HHsearch alignment for GI: 254780676 and conserved domain: PRK07360
>PRK07360 FO synthase subunit 2; Reviewed.
Probab=99.48 E-value=4e-12 Score=107.19 Aligned_cols=233 Identities=17% Similarity=0.187 Sum_probs=165.2
Q ss_pred CCEEECCCCCCCHHHHHCCCCEEEEEE-----CCCCCCCCCCCCCCCC--CCC--CCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 823652578878767508972699986-----6522353522344678--998--8882357999999997077518985
Q gi|254780676|r 66 LTTVCEEAGCPNIGECWNKNHATFMIL-----GAICTRACTFCNVATG--KPQ--PLDPQEPENISWAVRSMKLSHVVIT 136 (329)
Q Consensus 66 L~TVCeeA~CPNi~ECw~~gtATFMil-----G~~CTR~C~FC~V~~G--~P~--~~D~~EP~rvA~av~~l~Lk~vViT 136 (329)
T Consensus 37 l~~L~~~A~~vR-~~~~G-d~Vtfv~n~~In~TNiC~~~C~fCaF~r~p~~~~ay~ls~eEi~~~~~~a~~~G~tEv~~~ 114 (375)
T PRK07360 37 IFEILELADRLR-AEQVG-DTVTYVVNRNINFTNICEGHCGFCAFRRDKGDPGAFWLDIEEILEKAAEAVKAGATEVCIQ 114 (375)
T ss_pred HHHHHHHHHHHH-HHHCC-CEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 999999999999-98669-9699982526656179870898273407889976602789999999999986588089976
Q ss_pred CCCCCCCCC--CHHHHHHHHHHHHHHHCCCCEEEEECCC-------C--CCCHHHHHHHHHCCCHHHHH-CCC-CCCCCC
Q ss_conf 054453453--2589999999999853358689981546-------2--34468999874107023320-138-300027
Q gi|254780676|r 137 SVDRDDLDD--GGAQHFAEVISAIRESAPSTTIEVLTPD-------F--LRKPHALEKVVSAKPDVFNH-NLE-TVASNY 203 (329)
Q Consensus 137 SV~RDDL~D--gGA~hfa~~I~~Ir~~~P~~~IEvLiPD-------f--~G~~~al~~v~~A~pdV~nH-NiE-TV~rLy 203 (329)
T Consensus 115 gG~~P~l~~~~~~~~~y~~~~~~ik~~~p~i~i~a~s~~Ei~~~a~~~g~~~~e~l~~LkeAGl~s~pG~gaEil~~~vr 194 (375)
T PRK07360 115 GGLHPAADLNGSSLDFYLEILKAIKAEFPGIHLHAFSPQEVQFAAREDGLSYEEVLKALKDAGLDSMPGTAAEILDDEVR 194 (375)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 88783445464518999999999998689855640899999998866499889999999976987588876210345566
Q ss_pred CCCCCCC-HHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCE----EECCHHCCCCCCCCCCCC
Q ss_conf 5638970-35899999999997089167014048876420688999999999669939----975022278610078000
Q gi|254780676|r 204 LMVRPGA-RYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDF----LTMGQYLQPTRKHHKVES 278 (329)
Q Consensus 204 ~~VRp~a-~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdi----lTiGQYL~Ps~~h~pV~r 278 (329)
T Consensus 195 ~~i~P~K~~~~~wl~v~~~Ah~lG--i~ttatmL~Gh~Et~eerv~hL~~iR~lqd~tggf~efIp~~F~~~nt~l~~~~ 272 (375)
T PRK07360 195 RIICPEKITTAEWIEIVKTAHKLG--LPTTSTMMYGHIETPEHRIDHLSILREIQKETGGITEFIPLPFVHENAPLYERG 272 (375)
T ss_pred HCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 465989889999999999999829--970100261898999999999999998887449846997114358998500015
Q ss_pred CC--CHHHHHHHHHHHHHC----CC-CEEEC
Q ss_conf 23--846999999999974----96-24340
Q gi|254780676|r 279 FV--TPQDFKSYETIAYSK----GF-LMVSA 302 (329)
Q Consensus 279 yv--~P~eF~~~~~~a~~~----Gf-~~V~S 302 (329)
T Consensus 273 ~~~~~~~~~e~lk~~AvaRl~Ldn~i~~Iqa 303 (375)
T PRK07360 273 RVKRGAPGLEDLKLYAVSRIFLGNWIKNIQP 303 (375)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEC
T ss_conf 6788886698999999999983388876577