HHsearch alignment for GI: 254780676 and conserved domain: PRK08208
>PRK08208 coproporphyrinogen III oxidase; Validated.
Probab=97.74 E-value=0.0031 Score=44.48 Aligned_cols=213 Identities=11% Similarity=0.160 Sum_probs=130.8
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-----CEEEEECCCCCCCCCCH------HHHHHHHH
Q ss_conf 69998665223535223446789988882357999999997077-----51898505445345325------89999999
Q gi|254780676|r 87 ATFMILGAICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKL-----SHVVITSVDRDDLDDGG------AQHFAEVI 155 (329)
Q Consensus 87 ATFMilG~~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~L-----k~vViTSV~RDDL~DgG------A~hfa~~I 155 (329)
T Consensus 46 LsLYiHiPFC~~~C~YC~f~~~~~~~~~~~~-~Y~~aL~~Ei~~~~~~~~~~~~~tiy----~GGGTPS~L~~~~l~~ll 120 (436)
T PRK08208 46 LHLYIHIPFCESRCGFCNLFTCTGADNEFID-SYLDALIRQARQVALALGGVHFASFA----VGGGTPTLLNIAQLEKLF 120 (436)
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHCCCCCEEEEE----ECCCHHHCCCHHHHHHHH
T ss_conf 4999870440795889998376689833899-99999999999987663898356899----679432219999999999
Q ss_pred HHHHHHC---C---CCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCCC-
Q ss_conf 9998533---5---86899815462344689998741070233201383-00027563897035899999999997089-
Q gi|254780676|r 156 SAIRESA---P---STTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLET-VASNYLMVRPGARYFHSLRLLQRVKELDP- 227 (329)
Q Consensus 156 ~~Ir~~~---P---~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiET-V~rLy~~VRp~a~Y~rSL~vL~~aK~~~~- 227 (329)
T Consensus 121 ~~l~~~f~~~~~~~EiTiE~nP~~~--~~~~l~~l~~~GvNRiSlGVQsf~~~~L~~lgR~h~~~~~~~ai~~~r~~gf~ 198 (436)
T PRK08208 121 FSVFDVLGVDLWNIPKSVETSPTTT--TAEKLALLNAFGVNRVSIGVQSFHDSELHALHRRQNAASVHQALELIRAAHFP 198 (436)
T ss_pred HHHHHHCCCCCCCEEEEEEECCCCC--HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 9999858998467159998663636--09999999973987278741448989999846889999999999999981998
Q ss_pred EEEECCCEEEEE-EECHHHHHHHHHHHHHCCCCEEECCHH-CCCCCCCCCCCCCCCHHH---HHHHHHHHHHCCCCEEEC
Q ss_conf 167014048876-420688999999999669939975022-278610078000238469---999999999749624340
Q gi|254780676|r 228 LIFTKSGIMLGL-GETRNEILQLMDDLRTADVDFLTMGQY-LQPTRKHHKVESFVTPQD---FKSYETIAYSKGFLMVSA 302 (329)
Q Consensus 228 ~i~TKSGlMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQY-L~Ps~~h~pV~ryv~P~e---F~~~~~~a~~~Gf~~V~S 302 (329)
T Consensus 199 nin--iDLIyGlPgQt~~~~~~~l~~~l~l~p~HIS~Y~L~iep~T~l~~~~~~~~d~~~~my~~a~~~L~~~Gy~~Yei 276 (436)
T PRK08208 199 SLN--IDLIYGIPGQTHASFMESLHQALVYRPEELFLYPLYVRPLTGLGRRGTAWDDNMHSLYVLARDLLLNAGYTQTSM 276 (436)
T ss_pred EEE--EEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 575--524436999999999999999982798989876330478983012479893799999999999999769443348
Q ss_pred CCCCCC
Q ss_conf 483001
Q gi|254780676|r 303 SPLTRS 308 (329)
Q Consensus 303 gPlVRS 308 (329)
T Consensus 277 snFak~ 282 (436)
T PRK08208 277 RRFVRN 282 (436)
T ss_pred HHHCCC
T ss_conf 662089