HHsearch alignment for GI: 254780676 and conserved domain: PRK08898
>PRK08898 coproporphyrinogen III oxidase; Provisional.
Probab=97.50 E-value=0.0037 Score=43.93 Aligned_cols=210 Identities=11% Similarity=0.131 Sum_probs=124.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC--E---EEEECCCCCCCCCCH------HHHHHHHHHHHHHHC
Q ss_conf 52235352234467899888823579999999970775--1---898505445345325------899999999998533
Q gi|254780676|r 94 AICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKLS--H---VVITSVDRDDLDDGG------AQHFAEVISAIRESA 162 (329)
Q Consensus 94 ~~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~Lk--~---vViTSV~RDDL~DgG------A~hfa~~I~~Ir~~~ 162 (329)
T Consensus 27 PFC~~~C~YC~f~s~~~~~~~~~~~~Y~~aL~~Ei~~~~~~~~~~~~~tiy----~GGGTPs~L~~~~l~~l~~~l~~~f 102 (393)
T PRK08898 27 PWCVRKCPYCDFNSHEWKGGGIPEAAYLDALRADLEQALPLVWGRQVHTVF----IGGGTPSLLSAAGLDRLLSDVRALL 102 (393)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE----ECCCHHHHCCHHHHHHHHHHHHHHC
T ss_conf 787160999988142278788679999999999999757770698677999----7684246389999999999999858
Q ss_pred C-----CCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEE
Q ss_conf 5-----868998154623446899987410702332013830-0027563897035899999999997089167014048
Q gi|254780676|r 163 P-----STTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIM 236 (329)
Q Consensus 163 P-----~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlM 236 (329)
T Consensus 103 ~~~~~~E~tiE~n-P~~~-~~~~l~~l~~~GvnRiSlGVQsf~~~~l~~lgR~h~~~~~~~~i~~~~~~f~~in--iDLi 178 (393)
T PRK08898 103 PLDPDAEITLEAN-PGTF-EAEKFAQFRASGVNRLSIGIQSFNDAHLKALGRIHDGAEARAAIEIAAKHFDNFN--LDLM 178 (393)
T ss_pred CCCCCCEEEEEEC-CCCC-CHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC--CHHH
T ss_conf 9765731688736-2506-0999999985498648995202899999981899999999999999997374667--2898
Q ss_pred EEE-EECHHHHHHHHHHHHHCCCCEEECCHHC-CC-CCCCCCCCCCCCHHH-HH---HHHHHHHHCCCCEEECCCCCCCC
Q ss_conf 876-4206889999999996699399750222-78-610078000238469-99---99999997496243404830010
Q gi|254780676|r 237 LGL-GETRNEILQLMDDLRTADVDFLTMGQYL-QP-TRKHHKVESFVTPQD-FK---SYETIAYSKGFLMVSASPLTRSS 309 (329)
Q Consensus 237 vGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL-~P-s~~h~pV~ryv~P~e-F~---~~~~~a~~~Gf~~V~SgPlVRSS 309 (329)
T Consensus 179 yGlP~Qt~~~~~~~l~~~~~l~p~hiS~Y~L~iep~T~~~~~~~~lP~~d~~~~m~~~~~~~L~~~GY~~yeisnFAkpg 258 (393)
T PRK08898 179 YALPNQTLDECRADVETALAFGPPHLSLYHLTLEPNTLFAKFPPALPDDDASADMQDWIHARLAAAGYAHYETSAYAKPG 258 (393)
T ss_pred HCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCC
T ss_conf 35988989999999999862499958987777648973321576795989999999999999997699828725423478
Q ss_pred HH
Q ss_conf 31
Q gi|254780676|r 310 YH 311 (329)
Q Consensus 310 Y~ 311 (329)
T Consensus 259 ~~ 260 (393)
T PRK08898 259 RQ 260 (393)
T ss_pred CH
T ss_conf 45