HHsearch alignment for GI: 254780676 and conserved domain: PRK09057
>PRK09057 coproporphyrinogen III oxidase; Provisional.
Probab=97.45 E-value=0.0024 Score=45.29 Aligned_cols=210 Identities=13% Similarity=0.190 Sum_probs=127.2
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHC-----CCEEEEECCCCCCCCCC------HHHHHHHHHHHHHH
Q ss_conf 6522353522344678-998888235799999999707-----75189850544534532------58999999999985
Q gi|254780676|r 93 GAICTRACTFCNVATG-KPQPLDPQEPENISWAVRSMK-----LSHVVITSVDRDDLDDG------GAQHFAEVISAIRE 160 (329)
Q Consensus 93 G~~CTR~C~FC~V~~G-~P~~~D~~EP~rvA~av~~l~-----Lk~vViTSV~RDDL~Dg------GA~hfa~~I~~Ir~ 160 (329)
T Consensus 11 IPFC~~~C~YCdf~~~~~~~~~~~~~--Y~~~L~~Ei~~~~~~~~~~~i~tiy----~GGGTPs~L~~~~l~~ll~~l~~ 84 (381)
T PRK09057 11 WPFCLAKCPYCDFNSHVRHAPIDQAR--FAAAFLRELATEAARTGPRTLTSIF----FGGGTPSLMQPETVAALLDAIAR 84 (381)
T ss_pred ECCCCCCCCCCCCCCEECCCCCCHHH--HHHHHHHHHHHHHHHCCCCCEEEEE----ECCCHHHCCCHHHHHHHHHHHHH
T ss_conf 17888828999498701788787999--9999999999999875999357999----79961230999999999999998
Q ss_pred H-----CCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf 3-----35868998154623446899987410702332013830-00275638970358999999999970891670140
Q gi|254780676|r 161 S-----APSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSG 234 (329)
Q Consensus 161 ~-----~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSG 234 (329)
T Consensus 85 ~f~~~~~~EiTiE~nP~~~--~~~~l~~l~~~GvnRiSlGVQsf~~~~l~~lgR~h~~~~~~~ai~~~r~~f~~in--~D 160 (381)
T PRK09057 85 LWPVADDIEITLEANPTSV--EAGRFRGYRAAGVNRVSLGVQALNDADLRFLGRLHSVAEALAAIDLAREIFPRVS--FD 160 (381)
T ss_pred HCCCCCCCEEEEECCHHHC--CHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC--HH
T ss_conf 6798657236772374220--1679999997098769896234999999973899989999999999998654512--06
Q ss_pred EEEEE-EECHHHHHHHHHHHHHCCCCEEECCHH-CCCCCC-CC--CCCCCCCHH------HHHHHHHHHHHCCCCEEECC
Q ss_conf 48876-420688999999999669939975022-278610-07--800023846------99999999997496243404
Q gi|254780676|r 235 IMLGL-GETRNEILQLMDDLRTADVDFLTMGQY-LQPTRK-HH--KVESFVTPQ------DFKSYETIAYSKGFLMVSAS 303 (329)
Q Consensus 235 lMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQY-L~Ps~~-h~--pV~ryv~P~------eF~~~~~~a~~~Gf~~V~Sg 303 (329)
T Consensus 161 LiyGlPgQt~~~~~~~l~~~~~l~p~hiS~Y~L~~e~~t~~~~~~~~g~~~~p~~d~~~~~y~~~~~~L~~~Gy~~YEiS 240 (381)
T PRK09057 161 LIYARPGQTLAAWRAELKEALGLAADHLSLYQLTIEEGTAFYGLHAAGKLTLPDEDLAADLYELTQEVTAAAGLPAYEIS 240 (381)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECC
T ss_conf 64279889888999999999712777432235664489727878755888999999999999999999996798743246
Q ss_pred CCCCCCHHH
Q ss_conf 830010318
Q gi|254780676|r 304 PLTRSSYHA 312 (329)
Q Consensus 304 PlVRSSY~A 312 (329)
T Consensus 241 nfAkpg~~s 249 (381)
T PRK09057 241 NHARPGAES 249 (381)
T ss_pred CCCCCCCHH
T ss_conf 546897321