HHsearch alignment for GI: 254780676 and conserved domain: PRK13347
>PRK13347 coproporphyrinogen III oxidase; Provisional.
Probab=97.72 E-value=0.0048 Score=43.11 Aligned_cols=213 Identities=14% Similarity=0.235 Sum_probs=135.0
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC------EEEEECCCCCCCCCCH------HHHHHH
Q ss_conf 2699986652235352234467899888823579999999970775------1898505445345325------899999
Q gi|254780676|r 86 HATFMILGAICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKLS------HVVITSVDRDDLDDGG------AQHFAE 153 (329)
Q Consensus 86 tATFMilG~~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~Lk------~vViTSV~RDDL~DgG------A~hfa~ 153 (329)
T Consensus 50 plsLYiHIPFC~~~C~YC~f~~~~~~~~~~~~-~Yl~~L~~Ei~~~~~~~~~~~~v~ti~----~GGGTPs~L~~~~l~~ 124 (453)
T PRK13347 50 PVSLYLHVPFCRSLCWFCGCNTIITQRDAPVE-AYVAALIREIRLVAALLPQRRRVSQLH----WGGGTPTILNPDQFER 124 (453)
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHHHHHHHCCCCEEEEEE----ECCCCHHHCCHHHHHH
T ss_conf 86999852771680899989733778866799-999999999999887627898078999----7884828599999999
Q ss_pred HHHHHHHHC-----CCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 999998533-----586899815462344689998741070233201383-00027563897035899999999997089
Q gi|254780676|r 154 VISAIRESA-----PSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLET-VASNYLMVRPGARYFHSLRLLQRVKELDP 227 (329)
Q Consensus 154 ~I~~Ir~~~-----P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiET-V~rLy~~VRp~a~Y~rSL~vL~~aK~~~~ 227 (329)
T Consensus 125 ll~~l~~~f~~~~~~EitiE~nP~~~--~~~~l~~l~~~GvNRlSlGVQsfd~~vl~~lgR~h~~~~~~~av~~ar~~Gf 202 (453)
T PRK13347 125 LMAALRDAFDFAPEAEIAVEIDPRTV--TAEMLQALAALGFNRASFGVQDFDPQVQKAINRIQPEEMVARAVELLRAAGF 202 (453)
T ss_pred HHHHHHHHCCCCCCCEEEEEECCCCC--CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999975899999669998677868--9999999986498658871345787899982598999999999999998189
Q ss_pred -EEEECCCEEEEE-EECHHHHHHHHHHHHHCCCCEEECCHHCC-CCCCCCCCCCCC------CHH-H---HHHHHHHHHH
Q ss_conf -167014048876-42068899999999966993997502227-861007800023------846-9---9999999997
Q gi|254780676|r 228 -LIFTKSGIMLGL-GETRNEILQLMDDLRTADVDFLTMGQYLQ-PTRKHHKVESFV------TPQ-D---FKSYETIAYS 294 (329)
Q Consensus 228 -~i~TKSGlMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL~-Ps~~h~pV~ryv------~P~-e---F~~~~~~a~~ 294 (329)
T Consensus 203 ~~in--iDLIyGlP~QT~~~~~~tL~~~~~l~pdhiS~Y~l~~~p~~~--~~qr~i~~~~LP~~~~~~~m~~~a~~~L~~ 278 (453)
T PRK13347 203 ESIN--FDLIYGLPHQTVESFRETLDKVIALSPDRIAVFGYAHVPSRR--KNQRLIDEAALPDAEERLRQARAAADRLLA 278 (453)
T ss_pred CCEE--EEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH--HHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8655--555524899989999999999983199978852320265323--565325767895999999999999999996
Q ss_pred CCCCEEECCCCCCCC
Q ss_conf 496243404830010
Q gi|254780676|r 295 KGFLMVSASPLTRSS 309 (329)
Q Consensus 295 ~Gf~~V~SgPlVRSS 309 (329)
T Consensus 279 ~GY~~y~i~~FAkp~ 293 (453)
T PRK13347 279 AGYVPIGLDHFALPD 293 (453)
T ss_pred CCCEEEECHHHCCCC
T ss_conf 793895143303896