HHsearch alignment for GI: 254780676 and conserved domain: TIGR01125

>TIGR01125 TIGR01125 MiaB-like tRNA modifying enzyme YliG, TIGR01125; InterPro: IPR005840 This is a family of mainly hypothetical proteins of unknown function. .
Probab=97.22  E-value=0.031  Score=37.42  Aligned_cols=176  Identities=19%  Similarity=0.333  Sum_probs=131.3

Q ss_pred             EEEECCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHCCCEEEE----ECCCCCCCC-----CCHH---HHHHHH
Q ss_conf             9986652235352234467--8998888235799999999707751898----505445345-----3258---999999
Q gi|254780676|r   89 FMILGAICTRACTFCNVAT--GKPQPLDPQEPENISWAVRSMKLSHVVI----TSVDRDDLD-----DGGA---QHFAEV  154 (329)
Q Consensus        89 FMilG~~CTR~C~FC~V~~--G~P~~~D~~EP~rvA~av~~l~Lk~vVi----TSV~RDDL~-----DgGA---~hfa~~  154 (329)
T Consensus       167 YlKvaEGC~~~CaFCiIP~~rG~~rSR~ie~i~~Ea~~L~~~GvKEiiliaQDTt~YG~DL~~R~~~~~~e~v~~~L~~L  246 (475)
T TIGR01125       167 YLKVAEGCNRRCAFCIIPSLRGKLRSRPIEEILKEAKRLVDQGVKEIILIAQDTTAYGVDLYTRESEFDGEQVKSKLVEL  246 (475)
T ss_pred             EEEECCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf             68700577898652136233677677688889999999984398389999640347764111105522401457899999


Q ss_pred             HHHHHHHCC--CCEEEEECCCCCCCHHHHHHHHHCCCHHH-------HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             999985335--86899815462344689998741070233-------201383000275638970358999999999970
Q gi|254780676|r  155 ISAIRESAP--STTIEVLTPDFLRKPHALEKVVSAKPDVF-------NHNLETVASNYLMVRPGARYFHSLRLLQRVKEL  225 (329)
Q Consensus       155 I~~Ir~~~P--~~~IEvLiPDf~G~~~al~~v~~A~pdV~-------nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~  225 (329)
T Consensus       247 l~~L~k~~G~~WiR~~YlYP~--~~~~~vI~~m~~~~KvLPYlDiPLQH---~sd~ILK~M~R~~~~~~~~~~i~~~R~~  321 (475)
T TIGR01125       247 LEELGKLGGIYWIRLLYLYPD--ELTDDVIDLMAEGPKVLPYLDIPLQH---ASDRILKLMRRPGSGEEQLDLIERLREK  321 (475)
T ss_pred             HHHHHHCCCCCEEEEEEECCC--CCCHHHHHHHHCCCCCCCEECCCCCC---CCHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf             997400589622788876088--88667889986389805122543123---8737874278996388999999999975


Q ss_pred             CCEEEECCCEEEEE-EECHHHHHHHHHHHHHCCCCEEECCHHCCC
Q ss_conf             89167014048876-420688999999999669939975022278
Q gi|254780676|r  226 DPLIFTKSGIMLGL-GETRNEILQLMDDLRTADVDFLTMGQYLQP  269 (329)
Q Consensus       226 ~~~i~TKSGlMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL~P  269 (329)
T Consensus       322 ~P~~vlRttfIVGFPGETEEdF~eL~~Fv~e~~~D~lG~F~YS~e  366 (475)
T TIGR01125       322 VPDAVLRTTFIVGFPGETEEDFQELLDFVEEGQFDRLGVFTYSPE  366 (475)
T ss_pred             CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             566177224688688998788999999985202150000207832