HHsearch results for GI: 254780676 and protein with PDBid: 3c8f_A
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=98.11 E-value=2.9e-05 Score=57.21 Aligned_cols=205 Identities=13% Similarity=0.187 Sum_probs=121.3
Q ss_pred CEEEEEECCCCCCCCCCCCCC----CCCCCCCCHHHH-HHHHHHHHHH--CCCEEEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 269998665223535223446----789988882357-9999999970--775189850544534532589999999999
Q gi|254780676|r 86 HATFMILGAICTRACTFCNVA----TGKPQPLDPQEP-ENISWAVRSM--KLSHVVITSVDRDDLDDGGAQHFAEVISAI 158 (329)
Q Consensus 86 tATFMilG~~CTR~C~FC~V~----~G~P~~~D~~EP-~rvA~av~~l--~Lk~vViTSV~RDDL~DgGA~hfa~~I~~I 158 (329)
.+.|+- -|--+|.||... .....+++.+|- ..+.+..+.+ +...|.+|. =+-+. -.....+.++.+
T Consensus 22 ~~vf~~---GCN~~C~~C~n~~~~~~~~~~~~~~~e~~~ei~~~~~~~~~~~~~v~~sG--GEP~l--~~~~l~~l~~~~ 94 (245)
T 3c8f_A 22 FITFFQ---GCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASG--GEAIL--QAEFVRDWFRAC 94 (245)
T ss_dssp EEEEES---CCSCCCTTCSCGGGCCTTCSEEECHHHHHHHHGGGHHHHTSTTCEEEEEE--SCGGG--GHHHHHHHHHHH
T ss_pred EEEECC---CCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCC--CCCCC--CHHHHHHHHHHH
T ss_conf 999878---74788989997134186799188999999999999997525787585355--56534--699999999988
Q ss_pred HHHCCCCEEEEECCCCC-CCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEE
Q ss_conf 85335868998154623-446899987410702332013830-0027563897035899999999997089167014048
Q gi|254780676|r 159 RESAPSTTIEVLTPDFL-RKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIM 236 (329)
Q Consensus 159 r~~~P~~~IEvLiPDf~-G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlM 236 (329)
|+....+.++ +-.+. ...+.++.+.. ..|.++-.+... +..|..++ +.++++-|+.|+.+++.+..+...+=+|
T Consensus 95 k~~g~~~~l~--TnG~~~~~~~~~~~l~~-~~d~v~id~~~~~~~~~~~~~-g~~~~~vl~~l~~l~~~g~~v~i~~~~i 170 (245)
T 3c8f_A 95 KKEGIHTCLD--TNGFVRRYDPVIDELLE-VTDLVMLDLKQMNDEIHQNLV-GVSNHRTLEFAKYLANKNVKVWIRYVVV 170 (245)
T ss_dssp HTTTCCEEEE--ECCCCCCCCHHHHHHHH-TCSEEEEECCCSSHHHHHHHH-SSCSHHHHHHHHHHHHHTCCEEEEEEEC
T ss_pred HHHCCCEEEE--CCCCCCCCHHHHHHHHC-CCCEEEEECCCCCHHHHHHHH-CCCCHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 8643847997--78865553456666523-575799843546788999873-8650899999999997899899999998
Q ss_pred EEEEECHHHHHHHHHHHHHCC-CCEEECCHHCCCCCCC-------CCC--CCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 876420688999999999669-9399750222786100-------780--0023846999999999974962434
Q gi|254780676|r 237 LGLGETRNEILQLMDDLRTAD-VDFLTMGQYLQPTRKH-------HKV--ESFVTPQDFKSYETIAYSKGFLMVS 301 (329)
Q Consensus 237 vGLGEt~eEi~e~l~DLr~~g-vdilTiGQYL~Ps~~h-------~pV--~ryv~P~eF~~~~~~a~~~Gf~~V~ 301 (329)
-|+-.++|++.++.+-+++.+ ++.+.|-+|-+-...+ ++. .+-.++++.+++++++.+.|++.|.
T Consensus 171 ~g~~d~~e~i~~i~~~i~~l~~~~~v~l~py~~~g~~k~~~~~~~y~~~~~~~p~~e~l~~~~~~~~~~G~~V~~ 245 (245)
T 3c8f_A 171 PGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKVMF 245 (245)
T ss_dssp TTTTCCHHHHHHHHHHHHHHCCEEEEEEEECCCCSHHHHHHTTCCCTTTTCCCCCHHHHHHHHHHHHTTTCCBCC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEC
T ss_conf 994899999999999998579975588844761664116651854544578999999999999999985990679