HHsearch results for GI: 254780676 and protein with PDBid: 3ivs_A

>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensation, amino-acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=92.90  E-value=0.64  Score=26.59  Aligned_cols=144  Identities=11%  Similarity=-0.005  Sum_probs=94.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCC
Q ss_conf             98888235799999999707751898505445345325899999999998533586899815462344689998741070
Q gi|254780676|r  110 PQPLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKP  189 (329)
Q Consensus       110 P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~p  189 (329)
                      ....+.+|-.++|++..++|.+++=+.+...      + ....+.+++|.+......+-..   .+.+.+.++..++++.
T Consensus        55 g~~fs~e~K~~i~~~L~~~GV~~IEvG~p~~------~-~~~~~~~~~i~~~~~~~~~~~~---~r~~~~d~~~a~~~g~  124 (423)
T 3ivs_A           55 NAFFDTEKKIQIAKALDNFGVDYIELTSPVA------S-EQSRQDCEAICKLGLKCKILTH---IRCHMDDARVAVETGV  124 (423)
T ss_dssp             TCCCCHHHHHHHHHHHHHHTCSEEEECCTTS------C-HHHHHHHHHHHTSCCSSEEEEE---EESCHHHHHHHHHTTC
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCEEEEECCCC------C-HHHHHHHHHHHHHCCHHHHHHH---HHCCHHHHHHHHHCCC
T ss_conf             9998999999999999981979899966847------8-3679999999870460353554---6438076999998698


Q ss_pred             HHHHHCCCCCCCCCCCC--C-CCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCH
Q ss_conf             23320138300027563--8-9703589999999999708916701404887642068899999999966993997502
Q gi|254780676|r  190 DVFNHNLETVASNYLMV--R-PGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQ  265 (329)
Q Consensus       190 dV~nHNiETV~rLy~~V--R-p~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQ  265 (329)
                      +.++--+-+.+.+-...  + .....+.-.++++++|+.|..+.  -++|-+-.-..+++.++++.+.++|+|.+.|.-
T Consensus       125 ~~v~i~~~~s~~~~~~~~~~~~~~~l~~~~~~v~~ak~~G~~V~--~~~ed~~~~~~~~l~~~~~~~~~~Gad~i~laD  201 (423)
T 3ivs_A          125 DGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVR--FSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIAD  201 (423)
T ss_dssp             SEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEE--EEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE--EEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             96899854529999998621299999999999988750586111--201445577689999999887613987135456