Query gi|254780676|ref|YP_003065089.1| lipoyl synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 329
No_of_seqs 137 out of 1373
Neff 3.9
Searched_HMMs 23785
Date Tue May 31 18:56:58 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780676.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r30_A Biotin synthase; SAM ra 99.9 1.6E-20 6.6E-25 165.1 15.9 200 87-294 67-273 (369)
2 3iix_A Biotin synthetase, puta 99.8 8.1E-18 3.4E-22 145.9 16.4 193 90-293 57-255 (348)
3 2qgq_A Protein TM_1862; alpha- 99.0 8.1E-08 3.4E-12 75.3 17.8 198 85-285 3-213 (304)
4 1olt_A Oxygen-independent copr 98.5 7E-06 3E-10 61.6 14.4 219 86-310 52-295 (457)
5 3c8f_A Pyruvate formate-lyase 98.1 2.9E-05 1.2E-09 57.2 10.3 205 86-301 22-245 (245)
6 2yx0_A Radical SAM enzyme; pre 98.0 0.00017 7.1E-09 51.9 12.4 198 94-301 79-313 (342)
7 1tv8_A MOAA, molybdenum cofact 97.9 0.00063 2.7E-08 47.8 13.6 190 92-292 20-223 (340)
8 2z2u_A UPF0026 protein MJ0257; 97.2 0.0036 1.5E-07 42.5 10.1 198 93-305 59-294 (311)
9 2a5h_A L-lysine 2,3-aminomutas 96.6 0.027 1.1E-06 36.3 10.4 201 66-277 95-304 (416)
10 1nvm_A HOA, 4-hydroxy-2-oxoval 94.7 0.31 1.3E-05 28.8 9.7 125 114-263 118-260 (345)
11 2iw0_A Chitin deacetylase; hyd 93.9 0.44 1.8E-05 27.7 9.0 180 52-272 54-243 (254)
12 3ivs_A Homocitrate synthase, m 92.9 0.64 2.7E-05 26.6 12.2 144 110-265 55-201 (423)
13 3no5_A Uncharacterized protein 90.5 1.1 4.8E-05 24.8 9.3 91 109-199 22-113 (275)
14 3chv_A Prokaryotic domain of u 89.5 1.3 5.7E-05 24.3 8.7 92 109-200 26-118 (284)
15 1q6o_A Humps, 3-keto-L-gulonat 87.5 1.8 7.6E-05 23.4 9.9 127 117-267 68-194 (216)
16 3can_A Pyruvate-formate lyase- 87.1 1.9 8E-05 23.2 14.8 150 114-301 17-180 (182)
17 2ztj_A Homocitrate synthase; ( 86.1 2.1 8.9E-05 22.9 9.7 140 112-263 21-163 (382)
18 2o55_A Putative glycerophospho 85.5 2.3 9.5E-05 22.7 10.8 125 104-262 114-242 (258)
19 3eeg_A 2-isopropylmalate synth 84.2 2.6 0.00011 22.3 10.2 143 113-264 25-171 (325)
20 2ftp_A Hydroxymethylglutaryl-C 82.5 3 0.00013 21.9 10.1 147 110-264 24-179 (302)
21 3ble_A Citramalate synthase fr 82.3 3 0.00013 21.8 9.7 159 112-289 37-204 (337)
22 1rqb_A Transcarboxylase 5S sub 80.2 3.6 0.00015 21.3 9.7 75 114-192 173-249 (539)
23 1zcc_A Glycerophosphodiester p 80.0 3.6 0.00015 21.3 7.5 124 118-295 114-238 (248)
24 1ny1_A Probable polysaccharide 77.2 4.3 0.00018 20.7 6.3 171 54-275 58-238 (240)
25 2vyo_A ECU11_0510, chitooligos 76.6 4.5 0.00019 20.6 5.6 165 54-270 41-219 (254)
26 2nx9_A Oxaloacetate decarboxyl 74.8 5 0.00021 20.3 8.7 74 114-192 156-230 (464)
27 1qpo_A Quinolinate acid phosph 73.8 5.3 0.00022 20.1 6.4 91 151-268 181-273 (284)
28 1wa3_A 2-keto-3-deoxy-6-phosph 70.9 6.1 0.00026 19.7 9.7 155 112-310 18-186 (205)
29 3inp_A D-ribulose-phosphate 3- 70.6 6.2 0.00026 19.6 6.2 117 113-251 37-155 (246)
30 1ydn_A Hydroxymethylglutaryl-C 70.3 6.3 0.00026 19.6 10.8 143 110-263 20-174 (295)
31 3c6c_A 3-keto-5-aminohexanoate 70.2 6.3 0.00026 19.6 8.2 141 110-258 41-204 (316)
32 1tqx_A D-ribulose-5-phosphate 69.6 6.1 0.00026 19.7 4.6 17 153-169 53-69 (227)
33 2j13_A Polysaccharide deacetyl 67.8 4.1 0.00017 20.8 3.4 165 55-270 71-245 (247)
34 2ehh_A DHDPS, dihydrodipicolin 66.0 7.6 0.00032 19.0 8.8 78 112-193 78-159 (294)
35 1hx0_A Alpha amylase (PPA); in 65.7 7.7 0.00032 18.9 6.6 24 45-68 70-93 (496)
36 3jr2_A Hexulose-6-phosphate sy 64.3 8.2 0.00034 18.8 7.2 126 118-268 72-198 (218)
37 3dxi_A Putative aldolase; TIM 64.1 8.2 0.00035 18.7 7.3 35 223-259 208-247 (320)
38 3mo4_A Alpha-1,3/4-fucosidase; 63.1 6.7 0.00028 19.3 3.8 51 109-162 60-127 (480)
39 3i3v_A Probable secreted solut 62.9 8.6 0.00036 18.6 4.3 120 144-264 19-168 (405)
40 1xky_A Dihydrodipicolinate syn 61.0 9.3 0.00039 18.4 8.0 188 112-320 90-293 (301)
41 2zxd_A Alpha-L-fucosidase, put 60.1 8.4 0.00035 18.7 3.8 20 119-138 155-174 (455)
42 3gza_A Putative alpha-L-fucosi 59.1 8.6 0.00036 18.6 3.7 45 242-295 295-340 (443)
43 2w70_A Biotin carboxylase; lig 58.9 10 0.00042 18.1 4.3 155 118-277 14-213 (449)
44 2uvj_A TOGB, ABC type periplas 58.3 9.8 0.00041 18.2 3.9 21 108-128 134-154 (408)
45 3fuc_A Purine nucleoside phosp 58.2 10 0.00043 18.0 4.3 165 71-266 49-222 (284)
46 1mld_A Malate dehydrogenase; o 58.0 10 0.00044 18.0 4.2 52 95-169 64-115 (314)
47 1pzg_A LDH, lactate dehydrogen 58.0 10 0.00044 18.0 4.8 33 139-171 100-132 (331)
48 3cfz_A UPF0100 protein MJ1186; 56.1 11 0.00045 17.9 3.8 51 148-201 16-69 (292)
49 3eyp_A Putative alpha-L-fucosi 56.0 8.3 0.00035 18.7 3.2 53 109-164 50-119 (469)
50 2vpq_A Acetyl-COA carboxylase; 55.9 11 0.00047 17.8 8.8 154 118-276 13-210 (451)
51 1izc_A Macrophomate synthase i 55.8 11 0.00047 17.8 5.6 155 120-291 54-239 (339)
52 1qop_A Tryptophan synthase alp 55.6 11 0.00048 17.7 6.6 55 113-167 28-97 (268)
53 2yxg_A DHDPS, dihydrodipicolin 54.7 12 0.00049 17.6 8.8 80 112-195 78-161 (289)
54 1w5q_A Delta-aminolevulinic ac 54.3 12 0.0005 17.6 6.0 192 114-321 64-335 (337)
55 3bh4_A Alpha-amylase; calcium, 54.1 12 0.0005 17.6 6.2 24 47-70 74-97 (483)
56 1qap_A Quinolinic acid phospho 53.3 12 0.00052 17.5 7.1 85 151-266 195-282 (296)
57 3k6v_A Solute-binding protein 52.9 13 0.00053 17.4 3.8 49 148-199 54-105 (354)
58 3mz2_A Glycerophosphoryl diest 52.2 13 0.00054 17.4 9.2 118 118-265 144-267 (292)
59 3cfx_A UPF0100 protein MA_0280 52.0 13 0.00054 17.4 4.1 46 148-196 16-63 (296)
60 2f06_A Conserved hypothetical 51.4 13 0.00055 17.3 5.0 81 222-306 62-142 (144)
61 1v93_A 5,10-methylenetetrahydr 50.3 14 0.00057 17.2 6.9 24 236-259 178-201 (296)
62 3noe_A DAP-A, dihydrodipicolin 49.8 14 0.00058 17.1 8.1 77 112-192 79-158 (292)
63 1jvn_A Glutamine, bifunctional 48.3 15 0.00062 17.0 3.8 83 113-198 277-370 (555)
64 3d0c_A Dihydrodipicolinate syn 47.8 15 0.00063 16.9 8.2 42 114-155 91-132 (314)
65 2wvv_A Alpha-L-fucosidase; alp 47.8 13 0.00055 17.3 3.2 52 110-164 75-140 (450)
66 1vkf_A Glycerol uptake operon 47.6 14 0.00059 17.1 3.3 104 145-250 39-168 (188)
67 2dh2_A 4F2 cell-surface antige 47.4 15 0.00063 16.9 5.6 17 149-165 152-168 (424)
68 2vc6_A MOSA, dihydrodipicolina 47.3 15 0.00064 16.9 9.0 77 112-191 78-157 (292)
69 3c2e_A Nicotinate-nucleotide p 46.7 15 0.00065 16.8 3.7 92 151-268 185-281 (294)
70 2vxh_A Chlorite dismutase; hem 46.7 15 0.00065 16.8 3.9 17 114-130 86-102 (251)
71 1rcu_A Conserved hypothetical 46.4 16 0.00066 16.8 7.0 86 77-175 5-92 (195)
72 2vyc_A Biodegradative arginine 45.6 3.8 0.00016 21.1 0.1 117 38-158 310-454 (755)
73 3lmz_A Putative sugar isomeras 45.4 16 0.00068 16.7 9.6 55 115-178 88-142 (257)
74 1vhc_A Putative KHG/KDPG aldol 45.1 16 0.00069 16.6 7.1 171 112-325 25-208 (224)
75 1hvx_A Alpha-amylase; hydrolas 45.0 16 0.00069 16.6 6.6 23 46-68 76-98 (515)
76 3cij_A UPF0100 protein AF_0094 44.9 16 0.00069 16.6 4.5 43 148-193 16-60 (295)
77 3obk_A Delta-aminolevulinic ac 44.7 17 0.0007 16.6 5.8 208 114-325 75-351 (360)
78 1eep_A Inosine 5'-monophosphat 44.5 17 0.0007 16.6 6.8 136 114-270 151-291 (404)
79 3kts_A Glycerol uptake operon 44.1 10 0.00043 18.1 2.1 92 120-222 21-126 (192)
80 3k01_A Acarbose/maltose bindin 43.0 18 0.00074 16.4 3.4 14 112-125 160-173 (412)
81 2vws_A YFAU, 2-keto-3-deoxy su 42.6 18 0.00075 16.4 4.6 130 120-266 30-178 (267)
82 1to3_A Putative aldolase YIHT; 42.5 18 0.00075 16.4 10.5 134 122-267 114-257 (304)
83 3blx_B Isocitrate dehydrogenas 42.2 18 0.00076 16.3 5.1 86 113-204 160-247 (354)
84 2cw6_A Hydroxymethylglutaryl-C 41.8 18 0.00077 16.3 5.0 14 56-69 31-44 (298)
85 2gnp_A Transcriptional regulat 41.8 18 0.00077 16.3 7.2 163 120-292 11-185 (266)
86 3exr_A RMPD (hexulose-6-phosph 41.4 18 0.00078 16.2 7.1 20 118-137 71-90 (221)
87 2nly_A BH1492 protein, diverge 41.1 17 0.00072 16.5 2.9 161 86-272 29-230 (245)
88 1gte_A Dihydropyrimidine dehyd 39.3 20 0.00084 16.0 14.5 241 55-314 501-804 (1025)
89 1ud2_A Amylase, alpha-amylase; 39.0 20 0.00084 16.0 7.1 22 47-68 76-97 (480)
90 1g5a_A Amylosucrase; glycosylt 38.6 20 0.00085 16.0 6.3 92 27-132 76-179 (628)
91 3k35_A Mono-ADP-ribosyltransfe 37.7 11 0.00044 18.0 1.4 53 51-104 92-145 (318)
92 2v6b_A L-LDH, L-lactate dehydr 37.5 21 0.00089 15.8 4.4 43 129-171 67-116 (304)
93 2i6t_A Ubiquitin-conjugating e 37.3 19 0.00079 16.2 2.6 41 131-171 79-125 (303)
94 3n6r_A Propionyl-COA carboxyla 36.8 7.6 0.00032 19.0 0.6 53 76-128 196-262 (681)
95 2ewd_A Lactate dehydrogenase,; 36.7 22 0.00091 15.8 4.8 42 130-171 73-121 (317)
96 3ctl_A D-allulose-6-phosphate 36.5 22 0.00092 15.7 4.9 127 117-267 68-199 (231)
97 1jcn_A Inosine monophosphate d 36.4 22 0.00092 15.7 7.3 138 115-273 254-396 (514)
98 2pcq_A Putative dihidrodipicol 35.4 23 0.00096 15.6 5.6 75 112-193 71-150 (283)
99 3e96_A Dihydrodipicolinate syn 35.2 23 0.00096 15.6 9.0 45 114-158 91-136 (316)
100 2ka6_B Signal transducer and a 35.0 16 0.00068 16.7 2.0 32 267-302 12-43 (45)
101 1t2d_A LDH-P, L-lactate dehydr 35.0 23 0.00097 15.6 4.8 59 95-171 68-126 (322)
102 1ub0_A THID, phosphomethylpyri 34.8 23 0.00097 15.6 3.2 133 123-262 23-171 (258)
103 3nn1_A Chlorite dismutase; fer 34.8 17 0.0007 16.6 2.0 81 233-324 68-157 (241)
104 1g94_A Alpha-amylase; beta-alp 34.6 23 0.00098 15.5 6.4 25 46-70 59-83 (448)
105 3paj_A Nicotinate-nucleotide p 34.2 24 0.00099 15.5 8.6 85 151-266 218-305 (320)
106 2yxt_A Pyridoxal kinase; beta 33.8 24 0.001 15.4 3.9 52 113-167 57-110 (312)
107 3flu_A DHDPS, dihydrodipicolin 33.6 24 0.001 15.4 8.7 77 112-192 85-164 (297)
108 2bdq_A Copper homeostasis prot 33.3 24 0.001 15.4 5.4 23 246-268 135-158 (224)
109 1hyh_A L-hicdh, L-2-hydroxyiso 32.8 25 0.001 15.3 4.6 43 129-171 69-122 (309)
110 1wbh_A KHG/KDPG aldolase; lyas 32.7 25 0.0011 15.3 7.1 170 112-325 24-207 (214)
111 3gnn_A Nicotinate-nucleotide p 32.4 25 0.0011 15.3 5.3 87 151-268 196-285 (298)
112 2r91_A 2-keto-3-deoxy-(6-phosp 32.0 26 0.0011 15.2 10.2 45 113-157 74-120 (286)
113 1a9x_A Carbamoyl phosphate syn 31.8 13 0.00053 17.4 1.0 10 288-297 701-710 (1073)
114 1lld_A L-lactate dehydrogenase 31.6 26 0.0011 15.2 3.7 34 138-171 91-124 (319)
115 1a5z_A L-lactate dehydrogenase 31.6 26 0.0011 15.2 3.7 43 129-171 67-116 (319)
116 1oju_A MDH, malate dehydrogena 31.4 26 0.0011 15.2 3.5 34 138-171 85-118 (294)
117 1qwg_A PSL synthase;, (2R)-pho 30.0 28 0.0012 15.0 3.5 13 123-135 92-104 (251)
118 1y6j_A L-lactate dehydrogenase 29.8 28 0.0012 15.0 3.6 43 129-171 74-123 (318)
119 2zkr_o 60S ribosomal protein L 29.6 16 0.00066 16.8 1.2 93 229-326 79-184 (188)
120 3lab_A Putative KDPG (2-keto-3 28.5 29 0.0012 14.8 7.1 177 112-326 21-211 (217)
121 1ur5_A Malate dehydrogenase; o 28.5 29 0.0012 14.8 4.0 43 129-171 70-119 (309)
122 1ldn_A L-lactate dehydrogenase 28.2 30 0.0012 14.8 4.8 43 129-171 74-123 (316)
123 1smk_A Malate dehydrogenase, g 28.2 30 0.0012 14.8 4.3 180 129-319 76-320 (326)
124 3gr7_A NADPH dehydrogenase; fl 28.0 30 0.0013 14.8 6.4 87 109-195 130-249 (340)
125 1ydo_A HMG-COA lyase; TIM-barr 27.9 30 0.0013 14.8 10.2 143 112-264 24-177 (307)
126 2nx2_A Hypothetical protein YP 27.9 30 0.0013 14.8 4.3 43 127-176 41-83 (181)
127 1t70_A Phosphatase; crystal, X 27.8 28 0.0012 15.0 2.2 10 182-191 51-60 (255)
128 3f4w_A Putative hexulose 6 pho 27.7 30 0.0013 14.7 7.9 130 117-271 65-194 (211)
129 1a53_A IGPS, indole-3-glycerol 27.4 30 0.0013 14.7 10.7 187 52-270 31-238 (247)
130 1t71_A Phosphatase, conserved; 27.4 28 0.0012 14.9 2.2 14 124-137 29-42 (281)
131 3ouz_A Biotin carboxylase; str 27.3 31 0.0013 14.7 7.2 69 194-268 130-208 (446)
132 2hmc_A AGR_L_411P, dihydrodipi 27.3 31 0.0013 14.7 5.1 93 54-157 46-148 (344)
133 2d4a_B Malate dehydrogenase; a 27.1 31 0.0013 14.7 3.9 43 129-171 67-116 (308)
134 3czg_A Sucrose hydrolase; (alp 27.0 31 0.0013 14.7 5.7 20 114-133 154-173 (644)
135 1mxs_A KDPG aldolase; 2-keto-3 27.0 31 0.0013 14.7 8.1 171 112-325 34-217 (225)
136 1ht6_A AMY1, alpha-amylase iso 26.7 31 0.0013 14.6 5.8 21 48-68 65-85 (405)
137 7mdh_A Protein (malate dehydro 26.6 31 0.0013 14.6 3.1 42 128-169 107-156 (375)
138 1jxh_A Phosphomethylpyrimidine 26.5 32 0.0013 14.6 4.1 135 122-263 46-197 (288)
139 3cit_A Sensor histidine kinase 26.4 7.1 0.0003 19.2 -1.0 16 95-110 36-51 (160)
140 1u83_A Phosphosulfolactate syn 25.8 32 0.0014 14.5 3.6 11 54-64 52-62 (276)
141 2w7y_A FCSSBP, probable sugar 25.8 32 0.0014 14.5 4.5 61 133-193 40-104 (430)
142 2fli_A Ribulose-phosphate 3-ep 25.5 33 0.0014 14.5 4.5 43 117-167 72-114 (220)
143 3dz1_A Dihydrodipicolinate syn 25.5 33 0.0014 14.5 8.1 85 112-199 85-173 (313)
144 3bul_A Methionine synthase; tr 25.4 33 0.0014 14.5 2.8 33 270-306 389-421 (579)
145 1geq_A Tryptophan synthase alp 25.3 33 0.0014 14.5 5.4 43 216-267 180-223 (248)
146 2guy_A Alpha-amylase A; (beta- 25.1 33 0.0014 14.4 4.8 13 255-267 321-333 (478)
147 2hjr_A Malate dehydrogenase; m 25.1 33 0.0014 14.4 4.8 41 130-170 83-130 (328)
148 1o6z_A MDH, malate dehydrogena 25.0 34 0.0014 14.4 3.6 33 138-170 86-118 (303)
149 2v5j_A 2,4-dihydroxyhept-2-ENE 25.0 34 0.0014 14.4 5.6 129 120-266 51-199 (287)
150 1ccw_A Protein (glutamate muta 24.8 34 0.0014 14.4 2.7 55 131-192 4-58 (137)
151 2v65_A LDH-A, L-lactate dehydr 24.6 34 0.0014 14.4 3.7 43 129-171 87-136 (331)
152 3d0o_A L-LDH 1, L-lactate dehy 24.5 34 0.0014 14.4 3.7 43 129-171 74-123 (317)
153 2v9d_A YAGE; dihydrodipicolini 24.5 34 0.0014 14.4 8.3 79 112-193 109-190 (343)
154 1vdh_A Muconolactone isomerase 24.5 27 0.0011 15.1 1.7 43 239-286 79-124 (249)
155 2rhq_A Phenylalanyl-tRNA synth 24.4 13 0.00054 17.4 -0.0 127 52-211 57-205 (294)
156 2z1n_A Dehydrogenase; reductas 24.0 35 0.0015 14.3 6.2 27 265-291 212-238 (260)
157 1kcz_A Beta-methylaspartase; b 23.9 35 0.0015 14.3 11.6 103 151-259 254-381 (413)
158 2hk0_A D-psicose 3-epimerase; 23.9 35 0.0015 14.3 10.3 82 50-161 64-156 (309)
159 2e7y_A TRNAse Z; tRNA maturati 23.8 35 0.0015 14.3 6.1 15 287-301 227-241 (280)
160 1vhn_A Putative flavin oxidore 23.7 35 0.0015 14.3 8.4 131 116-268 68-217 (318)
161 3bdk_A D-mannonate dehydratase 23.6 36 0.0015 14.2 4.1 31 240-275 305-335 (386)
162 1o4u_A Type II quinolic acid p 23.5 36 0.0015 14.2 3.4 181 54-268 59-272 (285)
163 3bg3_A Pyruvate carboxylase, m 23.5 36 0.0015 14.2 5.4 26 151-176 292-317 (718)
164 3hhp_A Malate dehydrogenase; M 23.2 36 0.0015 14.2 3.1 41 129-169 69-116 (312)
165 3k17_A LIN0012 protein; protei 23.0 22 0.00094 15.7 1.0 57 218-274 300-361 (365)
166 3ewb_X 2-isopropylmalate synth 22.7 37 0.0016 14.1 11.0 146 110-264 21-170 (293)
167 2nuw_A 2-keto-3-deoxygluconate 22.7 37 0.0016 14.1 5.2 45 113-157 75-121 (288)
168 2w6r_A Imidazole glycerol phos 22.4 37 0.0016 14.1 5.2 71 117-193 31-101 (266)
169 3hgj_A Chromate reductase; TIM 22.3 38 0.0016 14.1 8.6 148 110-268 139-322 (349)
170 2v7p_A L-lactate dehydrogenase 22.3 38 0.0016 14.1 4.8 34 138-171 83-116 (310)
171 1uxc_A FRUR (1-57), fructose r 22.2 18 0.00078 16.2 0.4 48 249-300 2-50 (65)
172 3cyv_A URO-D, UPD, uroporphyri 22.2 38 0.0016 14.1 2.6 142 179-328 191-353 (354)
173 3kjx_A Transcriptional regulat 22.1 25 0.0011 15.3 1.1 12 247-258 260-271 (344)
174 1z41_A YQJM, probable NADH-dep 21.8 38 0.0016 14.0 6.4 56 109-164 130-210 (338)
175 1x0l_A Homoisocitrate dehydrog 21.8 38 0.0016 14.0 6.5 61 113-173 141-203 (333)
176 2hfq_A Hypothetical protein; A 21.5 36 0.0015 14.2 1.8 27 94-129 71-97 (109)
177 3l0g_A Nicotinate-nucleotide p 21.4 39 0.0016 13.9 3.9 176 54-268 70-283 (300)
178 1gpj_A Glutamyl-tRNA reductase 21.2 40 0.0017 13.9 2.4 45 217-264 153-197 (404)
179 3mbh_A Putative phosphomethylp 21.1 40 0.0017 13.9 3.4 22 242-263 163-184 (291)
180 1h1y_A D-ribulose-5-phosphate 21.1 40 0.0017 13.9 6.8 117 113-251 16-134 (228)
181 2ldx_A APO-lactate dehydrogena 21.1 40 0.0017 13.9 3.1 43 129-171 87-136 (331)
182 2epl_X N-acetyl-beta-D-glucosa 21.1 40 0.0017 13.9 7.1 21 115-135 101-121 (627)
183 2fqm_A Phosphoprotein, P prote 20.9 4.3 0.00018 20.8 -3.0 25 64-94 38-62 (75)
184 3khj_A Inosine-5-monophosphate 20.8 40 0.0017 13.9 6.3 136 115-272 104-244 (361)
185 3dlu_A SRP19, signal recogniti 20.6 41 0.0017 13.8 4.3 17 119-135 35-51 (106)
186 1v0w_A Phospholipase D; hydrol 20.3 41 0.0017 13.8 3.3 54 119-175 69-123 (506)
187 3gvi_A Malate dehydrogenase; N 20.1 42 0.0017 13.8 4.0 34 138-171 91-124 (324)
No 1
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=99.86 E-value=1.6e-20 Score=165.05 Aligned_cols=200 Identities=17% Similarity=0.245 Sum_probs=156.6
Q ss_pred EEEEEECCCCCCCCCCCCCCC----CCCC--CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 699986652235352234467----8998--8882357999999997077518985054453453258999999999985
Q gi|254780676|r 87 ATFMILGAICTRACTFCNVAT----GKPQ--PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRE 160 (329)
Q Consensus 87 ATFMilG~~CTR~C~FC~V~~----G~P~--~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~ 160 (329)
..|-|.-+.|+.+|.||+... +.+. ..+++|-...|+..+.+|.+.+.|.+-... ..|.....+.+.|+.|++
T Consensus 67 ~iin~~Tn~C~~~C~FCafs~~~~~~~~~~~l~s~eeI~e~a~~~~~~G~~~i~l~~g~~~-~~~~~~~~~~~~i~~i~~ 145 (369)
T 1r30_A 67 TLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKN-PHERDMPYLEQMVQGVKA 145 (369)
T ss_dssp EEEEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHHTTCSEEEEEECCSS-CCTTTHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCC-CCCCHHHHHHHHHHHHHH
T ss_conf 6877558999988922997341899987546688799999999898759979999957888-870279999999998520
Q ss_pred HCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEE
Q ss_conf 33586899815462344689998741070233201383000275638970358999999999970891670140488764
Q gi|254780676|r 161 SAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLG 240 (329)
Q Consensus 161 ~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLG 240 (329)
..+.+.+.+-.. ..+.++.+.+||.+.++||+||.+++++.++++.+|++.+++++.++++| +.+.+|+|+|+|
T Consensus 146 ~~~~i~~~~~~l----~~e~l~~Lk~aG~~~~~~~lEt~~~~~~~~~~~~~~~~rl~~l~~a~~~G--i~~~~g~i~G~g 219 (369)
T 1r30_A 146 MGLEACMTLGTL----SESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAG--IKVCSGGIVGLG 219 (369)
T ss_dssp TTSEEEEECSSC----CHHHHHHHHHHCCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHH--CEEECCEEECSS
T ss_pred CCCEEEEECCCC----CHHHHHHHHHHCCCEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC--CCCEEEEEECCC
T ss_conf 475476512679----89999999851878883434245554213434587999999999999828--973588897889
Q ss_pred ECHHHHHHHHHHHHHCCCCEEECCHH-CCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 20688999999999669939975022-2786100780002384699999999997
Q gi|254780676|r 241 ETRNEILQLMDDLRTADVDFLTMGQY-LQPTRKHHKVESFVTPQDFKSYETIAYS 294 (329)
Q Consensus 241 Et~eEi~e~l~DLr~~gvdilTiGQY-L~Ps~~h~pV~ryv~P~eF~~~~~~a~~ 294 (329)
||++|+++.+..|++.+++.-+++-+ +.|-+ .-|......|..++.++-+|..
T Consensus 220 Et~ed~i~~l~~Lr~L~~~~~~v~~~~f~P~~-gT~l~~~~~~~~~e~lr~iAi~ 273 (369)
T 1r30_A 220 ETVKDRAGLLLQLANLPTPPESVPINMLVKVK-GTPLADNDDVDAFDFIRTIAVA 273 (369)
T ss_dssp CCHHHHHHHHHHHHSSSSCCSEEEEEECCCCT-TSTTSSCCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCC-CCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999998668998665550046689-9976667899999999999999
No 2
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=99.79 E-value=8.1e-18 Score=145.86 Aligned_cols=193 Identities=18% Similarity=0.277 Sum_probs=152.4
Q ss_pred EEECCCCCCCCCCCCCCCCC--C--CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 98665223535223446789--9--8888235799999999707751898505445345325899999999998533586
Q gi|254780676|r 90 MILGAICTRACTFCNVATGK--P--QPLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPST 165 (329)
Q Consensus 90 MilG~~CTR~C~FC~V~~G~--P--~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~ 165 (329)
+=.-+.|..+|.||+..... + ..++++|-...++....+|.+.+++++ ++.++.....+...++.|++..+.+
T Consensus 57 I~~Sn~C~~~C~fC~~~~~~~~~~~~~ls~eeI~~~~~~~~~~G~~~i~l~~---g~~~~~~~~~~~~~i~~i~~~~~~i 133 (348)
T 3iix_A 57 IEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQS---GEDPYXMPDVISDIVKEIKKMGVAV 133 (348)
T ss_dssp EEEECCCSCCCTTCTTCTTCCSSCCCBCCHHHHHHHHHHHHHTTCSEEEEEE---SCCGGGTTHHHHHHHHHHHTTSCEE
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC---CCCCCCCHHHHHHHHHHCCCCCEEE
T ss_conf 8865888998914998836999766158999999999999981992899825---8887664899999987403332123
Q ss_pred EEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEE-EECH
Q ss_conf 8998154623446899987410702332013830-0027563897035899999999997089167014048876-4206
Q gi|254780676|r 166 TIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGL-GETR 243 (329)
Q Consensus 166 ~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGL-GEt~ 243 (329)
.+.+- .-..+.++.+.+||.+.+++|+||. +++|+.+++..+|++.+++++.++++| +.+.+|+|+|| |||.
T Consensus 134 ~~~~g----~~~~e~l~~L~~aG~~~~~~~~et~~~~~~~~i~~~~~~~~~~~~i~~~~~~G--i~v~~~~i~GlpgEt~ 207 (348)
T 3iix_A 134 TLSLG----EWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELG--YETGAGSMVGLPGQTI 207 (348)
T ss_dssp EEECC----CCCHHHHHHHHHHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTT--CEEEECBEESCTTCCH
T ss_pred EECCC----CCHHHHHHHHHHHCCCEEEECHHHCCHHHEEECCCCCCCCHHHHHHHHHHHCC--CEEEEEEEEECCCCCH
T ss_conf 20245----43089999999828967985634434021220114777312467766776249--7278889994599999
Q ss_pred HHHHHHHHHHHHCCCCEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 88999999999669939975022278610078000238469999999999
Q gi|254780676|r 244 NEILQLMDDLRTADVDFLTMGQYLQPTRKHHKVESFVTPQDFKSYETIAY 293 (329)
Q Consensus 244 eEi~e~l~DLr~~gvdilTiGQYL~Ps~~h~pV~ryv~P~eF~~~~~~a~ 293 (329)
|++++++..|++++.|.+.++.+ .|-+. -|......+...+.++-+|.
T Consensus 208 ed~~~~l~~lr~l~~~~~~~~~f-~P~pg-Tpl~~~~~~~~~~~l~~ia~ 255 (348)
T 3iix_A 208 DDLVDDLLFLKEHDFDMVGIGPF-IPHPD-TPLANEKKGDFTLTLKMVAL 255 (348)
T ss_dssp HHHHHHHHHHHHHTCSEECCEEC-CCCTT-STTTTSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEEEEEEE-EECCC-CCCCCCCCCCHHHHHHHHHH
T ss_conf 99999999997279988989866-75199-97656899599999999999
No 3
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.01 E-value=8.1e-08 Score=75.28 Aligned_cols=198 Identities=14% Similarity=0.184 Sum_probs=131.6
Q ss_pred CCEEEEEECCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHH-----HHHHHHHHH
Q ss_conf 72699986652235352234467--89988882357999999997077518985054453453258-----999999999
Q gi|254780676|r 85 NHATFMILGAICTRACTFCNVAT--GKPQPLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGA-----QHFAEVISA 157 (329)
Q Consensus 85 gtATFMilG~~CTR~C~FC~V~~--G~P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA-----~hfa~~I~~ 157 (329)
++-.|+--..-|..+|.||++.. |+...-++++-.+=++...+-|-+.+++++.| +-+.|. ..+..-+.+
T Consensus 3 ~~~A~i~isrGC~~~CsFC~ip~~rG~~rsr~~e~Ii~Ei~~l~~~G~kei~l~~~d---~~~~~~~~~~~~~~~~L~~~ 79 (304)
T 2qgq_A 3 RPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQD---TTSYGIDLYRKQALPDLLRR 79 (304)
T ss_dssp CSEEEEESBCCC-------------CCCCBCCHHHHHHHHHHHHHTTCCEEEEECTT---GGGTTHHHHSSCCHHHHHHH
T ss_pred CCEEEEEECCCCCCCCEECEEEEEECCEEEECHHHHHHHHHHHHHCCCEEEEEEEEC---CCCCCCCCCCCHHHHHHHHH
T ss_conf 861998977698998775556201498377199999999999998699099998564---66555424451148999998
Q ss_pred HHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHH---CCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 9853358689981546234468999874107023320---13830-0027563897035899999999997089167014
Q gi|254780676|r 158 IRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNH---NLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKS 233 (329)
Q Consensus 158 Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nH---NiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKS 233 (329)
+........+....++-....+.+..++...+.++.| -+|+. ++.-+.++.+.+.+.-++.++.+++.+|++...+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~igieSgs~~vLk~m~r~~t~e~~~~~v~~ir~~~p~~~i~t 159 (304)
T 2qgq_A 80 LNSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRT 159 (304)
T ss_dssp HHTSSSSCEEEECCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 72368835899403584367788777676448464677406432787999875047645554458876766489955763
Q ss_pred CEEEEE-EECHHHHHHHHHHHHHCCCCEEECCHHCC-CCCCCCCCCCCCCHHHH
Q ss_conf 048876-42068899999999966993997502227-86100780002384699
Q gi|254780676|r 234 GIMLGL-GETRNEILQLMDDLRTADVDFLTMGQYLQ-PTRKHHKVESFVTPQDF 285 (329)
Q Consensus 234 GlMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL~-Ps~~h~pV~ryv~P~eF 285 (329)
.+|+|+ |||+++..++++-+++++.|.+.+..|-. |.-.-.....-++|+.-
T Consensus 160 ~fIvGfPgET~edf~~T~~fl~~~~~d~~~i~~~sp~pGT~a~~~~~~v~~~~k 213 (304)
T 2qgq_A 160 SIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMA 213 (304)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECCC-----------CCCHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCCHHHH
T ss_conf 575678987689999999999856978330024256699766663678997999
No 4
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4S cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=98.50 E-value=7e-06 Score=61.58 Aligned_cols=219 Identities=14% Similarity=0.178 Sum_probs=139.9
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCHH---------HHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf 2699986652235352234467899888823---------5799999999707751898505445345325899999999
Q gi|254780676|r 86 HATFMILGAICTRACTFCNVATGKPQPLDPQ---------EPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVIS 156 (329)
Q Consensus 86 tATFMilG~~CTR~C~FC~V~~G~P~~~D~~---------EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~ 156 (329)
....-|-=.-|.+.|.||+..+......+.. |-..+|.......+..+.+-.-+---| ....+++.+.
T Consensus 52 plsLYiHIPFC~~~C~yC~~~~~~~~~~~~~~~Yl~~L~~Ei~~~a~~~~~~~v~~i~~GGGTpt~L---~~~~l~~l~~ 128 (457)
T 1olt_A 52 PLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYL---NKAQISRLMK 128 (457)
T ss_dssp CEEEEEEECEESSCCTTCCSSCEECSCTHHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEESCGGGS---CHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC---CHHHHHHHHH
T ss_conf 6499997089898899999824558886619999999999999965563899745999828750448---9999999999
Q ss_pred HHHHHCC-----CCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf 9985335-----868998154623446899987410702332013830-0027563897035899999999997089167
Q gi|254780676|r 157 AIRESAP-----STTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPLIF 230 (329)
Q Consensus 157 ~Ir~~~P-----~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~ 230 (329)
.|++..+ +.+||+-.-++ ..+.|+.+.++|...++=.+++. +...+.+...++.++.++++..++++|.. .
T Consensus 129 ~l~~~f~~~~~~e~tiE~~P~~~--~~~~l~~l~~~G~nRiSlGvQsfd~~vlk~i~R~~~~e~~~~~i~~~r~~g~~-~ 205 (457)
T 1olt_A 129 LLRENFQFNADAEISIEVDPREI--ELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFT-S 205 (457)
T ss_dssp HHHHHSCEEEEEEEEEEECSSSC--CTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCC-S
T ss_pred HHHHHCCCCCCEEEEEEECCCCC--CHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC-E
T ss_conf 99986477877079998259987--17679999737998799607869779885621467388899999999984054-3
Q ss_pred ECCCEEEEE-EECHHHHHHHHHHHHHCCCCEEECCHHCC-CCCC----CCCCCCCCCHHHHHHHHHH----HHHCCCCEE
Q ss_conf 014048876-42068899999999966993997502227-8610----0780002384699999999----997496243
Q gi|254780676|r 231 TKSGIMLGL-GETRNEILQLMDDLRTADVDFLTMGQYLQ-PTRK----HHKVESFVTPQDFKSYETI----AYSKGFLMV 300 (329)
Q Consensus 231 TKSGlMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL~-Ps~~----h~pV~ryv~P~eF~~~~~~----a~~~Gf~~V 300 (329)
.-.-||.|| |||.+++.++++.+.+.+.|-|++-.|-. |+.. ..+......+++-.++-+. -.+.||.+.
T Consensus 206 i~~DLI~GlPgqt~e~~~~tl~~~~~l~pd~i~~y~~~~~p~~~~~q~~~~~~~lp~~~~~~~~~~~a~~~L~~~GY~~~ 285 (457)
T 1olt_A 206 TNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFI 285 (457)
T ss_dssp CEEEEEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 72331577998337788889988884089811343110078427766322223542027999999999999997783542
Q ss_pred ECCCCCCCCH
Q ss_conf 4048300103
Q gi|254780676|r 301 SASPLTRSSY 310 (329)
Q Consensus 301 ~SgPlVRSSY 310 (329)
.-.-++|...
T Consensus 286 ~~~~fak~~d 295 (457)
T 1olt_A 286 GMDHFARPDD 295 (457)
T ss_dssp ETTEEECTTS
T ss_pred HHHHHCCCCH
T ss_conf 1233127872
No 5
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=98.11 E-value=2.9e-05 Score=57.21 Aligned_cols=205 Identities=13% Similarity=0.187 Sum_probs=121.3
Q ss_pred CEEEEEECCCCCCCCCCCCCC----CCCCCCCCHHHH-HHHHHHHHHH--CCCEEEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 269998665223535223446----789988882357-9999999970--775189850544534532589999999999
Q gi|254780676|r 86 HATFMILGAICTRACTFCNVA----TGKPQPLDPQEP-ENISWAVRSM--KLSHVVITSVDRDDLDDGGAQHFAEVISAI 158 (329)
Q Consensus 86 tATFMilG~~CTR~C~FC~V~----~G~P~~~D~~EP-~rvA~av~~l--~Lk~vViTSV~RDDL~DgGA~hfa~~I~~I 158 (329)
.+.|+- -|--+|.||... .....+++.+|- ..+.+..+.+ +...|.+|. =+-+. -.....+.++.+
T Consensus 22 ~~vf~~---GCN~~C~~C~n~~~~~~~~~~~~~~~e~~~ei~~~~~~~~~~~~~v~~sG--GEP~l--~~~~l~~l~~~~ 94 (245)
T 3c8f_A 22 FITFFQ---GCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASG--GEAIL--QAEFVRDWFRAC 94 (245)
T ss_dssp EEEEES---CCSCCCTTCSCGGGCCTTCSEEECHHHHHHHHGGGHHHHTSTTCEEEEEE--SCGGG--GHHHHHHHHHHH
T ss_pred EEEECC---CCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCC--CCCCC--CHHHHHHHHHHH
T ss_conf 999878---74788989997134186799188999999999999997525787585355--56534--699999999988
Q ss_pred HHHCCCCEEEEECCCCC-CCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEE
Q ss_conf 85335868998154623-446899987410702332013830-0027563897035899999999997089167014048
Q gi|254780676|r 159 RESAPSTTIEVLTPDFL-RKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIM 236 (329)
Q Consensus 159 r~~~P~~~IEvLiPDf~-G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlM 236 (329)
|+....+.++ +-.+. ...+.++.+.. ..|.++-.+... +..|..++ +.++++-|+.|+.+++.+..+...+=+|
T Consensus 95 k~~g~~~~l~--TnG~~~~~~~~~~~l~~-~~d~v~id~~~~~~~~~~~~~-g~~~~~vl~~l~~l~~~g~~v~i~~~~i 170 (245)
T 3c8f_A 95 KKEGIHTCLD--TNGFVRRYDPVIDELLE-VTDLVMLDLKQMNDEIHQNLV-GVSNHRTLEFAKYLANKNVKVWIRYVVV 170 (245)
T ss_dssp HTTTCCEEEE--ECCCCCCCCHHHHHHHH-TCSEEEEECCCSSHHHHHHHH-SSCSHHHHHHHHHHHHHTCCEEEEEEEC
T ss_pred HHHCCCEEEE--CCCCCCCCHHHHHHHHC-CCCEEEEECCCCCHHHHHHHH-CCCCHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 8643847997--78865553456666523-575799843546788999873-8650899999999997899899999998
Q ss_pred EEEEECHHHHHHHHHHHHHCC-CCEEECCHHCCCCCCC-------CCC--CCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 876420688999999999669-9399750222786100-------780--0023846999999999974962434
Q gi|254780676|r 237 LGLGETRNEILQLMDDLRTAD-VDFLTMGQYLQPTRKH-------HKV--ESFVTPQDFKSYETIAYSKGFLMVS 301 (329)
Q Consensus 237 vGLGEt~eEi~e~l~DLr~~g-vdilTiGQYL~Ps~~h-------~pV--~ryv~P~eF~~~~~~a~~~Gf~~V~ 301 (329)
-|+-.++|++.++.+-+++.+ ++.+.|-+|-+-...+ ++. .+-.++++.+++++++.+.|++.|.
T Consensus 171 ~g~~d~~e~i~~i~~~i~~l~~~~~v~l~py~~~g~~k~~~~~~~y~~~~~~~p~~e~l~~~~~~~~~~G~~V~~ 245 (245)
T 3c8f_A 171 PGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKVMF 245 (245)
T ss_dssp TTTTCCHHHHHHHHHHHHHHCCEEEEEEEECCCCSHHHHHHTTCCCTTTTCCCCCHHHHHHHHHHHHTTTCCBCC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEC
T ss_conf 994899999999999998579975588844761664116651854544578999999999999999985990679
No 6
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=98.00 E-value=0.00017 Score=51.85 Aligned_cols=198 Identities=18% Similarity=0.253 Sum_probs=118.1
Q ss_pred CCCCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHH-----------------------HHCCCEEEEECCCCCCCCCC
Q ss_conf 52235352234467----8998888235799999999-----------------------70775189850544534532
Q gi|254780676|r 94 AICTRACTFCNVAT----GKPQPLDPQEPENISWAVR-----------------------SMKLSHVVITSVDRDDLDDG 146 (329)
Q Consensus 94 ~~CTR~C~FC~V~~----G~P~~~D~~EP~rvA~av~-----------------------~l~Lk~vViTSV~RDDL~Dg 146 (329)
..|.-+|.||--.. +...+...++|+.+.+-+- .|+.+|++++..--==|-
T Consensus 79 ~~CNlrCvfC~r~~~~~~~~~~~~~~d~pe~Ivee~i~~~~~~i~~~~g~~~~~~e~~~Ea~~~~hvais~~GEPll~-- 156 (342)
T 2yx0_A 79 AWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISLSGEPMLY-- 156 (342)
T ss_dssp SCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECSSSCGGGS--
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCC--
T ss_conf 520258988899877777766544447989999999999999887642676302566665248767999578775345--
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH--HHHHCCCHHHHHCCCCC-CCCCCCC---CCCCHHHHHHHHHH
Q ss_conf 589999999999853358689981546234468999--87410702332013830-0027563---89703589999999
Q gi|254780676|r 147 GAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALE--KVVSAKPDVFNHNLETV-ASNYLMV---RPGARYFHSLRLLQ 220 (329)
Q Consensus 147 GA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~--~v~~A~pdV~nHNiETV-~rLy~~V---Rp~a~Y~rSL~vL~ 220 (329)
.+|.+.|+.+++. +..+-+.+-... .+.+. ....++++.++=-|... +..|..+ |-...|++-|+.|+
T Consensus 157 --p~l~eli~~~~~~--gi~~~l~TNGtl--~~~~~~l~~~~~~~~~l~vSLDa~~~e~~~ki~r~~~~~~~ervl~~L~ 230 (342)
T 2yx0_A 157 --PYMGDLVEEFHKR--GFTTFIVTNGTI--PERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLE 230 (342)
T ss_dssp --TTHHHHHHHHHHT--TCEEEEEECSCC--HHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHC--CCEEEEECCCCC--HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf --5599999999863--964999658866--1179999987478867998357899899998737667677999999999
Q ss_pred HHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCC--CCCCCCCCCCCCCHHHHHHHHH-HHHHC-C
Q ss_conf 999708916701404887642068899999999966993997502227--8610078000238469999999-99974-9
Q gi|254780676|r 221 RVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQ--PTRKHHKVESFVTPQDFKSYET-IAYSK-G 296 (329)
Q Consensus 221 ~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~--Ps~~h~pV~ryv~P~eF~~~~~-~a~~~-G 296 (329)
..++.+..+. --+.|--|-.++|+.+..+-+...++|++-+-.|.- .|..-|...--...+|..+|.+ ++..+ |
T Consensus 231 ~L~~~g~~~v--ir~tlv~g~N~~ei~~~a~li~~~~pdfie~k~y~~~G~s~~~L~~~~mP~~eEv~~fa~~l~~~l~g 308 (342)
T 2yx0_A 231 LMRDLPTRTV--VRLTLVKGENMHSPEKYAKLILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKHLPG 308 (342)
T ss_dssp HHTTCSSEEE--EEEEECTTTTCCCHHHHHHHHHHHCCSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHTTCTT
T ss_pred HHHHCCCCEE--EEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 9996699889--99999689876669999999986599989996038705786546401399889999999999986359
Q ss_pred CCEEE
Q ss_conf 62434
Q gi|254780676|r 297 FLMVS 301 (329)
Q Consensus 297 f~~V~ 301 (329)
|....
T Consensus 309 y~i~~ 313 (342)
T 2yx0_A 309 YHIED 313 (342)
T ss_dssp EEEEE
T ss_pred CEEEC
T ss_conf 77640
No 7
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=97.88 E-value=0.00063 Score=47.78 Aligned_cols=190 Identities=13% Similarity=0.161 Sum_probs=132.9
Q ss_pred ECCCCCCCCCCCCCCCCC---------CCCCCHHHHHHHHHHHHHHCCCEEEEEC---CCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 665223535223446789---------9888823579999999970775189850---5445345325899999999998
Q gi|254780676|r 92 LGAICTRACTFCNVATGK---------PQPLDPQEPENISWAVRSMKLSHVVITS---VDRDDLDDGGAQHFAEVISAIR 159 (329)
Q Consensus 92 lG~~CTR~C~FC~V~~G~---------P~~~D~~EP~rvA~av~~l~Lk~vViTS---V~RDDL~DgGA~hfa~~I~~Ir 159 (329)
+-+.|-=+|.||....+. ...+..+|-.++.+..+++|...+.+|. --|.| |.+.|+.++
T Consensus 20 IT~rCNL~C~~C~~~~~~~~~~~~~~~~~~Ls~eei~~ii~~~~~~gv~~i~ltGGEPllr~d--------~~~~i~~~~ 91 (340)
T 1tv8_A 20 VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRD--------LDVLIAKLN 91 (340)
T ss_dssp CCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHHHHHHHTTCCEEEEESSCGGGSTT--------HHHHHHHHT
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHCCHH--------HHHHHHHHH
T ss_conf 155217889688964006777776761034899999999999987698099963886200700--------699998752
Q ss_pred HHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCC-CCHHHHHHHHHHHHHHCCCEEEECCCEEE
Q ss_conf 5335868998154623446899987410702332013830-002756389-70358999999999970891670140488
Q gi|254780676|r 160 ESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRP-GARYFHSLRLLQRVKELDPLIFTKSGIML 237 (329)
Q Consensus 160 ~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp-~a~Y~rSL~vL~~aK~~~~~i~TKSGlMv 237 (329)
+... ..+-+++-.-.-..+.++.+.+++.+.++=-|... +..+..+|. ...|++-+..++.+++.|..+ |-..-+
T Consensus 92 ~~~~-~~~~~~Tng~ll~~~~~~~L~~~gl~~v~ISld~~~~e~~~~i~g~~g~~~~~~~~i~~~~~~g~~v--~in~vv 168 (340)
T 1tv8_A 92 QIDG-IEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNV--KVNVVI 168 (340)
T ss_dssp TCTT-CCEEEEEECSTTHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEE--EEEEEE
T ss_pred HCCC-CCEEECCCCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCE--EEEEEE
T ss_conf 1022-1024210786534213899998499888504677658888776510565000037999999879987--999897
Q ss_pred EEEECHHHHHHHHHHHHHCCCCEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 7642068899999999966993997502227861007800023846999999999
Q gi|254780676|r 238 GLGETRNEILQLMDDLRTADVDFLTMGQYLQPTRKHHKVESFVTPQDFKSYETIA 292 (329)
Q Consensus 238 GLGEt~eEi~e~l~DLr~~gvdilTiGQYL~Ps~~h~pV~ryv~P~eF~~~~~~a 292 (329)
--|...+|+.+.++-.++.++++--+-....+......-..++++++...+.+..
T Consensus 169 ~~~~N~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 223 (340)
T 1tv8_A 169 QKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQH 223 (340)
T ss_dssp CTTTTGGGHHHHHHHHHHTTCCEEEEECCCBCSSSSBCCSSCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 4886256689999999847981999999843676663312568899999999984
No 8
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=97.23 E-value=0.0036 Score=42.46 Aligned_cols=198 Identities=17% Similarity=0.282 Sum_probs=112.1
Q ss_pred CCCCCCCCCCCCCCCCCC--------CCCCHHHHHHHHHHHH------------------------HHCCCEEEEECCCC
Q ss_conf 652235352234467899--------8888235799999999------------------------70775189850544
Q gi|254780676|r 93 GAICTRACTFCNVATGKP--------QPLDPQEPENISWAVR------------------------SMKLSHVVITSVDR 140 (329)
Q Consensus 93 G~~CTR~C~FC~V~~G~P--------~~~D~~EP~rvA~av~------------------------~l~Lk~vViTSV~R 140 (329)
++.|--+|.||--....| .....++|+.+.+.+. .++.+|+.|+..--
T Consensus 59 ~~~CN~rC~fC~r~~~~~~~~~~~~~~~~~~d~pe~Ive~~i~~~~kli~~~~g~~~~v~~e~~~ea~~~~~iais~~GE 138 (311)
T 2z2u_A 59 VIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHVAISLSGE 138 (311)
T ss_dssp SSCCSCC----------------CCSCCCCCCCHHHHHHHHHHHHHHHHHGGGGGHHHHCHHHHHHHTSCCEEEECSSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCC
T ss_conf 30020879477698878777773101344548999999999999999976532677540156666523763798626887
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCC-CC-CCHHHHHHH
Q ss_conf 53453258999999999985335868998154623446899987410702332013830-0027563-89-703589999
Q gi|254780676|r 141 DDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMV-RP-GARYFHSLR 217 (329)
Q Consensus 141 DDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~V-Rp-~a~Y~rSL~ 217 (329)
==|- .+|.+.|+.+++. +.++-+.+- |. .++.+.+++++.++=.|... +..|..+ |+ ...|++-++
T Consensus 139 P~l~----p~l~eli~~~~~~--gi~~~l~TN---G~--~~d~l~~l~~~~l~vSlDa~~~e~~~~i~r~~~~~~e~vl~ 207 (311)
T 2z2u_A 139 PTLY----PYLDELIKIFHKN--GFTTFVVSN---GI--LTDVIEKIEPTQLYISLDAYDLDSYRRICGGKKEYWESILN 207 (311)
T ss_dssp GGGS----TTHHHHHHHHHHT--TCEEEEEEC---SC--CHHHHHHCCCSEEEEECCCSSTTTC----CCCHHHHHHHHH
T ss_pred CCHH----HHHHHHHHHHHHC--CCEEEEEEC---CC--CHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHH
T ss_conf 3047----8999999999875--972775415---43--44789870551588630479999999986756237999999
Q ss_pred HHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCC--CCCCCCCCCCCCCHHHHHHHH-HHHHH
Q ss_conf 999999708916701404887642068899999999966993997502227--861007800023846999999-99997
Q gi|254780676|r 218 LLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQ--PTRKHHKVESFVTPQDFKSYE-TIAYS 294 (329)
Q Consensus 218 vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~--Ps~~h~pV~ryv~P~eF~~~~-~~a~~ 294 (329)
.|+..++.+... .-.-+|-|.- +|+.+..+-....++|++-+--|.. -+...+....-..-+|..++. .++..
T Consensus 208 ~l~~l~~~~~~v-ir~tlv~g~N---ddi~~~a~l~~~~~~~fIEvk~~~~~G~s~~~l~~~~~p~~eEv~e~~~~l~~~ 283 (311)
T 2z2u_A 208 TLDILKEKKRTC-IRTTLIRGYN---DDILKFVELYERADVHFIELKSYMHVGYSQKRLKKEDMLQHDEILKLAKMLDEN 283 (311)
T ss_dssp HHHHHTTSSSEE-EEEEECTTTT---CCGGGTHHHHHHHTCSEEEEEECC------------CCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHCCCEE-EEEEEECCCC---CCHHHHHHHHHHCCCCEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 999998669879-9998436776---489999999975399889996408514664525402599999999999998652
Q ss_pred CCCCEEECCCC
Q ss_conf 49624340483
Q gi|254780676|r 295 KGFLMVSASPL 305 (329)
Q Consensus 295 ~Gf~~V~SgPl 305 (329)
.||..+.-.+-
T Consensus 284 ~~y~i~~e~~~ 294 (311)
T 2z2u_A 284 SSYKLIDDSED 294 (311)
T ss_dssp SSEEEEEEEGG
T ss_pred CCCEEECCCCC
T ss_conf 49646337687
No 9
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, S-adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=96.62 E-value=0.027 Score=36.28 Aligned_cols=201 Identities=14% Similarity=0.187 Sum_probs=117.9
Q ss_pred CCEEECCCCCCCHH--HHHCCCCEEEEEECCCCCCCCCCCCCCCC--C-CCCCCHHHHHHHHHHHHH-HCCCEEEEECCC
Q ss_conf 82365257887876--75089726999866522353522344678--9-988882357999999997-077518985054
Q gi|254780676|r 66 LTTVCEEAGCPNIG--ECWNKNHATFMILGAICTRACTFCNVATG--K-PQPLDPQEPENISWAVRS-MKLSHVVITSVD 139 (329)
Q Consensus 66 L~TVCeeA~CPNi~--ECw~~gtATFMilG~~CTR~C~FC~V~~G--~-P~~~D~~EP~rvA~av~~-l~Lk~vViTSV~ 139 (329)
..-+.|+...|--| .=|. +++.|++ -+.|--.|+||-=... . -..+..+|-+++.+.++. ++++-|.||.=+
T Consensus 95 ~Dp~~e~~~~~~~gl~hkY~-~rvll~v-T~~Cn~~CrYC~R~~~~~~~~~~l~~~ei~~~i~yi~~~~~I~~V~lTGGe 172 (416)
T 2a5h_A 95 EDPLHEDTDSPVPGLTHRYP-DRVLLLI-TDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGD 172 (416)
T ss_dssp SSTTCTTTSCSBTTEECCSS-SEEEEEE-ESCCSSCCTTCTTTTTTTSSSSBCCHHHHHHHHHHHHTCTTCCEEEEEESC
T ss_pred CCCCCCCCCCCCCCCEECCC-CEEEEEE-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_conf 58732122488888400158-7589984-575477287989877568643434689999999999848982699997897
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC--CCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 4534532589999999999853358689981546--23446899987410702332013830002756389703589999
Q gi|254780676|r 140 RDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPD--FLRKPHALEKVVSAKPDVFNHNLETVASNYLMVRPGARYFHSLR 217 (329)
Q Consensus 140 RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPD--f~G~~~al~~v~~A~pdV~nHNiETV~rLy~~VRp~a~Y~rSL~ 217 (329)
===++|.+ +...|+.+++...--.|-+-+-. +.-. .-.+.+++++.+..|=-|.| +.. .+.--....++
T Consensus 173 PL~r~d~~---L~~li~~l~~i~~i~~iri~T~~~~~~p~-r~~~~L~~~g~~~~nisldt---h~~--h~~el~~~v~~ 243 (416)
T 2a5h_A 173 ALLVSDET---LEYIIAKLREIPHVEIVRIGSRTPVVLPQ-RITPELVNMLKKYHPVWLNT---HFN--HPNEITEESTR 243 (416)
T ss_dssp TTSSCHHH---HHHHHHHHHTSTTCCEEEEECSHHHHCGG-GCCHHHHHHHGGGCSEEEEE---CCC--SGGGCCHHHHH
T ss_pred CCCCCHHH---HHHHHHHHHHCCCCCEEEEECCCCCCCCH-HHHHHHHHHHHCCCEEEEEE---ECC--CCCCCCHHHHH
T ss_conf 34378899---99999999847998647888067544727-77999998774276389997---427--71005599999
Q ss_pred HHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCC-CCCCCCCCC
Q ss_conf 999999708916701404887642068899999999966993997502227-861007800
Q gi|254780676|r 218 LLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQ-PTRKHHKVE 277 (329)
Q Consensus 218 vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~-Ps~~h~pV~ 277 (329)
.++.+++.|..+..-+=+|=|.-++.+++.+++..|.+.|+...-|=|.-. ....|+.|.
T Consensus 244 ~i~~l~~~Gi~vk~n~VllkGvNDd~~~l~~L~~~l~~~gv~pyyi~~~d~~~g~~~f~v~ 304 (416)
T 2a5h_A 244 ACQLLADAGVPLGNQSVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTP 304 (416)
T ss_dssp HHHHHHHTTCCEEEEEECCTTTTCSHHHHHHHHHHHHHTTEEEEEEECCCCBTTCGGGCCC
T ss_pred HHHHHHHCCCEEEEECEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCCCC
T ss_conf 9999997699487304056774388899999999998679769999834788743215677
No 10
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling, bifunctional enzyme; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=94.68 E-value=0.31 Score=28.78 Aligned_cols=125 Identities=13% Similarity=0.127 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHHHHCCCEEEE-ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC--HHHHHHHHH----
Q ss_conf 8235799999999707751898-505445345325899999999998533586899815462344--689998741----
Q gi|254780676|r 114 DPQEPENISWAVRSMKLSHVVI-TSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRK--PHALEKVVS---- 186 (329)
Q Consensus 114 D~~EP~rvA~av~~l~Lk~vVi-TSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~--~~al~~v~~---- 186 (329)
|........+.++.+|++-++- ....+-| ...+.+.++.+.+..++. +-++|--|. .+.+..++.
T Consensus 118 ~~~~~~~~~~~a~~~g~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~---i~l~DT~G~~~P~~v~~~v~~l~~ 189 (345)
T 1nvm_A 118 EADVSKQHIEYARNLGMDTVGFLMMSHMIP-----AEKLAEQGKLMESYGATC---IYMADSGGAMSMNDIRDRMRAFKA 189 (345)
T ss_dssp CGGGGHHHHHHHHHHTCEEEEEEESTTSSC-----HHHHHHHHHHHHHHTCSE---EEEECTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCC-----HHHHHHHHHHHHHCCCCE---EEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 777688999999982663000220255676-----356778999998439704---662353346687999999999998
Q ss_pred C-CCHH----HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEC-----HHHHHHHHHHH-HH
Q ss_conf 0-7023----320138300027563897035899999999997089167014048876420-----68899999999-96
Q gi|254780676|r 187 A-KPDV----FNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGET-----RNEILQLMDDL-RT 255 (329)
Q Consensus 187 A-~pdV----~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt-----~eEi~e~l~DL-r~ 255 (329)
. +|++ =.|| -.+-....+|. +-++|.+.. .+=+.||||- -|+++..+..+ .+
T Consensus 190 ~~~~~i~ig~H~Hn-----------d~GlA~AN~la----A~~aGa~~i--d~ti~G~G~~~GN~~tE~lv~~l~~~g~~ 252 (345)
T 1nvm_A 190 VLKPETQVGMHAHH-----------NLSLGVANSIV----AVEEGCDRV--DASLAGMGAGAGNAPLEVFIAVAERLGWN 252 (345)
T ss_dssp HSCTTSEEEEECBC-----------TTSCHHHHHHH----HHHTTCCEE--EEBGGGCSSTTCBCBHHHHHHHHHHHTCB
T ss_pred HCCCCCCCEEEECC-----------CCCCHHHHHHH----HHHHCCCEE--EEECCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 62775442157458-----------86829999999----999298889--86335589978862099999999955997
Q ss_pred CCCCEEEC
Q ss_conf 69939975
Q gi|254780676|r 256 ADVDFLTM 263 (329)
Q Consensus 256 ~gvdilTi 263 (329)
.|.|+-.|
T Consensus 253 ~~~d~~~l 260 (345)
T 1nvm_A 253 HGTDLYTL 260 (345)
T ss_dssp CCSCHHHH
T ss_pred CCCCHHHH
T ss_conf 89898999
No 11
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate esterase; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=93.94 E-value=0.44 Score=27.72 Aligned_cols=180 Identities=18% Similarity=0.189 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 66899999999749823652578878767508972699986652235352234467899888823579999999970775
Q gi|254780676|r 52 SGYKETYNILRSRNLTTVCEEAGCPNIGECWNKNHATFMILGAICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKLS 131 (329)
Q Consensus 52 ~~~~~~~~~l~~~~L~TVCeeA~CPNi~ECw~~gtATFMilG~~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~Lk 131 (329)
+.+..+-.+|+++++ .|||.+-|..= . .......|.-+.+.++. |-
T Consensus 54 ~~t~~il~~L~~~~i-------------------kATFFv~G~~~---------~----~~~~~~~p~~~k~~~~~-Gh- 99 (254)
T 2iw0_A 54 TFTPQLLDILKQNDV-------------------RATFFVNGNNW---------A----NIEAGSNPDTIRRMRAD-GH- 99 (254)
T ss_dssp TTHHHHHHHHHHHTC-------------------CCEEEECSBSS---------S----BTTSTTHHHHHHHHHHT-TC-
T ss_pred HHHHHHHHHHHHCCC-------------------CEEEEEECCCC---------C----CCHHHHCHHHHHHHHHC-CC-
T ss_conf 719999999997799-------------------38999968765---------6----43355699999999977-98-
Q ss_pred EEEEECCCCCCCCCC----HHHHHHHHHHHHHHHCCCCEEEEE-CCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCC
Q ss_conf 189850544534532----589999999999853358689981-546234468999874107023320138300027563
Q gi|254780676|r 132 HVVITSVDRDDLDDG----GAQHFAEVISAIRESAPSTTIEVL-TPDFLRKPHALEKVVSAKPDVFNHNLETVASNYLMV 206 (329)
Q Consensus 132 ~vViTSV~RDDL~Dg----GA~hfa~~I~~Ir~~~P~~~IEvL-iPDf~G~~~al~~v~~A~pdV~nHNiETV~rLy~~V 206 (329)
-+-.-|.+..++..- -...+.++.+.|++.. +...-.. -|-..-+.+.++.+.+.|-.++.-|+.|-.-...
T Consensus 100 eIgnHt~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~p~~fR~PyG~~~~~~~~~l~~~G~~~v~w~~dt~Dw~~~-- 176 (254)
T 2iw0_A 100 LVGSHTYAHPDLNTLSSADRISQMRQLEEATRRID-GFAPKYMRAPYLSCDAGCQGDLGGLGYHIIDTNLDTKDYENN-- 176 (254)
T ss_dssp EEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHH-SCEESEECCGGGCCCHHHHHHHHHTTCEEECCSEECCTTTSC--
T ss_pred EEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH-CCCCCEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCC--
T ss_conf 88850677887433065888899999999988861-977511318978769899999998699899555144212578--
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEE----ECHHHHH-HHHHHHHHCCCCEEECCHHCCCCCC
Q ss_conf 8970358999999999970891670140488764----2068899-9999999669939975022278610
Q gi|254780676|r 207 RPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLG----ETRNEIL-QLMDDLRTADVDFLTMGQYLQPTRK 272 (329)
Q Consensus 207 Rp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLG----Et~eEi~-e~l~DLr~~gvdilTiGQYL~Ps~~ 272 (329)
.+... ..|.+-+.. .........+.|+| |= .|-.+++ ..+.-|++-|..++|+.|+|...+.
T Consensus 177 ~~~~~-~~~~~~i~~--~~~~~~~~~g~IvL-~Hd~~~~t~~~~l~~iI~~lk~~Gy~fvtl~ell~~~~~ 243 (254)
T 2iw0_A 177 KPETT-HLSAEKFNN--ELSADVGANSYIVL-SHDVHEQTVVSLTQKLIDTLKSKGYRAVTVGECLGDAPE 243 (254)
T ss_dssp STTTH-HHHHHHHHH--HSCSCGGGCCEEEE-ECTTSHHHHHTHHHHHHHHHHHTTCEECCHHHHTTCCGG
T ss_pred CCCHH-HHHHHHHHH--HHHHCCCCCCEEEE-ECCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCHH
T ss_conf 98605-899999999--98613489997999-359985589999999999999879999788995173664
No 12
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensation, amino-acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=92.90 E-value=0.64 Score=26.59 Aligned_cols=144 Identities=11% Similarity=-0.005 Sum_probs=94.6
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCC
Q ss_conf 98888235799999999707751898505445345325899999999998533586899815462344689998741070
Q gi|254780676|r 110 PQPLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKP 189 (329)
Q Consensus 110 P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~p 189 (329)
....+.+|-.++|++..++|.+++=+.+... + ....+.+++|.+......+-.. .+.+.+.++..++++.
T Consensus 55 g~~fs~e~K~~i~~~L~~~GV~~IEvG~p~~------~-~~~~~~~~~i~~~~~~~~~~~~---~r~~~~d~~~a~~~g~ 124 (423)
T 3ivs_A 55 NAFFDTEKKIQIAKALDNFGVDYIELTSPVA------S-EQSRQDCEAICKLGLKCKILTH---IRCHMDDARVAVETGV 124 (423)
T ss_dssp TCCCCHHHHHHHHHHHHHHTCSEEEECCTTS------C-HHHHHHHHHHHTSCCSSEEEEE---EESCHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEECCCC------C-HHHHHHHHHHHHHCCHHHHHHH---HHCCHHHHHHHHHCCC
T ss_conf 9998999999999999981979899966847------8-3679999999870460353554---6438076999998698
Q ss_pred HHHHHCCCCCCCCCCCC--C-CCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCH
Q ss_conf 23320138300027563--8-9703589999999999708916701404887642068899999999966993997502
Q gi|254780676|r 190 DVFNHNLETVASNYLMV--R-PGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQ 265 (329)
Q Consensus 190 dV~nHNiETV~rLy~~V--R-p~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQ 265 (329)
+.++--+-+.+.+-... + .....+.-.++++++|+.|..+. -++|-+-.-..+++.++++.+.++|+|.+.|.-
T Consensus 125 ~~v~i~~~~s~~~~~~~~~~~~~~~l~~~~~~v~~ak~~G~~V~--~~~ed~~~~~~~~l~~~~~~~~~~Gad~i~laD 201 (423)
T 3ivs_A 125 DGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVR--FSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIAD 201 (423)
T ss_dssp SEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEE--EEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE--EEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 96899854529999998621299999999999988750586111--201445577689999999887613987135456
No 13
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=90.49 E-value=1.1 Score=24.82 Aligned_cols=91 Identities=21% Similarity=0.254 Sum_probs=65.8
Q ss_pred CCC-CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHC
Q ss_conf 998-8882357999999997077518985054453453258999999999985335868998154623446899987410
Q gi|254780676|r 109 KPQ-PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSA 187 (329)
Q Consensus 109 ~P~-~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A 187 (329)
+|. |+-++|-..-|.+..+-|-.=+=+--=|-|..+-.-+..|.++|.+||+.+|+..|-+-+.....-.+....+.+.
T Consensus 22 ~P~lPiTp~Eia~~A~~c~~AGAsivHlH~Rd~dg~~s~d~~~y~e~i~~iR~~~p~~ii~~Tt~g~~~~~~~~~~~~~~ 101 (275)
T 3no5_A 22 NPAVPITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAGNERGAMLSL 101 (275)
T ss_dssp CTTSCCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCCGGGGTTGGG
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHC
T ss_conf 99998998999999999998177489988538998967899999999999998668835630366565647777666501
Q ss_pred CCHHHHHCCCCC
Q ss_conf 702332013830
Q gi|254780676|r 188 KPDVFNHNLETV 199 (329)
Q Consensus 188 ~pdV~nHNiETV 199 (329)
+||...=|+-++
T Consensus 102 ~Pe~~s~~~~s~ 113 (275)
T 3no5_A 102 RPDMASLATGSV 113 (275)
T ss_dssp CCSEEEEECSCE
T ss_pred CCCCCCCCCCCC
T ss_conf 855355664355
No 14
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=89.50 E-value=1.3 Score=24.28 Aligned_cols=92 Identities=13% Similarity=0.165 Sum_probs=64.6
Q ss_pred CCC-CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHC
Q ss_conf 998-8882357999999997077518985054453453258999999999985335868998154623446899987410
Q gi|254780676|r 109 KPQ-PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSA 187 (329)
Q Consensus 109 ~P~-~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A 187 (329)
+|. |+-++|-..-|.+...-|-.=+=+-.=|-|..+-.-+..|.+++.+||+.+|+..|.+-+-.-....+....+.+.
T Consensus 26 ~P~lP~TpeEia~~A~~c~~AGAsivH~H~Rd~~G~~sld~~~y~e~i~~ir~~~p~~ii~~tt~g~~~~~e~r~~~~~~ 105 (284)
T 3chv_A 26 NPAVPITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGMLPL 105 (284)
T ss_dssp CTTCCCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTGGG
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHC
T ss_conf 99998998999999999998188689986418993977788999999999998678028975578777607887653212
Q ss_pred CCHHHHHCCCCCC
Q ss_conf 7023320138300
Q gi|254780676|r 188 KPDVFNHNLETVA 200 (329)
Q Consensus 188 ~pdV~nHNiETV~ 200 (329)
+|+...=|+-++-
T Consensus 106 ~p~~~s~~~~s~n 118 (284)
T 3chv_A 106 KPDMASLSVGSNN 118 (284)
T ss_dssp CCSEEEECCSCEE
T ss_pred CCCCCCCCCCCCC
T ss_conf 3565546644345
No 15
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=87.49 E-value=1.8 Score=23.40 Aligned_cols=127 Identities=9% Similarity=-0.000 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCC
Q ss_conf 57999999997077518985054453453258999999999985335868998154623446899987410702332013
Q gi|254780676|r 117 EPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNL 196 (329)
Q Consensus 117 EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNi 196 (329)
.|..+++.+.+.|..++.+-+.. |.....++++.+++.+..+.++++.++ ..+....+.+.+.+.+.-++
T Consensus 68 i~~~~~~~~~~~gad~itvh~~~-------g~~~i~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~ 137 (216)
T 1q6o_A 68 AGKILSRMCFEANADWVTVICCA-------DINTAKGALDVAKEFNGDVQIELTGYW---TWEQAQQWRDAGIGQVVYHR 137 (216)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTS-------CHHHHHHHHHHHHHTTCEEEEEECSCC---CHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEECCCC-------CHHHHHHHHHHHHHHCCCCEEEECCCC---CHHHHHHHHHCCCCCEEEEC
T ss_conf 37799999998499999981317-------879999999998752221123106999---89999988866823210210
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHC
Q ss_conf 83000275638970358999999999970891670140488764206889999999996699399750222
Q gi|254780676|r 197 ETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYL 267 (329)
Q Consensus 197 ETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL 267 (329)
-.-...+. ......+++.++..+..+. .+.++-|-+.+. ..+..++|+|++-+|--+
T Consensus 138 ~~~~~~~~----~~~~~~~~~~i~~~~~~~~------~i~~~gGi~~~~----~~~~~~~Gad~iVVGr~I 194 (216)
T 1q6o_A 138 SRDAQAAG----VAWGEADITAIKRLSDMGF------KVTVTGGLALED----LPLFKGIPIHVFIAGRSI 194 (216)
T ss_dssp CHHHHHTT----CCCCHHHHHHHHHHHHTTC------EEEEESSCCGGG----GGGGTTSCCSEEEESHHH
T ss_pred CCCCCCCC----EECCHHHHHHHHHHHCCCC------EEEECCCCCCCC----HHHHHHCCCCEEEECHHH
T ss_conf 24358788----7378889999999846897------387689988036----999998599999988254
No 16
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, PSI, MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=87.08 E-value=1.9 Score=23.24 Aligned_cols=150 Identities=13% Similarity=0.071 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC-HHHHHHHHHCCCHHH
Q ss_conf 8235799999999707751898505445345325899999999998533586899815462344-689998741070233
Q gi|254780676|r 114 DPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRK-PHALEKVVSAKPDVF 192 (329)
Q Consensus 114 D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~-~~al~~v~~A~pdV~ 192 (329)
.++--..+.+.++++|++-.+.|+-.. .+ +.+..+...... +.-|+.+- .+.-+
T Consensus 17 ~~~~l~ei~~~~k~~g~~~~l~TNG~l---~~-------e~~~~~~~~~d~-----~~~sl~~~~~e~~~---------- 71 (182)
T 3can_A 17 HPEFLIDILKRCGQQGIHRAVDTTLLA---RK-------ETVDEVMRNCEL-----LLIDLKSMDSTVHQ---------- 71 (182)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECTTCC---CH-------HHHHHHHHTCSE-----EEEECCCSCHHHHH----------
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC---CH-------HHHHHHHHHHHH-----EECCCCCCCHHHHH----------
T ss_conf 887999999999887991999817752---48-------999985432232-----54142336899999----------
Q ss_pred HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCC--EEECCHHCCCC
Q ss_conf 2013830002756389703589999999999708916701404887642068899999999966993--99750222786
Q gi|254780676|r 193 NHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVD--FLTMGQYLQPT 270 (329)
Q Consensus 193 nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvd--ilTiGQYL~Ps 270 (329)
.++ +.++++-++.++.+++.+..+....-+|-|.-.+.+|+.+..+-+.+.+.. .+.+-+|-...
T Consensus 72 ------------~i~-g~~~~~v~~~i~~l~~~~~~v~~~~~vi~~~~~~~~~i~~l~~~i~~~~~~~~~i~~~~~~~~~ 138 (182)
T 3can_A 72 ------------TFC-DVPNELILKNIRRVAEADFPYYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIINLLPYHDIG 138 (182)
T ss_dssp ------------HHH-SSCSHHHHHHHHHHHHTTCCEEEEEEECBTTTCSHHHHHHHHHHHHHSSSCCSEEEEEECCC--
T ss_pred ------------HHH-CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
T ss_conf ------------884-9988999988999997198505789887886599999999999998569981389987676455
Q ss_pred CC---------CCCCC--CCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 10---------07800--023846999999999974962434
Q gi|254780676|r 271 RK---------HHKVE--SFVTPQDFKSYETIAYSKGFLMVS 301 (329)
Q Consensus 271 ~~---------h~pV~--ryv~P~eF~~~~~~a~~~Gf~~V~ 301 (329)
.. .++-. ...+.++.+++++++.+.||....
T Consensus 139 ~~~~~~l~~~~~~~~~~~~~p~~e~~~~~~~~~~~~G~~v~i 180 (182)
T 3can_A 139 KGKHAKLGSIYNPKGYKMQTPSEEVQQQCIQILTDYGLKATI 180 (182)
T ss_dssp ----------------CCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 236887086355557878999999999999999975990784
No 17
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid biosynthesis, cytoplasm, lysine biosynthesis; HET: AKG; 1.80A {Thermus thermophilus HB27} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=86.08 E-value=2.1 Score=22.88 Aligned_cols=140 Identities=9% Similarity=0.009 Sum_probs=58.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHH
Q ss_conf 88823579999999970775189850544534532589999999999853358689981546234468999874107023
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDV 191 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV 191 (329)
....++-.++|++..++|++++=++|... .....+.++.+........+-.. .+.+.+..+..++++.+.
T Consensus 21 ~fs~~~k~~i~~~L~~~Gv~~IEvG~P~~-------~p~~~~~~~~l~~~~~~~~v~~~---~~~~~~~~~~a~~~~~~~ 90 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVA-------SPQSRKDAEVLASLGLKAKVVTH---IQCRLDAAKVAVETGVQG 90 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTS-------CHHHHHHHHHHHTSCCSSEEEEE---EESCHHHHHHHHHTTCSE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCCC-------CHHHHHHHHHHHHCCCCCCCEEH---HHCCCCHHHHHHHCCCCE
T ss_conf 98999999999999981989999878837-------87889999999862886322000---101650468887447735
Q ss_pred HHHCCCCCCCCCC-CCCC-CCHHHHHHHHHHHHHHCCCEEEECCCEEEE-EEECHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 3201383000275-6389-703589999999999708916701404887-6420688999999999669939975
Q gi|254780676|r 192 FNHNLETVASNYL-MVRP-GARYFHSLRLLQRVKELDPLIFTKSGIMLG-LGETRNEILQLMDDLRTADVDFLTM 263 (329)
Q Consensus 192 ~nHNiETV~rLy~-~VRp-~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvG-LGEt~eEi~e~l~DLr~~gvdilTi 263 (329)
.+.-+-+.+-+.. ..+. ....+...+.++++++.+..+. -.++.- -..++++.+..+....+.|+|.+.|
T Consensus 91 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~v~~a~~~g~~~~--v~~~~~~~~~~~~~~l~~~~~~~~~gad~I~l 163 (382)
T 2ztj_A 91 IDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVE--VRFSAEDTFRSEEQDLLAVYEAVAPYVDRVGL 163 (382)
T ss_dssp EEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSE--EEEEETTTTTSCHHHHHHHHHHHGGGCSEEEE
T ss_pred EEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCE--EEEECCCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 89997056899988503199999999999999997277506--88612556675388999999987500527998
No 18
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiative, PSI-2; 2.81A {Galdieria sulphuraria}
Probab=85.52 E-value=2.3 Score=22.70 Aligned_cols=125 Identities=9% Similarity=0.083 Sum_probs=74.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCC-EEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCC--CCHHH
Q ss_conf 4467899888823579999999970775-18985054453453258999999999985335868998154623--44689
Q gi|254780676|r 104 NVATGKPQPLDPQEPENISWAVRSMKLS-HVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFL--RKPHA 180 (329)
Q Consensus 104 ~V~~G~P~~~D~~EP~rvA~av~~l~Lk-~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~--G~~~a 180 (329)
.+++..+........+++.++++++++. .+++.|-+. +.++.+++.+|++.+-.|+..+. ...+.
T Consensus 114 EiK~~~~~~~~~~~~~~v~~~i~~~~~~~rv~~~Sf~~------------~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~ 181 (258)
T 2o55_A 114 ELKGEEWKRKESGDHQRLLLLVEKYHMQERVDYCSFHH------------EALAHLKALCPDVKITYLFNYMGQPTPLDF 181 (258)
T ss_dssp EECCSSSSSTTSSHHHHHHHHHHTTTCGGGEEEEESSH------------HHHHHHHHHCTTCEEEEECCTTSCCCCTTH
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCH------------HHHHHHHHHCCCCEEEEEECCCCCCCHHHH
T ss_conf 50575322210278999999999717422576566999------------999999987899719999604666786779
Q ss_pred HHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEE-EECHHHHHHHHHHHHHCCCC
Q ss_conf 99874107023320138300027563897035899999999997089167014048876-42068899999999966993
Q gi|254780676|r 181 LEKVVSAKPDVFNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGL-GETRNEILQLMDDLRTADVD 259 (329)
Q Consensus 181 l~~v~~A~pdV~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGL-GEt~eEi~e~l~DLr~~gvd 259 (329)
++.....+.+.++-+. ..+ +-+.++.+++.|..+.+=+ +.- ..+.++ |..|.+.|||
T Consensus 182 ~~~~~~~~~~~i~~~~-------~~l--------~~~~v~~~~~~Gl~v~vwT---v~~~~n~~~~----~~~l~~~GVd 239 (258)
T 2o55_A 182 VEQACYGDANGVSMLF-------HYL--------TKEQVCTAHEKGLSVTVWM---PWIFDDSEED----WKKCLELQVD 239 (258)
T ss_dssp HHHHHHTTCSEEEEEG-------GGC--------CHHHHHHHHHTTCEEEEEC---CTTCCCCHHH----HHHHHHHTCS
T ss_pred HHHHHHCCCCEEECCC-------CCC--------CHHHHHHHHHCCCEEEEEE---CCCCCCCHHH----HHHHHHCCCC
T ss_conf 9998852674774133-------118--------9999999998699899994---7788985999----9999968999
Q ss_pred EEE
Q ss_conf 997
Q gi|254780676|r 260 FLT 262 (329)
Q Consensus 260 ilT 262 (329)
.++
T Consensus 240 gI~ 242 (258)
T 2o55_A 240 LIC 242 (258)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 999
No 19
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=84.22 E-value=2.6 Score=22.31 Aligned_cols=143 Identities=10% Similarity=-0.009 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH-HHHHHHHCCCHH
Q ss_conf 8823579999999970775189850544534532589999999999853358689981546234468-999874107023
Q gi|254780676|r 113 LDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPH-ALEKVVSAKPDV 191 (329)
Q Consensus 113 ~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~-al~~v~~A~pdV 191 (329)
.+.++-..++++..++|++++-++|... ... ..+.+.++....+...+..+..-...... ..+.+..++.+.
T Consensus 25 ~~~e~k~~i~~~L~~aGv~~IEvG~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGFPVS------SPG-DFNSVVEITKAVTRPTICALTRAKEADINIAGEALRFAKRSR 97 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEECTTS------CHH-HHHHHHHHHHHCCSSEEEEECCSCHHHHHHHHHHHTTCSSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCC------CHH-HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCE
T ss_conf 8999999999999986979899978979------989-999999998631566166663012124677699997558867
Q ss_pred HHHCCCCCCCCCCCCC---CCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECC
Q ss_conf 3201383000275638---970358999999999970891670140488764206889999999996699399750
Q gi|254780676|r 192 FNHNLETVASNYLMVR---PGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMG 264 (329)
Q Consensus 192 ~nHNiETV~rLy~~VR---p~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiG 264 (329)
+...+.+++....... ....-+......+.+++.+..+. -++|-+---+.+++.+.++.+.+.|+|.+.|.
T Consensus 98 v~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~--~~~~~~~~~~~~~~~~~~~~~~~~G~d~I~l~ 171 (325)
T 3eeg_A 98 IHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVE--FFCEDAGRADQAFLARMVEAVIEAGADVVNIP 171 (325)
T ss_dssp EEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEE--EEEETGGGSCHHHHHHHHHHHHHHTCSEEECC
T ss_pred EEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEE--EEECCCCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 997257649999999735899999999998888875142367--73045542079999999999998599999954
No 20
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa PAO1}
Probab=82.54 E-value=3 Score=21.85 Aligned_cols=147 Identities=11% Similarity=0.071 Sum_probs=90.1
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCC
Q ss_conf 98888235799999999707751898505445345325899999999998533586899815462344689998741070
Q gi|254780676|r 110 PQPLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKP 189 (329)
Q Consensus 110 P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~p 189 (329)
......++-.+++++..++|..++-+.+-..... .+......-+..-....|.+..-.+.+. ...++..+..+.
T Consensus 24 ~~~~~~~~k~~i~~~l~~~Gi~~IEvG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~a~~~~~ 97 (302)
T 2ftp_A 24 KQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKW--VPQMAGSAEVFAGIRQRPGVTYAALAPN----LKGFEAALESGV 97 (302)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTT--CGGGTTHHHHHHHSCCCTTSEEEEECCS----HHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCH--HHHHCCHHHHHHHCCCCCCCHHHHHCCC----CHHHHHHHHCCC
T ss_conf 9988999999999999974979899788758440--3442108999975233554322320023----147999983699
Q ss_pred HHHHHCCCCCCCCCC-CCC-C-CCHHHHHHHHHHHHHHCCCEEEECCCEEEEEE------ECHHHHHHHHHHHHHCCCCE
Q ss_conf 233201383000275-638-9-70358999999999970891670140488764------20688999999999669939
Q gi|254780676|r 190 DVFNHNLETVASNYL-MVR-P-GARYFHSLRLLQRVKELDPLIFTKSGIMLGLG------ETRNEILQLMDDLRTADVDF 260 (329)
Q Consensus 190 dV~nHNiETV~rLy~-~VR-p-~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLG------Et~eEi~e~l~DLr~~gvdi 260 (329)
+.+.--+.+.+.+-. .++ . ....++..+.++.+++.+..+. -+++...+ -+.+++.+....+.+.|+|.
T Consensus 98 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~ 175 (302)
T 2ftp_A 98 KEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVR--GYISCVLGCPYDGDVDPRQVAWVARELQQMGCYE 175 (302)
T ss_dssp CEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEE--EEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSE
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE--EEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCEE
T ss_conf 88999730549999887630088899878899999986200110--3331025777555310899999999999659736
Q ss_pred EECC
Q ss_conf 9750
Q gi|254780676|r 261 LTMG 264 (329)
Q Consensus 261 lTiG 264 (329)
+.|-
T Consensus 176 i~l~ 179 (302)
T 2ftp_A 176 VSLG 179 (302)
T ss_dssp EEEE
T ss_pred ECCC
T ss_conf 4257
No 21
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=82.26 E-value=3 Score=21.78 Aligned_cols=159 Identities=10% Similarity=0.089 Sum_probs=83.1
Q ss_pred CCCHHHHHHHHH-HHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE--EEECCCCCCCHHHHHHHHHCC
Q ss_conf 888235799999-99970775189850544534532589999999999853358689--981546234468999874107
Q gi|254780676|r 112 PLDPQEPENISW-AVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTI--EVLTPDFLRKPHALEKVVSAK 188 (329)
Q Consensus 112 ~~D~~EP~rvA~-av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~I--EvLiPDf~G~~~al~~v~~A~ 188 (329)
....+|-.++++ ++.++|.+++-+.+..-. .+-...+.+.........+...+ -.+.+ +...++.+.+++
T Consensus 37 ~fs~e~k~~i~~~lL~~~Gv~~IEvG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~g 109 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVS---KGELETVQKIMEWAATEQLTERIEILGFVD----GNKTVDWIKDSG 109 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSC---TTHHHHHHHHHHHHHHTTCGGGEEEEEESS----TTHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEECCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CHHHHHHHHHCC
T ss_conf 9899999999999999849798997887668---678888999999852300333456876501----337899998569
Q ss_pred CHHHHHCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHCCCEEEECCCEEE---EEEECHHHHHHHHHHHHHCCCCEEE
Q ss_conf 02332013830002756389---70358999999999970891670140488---7642068899999999966993997
Q gi|254780676|r 189 PDVFNHNLETVASNYLMVRP---GARYFHSLRLLQRVKELDPLIFTKSGIML---GLGETRNEILQLMDDLRTADVDFLT 262 (329)
Q Consensus 189 pdV~nHNiETV~rLy~~VRp---~a~Y~rSL~vL~~aK~~~~~i~TKSGlMv---GLGEt~eEi~e~l~DLr~~gvdilT 262 (329)
.++++.-+.+.+.+-..... ....+...+..+++++.|..+. -++|- +.-...+.+.+.+..+.+.|+|.+.
T Consensus 110 ~~~i~~~~~~s~~~~~~~~~~~~~~~l~~~~~~~~~a~~~g~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Gad~I~ 187 (337)
T 3ble_A 110 AKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKIN--VYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIF 187 (337)
T ss_dssp CCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEE--EEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEE--EECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 987864256679999999749999999999999999986397576--520235666667789998899999875113520
Q ss_pred CCHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 502227861007800023846999999
Q gi|254780676|r 263 MGQYLQPTRKHHKVESFVTPQDFKSYE 289 (329)
Q Consensus 263 iGQYL~Ps~~h~pV~ryv~P~eF~~~~ 289 (329)
|.- |- -..+|+++.++=
T Consensus 188 l~D----T~------G~~~P~~v~~lv 204 (337)
T 3ble_A 188 LPD----TL------GVLSPEETFQGV 204 (337)
T ss_dssp EEC----TT------CCCCHHHHHHHH
T ss_pred CCC----CC------CCCCHHHHHHHH
T ss_conf 365----11------347868999999
No 22
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transferase; HET: KCX; 1.90A {Propionibacterium freudenreichiisubsp} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=80.21 E-value=3.6 Score=21.31 Aligned_cols=75 Identities=16% Similarity=0.134 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC-CCEEEEECCCCCCCHH-HHHHHHHCCCHH
Q ss_conf 82357999999997077518985054453453258999999999985335-8689981546234468-999874107023
Q gi|254780676|r 114 DPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAP-STTIEVLTPDFLRKPH-ALEKVVSAKPDV 191 (329)
Q Consensus 114 D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P-~~~IEvLiPDf~G~~~-al~~v~~A~pdV 191 (329)
+++.-..+|+.+..+|..-+.|---.= =.--....+.|++||+..| .+.|++=.-|-.|.-- ..-.-++||.|+
T Consensus 173 ~~~~~~~~a~~l~~~Gad~I~l~Dt~G----~~~P~~v~~lv~~lk~~~~~~~~i~~H~Hnt~Gla~An~laAieaGad~ 248 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALKDMAA----LLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDV 248 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTC----CCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC----CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCE
T ss_conf 899999999998725987899558666----6589999999999998658644325663488762999999999859999
Q ss_pred H
Q ss_conf 3
Q gi|254780676|r 192 F 192 (329)
Q Consensus 192 ~ 192 (329)
+
T Consensus 249 v 249 (539)
T 1rqb_A 249 V 249 (539)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 23
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics, PSI; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=79.99 E-value=3.6 Score=21.26 Aligned_cols=124 Identities=14% Similarity=0.199 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHCC-CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCC
Q ss_conf 7999999997077-518985054453453258999999999985335868998154623446899987410702332013
Q gi|254780676|r 118 PENISWAVRSMKL-SHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNL 196 (329)
Q Consensus 118 P~rvA~av~~l~L-k~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNi 196 (329)
+.++++.+++.++ +.+++.|-+. +.++++|+..|+..+-.|........ .......+ ..+++.
T Consensus 114 ~~~v~~li~~~~~~~~v~i~Sf~~------------~~l~~i~~~~P~~~~~~l~~~~~~~~-~~~~~~~~--~~~~~~- 177 (248)
T 1zcc_A 114 PAKVAALVRHLGMVRDTFYFSFSE------------EMRQGLQSIAPEFRRMMTLDIAKSPS-LVGAVHHA--SIIEIT- 177 (248)
T ss_dssp HHHHHHHHHHHTCSTTEEEECSCH------------HHHHHHHHHCTTSEEEEEHHHHSSTH-HHHHTTCC--SEEEEC-
T ss_pred HHHHHHHHHHHHHCCCEEEECCCH------------HHHHHHHHHCCCCCEEEEEECCCCHH-HHHHHHCC--CEEEEC-
T ss_conf 178999999985324546755999------------99999998688988899960566704-56776327--765422-
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCCCCCCCCCC
Q ss_conf 83000275638970358999999999970891670140488764206889999999996699399750222786100780
Q gi|254780676|r 197 ETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQPTRKHHKV 276 (329)
Q Consensus 197 ETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~Ps~~h~pV 276 (329)
...-.+-++++++++.|..+.+=+ . .+-.+.++.|.+.|||.++--
T Consensus 178 -------------~~~~~~~~~v~~~~~~G~~v~vwT------v---nd~~~~~~~l~~~GVDgI~TD------------ 223 (248)
T 1zcc_A 178 -------------PAQMRRPGIIEASRKAGLEIMVYY------G---GDDMAVHREIATSDVDYINLD------------ 223 (248)
T ss_dssp -------------HHHHHSHHHHHHHHHHTCEEEEEC------C---CCCHHHHHHHHHSSCSEEEES------------
T ss_pred -------------HHHHCCHHHHHHHHHCCCEEEEEC------C---CCHHHHHHHHHHCCCCEEEEC------------
T ss_conf -------------765279999999998799899977------6---998999999997699999968------------
Q ss_pred CCCCCHHHHHHHHHHHHHC
Q ss_conf 0023846999999999974
Q gi|254780676|r 277 ESFVTPQDFKSYETIAYSK 295 (329)
Q Consensus 277 ~ryv~P~eF~~~~~~a~~~ 295 (329)
.|+.|..+++.-.++
T Consensus 224 ----~P~~~~~vr~~~~~~ 238 (248)
T 1zcc_A 224 ----RPDLFAAVRSGMAEL 238 (248)
T ss_dssp ----CHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHC
T ss_conf ----699999999988861
No 24
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=77.17 E-value=4.3 Score=20.69 Aligned_cols=171 Identities=12% Similarity=0.134 Sum_probs=89.8
Q ss_pred HHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
Q ss_conf 89999999974982365257887876750897269998665223535223446789988882357999999997077518
Q gi|254780676|r 54 YKETYNILRSRNLTTVCEEAGCPNIGECWNKNHATFMILGAICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKLSHV 133 (329)
Q Consensus 54 ~~~~~~~l~~~~L~TVCeeA~CPNi~ECw~~gtATFMilG~~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~Lk~v 133 (329)
...+-.+|+++++ .|||.+.|+.... .|..+.+.+ .-|-. +
T Consensus 58 ~~~iL~~L~~~~i-------------------~aTfFv~g~~~~~------------------~~~~~~~~~-~~Ghe-I 98 (240)
T 1ny1_A 58 TPKVLDVLKKHRV-------------------TGTFFVTGHFVKD------------------QPQLIKRMS-DEGHI-I 98 (240)
T ss_dssp HHHHHHHHHHTTC-------------------CCEEEECHHHHHH------------------CHHHHHHHH-HTTCE-E
T ss_pred HHHHHHHHHHCCC-------------------CEEEEEHHHHHHH------------------CHHHHHHHH-HCCCE-E
T ss_conf 8999999998599-------------------8899832344555------------------989999998-58988-9
Q ss_pred EEECCCCCCCCCCHHHH----HHHHHHHHHHHCCCCEEEEEC-CCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 98505445345325899----999999998533586899815-4623446899987410702332013830002756389
Q gi|254780676|r 134 VITSVDRDDLDDGGAQH----FAEVISAIRESAPSTTIEVLT-PDFLRKPHALEKVVSAKPDVFNHNLETVASNYLMVRP 208 (329)
Q Consensus 134 ViTSV~RDDL~DgGA~h----fa~~I~~Ir~~~P~~~IEvLi-PDf~G~~~al~~v~~A~pdV~nHNiETV~rLy~~VRp 208 (329)
-.-|.+..++....... +.++.+.|++......+-..- |-..-+.+.++.+.+.|-.+..-|+.+..- ..+.
T Consensus 99 gnHt~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G~~~~~~~rpP~g~~~~~~~~~l~~~Gy~~v~w~~~~~Dw---~~~~ 175 (240)
T 1ny1_A 99 GNHSFHHPDLTTKTADQIQDELDSVNEEVYKITGKQDNLYLRPPRGVFSEYVLKETKRLGYQTVFWSVAFVDW---KINN 175 (240)
T ss_dssp EECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSCCCCCEECCGGGEECHHHHHHHHHTTCEEBCCSBCCSCC---CGGG
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEEEECCCC---CCCC
T ss_conf 8435556870107989999999999999999738757658869989877899999998599799877446885---5456
Q ss_pred CCHHHHHHHHHHHH-HHCCCEEEECCCEEEEE---EE-CHHHHHHHHHHHHHCCCCEEECCHHCCCCCCCCC
Q ss_conf 70358999999999-97089167014048876---42-0688999999999669939975022278610078
Q gi|254780676|r 209 GARYFHSLRLLQRV-KELDPLIFTKSGIMLGL---GE-TRNEILQLMDDLRTADVDFLTMGQYLQPTRKHHK 275 (329)
Q Consensus 209 ~a~Y~rSL~vL~~a-K~~~~~i~TKSGlMvGL---GE-t~eEi~e~l~DLr~~gvdilTiGQYL~Ps~~h~p 275 (329)
..+-+... +.+ +.. +.|-++=| .+ |-+-+-+.+.-|++-|..++|+.|+|+....-+|
T Consensus 176 ~~~~~~~~---~~~~~~~------~~g~IiL~Hd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ell~~~~~~~p 238 (240)
T 1ny1_A 176 QKGKKYAY---DHMIKQA------HPGAIYLLHTVSRDNAEALDDAITDLKKQGYTFKSIDDLMFEKEMRLP 238 (240)
T ss_dssp CCCHHHHH---HHHHHTC------CTTEEEEECSCSTTHHHHHHHHHHHHHHHTCEEECHHHHHHHHHC---
T ss_pred CHHHHHHH---HHHHHCC------CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCC
T ss_conf 36599999---9999567------999089974899569999999999999789999886995517232689
No 25
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=76.58 E-value=4.5 Score=20.58 Aligned_cols=165 Identities=10% Similarity=0.018 Sum_probs=83.9
Q ss_pred HHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEEEEEC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf 8999999997498236525788787675089726999866-522353522344678998888235799999999707751
Q gi|254780676|r 54 YKETYNILRSRNLTTVCEEAGCPNIGECWNKNHATFMILG-AICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKLSH 132 (329)
Q Consensus 54 ~~~~~~~l~~~~L~TVCeeA~CPNi~ECw~~gtATFMilG-~~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~Lk~ 132 (329)
...+-.+|+++++ .|||.+.| ...- .+.|.- .+.+..-| |
T Consensus 41 t~~iLd~L~~~~v-------------------kATFF~~~g~~~~-----------------~~~~~~-~k~~~~~G--H 81 (254)
T 2vyo_A 41 TDRILNTLDELGV-------------------KATFSFTVNQKAV-----------------GNVGQL-YRRAVEEG--H 81 (254)
T ss_dssp HHHHHHHHHHHTC-------------------CCEEEECCSSCCC-----------------GGGTHH-HHHHHHTT--C
T ss_pred HHHHHHHHHHCCC-------------------CEEEEEECCHHHH-----------------HCCHHH-HHHHHHCC--C
T ss_conf 8999999998399-------------------8899997681565-----------------505999-99999869--9
Q ss_pred EE-EECCCCCC--CCCCH----HHHHHHHHHHHHHHCCCCEEEEECCCCCC--CHHHHHHHHHCCCHHHHHCCCCCCCCC
Q ss_conf 89-85054453--45325----89999999999853358689981546234--468999874107023320138300027
Q gi|254780676|r 133 VV-ITSVDRDD--LDDGG----AQHFAEVISAIRESAPSTTIEVLTPDFLR--KPHALEKVVSAKPDVFNHNLETVASNY 203 (329)
Q Consensus 133 vV-iTSV~RDD--L~DgG----A~hfa~~I~~Ir~~~P~~~IEvLiPDf~G--~~~al~~v~~A~pdV~nHNiETV~rLy 203 (329)
.+ .-|.+.-| +.... ...+.++.+.|++.......-.--|-..| +.+.++.+.+.+-.++.-|+.+-
T Consensus 82 eIgnHt~~H~~~~~~~~s~~~~~~ei~~~~~~i~~~~G~~~~~fR~Py~~g~~~~~~~~~l~~~g~~~v~w~v~~~---- 157 (254)
T 2vyo_A 82 NVALRVDPSMDEGYQCLSQDALENNVDREIDTIDGLSGTEIRYAAVPICNGQVNSEMYNILTERGVLPVGYTFCPY---- 157 (254)
T ss_dssp EEEEECCGGGTTCGGGSCHHHHHHHHHHHHHHHHHHHTSCCCEEECCCBTTEECHHHHHHHHTTTCEECCCSBCGG----
T ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCH----
T ss_conf 7995788777732244999999999999999999961998877838875788898999999977998999620521----
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEE----EECHHHHHHHHHHHHHCCCCEEECCHHCCCC
Q ss_conf 563897035899999999997089167014048876----4206889999999996699399750222786
Q gi|254780676|r 204 LMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGL----GETRNEILQLMDDLRTADVDFLTMGQYLQPT 270 (329)
Q Consensus 204 ~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGL----GEt~eEi~e~l~DLr~~gvdilTiGQYL~Ps 270 (329)
+|+......+.+..... ..+.|-++=| -.|-+-+-..+.-|++-|..++|+.+.|+.-
T Consensus 158 -------D~~~~~~~~~~~~~~~~--~~~~g~IiL~Hd~~~~t~~aL~~iI~~lk~~Gy~fvTl~ell~~~ 219 (254)
T 2vyo_A 158 -------DYDDPVGEFESMIEGSD--PKHHSFIILMHDGQEADTSRLENMVKIGKDKGYRFVNMDECLQGY 219 (254)
T ss_dssp -------GSSSHHHHHHHHHHTSC--TTTCCEEEEEEGGGGSSCHHHHHHHHHHHHHTCEECCHHHHTTTC
T ss_pred -------HHCCCCCHHHHHHHHHH--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCC
T ss_conf -------20275417999999972--579997999768967589999999999998899998889975466
No 26
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, biotin enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=74.84 E-value=5 Score=20.27 Aligned_cols=74 Identities=9% Similarity=0.106 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH-HHHHHHHCCCHHH
Q ss_conf 823579999999970775189850544534532589999999999853358689981546234468-9998741070233
Q gi|254780676|r 114 DPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPH-ALEKVVSAKPDVF 192 (329)
Q Consensus 114 D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~-al~~v~~A~pdV~ 192 (329)
+.+.-..+++.+..+|..-+.|---.= -.-.....+.|++||+.. +..|++=.-|=.|..- ..-.-++||.++|
T Consensus 156 ~~~~~~~~~~~l~~~Gad~I~l~DT~G----~~~P~~v~~lv~~lk~~~-~~~i~~H~Hnt~Gla~AN~laAi~aGa~~i 230 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKDMAG----ILTPYAAEELVSTLKKQV-DVELHLHCHSTAGLADMTLLKAIEAGVDRV 230 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTS----CCCHHHHHHHHHHHHHHC-CSCEEEEECCTTSCHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC----CCCHHHHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHCCCCEE
T ss_conf 889999999988746984898359877----568789999999998627-876488868998629999999998499999
No 27
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, quinolinic acid; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=73.82 E-value=5.3 Score=20.10 Aligned_cols=91 Identities=22% Similarity=0.412 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHH-HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
Q ss_conf 9999999985335868998154623446899987410702332-013830002756389703589999999999708916
Q gi|254780676|r 151 FAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFN-HNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLI 229 (329)
Q Consensus 151 fa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~n-HNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i 229 (329)
+.+.+..+++..|+..|||.+.++ +.++..+++++|++= -|+ +-++--+..+..+..++++
T Consensus 181 i~~~~~~~~~~~~~~~i~vEv~~~----~e~~~a~~~gad~imLDn~--------------~pe~~~~~v~~~~~~~~~v 242 (284)
T 1qpo_A 181 VVDALRAVRNAAPDLPCEVEVDSL----EQLDAVLPEKPELILLDNF--------------AVWQTQTAVQRRDSRAPTV 242 (284)
T ss_dssp HHHHHHHHHHHCTTSCEEEEESSH----HHHHHHGGGCCSEEEEETC--------------CHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCCCEEEEECCH----HHHHHHHHHCCCEEEECCC--------------CHHHHHHHHHHHHCCCCCE
T ss_conf 899999999848998739998149----9888887513328995688--------------9799999999973769947
Q ss_pred EE-CCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCC
Q ss_conf 70-1404887642068899999999966993997502227
Q gi|254780676|r 230 FT-KSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQ 268 (329)
Q Consensus 230 ~T-KSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~ 268 (329)
.. =||.| +.+. +.++.+.|||++.+|-.-.
T Consensus 243 ~ieaSGGI-----~~~n----i~~ya~~GVD~Is~g~lt~ 273 (284)
T 1qpo_A 243 MLESSGGL-----SLQT----AATYAETGVDYLAVGALTH 273 (284)
T ss_dssp EEEEESSC-----CTTT----HHHHHHTTCSEEECGGGTS
T ss_pred EEEEECCC-----CHHH----HHHHHHCCCCEEECCHHHC
T ss_conf 99998999-----8999----9999866989998396755
No 28
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=70.94 E-value=6.1 Score=19.66 Aligned_cols=155 Identities=19% Similarity=0.207 Sum_probs=101.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH-HCCCCEEEEECCCCCCCHHHHHHHHHCCCH
Q ss_conf 8882357999999997077518985054453453258999999999985-335868998154623446899987410702
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRE-SAPSTTIEVLTPDFLRKPHALEKVVSAKPD 190 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~-~~P~~~IEvLiPDf~G~~~al~~v~~A~pd 190 (329)
..|.++...++++...-|++.+=||--+ ....+.|+++++ ..|+..|=+=+= -+.+.++..+++|.+
T Consensus 18 ~~~~~~a~~~~~al~~~Gi~~iEitl~~---------p~a~~~I~~l~~~~~~~~~vGaGTV---~~~~~~~~a~~aGa~ 85 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFTV---------PDADTVIKELSFLKEKGAIIGAGTV---TSVEQCRKAVESGAE 85 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETTS---------TTHHHHHHHTHHHHHTTCEEEEESC---CSHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCC---------CCHHHHHHHHHHHCCCCEEEEEECC---CCHHHHHHHHHCCCC
T ss_conf 9899999999999998799889996899---------7689999999973189828963000---127889999864874
Q ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEEC-------
Q ss_conf 3320138300027563897035899999999997089167014048876420688999999999669939975-------
Q gi|254780676|r 191 VFNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTM------- 263 (329)
Q Consensus 191 V~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTi------- 263 (329)
.+ |-|+.+ .++++++++.+.... -|.| |..|+.+++ +.|+|++-+
T Consensus 86 fi-------------vsP~~~----~~v~~~~~~~~~~~i--PGv~-----TptEi~~A~----~~G~~~vK~FPa~~~G 137 (205)
T 1wa3_A 86 FI-------------VSPHLD----EEISQFCKEKGVFYM--PGVM-----TPTELVKAM----KLGHTILKLFPGEVVG 137 (205)
T ss_dssp EE-------------ECSSCC----HHHHHHHHHHTCEEE--CEEC-----SHHHHHHHH----HTTCCEEEETTHHHHH
T ss_pred EE-------------ECCCCC----HHHHHHHHHCCCCCC--CCCC-----CCHHHHHHH----HCCCCEEEECCHHHCC
T ss_conf 88-------------679999----999999998399822--7748-----715899999----7699979745121047
Q ss_pred CHHCCCCCCCCCCCCC-----CCHHHHHHHHHHHHHCCCCEEE-CCCCCCCCH
Q ss_conf 0222786100780002-----3846999999999974962434-048300103
Q gi|254780676|r 264 GQYLQPTRKHHKVESF-----VTPQDFKSYETIAYSKGFLMVS-ASPLTRSSY 310 (329)
Q Consensus 264 GQYL~Ps~~h~pV~ry-----v~P~eF~~~~~~a~~~Gf~~V~-SgPlVRSSY 310 (329)
+.||+--+.-+|=.++ |+++...+|-+ .|...|. .+-|+...+
T Consensus 138 ~~~lk~l~~p~p~i~~iptGGV~~~n~~~~l~----aGa~avg~Gs~l~~~~~ 186 (205)
T 1wa3_A 138 PQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFK----AGVLAVGVGSALVKGTP 186 (205)
T ss_dssp HHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHH----HTCSCEEECHHHHCSCH
T ss_pred HHHHHHHHCCCCCCCEEEECCCCHHHHHHHHH----CCCEEEEECHHHCCCCH
T ss_conf 88999986658998488646998899999998----89929998367158999
No 29
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp}
Probab=70.65 E-value=6.2 Score=19.61 Aligned_cols=117 Identities=15% Similarity=0.108 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE--ECCCCCCCHHHHHHHHHCCCH
Q ss_conf 882357999999997077518985054453453258999999999985335868998--154623446899987410702
Q gi|254780676|r 113 LDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEV--LTPDFLRKPHALEKVVSAKPD 190 (329)
Q Consensus 113 ~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEv--LiPDf~G~~~al~~v~~A~pd 190 (329)
-|..+..+-.+.+++.+..++=+--.|---.|.-+- -.+.|++||+..+...+++ .+-+ -...++.+.++|+|
T Consensus 37 aD~~~l~~~i~~l~~~g~d~iHiDImDG~FVpn~t~--g~~~i~~ir~~~~~~~idvHLMv~~---P~~~i~~~~~~g~d 111 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTF--GPMVLKALRDYGITAGMDVHLMVKP---VDALIESFAKAGAT 111 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCC--CHHHHHHHHHHTCCSCEEEEEECSS---CHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC--CHHHHHHHHHHCCCCEEEEHHHCCC---HHHHHHHHHHCCCC
T ss_conf 789999999999997699989997504853765557--9899999997089840552101079---99999999867997
Q ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHH
Q ss_conf 3320138300027563897035899999999997089167014048876420688999999
Q gi|254780676|r 191 VFNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMD 251 (329)
Q Consensus 191 V~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~ 251 (329)
.+.=-.|+... -.++++.+|+.| .|.|+-+..+..-+++...+.
T Consensus 112 ~I~~H~E~~~~-------------~~~~i~~ik~~g----~k~Glalnp~T~i~~l~~~l~ 155 (246)
T 3inp_A 112 SIVFHPEASEH-------------IDRSLQLIKSFG----IQAGLALNPATGIDCLKYVES 155 (246)
T ss_dssp EEEECGGGCSC-------------HHHHHHHHHTTT----SEEEEEECTTCCSGGGTTTGG
T ss_pred EEEEECCCCCC-------------HHHHHHHHHHCC----CEEEEEECCCCCHHHHHHHHH
T ss_conf 99984202108-------------999999999819----817999637778999988764
No 30
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein structure initiative; 2.30A {Brucella melitensis 16M}
Probab=70.28 E-value=6.3 Score=19.56 Aligned_cols=143 Identities=9% Similarity=0.019 Sum_probs=90.3
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC-CCCHHHHHHHHHHHHH--HHCCCCEEEEECCCCCCCHHHHHHHHH
Q ss_conf 9888823579999999970775189850544534-5325899999999998--533586899815462344689998741
Q gi|254780676|r 110 PQPLDPQEPENISWAVRSMKLSHVVITSVDRDDL-DDGGAQHFAEVISAIR--ESAPSTTIEVLTPDFLRKPHALEKVVS 186 (329)
Q Consensus 110 P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL-~DgGA~hfa~~I~~Ir--~~~P~~~IEvLiPDf~G~~~al~~v~~ 186 (329)
......++-.++++...++|.+++-+.|...-.. ++ ++.+..... ...+++...++.+ ....++....
T Consensus 20 ~~~~~~~~k~~i~~~L~~aGv~~IEvG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 90 (295)
T 1ydn_A 20 KRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQ-----LADSREVMAGIRRADGVRYSVLVP----NMKGYEAAAA 90 (295)
T ss_dssp SSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGG-----GTTHHHHHHHSCCCSSSEEEEECS----SHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH-----HHHHHHHHHCCCCCCCCCHHHHCC----CCCHHHHHCC
T ss_conf 9998999999999999981999899816647743688-----888999875147765641756313----4310232102
Q ss_pred CCCHHHHHCCCCCCCCCCCCC--C-CCHHHHHHHHHHHHHHCCCEEEECCCEEEEE------EECHHHHHHHHHHHHHCC
Q ss_conf 070233201383000275638--9-7035899999999997089167014048876------420688999999999669
Q gi|254780676|r 187 AKPDVFNHNLETVASNYLMVR--P-GARYFHSLRLLQRVKELDPLIFTKSGIMLGL------GETRNEILQLMDDLRTAD 257 (329)
Q Consensus 187 A~pdV~nHNiETV~rLy~~VR--p-~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGL------GEt~eEi~e~l~DLr~~g 257 (329)
.+.+.++..+.+.+....... . ....++-.+..+.++..+..+. .++++.. .-+.+++.+....+.+.|
T Consensus 91 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 168 (295)
T 1ydn_A 91 AHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIR--GYVSCVVECPYDGPVTPQAVASVTEQLFSLG 168 (295)
T ss_dssp TTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEE--EEEECSSEETTTEECCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEE--EEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 58878999874267999999715578777776666665530352477--6655552255331033556665555442269
Q ss_pred CCEEEC
Q ss_conf 939975
Q gi|254780676|r 258 VDFLTM 263 (329)
Q Consensus 258 vdilTi 263 (329)
+|.+.+
T Consensus 169 ~~~I~l 174 (295)
T 1ydn_A 169 CHEVSL 174 (295)
T ss_dssp CSEEEE
T ss_pred CEEEEE
T ss_conf 649971
No 31
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; YP_293392.1, prokaryotic protein of unknown function (DUF849), structural genomics; HET: MSE; 1.72A {Ralstonia eutropha JMP134}
Probab=70.25 E-value=6.3 Score=19.55 Aligned_cols=141 Identities=14% Similarity=0.119 Sum_probs=81.8
Q ss_pred CC-CCCHHHHHHHHHHHHHHCCCEEEEECCCCCC-CCCCHHHHHHHHHHHHHHHCCCCEEEEECC-------C-------
Q ss_conf 98-8882357999999997077518985054453-453258999999999985335868998154-------6-------
Q gi|254780676|r 110 PQ-PLDPQEPENISWAVRSMKLSHVVITSVDRDD-LDDGGAQHFAEVISAIRESAPSTTIEVLTP-------D------- 173 (329)
Q Consensus 110 P~-~~D~~EP~rvA~av~~l~Lk~vViTSV~RDD-L~DgGA~hfa~~I~~Ir~~~P~~~IEvLiP-------D------- 173 (329)
|. |+-++|-..-|.+..+-|-.=+=+-.=|-|| -+..-+..|.++|.+||+.+|++.|-+-+. |
T Consensus 41 P~lP~TpeEia~~A~~c~~AGAsivHlHvRd~~dG~~s~D~~~y~e~i~~Ir~~~pd~ii~~TTg~~~~~~~~~~~~~~~ 120 (316)
T 3c6c_A 41 PSMPITPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRSSGTDIVLNLTCGLGAFLLPDPEDESKA 120 (316)
T ss_dssp TTCCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHTTTCCCEEEEECCCSEEECEETTEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCC
T ss_conf 99989999999999999982753899764578889857999999999999997679827984378566667670111103
Q ss_pred -----CCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHH
Q ss_conf -----23446899987410702332013830002756--38970358999999999970891670140488764206889
Q gi|254780676|r 174 -----FLRKPHALEKVVSAKPDVFNHNLETVASNYLM--VRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEI 246 (329)
Q Consensus 174 -----f~G~~~al~~v~~A~pdV~nHNiETV~rLy~~--VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi 246 (329)
...-.+.+..+....|+...-|+-+..-.... .--......--++++..++.| +..-++--+..-
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~Pe~~s~~~~s~n~~~~~~~~~~~n~~~~~~~~~~~~~e~g--------i~pe~e~yd~g~ 192 (316)
T 3c6c_A 121 LPESDVVPVAERVKHLEDCLPEIASLDITTGNQVEGKLEFVYLNTTRTLRAMARRFQELG--------IKPELEVFSPGD 192 (316)
T ss_dssp CTTCEECCHHHHTHHHHHHCCSEEEEECCCEEEEETTEEEEECCCHHHHHHHHHHHHHHT--------CEEEEEESSHHH
T ss_pred CCCCCCCCHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCC--------CEEEEEEECHHH
T ss_conf 565455788998523001586421466666554356545144188899999999999749--------845899976799
Q ss_pred HHHHHHHHHCCC
Q ss_conf 999999996699
Q gi|254780676|r 247 LQLMDDLRTADV 258 (329)
Q Consensus 247 ~e~l~DLr~~gv 258 (329)
++.+..|.+.|.
T Consensus 193 l~~~~~l~~~G~ 204 (316)
T 3c6c_A 193 ILFGKQLIEEGL 204 (316)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCC
T ss_conf 999999997589
No 32
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum 3D7} SCOP: c.1.2.2
Probab=69.55 E-value=6.1 Score=19.66 Aligned_cols=17 Identities=24% Similarity=0.370 Sum_probs=8.3
Q ss_pred HHHHHHHHHCCCCEEEE
Q ss_conf 99999985335868998
Q gi|254780676|r 153 EVISAIRESAPSTTIEV 169 (329)
Q Consensus 153 ~~I~~Ir~~~P~~~IEv 169 (329)
..++++|+..|+..+++
T Consensus 53 ~~i~~l~~~~~~~~~dv 69 (227)
T 1tqx_A 53 PVINNLKKYTKSIFFDV 69 (227)
T ss_dssp HHHHHHGGGCSSCEEEE
T ss_pred HHHHHHHHCCCCCCEEE
T ss_conf 99976653278876689
No 33
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=67.80 E-value=4.1 Score=20.84 Aligned_cols=165 Identities=13% Similarity=0.177 Sum_probs=83.2
Q ss_pred HHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf 99999999749823652578878767508972699986652235352234467899888823579999999970775189
Q gi|254780676|r 55 KETYNILRSRNLTTVCEEAGCPNIGECWNKNHATFMILGAICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKLSHVV 134 (329)
Q Consensus 55 ~~~~~~l~~~~L~TVCeeA~CPNi~ECw~~gtATFMilG~~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~Lk~vV 134 (329)
..+-.+|+++++ -|||.+.|+...+ .|.-+.+.++. |- -+-
T Consensus 71 ~~iLd~Lk~~~v-------------------kATFFv~g~~i~~------------------~p~~~~~~~~~-Gh-eIg 111 (247)
T 2j13_A 71 GKILDVLKEKKV-------------------PATFFVTGHYIKT------------------QKDLLLRMKDE-GH-IIG 111 (247)
T ss_dssp HHHHHHHHHHTC-------------------CEEEEECHHHHHH------------------CHHHHHHHHHT-TC-EEE
T ss_pred HHHHHHHHHCCC-------------------CEEEEEECHHHHH------------------CHHHHHHHHHC-CC-EEE
T ss_conf 999999998698-------------------3999986624566------------------99999999857-98-897
Q ss_pred EECCCCCCCCCCHHH----HHHHHHHHHHHHCCCCEEEEECCCCC-CCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf 850544534532589----99999999985335868998154623-4468999874107023320138300027563897
Q gi|254780676|r 135 ITSVDRDDLDDGGAQ----HFAEVISAIRESAPSTTIEVLTPDFL-RKPHALEKVVSAKPDVFNHNLETVASNYLMVRPG 209 (329)
Q Consensus 135 iTSV~RDDL~DgGA~----hfa~~I~~Ir~~~P~~~IEvLiPDf~-G~~~al~~v~~A~pdV~nHNiETV~rLy~~VRp~ 209 (329)
.-|.+..|+..-... .+.++.+.|++..-...+-.+-|-+. -+.+.++.+.+.|-.++.-|+.+.. ..+..+
T Consensus 112 nHt~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~~~~rpP~G~~~~~~~~~~~~~Gy~~v~ws~d~~D---w~~~~~ 188 (247)
T 2j13_A 112 NHSWSHPDFTAVNDEKLREELTSVTEEIKKVTGQKEVKYVRPPRGVFSERTLALTKEMGYYNVFWSLAFLD---WKVDEQ 188 (247)
T ss_dssp ECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHCCSCCCEECCGGGEECHHHHHHHHHTTCEEECCSEECCC---C-----
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCC---CCCCCC
T ss_conf 22145787432328999999999999999986899888777887776989999999869978747624687---876553
Q ss_pred CHHHHHHH-HHHHHHHCCCEEEECCCEEEEE---EEC-HHHHHHHHHHHHHCCCCEEECCHHCCCC
Q ss_conf 03589999-9999997089167014048876---420-6889999999996699399750222786
Q gi|254780676|r 210 ARYFHSLR-LLQRVKELDPLIFTKSGIMLGL---GET-RNEILQLMDDLRTADVDFLTMGQYLQPT 270 (329)
Q Consensus 210 a~Y~rSL~-vL~~aK~~~~~i~TKSGlMvGL---GEt-~eEi~e~l~DLr~~gvdilTiGQYL~Ps 270 (329)
.+.+...+ +++. .+.|-|+=| +++ -+-+-+.+..|++-|..++|+.++|++.
T Consensus 189 ~~~~~~~~~v~~~---------~~~G~IiLlHd~~~~t~~aL~~iI~~lk~~Gy~fvtl~ell~~~ 245 (247)
T 2j13_A 189 RGWQYAHNNVMTM---------IHPGSILLLHAISKDNAEALAKIIDDLREKGYHFKSLDDLVKSN 245 (247)
T ss_dssp ----------------------CCTTBEEEECCCSTTHHHHHHHHHHHHHHTTCEEECHHHHHHTC
T ss_pred HHHHHHHHHHHHC---------CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHCCC
T ss_conf 5799999999943---------79996899718994799999999999997899998879962579
No 34
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=66.01 E-value=7.6 Score=18.97 Aligned_cols=78 Identities=8% Similarity=0.067 Sum_probs=39.9
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE-ECCCCCC---CHHHHHHHHHC
Q ss_conf 8882357999999997077518985054453453258999999999985335868998-1546234---46899987410
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEV-LTPDFLR---KPHALEKVVSA 187 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEv-LiPDf~G---~~~al~~v~~A 187 (329)
..+.++-.+.|+.++.+|...+.++..-.--..|.+.--|.+ +|-+..+ .-|=+ -.|...| ..+.+.++.+.
T Consensus 78 ~~s~~~~i~~a~~a~~~Gad~i~v~pP~~~~~~~~~~~~~~~---~i~~~~~-~pi~lYn~p~~~g~~~~~~~l~~l~~~ 153 (294)
T 2ehh_A 78 GNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFK---TVAQEVD-IPIIIYNIPSRTCVEISVDTMFKLASE 153 (294)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHH---HHHHHCC-SCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH---HHHHHCC-CCEEEEECCCCCCCCCCHHHHHHHHHC
T ss_conf 845999999999999769999998899999989999999999---9997139-978999563104876425799999843
Q ss_pred CCHHHH
Q ss_conf 702332
Q gi|254780676|r 188 KPDVFN 193 (329)
Q Consensus 188 ~pdV~n 193 (329)
-|.|..
T Consensus 154 ~~nv~g 159 (294)
T 2ehh_A 154 CENIVA 159 (294)
T ss_dssp CTTEEE
T ss_pred CCCEEE
T ss_conf 585599
No 35
>1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1 c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A* 1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A* 1pif_A* 1bvn_P 3ij8_A* 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* ...
Probab=65.72 E-value=7.7 Score=18.94 Aligned_cols=24 Identities=4% Similarity=0.087 Sum_probs=14.4
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCE
Q ss_conf 001799866899999999749823
Q gi|254780676|r 45 RVRAPVSSGYKETYNILRSRNLTT 68 (329)
Q Consensus 45 k~~~p~~~~~~~~~~~l~~~~L~T 68 (329)
-.++.+.+.|..+-+...+.++.-
T Consensus 70 ~~r~Gt~~dfk~LV~~aH~~GI~V 93 (496)
T 1hx0_A 70 CTRSGNENEFRDMVTRCNNVGVRI 93 (496)
T ss_dssp CBTTBCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 899999999999999999879989
No 36
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid, csgid, Mg-bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} PDB: 3ieb_A*
Probab=64.28 E-value=8.2 Score=18.75 Aligned_cols=126 Identities=10% Similarity=-0.007 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHH-HCC
Q ss_conf 7999999997077518985054453453258999999999985335868998154623446899987410702332-013
Q gi|254780676|r 118 PENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFN-HNL 196 (329)
Q Consensus 118 P~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~n-HNi 196 (329)
|..++++++..|..++.+-+ .+|..+..++++.+++.+..+.|.++.. ...+....+.+.+.+.+- |--
T Consensus 72 ~~~~~~~~~~~gad~itvh~-------~~~~~~l~~~~~~~~~~g~~~~v~l~~~---~~~~~~~~~~~~~~~~~~~~~~ 141 (218)
T 3jr2_A 72 GAILSRMAFEAGADWITVSA-------AAHIATIAACKKVADELNGEIQIEIYGN---WTMQDAKAWVDLGITQAIYHRS 141 (218)
T ss_dssp HHHHHHHHHHHTCSEEEEET-------TSCHHHHHHHHHHHHHHTCEEEEECCSS---CCHHHHHHHHHTTCCEEEEECC
T ss_pred CHHHHHHHHHHCCCEEEEEC-------CCCHHHHHHHHHHHHHCCCCEEEECCCC---CCHHHHHHHHHCCCHHHHHHHH
T ss_conf 27788998874498999950-------3454789999998764188437842788---9999999988648228699972
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCC
Q ss_conf 830002756389703589999999999708916701404887642068899999999966993997502227
Q gi|254780676|r 197 ETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQ 268 (329)
Q Consensus 197 ETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~ 268 (329)
- -.......++ -..++.++..+..+.. +.+.=|-+.+ +...+.+.|+|++-+|-.+-
T Consensus 142 ~-~~~~~~~~~~----~~~l~~i~~~~~~~~~------i~v~gGi~~~----~~~~~~~~GaD~iVvGraI~ 198 (218)
T 3jr2_A 142 R-DAELAGIGWT----TDDLDKMRQLSALGIE------LSITGGIVPE----DIYLFEGIKTKTFIAGRALA 198 (218)
T ss_dssp H-HHHHHTCCSC----HHHHHHHHHHHHTTCE------EEEESSCCGG----GGGGGTTSCEEEEEESGGGS
T ss_pred H-CCCCCCCCCC----HHHHHHHHHHHCCCCC------EEECCCCCCC----CHHHHHHCCCCEEEECHHHC
T ss_conf 4-4244773668----9999999998489970------7867996825----79999984999999883660
No 37
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=64.12 E-value=8.2 Score=18.73 Aligned_cols=35 Identities=14% Similarity=0.234 Sum_probs=22.9
Q ss_pred HHCCCEEEECCCEEEEEEEC-----HHHHHHHHHHHHHCCCC
Q ss_conf 97089167014048876420-----68899999999966993
Q gi|254780676|r 223 KELDPLIFTKSGIMLGLGET-----RNEILQLMDDLRTADVD 259 (329)
Q Consensus 223 K~~~~~i~TKSGlMvGLGEt-----~eEi~e~l~DLr~~gvd 259 (329)
-++|.++. .+=+.||||- -|+++..|..+.+.+.|
T Consensus 208 l~~G~~~i--D~si~G~G~~aGN~~tE~lv~~L~~~~~~~~d 247 (320)
T 3dxi_A 208 IDDGIDFI--DATITGMGRGAGNLKMELLLTYLNKHHGLNVD 247 (320)
T ss_dssp HHTTCSEE--EEBGGGCSSTTCBCBHHHHHHHHHHHSCCCCC
T ss_pred HHHCCCEE--EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 98499889--95776405444776499999999854488989
No 38
>3mo4_A Alpha-1,3/4-fucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: TYR; 1.90A {Bifidobacterium longum subsp}
Probab=63.07 E-value=6.7 Score=19.35 Aligned_cols=51 Identities=20% Similarity=0.261 Sum_probs=30.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC---------------CC--CCHHHHHHHHHHHHHHHC
Q ss_conf 9988882357999999997077518985054453---------------45--325899999999998533
Q gi|254780676|r 109 KPQPLDPQEPENISWAVRSMKLSHVVITSVDRDD---------------LD--DGGAQHFAEVISAIRESA 162 (329)
Q Consensus 109 ~P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDD---------------L~--DgGA~hfa~~I~~Ir~~~ 162 (329)
+|...|++ .-|++.++.|.||+|+|+--.|- -| +++-....+-+++.|+..
T Consensus 60 np~~fDad---~W~~~~k~AGakY~vltaKHHDGF~lW~S~~t~~~v~~sp~~~~krDiv~el~~A~rk~G 127 (480)
T 3mo4_A 60 NPRNVDVD---QWMDALVAGGMAGVILTCKHHDGFCLWPSRLTRHTVASSPWREGKGDLVREVSESARRHG 127 (480)
T ss_dssp CCSCCCHH---HHHHHHHHTTCSEEEEEEECTTCCBSSCCTTCSCBGGGSSGGGGTCCHHHHHHHHHHHTT
T ss_pred CCCCCCHH---HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 95528999---999999985994899815727865573799999864357766888678999999998719
No 39
>3i3v_A Probable secreted solute-binding lipoprotein; transporter, PSI-II, structural genomics, protein structure initiative; 2.30A {Streptomyces coelicolor}
Probab=62.92 E-value=8.6 Score=18.59 Aligned_cols=120 Identities=18% Similarity=0.205 Sum_probs=61.2
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHC--CCHHHHHC-CCCCCCCCC--CCCCCCHHHHH---
Q ss_conf 53258999999999985335868998154623446899987410--70233201-383000275--63897035899---
Q gi|254780676|r 144 DDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSA--KPDVFNHN-LETVASNYL--MVRPGARYFHS--- 215 (329)
Q Consensus 144 ~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A--~pdV~nHN-iETV~rLy~--~VRp~a~Y~rS--- 215 (329)
...|+..|.+.|.+-.+.+|+++||+..++- ...+.+.+.+.+ .|||+.-+ ......+.. .+.+-.+|-..
T Consensus 19 ~~~~~~~~~~~v~~F~~~~p~i~V~~~~~~~-~~~~~~~~~~~~g~~pDv~~~~~~~~~~~~~~~G~l~dL~~~~~~~~~ 97 (405)
T 3i3v_A 19 TAPGSPTYLAAVDRFREENPGVKIKNLVNGD-DLAQVYETSRLARKEADVVMVNLYDKTLAWTDVGATVDVKPYLDDWGL 97 (405)
T ss_dssp SSTTHHHHHHHHHHHHHHSTTCCEEEEECST-THHHHHHHHHHTTCCCSEEEECCSTTTTTTTTTTSSCCCHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEECCCC-CHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEECCHHHHHCCH
T ss_conf 8866799999999999888294999972786-199999999976999868998483889999987992048086652421
Q ss_pred ----H-HHHHHHHHCCCE---E---EECCCEEE--------EE---EECHHHHHHHHHHHHHCCCCEEECC
Q ss_conf ----9-999999970891---6---70140488--------76---4206889999999996699399750
Q gi|254780676|r 216 ----L-RLLQRVKELDPL---I---FTKSGIML--------GL---GETRNEILQLMDDLRTADVDFLTMG 264 (329)
Q Consensus 216 ----L-~vL~~aK~~~~~---i---~TKSGlMv--------GL---GEt~eEi~e~l~DLr~~gvdilTiG 264 (329)
+ ..+......+.. + ..-.+++. |+ =+|+||++++++.|++.|+.-+.+|
T Consensus 98 ~~~~~~~~~~~~~~~dG~~y~lP~~~~~~~l~Ynkd~~~~aGi~~~P~Twde~~~~~~~l~~~g~~~~~~~ 168 (405)
T 3i3v_A 98 RGRVLPAALADWTDDEGRVRAFPYFATNWPVAYNRALLDRAGVDAIPTTGDQLIAAARKLRAKGIAPVTVG 168 (405)
T ss_dssp TTTBCHHHHHHTBCTTSCBCSBCCEEEEECEEEEHHHHHHHTCCSCCCBHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHCCHHHHHHHCCCCCEEEEEEEECCCEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 33208899997115298799997516735999980775641899999988999999999985297753145
No 40
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=60.95 E-value=9.3 Score=18.35 Aligned_cols=188 Identities=11% Similarity=0.035 Sum_probs=81.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC---HHHHHHHHHCC
Q ss_conf 888235799999999707751898505445345325899999999998533586899815462344---68999874107
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRK---PHALEKVVSAK 188 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~---~~al~~v~~A~ 188 (329)
.....|-.+.|+.++++|...+.++..--.-+.|.+.-.|. ++|-+..+--.+=--.|...|. .+.+.++.+ -
T Consensus 90 ~~s~~~~i~~a~~a~~~Gad~i~v~pP~~~~~~~~~i~~~~---~~i~~~~~~pi~lYn~P~~~g~~~~~~~~~~l~~-~ 165 (301)
T 1xky_A 90 SNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHF---KAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSE-I 165 (301)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHH---HHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHT-S
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH---HHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCC-C
T ss_conf 36699999999999975999999789978998999999999---9998518997899968763355879999998533-8
Q ss_pred CHHHHHCCCCCC-----C----CCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCC-
Q ss_conf 023320138300-----0----275638970358999999999970891670140488764206889999999996699-
Q gi|254780676|r 189 PDVFNHNLETVA-----S----NYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADV- 258 (329)
Q Consensus 189 pdV~nHNiETV~-----r----Ly~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gv- 258 (329)
|.|...--++-. + ..+.+.--...+. .++... ..| -.|.+.|++--.-++..-+.++...|-
T Consensus 166 pnvvgiK~~~~~~~~~~~~~~~~~~~~~v~~G~~~--~~~~~~-~~G-----~~G~i~~~~n~~p~~~~~~~~~~~~g~~ 237 (301)
T 1xky_A 166 ENIVAIKDAGGDVLTMTEIIEKTADDFAVYSGDDG--LTLPAM-AVG-----AKGIVSVASHVIGNEMQEMIAAFQAGEF 237 (301)
T ss_dssp TTEEEEEECSSCHHHHHHHHHHSCTTCEEEESSGG--GHHHHH-HTT-----CCEEEESTHHHHHHHHHHHHHHHHHTCH
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCC--CCCHHH-HCC-----CCCEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99899865889778999998634898699968720--144198-759-----9601117766523899999997520217
Q ss_pred C-EEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHH--HHHHHHHHH
Q ss_conf 3-9975022278610078000238469999999999749624340483001031--899999999
Q gi|254780676|r 259 D-FLTMGQYLQPTRKHHKVESFVTPQDFKSYETIAYSKGFLMVSASPLTRSSYH--AGDDFLRLK 320 (329)
Q Consensus 259 d-ilTiGQYL~Ps~~h~pV~ryv~P~eF~~~~~~a~~~Gf~~V~SgPlVRSSY~--A~e~~~~~~ 320 (329)
+ -..|-+-|.|-.+.+-..- .+ ..+|......|+. +|+ +|.-+. .++...++.
T Consensus 238 ~~a~~l~~~l~~~~~~~~~~~--~~---~~iK~~l~~~Gl~---~g~-~R~P~~~l~~~~~~~i~ 293 (301)
T 1xky_A 238 KKAQKLHQLLVRVTDSLFMAP--SP---TPVKTALQMVGLD---VGS-VRLPLLPLTEEERVTLQ 293 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTSSS--TT---HHHHHHHHHTTCC---CCC-CCTTSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCC--CH---HHHHHHHHHCCCC---CCC-CCCCCCCCCHHHHHHHH
T ss_conf 999999999999999986367--88---9999999975999---999-69899999999999999
No 41
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A*
Probab=60.06 E-value=8.4 Score=18.68 Aligned_cols=20 Identities=30% Similarity=0.182 Sum_probs=11.3
Q ss_pred HHHHHHHHHHCCCEEEEECC
Q ss_conf 99999999707751898505
Q gi|254780676|r 119 ENISWAVRSMKLSHVVITSV 138 (329)
Q Consensus 119 ~rvA~av~~l~Lk~vViTSV 138 (329)
..+++|+++-||+.-+--|.
T Consensus 155 ~el~~A~rk~Glk~G~Y~S~ 174 (455)
T 2zxd_A 155 GDLAKAVREAGLRFGVYYSG 174 (455)
T ss_dssp HHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEECC
T ss_conf 99999998669848999636
No 42
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}
Probab=59.13 E-value=8.6 Score=18.60 Aligned_cols=45 Identities=9% Similarity=0.194 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHHCCCC-EEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 068899999999966993-997502227861007800023846999999999974
Q gi|254780676|r 242 TRNEILQLMDDLRTADVD-FLTMGQYLQPTRKHHKVESFVTPQDFKSYETIAYSK 295 (329)
Q Consensus 242 t~eEi~e~l~DLr~~gvd-ilTiGQYL~Ps~~h~pV~ryv~P~eF~~~~~~a~~~ 295 (329)
+-+||++.+.|..+-|.. +|.|| |.+. ==+++++-+.++++|.-|
T Consensus 295 S~~eLi~~l~~sVsknGNLLLNVg----P~~d-----G~Ipe~d~~~L~eiG~wL 340 (443)
T 3gza_A 295 PLNTLMDKYEKSVGRNATLILGLT----PDPT-----GLIPAGDAQRLKEMGDEI 340 (443)
T ss_dssp CHHHHHHHHHTTTTBTCEEEEEEC----CCTT-----SSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCEEEEECC----CCCC-----CCCCHHHHHHHHHHHHHH
T ss_conf 999999999999677976998128----6889-----984999999999999999
No 43
>2w70_A Biotin carboxylase; ligase, inhibitor, ATP-binding, fatty acid biosynthesis, nucleotide-binding, lipid synthesis, ATP-grAsp domain; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 1dv2_A* 2gps_A 2gpw_A 3g8c_A* ...
Probab=58.94 E-value=10 Score=18.12 Aligned_cols=155 Identities=19% Similarity=0.209 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHCCCEEEE-ECCCCCC----CCCC------H--HH---HHHHHHHHHHHHCCCCEEEEECCCCCC---CH
Q ss_conf 799999999707751898-5054453----4532------5--89---999999999853358689981546234---46
Q gi|254780676|r 118 PENISWAVRSMKLSHVVI-TSVDRDD----LDDG------G--AQ---HFAEVISAIRESAPSTTIEVLTPDFLR---KP 178 (329)
Q Consensus 118 P~rvA~av~~l~Lk~vVi-TSV~RDD----L~Dg------G--A~---hfa~~I~~Ir~~~P~~~IEvLiPDf~G---~~ 178 (329)
..|+.+|.++||++-|.| +..|++- +.|. + +. -..+.|+..++.. +....|.+-+ +.
T Consensus 14 A~riira~relGi~tVav~s~~D~~s~~v~~ADe~~~i~~~~~~~sYld~~~Ii~~a~~~g----~daihpGyGflsena 89 (449)
T 2w70_A 14 ALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITG----AVAIHPGYGFLSENA 89 (449)
T ss_dssp HHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHT----CCEEECCSSTTTTCH
T ss_pred HHHHHHHHHHCCCCEEEECCHHHHCCCCHHHCCEEEECCCCCHHHHHCCHHHHHHHHHHCC----CCEEECCHHHHHHCH
T ss_conf 9999999998699399983704415889777989998489862420048999999998819----999964741654373
Q ss_pred HHHHHHHHCCCHHHHHCCCCCCCCCCC-------------CCCCCHH--HHHH-HHHHHHHHCCCEEEECC-----CEEE
Q ss_conf 899987410702332013830002756-------------3897035--8999-99999997089167014-----0488
Q gi|254780676|r 179 HALEKVVSAKPDVFNHNLETVASNYLM-------------VRPGARY--FHSL-RLLQRVKELDPLIFTKS-----GIML 237 (329)
Q Consensus 179 ~al~~v~~A~pdV~nHNiETV~rLy~~-------------VRp~a~Y--~rSL-~vL~~aK~~~~~i~TKS-----GlMv 237 (329)
+-.+.+.++|...++-+-|+.+.+=.+ +-|+... ..++ +.++.+++.|.-+..|. |--.
T Consensus 90 ~fA~~~~~~Gi~fIGPs~~~i~~~gDK~~ar~la~~~gvp~ip~~~~~~~~~~~ea~~~a~~iGyPViIKas~ggGGrGm 169 (449)
T 2w70_A 90 NFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGM 169 (449)
T ss_dssp HHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHHTCCBCSBCSSCCCSCHHHHHHHHHHHCSSEEEEETTCCTTTTC
T ss_pred HHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf 20388998899288889999987409899999999859996898766668859999999986699668852112122463
Q ss_pred EEEECHHHHHHHHHH-----HHHCCCCEEECCHHCCCCCCCCCCC
Q ss_conf 764206889999999-----9966993997502227861007800
Q gi|254780676|r 238 GLGETRNEILQLMDD-----LRTADVDFLTMGQYLQPTRKHHKVE 277 (329)
Q Consensus 238 GLGEt~eEi~e~l~D-----Lr~~gvdilTiGQYL~Ps~~h~pV~ 277 (329)
..=.+.+|+.+.++- ....|-+-+-|-|||. ..+|..|+
T Consensus 170 riv~~~~el~~~~~~~~~ea~~~f~~~~v~iE~~l~-~~rhiEvq 213 (449)
T 2w70_A 170 RVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLE-NPRHVEIQ 213 (449)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCS-SCEEEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC-CCHHHHEE
T ss_conf 898681667999999999999846998578610104-71411146
No 44
>2uvj_A TOGB, ABC type periplasmic sugar-binding protein; periplasmic binding protein, pectin degradation, trigalacturonic acid; HET: ADA; 1.8A {Yersinia enterocolitica} PDB: 2uvi_A* 2uvh_A* 2uvg_A
Probab=58.32 E-value=9.8 Score=18.19 Aligned_cols=21 Identities=14% Similarity=-0.002 Sum_probs=10.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHH
Q ss_conf 899888823579999999970
Q gi|254780676|r 108 GKPQPLDPQEPENISWAVRSM 128 (329)
Q Consensus 108 G~P~~~D~~EP~rvA~av~~l 128 (329)
|...|-..+|-..+|+.++.-
T Consensus 134 G~~~P~Twde~~~~~~~~~~~ 154 (408)
T 2uvj_A 134 GLEYPKTWDELLAAGKVFKEK 154 (408)
T ss_dssp TCCCCSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHH
T ss_conf 277434678999999999875
No 45
>3fuc_A Purine nucleoside phosphorylase; recombinant, glycosyltransferase, transferase, 9-deazaguanine, multisubstrate analogue inhibitors, nucleoside-binding; HET: 9D9 9DG; 1.45A {Bos taurus} PDB: 1b8n_A* 1b8o_A* 2ai2_A* 1v48_A* 2ai1_A* 2ai3_A* 1lvu_A* 1lv8_A* 1a9o_A 1a9p_A* 1a9s_A* 1fxu_A* 2qpl_A* 1a9t_A* 3pnp_A 1pbn_A 4pnp_A 1a9q_A* 1a9r_A* 1vfn_A* ...
Probab=58.19 E-value=10 Score=18.03 Aligned_cols=165 Identities=19% Similarity=0.183 Sum_probs=90.2
Q ss_pred CCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCC---CCCCCCCH
Q ss_conf 257887876750897269998665223535223446789988882357999999997077518985054---45345325
Q gi|254780676|r 71 EEAGCPNIGECWNKNHATFMILGAICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKLSHVVITSVD---RDDLDDGG 147 (329)
Q Consensus 71 eeA~CPNi~ECw~~gtATFMilG~~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~Lk~vViTSV~---RDDL~DgG 147 (329)
.-...|+....--.|++-=++.|.+.-+.+-|++=....-....+.+-.--+.+.+.||.+++++|+-. +.|++=
T Consensus 49 ~y~~ipgfp~~tv~gh~g~lv~G~~~g~~v~~~~gr~h~yeg~~~~~v~~~i~~~~~lGv~~ii~tnAvGsl~~~~~p-- 126 (284)
T 3fuc_A 49 DYSEIPNFPESTVPGHAGRLVFGILNGRACVMMQGRFHMYEGYPFWKVTFPVRVFRLLGVETLVVTNAAGGLNPNFEV-- 126 (284)
T ss_dssp EGGGSTTCC--------CEEEEEEETTEEEEEEESCCCGGGTCCHHHHTHHHHHHHHHTCCEEEEEEEEEECSTTCCT--
T ss_pred ECCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCC--
T ss_conf 356688999988688775399999679437886788878789987883099999998399889998465534777776--
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHH--HHHHHHHC
Q ss_conf 8999999999985335868998154623446899987410702332013830002756389703589999--99999970
Q gi|254780676|r 148 AQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETVASNYLMVRPGARYFHSLR--LLQRVKEL 225 (329)
Q Consensus 148 A~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV~rLy~~VRp~a~Y~rSL~--vL~~aK~~ 225 (329)
+. =+++.||.--. ......|-. ..|.+-..- ..+....-|+..|. +++-+++.
T Consensus 127 ----------------Gd--lv~~~d~Id~t----~~~~~~~~~-g~~~~~~~~--~~~~~~~~y~~~lr~~~~~~a~~~ 181 (284)
T 3fuc_A 127 ----------------GD--IMLIRDHINLP----GFSGENPLR-GPNEERFGV--RFPAMSDAYDRDMRQKAHSTWKQM 181 (284)
T ss_dssp ----------------TC--EEEEEEEEEHH----HHTTCCTTC-SSCCTTTCC--SSCCCTTCSCHHHHHHHHHHHHHH
T ss_pred ----------------CC--EEECCCEEECC----CCCCCCCCC-CCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf ----------------52--55136625546----767876656-887655775--345655155199999999999984
Q ss_pred CCEEEECCCEEEEEE----ECHHHHHHHHHHHHHCCCCEEECCHH
Q ss_conf 891670140488764----20688999999999669939975022
Q gi|254780676|r 226 DPLIFTKSGIMLGLG----ETRNEILQLMDDLRTADVDFLTMGQY 266 (329)
Q Consensus 226 ~~~i~TKSGlMvGLG----Et~eEi~e~l~DLr~~gvdilTiGQY 266 (329)
+.++.-++|..+.+. ||..|+ +-+|..|+|++-....
T Consensus 182 g~~~~~~~GvY~~~~GP~fET~AEi----r~~r~~GaDvVGMS~v 222 (284)
T 3fuc_A 182 GEQRELQEGTYVMLGGPNFETVAEC----RLLRNLGADAVGMSTV 222 (284)
T ss_dssp TCSSCCEEEEEEECCCSSCCCHHHH----HHHHHTTCSEEESSSH
T ss_pred CCCEECCCEEEEECCCCCCCCHHHH----HHHHHCCCCEECCCCC
T ss_conf 9942506569996558986779999----9999859998747856
No 46
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=57.97 E-value=10 Score=18.01 Aligned_cols=52 Identities=25% Similarity=0.454 Sum_probs=38.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 223535223446789988882357999999997077518985054453453258999999999985335868998
Q gi|254780676|r 95 ICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEV 169 (329)
Q Consensus 95 ~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEv 169 (329)
.|.+.|.++-+.-|.|..+. -+|+||-..-+..|.+.+.+|++.+|+..|=+
T Consensus 64 ~~l~daDiVVitaG~~~k~g-----------------------~~R~dll~~N~~i~~~i~~~i~~~~p~~iviv 115 (314)
T 1mld_A 64 DCLKGCDVVVIPAGVPRKPG-----------------------MTRDDLFNTNATIVATLTAACAQHCPDAMICI 115 (314)
T ss_dssp HHHTTCSEEEECCSCCCCTT-----------------------CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHCCCCEEEEECCCCCCCC-----------------------CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 88467988998057668999-----------------------98899988668999999987632589846999
No 47
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii ME49} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 1sov_A 1sow_A* 3czm_A*
Probab=57.96 E-value=10 Score=18.01 Aligned_cols=33 Identities=30% Similarity=0.335 Sum_probs=30.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 445345325899999999998533586899815
Q gi|254780676|r 139 DRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 139 ~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
+|+||-..-|..|.+.+.+|.+.+|+..+-+.+
T Consensus 100 sR~dll~~N~~I~~~i~~~i~~~~p~~ivlvvt 132 (331)
T 1pzg_A 100 SRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 132 (331)
T ss_dssp CGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 999999874779999999886059961999945
No 48
>3cfz_A UPF0100 protein MJ1186; ABC transporter, binding protein, molybdate, tungstate, ligand, unknown function, transport protein; 1.70A {Methanocaldococcus jannaschii}
Probab=56.11 E-value=11 Score=17.92 Aligned_cols=51 Identities=12% Similarity=0.240 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCC--CHHHH-HCCCCCCC
Q ss_conf 89999999999853358689981546234468999874107--02332-01383000
Q gi|254780676|r 148 AQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAK--PDVFN-HNLETVAS 201 (329)
Q Consensus 148 A~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~--pdV~n-HNiETV~r 201 (329)
..-|-+.|++-.+.+|+++||+-. .+..+.+++++.++ |||+. .+......
T Consensus 16 ~~~~~~~~~~Fe~~~P~I~V~~~~---~~~~~~~~kl~a~g~~pDv~~~~~~~~~~~ 69 (292)
T 3cfz_A 16 SVPFEEYEKMFEKEHPNVDVEREP---AGSVACVRKIIDLGKKADILASADYSLIPQ 69 (292)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEE---ECHHHHHHHHHTSCCCCSEEEESSTTHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEE---CCHHHHHHHHHHCCCCCCEEEECCHHHHHH
T ss_conf 899999999999888590899997---885999999996799987999998899999
No 49
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein structure initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=56.02 E-value=8.3 Score=18.72 Aligned_cols=53 Identities=17% Similarity=0.245 Sum_probs=35.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC---------------CC--CHHHHHHHHHHHHHHHCCC
Q ss_conf 99888823579999999970775189850544534---------------53--2589999999999853358
Q gi|254780676|r 109 KPQPLDPQEPENISWAVRSMKLSHVVITSVDRDDL---------------DD--GGAQHFAEVISAIRESAPS 164 (329)
Q Consensus 109 ~P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL---------------~D--gGA~hfa~~I~~Ir~~~P~ 164 (329)
+|...|+ ...|++++++|.||+|+|+--.|-. ++ ++-....+-.++.|+..-.
T Consensus 50 ~p~~fd~---~~W~~~~k~aGaky~vltakHHDGF~lw~S~~t~~~~~~s~~~g~krDlv~el~~A~rk~Glk 119 (469)
T 3eyp_A 50 NPTALDC---RQWMQTLKAAGIPAAILTAKHADGFCLWPSKYTDYSVKNAAWKNGKGDVVREFVDACEEYGLK 119 (469)
T ss_dssp CCSSCCH---HHHHHHHHHTTCCEEEEEEECTTCCBSSCCTTCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCE
T ss_pred CCCCCCH---HHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCE
T ss_conf 9320899---999999998699689965210575667789999876545787788644999999999861973
No 50
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=55.87 E-value=11 Score=17.77 Aligned_cols=154 Identities=14% Similarity=0.182 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHCCCEEEEEC-CCCCC----CCCC-----HH------HHHHHHHHHHHHHCCCCEEEEECCCCCC---CH
Q ss_conf 79999999970775189850-54453----4532-----58------9999999999853358689981546234---46
Q gi|254780676|r 118 PENISWAVRSMKLSHVVITS-VDRDD----LDDG-----GA------QHFAEVISAIRESAPSTTIEVLTPDFLR---KP 178 (329)
Q Consensus 118 P~rvA~av~~l~Lk~vViTS-V~RDD----L~Dg-----GA------~hfa~~I~~Ir~~~P~~~IEvLiPDf~G---~~ 178 (329)
-.|+.+|.++||++.|.|-| .|++- +.|. ++ --..+.++.+++..++ .+.|.+.+ +.
T Consensus 13 A~riira~relGi~tVaV~s~~D~~a~~~~~ADe~~~i~~~~~~~syLd~~~Ii~ia~~~~~D----aIhPGyGflsEn~ 88 (451)
T 2vpq_A 13 AVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYLNIPNILSIATSTGCD----GVHPGYGFLAENA 88 (451)
T ss_dssp HHHHHHHHHHTTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHTTCS----EEECCSSTTTTCH
T ss_pred HHHHHHHHHHCCCEEEEECCCHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCC----EEEECHHHHCCCH
T ss_conf 999999999879959998483674688977889999818986423436899999999997829----9995866634466
Q ss_pred HHHHHHHHCCCHHHHHCCCCCCCCCCC-------------CCCCC-HHHHHH-HHHHHHHHCCCEEEECCCE-----EEE
Q ss_conf 899987410702332013830002756-------------38970-358999-9999999708916701404-----887
Q gi|254780676|r 179 HALEKVVSAKPDVFNHNLETVASNYLM-------------VRPGA-RYFHSL-RLLQRVKELDPLIFTKSGI-----MLG 238 (329)
Q Consensus 179 ~al~~v~~A~pdV~nHNiETV~rLy~~-------------VRp~a-~Y~rSL-~vL~~aK~~~~~i~TKSGl-----MvG 238 (329)
+....+.+++...++-+-++....-.+ |-|+. ..-.++ +.++.+++.|.-+..|... =+.
T Consensus 89 ~fa~~~~~~gi~fIGPs~~~i~~~gdK~~ar~~a~~~gvPv~pg~~~~~~~~~ea~~~a~~IGyPviIKas~ggGGrGmr 168 (451)
T 2vpq_A 89 DFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATAGGGGKGIR 168 (451)
T ss_dssp HHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHHHCSSEEEEETTCCTTCSEE
T ss_pred HHHHHHHHCCCEECCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCE
T ss_conf 77899997598460797999998648689999999869991899777779999999999873996999988789988626
Q ss_pred EEECHHHHHHHHHHHH-----HCCCCEEECCHHCCCCCCCCCC
Q ss_conf 6420688999999999-----6699399750222786100780
Q gi|254780676|r 239 LGETRNEILQLMDDLR-----TADVDFLTMGQYLQPTRKHHKV 276 (329)
Q Consensus 239 LGEt~eEi~e~l~DLr-----~~gvdilTiGQYL~Ps~~h~pV 276 (329)
+=++.+|+.+.+...+ ..|-+-+-|-+|+.- .+|+.|
T Consensus 169 iV~~~~el~~a~~~a~~ea~~~f~~~~v~iE~~i~~-~rhiEv 210 (451)
T 2vpq_A 169 VARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIEN-FRHIEI 210 (451)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCCS-EEEEEE
T ss_pred EECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC-CEEEEE
T ss_conf 875824569999999999985479983899973599-779999
No 51
>1izc_A Macrophomate synthase intermolecular diels- alderase; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=55.77 E-value=11 Score=17.76 Aligned_cols=155 Identities=14% Similarity=0.168 Sum_probs=86.7
Q ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCC--HHHHHHHHHHHHHHHC-CCCEEEEECCCCCCCHHHHHHHHHCCCH-HHHHC
Q ss_conf 999999970775189850544534532--5899999999998533-5868998154623446899987410702-33201
Q gi|254780676|r 120 NISWAVRSMKLSHVVITSVDRDDLDDG--GAQHFAEVISAIRESA-PSTTIEVLTPDFLRKPHALEKVVSAKPD-VFNHN 195 (329)
Q Consensus 120 rvA~av~~l~Lk~vViTSV~RDDL~Dg--GA~hfa~~I~~Ir~~~-P~~~IEvLiPDf~G~~~al~~v~~A~pd-V~nHN 195 (329)
.+|+.+...|..||+| |+.+| +-......|++++... ..+..=|-+|+ .+...+++++|+|.+ |+-=.
T Consensus 54 ~~ae~~a~~G~D~v~i------D~EHg~~~~~~l~~~i~a~~~~~~~~~~~iVRvp~--~~~~~i~~~LD~Ga~GIivP~ 125 (339)
T 1izc_A 54 FVTKVLAATKPDFVWI------DVEHGMFNRLELHDAIHAAQHHSEGRSLVIVRVPK--HDEVSLSTALDAGAAGIVIPH 125 (339)
T ss_dssp HHHHHHHHTCCSEEEE------ETTTSCCCHHHHHHHHHHHHHHTTTCSEEEEECCT--TCHHHHHHHHHHTCSEEEETT
T ss_pred HHHHHHHCCCCCEEEE------CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCC--CCHHHHHHHHHCCCCEEEECC
T ss_conf 9999997699899998------57889999999999999999847899861884898--887999999717999899778
Q ss_pred CCCCCCCCCCCC----------------------CCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHH
Q ss_conf 383000275638----------------------9703589999999999708916701404887642068899999999
Q gi|254780676|r 196 LETVASNYLMVR----------------------PGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDL 253 (329)
Q Consensus 196 iETV~rLy~~VR----------------------p~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DL 253 (329)
+||++..-..|+ +...|...-+ |.+..+.+++ .+-+=||.+= ++-++++
T Consensus 126 V~s~eeA~~~V~a~rypP~G~Rg~~~~~~~~g~~~~~~~~~~~~---y~~~~n~~~~-----vi~qIEt~~a-v~nldeI 196 (339)
T 1izc_A 126 VETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPY---NVATSNNHVC-----IIPQIESVKG-VENVDAI 196 (339)
T ss_dssp CCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTT---CHHHHHHHCE-----EEEEECSHHH-HHTHHHH
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHH---HHHHHHHHCC-----EEECCCCHHH-HHHHHHH
T ss_conf 69999999999974028888867676533344331111276467---8998754133-----3000377899-9989998
Q ss_pred HHC-CCCEEECCHH-CCCCCCC---CCCCCCCCHHHHHHHHHH
Q ss_conf 966-9939975022-2786100---780002384699999999
Q gi|254780676|r 254 RTA-DVDFLTMGQY-LQPTRKH---HKVESFVTPQDFKSYETI 291 (329)
Q Consensus 254 r~~-gvdilTiGQY-L~Ps~~h---~pV~ryv~P~eF~~~~~~ 291 (329)
.++ |||.+-||-| |.=|... .....+-+|+-.+.++++
T Consensus 197 ~av~GVD~i~iGp~DLs~slG~p~~~~~g~~~~p~v~~Ai~~i 239 (339)
T 1izc_A 197 AAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKF 239 (339)
T ss_dssp HTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHH
T ss_pred HCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 6326875699770688985699866657888998999999999
No 52
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=55.62 E-value=11 Score=17.75 Aligned_cols=55 Identities=20% Similarity=0.182 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHH---------------HHHHHHHHHHCCCCEE
Q ss_conf 882357999999997077518985054453453258999---------------9999999853358689
Q gi|254780676|r 113 LDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHF---------------AEVISAIRESAPSTTI 167 (329)
Q Consensus 113 ~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hf---------------a~~I~~Ir~~~P~~~I 167 (329)
+|.+.-.+++++...-|...+=|--.-.|-+.||---+- -+.++++|+..+.+-+
T Consensus 28 P~~~~~~~~l~~l~~~GaD~iEiGiPfSDP~aDGpvIq~a~~~al~~g~~~~~~~~~~~~~r~~~~~~pl 97 (268)
T 1qop_A 28 PGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPI 97 (268)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCE
T ss_conf 9879999999999977999999789888865447999999999997898679987678876531788778
No 53
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=54.70 E-value=12 Score=17.65 Aligned_cols=80 Identities=11% Similarity=0.084 Sum_probs=45.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE-ECCCCCCC---HHHHHHHHHC
Q ss_conf 8882357999999997077518985054453453258999999999985335868998-15462344---6899987410
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEV-LTPDFLRK---PHALEKVVSA 187 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEv-LiPDf~G~---~~al~~v~~A 187 (329)
..+..|-.+.|+.++++|...+++...--.-+.|.+.-.|.+.| -+.. +.-|-+ -.|...|. .+.+.++.+.
T Consensus 78 ~~s~~~ai~~a~~a~~~Gad~v~v~~P~~~~~~~~~i~~~~~~i---a~~~-~~pi~iy~~p~~~~~~~~~~~~~~l~~~ 153 (289)
T 2yxg_A 78 SNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKV---AESI-NLPIVLYNVPSRTAVNLEPKTVKLLAEE 153 (289)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHH---HHHC-SSCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHH---HHCC-CCCEEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 74599999999999977999999889878899999999999999---9647-9988999788634541157889999861
Q ss_pred CCHHHHHC
Q ss_conf 70233201
Q gi|254780676|r 188 KPDVFNHN 195 (329)
Q Consensus 188 ~pdV~nHN 195 (329)
-|.+....
T Consensus 154 ~p~v~giK 161 (289)
T 2yxg_A 154 YSNISAVK 161 (289)
T ss_dssp CTTEEEEE
T ss_pred CCCCEEEE
T ss_conf 43642786
No 54
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=54.33 E-value=12 Score=17.61 Aligned_cols=192 Identities=12% Similarity=0.095 Sum_probs=101.8
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC-HH------HHHHHHHHHHHHHCCCCEEEE---ECCCC---------
Q ss_conf 823579999999970775189850544534532-58------999999999985335868998---15462---------
Q gi|254780676|r 114 DPQEPENISWAVRSMKLSHVVITSVDRDDLDDG-GA------QHFAEVISAIRESAPSTTIEV---LTPDF--------- 174 (329)
Q Consensus 114 D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~Dg-GA------~hfa~~I~~Ir~~~P~~~IEv---LiPDf--------- 174 (329)
..++-.+..+-...+|++.+.|=-|--++++|. |+ +...+.|+.||+..|+..|=+ |.|=-
T Consensus 64 Sid~L~~eie~~~~lGI~aV~LFgvi~~~~Kd~~gs~A~n~~~lv~raIr~iK~~fp~l~vi~DVcLc~YT~hGHcGil~ 143 (337)
T 1w5q_A 64 SIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCEFTTHGQCGILD 143 (337)
T ss_dssp EHHHHHHHHHHHHHTTCCEEEEEECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBTTCCSSCBC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf 89999999999998799789980411466678885010696328999999999860646999752035677867766226
Q ss_pred -CC---CHHHHHHH-------HHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-----------------
Q ss_conf -34---46899987-------410702332013830002756389703589999999999708-----------------
Q gi|254780676|r 175 -LR---KPHALEKV-------VSAKPDVFNHNLETVASNYLMVRPGARYFHSLRLLQRVKELD----------------- 226 (329)
Q Consensus 175 -~G---~~~al~~v-------~~A~pdV~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~----------------- 226 (329)
.| |...|+.+ .+||.|+++ |-.--+-+...++.+-+..
T Consensus 144 ~~g~idND~Tl~~L~~~Al~~A~AGaDivA--------------PSdMMDGrV~aIR~~Ld~~g~~~~~ImSYsaKfaS~ 209 (337)
T 1w5q_A 144 DDGYVLNDVSIDVLVRQALSHAEAGAQVVA--------------PSDMMDGRIGAIREALESAGHTNVRVMAYSAKYASA 209 (337)
T ss_dssp TTSCBCHHHHHHHHHHHHHHHHHTTCSEEE--------------ECSCCTTHHHHHHHHHHHTTCTTCEEEEEEEEBCCG
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCEEC--------------CHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 888665689999999999999981798044--------------131146689999999997699776201235666463
Q ss_pred ------------CEE--EECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECC---HHCC---C--CCCCCCCCCCCCHHH
Q ss_conf ------------916--70140488764206889999999996699399750---2227---8--610078000238469
Q gi|254780676|r 227 ------------PLI--FTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMG---QYLQ---P--TRKHHKVESFVTPQD 284 (329)
Q Consensus 227 ------------~~i--~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiG---QYL~---P--s~~h~pV~ryv~P~e 284 (329)
|.+ --|++--+--+-..|-+.++..|+.+ |-|+|-+- -||- . ..-.+||.-|---.|
T Consensus 210 fYGPFRdA~~S~p~~~~gdr~~YQmd~~n~~eAl~e~~~D~~E-GAD~lMVKPa~~yLDii~~~k~~~~~Pv~aYqVSGE 288 (337)
T 1w5q_A 210 YYGPFRDAVGSASNLGKGNRATYQMDPANSDEALHEVAADLAE-GADMVMVKPGMPYLDIVRRVKDEFRAPTFVYQVSGE 288 (337)
T ss_dssp GGHHHHHC----------CGGGTSBCTTCSHHHHHHHHHHHHT-TCSEEEEESCGGGHHHHHHHHHHHCSCEEEEECHHH
T ss_pred CCCHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC-CCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHH
T ss_conf 1135788742765557888226636998989999999851753-987799626515899999999726998799976199
Q ss_pred HHHHHHHHHHCCCCEE-----------ECCCCCCCCHHHHHHHHHHHH
Q ss_conf 9999999997496243-----------404830010318999999999
Q gi|254780676|r 285 FKSYETIAYSKGFLMV-----------SASPLTRSSYHAGDDFLRLKN 321 (329)
Q Consensus 285 F~~~~~~a~~~Gf~~V-----------~SgPlVRSSY~A~e~~~~~~~ 321 (329)
|..++.-+ +.|+..- -+|-=.=-||+|.+....+.+
T Consensus 289 Yamik~a~-~~g~~~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~~ 335 (337)
T 1w5q_A 289 YAMHMGAI-QNGWLAESVILESLTAFKRAGADGILTYFAKQAAEQLRR 335 (337)
T ss_dssp HHHHHHHH-HTTSSCTTHHHHHHHHHHHHTCSEEEETTHHHHHHHHHC
T ss_pred HHHHHHHH-HCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHC
T ss_conf 99999999-869950759999999998659989987009999999856
No 55
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=54.09 E-value=12 Score=17.58 Aligned_cols=24 Identities=21% Similarity=0.239 Sum_probs=14.6
Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 179986689999999974982365
Q gi|254780676|r 47 RAPVSSGYKETYNILRSRNLTTVC 70 (329)
Q Consensus 47 ~~p~~~~~~~~~~~l~~~~L~TVC 70 (329)
++.+-+++.++-+.+.+.++.-|=
T Consensus 74 ~~Gt~~df~~LV~~~H~~GI~Vil 97 (483)
T 3bh4_A 74 KYGTKSELQDAIGSLHSRNVQVYG 97 (483)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 899999999999999988998999
No 56
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=53.26 E-value=12 Score=17.49 Aligned_cols=85 Identities=20% Similarity=0.340 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHH-HCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHCCCE
Q ss_conf 9999999985335868998154623446899987410702332-01383000275638970358999999-999970891
Q gi|254780676|r 151 FAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFN-HNLETVASNYLMVRPGARYFHSLRLL-QRVKELDPL 228 (329)
Q Consensus 151 fa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~n-HNiETV~rLy~~VRp~a~Y~rSL~vL-~~aK~~~~~ 228 (329)
+.+.+.++|+..|+..|||-+.++ +.++..+++++|++= -|+.. +-+ +.++..+++
T Consensus 195 ~~~~i~~~~~~~~~~~I~VEv~~~----~~~~~a~~~g~D~I~lDn~~~------------------~~l~~~V~~~~~~ 252 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEVEVENL----DELDDALKAGADIIMLDNFNT------------------DQMREAVKRVNGQ 252 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEEEESSH----HHHHHHHHTTCSEEEESSCCH------------------HHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHCCCCEEEEECHHH----HHHHHHHHCCCCEEEECCCCH------------------HHHHHHHHHHCCC
T ss_conf 778899999738875499833278----877777736997998648999------------------9999999985796
Q ss_pred EEE-CCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHH
Q ss_conf 670-14048876420688999999999669939975022
Q gi|254780676|r 229 IFT-KSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQY 266 (329)
Q Consensus 229 i~T-KSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQY 266 (329)
+.. =||.| + .+.+.++.+.|||++.+|-.
T Consensus 253 v~ieaSGGI-----~----~~ni~~ya~~GVD~Is~g~l 282 (296)
T 1qap_A 253 ARLEVSGNV-----T----AETLREFAETGVDFISVGAL 282 (296)
T ss_dssp CCEEECCCS-----C----HHHHHHHHHTTCSEEECSHH
T ss_pred EEEEEECCC-----C----HHHHHHHHHCCCCEEECCHH
T ss_conf 799997999-----9----99999999769899982855
No 57
>3k6v_A Solute-binding protein MA_0280; MODA, molybdate, periplasmic binding protein, ABC transporter, transport protein, ligand; HET: CIT; 1.69A {Methanosarcina acetivorans} PDB: 3k6u_A* 3k6w_A 3k6x_A
Probab=52.85 E-value=13 Score=17.45 Aligned_cols=49 Identities=12% Similarity=0.251 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCC--CHHHHH-CCCCC
Q ss_conf 89999999999853358689981546234468999874107--023320-13830
Q gi|254780676|r 148 AQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAK--PDVFNH-NLETV 199 (329)
Q Consensus 148 A~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~--pdV~nH-NiETV 199 (329)
..-|.+.|++-.+.+|+++|++- +.|..+.+++++.++ ||||.- +....
T Consensus 54 ~~~~~~l~~~Fek~~P~IkV~~~---~~~~~~~~~~~~~~g~~pDV~~~~~~~~~ 105 (354)
T 3k6v_A 54 SVPFEELEAEFEAQHPGVDVQRE---AAGSAQSVRKITELGKKADVLASADYALI 105 (354)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEE---EECHHHHHHHHHTSCCCCSEEEESSTTHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEE---ECCCHHHHHHHHHCCCCCCEEEECCHHHH
T ss_conf 89999999999998849289999---68819999999967999878998888999
No 58
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=52.21 E-value=13 Score=17.38 Aligned_cols=118 Identities=14% Similarity=0.119 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHCC-CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCC
Q ss_conf 7999999997077-518985054453453258999999999985335868998154623446899987410702332013
Q gi|254780676|r 118 PENISWAVRSMKL-SHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNL 196 (329)
Q Consensus 118 P~rvA~av~~l~L-k~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNi 196 (329)
...+++.+.+.++ .++++.|-+- +.++.+|+.+|+..+-.++.. .+.+......+... ++.+
T Consensus 144 ~~~~~~~i~~~~~~~~v~i~Sf~~------------~~l~~l~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~ 206 (292)
T 3mz2_A 144 MERTAQLITDMQAEPYVMITVHDG------------ASARFFYEKNPNFMFEAFVKT----KEAVQDYEDNGIPW-SHIM 206 (292)
T ss_dssp HHHHHHHHHHTTCTTTEEEEESSH------------HHHHHHHHHCTTCCEEEECCS----HHHHHHHHHTTCCG-GGEE
T ss_pred HHHHHHHHHHCCCCCEEEEEECCH------------HHHHHHHHHCCCCEEEEEECC----HHHHHHHHHHCCCH-HHHH
T ss_conf 889999999708761399997999------------999999986999569998354----25667888707716-5544
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEC-----HHHHHHHHHHHHHCCCCEEECCH
Q ss_conf 8300027563897035899999999997089167014048876420-----68899999999966993997502
Q gi|254780676|r 197 ETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGET-----RNEILQLMDDLRTADVDFLTMGQ 265 (329)
Q Consensus 197 ETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt-----~eEi~e~l~DLr~~gvdilTiGQ 265 (329)
. .+-+. ....+-++++.+++.|..+.+-+ ++.. .++-.+.++.|.+.|||.++--.
T Consensus 207 ~-------~~~~~-~~~~~~~~v~~~~~~G~~v~~wT-----vn~~~~~~~~~~~~~~~~~l~~lGVdgI~TD~ 267 (292)
T 3mz2_A 207 A-------YVGPK-ITPEVREVIDMLHERGVMCMIST-----APSDDKLSTPESRAEAYRMIIRQGVDIIESDR 267 (292)
T ss_dssp E-------EEESS-CCHHHHHHHHHHHHTTBCEEEEC-----TTTGGGSSSHHHHHHHHHHHHHTTCCEEEESC
T ss_pred H-------HCCCC-CCCCCHHHHHHHHHCCCEEEEEC-----CCCHHHHHHCCCCHHHHHHHHHCCCCEEEECC
T ss_conf 3-------31665-43057999999998799899988-----78667632113879999999976999999698
No 59
>3cfx_A UPF0100 protein MA_0280; ABC transporter, binding protein, molybdate, tungstate, ligand, unknown function, transport protein; 1.60A {Methanosarcina acetivorans}
Probab=51.96 E-value=13 Score=17.35 Aligned_cols=46 Identities=15% Similarity=0.259 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHC--CCHHHHHCC
Q ss_conf 8999999999985335868998154623446899987410--702332013
Q gi|254780676|r 148 AQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSA--KPDVFNHNL 196 (329)
Q Consensus 148 A~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A--~pdV~nHNi 196 (329)
..-|.+.|++-.+.+|+++||+-. .+..+.+++++.+ .|||+.-+.
T Consensus 16 ~~~~~~l~~~Fe~~~P~i~V~~~~---~~~~~~~~~~~a~g~~pDv~~~~~ 63 (296)
T 3cfx_A 16 SVPFEELEAEFEAQHPGVDVQREA---AGSAQSVRKITELGKKADVLASAD 63 (296)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEEE---CCHHHHHHHHHTSCCCCSEEEESS
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEE---CCHHHHHHHHHHCCCCCCEEEECC
T ss_conf 999999999999888393899996---881999999996799999999863
No 60
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein structure initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: d.58.18.11 d.58.18.11
Probab=51.42 E-value=13 Score=17.29 Aligned_cols=81 Identities=11% Similarity=0.118 Sum_probs=56.1
Q ss_pred HHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 99708916701404887642068899999999966993997502227861007800023846999999999974962434
Q gi|254780676|r 222 VKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQPTRKHHKVESFVTPQDFKSYETIAYSKGFLMVS 301 (329)
Q Consensus 222 aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~Ps~~h~pV~ryv~P~eF~~~~~~a~~~Gf~~V~ 301 (329)
.++.+..+..-+=+-+||-.+..-.-+.+.-|.++|++|--+-|. ...-.+.-.+..+.++.-.+.-.+-||+.+.
T Consensus 62 l~~~~~~~~~~~vvg~~m~~~~G~~a~i~~~L~~~~INI~~i~~~----~s~~~~~~vi~~~D~~~a~~~L~~~~f~~~~ 137 (144)
T 2f06_A 62 LKDNHFAVNITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSF----ANNNVANVVIRPSNMDKCIEVLKEKKVDLLA 137 (144)
T ss_dssp HHHTTCCEEEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEE----EETTEEEEEEEESCHHHHHHHHHHTTCEEEC
T ss_pred HHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEE----CCCCCEEEEEECCCHHHHHHHHHHCCCEECC
T ss_conf 440476255898772476678508999999998689987987523----3778369999736599999999984996847
Q ss_pred CCCCC
Q ss_conf 04830
Q gi|254780676|r 302 ASPLT 306 (329)
Q Consensus 302 SgPlV 306 (329)
++-|.
T Consensus 138 ~~dl~ 142 (144)
T 2f06_A 138 ASDLY 142 (144)
T ss_dssp HHHHT
T ss_pred HHHHH
T ss_conf 89830
No 61
>1v93_A 5,10-methylenetetrahydrofolate reductase; flavoprotein, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 1.90A {Thermus thermophilus HB8} SCOP: c.1.23.1
Probab=50.31 E-value=14 Score=17.18 Aligned_cols=24 Identities=13% Similarity=0.175 Sum_probs=10.3
Q ss_pred EEEEEECHHHHHHHHHHHHHCCCC
Q ss_conf 887642068899999999966993
Q gi|254780676|r 236 MLGLGETRNEILQLMDDLRTADVD 259 (329)
Q Consensus 236 MvGLGEt~eEi~e~l~DLr~~gvd 259 (329)
+-=+.=..+-+.+-++.+++.|++
T Consensus 178 iTQ~~fd~~~~~~~~~~~r~~gi~ 201 (296)
T 1v93_A 178 ITQLFFNNAHYFGFLERARRAGIG 201 (296)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCC
T ss_pred EEEEEECHHHHHHHHHHHHHCCCC
T ss_conf 621166289999999999975999
No 62
>3noe_A DAP-A, dihydrodipicolinate synthase; Lys biosynthesis pathway, lyase; 2.95A {Pseudomonas aeruginosa}
Probab=49.84 E-value=14 Score=17.13 Aligned_cols=77 Identities=14% Similarity=0.169 Sum_probs=40.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCC---CHHHHHHHHHCC
Q ss_conf 88823579999999970775189850544534532589999999999853358689981546234---468999874107
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLR---KPHALEKVVSAK 188 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G---~~~al~~v~~A~ 188 (329)
..+..|-.+.|+.++.+|...+.+...-.--+.+.+.-.|.+. |-+..+--.+=--.|...| ..+.++++.+ -
T Consensus 79 ~~s~~~~i~~a~~a~~~Gad~v~v~~P~~~~~~~~~i~~~~~~---ia~~~~~pi~~Y~~p~~~g~~~~~~~~~~l~~-~ 154 (292)
T 3noe_A 79 ANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRH---IAEAVAIPQILYNVPGRTSCDMLPETVERLSK-V 154 (292)
T ss_dssp CSSHHHHHHHHHHHHTTTCSEEEEECCCSSCCCHHHHHHHHHH---HHHHSCSCEEEEECHHHHSCCCCHHHHHHHHT-S
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHH---HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHC-C
T ss_conf 7559999999999998499999988998899899999999999---99747998899979864477899999999847-9
Q ss_pred CHHH
Q ss_conf 0233
Q gi|254780676|r 189 PDVF 192 (329)
Q Consensus 189 pdV~ 192 (329)
|.|.
T Consensus 155 pni~ 158 (292)
T 3noe_A 155 PNII 158 (292)
T ss_dssp TTEE
T ss_pred CCEE
T ss_conf 9989
No 63
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A substrate tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=48.25 E-value=15 Score=16.96 Aligned_cols=83 Identities=10% Similarity=0.031 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCCC--CCCCCCHHHHHHHHHHHHHHHCCCCEEEE--EC---CCCCC----CHHHH
Q ss_conf 8823579999999970775189850544--53453258999999999985335868998--15---46234----46899
Q gi|254780676|r 113 LDPQEPENISWAVRSMKLSHVVITSVDR--DDLDDGGAQHFAEVISAIRESAPSTTIEV--LT---PDFLR----KPHAL 181 (329)
Q Consensus 113 ~D~~EP~rvA~av~~l~Lk~vViTSV~R--DDL~DgGA~hfa~~I~~Ir~~~P~~~IEv--Li---PDf~G----~~~al 181 (329)
-|...|..+|+.-..-|..-.++--++. +.+.. -..+.+.|+.|-+.. .+-+.+ =| -|..+ ..+..
T Consensus 277 r~~GdPv~~a~~y~~~GaDEl~~lDi~as~~~~~~--~~~~~~~i~~ia~~~-~iPltvGGGIrsi~die~~~~~~~e~A 353 (555)
T 1jvn_A 277 RNLGKPVQLAQKYYQQGADEVTFLNITSFRDCPLK--DTPMLEVLKQAAKTV-FVPLTVGGGIKDIVDVDGTKIPALEVA 353 (555)
T ss_dssp --CHHHHHHHHHHHHTTCSEEEEEEEC---CCCGG--GCHHHHHHHHHTTTC-CSCEEEESSCSCEECTTCCEECHHHHH
T ss_pred EECCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCC--CCCHHHHHHHHHHHC-CCCEEEECCCCCHHHHCCCCCCHHHHH
T ss_conf 07779999999999869999999988746778667--740899999998646-887898477156467331011027999
Q ss_pred HHHHHCCCHHHHHCCCC
Q ss_conf 98741070233201383
Q gi|254780676|r 182 EKVVSAKPDVFNHNLET 198 (329)
Q Consensus 182 ~~v~~A~pdV~nHNiET 198 (329)
+.++.+|.|.+.=|-..
T Consensus 354 ~~ll~~GadKV~inS~A 370 (555)
T 1jvn_A 354 SLYFRSGADKVSIGTDA 370 (555)
T ss_dssp HHHHHHTCSEEEECHHH
T ss_pred HHHHHCCCCEEEECHHH
T ss_conf 99997799879988378
No 64
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=47.83 E-value=15 Score=16.92 Aligned_cols=42 Identities=14% Similarity=0.120 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 823579999999970775189850544534532589999999
Q gi|254780676|r 114 DPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVI 155 (329)
Q Consensus 114 D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I 155 (329)
...|-.+.|+.++.+|...++++..----..|.+.-.|.+.|
T Consensus 91 st~~~i~~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~f~~i 132 (314)
T 3d0c_A 91 SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNI 132 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 889999999999972988442058855677679999999999
No 65
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=47.79 E-value=13 Score=17.29 Aligned_cols=52 Identities=15% Similarity=0.243 Sum_probs=26.4
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC------------CCCCHH--HHHHHHHHHHHHHCCC
Q ss_conf 988882357999999997077518985054453------------453258--9999999999853358
Q gi|254780676|r 110 PQPLDPQEPENISWAVRSMKLSHVVITSVDRDD------------LDDGGA--QHFAEVISAIRESAPS 164 (329)
Q Consensus 110 P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDD------------L~DgGA--~hfa~~I~~Ir~~~P~ 164 (329)
|...|+ ...|++.+..|.||+|+|+.-.|- ..+.|. ....+...+.|+....
T Consensus 75 p~~fd~---~~W~~l~k~aGakY~v~takHHDGF~lwdS~~t~~n~~~~~~krDiv~el~~A~r~~Glk 140 (450)
T 2wvv_A 75 PTKFDA---KKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGID 140 (450)
T ss_dssp CTTCCH---HHHHHHHHHHTCSEEEEEEECTTCCBSSCCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCE
T ss_pred CCCCCH---HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 665999---999999998599679976773377534468899973336887777089999999843874
No 66
>1vkf_A Glycerol uptake operon antiterminator-related protein; TM1436, structural genomics, JCSG, PSI, protein structure initiative; HET: CIT; 1.65A {Thermotoga maritima MSB8} SCOP: c.1.29.1
Probab=47.65 E-value=14 Score=17.08 Aligned_cols=104 Identities=10% Similarity=0.143 Sum_probs=56.6
Q ss_pred CCHHHHHHHHHHHHHHHCCCCEEEE-ECCCCCCCHHHHHHHHHCCCHH--------H----HHCCCCCCCCCCCCCCCCH
Q ss_conf 3258999999999985335868998-1546234468999874107023--------3----2013830002756389703
Q gi|254780676|r 145 DGGAQHFAEVISAIRESAPSTTIEV-LTPDFLRKPHALEKVVSAKPDV--------F----NHNLETVASNYLMVRPGAR 211 (329)
Q Consensus 145 DgGA~hfa~~I~~Ir~~~P~~~IEv-LiPDf~G~~~al~~v~~A~pdV--------~----nHNiETV~rLy~~VRp~a~ 211 (329)
.|--....+.++.+++.+..+-|-+ |+..+..++.+++-+.+.+||- + ..++-|+-|+| +-....
T Consensus 39 ~g~I~~L~~iv~~~k~~gK~vfVHiDLI~GL~~D~~avefLk~~~~dGIISTk~~~I~~Ak~~Gl~tIqRvF--liDS~a 116 (188)
T 1vkf_A 39 KSDILNLKFHLKILKDRGKTVFVDMDFVNGLGEGEEAILFVKKAGADGIITIKPKNYVVAKKNGIPAVLRFF--ALDSKA 116 (188)
T ss_dssp CEETTTHHHHHHHHHHTTCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEESCHHHHHHHHHTTCCEEEEEE--CCSHHH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEEEE--EEEHHH
T ss_conf 594889999999999869989998631778789879999999769999996889999999986996999987--764678
Q ss_pred HHHHHHHHHHHHHCCCEEE------------ECCCEEE-EEEECHHHHHHHH
Q ss_conf 5899999999997089167------------0140488-7642068899999
Q gi|254780676|r 212 YFHSLRLLQRVKELDPLIF------------TKSGIML-GLGETRNEILQLM 250 (329)
Q Consensus 212 Y~rSL~vL~~aK~~~~~i~------------TKSGlMv-GLGEt~eEi~e~l 250 (329)
|+++++.++..+--.-.+. ++.-++. ||=+|.|||.+++
T Consensus 117 l~~~~~~i~~~~PD~IEiLPG~i~p~ii~~~~~~piIAGGLI~~~edV~~aL 168 (188)
T 1vkf_A 117 VERGIEQIETLGVDVVEVLPGAVAPKVARKIPGRTVIAAGLVETEEEAREIL 168 (188)
T ss_dssp HHHHHHHHHHHTCSEEEEESGGGHHHHHTTSTTSEEEEESCCCSHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
T ss_conf 9999999865699999987503179999854698099615728899999998
No 67
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek KEY, C-terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=47.40 E-value=15 Score=16.87 Aligned_cols=17 Identities=12% Similarity=0.063 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHCCCC
Q ss_conf 99999999998533586
Q gi|254780676|r 149 QHFAEVISAIRESAPST 165 (329)
Q Consensus 149 ~hfa~~I~~Ir~~~P~~ 165 (329)
..+....+.+++..|+.
T Consensus 152 ~~~~~~~~~~~~~~~d~ 168 (424)
T 2dh2_A 152 SFLAEWQNITKGFSEDR 168 (424)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHCCCC
T ss_conf 78999999887208873
No 68
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=47.33 E-value=15 Score=16.87 Aligned_cols=77 Identities=14% Similarity=0.110 Sum_probs=48.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC---HHHHHHHHHCC
Q ss_conf 888235799999999707751898505445345325899999999998533586899815462344---68999874107
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRK---PHALEKVVSAK 188 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~---~~al~~v~~A~ 188 (329)
..+..|-.+.|+.++.+|...+.++..----+.|.+.-.|.+.| -+..+--.+=--.|++.|. .+.+.++++..
T Consensus 78 ~~s~~~~i~~a~~a~~~Gad~v~v~pP~~~~~s~~~l~~~~~~v---~~~~~~pi~~Yn~P~~~~~~~~~~~l~~l~~~~ 154 (292)
T 2vc6_A 78 SNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAI---DAASTIPIIVYNIPGRSAIEIHVETLARIFEDC 154 (292)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHH---HHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHH---HHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCC
T ss_conf 43799999999999976999999879988998999999999999---830578789995588558898799999987046
Q ss_pred CHH
Q ss_conf 023
Q gi|254780676|r 189 PDV 191 (329)
Q Consensus 189 pdV 191 (329)
+.+
T Consensus 155 ~~~ 157 (292)
T 2vc6_A 155 PNV 157 (292)
T ss_dssp TTE
T ss_pred CCE
T ss_conf 877
No 69
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=46.74 E-value=15 Score=16.80 Aligned_cols=92 Identities=14% Similarity=0.120 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHCC-CCEEEEECCCCCCCHHHHHHHHHCCCHHHH---HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 9999999985335-868998154623446899987410702332---013830002756389703589999999999708
Q gi|254780676|r 151 FAEVISAIRESAP-STTIEVLTPDFLRKPHALEKVVSAKPDVFN---HNLETVASNYLMVRPGARYFHSLRLLQRVKELD 226 (329)
Q Consensus 151 fa~~I~~Ir~~~P-~~~IEvLiPDf~G~~~al~~v~~A~pdV~n---HNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~ 226 (329)
+.+.++.+++..+ ...|||.+..| +.+...+++++|++= -+.|.++..-.. ++......
T Consensus 185 ~~~~~~~~~~~~~~~~~ieVEv~~~----~ea~~a~~~g~d~i~LDn~~~~~~k~~v~~-------------l~~~~~~~ 247 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEVECLSE----DEATEAIEAGADVIMLDNFKGDGLKMCAQS-------------LKNKWNGK 247 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECSSS----HHHHHHHHHTCSEEECCC---------------------------------
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCH----HHHHHHHHCCCCEEEECCCCHHHHHHHHHH-------------HHHHHCCC
T ss_conf 9999999977414764999625458----889999975999663268997999999999-------------98775448
Q ss_pred CEE-EECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCC
Q ss_conf 916-701404887642068899999999966993997502227
Q gi|254780676|r 227 PLI-FTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQ 268 (329)
Q Consensus 227 ~~i-~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~ 268 (329)
+++ .--||.| +. +.+.++.+.|||++.+|-.-.
T Consensus 248 ~~v~ieaSGGI-----~~----~ni~~ya~tGvD~Is~g~lt~ 281 (294)
T 3c2e_A 248 KHFLLECSGGL-----NL----DNLEEYLCDDIDIYSTSSIHQ 281 (294)
T ss_dssp -CCEEEEECCC-----CC----------CCCSCSEEECGGGTS
T ss_pred CCEEEEEECCC-----CH----HHHHHHHHCCCCEEEECHHHC
T ss_conf 85799998999-----99----999999984989999397771
No 70
>2vxh_A Chlorite dismutase; heme-based enzyme, azospira oryzae strain GR-1, oxidoreductase, chlorate respiration, molecular oxygen production; HET: HEM; 2.1A {Azospira oryzae} PDB: 3m2s_A* 3m2q_A*
Probab=46.72 E-value=15 Score=16.80 Aligned_cols=17 Identities=18% Similarity=0.261 Sum_probs=8.1
Q ss_pred CHHHHHHHHHHHHHHCC
Q ss_conf 82357999999997077
Q gi|254780676|r 114 DPQEPENISWAVRSMKL 130 (329)
Q Consensus 114 D~~EP~rvA~av~~l~L 130 (329)
|+++-+..-....+-.|
T Consensus 86 ~~~~Lq~~~~~~~~t~l 102 (251)
T 2vxh_A 86 DLAKAQTFMREFRSTTI 102 (251)
T ss_dssp SHHHHHHHHHHHHTSTT
T ss_pred CHHHHHHHHHHHHHCCC
T ss_conf 99999999999974447
No 71
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=46.41 E-value=16 Score=16.77 Aligned_cols=86 Identities=12% Similarity=0.162 Sum_probs=59.0
Q ss_pred CHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 87675089726999866522353522344678998888--2357999999997077518985054453453258999999
Q gi|254780676|r 77 NIGECWNKNHATFMILGAICTRACTFCNVATGKPQPLD--PQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEV 154 (329)
Q Consensus 77 Ni~ECw~~gtATFMilG~~CTR~C~FC~V~~G~P~~~D--~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~ 154 (329)
-.+|-++.|-.++-.+|.. .+-|-||+..++.+.|.+ .+...++++.+.+-| |.|+|. |+.......
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~i~v~~~~~~~~~~~~~~~~~~a~elG~~La~~G--~~V~~G--------G~~GlM~a~ 73 (195)
T 1rcu_A 5 HHHHHHSSGRENLYFQGHM-KKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKG--YLVFNG--------GRDGVMELV 73 (195)
T ss_dssp ------------------C-CEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTT--CEEEEC--------CSSHHHHHH
T ss_pred CCCCCCCCHHHHHHHHCCC-CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEECC--------CHHHHHHHH
T ss_conf 4332111056775564376-47989974489999955899999999999999879--999948--------727488999
Q ss_pred HHHHHHHCCCCEEEEECCCCC
Q ss_conf 999985335868998154623
Q gi|254780676|r 155 ISAIRESAPSTTIEVLTPDFL 175 (329)
Q Consensus 155 I~~Ir~~~P~~~IEvLiPDf~ 175 (329)
-+..++.. +..|=+ +|+++
T Consensus 74 a~ga~~~G-G~viGI-iP~~~ 92 (195)
T 1rcu_A 74 SQGVREAG-GTVVGI-LPDEE 92 (195)
T ss_dssp HHHHHHTT-CCEEEE-ESTTC
T ss_pred HHHHHHCC-CEEEEE-CCHHH
T ss_conf 99888629-906887-32676
No 72
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent enzyme, lyase, cytoplasm, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=45.60 E-value=3.8 Score=21.11 Aligned_cols=117 Identities=18% Similarity=0.167 Sum_probs=62.0
Q ss_pred CCCCHHHCCCCCCC----HHHHHHHHHHHHCCCCEEECCCCC------CCHHHHHCCCC-------EEEEEECCCCCC--
Q ss_conf 89882450017998----668999999997498236525788------78767508972-------699986652235--
Q gi|254780676|r 38 MQKPDWIRVRAPVS----SGYKETYNILRSRNLTTVCEEAGC------PNIGECWNKNH-------ATFMILGAICTR-- 98 (329)
Q Consensus 38 ~~kP~Wlk~~~p~~----~~~~~~~~~l~~~~L~TVCeeA~C------PNi~ECw~~gt-------ATFMilG~~CTR-- 98 (329)
.++|..+=+..|+- .+...+.++.+++++.-+-.||.- |..+.++..+- .+.+...++.--
T Consensus 310 ~~~~~~vvit~~TYdG~~~dl~~I~~l~~~~~~~llvDEAhga~~~f~~~~~~~~~~~g~~~~~~~~~div~qS~HK~L~ 389 (755)
T 2vyc_A 310 GQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN 389 (755)
T ss_dssp TCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSS
T ss_pred CCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 47885899965776865069999999998729938964242220013788720221047863235783499975565665
Q ss_pred ---CCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---CCCEEEEEC--CCCCCCC-CCHHHHHHHHHHHH
Q ss_conf ---352234467899888823579999999970---775189850--5445345-32589999999999
Q gi|254780676|r 99 ---ACTFCNVATGKPQPLDPQEPENISWAVRSM---KLSHVVITS--VDRDDLD-DGGAQHFAEVISAI 158 (329)
Q Consensus 99 ---~C~FC~V~~G~P~~~D~~EP~rvA~av~~l---~Lk~vViTS--V~RDDL~-DgGA~hfa~~I~~I 158 (329)
.-..+.|..++ ..+| ..++.++.... .-.|..+-| ++|.-+. .+|...+.+.|+..
T Consensus 390 altqas~lhv~~~~-~~id---~~r~~~a~~~~~STSPsY~l~ASld~a~~~m~~~~G~~L~~~~i~~a 454 (755)
T 2vyc_A 390 ALSQASYIHVREGR-GAIN---FSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEA 454 (755)
T ss_dssp CCTTCEEEEEECCB-TCCC---HHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCC-CCCC---HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56641124423754-5357---99998765010478951788977999999874136699999999999
No 73
>3lmz_A Putative sugar isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=45.40 E-value=16 Score=16.66 Aligned_cols=55 Identities=15% Similarity=0.097 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCH
Q ss_conf 2357999999997077518985054453453258999999999985335868998154623446
Q gi|254780676|r 115 PQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKP 178 (329)
Q Consensus 115 ~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~ 178 (329)
.++..++.+..+.||.+++++-+. ...+.+..+.-++..-...||.--|.+....
T Consensus 88 ~~~~~~~i~~a~~lg~~~i~~~~~---------~~~l~~l~~~a~~~gi~l~iE~~~~~~~~~~ 142 (257)
T 3lmz_A 88 EEEIDRAFDYAKRVGVKLIVGVPN---------YELLPYVDKKVKEYDFHYAIHLHGPDIKTYP 142 (257)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEC---------GGGHHHHHHHHHHHTCEEEEECCCTTCSSSC
T ss_pred HHHHHHHHHHHHHCCCCEEECCCC---------HHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 999999999999859987991667---------9999999999998299999982477542221
No 74
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=45.06 E-value=16 Score=16.63 Aligned_cols=171 Identities=13% Similarity=0.169 Sum_probs=107.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHH
Q ss_conf 88823579999999970775189850544534532589999999999853358689981546234468999874107023
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDV 191 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV 191 (329)
..|+++-..++++...-|++.+=||--+ ....+.|+++++..|++.|-+=+= =+.+.++..+++|.+-
T Consensus 25 ~~~~~~~~~~~~al~~~Gi~~iEITl~t---------~~a~~~i~~l~~~~p~~~vGaGTV---l~~~~~~~a~~aGA~F 92 (224)
T 1vhc_A 25 LDNADDILPLADTLAKNGLSVAEITFRS---------EAAADAIRLLRANRPDFLIAAGTV---LTAEQVVLAKSSGADF 92 (224)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEETTS---------TTHHHHHHHHHHHCTTCEEEEESC---CSHHHHHHHHHHTCSE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCC---------CHHHHHHHHHHHHCCCEEEEEECC---CCHHHHHHHHHHCCCE
T ss_conf 8999999999999998799889996898---------039999999998689918962020---4579999999837998
Q ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEEC------C-
Q ss_conf 320138300027563897035899999999997089167014048876420688999999999669939975------0-
Q gi|254780676|r 192 FNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTM------G- 264 (329)
Q Consensus 192 ~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTi------G- 264 (329)
+ |-|.- .-++++++++.+ +..--|. .|..|+.+++ +.|++++-+ |
T Consensus 93 i-------------vSP~~----~~~v~~~a~~~~--i~~iPG~-----~TpsEi~~A~----~~G~~~vKlFPA~~~gG 144 (224)
T 1vhc_A 93 V-------------VTPGL----NPKIVKLCQDLN--FPITPGV-----NNPMAIEIAL----EMGISAVKFFPAEASGG 144 (224)
T ss_dssp E-------------ECSSC----CHHHHHHHHHTT--CCEECEE-----CSHHHHHHHH----HTTCCEEEETTTTTTTH
T ss_pred E-------------ECCCC----CHHHHHHHHHCC--CCCCCCC-----CCHHHHHHHH----HCCCCEEEECCCCCCCC
T ss_conf 9-------------72789----999999998569--9845885-----8879999999----85999688765211258
Q ss_pred -HHCCCCCCCCCCCCC-----CCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -222786100780002-----3846999999999974962434048300103189999999999854
Q gi|254780676|r 265 -QYLQPTRKHHKVESF-----VTPQDFKSYETIAYSKGFLMVSASPLTRSSYHAGDDFLRLKNNRRQ 325 (329)
Q Consensus 265 -QYL~Ps~~h~pV~ry-----v~P~eF~~~~~~a~~~Gf~~V~SgPlVRSSY~A~e~~~~~~~~~~~ 325 (329)
.||+--..-+|=.+| ++++.+.+|-+.+ ....+..+.|+.-..-+...|..+.++-++
T Consensus 145 ~~~lkal~~p~p~~~f~ptGGV~~~N~~~yl~ag---~v~~~~Gs~l~~~~~i~~~d~~~i~~~a~~ 208 (224)
T 1vhc_A 145 VKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIP---NIVACGGSWFVEKKLIQSNNWDEIGRLVRE 208 (224)
T ss_dssp HHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTST---TBCCEEECGGGCHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCC---CEEEEECHHHCCHHHHHCCCHHHHHHHHHH
T ss_conf 9999856534568718851798988999999389---989998825369777743899999999999
No 75
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, alpha-1,4-glucan-4-glucanohydrolase, thermostability, calcium, sodium; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=44.96 E-value=16 Score=16.62 Aligned_cols=23 Identities=4% Similarity=0.138 Sum_probs=14.4
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCE
Q ss_conf 01799866899999999749823
Q gi|254780676|r 46 VRAPVSSGYKETYNILRSRNLTT 68 (329)
Q Consensus 46 ~~~p~~~~~~~~~~~l~~~~L~T 68 (329)
-++.+-+++.++-+...+.++.-
T Consensus 76 ~~~Gt~~dfk~LV~~aH~~Gi~V 98 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQV 98 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 88999999999999999888989
No 76
>3cij_A UPF0100 protein AF_0094; archaeal periplasmic binding protein, unknown function, metal binding protein, transport protein; 1.07A {Archaeoglobus fulgidus} PDB: 2ons_A 2onk_E 2onr_A
Probab=44.93 E-value=16 Score=16.62 Aligned_cols=43 Identities=16% Similarity=0.255 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCC--CHHHH
Q ss_conf 89999999999853358689981546234468999874107--02332
Q gi|254780676|r 148 AQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAK--PDVFN 193 (329)
Q Consensus 148 A~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~--pdV~n 193 (329)
+.-|.+.|++-.+.+|+++||+-. .|..+.+++++.++ |||+.
T Consensus 16 ~~~~~~~~~~Fe~~~P~I~V~~~~---~~~~~~~~~~~a~g~~pDv~~ 60 (295)
T 3cij_A 16 TEPMKAFKRAFEEKHPNVEVQTEA---AGSAATIRKVTELGRKADVIA 60 (295)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEE---ECHHHHHHHHHTSCCCCSEEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEE---CCCHHHHHHHHHCCCCCCEEE
T ss_conf 999999999999888490899996---880999999996799998899
No 77
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=44.67 E-value=17 Score=16.59 Aligned_cols=208 Identities=12% Similarity=0.120 Sum_probs=112.4
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC-HH------HHHHHHHHHHHHHCCCCEEEE---ECC----------C
Q ss_conf 823579999999970775189850544534532-58------999999999985335868998---154----------6
Q gi|254780676|r 114 DPQEPENISWAVRSMKLSHVVITSVDRDDLDDG-GA------QHFAEVISAIRESAPSTTIEV---LTP----------D 173 (329)
Q Consensus 114 D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~Dg-GA------~hfa~~I~~Ir~~~P~~~IEv---LiP----------D 173 (329)
..++-.+..+....+|++.+.|=.|-.++++|- |+ +...++|++||+..|+..|=+ |.| |
T Consensus 75 Sid~L~~ei~~~~~lGI~avlLFpvi~~~~Kd~~Gs~A~n~~glv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGil~ 154 (360)
T 3obk_A 75 SMEDLLKEVGEARSYGIKAFMLFPKVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLLADVALDPYSSMGHDGVVD 154 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHSTTCEEEEEECSGGGBTTCCSSCBC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCCCCC
T ss_conf 89999999999998899889960776556799886724581168999999999865530200220026665888653124
Q ss_pred C-CC---CHHHHHH-------HHHCCCHHHH------------------HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 2-34---4689998-------7410702332------------------0138300027563897035899999999997
Q gi|254780676|r 174 F-LR---KPHALEK-------VVSAKPDVFN------------------HNLETVASNYLMVRPGARYFHSLRLLQRVKE 224 (329)
Q Consensus 174 f-~G---~~~al~~-------v~~A~pdV~n------------------HNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~ 224 (329)
. .| |...++. ..+||.|+++ ||.+-|+=+.-.+.-.+.|-- =.|.|-.
T Consensus 155 ~~~g~IdND~Tl~~L~k~Als~A~AGADiVAPSDMMDGrV~aIR~aLd~~g~~~v~ImSYsaKfaS~fYG---PFRdA~~ 231 (360)
T 3obk_A 155 EQSGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDGRVSAIRESLDMEGCTDTSILAYSCKYASSFYG---PFRDALD 231 (360)
T ss_dssp TTTCCBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTTHHHHHHHHHHHTTCTTSEEEEEEEEBCCSTTH---HHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCC---HHHHHHC
T ss_conf 6558247198999999999999984798256330146399999999997799886054203455242234---5789851
Q ss_pred CCCEEE-ECCCEEEEEEECHHHHHHHHHHHHHCCCCEEEC---CHHCC---C--CCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 089167-014048876420688999999999669939975---02227---8--61007800023846999999999974
Q gi|254780676|r 225 LDPLIF-TKSGIMLGLGETRNEILQLMDDLRTADVDFLTM---GQYLQ---P--TRKHHKVESFVTPQDFKSYETIAYSK 295 (329)
Q Consensus 225 ~~~~i~-TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTi---GQYL~---P--s~~h~pV~ryv~P~eF~~~~~~a~~~ 295 (329)
..|..- -|++--+--+-..|-+.++..|+.+ |.|+|-+ .-||- . ..-.+||.-|---.||..++..|..-
T Consensus 232 S~p~~g~drksYQmd~~n~~eA~re~~~D~~E-GAD~lMVKPal~yLDii~~~k~~~~~Pv~aYqVSGEYamikaaa~~g 310 (360)
T 3obk_A 232 SHMVGGTDKKTYQMDPSNSREAEREAEADASE-GADMLMVKPGLPYLDVLAKIREKSKLPMVAYHVSGEYAMLKAAAEKG 310 (360)
T ss_dssp CCCSTTCCSTTTSBCTTCSHHHHHHHHHHHHT-TCSEEEEESSGGGHHHHHHHHHHCSSCEEEEECHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHC-CCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCC
T ss_conf 66556888741134988889999999987864-98779962651689999999985499879997346999999999869
Q ss_pred CCC-----------EEECCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 962-----------434048300103189999999999854
Q gi|254780676|r 296 GFL-----------MVSASPLTRSSYHAGDDFLRLKNNRRQ 325 (329)
Q Consensus 296 Gf~-----------~V~SgPlVRSSY~A~e~~~~~~~~~~~ 325 (329)
-+. .--+|-=.=-||+|.+...-+.++.+.
T Consensus 311 ~~d~~~~~~E~l~~~kRAGAd~IiTY~A~~~a~~L~~~~~~ 351 (360)
T 3obk_A 311 YISEKDTVLEVLKSFRRAGADAVATYYAKEAAKWMVEDMKG 351 (360)
T ss_dssp SSCHHHHHHHHHHHHHHHTCSEEEETTHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHC
T ss_conf 97578899999999986399899760099999998863434
No 78
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, loop-6, purine biosynthesis; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=44.46 E-value=17 Score=16.57 Aligned_cols=136 Identities=16% Similarity=0.216 Sum_probs=91.8
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHH-
Q ss_conf 8235799999999707751898505445345325899999999998533586899815462344689998741070233-
Q gi|254780676|r 114 DPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVF- 192 (329)
Q Consensus 114 D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~- 192 (329)
.++..+|+.. +.+.|...+|| |..+|-+.++.+.|+.||+..|++.|=+ .=-...+....++++|.|.+
T Consensus 151 ~~~~~~r~~~-Lv~agvD~ivI------D~ahg~s~~~~~~ik~ik~~~p~~~VIa---GNV~T~e~a~~L~~~GAD~Vk 220 (404)
T 1eep_A 151 DIDTIERVEE-LVKAHVDILVI------DSAHGHSTRIIELIKKIKTKYPNLDLIA---GNIVTKEAALDLISVGADCLK 220 (404)
T ss_dssp CTTHHHHHHH-HHHTTCSEEEE------CCSCCSSHHHHHHHHHHHHHCTTCEEEE---EEECSHHHHHHHHTTTCSEEE
T ss_pred CHHHHHHHHH-HHHCCCCEEEE------CCCCCCHHHHHHHHHHHHHHCCCCCEEC---CCCCCHHHHHHHHHCCCCEEE
T ss_conf 8889999999-98636877751------1456655889999999998789986771---455569999999975999667
Q ss_pred ----HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCC
Q ss_conf ----2013830002756389703589999999999708916701404887642068899999999966993997502227
Q gi|254780676|r 193 ----NHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQ 268 (329)
Q Consensus 193 ----nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~ 268 (329)
.=-+=|-+..+..-+||.+=- .++...++..+-.|..--|| -+.-+|..++ .+|-|.+-||-+|.
T Consensus 221 VGiG~Gs~CtTr~~tGvG~pq~sAv--~~~~~~~~~~~vpIIADGGi-----~~~GDi~KAl----a~GAdaVMlG~~lA 289 (404)
T 1eep_A 221 VGIGPGSICTTRIVAGVGVPQITAI--CDVYEACNNTNICIIADGGI-----RFSGDVVKAI----AAGADSVMIGNLFA 289 (404)
T ss_dssp ECSSCSTTSHHHHHHCCCCCHHHHH--HHHHHHHTTSSCEEEEESCC-----CSHHHHHHHH----HHTCSEEEECHHHH
T ss_pred ECCCCCCCCCCCCEECCCCCHHHHH--HHHHHHHCCCCCCEECCCCC-----CCCHHHHHHH----HCCCCHHHHCHHHC
T ss_conf 5255786656741135551148999--99999862468766736886-----8750899999----70752655341433
Q ss_pred CC
Q ss_conf 86
Q gi|254780676|r 269 PT 270 (329)
Q Consensus 269 Ps 270 (329)
=+
T Consensus 290 g~ 291 (404)
T 1eep_A 290 GT 291 (404)
T ss_dssp TB
T ss_pred CC
T ss_conf 37
No 79
>3kts_A Glycerol uptake operon antiterminator regulatory protein; structural genomics, PSI-2, protein structure initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=44.14 E-value=10 Score=18.09 Aligned_cols=92 Identities=12% Similarity=0.255 Sum_probs=56.3
Q ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE-ECCCCCCCHHHHHHHHH-CCCHH------
Q ss_conf 99999997077518985054453453258999999999985335868998-15462344689998741-07023------
Q gi|254780676|r 120 NISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEV-LTPDFLRKPHALEKVVS-AKPDV------ 191 (329)
Q Consensus 120 rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEv-LiPDf~G~~~al~~v~~-A~pdV------ 191 (329)
.+-++++. ...++++-..+ -....+.+..+|+.+.-+-|-+ |+..+..++.+++-+.. .+||-
T Consensus 21 ~le~al~s-~~~~iflL~g~--------I~~l~~iv~~~k~~gK~vfVHiDLI~GL~~d~~av~fL~~~~~~dGIISTk~ 91 (192)
T 3kts_A 21 DMEKILEL-DLTYMVMLETH--------VAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRG 91 (192)
T ss_dssp HHHHHTTS-SCCEEEECSEE--------TTTHHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCH
T ss_pred HHHHHHCC-CCCEEEEECCC--------HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCH
T ss_conf 99999758-99899995371--------8779999999998799899985316777888899999998428998997889
Q ss_pred --H----HHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf --3----201383000275638970358999999999
Q gi|254780676|r 192 --F----NHNLETVASNYLMVRPGARYFHSLRLLQRV 222 (329)
Q Consensus 192 --~----nHNiETV~rLy~~VRp~a~Y~rSL~vL~~a 222 (329)
+ ..++-|+-|+| +-+...|+++++.++..
T Consensus 92 ~~I~~Ak~~Gl~tIqR~F--liDS~al~~~~~~i~~~ 126 (192)
T 3kts_A 92 NAIMKAKQHKMLAIQRLF--MIDSSAYNKGVALIQKV 126 (192)
T ss_dssp HHHHHHHHTTCEEEEEEE--CCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEEE--EEEHHHHHHHHHHHHHC
T ss_conf 999999977990797663--44276899999998547
No 80
>3k01_A Acarbose/maltose binding protein GACH; ABC transporter, acarbose-binding protein, transport protein; 1.35A {Streptomyces glaucescens} PDB: 3jzj_A* 3k00_A* 3k02_A*
Probab=42.95 E-value=18 Score=16.41 Aligned_cols=14 Identities=14% Similarity=0.109 Sum_probs=5.4
Q ss_pred CCCHHHHHHHHHHH
Q ss_conf 88823579999999
Q gi|254780676|r 112 PLDPQEPENISWAV 125 (329)
Q Consensus 112 ~~D~~EP~rvA~av 125 (329)
|-..+|-..+++.+
T Consensus 160 p~Twde~~~~~~~~ 173 (412)
T 3k01_A 160 PGSVAELKTAAAEI 173 (412)
T ss_dssp CSBHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
T ss_conf 88789999999999
No 81
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, degradation of homoprotocatechuate, class II aldolase; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=42.57 E-value=18 Score=16.37 Aligned_cols=130 Identities=11% Similarity=0.125 Sum_probs=76.0
Q ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCH--HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCH-HHHHCC
Q ss_conf 9999999707751898505445345325--8999999999985335868998154623446899987410702-332013
Q gi|254780676|r 120 NISWAVRSMKLSHVVITSVDRDDLDDGG--AQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPD-VFNHNL 196 (329)
Q Consensus 120 rvA~av~~l~Lk~vViTSV~RDDL~DgG--A~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pd-V~nHNi 196 (329)
.+++.....|+.||+| |+..|. -.-...++++++.. ++..=|-+|+ .+...+.+++|+|.+ |+-=++
T Consensus 30 ~~~e~l~~~G~Dfv~i------D~EHg~~~~~~~~~~i~a~~~~--g~~~~vRvp~--~~~~~i~r~LD~Ga~GIivP~v 99 (267)
T 2vws_A 30 YMAEIAATSGYDWLLI------DGEHAPNTIQDLYHQLQAVAPY--ASQPVIRPVE--GSKPLIKQVLDIGAQTLLIPMV 99 (267)
T ss_dssp HHHHHHHTTCCSEEEE------ETTTSCCCHHHHHHHHHHHTTS--SSEEEEECSS--CCHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHCCCCEEEE------CCCCCCCCHHHHHHHHHHHHCC--CCCCEEEECC--CCHHHHHHHHHCCCCEEEECCC
T ss_conf 9999998379899998------1668988899999999886146--9974587147--8479999998389988998994
Q ss_pred CCCCCC--------CCCC--------CCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCE
Q ss_conf 830002--------7563--------897035899999999997089167014048876420688999999999669939
Q gi|254780676|r 197 ETVASN--------YLMV--------RPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDF 260 (329)
Q Consensus 197 ETV~rL--------y~~V--------Rp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdi 260 (329)
+|++.. |+.. +..+.|... .-.+.+..+.++ +++=+=||.+=|-++=+=+.--|+|.
T Consensus 100 ~s~eea~~~v~~~rypP~G~Rg~~~~~~~~~~~~~--~~~y~~~~n~~~-----~vi~qIEt~~av~nleeI~av~GvD~ 172 (267)
T 2vws_A 100 DTAEQARQVVSATRYPPYGERGVGASVARAARWGR--IENYMAQVNDSL-----CLLVQVESKTALDNLDEILDVEGIDG 172 (267)
T ss_dssp CSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGT--STTHHHHHHHHC-----EEEEECCSHHHHHTHHHHHTSTTCCE
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHC-----CCHHCCCCHHHHHHHHHHHCCCCCCE
T ss_conf 99999999999860699999988765332124676--368999998642-----22020266999997998745689853
Q ss_pred EECCHH
Q ss_conf 975022
Q gi|254780676|r 261 LTMGQY 266 (329)
Q Consensus 261 lTiGQY 266 (329)
+-||.|
T Consensus 173 i~iGp~ 178 (267)
T 2vws_A 173 VFIGPA 178 (267)
T ss_dssp EEECHH
T ss_pred EEECCH
T ss_conf 567807
No 82
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=42.45 E-value=18 Score=16.36 Aligned_cols=134 Identities=12% Similarity=0.033 Sum_probs=76.3
Q ss_pred HHHHHHHCCCEEEEECCCC-CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC-----H----HHHHHHHHCCCHH
Q ss_conf 9999970775189850544-5345325899999999998533586899815462344-----6----8999874107023
Q gi|254780676|r 122 SWAVRSMKLSHVVITSVDR-DDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRK-----P----HALEKVVSAKPDV 191 (329)
Q Consensus 122 A~av~~l~Lk~vViTSV~R-DDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~-----~----~al~~v~~A~pdV 191 (329)
++-++++|..-|.++-.=+ ||-++.-....++.+++-++..--..+|+++++..+. . .+.+...+.|.|+
T Consensus 114 v~~~~~~GadaVk~lv~~~pdd~~~~~~~~l~~l~~~c~~~g~p~llE~~~~~~~~~d~~~~~~~i~~a~r~~~e~G~Di 193 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADL 193 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSE
T ss_pred HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 99998564878999986289722899999999999999863996699985147776654107999999999998739987
Q ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHC
Q ss_conf 3201383000275638970358999999999970891670140488764206889999999996699399750222
Q gi|254780676|r 192 FNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYL 267 (329)
Q Consensus 192 ~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL 267 (329)
+-=++... .......-++.++.+-+.. ..-=+++|.|-+.+++.+.++.-.++||.=+.+|-=+
T Consensus 194 ~K~~~P~~--------~~~~~~~~~~~~~~~~~~~----~~p~vvLggg~~~e~f~~~l~~A~~aGa~G~~~GR~i 257 (304)
T 1to3_A 194 YKVEMPLY--------GKGARSDLLTASQRLNGHI----NMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAV 257 (304)
T ss_dssp EEECCGGG--------GCSCHHHHHHHHHHHHHTC----CSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHH
T ss_pred EEEECCCC--------CCHHHHHHHHHHHHHHCCC----CCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECHHH
T ss_conf 99978877--------5322468999999985158----9948998289898999999999997699399856264
No 83
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B
Probab=42.24 E-value=18 Score=16.34 Aligned_cols=86 Identities=12% Similarity=0.144 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHHHHHCCC--EEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCH
Q ss_conf 8823579999999970775--18985054453453258999999999985335868998154623446899987410702
Q gi|254780676|r 113 LDPQEPENISWAVRSMKLS--HVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPD 190 (329)
Q Consensus 113 ~D~~EP~rvA~av~~l~Lk--~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pd 190 (329)
....+-+|+++...++..+ .--+|+|+....-...-..|-++.+++.+..|++.+|-+.= |+.-.-+-..|.
T Consensus 160 ~Tr~~~eRI~r~AFe~Ar~~~rkkvt~v~Kanv~~~s~glf~~~~~eva~eypdi~~~~~~v------D~~a~~lv~~P~ 233 (354)
T 3blx_B 160 ITRDASERVIRYAFEYARAIGRPRVIVVHKSTIQRLADGLFVNVAKELSKEYPDLTLETELI------DNSVLKVVTNPS 233 (354)
T ss_dssp EEHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTCHHHHHHHHHHHHHGGGCTTSEEEEEEH------HHHHHHHHHCGG
T ss_pred EEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEE------HHHHHHHHCCHH
T ss_conf 86116889999989999973899733786255301308999999999998768762102024------167777502987
Q ss_pred HHHHCCCCCCCCCC
Q ss_conf 33201383000275
Q gi|254780676|r 191 VFNHNLETVASNYL 204 (329)
Q Consensus 191 V~nHNiETV~rLy~ 204 (329)
.|+.-+--.+.||.
T Consensus 234 ~fD~~Viv~~NlfG 247 (354)
T 3blx_B 234 AYTDAVSVCPNLYG 247 (354)
T ss_dssp GGTTEEEEECHHHH
T ss_pred HHCCCEEECCCHHH
T ss_conf 72653453240467
No 84
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=41.81 E-value=18 Score=16.29 Aligned_cols=14 Identities=14% Similarity=0.389 Sum_probs=6.0
Q ss_pred HHHHHHHHCCCCEE
Q ss_conf 99999997498236
Q gi|254780676|r 56 ETYNILRSRNLTTV 69 (329)
Q Consensus 56 ~~~~~l~~~~L~TV 69 (329)
.+-+.+.+.+.+-|
T Consensus 31 ~i~~~L~~~Gi~~I 44 (298)
T 2cw6_A 31 KLIDMLSEAGLSVI 44 (298)
T ss_dssp HHHHHHHHTTCSEE
T ss_pred HHHHHHHHHCCCEE
T ss_conf 99999998397999
No 85
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae TIGR4} SCOP: c.124.1.8
Probab=41.77 E-value=18 Score=16.29 Aligned_cols=163 Identities=16% Similarity=0.159 Sum_probs=89.2
Q ss_pred HHHHHHH-HHCCCEEEEECCCCCCC----CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHH
Q ss_conf 9999999-70775189850544534----532589999999999853358689981546234468999874107023320
Q gi|254780676|r 120 NISWAVR-SMKLSHVVITSVDRDDL----DDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNH 194 (329)
Q Consensus 120 rvA~av~-~l~Lk~vViTSV~RDDL----~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nH 194 (329)
.+.+..+ +.||+.|+|..-..||- .+.-+..-|+-+..+ ..++..|-+ -+|. .+..+++.-+..-..
T Consensus 11 eLe~~L~~~fgLk~~~Vvp~~~~~~~~~~~~~l~~~aA~~l~~~--l~~~~~IGv----~wG~--Tl~~~~~~l~~~~~~ 82 (266)
T 2gnp_A 11 KLENYVKEKYSLESLEIIPNEFDDTPTILSERISQVAAGVLRNL--IDDNMKIGF----SWGK--SLSNLVDLIHSKSVR 82 (266)
T ss_dssp HHHHHHHHHHTCSEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH--CCTTCEEEE----CCSH--HHHHHHHHCCCCCCS
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH--CCCCCEEEE----ECCH--HHHHHHHHHCCCCCC
T ss_conf 99999999829997999827865476799999999999999985--778998999----3888--899999971755767
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE-EECCCEEEEEEECHH------HHHHHHHHHHHCCCCEEECCHHC
Q ss_conf 13830002756389703589999999999708916-701404887642068------89999999996699399750222
Q gi|254780676|r 195 NLETVASNYLMVRPGARYFHSLRLLQRVKELDPLI-FTKSGIMLGLGETRN------EILQLMDDLRTADVDFLTMGQYL 267 (329)
Q Consensus 195 NiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i-~TKSGlMvGLGEt~e------Ei~e~l~DLr~~gvdilTiGQYL 267 (329)
|+..|+=.=..-++...|+-.--+-+.++..+... .--.-+++.=.|..+ .+-++++-.+.+++-++.||. +
T Consensus 83 ~~~vv~l~Gg~~~~~~~~~~~~i~~~lA~~~~~~~~~l~aP~~~~s~~~~~~l~~~~~i~~~~~~~~~~diaivGIG~-~ 161 (266)
T 2gnp_A 83 NVHFYPLAGGPSHIHAKYHVNTLIYEMSRKFHGECTFMNATIVQENKLLADGILQSRYFENLKNSWKDLDIAVVGIGD-F 161 (266)
T ss_dssp SCEEEESBCCCTTSCGGGSHHHHHHHHHHHHTCEECCCCSCSBCSSHHHHHHHHTSTTTHHHHHHTTSCSEEEECCEE-C
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCEEEEECCC-C
T ss_conf 734882478877776656899999999998099665224755679999999997576999999998449999995766-7
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 7861007800023846999999999
Q gi|254780676|r 268 QPTRKHHKVESFVTPQDFKSYETIA 292 (329)
Q Consensus 268 ~Ps~~h~pV~ryv~P~eF~~~~~~a 292 (329)
.+... +....|+++++++++.+.+
T Consensus 162 ~~~~~-~~~~~~~~~~~~~~l~~~g 185 (266)
T 2gnp_A 162 SNKGK-HQWLDMLTEDDFKELTKVK 185 (266)
T ss_dssp SHHHH-HTTTTTSCHHHHHHHHHTT
T ss_pred CCCCC-CCCCCCCCHHHHHHHHHCC
T ss_conf 77753-0036899999999998768
No 86
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} PDB: 3exs_A* 3ext_A
Probab=41.38 E-value=18 Score=16.25 Aligned_cols=20 Identities=0% Similarity=-0.157 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHCCCEEEEEC
Q ss_conf 79999999970775189850
Q gi|254780676|r 118 PENISWAVRSMKLSHVVITS 137 (329)
Q Consensus 118 P~rvA~av~~l~Lk~vViTS 137 (329)
|..+++.+...+-.++.+-+
T Consensus 71 p~t~~~~~~~~gad~itvh~ 90 (221)
T 3exr_A 71 GGTVAKNNAVRGADWMTCIC 90 (221)
T ss_dssp HHHHHHHHHTTTCSEEEEET
T ss_pred CHHHHHHHHHHCCCEEEECH
T ss_conf 20578999871698999804
No 87
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical protein; PFAM04748, structural genomics, PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=41.09 E-value=17 Score=16.50 Aligned_cols=161 Identities=7% Similarity=0.095 Sum_probs=77.8
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC------------CCCCHHHHHHH
Q ss_conf 269998665223535223446789988882357999999997077518985054453------------45325899999
Q gi|254780676|r 86 HATFMILGAICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKLSHVVITSVDRDD------------LDDGGAQHFAE 153 (329)
Q Consensus 86 tATFMilG~~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDD------------L~DgGA~hfa~ 153 (329)
-|||.|.|.. + + ...+++.+...|-.-. +-+...++ +.+.....+.+
T Consensus 29 ~aTffv~~~~--------------~---~---~~~~~~~~~~~Ghei~-~H~~~h~~~~~~~~~~~~~l~~~~~~~ei~~ 87 (245)
T 2nly_A 29 PVTVAVMPFL--------------E---H---STKQAEIAQAAGLEVI-VHMPLEPKKGKISWLGPSGITSNLSVGEVKS 87 (245)
T ss_dssp CEEEEECSSS--------------T---T---HHHHHHHHHHTTCEEE-EEEEECCC--------CCCBCTTCCHHHHHH
T ss_pred CEEEEECCCC--------------C---C---CHHHHHHHHHCCCEEE-EECCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 8799986898--------------5---6---6899999998699678-8646565545556666554653159999999
Q ss_pred HHHHHHHHCCCCEEE--EECCCCCCCHHHHHHHHHCCC---HHHH----------------HCCCCCCCCCCCCCC---C
Q ss_conf 999998533586899--815462344689998741070---2332----------------013830002756389---7
Q gi|254780676|r 154 VISAIRESAPSTTIE--VLTPDFLRKPHALEKVVSAKP---DVFN----------------HNLETVASNYLMVRP---G 209 (329)
Q Consensus 154 ~I~~Ir~~~P~~~IE--vLiPDf~G~~~al~~v~~A~p---dV~n----------------HNiETV~rLy~~VRp---~ 209 (329)
.+.......++..-- -..+-|-++.+.++.+..... -.|- .++-+ ....|-+ .
T Consensus 88 ~l~~~~~~i~~a~g~~~~~~s~~t~~~~~~~~~~~~~~~~~~~frp~~~~~~~~~~~~a~~~G~~~---~~~~v~~~d~~ 164 (245)
T 2nly_A 88 RVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEKNAFIIDSGTSPHSLIPQLAEELEVPY---ATRSIFLDNTH 164 (245)
T ss_dssp HHHHHHHHSTTCCEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEEECCCCSSCSHHHHHHHTTCCE---EECCEESCCTT
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCEE---EEEEEECCCCC
T ss_conf 999987646344154246544332677889999997475870660798862478999999879718---99997337554
Q ss_pred CHHHHHHHHHHHHHHCCCEEEECCCEEEEE-E----ECHHHHHHHHHHHHHCCCCEEECCHHCCCCCC
Q ss_conf 035899999999997089167014048876-4----20688999999999669939975022278610
Q gi|254780676|r 210 ARYFHSLRLLQRVKELDPLIFTKSGIMLGL-G----ETRNEILQLMDDLRTADVDFLTMGQYLQPTRK 272 (329)
Q Consensus 210 a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGL-G----Et~eEi~e~l~DLr~~gvdilTiGQYL~Ps~~ 272 (329)
.+.......+..+.... ..-.+.|+++. | +|-+-+-+.+..|++-|..++|+.|.|.....
T Consensus 165 ~~~~~~~~~~~~~~~~a--~~~g~~IvL~H~~~~~~~T~eaL~~~i~~L~~~Gy~fVtlsell~~p~~ 230 (245)
T 2nly_A 165 SSRKEVIKNMRKLAKKA--KQGSEPIGIGHVGVRGDETYAGIRSMLDEFQAESIQLVPVSQLLPSPIE 230 (245)
T ss_dssp CCHHHHHHHHHHHHHHH--HTTSCCEEEEECSTTHHHHHHHHGGGHHHHHHTTEEECCGGGGCC----
T ss_pred CCHHHHHHHHHHHHHHH--HCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCHHH
T ss_conf 44278999999999974--4179728997479995679999999999999799199987994066000
No 88
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=39.27 E-value=20 Score=16.03 Aligned_cols=241 Identities=11% Similarity=0.120 Sum_probs=125.2
Q ss_pred HHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH---HHHHHHHHHHHHHCCC
Q ss_conf 9999999974982365257887876750897269998665223535223446789988882---3579999999970775
Q gi|254780676|r 55 KETYNILRSRNLTTVCEEAGCPNIGECWNKNHATFMILGAICTRACTFCNVATGKPQPLDP---QEPENISWAVRSMKLS 131 (329)
Q Consensus 55 ~~~~~~l~~~~L~TVCeeA~CPNi~ECw~~gtATFMilG~~CTR~C~FC~V~~G~P~~~D~---~EP~rvA~av~~l~Lk 131 (329)
..+.+-|++....++=. .|.+.-=|. -+-|=|..| .||.++.-.|-.+-. ..-.........+|.-
T Consensus 501 ~~I~~yL~g~~~~~~~~---~p~~p~f~t-----~~dm~DLs~---~~~Gl~~~NP~~lASg~~~~~~~~i~~~~~~G~G 569 (1025)
T 1gte_A 501 WYIHKYIQAQYGASVSA---KPELPLFYT-----PVDLVDISV---EMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWG 569 (1025)
T ss_dssp HHHHHHHHHHTTCCCCS---SCCBCCCCC-----GGGGCCCCE---EETTEEESSSEEECSSGGGSSHHHHHHHHHHTCS
T ss_pred HHHHHHHHCCCCCCCCC---CCCCCCCCC-----CCCCCCCEE---EECCCCCCCCCEECCCCCCCHHHHHHHHHHCCCC
T ss_conf 99999970478989899---975233446-----666455112---4578314896267788761589999999870887
Q ss_pred EEEEECCC--------------------------------CCCCCCCHHHHHHHHHHHHHHHCCCCEE-EEECCCC-CCC
Q ss_conf 18985054--------------------------------4534532589999999999853358689-9815462-344
Q gi|254780676|r 132 HVVITSVD--------------------------------RDDLDDGGAQHFAEVISAIRESAPSTTI-EVLTPDF-LRK 177 (329)
Q Consensus 132 ~vViTSV~--------------------------------RDDL~DgGA~hfa~~I~~Ir~~~P~~~I-EvLiPDf-~G~ 177 (329)
.+|+-++. +--+++.|+..|.+.|+++++..|...+ --+.-.. ..+
T Consensus 570 ~vv~kTit~~~~~~~n~~PR~~r~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~i~~~k~~~p~~~~Iasi~~~~~~ed 649 (1025)
T 1gte_A 570 FALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKND 649 (1025)
T ss_dssp EEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHH
T ss_pred EEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
T ss_conf 28851114563224788860796367753105101143110235776499999999998751788826977079999999
Q ss_pred -HHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC-----CCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHH
Q ss_conf -6899987410702332013830002756389-----7035899999999997089167014048876420688999999
Q gi|254780676|r 178 -PHALEKVVSAKPDVFNHNLETVASNYLMVRP-----GARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMD 251 (329)
Q Consensus 178 -~~al~~v~~A~pdV~nHNiETV~rLy~~VRp-----~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~ 251 (329)
.+.++.+.+++.|.+-=|+-.. .....|. +-+.+...++++.+|+.- +-=+++=|+=...++.+...
T Consensus 650 ~~~la~~~e~~gaD~iElNiScP--n~~~~r~~g~~~g~~p~~~~~i~~~Vr~~~-----~iPv~vKLsP~~tdi~~ia~ 722 (1025)
T 1gte_A 650 WMELSRKAEASGADALELNLSCP--HGMGERGMGLACGQDPELVRNICRWVRQAV-----QIPFFAKLTPNVTDIVSIAR 722 (1025)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCB--CCCC-----SBGGGCHHHHHHHHHHHHHHC-----SSCEEEEECSCSSCHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-----CCCEEEECCCCCHHHHHHHH
T ss_conf 99999998754999899979999--998843223101469999999999997578-----99789982888162999999
Q ss_pred HHHHCCCCEEECCHH------CCCCCCCCCCC-------------CCCCHHHHHHHHHHHHHC-CCCEEECCCCCCCCHH
Q ss_conf 999669939975022------27861007800-------------023846999999999974-9624340483001031
Q gi|254780676|r 252 DLRTADVDFLTMGQY------LQPTRKHHKVE-------------SFVTPQDFKSYETIAYSK-GFLMVSASPLTRSSYH 311 (329)
Q Consensus 252 DLr~~gvdilTiGQY------L~Ps~~h~pV~-------------ryv~P~eF~~~~~~a~~~-Gf~~V~SgPlVRSSY~ 311 (329)
.+.+.|.|-+++.-= +......+|.. ..+.|--.....+++... ++.-+.+|= |.|.-.
T Consensus 723 aa~~~Gadgv~~iNT~~~~~~id~d~~~~~~~~~~~~~~~GGlSG~aikp~aLr~V~~l~~~~~~ipIig~GG-I~s~~D 801 (1025)
T 1gte_A 723 AAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGG-IDSAES 801 (1025)
T ss_dssp HHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESS-CCSHHH
T ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECC-CCCHHH
T ss_conf 9998499899996777754553433344544455566662410168888999999999998679997999889-799999
Q ss_pred HHH
Q ss_conf 899
Q gi|254780676|r 312 AGD 314 (329)
Q Consensus 312 A~e 314 (329)
|-|
T Consensus 802 a~e 804 (1025)
T 1gte_A 802 GLQ 804 (1025)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 89
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=39.05 E-value=20 Score=16.01 Aligned_cols=22 Identities=9% Similarity=0.212 Sum_probs=12.8
Q ss_pred CCCCCHHHHHHHHHHHHCCCCE
Q ss_conf 1799866899999999749823
Q gi|254780676|r 47 RAPVSSGYKETYNILRSRNLTT 68 (329)
Q Consensus 47 ~~p~~~~~~~~~~~l~~~~L~T 68 (329)
++.+.+.|.++-+.+.+.++.-
T Consensus 76 ~~Gt~~dfk~LV~~~H~~GI~V 97 (480)
T 1ud2_A 76 KYGTKAQLERAIGSLKSNDINV 97 (480)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCHHHHHHHHHHHHHCCCEE
T ss_conf 8999999999999999889999
No 90
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=38.65 E-value=20 Score=15.96 Aligned_cols=92 Identities=15% Similarity=0.131 Sum_probs=44.2
Q ss_pred HHHCCCCCCCCCCCCHHHCCCCCCC---------HHHHHHH---HHHHHCCCCEEECCCCCCCHHHHHCCCCEEEEEECC
Q ss_conf 2421488888889882450017998---------6689999---999974982365257887876750897269998665
Q gi|254780676|r 27 PEKIHKPDTEKMQKPDWIRVRAPVS---------SGYKETY---NILRSRNLTTVCEEAGCPNIGECWNKNHATFMILGA 94 (329)
Q Consensus 27 p~k~~~p~~~~~~kP~Wlk~~~p~~---------~~~~~~~---~~l~~~~L~TVCeeA~CPNi~ECw~~gtATFMilG~ 94 (329)
|..++..+..+...|+|++..--.+ -.+..+. .-|++++.++|.=.---|+....-..|=|+
T Consensus 76 ~~~~~~~d~~r~~~~~w~~~~~~~~~~~y~~~f~Gdl~Gl~~kLdYLk~LGV~~I~L~Pi~~~~~~~~d~GY~v------ 149 (628)
T 1g5a_A 76 NSSLKDIDIARENNPDWILSNKQVGGVCYVDLFAGDLKGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAV------ 149 (628)
T ss_dssp CHHHHHHHHHHHTCGGGGGCTTCCEEEECHHHHHSSHHHHHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSC------
T ss_pred CHHHHHHHHHCCCCCCHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC------
T ss_conf 87552223302238640117672468884424585999999856899973999899798868998778999676------
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf 22353522344678998888235799999999707751
Q gi|254780676|r 95 ICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKLSH 132 (329)
Q Consensus 95 ~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~Lk~ 132 (329)
-.|-+|+ |.-=+.+|=+++.+++.+.|++=
T Consensus 150 -----~dy~~Vd---p~lGt~~df~~Lv~~aH~~GI~V 179 (628)
T 1g5a_A 150 -----SSYRDVN---PALGTIGDLREVIAALHEAGISA 179 (628)
T ss_dssp -----SCSSSBC---TTTCCHHHHHHHHHHHHHTTCEE
T ss_pred -----CCCCCCC---CCCCCHHHHHHHHHHHHHCCCEE
T ss_conf -----5778767---24499999999999999879989
No 91
>3k35_A Mono-ADP-ribosyltransferase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, structural genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=37.73 E-value=11 Score=17.97 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=21.9
Q ss_pred CHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCC-CCEEEEEECCCCCCCCCCCC
Q ss_conf 8668999999997498236525788787675089-72699986652235352234
Q gi|254780676|r 51 SSGYKETYNILRSRNLTTVCEEAGCPNIGECWNK-NHATFMILGAICTRACTFCN 104 (329)
Q Consensus 51 ~~~~~~~~~~l~~~~L~TVCeeA~CPNi~ECw~~-gtATFMilG~~CTR~C~FC~ 104 (329)
......+..+-+...+..| -.-+.-++.+--+- ..-.+-|-|+.=+=.|.-|.
T Consensus 92 n~~H~~La~L~~~g~~~~v-iTQNIDgLh~~AG~~~~~vielHGsl~~~~C~~C~ 145 (318)
T 3k35_A 92 TQTHMALVQLERVGLLRFL-VSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCK 145 (318)
T ss_dssp CHHHHHHHHHHHTTCCCEE-EECCCSCHHHHBTCCGGGEEETTCCTTEEEETTTC
T ss_pred CHHHHHHHHHHHCCCCCEE-EECCCCCHHHHCCCCCCCEEEEEECCCEEEECCCC
T ss_conf 8899999999974997438-85156545867699822155343011479989999
No 92
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=37.50 E-value=21 Score=15.84 Aligned_cols=43 Identities=28% Similarity=0.404 Sum_probs=34.3
Q ss_pred CCCEEEEE-------CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 77518985-------05445345325899999999998533586899815
Q gi|254780676|r 129 KLSHVVIT-------SVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 129 ~Lk~vViT-------SV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
+-..|||| .-+|+||-..-|..|.+.+.+|++.+|+..+=+.+
T Consensus 67 ~aDivvitaG~~~k~g~tR~dll~~Na~I~~~i~~~i~~~~p~~ivivvs 116 (304)
T 2v6b_A 67 DAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS 116 (304)
T ss_dssp TCSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 88889980688889999888988746799999999987429973999955
No 93
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein ligase, unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=37.26 E-value=19 Score=16.22 Aligned_cols=41 Identities=17% Similarity=0.236 Sum_probs=33.1
Q ss_pred CEEEEE------CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 518985------05445345325899999999998533586899815
Q gi|254780676|r 131 SHVVIT------SVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 131 k~vViT------SV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
..|||| .-+|+||-..-+..|.+.+++|.+.+|+..|=+.+
T Consensus 79 dvvvitag~rk~g~tR~dll~~N~~I~~~~~~~i~~~~p~~ivivvs 125 (303)
T 2i6t_A 79 KVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS 125 (303)
T ss_dssp SEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 48997068899998888998876999999999862259973999917
No 94
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=36.82 E-value=7.6 Score=18.97 Aligned_cols=53 Identities=13% Similarity=0.113 Sum_probs=22.5
Q ss_pred CCHHHHHCCC--CEEEEEECCC---C-CCCCCCCCCCCCC-------CC-CCCHHHHHHHHHHHHHH
Q ss_conf 7876750897--2699986652---2-3535223446789-------98-88823579999999970
Q gi|254780676|r 76 PNIGECWNKN--HATFMILGAI---C-TRACTFCNVATGK-------PQ-PLDPQEPENISWAVRSM 128 (329)
Q Consensus 76 PNi~ECw~~g--tATFMilG~~---C-TR~C~FC~V~~G~-------P~-~~D~~EP~rvA~av~~l 128 (329)
|-+-|=|-.+ ..-.+++||. | +=..+-|++.... |. .++.+.-+++-++..++
T Consensus 196 ~~~iE~~i~~~rhievqv~~d~~G~~v~~~~r~csiqr~~qk~ie~aPa~~~~~~~~~~~~~~a~~~ 262 (681)
T 3n6r_A 196 RIFIEKFVTQPRHIEIQVLCDSHGNGIYLGERECSIQRRNQKVVEEAPSPFLDEATRRAMGEQAVAL 262 (681)
T ss_dssp -------CCSCEEEEEEEECCSSSCCEEEEEEECCCEETTEECEEEESCSSCCHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 6899982122301178999987898899942447654178526997589999999999999999999
No 95
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=36.75 E-value=22 Score=15.76 Aligned_cols=42 Identities=26% Similarity=0.381 Sum_probs=34.3
Q ss_pred CCEEEEEC-------CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 75189850-------5445345325899999999998533586899815
Q gi|254780676|r 130 LSHVVITS-------VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 130 Lk~vViTS-------V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
-..||||. -+|+||-..-|..|.+.+.+|.+.+|+..+=+.+
T Consensus 73 adivVi~ag~~r~~g~~R~dl~~~Na~I~~~i~~~i~~~~p~~ivivvt 121 (317)
T 2ewd_A 73 SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT 121 (317)
T ss_dssp CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 9879994788899898989997734568999999999649994799924
No 96
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=36.47 E-value=22 Score=15.73 Aligned_cols=127 Identities=15% Similarity=0.129 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCC
Q ss_conf 57999999997077518985054453453258999999999985335868998154623446899987410702332013
Q gi|254780676|r 117 EPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNL 196 (329)
Q Consensus 117 EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNi 196 (329)
.|.+..+.....|-.++.+-..+-++. .-++|+.||+.+-.+.| +|-|+- ..+.++.+++- .|.+ -+
T Consensus 68 ~P~~~i~~~~~~ga~~i~~H~Ea~~~~-------~~~~i~~i~~~g~~~Gi-alnp~T--~~~~i~~~l~~-~D~v--l~ 134 (231)
T 3ctl_A 68 RPQDYIAQLARAGADFITLHPETINGQ-------AFRLIDEIRRHDMKVGL-ILNPET--PVEAMKYYIHK-ADKI--TV 134 (231)
T ss_dssp CGGGTHHHHHHHTCSEEEECGGGCTTT-------HHHHHHHHHHTTCEEEE-EECTTC--CGGGGTTTGGG-CSEE--EE
T ss_pred CHHHHHHHHHHCCCCEEEEEHHHHCCC-------HHHHHHHHHHCCCEEEE-EECCCC--CHHHHHHHHCC-CCEE--EE
T ss_conf 888999999866998799632543035-------99999999977987999-956999--70565523133-2889--99
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHH----CCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECC-HHC
Q ss_conf 8300027563897035899999999997----0891670140488764206889999999996699399750-222
Q gi|254780676|r 197 ETVASNYLMVRPGARYFHSLRLLQRVKE----LDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMG-QYL 267 (329)
Q Consensus 197 ETV~rLy~~VRp~a~Y~rSL~vL~~aK~----~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiG-QYL 267 (329)
=|| .|..--|.-...+|+-++.+++ .++++ -|.|-=|=+.+ ++..|.++|+|++..| .++
T Consensus 135 M~V---~pG~~Gq~f~~~~l~ki~~l~~~~~~~~~~~----~I~VDGGIn~e----~i~~l~~aGad~~V~Gss~i 199 (231)
T 3ctl_A 135 MTV---DPGFAGQPFIPEMLDKLAELKAWREREGLEY----EIEVDGSCNQA----TYEKLMAAGADVFIVGTSGL 199 (231)
T ss_dssp ESS---CTTCSSCCCCTTHHHHHHHHHHHHHHHTCCC----EEEEESCCSTT----THHHHHHHTCCEEEECTTTT
T ss_pred EEE---CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC----EEEEECCCCHH----HHHHHHHCCCCEEEECCHHH
T ss_conf 577---6887875325889999999999998349993----69998998899----99999986989999881887
No 97
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=36.43 E-value=22 Score=15.73 Aligned_cols=138 Identities=12% Similarity=0.178 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHH
Q ss_conf 23579999999970775189850544534532589999999999853358689981546234468999874107023320
Q gi|254780676|r 115 PQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNH 194 (329)
Q Consensus 115 ~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nH 194 (329)
++..+| |++..+.|+..+|| |...|-+.+..+.|+.||...|++.|=+ .=-...++...++++|.|.+-=
T Consensus 254 ~~~~er-a~aLv~aG~d~ivi------D~Ahg~s~~v~~~ik~ik~~~~~~~iia---GNVaT~~~~~~L~~aGad~vkV 323 (514)
T 1jcn_A 254 EDDKYR-LDLLTQAGVDVIVL------DSSQGNSVYQIAMVHYIKQKYPHLQVIG---GNVVTAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp TTHHHH-HHHHHHTTCSEEEE------CCSCCCSHHHHHHHHHHHHHCTTCEEEE---EEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHH-HHHHHHCCCCEEEE------ECCCCCHHHHHHHHHHHHHHCCCCEEEE---EEECCHHHHHHHHHHCCCEEEE
T ss_conf 527999-99998538977996------2345127789999999997689971886---3123699999999838888986
Q ss_pred CC-----CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCCC
Q ss_conf 13-----8300027563897035899999999997089167014048876420688999999999669939975022278
Q gi|254780676|r 195 NL-----ETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQP 269 (329)
Q Consensus 195 Ni-----ETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~P 269 (329)
.| =|-+.....-+||.+ --+++-+.++..+-.|+.--|| -+.-+|..++ .+|-|.+-||-+|.=
T Consensus 324 GiG~Gs~CtTr~~~GvG~pq~s--ai~~~a~~~~~~~v~iIADGGi-----~~~GDi~KAl----a~GAd~VMlGs~~Ag 392 (514)
T 1jcn_A 324 GMGCGSICITQEVMACGRPQGT--AVYKVAEYARRFGVPIIADGGI-----QTVGHVVKAL----ALGASTVMMGSLLAA 392 (514)
T ss_dssp CSSCSCCBTTBCCCSCCCCHHH--HHHHHHHHHGGGTCCEEEESCC-----CSHHHHHHHH----HTTCSEEEESTTTTT
T ss_pred ECCCCCCCCCCCCCCCCCCHHH--HHHHHHHHHHHCCCCEEECCCC-----CCCCHHHHHH----HCCCCEEEECCHHCC
T ss_conf 0346766567552234785899--9999999999759928946880-----5346799998----718988996703315
Q ss_pred CCCC
Q ss_conf 6100
Q gi|254780676|r 270 TRKH 273 (329)
Q Consensus 270 s~~h 273 (329)
+..-
T Consensus 393 t~Es 396 (514)
T 1jcn_A 393 TTEA 396 (514)
T ss_dssp STTS
T ss_pred CCCC
T ss_conf 7668
No 98
>2pcq_A Putative dihidrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, structural genomics, NPPSFA; 2.10A {Thermus thermophilus HB8}
Probab=35.38 E-value=23 Score=15.62 Aligned_cols=75 Identities=12% Similarity=0.149 Sum_probs=42.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCC-CCC-CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCC---CHHHHHHHHH
Q ss_conf 88823579999999970775189850544-534-532589999999999853358689981546234---4689998741
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDR-DDL-DDGGAQHFAEVISAIRESAPSTTIEVLTPDFLR---KPHALEKVVS 186 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~R-DDL-~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G---~~~al~~v~~ 186 (329)
.....|-.+.|+.++.+|...++++..-. -.. +++=.+||.+... ..| .+=...|...| ..+.+.++.+
T Consensus 71 ~~s~~~~i~~a~~a~~~G~d~v~~~pP~~~~~~~~~~l~~~~~~ia~----~~p--i~~y~~p~~tg~~~~~~~l~~L~~ 144 (283)
T 2pcq_A 71 EETLPQAEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE----KMP--LFLYHVPQNTKVDLPLEAVEALAP 144 (283)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH----HSC--EEEEECHHHHCCCCCHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH----CCC--CCEECCCCCCCCCCCHHHHHHHHH
T ss_conf 87568899998888864998799558622466668889999999970----288--632306754577876999999972
Q ss_pred CCCHHHH
Q ss_conf 0702332
Q gi|254780676|r 187 AKPDVFN 193 (329)
Q Consensus 187 A~pdV~n 193 (329)
-|.+..
T Consensus 145 -~~~ivg 150 (283)
T 2pcq_A 145 -HPNVLG 150 (283)
T ss_dssp -STTEEE
T ss_pred -HCCCEE
T ss_conf -215233
No 99
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, , PSI-2, protein structure initiative; 1.80A {Bacillus clausii ksm-k16}
Probab=35.16 E-value=23 Score=15.59 Aligned_cols=45 Identities=18% Similarity=0.252 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHH-HHHHHHHHHH
Q ss_conf 82357999999997077518985054453453258-9999999999
Q gi|254780676|r 114 DPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGA-QHFAEVISAI 158 (329)
Q Consensus 114 D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA-~hfa~~I~~I 158 (329)
...|-.+.|+.++++|...+.++..-.--+.+.+. .||.+..+++
T Consensus 91 st~~~i~~a~~a~~~Gad~i~v~pP~~~~~~~~~i~~~f~~ia~a~ 136 (316)
T 3e96_A 91 ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEAL 136 (316)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 4899999998999759999983587567899899999999999983
No 100
>2ka6_B Signal transducer and activator of transcription 1-alpha/beta; CBP/P300, TAZ2, STAT1, transactivation domain, bromodomain, alternative splicing; NMR {Homo sapiens}
Probab=35.04 E-value=16 Score=16.66 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=21.2
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 278610078000238469999999999749624340
Q gi|254780676|r 267 LQPTRKHHKVESFVTPQDFKSYETIAYSKGFLMVSA 302 (329)
Q Consensus 267 L~Ps~~h~pV~ryv~P~eF~~~~~~a~~~Gf~~V~S 302 (329)
||-+.+-+|. +|++|++++++--..-|..|+|
T Consensus 12 LQ~~dNllPM----SPdef~e~~r~Vgp~e~d~vm~ 43 (45)
T 2ka6_B 12 LQTTDNLLPM----SPEEFDEVSRIVGSVEFDSMMN 43 (45)
T ss_dssp CCSTTSCCCS----CHHHHHHHHHHHTTTTGGGTTT
T ss_pred HCCCCCCCCC----CHHHHHHHHHHCCHHHHHHHHH
T ss_conf 2563345778----8889999999707398998985
No 101
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=34.96 E-value=23 Score=15.57 Aligned_cols=59 Identities=20% Similarity=0.202 Sum_probs=42.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 22353522344678998888235799999999707751898505445345325899999999998533586899815
Q gi|254780676|r 95 ICTRACTFCNVATGKPQPLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 95 ~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
-+.+.|..+-+..|.|..++... ..-+||||-..-|..+.+.+.+|.+.+|+..|=+.+
T Consensus 68 ~~~~~adivvitag~~rkpG~t~------------------~~~~R~dl~~~Na~I~~~i~~~i~~~~p~aivlvvs 126 (322)
T 1t2d_A 68 DDLAGADVVIVTAGFTKAPGKSD------------------KEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 126 (322)
T ss_dssp GGGTTCSEEEECCSCSSCTTCCS------------------TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred HHHCCCEEEEECCCCCCCCCCCC------------------CCCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 89658628996243233789765------------------544788987633178899999987119974999806
No 102
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylation, structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=34.85 E-value=23 Score=15.56 Aligned_cols=133 Identities=13% Similarity=0.035 Sum_probs=53.1
Q ss_pred HHHHHHCCC-EEEEECCCCCC------CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHC
Q ss_conf 999970775-18985054453------45325899999999998533586899815462344689998741070233201
Q gi|254780676|r 123 WAVRSMKLS-HVVITSVDRDD------LDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHN 195 (329)
Q Consensus 123 ~av~~l~Lk-~vViTSV~RDD------L~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHN 195 (329)
+++..||.. ..|+|+++=-+ ..+-.+..+.+.++++.+-.+ +.+.--.|.++.+.++.|.+.- .-+.
T Consensus 23 ~t~~alg~~~~~v~TalT~Qn~~~v~~~~~~~~~~~~~ql~~l~~d~~---~~aIkiG~l~s~~~~~~v~~~l-~~~~-- 96 (258)
T 1ub0_A 23 KVFFRFGVYGTSALTLVTAQNTLGVQRVHLLPPEVVYAQIESVAQDFP---LHAAKTGALGDAAIVEAVAEAV-RRFG-- 96 (258)
T ss_dssp HHHHHTTCEEEEEEEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSC---CSEEEECCCCSHHHHHHHHHHH-HHTT--
T ss_pred HHHHHCCCCCCEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCC---CCEEEECCCCCCHHHHHHHHHH-HHCC--
T ss_conf 999984991034636999886866699997898999999998513888---5247884556513999999999-9659--
Q ss_pred CCCCCCCCCCCCC-CCHHHHHHHHHHHHHHC-C--CEEEEC----CCEEEEE-EECHHHHHHHHHHHHHCCCCEEE
Q ss_conf 3830002756389-70358999999999970-8--916701----4048876-42068899999999966993997
Q gi|254780676|r 196 LETVASNYLMVRP-GARYFHSLRLLQRVKEL-D--PLIFTK----SGIMLGL-GETRNEILQLMDDLRTADVDFLT 262 (329)
Q Consensus 196 iETV~rLy~~VRp-~a~Y~rSL~vL~~aK~~-~--~~i~TK----SGlMvGL-GEt~eEi~e~l~DLr~~gvdilT 262 (329)
.+-.=+.|.+.+ ...|.-.-+.+...++. - .++.|= -.++.|. =++.+|+.+..+.|.+.|+.-+-
T Consensus 97 -~~~~v~dpv~~~~~~~~~~~~~~~~~~~~~L~p~adiiTPN~~Ea~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vl 171 (258)
T 1ub0_A 97 -VRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLGRPIRTLKEAEEAAKALLALGPKAVL 171 (258)
T ss_dssp -CCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHCSCCCSHHHHHHHHHHHHTTSCSCEE
T ss_pred -CCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEE
T ss_conf -977666563356789857898999999987256745734999999998588989989999999999972896599
No 103
>3nn1_A Chlorite dismutase; ferredoxin like fold, chlorite dismutation, periplasmatic, oxidoreductase; HET: HEM; 1.85A {Candidatus nitrospira defluvii} PDB: 3nn2_A* 3nn4_A* 3nn3_A*
Probab=34.83 E-value=17 Score=16.58 Aligned_cols=81 Identities=12% Similarity=0.148 Sum_probs=40.1
Q ss_pred CCEEE-EEEECHHHHHHHHHHHHHCCCCEEECCHHCCCCCCCCCCCC---CCCHHHHHHHHHHHHHCC-----CCEEECC
Q ss_conf 40488-76420688999999999669939975022278610078000---238469999999999749-----6243404
Q gi|254780676|r 233 SGIML-GLGETRNEILQLMDDLRTADVDFLTMGQYLQPTRKHHKVES---FVTPQDFKSYETIAYSKG-----FLMVSAS 303 (329)
Q Consensus 233 SGlMv-GLGEt~eEi~e~l~DLr~~gvdilTiGQYL~Ps~~h~pV~r---yv~P~eF~~~~~~a~~~G-----f~~V~Sg 303 (329)
+-||+ =+|++.+++-++..+|+.. .+|.||.|+...+.|.+ |+...+ .....+...+ -+++.-=
T Consensus 68 aDlm~w~~~~~~~~lq~~~~~l~~t-----~lg~~l~~~~s~~s~t~~s~Y~~~~~--~~~~~~~~~~~~~~~~~y~~~Y 140 (241)
T 3nn1_A 68 ADLMFRVHARTLSDTQQFLSAFMGT-----RLGRHLTSGGLLHGVSKKPTYVAGFP--ESMKTELQVNGESGSRPYAIVI 140 (241)
T ss_dssp CCEEEEEEESSHHHHHHHHHHHHTS-----TTGGGEEEEEEEEEECCCCSSGGGSC--HHHHHHTTCCCCCCSSCEEEEE
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHC-----CCCCCCCCCHHEEECCCCCCCCCCCC--HHHHHHHCCCCCCCCCCEEEEE
T ss_conf 7689999589999999999999746-----36554521121033012630134565--3454330145789997779999
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 830010318999999999985
Q gi|254780676|r 304 PLTRSSYHAGDDFLRLKNNRR 324 (329)
Q Consensus 304 PlVRSSY~A~e~~~~~~~~~~ 324 (329)
|++||- +-|..-.+.|+
T Consensus 141 Pm~Ks~----eWYlL~~eeR~ 157 (241)
T 3nn1_A 141 PIKKDA----EWWALDQEART 157 (241)
T ss_dssp EEEECH----HHHHSCHHHHH
T ss_pred ECCCCC----HHHCCCHHHHH
T ss_conf 778882----25459999999
No 104
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=34.64 E-value=23 Score=15.54 Aligned_cols=25 Identities=8% Similarity=0.069 Sum_probs=14.6
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 0179986689999999974982365
Q gi|254780676|r 46 VRAPVSSGYKETYNILRSRNLTTVC 70 (329)
Q Consensus 46 ~~~p~~~~~~~~~~~l~~~~L~TVC 70 (329)
-++.+.+.+.++-+...+.++.-|.
T Consensus 59 ~r~Gt~~dlk~LV~~aH~~GI~Vil 83 (448)
T 1g94_A 59 SRGGNRAQFIDMVNRCSAAGVDIYV 83 (448)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 9999999999999999987999999
No 105
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=34.24 E-value=24 Score=15.49 Aligned_cols=85 Identities=25% Similarity=0.360 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHH-HCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHCCCE
Q ss_conf 9999999985335868998154623446899987410702332-013830002756389703589999999-99970891
Q gi|254780676|r 151 FAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFN-HNLETVASNYLMVRPGARYFHSLRLLQ-RVKELDPL 228 (329)
Q Consensus 151 fa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~n-HNiETV~rLy~~VRp~a~Y~rSL~vL~-~aK~~~~~ 228 (329)
+...+++++...|+..|||.+.. .+.++..+++++|++= -|+. ++.++ .++..++.
T Consensus 218 i~~a~~~~~~~~p~~~IeVEv~~----l~e~~ea~~agaDiImLDn~s------------------~e~lk~aV~~~~~~ 275 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEVETET----LAELEEAISAGADIIMLDNFS------------------LEMMREAVKINAGR 275 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEEEESS----HHHHHHHHHTTCSEEEEESCC------------------HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHCCCCEEEEECCC----HHHHHHHHHCCCCEEEECCCC------------------HHHHHHHHHHHCCC
T ss_conf 89999999974899779993286----899999985388889865899------------------99999999975897
Q ss_pred EE-ECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHH
Q ss_conf 67-014048876420688999999999669939975022
Q gi|254780676|r 229 IF-TKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQY 266 (329)
Q Consensus 229 i~-TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQY 266 (329)
+. --||. =+.+ .+.+..+.|||++.+|-.
T Consensus 276 v~lEaSGG-----I~~~----ni~~yA~tGVD~IsvGal 305 (320)
T 3paj_A 276 AALENSGN-----ITLD----NLKECAETGVDYISVGAL 305 (320)
T ss_dssp SEEEEESS-----CCHH----HHHHHHTTTCSEEECTHH
T ss_pred EEEEEECC-----CCHH----HHHHHHHCCCCEEECCHH
T ss_conf 79999789-----9899----999999819899987976
No 106
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=33.84 E-value=24 Score=15.45 Aligned_cols=52 Identities=15% Similarity=0.301 Sum_probs=22.9
Q ss_pred CCHHHHHHHHHHHHHHCCC--EEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 8823579999999970775--189850544534532589999999999853358689
Q gi|254780676|r 113 LDPQEPENISWAVRSMKLS--HVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTI 167 (329)
Q Consensus 113 ~D~~EP~rvA~av~~l~Lk--~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~I 167 (329)
++.+....+.+++...++. -+|.|.--. .-.-+...++.++.++..+|++.+
T Consensus 57 ~~~~~i~~~~~~~~~~~~~~~~aIk~G~l~---s~~~i~~i~~~l~~~~~~~~~~~v 110 (312)
T 2yxt_A 57 LNSDELQELYEGLRLNNMNKYDYVLTGYTR---DKSFLAMVVDIVQELKQQNPRLVY 110 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCSEEEECCCC---CHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEECCCC---CHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 999999999999984577768989988879---989999999999986301898629
No 107
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, cytoplasm; 2.00A {Neisseria meningitidis serogroup B}
Probab=33.63 E-value=24 Score=15.43 Aligned_cols=77 Identities=12% Similarity=0.089 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCC---CHHHHHHHHHCC
Q ss_conf 88823579999999970775189850544534532589999999999853358689981546234---468999874107
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLR---KPHALEKVVSAK 188 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G---~~~al~~v~~A~ 188 (329)
.....|-.+.|+.++.+|...+.++..----+.|.+.-.|.+.|. +..+--.+=-..|+..| ..+.+.++.+ -
T Consensus 85 ~~s~~~~i~~a~~a~~~Gad~v~v~pP~~~~~s~~~i~~~~~~i~---~a~~~pi~lYn~P~~~g~~l~~e~l~~L~~-~ 160 (297)
T 3flu_A 85 ANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIA---EATSIPMIIYNVPGRTVVSMTNDTILRLAE-I 160 (297)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHH---HHCCSCEEEEECHHHHSSCCCHHHHHHHTT-S
T ss_pred CCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHH---HCCCCCEEEEECCCCCCCCCCHHHHHHHHC-C
T ss_conf 563999999999999829987562588788989999999999998---547998899978864477899999999865-8
Q ss_pred CHHH
Q ss_conf 0233
Q gi|254780676|r 189 PDVF 192 (329)
Q Consensus 189 pdV~ 192 (329)
|.|.
T Consensus 161 pni~ 164 (297)
T 3flu_A 161 PNIV 164 (297)
T ss_dssp TTEE
T ss_pred CCEE
T ss_conf 9988
No 108
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=33.28 E-value=24 Score=15.39 Aligned_cols=23 Identities=17% Similarity=0.124 Sum_probs=12.9
Q ss_pred HHHHHHHHHHCCCC-EEECCHHCC
Q ss_conf 99999999966993-997502227
Q gi|254780676|r 246 ILQLMDDLRTADVD-FLTMGQYLQ 268 (329)
Q Consensus 246 i~e~l~DLr~~gvd-ilTiGQYL~ 268 (329)
.++.++.|...|++ ++|=||...
T Consensus 135 ~~~~l~~l~~lgv~~iltsGg~~~ 158 (224)
T 2bdq_A 135 QKKSIDQLVALGFTRILLHGSSNG 158 (224)
T ss_dssp HHHHHHHHHHTTCCEEEECSCSSC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 999999999669853244588654
No 109
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenase; HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=32.75 E-value=25 Score=15.33 Aligned_cols=43 Identities=19% Similarity=0.057 Sum_probs=34.2
Q ss_pred CCCEEEEEC-----------CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 775189850-----------5445345325899999999998533586899815
Q gi|254780676|r 129 KLSHVVITS-----------VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 129 ~Lk~vViTS-----------V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
+-..||||. -+|+||-..-+..|.+....|++.+|+..|=+.+
T Consensus 69 daDivvitag~pr~~~~kpg~~R~dll~~N~~I~~~i~~~i~~~~p~~ivivvs 122 (309)
T 1hyh_A 69 DADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (309)
T ss_dssp TCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 886689961013334579984289998766778899999875049832999817
No 110
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=32.71 E-value=25 Score=15.33 Aligned_cols=170 Identities=19% Similarity=0.244 Sum_probs=112.2
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHH
Q ss_conf 88823579999999970775189850544534532589999999999853358689981546234468999874107023
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDV 191 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV 191 (329)
..|+++-..++++...-|++.+=||--+ + ...+.|+++++..|++.|-+=+= =+.+.++..+++|.+-
T Consensus 24 ~~~~~~a~~i~~al~~~Gi~~iEItl~t----p-----~a~~~i~~l~~~~p~~~iGaGTV---~~~e~~~~a~~aGa~F 91 (214)
T 1wbh_A 24 VKKLEHAVPMAKALVAGGVRVLNVTLRT----E-----CAVDAIRAIAKEVPEAIVGAGTV---LNPQQLAEVTEAGAQF 91 (214)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEESCS----T-----THHHHHHHHHHHCTTSEEEEESC---CSHHHHHHHHHHTCSC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCC----H-----HHHHHHHHHHHHCCCCEEEECCC---CCHHHHHHHHHCCCCE
T ss_conf 8999999999999998799889993798----6-----79999999998789967952454---5368999999819989
Q ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEE------CC-
Q ss_conf 32013830002756389703589999999999708916701404887642068899999999966993997------50-
Q gi|254780676|r 192 FNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLT------MG- 264 (329)
Q Consensus 192 ~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilT------iG- 264 (329)
+ |-|.- +-++++++++.+--.. -|. .|..|+.+++ +.|++++- +|
T Consensus 92 i-------------vsP~~----~~~v~~~a~~~~i~~i--PGv-----~TpsEi~~A~----~~G~~~vK~FPA~~~Gg 143 (214)
T 1wbh_A 92 A-------------ISPGL----TEPLLKAATEGTIPLI--PGI-----STVSELMLGM----DYGLKEFKFFPAEANGG 143 (214)
T ss_dssp E-------------EESSC----CHHHHHHHHHSSSCEE--EEE-----SSHHHHHHHH----HTTCCEEEETTTTTTTH
T ss_pred E-------------ECCCC----CHHHHHHHHHCCCCCC--CCC-----CCHHHHHHHH----HCCCCEEEECHHHHCCH
T ss_conf 9-------------85899----9999999985499753--784-----9889999999----85999599760242080
Q ss_pred -HHCC------CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -2227------861007800023846999999999974962434048300103189999999999854
Q gi|254780676|r 265 -QYLQ------PTRKHHKVESFVTPQDFKSYETIAYSKGFLMVSASPLTRSSYHAGDDFLRLKNNRRQ 325 (329)
Q Consensus 265 -QYL~------Ps~~h~pV~ryv~P~eF~~~~~~a~~~Gf~~V~SgPlVRSSY~A~e~~~~~~~~~~~ 325 (329)
.|++ |..+-+|+- =++++.+.+|-+.+. ...+..+-|+.-..-+...|..+..+-++
T Consensus 144 ~~~ik~l~~p~p~i~~~ptG-GV~~~n~~~~l~ag~---v~~~~Gs~l~~~~~i~~~d~~~i~~~a~~ 207 (214)
T 1wbh_A 144 VKALQAIAGPFSQVRFCPTG-GISPANYRDYLALKS---VLCIGGSWLVPADALEAGDYDRITKLARE 207 (214)
T ss_dssp HHHHHHHHTTCTTCEEEEBS-SCCTTTHHHHHTSTT---BSCEEEGGGSCHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEC-CCCHHHHHHHHHCCC---EEEEECHHHCCHHHHHCCCHHHHHHHHHH
T ss_conf 98999874213377076547-988889999995899---79998835379777745799999999999
No 111
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=32.40 E-value=25 Score=15.29 Aligned_cols=87 Identities=13% Similarity=0.207 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHH-HCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHCCCE
Q ss_conf 9999999985335868998154623446899987410702332-01383000275638970358999999999-970891
Q gi|254780676|r 151 FAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFN-HNLETVASNYLMVRPGARYFHSLRLLQRV-KELDPL 228 (329)
Q Consensus 151 fa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~n-HNiETV~rLy~~VRp~a~Y~rSL~vL~~a-K~~~~~ 228 (329)
+.+.|+.+|+..|...|||-+.. .+.+...+.+++|++= -|+. .+.++.+ +...+.
T Consensus 196 i~~ai~~~~~~~~~~~I~VEv~~----~~e~~~a~~~g~d~I~LDn~s------------------~~~~~~~v~~~~~~ 253 (298)
T 3gnn_A 196 VGEALDAAFALNAEVPVQIEVET----LDQLRTALAHGARSVLLDNFT------------------LDMMRDAVRVTEGR 253 (298)
T ss_dssp HHHHHHHHHHHC--CCCEEEESS----HHHHHHHHHTTCEEEEEESCC------------------HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHCCCCCEEEECCC----HHHHHHHHHCCCCEEEECCCC------------------HHHHHHHHHHHCCC
T ss_conf 78887767764368616785188----999999996598778545899------------------99999999985896
Q ss_pred EEE-CCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCC
Q ss_conf 670-1404887642068899999999966993997502227
Q gi|254780676|r 229 IFT-KSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQ 268 (329)
Q Consensus 229 i~T-KSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~ 268 (329)
+.+ -|| |=+.+ .+.+..+.|||++.+|-+-.
T Consensus 254 ~~ieaSG-----GI~~~----ni~~yA~~GVD~Is~G~lt~ 285 (298)
T 3gnn_A 254 AVLEVSG-----GVNFD----TVRAIAETGVDRISIGALTK 285 (298)
T ss_dssp EEEEEES-----SCSTT----THHHHHHTTCSEEECGGGGT
T ss_pred EEEEEEC-----CCCHH----HHHHHHHCCCCEEECCHHHC
T ss_conf 8999978-----99999----99999974999998697655
No 112
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=31.99 E-value=26 Score=15.25 Aligned_cols=45 Identities=20% Similarity=0.135 Sum_probs=25.1
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCC-CCCCCCCH-HHHHHHHHHH
Q ss_conf 882357999999997077518985054-45345325-8999999999
Q gi|254780676|r 113 LDPQEPENISWAVRSMKLSHVVITSVD-RDDLDDGG-AQHFAEVISA 157 (329)
Q Consensus 113 ~D~~EP~rvA~av~~l~Lk~vViTSV~-RDDL~DgG-A~hfa~~I~~ 157 (329)
.+..|-.+.|+.++.+|..-+++...- ---+.|.| ..||....++
T Consensus 74 ~st~~~i~~a~~a~~~G~d~i~~~pp~~~~~~~~~~i~~~~~~ia~~ 120 (286)
T 2r91_A 74 LNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSA 120 (286)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 32589999999999869998986698523468889999999987624
No 113
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=31.78 E-value=13 Score=17.44 Aligned_cols=10 Identities=20% Similarity=0.129 Sum_probs=3.3
Q ss_pred HHHHHHHCCC
Q ss_conf 9999997496
Q gi|254780676|r 288 YETIAYSKGF 297 (329)
Q Consensus 288 ~~~~a~~~Gf 297 (329)
-.++|.++||
T Consensus 701 a~~~a~~iGy 710 (1073)
T 1a9x_A 701 AVEKAKEIGY 710 (1073)
T ss_dssp HHHHHHHHCS
T ss_pred HHHHHHHCCC
T ss_conf 9999986499
No 114
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=31.62 E-value=26 Score=15.20 Aligned_cols=34 Identities=15% Similarity=0.249 Sum_probs=29.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 5445345325899999999998533586899815
Q gi|254780676|r 138 VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 138 V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
-+|+||-..-|..|.+...+|.+.+|+..|=+.+
T Consensus 91 ~~R~dll~~Na~I~~~~~~~i~~~~p~~iiivvs 124 (319)
T 1lld_A 91 QSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 124 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 9878986543899999999987229981899647
No 115
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=31.62 E-value=26 Score=15.20 Aligned_cols=43 Identities=21% Similarity=0.275 Sum_probs=34.7
Q ss_pred CCCEEEEE-------CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 77518985-------05445345325899999999998533586899815
Q gi|254780676|r 129 KLSHVVIT-------SVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 129 ~Lk~vViT-------SV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
+-..|||| .-+|+||-..-|..|.+.+.+|.+.+|+..|=+.+
T Consensus 67 ~adivvitag~~~kpg~~R~dll~~Na~I~~~i~~~i~~~~p~~~vlvvs 116 (319)
T 1a5z_A 67 GSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (319)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 99999986899899999878987622678888999998429983899934
No 116
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=31.43 E-value=26 Score=15.18 Aligned_cols=34 Identities=32% Similarity=0.414 Sum_probs=29.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 5445345325899999999998533586899815
Q gi|254780676|r 138 VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 138 V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
-+|+||-..-|..+.+.+.+|.+.+|+..+=+.+
T Consensus 85 ~~R~dll~~N~~i~~~~~~~i~~~~p~~ivivvs 118 (294)
T 1oju_A 85 MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 8746665455799999999998419980999527
No 117
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=30.00 E-value=28 Score=15.02 Aligned_cols=13 Identities=15% Similarity=0.143 Sum_probs=5.1
Q ss_pred HHHHHHCCCEEEE
Q ss_conf 9999707751898
Q gi|254780676|r 123 WAVRSMKLSHVVI 135 (329)
Q Consensus 123 ~av~~l~Lk~vVi 135 (329)
+.++.+|..++=|
T Consensus 92 ~~~~~lGf~~IEi 104 (251)
T 1qwg_A 92 NECEKLGFEAVEI 104 (251)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHHCCCCEEEE
T ss_conf 9999859988997
No 118
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=29.77 E-value=28 Score=14.99 Aligned_cols=43 Identities=23% Similarity=0.177 Sum_probs=35.2
Q ss_pred CCCEEEEE-------CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 77518985-------05445345325899999999998533586899815
Q gi|254780676|r 129 KLSHVVIT-------SVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 129 ~Lk~vViT-------SV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
+-..|||| .-+|+||-..-|..|.+.+.+|.+.+|+..|=+.+
T Consensus 74 ~advvvitag~~rk~g~~R~dll~~Na~I~~~~~~~i~~~~p~~iv~vvs 123 (318)
T 1y6j_A 74 DCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 123 (318)
T ss_dssp TCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 88889972898899999877887656689999987764236772899807
No 119
>2zkr_o 60S ribosomal protein L18; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=29.60 E-value=16 Score=16.77 Aligned_cols=93 Identities=18% Similarity=0.217 Sum_probs=58.8
Q ss_pred EEECCCEEEEEEECHH--HH--------HHHHHHHHHCCCCEEECCHHCC--CCCCCCCCCCCCCH-HHHHHHHHHHHHC
Q ss_conf 6701404887642068--89--------9999999966993997502227--86100780002384-6999999999974
Q gi|254780676|r 229 IFTKSGIMLGLGETRN--EI--------LQLMDDLRTADVDFLTMGQYLQ--PTRKHHKVESFVTP-QDFKSYETIAYSK 295 (329)
Q Consensus 229 i~TKSGlMvGLGEt~e--Ei--------~e~l~DLr~~gvdilTiGQYL~--Ps~~h~pV~ryv~P-~eF~~~~~~a~~~ 295 (329)
+..--|-.+|-|.-.+ .+ ..+-.-+.++|..++||-|... |+-+..-+-+ -| ..=+.++.+|..-
T Consensus 79 ~vVVvGkVl~dgrl~~vPKltV~AL~fS~~Ar~kI~~aGGk~lT~dqLa~~~P~G~n~vlLr--g~~~~Rea~khfG~ap 156 (188)
T 2zkr_o 79 TAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLS--GPRKGREVYRHFGKAP 156 (188)
T ss_dssp EEEEEEEEECSSCCCCCSSCCEEEEEECHHHHHHHHHHSSCEEEHHHHHHHCTTCCSEEEEC------------------
T ss_pred EEEEECCCCCCCEEECCCCEEEEEEEECHHHHHHHHHCCCEEEEHHHHHHHCCCCCCEEEEE--CCCCHHHHHHCCCCCC
T ss_conf 48886126487102036754899997137899999975987976999998789999739974--6841267874267899
Q ss_pred CCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9624340483001031899999999998541
Q gi|254780676|r 296 GFLMVSASPLTRSSYHAGDDFLRLKNNRRQH 326 (329)
Q Consensus 296 Gf~~V~SgPlVRSSY~A~e~~~~~~~~~~~~ 326 (329)
|-.+-..-|+|||- +.-|++++..|...
T Consensus 157 g~p~s~t~Pyv~sk---grk~e~argrr~s~ 184 (188)
T 2zkr_o 157 GTPHSHTKPYVRSK---GRKFERARGRRASR 184 (188)
T ss_dssp -------------------------------
T ss_pred CCCCCCCCCCEECC---CCCHHHHCCCCCCC
T ss_conf 99988888844145---43234421653234
No 120
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica}
Probab=28.48 E-value=29 Score=14.84 Aligned_cols=177 Identities=18% Similarity=0.225 Sum_probs=114.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHH
Q ss_conf 88823579999999970775189850544534532589999999999853358689981546234468999874107023
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDV 191 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV 191 (329)
..|+++-..++++...-|++.+=||--+ + ...+.|+++++..|++.|-+=+= =+.+.++..+++|.+-
T Consensus 21 ~~~~~~~~~i~~aL~~~Gi~~iEitl~~----~-----~a~~~i~~l~~~~p~~~vGaGTV---~~~~~~~~a~~aGA~F 88 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAGGVHLLEVTLRT----E-----AGLAAISAIKKAVPEAIVGAGTV---CTADDFQKAIDAGAQF 88 (217)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEETTS----T-----THHHHHHHHHHHCTTSEEEEECC---CSHHHHHHHHHHTCSE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCC----C-----HHHHHHHHHHHHCCCCEEEEEEC---CCHHHHHHHHHHCCCE
T ss_conf 8999999999999998799889996899----0-----69999999998689975999962---4279999999727888
Q ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE-ECCCEEEEEEECHHHHHHHHHHHHHCCCCEEE------CC
Q ss_conf 320138300027563897035899999999997089167-01404887642068899999999966993997------50
Q gi|254780676|r 192 FNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIF-TKSGIMLGLGETRNEILQLMDDLRTADVDFLT------MG 264 (329)
Q Consensus 192 ~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~-TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilT------iG 264 (329)
+ |-|..+ -++++++++.+ ++ ....+.+==.-|..|+.+++ +.|++++- +|
T Consensus 89 i-------------vsP~~~----~~v~~~a~~~~--ip~~~~~~~iPG~~TptEi~~A~----~~G~~~vK~FPA~~~g 145 (217)
T 3lab_A 89 I-------------VSPGLT----PELIEKAKQVK--LDGQWQGVFLPGVATASEVMIAA----QAGITQLKCFPASAIG 145 (217)
T ss_dssp E-------------EESSCC----HHHHHHHHHHH--HHCSCCCEEEEEECSHHHHHHHH----HTTCCEEEETTTTTTT
T ss_pred E-------------ECCCCC----HHHHHHHHHCC--CCCCCCCCCCCCCCCHHHHHHHH----HCCCCEEEECCCCCCC
T ss_conf 7-------------768899----99999999849--86445754527858867999999----7699959964011237
Q ss_pred --HHCCCCCCCCCCCCC-----CCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf --222786100780002-----38469999999999749624340483001031899999999998541
Q gi|254780676|r 265 --QYLQPTRKHHKVESF-----VTPQDFKSYETIAYSKGFLMVSASPLTRSSYHAGDDFLRLKNNRRQH 326 (329)
Q Consensus 265 --QYL~Ps~~h~pV~ry-----v~P~eF~~~~~~a~~~Gf~~V~SgPlVRSSY~A~e~~~~~~~~~~~~ 326 (329)
.|++--+.-+|=.+| |+++.+.+|-+.+. ...+..+.|+.-.+-+...|.++.++.++-
T Consensus 146 g~~~lk~l~~p~p~~~~~ptGGV~~~n~~~yl~~g~---~~~~~Gs~l~~~~~i~~~d~~~i~~~a~~~ 211 (217)
T 3lab_A 146 GAKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLPN---VICAGGSWLTESKLLIEGDWNEVTRRASEI 211 (217)
T ss_dssp HHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHSTT---BCCEEESGGGCHHHHHHTCHHHHHHHHHHS
T ss_pred CHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCC---EEEEECCHHCCHHHHHCCCHHHHHHHHHHH
T ss_conf 899998620358998287337989899999996898---299988310696565228999999999999
No 121
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=28.45 E-value=29 Score=14.84 Aligned_cols=43 Identities=26% Similarity=0.305 Sum_probs=34.7
Q ss_pred CCCEEEEEC-------CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 775189850-------5445345325899999999998533586899815
Q gi|254780676|r 129 KLSHVVITS-------VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 129 ~Lk~vViTS-------V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
+-..||||. -+|+||-..-|..|.+.+..|.+.+|+..|-+.+
T Consensus 70 dadivvitag~~~kpg~~R~dll~~Na~i~k~i~~~i~~~~p~~~v~vvt 119 (309)
T 1ur5_A 70 NSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp TCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 99999986898899998878887767999999987876329980999946
No 122
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=28.19 E-value=30 Score=14.81 Aligned_cols=43 Identities=26% Similarity=0.227 Sum_probs=34.9
Q ss_pred CCCEEEEE-------CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 77518985-------05445345325899999999998533586899815
Q gi|254780676|r 129 KLSHVVIT-------SVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 129 ~Lk~vViT-------SV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
+-..|||| .-+|+||-..-|..+.+...+|.+.+|+..|=+.+
T Consensus 74 ~aDivvitag~~~k~g~~R~dll~~Na~I~~~~~~~i~~~~p~~~vivvs 123 (316)
T 1ldn_A 74 DADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (316)
T ss_dssp TCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 89999984798899898868998746047899999986338972999934
No 123
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=28.17 E-value=30 Score=14.81 Aligned_cols=180 Identities=16% Similarity=0.195 Sum_probs=89.9
Q ss_pred CCCEEEEEC-------CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC-C-C---------------CC-----C---
Q ss_conf 775189850-------5445345325899999999998533586899815-4-6---------------23-----4---
Q gi|254780676|r 129 KLSHVVITS-------VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT-P-D---------------FL-----R--- 176 (329)
Q Consensus 129 ~Lk~vViTS-------V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi-P-D---------------f~-----G--- 176 (329)
+-..||||. -+|+||-..-+..|.+.+.+|++.+|+..|=+.+ | | |. |
T Consensus 76 daDiVVitaG~~~k~g~sR~dll~~N~~I~~~i~~~i~~~~~~~iiivVtNPvD~~t~~a~~~~k~~~~~p~~ri~g~t~ 155 (326)
T 1smk_A 76 GMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTM 155 (326)
T ss_dssp TCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHHHHTCCCTTSEEECCH
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHEEEEEH
T ss_conf 99999985898999899788999877789999999986316761899973861378999999998769998351787643
Q ss_pred -CHHHHHHHHHCCCHH---------H-HHCCCCCCCCCCCCCCCCHHHHH--HHHHHHHHHCCCEEE-EC---CCEEEEE
Q ss_conf -468999874107023---------3-20138300027563897035899--999999997089167-01---4048876
Q gi|254780676|r 177 -KPHALEKVVSAKPDV---------F-NHNLETVASNYLMVRPGARYFHS--LRLLQRVKELDPLIF-TK---SGIMLGL 239 (329)
Q Consensus 177 -~~~al~~v~~A~pdV---------~-nHNiETV~rLy~~VRp~a~Y~rS--L~vL~~aK~~~~~i~-TK---SGlMvGL 239 (329)
+...++.++.....| + .|.=+|+--+...+.....+... -++...++..+..+. .| ..-..|.
T Consensus 156 LDs~R~r~~ia~~l~v~~~~V~~~ViGeHg~~~~vp~~S~~~~~~~~~~~~~~~i~~~~~~~g~~ii~~k~~~g~t~~~~ 235 (326)
T 1smk_A 156 LDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSM 235 (326)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCBCCEEECSSGGGEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHTTTSCCCCHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 36689999999996939788466699627876065105423547766477889989999988899985641788615679
Q ss_pred EECHHHHHHH-HHHHHHC-CCCEEECCHHCC--------CCC---C-CCCCCCC--CCHHHHHHHHHHHHHCCCCEEECC
Q ss_conf 4206889999-9999966-993997502227--------861---0-0780002--384699999999997496243404
Q gi|254780676|r 240 GETRNEILQL-MDDLRTA-DVDFLTMGQYLQ--------PTR---K-HHKVESF--VTPQDFKSYETIAYSKGFLMVSAS 303 (329)
Q Consensus 240 GEt~eEi~e~-l~DLr~~-gvdilTiGQYL~--------Ps~---~-h~pV~ry--v~P~eF~~~~~~a~~~Gf~~V~Sg 303 (329)
+..--++.+. +.|++.. .+-....++|=- |.. + -..|.+. .+++|-+.+++-+..+
T Consensus 236 a~a~~~~~~ai~~~~~~~~~v~~~~~~~~~~~~~~~~s~P~~ig~~Gv~~ivel~~L~~~E~~~l~~Sa~~l-------- 307 (326)
T 1smk_A 236 AYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKEL-------- 307 (326)
T ss_dssp HHHHHHHHHHHHHHHHTCSCEEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHH--------
T ss_conf 999999999996066897678988853678775279999819948933998348999999999999999999--------
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 8300103189999999
Q gi|254780676|r 304 PLTRSSYHAGDDFLRL 319 (329)
Q Consensus 304 PlVRSSY~A~e~~~~~ 319 (329)
+.++.-++.|.+.
T Consensus 308 ---~~~I~~~~~f~k~ 320 (326)
T 1smk_A 308 ---AGSIEKGVSFIRS 320 (326)
T ss_dssp ---HHHHHHHHHHHCC
T ss_pred ---HHHHHHHHHHHHC
T ss_conf ---9999999999851
No 124
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=28.01 E-value=30 Score=14.79 Aligned_cols=87 Identities=15% Similarity=0.206 Sum_probs=44.4
Q ss_pred CCCCCCHHHHHHHHH-------HHHHHCCCEEEEECC--------------CCCCCCC----CHHHHHHHHHHHHHHHCC
Q ss_conf 998888235799999-------999707751898505--------------4453453----258999999999985335
Q gi|254780676|r 109 KPQPLDPQEPENISW-------AVRSMKLSHVVITSV--------------DRDDLDD----GGAQHFAEVISAIRESAP 163 (329)
Q Consensus 109 ~P~~~D~~EP~rvA~-------av~~l~Lk~vViTSV--------------~RDDL~D----gGA~hfa~~I~~Ir~~~P 163 (329)
.|.++..+|-+.+-+ -+++-|..-|-|-+- .|+|-=- .-+....++|++||+..+
T Consensus 130 ~p~~mt~~eI~~ii~~f~~AA~~A~~AGfDGVEiH~ahGyLl~qFlSp~~N~RtDeYGGs~enR~Rf~~Eii~aVr~~~~ 209 (340)
T 3gr7_A 130 TPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWD 209 (340)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 88679999999999999999999998499999983006699999449877987764578756789999999999998728
Q ss_pred C-CEEEEECCCCCC-------CHHHHHHHHHCCCHHHHHC
Q ss_conf 8-689981546234-------4689998741070233201
Q gi|254780676|r 164 S-TTIEVLTPDFLR-------KPHALEKVVSAKPDVFNHN 195 (329)
Q Consensus 164 ~-~~IEvLiPDf~G-------~~~al~~v~~A~pdV~nHN 195 (329)
. ..+-+-..|+.. -.+..+.+.+++.|.++-.
T Consensus 210 ~~~~~~~~~~d~~~~g~~~~~~~~~~~~l~~~g~d~~~~~ 249 (340)
T 3gr7_A 210 GPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp SCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 8761020344445898878999999999986475536432
No 125
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 2.71A {Bacillus subtilis subsp}
Probab=27.88 E-value=30 Score=14.77 Aligned_cols=143 Identities=12% Similarity=0.110 Sum_probs=63.9
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC--CCCEEEEECCCCCCCHHHHHHHHHCCC
Q ss_conf 888235799999999707751898505445345325899999999998533--586899815462344689998741070
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESA--PSTTIEVLTPDFLRKPHALEKVVSAKP 189 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~--P~~~IEvLiPDf~G~~~al~~v~~A~p 189 (329)
....++-..+|++..++|.+++=+++....... ..++......+... ++..+-.+.|. ...++....++.
T Consensus 24 ~~s~~~k~~i~~~L~~~Gv~~IEvG~~~~~~~~----~~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 95 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWI----PALRDAIDVAKGIDREKGVTYAALVPN----QRGLENALEGGI 95 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTC----GGGTTHHHHHHHSCCCTTCEEEEECCS----HHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC----HHHHHHHHHHHCCCCCCCCEEEEECCC----CHHHHHHHHCCC
T ss_conf 889999999999999819998995787584417----778889999963463556345420146----778999983799
Q ss_pred HHHHHCCCCCCCCCCC--CCC-CCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEE------CHHHHHHHHHHHHHCCCCE
Q ss_conf 2332013830002756--389-703589999999999708916701404887642------0688999999999669939
Q gi|254780676|r 190 DVFNHNLETVASNYLM--VRP-GARYFHSLRLLQRVKELDPLIFTKSGIMLGLGE------TRNEILQLMDDLRTADVDF 260 (329)
Q Consensus 190 dV~nHNiETV~rLy~~--VRp-~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGE------t~eEi~e~l~DLr~~gvdi 260 (329)
..++.-+......... .+. ...-+...+.++.+++.+.. ++.+++.-.|- +.+++.+..+.+.+.|+|.
T Consensus 96 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~ 173 (307)
T 1ydo_A 96 NEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLT--TRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISE 173 (307)
T ss_dssp SEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCE--EEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSC
T ss_pred CEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCE--EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 858898764377776741135999987679999999853853--665442226765566531657999999999729806
Q ss_pred EECC
Q ss_conf 9750
Q gi|254780676|r 261 LTMG 264 (329)
Q Consensus 261 lTiG 264 (329)
+.|.
T Consensus 174 i~l~ 177 (307)
T 1ydo_A 174 LSLG 177 (307)
T ss_dssp EEEE
T ss_pred EEEC
T ss_conf 7604
No 126
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=27.87 E-value=30 Score=14.77 Aligned_cols=43 Identities=26% Similarity=0.328 Sum_probs=33.6
Q ss_pred HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 70775189850544534532589999999999853358689981546234
Q gi|254780676|r 127 SMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLR 176 (329)
Q Consensus 127 ~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G 176 (329)
..|+.. +||+ +..|--..+|+++-+.|+..|++++++.+| |.+
T Consensus 41 ~~G~~~-fisg-----~a~G~D~~aAe~vl~lk~~yp~i~L~~vlP-f~~ 83 (181)
T 2nx2_A 41 DEGLEW-ILIS-----GQLGVELWAAEAAYDLQEEYPDLKVAVITP-FYE 83 (181)
T ss_dssp TTTCCE-EEEC-----CCTTHHHHHHHHHHTTTTTCTTCEEEEEES-SBC
T ss_pred HCCCCE-EEEC-----CCCCHHHHHHHHHHHHHHHCCCCEEEEECC-HHH
T ss_conf 779959-9976-----965599999999999753477954999604-278
No 127
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.30A {Deinococcus radiodurans R1} SCOP: d.159.1.9
Probab=27.82 E-value=28 Score=15.01 Aligned_cols=10 Identities=10% Similarity=0.106 Sum_probs=3.5
Q ss_pred HHHHHCCCHH
Q ss_conf 9874107023
Q gi|254780676|r 182 EKVVSAKPDV 191 (329)
Q Consensus 182 ~~v~~A~pdV 191 (329)
+.++++|.||
T Consensus 51 ~~L~~~GvDv 60 (255)
T 1t70_A 51 RGALEAGAGC 60 (255)
T ss_dssp HHHHHHTCSE
T ss_pred HHHHHCCCCE
T ss_conf 9999719979
No 128
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium}
Probab=27.68 E-value=30 Score=14.75 Aligned_cols=130 Identities=13% Similarity=0.115 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCC
Q ss_conf 57999999997077518985054453453258999999999985335868998154623446899987410702332013
Q gi|254780676|r 117 EPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNL 196 (329)
Q Consensus 117 EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNi 196 (329)
-|..++++....|-.++.+-+.. |-.-..++++.+++.+-.+.+..+.++ ...+.++.+.+.+.+.+..+.
T Consensus 65 i~~t~~~~~~~~gad~vtvh~~~-------g~~~l~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 135 (211)
T 3f4w_A 65 GGHFESQLLFDAGADYVTVLGVT-------DVLTIQSCIRAAKEAGKQVVVDMICVD--DLPARVRLLEEAGADMLAVHT 135 (211)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTS-------CHHHHHHHHHHHHHHTCEEEEECTTCS--SHHHHHHHHHHHTCCEEEEEC
T ss_pred CHHHHHHHHHHCCCCEEEEEHHH-------CHHHHHHHHHHHHHHCCEEEEEECCCC--CHHHHHHHHHHCCHHHHHHHH
T ss_conf 68899999997199999982640-------667899999998752443478740899--999999987635889999886
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCCCCC
Q ss_conf 830002756389703589999999999708916701404887642068899999999966993997502227861
Q gi|254780676|r 197 ETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQPTR 271 (329)
Q Consensus 197 ETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~Ps~ 271 (329)
-.....+. . .+.+-+...++..++ ..+.+.-|=+.+ ...++.+.|.|++-+|-.+-=|.
T Consensus 136 ~~~~~~~~-----~---~~~~~i~~~~~~~~~----~~i~v~gGi~~~----~~~~a~~~Gad~iVvGraI~~a~ 194 (211)
T 3f4w_A 136 GTDQQAAG-----R---KPIDDLITMLKVRRK----ARIAVAGGISSQ----TVKDYALLGPDVVIVGSAITHAA 194 (211)
T ss_dssp CHHHHHTT-----C---CSHHHHHHHHHHCSS----CEEEEESSCCTT----THHHHHTTCCSEEEECHHHHTCS
T ss_pred HHCCHHHC-----C---CCHHHHHHHHHHCCC----CCEECCCCCCCC----CHHHHHHCCCCEEEECHHHHCCC
T ss_conf 22531205-----7---699999999997187----665228970605----79999985989999885873799
No 129
>1a53_A IGPS, indole-3-glycerolphosphate synthase; thermostable, TIM-barrel; HET: IGP; 2.00A {Sulfolobus solfataricus} SCOP: c.1.2.4 PDB: 1lbf_A* 1lbl_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 2c3z_A 3b5v_A
Probab=27.40 E-value=30 Score=14.72 Aligned_cols=187 Identities=17% Similarity=0.222 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHCCCCEEECCC-CCCC----------HHHHHCCCCEEEEEECCCCCCCCCCCC---CCCCCCCCC---C
Q ss_conf 6689999999974982365257-8878----------767508972699986652235352234---467899888---8
Q gi|254780676|r 52 SGYKETYNILRSRNLTTVCEEA-GCPN----------IGECWNKNHATFMILGAICTRACTFCN---VATGKPQPL---D 114 (329)
Q Consensus 52 ~~~~~~~~~l~~~~L~TVCeeA-~CPN----------i~ECw~~gtATFMilG~~CTR~C~FC~---V~~G~P~~~---D 114 (329)
+-...+....+.....-++|=- +.|. +...+..|-+-+-+|-+-=-=.+.+=+ |...-..|+ |
T Consensus 31 ~~~~~i~~~~~~~~~~vIaEiKr~SPS~g~~~~d~~~~a~~~e~gA~aiSVlTe~~~F~Gs~~dL~~v~~~v~~PiLrKD 110 (247)
T 1a53_A 31 SLNERILEFNKRNITAIIAEYKRKSPSGLDVERDPIEYSKFMERYAVGLSILTEEKYFNGSYETLRKIASSVSIPILMKD 110 (247)
T ss_dssp CHHHHHHHHHHTTCCCEEEEECSBCTTSCBCCCCHHHHHHHHTTTCSEEEEECCCTTTCCCHHHHHHHHHHCCSCEEEES
T ss_pred CHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEHHC
T ss_conf 99999999874799889987746899998666798999999975982899967888889999999999986068642101
Q ss_pred -HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHH
Q ss_conf -2357999999997077518985054453453258999999999985335868998154623446899987410702332
Q gi|254780676|r 115 -PQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFN 193 (329)
Q Consensus 115 -~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~n 193 (329)
.-.|..|.+| +.+|-.-|.+..-. |.+ ....+-+..-++..-++.|||-. .+.+++.+++++++++
T Consensus 111 FIid~~QI~ea-~~~GADavLLI~~~---L~~---~~l~~l~~~a~~lGle~LvEvh~------~~El~~a~~~~a~iIG 177 (247)
T 1a53_A 111 FIVKESQIDDA-YNLGADTVLLIVKI---LTE---RELESLLEYARSYGMEPLIEIND------ENDLDIALRIGARFIG 177 (247)
T ss_dssp CCCSHHHHHHH-HHHTCSEEEEEGGG---SCH---HHHHHHHHHHHTTTCCCEEEECS------HHHHHHHHHTTCSEEE
T ss_pred CCCCHHHHHHH-HHHCCCHHHHHHHH---HHH---HHHHHHHHHHHHHCCEEEEEECC------HHHHHHHHHCCCCEEE
T ss_conf 23889999999-99466645688874---128---88999999999849875777379------9999999818998498
Q ss_pred H---CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCCCC
Q ss_conf 0---1383000275638970358999999999970891670140488764206889999999996699399750222786
Q gi|254780676|r 194 H---NLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQPT 270 (329)
Q Consensus 194 H---NiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~Ps 270 (329)
= |+.|. .-+.++++++.....+ +.-+..-||| .|.+++ ..|+++|+|-+-||..|--+
T Consensus 178 INnRnL~t~---------~vd~~~~~~l~~~ip~-~~~~IaESGI-----~t~ed~----~~l~~~G~davLIGeslm~~ 238 (247)
T 1a53_A 178 INSRDLETL---------EINKENQRKLISMIPS-NVVKVAESGI-----SERNEI----EELRKLGVNAFLIGSSLMRN 238 (247)
T ss_dssp EESBCTTTC---------CBCHHHHHHHHHHSCT-TSEEEEESCC-----CCHHHH----HHHHHTTCCEEEECHHHHHC
T ss_pred EECCCHHHC---------CCCHHHHHHHHHHCCC-CCEEEEECCC-----CCHHHH----HHHHHCCCCEEEECHHHCCC
T ss_conf 714114320---------4476789999963888-9879996479-----999999----99997799999989887589
No 130
>1t71_A Phosphatase, conserved; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=27.40 E-value=28 Score=14.93 Aligned_cols=14 Identities=7% Similarity=0.166 Sum_probs=5.2
Q ss_pred HHHHHCCCEEEEEC
Q ss_conf 99970775189850
Q gi|254780676|r 124 AVRSMKLSHVVITS 137 (329)
Q Consensus 124 av~~l~Lk~vViTS 137 (329)
-.++.++.+|+.-.
T Consensus 29 l~~~~~iDfvIaNg 42 (281)
T 1t71_A 29 LKSKYQADLVIVNA 42 (281)
T ss_dssp HHHHHTCSEEEEEC
T ss_pred HHHHHCCCEEEECC
T ss_conf 99982899999898
No 131
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp}
Probab=27.35 E-value=31 Score=14.71 Aligned_cols=69 Identities=12% Similarity=0.067 Sum_probs=33.9
Q ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCE-E----EEEEECHHHHHHHHHHHH-----HCCCCEEEC
Q ss_conf 013830002756389703589999999999708916701404-8----876420688999999999-----669939975
Q gi|254780676|r 194 HNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGI-M----LGLGETRNEILQLMDDLR-----TADVDFLTM 263 (329)
Q Consensus 194 HNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGl-M----vGLGEt~eEi~e~l~DLr-----~~gvdilTi 263 (329)
+++.+++..+..+ .+++ ++++.+++.|.-+..|... . +-.=++.+|+.+.+.... ..+-+-+-|
T Consensus 130 ~Gvpv~~~~~~~~---~~~e---e~~~~a~~iGyPviVKps~ggGGrG~~iV~~~~el~~~~~~a~~ea~~~~~~~~vlv 203 (446)
T 3ouz_A 130 AGVPVIPGSDGAL---AGAE---AAKKLAKEIGYPVILKAAAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYM 203 (446)
T ss_dssp TTCCBCSBCSSSC---CSHH---HHHHHHHHHCSSEEEEETTCCTTCSEEEECSGGGHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCCCCCCCCCC---CCHH---HHHHHHHHHCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 6996604767567---9999---999999974998999978889988158975816769999999999997389987899
Q ss_pred CHHCC
Q ss_conf 02227
Q gi|254780676|r 264 GQYLQ 268 (329)
Q Consensus 264 GQYL~ 268 (329)
=+||.
T Consensus 204 Ek~l~ 208 (446)
T 3ouz_A 204 EKYIQ 208 (446)
T ss_dssp EECCS
T ss_pred EEECC
T ss_conf 98259
No 132
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=27.27 E-value=31 Score=14.70 Aligned_cols=93 Identities=12% Similarity=0.103 Sum_probs=46.9
Q ss_pred HHHHHHHH---HHCCCCEEECCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHH
Q ss_conf 89999999---9749823652578878767508972699986652235352234467899-----888823579999999
Q gi|254780676|r 54 YKETYNIL---RSRNLTTVCEEAGCPNIGECWNKNHATFMILGAICTRACTFCNVATGKP-----QPLDPQEPENISWAV 125 (329)
Q Consensus 54 ~~~~~~~l---~~~~L~TVCeeA~CPNi~ECw~~gtATFMilG~~CTR~C~FC~V~~G~P-----~~~D~~EP~rvA~av 125 (329)
+..+++++ -+.+.+.+.- |-.-||+|.--....+-+=..| |+.+.| ......|-.+.|+.+
T Consensus 46 ~~~~~~~i~~l~~~Gv~Gi~v---~GstGE~~~Ls~eEr~~l~~~~--------v~~rvpvi~Gv~~~st~eai~~a~~a 114 (344)
T 2hmc_A 46 FDALVRKGKELIADGMSAVVY---CGSMGDWPLLTDEQRMEGVERL--------VKAGIPVIVGTGAVNTASAVAHAVHA 114 (344)
T ss_dssp HHHHHHHHHHHHHTTCCCEEE---SSGGGTGGGSCHHHHHHHHHHH--------HHTTCCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEE---CEECCCHHHCCHHHHHHHHHHH--------HHCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 999999999999779999997---7543205458999999999999--------73388689967878899999999999
Q ss_pred HHHCCCEEEEECCCCCCCC-CCH-HHHHHHHHHH
Q ss_conf 9707751898505445345-325-8999999999
Q gi|254780676|r 126 RSMKLSHVVITSVDRDDLD-DGG-AQHFAEVISA 157 (329)
Q Consensus 126 ~~l~Lk~vViTSV~RDDL~-DgG-A~hfa~~I~~ 157 (329)
+++|..-+.+...----.. +++ -.||.+.|..
T Consensus 115 ~~~Gad~vlv~pP~y~~~~~~~~~~~~~~~~i~~ 148 (344)
T 2hmc_A 115 QKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSA 148 (344)
T ss_dssp HHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHH
T ss_pred HHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 9839974541586355664114689998888723
No 133
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=27.05 E-value=31 Score=14.67 Aligned_cols=43 Identities=21% Similarity=0.332 Sum_probs=34.9
Q ss_pred CCCEEEEE-------CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 77518985-------05445345325899999999998533586899815
Q gi|254780676|r 129 KLSHVVIT-------SVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 129 ~Lk~vViT-------SV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
+-..|||| .-+||||-..-|..+.+.+.+|.+.+|+..|=+.+
T Consensus 67 ~adiVvi~ag~~~~~g~~R~~ll~~Na~i~~~i~~~i~~~~p~aivlvvs 116 (308)
T 2d4a_B 67 GSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT 116 (308)
T ss_dssp TCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 99899988998889999878999988899999999987346881899947
No 134
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=27.03 E-value=31 Score=14.67 Aligned_cols=20 Identities=10% Similarity=0.120 Sum_probs=14.8
Q ss_pred CHHHHHHHHHHHHHHCCCEE
Q ss_conf 82357999999997077518
Q gi|254780676|r 114 DPQEPENISWAVRSMKLSHV 133 (329)
Q Consensus 114 D~~EP~rvA~av~~l~Lk~v 133 (329)
+.+|-+++.++.++.|++=+
T Consensus 154 T~eD~~~Lv~~~H~~GI~Vi 173 (644)
T 3czg_A 154 SNDDLVALTSRLREAGISLC 173 (644)
T ss_dssp CHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEE
T ss_conf 99999999999998799899
No 135
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta- barrel, lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=27.01 E-value=31 Score=14.67 Aligned_cols=171 Identities=18% Similarity=0.225 Sum_probs=114.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHH
Q ss_conf 88823579999999970775189850544534532589999999999853358689981546234468999874107023
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDV 191 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV 191 (329)
..|.++...+|+|...-|++.+=||--+ ....+.|+++++..|++.|-+=+ -=+.+.++..+++|.+-
T Consensus 34 ~~~~~~a~~~a~al~~~Gi~~iEitl~t---------p~a~e~i~~l~~~~p~~~iGaGT---V~~~~~~~~a~~aGa~F 101 (225)
T 1mxs_A 34 IAREEDILPLADALAAGGIRTLEVTLRS---------QHGLKAIQVLREQRPELCVGAGT---VLDRSMFAAVEAAGAQF 101 (225)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEESSS---------THHHHHHHHHHHHCTTSEEEEEC---CCSHHHHHHHHHHTCSS
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCC---------CHHHHHHHHHHHHCCCCEEEEEE---CCCHHHHHHHHHCCCCE
T ss_conf 5999999999999998799889995899---------40999999999749970786530---36799999999779989
Q ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEEC------C-
Q ss_conf 320138300027563897035899999999997089167014048876420688999999999669939975------0-
Q gi|254780676|r 192 FNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTM------G- 264 (329)
Q Consensus 192 ~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTi------G- 264 (329)
+ |-|.. +.++++++++.+--.. -|.| |..|+..++ +.|++++-+ |
T Consensus 102 i-------------vsP~~----~~~v~~~a~~~~i~~i--PGv~-----TpsEi~~A~----~~G~~~vK~FPA~~~Gg 153 (225)
T 1mxs_A 102 V-------------VTPGI----TEDILEAGVDSEIPLL--PGIS-----TPSEIMMGY----ALGYRRFKLFPAEISGG 153 (225)
T ss_dssp E-------------ECSSC----CHHHHHHHHHCSSCEE--CEEC-----SHHHHHHHH----TTTCCEEEETTHHHHTH
T ss_pred E-------------ECCCC----CHHHHHHHHHCCCCCC--CCCC-----CHHHHHHHH----HCCCCEEEECCCCCCCC
T ss_conf 9-------------88989----5999999986599725--7869-----989999999----86998187764010279
Q ss_pred -HHCCCCCCCCCCCCC-----CCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -222786100780002-----3846999999999974962434048300103189999999999854
Q gi|254780676|r 265 -QYLQPTRKHHKVESF-----VTPQDFKSYETIAYSKGFLMVSASPLTRSSYHAGDDFLRLKNNRRQ 325 (329)
Q Consensus 265 -QYL~Ps~~h~pV~ry-----v~P~eF~~~~~~a~~~Gf~~V~SgPlVRSSY~A~e~~~~~~~~~~~ 325 (329)
.|++--..-+|=.+| |+++...+|-+ .-+...|..+.++..++-....|..+.+..++
T Consensus 154 ~~~lkal~~p~p~i~~~ptGGI~~~n~~~yl~---~~~v~~vggs~l~~~~~i~~~d~~~I~~~a~~ 217 (225)
T 1mxs_A 154 VAAIKAFGGPFGDIRFCPTGGVNPANVRNYMA---LPNVMCVGTTWMLDSSWIKNGDWARIEACSAE 217 (225)
T ss_dssp HHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHH---STTBCCEEECTTSCHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCEEEECCCCHHHHHHHHH---CCCCEEEECCCCCCHHHHCCCCHHHHHHHHHH
T ss_conf 99998640656677166307989889999995---78919998644479878417999999999999
No 136
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=26.66 E-value=31 Score=14.63 Aligned_cols=21 Identities=10% Similarity=0.112 Sum_probs=10.6
Q ss_pred CCCCHHHHHHHHHHHHCCCCE
Q ss_conf 799866899999999749823
Q gi|254780676|r 48 APVSSGYKETYNILRSRNLTT 68 (329)
Q Consensus 48 ~p~~~~~~~~~~~l~~~~L~T 68 (329)
+.+-+.+.++-+...+.++.-
T Consensus 65 ~Gt~~df~~lv~~aH~~GI~V 85 (405)
T 1ht6_A 65 YGNAAELKSLIGALHGKGVQA 85 (405)
T ss_dssp TCCHHHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHHHHCCCEE
T ss_conf 789999999999999888999
No 137
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by light; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=26.64 E-value=31 Score=14.63 Aligned_cols=42 Identities=21% Similarity=0.261 Sum_probs=33.3
Q ss_pred HCCCEEEEEC-------CCCCCCCCCHHHHHHHHHHHHHHHCC-CCEEEE
Q ss_conf 0775189850-------54453453258999999999985335-868998
Q gi|254780676|r 128 MKLSHVVITS-------VDRDDLDDGGAQHFAEVISAIRESAP-STTIEV 169 (329)
Q Consensus 128 l~Lk~vViTS-------V~RDDL~DgGA~hfa~~I~~Ir~~~P-~~~IEv 169 (329)
-+-..||||. -+||||-..-|..|...+..|.+..| ++.|=+
T Consensus 107 ~~aDvVVitaG~prkpG~tR~dLl~~Na~I~k~~~~~I~~~a~~~~~ilV 156 (375)
T 7mdh_A 107 EDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLV 156 (375)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 79998999468899989987999999989999999998742467349982
No 138
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=26.46 E-value=32 Score=14.60 Aligned_cols=135 Identities=13% Similarity=0.103 Sum_probs=53.1
Q ss_pred HHHHHHHCCC-EEEEECCCCCC------CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHH
Q ss_conf 9999970775-18985054453------4532589999999999853358689981546234468999874107023320
Q gi|254780676|r 122 SWAVRSMKLS-HVVITSVDRDD------LDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNH 194 (329)
Q Consensus 122 A~av~~l~Lk-~vViTSV~RDD------L~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nH 194 (329)
.+++..||.. ..|+|+++--+ ..+--+..|.+.++.+.+-.| +.+.--.|.++.+.++.|.+.- +-+.
T Consensus 46 i~t~~alg~~~~~viTalTaQnt~~v~~v~~v~~~~i~~Ql~al~~d~~---~~aIKiG~l~s~~~i~~v~~~l-~~~~- 120 (288)
T 1jxh_A 46 LKTFSALGAYGCSVITALVAENTCGVQSVYRIEPDFVAAQLDSVFSDVR---IDTTKIGMLAETDIVEAVAERL-QRHH- 120 (288)
T ss_dssp HHHHHHTTCEEEEEEEEEEEEETTEEEEEEECCHHHHHHHHHHHHTTSC---CSEEEECCCCSHHHHHHHHHHH-HHTT-
T ss_pred HHHHHHCCCCCCEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCC---CCEEEECCCCCHHHHHHHHHHH-HHCC-
T ss_conf 9999984992130326999665876379998999999999999852588---8889997747588889999999-8679-
Q ss_pred CCCCCCCCCCCCCCCCHH-HHHHHHHHHHHH-C--CCEEEEC----CCEEEEE--EECHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 138300027563897035-899999999997-0--8916701----4048876--420688999999999669939975
Q gi|254780676|r 195 NLETVASNYLMVRPGARY-FHSLRLLQRVKE-L--DPLIFTK----SGIMLGL--GETRNEILQLMDDLRTADVDFLTM 263 (329)
Q Consensus 195 NiETV~rLy~~VRp~a~Y-~rSL~vL~~aK~-~--~~~i~TK----SGlMvGL--GEt~eEi~e~l~DLr~~gvdilTi 263 (329)
....-+.|.+.+...+ --.-+.+...++ . ..++.|= -.+.+|. -++.+++.+..+.|.+.|+.-+-|
T Consensus 121 --~~~~v~dpv~~~~~g~~~~~~~~~~~~~~~Llp~adlITPN~~Ea~~Ll~~~~~~~~~~~~~aa~~l~~~G~~~Vli 197 (288)
T 1jxh_A 121 --VRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDAPHARTEQEMLAQGRALLAMGCEAVLM 197 (288)
T ss_dssp --CCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTCCCCCSHHHHHHHHHHHHHTTCSEEEE
T ss_pred --CCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf --98778656766788860336899999998450415171687899999965783347699999999997667977997
No 139
>3cit_A Sensor histidine kinase; MEGA: 3.30.450.40, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Pseudomonas syringae PV}
Probab=26.39 E-value=7.1 Score=19.20 Aligned_cols=16 Identities=31% Similarity=0.640 Sum_probs=11.7
Q ss_pred CCCCCCCCCCCCCCCC
Q ss_conf 2235352234467899
Q gi|254780676|r 95 ICTRACTFCNVATGKP 110 (329)
Q Consensus 95 ~CTR~C~FC~V~~G~P 110 (329)
+-.|+|.||+.++|--
T Consensus 36 vlqRACaFvAMDhGll 51 (160)
T 3cit_A 36 VLQRACAFVAMDHGLL 51 (160)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCCCEE
T ss_conf 9998778860266568
No 140
>1u83_A Phosphosulfolactate synthase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, lyase; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=25.82 E-value=32 Score=14.52 Aligned_cols=11 Identities=0% Similarity=-0.097 Sum_probs=5.1
Q ss_pred HHHHHHHHHHC
Q ss_conf 89999999974
Q gi|254780676|r 54 YKETYNILRSR 64 (329)
Q Consensus 54 ~~~~~~~l~~~ 64 (329)
...++.++...
T Consensus 52 l~~leD~Le~~ 62 (276)
T 1u83_A 52 LQFFKDAIAGA 62 (276)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 89999999974
No 141
>2w7y_A FCSSBP, probable sugar ABC transporter, sugar-binding protein; solute-binding protein, blood group antigen, carbohydrate transport; HET: A2G GAL FUC; 2.35A {Streptococcus pneumoniae}
Probab=25.79 E-value=32 Score=14.52 Aligned_cols=61 Identities=13% Similarity=0.159 Sum_probs=37.0
Q ss_pred EEEECCCCCCCCC-CHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC-HHHHHHHHH--CCCHHHH
Q ss_conf 8985054453453-25899999999998533586899815462344-689998741--0702332
Q gi|254780676|r 133 VVITSVDRDDLDD-GGAQHFAEVISAIRESAPSTTIEVLTPDFLRK-PHALEKVVS--AKPDVFN 193 (329)
Q Consensus 133 vViTSV~RDDL~D-gGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~-~~al~~v~~--A~pdV~n 193 (329)
+.++....+.-.+ ..+..|-+.|.+-.+.+|+++||+-.-...++ .+.|...+. ..||||-
T Consensus 40 v~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~p~i~V~~~~~~~~~~~~~~l~~~~~ag~~PDi~~ 104 (430)
T 2w7y_A 40 LEFYHGYHHSEDEWPVAKTMRDLYDKFAEEHKDSGVEFKPTPVNGDLKDIMNNKVASGEFPDVID 104 (430)
T ss_dssp EEEEESCCCCTTTCHHHHHHHHHHHHHHHHC--CCSEEEEEECSSCHHHHHHHHHTTTCCCSEEE
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 99997357766530799999999999999885937999981682689999999996799885999
No 142
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=25.51 E-value=33 Score=14.49 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 579999999970775189850544534532589999999999853358689
Q gi|254780676|r 117 EPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTI 167 (329)
Q Consensus 117 EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~I 167 (329)
.|.+..+.....|.+++.+-.-+-+| ..++++.||+.+-.+.|
T Consensus 72 ~P~~~i~~~~~~g~d~I~~H~E~~~~--------~~~~i~~i~~~g~~~Gl 114 (220)
T 2fli_A 72 DPERYVEAFAQAGADIMTIHTESTRH--------IHGALQKIKAAGMKAGV 114 (220)
T ss_dssp SGGGGHHHHHHHTCSEEEEEGGGCSC--------HHHHHHHHHHTTSEEEE
T ss_pred CHHHHHHHHHHCCCCEEEECHHHHCC--------HHHHHHHHHHCCCEEEE
T ss_conf 98888999986599789953233208--------89999999876986999
No 143
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris}
Probab=25.48 E-value=33 Score=14.48 Aligned_cols=85 Identities=14% Similarity=0.105 Sum_probs=54.9
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE-ECCCCCC---CHHHHHHHHHC
Q ss_conf 8882357999999997077518985054453453258999999999985335868998-1546234---46899987410
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEV-LTPDFLR---KPHALEKVVSA 187 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEv-LiPDf~G---~~~al~~v~~A 187 (329)
..+..|-.+.|+.++++|...++++..-.=-..++-..||...+.++....| |=+ -.|-..| ..+.+.++.+.
T Consensus 85 ~~st~~ai~la~~a~~~Gad~i~v~pP~~~~~~~~~~~~f~~i~~a~~~~~P---i~iYn~P~~~g~~ls~~~~~~L~~~ 161 (313)
T 3dz1_A 85 APGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVP---WVLQDYPLTLSVVMTPKVIRQIVMD 161 (313)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSC---EEEEECHHHHCCCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCC---EEEECCCCCCCCCCCHHHHHHHHHC
T ss_conf 5104899999999986598567531000015644778999999985125773---6874376425767769999999840
Q ss_pred CCHHHHHCCCCC
Q ss_conf 702332013830
Q gi|254780676|r 188 KPDVFNHNLETV 199 (329)
Q Consensus 188 ~pdV~nHNiETV 199 (329)
.|+++.--.++.
T Consensus 162 ~~nvi~~k~~s~ 173 (313)
T 3dz1_A 162 SASCVMLKHEDW 173 (313)
T ss_dssp CSSEEEEEECCS
T ss_pred CCCEEEEEECCC
T ss_conf 887489984788
No 144
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=25.36 E-value=33 Score=14.47 Aligned_cols=33 Identities=18% Similarity=0.082 Sum_probs=20.8
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCC
Q ss_conf 6100780002384699999999997496243404830
Q gi|254780676|r 270 TRKHHKVESFVTPQDFKSYETIAYSKGFLMVSASPLT 306 (329)
Q Consensus 270 s~~h~pV~ryv~P~eF~~~~~~a~~~Gf~~V~SgPlV 306 (329)
...|+-..-|+.|.+-.. .--+||-.|-.|.=+
T Consensus 389 ~~~~lcLaDFi~p~~~g~----~D~iG~FaVT~G~~~ 421 (579)
T 3bul_A 389 GFANYCLADFVAPKLSGK----ADYIGAFAVTGGLEE 421 (579)
T ss_dssp SSCCCBGGGGSCBGGGTC----CEEEEEEEEESCTTH
T ss_pred CCCCCCHHHHHCCCCCCC----CCEEEEEEEECCCCH
T ss_conf 888733133315321587----874446887558417
No 145
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, X-RAY analysis, stability, calorimetry lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=25.32 E-value=33 Score=14.46 Aligned_cols=43 Identities=23% Similarity=0.517 Sum_probs=23.7
Q ss_pred HHHHHHHHHCCCEEEECCCEEEEEE-ECHHHHHHHHHHHHHCCCCEEECCHHC
Q ss_conf 9999999970891670140488764-206889999999996699399750222
Q gi|254780676|r 216 LRLLQRVKELDPLIFTKSGIMLGLG-ETRNEILQLMDDLRTADVDFLTMGQYL 267 (329)
Q Consensus 216 L~vL~~aK~~~~~i~TKSGlMvGLG-Et~eEi~e~l~DLr~~gvdilTiGQYL 267 (329)
.+.++++|+.. .-=+++|.| -|.|++.+++ +.+.|-+-+|--+
T Consensus 180 ~~~i~~iK~~t-----~~Pv~vGFGI~t~e~v~~~~----~~~ADGVIVGSai 223 (248)
T 1geq_A 180 YDLLRRAKRIC-----RNKVAVGFGVSKREHVVSLL----KEGANGVVVGSAL 223 (248)
T ss_dssp HHHHHHHHHHC-----SSCEEEESCCCSHHHHHHHH----HTTCSEEEECHHH
T ss_pred HHHHHHHHCCC-----CCCEEEEECCCCHHHHHHHH----HCCCCEEEECHHH
T ss_conf 77888751046-----78637982469999999998----7489999988899
No 146
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=25.13 E-value=33 Score=14.44 Aligned_cols=13 Identities=15% Similarity=0.230 Sum_probs=6.8
Q ss_pred HCCCCEEECCHHC
Q ss_conf 6699399750222
Q gi|254780676|r 255 TADVDFLTMGQYL 267 (329)
Q Consensus 255 ~~gvdilTiGQYL 267 (329)
.-|+-++--||-+
T Consensus 321 ~~G~P~IyyG~E~ 333 (478)
T 2guy_A 321 NDGIPIIYAGQEQ 333 (478)
T ss_dssp SSSEEEEETTGGG
T ss_pred CCCCCEEECCCCC
T ss_conf 8997488787136
No 147
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=25.12 E-value=33 Score=14.44 Aligned_cols=41 Identities=22% Similarity=0.295 Sum_probs=32.7
Q ss_pred CCEEEEEC-------CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 75189850-------544534532589999999999853358689981
Q gi|254780676|r 130 LSHVVITS-------VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVL 170 (329)
Q Consensus 130 Lk~vViTS-------V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvL 170 (329)
-..||||. -+|+||-..-+..|.+.+.+|.+.+|+..|=+.
T Consensus 83 adiVvitag~~~k~g~~R~dll~~N~~I~~~i~~~i~~~~p~~ivlvv 130 (328)
T 2hjr_A 83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICI 130 (328)
T ss_dssp CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 878999713689999988888760178999999998643898099980
No 148
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=24.99 E-value=34 Score=14.42 Aligned_cols=33 Identities=18% Similarity=0.146 Sum_probs=28.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 544534532589999999999853358689981
Q gi|254780676|r 138 VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVL 170 (329)
Q Consensus 138 V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvL 170 (329)
-+|+||-..-|..|.+.+.+|.+.+|+..|=+.
T Consensus 86 ~~r~dll~~Na~I~~~~~~~i~~~~p~~~vivv 118 (303)
T 1o6z_A 86 QTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTT 118 (303)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 976788776567899999986215885499994
No 149
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic degradation; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=24.96 E-value=34 Score=14.42 Aligned_cols=129 Identities=13% Similarity=0.139 Sum_probs=66.9
Q ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCC--HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCH-HHHHCC
Q ss_conf 999999970775189850544534532--58999999999985335868998154623446899987410702-332013
Q gi|254780676|r 120 NISWAVRSMKLSHVVITSVDRDDLDDG--GAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPD-VFNHNL 196 (329)
Q Consensus 120 rvA~av~~l~Lk~vViTSV~RDDL~Dg--GA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pd-V~nHNi 196 (329)
.++|.....|+.+|+|- +..| +-+.....+++.+.. ++..=|-+|+ .+...+++++|+|++ |+-=++
T Consensus 51 ~~~Ei~~~~GfDfv~ID------~EHg~~~~~~~~~~i~aa~~~--~~~~iVRvp~--~~~~~i~r~LD~Ga~GIivP~V 120 (287)
T 2v5j_A 51 YSAELLAGAGFDWLLID------GEHAPNNVQTVLTQLQAIAPY--PSQPVVRPSW--NDPVQIKQLLDVGTQTLLVPMV 120 (287)
T ss_dssp HHHHHHHTSCCSEEEEE------SSSSSCCHHHHHHHHHHHTTS--SSEEEEECSS--SCHHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHCCCCCEEEEE------CCCCCCCHHHHHHHHHHHHCC--CCCCEEECCC--CCHHHHHHHHHCCCCEEEECCC
T ss_conf 99999973898999980------678989999999999987535--9973554678--9999999998379986794675
Q ss_pred CCCCCCCCCCC----------------CCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHH-CCCC
Q ss_conf 83000275638----------------970358999999999970891670140488764206889999999996-6993
Q gi|254780676|r 197 ETVASNYLMVR----------------PGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRT-ADVD 259 (329)
Q Consensus 197 ETV~rLy~~VR----------------p~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~-~gvd 259 (329)
||++..-..|+ .++.|.. ..-.+.+..+. .-+.+-+=||.+= ++-++++.+ -|+|
T Consensus 121 ~s~eea~~~v~~~kypP~G~RG~g~~~~~~~~~~--~~~~~~~~~n~-----~~lvi~qIEt~ea-venldeI~av~GvD 192 (287)
T 2v5j_A 121 QNADEAREAVRATRYPPAGIRGVGSALARASRWN--RIPDYLQKAND-----QMCVLVQIETREA-MKNLPQILDVEGVD 192 (287)
T ss_dssp CSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTT--TSTTHHHHHHH-----HCEEEEEECSHHH-HHTHHHHHTSTTEE
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHHCC-----CEEEEEECCCHHH-HHHHHHHHCCCCCC
T ss_conf 9999999999837179999899986423345566--74067787330-----2488641255999-99899986447887
Q ss_pred EEECCHH
Q ss_conf 9975022
Q gi|254780676|r 260 FLTMGQY 266 (329)
Q Consensus 260 ilTiGQY 266 (329)
.+-||-|
T Consensus 193 ~i~iGP~ 199 (287)
T 2v5j_A 193 GVFIGPA 199 (287)
T ss_dssp EEEECHH
T ss_pred EEEECHH
T ss_conf 6998928
No 150
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM- barrel, rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=24.84 E-value=34 Score=14.40 Aligned_cols=55 Identities=9% Similarity=0.156 Sum_probs=26.5
Q ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHH
Q ss_conf 51898505445345325899999999998533586899815462344689998741070233
Q gi|254780676|r 131 SHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVF 192 (329)
Q Consensus 131 k~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~ 192 (329)
+-||++++- .|.-+-|+..++...+. . +-.|--|-+|- --.+-++.+.+.+||++
T Consensus 4 ~kVvi~~~~-~D~H~lG~~~va~~l~~---~--G~~V~~LG~~~-p~e~iv~~~~~~~~d~V 58 (137)
T 1ccw_A 4 KTIVLGVIG-SDCHAVGNKILDHAFTN---A--GFNVVNIGVLS-PQELFIKAAIETKADAI 58 (137)
T ss_dssp CEEEEEEET-TCCCCHHHHHHHHHHHH---T--TCEEEEEEEEE-CHHHHHHHHHHHTCSEE
T ss_pred CEEEEEECC-CCHHHHHHHHHHHHHHH---C--CCEEEECCCCC-CHHHHHHHHHHHCCCEE
T ss_conf 879999469-87458999999999998---7--98799778666-99999999998399878
No 151
>2v65_A LDH-A, L-lactate dehydrogenase A chain; oxidoreductase, NAD, FISH, cytoplasm, glycolysis, psychrophIle; 2.35A {Champsocephalus gunnari}
Probab=24.61 E-value=34 Score=14.37 Aligned_cols=43 Identities=23% Similarity=0.304 Sum_probs=35.3
Q ss_pred CCCEEEEEC-------CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 775189850-------5445345325899999999998533586899815
Q gi|254780676|r 129 KLSHVVITS-------VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 129 ~Lk~vViTS-------V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
+-..||||. -+|+||-..-|..|.+...+|.+.+|+..|=+.+
T Consensus 87 ~advvvi~ag~prkpg~~R~dLl~~Na~I~~~i~~~i~~~~p~~~vivvs 136 (331)
T 2v65_A 87 NSKVVVVTAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCILMVVS 136 (331)
T ss_dssp TCSEEEECCCC----CCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 99999987899767788878999862566899999987319973999548
No 152
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=24.54 E-value=34 Score=14.36 Aligned_cols=43 Identities=23% Similarity=0.206 Sum_probs=33.8
Q ss_pred CCCEEEEEC-------CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 775189850-------5445345325899999999998533586899815
Q gi|254780676|r 129 KLSHVVITS-------VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 129 ~Lk~vViTS-------V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
+-..||||. -+|+||-..-+..|.+.+.+|.+.+|+..|-+.+
T Consensus 74 daDvvvitaG~~rk~g~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvs 123 (317)
T 3d0o_A 74 DADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 99899983688899898846777767999999998864248972899935
No 153
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A
Probab=24.52 E-value=34 Score=14.36 Aligned_cols=79 Identities=9% Similarity=0.174 Sum_probs=41.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC---HHHHHHHHHCC
Q ss_conf 888235799999999707751898505445345325899999999998533586899815462344---68999874107
Q gi|254780676|r 112 PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRK---PHALEKVVSAK 188 (329)
Q Consensus 112 ~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~---~~al~~v~~A~ 188 (329)
.....|-.+.|+..+.+|.+-+.+...--=-..|.+...|.+.|. +..+--.+=--.|...|. .+.+.++++.-
T Consensus 109 ~~st~~~~~~a~~a~~~G~dav~v~pP~~~~~~~~~~~~~f~~i~---~a~~~Pi~iYn~P~~~g~~is~~~l~~l~~~~ 185 (343)
T 2v9d_A 109 GTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVA---DSVTLPVMLYNFPALTGQDLTPALVKTLADSR 185 (343)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHH---HTCSSCEEEEECHHHHSSCCCHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHH---HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 788999999999998538985884353134555088999999999---85699689996673033304677999998753
Q ss_pred CHHHH
Q ss_conf 02332
Q gi|254780676|r 189 PDVFN 193 (329)
Q Consensus 189 pdV~n 193 (329)
|.|..
T Consensus 186 pni~g 190 (343)
T 2v9d_A 186 SNIIG 190 (343)
T ss_dssp TTEEE
T ss_pred CCEEE
T ss_conf 37008
No 154
>1vdh_A Muconolactone isomerase-like protein; beta barrel, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: d.58.4.10
Probab=24.49 E-value=27 Score=15.07 Aligned_cols=43 Identities=21% Similarity=0.231 Sum_probs=22.3
Q ss_pred EEECHHHHHHHHHHHHHCCCCEEECCHHCCCCCCCCCC---CCCCCHHHHH
Q ss_conf 64206889999999996699399750222786100780---0023846999
Q gi|254780676|r 239 LGETRNEILQLMDDLRTADVDFLTMGQYLQPTRKHHKV---ESFVTPQDFK 286 (329)
Q Consensus 239 LGEt~eEi~e~l~DLr~~gvdilTiGQYL~Ps~~h~pV---~ryv~P~eF~ 286 (329)
++++.+++-+...+|+..+ ||.||.|+...+.| ..|..|.+|+
T Consensus 79 ~~~~~~~Lq~~~~~l~~t~-----lg~~l~~~~Sy~svte~S~Y~~~~~~~ 124 (249)
T 1vdh_A 79 LRPGLDPLLEAEARLSRSA-----FARYLGRSYSFYSVVELGSQEKPLDPE 124 (249)
T ss_dssp EESSHHHHHHHHHHHHHSS-----GGGGEEEEEEEEEEEEEEESSSCCCTT
T ss_pred ECCCHHHHHHHHHHHHHCC-----CCCCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 6899999999999998524-----423344241258753224556776544
No 155
>2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A*
Probab=24.38 E-value=13 Score=17.38 Aligned_cols=127 Identities=17% Similarity=0.171 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCC--------------CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 668999999997498236525788787675089--------------726999866522353522344678998888235
Q gi|254780676|r 52 SGYKETYNILRSRNLTTVCEEAGCPNIGECWNK--------------NHATFMILGAICTRACTFCNVATGKPQPLDPQE 117 (329)
Q Consensus 52 ~~~~~~~~~l~~~~L~TVCeeA~CPNi~ECw~~--------------gtATFMilG~~CTR~C~FC~V~~G~P~~~D~~E 117 (329)
....++++++.+.+- +++.-|-|-..|-. -+-||-|-.+.|-|. ..
T Consensus 57 ~~~~~I~~if~~mGF----~~~~gpeIe~~~~NFdaLniP~dHPARd~~DTfYi~~~~lLRt---------------HT- 116 (294)
T 2rhq_A 57 RTVEEIEDLFLGLGY----EIVDGYEVEQDYYNFEALNLPKSHPARDMQDSFYITDEILMRT---------------HT- 116 (294)
T ss_dssp HHHHHHHHHHHTTTC----EECCCCSEEEHHHHTGGGTCCTTCGGGCTTTSCBSSSSEEECS---------------SS-
T ss_pred HHHHHHHHHHHHCCC----EEEECCEEECCHHHHHHHCCCCCCHHHCCCCEEEEECCCCCCC---------------CC-
T ss_conf 999999999977897----1645884104305766348899830204045188503520377---------------68-
Q ss_pred HHHHHHHHHH----HCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC-CEEEEECCCCCCCHHHHHHHHHCCCH-H
Q ss_conf 7999999997----0775189850544534532589999999999853358-68998154623446899987410702-3
Q gi|254780676|r 118 PENISWAVRS----MKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPS-TTIEVLTPDFLRKPHALEKVVSAKPD-V 191 (329)
Q Consensus 118 P~rvA~av~~----l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~-~~IEvLiPDf~G~~~al~~v~~A~pd-V 191 (329)
..-.+.+.+. .-++++.+--|=|-|-.|. ...|. ..+|.++=|-.-....|+.+++.-.. .
T Consensus 117 S~~q~r~l~~~~~~~p~~~~~~G~VyRrD~iDa-------------tH~p~FhQ~Eg~~v~~~~~~~~Lk~~l~~f~~~~ 183 (294)
T 2rhq_A 117 SPVQARTMEKRNGQGPVKIICPGKVYRRDSDDA-------------THSHQFTQIEGLVVDKNIKMSDLKGTLELVAKKL 183 (294)
T ss_dssp HHHHHHHHHHTTTCSCEEEEEEEEEECCCCCBT-------------TBCSEEEEEEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCEEECCCCCH-------------HHCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 077899998515689838984684772687873-------------4422222301599647877766443788999987
Q ss_pred HHHC--CCCCCCCCCCCCCCCH
Q ss_conf 3201--3830002756389703
Q gi|254780676|r 192 FNHN--LETVASNYLMVRPGAR 211 (329)
Q Consensus 192 ~nHN--iETV~rLy~~VRp~a~ 211 (329)
|.-| +.-.|..+|-.-|.+.
T Consensus 184 f~~~~~~r~rpsyFPfTePs~E 205 (294)
T 2rhq_A 184 FGADREIRLRPSYFPFTEPSVE 205 (294)
T ss_dssp HCTTCCEEEEECCBTTEEEEEE
T ss_pred CCCCCEEEECCCCCCCCCCCCE
T ss_conf 0677458974465854588622
No 156
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix K1}
Probab=24.03 E-value=35 Score=14.30 Aligned_cols=27 Identities=11% Similarity=0.175 Sum_probs=18.0
Q ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 222786100780002384699999999
Q gi|254780676|r 265 QYLQPTRKHHKVESFVTPQDFKSYETI 291 (329)
Q Consensus 265 QYL~Ps~~h~pV~ryv~P~eF~~~~~~ 291 (329)
++++--.++.|..|+-+|+|....-.+
T Consensus 212 e~~~~~~~~~Pl~R~g~pedvA~~v~f 238 (260)
T 2z1n_A 212 EALKSMASRIPMGRVGKPEELASVVAF 238 (260)
T ss_dssp --------CCTTSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 999999846998898299999999999
No 157
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A*
Probab=23.92 E-value=35 Score=14.28 Aligned_cols=103 Identities=16% Similarity=0.055 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHCCC--CEEEEEC-C-CCCCCHHHHHHHHH------CC-CHHHHHCCCCCCCCCCCCC------------
Q ss_conf 99999999853358--6899815-4-62344689998741------07-0233201383000275638------------
Q gi|254780676|r 151 FAEVISAIRESAPS--TTIEVLT-P-DFLRKPHALEKVVS------AK-PDVFNHNLETVASNYLMVR------------ 207 (329)
Q Consensus 151 fa~~I~~Ir~~~P~--~~IEvLi-P-Df~G~~~al~~v~~------A~-pdV~nHNiETV~rLy~~VR------------ 207 (329)
.++.++.+.+..+. ..||=-+ + |-.++.+.+..|-. .+ |=+-.-++-|..++...+.
T Consensus 254 a~~~l~~L~~~~~~~~l~IEqPl~~~d~~~~~e~la~L~~~l~~~g~~vpI~~DE~~~t~~d~~~~i~~~a~d~v~iK~~ 333 (413)
T 1kcz_A 254 MADYIQTLAEAAKPFHLRIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQIKTP 333 (413)
T ss_dssp HHHHHHHHHHHHTTSCEEEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEEECTG
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCEEEECCH
T ss_conf 99999999974667652004887742456699999999998862588774405644168999999986076888995403
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEECCCEEEE--EEECHHHHHHHHHHHHHCCCC
Q ss_conf 9703589999999999708916701404887--642068899999999966993
Q gi|254780676|r 208 PGARYFHSLRLLQRVKELDPLIFTKSGIMLG--LGETRNEILQLMDDLRTADVD 259 (329)
Q Consensus 208 p~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvG--LGEt~eEi~e~l~DLr~~gvd 259 (329)
.-.+...++++.+.+++.| -+.|+| +|||..-......--...|..
T Consensus 334 ~~GGi~ea~~~~~~a~~~G------i~~~igg~~~Et~~s~~a~~hla~a~~~~ 381 (413)
T 1kcz_A 334 DLGGVNNIADAIMYCKANG------MGAYCGGTCNETNRSAEVTTNIGMACGAR 381 (413)
T ss_dssp GGSSTHHHHHHHHHHHHTT------CEEEECCCTTSCHHHHHHHHHHHHHHTCS
T ss_pred HCCCHHHHHHHHHHHHHCC------CEEEEECCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 1388899999999999859------91998578587635899999999734864
No 158
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=23.87 E-value=35 Score=14.28 Aligned_cols=82 Identities=11% Similarity=0.003 Sum_probs=39.2
Q ss_pred CCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHH-------HHHHH
Q ss_conf 98668999999997498236525788787675089726999866522353522344678998888235-------79999
Q gi|254780676|r 50 VSSGYKETYNILRSRNLTTVCEEAGCPNIGECWNKNHATFMILGAICTRACTFCNVATGKPQPLDPQE-------PENIS 122 (329)
Q Consensus 50 ~~~~~~~~~~~l~~~~L~TVCeeA~CPNi~ECw~~gtATFMilG~~CTR~C~FC~V~~G~P~~~D~~E-------P~rvA 122 (329)
......++++.+++++|.-+|- ..|+ ....+...|+.. -.++.
T Consensus 64 ~~~~~~~lk~~l~~~gL~i~~~--~~~~----------------------------~~~~~~s~d~~~r~~~i~~l~~~i 113 (309)
T 2hk0_A 64 SDAELATIRKSAKDNGIILTAG--IGPS----------------------------KTKNLSSEDAAVRAAGKAFFERTL 113 (309)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE--CCCC----------------------------SSSCSSCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEE--ECCC----------------------------CCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999999999999849989996--2687----------------------------678989989999999999999999
Q ss_pred HHHHHHCCCEEEEE--CC--CCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99997077518985--05--44534532589999999999853
Q gi|254780676|r 123 WAVRSMKLSHVVIT--SV--DRDDLDDGGAQHFAEVISAIRES 161 (329)
Q Consensus 123 ~av~~l~Lk~vViT--SV--~RDDL~DgGA~hfa~~I~~Ir~~ 161 (329)
+..+.||-+++++- +. .+++-+..-+..|.+.++.+++.
T Consensus 114 e~A~~lGa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 156 (309)
T 2hk0_A 114 SNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGI 156 (309)
T ss_dssp HHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999829988984167886777888768999999999999999
No 159
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=23.75 E-value=35 Score=14.26 Aligned_cols=15 Identities=13% Similarity=-0.026 Sum_probs=6.9
Q ss_pred HHHHHHHHCCCCEEE
Q ss_conf 999999974962434
Q gi|254780676|r 287 SYETIAYSKGFLMVS 301 (329)
Q Consensus 287 ~~~~~a~~~Gf~~V~ 301 (329)
+..++|.+.+.+.+.
T Consensus 227 ~~~~~a~~~~vk~li 241 (280)
T 2e7y_A 227 EVMESVKAAGVKKVI 241 (280)
T ss_dssp HHHHHHHHHTCCEEE
T ss_pred HHHHHHHHCCCCEEE
T ss_conf 999999976999999
No 160
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=23.68 E-value=35 Score=14.25 Aligned_cols=131 Identities=18% Similarity=0.223 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHCCC--EEEEEC------CCCCCCCCCHH------HHHHHHHHHHHHHCCCCEEEE---ECCCCCCCH
Q ss_conf 3579999999970775--189850------54453453258------999999999985335868998---154623446
Q gi|254780676|r 116 QEPENISWAVRSMKLS--HVVITS------VDRDDLDDGGA------QHFAEVISAIRESAPSTTIEV---LTPDFLRKP 178 (329)
Q Consensus 116 ~EP~rvA~av~~l~Lk--~vViTS------V~RDDL~DgGA------~hfa~~I~~Ir~~~P~~~IEv---LiPDf~G~~ 178 (329)
.+|..+++|++.+.-. .+-|-. |.+ ...|| ....++++++++..+ +.|-| |-.|.....
T Consensus 68 ~~~~~~~~aa~~~~~~~~~iDlN~GCP~~~v~~---~g~Ga~Ll~~p~~~~~iv~~~~~~~~-~pvsvK~RlG~d~~~~~ 143 (318)
T 1vhn_A 68 SEPNELSEAARILSEKYKWIDLNAGCPVRKVVK---EGAGGALLKDLRHFRYIVRELRKSVS-GKFSVKTRLGWEKNEVE 143 (318)
T ss_dssp SCHHHHHHHHHHHTTTCSEEEEEECCCCHHHHH---TTCGGGGGSCHHHHHHHHHHHHHHCS-SEEEEEEESCSSSCCHH
T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCHHHHCC---CCCCCCHHHCHHHHHHHHHHHHHCCC-CCEEEEEECCCCCHHHH
T ss_conf 899999999998515884765674789899766---89731353253789999753211158-84211141276621467
Q ss_pred HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEE--CHHHHHHHHHHHHHC
Q ss_conf 899987410702332013830002756389703589999999999708916701404887642--068899999999966
Q gi|254780676|r 179 HALEKVVSAKPDVFNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGE--TRNEILQLMDDLRTA 256 (329)
Q Consensus 179 ~al~~v~~A~pdV~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGE--t~eEi~e~l~DLr~~ 256 (329)
+-++.+.++|.+.+.=.--|...-| .+.++|+ .++.+|+ ++. .+|-|. +.++..+.+ ...
T Consensus 144 ~~~~~l~~~G~~~ltiH~Rt~~q~y---~g~~~w~----~I~~~k~---~iP-----vi~NGdI~s~~da~~~l---~~t 205 (318)
T 1vhn_A 144 EIYRILVEEGVDEVFIHTRTVVQSF---TGRAEWK----ALSVLEK---RIP-----TFVSGDIFTPEDAKRAL---EES 205 (318)
T ss_dssp HHHHHHHHTTCCEEEEESSCTTTTT---SSCCCGG----GGGGSCC---SSC-----EEEESSCCSHHHHHHHH---HHH
T ss_pred HHHHHHHHHCCCEEEEEEEEHHCCC---CCCCHHH----HHHHHHC---CCC-----CCCCCCCCCHHHHHHHH---HHH
T ss_conf 9999999828646776300022067---7510167----8999871---586-----10158869999999998---723
Q ss_pred CCCEEECCHHCC
Q ss_conf 993997502227
Q gi|254780676|r 257 DVDFLTMGQYLQ 268 (329)
Q Consensus 257 gvdilTiGQYL~ 268 (329)
|||-+-||.-+-
T Consensus 206 g~dGVMIGRgal 217 (318)
T 1vhn_A 206 GCDGLLVARGAI 217 (318)
T ss_dssp CCSEEEESGGGT
T ss_pred CCCEEEECHHHH
T ss_conf 899799717657
No 161
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=23.61 E-value=36 Score=14.24 Aligned_cols=31 Identities=13% Similarity=0.046 Sum_probs=23.1
Q ss_pred EECHHHHHHHHHHHHHCCCCEEECCHHCCCCCCCCC
Q ss_conf 420688999999999669939975022278610078
Q gi|254780676|r 240 GETRNEILQLMDDLRTADVDFLTMGQYLQPTRKHHK 275 (329)
Q Consensus 240 GEt~eEi~e~l~DLr~~gvdilTiGQYL~Ps~~h~p 275 (329)
||-+-+..++|+.|++.|-+. |++|.-.|.-
T Consensus 305 GdGdvDm~~V~kaL~e~GY~G-----~irpDHg~~m 335 (386)
T 3bdk_A 305 QAGDIDMNAVVKLLVDYDWQG-----SLRPDHGRRI 335 (386)
T ss_dssp GGSSCCHHHHHHHHHHTTCCB-----CEECCCCCBC
T ss_pred CCCCCCHHHHHHHHHHCCCCE-----EEECCCCCCC
T ss_conf 987667999999999849945-----7965986533
No 162
>1o4u_A Type II quinolic acid phosphoribosyltransferase; TM1645, structural genomics, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=23.50 E-value=36 Score=14.23 Aligned_cols=181 Identities=18% Similarity=0.180 Sum_probs=91.6
Q ss_pred HHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEEEEECCC--------------------CCCCCCCCC-------CC
Q ss_conf 899999999749823652578878767508972699986652--------------------235352234-------46
Q gi|254780676|r 54 YKETYNILRSRNLTTVCEEAGCPNIGECWNKNHATFMILGAI--------------------CTRACTFCN-------VA 106 (329)
Q Consensus 54 ~~~~~~~l~~~~L~TVCeeA~CPNi~ECw~~gtATFMilG~~--------------------CTR~C~FC~-------V~ 106 (329)
....+.+++..++..-. . -.=|+-+..|+.-+-|-|+. -|..-+|.. +.
T Consensus 59 ~~~~~~~~~~~~~~v~~---~-~~dG~~v~~g~~i~~i~G~~~~il~~ER~~LN~L~~~SGIAT~T~~~v~~~~~~~i~~ 134 (285)
T 1o4u_A 59 IEVSRMFLEKMGLLSKF---N-VEDGEYLEGTGVIGEIEGNTYKLLVAERTLLNVLSVMFSVATTTRRFAEKLKHAKIAA 134 (285)
T ss_dssp HHHHHHHHHHTTCEEEE---S-CCTTCEEESCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSEEEC
T ss_pred HHHHHHHHHHCCCEEEE---E-ECCCCEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999974987999---9-2799882178378999966899999999999999988646579999999864577664
Q ss_pred CCCCCCCCHHHHHHHHHH-----HHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC-CCEEEEECCCCCCCHHH
Q ss_conf 789988882357999999-----997077518985054453453258999999999985335-86899815462344689
Q gi|254780676|r 107 TGKPQPLDPQEPENISWA-----VRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAP-STTIEVLTPDFLRKPHA 180 (329)
Q Consensus 107 ~G~P~~~D~~EP~rvA~a-----v~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P-~~~IEvLiPDf~G~~~a 180 (329)
|-|-.| -.--.++-|-- -.++||.-.|+---+. +. -+..+.+.++++++..| ...|||-+.. .+.
T Consensus 135 TRKt~P-glR~l~k~Av~~GGg~~HR~gL~d~iLIkdNH--i~--~~g~~~~~~~~~~~~~~~~~~i~vEv~~----l~e 205 (285)
T 1o4u_A 135 TRKILP-GLGVLQKIAVVHGGGDPHRLDLSGCVMIKDNH--LK--MYGSAERAVQEVRKIIPFTTKIEVEVEN----LED 205 (285)
T ss_dssp CSCCCT-TTHHHHHHHHHHHTCC--------CEEECHHH--HH--HHSSHHHHHHHHHTTSCTTSCEEEEESS----HHH
T ss_pred CCCCCC-CHHHHHHHHHHHHCCCCCCCCCCCCEEECHHH--HH--HCCCHHHHHHHHHHHCCCCCEEEEEECH----HHH
T ss_conf 351783-54899999998607003457677125772434--64--4178778999888756888627997332----999
Q ss_pred HHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCE
Q ss_conf 99874107023320138300027563897035899999999997089167014048876420688999999999669939
Q gi|254780676|r 181 LEKVVSAKPDVFNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDF 260 (329)
Q Consensus 181 l~~v~~A~pdV~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdi 260 (329)
+...+.+++|++= |. .-+.+.--++.+.++..++++. +.+-=|=+.+.| .+..+.|||+
T Consensus 206 a~~a~~~g~d~I~--------LD-----n~~~~~i~~~v~~l~~~~~~v~----ieaSGGI~~~ni----~~ya~~GVD~ 264 (285)
T 1o4u_A 206 ALRAVEAGADIVM--------LD-----NLSPEEVKDISRRIKDINPNVI----VEVSGGITEENV----SLYDFETVDV 264 (285)
T ss_dssp HHHHHHTTCSEEE--------EE-----SCCHHHHHHHHHHHHHHCTTSE----EEEEECCCTTTG----GGGCCTTCCE
T ss_pred HHHHHHCCCCEEE--------CC-----CCCHHHHHHHHHHHHHHCCCEE----EEEECCCCHHHH----HHHHHCCCCE
T ss_conf 9999976999994--------28-----9987889999999997589779----999899979999----9998659899
Q ss_pred EECCHHCC
Q ss_conf 97502227
Q gi|254780676|r 261 LTMGQYLQ 268 (329)
Q Consensus 261 lTiGQYL~ 268 (329)
+.+|-.-.
T Consensus 265 Is~g~lt~ 272 (285)
T 1o4u_A 265 ISSSRLTL 272 (285)
T ss_dssp EEEGGGTS
T ss_pred EECCHHHC
T ss_conf 98697765
No 163
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=23.47 E-value=36 Score=14.23 Aligned_cols=26 Identities=19% Similarity=0.332 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 99999999853358689981546234
Q gi|254780676|r 151 FAEVISAIRESAPSTTIEVLTPDFLR 176 (329)
Q Consensus 151 fa~~I~~Ir~~~P~~~IEvLiPDf~G 176 (329)
..+.|++||+..|++.|++=+-|=.|
T Consensus 292 v~~lV~alr~~~p~ipI~~H~Hnd~G 317 (718)
T 3bg3_A 292 CTMLVSSLRDRFPDLPLHIHTHDTSG 317 (718)
T ss_dssp HHHHHHHHHHHSTTCCEEEECCCTTS
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 99999999972887079995079736
No 164
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A*
Probab=23.23 E-value=36 Score=14.19 Aligned_cols=41 Identities=22% Similarity=0.382 Sum_probs=31.5
Q ss_pred CCCEEEEE-------CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 77518985-------054453453258999999999985335868998
Q gi|254780676|r 129 KLSHVVIT-------SVDRDDLDDGGAQHFAEVISAIRESAPSTTIEV 169 (329)
Q Consensus 129 ~Lk~vViT-------SV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEv 169 (329)
+-..|||| .-+|+||-..-+..|.+.+.+|.+.+|+..+=+
T Consensus 69 ~aDvvvitaG~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~iviv 116 (312)
T 3hhp_A 69 GADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGI 116 (312)
T ss_dssp TCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 998999998988889998889999866555789988850488408998
No 165
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua}
Probab=23.01 E-value=22 Score=15.66 Aligned_cols=57 Identities=16% Similarity=0.218 Sum_probs=33.7
Q ss_pred HHHHHHHCCCE-EEECC---CEEEEEEECHHHHHHHHHHHHHCCCCEEECC-HHCCCCCCCC
Q ss_conf 99999970891-67014---0488764206889999999996699399750-2227861007
Q gi|254780676|r 218 LLQRVKELDPL-IFTKS---GIMLGLGETRNEILQLMDDLRTADVDFLTMG-QYLQPTRKHH 274 (329)
Q Consensus 218 vL~~aK~~~~~-i~TKS---GlMvGLGEt~eEi~e~l~DLr~~gvdilTiG-QYL~Ps~~h~ 274 (329)
+.+.+++.+.. -.|=+ |-++.+....+++-.+...|.+.|+..+.+- +=.|||..|+
T Consensus 300 lv~~a~~~g~~ak~tGAG~Ggc~~al~~~~~~~~~l~~~~~~~g~~~l~~~~~~~~~~~~~~ 361 (365)
T 3k17_A 300 LADSAENMGGAGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITEGHH 361 (365)
T ss_dssp HHHHHHHTTSEEEECTTCSSSEEEEEESSHHHHHHHHHHHHHTTCEECCCCBCCCEEECC--
T ss_pred HHHHHHHCCEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCC
T ss_conf 99999867908998460650589999888899999999999879976212640135157756
No 166
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=22.74 E-value=37 Score=14.13 Aligned_cols=146 Identities=10% Similarity=-0.018 Sum_probs=82.0
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC-HHHHHHHHHCC
Q ss_conf 98888235799999999707751898505445345325899999999998533586899815462344-68999874107
Q gi|254780676|r 110 PQPLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRK-PHALEKVVSAK 188 (329)
Q Consensus 110 P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~-~~al~~v~~A~ 188 (329)
...++.++-.+++++..++|++++-++|...- .--.+.+..............+..=..++ ...++...+.+
T Consensus 21 ~~~~s~~~k~~i~~~L~~aGv~~IEvg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (293)
T 3ewb_X 21 GVNFDVKEKIQIALQLEKLGIDVIEAGFPISS-------PGDFECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAV 93 (293)
T ss_dssp --CCCHHHHHHHHHHHHHHTCSEEEEECGGGC-------HHHHHHHHHHHHHCCSSEEEEEEESSHHHHHHHHHHHTTCS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC-------HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 99989999999999999839699999668788-------67788999998651213101200035364799999987559
Q ss_pred CHHHHHCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECC
Q ss_conf 023320138300027563897---0358999999999970891670140488764206889999999996699399750
Q gi|254780676|r 189 PDVFNHNLETVASNYLMVRPG---ARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMG 264 (329)
Q Consensus 189 pdV~nHNiETV~rLy~~VRp~---a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiG 264 (329)
-..+.--+.+.+.....++.. ...+......+.++..+..+. .+.|-+-.-+.+++++.+..+.+.|+|.+.|.
T Consensus 94 ~~~~~~~~~~s~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~d~i~l~ 170 (293)
T 3ewb_X 94 SPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQ--FSPEDATRSDRAFLIEAVQTAIDAGATVINIP 170 (293)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEE--EEEETGGGSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEE--EECCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 977999973079988887516599999999999988750776799--81133667634568999999998699799833
No 167
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=22.65 E-value=37 Score=14.12 Aligned_cols=45 Identities=16% Similarity=0.052 Sum_probs=26.1
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCCCC-CCCCCH-HHHHHHHHHH
Q ss_conf 88235799999999707751898505445-345325-8999999999
Q gi|254780676|r 113 LDPQEPENISWAVRSMKLSHVVITSVDRD-DLDDGG-AQHFAEVISA 157 (329)
Q Consensus 113 ~D~~EP~rvA~av~~l~Lk~vViTSV~RD-DL~DgG-A~hfa~~I~~ 157 (329)
....+-...|+.++++|...+.+...-.- -..+.+ ..||....++
T Consensus 75 ~~t~~~~~~~~~a~~~G~d~~~~~~P~y~~~~~~~~i~~~~~~ia~~ 121 (288)
T 2nuw_A 75 LNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARI 121 (288)
T ss_dssp SCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 00899999999887754021310477432311278899999998541
No 168
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, amino-acid biosynthesis cobalamin, precorrin, novel fold; 2.10A {Thermotoga maritima}
Probab=22.42 E-value=37 Score=14.09 Aligned_cols=71 Identities=20% Similarity=0.134 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHH
Q ss_conf 57999999997077518985054453453258999999999985335868998154623446899987410702332
Q gi|254780676|r 117 EPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFN 193 (329)
Q Consensus 117 EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~n 193 (329)
.|...|+.....|..-..|+++++|-...| .-.+.|++|.+.. .+-|.+ ..=-++.+.++.++++|.|.+.
T Consensus 31 ~~~d~~~~~~~~gadei~i~did~~~~~~g---~n~~lI~~I~~~~-~iPl~v--GGGIr~~ed~~~ll~~GadkVi 101 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSG---YDTEMIRFVRPLT-TLPIIA--SGGAGKMEHFLEAFLAGADKAL 101 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSC---CCHHHHHHHGGGC-CSCEEE--ESCCCSTHHHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHCCCCEEEEEEEECCCCCCC---CCHHHHHHHHHEE-CCEEEE--CCCCCCCCCHHHHHHHHHHHEE
T ss_conf 979999999987999899999608755788---6677764345324-854997--6772120210033322000001
No 169
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} PDB: 3hf3_A*
Probab=22.34 E-value=38 Score=14.08 Aligned_cols=148 Identities=19% Similarity=0.222 Sum_probs=67.3
Q ss_pred CCCCCHHHHHHH-------HHHHHHHCCCEEEEEC--------------CCCCCCCCCH-----HHHHHHHHHHHHHHCC
Q ss_conf 988882357999-------9999970775189850--------------5445345325-----8999999999985335
Q gi|254780676|r 110 PQPLDPQEPENI-------SWAVRSMKLSHVVITS--------------VDRDDLDDGG-----AQHFAEVISAIRESAP 163 (329)
Q Consensus 110 P~~~D~~EP~rv-------A~av~~l~Lk~vViTS--------------V~RDDL~DgG-----A~hfa~~I~~Ir~~~P 163 (329)
|.++..+|-+.+ |.-+++.|..-|-|-+ =.|+|-= || +....++|++||+..+
T Consensus 139 p~~mt~~eI~~ii~~f~~AA~rA~~AGfDGVEiH~ahGyLl~qFlSp~~N~RtD~Y-GGs~enR~Rf~~Eii~aIr~~vg 217 (349)
T 3hgj_A 139 PEPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAY-GGSLENRMRFPLQVAQAVREVVP 217 (349)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTT-SSSHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 84288989999999999999999980989146051267999990588768988767-87877888999999999999708
Q ss_pred C-CEEEEECC--CCC-C---C---HHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 8-68998154--623-4---4---68999874107023320138300027563897035899999999997089167014
Q gi|254780676|r 164 S-TTIEVLTP--DFL-R---K---PHALEKVVSAKPDVFNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKS 233 (329)
Q Consensus 164 ~-~~IEvLiP--Df~-G---~---~~al~~v~~A~pdV~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKS 233 (329)
. ..|-+-++ |+. | . .+.++.+.+++.|.++.-.-....-...- ....|. +...+.+|+.-. +.
T Consensus 218 ~~~~i~~R~s~~d~~~~g~~~ee~~~~~~~l~~~g~d~~~~s~~~~~~~~~~~-~~~~~~--~~~~~~ik~~~~-ip--- 290 (349)
T 3hgj_A 218 RELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIP-LAPGFQ--VPFADAVRKRVG-LR--- 290 (349)
T ss_dssp TTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCC-CCTTTT--HHHHHHHHHHHC-CE---
T ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC-CCCCCC--HHHHHHHHHHCC-CC---
T ss_conf 99728996770214679987799999999998759751641256421243456-676433--689999998759-96---
Q ss_pred CEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCC
Q ss_conf 04887642068899999999966993997502227
Q gi|254780676|r 234 GIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQ 268 (329)
Q Consensus 234 GlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~ 268 (329)
=+.+|---+.++..++ |.+-.||++.+|-.|=
T Consensus 291 vi~~G~i~~~e~ae~~---l~~g~~D~V~~gR~~i 322 (349)
T 3hgj_A 291 TGAVGLITTPEQAETL---LQAGSADLVLLGRVLL 322 (349)
T ss_dssp EEECSSCCCHHHHHHH---HHTTSCSEEEESTHHH
T ss_pred EEEECCCCCHHHHHHH---HHCCCCCHHHHHHHHH
T ss_conf 8998893999999999---9879921159889998
No 170
>2v7p_A L-lactate dehydrogenase; oxidoreductase, phosphorylation, NAD, cytoplasm, glycolysis, thermophIle; HET: NAD; 2.10A {Thermus thermophilus} PDB: 2e37_A* 2v6m_A*
Probab=22.31 E-value=38 Score=14.07 Aligned_cols=34 Identities=38% Similarity=0.446 Sum_probs=30.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 5445345325899999999998533586899815
Q gi|254780676|r 138 VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 138 V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
-+|+||-..-|..+.+....|++.+|+..|=+.+
T Consensus 83 ~~R~dl~~~Na~I~~~i~~~i~~~~p~~ivivvs 116 (310)
T 2v7p_A 83 ETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT 116 (310)
T ss_dssp CCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 8878888865899999999873259973999926
No 171
>1uxc_A FRUR (1-57), fructose repressor; DNA-binding protein, LACI family, transcription regulation; NMR {Escherichia coli K12} SCOP: a.35.1.5 PDB: 1uxd_A
Probab=22.24 E-value=18 Score=16.25 Aligned_cols=48 Identities=13% Similarity=0.119 Sum_probs=37.2
Q ss_pred HHHHHH-HCCCCEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 999999-6699399750222786100780002384699999999997496243
Q gi|254780676|r 249 LMDDLR-TADVDFLTMGQYLQPTRKHHKVESFVTPQDFKSYETIAYSKGFLMV 300 (329)
Q Consensus 249 ~l~DLr-~~gvdilTiGQYL~Ps~~h~pV~ryv~P~eF~~~~~~a~~~Gf~~V 300 (329)
+|.|+. .+||.+-|+..+|.-.+.. ..|.|+.-+...+.+.++||.--
T Consensus 2 TlkdIA~~aGVS~sTVSrvLng~~~~----~~Vs~~Tr~rV~~~a~~lgY~pn 50 (65)
T 1uxc_A 2 KLDEIARLAGVSRTTASYVINGKAKQ----YRVSDKTVEKVMAVVREHNYHPN 50 (65)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHTCTTT----TTCTTHHHHHHHHHHHHHTCCCC
T ss_pred CHHHHHHHHCCCHHHHHHHHCCCCCC----CCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 79999999885999999998599987----87799999999999999888979
No 172
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=22.20 E-value=38 Score=14.06 Aligned_cols=142 Identities=11% Similarity=0.063 Sum_probs=63.7
Q ss_pred HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHH-HHHHHHHHH-HHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHC
Q ss_conf 89998741070233201383000275638970358-999999999-9708916701404887642068899999999966
Q gi|254780676|r 179 HALEKVVSAKPDVFNHNLETVASNYLMVRPGARYF-HSLRLLQRV-KELDPLIFTKSGIMLGLGETRNEILQLMDDLRTA 256 (329)
Q Consensus 179 ~al~~v~~A~pdV~nHNiETV~rLy~~VRp~a~Y~-rSL~vL~~a-K~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~ 256 (329)
+.++..+++|.|++-= -++ +...-+...|+ -++.-++.. ++.......+.-.+.+-+-.... .+.++.+.
T Consensus 191 ~~~~~qi~~Gad~i~i-~D~----~a~~ls~~~~~ef~~p~~~~i~~~l~~~~~~~~~~~i~~~~~~~~---~l~~~~~~ 262 (354)
T 3cyv_A 191 LYLNAQIKAGAQAVMI-FDT----WGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQ---WLEAMAET 262 (354)
T ss_dssp HHHHHHHHTTCSEEEE-ECT----TGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTTTT---THHHHHTT
T ss_pred HHHHHHHHCCCCEEEE-EHH----HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH---HHHHHHHH
T ss_conf 9999999639978999-602----432289899989999879999999986257887138731687099---88788861
Q ss_pred CCCEEECCHHCCCCCC------CC-------CCCCCCCHHHHHHHHHHHHHC-C--CCEE---ECCCCCCCCHHHHHHHH
Q ss_conf 9939975022278610------07-------800023846999999999974-9--6243---40483001031899999
Q gi|254780676|r 257 DVDFLTMGQYLQPTRK------HH-------KVESFVTPQDFKSYETIAYSK-G--FLMV---SASPLTRSSYHAGDDFL 317 (329)
Q Consensus 257 gvdilTiGQYL~Ps~~------h~-------pV~ryv~P~eF~~~~~~a~~~-G--f~~V---~SgPlVRSSY~A~e~~~ 317 (329)
|+|.+.+.+-..+... .. |..-+-+|++..+.-...++. | =.++ -+|=+.-+.-..=+++.
T Consensus 263 g~d~ls~d~~~d~~~~~~~~g~~~~l~GNldP~~L~gt~e~i~~~~~~~l~~~~~~~g~I~~~Ghgi~p~tp~env~a~v 342 (354)
T 3cyv_A 263 GCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFV 342 (354)
T ss_dssp SCSEEECCTTSCHHHHHHHHTTTSEEECCBCGGGGGSCHHHHHHHHHHHHTTTTTSSCEEBCBSSCCCTTSCHHHHHHHH
T ss_pred CCCEECCCCCCCHHHHHHHCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHH
T ss_conf 87600566676999999974899538817886897699999999999999984799995997999879998999999999
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999854137
Q gi|254780676|r 318 RLKNNRRQHLH 328 (329)
Q Consensus 318 ~~~~~~~~~~~ 328 (329)
....+..++.|
T Consensus 343 eavr~~~~~~~ 353 (354)
T 3cyv_A 343 EAVHRLSEQYH 353 (354)
T ss_dssp HHHHHHHGGGG
T ss_pred HHHHHHHHHHC
T ss_conf 99999729845
No 173
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=22.05 E-value=25 Score=15.29 Aligned_cols=12 Identities=8% Similarity=-0.161 Sum_probs=5.3
Q ss_pred HHHHHHHHHCCC
Q ss_conf 999999996699
Q gi|254780676|r 247 LQLMDDLRTADV 258 (329)
Q Consensus 247 ~e~l~DLr~~gv 258 (329)
+.++.-|++.|.
T Consensus 260 ~~~~~~l~~~gl 271 (344)
T 3kjx_A 260 AGGLLYLLEQGI 271 (344)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCC
T ss_conf 999999998699
No 174
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJM; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=21.83 E-value=38 Score=14.01 Aligned_cols=56 Identities=13% Similarity=0.232 Sum_probs=26.0
Q ss_pred CCCCCCHHHHHHH-------HHHHHHHCCCEEEEEC--------------CCCCCCCCC----HHHHHHHHHHHHHHHCC
Q ss_conf 9988882357999-------9999970775189850--------------544534532----58999999999985335
Q gi|254780676|r 109 KPQPLDPQEPENI-------SWAVRSMKLSHVVITS--------------VDRDDLDDG----GAQHFAEVISAIRESAP 163 (329)
Q Consensus 109 ~P~~~D~~EP~rv-------A~av~~l~Lk~vViTS--------------V~RDDL~Dg----GA~hfa~~I~~Ir~~~P 163 (329)
.|.++..+|.+++ |.-+++-|..-|-|-. =.|+|-=-| -+....++|++||+..+
T Consensus 130 ~p~~mt~~eI~~ii~~f~~AA~rA~~aGfDGVEIH~ahGyLl~qFlSp~~N~R~DeYGGs~enR~Rf~~Eii~avr~~v~ 209 (338)
T 1z41_A 130 TPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWD 209 (338)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 88237999999999999999999998199806576668889999639402856786777777878899999999999854
Q ss_pred C
Q ss_conf 8
Q gi|254780676|r 164 S 164 (329)
Q Consensus 164 ~ 164 (329)
.
T Consensus 210 ~ 210 (338)
T 1z41_A 210 G 210 (338)
T ss_dssp S
T ss_pred C
T ss_conf 6
No 175
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosynthesis; 1.85A {Thermus thermophilus}
Probab=21.82 E-value=38 Score=14.01 Aligned_cols=61 Identities=10% Similarity=0.171 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHHCCCE--EEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 88235799999999707751--89850544534532589999999999853358689981546
Q gi|254780676|r 113 LDPQEPENISWAVRSMKLSH--VVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPD 173 (329)
Q Consensus 113 ~D~~EP~rvA~av~~l~Lk~--vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPD 173 (329)
....+-+|+++...++-.+. -.+|+|+--..--..-..|-++.+++.+..|++.+|-+..|
T Consensus 141 ~Tr~~~eRI~r~Afe~A~~r~rk~vt~v~K~nv~~~~~g~f~~~~~e~ak~yp~I~~~~~~vD 203 (333)
T 1x0l_A 141 ISKKASERIGRAALRIAEGRPRKTLHIAHKANVLPLTQGLFLDTVKEVAKDFPLVNVQDIIVD 203 (333)
T ss_dssp EEHHHHHHHHHHHHHHHHTSTTCEEEEEECTTTCTTHHHHHHHHHHHHHTTCTTSEEEEEEHH
T ss_pred EEHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHH
T ss_conf 205776799999999999769988752565644512224899999999810885389742267
No 176
>2hfq_A Hypothetical protein; A/B protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Nitrosomonas europaea} SCOP: d.375.1.1
Probab=21.46 E-value=36 Score=14.21 Aligned_cols=27 Identities=19% Similarity=0.606 Sum_probs=18.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 522353522344678998888235799999999707
Q gi|254780676|r 94 AICTRACTFCNVATGKPQPLDPQEPENISWAVRSMK 129 (329)
Q Consensus 94 ~~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l~ 129 (329)
++-++.|+||..... |..|.++|++=|
T Consensus 71 ~vt~~eC~FCHsE~A---------~~eV~~~I~~~G 97 (109)
T 2hfq_A 71 TVTSEECRFCHSEKA---------PDEVIEAIKQNG 97 (109)
T ss_dssp CCCTTTBCCCEEEEC---------CHHHHHHHHHHS
T ss_pred CCCHHHCCCCCCCCC---------CHHHHHHHHHCC
T ss_conf 553401702147759---------989999998688
No 177
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=21.40 E-value=39 Score=13.95 Aligned_cols=176 Identities=13% Similarity=0.151 Sum_probs=89.6
Q ss_pred HHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEEEEECCCC--------------------CCCCCCCC---------
Q ss_conf 8999999997498236525788787675089726999866522--------------------35352234---------
Q gi|254780676|r 54 YKETYNILRSRNLTTVCEEAGCPNIGECWNKNHATFMILGAIC--------------------TRACTFCN--------- 104 (329)
Q Consensus 54 ~~~~~~~l~~~~L~TVCeeA~CPNi~ECw~~gtATFMilG~~C--------------------TR~C~FC~--------- 104 (329)
......+++....+.-++ ..+++ |+-...|+.-+-|=|+.- |..-+|..
T Consensus 70 ~~~~~~v~~~~~~~~~~~-~~~~d-G~~v~~g~~i~~i~G~a~~il~~ER~~LN~L~~~SGIAT~T~~~v~~~~~~~~~i 147 (300)
T 3l0g_A 70 IPILEEVFNMNKEHVKYE-IHKKD-GDITGKNSTLVSGEALAIYLLPIERVILNFIQHASGIASITRQFVDEVSGTKVKI 147 (300)
T ss_dssp HHHHHHHHHHTTTTEEEE-ECCCT-TCEECSSCEEEEEEEEHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCEE
T ss_pred HHHHHHHHHHHCCCEEEE-EEECC-CCEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 999999999849967999-98179-9962124008999407999999999999999999999999999999846998466
Q ss_pred --CCCCCCCCCCHHHHHHHHHHH-----HHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf --467899888823579999999-----9707751898505445345325899999999998533586899815462344
Q gi|254780676|r 105 --VATGKPQPLDPQEPENISWAV-----RSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRK 177 (329)
Q Consensus 105 --V~~G~P~~~D~~EP~rvA~av-----~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~ 177 (329)
..+-.|.. -..++-|--+ .+|+|.-.++--=+. +.-.| -+.+.+.++|+..|...|||-+..
T Consensus 148 ~~TRKT~PGl---R~l~k~Av~~GGg~~HR~~L~d~iLikdNH--i~~~g--~~~~ai~~~~~~~~~~~IeVEv~~---- 216 (300)
T 3l0g_A 148 RSTRKTTPGL---RMLDKYSVCIGGGESYRDNLCDGVLIKDNH--IASCG--SITLAIQRLRKNLKNEYIAIECDN---- 216 (300)
T ss_dssp ECCSCCCTTC---HHHHHHHHHHTTCBCSCSSTTSCEEECHHH--HHHHS--CHHHHHHHHHHHSSSCCEEEEESS----
T ss_pred ECCCCCCCCH---HHHHHHHHHHCCCCCCCCCCCHHHEECCCH--HHHCC--CHHHHHHHHHHHCCCCEEEEEECC----
T ss_conf 0277347427---999999999669875147643444035433--54305--289999999974898629999376----
Q ss_pred HHHHHHHHHCCCHHHH-HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE-EECCCEEEEEEECHHHHHHHHHHHHH
Q ss_conf 6899987410702332-013830002756389703589999999999708916-70140488764206889999999996
Q gi|254780676|r 178 PHALEKVVSAKPDVFN-HNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLI-FTKSGIMLGLGETRNEILQLMDDLRT 255 (329)
Q Consensus 178 ~~al~~v~~A~pdV~n-HNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i-~TKSGlMvGLGEt~eEi~e~l~DLr~ 255 (329)
.+.++..+++++|++= -|+. | .+-..-+ +..++.+ .--||.| +.+. +.+..+
T Consensus 217 ~~~~~~a~~~gad~ImLDn~~----------~-~~~~~~v------~~i~~~v~ieaSGGI-----~~~n----i~~yA~ 270 (300)
T 3l0g_A 217 ISQVEESLSNNVDMILLDNMS----------I-SEIKKAV------DIVNGKSVLEVSGCV-----NIRN----VRNIAL 270 (300)
T ss_dssp HHHHHHHHHTTCSEEEEESCC----------H-HHHHHHH------HHHTTSSEEEEESSC-----CTTT----HHHHHT
T ss_pred HHHHHHHHHCCCEEEECCCCC----------H-HHHHHHH------HHHCCCEEEEEECCC-----CHHH----HHHHHH
T ss_conf 999887641486488608999----------8-9999999------985796799997999-----9999----999997
Q ss_pred CCCCEEECCHHCC
Q ss_conf 6993997502227
Q gi|254780676|r 256 ADVDFLTMGQYLQ 268 (329)
Q Consensus 256 ~gvdilTiGQYL~ 268 (329)
.|||++.+|-+-.
T Consensus 271 ~GVD~IS~G~lt~ 283 (300)
T 3l0g_A 271 TGVDYISIGCITN 283 (300)
T ss_dssp TTCSEEECGGGTS
T ss_pred CCCCEEECCHHHC
T ss_conf 5999998697666
No 178
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=21.17 E-value=40 Score=13.91 Aligned_cols=45 Identities=13% Similarity=0.176 Sum_probs=32.9
Q ss_pred HHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECC
Q ss_conf 999999970891670140488764206889999999996699399750
Q gi|254780676|r 217 RLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMG 264 (329)
Q Consensus 217 ~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiG 264 (329)
-.++.+++...++..|+-+++|-||.-..+. ..|.+.|+.-+||-
T Consensus 153 ~a~~~~~~~~~~l~~~~vLviGaGem~~~~~---~~L~~~g~~~i~v~ 197 (404)
T 1gpj_A 153 AAVELAERELGSLHDKTVLVVGAGEMGKTVA---KSLVDRGVRAVLVA 197 (404)
T ss_dssp HHHHHHHHHHSCCTTCEEEEESCCHHHHHHH---HHHHHHCCSEEEEE
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCHHHHHHH---HHHHHCCCCCEEEE
T ss_conf 9999999861573348189983848899999---99995688860786
No 179
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=21.14 E-value=40 Score=13.91 Aligned_cols=22 Identities=14% Similarity=0.214 Sum_probs=12.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 0688999999999669939975
Q gi|254780676|r 242 TRNEILQLMDDLRTADVDFLTM 263 (329)
Q Consensus 242 t~eEi~e~l~DLr~~gvdilTi 263 (329)
+++++.+.++.|.+.|+..+-|
T Consensus 163 ~~~~~~~a~~~L~~~G~k~Vvi 184 (291)
T 3mbh_A 163 TDEELKEYLRLLSDKGPQVVII 184 (291)
T ss_dssp CHHHHHHHHHHHHHTSCSEEEE
T ss_pred CHHHHHHHHHHHHHHCCCEEEE
T ss_conf 6999999999888618837999
No 180
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=21.08 E-value=40 Score=13.90 Aligned_cols=117 Identities=15% Similarity=0.197 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE--ECCCCCCCHHHHHHHHHCCCH
Q ss_conf 882357999999997077518985054453453258999999999985335868998--154623446899987410702
Q gi|254780676|r 113 LDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEV--LTPDFLRKPHALEKVVSAKPD 190 (329)
Q Consensus 113 ~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEv--LiPDf~G~~~al~~v~~A~pd 190 (329)
.|..+-.+-.+.+...|.+|+=+--+|---.|.-+ ...+.|+.++...+ ..+++ .+- -....++.+.+++++
T Consensus 16 ad~~~L~~~i~~l~~~~~d~iHiDimDG~Fvpn~t--~~~~~i~~i~~~~~-~~~dvHlMv~---~p~~~i~~~~~~g~~ 89 (228)
T 1h1y_A 16 SDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLT--IGAPVIQSLRKHTK-AYLDCHLMVT---NPSDYVEPLAKAGAS 89 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBC--BCHHHHHHHHTTCC-SEEEEEEESS---CGGGGHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC--CCHHHHHHHHHHCC-CCEEEEEEEC---CHHHHHHHHHHCCCC
T ss_conf 69999999999999759998999886796677557--09899999986167-5446889971---657549999856997
Q ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHH
Q ss_conf 3320138300027563897035899999999997089167014048876420688999999
Q gi|254780676|r 191 VFNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMD 251 (329)
Q Consensus 191 V~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~ 251 (329)
.+....|+... . -..++..+++.| .|.|+.+..+-..+++...+.
T Consensus 90 ~i~~H~E~~~~---------~---~~~~i~~i~~~g----~k~Gial~p~t~~~~~~~~l~ 134 (228)
T 1h1y_A 90 GFTFHIEVSRD---------N---WQELIQSIKAKG----MRPGVSLRPGTPVEEVFPLVE 134 (228)
T ss_dssp EEEEEGGGCTT---------T---HHHHHHHHHHTT----CEEEEEECTTSCGGGGHHHHH
T ss_pred EEEEECCCCCC---------C---HHHHHHHHHHCC----CCEEEEECCCCCHHHHHHHHH
T ss_conf 79960500235---------8---999999999749----731158448998899999986
No 181
>2ldx_A APO-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); 2.96A {Mus musculus} SCOP: c.2.1.5 d.162.1.1
Probab=21.07 E-value=40 Score=13.90 Aligned_cols=43 Identities=23% Similarity=0.329 Sum_probs=33.9
Q ss_pred CCCEEEEEC-------CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 775189850-------5445345325899999999998533586899815
Q gi|254780676|r 129 KLSHVVITS-------VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 129 ~Lk~vViTS-------V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
+-..||||. -+|+||-..-|..|.+....|.+.+|+..|=+..
T Consensus 87 ~aDivvi~ag~pr~pg~~R~dll~~N~~I~~~~~~~i~~~~p~~~vivvs 136 (331)
T 2ldx_A 87 NSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT 136 (331)
T ss_dssp TEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 99899973788889999877888765899999999863359843999627
No 182
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=21.05 E-value=40 Score=13.90 Aligned_cols=21 Identities=10% Similarity=0.036 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHCCCEEEE
Q ss_conf 235799999999707751898
Q gi|254780676|r 115 PQEPENISWAVRSMKLSHVVI 135 (329)
Q Consensus 115 ~~EP~rvA~av~~l~Lk~vVi 135 (329)
.+.-.++-+....+++++.-+
T Consensus 101 ~~~lk~~id~ma~~K~N~lhl 121 (627)
T 2epl_X 101 LSSAKKMIEVLALMGYSTFEL 121 (627)
T ss_dssp HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEE
T ss_conf 999999999999839937999
No 183
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=20.88 E-value=4.3 Score=20.75 Aligned_cols=25 Identities=32% Similarity=0.474 Sum_probs=18.9
Q ss_pred CCCCEEECCCCCCCHHHHHCCCCEEEEEECC
Q ss_conf 4982365257887876750897269998665
Q gi|254780676|r 64 RNLTTVCEEAGCPNIGECWNKNHATFMILGA 94 (329)
Q Consensus 64 ~~L~TVCeeA~CPNi~ECw~~gtATFMilG~ 94 (329)
.-+.+|||+|+-=|+.|| |||-.|+
T Consensus 38 ~TIeAv~qSsKyWNlsEC------~i~~s~~ 62 (75)
T 2fqm_A 38 LTIKAVVQSAKHWNLAEC------TFEASGE 62 (75)
T ss_dssp HHHHHHHHHHHHSCGGGS------EEEECSS
T ss_pred HHHHHHHHHHCCCCHHHE------EEEECCC
T ss_conf 999999865032565452------8972687
No 184
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=20.80 E-value=40 Score=13.86 Aligned_cols=136 Identities=13% Similarity=0.118 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHH
Q ss_conf 23579999999970775189850544534532589999999999853358689981546234468999874107023320
Q gi|254780676|r 115 PQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNH 194 (329)
Q Consensus 115 ~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nH 194 (329)
+.+.++ ++++..-+.+.+|| |...|-+.++.+.++.+|+..+ +.|- +. =-...+....++++|.|.+-=
T Consensus 104 ~~~~~~-~~~lv~agvd~ivI------D~ahg~~~~~~~~ik~~r~~~~-~~vi--~G-NVaT~e~a~~L~~aGAD~VkV 172 (361)
T 3khj_A 104 VNEIER-AKLLVEAGVDVIVL------DSAHGHSLNIIRTLKEIKSKMN-IDVI--VG-NVVTEEATKELIENGADGIKV 172 (361)
T ss_dssp TTCHHH-HHHHHHTTCSEEEE------CCSCCSBHHHHHHHHHHHHHCC-CEEE--EE-EECSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHH-HHHHHHCCCCEEEE------ECCCCCCHHHHHHHHHHHHCCC-CCEE--EC-CCCCHHHHHHHHHCCCCEEEE
T ss_conf 308999-99999779999999------2898851489999999860279-8868--65-538889999999719988997
Q ss_pred -----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCCC
Q ss_conf -----138300027563897035899999999997089167014048876420688999999999669939975022278
Q gi|254780676|r 195 -----NLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQP 269 (329)
Q Consensus 195 -----NiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~P 269 (329)
.+=|-+.....-.|+.+ -..++-..++..+-.|+.--|+- +--+|..++ .+|-|.+-+|-.|.=
T Consensus 173 GiG~Gs~CtTr~~tGvg~pq~s--ai~~~~~~~~~~~vpIIADGGi~-----~~gdi~KAl----a~GAd~VMlGs~fag 241 (361)
T 3khj_A 173 GIGPGSICTTRIVAGVGVPQIT--AIEKCSSVASKFGIPIIADGGIR-----YSGDIGKAL----AVGASSVMIGSILAG 241 (361)
T ss_dssp CSSCCTTCCHHHHTCBCCCHHH--HHHHHHHHHHHHTCCEEEESCCC-----SHHHHHHHH----HHTCSEEEESTTTTT
T ss_pred CCCCCCCCCCCCCCCCCCCHHH--HHHHHHHHHCCCCCCEEECCCCC-----CCCHHHHHH----HCCCCHHHHCCCEEE
T ss_conf 3406855552003155783688--99999998604788779558836-----467199998----738840000550025
Q ss_pred CCC
Q ss_conf 610
Q gi|254780676|r 270 TRK 272 (329)
Q Consensus 270 s~~ 272 (329)
+..
T Consensus 242 ~~E 244 (361)
T 3khj_A 242 TEE 244 (361)
T ss_dssp BTT
T ss_pred EEC
T ss_conf 002
No 185
>3dlu_A SRP19, signal recognition particle 19 kDa protein; protein-RNA, cytoplasm, ribonucleoprotein, RNA-binding, RNA binding protein; 1.80A {Pyrococcus furiosus} PDB: 3dlv_B
Probab=20.56 E-value=41 Score=13.83 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=8.0
Q ss_pred HHHHHHHHHHCCCEEEE
Q ss_conf 99999999707751898
Q gi|254780676|r 119 ENISWAVRSMKLSHVVI 135 (329)
Q Consensus 119 ~rvA~av~~l~Lk~vVi 135 (329)
..+++|++.|||+++.+
T Consensus 35 ~EI~~a~~~lgl~~~~i 51 (106)
T 3dlu_A 35 EEIVRAAEELKFKVIRV 51 (106)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCCCEEE
T ss_conf 99999999849970760
No 186
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=20.33 E-value=41 Score=13.80 Aligned_cols=54 Identities=7% Similarity=0.129 Sum_probs=27.5
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCCH-HHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 99999999707751898505445345325-8999999999985335868998154623
Q gi|254780676|r 119 ENISWAVRSMKLSHVVITSVDRDDLDDGG-AQHFAEVISAIRESAPSTTIEVLTPDFL 175 (329)
Q Consensus 119 ~rvA~av~~l~Lk~vViTSV~RDDL~DgG-A~hfa~~I~~Ir~~~P~~~IEvLiPDf~ 175 (329)
.+++++|+.- -+++-|.+-. -.+|+. ...++....+--++.+.+.|=+|.-|+.
T Consensus 69 ~~~~~~I~~A-~~~i~i~~~~--~~~d~~~~~~~~~~L~~aa~rG~~V~VRvl~d~~g 123 (506)
T 1v0w_A 69 AKMTENIGNA-TRTVDISTLA--PFPNGAFQDAIVAGLKESAAKGNKLKVRILVGAAP 123 (506)
T ss_dssp HHHHHHHHTC-SSEEEEEEES--SCCCHHHHHHHHHHHHHHHHTTCCEEEEEEEECCC
T ss_pred HHHHHHHHHH-HCEEEEEEEE--ECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 9999999987-4099999998--66897389999999999996899749999977876
No 187
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=20.08 E-value=42 Score=13.76 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=29.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 5445345325899999999998533586899815
Q gi|254780676|r 138 VDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLT 171 (329)
Q Consensus 138 V~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLi 171 (329)
-+|+||-..-|..|.+.+.+|.+.+|+..+=+.+
T Consensus 91 ~~R~dll~~N~~I~~~~~~~i~~~~p~~ivivvs 124 (324)
T 3gvi_A 91 MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT 124 (324)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 9889999989999999999999669981899946
Done!