HHsearch alignment for GI: 254780677 and conserved domain: smart00234
>smart00234 START in StAR and phosphatidylcholine transfer protein. putative lipid-binding domain in StAR and phosphatidylcholine transfer protein
Probab=97.66 E-value=0.0052 Score=39.63 Aligned_cols=140 Identities=14% Similarity=0.139 Sum_probs=90.0
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHC-HHHCCCCCEEEEEECCCCCCC-EEEEEEEEECCCEE-EEEEEE-EEEC-CCCCE
Q ss_conf 2489998359879999998757423-101875205799972688884-19999999623126-899988-8615-76620
Q gi|254780677|r 3 HFTADRIVNHSSQQMLSLVSDIERY-PEFVPLCKKVVIHERDNYGEN-EVLVASMTINYACM-QREFMT-QVRI-NQKEH 77 (152)
Q Consensus 3 ~~~~~~~i~~~~e~i~~iV~Dve~Y-peFlP~c~~~~v~~r~~~~~~-~~~~a~l~v~~~~~-~~~~~s-~~~~-~~~~~ 77 (152)
T Consensus 46 a~R~~gvV~~~~~~l~~~l~d~~~~r~~Wd~~v~~~~~v~~i~~~~~i~~~~~~~~--~~p~~pRDfv~lR~~~~~~~g~ 123 (206)
T smart00234 46 ASRAVGVVPMVCADLVEELMDDLRYRPEWDKNVAKAETLEVIDNGTVIYHYVSKFV--AGPVSPRDFVFVRYWRELVDGS 123 (206)
T ss_pred EEEEEEEECCCHHHHHHHHHCCCHHHHHCCHHHHEEEEEEEECCCCEEEEEECCCC--CCCCCCCEEEEEEEEEECCCCC
T ss_conf 99989998377999999997276104207245300799999579978999992237--8866886799999999908995
Q ss_pred -EEEEECCCCC----------EEEEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHH----HHHHHHHHHHHH
Q ss_conf -8963124541----------0211379999987998189999999850887899999999999----999999999999
Q gi|254780677|r 78 -YIAVKHIKNL----------FNFLENHWHFEEISESKCKVHFSIKYELKNRLFDMMLKAIFDP----SFLSFAKAFEER 142 (152)
Q Consensus 78 -~i~~~~~~g~----------f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~~~~~~~~~~~----~~~~~i~aF~~R 142 (152)
T Consensus 124 ~~i~~~Sv~~~~~p~~~~~vR~~~~psG~~i~p~~~g~skvt~v~~~d~~g~~p~~l~~~~~~s~~~~~a~~~~a~L~~~ 203 (206)
T smart00234 124 YAVVDVSVTHPTSPPTSGYVRAENLPSGLLIEPLGNGPSKVTWVSHADLKGWLPHWLVRSLIKSGLAEFAKTWVATLQKH 203 (206)
T ss_pred EEEEEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999936788788667762002766369999889997899999986589997389998775510677899999999998
Q ss_pred HH
Q ss_conf 99
Q gi|254780677|r 143 AH 144 (152)
Q Consensus 143 a~ 144 (152)
T Consensus 204 c~ 205 (206)
T smart00234 204 CA 205 (206)
T ss_pred HC
T ss_conf 55