HHsearch alignment of GI: 254780677 and MMDB domain: 1z94_A_

>1z94_A (A:) Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI, protein structure initiative; 2.10A {Chromobacterium violaceum atcc 12472}
Probab=99.26  E-value=5.1e-10  Score=84.04  Aligned_cols=138  Identities=6%  Similarity=-0.095  Sum_probs=104.7

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEEE
Q ss_conf             72489998359879999998757423101875205799972688884199999996231268999888615766208963
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIAV   81 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~~   81 (152)
                      +.++.++.|++|+++||++++|.++|++|.|.+..+......+.+.+..+...+.....+....+..++....+.+.+.+
T Consensus         3 ~~i~~~~~I~ap~e~Vw~~~~d~~~~~~W~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~~v~~~~p~~~l~~   82 (147)
T 1z94_A            3 NTIRLHRVLSAPPERVYRAFLDPLALAKWLPPEGFVCKVLEHDARVGGAYKXEFLAFASGQKHAFGGRYLELVPGERIRY   82 (147)
T ss_dssp             CCEEEEEEESSCHHHHHHHTTCHHHHHHHSSCTTEEEEEEEECCSTTCEEEEEEEETTTCCEEEEEEEEEEEETTTEEEE
T ss_pred             CEEEEEEEECCCHHHHHHHHCCHHHHCEECCCCCCEEEEEEECCEECEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEE
T ss_conf             77999999789999999986397784004079982444666533664078999830799963358999997179989999


Q ss_pred             ECCCC--C-EEEEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             12454--1-0211379999987998189999999850887899999999999999999999999997
Q gi|254780677|r   82 KHIKN--L-FNFLENHWHFEEISESKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEERAHK  145 (152)
Q Consensus        82 ~~~~g--~-f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra~~  145 (152)
                      ....+  + .......|.|.+.+ ++|+|++..++-....+...     +......+++.++++++.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~-~~T~v~~~~~~~~~~~~~~~-----~~~g~~~~l~~Lk~~~E~  143 (147)
T 1z94_A           83 TDRFDDAGLPGDXITTITLAPLS-CGADLSIVQEGIPDAIPPEN-----CYLGWQQSLKQLAALVEP  143 (147)
T ss_dssp             EEEESCCC---CEEEEEEEEEET-TEEEEEEEEECCCTTSCHHH-----HHHHHHHHHHHHHHHHSC
T ss_pred             EEECCCCCCCCCEEEEEEEEECC-CCEEEEEEEECCCCHHHHHH-----HHHHHHHHHHHHHHHHCC
T ss_conf             98305888887679999999849-99899999965887778988-----999999999999999768