HHsearch results for GI: 254780677 and protein with PDBid: 1ln1_A

>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=98.64  E-value=2.4e-06  Score=59.59  Aligned_cols=140  Identities=9%  Similarity=0.120  Sum_probs=94.4

Q ss_pred             CEEEEEEEC-CCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEE---E-CCCCC-
Q ss_conf             248999835-98799999987574231018752057999726888841999999962312689998886---1-57662-
Q gi|254780677|r    3 HFTADRIVN-HSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQV---R-INQKE-   76 (152)
Q Consensus         3 ~~~~~~~i~-~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~---~-~~~~~-   76 (152)
                      .+....+++ +|++++++++.|++.+++|.|.|.++  ++.... ........+...+..-...++...   . .+... 
T Consensus        53 ~~k~~~~i~~~~~~~~~~~l~d~~~~~~wd~~~~~~--~~~~~~-~~~i~y~~~~~p~p~s~RD~v~~~~~~~~~~~~~~  129 (214)
T 1ln1_A           53 EYKVFGVLEDCSPTLLADIYMDSDYRKQWDQYVKEL--YEQECN-GETVVYWEVKYPFPMSNRDYVYLRQRRDLDMEGRK  129 (214)
T ss_dssp             EEEEEEEETTSCHHHHHHHHHCHHHHHHHCTTEEEE--EEEEET-TEEEEEEEECCCTTSCCEEEEEEEEEEEECSTTCC
T ss_pred             EEEEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHEE--EEECCC-CCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCC
T ss_conf             999999994999999999996866789998764147--998469-95899998027876788569999999973777783


Q ss_pred             -EEEEEECCC--------CCE--EEEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -089631245--------410--211379999987998189999999850887899999999999999999999999997
Q gi|254780677|r   77 -HYIAVKHIK--------NLF--NFLENHWHFEEISESKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEERAHK  145 (152)
Q Consensus        77 -~~i~~~~~~--------g~f--~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra~~  145 (152)
                       .++...+.+        |..  ....+.|.|++.++++|+|++....+++..+...+++.+.+..+..+++..++.|.+
T Consensus       130 ~~v~~~~~~~~p~~p~~~~~vR~~~~~~~~~i~~~~~~~t~v~~~~~~Dp~G~iP~~lvn~~~k~~~~~~~~~l~~~~~k  209 (214)
T 1ln1_A          130 IHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKKGSKVFMYYFDNPGGQIPSWLINWAAKNGVPNFLKDMARACQN  209 (214)
T ss_dssp             EEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSSSEEEEEEEEECCSSCCCHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             EEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             79999850347877888995898997015899975999599999997489983769999999998799999999999972