HHSEARCH alignment of GI: 254780677 and SCOP domain: d1em2a_

Alignment

Probab=98.88  E-value=1.1e-07  Score=66.67  Aligned_cols=142  Identities=11%  Similarity=0.112  Sum_probs=98.8

Q ss_pred             EEEEEEECCCHHHHHH-HHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCC-EE-EEEEEEEE--ECCCCCEE
Q ss_conf             4899983598799999-98757423101875205799972688884199999996231-26-89998886--15766208
Q gi|254780677|r    4 FTADRIVNHSSQQMLS-LVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYA-CM-QREFMTQV--RINQKEHY   78 (152)
Q Consensus         4 ~~~~~~i~~~~e~i~~-iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~-~~-~~~~~s~~--~~~~~~~~   78 (152)
                      +..+.++++|++++|+ ++.|++.+++|.|.|.+++++++.+... ............ .+ ...|+...  ..+.+..+
T Consensus        54 ~k~~~~i~~~~~~v~~~~~~d~e~~~~Wd~~~~~~~ile~~~~~~-~i~~~~~~~~~~~~vs~RD~v~~~~~~~~~~~~~  132 (214)
T d1em2a_          54 FILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNT-LISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYL  132 (214)
T ss_dssp             EEEEEEESSCHHHHHHHTTTCHHHHTTTCTTEEEEEEEEEETTTE-EEEEEEECCBTTTTBCCEEEEEEEEEEECSSEEE
T ss_pred             EEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHEEEEEECCCCC-EEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEE
T ss_conf             999999918999999999859587988887776458889817996-0899995366888777848999999997599099


Q ss_pred             EEEECCC--------CC--EEEEEEEEEEEECCC--CCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9631245--------41--021137999998799--81899999998508878999999999999999999999999977
Q gi|254780677|r   79 IAVKHIK--------NL--FNFLENHWHFEEISE--SKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEERAHKI  146 (152)
Q Consensus        79 i~~~~~~--------g~--f~~~~g~W~f~~~~~--~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra~~~  146 (152)
                      +...+..        |.  .....+.|.|+|.++  +.|+|++.+..+++..+...+++.++....-.+++++.++.+++
T Consensus       133 ~~~~s~~~~~~p~~~~~vR~~~~~~~~~i~p~~~~~~~t~vt~~~~~Dp~G~iP~~lvn~~~~~~~~~~~~~Lrk~~~k~  212 (214)
T d1em2a_         133 SSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLRQRISEL  212 (214)
T ss_dssp             EEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEEECEECCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99994035543677872999997666999987788980899999970889978799999999986999999999999985

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: STAR domain
domain: Lipid transport domain of Mln64
species: Human (Homo sapiens) [TaxId: 9606]