HHSEARCH alignment of GI: 254780677 and SCOP domain: d1z94a1

Alignment
>d1z94a1 d.129.3.5 (A:2-144) Hypothetical protein CV1439 {Chromobacterium violaceum [TaxId: 536]}
Probab=97.92  E-value=0.0003  Score=44.61  Aligned_cols=107  Identities=8%  Similarity=0.012  Sum_probs=62.2

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCCCC-CEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEE-CCCCCEEEE
Q ss_conf             24899983598799999987574231018752-0579997268888419999999623126899988861-576620896
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVPLC-KKVVIHERDNYGENEVLVASMTINYACMQREFMTQVR-INQKEHYIA   80 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c-~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~-~~~~~~~i~   80 (152)
                      .++.+++|++||++||+.++|-+...+|++.- ....+.+-+... +..+.......-.|.......++. ++++.+ +.
T Consensus         3 ti~~~r~i~ap~e~Vw~a~Tdp~~~~~W~~p~~~~~~~~~~d~~~-Gg~~~~~~~~~~~g~~~~~~g~v~~~~p~~~-i~   80 (143)
T d1z94a1           3 TIRLHRVLSAPPERVYRAFLDPLALAKWLPPEGFVCKVLEHDARV-GGAYKMEFLAFASGQKHAFGGRYLELVPGER-IR   80 (143)
T ss_dssp             CEEEEEEESSCHHHHHHHTTCHHHHHHHSSCTTEEEEEEEECCST-TCEEEEEEEETTTCCEEEEEEEEEEEETTTE-EE
T ss_pred             EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCC-CEEEEEEEEECCCCCEEEEEEEEEEECCCEE-EE
T ss_conf             899999988999999998649899766307998301257542302-3469999860899968789999998239969-99


Q ss_pred             EEC--CCCC-EEEEEEEEEEEECCCCCEEEEEEEE
Q ss_conf             312--4541-0211379999987998189999999
Q gi|254780677|r   81 VKH--IKNL-FNFLENHWHFEEISESKCKVHFSIK  112 (152)
Q Consensus        81 ~~~--~~g~-f~~~~g~W~f~~~~~~~t~V~~~l~  112 (152)
                      +..  .++. -....-.|.|++.++ +|+|++...
T Consensus        81 ~t~~~~~~~~~~~~~v~~~l~~~~~-gT~lt~~~~  114 (143)
T d1z94a1          81 YTDRFDDAGLPGDMITTITLAPLSC-GADLSIVQE  114 (143)
T ss_dssp             EEEEESCCC---CEEEEEEEEEETT-EEEEEEEEE
T ss_pred             EEEECCCCCCCCCEEEEEEEEECCC-CEEEEEEEE
T ss_conf             9995168888886899999998299-889999998


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: AHSA1 domain
domain: Hypothetical protein CV1439
species: Chromobacterium violaceum [TaxId: 536]