HHSEARCH alignment of GI: 254780677 and SCOP domain: d1zxfa1

Alignment

Probab=96.71  E-value=0.0036  Score=37.71  Aligned_cols=134  Identities=10%  Similarity=0.123  Sum_probs=64.0

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCC------CEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCC
Q ss_conf             724899983598799999987574231018752------05799972688884199999996231268999888615766
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSLVSDIERYPEFVPLC------KKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQK   75 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c------~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~   75 (152)
                      +.++.+++|++|+++||+.++|  ..++|.|.-      .+..+..+   ..+.. ..   ..-.|-...+-.-...+++
T Consensus         4 p~v~~~~~i~Ap~e~Vf~a~te--~~~~Ww~~~~~~~~~~~~~~~~~---~gG~~-~~---~~~dG~~~~~g~v~ei~p~   74 (155)
T d1zxfa1           4 PFVRHSVTVKADRKTAFKTFLE--GFPEWWPNNFRTTKVGAPLGVDK---KGGRW-YE---IDEQGEEHTFGLIRKVDEP   74 (155)
T ss_dssp             SCEEEEEEESSHHHHHHHHHTT--CSSSSSSGGGSTTTTCSSCEEET---TTTEE-EC---CCTTTSCCCCEEEEEEETT
T ss_pred             CEEEEEEEEECCHHHHHHHHHH--HHHHHCCCCCCCCEEEEEEEEEC---CCCEE-EE---ECCCCCEEEEEEEEEEECC
T ss_conf             7599999996999999999773--06752599997724788988667---98669-99---7145321532799999547


Q ss_pred             CEEEEEECCCCC-----EEEEEEEEEEEECCCCCEEEEEEEE-EEECCH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             208963124541-----0211379999987998189999999-850887-899999999999999999999999997
Q gi|254780677|r   76 EHYIAVKHIKNL-----FNFLENHWHFEEISESKCKVHFSIK-YELKNR-LFDMMLKAIFDPSFLSFAKAFEERAHK  145 (152)
Q Consensus        76 ~~~i~~~~~~g~-----f~~~~g~W~f~~~~~~~t~V~~~l~-fe~~~~-~~~~~~~~~~~~~~~~~i~aF~~Ra~~  145 (152)
                      .++.......+.     -....-.|.|++.++++|+|++... |.-... ....+.. -+...-..+++.+++.++.
T Consensus        75 ~rl~~tw~~~~~~~~~~~~~s~v~~~~~~~~~~~T~ltl~h~g~~~~~~~~~~~~~~-~~~~GW~~~L~~L~~~le~  150 (155)
T d1zxfa1          75 DTLVIGWRLNGFGRIDPDNSSEFTVTFVADGQKKTRVDVEHTHFDRMGTKHAKRVRN-GMDKGWPTILQSFQDKIDE  150 (155)
T ss_dssp             TEEEEECCCSSSSSCCCSSCCCEEEEEEEETTTEEEEEEEECSSTTSCHHHHHHHHH-HHTTTHHHHHHHHHHHHHH
T ss_pred             CEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf             079999821786443446545999999861799899999994567666156899986-6645399999999998613

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: AHSA1 domain
domain: Calicheamicin gene cluster protein CalC
species: Micromonospora echinospora [TaxId: 1877]