HHSEARCH alignment of GI: 254780677 and SCOP domain: d2pcsa1

Alignment

Probab=99.82  E-value=4.6e-19  Score=139.32  Aligned_cols=140  Identities=10%  Similarity=0.105  Sum_probs=110.7

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCC---C--CE
Q ss_conf             248999835987999999875742310187520579997268888419999999623126899988861576---6--20
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQ---K--EH   77 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~---~--~~   77 (152)
                      +++.+..|++||++||++++|+++||+|+|||.+++++..+      ...+.+.+..+++..+|..++....   +  ..
T Consensus         2 n~s~~~~i~~~~e~v~~~l~D~~~~~~~~Pg~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~   75 (147)
T d2pcsa1           2 NGNGSIELKGTVEEVWSKLMDPSILSKCIMGCKSLELIGED------KYKADLQIGIAAVKGKYDAIIEVTDIKPPYHYK   75 (147)
T ss_dssp             EEEEEEEEESCHHHHHHHHTCHHHHHHHSTTEEEEEEEETT------EEEEEEEECCGGGCEEEEEEEEEEEEETTTEEE
T ss_pred             CCCCEEEECCCHHHHHHHHCCHHHHHHHCCCHHHCEECCCC------EEEEEEEEEECCEEEEEEEEEEEECCCCCCCEE
T ss_conf             87862996799999999972999987558155231103797------788889985233156667899971357631035


Q ss_pred             EEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             896312454102113799999879981899999998508878999999999999999999999999977089
Q gi|254780677|r   78 YIAVKHIKNLFNFLENHWHFEEISESKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEERAHKIYHL  149 (152)
Q Consensus        78 ~i~~~~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra~~~yg~  149 (152)
                      .+......+....+.+.|.+.+.++++|+|+|+++|++++++.+ +.+++++.++++|+++|.+|+++.+++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~T~v~~~~~~~~~g~l~~-l~~~li~~~~~~~~~~f~~~~~~~l~~  146 (147)
T d2pcsa1          76 LLVNGEGGPGFVNAEGVIDLTPINDECTQLTYTYSAEVGGKVAA-IGQRMLGGVAKLLISDFFKKIQKEIAK  146 (147)
T ss_dssp             EEEEEEETTEEEEEEEEEEEEESSSSEEEEEEEEEEEEESGGGG-GCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCHHCCEEEEEEECCCCCCEEEEEEEEEEECCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             76404322210012357764136688579999999997837999-999999999999999999999998624

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: CoxG-like
domain: Hypothetical protein GKP20
species: Geobacillus kaustophilus [TaxId: 1462]