HHSEARCH alignment of GI: 254780677 and SCOP domain: d2psoa1

Alignment
>d2psoa1 d.129.3.2 (A:908-1104) Star-related lipid transfer protein 13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.37  E-value=3.9e-06  Score=56.72  Aligned_cols=133  Identities=11%  Similarity=0.060  Sum_probs=85.5

Q ss_pred             CCCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEE--ECCCCC--
Q ss_conf             9724899983598799999987574231018752057999726888841999999962312689998886--157662--
Q gi|254780677|r    1 MYHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQV--RINQKE--   76 (152)
Q Consensus         1 M~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~--~~~~~~--   76 (152)
                      ++.++....|+++|+++++.+.+  .-++|.|.|.+++++++.+.. .......+...+..-...++...  ..+.++  
T Consensus        43 ~~~~k~~~~i~a~~~~vl~~~l~--~r~~Wd~~~~~~~~le~~~~~-~~i~y~~~~~p~pvs~RD~v~~~~~~~~~~~~~  119 (197)
T d2psoa1          43 LKLWKASVEVEAPPSVVLNRVLR--ERHLWDEDFVQWKVVETLDRQ-TEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGM  119 (197)
T ss_dssp             CCEEEEEEEESSCHHHHHHHHHH--CGGGTCTTBCCCEEEEEEETT-EEEEEEEECCSSSCCCEEEEEEEEEESCCGGGC
T ss_pred             EEEEEEEEEECCCHHHHHHHHHH--HHHHHHHHHHEEEEEEECCCC-CEEEEEECCCCCCCCCEEEEEEEEEEEECCCCE
T ss_conf             58999999985899999999987--398776441258999991899-799999855887635506999999999579987


Q ss_pred             EEEEEECCCCC---------EEEEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf             08963124541---------0211379999987998189999999850887899999999999999999
Q gi|254780677|r   77 HYIAVKHIKNL---------FNFLENHWHFEEISESKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFA  136 (152)
Q Consensus        77 ~~i~~~~~~g~---------f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i  136 (152)
                      .++...+.+.+         .+.+.+.|.++|.++|.|+|+|.+..++++.+..-+++.+-..++.+++
T Consensus       120 ~~i~~~Sv~~~~~p~~~~VR~~~~~~~~~i~p~~~~~t~vt~~~~~Dp~G~iP~W~~n~~~~~~~~~~~  188 (197)
T d2psoa1         120 CTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVA  188 (197)
T ss_dssp             EEEEEEECCCTTCCCCSSEECCEEEEEEEEEECSTTCEEEEEEEEECCSSSCTTTTTTHHHHHHHHHHH
T ss_pred             EEEEEEECCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             999997035567888884899998132799989999689999999778986746577525789999999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: STAR domain
domain: Star-related lipid transfer protein 13
species: Human (Homo sapiens) [TaxId: 9606]