HHSEARCH alignment of GI: 254780677 and SCOP domain: d2qpva1

Alignment
>d2qpva1 d.129.3.8 (A:1-133) Uncharacterized protein Atu1531 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.95  E-value=2.1e-08  Score=71.22  Aligned_cols=128  Identities=9%  Similarity=-0.018  Sum_probs=87.2

Q ss_pred             CCCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEE
Q ss_conf             97248999835987999999875742310187520579997268888419999999623126899988861576620896
Q gi|254780677|r    1 MYHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIA   80 (152)
Q Consensus         1 M~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~   80 (152)
                      |...+.+..|++|++++|+.++|++++|+|+|++.++..+..     .. .+..  -+..|   .+..+++.+.+..+|.
T Consensus         4 ~~~~~~~i~I~~p~~~v~~~~~d~~~~p~w~~~l~~~~~~~~-----~~-~~~~--~~~~G---~~~~~i~~~~p~~~i~   72 (133)
T d2qpva1           4 MQSRIIHLSVEKPWAEVYDFAANPGNMPRWAAGLAGGLEADG-----ED-WIAK--GGPLG---EVRVNFAPHNEFGVID   72 (133)
T ss_dssp             CCEEEEEEEESSCHHHHHHHHHCGGGGGGTCGGGTTCCEEET-----TE-EEEE--CSSSC---EEEEEECCCCSSCBCC
T ss_pred             CEEEEEEEEECCCHHHHHHHHHCHHHCCHHHHCCCEEEEECC-----CC-EEEE--ECCCC---CEEEEEEECCCCCEEE
T ss_conf             257999999879999999988695543114311341689669-----82-7997--15887---2799999749998999


Q ss_pred             EECCCCCEEEEEEEEEEEECCCC-CEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             31245410211379999987998-18999999985088789999999999999999999999999
Q gi|254780677|r   81 VKHIKNLFNFLENHWHFEEISES-KCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEERAH  144 (152)
Q Consensus        81 ~~~~~g~f~~~~g~W~f~~~~~~-~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra~  144 (152)
                      +.+..|+  ...|.|.|.+.++| +|.|.+.+ +..+... ........ ..+..-++.||+-++
T Consensus        73 w~~~~~~--~~~g~v~fr~~~~g~gt~v~~~~-~~ppg~~-~~~~~~~~-~~v~~dL~rlK~l~E  132 (133)
T d2qpva1          73 HVVTLPD--GLKVYNALRVTPNGSGTEVSFTL-LRLEGMT-DEDFEQDA-SAITADLEMLKSLLE  132 (133)
T ss_dssp             EEEECTT--SCEEEEEEEEEEETTEEEEEEEE-ECCTTCC-HHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             EEEECCC--CCEEEEEEEECCCCCEEEEEEEE-EECCCCC-HHHHHHHH-HHHHHHHHHHHHHHC
T ss_conf             9982599--97889999992699808999999-7089975-67777799-999999999999863


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: Atu1531-like
domain: Uncharacterized protein Atu1531
species: Agrobacterium tumefaciens [TaxId: 358]