Query         gi|254780677|ref|YP_003065090.1| hypothetical protein CLIBASIA_02820 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 152
No_of_seqs    107 out of 1165
Neff          8.3 
Searched_HMMs 13730
Date          Wed Jun  1 08:50:42 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780677.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1t17a_ d.129.3.6 (A:) Hypothe 100.0 3.4E-38 2.5E-42  261.6  16.1  148    1-149     1-148 (148)
  2 d2d4ra1 d.129.3.6 (A:2-147) Hy  99.9 1.8E-21 1.3E-25  154.8  18.6  140    2-146     1-144 (146)
  3 d2pcsa1 d.129.3.10 (A:1-147) H  99.8 4.6E-19 3.4E-23  139.3  15.7  140    3-149     2-146 (147)
  4 d2rera1 d.129.3.6 (A:1-155) Mu  99.7 1.1E-16   8E-21  124.1  16.9  142    3-147     4-148 (155)
  5 d2ns9a1 d.129.3.10 (A:10-156)   99.6 9.2E-14 6.7E-18  105.5  14.3  136    3-144     4-145 (147)
  6 d2b79a1 d.129.3.9 (A:1-137) Hy  99.6 1.5E-13 1.1E-17  104.1  15.4  135    3-145     2-137 (137)
  7 d3cnwa1 d.129.3.8 (A:3-140) Un  99.5 1.9E-12 1.3E-16   97.1  15.6  132    1-142     1-135 (138)
  8 d2qpva1 d.129.3.8 (A:1-133) Un  98.9 2.1E-08 1.5E-12   71.2  14.1  128    1-144     4-132 (133)
  9 d1em2a_ d.129.3.2 (A:) Lipid t  98.9 1.1E-07 7.8E-12   66.7  15.9  142    4-146    54-212 (214)
 10 d1jssa_ d.129.3.2 (A:) Cholest  98.9 8.1E-08 5.9E-12   67.5  14.6  139    3-143    45-198 (199)
 11 d1ln1a_ d.129.3.2 (A:) Phospha  98.8 2.9E-07 2.1E-11   63.9  15.4  140    3-145    46-202 (203)
 12 d1xuva_ d.129.3.5 (A:) Hypothe  98.5   2E-05 1.5E-09   52.2  17.9  140    2-145    12-157 (163)
 13 d2bk0a1 d.129.3.1 (A:2-154) Ma  98.4 1.6E-05 1.2E-09   52.8  14.9  113    2-118     3-124 (153)
 14 d2psoa1 d.129.3.2 (A:908-1104)  98.4 3.9E-06 2.8E-10   56.7  11.7  133    1-136    43-188 (197)
 15 d1txca1 d.129.3.1 (A:1-147) Pl  98.3 0.00012 8.5E-09   47.3  17.4  112    3-117     4-123 (147)
 16 d1icxa_ d.129.3.1 (A:) Plant p  98.3 4.2E-05 3.1E-09   50.1  15.1  136    3-141     4-147 (155)
 17 d1xdfa1 d.129.3.1 (A:1-157) Pl  98.1 0.00021 1.5E-08   45.7  16.4  113    3-118     4-124 (157)
 18 d1fm4a_ d.129.3.1 (A:) Major t  98.0 0.00011 7.9E-09   47.5  13.3  113    3-118     4-125 (159)
 19 d2il5a1 d.129.3.5 (A:5-168) Hy  98.0 0.00054 3.9E-08   43.0  17.8  112    2-116     7-122 (164)
 20 d1xn5a_ d.129.3.5 (A:) Hypothe  97.9 0.00016 1.2E-08   46.4  12.7   96    1-113     4-99  (138)
 21 d1z94a1 d.129.3.5 (A:2-144) Hy  97.9  0.0003 2.2E-08   44.6  13.7  107    3-112     3-114 (143)
 22 d1xfsa_ d.129.3.5 (A:) Hypothe  97.8  0.0012 8.5E-08   40.9  17.4  138    2-144     5-160 (165)
 23 d1e09a_ d.129.3.1 (A:) Major t  97.8  0.0012 8.9E-08   40.7  16.8  112    3-117     4-124 (159)
 24 d1xn6a_ d.129.3.5 (A:) Hypothe  97.6 0.00021 1.6E-08   45.6   8.6   96    1-112     7-102 (143)
 25 d3elia1 d.129.3.5 (A:2-144) Un  97.2  0.0018 1.3E-07   39.6   9.9  113    3-118     2-121 (143)
 26 d2nn5a1 d.129.3.5 (A:1-160) Hy  97.2  0.0081 5.9E-07   35.5  14.6   98    2-116    12-109 (160)
 27 d2k5ga1 d.129.3.5 (A:1-183) Un  97.0   0.013 9.4E-07   34.2  12.9  106    2-117    19-138 (183)
 28 d1zxfa1 d.129.3.5 (A:1-155) Ca  96.7  0.0036 2.7E-07   37.7   7.6  134    2-145     4-150 (155)
 29 d1vjha_ d.129.3.1 (A:) Hypothe  95.3   0.093 6.8E-06   28.7  11.4   83    4-118     7-94  (120)
 30 d1x53a1 d.129.3.5 (A:8-139) Ac  95.2   0.024 1.8E-06   32.5   6.1   97    3-113     5-103 (132)
 31 d2ffsa1 d.129.3.7 (A:1-151) Hy  48.3     7.6 0.00055   16.5  15.8  106    3-117     2-118 (151)

No 1  
>d1t17a_ d.129.3.6 (A:) Hypothetical protein CC1736 {Caulobacter crescentus [TaxId: 155892]}
Probab=100.00  E-value=3.4e-38  Score=261.64  Aligned_cols=148  Identities=25%  Similarity=0.446  Sum_probs=143.5

Q ss_pred             CCCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEE
Q ss_conf             97248999835987999999875742310187520579997268888419999999623126899988861576620896
Q gi|254780677|r    1 MYHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIA   80 (152)
Q Consensus         1 M~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~   80 (152)
                      |++++.+++|+|||+++|++|+|||+||+|+|||++++|+++.+++++..+.+++.++++++..+|++++...++...+.
T Consensus         1 m~~~~~~~vi~~~~e~vf~vV~Dve~Yp~FlP~c~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (148)
T d1t17a_           1 MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDGAVSTVDAEAQVGFSFLREKFATRVRRDKDARSID   80 (148)
T ss_dssp             CCEEEEEEEESSCTHHHHHHHTTTTCCSSCCSSCCCCCEEEEEEETTEEEEEEEEECSTTSSCCEEEEEEEEETTTCEEE
T ss_pred             CCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEEEEEEEEEEEEEEEEEECCCCEEEE
T ss_conf             98515899917999999999998876455433437408985146555412667999974003789999864037833999


Q ss_pred             EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             312454102113799999879981899999998508878999999999999999999999999977089
Q gi|254780677|r   81 VKHIKNLFNFLENHWHFEEISESKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEERAHKIYHL  149 (152)
Q Consensus        81 ~~~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra~~~yg~  149 (152)
                      +.+.+|+|+++.|.|+|.|.++ +|+|+|+++|||++|+++.+++++++.++++|++||++||++|||.
T Consensus        81 ~~~~~g~f~~l~~~W~f~~~~~-~T~V~~~l~fe~~~~l~~~~~~~~~~~~~~~~i~aF~~Ra~~lyg~  148 (148)
T d1t17a_          81 VSLLYGPFKRLNNGWRFMPEGD-ATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQQLHGA  148 (148)
T ss_dssp             EEESSTTSSCEEEEEEEEEETT-EEEEEEEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EECCCCHHHHCCCCEEECCCCC-CEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             9606716652266146426899-5699999999987799999999999999999999999999997394


No 2  
>d2d4ra1 d.129.3.6 (A:2-147) Hypothetical protein TTHA0849 {Thermus thermophilus [TaxId: 274]}
Probab=99.89  E-value=1.8e-21  Score=154.76  Aligned_cols=140  Identities=14%  Similarity=0.226  Sum_probs=122.7

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEEE
Q ss_conf             72489998359879999998757423101875205799972688884199999996231268999888615766208963
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIAV   81 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~~   81 (152)
                      ++++.++.|++||+++|++|+|+++||+|+|+|.+++++++++.    ...+++.....+...++++++....++..+.+
T Consensus         1 p~v~~~~~I~ap~~~V~~~l~D~~~~~~w~p~~~~~~il~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   76 (146)
T d2d4ra1           1 PEVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGA----RTRSRWVAVAMGKKVRWLEEEEWDDENLRNRF   76 (146)
T ss_dssp             CEEEEEEEESSCHHHHHHHHHCHHHHGGGCTTEEEEEEEEEETT----EEEEEEEEEETTEEEEEEEEEEEETTTTEEEE
T ss_pred             CEEEEEEEECCCHHHHHHHHHCHHHHHHHCCCCEEEEEEEECCC----CCEEEEEEEEEEEEEEEEEEEEECCCCCEEEE
T ss_conf             97899999789999999999786667764446189999985699----41689999763566999999999278988999


Q ss_pred             ECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             12454102113799999879981899999998508878----999999999999999999999999977
Q gi|254780677|r   82 KHIKNLFNFLENHWHFEEISESKCKVHFSIKYELKNRL----FDMMLKAIFDPSFLSFAKAFEERAHKI  146 (152)
Q Consensus        82 ~~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~----~~~~~~~~~~~~~~~~i~aF~~Ra~~~  146 (152)
                      ....|+|..+.|.|+|+|.++ +|+|++.++|+++.++    ++.+++..++...+++++++++||.+.
T Consensus        77 ~~~~g~~~~~~g~w~l~~~~~-gT~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~  144 (146)
T d2d4ra1          77 FSPEGDFDRYEGTWVFLPEGE-GTRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLEERVLAA  144 (146)
T ss_dssp             EEEEESCSEEEEEEEEEECSS-SEEEEEEEEEECCCTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EECCCCCCEEEEEEEEEECCC-CEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             986588203799999975699-66999999999758637889999999999999999999999999863


No 3  
>d2pcsa1 d.129.3.10 (A:1-147) Hypothetical protein GKP20 {Geobacillus kaustophilus [TaxId: 1462]}
Probab=99.82  E-value=4.6e-19  Score=139.32  Aligned_cols=140  Identities=10%  Similarity=0.105  Sum_probs=110.7

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCC---C--CE
Q ss_conf             248999835987999999875742310187520579997268888419999999623126899988861576---6--20
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQ---K--EH   77 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~---~--~~   77 (152)
                      +++.+..|++||++||++++|+++||+|+|||.+++++..+      ...+.+.+..+++..+|..++....   +  ..
T Consensus         2 n~s~~~~i~~~~e~v~~~l~D~~~~~~~~Pg~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~   75 (147)
T d2pcsa1           2 NGNGSIELKGTVEEVWSKLMDPSILSKCIMGCKSLELIGED------KYKADLQIGIAAVKGKYDAIIEVTDIKPPYHYK   75 (147)
T ss_dssp             EEEEEEEEESCHHHHHHHHTCHHHHHHHSTTEEEEEEEETT------EEEEEEEECCGGGCEEEEEEEEEEEEETTTEEE
T ss_pred             CCCCEEEECCCHHHHHHHHCCHHHHHHHCCCHHHCEECCCC------EEEEEEEEEECCEEEEEEEEEEEECCCCCCCEE
T ss_conf             87862996799999999972999987558155231103797------788889985233156667899971357631035


Q ss_pred             EEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             896312454102113799999879981899999998508878999999999999999999999999977089
Q gi|254780677|r   78 YIAVKHIKNLFNFLENHWHFEEISESKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEERAHKIYHL  149 (152)
Q Consensus        78 ~i~~~~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra~~~yg~  149 (152)
                      .+......+....+.+.|.+.+.++++|+|+|+++|++++++.+ +.+++++.++++|+++|.+|+++.+++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~T~v~~~~~~~~~g~l~~-l~~~li~~~~~~~~~~f~~~~~~~l~~  146 (147)
T d2pcsa1          76 LLVNGEGGPGFVNAEGVIDLTPINDECTQLTYTYSAEVGGKVAA-IGQRMLGGVAKLLISDFFKKIQKEIAK  146 (147)
T ss_dssp             EEEEEEETTEEEEEEEEEEEEESSSSEEEEEEEEEEEEESGGGG-GCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCHHCCEEEEEEECCCCCCEEEEEEEEEEECCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             76404322210012357764136688579999999997837999-999999999999999999999998624


No 4  
>d2rera1 d.129.3.6 (A:1-155) Multifunctional enzyme TcmN, cyclase/aromatase domain {Streptomyces glaucescens [TaxId: 1907]}
Probab=99.74  E-value=1.1e-16  Score=124.13  Aligned_cols=142  Identities=11%  Similarity=0.208  Sum_probs=113.4

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEEEE
Q ss_conf             24899983598799999987574231018752057999726888841999999962312689998886157662089631
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIAVK   82 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~~~   82 (152)
                      .++.+.+|++||+++|++++|+++||+|+|+|.++.++++.+.+.  ........+.++....+.+.++.+++...+.+.
T Consensus         4 ~~e~si~I~Ap~~~Vw~~l~D~~~~~~w~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (155)
T d2rera1           4 RTDNSIVVNAPFELVWDVTNDIEAWPELFSEYAEAEILRQDGDGF--DFRLKTRPDANGRVWEWVSHRVPDKGSRTVRAH   81 (155)
T ss_dssp             EEEEEEEESSCHHHHHHHHTCGGGHHHHCSSEEEEEEEECCSSCE--EEEEEECCCTTSCCCEEEEEEEEEGGGTEEEEE
T ss_pred             EEEEEEEECCCHHHHHHHHHCHHHHHHHHHHCEEEEEEECCCCCE--EEEEEEEEEEEEEEEEEEEEEEECCCCCEEEEE
T ss_conf             778899987999999999977666766511200789960488725--899999973263368899999983886189999


Q ss_pred             C-CCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             2-4541021137999998799818999999985088--789999999999999999999999999770
Q gi|254780677|r   83 H-IKNLFNFLENHWHFEEISESKCKVHFSIKYELKN--RLFDMMLKAIFDPSFLSFAKAFEERAHKIY  147 (152)
Q Consensus        83 ~-~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~--~~~~~~~~~~~~~~~~~~i~aF~~Ra~~~y  147 (152)
                      . ..+++..+.|.|+|+|.+ ++|+|++.++|+++.  ++....+...++.....++++++++++...
T Consensus        82 ~~~~~~~~~~~~~w~~~~~~-~gT~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lk~~~E~~~  148 (155)
T d2rera1          82 RVETGPFAYMNLHWTYRAVA-GGTEMRWVQEFDMKPGAPFDNAHMTAHLNTTTRANMERIKKIIEDRH  148 (155)
T ss_dssp             ESSCTTEEEEEEEEEEEEET-TEEEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCEEEEEEEEEEECC-CCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             40576510068999996147-76599999999987885230899999998778999999999998677


No 5  
>d2ns9a1 d.129.3.10 (A:10-156) Hypothetical protein APE2225 {Aeropyrum pernix [TaxId: 56636]}
Probab=99.55  E-value=9.2e-14  Score=105.47  Aligned_cols=136  Identities=8%  Similarity=0.079  Sum_probs=89.8

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECC---CEEEEEEEEEEECCCCCEEE
Q ss_conf             248999835987999999875742310187520579997268888419999999623---12689998886157662089
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINY---ACMQREFMTQVRINQKEHYI   79 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~---~~~~~~~~s~~~~~~~~~~i   79 (152)
                      +++++..|++||++||++++|+++||+|+|+|.++++.....   ..  ......+.   ........+...........
T Consensus         4 k~e~si~I~ap~e~Vw~~l~D~~~~~~w~p~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (147)
T d2ns9a1           4 RYEGSFEVSKTPEEVFEFLTDPKRFSRAFPGFKSVEVEDGSF---TI--ELRLSLGPLRGDARVRASFEDLEKPSKATVK   78 (147)
T ss_dssp             EEEEEEEESSCHHHHHHHHTCHHHHGGGSTTEEEEEEETTEE---EE--EEEEESSSSEEEEEEEEEEEEEETTTEEEEE
T ss_pred             EEEEEEEECCCHHHHHHHHHCHHHHHHCCCCHHHEEECCCCC---CE--EEEEEEEEEEEEEEEEEEEEEECCCCCEEEE
T ss_conf             998899976999999998749766433565102103036665---40--5799999986676314434540588622578


Q ss_pred             EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             63124541021137999998799818999999985088789---999999999999999999999999
Q gi|254780677|r   80 AVKHIKNLFNFLENHWHFEEISESKCKVHFSIKYELKNRLF---DMMLKAIFDPSFLSFAKAFEERAH  144 (152)
Q Consensus        80 ~~~~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~---~~~~~~~~~~~~~~~i~aF~~Ra~  144 (152)
                      ......+......+.|++++.+ ++|+|++..++++..++-   +.++...+++.++.+++++++|+.
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~~-~gt~v~~~~~~~~~g~~~~l~~~~v~~~~~~~~~~~l~~lk~~~~  145 (147)
T d2ns9a1          79 GSGRGAGSTLDFTLRFAVEPSG-GGSRVSWVFEGNVGGLAASMGGRVLDSLARRMINDVISGVKRELG  145 (147)
T ss_dssp             EEEECSSEEEEEEEEEEEEEET-TEEEEEEEEEEEEEEGGGGSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECCCCCEEEEEEEEEEECC-CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8640366200048999987449-986999999999685578878999999999999999999999874


No 6  
>d2b79a1 d.129.3.9 (A:1-137) Hypothetical protein SMU440 {Streptococcus mutans [TaxId: 1309]}
Probab=99.55  E-value=1.5e-13  Score=104.06  Aligned_cols=135  Identities=7%  Similarity=0.036  Sum_probs=103.4

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEEEE
Q ss_conf             24899983598799999987574231018752057999726888841999999962312689998886157662089631
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIAVK   82 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~~~   82 (152)
                      .++.+..|++||+++|++++|+++||+|.|.|.+++......  .+......  ...++ ...++ -...+++ +.+.+.
T Consensus         2 ~~s~si~I~Ap~e~Vw~~~~d~~~~~~W~~~~~~~~~~~~~~--~G~~~~~~--~~~~~-~~~~~-v~~~~p~-~~~~~~   74 (137)
T d2b79a1           2 KFSFELAVNTKKEDAWTYYSQVNQWFVWEGDLEQISLEGEFT--TGQKGKMK--MEDMP-ELAFT-LVEVREN-QCFSDL   74 (137)
T ss_dssp             EEEEEEEESSCHHHHHHHHHCGGGGGGTSTTEEEEEESSSSS--TTCEEEEE--ETTSC-CEEEE-ECCCBTT-TEEEEE
T ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC--CEEEEEEE--ECCCC-CEEEE-EECCCCC-CEEEEE
T ss_conf             059999984999999999865530734457642103125566--20899999--75776-30331-0000577-479999


Q ss_pred             CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEE-ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             24541021137999998799818999999985-0887899999999999999999999999997
Q gi|254780677|r   83 HIKNLFNFLENHWHFEEISESKCKVHFSIKYE-LKNRLFDMMLKAIFDPSFLSFAKAFEERAHK  145 (152)
Q Consensus        83 ~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe-~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra~~  145 (152)
                      . .+++....+.|.+.+.++|+|+|++.++|. +..++.+.++.+.++....+.++.++++|+.
T Consensus        75 ~-~~~~~~~~~~~~~~~~~~g~t~vt~~~~~~g~~~~~~~~~~~~~v~~~~~~~l~~LK~~~Ea  137 (137)
T d2b79a1          75 T-ATPFGNVLFEHEILENPDGTISLRHSVSLTDSDTTEEALAFLKQIFADVPESVGKLKQILET  137 (137)
T ss_dssp             E-EETTEEEEEEEEEEECTTSCEEEEEEEEECSCSCCTTHHHHHHHHHTTHHHHHHHHHHHHTC
T ss_pred             E-CCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             4-36530466699985589996899999860466506789999999988799999999998669


No 7  
>d3cnwa1 d.129.3.8 (A:3-140) Uncharacterized protein XoxI {Bacillus cereus [TaxId: 1396]}
Probab=99.47  E-value=1.9e-12  Score=97.13  Aligned_cols=132  Identities=17%  Similarity=0.156  Sum_probs=91.7

Q ss_pred             CCCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEE
Q ss_conf             97248999835987999999875742310187520579997268888419999999623126899988861576620896
Q gi|254780677|r    1 MYHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIA   80 (152)
Q Consensus         1 M~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~   80 (152)
                      |++++.+..|++||+++|++|.|++++|+|+|+..+++...   .|...    .+....++..  ....+..+.+.+.+.
T Consensus         1 m~~~~~si~I~A~pe~VW~~v~df~~~~~W~p~v~~~~~~~---~G~~R----~~~~~~g~~~--~E~l~~~d~~~~~~~   71 (138)
T d3cnwa1           1 MAHTTTSMEIFGSPEQVWQLIGGFNSLPDWLPYIPSSKLTE---GGRVR----HLANPDGDTI--IERLEVFNDKERYYT   71 (138)
T ss_dssp             CEEEEEEEEESSCHHHHHHHHCCTTCGGGTCTTCSEEEEEG---GGTEE----EEECTTCCEE--EEEEEEEETTTTEEE
T ss_pred             CCCEEEEEEEECCHHHHHHHHHCCCCHHHHHCCCCEEEEEC---CCEEE----EEEECCCCEE--EEEEEEEECCCCEEE
T ss_conf             99379999996899999998757040678733454147505---75069----9980687536--799999707772899


Q ss_pred             EECCCCC--EEEEEEEEEEEECCCC-CEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3124541--0211379999987998-189999999850887899999999999999999999999
Q gi|254780677|r   81 VKHIKNL--FNFLENHWHFEEISES-KCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEER  142 (152)
Q Consensus        81 ~~~~~g~--f~~~~g~W~f~~~~~~-~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~R  142 (152)
                      +...+|+  +++..|.|++.|.++| +|.|+++.+|+.....-.. +....+.+.+..++++++|
T Consensus        72 y~~~~~~~p~~~~~~~~~l~p~~~g~~t~v~w~~~f~p~~~~~~~-~~~~~~~~~~~~l~~L~~~  135 (138)
T d3cnwa1          72 YSIMNAPFPVTNYLSTIQVKEGTESNTSLVEWSGTFTPVEVSDEE-AINLFHGIYSDGLKALQQA  135 (138)
T ss_dssp             EEEEECSSSEEEEEEEEEEEECSSTTCEEEEEEEEEEESSSCHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf             999338876000589999999789985899999999639999799-9999999999999999986


No 8  
>d2qpva1 d.129.3.8 (A:1-133) Uncharacterized protein Atu1531 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.95  E-value=2.1e-08  Score=71.22  Aligned_cols=128  Identities=9%  Similarity=-0.018  Sum_probs=87.2

Q ss_pred             CCCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEE
Q ss_conf             97248999835987999999875742310187520579997268888419999999623126899988861576620896
Q gi|254780677|r    1 MYHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIA   80 (152)
Q Consensus         1 M~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~   80 (152)
                      |...+.+..|++|++++|+.++|++++|+|+|++.++..+..     .. .+..  -+..|   .+..+++.+.+..+|.
T Consensus         4 ~~~~~~~i~I~~p~~~v~~~~~d~~~~p~w~~~l~~~~~~~~-----~~-~~~~--~~~~G---~~~~~i~~~~p~~~i~   72 (133)
T d2qpva1           4 MQSRIIHLSVEKPWAEVYDFAANPGNMPRWAAGLAGGLEADG-----ED-WIAK--GGPLG---EVRVNFAPHNEFGVID   72 (133)
T ss_dssp             CCEEEEEEEESSCHHHHHHHHHCGGGGGGTCGGGTTCCEEET-----TE-EEEE--CSSSC---EEEEEECCCCSSCBCC
T ss_pred             CEEEEEEEEECCCHHHHHHHHHCHHHCCHHHHCCCEEEEECC-----CC-EEEE--ECCCC---CEEEEEEECCCCCEEE
T ss_conf             257999999879999999988695543114311341689669-----82-7997--15887---2799999749998999


Q ss_pred             EECCCCCEEEEEEEEEEEECCCC-CEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             31245410211379999987998-18999999985088789999999999999999999999999
Q gi|254780677|r   81 VKHIKNLFNFLENHWHFEEISES-KCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEERAH  144 (152)
Q Consensus        81 ~~~~~g~f~~~~g~W~f~~~~~~-~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra~  144 (152)
                      +.+..|+  ...|.|.|.+.++| +|.|.+.+ +..+... ........ ..+..-++.||+-++
T Consensus        73 w~~~~~~--~~~g~v~fr~~~~g~gt~v~~~~-~~ppg~~-~~~~~~~~-~~v~~dL~rlK~l~E  132 (133)
T d2qpva1          73 HVVTLPD--GLKVYNALRVTPNGSGTEVSFTL-LRLEGMT-DEDFEQDA-SAITADLEMLKSLLE  132 (133)
T ss_dssp             EEEECTT--SCEEEEEEEEEEETTEEEEEEEE-ECCTTCC-HHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             EEEECCC--CCEEEEEEEECCCCCEEEEEEEE-EECCCCC-HHHHHHHH-HHHHHHHHHHHHHHC
T ss_conf             9982599--97889999992699808999999-7089975-67777799-999999999999863


No 9  
>d1em2a_ d.129.3.2 (A:) Lipid transport domain of Mln64 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.88  E-value=1.1e-07  Score=66.67  Aligned_cols=142  Identities=11%  Similarity=0.112  Sum_probs=98.8

Q ss_pred             EEEEEEECCCHHHHHH-HHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCC-EE-EEEEEEEE--ECCCCCEE
Q ss_conf             4899983598799999-98757423101875205799972688884199999996231-26-89998886--15766208
Q gi|254780677|r    4 FTADRIVNHSSQQMLS-LVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYA-CM-QREFMTQV--RINQKEHY   78 (152)
Q Consensus         4 ~~~~~~i~~~~e~i~~-iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~-~~-~~~~~s~~--~~~~~~~~   78 (152)
                      +..+.++++|++++|+ ++.|++.+++|.|.|.+++++++.+... ............ .+ ...|+...  ..+.+..+
T Consensus        54 ~k~~~~i~~~~~~v~~~~~~d~e~~~~Wd~~~~~~~ile~~~~~~-~i~~~~~~~~~~~~vs~RD~v~~~~~~~~~~~~~  132 (214)
T d1em2a_          54 FILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNT-LISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYL  132 (214)
T ss_dssp             EEEEEEESSCHHHHHHHTTTCHHHHTTTCTTEEEEEEEEEETTTE-EEEEEEECCBTTTTBCCEEEEEEEEEEECSSEEE
T ss_pred             EEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHEEEEEECCCCC-EEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEE
T ss_conf             999999918999999999859587988887776458889817996-0899995366888777848999999997599099


Q ss_pred             EEEECCC--------CC--EEEEEEEEEEEECCC--CCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9631245--------41--021137999998799--81899999998508878999999999999999999999999977
Q gi|254780677|r   79 IAVKHIK--------NL--FNFLENHWHFEEISE--SKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEERAHKI  146 (152)
Q Consensus        79 i~~~~~~--------g~--f~~~~g~W~f~~~~~--~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra~~~  146 (152)
                      +...+..        |.  .....+.|.|+|.++  +.|+|++.+..+++..+...+++.++....-.+++++.++.+++
T Consensus       133 ~~~~s~~~~~~p~~~~~vR~~~~~~~~~i~p~~~~~~~t~vt~~~~~Dp~G~iP~~lvn~~~~~~~~~~~~~Lrk~~~k~  212 (214)
T d1em2a_         133 SSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLRQRISEL  212 (214)
T ss_dssp             EEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEEECEECCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99994035543677872999997666999987788980899999970889978799999999986999999999999985


No 10 
>d1jssa_ d.129.3.2 (A:) Cholesterol-regulated Start protein 4 (Stard4). {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.86  E-value=8.1e-08  Score=67.45  Aligned_cols=139  Identities=10%  Similarity=0.108  Sum_probs=94.1

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEEC-CCE-E-EEEEE-EEEECCCCCEE
Q ss_conf             24899983598799999987574231018752057999726888841999999962-312-6-89998-88615766208
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTIN-YAC-M-QREFM-TQVRINQKEHY   78 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~-~~~-~-~~~~~-s~~~~~~~~~~   78 (152)
                      .++.+.+|++|++++++++.|.+.+++|.|.|.+++++++.+... ..+. .+.-. ..+ . ...|+ .+.....++..
T Consensus        45 ~~r~~~~i~~~~~~v~~~l~d~~~~~~Wd~~~~~~~~le~~~~~~-~i~~-~~~~~~~~~~v~~RD~v~~~~~~~~~~~~  122 (199)
T d1jssa_          45 LYKAQGVMDDVVNNVIDHIRPGPWRLDWDRLMTSLDVLEHFEENC-CVMR-YTTAGQLLNIISPREFVDFSYTVGYEEGL  122 (199)
T ss_dssp             EEEEEEEESSCHHHHHHHHSSSTTHHHHCSSEEEEEEEEECSTTE-EEEE-EEECCBTTTTBCCEEEEEEEEEEEETTEE
T ss_pred             EEEEEEEECCCHHHHHHHHHCHHHHHHCCCCHHEEEEEEECCCCC-EEEE-EEECCCCCCCCCCCEEEEEEEEEECCCCE
T ss_conf             999999967999999998839555530055512199999728993-9999-99833478876870899999999869957


Q ss_pred             EEEEC--CC-----CC--EEEEEEEEEEEECCCC--CEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             96312--45-----41--0211379999987998--1899999998508878999999999999999999999999
Q gi|254780677|r   79 IAVKH--IK-----NL--FNFLENHWHFEEISES--KCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEERA  143 (152)
Q Consensus        79 i~~~~--~~-----g~--f~~~~g~W~f~~~~~~--~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra  143 (152)
                      +....  ..     |-  ...+.+.|.|+|+++|  .|+|++.+..+++..+...+++.++....-..+++++++.
T Consensus       123 ~~~~~~~~~~p~~~~~VR~~~~~~~~~i~p~~~~~~~t~vt~~~~~Dp~G~iP~~lvn~~~~~~~~~~~~~Lr~~l  198 (199)
T d1jssa_         123 LSCGVSVEWSETRPEFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQTDLRGMIPQSAVDTAMASTLANFYSDLRKGL  198 (199)
T ss_dssp             EEEEEECCCCCCCTTSEECEECSEEEEEEEETTEEEEEEEEEEECEECCSCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999853878999846987996114899986899870899999972889877299999999987999999999861


No 11 
>d1ln1a_ d.129.3.2 (A:) Phosphatidylcholine transfer protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79  E-value=2.9e-07  Score=63.92  Aligned_cols=140  Identities=10%  Similarity=0.134  Sum_probs=95.0

Q ss_pred             CEEEEEEEC-CCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEE-EE---CCCCC-
Q ss_conf             248999835-9879999998757423101875205799972688884199999996231268999888-61---57662-
Q gi|254780677|r    3 HFTADRIVN-HSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQ-VR---INQKE-   76 (152)
Q Consensus         3 ~~~~~~~i~-~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~-~~---~~~~~-   76 (152)
                      -+..+.+|+ +|++++++++.|++.+++|.|.|.++.  ++... ....+..............|+.. ..   .+... 
T Consensus        46 ~~k~~~~i~~~~~~~~~~~l~d~~~~~~Wd~~~~~~~--~~~~~-~~~i~y~~~~~p~p~~~RD~v~~~~~~~~~~~~~~  122 (203)
T d1ln1a_          46 EYKVFGVLEDCSPTLLADIYMDSDYRKQWDQYVKELY--EQECN-GETVVYWEVKYPFPMSNRDYVYLRQRRDLDMEGRK  122 (203)
T ss_dssp             EEEEEEEETTSCHHHHHHHHHCHHHHHHHCTTEEEEE--EEEET-TEEEEEEEECCCTTSCCEEEEEEEEEEEECSTTCC
T ss_pred             EEEEEEEECCCCHHHHHHHHCCHHHHHHHCCCCEEEE--EECCC-CCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCE
T ss_conf             9999999948999999999729767553235422899--99249-96899998424665677508999999981688972


Q ss_pred             -EEEEEECCC--------CC--EEEEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -089631245--------41--0211379999987998189999999850887899999999999999999999999997
Q gi|254780677|r   77 -HYIAVKHIK--------NL--FNFLENHWHFEEISESKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEERAHK  145 (152)
Q Consensus        77 -~~i~~~~~~--------g~--f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~Ra~~  145 (152)
                       .++...+..        |.  ...+.+.|.|+|.++++|+|++....+++..+...+++.+.+.....++++.++.|.+
T Consensus       123 ~~v~~~~~~~~~~~p~~~~~vR~~~~~~~~~l~~~~~~~t~v~~~~~~Dp~G~iP~~lvn~~~~~~~~~~~~~l~k~~~~  202 (203)
T d1ln1a_         123 IHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKKGSKVFMYYFDNPGGQIPSWLINWAAKNGVPNFLKDMARACQN  202 (203)
T ss_dssp             EEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSSSEEEEEEEEECCSSCCCHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             EEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999532558867146885201046678999815899689999998688986879999999998789999999999864


No 12 
>d1xuva_ d.129.3.5 (A:) Hypothetical protein MM0500 {Methanosarcina mazei [TaxId: 2209]}
Probab=98.50  E-value=2e-05  Score=52.16  Aligned_cols=140  Identities=10%  Similarity=0.067  Sum_probs=76.2

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHCHHHCCC-CCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEE-ECCCCCEEE
Q ss_conf             72489998359879999998757423101875-2057999726888841999999962312689998886-157662089
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSLVSDIERYPEFVPL-CKKVVIHERDNYGENEVLVASMTINYACMQREFMTQV-RINQKEHYI   79 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~-c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~-~~~~~~~~i   79 (152)
                      +.+.-++.|++|+++||++++|-+.+++|++. .-.+....-+.. .+......+....++ ...+...+ ..+++.++.
T Consensus        12 ~~i~i~r~i~Ap~e~Vw~a~tdpe~l~~W~~p~~~~~~~~~~d~~-~gg~~~~~~~~~~g~-~~~~~g~v~~i~~~~rl~   89 (163)
T d1xuva_          12 QEIIITREFDAPRELVFKAFTDPDLYTQWIGPRGFTTALKIFEPK-NGGSWQYIQKDPEGN-EYAFHGVNHDVTEPERII   89 (163)
T ss_dssp             SEEEEEEEESSCHHHHHHHHHCHHHHTTTCSSTTCEEEEEEECCS-TTCEEEEEEECTTSC-EEEEEEEEEEEETTTEEE
T ss_pred             CEEEEEEEECCCHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEECE-ECCEEEEEEEECCCC-CEEEEEEEEEECCCCEEE
T ss_conf             469999996899999999972968762210899941156501000-074389999805787-057899999945997899


Q ss_pred             -EEECCC--CCEEEEEEEEEEEECCCCCEEEEEEEEEEECCHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -631245--41021137999998799818999999985088789-9999999999999999999999997
Q gi|254780677|r   80 -AVKHIK--NLFNFLENHWHFEEISESKCKVHFSIKYELKNRLF-DMMLKAIFDPSFLSFAKAFEERAHK  145 (152)
Q Consensus        80 -~~~~~~--g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~-~~~~~~~~~~~~~~~i~aF~~Ra~~  145 (152)
                       .+....  ++-......|.|++.++|+|.+++...|  ..+-- +..+..-+...-..+++.+++.+++
T Consensus        90 ~tw~~~~~~~~~~~~~v~~~~e~~~~g~t~~~~~~~~--~~~~~~~~~~~~g~~~GW~~~L~~L~~~le~  157 (163)
T d1xuva_          90 STFEFEGLPEKGHVILDTARFEALPGDRTKLTSHSVF--QTIEDRDGMLQSGMEEGINDSYERLDELLEK  157 (163)
T ss_dssp             EEEEETTSSSSCCCEEEEEEEEEETTTEEEEEEEEEC--SSHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCEEEEEEEEEECCCCEEEEEEECC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9984167888887589999999918972999999717--9878999999988999999999999999984


No 13 
>d2bk0a1 d.129.3.1 (A:2-154) Major allergen api g 1 {Celery (Apium graveolens) [TaxId: 4045]}
Probab=98.38  E-value=1.6e-05  Score=52.81  Aligned_cols=113  Identities=14%  Similarity=0.172  Sum_probs=83.5

Q ss_pred             CCEEEEEEECCCHHHHHHH-HHHHHH-CHHHCCCC-CEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEE-CCCCCE
Q ss_conf             7248999835987999999-875742-31018752-0579997268888419999999623126899988861-576620
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSL-VSDIER-YPEFVPLC-KKVVIHERDNYGENEVLVASMTINYACMQREFMTQVR-INQKEH   77 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~i-V~Dve~-YpeFlP~c-~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~-~~~~~~   77 (152)
                      ..++.+..++.||+++|++ +.|..+ .|+.+|.. ++++| + .+++-+...  .+...-++-...+..|+. .|..++
T Consensus         3 ~t~e~E~~~~v~a~k~~ka~~~d~~~l~Pk~~P~~i~svev-e-GdG~~GsIr--~~~~~~~~~~~~~Kerve~iD~~~~   78 (153)
T d2bk0a1           3 QTHVLELTSSVSAEKIFQGFVIDVDTVLPKAAPGAYKSVEI-K-GDGGPGTLK--IITLPDGGPITTMTLRIDGVNKEAL   78 (153)
T ss_dssp             EEEEEEEEESSCHHHHHHHHTTSHHHHHHHHCGGGCSEEEE-E-SSSSTTCEE--EEECCTTSSCCEEEEEEEEEETTTT
T ss_pred             EEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEE-E-CCCCCCEEE--EEEEECCCCCEEEEEEEEEEECCCC
T ss_conf             59999996257999999988605420266345451669999-8-899997699--9998469542366899999946766


Q ss_pred             EEEEECCCCC-----EEEEEEEEEEEECCCCCEEEEEEEEEEECCH
Q ss_conf             8963124541-----0211379999987998189999999850887
Q gi|254780677|r   78 YIAVKHIKNL-----FNFLENHWHFEEISESKCKVHFSIKYELKNR  118 (152)
Q Consensus        78 ~i~~~~~~g~-----f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~  118 (152)
                      .+.++..+|.     ++.+...+.+.|.++|+|.+..+++|+..+.
T Consensus        79 ~~~y~viEGd~l~~~y~s~~~~~~~~~~~~ggsv~k~t~eYe~~~~  124 (153)
T d2bk0a1          79 TFDYSVIDGDILLGFIESIENHVVLVPTADGGSICKTTAIFHTKGD  124 (153)
T ss_dssp             EEEEEEEESGGGTTTEEEEEEEEEEEECTTSCEEEEEEEEEEESTT
T ss_pred             EEEEEEEECCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEEECCC
T ss_conf             8999999445321657999999998218999707999999998999


No 14 
>d2psoa1 d.129.3.2 (A:908-1104) Star-related lipid transfer protein 13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.37  E-value=3.9e-06  Score=56.72  Aligned_cols=133  Identities=11%  Similarity=0.060  Sum_probs=85.5

Q ss_pred             CCCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEE--ECCCCC--
Q ss_conf             9724899983598799999987574231018752057999726888841999999962312689998886--157662--
Q gi|254780677|r    1 MYHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQV--RINQKE--   76 (152)
Q Consensus         1 M~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~--~~~~~~--   76 (152)
                      ++.++....|+++|+++++.+.+  .-++|.|.|.+++++++.+.. .......+...+..-...++...  ..+.++  
T Consensus        43 ~~~~k~~~~i~a~~~~vl~~~l~--~r~~Wd~~~~~~~~le~~~~~-~~i~y~~~~~p~pvs~RD~v~~~~~~~~~~~~~  119 (197)
T d2psoa1          43 LKLWKASVEVEAPPSVVLNRVLR--ERHLWDEDFVQWKVVETLDRQ-TEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGM  119 (197)
T ss_dssp             CCEEEEEEEESSCHHHHHHHHHH--CGGGTCTTBCCCEEEEEEETT-EEEEEEEECCSSSCCCEEEEEEEEEESCCGGGC
T ss_pred             EEEEEEEEEECCCHHHHHHHHHH--HHHHHHHHHHEEEEEEECCCC-CEEEEEECCCCCCCCCEEEEEEEEEEEECCCCE
T ss_conf             58999999985899999999987--398776441258999991899-799999855887635506999999999579987


Q ss_pred             EEEEEECCCCC---------EEEEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf             08963124541---------0211379999987998189999999850887899999999999999999
Q gi|254780677|r   77 HYIAVKHIKNL---------FNFLENHWHFEEISESKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFA  136 (152)
Q Consensus        77 ~~i~~~~~~g~---------f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i  136 (152)
                      .++...+.+.+         .+.+.+.|.++|.++|.|+|+|.+..++++.+..-+++.+-..++.+++
T Consensus       120 ~~i~~~Sv~~~~~p~~~~VR~~~~~~~~~i~p~~~~~t~vt~~~~~Dp~G~iP~W~~n~~~~~~~~~~~  188 (197)
T d2psoa1         120 CTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVA  188 (197)
T ss_dssp             EEEEEEECCCTTCCCCSSEECCEEEEEEEEEECSTTCEEEEEEEEECCSSSCTTTTTTHHHHHHHHHHH
T ss_pred             EEEEEEECCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             999997035567888884899998132799989999689999999778986746577525789999999


No 15 
>d1txca1 d.129.3.1 (A:1-147) Plant pathogenesis-related protein PR10 {Jicama (Pachyrhizus erosus), SPE-16 [TaxId: 109171]}
Probab=98.28  E-value=0.00012  Score=47.28  Aligned_cols=112  Identities=10%  Similarity=0.081  Sum_probs=79.0

Q ss_pred             CEEEEEEECCCHHHHH-HHHHHHHHCHHHCCC-CCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEE-CCCCCEEE
Q ss_conf             2489998359879999-998757423101875-20579997268888419999999623126899988861-57662089
Q gi|254780677|r    3 HFTADRIVNHSSQQML-SLVSDIERYPEFVPL-CKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVR-INQKEHYI   79 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~-~iV~Dve~YpeFlP~-c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~-~~~~~~~i   79 (152)
                      .++.+..++.||+++| .++.|....|.++|. +.++++++-+ ++-+....-.+..+..  ......|+. .|..+..+
T Consensus         4 ~~~~E~~~~v~a~k~~ka~~~d~~~l~~~~p~~i~s~e~~eGd-g~~GsIr~~~~~~g~~--~~~~kErl~~iD~~~~~~   80 (147)
T d1txca1           4 VFRDETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGN-GGVGTIKKITANEGDK--TSFVLQKVDAIDEANLGY   80 (147)
T ss_dssp             EEEEEEEESSCHHHHHHHHHTTHHHHHHHTTSSEEEEEEEESS-SSTTCEEEEEEEETTE--EEEEEEEEEEEEGGGTEE
T ss_pred             EEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCC-CCCCEEEEEEECCCCC--CEEEEEEEEEECCCCCEE
T ss_conf             9999986268989988755205310760046644461365389-9956499999868986--157999999980677289


Q ss_pred             EEECCCCC-----EEEEEEEEEEEECCCCCEEEEEEEEEEECC
Q ss_conf             63124541-----021137999998799818999999985088
Q gi|254780677|r   80 AVKHIKNL-----FNFLENHWHFEEISESKCKVHFSIKYELKN  117 (152)
Q Consensus        80 ~~~~~~g~-----f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~  117 (152)
                      .++.++|.     ++.....-.+.+.++|+|.|.....|+.++
T Consensus        81 ~y~iiEGd~l~~~~~s~~~~~~~~~~~~ggs~vkw~~~y~~~~  123 (147)
T d1txca1          81 DYSIVGGTGLPESLEKLSFETKVVAGSGGGSISKVTLKFHTKG  123 (147)
T ss_dssp             EEEEEESTTSCTTEEEEEEEEEEEECSTTCEEEEEEEEEEETT
T ss_pred             EEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECC
T ss_conf             9999806766631589999999963899985899999999999


No 16 
>d1icxa_ d.129.3.1 (A:) Plant pathogenesis-related protein PR10 {Yellow lupine (Lupinus luteus) [TaxId: 3873]}
Probab=98.27  E-value=4.2e-05  Score=50.08  Aligned_cols=136  Identities=11%  Similarity=0.095  Sum_probs=93.8

Q ss_pred             CEEEEEEECCCHHHHHHH-HHHHHHC-HHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEE-CCCCCEEE
Q ss_conf             248999835987999999-8757423-10187520579997268888419999999623126899988861-57662089
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSL-VSDIERY-PEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVR-INQKEHYI   79 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~i-V~Dve~Y-peFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~-~~~~~~~i   79 (152)
                      .++.+...+.||+++|.+ +.|..+. |..+|..+++++++=+ ++-+......  .+-++-......|+. .|..+..+
T Consensus         4 t~~~E~~~~v~a~klfka~~~d~~~l~pk~~~~i~s~e~~eGd-Gg~GsIk~~~--~~~~~~~~~~Kerie~iD~en~~~   80 (155)
T d1icxa_           4 AFENEQSSTVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGN-GGPGTIKKII--AIHDGHTSFVLHKLDAIDEANLTY   80 (155)
T ss_dssp             EEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTEEEEEEEESS-SSTTCEEEEE--EESSSSEEEEEEEEEEEEGGGTEE
T ss_pred             EEEEEEEECCCHHHHHHHHEECCCHHCHHHHHHEEEEEEECCC-CCCCEEEEEE--ECCCCCEEEEEEEEEEECCCCCEE
T ss_conf             9987577058989986632105111031441011522576178-8620499999--625886079999999872521389


Q ss_pred             EEECCCCC-----EEEEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             63124541-----021137999998799818999999985088789999999999999999999999
Q gi|254780677|r   80 AVKHIKNL-----FNFLENHWHFEEISESKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEE  141 (152)
Q Consensus        80 ~~~~~~g~-----f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~  141 (152)
                      .+..++|.     ++.....-.|.+.++|+|.+..+++|+..+.....--....+..+..|.+|.++
T Consensus        81 ~y~viEGd~l~~~~~~~~~~~k~~~~~~~g~i~k~t~eYe~~g~~~~e~~~~~~ke~~~~~fK~iE~  147 (155)
T d1icxa_          81 NYSIIGGEGLDESLEKISYESKILPGPDGGSIGKINVKFHTKGDVLSETVRDQAKFKGLGLFKAIEG  147 (155)
T ss_dssp             EEEEEEETTSCTTEEEEEEEEEEEECGGGCEEEEEEEEEEESSSSCCHHHHTTHHHHHHHHHHHHHH
T ss_pred             EEEEEECCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999965445563799999999962899972899999999779878812578899999989999999


No 17 
>d1xdfa1 d.129.3.1 (A:1-157) Plant pathogenesis-related protein PR10 {Yellow lupine (Lupinus luteus) [TaxId: 3873]}
Probab=98.14  E-value=0.00021  Score=45.66  Aligned_cols=113  Identities=11%  Similarity=0.137  Sum_probs=86.5

Q ss_pred             CEEEEEEECCCHHHHHHH-HHHHHHC-HHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEE-CCCCCEEE
Q ss_conf             248999835987999999-8757423-10187520579997268888419999999623126899988861-57662089
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSL-VSDIERY-PEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVR-INQKEHYI   79 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~i-V~Dve~Y-peFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~-~~~~~~~i   79 (152)
                      .++.+..++.||+++|.+ +.|...- |...|.++++++++-+ ++-+......+..+  +-......|+. .|..+..+
T Consensus         4 t~~~E~~~~v~a~k~fka~~~d~~~l~pk~p~~i~s~e~~eGd-G~~GsIr~~~~~~g--~~~~~~Kerie~vD~e~~~~   80 (157)
T d1xdfa1           4 TFEDESTSTIAPARLYKALVKDADAIIPKAVEAIQSIETVEGN-GGPGTIKKLTLIEG--GETKYVLHKIEAVDEANLRY   80 (157)
T ss_dssp             EEEEEEEESSCHHHHHHHHHHSHHHHHHHHCTTEEEEEEEESS-SSTTCEEEEEEEET--TEEEEEEEEEEEEEGGGTEE
T ss_pred             EEEEEEECCCCHHHHHHHHHHCHHHCCCCCHHHEECCEEECCC-CCCCCEEEEEECCC--CCCEEEEEEEEEEECHHCEE
T ss_conf             9999986158989999877406001350033225232245489-99886999998379--86279999999870304489


Q ss_pred             EEECCCCC-----EEEEEEEEEEEECCCCCEEEEEEEEEEECCH
Q ss_conf             63124541-----0211379999987998189999999850887
Q gi|254780677|r   80 AVKHIKNL-----FNFLENHWHFEEISESKCKVHFSIKYELKNR  118 (152)
Q Consensus        80 ~~~~~~g~-----f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~  118 (152)
                      .+..++|.     ++.....-.|.+.++|+|.+..+++|+.++.
T Consensus        81 ~y~viEGd~l~~~~~s~~~~~k~~~~~~ggsv~k~t~eYe~~~~  124 (157)
T d1xdfa1          81 NYSIVGGVGLPDTIEKISFETKLVEGANGGSIGKVTIKIETKGD  124 (157)
T ss_dssp             EEEEESSTTSCTTEEEEEEEEEEEECTTSSEEEEEEEEEEESSS
T ss_pred             EEEEEECCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEEECCC
T ss_conf             99999343243638999999999738999669999999999899


No 18 
>d1fm4a_ d.129.3.1 (A:) Major tree pollen allergen {European white birch (Betula pendula), Bet v 1-l [TaxId: 3505]}
Probab=98.05  E-value=0.00011  Score=47.47  Aligned_cols=113  Identities=13%  Similarity=0.205  Sum_probs=80.5

Q ss_pred             CEEEEEEECCCHHHHHHH-HHHHHH-CHHHCCCCC-EEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEE-CCCCCEE
Q ss_conf             248999835987999999-875742-310187520-579997268888419999999623126899988861-5766208
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSL-VSDIER-YPEFVPLCK-KVVIHERDNYGENEVLVASMTINYACMQREFMTQVR-INQKEHY   78 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~i-V~Dve~-YpeFlP~c~-~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~-~~~~~~~   78 (152)
                      .++.+..++.||+++|.+ +.|... .|+.+|... ++++++-+ .+-+...  .+...-++-......|+. .|..++.
T Consensus         4 ~~e~E~~~~v~a~k~~k~~~~d~~~l~pk~~p~~i~~ie~~eGd-g~~GsIr--~~~~~~~~~~~~~Kerve~iD~~~~~   80 (159)
T d1fm4a_           4 NYETEATSVIPAARMFKAFILDGDKLVPKVAPQAISSVENIEGN-GGPGTIK--KINFPEGFPFKYVKDRVDEVDHTNFK   80 (159)
T ss_dssp             EEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECS-SSTTCEE--EEECCTTSSSSEEEEEEEEEETTTTE
T ss_pred             EEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCC-CCCCCEE--EEEECCCCCCEEEEEEEEEECCCCCE
T ss_conf             99877660579899999987074322542168626799997789-9988789--99965899714899999987143258


Q ss_pred             EEEECCCCC-----EEEEEEEEEEEECCCCCEEEEEEEEEEECCH
Q ss_conf             963124541-----0211379999987998189999999850887
Q gi|254780677|r   79 IAVKHIKNL-----FNFLENHWHFEEISESKCKVHFSIKYELKNR  118 (152)
Q Consensus        79 i~~~~~~g~-----f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~  118 (152)
                      +.+..++|.     ++.+...-.|.+.++|+|.+..+++|+.+..
T Consensus        81 ~~y~viEGd~l~~~~~s~~~~~k~~~~~~gg~v~kwt~eYe~~~~  125 (159)
T d1fm4a_          81 YNYSVIEGGPVGDTLEKISNEIKIVATPDGGCVLKISNKYHTKGN  125 (159)
T ss_dssp             EEEEEEEBTTBTTTEEEEEEEEEEEECTTSCEEEEEEEEEEESTT
T ss_pred             EEEEEEECCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEEECCC
T ss_conf             999999166565546899999998538999569999999998899


No 19 
>d2il5a1 d.129.3.5 (A:5-168) Hypothetical protein SA2116 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.02  E-value=0.00054  Score=43.03  Aligned_cols=112  Identities=7%  Similarity=-0.065  Sum_probs=64.6

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCC-CEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEE-ECCCCCEEE
Q ss_conf             724899983598799999987574231018752-057999726888841999999962312689998886-157662089
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSLVSDIERYPEFVPLC-KKVVIHERDNYGENEVLVASMTINYACMQREFMTQV-RINQKEHYI   79 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c-~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~-~~~~~~~~i   79 (152)
                      ..++-++.|++||++||+.++|-+..++|++.- ..+...+-+. ..+......+... .+....+..++ .++++.+ +
T Consensus         7 ~~i~ier~i~Ap~e~Vw~a~tdpe~l~~W~~p~~~~~~~~~~d~-~~Gg~~~~~~~~~-~g~~~~~~g~v~e~~p~~~-i   83 (164)
T d2il5a1           7 VEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADV-KEGGKYRIVDQQR-NGKVNVIEGIYESLVMDEY-V   83 (164)
T ss_dssp             EEEEEEEEESSCHHHHHHHTTCHHHHTTTSSSCTTTEEEEEECC-STTCEEEEEEECG-GGCEEEEEEEEEEEETTTE-E
T ss_pred             EEEEEEEEECCCHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEC-CCCCEEEEEEECC-CCCEEEEEEEEEEECCCCE-E
T ss_conf             78999999779999999997297987275258996124788614-6680699988558-7515778999999758988-9


Q ss_pred             EEE--CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEC
Q ss_conf             631--2454102113799999879981899999998508
Q gi|254780677|r   80 AVK--HIKNLFNFLENHWHFEEISESKCKVHFSIKYELK  116 (152)
Q Consensus        80 ~~~--~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~  116 (152)
                      .+.  ..+.+-......+.|.+..+|+|+|++....-..
T Consensus        84 ~~t~~~~~~~~~~~~~~~~~~e~~~ggT~vt~~~~~~~~  122 (164)
T d2il5a1          84 KMTIGMPGLSETQDVIEVEFFERETGGTQMLFYYRSLVE  122 (164)
T ss_dssp             EEEESCC--CCCCEEEEEEEEECSSSSEEEEEEEEEEEC
T ss_pred             EEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCH
T ss_conf             999852688999659999999828997899999960481


No 20 
>d1xn5a_ d.129.3.5 (A:) Hypothetical protein BH1534 {Bacillus halodurans [TaxId: 86665]}
Probab=97.95  E-value=0.00016  Score=46.39  Aligned_cols=96  Identities=6%  Similarity=-0.013  Sum_probs=61.6

Q ss_pred             CCCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEE
Q ss_conf             97248999835987999999875742310187520579997268888419999999623126899988861576620896
Q gi|254780677|r    1 MYHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIA   80 (152)
Q Consensus         1 M~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~   80 (152)
                      |+.++.++.|++||++||++++|.+.+++|.+.+.-      . .+.+..+..  .-+......++   ...+++.+ +.
T Consensus         4 ~p~i~~~~~i~ap~e~Vw~alt~p~~~~~W~~~~~~------~-~~~g~~~~~--~~~~~~~~g~v---~~~~~~~~-l~   70 (138)
T d1xn5a_           4 LPDIKKEVRFNAPIEKVWEAVSTSEGLAFWFMENDL------K-AETGHHFHL--QSPFGPSPCQV---TDVERPIK-LS   70 (138)
T ss_dssp             CCCEEEEEEESSCHHHHHHHTTSHHHHHTTSCCBCC------C-SCTTCEEEE--ECSSCEEEEEE---EEEETTTE-EE
T ss_pred             CCEEEEEEEECCCHHHHHHHHCCHHHHCEECCCCCC------C-CCCEEEEEE--CCCCCCEEEEE---EEEECCCE-EE
T ss_conf             973999999779999999988098886117557765------4-033045786--27865313899---99707958-99


Q ss_pred             EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEE
Q ss_conf             312454102113799999879981899999998
Q gi|254780677|r   81 VKHIKNLFNFLENHWHFEEISESKCKVHFSIKY  113 (152)
Q Consensus        81 ~~~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~f  113 (152)
                      +....+   .....|+|+|.+ ++|+|++..+-
T Consensus        71 ~~~~~~---~~~v~~~l~~~~-~gT~lt~~~~g   99 (138)
T d1xn5a_          71 FTWDTD---GWSVTFHLKEEE-NGTIFTIVHSG   99 (138)
T ss_dssp             EEETTT---TEEEEEEEEECS-SSEEEEEEEEC
T ss_pred             EEECCC---CEEEEEEEEECC-CCEEEEEEEEC
T ss_conf             996488---759999999859-96999999956


No 21 
>d1z94a1 d.129.3.5 (A:2-144) Hypothetical protein CV1439 {Chromobacterium violaceum [TaxId: 536]}
Probab=97.92  E-value=0.0003  Score=44.61  Aligned_cols=107  Identities=8%  Similarity=0.012  Sum_probs=62.2

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCCCC-CEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEE-CCCCCEEEE
Q ss_conf             24899983598799999987574231018752-0579997268888419999999623126899988861-576620896
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVPLC-KKVVIHERDNYGENEVLVASMTINYACMQREFMTQVR-INQKEHYIA   80 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c-~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~-~~~~~~~i~   80 (152)
                      .++.+++|++||++||+.++|-+...+|++.- ....+.+-+... +..+.......-.|.......++. ++++.+ +.
T Consensus         3 ti~~~r~i~ap~e~Vw~a~Tdp~~~~~W~~p~~~~~~~~~~d~~~-Gg~~~~~~~~~~~g~~~~~~g~v~~~~p~~~-i~   80 (143)
T d1z94a1           3 TIRLHRVLSAPPERVYRAFLDPLALAKWLPPEGFVCKVLEHDARV-GGAYKMEFLAFASGQKHAFGGRYLELVPGER-IR   80 (143)
T ss_dssp             CEEEEEEESSCHHHHHHHTTCHHHHHHHSSCTTEEEEEEEECCST-TCEEEEEEEETTTCCEEEEEEEEEEEETTTE-EE
T ss_pred             EEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCC-CEEEEEEEEECCCCCEEEEEEEEEEECCCEE-EE
T ss_conf             899999988999999998649899766307998301257542302-3469999860899968789999998239969-99


Q ss_pred             EEC--CCCC-EEEEEEEEEEEECCCCCEEEEEEEE
Q ss_conf             312--4541-0211379999987998189999999
Q gi|254780677|r   81 VKH--IKNL-FNFLENHWHFEEISESKCKVHFSIK  112 (152)
Q Consensus        81 ~~~--~~g~-f~~~~g~W~f~~~~~~~t~V~~~l~  112 (152)
                      +..  .++. -....-.|.|++.++ +|+|++...
T Consensus        81 ~t~~~~~~~~~~~~~v~~~l~~~~~-gT~lt~~~~  114 (143)
T d1z94a1          81 YTDRFDDAGLPGDMITTITLAPLSC-GADLSIVQE  114 (143)
T ss_dssp             EEEEESCCC---CEEEEEEEEEETT-EEEEEEEEE
T ss_pred             EEEECCCCCCCCCEEEEEEEEECCC-CEEEEEEEE
T ss_conf             9995168888886899999998299-889999998


No 22 
>d1xfsa_ d.129.3.5 (A:) Hypothetical protein NE0264 {Nitrosomonas europaea [TaxId: 915]}
Probab=97.83  E-value=0.0012  Score=40.89  Aligned_cols=138  Identities=7%  Similarity=-0.065  Sum_probs=71.2

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHCHHHCCC-CCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEE-ECCCCCEEE
Q ss_conf             72489998359879999998757423101875-2057999726888841999999962312689998886-157662089
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSLVSDIERYPEFVPL-CKKVVIHERDNYGENEVLVASMTINYACMQREFMTQV-RINQKEHYI   79 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~-c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~-~~~~~~~~i   79 (152)
                      ..+.-++.|++|+++||+.++|-+.+.+|... --.....+-+..- +..+...+....+ .......++ ..+++.+..
T Consensus         5 ~~l~i~r~i~ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~~~-GG~~~~~~~~~~g-~~~~~~g~v~ei~p~~rl~   82 (165)
T d1xfsa_           5 LDLMLKRELAVPVNLVWRGLTEPELLKKWFVPKPWSISDCRVDLRP-GGEFYTVMQDPEG-NKFPNSGCFLEVTDEKRLI   82 (165)
T ss_dssp             TEEEEEEEESSCHHHHHHHHHCHHHHTTTSSCTTCEEEEEEECCST-TCEEEEEEECTTC-CEEEEEEEEEEEETTTEEE
T ss_pred             CEEEEEEEECCCHHHHHHHHCCHHHHHHCCCCCCCCCEEECCCCEE-CCEEEEEEECCCC-CEEEEEEEEEEECCCCEEE
T ss_conf             0899999976999999999759899832178999521563135250-8518999987999-6666799999824994899


Q ss_pred             EEE-C--------------CCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             631-2--------------4541021137999998799818999999985088789-99999999999999999999999
Q gi|254780677|r   80 AVK-H--------------IKNLFNFLENHWHFEEISESKCKVHFSIKYELKNRLF-DMMLKAIFDPSFLSFAKAFEERA  143 (152)
Q Consensus        80 ~~~-~--------------~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~-~~~~~~~~~~~~~~~i~aF~~Ra  143 (152)
                      ... .              ...........|.|++.+ ++|+|++...+.  ++-- ......-+...-..+++.+++.+
T Consensus        83 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~-~gT~lt~~~~~~--~~~~~~~~~~~g~~~GW~~~l~~L~~~l  159 (165)
T d1xfsa_          83 WTSALVKNYRPAVPATTSDKECAHIVMTAVIELQPTS-SGTRYTACAMHN--TPGQRKLHEEMGFHEGWGTTITQLEELL  159 (165)
T ss_dssp             EESSEEGGGEECCC-----------CCEEEEEEEECS-SSEEEEEEEECS--SHHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC-CCEEEEEEEECC--CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9985056656555544456677786479999999769-958999999868--8778899998779999999999999999


Q ss_pred             H
Q ss_conf             9
Q gi|254780677|r  144 H  144 (152)
Q Consensus       144 ~  144 (152)
                      +
T Consensus       160 e  160 (165)
T d1xfsa_         160 K  160 (165)
T ss_dssp             H
T ss_pred             H
T ss_conf             7


No 23 
>d1e09a_ d.129.3.1 (A:) Major tree pollen allergen {Sweet cherry (Prunus avium), pru av 1 [TaxId: 42229]}
Probab=97.82  E-value=0.0012  Score=40.73  Aligned_cols=112  Identities=12%  Similarity=0.141  Sum_probs=77.5

Q ss_pred             CEEEEEEECCCHHHHHHH-HHHHHHC-HHHCCC-CCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEE-CCCCCEE
Q ss_conf             248999835987999999-8757423-101875-20579997268888419999999623126899988861-5766208
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSL-VSDIERY-PEFVPL-CKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVR-INQKEHY   78 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~i-V~Dve~Y-peFlP~-c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~-~~~~~~~   78 (152)
                      .++.+..++.||+++|.+ +.|..+- |+.+|. .+++++++-+ .+-+......  .+-++-......|+. .|..++.
T Consensus         4 ~~~~E~~~~vpa~k~~k~~~~d~~~l~pk~~p~~i~~ie~~eGd-g~~GsIr~~~--~~~~~~~~~~KErie~iD~~~~~   80 (159)
T d1e09a_           4 TYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGD-GGPGTIKKIT--FGEGSQYGYVKHKIDSIDKENYS   80 (159)
T ss_dssp             EEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESS-SSTTCEEEEE--ECCSSSCEEEEEEEEEEETTTTE
T ss_pred             EEEEEEEECCCHHHHHHHHHCCHHHCCCCCCCCCEEEEEEECCC-CCCCCEEEEE--ECCCCCCEEEEEEEEEECCCCCE
T ss_conf             99987760589899999875081020712077642589887689-9968299999--84899727999999998153268


Q ss_pred             EEEECCCCCE-----EEEEEEEEEEECCCCCEEEEEEEEEEECC
Q ss_conf             9631245410-----21137999998799818999999985088
Q gi|254780677|r   79 IAVKHIKNLF-----NFLENHWHFEEISESKCKVHFSIKYELKN  117 (152)
Q Consensus        79 i~~~~~~g~f-----~~~~g~W~f~~~~~~~t~V~~~l~fe~~~  117 (152)
                      +.+..++|..     +.....-.+.+.++++|.+..+++|+..+
T Consensus        81 ~~y~viEGd~l~~~~~s~~~~~~~~~~~~~g~vvkwt~eYe~~~  124 (159)
T d1e09a_          81 YSYTLIEGDALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKG  124 (159)
T ss_dssp             EEEEECCCTTTGGGEEEEEEEEEECCCTTSSEEEEEEEEEEECS
T ss_pred             EEEEEEECCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEECC
T ss_conf             99999945556563799999999716999980899999999889


No 24 
>d1xn6a_ d.129.3.5 (A:) Hypothetical protein BC4709 {Bacillus cereus [TaxId: 1396]}
Probab=97.58  E-value=0.00021  Score=45.58  Aligned_cols=96  Identities=11%  Similarity=0.171  Sum_probs=61.4

Q ss_pred             CCCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEE
Q ss_conf             97248999835987999999875742310187520579997268888419999999623126899988861576620896
Q gi|254780677|r    1 MYHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIA   80 (152)
Q Consensus         1 M~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~   80 (152)
                      |+.+..++.|++||++||+.++|-+.+.+|.+.|.   +  +-..|  ..+  .+....+....+++   ..+++.+ +.
T Consensus         7 ~~~i~~~~~i~ap~e~Vw~alTdp~~l~~W~~~~~---~--~~~~G--~~~--~~~~~~g~~~g~v~---~~~p~~~-l~   73 (143)
T d1xn6a_           7 LNDIKQTIVFNASIQKVWSVVSTAEGIASWFMPND---F--VLEVG--HEF--HVQSPFGPSPCKVL---EIDEPNH-LS   73 (143)
T ss_dssp             CCCEEEEEEESSCHHHHHHTTSCSHHHHTTSCCBC---C--CCCTT--CEE--CBCCTTCCCCEEEE---EEETTTE-EE
T ss_pred             CCEEEEEEEECCCHHHHHHHHCCHHHHCEEEECCC---C--CCCCC--CEE--EEECCCCCEEEEEE---EEECCCE-EE
T ss_conf             88089999988999999998608677266733367---6--51367--169--99255552018999---9928958-99


Q ss_pred             EECCCCCEEEEEEEEEEEECCCCCEEEEEEEE
Q ss_conf             31245410211379999987998189999999
Q gi|254780677|r   81 VKHIKNLFNFLENHWHFEEISESKCKVHFSIK  112 (152)
Q Consensus        81 ~~~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~  112 (152)
                      ++-..+.   ..-.|+|++.++|+|+|++...
T Consensus        74 ~tw~~~~---~~v~~~l~~~~~G~T~l~l~h~  102 (143)
T d1xn6a_          74 FSWDTDG---WVVSFDLKDLGDNKTEFTLIHG  102 (143)
T ss_dssp             EEETTTT---EEEEEEEEEEETTEEEEEEEEE
T ss_pred             EEECCCC---CEEEEEEEECCCCCEEEEEEEE
T ss_conf             9974898---4899999976999699999991


No 25 
>d3elia1 d.129.3.5 (A:2-144) Uncharacterized protein SPO3351 {Silicibacter pomeroyi [TaxId: 89184]}
Probab=97.24  E-value=0.0018  Score=39.60  Aligned_cols=113  Identities=9%  Similarity=0.024  Sum_probs=57.8

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCC-CCCEEEEEE-CCCCCCCEEEEEEEEECCCEEEEEEEEE-EECCCCCEEE
Q ss_conf             248999835987999999875742310187-520579997-2688884199999996231268999888-6157662089
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVP-LCKKVVIHE-RDNYGENEVLVASMTINYACMQREFMTQ-VRINQKEHYI   79 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP-~c~~~~v~~-r~~~~~~~~~~a~l~v~~~~~~~~~~s~-~~~~~~~~~i   79 (152)
                      .+.-++.|++||++||+.+.|-+...+|++ ......+.. ..+.+.+......+.-. .|......-+ ...+++.++.
T Consensus         2 el~i~r~i~a~~e~Vw~a~tdp~~l~~W~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~-~g~~~~~~g~v~~~~p~~rl~   80 (143)
T d3elia1           2 DLRLEREFAVAPEALFAWVSDGAKLLQWWGPEGLHVPADQHDLDFTRLGPWFSVMVNG-EGQRYKVSGQVTHVKPPQSVG   80 (143)
T ss_dssp             EEEEEEEESSCHHHHHHHTTCHHHHHHHCSSTTCBCCTTSBCCCCSSSEEEEEEEECT-TCCEEEEEEEEEEEETTTEEE
T ss_pred             EEEEEEEECCCHHHHHHHHCCHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEEECC-CCCEEEEEEEEEECCCCCEEE
T ss_conf             6999999779999999986598897442389983156666787622476279999789-996788899999817997899


Q ss_pred             -EEECCCC-C--EEEEEEEEEEEECCCCCEEEEEEEEEEECCH
Q ss_conf             -6312454-1--0211379999987998189999999850887
Q gi|254780677|r   80 -AVKHIKN-L--FNFLENHWHFEEISESKCKVHFSIKYELKNR  118 (152)
Q Consensus        80 -~~~~~~g-~--f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~  118 (152)
                       .+...+. .  -......|.|+|.+ ++|++++... .+++.
T Consensus        81 ~t~~~~~~~~~~~~~~~vt~~l~~~~-~gT~l~~~~~-~~~~~  121 (143)
T d3elia1          81 FTWGWHDDDDRRGAESHVMFIVEPCA-KGARLILDHR-ELGDD  121 (143)
T ss_dssp             EEEEEECTTSCEEEEEEEEEECCBC---CEEEEEEEE-SCSCH
T ss_pred             EEEEECCCCCCCCCCEEEEEEEEECC-CCEEEEEEEE-CCCCH
T ss_conf             99861678888887589999999769-9799999997-48997


No 26 
>d2nn5a1 d.129.3.5 (A:1-160) Hypothetical protein EF2215 {Enterococcus faecalis [TaxId: 1351]}
Probab=97.18  E-value=0.0081  Score=35.48  Aligned_cols=98  Identities=10%  Similarity=0.080  Sum_probs=61.8

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEEE
Q ss_conf             72489998359879999998757423101875205799972688884199999996231268999888615766208963
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIAV   81 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~~   81 (152)
                      ..++.++.|++||++||+.+.|-+..++|.+....  ..-+  .|  ..+..  ....+....++   ..+++|.+ +.+
T Consensus        12 ~~f~~er~i~ap~e~Vw~AlTdpe~l~~W~~~~~~--~d~~--~G--G~~~~--~~~~~~~~~~v---~~~epp~r-L~~   79 (160)
T d2nn5a1          12 IYFGTERAISASPQTIWRYLTETDKLKQWFPELEI--GELG--VN--GFWRF--ILPDFEETMPF---TDYAEEKY-LGV   79 (160)
T ss_dssp             EEEEEEEEESSCHHHHHHHHHCHHHHHHHCTTEEE--EECS--TT--CEEEE--EETTEEEEEEE---EEEETTTE-EEE
T ss_pred             EEEEEEEEECCCHHHHHHHHCCHHHHHHHCCCCCC--CCCC--CC--CEEEE--ECCCCCCCEEE---EEEECCCE-EEE
T ss_conf             79999999669999999997197889863798776--5556--79--72588--76899854189---99953878-999


Q ss_pred             ECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEC
Q ss_conf             12454102113799999879981899999998508
Q gi|254780677|r   82 KHIKNLFNFLENHWHFEEISESKCKVHFSIKYELK  116 (152)
Q Consensus        82 ~~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~  116 (152)
                      .-.+     -.-.|+|.|.++|+|.+++.-.....
T Consensus        80 tW~~-----~~v~~eL~~~~~~~t~l~l~~~~~~~  109 (160)
T d2nn5a1          80 TWDT-----GIIYFDLKEQAPHQTLLVFSESLPEN  109 (160)
T ss_dssp             EETT-----EEEEEEEEEEETTEEEEEEEEEECTT
T ss_pred             EECC-----CEEEEEEECCCCCEEEEEEEEECCCC
T ss_conf             9468-----55899985178875999999825865


No 27 
>d2k5ga1 d.129.3.5 (A:1-183) Uncharacterized protein BPP1335 {Bordetella parapertussis [TaxId: 519]}
Probab=96.96  E-value=0.013  Score=34.20  Aligned_cols=106  Identities=7%  Similarity=0.037  Sum_probs=58.2

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECC------------CEEEEEEEE-
Q ss_conf             7248999835987999999875742310187520579997268888419999999623------------126899988-
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINY------------ACMQREFMT-   68 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~------------~~~~~~~~s-   68 (152)
                      ..++-++.|++|+++||+.++|-+...+|...+.   +   +. .-+..+...+....            .+....... 
T Consensus        19 ~~l~~er~~~Ap~e~VW~AlTdpe~l~~W~~p~~---~---d~-~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   91 (183)
T d2k5ga1          19 QSIRFERLLPGPIERVWAWLADADKRARWLAGGE---L---PR-QPGQTFELHFNHAALTAETAPARYAQYDRPIVARHT   91 (183)
T ss_dssp             SSEEEEEEESSSSHHHHHHHHCHHHHTTTSCCCC---C---CS-STTCEEEEEECGGGSCCSSCCSSCSGGGSCEEEEEE
T ss_pred             CEEEEEEEECCCHHHHHHHHHCHHHHHHHCCCCC---C---CC-CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf             6699999957999999999709688854158887---5---24-278789999537887532222211367874157899


Q ss_pred             EEECCCCCEEEEEEC-CCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECC
Q ss_conf             861576620896312-4541021137999998799818999999985088
Q gi|254780677|r   69 QVRINQKEHYIAVKH-IKNLFNFLENHWHFEEISESKCKVHFSIKYELKN  117 (152)
Q Consensus        69 ~~~~~~~~~~i~~~~-~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~  117 (152)
                      -..++++.+ +.+.- ..+.-....-.|+|++.+ ++|++++...- +..
T Consensus        92 v~~~~p~~r-l~~tw~~~~~~~~s~v~~~l~~~g-~gT~ltl~~~~-~~~  138 (183)
T d2k5ga1          92 LLRCEPPRV-LALTWGGGAGEAPSEVLFELSEAG-EQVRLVLTHTR-LAD  138 (183)
T ss_dssp             EEEEETTTE-EEEECCCCSSSSCCEEEEEEEECS-SSEEEEEEEEC-CCS
T ss_pred             EEEEECCEE-EEEEECCCCCCCCEEEEEEEEECC-CCEEEEEEEEC-CCC
T ss_conf             999867818-999851688987679999999769-93999999956-898


No 28 
>d1zxfa1 d.129.3.5 (A:1-155) Calicheamicin gene cluster protein CalC {Micromonospora echinospora [TaxId: 1877]}
Probab=96.71  E-value=0.0036  Score=37.71  Aligned_cols=134  Identities=10%  Similarity=0.123  Sum_probs=64.0

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCC------CEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCC
Q ss_conf             724899983598799999987574231018752------05799972688884199999996231268999888615766
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSLVSDIERYPEFVPLC------KKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQK   75 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c------~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~   75 (152)
                      +.++.+++|++|+++||+.++|  ..++|.|.-      .+..+..+   ..+.. ..   ..-.|-...+-.-...+++
T Consensus         4 p~v~~~~~i~Ap~e~Vf~a~te--~~~~Ww~~~~~~~~~~~~~~~~~---~gG~~-~~---~~~dG~~~~~g~v~ei~p~   74 (155)
T d1zxfa1           4 PFVRHSVTVKADRKTAFKTFLE--GFPEWWPNNFRTTKVGAPLGVDK---KGGRW-YE---IDEQGEEHTFGLIRKVDEP   74 (155)
T ss_dssp             SCEEEEEEESSHHHHHHHHHTT--CSSSSSSGGGSTTTTCSSCEEET---TTTEE-EC---CCTTTSCCCCEEEEEEETT
T ss_pred             CEEEEEEEEECCHHHHHHHHHH--HHHHHCCCCCCCCEEEEEEEEEC---CCCEE-EE---ECCCCCEEEEEEEEEEECC
T ss_conf             7599999996999999999773--06752599997724788988667---98669-99---7145321532799999547


Q ss_pred             CEEEEEECCCCC-----EEEEEEEEEEEECCCCCEEEEEEEE-EEECCH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             208963124541-----0211379999987998189999999-850887-899999999999999999999999997
Q gi|254780677|r   76 EHYIAVKHIKNL-----FNFLENHWHFEEISESKCKVHFSIK-YELKNR-LFDMMLKAIFDPSFLSFAKAFEERAHK  145 (152)
Q Consensus        76 ~~~i~~~~~~g~-----f~~~~g~W~f~~~~~~~t~V~~~l~-fe~~~~-~~~~~~~~~~~~~~~~~i~aF~~Ra~~  145 (152)
                      .++.......+.     -....-.|.|++.++++|+|++... |.-... ....+.. -+...-..+++.+++.++.
T Consensus        75 ~rl~~tw~~~~~~~~~~~~~s~v~~~~~~~~~~~T~ltl~h~g~~~~~~~~~~~~~~-~~~~GW~~~L~~L~~~le~  150 (155)
T d1zxfa1          75 DTLVIGWRLNGFGRIDPDNSSEFTVTFVADGQKKTRVDVEHTHFDRMGTKHAKRVRN-GMDKGWPTILQSFQDKIDE  150 (155)
T ss_dssp             TEEEEECCCSSSSSCCCSSCCCEEEEEEEETTTEEEEEEEECSSTTSCHHHHHHHHH-HHTTTHHHHHHHHHHHHHH
T ss_pred             CEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf             079999821786443446545999999861799899999994567666156899986-6645399999999998613


No 29 
>d1vjha_ d.129.3.1 (A:) Hypothetical protein At1G24000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=95.31  E-value=0.093  Score=28.73  Aligned_cols=83  Identities=12%  Similarity=0.203  Sum_probs=59.5

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEEEEC
Q ss_conf             48999835987999999875742310187520579997268888419999999623126899988861576620896312
Q gi|254780677|r    4 FTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIAVKH   83 (152)
Q Consensus         4 ~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~~~~   83 (152)
                      .+.+.-|.+|+++.|.+..|....    ||.+.+                         +++.  + ..|..+..+.+..
T Consensus         7 l~~eveik~~a~kf~~~~~~~~~~----~~~~~~-------------------------KerV--e-~vD~en~sity~v   54 (120)
T d1vjha_           7 LSVKFDVKCPADKFFSAFVEDTNR----PFEKNG-------------------------KTEI--E-AVDLVKKTMTIQM   54 (120)
T ss_dssp             EEEEEEESSCHHHHHHHHHHHTTS----CSSTTC-------------------------EEEE--E-EEETTTTEEEEEE
T ss_pred             EEEEEEECCCHHHHHHHHHHCCCC----CCCCCC-------------------------EEEE--E-EECCCCCEEEEEE
T ss_conf             999997058899999986622579----977654-------------------------7999--9-9958788899999


Q ss_pred             CCCC----EEEEEEEEEEEECCCC-CEEEEEEEEEEECCH
Q ss_conf             4541----0211379999987998-189999999850887
Q gi|254780677|r   84 IKNL----FNFLENHWHFEEISES-KCKVHFSIKYELKNR  118 (152)
Q Consensus        84 ~~g~----f~~~~g~W~f~~~~~~-~t~V~~~l~fe~~~~  118 (152)
                      ++|.    ++.+.+...|.|.++| +|.+..+++||-.+.
T Consensus        55 ieGdvl~~yksf~~~i~~~p~~~g~gsi~kwt~eYek~~~   94 (120)
T d1vjha_          55 SGSEIQKYFKTLKGSIAVTPIGVGDGSHVVWTFHFEKVHK   94 (120)
T ss_dssp             ECTTGGGTEEEEEEEEEEEECSSSSCEEEEEEEEEEESST
T ss_pred             EEECCCCCEEEEEEEEEEEECCCCCCEEEEEEEEEEECCC
T ss_conf             9001210313789999999668999649999999996899


No 30 
>d1x53a1 d.129.3.5 (A:8-139) Activator of 90 kda heat shock protein ATPase homolog 1, AHSA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.19  E-value=0.024  Score=32.47  Aligned_cols=97  Identities=10%  Similarity=0.102  Sum_probs=58.3

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEE-EEE
Q ss_conf             2489998359879999998757423101875205799972688884199999996231268999888615766208-963
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHY-IAV   81 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~-i~~   81 (152)
                      +++.++.+++||++||+.+.|-+....|..  ..+++.-+ ++|. ..+      ..+...-++.   ..+++.++ ..|
T Consensus         5 ~i~~~r~~~ap~e~Vw~a~tdpe~l~~W~~--~~~~~d~~-~Gg~-f~~------~~g~~~G~~~---ev~p~~rlv~tw   71 (132)
T d1x53a1           5 KITLKETFLTSPEELYRVFTTQELVQAFTH--APATLEAD-RGGK-FHM------VDGNVSGEFT---DLVPEKHIVMKW   71 (132)
T ss_dssp             EEEEEEEESSCHHHHHHHTTCHHHHHHHSC--SCCBCCCS-TTCC-CBB------TTTTEECCEE---EEETTTEEEEEE
T ss_pred             EEEEEEEECCCHHHHHHHHCCHHHHHHHHC--CCCCCCCC-CCCE-EEE------EECCEEEEEE---EEECCCEEEEEE
T ss_conf             999999978999999999749999974407--75313455-6977-899------8335069999---990798899997


Q ss_pred             ECCCCCE-EEEEEEEEEEECCCCCEEEEEEEEE
Q ss_conf             1245410-2113799999879981899999998
Q gi|254780677|r   82 KHIKNLF-NFLENHWHFEEISESKCKVHFSIKY  113 (152)
Q Consensus        82 ~~~~g~f-~~~~g~W~f~~~~~~~t~V~~~l~f  113 (152)
                      ...+.+- ....-.|.|++.+ ++|++++...-
T Consensus        72 ~~~~~~~~~~s~vt~~l~~~~-~~T~l~l~~~g  103 (132)
T d1x53a1          72 RFKSWPEGHFATITLTFIDKN-GETELCMEGRG  103 (132)
T ss_dssp             EETTSCTTCCEEEEEECCBCS-SCEEEEEEEEE
T ss_pred             ECCCCCCCCCEEEEEEEEECC-CCEEEEEEEEC
T ss_conf             428888887689999999879-94999999988


No 31 
>d2ffsa1 d.129.3.7 (A:1-151) Hypothetical protein PA1206 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=48.25  E-value=7.6  Score=16.49  Aligned_cols=106  Identities=15%  Similarity=0.020  Sum_probs=60.8

Q ss_pred             CEEEEEEECCC---------HHHHHH-HHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEEC
Q ss_conf             24899983598---------799999-98757423101875205799972688884199999996231268999888615
Q gi|254780677|r    3 HFTADRIVNHS---------SQQMLS-LVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRI   72 (152)
Q Consensus         3 ~~~~~~~i~~~---------~e~i~~-iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~   72 (152)
                      ++++..-||-|         .+|+|. |+.-+++=..|+|+..+++|++++++    .+.-++.++.+-    ..-++++
T Consensus         2 ~feHlv~IN~p~~p~~p~LTr~QlW~GL~lrar~p~~Fv~~l~~c~v~~~~~~----~~~Rel~fg~~~----v~e~Vtl   73 (151)
T d2ffsa1           2 QFEHLVQVNDRTLVDLPVLDRLQLWEGLVCRAREPQYFVVGLERFEILVDDGD----RLHRRLYLPGLV----VEDEVVL   73 (151)
T ss_dssp             CEEEEEECCCCCC---CCCCHHHHHHHHHHHHHCGGGTCTTCCEEEEEEECSS----EEEEEEEETTEE----EEEEEEE
T ss_pred             CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCC----EEEEEEEECCCE----EEEEEEE
T ss_conf             61577851799998777658999997889815687565010336999980398----199999987965----6888997


Q ss_pred             CCCCEEEEEE-CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECC
Q ss_conf             7662089631-24541021137999998799818999999985088
Q gi|254780677|r   73 NQKEHYIAVK-HIKNLFNFLENHWHFEEISESKCKVHFSIKYELKN  117 (152)
Q Consensus        73 ~~~~~~i~~~-~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~  117 (152)
                      .++.++ .+. ...|....-.-.=.+++.++|.=-++|..+-.++.
T Consensus        74 ~~~~~v-~f~~~a~~~~~g~~l~~~Ieep~~g~L~lrf~Ye~~~p~  118 (151)
T d2ffsa1          74 KAPDSA-HYSIKPSAEVAGGSLDMTIEEPEPGSLFVRFAYCTRYLQ  118 (151)
T ss_dssp             ETTTEE-EEEECCCSSSBEEEEEEEEEEEETTEEEEEEEEEEECSC
T ss_pred             CCCCEE-EEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCC
T ss_conf             488489-998046567788579999802899809999999748999


Done!