RPSBLAST alignment for GI: 254780677 and conserved domain: cd07812
>gnl|CDD|176854 cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket; they bind diverse ligands. Included in this superfamily are the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, and the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), as well as the SRPBCC domains of phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of this superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins. Length = 141
Score = 46.9 bits (111), Expect = 2e-06
Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 7/144 (4%)
Query: 4 FTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQ 63
A + + + L+SD ER+PE+ P ++V + G V +
Sbjct: 1 VEASIEIPAPPEAVWDLLSDPERWPEWSPGLERVEVLGGGEGGVGARFVGGRK---GGRR 57
Query: 64 REFMTQVRINQKEHYIAVKHIKNLFNF-LENHWHFEEISESKCKVHFSIKYELKN---RL 119
++V + W E + +V ++++Y+ ++
Sbjct: 58 LTLTSEVTEVDPPRPGRFRVTGGGGGVDGTGEWRLEPEGDGGTRVTYTVEYDPPGPLLKV 117
Query: 120 FDMMLKAIFDPSFLSFAKAFEERA 143
F ++L + +A + R
Sbjct: 118 FALLLAGALKRELAALLRALKARL 141