HHsearch alignment for GI: 254780680 and conserved domain: COG0173
>COG0173 AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=96.04 E-value=0.034 Score=37.05 Aligned_cols=179 Identities=20% Similarity=0.306 Sum_probs=103.7
Q ss_pred CCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHH----CCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHH
Q ss_conf 225881122113555402420001565665666211220221----1731000112221675301056488999999999
Q gi|254780680|r 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA----LGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 (430)
Q Consensus 106 PNi~~~~VP~G~de~dNv~i~~~G~~~~f~f~~k~H~elge~----l~liDfe~a~kvsGsrF~~Lkg~~A~Le~ALi~y 181 (430)
T Consensus 81 e~~~N~~l~TGeiEv~a~~i~vln~s~~lPf~i~d~~~~~Ee~RLkYRyLDLRR~~---------m~~~l-~lR~kv~~~ 150 (585)
T COG0173 81 EGTINPNLPTGEIEVLAEEIEVLNASKTLPFQIEDETNASEEIRLKYRYLDLRRPE---------MQKNL-KLRSKVTKA 150 (585)
T ss_pred CCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHH---------HHHHH-HHHHHHHHH
T ss_conf 55668888861499996268998647889947788888652220244555636888---------99999-999999999
Q ss_pred HHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHH---HHHH-CCEECCCCCCHHHHHHHHHCCCHHHHCCEEEEE
Q ss_conf 998622320320212356202788986551422476776---4310-002313454114544534205955504208853
Q gi|254780680|r 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---CTTD-GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTL 257 (430)
Q Consensus 182 ~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y---~~~d-~l~Li~TaEvpL~~~~~~~~l~~~~LPik~~~~ 257 (430)
T Consensus 151 iR~~-ld~~gF~EiETPiLtkST--------PEGARDfLVPSRv~~G~FYALPQSPQlfK-----QLLMvsG-fdRYyQI 215 (585)
T COG0173 151 IRNF-LDDQGFLEIETPILTKST--------PEGARDFLVPSRVHPGKFYALPQSPQLFK-----QLLMVAG-FDRYYQI 215 (585)
T ss_pred HHHH-HHHCCCEEEECCCCCCCC--------CCCCCCCCCCCCCCCCCEEECCCCHHHHH-----HHHHHHC-CCCEEEE
T ss_conf 9997-765498573467414679--------86554430134558996530688879999-----9998805-3300235
Q ss_pred ECCCCCCCCCCCCCCCCEEEEEEEEEEEE-EECCCCCCHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 22107884335543432122221020021-212786501457898999999999984106
Q gi|254780680|r 258 APSFRSEAGSAGRDTRGMLRQHQFWKCEL-VSITREEDSFTEHERMLSCAEEILKRLDLH 316 (430)
Q Consensus 258 s~cfR~EaGs~GkdtrGl~RvHQF~KVE~-~~~~~pe~S~~~~e~~~~~~~~i~~~L~lp 316 (430)
T Consensus 216 arCFRDED------lR-aDRQPEFTQiD~EmSF~~~edv~~~~E~l~~~vf~~~~~i~l~ 268 (585)
T COG0173 216 ARCFRDED------LR-ADRQPEFTQIDLEMSFVDEEDVMELIEKLLRYVFKEVKGIELK 268 (585)
T ss_pred EEEECCCC------CC-CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 65404664------44-4468753367677643889999999999999999985097548