HHsearch alignment for GI: 254780680 and conserved domain: PRK00037

>PRK00037 hisS histidyl-tRNA synthetase; Reviewed.
Probab=98.66  E-value=1.4e-07  Score=77.05  Aligned_cols=155  Identities=17%  Similarity=0.246  Sum_probs=109.0

Q ss_pred             CCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHH-HHHCH-HHHHHHHHHH----HCCEECCCCCCHH
Q ss_conf             5301056488999999999998622320320212356202788986-55142-2476776431----0002313454114
Q gi|254780680|r  163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG-TGQIP-KFADDMFCTT----DGRWLIPTSEVSL  236 (430)
Q Consensus       163 rF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~g-tG~lp-~f~~~~y~~~----d~l~Li~TaEvpL  236 (430)
T Consensus         9 G~rD~lP~~~~~~~~i~~~i~~~-~~~~Gy~~I~tP~lE~~d~~~~~~g~~~d~~~k~~y~f~D~~g~~l~LRpD~T~~i   87 (417)
T PRK00037          9 GTRDILPEESAKWQYVEDTIREV-FERYGFSEIRTPIFEYTELFKRKIGESTDIVEKEMYTFQDKGGRSLTLRPEGTAPV   87 (417)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHH-HHHCCCEEEECCCCCHHHHHCCCCCCCCCHHHHHEEEEECCCCCEEEECCCCCHHH
T ss_conf             87767988999999999999999-99859958577521509886245776322013320567759998898567767299


Q ss_pred             HHHHHHHC-CCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCC-CHHHHHHHHHHHHHHHHHHHC
Q ss_conf             54453420-5955504208853221078843355434321222210200212127865-014578989999999999841
Q gi|254780680|r  237 TNLYSHEI-IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE-DSFTEHERMLSCAEEILKRLD  314 (430)
Q Consensus       237 ~~~~~~~~-l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe-~S~~~~e~~~~~~~~i~~~L~  314 (430)
T Consensus        88 aR~~~~~~~~~~~~~P~r~~y~g~vfR~e~p~-----~G--R~REf~Q~g~eiiG~~~~~aD---aEvi~l~~~~l~~lG  157 (417)
T PRK00037         88 VRAVIENKLYNELPKPFKLYYIGPMFRYERPQ-----KG--RYRQFHQFGVEVIGSDSPAAD---AEVIALAADLLKALG  157 (417)
T ss_pred             HHHHHHHHHHCCCCCCEEEEEECCEEECCCCC-----CC--CCCCEEECCHHHHCCCCHHHH---HHHHHHHHHHHHHCC
T ss_conf             99999721010688765899872466047898-----87--635245635277466417888---999999999999839


Q ss_pred             CHHHHCCCCCHHCCCH
Q ss_conf             0675303780117844
Q gi|254780680|r  315 LHYRVVSLCTGDLGFS  330 (430)
Q Consensus       315 lpyRvv~~~sgdlg~~  330 (430)
T Consensus       158 l~~~~i~i--~~~g~~  171 (417)
T PRK00037        158 LKGLVLLL--NSLGDF  171 (417)
T ss_pred             CCCCCCCC--CCCCCH
T ss_conf             96520010--567768