HHsearch alignment for GI: 254780680 and conserved domain: PRK00037
>PRK00037 hisS histidyl-tRNA synthetase; Reviewed.
Probab=98.66 E-value=1.4e-07 Score=77.05 Aligned_cols=155 Identities=17% Similarity=0.246 Sum_probs=109.0
Q ss_pred CCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHH-HHHCH-HHHHHHHHHH----HCCEECCCCCCHH
Q ss_conf 5301056488999999999998622320320212356202788986-55142-2476776431----0002313454114
Q gi|254780680|r 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG-TGQIP-KFADDMFCTT----DGRWLIPTSEVSL 236 (430)
Q Consensus 163 rF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~g-tG~lp-~f~~~~y~~~----d~l~Li~TaEvpL 236 (430)
T Consensus 9 G~rD~lP~~~~~~~~i~~~i~~~-~~~~Gy~~I~tP~lE~~d~~~~~~g~~~d~~~k~~y~f~D~~g~~l~LRpD~T~~i 87 (417)
T PRK00037 9 GTRDILPEESAKWQYVEDTIREV-FERYGFSEIRTPIFEYTELFKRKIGESTDIVEKEMYTFQDKGGRSLTLRPEGTAPV 87 (417)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH-HHHCCCEEEECCCCCHHHHHCCCCCCCCCHHHHHEEEEECCCCCEEEECCCCCHHH
T ss_conf 87767988999999999999999-99859958577521509886245776322013320567759998898567767299
Q ss_pred HHHHHHHC-CCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCC-CHHHHHHHHHHHHHHHHHHHC
Q ss_conf 54453420-5955504208853221078843355434321222210200212127865-014578989999999999841
Q gi|254780680|r 237 TNLYSHEI-IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE-DSFTEHERMLSCAEEILKRLD 314 (430)
Q Consensus 237 ~~~~~~~~-l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe-~S~~~~e~~~~~~~~i~~~L~ 314 (430)
T Consensus 88 aR~~~~~~~~~~~~~P~r~~y~g~vfR~e~p~-----~G--R~REf~Q~g~eiiG~~~~~aD---aEvi~l~~~~l~~lG 157 (417)
T PRK00037 88 VRAVIENKLYNELPKPFKLYYIGPMFRYERPQ-----KG--RYRQFHQFGVEVIGSDSPAAD---AEVIALAADLLKALG 157 (417)
T ss_pred HHHHHHHHHHCCCCCCEEEEEECCEEECCCCC-----CC--CCCCEEECCHHHHCCCCHHHH---HHHHHHHHHHHHHCC
T ss_conf 99999721010688765899872466047898-----87--635245635277466417888---999999999999839
Q ss_pred CHHHHCCCCCHHCCCH
Q ss_conf 0675303780117844
Q gi|254780680|r 315 LHYRVVSLCTGDLGFS 330 (430)
Q Consensus 315 lpyRvv~~~sgdlg~~ 330 (430)
T Consensus 158 l~~~~i~i--~~~g~~ 171 (417)
T PRK00037 158 LKGLVLLL--NSLGDF 171 (417)
T ss_pred CCCCCCCC--CCCCCH
T ss_conf 96520010--567768