HHsearch alignment for GI: 254780680 and conserved domain: PRK00591
>PRK00591 prfA peptide chain release factor 1; Validated.
Probab=92.86 E-value=0.98 Score=26.21 Aligned_cols=106 Identities=18% Similarity=0.243 Sum_probs=52.7
Q ss_pred HHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 447851999999999846989588999999999999999999999---99999999999986449987999999999999
Q gi|254780680|r 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 (430)
Q Consensus 4 ik~IRen~e~v~~~l~~R~~~~~id~il~Ld~~rr~l~~e~e~Lr---aerN~lSKeIg~~k~~~~~~~~~~Lk~e~~~L 80 (430)
T Consensus 9 Le~l~~rl~eLe~~ls~p~fW~D~~~a~kl~kE~~~L~~~v~~~~~l~~~~~dl~el~-eLl~ee~D~e---l~---e~a 81 (360)
T PRK00591 9 LEALEERYEELEALLSDPEVISDQKRFRKLSKEYAELEPIVEAYREYKQAEEDLEDAK-ELLKEESDPE---MR---EMA 81 (360)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCHH---HH---HHH
T ss_conf 9999999999999872985212999999999999999999999999999999899999-9986279978---99---999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEE
Q ss_conf 9886444666667788877443100225881122113555402420
Q gi|254780680|r 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 (430)
Q Consensus 81 k~eik~le~~~~~le~el~~lll~IPNi~~~~VP~G~de~dNv~i~ 126 (430)
T Consensus 82 ~~El~~l~~~l~~lE~eL~~lLl--p--------~d~~D~~nailE 117 (360)
T PRK00591 82 KEELKELEERLEELEEELKILLL--P--------KDPNDDKNVILE 117 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC--C--------CCCCCCCCEEEE
T ss_conf 99999999999999999999837--9--------997756785899