HHsearch alignment for GI: 254780680 and conserved domain: PRK04173
>PRK04173 glycyl-tRNA synthetase; Provisional.
Probab=99.39 E-value=5.8e-12 Score=109.66 Aligned_cols=255 Identities=18% Similarity=0.272 Sum_probs=188.1
Q ss_pred HHHHCC--CCCEEECCHHHHHHHHHHHHHHHHHHHHC-CCCEEHHHHHCCHHHHHHHHHCHHHHHHHH---------HH-
Q ss_conf 122216--75301056488999999999998622320-320212356202788986551422476776---------43-
Q gi|254780680|r 156 ATKLSG--ARFSVLTGHLAHLERALGQFMIDLHTSEH-GYTEVSAPLLVRDEAMYGTGQIPKFADDMF---------CT- 222 (430)
Q Consensus 156 a~kvsG--srF~~Lkg~~A~Le~ALi~y~ld~~~~~~-Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y---------~~- 222 (430)
T Consensus 22 ssEIYGG~ag~~DyGPlG~~LK~Ni~~~W~~~fv~~~~~~~~id~~ii~~~~V~~ASGHv~~F~D~~v~c~~~~~r~RaD 101 (460)
T PRK04173 22 SSEIYGGLAGFWDYGPLGVELKNNIKKAWWKSFVQERPDVVGIDSPIIMPPEVWKASGHVDNFSDPLVECKKCKKRYRAD 101 (460)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCCCCCEEECCCCCCEECHH
T ss_conf 73003781236155853599999999999999865258778861444489878544677465676234757678363016
Q ss_pred ---HH-------------------------------CC------EE-----C-CCCCCHHHHHHHHH-------------
Q ss_conf ---10-------------------------------00------23-----1-34541145445342-------------
Q gi|254780680|r 223 ---TD-------------------------------GR------WL-----I-PTSEVSLTNLYSHE------------- 243 (430)
Q Consensus 223 ---~d-------------------------------~l------~L-----i-~TaEvpL~~~~~~~------------- 243 (430)
T Consensus 102 ~Lie~~~~~~~~~~~~~~l~~~i~~~~i~cP~cg~~~lt~~~~FNLMF~T~iG~~~~~~~~~YLRPETAQGiFvnFk~v~ 181 (460)
T PRK04173 102 HLIEEYLGIDAEGLSNEELEELIEENNIKCPECGGENWTEVRQFNLMFKTFIGPVEDSSSLGYLRPETAQGIFVNFKNVL 181 (460)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHHHH
T ss_conf 77666532012335899999999970887999999677544312055575135566777502316044104566119999
Q ss_pred CCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCH---HHHC
Q ss_conf 0595550420885322107884335543432122221020021212786501457898999999999984106---7530
Q gi|254780680|r 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH---YRVV 320 (430)
Q Consensus 244 ~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lp---yRvv 320 (430)
T Consensus 182 ~~~r~KlPFgiaQIGKaFRNEIsPr----~~lfR~REFeQmEiE~F~~P~~~~e~~~yw~~~~~~fl~~lGi~~~~lR~r 257 (460)
T PRK04173 182 RTARKKLPFGIAQIGKSFRNEITPR----NFIFRTREFEQMELEFFVKPGTDEEWFAYWIALRKNFLLDLGIDPENLRFR 257 (460)
T ss_pred HHCCCCCCEEEEECCCCCCCCCCCC----CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEE
T ss_conf 9717788804310040012430655----451223455552433105867458999999999999999839988994786
Q ss_pred CCCCHHCCCHHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHH------CCCEEECCCCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 3780117844340241011010048332375310210076453------2684733899841010420043228999999
Q gi|254780680|r 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRR------MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLI 394 (430)
Q Consensus 321 ~~~sgdlg~~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrR------l~iry~~~~~~~~~~~htlNgt~~A~~R~l~ 394 (430)
T Consensus 258 ~h~~~elAHYa~~~~D~E~~~~~--Gw~E~~Gia~RtdyDL~~H~~~Sg~~L~~~d~~~~~k~iPhVIE-pS~GvdR~~l 334 (460)
T PRK04173 258 EHLPEELAHYSKATWDIEYKFPF--GWGELEGIANRTDYDLSRHSKHSGEDLSYFDQETGEKYIPYVIE-PSFGLDRLFL 334 (460)
T ss_pred ECCCHHHCCCCHHHEEEEEECCC--CEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCEECCEEEE-ECCCCCHHHH
T ss_conf 30613420002200558994589--82887664064210278898744887179822558561340564-0467108999
Q ss_pred HHHHHCCCCC----C----CEECCCCCCCCC
Q ss_conf 9988346899----8----386582223101
Q gi|254780680|r 395 AILENYLNAD----G----SVTIPTVLRPYM 417 (430)
Q Consensus 395 ailEn~q~~d----g----~i~iP~~L~pym 417 (430)
T Consensus 335 a~L~~ay~ee~~~~~e~R~vL~l~p~lAPik 365 (460)
T PRK04173 335 AFLEDAYTEEELGDGDKRTVLRLPPALAPVK 365 (460)
T ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCCCCEE
T ss_conf 9998765200047875058996266457716