HHsearch alignment for GI: 254780680 and conserved domain: PRK09194

>PRK09194 prolyl-tRNA synthetase; Provisional.
Probab=99.80  E-value=1.3e-18  Score=159.03  Aligned_cols=193  Identities=23%  Similarity=0.298  Sum_probs=163.4

Q ss_pred             CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHH
Q ss_conf             56566566621122022117310001122216753010564889999999999986223203202123562027889865
Q gi|254780680|r  130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT  209 (430)
Q Consensus       130 ~~~~f~f~~k~H~elge~l~liDfe~a~kvsGsrF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gt  209 (430)
T Consensus        13 e~P~-dae~~Sh-~Ll~raG~Ir~------~~sGiy~~LPlg~rvl~Kie~IIr~-em~~iGa~Ev~mp~l~p~elW~~s   83 (570)
T PRK09194         13 ETPA-DAEVISH-QLMLRAGYIRK------LASGIYTYLPLGLRVLRKIENIVRE-EMNKIGAQEVLMPALQPAELWQES   83 (570)
T ss_pred             CCCC-CCCHHHH-HHHHHCCCCCC------CCCCHHHHHHHHHHHHHHHHHHHHH-HHHHCCCEEEECCCCCCHHHHHHC
T ss_conf             7974-3245669-99987067341------4377255424369999999999999-998649879853567977898761


Q ss_pred             HHCHHHHHHHHHHHH----CCEECCCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf             514224767764310----0023134541145445342059555042088532210788433554343212222102002
Q gi|254780680|r  210 GQIPKFADDMFCTTD----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE  285 (430)
Q Consensus       210 G~lp~f~~~~y~~~d----~l~Li~TaEvpL~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE  285 (430)
T Consensus        84 gR~~~~g~el~r~kDR~~~~~~L~PThEE~it~lv~~~i~SYkqLP~~lYQIqtKfRDE~RP----R~GllR~REF~MKD  159 (570)
T PRK09194         84 GRWEKYGPELLRLKDRHGRDFVLGPTHEEVITDLVRNEIKSYKQLPLNLYQIQTKFRDEIRP----RFGLMRGREFIMKD  159 (570)
T ss_pred             CCHHHCCHHHEEEECCCCCEEEECCCCHHHHHHHHHHHHCCHHHCCHHEECCCCEECCCCCC----CCCCHHHHHHHHHC
T ss_conf             88212361346985278985653787389999999985113764680200132333477887----67623456534512


Q ss_pred             EEECCCC-CCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHCCCHHHEEE
Q ss_conf             1212786-5014578989999999999841067530378011784434024
Q gi|254780680|r  286 LVSITRE-EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY  335 (430)
Q Consensus       286 ~~~~~~p-e~S~~~~e~~~~~~~~i~~~L~lpyRvv~~~sgdlg~~a~~~~  335 (430)
T Consensus       160 aYSFd~~~e~l~~tY~~~~~AY~~IF~rlgL~~~~v~ADsG~iGG~~ShEF  210 (570)
T PRK09194        160 AYSFHADEESLDETYDAMYQAYSRIFTRLGLDFRAVEADSGAIGGSASHEF  210 (570)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEE
T ss_conf             456669989999999999999999999809862999914667588665237