HHsearch alignment for GI: 254780680 and conserved domain: PRK12445
>PRK12445 lysyl-tRNA synthetase; Reviewed.
Probab=95.23 E-value=0.015 Score=39.71 Aligned_cols=117 Identities=19% Similarity=0.330 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCHHHHCC
Q ss_conf 99999999999862232032021235620278898655142247677643100023134541145445342059555042
Q gi|254780680|r 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 (430)
Q Consensus 173 ~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~d~l~Li~TaEvpL~~~~~~~~l~~~~LPi 252 (430)
T Consensus 185 ~~Rs~ii~~iR~~-l~~~gF~EVeTPil--~~~~gGa~Arp-f~t~~~~~~~~~yL~qSPQ-----Lykk~Lmv-gGf-d 253 (505)
T PRK12445 185 VVRSKILAAIRQF-MVARGFMEVETPMM--QVIPGGASARP-FITHHNALDLDMYLRIAPE-----LYLKRLVV-GGF-E 253 (505)
T ss_pred HHHHHHHHHHHHH-HHHCCCEEEECCCC--CCCCCCCCCCE-EEECCCCCCCCEEECCCCH-----HHHHHHHH-CCC-C
T ss_conf 9999999999999-99779389978875--55458766610-3304667886743416939-----99999985-797-4
Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 0885322107884335543432122221020021212786501457898999999999984
Q gi|254780680|r 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 (430)
Q Consensus 253 k~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L 313 (430)
T Consensus 254 RvfeI~r~FRnE----~~~~~---H~PEFT~lE~e------~af~d~~dvm~l~E~li~~i 301 (505)
T PRK12445 254 RVFEINRNFRNE----GISVR---HNPEFTMMELY------MAYADYHDLIELTESLFRTL 301 (505)
T ss_pred CEEEHHHHHHCC----CCCCC---CCHHHHHHHHH------HHCCCHHHHHHHHHHHHHHH
T ss_conf 457627876078----88866---54445435687------63278989999999999999