HHsearch alignment for GI: 254780680 and conserved domain: pfam02403
>pfam02403 Seryl_tRNA_N Seryl-tRNA synthetase N-terminal domain. This domain is found associated with the Pfam tRNA synthetase class II domain (pfam00587) and represents the N-terminal domain of seryl-tRNA synthetase.
Probab=99.82 E-value=5.2e-19 Score=162.03 Aligned_cols=107 Identities=40% Similarity=0.596 Sum_probs=102.4
Q ss_pred CCCHHHHHCCHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 988447851999999999846989-5889999999999999999999999999999999998644998799999999999
Q gi|254780680|r 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 (430)
Q Consensus 1 MLDik~IRen~e~v~~~l~~R~~~-~~id~il~Ld~~rr~l~~e~e~LraerN~lSKeIg~~k~~~~~~~~~~Lk~e~~~ 79 (430)
T Consensus 1 MlDik~ir~n~~~v~~~l~~R~~~~~~~~~i~~ld~~~r~~~~~~e~L~~~~N~~sk~ig~~~~~~~--~~~~l~~~~~~ 78 (108)
T pfam02403 1 MLDIKLIRENPEAVKEKLRKRGVDVLDVDELLELDEERRELQVELEELQAERNELSKEIGKAKKKKE--DAEALIAEVKE 78 (108)
T ss_pred CCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHH
T ss_conf 9888998809999999998829988789999999999999999999999998598999999875774--16889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 998864446666677888774431002258
Q gi|254780680|r 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 (430)
Q Consensus 80 Lk~eik~le~~~~~le~el~~lll~IPNi~ 109 (430)
T Consensus 79 lk~~i~~le~~~~~~e~~l~~~l~~iPNiP 108 (108)
T pfam02403 79 LKDELKALEAELRELEAELDKLLLSIPNIP 108 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999999999999988389999