HHsearch alignment for GI: 254780680 and conserved domain: pfam02403

>pfam02403 Seryl_tRNA_N Seryl-tRNA synthetase N-terminal domain. This domain is found associated with the Pfam tRNA synthetase class II domain (pfam00587) and represents the N-terminal domain of seryl-tRNA synthetase.
Probab=99.82  E-value=5.2e-19  Score=162.03  Aligned_cols=107  Identities=40%  Similarity=0.596  Sum_probs=102.4

Q ss_pred             CCCHHHHHCCHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             988447851999999999846989-5889999999999999999999999999999999998644998799999999999
Q gi|254780680|r    1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST   79 (430)
Q Consensus         1 MLDik~IRen~e~v~~~l~~R~~~-~~id~il~Ld~~rr~l~~e~e~LraerN~lSKeIg~~k~~~~~~~~~~Lk~e~~~   79 (430)
T Consensus         1 MlDik~ir~n~~~v~~~l~~R~~~~~~~~~i~~ld~~~r~~~~~~e~L~~~~N~~sk~ig~~~~~~~--~~~~l~~~~~~   78 (108)
T pfam02403         1 MLDIKLIRENPEAVKEKLRKRGVDVLDVDELLELDEERRELQVELEELQAERNELSKEIGKAKKKKE--DAEALIAEVKE   78 (108)
T ss_pred             CCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHH
T ss_conf             9888998809999999998829988789999999999999999999999998598999999875774--16889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             998864446666677888774431002258
Q gi|254780680|r   80 LKEQLPILEKEEHEVCSSLKKLISCIPNVP  109 (430)
Q Consensus        80 Lk~eik~le~~~~~le~el~~lll~IPNi~  109 (430)
T Consensus        79 lk~~i~~le~~~~~~e~~l~~~l~~iPNiP  108 (108)
T pfam02403        79 LKDELKALEAELRELEAELDKLLLSIPNIP  108 (108)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             999999999999999999999988389999