HHsearch results for GI: 254780680 and protein with PDBid: 1e1o_A
>1e1o_A Lysyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A
Probab=96.80 E-value=0.0012 Score=46.30 Aligned_cols=118 Identities=17% Similarity=0.293 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCH-HHHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCHHH
Q ss_conf 8899999999999862232032021235620278898655142-247677643100023134541145445342059555
Q gi|254780680|r 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP-KFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 (430)
Q Consensus 171 ~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp-~f~~~~y~~~d~l~Li~TaEvpL~~~~~~~~l~~~~ 249 (430)
.-++--.+++.+-++ ..++||++|.||.|.. +-.|.+-.| .+.... -+.+.||.-..+. |....+- ..
T Consensus 182 i~r~Rs~i~~~iR~f-~~~~gFiEVeTPiL~~--~~~ga~~~~~~~~~~~--~~~~~yL~qSpql-----~~q~lm~-~g 250 (504)
T 1e1o_A 182 TFVVRSKILAAIRQF-MVARGFMEVETPMMQV--IPGGASARPFITHHNA--LDLDMYLRIAPEL-----YLKRLVV-GG 250 (504)
T ss_dssp HHHHHHHHHHHHHHH-HHTTTCEECCCCSEES--SCCSSCCCCCEEEETT--TTEEEEECSCSHH-----HHHHHHH-HT
T ss_pred HHHHHHHHHHHHHHH-HHHCCCEEEEECCEEE--ECCCCCCCCEECCCCC--CCCCCCCCCCHHH-----HHHHHHH-HC
T ss_conf 999999999999999-9857967986031254--1487667640005557--8967211558689-----9999986-03
Q ss_pred HCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 0420885322107884335543432122221020021212786501457898999999999984
Q gi|254780680|r 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 (430)
Q Consensus 250 LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L 313 (430)
+ =|+..++||||.| ++ ++| |.-+|+-+|+.. |+..++.+....|++++.+
T Consensus 251 ~-~rvfei~~~FR~E-~~---~tr---H~~EFt~le~e~------af~d~~d~m~~~E~li~~i 300 (504)
T 1e1o_A 251 F-ERVFEINRNFRNE-GI---SVR---HNPEFTMMELYM------AYADYHDLIELTESLFRTL 300 (504)
T ss_dssp C-CEEEEEEEEECCC-CC---CC----CCSEEEEEEEEE------ESCCHHHHHHHHHHHHHHH
T ss_pred C-CHHEEECCEECCC-CC---CCC---CCCCEEEEEEEE------HHCCHHHHHHHHHHHHHHH
T ss_conf 1-1222553015477-67---766---896355533100------2077898999899999999