HHsearch results for GI: 254780680 and protein with PDBid: 1n9w_A

>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1
Probab=95.01  E-value=0.09  Score=32.32  Aligned_cols=110  Identities=22%  Similarity=0.356  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCHHHHCC
Q ss_conf             99999999999862232032021235620278898655142247677643100023134541145445342059555042
Q gi|254780680|r  173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPL  252 (430)
Q Consensus       173 ~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~d~l~Li~TaEvpL~~~~~~~~l~~~~LPi  252 (430)
                      ++--++++.+-++ ..++||.+|.||.++... .+|.++.  |.-+.  .+.+.||.-..|     +| .+.+- .-+ =
T Consensus       126 ~~Rs~i~~~iR~f-~~~~gflEVeTP~l~~~~-~~~~~~~--f~~~~--~~~~~~L~~Spe-----l~-K~l~~-~g~-~  191 (422)
T 1n9w_A          126 KVQAALVRGFRRY-LDRQDFTEIFTPKVVRAG-AEGGSGL--FGVDY--FEKRAYLAQSPQ-----LY-KQIMV-GVF-E  191 (422)
T ss_dssp             HHHHHHHHHHHHH-HHHTTCEECCCC---------------------------------CH-----HH-HHHHH-HHH-S
T ss_pred             HHHHHHHHHHHHH-HHCCCCEECCCCCCCCCC-CCCCCCC--CCCCC--CCCCCCCCCCHH-----HH-HHHHH-CCC-C
T ss_conf             7999999999766-532896713697123577-6667656--78765--688842430879-----98-77763-143-4


Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEE-C-CCCCCHHHHHHHH
Q ss_conf             088532210788433554343212222102002121-2-7865014578989
Q gi|254780680|r  253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS-I-TREEDSFTEHERM  302 (430)
Q Consensus       253 k~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~-~-~~pe~S~~~~e~~  302 (430)
                      |+..+++|||.|-+..   .|   ..-+|+-+|... | .+-++-....|.|
T Consensus       192 rvfei~~~FR~ee~~~---~r---h~~EFt~le~~~a~~~d~~d~~~l~E~~  237 (422)
T 1n9w_A          192 RVYEVAPVWRMEEHHT---SR---HLNEYLSLDVEMGFIADEEDLMRLEEAL  237 (422)
T ss_dssp             EEEEEEEC-------------------CCEEEEEEEESCSSHHHHHHHHHHH
T ss_pred             CCEEECCCCCCCCCCC---CC---CCCHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             1025533212578876---45---6843677887652111398888889999