HHsearch results for GI: 254780680 and protein with PDBid: 1ses_A
>1ses_A Seryl-tRNA synthetase; ligase(synthetase); HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=100.00 E-value=0 Score=1124.72 Aligned_cols=418 Identities=35% Similarity=0.555 Sum_probs=401.7
Q ss_pred CCCHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 98844785199999999984698958899999999999999999999999999999999986449987999999999999
Q gi|254780680|r 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 (430)
Q Consensus 1 MLDik~IRen~e~v~~~l~~R~~~~~id~il~Ld~~rr~l~~e~e~LraerN~lSKeIg~~k~~~~~~~~~~Lk~e~~~L 80 (430)
|||||+||+|||.|+++|++||.++++|+|++||++||+++.++++||++||++||+||+++ .++.+++++++++|
T Consensus 1 MlDik~iR~n~e~v~~~l~~R~~~~dld~ll~Ld~~~r~l~~~~e~l~~~rN~lSK~I~k~k----~~~~~~l~~~~~~l 76 (421)
T 1ses_A 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQVAKRVPKAP----PEEKEALIARGKAL 76 (421)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSC----HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCHHHHHHHHHHH
T ss_conf 98978887599999999986599706899999999999999999999999999999975325----15489999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHC
Q ss_conf 98864446666677888774431002258811221135554024200015656656662112202211731000112221
Q gi|254780680|r 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLS 160 (430)
Q Consensus 81 k~eik~le~~~~~le~el~~lll~IPNi~~~~VP~G~de~dNv~i~~~G~~~~f~f~~k~H~elge~l~liDfe~a~kvs 160 (430)
+++++.+++++++++++++++++.|||+||++||+|.+|++| ++++||.+|.|+|++++|||||+.++++|+ +|+|+|
T Consensus 77 k~~i~~le~~~~~~~~~l~~~ll~IPNlp~~~VP~G~de~~n-~i~~~~~~~~f~f~~k~H~ei~e~l~~~d~-~aakis 154 (421)
T 1ses_A 77 GEEAKRLEEALREKEARLEALLLQVPLPPWPGAPVGGEEANR-EIKRVGGPPEFSFPPLDHVALMEKNGWWEP-RISQVS 154 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCCTTSCSSSGGGCE-EEEEESCCCCCSSCCCCHHHHHHHHTCBCT-THHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CEEECCCCCCCCCCCCCHHHHHHHHHHHHH-HHHHHC
T ss_conf 999999886799998877665302221232211124554433-023215775334122106888888654344-455432
Q ss_pred CCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHH-HHCCEECCCCCCHHHHH
Q ss_conf 67530105648899999999999862232032021235620278898655142247677643-10002313454114544
Q gi|254780680|r 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 (430)
Q Consensus 161 GsrF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~-~d~l~Li~TaEvpL~~~ 239 (430)
|||||||+|+||+|||||+|||+|++. ++||+++.||+|||+++|+||||+|+|++|+|++ ++++||||||||||+||
T Consensus 155 Gsrf~~l~g~~A~LerALi~f~ld~~~-~~gy~e~~~P~lv~~~~~~gtG~lp~f~~d~y~~~~~~l~LipTaEv~l~~~ 233 (421)
T 1ses_A 155 GSRSYALKGDLALYELALLRFAMDFMA-RRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNAL 233 (421)
T ss_dssp CSSCCCEETHHHHHHHHHHHHHHHHHH-HTTCEEEECCSEEEHHHHHHHTCTTTTGGGSCBBTTSSEEECSSTHHHHHHT
T ss_pred CCCHHCCCCCEEEEEHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 411100069557751657899998740-0000023331455677775037886531023443113442102466306766
Q ss_pred HHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECC--CCCCHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 534205955504208853221078843355434321222210200212127--865014578989999999999841067
Q gi|254780680|r 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT--REEDSFTEHERMLSCAEEILKRLDLHY 317 (430)
Q Consensus 240 ~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~--~pe~S~~~~e~~~~~~~~i~~~L~lpy 317 (430)
|+|++++.++||+||+|+|||||+||||||+|||||||||||+|||||++| .|++|+++|++|+.++++||++|+|||
T Consensus 234 ~~~~il~~~~LPlr~~~~s~cfR~EaGs~GkdtrGl~RvhQF~kvE~~~~~~~~~e~s~~~~~~~~~~~~~i~~~L~lpy 313 (421)
T 1ses_A 234 HSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPY 313 (421)
T ss_dssp TTTCEEEGGGCSEEEEEEEEEECCCCSCCCSCCCTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 41555446535732577447532223344521034433102455777786145430246799999999999986226731
Q ss_pred HHCCCCCHHCCCHHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 53037801178443402410110100483323753102100764532684733899841010420043228999999998
Q gi|254780680|r 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 (430)
Q Consensus 318 Rvv~~~sgdlg~~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~iry~~~~~~~~~~~htlNgt~~A~~R~l~ail 397 (430)
|||++||||||++|++||||||||||+++|+||||||||+||||||++|||++++|+ ++||||||||++|+||+|+|||
T Consensus 314 rvv~~~~~dlg~~a~~~~diE~w~P~~~~~~Evss~Sn~~d~qsrrl~i~y~~~~~~-~~~~htlngt~~a~~R~l~ail 392 (421)
T 1ses_A 314 RLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLL 392 (421)
T ss_dssp EEEECCHHHHCTTCSEEEEEEEEETTTTEEEEEEEEEEEETHHHHHHTCEEECTTSC-EEECEEEEEEEEEETHHHHHHH
T ss_pred HHHHCCCCCCCHHHHHHCCEEEEECCCCCEEEEEEECCCCHHHHHHCCCEEECCCCC-EEEEEECCCCCCHHHHHHHHHH
T ss_conf 102227556775876321407886488967878212020038887615878889998-7866872476037889999999
Q ss_pred HHCCCCCCCEECCCCCCCCCCCEEEECCCC
Q ss_conf 834689983865822231018801307334
Q gi|254780680|r 398 ENYLNADGSVTIPTVLRPYMNNLAVIKKEH 427 (430)
Q Consensus 398 En~q~~dg~i~iP~~L~pym~g~~~i~~~~ 427 (430)
||||++||+|.||+|||||| |.++|.|.|
T Consensus 393 E~~q~~dg~v~iP~~L~~ym-g~~~i~p~g 421 (421)
T 1ses_A 393 ENHQLQDGRVRVPQALIPYM-GKEVLEPCG 421 (421)
T ss_dssp HHHBCTTSCEECCGGGHHHH-SSSEECCCC
T ss_pred HHCCCCCCCEECCHHHHCCC-CCCEEEECC
T ss_conf 97358898880881201424-984354087