HHsearch results for GI: 254780680 and protein with PDBid: 1x54_A

>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=96.47  E-value=0.0015  Score=45.50  Aligned_cols=115  Identities=23%  Similarity=0.304  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCHHHH
Q ss_conf             88999999999998622320320212356202788986551422476776431000231345411454453420595550
Q gi|254780680|r  171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSL  250 (430)
Q Consensus       171 ~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~d~l~Li~TaEvpL~~~~~~~~l~~~~L  250 (430)
                      .-++-..+++.+-++ +.++||.+|.||.|+....-.+.-.++.   .  .-+.++||.-..|.     |..-.+.  -+
T Consensus       134 ~~r~Rs~i~~~iR~~-l~~~gF~EVeTP~L~~~~~~g~a~~~~~---~--~~~~~~~L~~spql-----~~k~li~--G~  200 (434)
T 1x54_A          134 IMKVKETLIMAAREW-LLKDGWHEVFPPILVTGAVEGGATLFKL---K--YFDKYAYLSQSAQL-----YLEAAIF--GL  200 (434)
T ss_dssp             HHHHHHHHHHHHHHH-HHHTTCEECCCCSEESCCSSCGGGCCEE---E--ETTEEEEECSCSHH-----HHHHHHH--HH
T ss_pred             HHHHHHHHHHHHHHH-HHHCCEEEEEECEEEEECCCCCCCCCEE---C--CCCCCHHHCCCHHH-----HHHHHHC--CC
T ss_conf             898999999999998-7627849985010255214566666310---1--25603342143666-----6666402--53


Q ss_pred             CCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEC-CCCCCHHHHHHHHHHH
Q ss_conf             420885322107884335543432122221020021212-7865014578989999
Q gi|254780680|r  251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI-TREEDSFTEHERMLSC  305 (430)
Q Consensus       251 Pik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~-~~pe~S~~~~e~~~~~  305 (430)
                       =|+..+++|||.|-+.    +  --...+|+-+|.... .+-++-....|+|+..
T Consensus       201 -~rvfei~~~FR~E~~~----~--~rH~pEFt~lE~y~a~~d~~~~m~~~e~li~~  249 (434)
T 1x54_A          201 -EKVWSLTPSFRAEKSR----T--RRHLTEFWHLELEAAWMDLWDIMKVEEELVSY  249 (434)
T ss_dssp             -SEEEEEEEEECCCCCC----C--SSCCSEEEEEEEEEETCCHHHHHHHHHHHHHH
T ss_pred             -CCEEECCCEECCCCCC----C--CCCCCCEEEECHHHHCCCHHHHHHHHHHHHHH
T ss_conf             -3115424302367666----8--66676534211254238899999999999999