HHsearch results for GI: 254780680 and protein with PDBid: 1x54_A
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=96.47 E-value=0.0015 Score=45.50 Aligned_cols=115 Identities=23% Similarity=0.304 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCHHHH
Q ss_conf 88999999999998622320320212356202788986551422476776431000231345411454453420595550
Q gi|254780680|r 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSL 250 (430)
Q Consensus 171 ~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~d~l~Li~TaEvpL~~~~~~~~l~~~~L 250 (430)
.-++-..+++.+-++ +.++||.+|.||.|+....-.+.-.++. . .-+.++||.-..|. |..-.+. -+
T Consensus 134 ~~r~Rs~i~~~iR~~-l~~~gF~EVeTP~L~~~~~~g~a~~~~~---~--~~~~~~~L~~spql-----~~k~li~--G~ 200 (434)
T 1x54_A 134 IMKVKETLIMAAREW-LLKDGWHEVFPPILVTGAVEGGATLFKL---K--YFDKYAYLSQSAQL-----YLEAAIF--GL 200 (434)
T ss_dssp HHHHHHHHHHHHHHH-HHHTTCEECCCCSEESCCSSCGGGCCEE---E--ETTEEEEECSCSHH-----HHHHHHH--HH
T ss_pred HHHHHHHHHHHHHHH-HHHCCEEEEEECEEEEECCCCCCCCCEE---C--CCCCCHHHCCCHHH-----HHHHHHC--CC
T ss_conf 898999999999998-7627849985010255214566666310---1--25603342143666-----6666402--53
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEC-CCCCCHHHHHHHHHHH
Q ss_conf 420885322107884335543432122221020021212-7865014578989999
Q gi|254780680|r 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI-TREEDSFTEHERMLSC 305 (430)
Q Consensus 251 Pik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~-~~pe~S~~~~e~~~~~ 305 (430)
=|+..+++|||.|-+. + --...+|+-+|.... .+-++-....|+|+..
T Consensus 201 -~rvfei~~~FR~E~~~----~--~rH~pEFt~lE~y~a~~d~~~~m~~~e~li~~ 249 (434)
T 1x54_A 201 -EKVWSLTPSFRAEKSR----T--RRHLTEFWHLELEAAWMDLWDIMKVEEELVSY 249 (434)
T ss_dssp -SEEEEEEEEECCCCCC----C--SSCCSEEEEEEEEEETCCHHHHHHHHHHHHHH
T ss_pred -CCEEECCCEECCCCCC----C--CCCCCCEEEECHHHHCCCHHHHHHHHHHHHHH
T ss_conf -3115424302367666----8--66676534211254238899999999999999