HHsearch results for GI: 254780680 and protein with PDBid: 2du7_A
>2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii}
Probab=97.50 E-value=0.00048 Score=49.17 Aligned_cols=114 Identities=11% Similarity=0.174 Sum_probs=73.3
Q ss_pred HCCCHHHHCCEEEEEECCCCCCCC-CCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCH-HHHC
Q ss_conf 205955504208853221078843-35543432122221020021212786501457898999999999984106-7530
Q gi|254780680|r 243 EIIESKSLPLRFTTLAPSFRSEAG-SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH-YRVV 320 (430)
Q Consensus 243 ~~l~~~~LPik~~~~s~cfR~EaG-s~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lp-yRvv 320 (430)
...+....|+|+.+.++|||+|+- .+ | +.++|+.+|.+++-+ .--+..+....+.+++.|+.. .|+-
T Consensus 209 ~l~e~~~~Pir~~s~GrVyRrD~i~D~---t----H~~~FhQ~Eglvvd~----~vt~~dLK~~L~~f~~~~~~~~~k~R 277 (549)
T 2du7_A 209 SLIKKRKLPLKLFSIDRCFRREQREDR---S----HLMSYHSASCVVVGE----DVSVDDGKVVAEGLLAQFGFTKFKFK 277 (549)
T ss_dssp TTTTTSCSSEEEEEEEEECCCCSSCSS---S----CCSCEEEEEEEEECT----TCCHHHHHHHHHHHHGGGTCCCCCCE
T ss_pred HHHHCCCCCEEEECCCCCCCCCCCCCH---H----HCCCCEEEEEEEECC----CCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 998527998056336654445555642---1----178773777689607----87899999999999999779883898
Q ss_pred CCCCH-HCCCHHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEE
Q ss_conf 37801-1784434024101101004833237531021007645326847
Q gi|254780680|r 321 SLCTG-DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 (430)
Q Consensus 321 ~~~sg-dlg~~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~iry 368 (430)
-.++- ---.| +-..|+.++.|..+.|.||.-|.-..----+..+|-|
T Consensus 278 ~~~syFPfTeP-s~EveV~~~~~~~g~WlEIlGcGmv~P~VL~~~Gid~ 325 (549)
T 2du7_A 278 PDEKKSKYYTP-ETQTEVYAYHPKLGEWIEVATFGVYSPIALAKYNIDV 325 (549)
T ss_dssp ECTTCCTTBCT-TTCEEEEECCSSSSCSEEEEEEEEBCHHHHHHTTCCS
T ss_pred ECCCCCCCCCC-CEEEEEEEEECCCCEEEEEECCCCCCHHHHHHCCCCC
T ss_conf 78888899999-6578999970889818999578477889998569798