HHsearch results for GI: 254780680 and protein with PDBid: 2odr_A
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2}
Probab=97.58 E-value=0.00023 Score=51.50 Aligned_cols=181 Identities=10% Similarity=0.088 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHH---HHCCEECCCCCCHHHHHHHHHCCCHHHHC
Q ss_conf 999999999862232032021235620278898655142247677643---10002313454114544534205955504
Q gi|254780680|r 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLP 251 (430)
Q Consensus 175 e~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~---~d~l~Li~TaEvpL~~~~~~~~l~~~~LP 251 (430)
+..+..+.+-..+...||.++.+..++.++....- ++ .....+.. ..+.-+-=|+=.|-.-.......+....|
T Consensus 148 ~~~~~~~k~r~~l~~~G~~EVitySfvs~~~~~~l--~~-~~~~i~l~NPisSe~svLRThlspgll~~l~~N~~r~~~p 224 (665)
T 2odr_A 148 QKILHGYKKGTLDGDDLVLEISNALEISSEMGLKI--LE-DVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLP 224 (665)
T ss_dssp ---------------------------------------------CCCCCCBCCSEEECCCTHHHHHHHHHHHTTTSCSC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHC--CC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 56766665312221046124542022362443202--56-5552002585531355648887268999999998579998
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHC-CCH
Q ss_conf 2088532210788433554343212222102002121278650145789899999999998410675303780117-844
Q gi|254780680|r 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL-GFS 330 (430)
Q Consensus 252 ik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lpyRvv~~~sgdl-g~~ 330 (430)
+|+...++|||+|+.. |.. ...+|+-+|-+.+-+ .--+..+....+.+++.|+.+---+..-...- -.-
T Consensus 225 lrlFEiGrVFR~D~~~---D~t---Hl~~fhQleGlvvg~----~vdf~DLKg~le~lL~~lg~~~vkfr~~~s~~Pf~h 294 (665)
T 2odr_A 225 FKLFSIDRCFRREQKE---DKS---HLMTYHSASCAIAGE----GVDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYYT 294 (665)
T ss_dssp EEEEEEEEEECCCSCC---CSS---CCSEEEEEEEEEECT----TCCHHHHHHHHHHHHHTTTCCCEEEEECTTCCTTBC
T ss_pred EEEEEEEEEECCCCCC---CCC---CCCEEEEEEEEEECC----CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf 5899777887478755---465---586114899999867----567899999999999996788718996577789989
Q ss_pred HHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEE
Q ss_conf 34024101101004833237531021007645326847
Q gi|254780680|r 331 ACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 (430)
Q Consensus 331 a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~iry 368 (430)
-++.-|+++|-|..+.|.||..|.-.----.+.++|.|
T Consensus 295 Pg~eaeV~~~~~k~~~WlEIgg~G~vhP~VLk~~GId~ 332 (665)
T 2odr_A 295 PETQTEVYAYHPKLKEWLEVATFGVYSPVALSKYGIDV 332 (665)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEEEEBCHHHHHHTTCCS
T ss_pred CCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHCCCCC
T ss_conf 94058999994569839999924430799998769798