HHsearch results for GI: 254780680 and protein with PDBid: 2odr_C

>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2}
Probab=97.39  E-value=0.00045  Score=49.37  Aligned_cols=178  Identities=12%  Similarity=0.148  Sum_probs=103.7

Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHH---H---HHHCCEECCCCCCHHHHHHHHHCCCH
Q ss_conf             99999999998622320320212356202788986551422476776---4---31000231345411454453420595
Q gi|254780680|r  174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---C---TTDGRWLIPTSEVSLTNLYSHEIIES  247 (430)
Q Consensus       174 Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y---~---~~d~l~Li~TaEvpL~~~~~~~~l~~  247 (430)
                      ++..+..+-+-..+...||.++....++.++..      .++.+..+   .   +..++-+.=|+=.|-.........+.
T Consensus       147 ~e~~~~~~k~r~~l~~~G~~EvitySfvd~~~~------~~~~~~~~p~~l~NPisse~sVLRThttpGlL~~l~~n~~r  220 (701)
T 2odr_C          147 LQKILHGYKKGTLDGDDLVLEISNALEISSEMG------LKILEDVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNK  220 (701)
T ss_dssp             -------------------------------------------------CCCCCCEEEEEEECCCTHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH------HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf             356667665301121034102432023472332------00256556200258553014561768746699999999857


Q ss_pred             HHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHC
Q ss_conf             55042088532210788433554343212222102002121278650145789899999999998410675303780117
Q gi|254780680|r  248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL  327 (430)
Q Consensus       248 ~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lpyRvv~~~sgdl  327 (430)
                      ...|+|+...++|||+|+..   |...+   .+|+.+|-+.+-.    .--+..+....+.+++.|+++---+..-...-
T Consensus       221 ~~~piRlFeiGrVFR~D~i~---DatHl---~~FhQ~EGlvvg~----~Vdf~DLKgiLe~lL~~Lg~~~vkfr~~~s~~  290 (701)
T 2odr_C          221 KPLPFKLFSIDRCFRREQKE---DKSHL---MTYHSASCAIAGE----GVDINDGKAIAEGLLSQFGFTNFKFIPDEKKS  290 (701)
T ss_dssp             SCSCEEEEEEEEEECCCSCC---CSSCC---SEEEEEEEEEECT----TCCHHHHHHHHHHHHHTTTCCCEEEEECTTCC
T ss_pred             CCCCEEEEEEEEEEECCCCC---CCCCC---CEEEEEEEEEECC----CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             99984999876667257624---25578---4246789999858----86899999999999999678772999657788


Q ss_pred             C-CHHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCE
Q ss_conf             8-443402410110100483323753102100764532684
Q gi|254780680|r  328 G-FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR  367 (430)
Q Consensus       328 g-~~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~ir  367 (430)
                      . .--++..|+.+|.|..+.|.||..|.-.--=.-+.++|.
T Consensus       291 Pf~hPg~eaeV~~~~~~~~~WlEIgg~GmvhP~VL~~~GId  331 (701)
T 2odr_C          291 KYYTPETQTEVYAYHPKLKEWLEVATFGVYSPVALSKYGID  331 (701)
T ss_dssp             TTBCTTCCEEEEEEETTTTEEEEEEEEEEBCHHHHHHTTCC
T ss_pred             CCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHCCCC
T ss_conf             99899135899999465994899965754079999876979