HHsearch results for GI: 254780680 and protein with PDBid: 2odr_C
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2}
Probab=97.39 E-value=0.00045 Score=49.37 Aligned_cols=178 Identities=12% Similarity=0.148 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHH---H---HHHCCEECCCCCCHHHHHHHHHCCCH
Q ss_conf 99999999998622320320212356202788986551422476776---4---31000231345411454453420595
Q gi|254780680|r 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---C---TTDGRWLIPTSEVSLTNLYSHEIIES 247 (430)
Q Consensus 174 Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y---~---~~d~l~Li~TaEvpL~~~~~~~~l~~ 247 (430)
++..+..+-+-..+...||.++....++.++.. .++.+..+ . +..++-+.=|+=.|-.........+.
T Consensus 147 ~e~~~~~~k~r~~l~~~G~~EvitySfvd~~~~------~~~~~~~~p~~l~NPisse~sVLRThttpGlL~~l~~n~~r 220 (701)
T 2odr_C 147 LQKILHGYKKGTLDGDDLVLEISNALEISSEMG------LKILEDVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNK 220 (701)
T ss_dssp -------------------------------------------------CCCCCCEEEEEEECCCTHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH------HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 356667665301121034102432023472332------00256556200258553014561768746699999999857
Q ss_pred HHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHC
Q ss_conf 55042088532210788433554343212222102002121278650145789899999999998410675303780117
Q gi|254780680|r 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 (430)
Q Consensus 248 ~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lpyRvv~~~sgdl 327 (430)
...|+|+...++|||+|+.. |...+ .+|+.+|-+.+-. .--+..+....+.+++.|+++---+..-...-
T Consensus 221 ~~~piRlFeiGrVFR~D~i~---DatHl---~~FhQ~EGlvvg~----~Vdf~DLKgiLe~lL~~Lg~~~vkfr~~~s~~ 290 (701)
T 2odr_C 221 KPLPFKLFSIDRCFRREQKE---DKSHL---MTYHSASCAIAGE----GVDINDGKAIAEGLLSQFGFTNFKFIPDEKKS 290 (701)
T ss_dssp SCSCEEEEEEEEEECCCSCC---CSSCC---SEEEEEEEEEECT----TCCHHHHHHHHHHHHHTTTCCCEEEEECTTCC
T ss_pred CCCCEEEEEEEEEEECCCCC---CCCCC---CEEEEEEEEEECC----CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 99984999876667257624---25578---4246789999858----86899999999999999678772999657788
Q ss_pred C-CHHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCE
Q ss_conf 8-443402410110100483323753102100764532684
Q gi|254780680|r 328 G-FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 (430)
Q Consensus 328 g-~~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~ir 367 (430)
. .--++..|+.+|.|..+.|.||..|.-.--=.-+.++|.
T Consensus 291 Pf~hPg~eaeV~~~~~~~~~WlEIgg~GmvhP~VL~~~GId 331 (701)
T 2odr_C 291 KYYTPETQTEVYAYHPKLKEWLEVATFGVYSPVALSKYGID 331 (701)
T ss_dssp TTBCTTCCEEEEEEETTTTEEEEEEEEEEBCHHHHHHTTCC
T ss_pred CCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHCCCC
T ss_conf 99899135899999465994899965754079999876979