HHsearch results for GI: 254780680 and protein with PDBid: 2zt5_A
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A
Probab=99.18 E-value=3.1e-10 Score=95.23 Aligned_cols=265 Identities=15% Similarity=0.206 Sum_probs=171.6
Q ss_pred CHHHHCCCCCHHHHHHHCC--CCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHH
Q ss_conf 2022117310001122216--75301056488999999999998622320320212356202788986551422476776
Q gi|254780680|r 143 EIGEALGLMDFDRATKLSG--ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 (430)
Q Consensus 143 elge~l~liDfe~a~kvsG--srF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y 220 (430)
+|.+.-+.+.. +..|=| ||+|-+---|.++-+-+.+..-...+.+-|..+|..|.|...+++..+|++.+|.|-+.
T Consensus 72 ~~~~rr~f~~~--s~~iygg~aG~YdygPlG~~v~~kI~~iwR~emv~~~g~~Ei~~p~l~P~evwkaSGh~~~f~D~~v 149 (693)
T 2zt5_A 72 DTLKRRFFYDQ--AFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMV 149 (693)
T ss_dssp HHHHHTTSEEE--TTGGGTCCTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECCCCSEEEHHHHHHHTHHHHCEEEEE
T ss_pred HHHHHCCCCCC--CCHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCHH
T ss_conf 99874446245--5012153665305335489999999999999985405978953132589899973698522443046
Q ss_pred ---------H----HHHCCEECC---------------------------------------------------------
Q ss_conf ---------4----310002313---------------------------------------------------------
Q gi|254780680|r 221 ---------C----TTDGRWLIP--------------------------------------------------------- 230 (430)
Q Consensus 221 ---------~----~~d~l~Li~--------------------------------------------------------- 230 (430)
. .++.+-.++
T Consensus 150 ~~~~~~~r~RaD~ll~~~~e~~~t~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~ir~p~~g~~~g~~R~refmmk 229 (693)
T 2zt5_A 150 KDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFK 229 (693)
T ss_dssp EBSSSCCEEEHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHTTTTTCCHHHHHHHHHHTTCBCSSSCCBBCCCEEEECCCE
T ss_pred HHCCCCHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 65534533314321167887750205666888888898986342014789999999718989887886554534112554
Q ss_pred ----------------CCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCC
Q ss_conf ----------------4541145445342059555042088532210788433554343212222102002121278650
Q gi|254780680|r 231 ----------------TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 (430)
Q Consensus 231 ----------------TaEvpL~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~ 294 (430)
|+.--..||-+=-.....+||.-.+-.+..||.|.-. -.||+|+..|+-.|+..|+.|++
T Consensus 230 d~~g~~~~~~~~lrpetaq~~f~ay~ri~~~~g~klpf~~AqiG~~frnEi~p----r~gl~R~rEf~~~e~e~F~~p~~ 305 (693)
T 2zt5_A 230 TFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISP----RSGLIRVREFTMAEIEHFVDPSE 305 (693)
T ss_dssp EECSSSSSSEEEECSCSHHHHHTTHHHHHHHTTTCSCEEEEEEEEEECCCSSC----CSGGGSCSEEEEEEEEEEECTTC
T ss_pred ECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC----CEEEECCCCCEEEEEEECCCHHH
T ss_conf 13466641243135468999999999999970888865998536665776666----53342258765888862357214
Q ss_pred HHH------------------------------------------HHHHHHHHHHHHHHHHCCH---HHHCCCCCHHCCC
Q ss_conf 145------------------------------------------7898999999999984106---7530378011784
Q gi|254780680|r 295 SFT------------------------------------------EHERMLSCAEEILKRLDLH---YRVVSLCTGDLGF 329 (430)
Q Consensus 295 S~~------------------------------------------~~e~~~~~~~~i~~~L~lp---yRvv~~~sgdlg~ 329 (430)
... ++...+.....++..++++ .|.......++-.
T Consensus 306 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ti~eav~~g~i~~~~~~~~~~~~~~~l~~~g~~~~~lr~~~~~~~e~a~ 385 (693)
T 2zt5_A 306 KDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAH 385 (693)
T ss_dssp CCCTTGGGTTTCEEEEECHHHHHTTCCCEEEEHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTCCGGGEEEEECCGGGSCT
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHH
T ss_conf 55576765554322435602342478734107999987267248999999999889999707777784431155165555
Q ss_pred HHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHC---------------------------------------------
Q ss_conf 43402410110100483323753102100764532---------------------------------------------
Q gi|254780680|r 330 SACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRM--------------------------------------------- 364 (430)
Q Consensus 330 ~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl--------------------------------------------- 364 (430)
.+..+.|+|.-.| -.|.|+.-+.+-+||--...
T Consensus 386 ya~~~~d~e~~~~--~g~~El~Gia~r~~~dL~~~~~~s~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~f~~d~~~v~~ 463 (693)
T 2zt5_A 386 YACDCWDAESKTS--YGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVME 463 (693)
T ss_dssp TCSSEEEEEEEET--TEEEEEEEEECCCSHHHHHHHHHHTCCCCEEEC--------------------------------
T ss_pred HHHHHHHHHCCCC--CCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH
T ss_conf 5543333112567--77210004223346662344321133123211035765015888724744234331445888874
Q ss_pred -----------------------------------------CCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCC
Q ss_conf -----------------------------------------684733899841010420043228999999998834689
Q gi|254780680|r 365 -----------------------------------------NSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 (430)
Q Consensus 365 -----------------------------------------~iry~~~~~~~~~~~htlNgt~~A~~R~l~ailEn~q~~ 403 (430)
+..+.+.+++ ...+|+. -.+.-|+|+++||+|++-.+
T Consensus 464 ~~~~~d~~~~~~~~~~l~~~~~~~l~~~G~~f~l~~~~~~~~~~~~~~~g~-~~~P~Mg-cyGIGVsRilaAiiEq~~de 541 (693)
T 2zt5_A 464 YLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVE-EVVPNVI-EPSFGLGRIMYTVFEHTFHV 541 (693)
T ss_dssp ------------------------------------------------CCE-EECCEEE-EEEEEHHHHHHHHHHHHEEE
T ss_pred CCCCCCCCCHHHHHCCCCCCCEEEEEECCEEEEECHHHHHHHHHHCCCCCC-EECCEEE-EECCCHHHHHHHHHHHHHHH
T ss_conf 024677521012200113586588732573788544777765540035674-6454689-81367027999999986330
Q ss_pred CCC------EECCCCCCCCC
Q ss_conf 983------86582223101
Q gi|254780680|r 404 DGS------VTIPTVLRPYM 417 (430)
Q Consensus 404 dg~------i~iP~~L~pym 417 (430)
+|- .+.|..+=||=
T Consensus 542 ~gi~e~R~vL~wP~~IAP~k 561 (693)
T 2zt5_A 542 REGDEQRTFFSFPAVVAPFK 561 (693)
T ss_dssp CSSTTCCEEECCCTTTSSCS
T ss_pred CCCCCCEEEEECCCCCCCCE
T ss_conf 27874013764798758957