HHsearch results for GI: 254780680 and protein with PDBid: 3l4g_A
>3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=97.07 E-value=0.0035 Score=42.81 Aligned_cols=171 Identities=15% Similarity=0.172 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHCCCCEEH-HHHHCCHHHHHHHHHCHHH-----HHHHHHHHHC---------------------------
Q ss_conf 999998622320320212-3562027889865514224-----7677643100---------------------------
Q gi|254780680|r 179 GQFMIDLHTSEHGYTEVS-APLLVRDEAMYGTGQIPKF-----ADDMFCTTDG--------------------------- 225 (430)
Q Consensus 179 i~y~ld~~~~~~Gy~~v~-~P~lv~~~~~~gtG~lp~f-----~~~~y~~~d~--------------------------- 225 (430)
++..-+... .-||+++. .|.++...=-+-+=+.|.+ ..|.|.+++.
T Consensus 231 ~~~ir~if~-~mGF~E~~~~~~Ves~fwNFDaLf~PqdHPaRd~~DTfYl~~~~~~~~~~~d~~~~v~~~h~~g~~~~~g 309 (508)
T 3l4g_A 231 RSQFRQIFL-EMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGYGSQG 309 (508)
T ss_dssp HHHHHHHHH-HTTCEECCCCCSEEEHHHHTGGGTCCSSSTTSSTTTSCBBSTTCBCSCCCHHHHHHHHHHHHTCBTTBCC
T ss_pred HHHHHHHHH-HCCCEEECCCCEEEECCHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 999999998-6898873589815620131353348745898873686885686433446289998877664127766545
Q ss_pred -----------CEECCCCCCHHHHHHHHHCCC-HHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCC
Q ss_conf -----------023134541145445342059-55504208853221078843355434321222210200212127865
Q gi|254780680|r 226 -----------RWLIPTSEVSLTNLYSHEIIE-SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 (430)
Q Consensus 226 -----------l~Li~TaEvpL~~~~~~~~l~-~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe 293 (430)
..+.-|.--++..-+..+... ...-|+|+++..+|||+|.-.+ |+ .++|+-+|-+++...
T Consensus 310 ~~~~~~~~~~~~~vLRtHtt~~~~r~l~~~~~~~~~~p~k~f~i~rvfR~e~~D~---tH----~~~fhQ~eg~v~~~~- 381 (508)
T 3l4g_A 310 YKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDA---TH----LAEFHQIEGVVADHG- 381 (508)
T ss_dssp CCSCCCHHHHTBEEECCCTHHHHHHHHHHHHTSSSCCCEEEEEEEEEECCSCCCS---SS----CSEEEEEEEEEEEES-
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCC---CC----CCCCCCCCCEEECCC-
T ss_conf 4444343332233445788721099999886358989804524555234677867---65----776530311462278-
Q ss_pred CHHHHHHHHHHHHHHHHHHHCC-HHHHCCCCCHHCCCH-HHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCC
Q ss_conf 0145789899999999998410-675303780117844-340241011010048332375310210076453268
Q gi|254780680|r 294 DSFTEHERMLSCAEEILKRLDL-HYRVVSLCTGDLGFS-ACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 (430)
Q Consensus 294 ~S~~~~e~~~~~~~~i~~~L~l-pyRvv~~~sgdlg~~-a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~i 366 (430)
--+..+....++++..++. .+|.. |+- || ..=.+-+++|.|+.+.|.||.-|.-.--=--+.+++
T Consensus 382 ---~~~~~L~~~l~~~~~~lg~~~vR~~--paY---fPfTePS~Ev~v~~~g~~~WlEv~g~G~~rpevL~~~Gi 448 (508)
T 3l4g_A 382 ---LTLGHLMGVLREFFTKLGITQLRFK--PAY---NPYTEPSMEVFSYHQGLKKWVEVGNSGVFRPEMLLPMGL 448 (508)
T ss_dssp ---CCHHHHHHHHHHHHHTTTCCCCEEE--ECC---CTTCSSEEEEEECCSTTSSCEEEEEEECCCHHHHGGGTC
T ss_pred ---CCHHHHHHHHHHHHHHCCCCEEEEC--CCC---CCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHCCC
T ss_conf ---5699999999999997399648706--898---999998089999838999748982572577999986698