HHsearch results for GI: 254780680 and protein with PDBid: 3lc0_A

>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural genomics; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=98.20  E-value=3.4e-06  Score=65.13  Aligned_cols=142  Identities=18%  Similarity=0.224  Sum_probs=101.0

Q ss_pred             CCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHH----HCCEECCCCCCHH
Q ss_conf             675301056488999999999998622320320212356202788986551422476776431----0002313454114
Q gi|254780680|r  161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSL  236 (430)
Q Consensus       161 GsrF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~----d~l~Li~TaEvpL  236 (430)
                      -.||.-+-++++++.+.+.+++.+. ...+||.+|.||.|-+.+++...+. +...++||...    ..++|=|=.=.|+
T Consensus        32 ~~G~~d~lP~~~~~~~~i~~~i~~~-~~~~Gy~eV~TP~le~~dl~~~~~g-~~~~~~my~f~D~~g~~l~LRPD~T~~i  109 (456)
T 3lc0_A           32 VQGCRDFPPEAMRCRRHLFDVFHAT-AKTFGFEEYDAPVLESEELYIRKAG-EEITEQMFNFITKGGHRVALRPEMTPSL  109 (456)
T ss_dssp             STTCCCCCHHHHHHHHHHHHHHHHH-HHHTTCEECCCCSEEEGGGGCCCSC-CHHHHTCEEEECSSSCEEEECSCSHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCEEEECCCCCCHHHHCCCCC-CCCHHHEEEEECCCCCEEEECCCCCHHH
T ss_conf             8998676988999999999999999-9986995988876362877434678-5103310677869998896378684999


Q ss_pred             HHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEE--EEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             54453420595550420885322107884335543432122221020--0212127865014578989999999999841
Q gi|254780680|r  237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK--CELVSITREEDSFTEHERMLSCAEEILKRLD  314 (430)
Q Consensus       237 ~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~K--VE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~  314 (430)
                      +-++...-.+. ..|+|++.++++||.|....|     -+  +||..  +|++....+    ..-.+.+..+.+++..|+
T Consensus       110 aR~~~~~~~~~-~~~~r~~y~g~v~R~~~~~~g-----~~--re~~Q~g~eiig~~~~----~~d~e~i~l~~~~~~~lg  177 (456)
T 3lc0_A          110 ARLLLGKGRSL-LLPAKWYSIPQCWRYEAITRG-----RR--REHYQWNMDIVGVKSV----SAEVELVCAACWAMRSLG  177 (456)
T ss_dssp             HHHHHHSCTTC-CSSEEEEECCEEECCCC----------C--CEEEEEEEEEESCCST----HHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHCC-CCCEEEEEECCEEEECCCCCC-----CC--HHHHHHHHHHCCCCCH----HHHHHHHHHHHHHHHHCC
T ss_conf             99999621205-777368740647850489888-----71--2645545541577516----678888776777775327


Q ss_pred             CH
Q ss_conf             06
Q gi|254780680|r  315 LH  316 (430)
Q Consensus       315 lp  316 (430)
                      ++
T Consensus       178 ~~  179 (456)
T 3lc0_A          178 LS  179 (456)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             75