HHsearch results for GI: 254780680 and protein with PDBid: 3lc0_A
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural genomics; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=98.20 E-value=3.4e-06 Score=65.13 Aligned_cols=142 Identities=18% Similarity=0.224 Sum_probs=101.0
Q ss_pred CCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHH----HCCEECCCCCCHH
Q ss_conf 675301056488999999999998622320320212356202788986551422476776431----0002313454114
Q gi|254780680|r 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSL 236 (430)
Q Consensus 161 GsrF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~----d~l~Li~TaEvpL 236 (430)
-.||.-+-++++++.+.+.+++.+. ...+||.+|.||.|-+.+++...+. +...++||... ..++|=|=.=.|+
T Consensus 32 ~~G~~d~lP~~~~~~~~i~~~i~~~-~~~~Gy~eV~TP~le~~dl~~~~~g-~~~~~~my~f~D~~g~~l~LRPD~T~~i 109 (456)
T 3lc0_A 32 VQGCRDFPPEAMRCRRHLFDVFHAT-AKTFGFEEYDAPVLESEELYIRKAG-EEITEQMFNFITKGGHRVALRPEMTPSL 109 (456)
T ss_dssp STTCCCCCHHHHHHHHHHHHHHHHH-HHHTTCEECCCCSEEEGGGGCCCSC-CHHHHTCEEEECSSSCEEEECSCSHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCEEEECCCCCCHHHHCCCCC-CCCHHHEEEEECCCCCEEEECCCCCHHH
T ss_conf 8998676988999999999999999-9986995988876362877434678-5103310677869998896378684999
Q ss_pred HHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEE--EEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 54453420595550420885322107884335543432122221020--0212127865014578989999999999841
Q gi|254780680|r 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK--CELVSITREEDSFTEHERMLSCAEEILKRLD 314 (430)
Q Consensus 237 ~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~K--VE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~ 314 (430)
+-++...-.+. ..|+|++.++++||.|....| -+ +||.. +|++....+ ..-.+.+..+.+++..|+
T Consensus 110 aR~~~~~~~~~-~~~~r~~y~g~v~R~~~~~~g-----~~--re~~Q~g~eiig~~~~----~~d~e~i~l~~~~~~~lg 177 (456)
T 3lc0_A 110 ARLLLGKGRSL-LLPAKWYSIPQCWRYEAITRG-----RR--REHYQWNMDIVGVKSV----SAEVELVCAACWAMRSLG 177 (456)
T ss_dssp HHHHHHSCTTC-CSSEEEEECCEEECCCC----------C--CEEEEEEEEEESCCST----HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCC-CCCEEEEEECCEEEECCCCCC-----CC--HHHHHHHHHHCCCCCH----HHHHHHHHHHHHHHHHCC
T ss_conf 99999621205-777368740647850489888-----71--2645545541577516----678888776777775327
Q ss_pred CH
Q ss_conf 06
Q gi|254780680|r 315 LH 316 (430)
Q Consensus 315 lp 316 (430)
++
T Consensus 178 ~~ 179 (456)
T 3lc0_A 178 LS 179 (456)
T ss_dssp CC
T ss_pred CC
T ss_conf 75