HHsearch results for GI: 254780680 and protein with PDBid: 3mf2_A

>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A*
Probab=100.00  E-value=0  Score=406.53  Aligned_cols=285  Identities=16%  Similarity=0.173  Sum_probs=245.6

Q ss_pred             CCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHH
Q ss_conf             02258811221135554024200015656656662112202211731000112221675301056488999999999998
Q gi|254780680|r  105 IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID  184 (430)
Q Consensus       105 IPNi~~~~VP~G~de~dNv~i~~~G~~~~f~f~~k~H~elge~l~liDfe~a~kvsGsrF~~Lkg~~A~Le~ALi~y~ld  184 (430)
                      +|+..|..||+.+            ++|.+.+  ..|.++++.++.+|+++|++.+++||+++++.+++||+++..    
T Consensus        15 vprgs~~~~~~~~------------~~p~~a~--~~~~~l~~~~~~~~~~~ga~g~y~~~~~~~~v~~~le~~i~~----   76 (346)
T 3mf2_A           15 VPRGSHMNIAVLP------------NSPDTAP--QIADPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITS----   76 (346)
T ss_dssp             ------------------------------------CCTTGGGHHHHEEEEEETTEEEEEHHHHHHHHHHHHHHHH----
T ss_pred             CCCCCCCCCEECC------------CCCCCCC--CCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH----
T ss_conf             6578866540137------------8986456--640689999852222216755564289999999999999999----


Q ss_pred             HHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHH----------------------------HCCEECCCCCCHH
Q ss_conf             622320320212356202788986551422476776431----------------------------0002313454114
Q gi|254780680|r  185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----------------------------DGRWLIPTSEVSL  236 (430)
Q Consensus       185 ~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~----------------------------d~l~Li~TaEvpL  236 (430)
                       + .++||+++..|.+++.+.+++||++++|.+++|.+.                            .+++|+||+|+++
T Consensus        77 -~-~~~G~~~v~~P~l~~~e~~~~sg~~~~f~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Pt~c~~i  154 (346)
T 3mf2_A           77 -H-REAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLHGTEREINAAVSRFDAGGDWTTSLSPADLVLSPAACYPV  154 (346)
T ss_dssp             -T-CCTTCEEEECCSEEEHHHHHHTTHHHHCGGGCEEEEEECSCHHHHHHHHHHHHTTSCGGGGEEEEEEEECSSSSTTH
T ss_pred             -H-HHCCCEEEECCCEECHHHHHHCCCHHHCHHHEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHH
T ss_conf             -9-97798698688543499997548621043340684136775201222110012344311134776568707871888


Q ss_pred             HHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf             54453420595550420885322107884335543432122221020021212786501457898999999999984106
Q gi|254780680|r  237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH  316 (430)
Q Consensus       237 ~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lp  316 (430)
                      ++++++++. ..+||++|+.+|+|||.|++      +||+|+|||+++|++.||+|+++.++++++++.++++|+.||||
T Consensus       155 ~~~~~~~~~-~~dlP~~~~~~~~~fR~E~~------~Gl~R~reF~~~E~~~f~~~e~~~~~~~~~~~~~~~i~~~LgL~  227 (346)
T 3mf2_A          155 YPIAASRGP-LPKGGLRFDVAADCFRREPS------KHLDRLQSFRMREYVCIGTPDDVSDFRERWMVRAQAIARDLGLT  227 (346)
T ss_dssp             HHHHHTTCS-CCTTCEEEEEEEEEECCCCC------SSTTSCSEEEEEEEEEEESHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHCCCCC-CCCCCEEEEEECCEEECCCC------CCCEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             999725735-51348799997478837899------99932377899999999858999999999999999999987997


Q ss_pred             HHHCCCCC---HHCCCHHHE-------EEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEEECCCCCCCCEEEEECCCH
Q ss_conf             75303780---117844340-------24101101004833237531021007645326847338998410104200432
Q gi|254780680|r  317 YRVVSLCT---GDLGFSACK-------TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSG  386 (430)
Q Consensus       317 yRvv~~~s---gdlg~~a~~-------~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~iry~~~~~~~~~~~htlNgt~  386 (430)
                      ||++..|+   ||+|..+.+       +||+|+|+|++++|.||+|++||+||||+|++|+|.+.     +++|| +..|
T Consensus       228 ~~~~~a~d~~~gd~g~~~~~~~~~~~~k~d~e~~~p~~~~~~evgsi~~~gd~~~~r~~i~~~d~-----~~~h~-~~~G  301 (346)
T 3mf2_A          228 FRVDYASDPFFGRVGQMKAVSQKQQQLKFELLIPLRSEEQPTACMSFNYHREHFGTTWGIQDANG-----EPAHT-GCVA  301 (346)
T ss_dssp             CEEEECCCCCCHHHHHHHHHHHHHTTCEEEEEECSSCSSSCEEEEEEEECTTHHHHHHTCBCTTS-----SBCEE-EEEE
T ss_pred             EEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEECC-----CEEEE-CCCC
T ss_conf             69998258888744148776332203247999980899977888316414775673359888189-----97887-6774


Q ss_pred             HHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEEC
Q ss_conf             28999999998834689983865822231018801307
Q gi|254780680|r  387 VAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK  424 (430)
Q Consensus       387 ~A~~R~l~ailEn~q~~dg~i~iP~~L~pym~g~~~i~  424 (430)
                      +++.|+++||||+|+.+.+  .-|+..|.+++-...+.
T Consensus       302 ~g~eR~v~aliE~h~~~~~--~Wp~~vr~~l~l~P~~a  337 (346)
T 3mf2_A          302 FGMDRLAVAMFHTHGTDLS--AWPAKVRDILGLQPHVA  337 (346)
T ss_dssp             EEHHHHHHHHHHHHCSCGG--GSCHHHHHHTTSCCC--
T ss_pred             CHHHHHHHHHHHHCCCCCC--CCCHHHHHHHCCCCCCC
T ss_conf             6599999999996799989--88588887742785333