PSIBLAST alignment of GI: 254780680 and protein with PDB id: 3lsq
>gi|290560564|pdb|3LSQ|A Chain A, Trypanosoma Brucei Seryl-Trna Synthetase Length = 484
>gi|290560565|pdb|3LSQ|B Chain B, Trypanosoma Brucei Seryl-Trna Synthetase Length = 484
>gi|290560566|pdb|3LSS|A Chain A, Trypanosoma Brucei Seryl-Trna Synthetase In Complex With Atp Length = 484
Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats.
Identities = 137/470 (29%), Positives = 213/470 (45%), Gaps = 44/470 (9%)
Query: 2 LDIQWIRQNP--EHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA-- 56
LDIQ R + + ++R +P + I+ D+K R E + N S
Sbjct: 8 LDIQLFRDETGANIIRESQRRRFADPDIVDAIIEADKKWRRTQFLTEASKKLINICSKAV 67
Query: 57 ------------------QIGQAIAEG--NLSLVDAL-----KNETSTLKEQLPILEKEE 91
Q+ +A G V+ L K + L +Q+ L KE
Sbjct: 68 GAKKKAKEADGDTSEIPPQVKEAYENGTLKGEQVEQLCVLQLKQLSKDLSDQVAGLAKEA 127
Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151
++ KL+ + N+ E VPI + + H I E LG+M
Sbjct: 128 QQLEEERDKLMLNVGNILHESVPIAQDEETGNTVVRTFGNTTKRAK-LNHVSIMERLGMM 186
Query: 152 DF-DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210
D T ++G R VL G L L+ AL + +D + GYT P + + M
Sbjct: 187 DTSKAVTSMAGGRSYVLKGGLVQLQVALVSYSLDF-LVKRGYTPFYPPFFLNRDVMGEVA 245
Query: 211 QIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267
Q+ +F ++++ + D ++LI TSE+ + + PL++ ++ FR EAG+
Sbjct: 246 QLSQFDEELYQVSGDGDKKYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGA 305
Query: 268 AGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325
GRDT G+ R HQF K E + E+S+ E M++ +EE K L L YRVV++C+G
Sbjct: 306 HGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSG 365
Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD-----PNSKSLKFTH 380
L +A K YDLE W +RE+ SCS C ++QS+ +N RY ++ H
Sbjct: 366 ALNNAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLRGTAAQNVKEYCH 425
Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHILE 430
LNG+ A+ R + I ENY +G V IP VLRPYM + +I+ E+ +
Sbjct: 426 MLNGTLCAITRTMCCICENYQTEEG-VVIPDVLRPYMMGIEMIRFENNAQ 474