BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780680|ref|YP_003065093.1| seryl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] (430 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|46578654|ref|YP_009462.1| seryl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|67461806|sp|Q72FH6|SYS_DESVH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|46448065|gb|AAS94721.1| seryl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|311232527|gb|ADP85381.1| seryl-tRNA synthetase [Desulfovibrio vulgaris RCH1] Length = 424 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 203/425 (47%), Positives = 272/425 (64%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ +++NPE + AL RH + +LD + R L+ ++E +++ RN SA++ + Sbjct: 1 MLDLKLLQKNPEVVAKALAMRHSDIDIATFTTLDTRRRALLTEVESLKSERNKASAEVAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G AL + E++ L+ E V S + IPN+P E VP G N Sbjct: 61 AKRAG--EDASALIERLGGVSERIKALDLEAEAVKSEQNDWMLTIPNIPHESVPEGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G + REH++IG ALG +DF+RA KL+G+RF+V A LERAL Sbjct: 119 DNVEVLRWGTPRAFSFTPREHWDIGVALGGLDFERAGKLAGSRFTVYWKWAARLERALAN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 + +D H S +GYTEV P +V + M GTGQ+PKF +D+F + +LIPT+EV LTNL Sbjct: 179 YFLDTHISANGYTEVLPPFMVNRKTMTGTGQLPKFEEDLFRLESWDYFLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI+E LPL +T P FRSEAGS G+DTRG++RQHQF K E+V E SF E Sbjct: 239 HADEILEEGDLPLGYTAQTPCFRSEAGSYGKDTRGLIRQHQFTKVEMVRFAHPERSFDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ERM AE +L+ L L YRV++LC+GD+GFSA KTYDLEVWL GQ+ YREISSCS CG+F Sbjct: 299 ERMRGHAEALLQNLGLPYRVITLCSGDMGFSATKTYDLEVWLPGQDKYREISSCSNCGDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSG+AVGR L+A+LENY DGSV +P VLRPYM Sbjct: 359 QARRANIRFRPAGGGKPEFVHTLNGSGLAVGRTLVAVLENYQQEDGSVIVPEVLRPYMGG 418 Query: 420 LAVIK 424 L I Sbjct: 419 LERIT 423 >gi|120603778|ref|YP_968178.1| seryl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|166221435|sp|A1VH35|SYS_DESVV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|120564007|gb|ABM29751.1| seryl-tRNA synthetase [Desulfovibrio vulgaris DP4] Length = 424 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 203/425 (47%), Positives = 272/425 (64%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ +++NPE + AL RH + +LD + R L+ ++E +++ RN SA++ + Sbjct: 1 MLDLKLLQKNPEVVAKALAMRHSDIDIATFTTLDTRRRALLTEVESLKSERNKASAEVAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G AL + E++ L+ E V S + IPN+P E VP G N Sbjct: 61 AKRAG--EDASALIERLGGVSERIKALDLEAEAVKSEQNDWMLTIPNIPHESVPEGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G + REH++IG ALG +DF+RA KL+G+RF+V A LERAL Sbjct: 119 DNVEVLRWGTPRAFSFTPREHWDIGVALGGLDFERAGKLAGSRFTVYWKWAARLERALAN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 + +D H S +GYTEV P +V + M GTGQ+PKF +D+F + +LIPT+EV LTNL Sbjct: 179 YFLDTHISANGYTEVLPPFMVNRKTMTGTGQLPKFEEDLFRLESWDYFLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI+E LPL +T P FRSEAGS G+DTRG++RQHQF K E+V E SF E Sbjct: 239 HADEILEEGDLPLGYTAQTPCFRSEAGSYGKDTRGLIRQHQFTKVEMVRFAHPERSFEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ERM AE +L+ L L YRV++LC+GD+GFSA KTYDLEVWL GQ+ YREISSCS CG+F Sbjct: 299 ERMRGHAEALLQNLGLPYRVITLCSGDMGFSATKTYDLEVWLPGQDKYREISSCSNCGDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSG+AVGR L+A+LENY DGSV +P VLRPYM Sbjct: 359 QARRANIRFRPAGGGKPEFVHTLNGSGLAVGRTLVAVLENYQQEDGSVIVPEVLRPYMGG 418 Query: 420 LAVIK 424 L I Sbjct: 419 LERIT 423 >gi|306843782|ref|ZP_07476380.1| seryl-tRNA synthetase [Brucella sp. BO1] gi|306275860|gb|EFM57576.1| seryl-tRNA synthetase [Brucella sp. BO1] Length = 469 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 258/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 43 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 102 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LKE L E++E + L +S IPN+PL++VP+G + Sbjct: 103 AMAAKDMDTAEKLKAEVGELKEFLAHAEEDERRLSKELNDALSTIPNIPLDDVPLGKDES 162 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 163 DNVELRRIGNPRNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 222 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 223 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 282 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VS+T E S EHE Sbjct: 283 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSVTDAESSVAEHE 342 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 343 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 402 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 403 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 462 Query: 421 AVIKK 425 I+K Sbjct: 463 TRIEK 467 >gi|306840377|ref|ZP_07473144.1| seryl-tRNA synthetase [Brucella sp. BO2] gi|306289662|gb|EFM60862.1| seryl-tRNA synthetase [Brucella sp. BO2] Length = 469 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 258/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 43 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 102 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LKE L E++E + L +S IPN+PL++VP+G + Sbjct: 103 AMAAKDMDTAEKLKAEVGELKEFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 162 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 163 DNVELRRIGNPRNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 222 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 223 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 282 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VS+T E S EHE Sbjct: 283 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSVTDAESSVAEHE 342 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 343 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 402 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 403 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 462 Query: 421 AVIKK 425 I+K Sbjct: 463 TRIEK 467 >gi|148559314|ref|YP_001258859.1| seryl-tRNA synthetase [Brucella ovis ATCC 25840] gi|148370571|gb|ABQ60550.1| seryl-tRNA synthetase [Brucella ovis ATCC 25840] Length = 469 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 258/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 43 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 102 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 103 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERCLSKELSDALSTIPNIPLDDVPLGKDES 162 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 163 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 222 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 223 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 282 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VSIT E S EHE Sbjct: 283 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHE 342 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 343 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 402 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 403 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 462 Query: 421 AVIKK 425 I+K Sbjct: 463 TRIEK 467 >gi|258405089|ref|YP_003197831.1| seryl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] gi|257797316|gb|ACV68253.1| seryl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] Length = 426 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 283/428 (66%), Gaps = 3/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R++PE + AL+KR+++ + ++D K R ++++ED+++RRN S QIGQ Sbjct: 1 MLDLKFVRKSPETVKDALRKRNMDLDLDAFQAIDAKRREYLQEVEDLKSRRNEVSKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + L E++ L+ E + ++ + +PN+P VP G Sbjct: 61 RKKNG--EDAEDLIQAMGEAAERIKELDALAKEAEAEVQDWMLSLPNIPDTSVPDGEDDA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R+ G P+ L +EH+E+G L +DF+RA KL+G+RF+V G A LERAL Q Sbjct: 119 DNEELRTWGALPTFSFLPKEHWELGVQLSGLDFERAAKLTGSRFAVYWGWAAKLERALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+D+ T+EH YTEV P++V + M GTGQ+PKF +D+F +LIPT+EV LTNL Sbjct: 179 FMLDIQTTEHDYTEVMPPVIVNSQTMRGTGQLPKFEEDLFKLEGWEYYLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ E+++ + LP + P FRSEAGS G+DT+G++RQHQF K ELV + SF E Sbjct: 239 HAGEVLDEQDLPRGYAAFTPCFRSEAGSYGKDTKGLIRQHQFNKVELVRFAHPDHSFEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E +L AE +LKRL+L YRVV+LC GD+GFSA KTYDLEVWL GQ+ YREISSCS CG+F Sbjct: 299 ENLLGHAETVLKRLELPYRVVTLCGGDIGFSAVKTYDLEVWLPGQDTYREISSCSNCGDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R++ +K +F HTLNGSG+AVGR L+A+LENY DGSV IP L+PYM Sbjct: 359 QARRAGIRFKRAGAKKAEFLHTLNGSGLAVGRTLVAVLENYQQEDGSVAIPEALKPYMGG 418 Query: 420 LAVIKKEH 427 L I ++ Sbjct: 419 LERITPKN 426 >gi|237815315|ref|ZP_04594313.1| seryl-tRNA synthetase [Brucella abortus str. 2308 A] gi|237790152|gb|EEP64362.1| seryl-tRNA synthetase [Brucella abortus str. 2308 A] Length = 469 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 258/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 43 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 102 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 103 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 162 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 163 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 222 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 223 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 282 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VSIT E S EHE Sbjct: 283 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHE 342 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 343 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 402 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 403 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 462 Query: 421 AVIKK 425 I+K Sbjct: 463 TRIEK 467 >gi|225627373|ref|ZP_03785410.1| seryl-tRNA synthetase [Brucella ceti str. Cudo] gi|225617378|gb|EEH14423.1| seryl-tRNA synthetase [Brucella ceti str. Cudo] Length = 469 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 258/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 43 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 102 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 103 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 162 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 163 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 222 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 223 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 282 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VSIT E S EHE Sbjct: 283 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHE 342 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 343 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 402 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 403 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 462 Query: 421 AVIKK 425 I+K Sbjct: 463 TRIEK 467 >gi|288574952|ref|ZP_06393309.1| seryl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570693|gb|EFC92250.1| seryl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 425 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 278/425 (65%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R + + + LK R+ + + IL LD K R LI ++E+++A RN+ S ++G Sbjct: 1 MLDIKYVRDHMDEVRDFLKARNHDFNLDSILELDAKRRELISEVEELKAERNAGSKKVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G A+ + E++ L+++ EV + L L+ +PN P + VP+G + Sbjct: 61 AKAKG--EDPTAIMERMKAIGEEIKALDQKVAEVDAGLDDLMLQVPNRPHDSVPVGVDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G H+++GE LG++DF R KL+ +RF+V+ G A LERAL Sbjct: 119 DNVEVRKWGDPREFDFEPLPHWDLGENLGILDFKRGVKLAQSRFTVMAGPGARLERALLN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 FM+DLH HGY E++ P +V M GTGQ+PKFADD++ D WLIPT+EV LTNL Sbjct: 179 FMLDLHVDRHGYKEINPPFMVNSATMTGTGQLPKFADDLYRIADDDLWLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+E LPL +T P FR EAGS GRD RG++RQHQF K E+V ++ E+S+ E Sbjct: 239 HGGEIMEESDLPLYYTAYTPCFRKEAGSHGRDVRGIMRQHQFEKVEMVKLSTPENSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ S AEE+L+ L L YRV++LCTGD+GF A KTYD+EVWL Q YREISSCS C +F Sbjct: 299 EKLTSNAEEVLQLLKLPYRVITLCTGDMGFGASKTYDIEVWLPSQGRYREISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RRMN+RYR +F HTLNGSG+A+GR LIA++ENY DGS+ IP VL PYM Sbjct: 359 QARRMNTRYRPSQGGKPRFVHTLNGSGIAIGRALIAVMENYQRTDGSIEIPEVLVPYMGG 418 Query: 420 LAVIK 424 L I Sbjct: 419 LKEIT 423 >gi|297248235|ref|ZP_06931953.1| seryl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] gi|297175404|gb|EFH34751.1| seryl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] Length = 469 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 257/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 43 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 102 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 103 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 162 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 163 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 222 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 223 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 282 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAG+AGRDTRGMLRQHQF K E+VSIT E S EHE Sbjct: 283 AEEIVDMKGLPLRFTALTPCFRSEAGAAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHE 342 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 343 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 402 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 403 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 462 Query: 421 AVIKK 425 I+K Sbjct: 463 TRIEK 467 >gi|17983051|gb|AAL52263.1| seryl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] Length = 469 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 257/425 (60%), Positives = 320/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 43 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 102 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 103 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 162 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 163 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 222 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 223 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 282 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VSIT E S EHE Sbjct: 283 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHE 342 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 343 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 402 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSG AVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 403 GRRMNARYRPEGEKSTRFVHTLNGSGAAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 462 Query: 421 AVIKK 425 I+K Sbjct: 463 TRIEK 467 >gi|306837337|ref|ZP_07470218.1| seryl-tRNA synthetase [Brucella sp. NF 2653] gi|306407589|gb|EFM63787.1| seryl-tRNA synthetase [Brucella sp. NF 2653] Length = 469 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 257/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 43 MLDIKWIRENPETLDKALAKRGAAPLSFELIALDEKRREHVGKVQAAQERRNAASKEIGK 102 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 103 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 162 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 163 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 222 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 223 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 282 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VS+T E S EHE Sbjct: 283 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSVTDAESSVAEHE 342 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 343 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 402 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 403 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 462 Query: 421 AVIKK 425 I+K Sbjct: 463 TRIEK 467 >gi|62289830|ref|YP_221623.1| seryl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699755|ref|YP_414329.1| seryl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189024071|ref|YP_001934839.1| seryl-tRNA synthetase [Brucella abortus S19] gi|254689135|ref|ZP_05152389.1| seryl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|254697268|ref|ZP_05159096.1| seryl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|254701649|ref|ZP_05163477.1| seryl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|254706906|ref|ZP_05168734.1| seryl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|254709987|ref|ZP_05171798.1| seryl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|254713987|ref|ZP_05175798.1| seryl-tRNA synthetase [Brucella ceti M644/93/1] gi|254716954|ref|ZP_05178765.1| seryl-tRNA synthetase [Brucella ceti M13/05/1] gi|254730167|ref|ZP_05188745.1| seryl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|256031480|ref|ZP_05445094.1| seryl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|256060990|ref|ZP_05451148.1| seryl-tRNA synthetase [Brucella neotomae 5K33] gi|256159606|ref|ZP_05457368.1| seryl-tRNA synthetase [Brucella ceti M490/95/1] gi|256254886|ref|ZP_05460422.1| seryl-tRNA synthetase [Brucella ceti B1/94] gi|256369312|ref|YP_003106820.1| seryl-tRNA synthetase [Brucella microti CCM 4915] gi|260168614|ref|ZP_05755425.1| seryl-tRNA synthetase [Brucella sp. F5/99] gi|260545423|ref|ZP_05821164.1| seryl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260754634|ref|ZP_05866982.1| seryl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260757857|ref|ZP_05870205.1| seryl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260761680|ref|ZP_05874023.1| seryl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|261218759|ref|ZP_05933040.1| seryl-tRNA synthetase [Brucella ceti M13/05/1] gi|261222070|ref|ZP_05936351.1| seryl-tRNA synthetase [Brucella ceti B1/94] gi|261314369|ref|ZP_05953566.1| seryl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261317535|ref|ZP_05956732.1| seryl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261321742|ref|ZP_05960939.1| seryl-tRNA synthetase [Brucella ceti M644/93/1] gi|261324992|ref|ZP_05964189.1| seryl-tRNA synthetase [Brucella neotomae 5K33] gi|261752202|ref|ZP_05995911.1| seryl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261758088|ref|ZP_06001797.1| seryl-tRNA synthetase [Brucella sp. F5/99] gi|265988570|ref|ZP_06101127.1| seryl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|265998035|ref|ZP_06110592.1| seryl-tRNA synthetase [Brucella ceti M490/95/1] gi|81309426|sp|Q57DM2|SYS_BRUAB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123546686|sp|Q2YNM6|SYS_BRUA2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238689362|sp|B2S5B8|SYS_BRUA1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|62195962|gb|AAX74262.1| SerS, seryl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82615856|emb|CAJ10860.1| tRNA synthetases, class-II (G, H, P and S):Seryl-tRNA synthetase, class IIa:Aminoacyl-transfer RNA synthetase, class II [Brucella melitensis biovar Abortus 2308] gi|189019643|gb|ACD72365.1| seryl-tRNA synthetase [Brucella abortus S19] gi|255999472|gb|ACU47871.1| seryl-tRNA synthetase [Brucella microti CCM 4915] gi|260096830|gb|EEW80705.1| seryl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260668175|gb|EEX55115.1| seryl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260672112|gb|EEX58933.1| seryl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260674742|gb|EEX61563.1| seryl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260920654|gb|EEX87307.1| seryl-tRNA synthetase [Brucella ceti B1/94] gi|260923848|gb|EEX90416.1| seryl-tRNA synthetase [Brucella ceti M13/05/1] gi|261294432|gb|EEX97928.1| seryl-tRNA synthetase [Brucella ceti M644/93/1] gi|261296758|gb|EEY00255.1| seryl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261300972|gb|EEY04469.1| seryl-tRNA synthetase [Brucella neotomae 5K33] gi|261303395|gb|EEY06892.1| seryl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261738072|gb|EEY26068.1| seryl-tRNA synthetase [Brucella sp. F5/99] gi|261741955|gb|EEY29881.1| seryl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|262552503|gb|EEZ08493.1| seryl-tRNA synthetase [Brucella ceti M490/95/1] gi|264660767|gb|EEZ31028.1| seryl-tRNA synthetase [Brucella pinnipedialis M292/94/1] Length = 427 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 258/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 1 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 61 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 121 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 181 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VSIT E S EHE Sbjct: 241 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 301 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 361 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 420 Query: 421 AVIKK 425 I+K Sbjct: 421 TRIEK 425 >gi|254693618|ref|ZP_05155446.1| seryl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|261213884|ref|ZP_05928165.1| seryl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|260915491|gb|EEX82352.1| seryl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] Length = 427 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 258/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 1 MLDIKWIRENPETLDKALAKRGAAPLSSELITLDEKRREHVGKVQAAQERRNAASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 61 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 121 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 181 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VSIT E S EHE Sbjct: 241 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 301 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 361 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 420 Query: 421 AVIKK 425 I+K Sbjct: 421 TRIEK 425 >gi|256257384|ref|ZP_05462920.1| seryl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260883661|ref|ZP_05895275.1| seryl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260873189|gb|EEX80258.1| seryl-tRNA synthetase [Brucella abortus bv. 9 str. C68] Length = 427 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 257/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 1 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 61 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 121 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 181 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAG+AGRDTRGMLRQHQF K E+VSIT E S EHE Sbjct: 241 AEEIVDMKGLPLRFTALTPCFRSEAGAAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 301 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 361 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 420 Query: 421 AVIKK 425 I+K Sbjct: 421 TRIEK 425 >gi|161511138|ref|NP_539999.2| seryl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|225852397|ref|YP_002732630.1| seryl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|256044558|ref|ZP_05447462.1| seryl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|256113431|ref|ZP_05454272.1| seryl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|256264105|ref|ZP_05466637.1| seryl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|260563911|ref|ZP_05834397.1| seryl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265990984|ref|ZP_06103541.1| seryl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265994821|ref|ZP_06107378.1| seryl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|30173191|sp|Q8YGS6|SYS_BRUME RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783011|sp|C0RIL8|SYS_BRUMB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|225640762|gb|ACO00676.1| seryl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|260153927|gb|EEW89019.1| seryl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|262765934|gb|EEZ11723.1| seryl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|263001768|gb|EEZ14343.1| seryl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263094323|gb|EEZ18168.1| seryl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|326408903|gb|ADZ65968.1| seryl-tRNA synthetase [Brucella melitensis M28] gi|326538622|gb|ADZ86837.1| seryl-tRNA synthetase [Brucella melitensis M5-90] Length = 427 Score = 458 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 257/425 (60%), Positives = 320/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 1 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 61 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 121 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 181 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VSIT E S EHE Sbjct: 241 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 301 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSG AVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 361 GRRMNARYRPEGEKSTRFVHTLNGSGAAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 420 Query: 421 AVIKK 425 I+K Sbjct: 421 TRIEK 425 >gi|254718989|ref|ZP_05180800.1| seryl-tRNA synthetase [Brucella sp. 83/13] gi|265983979|ref|ZP_06096714.1| seryl-tRNA synthetase [Brucella sp. 83/13] gi|264662571|gb|EEZ32832.1| seryl-tRNA synthetase [Brucella sp. 83/13] Length = 427 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 257/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 1 MLDIKWIRENPETLDKALAKRGAAPLSFELIALDEKRREHVGKVQAAQERRNAASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 61 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 121 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 181 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VS+T E S EHE Sbjct: 241 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSVTDAESSVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 301 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 361 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYMGGL 420 Query: 421 AVIKK 425 I+K Sbjct: 421 TRIEK 425 >gi|23501771|ref|NP_697898.1| seryl-tRNA synthetase [Brucella suis 1330] gi|161618845|ref|YP_001592732.1| seryl-tRNA synthetase [Brucella canis ATCC 23365] gi|163843156|ref|YP_001627560.1| seryl-tRNA synthetase [Brucella suis ATCC 23445] gi|254704192|ref|ZP_05166020.1| seryl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|260566558|ref|ZP_05837028.1| seryl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261754861|ref|ZP_05998570.1| seryl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|30173166|sp|Q8G139|SYS_BRUSU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083559|sp|A9MAQ8|SYS_BRUC2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083560|sp|B0CLL0|SYS_BRUSI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|23347700|gb|AAN29813.1| seryl-tRNA synthetase [Brucella suis 1330] gi|161335656|gb|ABX61961.1| seryl-tRNA synthetase [Brucella canis ATCC 23365] gi|163673879|gb|ABY37990.1| seryl-tRNA synthetase [Brucella suis ATCC 23445] gi|260156076|gb|EEW91156.1| seryl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261744614|gb|EEY32540.1| seryl-tRNA synthetase [Brucella suis bv. 3 str. 686] Length = 427 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 257/425 (60%), Positives = 321/425 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 1 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 61 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 121 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 181 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VSIT E S EHE Sbjct: 241 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISSCSTCG+FQ Sbjct: 301 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PY+ L Sbjct: 361 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQQEDGSIHIPEALQPYIGGL 420 Query: 421 AVIKK 425 I+K Sbjct: 421 TRIEK 425 >gi|78355243|ref|YP_386692.1| seryl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123768909|sp|Q316Z9|SYS_DESDG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|78217648|gb|ABB36997.1| seryl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 427 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 203/428 (47%), Positives = 284/428 (66%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ ++ NPE + AL KR+ +LD++ R L+ ++E +++ RN S + + Sbjct: 1 MLDLKLLQNNPEVVAEALAKRNSGIDITLFTALDQRRRELLLEVEALKSERNKASGDVAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G DAL + L +++ L+ E V + + + + +PN+P E VP G N Sbjct: 61 MKRAG--ENADALIEKLGALSDRIKTLDAETETVKAEVHQWLISLPNIPHESVPAGADEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + + G+KPS +EH+EIG ALG +DF+R ++L+G+RF+VL A LERAL Sbjct: 119 DNVFLHAWGEKPSFDFTPKEHWEIGPALG-LDFERGSRLTGSRFTVLWHWAAKLERALTA 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNL 239 F +D+HT EHGY EV P +V + M GTGQ+PKF +D+F D +LIPT+EV LTNL Sbjct: 178 FFLDVHTREHGYMEVYPPAMVNAQTMTGTGQLPKFEEDLFKLRDSEYYLIPTAEVPLTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S E++ + LP+ +T FRSEAGS G+DT+G +RQHQF K E+V E SF E Sbjct: 238 HSGEVVPEEKLPIAYTAQTQCFRSEAGSYGKDTKGFIRQHQFTKVEMVRFAHPEKSFEEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ S AE +L++L LHYRVV+LC+GD+GFSA KTYDLEVWL GQ+ YREISSCS C +F Sbjct: 298 EKLRSHAEVLLQKLGLHYRVVTLCSGDMGFSAAKTYDLEVWLPGQDKYREISSCSNCTDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R R ++K F HTLNGSG+AVGR L+AILENY ADGSV +P VLRPYM Sbjct: 358 QARRANIRTRLADAKKPVFLHTLNGSGLAVGRTLVAILENYQQADGSVVVPEVLRPYMGG 417 Query: 420 LAVIKKEH 427 +A++ + Sbjct: 418 VALLTPDG 425 >gi|227821937|ref|YP_002825907.1| seryl-tRNA synthetase [Sinorhizobium fredii NGR234] gi|254783042|sp|C3MBU2|SYS_RHISN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|227340936|gb|ACP25154.1| seryl-tRNA synthetase [Sinorhizobium fredii NGR234] Length = 427 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 262/425 (61%), Positives = 328/425 (77%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+N LD AL KR EP S +++LDE+ R +++ ++++++RRN+ S +IG Sbjct: 1 MLDIKWIRENAGVLDNALAKRGAEPLSASLIALDERRRTVLQSLQEMQSRRNAASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ N L + LK E + LK+ LP E+E + + L ++S IPNVPLE+VP+G + Sbjct: 61 AMAQKNSELAEKLKAEVAELKDALPAAEEESRRMEAELTDILSRIPNVPLEDVPVGPDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++ R VG KP+ H EHFEIGE LG MDF+ A +++G+RF++L G LA LERALGQ Sbjct: 121 GNVVKRLVGSKPTWNHKPLEHFEIGEGLGFMDFEGAARIAGSRFTILKGQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGY EV PLLVRD+AMYGTGQ+PKFA+D+F TTDGRWLIPT+EV LTN+ Sbjct: 181 FMLDLHTQEHGYIEVQPPLLVRDDAMYGTGQLPKFAEDLFRTTDGRWLIPTAEVPLTNMV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +I+E + LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K ELVS+T E S EHE Sbjct: 241 REQILEGEKLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFNKVELVSLTDAETSVDEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LHYRV++LCTGD+GF A KTYDLEVWL GQ+ YREISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHYRVMTLCTGDMGFGARKTYDLEVWLPGQDAYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR K KF HTLNGSGVAVGR LIA++ENYLN DGSV++P VL PYM L Sbjct: 361 ARRMNARYRSKEEKGTKFVHTLNGSGVAVGRALIAVIENYLNEDGSVSVPEVLVPYMGGL 420 Query: 421 AVIKK 425 ++K Sbjct: 421 RRVEK 425 >gi|15965285|ref|NP_385638.1| seryl-tRNA synthetase [Sinorhizobium meliloti 1021] gi|307307875|ref|ZP_07587600.1| seryl-tRNA synthetase [Sinorhizobium meliloti BL225C] gi|307317049|ref|ZP_07596490.1| seryl-tRNA synthetase [Sinorhizobium meliloti AK83] gi|30173198|sp|Q92Q22|SYS_RHIME RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|15074465|emb|CAC46111.1| Probable seryl-tRNA synthetase (serine--tRNA ligase) [Sinorhizobium meliloti 1021] gi|306897137|gb|EFN27882.1| seryl-tRNA synthetase [Sinorhizobium meliloti AK83] gi|306901491|gb|EFN32094.1| seryl-tRNA synthetase [Sinorhizobium meliloti BL225C] Length = 427 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 264/425 (62%), Positives = 326/425 (76%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+N + LD AL KR EP S +++LDE+ R +++ ++D+++RRN+ S +IG Sbjct: 1 MLDIKWIRENADALDEALAKRGAEPLSASLIALDERRRAVLQSLQDMQSRRNAASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ N L D LK E + LK LP E+E + + L +S IPN PL +VP+G + Sbjct: 61 AMAQKNSELADRLKAEVADLKNALPAAEEESRRIEAELSDALSRIPNTPLADVPVGADES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++ R VG KP H EHFEIGEALGLMDF+ A +++G+RF++L G LA LERALGQ Sbjct: 121 ANVVTRVVGAKPGWNHKPLEHFEIGEALGLMDFEGAARIAGSRFTILKGQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGY EV PLLVRD+AMYGTGQ+PKF+DD+F TTDGRWLIPT+EV LTN+ Sbjct: 181 FMLDLHTGEHGYIEVQPPLLVRDDAMYGTGQLPKFSDDLFRTTDGRWLIPTAEVPLTNMV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +I++ + LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K ELVSIT E S EHE Sbjct: 241 REQILDGEKLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFNKVELVSITDAESSIDEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LHYRV++LCTGD+GF A KTYDLEVWL GQ+ YREISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHYRVMTLCTGDMGFGARKTYDLEVWLPGQDAYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR K KF HTLNGSGVA+GR LIA++ENYLN DGS+T+P VL PYM L Sbjct: 361 ARRMNARYRGKEEKGTKFVHTLNGSGVALGRALIAVIENYLNDDGSITVPDVLVPYMGGL 420 Query: 421 AVIKK 425 I+K Sbjct: 421 RRIEK 425 >gi|90419386|ref|ZP_01227296.1| seryl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90336323|gb|EAS50064.1| seryl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 427 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 239/426 (56%), Positives = 316/426 (74%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR NP+ LD AL +R P +E +L LDE+ R + +++ ++ RRN S IG+ Sbjct: 1 MLDIKWIRDNPDKLDAALARRGAAPLAEQLLKLDEERRAHLTRLQTLQGRRNEASKAIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ + + L E +KE + E+ E + SL+ ++ IPN+PL++VP G Sbjct: 61 AKGTGDEAGAEELIREIGEIKEAIQDGEETERRIDKSLEDALARIPNIPLDDVPEGADET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ P+ +EH+E+GE LGLMDF++A K+SG+RF++L G LA +ERALGQ Sbjct: 121 DNVEIRRHGEAPNFGFAPKEHYELGEGLGLMDFEQAAKISGSRFTILKGQLARMERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGY E +APLLVRDEA++GTGQ+PKF++D+F T++GRWLIPT+EV LTN+ Sbjct: 181 FMLDLHTGEHGYQETAAPLLVRDEALFGTGQLPKFSEDLFHTSEGRWLIPTAEVPLTNMV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +++ + LPLRFT L P FRSEAGSAGRDTRGMLRQHQF+K ELVS+T E S EHE Sbjct: 241 REQMLGAGDLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFYKVELVSVTDEGSSIAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM + AEE+LKRL L YRVV+LC GD+GF A KTYD+EVWL GQ+ +REISSCS CG+FQ Sbjct: 301 RMTAAAEEVLKRLGLSYRVVTLCAGDMGFGARKTYDIEVWLPGQDAFREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RYR K+ ++ HTLNGSGVAVGR LIA++ENY N DGS+T+P LRPYM L Sbjct: 361 ARRMGTRYRVEGEKAARYVHTLNGSGVAVGRALIAVMENYQNEDGSITVPEALRPYMGGL 420 Query: 421 AVIKKE 426 I++ Sbjct: 421 ERIERT 426 >gi|87198872|ref|YP_496129.1| seryl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444] gi|123736268|sp|Q2GA28|SYS_NOVAD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|87134553|gb|ABD25295.1| seryl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444] Length = 426 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 230/427 (53%), Positives = 296/427 (69%), Gaps = 1/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+N E D AL +R + P ++ ILSLD + R + ++++++ARRN S IG Sbjct: 1 MHDIRLIRENAEAFDAALARRGVGPVAQSILSLDSRRREIATRMQEVQARRNEASKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ +G+ +ALK E + LK +LP LE+EE ++ + ++ PN P +VP G Sbjct: 61 AMGKGDKDTAEALKAEVAALKVELPALEEEERQLTAQQNAALAAYPNTPAADVPEGADEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G +EH ++G ALG +DF+ +SGARF+ L G +A L RAL Q Sbjct: 121 DNVEVSRWGTPRDFAFAPKEHADLGPALG-LDFETGALISGARFTFLKGQMARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D T E+GY E PLLV+DEA++GTGQ+PKFA+D+F TTDGRWLIPT+EVSLTN Sbjct: 180 FMLDRQTGENGYMECIPPLLVKDEAVFGTGQLPKFAEDLFRTTDGRWLIPTAEVSLTNAV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +I+ LPLR T L P FRSEAG+AGRDTRG +RQHQF K ELVSITR EDS +EHE Sbjct: 240 QGQILGEAQLPLRMTALTPCFRSEAGAAGRDTRGFIRQHQFEKVELVSITRPEDSESEHE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE IL+ L L YR V LCTGD+GF+A KTYDLEVWL GQ YREISSCS CG+FQ Sbjct: 300 RMTQCAEGILQALGLPYRKVLLCTGDMGFTARKTYDLEVWLPGQGAYREISSCSNCGDFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR +K +F HTLNGSG+AVGR L+A+LENY DGSV +P VL PYM L Sbjct: 360 ARRMNARYRPEGAKGTEFVHTLNGSGLAVGRTLVAVLENYQQEDGSVAVPEVLLPYMGGL 419 Query: 421 AVIKKEH 427 A + + Sbjct: 420 ARLTPQG 426 >gi|317154684|ref|YP_004122732.1| seryl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316944935|gb|ADU63986.1| seryl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 425 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 288/427 (67%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ +++ P+ + +LKKR + + L+LDE+ + LI + E ++A RN+ +I + Sbjct: 1 MLDLKLMQKTPDLVRESLKKRGSKIDVQEFLTLDERRKSLIAEGETLKAERNAAGPEIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G AL + + E++ L+ E EV ++ + + +PN+P E VP+G S Sbjct: 61 CKKSGQ--DASALLARMAEVSERVKTLDAELTEVETAERDWLMSVPNMPHESVPVGASEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N ++RS G+KP +EH+E+G ALG +DF+RA KL+G+RF++ G A LERAL Q Sbjct: 119 DNPVVRSWGEKPVMDFEPKEHWELGTALGGLDFERAAKLAGSRFALSFGWCARLERALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+D T+ HGYTEV P +V M GTGQ+PKF +D+F +LIPT+EV LTN+ Sbjct: 179 FMLDTQTTLHGYTEVIPPYIVNRRTMTGTGQLPKFEEDLFKLEGVDSFLIPTAEVPLTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ E+I+ +LP++F P FRSEAGS G+DT+G++R HQF K E+V+ + S+ Sbjct: 239 YAGEVIDEAALPVKFCAHTPCFRSEAGSYGKDTKGLIRLHQFHKVEMVNFAHPDTSYEAL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M + AE+IL+ L +HYRV+ LCTGD+GF A KTYD+EVWL GQN YREISSCS CG+F Sbjct: 299 EAMTAAAEKILQLLGIHYRVIELCTGDMGFGATKTYDIEVWLPGQNQYREISSCSNCGDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R+R P SK ++ HTLNGSG+AVGRCL+A++EN ADGS+ IP L+PYM Sbjct: 359 QARRADIRFRSPGSKKNQYVHTLNGSGLAVGRCLVAVMENGQRADGSIVIPDALKPYMGG 418 Query: 420 LAVIKKE 426 L V++ + Sbjct: 419 LEVVEAK 425 >gi|282857769|ref|ZP_06266978.1| serine--tRNA ligase [Pyramidobacter piscolens W5455] gi|282584439|gb|EFB89798.1| serine--tRNA ligase [Pyramidobacter piscolens W5455] Length = 428 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 190/426 (44%), Positives = 278/426 (65%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI IR++ E + LK R+ + + +L+LD++ + L+ +E+++ARRN+ S ++G+ Sbjct: 1 MLDIHMIREDTEAVKAYLKARNNDFDVDKVLALDDERKKLLASVEEVKARRNAGSKEVGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G A+ +E L EQ+ + E+ L++L+ IPN P VP+G Sbjct: 61 IKAAGG--DAAAVMDEMRRLGEQIKADDARVAEIDEELRELMLQIPNRPDATVPVGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + H+++ EA GL+DF+R +++ +RF+V G A LERA+ Sbjct: 119 ENVEVRRWGAPRRFDFEPKAHWDVAEACGLLDFERGPRMAQSRFTVFKGLGARLERAIMN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 +M+D+HT +HGYTE + P++V E+M GTGQ+PKFA+D++ D W+IPT+EV LTN+ Sbjct: 179 YMLDMHTQKHGYTEFNVPVMVNSESMLGTGQLPKFAEDLYKVEKDDLWMIPTAEVPLTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ E++ LP +T P FR E+GS GRD RG++R HQF K E+V I E S+ E Sbjct: 239 HNGEMLSESELPKYYTAYTPCFRRESGSYGRDVRGIMRLHQFDKVEMVKICTPESSWDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEE+L+ L L YRV+ LCTGD+GF + KTYD+EVWL QN YREISSCS C +F Sbjct: 299 EKLTGNAEEVLQGLGLPYRVIVLCTGDMGFGSAKTYDVEVWLPSQNCYREISSCSNCVDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RRMN+RYR + ++ HTLNGSG+A+GR LIA+LEN NADGSV +P L PYM Sbjct: 359 QARRMNTRYRPADGGKPRYVHTLNGSGLAIGRTLIAVLENCQNADGSVDLPEALVPYMGG 418 Query: 420 LAVIKK 425 + I+ Sbjct: 419 VKHIEP 424 >gi|242280836|ref|YP_002992965.1| seryl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] gi|259511664|sp|C6BS43|SYS_DESAD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|242123730|gb|ACS81426.1| seryl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] Length = 425 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 189/427 (44%), Positives = 281/427 (65%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++++ N + + +L+KR + LD + + L++++E ++A RNS S +I + Sbjct: 1 MLDLKFVQNNLDVVRESLEKRGSKLDVNEFSDLDSRRKSLLQEVESLKAERNSTSGEIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + + ++ L+++ ++ ++ ++ +S +PN+P E VP G + + Sbjct: 61 IKREGG--DASEIIARMGEVSGKIKALDEDLKDIEAAEREWLSSVPNMPDESVPFGKTED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +IR G+KP REH+++ LG +DF+RA KL+GARF VL A LERAL Sbjct: 119 DNPVIRHWGEKPEFDFTPREHWDLAVELGGVDFERAAKLTGARFVVLKKWGARLERALTS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+D+ T +HGYTEV P +V ++++GTGQ+PKF +D+F ++IPT+EV LTNL Sbjct: 179 FMVDVQTMDHGYTEVIPPYIVNRDSLFGTGQLPKFEEDLFKLKNWEYYMIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E++ L + + P FRSEAGS G+DT+G++RQHQF K E+V + SF + Sbjct: 239 HRDEVLSEDDLSIAYCAPTPCFRSEAGSYGKDTKGLIRQHQFHKVEMVRFAHPDKSFEDL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M AEEILKRL LHYRV++LCTGD+GF + KTYD+EVWL GQ+ YREISSCS C +F Sbjct: 299 EKMTGHAEEILKRLGLHYRVITLCTGDMGFGSAKTYDIEVWLPGQDKYREISSCSNCVDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +++ +SK +F HTLNGSG+AVGR +A++ENY DGS+ IP LRPYM Sbjct: 359 QARRANIKFQPKDSKKKQFVHTLNGSGLAVGRTFVAVVENYQQKDGSIVIPEALRPYMGG 418 Query: 420 LAVIKKE 426 L VI E Sbjct: 419 LEVITAE 425 >gi|221195108|ref|ZP_03568164.1| seryl-tRNA synthetase [Atopobium rimae ATCC 49626] gi|221185011|gb|EEE17402.1| seryl-tRNA synthetase [Atopobium rimae ATCC 49626] Length = 427 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 196/428 (45%), Positives = 276/428 (64%), Gaps = 2/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R+NP+ +D A R + E LD + R +I ++E ++A RN+ S QIG Sbjct: 1 MLDIKFVRENPDVIDAACASRQNAHWDREKFFELDAERRSVIAEVESLQAERNAISKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG +A K + S KE++ L++ V L L++ IPN+P E VP G Sbjct: 61 LFMREGKKDEAEAAKQQVSANKERIAELDQRRGSVEEELTALVAAIPNIPDESVPYGVDD 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N +R G + H+++G LG++DFDR KL+G RF +L G A +ERAL Sbjct: 121 SDNPEVRRWGTPTEFDFEPKAHWDLGVDLGIIDFDRGVKLAGTRFYLLGGLGARMERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 FMID H ++ G+ E P++ ++++GTGQ+PKF DD++ +LIPT+EV LTN+ Sbjct: 181 NFMIDQH-NKAGFKEFWPPVITNHDSLFGTGQLPKFEDDLYHVQPDLYLIPTAEVQLTNI 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+++ LPL +T P FR EAGSAGRDTRG++R H+F K E+V ++ EDS + Sbjct: 240 HRGEILDADQLPLLYTAFTPCFREEAGSAGRDTRGIIRVHEFDKVEMVKFSKPEDSMNQL 299 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M++ AE+IL+ L L Y VV+LCTGDLGFSA K YD+EVWL N Y+EISSCS C +F Sbjct: 300 ESMVTEAEKILQLLKLPYHVVTLCTGDLGFSAAKCYDIEVWLPSYNNYKEISSCSNCKDF 359 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R++DP K + HTLNGSG+AVGR + AILENY N DGSVT+P L PYM Sbjct: 360 QARRAGIRFKDPAVKGTQLVHTLNGSGLAVGRTMAAILENYQNEDGSVTVPEALVPYMGG 419 Query: 420 LAVIKKEH 427 + VI+ E Sbjct: 420 VEVIRPED 427 >gi|86357454|ref|YP_469346.1| seryl-tRNA synthetase [Rhizobium etli CFN 42] gi|123512164|sp|Q2K967|SYS_RHIEC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|86281556|gb|ABC90619.1| seryl-tRNA synthetase (serine-tRNA ligase) protein [Rhizobium etli CFN 42] Length = 427 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 275/425 (64%), Positives = 337/425 (79%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR EP ++ +++LDEK R ++K +D+ +RRN+ S +IG Sbjct: 1 MLDIKWIRENPEALDAALAKRGAEPLAQTLVALDEKRRSAVQKTQDLLSRRNAASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ N L + LK E + +KE LP E+EE + + L +S IPNVP ++VP+G + Sbjct: 61 AMAQKNAELAEKLKAEVAEIKETLPAAEEEERTLSAELIDALSRIPNVPFDDVPVGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + R VG+KP H REHFEIGEALG MDF+RA KLSG+RF+VLTG LA LERALGQ Sbjct: 121 DNAVARIVGEKPRWNHTPREHFEIGEALGYMDFERAAKLSGSRFTVLTGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMIDLHT EHGYTEVS+PL+VR EA++GTG +PKF +D+F TTDGR+LIPT+EV+LTNL Sbjct: 181 FMIDLHTREHGYTEVSSPLMVRAEAVFGTGSLPKFEEDLFKTTDGRYLIPTAEVTLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT E S EHE Sbjct: 241 REEILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESSIAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LH+R ++LCTGD+GF + KTYDLEVWL GQN +REISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHFRTMTLCTGDMGFGSRKTYDLEVWLPGQNAFREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + K+ KF HTLNGSG AVGRCLIA+LENYLN DGSVTIP VL PYM L Sbjct: 361 ARRMNARYRGKDDKNNKFVHTLNGSGTAVGRCLIAVLENYLNEDGSVTIPDVLLPYMGGL 420 Query: 421 AVIKK 425 I++ Sbjct: 421 TKIER 425 >gi|254503029|ref|ZP_05115180.1| seryl-tRNA synthetase [Labrenzia alexandrii DFL-11] gi|222439100|gb|EEE45779.1| seryl-tRNA synthetase [Labrenzia alexandrii DFL-11] Length = 426 Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats. Identities = 236/425 (55%), Positives = 307/425 (72%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR+N + D AL KR EP + +++LD+ R I K+++ + RRN+ S +IG+ Sbjct: 1 MFDIKWIRENADAFDKALAKRGYEPSAANLIALDDSRRSHITKLQEAQERRNAASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ L +E + +K + E+EE ++ ++L++ ++ IPN+P ++VP G Sbjct: 61 AKGSGDDVRAQELIDEVAQIKAFIQSGEEEERKLIAALEEAMAVIPNLPHDDVPEGADEA 120 Query: 121 ENILIRSVGKKPSAIHL--SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+L ++ G+KP+ +EH+E+GE LG MDF A KLSG+RF VL G +A LERAL Sbjct: 121 GNVLYKTHGEKPAFTFNEAPKEHYELGEELGGMDFSTAAKLSGSRFVVLKGQIARLERAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 GQFMID+HT E+GYTEVS PLLV + +YGTGQ+PKF +D+F T +LIPT+EV LTN Sbjct: 181 GQFMIDMHTQENGYTEVSPPLLVHSDPLYGTGQLPKFEEDLFKTATDHYLIPTAEVPLTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L + EI+ LPLR T L FRSEAGSAGRDTRGMLRQHQF KCELVS+T E+S E Sbjct: 241 LVAGEIMSEDQLPLRVTALTYCFRSEAGSAGRDTRGMLRQHQFQKCELVSVTTPEESLNE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ERML CAE IL++L LHYRV++LCTGD+GF A KTYD+EVWL GQ+ +REISSCS CG+ Sbjct: 301 LERMLGCAEMILQKLGLHYRVMTLCTGDMGFGARKTYDIEVWLPGQDTFREISSCSVCGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRMN+R+R SK HTLNGSG+AVGR LIA+LENY NADGS+T+P VLRPYM Sbjct: 361 FQARRMNARFRPAGSKQPVHVHTLNGSGIAVGRALIAVLENYQNADGSITVPDVLRPYMG 420 Query: 419 NLAVI 423 L I Sbjct: 421 GLEKI 425 >gi|296131564|ref|YP_003638811.1| seryl-tRNA synthetase [Thermincola sp. JR] gi|296030142|gb|ADG80910.1| seryl-tRNA synthetase [Thermincola potens JR] Length = 423 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 200/424 (47%), Positives = 275/424 (64%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++IR NPE + AL KR + L LDE+ R L+ ++E ++ +RN S +IG+ Sbjct: 1 MLDIKFIRSNPEAVKEALSKRGAVLGLDNFLKLDEQRRELLVEVEQLKNKRNVVSEEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + + E + +++ L+++ EV +L + IPN+P E VP+G S Sbjct: 61 LKKQGQHP--EEMILEMRQVSQKIKELDEKVKEVEENLAGALLTIPNIPHESVPVGASDA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G+ + H++IGE L ++DF+RA K++GARF+ G A LERA+ Sbjct: 119 DNQEIRRWGEPRQFAFEPKAHWDIGENLDILDFERAAKIAGARFTFYKGLGARLERAVIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLHT EHGYTE+ P LV ++M GTGQ+PKF +DMF + IPT+EV +TN+ Sbjct: 179 FMLDLHTREHGYTEIFPPFLVNRDSMIGTGQLPKFEEDMFRIDSVDYFLIPTAEVPVTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI++ LPL + FR+EAG+ GRDTRG++RQHQF K ELV T+ EDSF E Sbjct: 239 YRGEILDGAQLPLYHVAYSACFRAEAGAHGRDTRGLIRQHQFNKVELVKFTKPEDSFEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AE++L+ L L YRVV+LCTGDLGFS+ KTYD+EVWL Y+EISSCS +F Sbjct: 299 EKLTANAEKVLQLLGLPYRVVTLCTGDLGFSSAKTYDIEVWLPSYQAYKEISSCSNFLDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSG+AVGR + AILENY DGSV +P VLRPYM Sbjct: 359 QARRANIRFRREAGSKPEFVHTLNGSGLAVGRTVAAILENYQQEDGSVVVPEVLRPYM-G 417 Query: 420 LAVI 423 + I Sbjct: 418 VDKI 421 >gi|149186947|ref|ZP_01865256.1| SerS, seryl-tRNA synthetase [Erythrobacter sp. SD-21] gi|148829456|gb|EDL47898.1| SerS, seryl-tRNA synthetase [Erythrobacter sp. SD-21] Length = 426 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 223/426 (52%), Positives = 292/426 (68%), Gaps = 1/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI +IR NP+ D ALK+R EP ++ I++LD K R ++++ ++RRN S IGQ Sbjct: 1 MHDIAFIRANPDAFDAALKRRGAEPVADRIVALDAKKREAQTRVQEAQSRRNEASKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ +G+ +ALK E + +K +P E+ E E S L L++ +PN+P ++VP G + Sbjct: 61 AMGQGDKEKAEALKAEVADIKASMPAWEEAEQEAASELTDLLARLPNMPADDVPDGADES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + + G+K + +EH +IG ALG MDF+ LSGARF+ L G +A L RAL Q Sbjct: 121 DNVEVATWGEKRAFAFEPKEHADIGPALG-MDFETGASLSGARFTFLRGDIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D T ++GY E + P+LV DEAMYGT ++PKFA+D F TTDGRWL+PTSEV LT Sbjct: 180 FMLDTQTRKNGYAECNPPVLVHDEAMYGTDKLPKFAEDSFQTTDGRWLVPTSEVPLTASV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I++ P+R T FRSEAGSAGRDTRG +RQHQF K ELVSI R EDS EHE Sbjct: 240 AGQILDEPVQPIRLTAHTLCFRSEAGSAGRDTRGFIRQHQFEKVELVSICRPEDSEAEHE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAE IL+ L L YR V LC GD+GF A KTYDLEVWL GQ YREISSCS G FQ Sbjct: 300 RMTACAEGILQALGLPYRKVLLCVGDMGFGAKKTYDLEVWLPGQGAYREISSCSNTGEFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR K +F HTLNGSG+AVGR L+A++ENY DGSVT+P L PYM + Sbjct: 360 ARRMNARYRPEGEKKTRFVHTLNGSGLAVGRTLVAVMENYQEEDGSVTVPECLAPYMGGV 419 Query: 421 AVIKKE 426 A ++ + Sbjct: 420 AKLEPQ 425 >gi|326386512|ref|ZP_08208135.1| seryl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370] gi|326209173|gb|EGD59967.1| seryl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370] Length = 426 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 227/425 (53%), Positives = 296/425 (69%), Gaps = 1/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NPE D A+ +R L P ++ ILS D R L+ ++++ +ARRN S IG Sbjct: 1 MHDIRLIRENPEAFDAAMARRGLAPAAQAILSADADRRDLLTRMQEAQARRNEASKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ +G+ +ALK E ++LK+ LP +E++E + L +++ +PN P ++VP G + Sbjct: 61 AMGKGDKDTAEALKAEVASLKDALPAMEEDERRLTGELNAVLAALPNRPADDVPAGEDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ + G REH +IG ALG +DF+ +SGARF+ L G +A L RAL Q Sbjct: 121 ANVEVLRWGTPREFAFTPREHADIGPALG-LDFETGALISGARFTFLRGQMARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D T +GYTE + PL+VRDEA++GTGQ+PKFA+D+F TTDGRWLIPT+EVSLTN Sbjct: 180 FMLDFQTGTNGYTECATPLMVRDEAVFGTGQLPKFAEDLFRTTDGRWLIPTAEVSLTNSV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +I+ +LPLR T L P FRSEAG+AGRDTRG +RQHQF K ELVSITR EDS EHE Sbjct: 240 REQILTDAALPLRMTALTPCFRSEAGAAGRDTRGFIRQHQFEKVELVSITRPEDSEAEHE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM A+ +L+ LDL YR V LC GD+GF+A KTYDLEVWL GQN YREISSCS CG+FQ Sbjct: 300 RMTGAAQAVLEALDLPYRKVVLCEGDMGFTARKTYDLEVWLPGQNTYREISSCSNCGDFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR +K +F HTLNGSG+AVGR L+A+LENY DGSV +P L PYM + Sbjct: 360 ARRMNARYRPEGAKGTEFVHTLNGSGLAVGRTLVAVLENYQQEDGSVEVPAALAPYMGGI 419 Query: 421 AVIKK 425 + Sbjct: 420 TRLVP 424 >gi|326794640|ref|YP_004312460.1| Seryl-tRNA synthetase [Marinomonas mediterranea MMB-1] gi|326545404|gb|ADZ90624.1| Seryl-tRNA synthetase [Marinomonas mediterranea MMB-1] Length = 432 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 202/430 (46%), Positives = 277/430 (64%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +R +P+ + LKK+ E SL+E+ + + + E+++ RNS S QIGQ Sbjct: 1 MLDIKALRTDPDAIAAKLKKKGFELDVAAFSSLEERRKAIQVETENLQQSRNSVSKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ G+ + D LK +T+TL + L ++ ++V + L+ L+ IPN+P E VP G S + Sbjct: 61 AMKSGDKAKADELKAQTATLGDDLTKAKEALNQVQTDLELLLEGIPNIPHESVPEGVSED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI IR G+ + +++H ++GEALG +DF+ A K++G+RF+V+ LA L RAL Q Sbjct: 121 DNIEIRRWGEPRTFDFEAKDHVDLGEALGGLDFELAVKITGSRFAVMRADLARLHRALTQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------TDGRWLIPTSE 233 FMI+ H EHGY+EV P LV ++ GTGQ+PKF D+F +LIPT+E Sbjct: 181 FMINTHADEHGYSEVYVPYLVNAHSLKGTGQLPKFEKDLFKVPVDKDSGNSDLYLIPTAE 240 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TN+ EI L ++ P FRSEAGS GRDTRGM+RQHQF K ELV I R + Sbjct: 241 VPVTNIARDEIFNDSDLHHKYVAHTPCFRSEAGSYGRDTRGMIRQHQFEKVELVHICRPD 300 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E ++ AE IL++L L YR V LC GDLGFSA KTYD+EVWL GQ YREISSC Sbjct: 301 RSTEILEELVGHAETILQKLGLPYRTVILCGGDLGFSAHKTYDIEVWLPGQGKYREISSC 360 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY N DGS+ IP VL Sbjct: 361 SNMWDFQARRMQARWRNPETGKPELAHTLNGSGLAVGRTLVAVLENYQNEDGSIDIPDVL 420 Query: 414 RPYMNNLAVI 423 PYM + Sbjct: 421 VPYMGGKTKL 430 >gi|83311620|ref|YP_421884.1| seryl-tRNA synthetase [Magnetospirillum magneticum AMB-1] gi|123541738|sp|Q2W4A0|SYS_MAGSA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|82946461|dbj|BAE51325.1| Seryl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 422 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 229/423 (54%), Positives = 296/423 (69%), Gaps = 2/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ IR NP+ D LK+R LEP++ IL LD + R ++++ARRN S QIG Sbjct: 1 MHDLKSIRDNPDGFDAGLKRRGLEPKAAAILDLDTRRRAAQTAFQEMQARRNDASKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G AL +E ++LKE++P E+E+ + + ++ +++ IPN+P +VP G + Sbjct: 61 LKKSGG--DASALMDEVASLKERMPAAEEEDKALGAEIESILASIPNLPASDVPDGPDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G S + +H IG LGLMDFD A KLSGARF VL G LA L+RA+GQ Sbjct: 119 HNVELRKWGTPKSFAFTALDHDAIGAKLGLMDFDGAAKLSGARFVVLKGQLARLQRAIGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DL T EHGYTE+ PL+V+D A +GTGQ+PKF +D+F T G WLIPT+EV LTNL Sbjct: 179 FMLDLQTVEHGYTEMDPPLMVKDGAAFGTGQLPKFGEDLFKTNTGHWLIPTAEVPLTNLV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S EI++ K+LPLR T L P FRSEAG+AG+DTRGM+RQHQF K E+VSI + S EHE Sbjct: 239 SDEILDEKALPLRMTALTPCFRSEAGAAGKDTRGMIRQHQFHKVEMVSIAHPDASGAEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +L+RL L YRV+ LCTGD+GFSA KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 299 RMTQCAETVLQRLGLAYRVIVLCTGDMGFSAQKTYDIEVWLPGQQRYREISSCSNCGDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +R+R K +F HTLNGSG+AVGR LIA++ENY DG++ +P LRPYM L Sbjct: 359 ARRMKARFRPEGEKGTRFVHTLNGSGLAVGRTLIAVMENYQREDGTIEVPEALRPYMGGL 418 Query: 421 AVI 423 VI Sbjct: 419 EVI 421 >gi|152969482|ref|YP_001334591.1| seryl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893954|ref|YP_002918688.1| seryl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|166222736|sp|A6T6Z0|SYS_KLEP7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|150954331|gb|ABR76361.1| seryl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546270|dbj|BAH62621.1| seryl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 430 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 203/431 (47%), Positives = 272/431 (63%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L EQL + E + + ++ + IPN+P ++VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEQLDAAKSELETLLAEIRDIALAIPNIPHDDVPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE G +DF A KL+G+RF V+ G LA L RAL Q Sbjct: 119 DNVEVSRWGTPRQFDFEVRDHVTLGEMHGGLDFAAAVKLTGSRFVVMKGQLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR V+LCTGD+GFSACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + IP V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVALMENYQQADGRIEIPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMRGLEYI 429 >gi|308186248|ref|YP_003930379.1| Seryl-tRNA synthetase [Pantoea vagans C9-1] gi|308056758|gb|ADO08930.1| Seryl-tRNA synthetase [Pantoea vagans C9-1] Length = 430 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 204/431 (47%), Positives = 272/431 (63%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + E + SL+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGYKLDVETLRSLEERRKVLQVETENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E E+ + ++ +PN+P +EVP+G + Sbjct: 61 AKARG--EDIEPLRQEVNALGERLDAAKAELDELQNQIRDFALALPNIPADEVPLGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN + G ++H E+GEA +DF A KL+G+RF V+ G +A L RAL Q Sbjct: 119 ENQEVSRWGTPREFSFQVKDHVELGEAAKGLDFAAAVKLTGSRFVVMQGQIARLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FMIDLHT +HGY E P LV E +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMIDLHTEQHGYLETYVPYLVNHETLYGTGQLPKFGEDLFHTRPLEEQSDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E SLP++ T P FRSEAGS GRDTRG++R HQF K E+V I Sbjct: 239 EVPLTNLMRDEIVEEDSLPVKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVTP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL QN YREISS Sbjct: 299 EQSMDALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSTKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +RYR+ K + HTLNGSG+AVGR L+A+LENY DG +T+P V Sbjct: 359 CSNMGDFQARRMQARYRNKQEKKPRLVHTLNGSGLAVGRTLVAVLENYQQEDGRITVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN + VI Sbjct: 419 LRPYMNGVDVI 429 >gi|152997258|ref|YP_001342093.1| seryl-tRNA synthetase [Marinomonas sp. MWYL1] gi|189083573|sp|A6W0C9|SYS_MARMS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|150838182|gb|ABR72158.1| seryl-tRNA synthetase [Marinomonas sp. MWYL1] Length = 433 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 201/432 (46%), Positives = 274/432 (63%), Gaps = 7/432 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +R +PE + LKK+ E SL+E+ + + + E ++ RNS S +IGQ Sbjct: 1 MLDIKALRADPEAIAAQLKKKGYELDVATFSSLEERRKAIQVETEQLQQARNSVSKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ G+ LK +T+TL + L + + +V L+ L+ IPN+P VP G + + Sbjct: 61 AMKSGDKDKAAELKAQTATLGDDLEAAKTQLTQVQEELESLLEGIPNLPHASVPEGKTED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G ++H ++GEA+ ++DF+ A K++G+RF+V+ LA L RAL Q Sbjct: 121 DNVEIRRWGTPKQFDFEPKDHVDLGEAMEMLDFEAAVKITGSRFAVMHSDLARLHRALTQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------TDGRWLIPTSE 233 FMI+ H HGYTEV P LV ++ GTGQ+PKF D+F + +LIPT+E Sbjct: 181 FMINTHADLHGYTEVYVPYLVNAHSLKGTGQLPKFEADLFKVPVDKDSGNNDLYLIPTAE 240 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL EI+ L +F P FRSEAGS GRDTRGM+RQHQF K ELV + R + Sbjct: 241 VPVTNLVRDEILNDADLHKKFVAHTPCFRSEAGSYGRDTRGMIRQHQFEKVELVHVCRPD 300 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E ++ AE IL++L+L YR V LC GDLGFSA KTYD+EVWL GQ YREISSC Sbjct: 301 ISEQVLEELVGHAEVILQKLELPYRTVILCGGDLGFSAHKTYDIEVWLPGQGKYREISSC 360 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY NADGSV +P VL Sbjct: 361 SNMWDFQARRMQARWRNPETGRPELAHTLNGSGLAVGRTLVAVLENYQNADGSVRVPDVL 420 Query: 414 RPYMNNLAVIKK 425 PYM V+KK Sbjct: 421 VPYMGGKTVLKK 432 >gi|82777585|ref|YP_403934.1| seryl-tRNA synthetase [Shigella dysenteriae Sd197] gi|309784010|ref|ZP_07678654.1| seryl-tRNA synthetase [Shigella dysenteriae 1617] gi|123769580|sp|Q32E12|SYS_SHIDS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|81241733|gb|ABB62443.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Shigella dysenteriae Sd197] gi|308928153|gb|EFP73616.1| seryl-tRNA synthetase [Shigella dysenteriae 1617] Length = 430 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 270/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSCWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|262041004|ref|ZP_06014225.1| serine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041639|gb|EEW42689.1| serine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 430 Score = 448 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 202/431 (46%), Positives = 271/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L EQL + E + + ++ + IPN+P ++VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEQLDAAKSELETLLAEIRDIALAIPNIPHDDVPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE G +DF A KL+G+RF V+ G LA L RAL Q Sbjct: 119 DNVEVSRWGTPRQFDFEVRDHVTLGEMHGGLDFAAAVKLTGSRFVVMKGQLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLH +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHIEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR V+LCTGD+GFSACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + IP V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVALMENYQQADGRIEIPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMRGLEYI 429 >gi|333008793|gb|EGK28253.1| seryl-tRNA synthetase [Shigella flexneri K-272] gi|333020323|gb|EGK39589.1| seryl-tRNA synthetase [Shigella flexneri K-227] Length = 430 Score = 448 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 270/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLAEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|159184878|ref|NP_354691.2| seryl-tRNA synthetase [Agrobacterium tumefaciens str. C58] gi|30173186|sp|Q8UEQ2|SYS_AGRT5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|159140158|gb|AAK87476.2| seryl-tRNA synthetase [Agrobacterium tumefaciens str. C58] Length = 427 Score = 448 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 277/425 (65%), Positives = 344/425 (80%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR+NPE D AL +R +EP + +++LDEK R +I+ ++D+++RRN+ S +IG Sbjct: 1 MHDIKWIRENPEAFDAALARRSVEPAAAGLIALDEKRRSVIQSLQDMQSRRNAASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ N+ L + LK E + +KE +P E+E+ +V + L +S +PN+P ++VP G + Sbjct: 61 AMAQKNMELAEKLKAEVADIKENMPRAEEEDRQVSAELNDALSRLPNMPFDDVPDGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++ R G+KP H ++EHFEIGEALG MDF+RA KLSG+RF+VLT LA LERALGQ Sbjct: 121 DNVVARVTGQKPGWNHAAKEHFEIGEALGYMDFERAAKLSGSRFTVLTSQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMIDLHTSEHGYTEVS+PL+VRDEAM+GTGQ+PKFA+D+F TTDGRWLIPT+EV+LTNL Sbjct: 181 FMIDLHTSEHGYTEVSSPLMVRDEAMFGTGQLPKFAEDLFRTTDGRWLIPTAEVTLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S EI+E + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT E + EHE Sbjct: 241 SGEILEQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESAVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LH+R ++LCTGD+GFSA KTYDLEVWL GQN YREISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHFRTLTLCTGDMGFSARKTYDLEVWLPGQNTYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + K+ KF HTLNGSG AVGRCLIA+LENYLN DGSVTIP VL PYM L Sbjct: 361 ARRMNARYRGKDDKATKFVHTLNGSGTAVGRCLIAVLENYLNDDGSVTIPDVLLPYMGGL 420 Query: 421 AVIKK 425 I+K Sbjct: 421 TRIEK 425 >gi|329998190|ref|ZP_08303002.1| serine--tRNA ligase [Klebsiella sp. MS 92-3] gi|328538805|gb|EGF64880.1| serine--tRNA ligase [Klebsiella sp. MS 92-3] Length = 430 Score = 448 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 203/431 (47%), Positives = 271/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L EQL + E + + ++ + IPN+P ++VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEQLDAAKSELETLLAEIRDIALAIPNIPHDDVPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE G +DF A KL+G+RF V+ G LA L RAL Q Sbjct: 119 DNVEVSRWGTPRQFDFEVRDHVTLGEMHGGLDFAAAVKLTGSRFVVMKGQLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIINEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR V+LCTGD+GFSACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + IP V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVALMENYQQADGRIEIPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMRGLEYI 429 >gi|118589124|ref|ZP_01546531.1| seryl-tRNA synthetase [Stappia aggregata IAM 12614] gi|118438453|gb|EAV45087.1| seryl-tRNA synthetase [Stappia aggregata IAM 12614] Length = 426 Score = 448 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 233/425 (54%), Positives = 310/425 (72%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR+N D AL KR E + +++LD+ R I K+++ + RRN+ S +IG+ Sbjct: 1 MFDIRWIRENAAAFDQALAKRGYEASAAKLIALDDSRRSHITKLQEAQERRNAASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ + L +E + +K + E+EE ++ + L+ ++ IPN+P ++VP+G Sbjct: 61 AKGSGDDARAQELIDEVAQIKAFIQSGEEEERKLIADLEAAMAVIPNLPHDDVPVGEDET 120 Query: 121 ENILIRSVGKKPSAIHL--SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+L+++ G+KP +EH+E+GE LG MDF +A KLSG+RF +L G +A LERAL Sbjct: 121 DNVLLKTHGEKPVFTFNEAPKEHYELGEDLGGMDFAKAAKLSGSRFVILKGQIARLERAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 GQFMIDLHT E+GYTEVS PLLV E +YGTGQ+PKF +D+F TT +LIPT+E+ LTN Sbjct: 181 GQFMIDLHTQENGYTEVSPPLLVHSEPLYGTGQLPKFEEDLFKTTTDHYLIPTAEIPLTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L + EI+ LPLR T L FRSEAGSAGRDTRGMLRQHQF KCELVS+T+ E+S E Sbjct: 241 LVAGEILPEDQLPLRVTALTYCFRSEAGSAGRDTRGMLRQHQFQKCELVSVTKPEESLDE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ERML CAE++L++L LHYRV++LC+GD+GF A KTYD+EVWL GQ+ YREISSCS CG+ Sbjct: 301 LERMLGCAEKVLQKLGLHYRVMTLCSGDMGFGARKTYDIEVWLPGQDTYREISSCSVCGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRMN+R+R +SK HTLNGSG+AVGR LIA+LENY N DG++T+P VLRPYM Sbjct: 361 FQARRMNARFRPADSKQPVHVHTLNGSGIAVGRALIAVLENYQNGDGTITVPEVLRPYMG 420 Query: 419 NLAVI 423 L I Sbjct: 421 GLEKI 425 >gi|241204418|ref|YP_002975514.1| seryl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858308|gb|ACS55975.1| seryl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 427 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 277/425 (65%), Positives = 340/425 (80%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR EP ++ +++LDEK R ++K +D+ +RRN S +IG Sbjct: 1 MLDIKWIRENPEALDAALAKRGAEPLAQSLVALDEKRRSAVQKAQDLLSRRNLASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ N L + LK E S LK LP +E+E+ ++ + L +S IPN+P ++VP+G + Sbjct: 61 AMAQKNGELAEKLKAEVSELKTLLPAIEEEDRQLTAELNDALSRIPNIPFDDVPVGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++ R+VG+KP H +EHFEIGEALG MDF+RA KLSG+RF+VLTG LA LERALGQ Sbjct: 121 DNVVTRTVGEKPRWNHAPKEHFEIGEALGYMDFERAAKLSGSRFTVLTGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMIDLHTSEHGY+EVS+PL+VRDEA+YGT Q+PKFADD+F TTDGRWLIPT+EV+LTNL Sbjct: 181 FMIDLHTSEHGYSEVSSPLMVRDEAVYGTAQLPKFADDLFRTTDGRWLIPTAEVTLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT E + EHE Sbjct: 241 REEILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESAVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LH+R ++LCTGD+GF + KTYDLEVWL GQN +REISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHFRTMTLCTGDMGFGSRKTYDLEVWLPGQNAFREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR K+ KF HTLNGSG AVGRCLIA+LENYLN DGSVTIP VL PYM L Sbjct: 361 GRRMNARYRGKEDKNNKFVHTLNGSGTAVGRCLIAVLENYLNEDGSVTIPDVLLPYMGGL 420 Query: 421 AVIKK 425 I++ Sbjct: 421 TKIER 425 >gi|187730384|ref|YP_001880909.1| seryl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|238691690|sp|B2TUI5|SYS_SHIB3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|187427376|gb|ACD06650.1| seryl-tRNA synthetase [Shigella boydii CDC 3083-94] Length = 430 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 271/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G +++L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIESLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|325293088|ref|YP_004278952.1| Seryl-tRNA synthetase [Agrobacterium sp. H13-3] gi|325060941|gb|ADY64632.1| Seryl-tRNA synthetase [Agrobacterium sp. H13-3] Length = 427 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 277/425 (65%), Positives = 343/425 (80%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR+NPE D AL +R EP + +++LDEK R +I+ ++D+++RRN+ S IG Sbjct: 1 MHDIKWIRENPEAFDAALARRGAEPAASSLIALDEKRRSVIQSLQDMQSRRNAASKDIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ N+ L + LK E + +KE +P E+E+ +V + L +S +PN+P ++VP G + Sbjct: 61 AMAQKNMELAEKLKAEVADIKENMPRAEEEDRQVTAELNDALSRLPNIPFDDVPDGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++ R VG+KP H ++EHFEIGEALG MDF+RA KLSG+RF+VLT LA LERALGQ Sbjct: 121 DNVVTRVVGQKPGWNHEAKEHFEIGEALGYMDFERAAKLSGSRFTVLTSQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMIDLHTSEHGYTEVS+PL+VRDEAM+GTGQ+PKF++D+F TTDGRWLIPT+EV+LTNL Sbjct: 181 FMIDLHTSEHGYTEVSSPLMVRDEAMFGTGQLPKFSEDLFKTTDGRWLIPTAEVTLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S EI+E + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT E + EHE Sbjct: 241 SGEILEQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESAVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LH+R ++LCTGD+GFSA KTYDLEVWL GQN YREISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHFRTMTLCTGDMGFSARKTYDLEVWLPGQNTYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + K+ KF HTLNGSG AVGRCLIA+LENYLN DGSVTIP VL PYM L Sbjct: 361 ARRMNARYRGKDDKATKFVHTLNGSGTAVGRCLIAVLENYLNDDGSVTIPNVLLPYMGGL 420 Query: 421 AVIKK 425 I+K Sbjct: 421 KRIEK 425 >gi|170769264|ref|ZP_02903717.1| seryl-tRNA synthetase [Escherichia albertii TW07627] gi|170121916|gb|EDS90847.1| seryl-tRNA synthetase [Escherichia albertii TW07627] Length = 430 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 270/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPRKFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|193070743|ref|ZP_03051678.1| seryl-tRNA synthetase [Escherichia coli E110019] gi|192955936|gb|EDV86404.1| seryl-tRNA synthetase [Escherichia coli E110019] Length = 430 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 270/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQTEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|254449273|ref|ZP_05062720.1| seryl-tRNA synthetase [gamma proteobacterium HTCC5015] gi|198261128|gb|EDY85426.1| seryl-tRNA synthetase [gamma proteobacterium HTCC5015] Length = 427 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 205/429 (47%), Positives = 274/429 (63%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + + AL KR + L+ + + + +D++ RN+ S IGQ Sbjct: 1 MLDPKRLRSDLDAVADALTKRGFTLDKDQFSQLEARRKSEQTRTQDLQNERNTRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ LK + L ++L E E + S L +L+ IPN P E VP G + Sbjct: 61 AKAAG--EDIEPLKAAVAELGKELAQSEGELKTIQSELDELVLGIPNEPHETVPEGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ S ++H +GE G MDF+ A+K++G+RF VL G + L RAL Q Sbjct: 119 DNVEVSRWGEPKSFEFDVKDHVALGEHKGWMDFEEASKITGSRFVVLRGAMCRLHRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEVS 235 FM+D H +HGY EV P +V +++YGTGQ+PKF +D+F + +LIPT+EV Sbjct: 179 FMLDTHADQHGYQEVYVPYIVNQDSLYGTGQLPKFGEDLFKIEREGEDNSFYLIPTAEVP 238 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TN+ I E K LPL+ P FRSEAGS GRDTRGM+RQHQF K ELV + + EDS Sbjct: 239 VTNMARDVIYEEKDLPLKRVAHTPCFRSEAGSYGRDTRGMIRQHQFEKVELVQLVKPEDS 298 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E + AE IL++L+L YR V LC GDLGFSA KTYDLEVWL GQ+ YREISSCS Sbjct: 299 WQALEELCGHAETILQKLELPYRKVVLCGGDLGFSAAKTYDLEVWLPGQSAYREISSCSN 358 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RRM +RYR P+SK + HTLNGSG+AVGR LIA+LENY NADGSVT+P VLRP Sbjct: 359 FVDFQARRMKARYRSPDSKKPELLHTLNGSGLAVGRALIAVLENYQNADGSVTVPEVLRP 418 Query: 416 YMNNLAVIK 424 YM L V+K Sbjct: 419 YMGGLDVLK 427 >gi|116251809|ref|YP_767647.1| seryl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|166223278|sp|Q1MHM2|SYS_RHIL3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|115256457|emb|CAK07541.1| putative seryl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 427 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 278/425 (65%), Positives = 340/425 (80%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR EP ++ +++LDEK R ++K +D+ +RRN S +IG Sbjct: 1 MLDIKWIRENPEALDAALAKRGAEPLAQSLVALDEKRRSAVQKAQDLLSRRNLASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ N L + LK E S LK LP +E+E+ ++ + L +S IPN+P ++VP+G + Sbjct: 61 AMAQKNSELAEKLKAEVSELKTLLPAIEEEDRQLTAELNDALSRIPNIPFDDVPVGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI+ R+VG+KP H +EHFEIGEALG MDF+RA KLSG+RF+VLTG LA LERALGQ Sbjct: 121 DNIVTRTVGEKPRWNHAPKEHFEIGEALGYMDFERAAKLSGSRFTVLTGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMIDLHTSEHGY EVS+PL+VRDEA+YGT Q+PKFA+D+F TTDGRWLIPT+EV+LTNL Sbjct: 181 FMIDLHTSEHGYIEVSSPLMVRDEAVYGTAQLPKFAEDLFRTTDGRWLIPTAEVTLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT E + EHE Sbjct: 241 REEILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESAVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LH+R ++LCTGD+GF + KTYDLEVWL GQN +REISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHFRTMTLCTGDMGFGSRKTYDLEVWLPGQNAFREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR + KS KF HTLNGSG AVGRCLIA+LENYLN DGSVTIP VL PYM L Sbjct: 361 GRRMNARYRGKDDKSNKFVHTLNGSGTAVGRCLIAVLENYLNEDGSVTIPDVLLPYMGGL 420 Query: 421 AVIKK 425 I++ Sbjct: 421 TKIER 425 >gi|218548415|ref|YP_002382206.1| seryl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|226701416|sp|B7LN61|SYS_ESCF3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|218355956|emb|CAQ88572.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia fergusonii ATCC 35469] gi|324113810|gb|EGC07785.1| seryl-tRNA synthetase [Escherichia fergusonii B253] gi|325496838|gb|EGC94697.1| seryl-tRNA synthetase [Escherichia fergusonii ECD227] Length = 430 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 270/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|15830232|ref|NP_309005.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|16128860|ref|NP_415413.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli str. K-12 substr. MG1655] gi|24112268|ref|NP_706778.1| seryl-tRNA synthetase [Shigella flexneri 2a str. 301] gi|26246919|ref|NP_752959.1| seryl-tRNA synthetase [Escherichia coli CFT073] gi|30062380|ref|NP_836551.1| seryl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|74311451|ref|YP_309870.1| seryl-tRNA synthetase [Shigella sonnei Ss046] gi|82543379|ref|YP_407326.1| seryl-tRNA synthetase [Shigella boydii Sb227] gi|89107743|ref|AP_001523.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli str. K-12 substr. W3110] gi|91209938|ref|YP_539924.1| seryl-tRNA synthetase [Escherichia coli UTI89] gi|110641093|ref|YP_668823.1| seryl-tRNA synthetase [Escherichia coli 536] gi|110804894|ref|YP_688414.1| seryl-tRNA synthetase [Shigella flexneri 5 str. 8401] gi|117623077|ref|YP_851990.1| seryl-tRNA synthetase [Escherichia coli APEC O1] gi|157157556|ref|YP_001462091.1| seryl-tRNA synthetase [Escherichia coli E24377A] gi|157160416|ref|YP_001457734.1| seryl-tRNA synthetase [Escherichia coli HS] gi|168752125|ref|ZP_02777147.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|168756984|ref|ZP_02781991.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|168762973|ref|ZP_02787980.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|168769886|ref|ZP_02794893.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|168776256|ref|ZP_02801263.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|168783803|ref|ZP_02808810.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|168787321|ref|ZP_02812328.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|168801425|ref|ZP_02826432.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|170020705|ref|YP_001725659.1| seryl-tRNA synthetase [Escherichia coli ATCC 8739] gi|170080551|ref|YP_001729871.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli str. K-12 substr. DH10B] gi|170683015|ref|YP_001744277.1| seryl-tRNA synthetase [Escherichia coli SMS-3-5] gi|188492608|ref|ZP_02999878.1| seryl-tRNA synthetase [Escherichia coli 53638] gi|191167614|ref|ZP_03029425.1| seryl-tRNA synthetase [Escherichia coli B7A] gi|191172133|ref|ZP_03033677.1| seryl-tRNA synthetase [Escherichia coli F11] gi|193064674|ref|ZP_03045753.1| seryl-tRNA synthetase [Escherichia coli E22] gi|194428395|ref|ZP_03060936.1| seryl-tRNA synthetase [Escherichia coli B171] gi|194438706|ref|ZP_03070793.1| seryl-tRNA synthetase [Escherichia coli 101-1] gi|195939556|ref|ZP_03084938.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024] gi|208808989|ref|ZP_03251326.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208815536|ref|ZP_03256715.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208822033|ref|ZP_03262352.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209396596|ref|YP_002269566.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|209918142|ref|YP_002292226.1| seryl-tRNA synthetase [Escherichia coli SE11] gi|215486023|ref|YP_002328454.1| seryl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|217326397|ref|ZP_03442481.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|218553479|ref|YP_002386392.1| seryl-tRNA synthetase [Escherichia coli IAI1] gi|218557801|ref|YP_002390714.1| seryl-tRNA synthetase [Escherichia coli S88] gi|218688681|ref|YP_002396893.1| seryl-tRNA synthetase [Escherichia coli ED1a] gi|218694366|ref|YP_002402033.1| seryl-tRNA synthetase [Escherichia coli 55989] gi|218700589|ref|YP_002408218.1| seryl-tRNA synthetase [Escherichia coli IAI39] gi|218704322|ref|YP_002411841.1| seryl-tRNA synthetase [Escherichia coli UMN026] gi|227884140|ref|ZP_04001945.1| seryl-tRNA synthetase [Escherichia coli 83972] gi|237707117|ref|ZP_04537598.1| seryl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|238900151|ref|YP_002925947.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli BW2952] gi|253774078|ref|YP_003036909.1| seryl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161007|ref|YP_003044115.1| seryl-tRNA synthetase [Escherichia coli B str. REL606] gi|254792093|ref|YP_003076930.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|256020979|ref|ZP_05434844.1| seryl-tRNA synthetase [Shigella sp. D9] gi|256023406|ref|ZP_05437271.1| seryl-tRNA synthetase [Escherichia sp. 4_1_40B] gi|260843143|ref|YP_003220921.1| seryl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|260854184|ref|YP_003228075.1| seryl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|260867065|ref|YP_003233467.1| seryl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|261227398|ref|ZP_05941679.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli O157:H7 str. FRIK2000] gi|261256179|ref|ZP_05948712.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966] gi|291281896|ref|YP_003498714.1| Seryl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|293404200|ref|ZP_06648194.1| seryl-tRNA synthetase [Escherichia coli FVEC1412] gi|293409271|ref|ZP_06652847.1| seryl-tRNA synthetase [Escherichia coli B354] gi|293414175|ref|ZP_06656824.1| seryl-tRNA synthetase [Escherichia coli B185] gi|293433190|ref|ZP_06661618.1| seryl-tRNA synthetase [Escherichia coli B088] gi|297518813|ref|ZP_06937199.1| seryl-tRNA synthetase [Escherichia coli OP50] gi|298379981|ref|ZP_06989586.1| seryl-tRNA synthetase [Escherichia coli FVEC1302] gi|300817005|ref|ZP_07097224.1| seryl-tRNA synthetase [Escherichia coli MS 107-1] gi|300823632|ref|ZP_07103759.1| seryl-tRNA synthetase [Escherichia coli MS 119-7] gi|300896500|ref|ZP_07115024.1| seryl-tRNA synthetase [Escherichia coli MS 198-1] gi|300902950|ref|ZP_07120894.1| seryl-tRNA synthetase [Escherichia coli MS 84-1] gi|300921073|ref|ZP_07137457.1| seryl-tRNA synthetase [Escherichia coli MS 115-1] gi|300926531|ref|ZP_07142320.1| seryl-tRNA synthetase [Escherichia coli MS 182-1] gi|300929586|ref|ZP_07145049.1| seryl-tRNA synthetase [Escherichia coli MS 187-1] gi|300937613|ref|ZP_07152422.1| seryl-tRNA synthetase [Escherichia coli MS 21-1] gi|300949747|ref|ZP_07163724.1| seryl-tRNA synthetase [Escherichia coli MS 116-1] gi|300954716|ref|ZP_07167151.1| seryl-tRNA synthetase [Escherichia coli MS 175-1] gi|300978543|ref|ZP_07174296.1| seryl-tRNA synthetase [Escherichia coli MS 45-1] gi|300983196|ref|ZP_07176475.1| seryl-tRNA synthetase [Escherichia coli MS 200-1] gi|301022878|ref|ZP_07186711.1| seryl-tRNA synthetase [Escherichia coli MS 69-1] gi|301024412|ref|ZP_07188097.1| seryl-tRNA synthetase [Escherichia coli MS 196-1] gi|301047849|ref|ZP_07194899.1| seryl-tRNA synthetase [Escherichia coli MS 185-1] gi|301302500|ref|ZP_07208631.1| seryl-tRNA synthetase [Escherichia coli MS 124-1] gi|301325784|ref|ZP_07219232.1| seryl-tRNA synthetase [Escherichia coli MS 78-1] gi|301646338|ref|ZP_07246226.1| seryl-tRNA synthetase [Escherichia coli MS 146-1] gi|306812651|ref|ZP_07446844.1| seryl-tRNA synthetase [Escherichia coli NC101] gi|307137521|ref|ZP_07496877.1| seryl-tRNA synthetase [Escherichia coli H736] gi|307311720|ref|ZP_07591360.1| seryl-tRNA synthetase [Escherichia coli W] gi|309795298|ref|ZP_07689716.1| seryl-tRNA synthetase [Escherichia coli MS 145-7] gi|312969039|ref|ZP_07783246.1| seryl-tRNA synthetase [Escherichia coli 2362-75] gi|312971020|ref|ZP_07785199.1| seryl-tRNA synthetase [Escherichia coli 1827-70] gi|331641414|ref|ZP_08342549.1| serine--tRNA ligase [Escherichia coli H736] gi|331646160|ref|ZP_08347263.1| serine--tRNA ligase [Escherichia coli M605] gi|331651912|ref|ZP_08352931.1| serine--tRNA ligase [Escherichia coli M718] gi|331656965|ref|ZP_08357927.1| serine--tRNA ligase [Escherichia coli TA206] gi|331662308|ref|ZP_08363231.1| serine--tRNA ligase [Escherichia coli TA143] gi|331667267|ref|ZP_08368132.1| serine--tRNA ligase [Escherichia coli TA271] gi|331672434|ref|ZP_08373224.1| serine--tRNA ligase [Escherichia coli TA280] gi|331676680|ref|ZP_08377376.1| serine--tRNA ligase [Escherichia coli H591] gi|331682402|ref|ZP_08383021.1| serine--tRNA ligase [Escherichia coli H299] gi|332282204|ref|ZP_08394617.1| seryl-tRNA synthetase [Shigella sp. D9] gi|67473027|sp|P0A8L1|SYS_ECOLI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67473028|sp|P0A8L2|SYS_ECOL6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67473029|sp|P0A8L3|SYS_ECO57 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67473030|sp|P0A8L4|SYS_SHIFL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|122424423|sp|Q1RE21|SYS_ECOUT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|122957696|sp|Q0T8M9|SYS_SHIF8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123049332|sp|Q0TJF7|SYS_ECOL5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123617600|sp|Q3Z3M7|SYS_SHISS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123755624|sp|Q323L0|SYS_SHIBS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166221437|sp|A1A9D6|SYS_ECOK1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166987311|sp|A7ZJW2|SYS_ECO24 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166987312|sp|A7ZYJ7|SYS_ECOHS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083568|sp|B1IWN0|SYS_ECOLC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226701391|sp|B7MHK5|SYS_ECO45 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226701392|sp|B7NM82|SYS_ECO7I RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226701393|sp|B7M821|SYS_ECO8A RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226701394|sp|B7NAP4|SYS_ECOLU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226701395|sp|B1LJX0|SYS_ECOSM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|229559900|sp|B1X833|SYS_ECODH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238065099|sp|B5YT28|SYS_ECO5E RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238065100|sp|B6I8W4|SYS_ECOSE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783025|sp|B7UMY4|SYS_ECO27 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783026|sp|B7LD85|SYS_ECO55 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783027|sp|B7MRV6|SYS_ECO81 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|259511667|sp|C4ZQ19|SYS_ECOBW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|26107319|gb|AAN79502.1|AE016758_106 Seryl-tRNA synthetase [Escherichia coli CFT073] gi|42950|emb|CAA28673.1| unnamed protein product [Escherichia coli] gi|1651420|dbj|BAA35625.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli str. K12 substr. W3110] gi|1787120|gb|AAC73979.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli str. K-12 substr. MG1655] gi|13360437|dbj|BAB34401.1| serine tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|24051120|gb|AAN42485.1| serine tRNA synthetase [Shigella flexneri 2a str. 301] gi|30040626|gb|AAP16357.1| serine tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|73854928|gb|AAZ87635.1| serine tRNA synthetase [Shigella sonnei Ss046] gi|81244790|gb|ABB65498.1| serine tRNA synthetase [Shigella boydii Sb227] gi|91071512|gb|ABE06393.1| seryl-tRNA synthetase [Escherichia coli UTI89] gi|110342685|gb|ABG68922.1| seryl-tRNA synthetase [Escherichia coli 536] gi|110614442|gb|ABF03109.1| serine tRNA synthetase [Shigella flexneri 5 str. 8401] gi|115512201|gb|ABJ00276.1| seryl-tRNA synthetase [Escherichia coli APEC O1] gi|157066096|gb|ABV05351.1| seryl-tRNA synthetase [Escherichia coli HS] gi|157079586|gb|ABV19294.1| seryl-tRNA synthetase [Escherichia coli E24377A] gi|169755633|gb|ACA78332.1| seryl-tRNA synthetase [Escherichia coli ATCC 8739] gi|169888386|gb|ACB02093.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli str. K-12 substr. DH10B] gi|170520733|gb|ACB18911.1| seryl-tRNA synthetase [Escherichia coli SMS-3-5] gi|187768390|gb|EDU32234.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188013954|gb|EDU52076.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|188487807|gb|EDU62910.1| seryl-tRNA synthetase [Escherichia coli 53638] gi|188998912|gb|EDU67898.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189355936|gb|EDU74355.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|189361156|gb|EDU79575.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|189366796|gb|EDU85212.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|189372720|gb|EDU91136.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|189376450|gb|EDU94866.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|190902375|gb|EDV62113.1| seryl-tRNA synthetase [Escherichia coli B7A] gi|190907660|gb|EDV67255.1| seryl-tRNA synthetase [Escherichia coli F11] gi|192927731|gb|EDV82346.1| seryl-tRNA synthetase [Escherichia coli E22] gi|194413610|gb|EDX29891.1| seryl-tRNA synthetase [Escherichia coli B171] gi|194422338|gb|EDX38338.1| seryl-tRNA synthetase [Escherichia coli 101-1] gi|208728790|gb|EDZ78391.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208732184|gb|EDZ80872.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208737518|gb|EDZ85201.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209157996|gb|ACI35429.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|209775018|gb|ACI85821.1| serine tRNA synthetase [Escherichia coli] gi|209775020|gb|ACI85822.1| serine tRNA synthetase [Escherichia coli] gi|209775022|gb|ACI85823.1| serine tRNA synthetase [Escherichia coli] gi|209775024|gb|ACI85824.1| serine tRNA synthetase [Escherichia coli] gi|209775026|gb|ACI85825.1| serine tRNA synthetase [Escherichia coli] gi|209911401|dbj|BAG76475.1| seryl-tRNA synthase [Escherichia coli SE11] gi|215264095|emb|CAS08437.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli O127:H6 str. E2348/69] gi|217322618|gb|EEC31042.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|218351098|emb|CAU96802.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli 55989] gi|218360247|emb|CAQ97797.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli IAI1] gi|218364570|emb|CAR02256.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli S88] gi|218370575|emb|CAR18382.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli IAI39] gi|218426245|emb|CAR07070.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli ED1a] gi|218431419|emb|CAR12297.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli UMN026] gi|222032627|emb|CAP75366.1| Seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli LF82] gi|226898327|gb|EEH84586.1| seryl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|227838892|gb|EEJ49358.1| seryl-tRNA synthetase [Escherichia coli 83972] gi|238863546|gb|ACR65544.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli BW2952] gi|242376708|emb|CAQ31421.1| seryl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253325122|gb|ACT29724.1| seryl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972908|gb|ACT38579.1| seryl-tRNA synthetase [Escherichia coli B str. REL606] gi|253977122|gb|ACT42792.1| seryl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|254591493|gb|ACT70854.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli O157:H7 str. TW14359] gi|257752833|dbj|BAI24335.1| seryl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|257758290|dbj|BAI29787.1| seryl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|257763421|dbj|BAI34916.1| seryl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|260449961|gb|ACX40383.1| seryl-tRNA synthetase [Escherichia coli DH1] gi|281178027|dbj|BAI54357.1| seryl-tRNA synthetase [Escherichia coli SE15] gi|281600221|gb|ADA73205.1| Seryl-tRNA synthetase [Shigella flexneri 2002017] gi|284920746|emb|CBG33809.1| seryl-tRNA synthetase [Escherichia coli 042] gi|290761769|gb|ADD55730.1| Seryl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|291324009|gb|EFE63431.1| seryl-tRNA synthetase [Escherichia coli B088] gi|291428786|gb|EFF01811.1| seryl-tRNA synthetase [Escherichia coli FVEC1412] gi|291434233|gb|EFF07206.1| seryl-tRNA synthetase [Escherichia coli B185] gi|291469739|gb|EFF12223.1| seryl-tRNA synthetase [Escherichia coli B354] gi|294493263|gb|ADE92019.1| seryl-tRNA synthetase [Escherichia coli IHE3034] gi|298279679|gb|EFI21187.1| seryl-tRNA synthetase [Escherichia coli FVEC1302] gi|299880384|gb|EFI88595.1| seryl-tRNA synthetase [Escherichia coli MS 196-1] gi|300300277|gb|EFJ56662.1| seryl-tRNA synthetase [Escherichia coli MS 185-1] gi|300306960|gb|EFJ61480.1| seryl-tRNA synthetase [Escherichia coli MS 200-1] gi|300318327|gb|EFJ68111.1| seryl-tRNA synthetase [Escherichia coli MS 175-1] gi|300359649|gb|EFJ75519.1| seryl-tRNA synthetase [Escherichia coli MS 198-1] gi|300397340|gb|EFJ80878.1| seryl-tRNA synthetase [Escherichia coli MS 69-1] gi|300405011|gb|EFJ88549.1| seryl-tRNA synthetase [Escherichia coli MS 84-1] gi|300409622|gb|EFJ93160.1| seryl-tRNA synthetase [Escherichia coli MS 45-1] gi|300411924|gb|EFJ95234.1| seryl-tRNA synthetase [Escherichia coli MS 115-1] gi|300417448|gb|EFK00759.1| seryl-tRNA synthetase [Escherichia coli MS 182-1] gi|300450861|gb|EFK14481.1| seryl-tRNA synthetase [Escherichia coli MS 116-1] gi|300457343|gb|EFK20836.1| seryl-tRNA synthetase [Escherichia coli MS 21-1] gi|300462474|gb|EFK25967.1| seryl-tRNA synthetase [Escherichia coli MS 187-1] gi|300523832|gb|EFK44901.1| seryl-tRNA synthetase [Escherichia coli MS 119-7] gi|300530357|gb|EFK51419.1| seryl-tRNA synthetase [Escherichia coli MS 107-1] gi|300842339|gb|EFK70099.1| seryl-tRNA synthetase [Escherichia coli MS 124-1] gi|300847427|gb|EFK75187.1| seryl-tRNA synthetase [Escherichia coli MS 78-1] gi|301075441|gb|EFK90247.1| seryl-tRNA synthetase [Escherichia coli MS 146-1] gi|305853414|gb|EFM53853.1| seryl-tRNA synthetase [Escherichia coli NC101] gi|306908275|gb|EFN38774.1| seryl-tRNA synthetase [Escherichia coli W] gi|307552735|gb|ADN45510.1| serine tRNA synthetase [Escherichia coli ABU 83972] gi|307627677|gb|ADN71981.1| seryl-tRNA synthetase [Escherichia coli UM146] gi|308120948|gb|EFO58210.1| seryl-tRNA synthetase [Escherichia coli MS 145-7] gi|309701169|emb|CBJ00469.1| seryl-tRNA synthetase [Escherichia coli ETEC H10407] gi|310336781|gb|EFQ01948.1| seryl-tRNA synthetase [Escherichia coli 1827-70] gi|312286441|gb|EFR14354.1| seryl-tRNA synthetase [Escherichia coli 2362-75] gi|312945416|gb|ADR26243.1| seryl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|313650195|gb|EFS14607.1| seryl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|315060178|gb|ADT74505.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Escherichia coli W] gi|315135541|dbj|BAJ42700.1| seryl-tRNA synthetase [Escherichia coli DH1] gi|315257933|gb|EFU37901.1| seryl-tRNA synthetase [Escherichia coli MS 85-1] gi|315287520|gb|EFU46931.1| seryl-tRNA synthetase [Escherichia coli MS 110-3] gi|315291252|gb|EFU50612.1| seryl-tRNA synthetase [Escherichia coli MS 153-1] gi|315296139|gb|EFU55448.1| seryl-tRNA synthetase [Escherichia coli MS 16-3] gi|315619205|gb|EFU99784.1| seryl-tRNA synthetase [Escherichia coli 3431] gi|320180610|gb|EFW55539.1| Seryl-tRNA synthetase [Shigella boydii ATCC 9905] gi|320183168|gb|EFW58026.1| Seryl-tRNA synthetase [Shigella flexneri CDC 796-83] gi|320192620|gb|EFW67261.1| Seryl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212] gi|320196611|gb|EFW71234.1| Seryl-tRNA synthetase [Escherichia coli WV_060327] gi|320202288|gb|EFW76859.1| Seryl-tRNA synthetase [Escherichia coli EC4100B] gi|320637763|gb|EFX07555.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. G5101] gi|320642887|gb|EFX12088.1| seryl-tRNA synthetase [Escherichia coli O157:H- str. 493-89] gi|320648344|gb|EFX16999.1| seryl-tRNA synthetase [Escherichia coli O157:H- str. H 2687] gi|320654182|gb|EFX22250.1| seryl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659806|gb|EFX27362.1| seryl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|320664275|gb|EFX31426.1| seryl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61] gi|323157221|gb|EFZ43344.1| seryl-tRNA synthetase [Escherichia coli EPECa14] gi|323159518|gb|EFZ45498.1| seryl-tRNA synthetase [Escherichia coli E128010] gi|323165354|gb|EFZ51141.1| seryl-tRNA synthetase [Shigella sonnei 53G] gi|323172135|gb|EFZ57773.1| seryl-tRNA synthetase [Escherichia coli LT-68] gi|323175485|gb|EFZ61080.1| seryl-tRNA synthetase [Escherichia coli 1180] gi|323185142|gb|EFZ70507.1| seryl-tRNA synthetase [Escherichia coli 1357] gi|323190715|gb|EFZ75984.1| seryl-tRNA synthetase [Escherichia coli RN587/1] gi|323379265|gb|ADX51533.1| seryl-tRNA synthetase [Escherichia coli KO11] gi|323937999|gb|EGB34261.1| seryl-tRNA synthetase [Escherichia coli E1520] gi|323942809|gb|EGB38974.1| seryl-tRNA synthetase [Escherichia coli E482] gi|323947318|gb|EGB43326.1| seryl-tRNA synthetase [Escherichia coli H120] gi|323953397|gb|EGB49263.1| seryl-tRNA synthetase [Escherichia coli H252] gi|323958200|gb|EGB53909.1| seryl-tRNA synthetase [Escherichia coli H263] gi|323962941|gb|EGB58514.1| seryl-tRNA synthetase [Escherichia coli H489] gi|323967140|gb|EGB62564.1| seryl-tRNA synthetase [Escherichia coli M863] gi|323969605|gb|EGB64892.1| seryl-tRNA synthetase [Escherichia coli TA007] gi|323976720|gb|EGB71808.1| seryl-tRNA synthetase [Escherichia coli TW10509] gi|324009812|gb|EGB79031.1| seryl-tRNA synthetase [Escherichia coli MS 57-2] gi|324012983|gb|EGB82202.1| seryl-tRNA synthetase [Escherichia coli MS 60-1] gi|324116106|gb|EGC10030.1| seryl-tRNA synthetase [Escherichia coli E1167] gi|326338211|gb|EGD62040.1| Seryl-tRNA synthetase [Escherichia coli O157:H7 str. 1125] gi|326346188|gb|EGD69926.1| Seryl-tRNA synthetase [Escherichia coli O157:H7 str. 1044] gi|327253681|gb|EGE65310.1| seryl-tRNA synthetase [Escherichia coli STEC_7v] gi|330910675|gb|EGH39185.1| seryl-tRNA synthetase [Escherichia coli AA86] gi|331038212|gb|EGI10432.1| serine--tRNA ligase [Escherichia coli H736] gi|331044912|gb|EGI17039.1| serine--tRNA ligase [Escherichia coli M605] gi|331050190|gb|EGI22248.1| serine--tRNA ligase [Escherichia coli M718] gi|331055213|gb|EGI27222.1| serine--tRNA ligase [Escherichia coli TA206] gi|331060730|gb|EGI32694.1| serine--tRNA ligase [Escherichia coli TA143] gi|331065623|gb|EGI37516.1| serine--tRNA ligase [Escherichia coli TA271] gi|331070340|gb|EGI41705.1| serine--tRNA ligase [Escherichia coli TA280] gi|331075369|gb|EGI46667.1| serine--tRNA ligase [Escherichia coli H591] gi|331080033|gb|EGI51212.1| serine--tRNA ligase [Escherichia coli H299] gi|332097143|gb|EGJ02126.1| seryl-tRNA synthetase [Shigella boydii 3594-74] gi|332104556|gb|EGJ07902.1| seryl-tRNA synthetase [Shigella sp. D9] gi|332342282|gb|AEE55616.1| seryl-tRNA synthetase SerS [Escherichia coli UMNK88] gi|332760582|gb|EGJ90871.1| seryl-tRNA synthetase [Shigella flexneri 2747-71] gi|332762948|gb|EGJ93198.1| seryl-tRNA synthetase [Shigella flexneri K-671] gi|332768071|gb|EGJ98257.1| seryl-tRNA synthetase [Shigella flexneri 2930-71] gi|333006696|gb|EGK26195.1| seryl-tRNA synthetase [Shigella flexneri VA-6] gi|333021000|gb|EGK40258.1| seryl-tRNA synthetase [Shigella flexneri K-304] Length = 430 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 270/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|311280197|ref|YP_003942428.1| seryl-tRNA synthetase [Enterobacter cloacae SCF1] gi|308749392|gb|ADO49144.1| seryl-tRNA synthetase [Enterobacter cloacae SCF1] Length = 430 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 273/431 (63%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDQAKAELDVLQAEIRDIALAIPNIPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G R+H +GE +DF A KL+G+RF V+ G +AHL RAL Q Sbjct: 119 DNVEVKRWGTPREFDFDVRDHVTLGEMHAGLDFAAAVKLTGSRFVVMKGQIAHLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI++ LP++ T +P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEILDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M S AE++L+ L L YR V+LCTGD+GF ACKT+DLEVW+ QN YREISS Sbjct: 299 EDSMDALEEMTSHAEKVLELLGLPYRRVALCTGDMGFGACKTFDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + IP V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIAIPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMKGLEFI 429 >gi|15800756|ref|NP_286770.1| seryl-tRNA synthetase [Escherichia coli O157:H7 EDL933] gi|12514055|gb|AAG55380.1|AE005278_6 serine tRNA synthetase; also charges selenocystein tRNA with serine [Escherichia coli O157:H7 str. EDL933] Length = 430 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 200/431 (46%), Positives = 271/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV +A+YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDALYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|260597297|ref|YP_003209868.1| seryl-tRNA synthetase [Cronobacter turicensis z3032] gi|260216474|emb|CBA29619.1| Seryl-tRNA synthetase [Cronobacter turicensis z3032] Length = 430 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 202/431 (46%), Positives = 273/431 (63%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + +++L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRTEPDAVAEKLARRGFKLDVDKLVALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + +PN+P ++VP+G + Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDTAKNELDALLAEIRDIALTLPNLPDDDVPLGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G R+H +GE LG MDF A KL+G+RF V+ G +A L RAL Q Sbjct: 119 ENVEVSRWGTPRKFDFEIRDHVTLGETLGGMDFASAVKLTGSRFVVMKGQIARLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT EHGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEEHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ ++LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEETLPVKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR V LC+GD+GF A KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMQALEEMTGHAEKVLQLLGLPYRKVLLCSGDMGFGARKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A+LENY ADG + IP V Sbjct: 359 CSNMWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEIPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMKGLEFI 429 >gi|332091134|gb|EGI96224.1| seryl-tRNA synthetase [Shigella dysenteriae 155-74] Length = 430 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKPDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|103486215|ref|YP_615776.1| seryl-tRNA synthetase [Sphingopyxis alaskensis RB2256] gi|123253474|sp|Q1GV79|SYS_SPHAL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|98976292|gb|ABF52443.1| seryl-tRNA synthetase [Sphingopyxis alaskensis RB2256] Length = 426 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 229/425 (53%), Positives = 281/425 (66%), Gaps = 1/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP D L +R L P S IL+ D + R L I+ ARRN S IGQ Sbjct: 1 MHDIRLIRDNPHAFDAGLARRGLAPLSAEILAADAELRALQTDIQAALARRNEASKLIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A G+ +ALK E + LK LP E+ E ++L ++ +PN+P ++VP G Sbjct: 61 AMAAGDKDKAEALKAEVAALKAALPAREEAERAQLAALHDRLAALPNLPADDVPDGEDEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ + G S EH + ALG +DF+ A K+SGARF+ L G +A LERALGQ Sbjct: 121 GNVELSRWGTPRSFDFTPLEHADFAPALG-LDFETAAKMSGARFAFLKGPMARLERALGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D T E GYTE + PLLVRD+A +GT Q+PKF +D+F TTDG WLI TSE+SLTN Sbjct: 180 FMLDRQTIEAGYTECATPLLVRDDAAFGTTQLPKFREDLFQTTDGLWLISTSEMSLTNAV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +I+ LP+R T L P FRSEAGSAGRDTRG +RQHQFWK ELVSITR EDS E E Sbjct: 240 REQILAEADLPIRMTALTPCFRSEAGSAGRDTRGYIRQHQFWKVELVSITRPEDSDAELE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 R AE IL+ L+L YR + LC GD+GF+A KTYDLEVWL GQN YREISSCS CG+FQ Sbjct: 300 RKTRAAESILEALELPYRKMLLCAGDMGFAARKTYDLEVWLPGQNAYREISSCSNCGDFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R K +F HTLNGSG+AVGR L+AILENY ADGSV IP L PYM + Sbjct: 360 ARRMNARFRREGGKGNEFVHTLNGSGLAVGRTLVAILENYQQADGSVDIPAALLPYMGGI 419 Query: 421 AVIKK 425 + Sbjct: 420 TRLTP 424 >gi|156934612|ref|YP_001438528.1| seryl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894] gi|166221438|sp|A7MER7|SYS_ENTS8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|156532866|gb|ABU77692.1| hypothetical protein ESA_02446 [Cronobacter sakazakii ATCC BAA-894] Length = 430 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 202/431 (46%), Positives = 273/431 (63%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + +++L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRTEPDAVAEKLARRGFKLDVDKLVALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + +PN+P +EVP+G + Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKNELDALLAEIRDIALTLPNLPDDEVPLGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G R+H +GE LG +DF A KL+G+RF V+ G +A L RAL Q Sbjct: 119 ENVEVSRWGTPRKFDFEIRDHVTLGETLGGLDFASAVKLTGSRFVVMKGQIARLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT EHGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEEHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ +SLP++ T P FRSEAGS GRDTRG++R HQF K E+V + R Sbjct: 239 EVPLTNLVRDEIIDEESLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQVVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR V LC+GD+GF A KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMQALEEMTGHAEKVLQLLGLPYRKVLLCSGDMGFGARKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A+LENY ADG + IP V Sbjct: 359 CSNMWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEIPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMKGLEFI 429 >gi|206577361|ref|YP_002239454.1| seryl-tRNA synthetase [Klebsiella pneumoniae 342] gi|238065104|sp|B5XY99|SYS_KLEP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|206566419|gb|ACI08195.1| seryl-tRNA synthetase [Klebsiella pneumoniae 342] Length = 430 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 202/431 (46%), Positives = 272/431 (63%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L EQL + E + + ++ + IPN+P ++VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEQLDAAKSELETLLAEIRDIALAIPNIPHDDVPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE G +DF A KL+G+RF V+ G LA L RAL Q Sbjct: 119 DNVEVSRWGTPRQFDFEVRDHVTLGEMHGGLDFAAAVKLTGSRFVVMKGQLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR V+LCTGD+GFSACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMVALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + IP + Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVALMENYQQADGRIEIPEI 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMRGLEYI 429 >gi|222148967|ref|YP_002549924.1| seryl-tRNA synthetase [Agrobacterium vitis S4] gi|254782999|sp|B9JXD8|SYS_AGRVS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|221735953|gb|ACM36916.1| seryl-tRNA synthetase [Agrobacterium vitis S4] Length = 427 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 275/425 (64%), Positives = 346/425 (81%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR EP S+ +++LDE+ R +++ ++D+++RRNS S +IG Sbjct: 1 MLDIKWIRENPELLDQALAKRGAEPLSQSLIALDEQRRAVVQDMQDMQSRRNSASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ +++L + LK E ++LK+ LP E++E + + L +S IPN+PL++VP+G + Sbjct: 61 AMAQKDMALAEKLKAEVASLKDTLPAAEEDERRLSAELTDALSRIPNIPLDDVPVGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++ R VG+KP H + EH EIGEALG MDFDRA KLSGARF+VLTG LA LERALGQ Sbjct: 121 DNVVARVVGQKPGWNHTAIEHPEIGEALGYMDFDRAAKLSGARFTVLTGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMIDLHTSEHGYTEVS+PL+VRDEAMYGTGQ+PKF++++F TTDGRWLIPT+EV+LTNL Sbjct: 181 FMIDLHTSEHGYTEVSSPLMVRDEAMYGTGQLPKFSEELFKTTDGRWLIPTAEVTLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S EI++ + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT + + EHE Sbjct: 241 SGEILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAQSALAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LH+R ++LCTGD+GF A KTYDLEVWL GQN +REISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHFRTMTLCTGDMGFGAAKTYDLEVWLPGQNTFREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR+ + K F HTLNGSG AVGRCLIA++ENYLN DGS+T+P VL PYM L Sbjct: 361 GRRMNARYRNKDGKGTTFVHTLNGSGTAVGRCLIAVMENYLNEDGSITVPDVLLPYMGGL 420 Query: 421 AVIKK 425 I+K Sbjct: 421 TRIEK 425 >gi|294011256|ref|YP_003544716.1| seryl-tRNA synthetase [Sphingobium japonicum UT26S] gi|292674586|dbj|BAI96104.1| seryl-tRNA synthetase [Sphingobium japonicum UT26S] Length = 425 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 226/424 (53%), Positives = 302/424 (71%), Gaps = 1/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+++R+NP D L +R LEP S +L+LDE++R + ++ +ARRN S IGQ Sbjct: 1 MHDIRFLRENPAAFDAGLARRGLEPLSAELLALDERSRAIKTALQQGQARRNEASKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ +++ +ALK E + LKE+LP LE E+ E+ +L ++ IPN+P ++VP G Sbjct: 61 AMAQKDMATAEALKAEVAALKEKLPALEAEDREIGEALAARLAAIPNLPADDVPPGEDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ S ++H + G ALG +DF+ LSGARF+ L G +A L RAL Q Sbjct: 121 QNVEVARWGEPRSFPFTPQDHADFGPALG-LDFEGGAALSGARFTALRGQMARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D + E+GY EV+ PLLV+DEA++GTGQ+PKFA+D+F TTDGRWLIPT+EVSLTNL Sbjct: 180 FMLDRQSRENGYEEVNPPLLVKDEALFGTGQLPKFAEDLFRTTDGRWLIPTAEVSLTNLV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +I+ ++SLPLR T L P FRSEAGSAGRDTRG +RQHQF K ELV+I + E+S EHE Sbjct: 240 REQIVPTESLPLRLTALTPCFRSEAGSAGRDTRGFIRQHQFEKVELVAICKPEESEAEHE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM + AE +L+ L L YR + LCTGD+GF A KT+DLEVWL Q YREISS S CG+FQ Sbjct: 300 RMCAAAEGVLQALGLPYRKMLLCTGDMGFGARKTWDLEVWLPSQQTYREISSVSNCGDFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RY+ K +F HTLNGSG+AVGR L+A+LENY DGSV +P VL PYM L Sbjct: 360 ARRMNARYKPEGEKQTRFLHTLNGSGLAVGRTLVAVLENYQQEDGSVIVPEVLAPYMGGL 419 Query: 421 AVIK 424 ++ Sbjct: 420 TRLR 423 >gi|288936304|ref|YP_003440363.1| seryl-tRNA synthetase [Klebsiella variicola At-22] gi|290510641|ref|ZP_06550011.1| seryl-tRNA synthetase [Klebsiella sp. 1_1_55] gi|288891013|gb|ADC59331.1| seryl-tRNA synthetase [Klebsiella variicola At-22] gi|289777357|gb|EFD85355.1| seryl-tRNA synthetase [Klebsiella sp. 1_1_55] Length = 430 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 202/431 (46%), Positives = 272/431 (63%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L EQL + E + + ++ + IPN+P ++VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEQLDAAKSELETLLAEIRDIALAIPNIPHDDVPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE G +DF A KL+G+RF V+ G LA L RAL Q Sbjct: 119 DNVEVSRWGTPRQFDFEVRDHVTLGEMHGGLDFAAAVKLTGSRFVVMKGQLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR V+LCTGD+GFSACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + IP + Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVALMENYQQADGRIEIPEI 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMRGLEYI 429 >gi|222085788|ref|YP_002544318.1| seryl-tRNA synthetase (serine-tRNA ligase) protein [Agrobacterium radiobacter K84] gi|254782998|sp|B9JEH1|SYS_AGRRK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|221723236|gb|ACM26392.1| seryl-tRNA synthetase (serine-tRNA ligase) protein [Agrobacterium radiobacter K84] Length = 427 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 272/425 (64%), Positives = 336/425 (79%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+N E LD AL KR EP S+ +++LDEK R +I+ ++D+++RRN+ S +IG Sbjct: 1 MLDIKWIRENAEVLDAALAKRGAEPLSQGLIALDEKRRSIIQSVQDMQSRRNAASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ N L + LK E + +K LP E+EE + + L +S IPN+PL++VP+G + Sbjct: 61 AMAQKNTELAEKLKGEVADIKTSLPAAEEEERVLTAELNDALSRIPNIPLDDVPVGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++ S G KP+ H +EH+EIGE LG MDF+RA KLSG+RF+VLT LA LERALGQ Sbjct: 121 DNVVKHSWGAKPAWNHKPKEHYEIGEELGYMDFERAAKLSGSRFTVLTSQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHTSEHGYTEVS+PL+VRDEAM+GTGQ+PKFA+D F TT G WLIPT+EV+LTNL Sbjct: 181 FMLDLHTSEHGYTEVSSPLMVRDEAMFGTGQLPKFAEDSFRTTGGHWLIPTAEVTLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S +I++ + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT E S EHE Sbjct: 241 SGDILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESSIAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LHYRV++L TGD+GF A KTYDLEVWL GQ+ YREISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHYRVMTLSTGDMGFGARKTYDLEVWLPGQDTYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + K KF HTLNGSG AVGRCLIA+LENYLN DGSVT+P L PYM L Sbjct: 361 ARRMNARYRGKDDKGTKFVHTLNGSGTAVGRCLIAVLENYLNDDGSVTVPDALLPYMGGL 420 Query: 421 AVIKK 425 I++ Sbjct: 421 KRIER 425 >gi|307294312|ref|ZP_07574156.1| seryl-tRNA synthetase [Sphingobium chlorophenolicum L-1] gi|306880463|gb|EFN11680.1| seryl-tRNA synthetase [Sphingobium chlorophenolicum L-1] Length = 425 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 223/426 (52%), Positives = 298/426 (69%), Gaps = 1/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+++R+NP D L +R LEP S +L+LDE++R + ++ +ARRN S IGQ Sbjct: 1 MHDIRFLRENPAAFDAGLARRGLEPLSAELLALDERSRAIKTALQQGQARRNEASKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ +++ +ALK E + LK+ +P LE E+ EV +L ++ +PN+P ++VP G Sbjct: 61 AMAQKDMATAEALKAEVAALKDSMPALEAEDREVGEALNARLAAVPNLPADDVPPGEDEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ S ++H + G ALG +DF+ LSGARF+ L G +A L RAL Q Sbjct: 121 QNVEVARWGEPRSFPFTPQDHADFGPALG-LDFEGGAALSGARFTALRGQMARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D + E+GY EV+ PLLV+D+A++GTGQ+PKFA+D+F TTDGRWLIPT+EVSLTNL Sbjct: 180 FMLDRQSGENGYEEVNPPLLVKDDALFGTGQLPKFAEDLFRTTDGRWLIPTAEVSLTNLV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I+ SLPLR T L P FRSEAGSAGRDTRG +RQHQF K ELV+I + E+S EHE Sbjct: 240 RERIVPVDSLPLRLTALTPCFRSEAGSAGRDTRGFIRQHQFEKVELVAICKPEESEAEHE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM + AE +L+ L L YR + LCTGD+GF A KT+DLEVWL Q YREISS S CG+FQ Sbjct: 300 RMCAAAEGVLQALGLPYRKMLLCTGDMGFGARKTWDLEVWLPSQQTYREISSVSNCGDFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RY+ K+ +F HTLNGSG+AVGR L+A+LENY DGSV +P VL PYM L Sbjct: 360 ARRMNARYKPEGEKNTRFLHTLNGSGLAVGRTLVAVLENYQQEDGSVIVPEVLAPYMGGL 419 Query: 421 AVIKKE 426 + Sbjct: 420 TRLSPR 425 >gi|23014252|ref|ZP_00054079.1| COG0172: Seryl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 422 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 227/420 (54%), Positives = 294/420 (70%), Gaps = 2/420 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ IR NPE D L +R LEP++ IL LD + R ++++ARRN S QIG Sbjct: 1 MHDLKSIRDNPEGFDAGLARRGLEPKAAAILDLDTRRRAAQTAFQEMQARRNEASKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G AL +E +++KE++P E+E+ + + ++ +++ IPN+P +VP G Sbjct: 61 LKKSGG--DASALMDEVASMKERMPASEEEDRLLGAEIEDILASIPNLPAADVPDGPDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + +H IG LGLMDFD A KLSGARF VL G LA L+RA+GQ Sbjct: 119 HNVEVRKWGAPKEFAFTALDHDAIGAKLGLMDFDGAAKLSGARFVVLKGQLARLQRAIGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DL T+EHGYTE+ PL+V+D A +GTGQ+PKF++D+F T G WLIPT+EV LTNL Sbjct: 179 FMLDLQTTEHGYTEMDPPLMVKDGAAFGTGQLPKFSEDLFKTNTGHWLIPTAEVPLTNLV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S EI++ KSLPLR T L P FRSEAGSAG+DTRGM+RQHQF K E+VSI + S EHE Sbjct: 239 SDEILDEKSLPLRMTALTPCFRSEAGSAGKDTRGMIRQHQFHKVEMVSIAHPDKSDEEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +L+RL L YRV+ LCTGD+GFS+ KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 299 RMTKCAETVLQRLGLAYRVIVLCTGDMGFSSRKTYDIEVWLPGQQRYREISSCSNCGDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +R+R K +F HTLNGSG+AVGR LIA++ENY DG++ +P VLRPYM L Sbjct: 359 ARRMKARFRPEGEKGTRFVHTLNGSGLAVGRTLIAVMENYQREDGTIEVPEVLRPYMGGL 418 >gi|323137658|ref|ZP_08072734.1| seryl-tRNA synthetase [Methylocystis sp. ATCC 49242] gi|322396955|gb|EFX99480.1| seryl-tRNA synthetase [Methylocystis sp. ATCC 49242] Length = 427 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 235/425 (55%), Positives = 293/425 (68%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR+N E D K+R LEP S +L+ D+ R I +++ + RRN+ S +IG Sbjct: 1 MYDIKWIRENAELFDNGRKRRGLEPLSAQLLAFDDARRAAIAQLQVAQERRNAASREIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ G+ + +ALK E + +KE P LE+ E + L ++ IPN PL+ VP G N Sbjct: 61 AMKAGDSAKAEALKAEVAQIKENWPALEEAERYAVAELDAALAAIPNTPLDAVPDGADEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ +EHFEIGE LGLMDF+ A KLSGARF V G LA LERAL Q Sbjct: 121 DNVEVSRWGEPRKFDFAPKEHFEIGEGLGLMDFETAAKLSGARFVVNKGPLARLERALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT HGY EV+ PLLVRD+AM+GT Q+PKF +D F DG WLIPT+EV LTNL Sbjct: 181 FMLDLHTGAHGYVEVNPPLLVRDDAMFGTAQLPKFREDQFAAGDGYWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I++ LP+R T FR+EAG+AG+DTRGM+RQHQF+K ELVSIT E S EHE Sbjct: 241 RESILDETQLPIRMTAGTYCFRAEAGAAGKDTRGMIRQHQFYKVELVSITTPEQSLEEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +L+ L L YR V LCTGD+GF++ KTYDLEVWL GQ YREISSCS CG+FQ Sbjct: 301 RMTGCAERVLQTLGLPYRKVVLCTGDMGFASQKTYDLEVWLPGQGKYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RYR SK +F HTLNGSGVAVGR ++A+LENY ADGSVTIP LRPYM + Sbjct: 361 ARRMGARYRPAESKGPRFVHTLNGSGVAVGRAMVAVLENYQEADGSVTIPQALRPYMGGM 420 Query: 421 AVIKK 425 I + Sbjct: 421 ERIAR 425 >gi|302336512|ref|YP_003801719.1| seryl-tRNA synthetase [Olsenella uli DSM 7084] gi|301320352|gb|ADK68839.1| seryl-tRNA synthetase [Olsenella uli DSM 7084] Length = 428 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 193/427 (45%), Positives = 280/427 (65%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R++P+ +D + R + E LDE+ R +I ++E ++A RN+ S Q+G Sbjct: 1 MLDIKFVREHPDAVDESCASRQNAHWDRERFFDLDEERRSVIVEVEKLQAERNAISKQVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + EG ++ K + S K ++ LE+ V L L+S IPN+P VP G Sbjct: 61 QLMREGKRDEAESAKAQVSANKSRIAGLEERRGVVEKELLDLLSAIPNIPDSSVPYGKDD 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N +R+ G+ + H+++G A G++DFDR KL+G+RF +L G A +ERAL Sbjct: 121 SDNPEVRAWGEPRRFGFDPKAHWDLGPATGMIDFDRGVKLAGSRFYLLGGMGARMERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 F ID+H G+ E P++ ++++GTGQ+PKF +D+F + G +LIPT+EV LTN+ Sbjct: 181 NFFIDMHV-RAGFKEWWPPVITNYDSLFGTGQLPKFDEDLFHVSGGMYLIPTAEVMLTNI 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E +++ LPL +T P FR EAGSAGRDTRG++R H+F K E+V + EDS ++ Sbjct: 240 HRDETLDASQLPLLYTAFTPCFREEAGSAGRDTRGIIRVHEFDKVEMVKFAKPEDSMSQL 299 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M++ AE LK L L Y VV+LCTGD+GFSACK YD+EVWL N Y+EISSCS CG+F Sbjct: 300 ESMVAEAELCLKTLGLPYHVVTLCTGDIGFSACKCYDIEVWLPSYNSYKEISSCSNCGDF 359 Query: 360 QSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RR N +YRDP+ K ++ HTLNGSG+AVGR + AI+EN NADGS+T+P L PYM Sbjct: 360 QARRANIKYRDPSEFKGARYVHTLNGSGLAVGRTMAAIMENCQNADGSITVPEALVPYMG 419 Query: 419 NLAVIKK 425 + VI+ Sbjct: 420 GVDVIRP 426 >gi|261339231|ref|ZP_05967089.1| hypothetical protein ENTCAN_05465 [Enterobacter cancerogenus ATCC 35316] gi|288319086|gb|EFC58024.1| serine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] Length = 430 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 272/431 (63%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDQAKAELDVLLAEIRDIALAIPNIPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G R+H +GE +DF A KL+G+RF V+ G +AHL RAL Q Sbjct: 119 DNVEVKRWGTPREFDFEVRDHVTLGEMHAGLDFAAAVKLTGSRFVVMKGQIAHLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T +P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR ++LCTGD+GF ACKT+DLEVW+ QN YREISS Sbjct: 299 EDSMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGACKTFDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R+ + K + HTLNGSG+AVGR L+A+LENY ADG + IP V Sbjct: 359 CSNVWDFQARRMQARCRNKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEIPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM I Sbjct: 419 LRPYMKGQQFI 429 >gi|302388768|ref|YP_003824589.1| seryl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] gi|302199396|gb|ADL06966.1| seryl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] Length = 426 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 196/428 (45%), Positives = 282/428 (65%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR NP+ + AL+KR + E L LDE+ R L+ ++E +++ RN S +I + Sbjct: 1 MLDIKMIRSNPDEVKRALEKRGTQANLEEFLKLDEERRNLLVEVEQLKSLRNRESEEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + D L + + +++ ++++ E+ L++++ IPN+P E VP+G S Sbjct: 61 RKKQGEPA--DDLIRQMREVSDRIKEMDEKVKEIEEKLEQILLMIPNIPDESVPVGESDA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + H+E+GEAL ++DF+RA+K++G+RF V G A LERAL Sbjct: 119 DNVEMRRWGEPRKFDFEPKPHWELGEALDILDFERASKITGSRFVVYKGAGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--CTTDGRWLIPTSEVSLTN 238 FM+DLH +HGY E+ P +V +M GTGQ+PKF ++ F +LIPT+EV +TN Sbjct: 179 FMLDLHIEKHGYKEIFPPFIVNRASMTGTGQLPKFEEEAFKLFNNTDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+++EI+E + LP+ + + FR+EAGSAGRDTRG++RQHQF K ELV T E S E Sbjct: 239 LHANEILEKEDLPIYYVAYSGCFRAEAGSAGRDTRGIIRQHQFNKVELVKFTEPEKSMEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AEE+L+ L L YRVV+LCTGDLGF++ KTYD+EVW+ N Y EISSCS + Sbjct: 299 LEKLTADAEEVLQLLGLPYRVVALCTGDLGFASSKTYDIEVWMPSYNRYVEISSCSNFKD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR N RYR ++ HTLNGSG+AVGR AILENY DGSV IP VLRPYM Sbjct: 359 YQARRANIRYRPEKGAKPQYVHTLNGSGLAVGRTTAAILENYQQPDGSVVIPEVLRPYMG 418 Query: 419 NLAVIKKE 426 + VI K+ Sbjct: 419 GMEVIAKK 426 >gi|144899900|emb|CAM76764.1| Seryl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 420 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 221/423 (52%), Positives = 294/423 (69%), Gaps = 4/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++WIR+NP+ D L +R L+P+S ++ LD + R ++++++A RN S QIG Sbjct: 1 MHDLKWIRENPDAFDAGLARRGLDPRSAALIRLDGERRAAQTRLQELQASRNETSKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G V A+ +E + LKE +P+LE +E + + +++ IPN+P +VP G Sbjct: 61 IKKQGG--DVSAIMDEIAKLKEDIPLLEAQEKSLSEEIDGILAAIPNLPGADVPDGPDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G+ + EH IG LGLMDFD A KLSGARF VL G LA LERAL Q Sbjct: 119 HNVEIRRWGQPGAFDFQPLEHDAIGAKLGLMDFDGAAKLSGARFVVLKGKLARLERALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+ T +HGYTE+S P LV+D A++GTGQ+PKF DD+F T G WLIPT+EV LTNL Sbjct: 179 FMLDVQTEQHGYTEISPPTLVKDGALFGTGQLPKFGDDLFKTNTGHWLIPTAEVPLTNLV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I++ +LP+R T L +RSEAG+AG+DTRGM+RQHQFWK E+VSI + S EH+ Sbjct: 239 GDSIVDEAALPIRMTALTLCYRSEAGAAGKDTRGMIRQHQFWKVEMVSIAHPDQSEAEHQ 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAE IL++L+L YR + LCTGD+GFS+ KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 299 RMTACAETILQKLELPYRTIVLCTGDMGFSSQKTYDIEVWLPGQGRYREISSCSNCGDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +R++ +F HTLNGSG+AVGR L+A+LENY ADGSV +P L+PYM L Sbjct: 359 ARRMKARFKGDKGN--RFVHTLNGSGLAVGRTLVAVLENYQQADGSVRVPEALKPYMGGL 416 Query: 421 AVI 423 VI Sbjct: 417 EVI 419 >gi|256830391|ref|YP_003159119.1| seryl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] gi|256579567|gb|ACU90703.1| seryl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] Length = 427 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 278/425 (65%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++IR NP+ + L+KR + E L++D+K R L+ ++ED++ARRN S ++ + Sbjct: 1 MLDIKFIRSNPDEVKDGLRKRRSKLDLEQFLAIDQKRRDLLLEVEDLKARRNQASGEMAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G DAL E + ++ L++E ++ + IPNVP VP G Sbjct: 61 MKKAG--ENADALLLELGGMSTRIKALDEELKDIDQQTADWVMSIPNVPHSSVPEGVDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +RS G+KP+ +EH+E+G AL +DF+ A K++G+RF +L G A +ERAL Sbjct: 119 DNREVRSWGEKPAMPFSPKEHWELGTALNGLDFETAAKITGSRFVILKGWAAKMERALIS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+D+ T ++GY EV P++V E++ GTGQ+PKF +D+F +LIPT+EV +TN+ Sbjct: 179 FMLDVQTMQNGYDEVMPPVIVNRESLMGTGQLPKFEEDLFHLENTNYYLIPTAEVPVTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y + +LP+ FRSEAGS G+DT+GM+RQHQF K ELV + S+ E Sbjct: 239 YRDTTLAQSALPIAHCAYTACFRSEAGSYGKDTKGMIRQHQFDKVELVRFVHPDTSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++L AE IL++L LHYRVV+LC GDLGFS+ KTYD+EVWL GQ+ YREISSCS +F Sbjct: 299 EKLLGHAESILQKLGLHYRVVTLCAGDLGFSSAKTYDIEVWLPGQDKYREISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R++ +SK + HTLNGSG+AVGR ++AILENY ADGSV +P VLRPYMN Sbjct: 359 QARRAGIRFKPTDSKKSRLVHTLNGSGLAVGRTMVAILENYQQADGSVIVPEVLRPYMNG 418 Query: 420 LAVIK 424 L I+ Sbjct: 419 LDKIE 423 >gi|262274498|ref|ZP_06052309.1| seryl-tRNA synthetase [Grimontia hollisae CIP 101886] gi|262221061|gb|EEY72375.1| seryl-tRNA synthetase [Grimontia hollisae CIP 101886] Length = 428 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 193/429 (44%), Positives = 265/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + + + +L+EK + L + E+++A RN+ S IGQ Sbjct: 1 MLDSKLLRTELDATAEKLARRGFKLDVDTLRNLEEKRKSLQVRTEELQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L L ++L + E E+ L +I +PN+ + VP+G Sbjct: 61 AKAKG--EDIQPLLAAVENLGDELDKAKAELAELQEQLNSIIMGVPNIADDSVPVGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ I G+ + ++H ++GE G +DF A KLSG+RF V+ G +A L RA+ Q Sbjct: 119 ENVEISVWGEPKTYDFEVKDHVDLGELTGGLDFASAVKLSGSRFIVMKGQMARLHRAIAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE+ P LV ++++GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTKPATEEGVGMSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTN+ I+E LP+R T P FRSEAGS GRDTRG++R HQF K ELV I + ED Sbjct: 239 PLTNMVRDTIVEEADLPIRMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L L YR V LCTGD+GF + KTYDLEVW+ Q YREISSCS Sbjct: 299 SMAALEELTGHAEKVLQLLKLPYRKVILCTGDMGFGSAKTYDLEVWVPAQGTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILENY ADG + +P VLR Sbjct: 359 NMTDFQARRMQARFRRKGEKKPELLHTLNGSGLAVGRTMVAILENYQLADGRIEVPEVLR 418 Query: 415 PYMNNLAVI 423 PYM L I Sbjct: 419 PYMGGLTHI 427 >gi|295096401|emb|CBK85491.1| seryl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 430 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 271/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDQAKAELDVLQAEIRDIALAIPNIPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G R+H +GE +DF A KL+G+RF V+ G +AHL RAL Q Sbjct: 119 DNVEVKRWGTPREFDFEVRDHVTLGEMHAGLDFAAAVKLTGSRFVVMKGQIAHLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T +P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S E M AE++L+ L L YR ++LCTGD+GF ACKT+DLEVW+ QN YREISS Sbjct: 299 EESMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGACKTFDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A+LENY ADG + IP V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEIPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM I Sbjct: 419 LRPYMKGQQFI 429 >gi|209549091|ref|YP_002281008.1| seryl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238065105|sp|B5ZMG0|SYS_RHILW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|209534847|gb|ACI54782.1| seryl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 427 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 269/425 (63%), Positives = 339/425 (79%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR EP ++ +++LDEK R ++K +D+ +RRN S +IG Sbjct: 1 MLDIKWIRENPEALDAALAKRGAEPLAQNLVALDEKRRSAVQKAQDLLSRRNLASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+++ N L + LK E + LK LP +E+E+ ++ + L +S IPN+P ++VP+G + Sbjct: 61 ALSQKNGELAEKLKVEVAELKAMLPAVEEEDRQLTAELNDALSRIPNIPFDDVPVGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++ R+VG+KP H +EHFEIGEALG MDF+RA KLSG+RF+VLTG LA LERALGQ Sbjct: 121 DNVVTRTVGEKPRWNHTPKEHFEIGEALGYMDFERAAKLSGSRFTVLTGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMIDLHT EHGYTEVS+PL+VR EA++GTG +PKF +D+F TTDGR+LIPT+EV+LTNL Sbjct: 181 FMIDLHTREHGYTEVSSPLMVRAEALFGTGNLPKFEEDLFKTTDGRYLIPTAEVTLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT E + EHE Sbjct: 241 REEILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESAVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAE++LKRL LH+R ++LCTGD+GF + KTYDLEVWL GQN +REISSCS CG+FQ Sbjct: 301 RMTACAEDVLKRLGLHFRTMTLCTGDMGFGSRKTYDLEVWLPGQNAFREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + KS +F HTLNGSG AVGRCLIA+LENYLN DGSVTIP VL PYM L Sbjct: 361 ARRMNARYRGKDDKSNRFVHTLNGSGTAVGRCLIAVLENYLNEDGSVTIPDVLLPYMGGL 420 Query: 421 AVIKK 425 I++ Sbjct: 421 TKIER 425 >gi|294789503|ref|ZP_06754739.1| serine--tRNA ligase [Simonsiella muelleri ATCC 29453] gi|294482583|gb|EFG30274.1| serine--tRNA ligase [Simonsiella muelleri ATCC 29453] Length = 430 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 201/432 (46%), Positives = 285/432 (65%), Gaps = 9/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + E + L R E + LD + ++L + E ++A+RN S QIG Sbjct: 1 MLDIQLLRNDIEAVAQRLAARGFELDTTKFEQLDAQRKLLQTENEQLQAKRNQLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +G DA KNE + +K Q+ +E++ + ++L L+ +PN+P E VPIG Sbjct: 61 FMGQGKKDEADAAKNEVAQIKSQMDKIEQDLPNIQAALDDLLLRVPNLPHESVPIGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++G ALG +DF++A +LSGARFS++ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPRQFDFDIKDHVDLGAALG-LDFEKAAQLSGARFSLMKGKVARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT++HGYTE P +V D + GTGQ+PKF +D+F T ++LIPT+E Sbjct: 180 FMLDTHTTQHGYTECYTPYIVSDSTLLGTGQLPKFGEDLFHVTRGGDETKLTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN E++ LP++ T +P FRSEAGS G+DTRG++RQHQF K E+V I + E Sbjct: 240 VTLTNTVRDEVLSPHDLPMKLTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVEMVQIVQPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKLLELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRALVAVLENHQNADGSINIPKAL 418 Query: 414 RPYMNNLAVIKK 425 +PY+ + ++ Sbjct: 419 QPYLGGVEKLEP 430 >gi|194435163|ref|ZP_03067396.1| seryl-tRNA synthetase [Shigella dysenteriae 1012] gi|194416601|gb|EDX32737.1| seryl-tRNA synthetase [Shigella dysenteriae 1012] Length = 430 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQMPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKPDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|254780680|ref|YP_003065093.1| seryl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] gi|254040357|gb|ACT57153.1| seryl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 430 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 430/430 (100%), Positives = 430/430 (100%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ Sbjct: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN Sbjct: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ Sbjct: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY Sbjct: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE Sbjct: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ Sbjct: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL Sbjct: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 Query: 421 AVIKKEHILE 430 AVIKKEHILE Sbjct: 421 AVIKKEHILE 430 >gi|332759807|gb|EGJ90110.1| seryl-tRNA synthetase [Shigella flexneri 4343-70] Length = 430 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDTLQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMIAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|324019016|gb|EGB88235.1| seryl-tRNA synthetase [Escherichia coli MS 117-3] Length = 430 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLRGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|332088847|gb|EGI93959.1| seryl-tRNA synthetase [Shigella boydii 5216-82] Length = 430 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTCLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|83952360|ref|ZP_00961091.1| seryl-tRNA synthetase [Roseovarius nubinhibens ISM] gi|83836033|gb|EAP75331.1| seryl-tRNA synthetase [Roseovarius nubinhibens ISM] Length = 430 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 206/429 (48%), Positives = 280/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP D AL R L+ S IL+LDEK R LI E +A +N S ++G Sbjct: 1 MHDIRAIRDNPAAFDAALALRGLDGASSQILALDEKRRALIHAAETAQAEQNRASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ K ++ ++ E E+ L L+ +PN+P ++VP G Sbjct: 61 AKAKGDEAEFERLRALVGEKKSEVAAMQAEAKELDQQLTDLLMGLPNLPFDDVPQGADEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G +EH+E+ L MDF+ A KLSG+RF VL+G +A + RAL Q Sbjct: 121 DNVEIHRWGTPRVFDFTPKEHYELDGVLPGMDFETAAKLSGSRFVVLSGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMI+ H E+G TE P+LVR E MYGTGQ+PKF +D + TT+G WL+PT+EV+LTN+ Sbjct: 181 FMINTHIDENGLTETWTPVLVRPEMMYGTGQLPKFGEDSYETTNGWWLVPTAEVTLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +E+ LP R+ FRSEAGSAGRDT GMLRQHQF K E+VS+T ++S E + Sbjct: 241 NGLTVEADYLPRRYVAHTQCFRSEAGSAGRDTAGMLRQHQFEKVEMVSVTHPDESRAELD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CA+ IL+RL L YR V LCTGD+GF A +T+D+EVWL GQ+ YREISS S CG+FQ Sbjct: 301 RMTACAQGILERLGLPYRTVVLCTGDMGFGARRTHDIEVWLPGQDSYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + +F HTLNGSG+AVGRCLIA+LEN ADGSV +P L PY+ Sbjct: 361 ARRMNARFKPADGGKPQFLHTLNGSGLAVGRCLIAVLENGQQADGSVALPEALHPYLGGK 420 Query: 421 AVIKKEHIL 429 ++ + L Sbjct: 421 TILAADGTL 429 >gi|333006955|gb|EGK26450.1| seryl-tRNA synthetase [Shigella flexneri K-218] Length = 430 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMIAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|294101987|ref|YP_003553845.1| seryl-tRNA synthetase [Aminobacterium colombiense DSM 12261] gi|293616967|gb|ADE57121.1| seryl-tRNA synthetase [Aminobacterium colombiense DSM 12261] Length = 423 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 201/425 (47%), Positives = 283/425 (66%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR N E + L R+ + + I+ LDE+ R L+ + E+++A+RN S ++ + Sbjct: 1 MLEIKWIRNNIEEVKAFLVNRNNDFDVDRIVILDEEKRSLLTETENLKAQRNEGSRKVAE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + V L E L + + + + E+ L+ L+ +PN P + VP+G N Sbjct: 61 AKASGQDADV--LMEEMKNLGQMVKEKDSKIAEIDQELQSLLLQMPNRPHDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + + H++IGE LG++DF++ L+ +RF+VL G A LERAL Sbjct: 119 DNMEVRKWGTPKEFVFEPQAHWDIGEKLGILDFEKGVSLAESRFTVLKGAGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 FM+DLHT HGY E+ P +V + M GTGQ+PKFA+D++ C + WLIPT+EV LTNL Sbjct: 179 FMLDLHTEHHGYKEIQPPFMVSSQTMQGTGQLPKFAEDLYKCEGEDLWLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EI+ + LPL +T P FR EAGS GRD RGM+RQHQF K ELV I++ E+S+ E Sbjct: 239 HSGEILPEEVLPLYYTAYTPCFRKEAGSYGRDVRGMMRQHQFDKVELVKISKPENSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AEE+L++L L YRV++LCTGD+GF A KTYDLEVWL Q+ YREISSCS C +F Sbjct: 299 EKLTANAEEVLQKLGLPYRVITLCTGDMGFGASKTYDLEVWLPFQDKYREISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RRM +RY+ + ++ HTLNGSG+AVGR LIA+LENY DGSV IP L PYM Sbjct: 359 QARRMGTRYKPADGGRPRYVHTLNGSGIAVGRTLIAVLENYQREDGSVEIPEALVPYMGG 418 Query: 420 LAVIK 424 + I+ Sbjct: 419 MKEIR 423 >gi|190891515|ref|YP_001978057.1| seryl-tRNA synthetase [Rhizobium etli CIAT 652] gi|238692532|sp|B3PXU3|SYS_RHIE6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|190696794|gb|ACE90879.1| seryl-tRNA synthetase protein [Rhizobium etli CIAT 652] Length = 427 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 270/425 (63%), Positives = 339/425 (79%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR EPQ++ +++LDEK R ++K +D+ +RRN S +IG Sbjct: 1 MLDIKWIRENPEALDAALAKRGAEPQAQSLVALDEKRRSAVQKAQDMLSRRNLASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ N L + LK E + LK LP +E+E+ ++ + L +S IPN+P ++VP+G + Sbjct: 61 AMAQKNGELAEKLKAEVAELKTLLPAIEEEDRQLTAELNDALSRIPNIPFDDVPVGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++ R+VG+KP H +EHFEIGEALG MDF+RA KLSG+RF+VLTG LA LERALGQ Sbjct: 121 DNVVTRTVGEKPRWNHTPKEHFEIGEALGYMDFERAAKLSGSRFTVLTGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMIDLHT EHGYTEVS+PL+VR EA++GTG +PKF +D+F TTD R+LIPT+EV+LTNL Sbjct: 181 FMIDLHTREHGYTEVSSPLMVRAEALFGTGNLPKFEEDLFKTTDDRYLIPTAEVTLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT + + EHE Sbjct: 241 REEILEQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDADSAIAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LH+R ++LCTGD+GF + KTYDLEVWL GQN +REISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHFRTMTLCTGDMGFGSRKTYDLEVWLPGQNAFREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + K+ +F HTLNGSG AVGRCLIA+LENYLN DGSVTIP VL PYM L Sbjct: 361 ARRMNARYRGKDDKTNRFVHTLNGSGTAVGRCLIAVLENYLNEDGSVTIPDVLLPYMGGL 420 Query: 421 AVIKK 425 I++ Sbjct: 421 TKIER 425 >gi|327189128|gb|EGE56313.1| seryl-tRNA synthetase [Rhizobium etli CNPAF512] Length = 427 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 271/425 (63%), Positives = 339/425 (79%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR EP ++ +++LDEK R ++K +D+ +RRN S +IG Sbjct: 1 MLDIKWIRENPEALDAALAKRGAEPLAQSLVALDEKRRSAVQKAQDMLSRRNLASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ N L + LK E + LK LP +E+EE ++ + L +S IPN+P ++VP+G + Sbjct: 61 AMAQRNGELAEKLKAEVAELKTLLPAIEEEERQLTAELNDALSRIPNIPFDDVPVGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++ R+VG+KP H +EHFEIGEALG MDF+RA KLSG+RF+VLTG LA LERALGQ Sbjct: 121 DNVVTRTVGEKPRWNHTPKEHFEIGEALGYMDFERAAKLSGSRFTVLTGQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMIDLHT EHGYTEVS+PL+VR EA++GTG +PKF +D+F TTDGR+LIPT+EV+LTNL Sbjct: 181 FMIDLHTREHGYTEVSSPLMVRAEALFGTGNLPKFEEDLFKTTDGRYLIPTAEVTLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT E + EHE Sbjct: 241 REEILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESAIAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LH+R ++LCTGD+GF + KTYDLEVWL GQN +REISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHFRTMTLCTGDMGFGSRKTYDLEVWLPGQNAFREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + K+ +F HTLNGSG AVGRCLIA+LENYLN DGSVTIP VL PYM L Sbjct: 361 ARRMNARYRGKDDKTNRFVHTLNGSGTAVGRCLIAVLENYLNEDGSVTIPDVLLPYMGGL 420 Query: 421 AVIKK 425 I++ Sbjct: 421 TKIER 425 >gi|126461215|ref|YP_001042329.1| seryl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|126102879|gb|ABN75557.1| seryl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 430 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 217/430 (50%), Positives = 279/430 (64%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+ P+ D AL +R L S IL++DE R I E +A +N S ++G Sbjct: 1 MHDIRIIREFPDRFDTALSRRGLSALSGEILAIDEARRSKILAAETAQAEQNRASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ + K ++ L +E + L+ ++ IPN+PL+EVP G + Sbjct: 61 AKARGDEAEFERLRALVAEKKAEVARLNEEAAAEDARLRDMLVAIPNLPLDEVPEGPDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G +EHFEI MDF A KLSG+RF +L G + + RAL Q Sbjct: 121 ANVEIRRWGTPRGFNFAPKEHFEIAGVKPGMDFATAAKLSGSRFVMLKGAVIRVHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H +EHG TE P+LV+DEAM+GTGQ+PKF++D + TT+G WLIPTSEV+LTN Sbjct: 181 FMLDTHVTEHGLTETWTPVLVKDEAMFGTGQLPKFSEDSYQTTNGWWLIPTSEVTLTNTV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S EI++ LP+R T FRSEAGSAG+DT GMLRQHQF K E+VSIT E S EHE Sbjct: 241 SGEILDEAQLPVRMTAHTQCFRSEAGSAGKDTSGMLRQHQFEKVEMVSITTPETSLAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE IL++L L YR + LCTGD+GF A KT+DLEVWL GQN YREISS S CG+FQ Sbjct: 301 RMTGCAEAILQKLGLPYRTIVLCTGDMGFGATKTHDLEVWLPGQNTYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R +F HTLNGSG+AVGRCLIA+LEN DGSV +P L PY+ Sbjct: 361 ARRMNARFRPAGGGKPEFVHTLNGSGLAVGRCLIAVLENGQQEDGSVELPEALHPYLGGK 420 Query: 421 AVIKKEHILE 430 I + LE Sbjct: 421 TRISADGTLE 430 >gi|283833814|ref|ZP_06353555.1| serine--tRNA ligase [Citrobacter youngae ATCC 29220] gi|291070481|gb|EFE08590.1| serine--tRNA ligase [Citrobacter youngae ATCC 29220] Length = 430 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 271/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLASRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G +++L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIESLRLEVNKLGEELDAAKAELDTLQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHTGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ +LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDALPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMEALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEFI 429 >gi|332560222|ref|ZP_08414544.1| seryl-tRNA synthetase [Rhodobacter sphaeroides WS8N] gi|332277934|gb|EGJ23249.1| seryl-tRNA synthetase [Rhodobacter sphaeroides WS8N] Length = 430 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 216/430 (50%), Positives = 279/430 (64%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+ P+ D AL +R L S IL++DE R I E +A +N S ++G Sbjct: 1 MHDIRIIREFPDRFDTALSRRGLSALSGEILAIDEARRSKILAAETAQAEQNRASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ + K ++ L +E + L+ ++ IPN+PL+EVP G + Sbjct: 61 AKARGDEAEFERLRALVAEKKAEVARLNEEAAAEDARLRDMLVAIPNLPLDEVPEGPDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G +EHFEI MDF A KLSG+RF +L G + + RAL Q Sbjct: 121 ANVEIRRWGTPRGFNFAPKEHFEIAGVKPGMDFATAAKLSGSRFVMLKGAVIRVHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H +EHG TE P+LV+DEAM+GTGQ+PKF++D + TT+G WLIPTSEV+LTN Sbjct: 181 FMLDTHVTEHGLTETWTPVLVKDEAMFGTGQLPKFSEDSYQTTNGWWLIPTSEVTLTNSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ LP+R T FRSEAGSAG+DT GMLRQHQF K E+VSIT E S EHE Sbjct: 241 AGEILDEAQLPIRMTAHTQCFRSEAGSAGKDTSGMLRQHQFEKVEMVSITTPETSLAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE IL++L L YR + LCTGD+GF A KT+DLEVWL GQN YREISS S CG+FQ Sbjct: 301 RMTGCAEAILQKLGLPYRTIVLCTGDMGFGATKTHDLEVWLPGQNTYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R +F HTLNGSG+AVGRCLIA+LEN DGSV +P L PY+ Sbjct: 361 ARRMNARFRPAGGGKPEFVHTLNGSGLAVGRCLIAVLENGQQEDGSVELPEALHPYLGGK 420 Query: 421 AVIKKEHILE 430 I + LE Sbjct: 421 TRISADGTLE 430 >gi|77462339|ref|YP_351843.1| seryl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] gi|77386757|gb|ABA77942.1| seryl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] Length = 430 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 216/430 (50%), Positives = 280/430 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+ P+ D AL +R L S IL++DE R I E +A +N S ++G Sbjct: 1 MHDIRIIREFPDRFDTALSRRGLSALSGEILAIDEARRSKILAAETAQAEQNRASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ + K ++ L +E + L+ +++ IPN+PL+EVP G + Sbjct: 61 AKARGDEAEFERLRALVAEKKAEVARLNEEAAAEDARLRDMLAAIPNLPLDEVPEGPDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G +EHFEI MDF A KLSG+RF +L G + + RAL Q Sbjct: 121 ANVEIRRWGTPRGFNFAPKEHFEIAGVKPGMDFATAAKLSGSRFVMLKGAVIRVHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H +EHG TE P+LV+DEAM+GTGQ+PKF++D + TT+G WLIPTSEV+LTN Sbjct: 181 FMLDTHVTEHGLTETWTPVLVKDEAMFGTGQLPKFSEDSYQTTNGWWLIPTSEVTLTNSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ LP+R T FRSEAGSAG+DT GMLRQHQF K E+VSIT E S EHE Sbjct: 241 AGEILDEAQLPIRMTAHTQCFRSEAGSAGKDTSGMLRQHQFEKVEMVSITTPETSLAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE IL++L L YR + LCTGD+GF A KT+DLEVWL GQN YREISS S CG+FQ Sbjct: 301 RMTGCAEAILQKLGLPYRTIVLCTGDMGFGATKTHDLEVWLPGQNTYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R +F HTLNGSG+AVGRCLIA+LEN DGSV +P L PY+ Sbjct: 361 ARRMNARFRPAGGGKPEFVHTLNGSGLAVGRCLIAVLENGQQEDGSVELPEALHPYLGGK 420 Query: 421 AVIKKEHILE 430 I + LE Sbjct: 421 TRISADGTLE 430 >gi|298530167|ref|ZP_07017569.1| seryl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298509541|gb|EFI33445.1| seryl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 425 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 278/426 (65%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R+NP+ + ++K R + L L+++ R L ++++D++ RRN S ++ Sbjct: 1 MLDIKFVRKNPDLVAKSIKDRGAAQDLDDFLKLEQQRRELTQRVQDLKTRRNQASQEVAL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A EG S L +++ L+ E + + + + +PN+P +VP+G+ + Sbjct: 61 AKREGR--DAAQAMEGLSELSDKIKELDGELKGLDRQVHEWLLSVPNIPAGDVPVGSDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N ++R+ G+KP REH+++G LG +DF+ A K++G+RF + G A LERAL Sbjct: 119 DNQVVRTWGEKPVMDFQPREHWDLGVELGGLDFEHAAKMTGSRFVMYVGWGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+D+ T EHGY E P++V ++M TGQ+PKFADD+F +LIPT+EV LTN+ Sbjct: 179 FMLDVQTGEHGYMETMPPMIVNRDSMTATGQLPKFADDLFKLENWEYYLIPTAEVPLTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E+++ LPL +T FRSEAGS G+DTRG++RQHQF K ELV +DSF + Sbjct: 239 HRGEVLQEDQLPLAYTAFTGCFRSEAGSHGKDTRGIIRQHQFNKVELVRFAHPDDSFKQL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E +L AEEILKRL LHYRVV+LCTGDLGF A KTYD+EVWL GQ YREISSCS +F Sbjct: 299 ELLLGHAEEILKRLGLHYRVVNLCTGDLGFGAAKTYDIEVWLPGQGKYREISSCSNFTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R++ K + HTLNGSG+AVGR L+AI+EN DGS+ IP VLRPY Sbjct: 359 QARRGDIRFKPAQEKKSRLVHTLNGSGLAVGRALVAIMENCQQKDGSIVIPEVLRPYTGG 418 Query: 420 LAVIKK 425 + +I+K Sbjct: 419 MDIIRK 424 >gi|296103101|ref|YP_003613247.1| seryl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057560|gb|ADF62298.1| seryl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 430 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 271/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDQAKAELDVLQAEIRDIALAIPNIPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G R+H +GE +DF A KL+G+RF V+ G +AHL RAL Q Sbjct: 119 DNVEVKRWGTPREFDFEVRDHVTLGEMHAGLDFAAAVKLTGSRFVVMKGQIAHLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T +P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S E M AE++L+ L L YR ++LCTGD+GF ACKT+DLEVW+ QN YREISS Sbjct: 299 EESMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGACKTFDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A+LENY ADG + IP V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEIPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM I Sbjct: 419 LRPYMKGQQYI 429 >gi|323701687|ref|ZP_08113359.1| seryl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323533460|gb|EGB23327.1| seryl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 424 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 272/425 (64%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R NPE + L KR + L LD K R + +E ++ RN S +IG+ Sbjct: 1 MLDIKFVRSNPELVKEGLAKRGANISLDEFLELDAKRREKLVVVEQLKNTRNVVSQEIGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + L E + +Q+ ++ E + L +++ IPN+P E VP+G N Sbjct: 61 LKKAGQDAEEKQL--EMRQVSQQIKDIDDEIRTIEERLGEILLAIPNLPHESVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + H+E+GEAL ++DF+RA K++GARF+ G A LERAL Sbjct: 119 DNLEVRRWGRPREFDFTPKPHWELGEALNILDFERAGKVTGARFTFYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHT EHGYTEV P +V ++M GTGQ+PKFADDMF +LIPT+EV +TNL Sbjct: 179 FMLDLHTREHGYTEVFPPFIVNSDSMVGTGQLPKFADDMFKLEGLNYYLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+ + LP+ + FR+EAG+AGRDTRG++RQHQF K ELV + EDSF E Sbjct: 239 YREEILSGEQLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFCKPEDSFDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AE++L+ L L YRVV LC+GD+GF++ KTYDLEVWL N Y+EISSCS +F Sbjct: 299 EKLTVNAEKVLQALGLPYRVVLLCSGDMGFASAKTYDLEVWLPSYNAYKEISSCSNFQDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSGVA+GR L AILENY ADGS+T+P VL PYM Sbjct: 359 QARRANIKFRREPKSKPEFVHTLNGSGVAIGRALSAILENYQEADGSITVPPVLVPYMGG 418 Query: 420 LAVIK 424 + I Sbjct: 419 IEKIT 423 >gi|150396386|ref|YP_001326853.1| seryl-tRNA synthetase [Sinorhizobium medicae WSM419] gi|166223291|sp|A6U8N8|SYS_SINMW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|150027901|gb|ABR60018.1| seryl-tRNA synthetase [Sinorhizobium medicae WSM419] Length = 427 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 261/425 (61%), Positives = 324/425 (76%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+N + LD AL KR P S +++LDE+ R +++ ++D+++RRN+ S +IG Sbjct: 1 MLDIKWIRENADVLDSALAKRGAGPLSASLIALDERRRTILQSLQDMQSRRNAASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A+ N L D LK E + LK LP E+E + + L +S IPN PL++VP+G + Sbjct: 61 AMAQKNSELADRLKAEVAELKTTLPAAEEESRRIEAELTDALSRIPNAPLDDVPVGADES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++ R VG KP+ H EHFEIGEALGLMDF+ A +++G+RF++L G LA LERALGQ Sbjct: 121 ANVVTRVVGAKPTWNHKPLEHFEIGEALGLMDFEGAARIAGSRFTILKGQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGY EV PLLVRD+AMYGTGQ+PKF DD+F TTDGRWLIPT+EV LTN+ Sbjct: 181 FMLDLHTGEHGYIEVQPPLLVRDDAMYGTGQLPKFTDDLFRTTDGRWLIPTAEVPLTNMV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +I++ + LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K ELVSIT E + EHE Sbjct: 241 REQILDGEKLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFNKVELVSITDAESALDEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL LHYRV++LCTGD+GFSA KTYDLEVWL GQ+ YREISSCS CG+FQ Sbjct: 301 RMTACAEEVLKRLGLHYRVMTLCTGDMGFSARKTYDLEVWLPGQDAYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR K KF HTLNGSGVA+GR LIA++ENYLN DGS+T+P L YM L Sbjct: 361 GRRMNARYRGKEEKGTKFAHTLNGSGVALGRALIAVIENYLNEDGSITVPDALIAYMGGL 420 Query: 421 AVIKK 425 I+K Sbjct: 421 RRIEK 425 >gi|237730858|ref|ZP_04561339.1| seryl-tRNA synthetase [Citrobacter sp. 30_2] gi|226906397|gb|EEH92315.1| seryl-tRNA synthetase [Citrobacter sp. 30_2] Length = 430 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 271/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLASRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G +++L+ E + L E+L + E + + ++ + IPN+P ++VP+G N Sbjct: 61 AKARG--EDIESLRLEVNKLGEELDAAKAELDTLQAEIRDIALTIPNLPADDVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHTGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ +LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDALPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMDALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLKFI 429 >gi|189426285|ref|YP_001953462.1| seryl-tRNA synthetase [Geobacter lovleyi SZ] gi|238692147|sp|B3EAQ9|SYS_GEOLS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189422544|gb|ACD96942.1| seryl-tRNA synthetase [Geobacter lovleyi SZ] Length = 423 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 194/426 (45%), Positives = 270/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + AL R LD + R L+ + E ++A +NS S +I + Sbjct: 1 MLDVKFIRDNLDQAEAALATRGGAISLARFRELDAQRRKLLTESETLKALKNSVSEEIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S V E + ++ + E V L+ IPN+P P+G S Sbjct: 61 VK---DKSTVKDKIAEMKEVSAKIKTFDDELKIVEEEFDTLLMTIPNLPHPTTPVGKSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+++RS G P + H+++ E L ++DF+RATK++GARF + A LERAL Sbjct: 118 ENVIVRSWGSLPEMAFEPKPHWDLAEDLDILDFERATKITGARFCLSKRAGARLERALIS 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH++EHGYTEV P +V +M GTGQ+PKF +D+F D + IPT+EV +TN+ Sbjct: 178 FMLDLHSTEHGYTEVLPPFMVNRASMTGTGQLPKFEEDLFRLMDPEYFLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ LP+ +T P FR EAGS G+DTRG++RQHQF K ELV ++S E Sbjct: 238 HRDEILKKSDLPISYTAYTPCFRREAGSYGKDTRGLIRQHQFNKVELVKFVHPDESQAEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AE++L+ L+L YRV++LC+GD+GFSACKTYDLEVWL QN YREISSCS+ G+F Sbjct: 298 EKLTGHAEKVLQLLELPYRVMALCSGDIGFSACKTYDLEVWLPSQNTYREISSCSSFGDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R+R+ +F HTLNGSG+AVGR L+AILENY ADGS+ IPT LRPYM Sbjct: 358 QARRAGIRFREDEKSKPEFVHTLNGSGLAVGRTLVAILENYQQADGSIIIPTALRPYMGG 417 Query: 420 LAVIKK 425 + I K Sbjct: 418 IEKITK 423 >gi|16759834|ref|NP_455451.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764324|ref|NP_459939.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142393|ref|NP_805735.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413985|ref|YP_151060.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179487|ref|YP_215904.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614806|ref|YP_001588771.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550365|ref|ZP_02344122.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994705|ref|ZP_02575796.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230857|ref|ZP_02655915.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168263551|ref|ZP_02685524.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466548|ref|ZP_02700410.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822936|ref|ZP_02834936.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445741|ref|YP_002040162.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194471358|ref|ZP_03077342.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197249370|ref|YP_002145881.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262813|ref|ZP_03162887.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362908|ref|YP_002142545.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198244710|ref|YP_002214887.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390080|ref|ZP_03216691.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205352171|ref|YP_002225972.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856355|ref|YP_002243006.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213428591|ref|ZP_03361341.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580909|ref|ZP_03362735.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609744|ref|ZP_03369570.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213851472|ref|ZP_03381370.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238913262|ref|ZP_04657099.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289830102|ref|ZP_06547533.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|54039690|sp|P67564|SYS_SALTI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|54042041|sp|P67563|SYS_SALTY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67461661|sp|Q5PGI6|SYS_SALPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|81309725|sp|Q57R38|SYS_SALCH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083584|sp|A9N7X6|SYS_SALPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238689928|sp|B5BBR2|SYS_SALPK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238690019|sp|B5F146|SYS_SALA4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238690350|sp|B5FQ36|SYS_SALDC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238690425|sp|B5QYP4|SYS_SALEP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238690487|sp|B5R8I1|SYS_SALG2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238693584|sp|B4T128|SYS_SALNS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|25293157|pir||AI0611 seryl-tRNA synthetase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419475|gb|AAL19898.1| serine tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502127|emb|CAD05363.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29138023|gb|AAO69584.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128242|gb|AAV77748.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127120|gb|AAX64823.1| serine tRNA synthetase ; also charges selenocystein tRNA with serine [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364170|gb|ABX67938.1| hypothetical protein SPAB_02558 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404404|gb|ACF64626.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194457722|gb|EDX46561.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195631016|gb|EDX49602.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094385|emb|CAR59900.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213073|gb|ACH50470.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241068|gb|EDY23688.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197939226|gb|ACH76559.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602525|gb|EDZ01071.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205271952|emb|CAR36796.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324587|gb|EDZ12426.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327478|gb|EDZ14242.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334663|gb|EDZ21427.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340753|gb|EDZ27517.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347703|gb|EDZ34334.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708158|emb|CAR32451.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246180|emb|CBG23984.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992697|gb|ACY87582.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157507|emb|CBW16997.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911951|dbj|BAJ35925.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085200|emb|CBY94986.1| Seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223287|gb|EFX48356.1| Seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322713956|gb|EFZ05527.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129229|gb|ADX16659.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622640|gb|EGE28985.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627215|gb|EGE33558.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987855|gb|AEF06838.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 430 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDTLLAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|283784715|ref|YP_003364580.1| seryl-tRNA synthetase [Citrobacter rodentium ICC168] gi|282948169|emb|CBG87736.1| seryl-tRNA synthetase [Citrobacter rodentium ICC168] Length = 430 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P ++VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDVLQAEIRDIALTIPNLPADDVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPRQFDFEVRDHVTLGEMHTGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDLLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIVLCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|157146419|ref|YP_001453738.1| seryl-tRNA synthetase [Citrobacter koseri ATCC BAA-895] gi|166219863|sp|A8AII9|SYS_CITK8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157083624|gb|ABV13302.1| hypothetical protein CKO_02178 [Citrobacter koseri ATCC BAA-895] Length = 430 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 196/431 (45%), Positives = 270/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P ++VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELESLQAEIRDIALTIPNLPADDVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFDVRDHVTLGEMHAGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ +LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDALPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EESMDALEEMTGHAEKVLQLLGLPYRKIVLCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|260433300|ref|ZP_05787271.1| seryl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260417128|gb|EEX10387.1| seryl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 430 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 210/429 (48%), Positives = 283/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R P S +L LDE R I E +A +N S ++G Sbjct: 1 MHDIRAIRENPAAFDAALARRGEAPISAELLRLDEARRAKILAAETAQAEQNKASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + L+ + K ++ ++ E ++ + L + IPN+P E+VP G N Sbjct: 61 AKARGDEAEFQRLRALVAEKKAEIARMQTEAKDLDALLTDQLIRIPNLPAEDVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G + ++EHFEI MDF+ A KL+G+RF +L+G +A + RAL Q Sbjct: 121 DNVEVNRWGTPRAFDFDAKEHFEIEAVQNGMDFETAAKLAGSRFVLLSGGVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H +E+G TEV+AP+LV E M GTGQ+PKF +D + T +G WLIPTSEVSLTN+ Sbjct: 181 FMLDTHINENGLTEVNAPVLVLSEMMMGTGQLPKFGEDSYQTREGWWLIPTSEVSLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +IE LP R+T + FRSEAGSAG+DTRGMLRQHQF K E+VSIT + S E + Sbjct: 241 NDTMIEESYLPRRYTAHSLCFRSEAGSAGKDTRGMLRQHQFEKVEMVSITHPDKSDEEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE IL++L + YR V LCTGD+GF A +TYD+E WL GQN YREISS STCG+FQ Sbjct: 301 RMLRCAEGILEKLGVPYRTVILCTGDMGFGARRTYDIEAWLPGQNTYREISSVSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R ++ HTLNGSG+AVGRCLIA+LEN ADG+V +P VL PY+ Sbjct: 361 ARRMNARFRPEGGGKPEYVHTLNGSGLAVGRCLIAVLENGQQADGTVILPEVLAPYLGGK 420 Query: 421 AVIKKEHIL 429 ++K+ L Sbjct: 421 LTLQKDGTL 429 >gi|114570456|ref|YP_757136.1| seryl-tRNA synthetase [Maricaulis maris MCS10] gi|122315709|sp|Q0AND9|SYS_MARMM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|114340918|gb|ABI66198.1| seryl-tRNA synthetase [Maricaulis maris MCS10] Length = 425 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 219/424 (51%), Positives = 287/424 (67%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP+ D L R L QS ++ LD R + K +D RN+ S QIG+ Sbjct: 1 MHDIKLIRDNPDAFDAGLAMRGLPAQSATLIELDASRREALGKQQDAETERNALSKQIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L++E LK L ++ L + ++ +PN+P +VP G Sbjct: 61 AKASGDEAEFNRLRSEVDRLKAVLEESGQQARHFDEVLNQHLAALPNLPHADVPQGADEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ R G+ + R+H ++GE+LG MDF +A ++SG+RF L G LA LERAL Q Sbjct: 121 DNVEERRWGEPRTMAFTPRDHVDLGESLGQMDFKKAAEISGSRFVALRGGLARLERALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGY EVS P +VRDEA++GTGQ+PKFA+D+F TTD WLIPT+EV LTNL Sbjct: 181 FMLDLHTTEHGYEEVSPPYMVRDEAVFGTGQLPKFAEDLFRTTDDHWLIPTAEVPLTNLA 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I LP+R T P FRSEAGSAGRDTRGM+R HQF K E+VSI ++S E E Sbjct: 241 RETIHAEADLPMRMTAYTPCFRSEAGSAGRDTRGMIRLHQFQKVEMVSIVTPDESDAELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE++L+ L+L YRV+ LCTGD+GF+A +TYDLEVW+ Q+ YREISSCSTCG+FQ Sbjct: 301 RMTGCAEKVLQLLELPYRVMKLCTGDMGFAARRTYDLEVWMPSQDCYREISSCSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM++R+R K F HTLNGSGVAVGR L+A+LEN+ N DGS+TIP LRPYM + Sbjct: 361 ARRMDARFRKEGEKRPAFLHTLNGSGVAVGRALVAVLENHQNEDGSITIPAALRPYMGGV 420 Query: 421 AVIK 424 I+ Sbjct: 421 ERIE 424 >gi|154253470|ref|YP_001414294.1| seryl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] gi|171769667|sp|A7HXK4|SYS_PARL1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|154157420|gb|ABS64637.1| seryl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] Length = 435 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 232/431 (53%), Positives = 307/431 (71%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR + D L KR L PQ+ ++ +DE+ R +I +++++ RRN S QIGQ Sbjct: 1 MFDIKAIRDDAGAFDAGLAKRGLAPQAARLIEIDERRRAIITSLQELQQRRNDASKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+ + +L +L E +++K + E++E + ++ ++ IPN+P ++VP+G + Sbjct: 61 AKAKKDDALAQSLMEEVASIKSAIQEGEEKERAANAEIEAALASIPNIPFDDVPVGPDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++ S GK +EHF++GEALGLMDF+ A K+SGARF+VL G LA LERA+G Sbjct: 121 ANVIRHSHGKAREMNFAPKEHFDLGEALGLMDFEAAAKMSGARFTVLKGQLARLERAIGN 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------DGRWLIPTS 232 FM+DLHT+E GY EV+ PL+VRD+AM+GT Q+PKF DD F T + WLIPT+ Sbjct: 181 FMVDLHTTEFGYEEVAPPLMVRDDAMFGTAQLPKFEDDQFATFKGLARDDQEKYWLIPTA 240 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL I+ + LP RFT FR+EAGSAGRDTRGM+RQHQF K ELVSIT Sbjct: 241 EVPLTNLVRESILSEEELPKRFTAYTACFRAEAGSAGRDTRGMIRQHQFSKVELVSITTP 300 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S EHERMLSCAEE+LKRLDLHYRV++L TGD+GF++ KTYD+EVWL GQN +REISS Sbjct: 301 EKSREEHERMLSCAEEVLKRLDLHYRVMTLSTGDMGFASRKTYDIEVWLPGQNAFREISS 360 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS CG+FQ+RRMN+RYR K+ +F HTLNGSG+AVGR L+A++ENY ADGS+T+PT Sbjct: 361 CSVCGDFQARRMNARYRPKGEKNTRFVHTLNGSGLAVGRALVAVMENYQQADGSITVPTA 420 Query: 413 LRPYMNNLAVI 423 L+PYM VI Sbjct: 421 LQPYMGGQEVI 431 >gi|304311216|ref|YP_003810814.1| Seryl-tRNA synthetase [gamma proteobacterium HdN1] gi|301796949|emb|CBL45162.1| Seryl-tRNA synthetase [gamma proteobacterium HdN1] Length = 427 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 274/428 (64%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + IR + + L R + + + SL+E+ + L + E +++ RN+ S IG+ Sbjct: 1 MLDPKIIRGQLDFVAERLALRGMTLDTGLLTSLEEQRKGLQVQTEQLQSERNARSKAIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + V L E TL +QL E + E+ L+ + +PN+P E VP G S Sbjct: 61 AKAQGQDTSV--LLAEVDTLGDQLSQCENQLKELMVRLQDVYYGLPNLPHESVPKGASEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G R+H +IGEALG +DF+ A K++GARF V+ G LA + RAL Q Sbjct: 119 DNVEVRRWGAPREFDFEPRDHVDIGEALGELDFEVAAKITGARFVVMNGALARMHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HTS++GY EV P +V ++++ GTGQ+PKF +++ +LIPT+EV +TN Sbjct: 179 FMLDTHTSQNGYQEVYVPYVVNEDSLKGTGQLPKFGQELYRLEGEKAFYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L EI+ LP +F P FRSEAG+ G+D RGM+RQHQF K ELV I R EDS+ Sbjct: 239 LMRDEIVAEDELPKKFACHTPCFRSEAGAYGKDVRGMIRQHQFEKIELVQIVRPEDSYAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE IL++L+L YRV++LC GD+GFS+ KTYD+EVWL GQ YREISSCS + Sbjct: 299 LEALTGHAESILQKLNLPYRVITLCGGDIGFSSAKTYDIEVWLPGQQKYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYR NSK + HTLNGSG+AVGR L+AILENY ADGSV +P L PYM Sbjct: 359 FQARRLQARYRPNNSKKPELVHTLNGSGLAVGRTLVAILENYQQADGSVLVPEALLPYMG 418 Query: 419 NLAVIKKE 426 + V++ Sbjct: 419 GVTVLRPT 426 >gi|239825598|ref|YP_002948222.1| seryl-tRNA synthetase [Geobacillus sp. WCH70] gi|259511672|sp|C5D340|SYS_GEOSW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|239805891|gb|ACS22956.1| seryl-tRNA synthetase [Geobacillus sp. WCH70] Length = 424 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 195/426 (45%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++++R + E + L KR + + LD+K R LI K E+++ +RN S QI Sbjct: 1 MLDVKYLRNHFEEVKEKLLKRGEDLTNIDRFEELDKKRRELIAKAEELKNKRNEVSQQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D L E + +++ ++ E +V L L+ IPN+P E VP+G S Sbjct: 61 VLKREKK--DADHLIAEMRDVGDRIKTMDDEIRQVEEELNALLLSIPNIPHESVPVGKSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ S + H++I E LG++DF+RA K++G+RF G A LERAL Sbjct: 119 EDNVEVRKWGEPRSFSFEPKPHWDIAEQLGILDFERAAKVTGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D+H E GY E+ P LV +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMLDVHIEEFGYQEILPPYLVNRASMTGTGQLPKFEEDAFRIETDDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ ++ LP+ + + FR+EAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 LHRDEILSAEDLPIYYVAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE IL+ L L YRVV LCTGDLGFS+ KTYD+EVWL YREISSCS Sbjct: 299 LEKLTNQAERILQLLGLPYRVVCLCTGDLGFSSAKTYDIEVWLPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY DG+V IP VLRPYM Sbjct: 359 FQARRANIRFRREPKAKPEYVHTLNGSGLAIGRTVAAILENYQQEDGTVVIPEVLRPYMG 418 Query: 419 NLAVIK 424 NL VI+ Sbjct: 419 NLEVIR 424 >gi|168240814|ref|ZP_02665746.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194451035|ref|YP_002044956.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|238690614|sp|B4TD24|SYS_SALHS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|194409339|gb|ACF69558.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205340363|gb|EDZ27127.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 430 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELETLLAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|204930096|ref|ZP_03221117.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321090|gb|EDZ06291.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322616395|gb|EFY13304.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619645|gb|EFY16520.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622659|gb|EFY19504.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628572|gb|EFY25359.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634947|gb|EFY31676.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637035|gb|EFY33738.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641604|gb|EFY38241.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644441|gb|EFY40981.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649589|gb|EFY46020.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654109|gb|EFY50432.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659224|gb|EFY55473.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663498|gb|EFY59700.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670234|gb|EFY66374.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671470|gb|EFY67592.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676826|gb|EFY72893.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682751|gb|EFY78770.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686430|gb|EFY82412.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323191716|gb|EFZ76970.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199759|gb|EFZ84848.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202196|gb|EFZ87250.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209023|gb|EFZ93960.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210415|gb|EFZ95304.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215844|gb|EGA00584.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222449|gb|EGA06823.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226864|gb|EGA11047.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229818|gb|EGA13941.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233043|gb|EGA17139.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240778|gb|EGA24820.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243095|gb|EGA27115.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247417|gb|EGA31373.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250911|gb|EGA34788.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256446|gb|EGA40180.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263112|gb|EGA46654.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267978|gb|EGA51457.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270716|gb|EGA54156.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 430 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDTLLAEIRNIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|303232994|ref|ZP_07319674.1| serine--tRNA ligase [Atopobium vaginae PB189-T1-4] gi|302480921|gb|EFL44001.1| serine--tRNA ligase [Atopobium vaginae PB189-T1-4] Length = 429 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 275/427 (64%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R+NP+ +D A R + + +LDE+ R I ++E ++A RN+ S QIG Sbjct: 1 MLDIKFVRENPDCVDKACASRQNAHWDRDAFFALDEQRRSTIVEVEKLQAHRNAVSKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A G K E + KE++ LE+ E L L+S IPN+P +P G Sbjct: 61 KLMAAGKTQEAQDAKQEVAHNKERIAELERTRTECEQKLHDLVSAIPNIPDASIPYGKDD 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G S H+++G A ++DFDR KL+G+RF VL G+ A +ERAL Sbjct: 121 SENVEVRRWGTPTSFDFEPSAHWDLGTANKMIDFDRGVKLAGSRFYVLGGYGAQMERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 F ID+H + G+ E P+L ++++GTGQ+PKF +D+F +D +LIPT+EV LTNL Sbjct: 181 NFFIDMHA-KAGFKEWWPPVLTNYDSLFGTGQLPKFDEDLFHVSDNLYLIPTAEVMLTNL 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E++++ LPL +T P FR EAGSAGRDTRG++R H+F K E+V E+S E Sbjct: 240 HRDEVLDAAQLPLLYTAFTPCFREEAGSAGRDTRGIIRVHEFDKVEMVKFATPENSMNEL 299 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M+ AE L+ L L YRVVSLCTGD+GFSACK YDLEVWL N Y+EISSCS C +F Sbjct: 300 ELMVGEAEACLQTLGLPYRVVSLCTGDIGFSACKCYDLEVWLPSYNNYKEISSCSNCWDF 359 Query: 360 QSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RR N RYRD S K ++ HTLNGSG+AVGR + AI+ENY ADGS+ +P LRPYM Sbjct: 360 QARRANIRYRDAASFKGTRYVHTLNGSGLAVGRTMAAIMENYQQADGSIVVPEALRPYMR 419 Query: 419 NLAVIKK 425 L VI Sbjct: 420 GLEVIPP 426 >gi|260768113|ref|ZP_05877047.1| seryl-tRNA synthetase [Vibrio furnissii CIP 102972] gi|260616143|gb|EEX41328.1| seryl-tRNA synthetase [Vibrio furnissii CIP 102972] Length = 435 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 189/434 (43%), Positives = 265/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + + I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVDTIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +++G+ + +K + TL + L + E + S L + +PN+P + VP G N Sbjct: 61 LMSKGDKEGAEEVKKQIGTLGDDLDAKKVELDAIQSQLDAITQSVPNLPDDSVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G ++H ++GE +DF ATK++GARF ++ G A L RA+ Q Sbjct: 121 DNVEVSRWGTPKEYDFDVKDHVDLGEMGDGLDFASATKITGARFVIMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE+ P LV + ++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEQHGYTELYVPYLVNSDTLFGTGQLPKFGKDLFHTEPLAEKASDEEPRRLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I E LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTITEEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF ACKTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGACKTYDLEVWVPAQKTYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILENY ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQQADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM + I Sbjct: 421 PAVLQKYMGGVTHI 434 >gi|197284595|ref|YP_002150467.1| seryl-tRNA synthetase [Proteus mirabilis HI4320] gi|227356777|ref|ZP_03841162.1| seryl-tRNA synthetase [Proteus mirabilis ATCC 29906] gi|238693172|sp|B4EV93|SYS_PROMH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|194682082|emb|CAR41638.1| seryl-tRNA synthetase [Proteus mirabilis HI4320] gi|227163067|gb|EEI48002.1| seryl-tRNA synthetase [Proteus mirabilis ATCC 29906] Length = 429 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 191/430 (44%), Positives = 261/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R E I +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRNELDAVAEKLARRGFTLDVEKIRQQEERRKVLQVETESLQAERNSRSKSIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ +PN+P + VP G + Sbjct: 61 AKARG--EDIEPLRQEVNQLGEKLEAAKAELDKLQADIRDYALTLPNLPHDSVPNGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G+ + ++H +GE +DF A K++G+RF V+ G +A L RA+ Q Sbjct: 119 ENVEVFRWGEPKTYDFELKDHVTLGELTDGLDFPSAVKITGSRFVVMKGQIARLHRAIAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM++LHT +HGY E+ P LV +YGTGQ+PKF+ D+F T LIPT+E Sbjct: 179 FMLNLHTEQHGYQEMYVPYLVNHATLYGTGQLPKFSGDLFHTKPLEEESESQYALIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TN+ I+E LPLR T P FRSEAGS GRDTRG++R HQF K ELV I E Sbjct: 239 VPVTNMVRDVILEEDELPLRMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVHPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 299 KSMDALEELTGHAEKVLQLLNLPYRKVVLCTGDMGFGARKTYDLEVWVPAQNTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R+R K + HTLNGSG+AVGR L+AI+ENY ADG + IP VL Sbjct: 359 SNCWDFQARRMQARFRAKGDKKTQLVHTLNGSGLAVGRTLVAIMENYQTADGRIEIPEVL 418 Query: 414 RPYMNNLAVI 423 RPYMN L I Sbjct: 419 RPYMNGLEYI 428 >gi|149928208|ref|ZP_01916453.1| seryl-tRNA synthetase [Limnobacter sp. MED105] gi|149823099|gb|EDM82339.1| seryl-tRNA synthetase [Limnobacter sp. MED105] Length = 429 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 281/433 (64%), Gaps = 12/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ ++ L +R E +L+ K + L E+++A+RNS S QIGQ Sbjct: 1 MLDIQLLRKDLTNVAERLAQRGYSLDIEQFNALEGKRKQLQTSTEELQAKRNSMSKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G V A+ E + L ++L E + + + + IPN+P E VP G S Sbjct: 61 LKAKG--EDVSAVMAEVAGLGDELKRNETDLAALQEEVNAFLLNIPNLPHESVPAGKSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI +R G ++H ++GE LG +DF+ A LSG+RF+VL G +A L RAL Q Sbjct: 119 DNIELRRWGTPAQFDFEVKDHVDLGEKLG-LDFETAANLSGSRFAVLKGQIAKLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--------TTDGRWLIPTS 232 FM+D HT +HGYTE P +VR E + GTGQ+PKFADD+F T++ +LIPT+ Sbjct: 178 FMLDTHTEQHGYTEHYTPYIVRGETLKGTGQLPKFADDLFSVKKGGEEGTSEPLYLIPTA 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV+LTNL + +I+++ LP++ T +P FRSEAGS GRDTRG++RQHQF K E+V I Sbjct: 238 EVTLTNLVADQILKASDLPIKMTAHSPCFRSEAGSYGRDTRGLIRQHQFDKVEMVRIENP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S+ + M AE IL++L L YRV+ LCTGD+GF + +T+D+EVWL QN YREISS Sbjct: 298 ENSYAALDEMTQHAENILQKLGLPYRVIVLCTGDMGFGSTRTHDIEVWLPAQNTYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS C FQ+RRM +R+++ KS +F HTLNGSG+AVGR L+A+LENY ADGSV +P Sbjct: 358 CSNCETFQARRMKARFKNEAGKS-EFVHTLNGSGLAVGRTLVAVLENYQQADGSVKVPEA 416 Query: 413 LRPYMNNLAVIKK 425 L+PYM V+K Sbjct: 417 LQPYMGGKTVLKP 429 >gi|146276505|ref|YP_001166664.1| seryl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145554746|gb|ABP69359.1| seryl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 430 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 215/430 (50%), Positives = 282/430 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP+ D AL +R L S IL++DE R I E +A +N S +G Sbjct: 1 MHDIRAIRENPDRFDTALARRGLSALSGEILAIDEARRSKILAAETAQAEQNRASKDVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ + K ++ L +E + L+ ++ +PN+PL++VP G + Sbjct: 61 AKARGDEAEFERLRALVAEKKAEIARLNEEAAAEDARLRDMLVALPNLPLDDVPDGPDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G + +EHFEI MDF A KLSG+RF +LTG + + RAL Q Sbjct: 121 ANVEIRRWGAPRNFSFTPKEHFEIAGVKPGMDFATAAKLSGSRFVMLTGAVIRVHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H +EHG TE P+LV+DEAM+GTGQ+PKF++D + TT+G WLIPT+EV+LTN Sbjct: 181 FMLDTHVAEHGLTETWTPVLVKDEAMFGTGQLPKFSEDSYQTTNGWWLIPTAEVTLTNTV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI+E LP+R T FRSEAGSAG+DT GMLRQHQF K E+VSIT E S EHE Sbjct: 241 AGEILEEAQLPIRMTAHTQCFRSEAGSAGKDTAGMLRQHQFEKVEMVSITTPETSRAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE IL++L L YR + LCTGD+GF A +T+DLEVWL GQN YREISS S CG+FQ Sbjct: 301 RMTRCAEAILEKLGLPYRTIVLCTGDMGFGATRTHDLEVWLPGQNTYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R +F HTLNGSG+AVGRCLIA+LEN DG+V +P VL PY+ Sbjct: 361 ARRMNARFRPAGGGKPEFVHTLNGSGLAVGRCLIAVLENGQQEDGAVELPAVLHPYLGGK 420 Query: 421 AVIKKEHILE 430 I + LE Sbjct: 421 GRIAADGTLE 430 >gi|161503911|ref|YP_001571023.1| seryl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189083583|sp|A9MHZ1|SYS_SALAR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|160865258|gb|ABX21881.1| hypothetical protein SARI_02001 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 430 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRREVNKLGEELDAAKAELEALLAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMRGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNIWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|221638196|ref|YP_002524458.1| seryl-tRNA synthetase [Rhodobacter sphaeroides KD131] gi|221158977|gb|ACL99956.1| Seryl-tRNA synthetase [Rhodobacter sphaeroides KD131] Length = 430 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 214/430 (49%), Positives = 279/430 (64%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+ P+ D AL +R L S IL++DE R I + +A +N S ++G Sbjct: 1 MHDIRIIREFPDRFDTALSRRGLSALSGEILAIDEARRSKILAADTAQAEQNRASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ + K ++ L +E + L+ ++ IPN+PL+EVP G + Sbjct: 61 AKARGDEAEFERLRALLAEKKAEVARLNEEAAAEDARLRDMLVAIPNLPLDEVPEGPDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G +EHFEI MDF A K+SG+RF +L G + + RAL Q Sbjct: 121 ANVEIRRWGTPRGFNFAPKEHFEIAGVKPGMDFATAAKISGSRFVMLKGAVIRVHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H +EHG TE P+LV+DEAM+GTGQ+PKF++D + TT+G WLIPTSEV+LTN Sbjct: 181 FMLDTHVTEHGLTETWTPVLVKDEAMFGTGQLPKFSEDSYQTTNGWWLIPTSEVTLTNSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ LP+R T FRSEAGSAG+DT GMLRQHQF K E+VSIT E S EHE Sbjct: 241 AGEILDEAQLPIRMTAHTQCFRSEAGSAGKDTSGMLRQHQFEKVEMVSITTPETSLAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE IL++L L YR + LCTGD+GF A KT+DLEVWL GQN YREISS S CG+FQ Sbjct: 301 RMTGCAEAILQKLGLPYRTIVLCTGDMGFGATKTHDLEVWLPGQNTYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R +F HTLNGSG+AVGRCLIA+LEN DGSV +P L PY+ Sbjct: 361 ARRMNARFRPAGGGKPEFVHTLNGSGLAVGRCLIAVLENGQQEDGSVELPEALHPYLGGK 420 Query: 421 AVIKKEHILE 430 I + LE Sbjct: 421 TRISADGTLE 430 >gi|218887314|ref|YP_002436635.1| seryl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226701585|sp|B8DQP8|SYS_DESVM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|218758268|gb|ACL09167.1| seryl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 425 Score = 443 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 191/427 (44%), Positives = 271/427 (63%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ ++++PE + AL R +LDE+ R L+ ++E ++ RN S ++ + Sbjct: 1 MLDLKLLQRSPEVVAKALADRGSSLDMAEFTALDERRRALLAEVEALKGERNKASGEVAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L S L +++ L++E EV +++ + +PN+P VP G S Sbjct: 61 MKRAG--EDAAPLLERLSGLSDRIKDLDRETEEVKAAVNDWLLAVPNIPDASVPFGRSEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + G+ + +EH+EIG ALG +DF+RA KL+G+RF+V A +ERAL Sbjct: 119 DNPEVLRWGEPRAFSFAPKEHWEIGTALGGLDFERAGKLAGSRFAVYRTWAARMERALAN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 F +D H +EHGY E+ P +V + M GTGQ+PKF +D+F +LIPT+EV LTNL Sbjct: 179 FFLDTHVTEHGYVEIIPPFMVNRKTMTGTGQLPKFEEDLFKLEGWDYFLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ +++E LP+ + + P FRSEAGS G+DTRG++RQHQF K E+V E SF E Sbjct: 239 HADDVLEEAQLPMGYAAMTPCFRSEAGSYGKDTRGLIRQHQFTKVEMVRFAHPERSFDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M AE +L+RL L YRV++LCTGD+GFS+ KTYD+EVWL GQN YREISSCS CG+F Sbjct: 299 EKMRGHAEVLLQRLGLPYRVITLCTGDMGFSSAKTYDIEVWLPGQNAYREISSCSNCGDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R+R +F HTLNGSG+AVGR L+A++ENY DGSV IP VLRPYM Sbjct: 359 QARRAGIRFRPAGGGKPEFAHTLNGSGLAVGRALVAVIENYQQEDGSVVIPEVLRPYMGG 418 Query: 420 LAVIKKE 426 + + E Sbjct: 419 MERVTAE 425 >gi|323700066|ref|ZP_08111978.1| seryl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323459998|gb|EGB15863.1| seryl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 425 Score = 443 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 280/427 (65%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ +++NP+ + +L+KRH + LDE+ + LI ++E ++A +N+ +I + Sbjct: 1 MLDLKLMQKNPDLVRASLEKRHSKIDVREFTDLDERRKQLIGEVESLKAEKNAVGPEIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L + + E+ L++E EV + + + +PN+P E VP+G Sbjct: 61 RKKAG--EDASDLLEKMGRVAERTKELDRELAEVEKAEQDWMMSVPNIPHESVPLGAGEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N ++R G+KP +EH+EIG ALG +DF+ A KL+GARFS+ G A LERAL Q Sbjct: 119 DNPVLRYWGEKPVMDFEPKEHWEIGTALGGLDFECAAKLAGARFSISFGWCARLERALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR--WLIPTSEVSLTN 238 M+D T HGYTEV P +V + M GTGQ+PKF +D+F TD R +LIPT+EV LTN Sbjct: 179 LMLDTQTERHGYTEVLPPFMVNRKTMTGTGQLPKFEEDLFKLTDEREFYLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y+ E+I + LP++F P FRSEAGS G+DT+G++RQHQF+K E+V+ + S+ Sbjct: 239 IYADEVIPEEKLPVKFCAQTPCFRSEAGSYGKDTKGLIRQHQFYKVEMVNFAHPDHSYEA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L LHYR + LCTGD+GFSA KTYD+EVWL GQ YREISSCS C + Sbjct: 299 LEEMTHSAERILEILGLHYRTIVLCTGDMGFSAAKTYDIEVWLPGQGKYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ +SK + HTLNGSG+AVGRCL+A+LENY ADGS+ IP LRPYM Sbjct: 359 FQARRANIRFQPKDSKKKLYPHTLNGSGLAVGRCLVAVLENYQQADGSLVIPEALRPYMG 418 Query: 419 NLAVIKK 425 L V+ Sbjct: 419 GLEVVTP 425 >gi|317120858|ref|YP_004100861.1| seryl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] gi|315590838|gb|ADU50134.1| seryl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] Length = 425 Score = 443 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 277/427 (64%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++++RQNPE + AL++R L+P + + +L D + R ++++E++RARRN S IG Sbjct: 1 MLDLRFVRQNPEVVREALRRRRLDPAELDALLDADARWRQDLQQLEELRARRNQTSEAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG + L + + + LE+ + ++ + IP +P +VP G A Sbjct: 61 RLRREG--ADASELIAAMRQVGDSIKELEERVRGLEQEIQDRLLRIPMIPDPDVPEGDDA 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G PS + H+E+G ALGL+DF+RA K++GARF+V G A L RAL Sbjct: 119 DDNVEVRRWGTPPSFDFTPKAHWELGPALGLLDFERAAKITGARFTVFRGRGARLVRALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 QFM+DLHT EHGYTEV P LV ++M GTGQ+PKF +D F +L+PT+EV +TN Sbjct: 179 QFMLDLHTQEHGYTEVLPPFLVHRQSMVGTGQLPKFEEDAFRVADSDFFLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY EI++ LP+ P FR+EAGSAGRDTRG++RQHQF K ELV + S E Sbjct: 239 LYRDEILDGAQLPIYHVAYTPCFRAEAGSAGRDTRGLIRQHQFDKVELVKFVHPDRSAEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE++++ AE +L+RL L YR+V +CTGD+GF+ K YDLEVW+ Y EISSCS + Sbjct: 299 HEKLVADAEAVLQRLGLPYRLVLICTGDMGFAQAKQYDLEVWMPSYGRYVEISSCSNYRD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR N R+R +F HTLNGSG+AVGR L A+LENY ADGSV IP LRPYM Sbjct: 359 YQARRANIRFRPEPGARPQFVHTLNGSGLAVGRTLAALLENYQQADGSVVIPEALRPYMG 418 Query: 419 NLAVIKK 425 L V+K Sbjct: 419 GLDVLKP 425 >gi|77360652|ref|YP_340227.1| seryl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] gi|123588222|sp|Q3IH21|SYS_PSEHT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|76875563|emb|CAI86784.1| serine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 434 Score = 443 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 196/436 (44%), Positives = 273/436 (62%), Gaps = 12/436 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++RQ+ E L R E + +L+EK + L K ++++++RN+++ IGQ Sbjct: 1 MLDSKFLRQDIEQTAARLAARGYELDVATVTALEEKRKTLQVKTQELQSQRNASAKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G L + + L +L + ++ V +++ + IPN+P E VP G + Sbjct: 61 AKAKG--EDAQPLLDAVANLGSELDAAKAQQDVVLAAINDIALAIPNLPDESVPAGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I + G ++H ++G+ L +DF+ K+SGARF+V+ G +A + RAL Q Sbjct: 119 DNVEILTWGTPKKFDFDVKDHVDVGQDLNGLDFEMGVKISGARFTVMRGQVARMHRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----------TDGRWLIP 230 +M+D HT ++GYTE+ P LV ++YGT Q+PKFA D+F T G LIP Sbjct: 179 YMLDTHTDKNGYTEMYVPYLVNSASLYGTSQLPKFAGDLFHTLGLVNDDGEQQSGFSLIP 238 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV LTN EI + LP+R T P FRSEAGS GRDTRG++RQHQF K ELV + Sbjct: 239 TAEVPLTNSARDEIYDESDLPIRLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLV 298 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + EDS E + AE+IL+ L+L YR V LC GD+GF + KTYDLEVWL QN YREI Sbjct: 299 KPEDSMATLEELTGHAEQILQELELPYRKVILCMGDMGFGSAKTYDLEVWLPAQNTYREI 358 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS +FQ+RRM +R+R +K + HTLNGSG+AVGR L+AILENY ADGSV +P Sbjct: 359 SSCSNMADFQARRMQARFRREGAKKPELLHTLNGSGLAVGRTLVAILENYQQADGSVVVP 418 Query: 411 TVLRPYMNNLAVIKKE 426 VLRPYM L VI K+ Sbjct: 419 EVLRPYMGGLEVIGKQ 434 >gi|146311074|ref|YP_001176148.1| seryl-tRNA synthetase [Enterobacter sp. 638] gi|166987313|sp|A4W8R7|SYS_ENT38 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|145317950|gb|ABP60097.1| seryl-tRNA synthetase [Enterobacter sp. 638] Length = 430 Score = 443 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 268/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDQAKTELELLLAEIRDIALAIPNTPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G R+H +GE +DF A KL+GARF V+ G +AHL RAL Q Sbjct: 119 DNVEVKRWGTPREFDFEVRDHVTLGEMHAGLDFAAAVKLTGARFVVMKGQIAHLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEAESSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T +P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E M AE++L+ L L YR ++LCTGD+GF A KT+DLEVW+ QN YREISS Sbjct: 299 EVSMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGATKTFDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R R K + HTLNGSG+AVGR L+A++ENY ADG + IP V Sbjct: 359 CSNVGDFQARRMQARCRTKADKKTRLVHTLNGSGLAVGRALVAVMENYQQADGRIEIPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM I Sbjct: 419 LRPYMKGQQYI 429 >gi|149913919|ref|ZP_01902451.1| seryl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149812203|gb|EDM72034.1| seryl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 430 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 209/429 (48%), Positives = 278/429 (64%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D A+ +R LE S+ IL+LDE R I E +A +NS S +G Sbjct: 1 MHDIRAIRENPAAFDAAMARRGLEQASDEILALDEARRACIHAAETAQAEQNSASKDVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + D L+ S K ++ ++ E ++ L L+ +PN+PL+E+P G Sbjct: 61 AKARGDEAEFDRLRALVSDKKSEVARMQAEAKDLDQRLTDLLMGLPNLPLDEIPDGQDEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G S +EHFEI + MDF+ KLSGARF V+ G +A + RAL Q Sbjct: 121 DNVEIHRWGTPASFDFPPKEHFEIPGVIPGMDFEAGAKLSGARFVVMQGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G E P+LVR++ MYGTG +PKF +D + TT+G WL+PT+EV+LTNL Sbjct: 181 FMLDTHIEENGLLETWTPVLVREDMMYGTGNLPKFGEDSYQTTNGWWLVPTAEVTLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +E +LP R+ FRSEAGSAG+DT GMLRQHQF K E+VSIT + S E + Sbjct: 241 HGDTVEEATLPRRYAAHTQCFRSEAGSAGKDTAGMLRQHQFEKVEMVSITHPDHSRAELD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CA+ IL+RL L YR V LCTGD+GF A +T+D+EVWL GQN YREISS S CG FQ Sbjct: 301 RMTGCAQGILERLGLPYRTVVLCTGDMGFGARRTHDIEVWLPGQNTYREISSVSLCGEFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +R+R +F HTLNGSG+AVGRCLIA+LEN ADGSV +P VL PY+ Sbjct: 361 ARRMTARFRPAGGGKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVALPAVLHPYLGGR 420 Query: 421 AVIKKEHIL 429 +V++ + L Sbjct: 421 SVLQADGTL 429 >gi|153009670|ref|YP_001370885.1| seryl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] gi|151561558|gb|ABS15056.1| seryl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] Length = 442 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 257/426 (60%), Positives = 320/426 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR + S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 16 MLDIKWIRENPETLDKALAKRGAQSLSSELMALDEKRREYVGKVQAAQERRNAASKEIGK 75 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A + + D LK E + LK+ L E EE + L +S IPN+PLE+VP+G + Sbjct: 76 AMAAKDAATADKLKAEVAELKDFLAQAEDEERRLTKELNDALSTIPNIPLEDVPLGKDES 135 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG + + +EHFE+GEALG MDF+RA KL+G+RF+VL G LA LERALGQ Sbjct: 136 DNVEVRRVGNQRNFAFQPKEHFELGEALGYMDFERAAKLAGSRFTVLKGSLARLERALGQ 195 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGYTE PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 196 FMLDLHTMEHGYTETMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 255 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI+++KSLP R+T L P FRSEAGSAGRDTRGMLRQHQF K E+VSIT + S EHE Sbjct: 256 ADEIVDTKSLPQRYTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDADSSIAEHE 315 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAEE+LKRL L +R V LCTGD+GF A KTYD+EVWL GQN YREISSCS CG+FQ Sbjct: 316 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQKTYDIEVWLPGQNTYREISSCSVCGDFQ 375 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY DGS+ IP L+PYM L Sbjct: 376 GRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENYQEEDGSIHIPEALQPYMGGL 435 Query: 421 AVIKKE 426 I+K Sbjct: 436 TRIEKT 441 >gi|15605830|ref|NP_213207.1| seryl-tRNA synthetase [Aquifex aeolicus VF5] gi|3915066|sp|O66647|SYS_AQUAE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|2982982|gb|AAC06595.1| seryl-tRNA synthetase [Aquifex aeolicus VF5] Length = 425 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 206/429 (48%), Positives = 283/429 (65%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+DI IR+ P+++ L R E + +L LD++ R +IK++E +R+ RN S +I Sbjct: 1 MIDINLIREKPDYVKERLATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ EG + ++N LKE++ LE+E +V LK + IPN+P VP+G Sbjct: 61 GKLKREGKDT--TEIQNRVKELKEEIDRLEEELRKVEEELKNTLLWIPNLPHPSVPVGED 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ +R G+ + H+EIGE LG++DF R KLSG+RF+V+ G A LERAL Sbjct: 119 EKDNVEVRRWGEPRKFDFEPKPHWEIGERLGILDFKRGAKLSGSRFTVIAGWGARLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLT 237 FM+DLHT + GY E+ P LV+ E + GTGQ+PKF +D++ C D +LIPT+EV LT Sbjct: 179 INFMLDLHT-KKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKCERDNLYLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY EI++ ++LP+ T P +R EAG+ G+D RG++RQHQF K ELV I + S+ Sbjct: 238 NLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPDTSYD 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+++ AEE+L+ L L YRVV LCTGDLGFSA KTYD+EVW QN YREISSCS C Sbjct: 298 ELEKLVKDAEEVLQLLGLPYRVVELCTGDLGFSAAKTYDIEVWFPSQNKYREISSCSNCE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RRMN+R++D + +F HTLNGSG+AVGR L AILENY DGSV +P VLR Y+ Sbjct: 358 DFQARRMNTRFKDSKTGKNRFVHTLNGSGLAVGRTLAAILENYQQEDGSVVVPEVLRDYV 417 Query: 418 NNLAVIKKE 426 VI+ E Sbjct: 418 -GTDVIRPE 425 >gi|110634154|ref|YP_674362.1| seryl-tRNA synthetase [Mesorhizobium sp. BNC1] gi|123353591|sp|Q11HC8|SYS_MESSB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|110285138|gb|ABG63197.1| seryl-tRNA synthetase [Chelativorans sp. BNC1] Length = 431 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 254/432 (58%), Positives = 323/432 (74%), Gaps = 6/432 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-----SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI+WIR+N + L +AL+KR E E ++ DE R + K+++ + +RN+ S Sbjct: 1 MLDIRWIRENADALVLALRKRGQEEAAARSTVEEAIAADEARRTHLTKLQEAQEQRNAAS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+A+A G+ + LK E + LK + E +E + + L+ L++ IPN+PL++VP+ Sbjct: 61 KEIGKALAAGDKEKAERLKAEVAELKGFIQDGEAQERALDNRLRDLLARIPNIPLDDVPV 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G N+N+ IR VG+ ++EHFEIGEALGLMDF+RA KLSGARF+VLTG LA LE Sbjct: 121 GADENDNVEIRRVGEARQPN-WAKEHFEIGEALGLMDFERAAKLSGARFTVLTGTLARLE 179 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVS 235 RALGQFM+DLHT+EHGYTEV PLLVRDEA++GTGQ+PKF +D+F TTDGRW+IPT+EV Sbjct: 180 RALGQFMLDLHTTEHGYTEVQPPLLVRDEALFGTGQLPKFDEDLFRTTDGRWMIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTNL EI++ + LPLR+T L P FRSEAGSAGRDTRGMLRQHQF+K ELVSIT E + Sbjct: 240 LTNLVREEILDGEKLPLRYTALTPCFRSEAGSAGRDTRGMLRQHQFYKVELVSITDAESA 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EHERM +CAEE+LKRL L +R V LCTGD+GF A KTYD+EVWL GQ YREISSCS Sbjct: 300 LAEHERMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQKTYDIEVWLPGQKTYREISSCSV 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 CG+FQ+RRMN+RYR K +F HTLNGSGVAVGR LIA++ENY N DGS++IP +L+P Sbjct: 360 CGDFQARRMNARYRAAGDKQARFVHTLNGSGVAVGRALIAVMENYQNEDGSISIPEILQP 419 Query: 416 YMNNLAVIKKEH 427 YM L I+ Sbjct: 420 YMGGLKKIEARG 431 >gi|224582773|ref|YP_002636571.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254783044|sp|C0PXT0|SYS_SALPC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|224467300|gb|ACN45130.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 430 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S IGQ Sbjct: 1 MLDSNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDTLLAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|78043693|ref|YP_361479.1| seryl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|123770534|sp|Q3A8Q5|SYS_CARHZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|77995808|gb|ABB14707.1| seryl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 424 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 205/427 (48%), Positives = 279/427 (65%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +RQNPE + ALKKR + L LDE+ R L+ +E + +RN+ S +IG+ Sbjct: 1 MLDIKKVRQNPEIVVEALKKRGANLNLDEFLRLDEERRKLLVDVEQKKYKRNTVSEEIGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + D L E L +++ L+ E ++ L ++ IPN+P E VP+G ++ Sbjct: 61 LKKQGLPA--DDLILEMRALSDEIKKLDDEVAQIEEKLHAILLTIPNIPHESVPVGKDSS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + H+EIGE L ++DF R +K++GARF+ G A LERA+ Sbjct: 119 ENVEVRRWGEPRKFTFTPKAHWEIGEELDILDFARGSKVTGARFTFYKGLGAMLERAVIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHT EHGY EV P +V ++M GTGQ+PKFA+DMF +LIPT+EV +TNL Sbjct: 179 FMLDLHTREHGYVEVFPPFIVNADSMMGTGQLPKFAEDMFKLEGLNYYLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI++ LP+ + FR+EAG+AGRDTRG++RQHQF K ELV + E+S+ E Sbjct: 239 YREEILDGDKLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFVKPENSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AE +L+ L L YRVV LCTGDLGFSA KTYD+EVWL N Y+EISSCS +F Sbjct: 299 EKLTRDAERVLQLLGLPYRVVVLCTGDLGFSAAKTYDIEVWLPSYNDYKEISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR RY++ +F HTLNGSG+AVGR + AILENY N DGSVT+P VLRPYM Sbjct: 359 QARRAKIRYKEHPKAKPEFVHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEVLRPYM-G 417 Query: 420 LAVIKKE 426 + I K+ Sbjct: 418 VDRIYKK 424 >gi|194099100|ref|YP_002002185.1| seryl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|239999406|ref|ZP_04719330.1| seryl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|240017028|ref|ZP_04723568.1| seryl-tRNA synthetase [Neisseria gonorrhoeae FA6140] gi|240081336|ref|ZP_04725879.1| seryl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|240116105|ref|ZP_04730167.1| seryl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|240118389|ref|ZP_04732451.1| seryl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|240126134|ref|ZP_04739020.1| seryl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|240128611|ref|ZP_04741272.1| seryl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|260440085|ref|ZP_05793901.1| seryl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|268595226|ref|ZP_06129393.1| seryl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268597438|ref|ZP_06131605.1| seryl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268601771|ref|ZP_06135938.1| seryl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268604101|ref|ZP_06138268.1| seryl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268684720|ref|ZP_06151582.1| seryl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|268686999|ref|ZP_06153861.1| seryl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|291043373|ref|ZP_06569096.1| seryl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|238690216|sp|B4RN50|SYS_NEIG2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|193934390|gb|ACF30214.1| seryl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|268548615|gb|EEZ44033.1| seryl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268551226|gb|EEZ46245.1| seryl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268585902|gb|EEZ50578.1| seryl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268588232|gb|EEZ52908.1| seryl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268625004|gb|EEZ57404.1| seryl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|268627283|gb|EEZ59683.1| seryl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|291012979|gb|EFE04962.1| seryl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|317164654|gb|ADV08195.1| seryl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107] Length = 431 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 277/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPPGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSC Sbjct: 300 KSYGALEEMVGHAENILKALELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM + ++ + Sbjct: 419 QPYMGGVTKLEVK 431 >gi|84503428|ref|ZP_01001488.1| seryl-tRNA synthetase [Oceanicola batsensis HTCC2597] gi|84388215|gb|EAQ01167.1| seryl-tRNA synthetase [Oceanicola batsensis HTCC2597] Length = 429 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 209/429 (48%), Positives = 281/429 (65%), Gaps = 1/429 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP+ D AL +R + P S IL+LDEK R I E +A +N++S +IG+ Sbjct: 1 MHDIRAIRDNPDAFDAALARRGVSPLSSEILALDEKRRACIHAAESAQADQNASSKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ + K+++ ++ E + L ++ IPN+P ++VP G + Sbjct: 61 AKASGDEAEFERLRALVAAKKDEVARMQAEAKDWDRKLTDMLMGIPNLPHDDVPDGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G P EH+E+ MDF+ A KLSG+RF VL+G +A + RAL Q Sbjct: 121 DNAELRRHGTPPEFAFKPLEHYELPGVQEGMDFETAAKLSGSRFVVLSGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H SE+G TE P+LV++E MYGTGQ+PKF +D + T +G WL+PT+EV+LTN+ Sbjct: 181 FMLDTHVSENGLTETWTPVLVKEEMMYGTGQLPKFGEDSYRTREGWWLVPTAEVTLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I LP R+ FRSEAGSAGRDT GMLRQHQF K E+VSITR E+S E + Sbjct: 241 NDVMIADSYLPRRYVAHTQCFRSEAGSAGRDTAGMLRQHQFEKVEMVSITRPEESRAELD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE IL+RL L +R V LCTGD+GF A +T+D+EVWL GQN YREISS S CG+FQ Sbjct: 301 RMTDCAEGILRRLGLAFRTVVLCTGDMGFGARRTHDIEVWLPGQNAYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR K + HTLNGSG+AVGRCLIA+LEN DGSV +P L P++ Sbjct: 361 ARRMNARYRPEGGK-PDYVHTLNGSGLAVGRCLIAVLENGQCEDGSVALPEALHPWLGGK 419 Query: 421 AVIKKEHIL 429 + E L Sbjct: 420 TTLTAEGQL 428 >gi|304397062|ref|ZP_07378941.1| seryl-tRNA synthetase [Pantoea sp. aB] gi|304355211|gb|EFM19579.1| seryl-tRNA synthetase [Pantoea sp. aB] Length = 430 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 200/431 (46%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + E + SL+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGYKLDVETLRSLEERRKVLQVETENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E E+ + ++ +PN+P +EVP+G + Sbjct: 61 AKARG--EDIEPLRQEVNALGERLDAAKAELDELQNQIRDFALAMPNIPADEVPLGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN + G ++H E+GEA +DF A KL+G+RF V+ G +A L RAL Q Sbjct: 119 ENQEVSRWGTPREFSFQVKDHVELGEAAKGLDFAAAVKLTGSRFVVMQGQIARLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FMIDLHT +HGY E S P LV +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMIDLHTEQHGYLETSVPYLVNHATLYGTGQLPKFGEDLFHTRPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +LP++ T P FRSEAGS GRDTRG++R HQF K E+V I Sbjct: 239 EVPLTNLVRDEILEEDTLPVKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVTP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVWL QN YREISS Sbjct: 299 EQSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGATKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R R+ K + HTLNGSG+AVGR L+A+LENY DG + +P V Sbjct: 359 CSNMGDFQARRMQARCRNKQDKKPRLVHTLNGSGLAVGRTLVAVLENYQQEDGRIAVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM + +I Sbjct: 419 LRPYMKGVEII 429 >gi|320175334|gb|EFW50440.1| Seryl-tRNA synthetase [Shigella dysenteriae CDC 74-1112] Length = 430 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 270/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L K E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNRLEYI 429 >gi|296282871|ref|ZP_06860869.1| seryl-tRNA synthetase [Citromicrobium bathyomarinum JL354] Length = 427 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 229/428 (53%), Positives = 293/428 (68%), Gaps = 3/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI IR+ PE D AL +R EP + +L LD + R ++ +++D + RRN+ S IGQ Sbjct: 1 MHDIATIRREPEAFDAALARRGAEPVTARLLDLDTRRRAVLTELQDAQNRRNAASKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQ-LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ GN D LK E + LK LP LE++ + + + +++ IPN+P E+VP G Sbjct: 61 AMGSGNTEEADRLKAEVTELKATTLPRLEEDARVLGAEMDDMLAAIPNLPAEDVPEGAGE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + + G+K REH +IG LG +DF+ ++GARF+ L G +A L RALG Sbjct: 121 EENVELSTWGEKREFDFEPREHADIGPMLG-LDFEIGANIAGARFTFLRGGIARLHRALG 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 QFM+D +E+GY E + PLLVRD+A++GTGQ+PKFADD+F TTDGRWLIPT+EVSLTN Sbjct: 180 QFMLDRQVTENGYLECNPPLLVRDDAVFGTGQLPKFADDLFHTTDGRWLIPTAEVSLTNA 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 IIE LPLR T L P FRSEAG+AG+DTRG +RQHQF K ELVSI R EDS EH Sbjct: 240 VRGHIIEEAHLPLRMTALTPCFRSEAGAAGKDTRGFIRQHQFEKVELVSIVRPEDSEAEH 299 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ERM CAE +L+ L L YR + LCTGD+GF A KTYDLEVWL GQ YREISSCS G+F Sbjct: 300 ERMTQCAEGVLQALGLPYRKMLLCTGDMGFGARKTYDLEVWLPGQGAYREISSCSNVGDF 359 Query: 360 QSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RRM++RYR + K +F HTLNGSG+AVGR L+A+LENY + DGS+ +P L PYM Sbjct: 360 QARRMSARYRPESGDKKTEFVHTLNGSGLAVGRTLVAVLENYQSEDGSIDVPEALHPYMG 419 Query: 419 NLAVIKKE 426 L I E Sbjct: 420 GLTRISPE 427 >gi|87122208|ref|ZP_01078091.1| seryl-tRNA synthetase [Marinomonas sp. MED121] gi|86162528|gb|EAQ63810.1| seryl-tRNA synthetase [Marinomonas sp. MED121] Length = 435 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 196/430 (45%), Positives = 274/430 (63%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +R +PE + + LKK+ E + L+E+ + + + E+++ RNS S +IG Sbjct: 1 MLDIKALRADPEAVALRLKKKGFELDVATFIGLEERRKSIQVETENLQQSRNSVSKEIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ G+ LK +T++L + L +++ V + +++ IPN+P E VP G + + Sbjct: 61 AMKSGDKDKAAELKAQTASLGDDLANAKEQLSLVQHEMDLILASIPNIPHESVPEGATED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI IR G ++H +IGE L +DF+ A K++G+RF+V+ LA L RAL Q Sbjct: 121 DNIEIRRWGDVREFSFEPKDHVDIGETLEQLDFEAAVKITGSRFAVMRQDLARLHRALTQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------TDGRWLIPTSE 233 FMI+ H +HGYTEV P LV + ++ GTGQ+PKF D+F + +LIPT+E Sbjct: 181 FMINTHADQHGYTEVYVPYLVNEHSLKGTGQLPKFEADLFKVPVDKESGNNDLYLIPTAE 240 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL EI+ L ++ P FRSEAGS GRDTRGM+RQHQF K ELV + R + Sbjct: 241 VPVTNLVRDEILNDAELHKKYVAHTPCFRSEAGSYGRDTRGMIRQHQFEKVELVHVCRPD 300 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E +++ AE ILK+L+L YR V LC GDLGFSA KTYD+EVWL GQ YREISSC Sbjct: 301 RSEQVLEELITDAEAILKKLNLPYRTVILCGGDLGFSAHKTYDIEVWLPGQGKYREISSC 360 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY N DGSV +P VL Sbjct: 361 SNMGDFQARRMQARWRNPETGRPELAHTLNGSGLAVGRTLVAVLENYQNEDGSVNVPDVL 420 Query: 414 RPYMNNLAVI 423 PYM + Sbjct: 421 IPYMGGKTKL 430 >gi|296445300|ref|ZP_06887259.1| seryl-tRNA synthetase [Methylosinus trichosporium OB3b] gi|296257255|gb|EFH04323.1| seryl-tRNA synthetase [Methylosinus trichosporium OB3b] Length = 440 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 244/440 (55%), Positives = 305/440 (69%), Gaps = 13/440 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR N D ++R+L P S+ +L+LD+ R I ++ + RRN+ S +IG Sbjct: 1 MYDIKWIRDNAAAFDEGRRRRNLAPLSDSLLALDDSRRAAIGVLQAAQERRNAASKEIGL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ E + + +ALK E + LKE P LE+ E E ++L K +S IPN PLE+VP G N Sbjct: 61 AMREKDAARAEALKAEVAKLKEDFPQLEQREREASAALDKALSEIPNTPLEQVPEGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G+ + +EHF+IGE L LMDF+ ATKLSGARF V G +A LERAL Q Sbjct: 121 ENVEVLRWGEPRNFDFPPKEHFDIGEGLRLMDFESATKLSGARFVVNKGPMARLERALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------------TDGRW 227 FM+DLHT +HGY EV+ PLLVRD+AM+GT Q+PKF DD F T W Sbjct: 181 FMLDLHTDQHGYAEVAPPLLVRDDAMFGTAQLPKFRDDQFSVSAGRPSGDDPASETSDYW 240 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LIPT+EV LTNL I++ LPLRFT FR+EAG+AGRDTRGM+RQHQF+K ELV Sbjct: 241 LIPTAEVPLTNLVRESILDESQLPLRFTAGTYCFRAEAGAAGRDTRGMIRQHQFYKVELV 300 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 SIT E S EHERM CAE++L+ L+L YR V+LCTGD+GF++ KTYDLEVWL GQ Y Sbjct: 301 SITTPEKSLEEHERMTGCAEKVLQLLELPYRKVTLCTGDMGFASQKTYDLEVWLPGQGKY 360 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 REISSCS CG+FQ+RRMN+RYR +SK+ +F HTLNGSGVAVGR L+A+LENY ADGSV Sbjct: 361 REISSCSVCGDFQARRMNARYRPADSKATRFVHTLNGSGVAVGRALVAVLENYQEADGSV 420 Query: 408 TIPTVLRPYMNNLAVIKKEH 427 T+P VLRPYM L I K Sbjct: 421 TVPKVLRPYMGGLEKIAKAG 440 >gi|322832176|ref|YP_004212203.1| seryl-tRNA synthetase [Rahnella sp. Y9602] gi|321167377|gb|ADW73076.1| seryl-tRNA synthetase [Rahnella sp. Y9602] Length = 430 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 203/431 (47%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + E + S +E+ ++L + E ++A RNS S IGQ Sbjct: 1 MLDPNLLRNELDAVAEKLARRGFKLDVETLRSQEERRKVLQVETETLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E +TL E+L + E + + ++ + S IPN+P + VP G N Sbjct: 61 AKARG--EDIEPLRLEVNTLGEKLDAAKAELDALQNDIRDIASAIPNMPDDSVPAGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + G R+H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNQEVSRWGTPRQYDFTVRDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV E +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYLETYVPYLVNQETLYGTGQLPKFGEDLFHTKPLDEEAGSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLTRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVWL Q+ YREISS Sbjct: 299 EDSMDALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R R+ K + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMGDFQARRMQARCRNKTDKKPRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLEYI 429 >gi|85372949|ref|YP_457011.1| seryl-tRNA synthetase [Erythrobacter litoralis HTCC2594] gi|122545406|sp|Q2NDM7|SYS_ERYLH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|84786032|gb|ABC62214.1| SerS, seryl-tRNA synthetase [Erythrobacter litoralis HTCC2594] Length = 426 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 234/426 (54%), Positives = 298/426 (69%), Gaps = 1/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NPE D AL +R EP + IL+LDE+ R + K+++ ++RRN S IGQ Sbjct: 1 MHDIRQIRDNPEAFDAALARRGHEPVAAEILALDEQCRAVTTKMQEAQSRRNEASKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ +GN +ALK E + LK+ LP LE E+ E+ L+ ++ IPN+PL++VP G + Sbjct: 61 AMGQGNTEKAEALKAEVADLKQTLPRLEDEDRELKMRLENALAVIPNLPLDDVPDGADES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI + + G K REH +IG ALG MDF+ +LSGARF+ L G +A L RALGQ Sbjct: 121 DNIEVGTWGTKREFSFEPREHADIGPALG-MDFETGARLSGARFTFLRGGMARLHRALGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D SE+GY E + P+LVRDEAMYGT ++PKFA+D F TTDGRWLIPT+EVSLT Sbjct: 180 FMLDRQVSEYGYAECAPPVLVRDEAMYGTDKLPKFAEDSFQTTDGRWLIPTAEVSLTASV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +I++ +LP+R T L P FRSEAG+AG+DTRG +RQHQF KCELVSI R E+S EHE Sbjct: 240 MDQILDDAALPMRLTALTPCFRSEAGAAGKDTRGFIRQHQFEKCELVSIVRPENSAAEHE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM AE +L+ LDL YR + LCTGD+GF A KTYDLEVWL GQ YREISSCS G+FQ Sbjct: 300 RMTEAAESVLQALDLPYRKMLLCTGDMGFGARKTYDLEVWLPGQGAYREISSCSNTGDFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR K F HTLNGSG+AVGR L+A++ENY DGSV +P VL PYM Sbjct: 360 ARRMNARYRPEGEKKTAFVHTLNGSGLAVGRTLVAVIENYQEEDGSVAVPEVLAPYMGGA 419 Query: 421 AVIKKE 426 ++ Sbjct: 420 MKLEPT 425 >gi|167629223|ref|YP_001679722.1| seryl-tRNA synthetase [Heliobacterium modesticaldum Ice1] gi|238687865|sp|B0TAQ9|SYS_HELMI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|167591963|gb|ABZ83711.1| seryl-tRNA synthetase [Heliobacterium modesticaldum Ice1] Length = 422 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 197/424 (46%), Positives = 271/424 (63%), Gaps = 5/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R NPE + AL+KR + L LD + R L+ ++E ++A+RN+ SA+I + Sbjct: 1 MLDTKFVRANPEAVQEALQKRGANISLDDFLELDRRRRALVVEVESLKAKRNAVSAEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +AL E + +Q+ L+ E + + + IPN+P VP+GTS Sbjct: 61 RKKA--KEDAEALIAEMRQVGDQIKALDDELTRIELDMDNRMLYIPNIPHASVPVGTSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + + H++IGE L ++DF R K+SGARF+V G A LERA+ Sbjct: 119 DNVEVRRWGTPRTFDFPVKAHWDIGEDLNILDFQRGAKISGARFTVYKGLGARLERAVIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 M+D H + GYTEV P LV ++M GTGQ+PKFA+DMF +LIPT+EV +TNL Sbjct: 179 LMMDTHA-QRGYTEVLPPYLVNRQSMLGTGQLPKFAEDMFAVAGTDYYLIPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y++EI+++ LP+ + FR+EAG+AGRDTRG++RQHQF K ELV TR E+S+ E Sbjct: 238 YTNEILDADKLPIHHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPENSYDEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AE IL+ L L YRV++LCTGD+GFSA KTYD+EVWL YREISSCS +F Sbjct: 298 EKLTKDAEHILQLLGLPYRVITLCTGDMGFSAAKTYDIEVWLPSFGAYREISSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSG+AVGR + AILEN DGSV IP LRPYM Sbjct: 358 QARRANIRFRPSPKAKPEFVHTLNGSGLAVGRTVAAILENCQQPDGSVVIPEALRPYM-G 416 Query: 420 LAVI 423 + VI Sbjct: 417 VDVI 420 >gi|317491441|ref|ZP_07949877.1| seryl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920988|gb|EFV42311.1| seryl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 430 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 268/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + + + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRNELDAVAEKLARRGFKLDVDTLRQQEERRKVLQVETESLQAERNSRSKSIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNELGEKLDAAKSELDQLLNDIRDLALSIPNMPDDSVPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ + R+H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGEPRTYDFDVRDHVTLGEMTGGLDFAAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV + +YGTGQ+PKF D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYLETYVPYLVNHDTLYGTGQLPKFGGDLFHTRPLEEEADSSTYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI+E +SLPL+ T P FRSEAGS GRDTRG++R HQF K ELV I R Sbjct: 239 EVPVTNLVRGEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ QN YREISS Sbjct: 299 EDSMDALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSSKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R+ K + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRNKTDKKPRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|323141849|ref|ZP_08076713.1| serine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] gi|322413689|gb|EFY04544.1| serine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] Length = 426 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 191/425 (44%), Positives = 272/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+NP+ ++ A+K R+ L LD++ R + +++E ++ RN+ S +IG+ Sbjct: 1 MLDLKFVRENPKLVEEAVKSRNGSLDLTEFLELDKQRREITQQVEALKKERNTASQEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L +++ +KE E+ +K ++ IPNVP E+VP+G Sbjct: 61 LKKAGQ--DAAEQMAAVRALGDKIAADDKELKEIEEKIKSILLTIPNVPAEDVPVGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +IR+ G+ + H++IGE LG++DF+R K+SGAR+ G + LERA+ Sbjct: 119 CNPVIRTWGEPTKFDFEPKAHWDIGENLGILDFERGVKVSGARYVFYRGMGSRLERAVIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 F +D+HT +HGYTE P +V +M GTGQ+PKFA+DM+ +LIPT+EV +TN Sbjct: 179 FFLDVHTRKHGYTEFFPPFIVNGASMQGTGQLPKFAEDMYKLENGDMYLIPTAEVPVTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + +I+ LPL++T + FR+EAG+AGRDTRG++R HQF K ELV T+ E+S+ E Sbjct: 239 HRDDILTGDELPLKYTAYSACFRAEAGAAGRDTRGLIRMHQFNKVELVKFTKPEESWAEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++ + AEE+L+ L L Y VV LCTGDLGFS+ TYDLEVWL N YREISSCS +F Sbjct: 299 DKLTNDAEEVLQLLGLPYHVVRLCTGDLGFSSATTYDLEVWLPAANCYREISSCSNFLDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSGVAVGR + AILENY ADGSV +P VLRPYM Sbjct: 359 QARRANIRFRRDAKSKPEFVHTLNGSGVAVGRTVAAILENYQQADGSVVVPEVLRPYM-G 417 Query: 420 LAVIK 424 VI Sbjct: 418 CDVIP 422 >gi|268590183|ref|ZP_06124404.1| serine--tRNA ligase [Providencia rettgeri DSM 1131] gi|291314463|gb|EFE54916.1| serine--tRNA ligase [Providencia rettgeri DSM 1131] Length = 430 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 194/431 (45%), Positives = 265/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R E + L+E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRTELDAVAEKLARRGFTLDVEKLRELEERRKVLQVETETLQADRNSRSKTIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ ++ + IPN+P ++VP G + Sbjct: 61 AKARG--EDIEPLRLEVNQLGEKLDSAKAELDKLQQEIRDIALSIPNIPDDQVPDGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ ++H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNVEVARWGEPRQYDFEVKDHVSLGELSGGLDFPAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E+ P LV + +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYQELYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEEEADSSTYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI++ SLPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 239 EVPVTNLVRDEILDEDSLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVHP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL QN YREISS Sbjct: 299 EKSMDALEELTGHAEKVLQLLNLPYRKVILCTGDIGFGSRKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R+R + K + HTLNGSG+AVGR L+AILENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARFRGKSDKKTQLVHTLNGSGLAVGRTLVAILENYQLADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMKGLEFI 429 >gi|148981577|ref|ZP_01816464.1| seryl-tRNA synthetase [Vibrionales bacterium SWAT-3] gi|145960820|gb|EDK26154.1| seryl-tRNA synthetase [Vibrionales bacterium SWAT-3] Length = 435 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 195/434 (44%), Positives = 264/434 (60%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R E I L+EK + L K E+++A RNS S IGQ Sbjct: 1 MLDSKLLRAELDETAAKLARRGFALDVETIRELEEKRKSLQMKTEELQALRNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + E L +L + E+ S L+ + IPN+P E VP G + Sbjct: 61 AKAKGDDEEAERILAEVGNLGAELDQAKAALAELQSDLETITMSIPNLPDESVPEGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ + ++H ++GE G +DF A K+SG+RF V+ G A L RA+ Q Sbjct: 121 DNVEVSRWGQPKTYDFEVKDHVDLGEMSGGLDFASAVKISGSRFIVMKGKFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 FM+DLHT EHGYTE+ P LV +++YGTGQ+PKF +D+F T+ LI Sbjct: 181 FMLDLHTDEHGYTEMYVPYLVNHDSLYGTGQLPKFGEDLFHTSPLTEQVSDVPLKTLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMVRDTITDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGAAKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+PYM + I Sbjct: 421 PAVLQPYMGGVTHI 434 >gi|332971217|gb|EGK10180.1| serine--tRNA ligase [Desmospora sp. 8437] Length = 432 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 182/427 (42%), Positives = 270/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQ+ E + L+ R + + ++ LDE+ R L+++ E ++ RRN S ++ Sbjct: 7 MLDLKVLRQDLEQVRKRLEHRGEDISGLDSVIRLDERRRELLRETEQLKNRRNVVSKEVA 66 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q G E + +++ L++E +V L ++ +PN+P E VP+G S Sbjct: 67 QKKKAG--EEAADTIAEMRRVGDRIKELDEEVRQVERELDHVLLTLPNLPHESVPVGESE 124 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N +R G+ P + H+E+ L ++DF+RA K++G+RF G A LERAL Sbjct: 125 EDNQPVRHWGEVPRWSFEPKPHWELATELDILDFERAAKVTGSRFVFYKGAGARLERALF 184 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 +M+DLHT ++GYTE+ P +V ++M GTGQ+PKFA+D F +LIPT+EV +TN Sbjct: 185 NYMLDLHTEKNGYTEMIPPYMVNRDSMTGTGQLPKFAEDSFAVADTDYYLIPTAEVPVTN 244 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ + LP+++ + +FRSEAGSAGRDTRG++R HQF K ELV + + EDS+ E Sbjct: 245 FHRGEILSAAELPVKYAGFSANFRSEAGSAGRDTRGLIRTHQFNKVELVKLVKPEDSYDE 304 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E ++ AE +L++L L YRV+ +CT DLGF+A K YDLEVWL YREISSCS + Sbjct: 305 LESLVQDAEMVLQQLGLPYRVLLMCTADLGFTAAKKYDLEVWLPSSGTYREISSCSNFED 364 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR N R+R +F HTLNGSG+A+GR + A+LE+Y DGS+ IP VLRPYM Sbjct: 365 YQARRANIRFRRDAGSKPEFVHTLNGSGLAIGRTVAALLEHYQQEDGSIRIPEVLRPYMG 424 Query: 419 NLAVIKK 425 L I+K Sbjct: 425 GLEKIEK 431 >gi|119470154|ref|ZP_01612920.1| seryl-tRNA synthetase [Alteromonadales bacterium TW-7] gi|119446575|gb|EAW27849.1| seryl-tRNA synthetase [Alteromonadales bacterium TW-7] Length = 434 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 198/435 (45%), Positives = 272/435 (62%), Gaps = 12/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++RQ+ E L R E + L+E+ + L K ++++++RN+++ IGQ Sbjct: 1 MLDSKYLRQDVEQTAARLAARGYELDVAKVTELEEQRKTLQVKTQELQSQRNASAKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G L + + L +L +K + EV +++ + IPN+P E VP G + Sbjct: 61 AKAKG--EDAQPLLDAVANLGSELDATKKAQDEVLNAINDIALAIPNLPDESVPEGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I + G ++H ++G+ L +DF+ K+SGARF+V+ G +A + RAL Q Sbjct: 119 DNVEILTWGTPKKYDFEVKDHVDVGQDLNGLDFEMGVKISGARFTVMRGQVARMHRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----------TDGRWLIP 230 +M+D HT +GYTE+ P LV ++YGT Q+PKFA D+F T G LIP Sbjct: 179 YMLDTHTDTNGYTEMYVPYLVNSASLYGTSQLPKFAGDLFHTLGLVNDDGEQQAGFSLIP 238 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV LTN S EI + LP+R T P FRSEAGS GRDTRG++RQHQF K ELV + Sbjct: 239 TAEVPLTNSASDEIYDESDLPIRLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLV 298 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + EDS E + AE+IL+ L+L YR V LC GD+GF A KTYDLEVWL Q+ YREI Sbjct: 299 KPEDSMQALEELTGHAEQILQALELPYRKVILCMGDMGFGAAKTYDLEVWLPAQDTYREI 358 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS +FQ+RRM +R+R +K + HTLNGSG+AVGR L+AILENY ADGSV +P Sbjct: 359 SSCSNMVDFQARRMQARFRREGAKKPELLHTLNGSGLAVGRTLVAILENYQQADGSVVVP 418 Query: 411 TVLRPYMNNLAVIKK 425 VLRPYM L VI K Sbjct: 419 EVLRPYMGGLEVIGK 433 >gi|114320852|ref|YP_742535.1| seryl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] gi|122311524|sp|Q0A7Z2|SYS_ALHEH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|114227246|gb|ABI57045.1| seryl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] Length = 424 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 207/426 (48%), Positives = 275/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +RQ+PE + AL +R + +LDE+ R L + ++++ RN+ S IGQ Sbjct: 1 MLDTRKLRQDPEGVARALARRGYRLDVAHYRALDERRRELQVRTQELQNERNTRSKGIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ LK E + L QL + E V L + +PN+P +VP G + Sbjct: 61 AKARG--EDIEPLKAEVADLGRQLEAAKGELQAVQDELHDIHVGMPNLPHPDVPEGEDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEA-LGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G P R+H E+GE G +DF+ A KL+GARF V+ G +A L RAL Sbjct: 119 ENVEVRRWGTPPEFGFRPRDHVELGELLDGGLDFEAAAKLTGARFVVMRGAVARLHRALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLT 237 QFM+D HT+EHGY E+ P +V ++++GTGQ+PKFA D+F +LIPT+EV +T Sbjct: 179 QFMLDTHTAEHGYQEIYVPYMVNRDSLFGTGQLPKFAADLFHLDAEQDYYLIPTAEVPVT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+ EII LPL+F P FRSEAGS G+DTRGM+RQHQF K ELV + R E S+ Sbjct: 239 NMARDEIIADGQLPLKFACHTPCFRSEAGSHGKDTRGMIRQHQFEKVELVQMVRPEASWE 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E + AE IL+RLDL YRVV+LCTGDLGFS+ KTYD+EVWL Q YREISSCS Sbjct: 299 ALEALTGHAETILQRLDLPYRVVTLCTGDLGFSSAKTYDIEVWLPAQETYREISSCSNFL 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RRM +R+R+P + + HTLNGSG+AVGRCL+AILENY ADG VT+P LRPYM Sbjct: 359 DFQARRMQARWRNPETGKPEPLHTLNGSGLAVGRCLVAILENYQEADGRVTVPEALRPYM 418 Query: 418 NNLAVI 423 + + Sbjct: 419 GGITRL 424 >gi|240113545|ref|ZP_04728035.1| seryl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|268599610|ref|ZP_06133777.1| seryl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|268583741|gb|EEZ48417.1| seryl-tRNA synthetase [Neisseria gonorrhoeae MS11] Length = 431 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 203/433 (46%), Positives = 277/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYEFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPPGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSC Sbjct: 300 KSYGALEEMVGHAENILKALELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM + ++ + Sbjct: 419 QPYMGGVTKLEVK 431 >gi|59801685|ref|YP_208397.1| seryl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] gi|240014583|ref|ZP_04721496.1| seryl-tRNA synthetase [Neisseria gonorrhoeae DGI18] gi|240121105|ref|ZP_04734067.1| seryl-tRNA synthetase [Neisseria gonorrhoeae PID24-1] gi|240123934|ref|ZP_04736890.1| seryl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|254494125|ref|ZP_05107296.1| seryl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268682559|ref|ZP_06149421.1| seryl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|67461600|sp|Q5F752|SYS_NEIG1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|59718580|gb|AAW89985.1| putative seryl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] gi|226513165|gb|EEH62510.1| seryl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268622843|gb|EEZ55243.1| seryl-tRNA synthetase [Neisseria gonorrhoeae PID332] Length = 431 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 201/433 (46%), Positives = 276/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPPGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D H +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHMLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSC Sbjct: 300 KSYGALEEMVGHAENILKALELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM + ++ + Sbjct: 419 QPYMGGVTKLEVK 431 >gi|152989408|ref|YP_001347960.1| seryl-tRNA synthetase [Pseudomonas aeruginosa PA7] gi|166223270|sp|A6V4H5|SYS_PSEA7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|150964566|gb|ABR86591.1| seryl-tRNA synthetase [Pseudomonas aeruginosa PA7] Length = 426 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 193/427 (45%), Positives = 276/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R P+ + L R + I +L+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDPKLVRTQPQEVAARLATRGFQLDVARIEALEEQRKSVQTRTEQLQAERNARSKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L +++ + L ++ IPN+P E VP+G + Sbjct: 61 AKQRG--EDIAPLLADVDRMGSELEEGKRQLDAIQGELDSMLLGIPNLPHESVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF+++ G +A L RAL Q Sbjct: 119 ANVEVRRWGMPKTFDFEVKDHVALGERHGWLDFETAAKLSGARFALMRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSL 236 FMI+LHT+EHGY E P LV+ A+ GTGQ+PKF +D+F +LIPT+EVSL Sbjct: 179 FMINLHTAEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIGRDGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S +I++++ LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I S+ Sbjct: 239 TNIVSGQILDARQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVDPATSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV++LCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAERVLQLLELPYRVLALCTGDMGFGATKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +RYR+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPDVLKPY 418 Query: 417 MNNLAVI 423 M + VI Sbjct: 419 MGGIEVI 425 >gi|315179812|gb|ADT86726.1| seryl-tRNA synthetase [Vibrio furnissii NCTC 11218] Length = 435 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 189/434 (43%), Positives = 266/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R E L +R + + I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELEETAAKLARRGFKLDVDTIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +++G+ + +K + TL + L + E V S L + +PN+P + VP G N Sbjct: 61 LMSQGDKDGAEEVKKQIGTLGDDLDAKKVELDAVMSQLDAITQSVPNLPDDAVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G + ++H ++GE +DF ATK++GARF ++ G A L RA+ Q Sbjct: 121 DNVEVSRWGTPKAYDFDVKDHVDLGEMGDGLDFASATKITGARFVIMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE+ P LV + ++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEQHGYTELYVPYLVNSDTLFGTGQLPKFGKDLFHTEPLAEKASDEEPRRLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I E LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTITEEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILENY ADG + + Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQQADGRIEV 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM + I Sbjct: 421 PAVLQKYMGGVTHI 434 >gi|229520458|ref|ZP_04409883.1| seryl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|262402530|ref|ZP_06079091.1| seryl-tRNA synthetase [Vibrio sp. RC586] gi|229342556|gb|EEO07549.1| seryl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|262351312|gb|EEZ00445.1| seryl-tRNA synthetase [Vibrio sp. RC586] Length = 435 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 195/434 (44%), Positives = 268/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +A+K + TL + L + E V + L + +PN+P + VP G + Sbjct: 61 LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G + ++H ++GE +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE+ P LV E ++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 TR EDS E + AE++L+ LDL YR V LCTGD+GF +CKTYDLEVW+ Q YRE Sbjct: 301 TRPEDSMAALEELTGHAEKVLQLLDLPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILENY ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM L I Sbjct: 421 PAVLQKYMGGLTHI 434 >gi|71906935|ref|YP_284522.1| seryl-tRNA synthetase [Dechloromonas aromatica RCB] gi|123627807|sp|Q47GH9|SYS_DECAR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|71846556|gb|AAZ46052.1| seryl-tRNA synthetase [Dechloromonas aromatica RCB] Length = 427 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 203/427 (47%), Positives = 277/427 (64%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + + L KR +L+ + + L + +D++A+RNS S QIG Sbjct: 1 MLDIQQLRSNLDAVAEGLAKRGKPIDFSEFSALEAERKTLQTRTQDLQAQRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + + ++ ++L E E+ + +++ +PN+P + VP+G+ Sbjct: 61 LKGKG--EDASEVMAQVGSIGDELKASEARLAELLTQFNAILAALPNIPDDSVPVGSDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ I+ G ++H ++GEALG +DF A K+SGARFS+L G LA L RAL Q Sbjct: 119 GNVEIKRWGTPRVFDFEVKDHTDVGEALGQLDFGTAAKISGARFSLLKGGLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSL 236 FM+D HT+EHGYTE+ AP LV ++YGTGQ+PKF +D+F D +LIPT+EV + Sbjct: 179 FMLDTHTAEHGYTELYAPYLVNAASLYGTGQLPKFEEDLFKVLRGDQDPLYLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EI+ +++LPL+F P FRSEAGS GRD RGM+RQHQF K ELV + E S Sbjct: 239 TNIVRDEILSAEALPLKFVCHTPCFRSEAGSGGRDVRGMIRQHQFDKVELVQVVHPEKSA 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE + AE IL++L+L YR ++LC+GD+GFSA KTYDLEVWL QN YREISSCS Sbjct: 299 EAHEELTRQAEIILEKLELPYRRMALCSGDMGFSAAKTYDLEVWLPAQNTYREISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G FQ+RRM +R+R+ + + HTLNGSG+AVGR L+AILEN NADGSVTIP VLRPY Sbjct: 359 GAFQARRMQARFRN-DKNKTELCHTLNGSGLAVGRTLVAILENNQNADGSVTIPAVLRPY 417 Query: 417 MNNLAVI 423 M L V+ Sbjct: 418 MGGLEVL 424 >gi|260459791|ref|ZP_05808045.1| seryl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] gi|259034593|gb|EEW35850.1| seryl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] Length = 434 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 237/434 (54%), Positives = 309/434 (71%), Gaps = 8/434 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-----SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI+WIR NP+ L AL KR + ++++DE R + +++ + RRN+ S Sbjct: 1 MLDIKWIRDNPKALVEALVKRSWSAAEAQSTVDELIAMDEARREHVTELQTSQERRNAAS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG A+ G+ +L + LK E +K + E E E+ +L ++ +PNVP ++VP+ Sbjct: 61 KEIGNAMRSGDAALAERLKAEVGEIKTFIQNGEARERELDKALNDALAVLPNVPFDDVPV 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G ++N++ VG+ P+ + +EHFEIGEALG+MDF+RA KLSG+RF+VL LA +E Sbjct: 121 GKDEHDNVVKHIVGEVPTRRNWVKEHFEIGEALGMMDFERAAKLSGSRFTVLKSGLARME 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTS 232 RA+GQFM+DLHT+EHGY E+ PL+VRDE ++GT Q+PKF +D+F T LIPT+ Sbjct: 181 RAIGQFMLDLHTNEHGYEEIIPPLMVRDEVLFGTNQLPKFEEDLFFTQHGDGRLGLIPTA 240 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI + LPLR+T L P FRSEAGSAGRDTRGMLRQHQF+K ELVSIT + Sbjct: 241 EVPLTNLVREEITAHEKLPLRYTALTPCFRSEAGSAGRDTRGMLRQHQFYKVELVSITDQ 300 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S EHERM CAEE+LKRL L +R + LCTGD+GF A KTYD+EVWL GQN YREISS Sbjct: 301 ESSLAEHERMTQCAEEVLKRLGLPFRTMVLCTGDMGFGARKTYDIEVWLPGQNAYREISS 360 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS CG+FQ+RRM++RY+D + K +F HTLNGSG AVGR LIA++ENY N DGSVTIP V Sbjct: 361 CSVCGDFQARRMDARYKDKDGKGNRFVHTLNGSGTAVGRALIAVIENYQNEDGSVTIPEV 420 Query: 413 LRPYMNNLAVIKKE 426 LRPYM L I+ + Sbjct: 421 LRPYMGGLEKIESK 434 >gi|153802126|ref|ZP_01956712.1| seryl-tRNA synthetase [Vibrio cholerae MZO-3] gi|124122319|gb|EAY41062.1| seryl-tRNA synthetase [Vibrio cholerae MZO-3] Length = 435 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 194/434 (44%), Positives = 268/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +A+K + TL + L + E V + L + +PN+P + VP G + Sbjct: 61 LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G + ++H ++GE +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE+ P LV E ++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTILDETELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 TR EDS E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ Q YRE Sbjct: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILENY ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM L I Sbjct: 421 PAVLQKYMGGLTHI 434 >gi|261344310|ref|ZP_05971954.1| serine--tRNA ligase [Providencia rustigianii DSM 4541] gi|282567914|gb|EFB73449.1| serine--tRNA ligase [Providencia rustigianii DSM 4541] Length = 430 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 193/431 (44%), Positives = 266/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R E + L+E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRTELDAVATKLARRGFTLDVEKLRELEERRKVLQVETETLQADRNSRSKTIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ ++ + IPN+P ++VP G + Sbjct: 61 AKARG--EDIEPLRLEVNQLGEKLDTAKAELEKLQQEIRDIALSIPNIPDDQVPDGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ ++H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNVEVARWGEPRQYDFEVKDHVSLGELAGGLDFPAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E+ P LV + +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYQELYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEEEADSSTYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI++ +LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 239 EVPVTNLVRDEILDEDALPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVHP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL QN YREISS Sbjct: 299 EKSMEALEELTGHAEKVLQLLELPYRKVILCTGDIGFGSRKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R+R + K + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARFRGKSDKKTQLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|15641123|ref|NP_230755.1| seryl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591279|ref|ZP_01678574.1| seryl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121726249|ref|ZP_01679539.1| seryl-tRNA synthetase [Vibrio cholerae V52] gi|147674801|ref|YP_001216578.1| seryl-tRNA synthetase [Vibrio cholerae O395] gi|153213559|ref|ZP_01948849.1| seryl-tRNA synthetase [Vibrio cholerae 1587] gi|153816911|ref|ZP_01969578.1| seryl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|153823886|ref|ZP_01976553.1| seryl-tRNA synthetase [Vibrio cholerae B33] gi|153824956|ref|ZP_01977623.1| seryl-tRNA synthetase [Vibrio cholerae MZO-2] gi|153828114|ref|ZP_01980781.1| seryl-tRNA synthetase [Vibrio cholerae 623-39] gi|227081283|ref|YP_002809834.1| seryl-tRNA synthetase [Vibrio cholerae M66-2] gi|229505295|ref|ZP_04394805.1| seryl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229511035|ref|ZP_04400514.1| seryl-tRNA synthetase [Vibrio cholerae B33] gi|229515492|ref|ZP_04404951.1| seryl-tRNA synthetase [Vibrio cholerae TMA 21] gi|229518156|ref|ZP_04407600.1| seryl-tRNA synthetase [Vibrio cholerae RC9] gi|229525721|ref|ZP_04415126.1| seryl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229529801|ref|ZP_04419191.1| seryl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|229608314|ref|YP_002878962.1| seryl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254225503|ref|ZP_04919113.1| seryl-tRNA synthetase [Vibrio cholerae V51] gi|254848239|ref|ZP_05237589.1| seryl-tRNA synthetase [Vibrio cholerae MO10] gi|255745522|ref|ZP_05419470.1| seryl-tRNA synthetase [Vibrio cholera CIRS 101] gi|258621723|ref|ZP_05716754.1| seryl-tRNA synthetase [Vibrio mimicus VM573] gi|258626331|ref|ZP_05721178.1| seryl-tRNA synthetase [Vibrio mimicus VM603] gi|262158404|ref|ZP_06029520.1| seryl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|262165386|ref|ZP_06033123.1| seryl-tRNA synthetase [Vibrio mimicus VM223] gi|262170266|ref|ZP_06037953.1| seryl-tRNA synthetase [Vibrio cholerae RC27] gi|298498786|ref|ZP_07008593.1| seryl-tRNA synthetase [Vibrio cholerae MAK 757] gi|30173216|sp|Q9KSZ6|SYS_VIBCH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|172047403|sp|A5F2H1|SYS_VIBC3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783501|sp|C3LU07|SYS_VIBCM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|9655580|gb|AAF94269.1| seryl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546863|gb|EAX57021.1| seryl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121631195|gb|EAX63568.1| seryl-tRNA synthetase [Vibrio cholerae V52] gi|124115895|gb|EAY34715.1| seryl-tRNA synthetase [Vibrio cholerae 1587] gi|125621973|gb|EAZ50297.1| seryl-tRNA synthetase [Vibrio cholerae V51] gi|126512498|gb|EAZ75092.1| seryl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|126518589|gb|EAZ75812.1| seryl-tRNA synthetase [Vibrio cholerae B33] gi|146316684|gb|ABQ21223.1| seryl-tRNA synthetase [Vibrio cholerae O395] gi|148876356|gb|EDL74491.1| seryl-tRNA synthetase [Vibrio cholerae 623-39] gi|149741468|gb|EDM55498.1| seryl-tRNA synthetase [Vibrio cholerae MZO-2] gi|227009171|gb|ACP05383.1| seryl-tRNA synthetase [Vibrio cholerae M66-2] gi|227012925|gb|ACP09135.1| seryl-tRNA synthetase [Vibrio cholerae O395] gi|229333575|gb|EEN99061.1| seryl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|229339302|gb|EEO04319.1| seryl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229344871|gb|EEO09845.1| seryl-tRNA synthetase [Vibrio cholerae RC9] gi|229347261|gb|EEO12221.1| seryl-tRNA synthetase [Vibrio cholerae TMA 21] gi|229351000|gb|EEO15941.1| seryl-tRNA synthetase [Vibrio cholerae B33] gi|229357518|gb|EEO22435.1| seryl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229370969|gb|ACQ61392.1| seryl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254843944|gb|EET22358.1| seryl-tRNA synthetase [Vibrio cholerae MO10] gi|255736597|gb|EET91994.1| seryl-tRNA synthetase [Vibrio cholera CIRS 101] gi|258581383|gb|EEW06285.1| seryl-tRNA synthetase [Vibrio mimicus VM603] gi|258585954|gb|EEW10672.1| seryl-tRNA synthetase [Vibrio mimicus VM573] gi|262021281|gb|EEY39995.1| seryl-tRNA synthetase [Vibrio cholerae RC27] gi|262025102|gb|EEY43770.1| seryl-tRNA synthetase [Vibrio mimicus VM223] gi|262029845|gb|EEY48493.1| seryl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|297543119|gb|EFH79169.1| seryl-tRNA synthetase [Vibrio cholerae MAK 757] gi|327483814|gb|AEA78221.1| Seryl-tRNA synthetase [Vibrio cholerae LMA3894-4] Length = 435 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 194/434 (44%), Positives = 268/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +A+K + TL + L + E V + L + +PN+P + VP G + Sbjct: 61 LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G + ++H ++GE +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE+ P LV E ++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 TR EDS E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ Q YRE Sbjct: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILENY ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM L I Sbjct: 421 PAVLQKYMGGLTHI 434 >gi|262171855|ref|ZP_06039533.1| seryl-tRNA synthetase [Vibrio mimicus MB-451] gi|261892931|gb|EEY38917.1| seryl-tRNA synthetase [Vibrio mimicus MB-451] Length = 435 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 194/434 (44%), Positives = 268/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +A+K + TL + L + E V + L + +PN+P + VP G + Sbjct: 61 LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G + ++H ++GE +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE+ P LV E ++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 TR EDS E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ Q YRE Sbjct: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILENY ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM L I Sbjct: 421 PAVLQKYMGGLTQI 434 >gi|90579108|ref|ZP_01234918.1| seryl-tRNA synthetase [Vibrio angustum S14] gi|90439941|gb|EAS65122.1| seryl-tRNA synthetase [Vibrio angustum S14] Length = 435 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 194/434 (44%), Positives = 267/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R E + +L+EK + L K E+++A+RNS S IGQ Sbjct: 1 MLDSKLLRTELDETAEKLARRGFNLDVETLRNLEEKRKSLQVKTEELQAQRNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + E L +L +K E+ + L + +PN+P + VP+G + Sbjct: 61 AKAKGDHEEAERIMAEVGNLGSELDDAKKALAELQAELDVITQSVPNIPDDSVPVGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ I G+ + ++H ++GE G +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 ENVEISRWGEPKALDFDVKDHVDLGEMAGGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF +D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTQPLTEKVNDEEPRVLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMMRDTITDEADLPVKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF ACKTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGACKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELLHTLNGSGLAVGRTMVAILENNQQADGRIEI 420 Query: 410 PTVLRPYMNNLAVI 423 P VLR YMN + I Sbjct: 421 PEVLRKYMNGMTHI 434 >gi|183598338|ref|ZP_02959831.1| hypothetical protein PROSTU_01730 [Providencia stuartii ATCC 25827] gi|188020514|gb|EDU58554.1| hypothetical protein PROSTU_01730 [Providencia stuartii ATCC 25827] Length = 429 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 192/430 (44%), Positives = 261/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R E + L+E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRTELDAVAEKLARRGFTLDVEKLRELEERRKVLQVETESLQAERNSRSKSIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + ++ ++ + IPN+P + VP G + Sbjct: 61 AKARG--EDIEPLRQEVNQLGEKLDAAKLALDKLQQEIRDIALSIPNMPDDAVPDGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ ++H +GE G +DF A KL+GARF V+ G +A L RAL Q Sbjct: 119 DNVEVARWGEPRQYDFEIKDHVSLGELAGGLDFPAAVKLTGARFVVMKGQIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+DLHT +HGY E+ P LV + +YGTGQ+PKF +D+F T LIPT+E Sbjct: 179 FMLDLHTEQHGYQELYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEEEAESTYALIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL EI++ +LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I E Sbjct: 239 VPVTNLVRDEILDEDALPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVHPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E + AE++L+ L L YR V LCTGD+GF + KTYDLEVWL QN YREISSC Sbjct: 299 KSMEALEELTGHAEKVLQLLKLPYRKVILCTGDIGFGSRKTYDLEVWLPAQNTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R K + HTLNGSG+AVGR L+A+LENY ADG + +P VL Sbjct: 359 SNMWDFQARRMQARFRSKGDKKTQLVHTLNGSGLAVGRTLVAVLENYQLADGRIEVPEVL 418 Query: 414 RPYMNNLAVI 423 RPYM L I Sbjct: 419 RPYMKGLEYI 428 >gi|147676348|ref|YP_001210563.1| seryl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|189083576|sp|A5D6D5|SYS_PELTS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|146272445|dbj|BAF58194.1| seryl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 422 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 203/424 (47%), Positives = 279/424 (65%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R NP + AL +R + + LDE+ R + +E ++ RRN S +IG+ Sbjct: 1 MLDMKFVRNNPAAVRDALARRGVSVALDEFYKLDEERREKLFIVEQMKNRRNVVSEEIGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + E L Q+ +++E E+ L+ ++ IPN+P E VP G A Sbjct: 61 LKKSGKDAP--EMVLEMRDLSRQIKEIDEEIKELDGRLQDMLLNIPNIPHESVPEGAGAA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN ++R+ GK R H+EIGE L ++DF+R K++GARFS G+ A LERA+ Sbjct: 119 ENPVVRTWGKPRDFGFTPRPHWEIGEQLDIIDFERGGKVAGARFSFYKGYGARLERAVIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHT+EHGY E+ P +V ++M GTGQ+PKFA+DMF +LIPT+EV +TNL Sbjct: 179 FMLDLHTAEHGYVEIFPPFIVNRDSMVGTGQLPKFAEDMFKLEGAEYYLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y +EI++ + LP+ + FR+EAG+AGRDTRG++RQHQF K ELV R EDS+ E Sbjct: 239 YRNEILDGEKLPILHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFCRPEDSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AE++L++L L YRVV LCTGDLGFSA KTYDLEVWL Y+EISSCS +F Sbjct: 299 EKLTADAEKVLQKLGLPYRVVVLCTGDLGFSAAKTYDLEVWLPSYQEYKEISSCSNFADF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R+R+ K +F HTLNGSG+AVGR + AILENY ADGSVT+P LRPYM Sbjct: 359 QARRAGIRFRNARGK-TEFVHTLNGSGLAVGRTVAAILENYQEADGSVTVPEALRPYMGG 417 Query: 420 LAVI 423 L+ I Sbjct: 418 LSRI 421 >gi|121998174|ref|YP_001002961.1| seryl-tRNA synthetase [Halorhodospira halophila SL1] gi|166222731|sp|A1WWU7|SYS_HALHL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|121589579|gb|ABM62159.1| seryl-tRNA synthetase [Halorhodospira halophila SL1] Length = 425 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 268/425 (63%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R +PE + L +R E + +LD + R L ++ + ++ +RN S +IG Sbjct: 1 MIDPKLLRNDPEGVAANLARRGFEFDAAGYRALDARRRDLQQETQTLQNQRNERSKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G ++ LK E + E+L E +EV L +L +PN+ E+VP G Sbjct: 61 AKKRG--EDIEPLKAEVGRIAERLSEAETALNEVQEQLDELHLGLPNLLDEQVPDGQDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N ++R G P+ R+H ++GE LG MDF+ A +++G+RF L+G LA L RAL Q Sbjct: 119 DNRVLRQWGGIPALSFKPRDHVDLGELLGGMDFEAAARIAGSRFVTLSGPLARLHRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--RWLIPTSEVSLTN 238 FM+DLH EHGYTEV P LV ++ GTGQ+PKF DD+F +L PT+EV +TN Sbjct: 179 FMLDLHCREHGYTEVYVPYLVNARSLTGTGQLPKFEDDLFRVEHDPSLYLAPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L I+E +PLRF P FRSEAGS G+DTRGM+RQHQF K ELV + R +S+ Sbjct: 239 LVQERIVEDADMPLRFVCHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQVVRPGESWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE +L+RL L YRVVSLC GD+GFSA +TYDLEVWL Q YREISSCS + Sbjct: 299 LEALTGHAETVLRRLALPYRVVSLCGGDIGFSAARTYDLEVWLPAQERYREISSCSNFTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +R+R+P + + HTLNGSG+AVGRCL+AILENY ADG V +P L PYM Sbjct: 359 FQARRLQARWRNPETGKPEPVHTLNGSGLAVGRCLVAILENYQEADGRVNVPEALVPYMG 418 Query: 419 NLAVI 423 ++ Sbjct: 419 GQRLL 423 >gi|261210729|ref|ZP_05925021.1| seryl-tRNA synthetase [Vibrio sp. RC341] gi|260840214|gb|EEX66794.1| seryl-tRNA synthetase [Vibrio sp. RC341] Length = 435 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 194/434 (44%), Positives = 268/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +A+K + TL + L + E V + L + +PN+P + VP G + Sbjct: 61 LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGRDDS 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G + ++H ++GE +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE+ P LV E ++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 TR EDS E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ Q YRE Sbjct: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILENY ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM L I Sbjct: 421 PAVLQKYMGGLTHI 434 >gi|260424728|ref|ZP_05733081.2| serine--tRNA ligase [Dialister invisus DSM 15470] gi|260402970|gb|EEW96517.1| serine--tRNA ligase [Dialister invisus DSM 15470] Length = 440 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 189/427 (44%), Positives = 270/427 (63%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++IR+N E + L RH + + ++ LD K R L++ E +++ RN+ + +I Sbjct: 7 MLDIKFIRENTEAVKANLVNRHNDFDLDEVIELDRKRRELLQMTEALKSERNAETKKIAL 66 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A N + + ++ ++KE V L+ + IPN+ VP+G + Sbjct: 67 AKK--NKEDASVAISAMREVGTKIAAIDKELAGVELILQDSLLRIPNMTDASVPVGKDDS 124 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G+ ++EH+E+GE LG++D +RA K+SGARF A LERA+ Sbjct: 125 ENPEVRRWGEIRKFPFPAKEHYELGENLGILDSERAGKVSGARFYFYLSMAARLERAVYN 184 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+D+HT ++ +TEV P ++ +M GTGQ+PKF DDM+ + ++ PT+EV LTN Sbjct: 185 FMLDVHTQQNDFTEVIPPYIINGASMQGTGQLPKFEDDMYKVEGENMYMTPTAEVPLTNY 244 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EI++ LP+ T L P FR EAGSAG+DTRG++RQHQF K E+V + EDS+ E Sbjct: 245 FSGEILDGAVLPVHLTALTPCFRKEAGSAGKDTRGLIRQHQFHKVEMVKYCKPEDSWDEL 304 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + + AE+IL+ L L Y VV LCTGD+GFS+ KTYD+EVW+ GQ YREISSCS C +F Sbjct: 305 ESLTAEAEKILQLLKLPYHVVCLCTGDIGFSSAKTYDIEVWMPGQQKYREISSCSNCLDF 364 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSG+AVGR + AI+ENY DG++ +P VLRPYMN Sbjct: 365 QARRANIRFRRHQGDKPEFVHTLNGSGLAVGRTVAAIMENYQQEDGTIVVPDVLRPYMNG 424 Query: 420 LAVIKKE 426 L +I K Sbjct: 425 LEIIGKR 431 >gi|134297896|ref|YP_001111392.1| seryl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|172044203|sp|A4J0G4|SYS_DESRM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|134050596|gb|ABO48567.1| seryl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 424 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 199/425 (46%), Positives = 272/425 (64%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R NPE + LKKR + + L LD R + E ++ RN S +IG+ Sbjct: 1 MLDIKFVRSNPELVLEGLKKRGSDISLDEFLKLDSMRREKLVVAEQLKNTRNVVSQEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + L E + +++ ++ E + L++++ IPN+P E VP+G N Sbjct: 61 LKKAGQDAEEKTL--EMRKVSQKIKDMDDEIRNIEEKLQEILLSIPNIPHESVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR GK + H+++GE L ++DF+R K++GARFS G A LERAL Sbjct: 119 DNVEIRRWGKPRGFEFEPKPHWDLGEDLNILDFERGGKVTGARFSFYKGMGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHT EHGYTE+ P +V ++M GTGQ+PKFA+DMF +LIPT+EV +TNL Sbjct: 179 FMLDLHTREHGYTEIFPPFIVNGDSMLGTGQLPKFAEDMFKLEGLNYYLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+ + LP+ + FR+EAG+AGRDTRG++RQHQF K ELV ++ E+SF E Sbjct: 239 YRDEILAEEQLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFSKPEESFDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ER+ + AE+IL+ L L YRVV L TGD+GF++ KTYDLEVWL N Y+EISSCS +F Sbjct: 299 ERLTANAEKILQALGLPYRVVLLSTGDMGFTSAKTYDLEVWLPSYNAYKEISSCSNFLDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR +F HTLNGSG+AVGR L AILENY ADGS+T+P VL PYM Sbjct: 359 QARRANIKYRPTPKSKPEFVHTLNGSGIAVGRALSAILENYQEADGSITVPPVLVPYMGG 418 Query: 420 LAVIK 424 + I Sbjct: 419 IERIT 423 >gi|330721801|gb|EGG99781.1| Seryl-tRNA synthetase [gamma proteobacterium IMCC2047] Length = 426 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 203/425 (47%), Positives = 281/425 (66%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R N + + LKK+ + + L+ + + + + E ++ RNS S IG+ Sbjct: 1 MLDSKLLRANLQDVADLLKKKKYQLDVARVTELEAQRKAIQTETEQLQNDRNSRSKNIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E +++ E+L + + ++V + L+ ++S +PN+P E VP G Sbjct: 61 AKAAG--EDIAPLIAEMNSMGERLDECKAKLNDVQAQLEGILSGVPNLPHESVPEGEDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + + G+ S ++H ++G G +DF+ A KL+GARF+ + G +A L RAL Q Sbjct: 119 DNVTVLTWGEPRSFDFEPKDHVDVGANTGGLDFETAAKLTGARFATMKGQMAQLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM++LHT +HGY EV P +V E +YGTGQ+PKFA+D+F + +LIPT+EV +TN Sbjct: 179 FMLNLHTQQHGYEEVYVPYIVNSETLYGTGQLPKFAEDLFKVGSENDWYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y EI+++ LP RFT P FRSEAGS GRDTRGM+RQHQF K ELV + SF Sbjct: 239 MYRGEILDAGELPKRFTAHTPCFRSEAGSYGRDTRGMIRQHQFEKVELVQLVEPTKSFDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E ++ AE++L+ L+L YR V LC GDLGFSA KTYDLEVWL GQ+ YREISSCS C + Sbjct: 299 LEELVGQAEKVLQLLNLPYRKVILCGGDLGFSATKTYDLEVWLPGQDKYREISSCSNCLD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM R+R+P + + HTLNGSG+AVGR L+AILENY NADGSVTIP VLRPYMN Sbjct: 359 FQARRMQLRWRNPETGKPELLHTLNGSGLAVGRTLVAILENYQNADGSVTIPEVLRPYMN 418 Query: 419 NLAVI 423 N I Sbjct: 419 NAEFI 423 >gi|39995148|ref|NP_951099.1| seryl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|67461826|sp|Q74H55|SYS_GEOSL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|39981910|gb|AAR33372.1| seryl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|298504178|gb|ADI82901.1| seryl-tRNA synthetase [Geobacter sulfurreducens KN400] Length = 422 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 199/424 (46%), Positives = 269/424 (63%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R+N E ++ L R E LDE+ R L+ + E ++A +NS S I + Sbjct: 1 MLDAKYLRENLEEVEARLATRGSEVSLGRFRELDERRRALLTESESLKALKNSVSEAISK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S + E + ++ L+ E + L+ ++ +PNVP VP+G S Sbjct: 61 VK---DKSQIQDKIAEMREVGVRIKGLDDELRGIEDELQMVLLTVPNVPHPTVPVGASEA 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R+ G+ P + H+EIGE LG++DF+R KL+GARF++ G A LERAL Sbjct: 118 DNRQVRTWGEPPCFAFDPKPHWEIGEGLGILDFERGAKLTGARFTLYRGAGARLERALVN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHT H Y E+ P +V E+M GTGQ+PKF DD+F +LIPT+EV +TN+ Sbjct: 178 FMLDLHTERHNYLEMLPPFVVNRESMTGTGQLPKFEDDLFHLEGVDYFLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+++ LPL +T P FR EAGS G+D RG++RQHQF K ELV S+ E Sbjct: 238 HRAEILKAADLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQFNKVELVKFVHPATSYDEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++LS AEE+L++L L YRVV LCTGD+GFSA KTYD+EVWL GQ YREISSCS +F Sbjct: 298 EKLLSNAEEVLRQLGLAYRVVELCTGDMGFSAAKTYDIEVWLPGQETYREISSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 QSRR + R+R+ +F HTLNGSG+AVGR L+AILENY DGSV IP VLRPYM Sbjct: 358 QSRRASIRFREDEKSKPEFVHTLNGSGLAVGRTLVAILENYQQEDGSVVIPDVLRPYMGG 417 Query: 420 LAVI 423 L I Sbjct: 418 LQKI 421 >gi|127512948|ref|YP_001094145.1| seryl-tRNA synthetase [Shewanella loihica PV-4] gi|166223287|sp|A3QEI8|SYS_SHELP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|126638243|gb|ABO23886.1| seryl-tRNA synthetase [Shewanella loihica PV-4] Length = 428 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 197/429 (45%), Positives = 265/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E L R + + L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRTELEATAERLATRGFILDVDRLSKLEEKRKSLQVATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V + + L +L E E ++ L + +PN+P E PIG N Sbjct: 61 AKAKG--EDVAPIMAKVGDLGAELSSKEAELKQLLEELNAIAMSVPNLPDESAPIGADEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ ++H ++GE +DF A K++G+RF V+ G +A + RAL Q Sbjct: 119 DNVEIRRWGEPKQFDFDVKDHVDLGEQHAGLDFKSAVKITGSRFIVMKGQIARMHRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV ++++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTETYVPLLVNEDSLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL II+ LP++ T FRSEAGS GRDTRG++RQHQF K ELV + + ED Sbjct: 239 PLTNLARDTIIDEDELPIKMTAHTACFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE +L+RL L YR V LCTGD+GF A KT+D+EVWL QN YREISSCS Sbjct: 299 SMAALESLTQHAETVLQRLGLPYRTVVLCTGDMGFGAAKTFDIEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RY+ ++K HTLNGSG+AVGR L+A+LENY NADGS+T+P LR Sbjct: 359 NMQDFQARRMQARYKAKSAKKPALLHTLNGSGLAVGRTLVAVLENYQNADGSITVPEALR 418 Query: 415 PYMNNLAVI 423 PYM L I Sbjct: 419 PYMGGLTQI 427 >gi|291616897|ref|YP_003519639.1| SerS [Pantoea ananatis LMG 20103] gi|291151927|gb|ADD76511.1| SerS [Pantoea ananatis LMG 20103] Length = 430 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 201/431 (46%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + E + SL+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVEMLRSLEERRKVLQVETENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E ++L E+L + E E+ + ++ +PN+P + VP+G Sbjct: 61 AKARG--EDIEPLRQEVNSLGERLDAAKAELDELQNQIRDFSLALPNLPADVVPLGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ I G+ ++H E+GEA +DF A KL+G+RF V+ G +A L RAL Q Sbjct: 119 ENLEISRWGEPRQFDFQVKDHVELGEAAKGLDFAAAVKLTGSRFVVMQGQIARLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FMIDLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMIDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTRPLEEESESSHYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E ++LPL+ T P FRSEAGS GRDTRG++R HQF K E+V I Sbjct: 239 EVPLTNLVRDEIVEEENLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVAP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E ++ AE++L+ L+L YR V LCTGD+GF A KTYDLEVWL QN YREISS Sbjct: 299 ETSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGATKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY DG + +P V Sbjct: 359 CSNMGDFQARRMQARTRSKQDKKPRLVHTLNGSGLAVGRTLVAVLENYQQQDGRIAVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMKGLEFI 429 >gi|261378875|ref|ZP_05983448.1| serine--tRNA ligase [Neisseria cinerea ATCC 14685] gi|269144690|gb|EEZ71108.1| serine--tRNA ligase [Neisseria cinerea ATCC 14685] Length = 431 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 201/433 (46%), Positives = 277/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTASVAERLARRGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPTGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +AHL RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIAHLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + I++ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVAGSILDEGGLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|78224711|ref|YP_386458.1| seryl-tRNA synthetase [Geobacter metallireducens GS-15] gi|123570656|sp|Q39PU1|SYS_GEOMG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|78195966|gb|ABB33733.1| seryl-tRNA synthetase [Geobacter metallireducens GS-15] Length = 423 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 196/426 (46%), Positives = 273/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R+N E ++ L R + LD + R L+++ E ++A RN+ S +I + Sbjct: 1 MLDPKHLRENFESVEQRLATRGGAVTLDRFRELDSRRRELLREAESLKAVRNAASEEISR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S E + ++ +L+ + V L+ ++ IPN+P + VP+G S Sbjct: 61 IK---DKSQAQPRIAEMREVSAKIKVLDDDLRGVDDDLQAVLLTIPNIPHQSVPVGASEA 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G+ P R H+EIGE LG++DF+R KL+GARF++ G A LERAL Sbjct: 118 DNREVRKWGEPPRFGFTPRPHWEIGEGLGILDFERGAKLTGARFTLYRGAGARLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+DLHT +HGY E P +V E+M GTGQ+PKF +D+F +LIPT+EV +TN+ Sbjct: 178 FMLDLHTEKHGYEETLPPFMVNRESMTGTGQLPKFEEDLFHLDGTDYYLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ LPL +T P FR EAGS G+D RG++RQHQF K ELV T S+ E Sbjct: 238 HRGEILKGSDLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQFNKVELVKFTHPSTSYAEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ER+L+ AEE+L++L LHYRVV LCTGD+GFSA KTYD+EVWL Q+ YREISSCS +F Sbjct: 298 ERLLANAEEVLRQLGLHYRVVELCTGDMGFSAAKTYDIEVWLPAQDTYREISSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R+R+ + +F HTLNGSG+AVGR L+AILENY DG+V IP VLRPYM Sbjct: 358 QARRASIRFREDDKAKPEFAHTLNGSGLAVGRTLVAILENYQQEDGTVVIPEVLRPYMGG 417 Query: 420 LAVIKK 425 + I + Sbjct: 418 CSSIGR 423 >gi|312792870|ref|YP_004025793.1| seryl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180010|gb|ADQ40180.1| seryl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 420 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 199/424 (46%), Positives = 281/424 (66%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR NPE + L KR+ + IL LDEK R L+ ++E ++A +N S ++ + Sbjct: 1 MLDLKYIRTNPEKVQEGLSKRNKDISIAPILELDEKRRKLLAEVESLKALQNQKSKEVPR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V L NE L +++ L+ EV ++K++ IPN+P E VP+G Sbjct: 61 LKKEGK--DVTELMNELKELSDKIKELDSRFKEVEDEIEKILLTIPNIPHESVPVGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + H+EIG +LG++DF+RA+K+SG+RF+ G A LERAL Sbjct: 119 ENVEVRRWGDVRVPDFEVKPHWEIGMSLGILDFERASKVSGSRFTFYRGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH +HGYTE+ P LV ++M GTGQ+PKF +D F TTD +LIPT+EV +TN + Sbjct: 179 FMLDLHIEKHGYTEIFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LP+++ + FR+EAG+AG+DTRG++RQHQF K ELV + E+S+ E E Sbjct: 239 REEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEESYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 ++ + AE++LK L L YRVV LC+GDLGFS+ KTYD+EVW+ Y EISSCS ++Q Sbjct: 299 KLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFESYQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR N R+R + K L + HTLNGSG+AVGR L AILEN+ DG+V +P VLR YM Sbjct: 359 ARRANIRFRRKDGK-LDYVHTLNGSGLAVGRTLAAILENFQQKDGTVVVPEVLRKYM-GT 416 Query: 421 AVIK 424 VIK Sbjct: 417 DVIK 420 >gi|319790114|ref|YP_004151747.1| seryl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317114616|gb|ADU97106.1| seryl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 427 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 203/429 (47%), Positives = 278/429 (64%), Gaps = 5/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+DI+ +R+ PE L +R + +L++D + R LI + E+++ARRN S +I Sbjct: 1 MIDIKALRREPEKFKELLSRRDPLYASMVDELLAVDAERRALITEAENLKARRNKLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ EG LK E + E+L +E+E EV +LI IPN P VP+G Sbjct: 61 GKLFKEGRREEALKLKAEVEEISEKLVKVERELAEVEKKFNRLILSIPNPPHPSVPVGED 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+N+++R G+KP H++I ++L ++DF+RATKL+G+RF V A LERAL Sbjct: 121 ENDNVVVRVWGEKPKFDFTPVPHWDIAKSLDILDFERATKLAGSRFVVYKKWGAKLERAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 FM+DLHT+EHGY E+ P LV + M GTGQ+PKF +D++ + WLIPT+EV LT Sbjct: 181 INFMLDLHTTEHGYQEIIPPFLVNTKTMTGTGQLPKFEEDLYKIEGEDLWLIPTAEVPLT 240 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+++EI+ K+LP+ +T P FR EAG+ GRD RG++R HQF K ELV I E S+ Sbjct: 241 NLHANEILPEKALPIYYTAYTPCFRKEAGAHGRDVRGIMRLHQFNKVELVKIVHPETSYD 300 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+++ AE++L+ L LHYRVV LCTGDLGFSA KTYD+EVW+ Q YREISSCS C Sbjct: 301 ELEKLVKEAEKVLQLLGLHYRVVELCTGDLGFSAAKTYDIEVWIPSQERYREISSCSNCE 360 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R+RD K + HTLNGSG+AVGR +IAILE + DGSV +P VL+ Y+ Sbjct: 361 DFQARRAKIRFRDKEGK-TQLVHTLNGSGLAVGRTVIAILEQFQQKDGSVKVPEVLQDYL 419 Query: 418 NNLAVIKKE 426 VI E Sbjct: 420 K-TKVITPE 427 >gi|251792122|ref|YP_003006842.1| seryl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] gi|247533509|gb|ACS96755.1| seryl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] Length = 435 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 203/437 (46%), Positives = 268/437 (61%), Gaps = 14/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR E I L+E+ + L K E ++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRGFTLDVEKITQLEEQRKALQVKTETLQAERNARSKVIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + E+L + E +V ++L + IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEVDHMGEELEQGKAELEKVQNALNDIALNIPNIPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ + G+ +H +GE L +DF A KL+G+RF V+ G +A L RA+ Sbjct: 119 SDNLEVSRWGEPRKFDFDILDHVSLGEQLQGLDFAAAVKLTGSRFVVMKGQIARLHRAIS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWL 228 QFM+DLHT +HGYTE P LV + +YGTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYTEAYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEGQDPNEVQRTYGL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EI+E+++LPL+ T P FRSEAGS GRDTRG++R HQF K ELV Sbjct: 239 IPTAEVPVTNLVRGEILEAENLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF +CKTYDLEVW+ QN YR Sbjct: 299 IVEPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMQARCRSKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIKK 425 +P VLRPYM L VI K Sbjct: 419 VPEVLRPYMGGLEVIGK 435 >gi|83858681|ref|ZP_00952203.1| seryl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] gi|83853504|gb|EAP91356.1| seryl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] Length = 424 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 231/425 (54%), Positives = 296/425 (69%), Gaps = 1/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR P D A+ +R LEPQ++ ++ LD + R +++++ RNS S +IG+ Sbjct: 1 MHDIRLIRDEPAAFDAAMAQRGLEPQAQRLIDLDARRREATTRLQEVETERNSKSKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ +AL+ E +LK ++ L +E L + ++ +PN P E+VP G N Sbjct: 61 AKAQGDEDRFNALRAEVESLKSEMERLTEEARTAEEVLNQHLAALPNRPAEDVPEGADEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G+ + +H +GE LG +DF+RA +SGARF+VL G LA LERALGQ Sbjct: 121 DNEEVRGWGEPRAFDFEPVDHVTVGERLG-LDFERAAAMSGARFAVLQGPLARLERALGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DL T+EHGY E S P +VRDEA++GTGQ+PKFA+D+F TTD RWLIPT+EV LTNL Sbjct: 180 FMLDLQTTEHGYRETSVPYMVRDEALFGTGQLPKFAEDLFRTTDDRWLIPTAEVPLTNLV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I S P+R T L P FRSEAGSAGRDTRG++R HQF K ELVSIT E S E E Sbjct: 240 RDSIHAEDSFPIRMTALTPCFRSEAGSAGRDTRGLIRMHQFLKVELVSITTPEQSEDELE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAEE+L+RL+L YRV+ LCTGD+GFSA +TYDLEVW+ QN YREISSCSTCG+FQ Sbjct: 300 RMTQCAEEVLRRLELPYRVMKLCTGDMGFSARRTYDLEVWMPSQNTYREISSCSTCGDFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR K F HTLNGSG+AVGR L+AILEN+ ADGSV IP LRPYM + Sbjct: 360 ARRMNARYRKEGEKKPDFLHTLNGSGLAVGRALVAILENHQQADGSVYIPEALRPYMGGV 419 Query: 421 AVIKK 425 I+ Sbjct: 420 EAIQP 424 >gi|325144922|gb|EGC67206.1| seryl-tRNA synthetase [Neisseria meningitidis M01-240013] gi|325205599|gb|ADZ01052.1| seryl-tRNA synthetase [Neisseria meningitidis M04-240196] Length = 431 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 201/433 (46%), Positives = 278/433 (64%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E+VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLEAVQKELDAWLLSIPNLPHEDVPFGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RR+ +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRLKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|254291533|ref|ZP_04962324.1| seryl-tRNA synthetase [Vibrio cholerae AM-19226] gi|150422597|gb|EDN14553.1| seryl-tRNA synthetase [Vibrio cholerae AM-19226] Length = 435 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 194/434 (44%), Positives = 268/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +A+K + TL + L + E V + L + +PN+P + VP G + Sbjct: 61 LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G + ++H ++GE +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE+ P LV E ++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTDKHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 TR EDS E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ Q YRE Sbjct: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILENY ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM L I Sbjct: 421 PAVLQKYMGGLTHI 434 >gi|253990316|ref|YP_003041672.1| seryl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781766|emb|CAQ84929.1| seryl-tRNA synthetase [Photorhabdus asymbiotica] Length = 429 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 196/430 (45%), Positives = 263/430 (61%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNILRNELDAVAEKLARRGYTLDVDTLRKQEERRKVLQVETETLQAERNSRSKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G +D L+ E + L E+L + E ++ + ++ L IPNVP + VP+G N Sbjct: 61 AKARG--ENIDPLRQEVNQLGEKLDTAKSELEKLQTEIRDLALNIPNVPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ ++H +GE +DF A KL+G+RF V+ G +A L RAL Q Sbjct: 119 DNLEVSRWGEPRKYDFEVKDHVSLGELANGLDFAAAVKLTGSRFVVMKGQIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM++LHT +HGY E P LV + +YGTGQ+PKF +D+F T LIPT+E Sbjct: 179 FMLNLHTEQHGYLETYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEEETGSHYALIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL EI++ LPLR T P FRSEAGS GRDTRG++R HQF K ELV I E Sbjct: 239 VPVTNLVRDEILDESELPLRMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVHPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S E + AE++L+ L+L YR V LCTGD+GF ACKTYDLEVWL QN YREISSC Sbjct: 299 ESMNALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGACKTYDLEVWLPAQNAYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R K + HTLNGSG+AVGR L+AI+ENY ADG + IP VL Sbjct: 359 SNMWDFQARRMQARFRGKEDKKTQLLHTLNGSGLAVGRTLVAIMENYQQADGRIEIPEVL 418 Query: 414 RPYMNNLAVI 423 RPYM L I Sbjct: 419 RPYMGGLEYI 428 >gi|304386837|ref|ZP_07369101.1| serine--tRNA ligase [Neisseria meningitidis ATCC 13091] gi|304339091|gb|EFM05181.1| serine--tRNA ligase [Neisseria meningitidis ATCC 13091] Length = 431 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 200/433 (46%), Positives = 275/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYNFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + I++ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVAGSILDEGGLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|146296476|ref|YP_001180247.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166201242|sp|A4XJH1|SYS_CALS8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|145410052|gb|ABP67056.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 420 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 202/424 (47%), Positives = 282/424 (66%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR NPE + L KR+ + IL LDEK R L+ ++E ++A +N S +I + Sbjct: 1 MLDLKFIRSNPEKVQEGLNKRNKDISIAPILELDEKRRKLLAEVEKMKAIQNQKSKEIPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + L NE L +++ L+ + EV ++K++ IPN+P E VPIG Sbjct: 61 LKKEGKDT--TELMNELKELSDKIKELDSQVKEVEDEIEKILLTIPNIPHESVPIGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + H+EIGE LG++DF+RA+K+SG+RF+ G A LERAL Sbjct: 119 ENVEVRRWGEPRVPDFEIKPHWEIGEKLGILDFERASKVSGSRFTFYRGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH +HGY E+ P LV ++M GTGQ+PKF +D F TTD +LIPT+EV +TN + Sbjct: 179 FMLDLHIEKHGYVELFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LP+++ + FR+EAG+AG+DTRG++RQHQF K ELV + EDS+ E E Sbjct: 239 REEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 ++ + AE++LK L L YRVV LC+GDLGFS+ KTYD+EVW+ Y EISSCS +FQ Sbjct: 299 KLTADAEDVLKHLGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFESFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR N R+R + K L F HTLNGSG+AVGR + AILEN+ DGSV +P VLR YM Sbjct: 359 ARRANIRFRRKDGK-LDFVHTLNGSGLAVGRTVAAILENFQQKDGSVVVPEVLRKYM-GT 416 Query: 421 AVIK 424 +IK Sbjct: 417 DIIK 420 >gi|325134782|gb|EGC57419.1| seryl-tRNA synthetase [Neisseria meningitidis M13399] Length = 431 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 201/433 (46%), Positives = 278/433 (64%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E+VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLEAVQKELDAWLLSIPNLPHEDVPFGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RR+ +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRLKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|257792717|ref|YP_003183323.1| seryl-tRNA synthetase [Eggerthella lenta DSM 2243] gi|317489004|ref|ZP_07947531.1| seryl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|325831041|ref|ZP_08164365.1| serine--tRNA ligase [Eggerthella sp. HGA1] gi|257476614|gb|ACV56934.1| seryl-tRNA synthetase [Eggerthella lenta DSM 2243] gi|316911871|gb|EFV33453.1| seryl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|325486962|gb|EGC89408.1| serine--tRNA ligase [Eggerthella sp. HGA1] Length = 429 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 194/430 (45%), Positives = 274/430 (63%), Gaps = 5/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R N E + A+K RH + LDE R I K E ++A RN+ S IGQ Sbjct: 1 MLDIKFVRDNQEAVAEAMKNRHASWDAARFSELDETRRAAIAKEEALQAERNATSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G +A K + ++L ++ K+ +L++++ PN+P + P+G + Sbjct: 61 MMAAGQKDEAEAAKQRVRAINDELAVIGKDREAADEALREVLLRTPNMPADSTPVGDDED 120 Query: 121 ENILIRSVGKKPSA---IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N +R G + H+++G LG++DF+RA KL+ +RF +L G A LERA Sbjct: 121 DNPEVRRWGAPRDFAAEGFEMKPHWDLGPELGIIDFERAVKLAASRFILLGGLGARLERA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L FM D H GY E P + E + GTGQ+PKF +D+F TT+G +LIPT+EV LT Sbjct: 181 LINFMADTHA-SRGYKEWWCPAMANAETLTGTGQLPKFEEDLFHTTEGLYLIPTAEVQLT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+++ E++++ LPL++ P FR EAGSAGRDTRG++R HQF K E+V + E+SF Sbjct: 240 NIHAGEVLDAGQLPLKYCAFTPCFREEAGSAGRDTRGLIRVHQFDKVEMVKYAKPEESFD 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + E M++ AE IL+ L L YRV+SLCTGD+GFSA KTYDLEVWL N Y+EISSCS C Sbjct: 300 DLEAMVADAENILQLLGLPYRVISLCTGDIGFSAAKTYDLEVWLPSYNGYKEISSCSNCT 359 Query: 358 NFQSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +YRDP + K ++ HTLNGSG+AVGR + A++ENY DG+V +P VL PY Sbjct: 360 DFQARRANIKYRDPENFKGSRYVHTLNGSGLAVGRTMAAVIENYQQPDGTVRVPDVLVPY 419 Query: 417 MNNLAVIKKE 426 M + VI E Sbjct: 420 MGGVEVIAPE 429 >gi|260428621|ref|ZP_05782600.1| seryl-tRNA synthetase [Citreicella sp. SE45] gi|260423113|gb|EEX16364.1| seryl-tRNA synthetase [Citreicella sp. SE45] Length = 430 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 201/429 (46%), Positives = 278/429 (64%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R + QS IL++DE+ R I E +A +N S ++G+ Sbjct: 1 MHDIRAIRENPAAFDAALSRRGMPSQSPAILAMDEERRAAIHAAETAQAEQNKASKEVGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ K ++ ++ E+ + L +L+ +PN+P ++ P G Sbjct: 61 AKASGDEAEFERLRALVGEKKAEVAEMQTRAKELDAQLAELLMGLPNLPFDDTPDGADEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G + +EH+E+ + MDF+ A KLSGARF VL+G +A + RAL Q Sbjct: 121 DNVEIHRWGTPATLDFTPKEHYELPGVVKGMDFETAAKLSGARFVVLSGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G TE P+LVR+E MYGTGQ+PKF DD + T +G WL+PT+EV+LTN+ Sbjct: 181 FMLDTHVEENGLTETWTPVLVREEMMYGTGQLPKFGDDSYQTREGWWLVPTAEVTLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + ++ +LP R+ FRSEAGSAGRDT GMLRQHQF K E+VSIT + S E + Sbjct: 241 NGLTVDEDTLPRRYVAHTQCFRSEAGSAGRDTAGMLRQHQFEKVEMVSITHPDKSRDELD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CA+ IL++L L YR V+LCTGD+GF A +T+DLEVWL GQN YREISS S CG+FQ Sbjct: 301 RMTGCAQGILEKLGLPYRTVALCTGDIGFGARRTHDLEVWLPGQNTYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ F HTLNGSG+AVGRCLIA+LEN ADGSV +P L+P++ Sbjct: 361 ARRMNARFKPTAGGKPDFVHTLNGSGLAVGRCLIAVLENGQQADGSVRLPEALQPWLGGR 420 Query: 421 AVIKKEHIL 429 + L Sbjct: 421 TTLTANGDL 429 >gi|222528873|ref|YP_002572755.1| seryl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|254783001|sp|B9MQM8|SYS_ANATD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|222455720|gb|ACM59982.1| seryl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 420 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 201/424 (47%), Positives = 283/424 (66%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR NPE + L KR+ + IL LDE+ R L+ ++E ++A +N S ++ + Sbjct: 1 MLDLKYIRANPEKVQEGLSKRNKDVSIAPILELDERRRKLLAEVESLKALQNQKSKEVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V L NE L +++ L+ + EV ++K++ IPN+P E VP+G Sbjct: 61 LKKEGK--DVTDLMNELKDLSDKIKELDSKVKEVEDEIEKILLTIPNIPHESVPVGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + H+EIG LG++DF+RA+K+SG+RF+ G A LERAL Sbjct: 119 ENVEVRRWGEVREPDFEIKPHWEIGVNLGILDFERASKVSGSRFTFYRGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH +HGYTE+ P LV ++M GTGQ+PKF +D F TTD +LIPT+EV +TN + Sbjct: 179 FMLDLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LP+++ + FR+EAG+AG+DTRG++RQHQF K ELV T+ EDS+ E E Sbjct: 239 REEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFTKPEDSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 ++ + AE++LK L L YRVV LC+GDLGFS+ KTYD+EVW+ Y EISSCS N+Q Sbjct: 299 KLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFENYQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR N R+R + K L + HTLNGSG+AVGR L AILEN+ DG+V +P VLR YM Sbjct: 359 ARRANIRFRRKDGK-LDYVHTLNGSGLAVGRTLAAILENFQQKDGTVVVPEVLRKYM-GT 416 Query: 421 AVIK 424 VIK Sbjct: 417 DVIK 420 >gi|269139541|ref|YP_003296242.1| seryl-tRNA synthetase [Edwardsiella tarda EIB202] gi|267985202|gb|ACY85031.1| seryl-tRNA synthetase [Edwardsiella tarda EIB202] gi|304559430|gb|ADM42094.1| Seryl-tRNA synthetase [Edwardsiella tarda FL6-60] Length = 430 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 196/431 (45%), Positives = 265/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + + + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRNELDAVAEKLARRGYKLDVDTLRQQEERRKVLQVETESLQAERNSRSKSIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRREVNELGEKLDAAKAELDQLQQEIRDLALSIPNLPDDSVPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I G+ R+H +GE +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNQEICRWGEPRRYDFDVRDHVTLGEMADGLDFAAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV + +YGTGQ+PKF D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYLETYVPYLVNHDTLYGTGQLPKFGADLFHTRPLEEEADSSTYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI+E +LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I R Sbjct: 239 EVPVTNLVRGEILEESALPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEELTAHAEKVLQLLNLPYRKVLLCTGDMGFGSSKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARYRSKDDKKPRLVHTLNGSGLAVGRTLVAVMENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|94497464|ref|ZP_01304034.1| seryl-tRNA synthetase [Sphingomonas sp. SKA58] gi|94423095|gb|EAT08126.1| seryl-tRNA synthetase [Sphingomonas sp. SKA58] Length = 425 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 229/426 (53%), Positives = 292/426 (68%), Gaps = 1/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI++IR+NP D AL +R L P S I++LDEK+R L + + +ARRN S IGQ Sbjct: 1 MHDIRFIRENPAAFDAALGRRGLSPMSAEIITLDEKSRALKTEWQQAQARRNEASKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A + + DALK E + LK+++P LE EE L L+S IPN+P ++VP GT Sbjct: 61 AMAAKDSATADALKAEVAELKDRMPALEGEERAAGEQLTALLSAIPNLPAQDVPDGTDEV 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G + ++H + G ALG +DF+ LSGARF+ L G +A L RAL Q Sbjct: 121 DNVEVARWGTPRAFAFPPQDHADFGPALG-LDFEGGAALSGARFTALRGQMARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D T +GY E PLLV+D A++GTGQ+PKFA+D+F TTDGRWLIPT+EVSLTNL Sbjct: 180 FMLDQQTVANGYEETIVPLLVKDAALFGTGQLPKFAEDLFKTTDGRWLIPTAEVSLTNLV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I+ + LPLR T L P FRSEAGSAGRDTRG +RQHQF K ELV+I R E+S EHE Sbjct: 240 ADQIVPEERLPLRLTALTPCFRSEAGSAGRDTRGFIRQHQFEKVELVTICRPEESEAEHE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM++ AE IL+ L L YR + LCTGD+GF A KTYDLEVWL Q+ YREISS S CG+FQ Sbjct: 300 RMVAAAEGILQALALPYRKMLLCTGDMGFGARKTYDLEVWLPSQDTYREISSVSNCGDFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R R K F HTLNGSG+AVGR L+A+LEN ADGSV IP L PYM + Sbjct: 360 ARRMNARMRPDGGKQTVFLHTLNGSGLAVGRTLVAVLENCQQADGSVVIPDALAPYMGGV 419 Query: 421 AVIKKE 426 ++ Sbjct: 420 TKLEPR 425 >gi|310778421|ref|YP_003966754.1| seryl-tRNA synthetase [Ilyobacter polytropus DSM 2926] gi|309747744|gb|ADO82406.1| seryl-tRNA synthetase [Ilyobacter polytropus DSM 2926] Length = 423 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 206/425 (48%), Positives = 282/425 (66%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R N E L LK R+ + LD + R L+ ++E ++ +RN+ S ++G+ Sbjct: 1 MLDLRYMRDNIEFLKGMLKNRNASVDLDDFEQLDAERRDLLTEVEALKHKRNNVSQEVGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + E T+ ++ L+ + E+ S L+ IPNV E P+G Sbjct: 61 LKREKK--DASHIIAEMGTVSSKIKELDSKLSEIDSKLQYYQMTIPNVYHESTPVGKDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+L+R+ G+ + + H+E+GE LG++DF+R KL GARF+V G A LERAL Sbjct: 119 DNLLVRTWGEPTEFEYEPKNHWELGEELGILDFERGAKLGGARFTVYRGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTE P LVR + GTGQ+PKF DDM+ TTD +LI TSE++LTNL+ Sbjct: 179 FMLDLHTTEHGYTEHITPFLVRRDICEGTGQLPKFEDDMYKTTDEMFLISTSEITLTNLH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS GRD +G++RQHQF K E+V IT E+S+ E + Sbjct: 239 RKEILEESDLPKYYTAHSPCFRREAGSYGRDVKGLIRQHQFNKVEMVKITTPENSYDELD 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M+ AE +L++L L YR+V LC+GD+GFSA KTYDLEVWL GQ YREISSCS CG+FQ Sbjct: 299 KMVVNAETVLQKLGLPYRLVQLCSGDIGFSAAKTYDLEVWLPGQGKYREISSCSNCGDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR +K +F +TLNGSGVAVGR L+AI+ENY DGS+ IP LRPYM + Sbjct: 359 ARRMGLKYRPEGTKKSEFVNTLNGSGVAVGRALLAIMENYQQEDGSIIIPEALRPYMGGI 418 Query: 421 AVIKK 425 VIKK Sbjct: 419 DVIKK 423 >gi|121635325|ref|YP_975570.1| seryl-tRNA synthetase [Neisseria meningitidis FAM18] gi|166222753|sp|A1KV93|SYS_NEIMF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|120867031|emb|CAM10794.1| seryl-tRNA synthetase [Neisseria meningitidis FAM18] gi|325132820|gb|EGC55500.1| seryl-tRNA synthetase [Neisseria meningitidis M6190] gi|325138723|gb|EGC61275.1| seryl-tRNA synthetase [Neisseria meningitidis ES14902] gi|325198782|gb|ADY94238.1| seryl-tRNA synthetase [Neisseria meningitidis G2136] Length = 431 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 278/433 (64%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E+VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLEAVQKELDAWLLSIPNLPHEDVPFGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|15677532|ref|NP_274688.1| seryl-tRNA synthetase [Neisseria meningitidis MC58] gi|30173214|sp|Q9JY95|SYS_NEIMB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|7226938|gb|AAF42032.1| seryl-tRNA synthetase [Neisseria meningitidis MC58] gi|316984831|gb|EFV63788.1| seryl-tRNA synthetase [Neisseria meningitidis H44/76] gi|325140853|gb|EGC63363.1| seryl-tRNA synthetase [Neisseria meningitidis CU385] gi|325199722|gb|ADY95177.1| seryl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 431 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 277/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYDFDTARFDTLEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A N+ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMNQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RR+ +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRLKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|13471180|ref|NP_102749.1| seryl-tRNA synthetase [Mesorhizobium loti MAFF303099] gi|30173204|sp|Q98LC8|SYS_RHILO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|14021924|dbj|BAB48535.1| seryl-tRNA synthetase [Mesorhizobium loti MAFF303099] Length = 434 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 241/434 (55%), Positives = 311/434 (71%), Gaps = 8/434 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-----QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI+WIR NP+ L AL KR + +++ DE R + +++ + RRN+ S Sbjct: 1 MLDIKWIRDNPKALVEALAKRSWSAGEAQSTVDDLIARDEARREHVTELQTKQERRNAAS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG A+ G+ +L + LK E +K + E E E+ +L ++ +PNVPL++VP+ Sbjct: 61 KEIGNAMRSGDAALAEKLKAEVGDIKTFIQNGEARERELDKALTDALAVLPNVPLDDVPV 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G ++N++ VGK P+ + +EHFEIGEALG+MDF+RA KLSG+RF+VL LA +E Sbjct: 121 GKDEHDNVVKHIVGKVPTRSNWVKEHFEIGEALGMMDFERAAKLSGSRFTVLKSGLARME 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTS 232 RA+GQFM+DLHT+EHGY EV PL+VRDE ++GT Q+PKF +D+F T LIPT+ Sbjct: 181 RAIGQFMLDLHTTEHGYEEVIPPLMVRDEVLFGTNQLPKFEEDLFFTPHGEGRLGLIPTA 240 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI + LPLRFT L P FRSEAGSAGRDTRGMLRQHQF+K ELVSIT + Sbjct: 241 EVPLTNLVREEITAHEKLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFYKVELVSITDQ 300 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 + S EHERM CAEE+LKRL+L +R + LCTGD+GF A KTYD+EVWL GQN YREISS Sbjct: 301 DSSLAEHERMTQCAEEVLKRLELPFRTMVLCTGDMGFGARKTYDIEVWLPGQNAYREISS 360 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS CG+FQ+RRM++RY+D + K +F HTLNGSG AVGR LIA++ENY N DGSVTIP V Sbjct: 361 CSVCGDFQARRMDARYKDKDGKGNRFVHTLNGSGTAVGRALIAVIENYQNEDGSVTIPEV 420 Query: 413 LRPYMNNLAVIKKE 426 LRPYM LA I+ + Sbjct: 421 LRPYMGGLAKIEAK 434 >gi|319638614|ref|ZP_07993376.1| seryl-tRNA synthetase [Neisseria mucosa C102] gi|317400363|gb|EFV81022.1| seryl-tRNA synthetase [Neisseria mucosa C102] Length = 431 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 199/433 (45%), Positives = 275/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLAARGYEFDTARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP+G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKADLEQAAADLDAVQKELDAWLLSIPNLPHESVPVGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +AHL RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMKGQIAHLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + I+ LPL+ T +P FRSEAG+ G+D RG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIVAGSDLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ +P VL Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINVPAVL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM + ++ + Sbjct: 419 QPYMGGVTKLEVK 431 >gi|209885385|ref|YP_002289242.1| seryl-tRNA synthetase [Oligotropha carboxidovorans OM5] gi|229890229|sp|B6JFP3|SYS_OLICO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|209873581|gb|ACI93377.1| seryl-tRNA synthetase [Oligotropha carboxidovorans OM5] Length = 439 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 240/439 (54%), Positives = 305/439 (69%), Gaps = 14/439 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR NPE D AL +R LEPQ+ +++LDEK R I E +ARRN+ S +IG+ Sbjct: 1 MHDIRWIRDNPEAFDAALGRRGLEPQAAALIALDEKRRGAIAAFEQAQARRNAASKEIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + DAL E LK +LP ++ + L+K ++ IPN+PL EVP G + Sbjct: 61 AKKAKENARADALMAEVGELKTKLPEMDAAAKRLEEDLRKELAQIPNLPLAEVPEGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ G+ S +EH +GE LG MDF+RA KLSGARF VL LA LERA+GQ Sbjct: 121 GNVQHHVYGEPRSYAFKPKEHVALGEGLGFMDFERAAKLSGARFVVLKSGLARLERAIGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------CTTDGRWLIPTSEV 234 F +D+HT EHGYTEV+ PLLVRD+AM+GT Q+PKF +D F G WLIPT+EV Sbjct: 181 FFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFREDQFAAGSLDAEGQGYWLIPTAEV 240 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I++ K LP+R T L P FR+EAG+AGRDTRGM+RQHQF K ELVSIT ++ Sbjct: 241 PLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPDE 300 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ-------NLY 347 S EHERMLSCAEE+LKRL LHYRV++LCTGD+GF++ KTYD+EVW+ GQ +Y Sbjct: 301 SRNEHERMLSCAEEVLKRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQISSQGEGGMY 360 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 REISSCS CG+FQ+RRM++RYR P++K F HTLNGSG AVGR LIA++E Y DGS+ Sbjct: 361 REISSCSVCGDFQARRMDARYRGPDNK-PHFVHTLNGSGTAVGRALIAVMETYQQEDGSI 419 Query: 408 TIPTVLRPYMNNLAVIKKE 426 +P VL+PYM L VI+++ Sbjct: 420 AVPDVLQPYMGGLKVIERD 438 >gi|220932938|ref|YP_002509846.1| seryl-tRNA synthetase [Halothermothrix orenii H 168] gi|254783031|sp|B8CZZ9|SYS_HALOH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|219994248|gb|ACL70851.1| seryl-tRNA synthetase [Halothermothrix orenii H 168] Length = 422 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 189/426 (44%), Positives = 276/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+N E + LK+R E + LDEK R +I+++E ++ +RN S++IG+ Sbjct: 1 MLDMKFIRENLETVADMLKRRGTEAPLDEFKELDEKRREIIQEVEQLKHKRNVVSSKIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + E + + ++E + L++++ IPN+P + VP+G + Sbjct: 61 LKRAG--EDASDIIAEMKEVSATIKKYDEELRGIEERLQQVVLSIPNMPHDSVPVGEDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + H+++GEAL ++DF+R +K+SGARF+ L G A LER+L Sbjct: 119 DNVEVRRWGEPRKFDFEFKPHWDLGEALDILDFERGSKVSGARFTFLKGAGARLERSLIS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FMID HT ++GYTE+ P +V ++ GTGQ+PKFA DMF +LIPT+EV +TNL Sbjct: 179 FMIDHHT-QNGYTEIFPPFMVNSDSCIGTGQLPKFAGDMFKVEGTDYYLIPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+ ++ LP+ + FR+EAG+ GRDTRG++RQHQF K ELV + SF E Sbjct: 238 YRDEILNAEDLPVYHVAYSACFRAEAGAHGRDTRGIIRQHQFNKVELVKFVHPDKSFEEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEEIL+ L+L YRVV+LCTGDL FS+ KTYD+EVW+ + YREISSCS +F Sbjct: 298 EKLTRNAEEILQMLELPYRVVTLCTGDLTFSSAKTYDIEVWMPAYDTYREISSCSNFKDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R+R ++ HTLNGSG+A+GR + AI+ENY N DGS+T+P VLRPYM Sbjct: 358 QARRAGIRFRPEPGAKAEYVHTLNGSGLAIGRTVAAIMENYQNEDGSITVPEVLRPYM-G 416 Query: 420 LAVIKK 425 + VIK Sbjct: 417 MDVIKP 422 >gi|192359600|ref|YP_001983012.1| seryl-tRNA synthetase [Cellvibrio japonicus Ueda107] gi|238692464|sp|B3PL38|SYS_CELJU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|190685765|gb|ACE83443.1| seryl-tRNA synthetase [Cellvibrio japonicus Ueda107] Length = 428 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 275/427 (64%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R E + L KR E I +L+E + + K E++++ RN+ S IG+ Sbjct: 1 MLDSKLLRTATEQVAKGLAKRGYELDVAKIQALEETRKAIQIKTENLQSERNTRSKAIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G V L ++K+QL E + V + + + IPN+P +EVP G S Sbjct: 61 AKQAG--EDVAPLMQAVESIKQQLVDAEADLARVQTEWDEFVKAIPNIPADEVPEGKSDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G S ++H ++G LG +DFD ATK++G+RF+VL G +A L RAL Q Sbjct: 119 DNVEIRRWGMPRSFHFPIKDHVDLGADLGGLDFDTATKITGSRFAVLRGGIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR--WLIPTSEVSLTN 238 FM+D H ++HGY EV+ P +V ++++GTGQ+PKF +D+F TD R +LIPT+EV LTN Sbjct: 179 FMLDTHINQHGYEEVNIPFIVNRDSLFGTGQLPKFEEDLFKLTDDREFYLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y I+E LP++F +P FRSEAGS GRDTRGM+RQHQF K ELV + + E S Sbjct: 239 IYRDAILEDNQLPIKFVAHSPCFRSEAGSYGRDTRGMIRQHQFEKVELVWLVQPEKSDEA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E +++ AE+IL L+L +R V LC GD+GFSA KTYD+EVW+ QN YREISSCS + Sbjct: 299 LEALVAHAEKILHDLELPHRTVVLCGGDIGFSAAKTYDIEVWVPSQNKYREISSCSNVRD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R+ + + HTLNGSG+AVGR L+A+LENY DGSV IP VLRPYM Sbjct: 359 FQARRMLARFRNKETGKPELLHTLNGSGLAVGRTLLAVLENYQQEDGSVIIPEVLRPYMG 418 Query: 419 NLAVIKK 425 V+ Sbjct: 419 GQEVLAP 425 >gi|196041939|ref|ZP_03109226.1| serine--tRNA ligase [Bacillus cereus NVH0597-99] gi|196027194|gb|EDX65814.1| serine--tRNA ligase [Bacillus cereus NVH0597-99] Length = 424 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFSRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|83588895|ref|YP_428904.1| seryl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|123525300|sp|Q2RMH8|SYS_MOOTA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|83571809|gb|ABC18361.1| seryl-tRNA synthetase [Moorella thermoacetica ATCC 39073] Length = 427 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 201/428 (46%), Positives = 271/428 (63%), Gaps = 3/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +RQ+PE + L +R L E+ L LD + R L+ ++E ++ RRN SA++ + Sbjct: 1 MLDIRVVRQDPEGVARGLARRGLAAGLEHFLELDARRRNLLVEVEGLKNRRNQVSAEVAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L + E++ L+++ V L++ + +PN+P VP G S Sbjct: 61 LKKSGQ--DATELIASMREVGERIKELDEKVRAVEEELRQEMLKLPNIPHASVPDGLSDA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G+ P R H+EI E LG++DF+R K++GARF G A LERAL Sbjct: 119 DNKPVRHWGELPRFKFEPRPHWEIAENLGIVDFERGGKVAGARFVFYRGAGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+DLHT +HGYTE+ P +V +M GTGQ+PKFA+DMF +LIPT+EV +TNL Sbjct: 179 FMLDLHTIKHGYTEIFPPYMVNSASMLGTGQLPKFAEDMFHVEGTDYYLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+ + LP+ + FR+EAG+AGRDTRG++RQHQF K ELV TR EDS+ E Sbjct: 239 YRGEILPGEKLPIYHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPEDSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEE+L+ L L YRVV+LC GDLGFSA KTYDLEVW+ G YREISSCS +F Sbjct: 299 EKLTRDAEEVLQLLGLPYRVVALCAGDLGFSAAKTYDLEVWMPGTACYREISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R+R + + HTLNGSGVAVGR + AILENY DG+V IP L+PYM Sbjct: 359 QARRADIRFRPGPKEKPRLVHTLNGSGVAVGRTVAAILENYQQEDGTVLIPPALKPYMGG 418 Query: 420 LAVIKKEH 427 L I+ E Sbjct: 419 LTSIQPEQ 426 >gi|52078504|ref|YP_077295.1| seryl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52783868|ref|YP_089697.1| seryl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|319648532|ref|ZP_08002747.1| seryl-tRNA synthetase [Bacillus sp. BT1B_CT2] gi|67461715|sp|Q65PL0|SYS_BACLD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|52001715|gb|AAU21657.1| seryl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52346370|gb|AAU39004.1| SerS [Bacillus licheniformis ATCC 14580] gi|317389380|gb|EFV70192.1| seryl-tRNA synthetase [Bacillus sp. BT1B_CT2] Length = 425 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 270/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N E + L R + + LD K R LI K+E+++ +RN S Q+ Sbjct: 1 MLDVKLLRANFEEIKQKLAHRGEDLSDFDQFEELDTKRRELIVKVEELKGKRNEVSQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D L E + E + L++E V SSL K++ IPN+P E VP+G + Sbjct: 61 ALKREKK--DADHLIKEMREVGEDIKKLDEELRTVESSLDKIMLSIPNIPHESVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+ P + H++I + L ++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVEVRKWGELPEFSFEPKPHWDIADQLDILDFERAGKVTGSRFVFYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH E+GYTEV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMLDLHVDEYGYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ + LP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 LHRDEILSADELPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE++L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ QN YREISSCS Sbjct: 299 LEKLTNQAEKVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQNTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+AVGR + A+LENY DGSV IP LRPYM Sbjct: 359 FQARRANIRFRREAKGKPEHVHTLNGSGLAVGRTVAALLENYQQEDGSVIIPKALRPYMG 418 Query: 419 NLAVIKK 425 N VI+ Sbjct: 419 NRDVIQP 425 >gi|308389806|gb|ADO32126.1| seryl-tRNA synthetase [Neisseria meningitidis alpha710] Length = 431 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 276/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLAARGYEFDAARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RR+ +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRLKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|312134746|ref|YP_004002084.1| seryl-tRNA synthetase [Caldicellulosiruptor owensensis OL] gi|311774797|gb|ADQ04284.1| seryl-tRNA synthetase [Caldicellulosiruptor owensensis OL] Length = 420 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 199/424 (46%), Positives = 280/424 (66%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR NPE + L KR+ + IL LDE+ R L+ ++E ++A +N S ++ + Sbjct: 1 MLDLKYIRANPEKVQEGLTKRNKDISIAPILELDERRRKLLAEVESLKALQNQKSKEVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V L NE L +++ L+ EV ++K++ IPN+P E VP+G Sbjct: 61 LKKEGK--DVTELMNELKELSDKIKELDSVVKEVEDEIEKILLTIPNIPHESVPVGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + H+EIG LG++DF+RA+K+SG+RF+ G A LERAL Sbjct: 119 ENVEVRRWGDVRVPDFELKPHWEIGINLGILDFERASKVSGSRFTFYRGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH +HGYTE+ P LV ++M GTGQ+PKF +D F TTD +LIPT+EV +TN + Sbjct: 179 FMLDLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LP+++ + FR+EAG+AG+DTRG++RQHQF K ELV + EDS+ E E Sbjct: 239 REEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 ++ + AE++LK L L YRVV LC+GDLGFS+ KTYD+EVW+ Y EISSCS ++Q Sbjct: 299 KLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFESYQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR N R+R + K L + HTLNGSG+AVGR L AILEN+ DG+V +P VLR YM Sbjct: 359 ARRANIRFRRKDGK-LDYVHTLNGSGLAVGRTLAAILENFQQKDGTVVVPEVLRKYM-GT 416 Query: 421 AVIK 424 VIK Sbjct: 417 DVIK 420 >gi|59711515|ref|YP_204291.1| seryl-tRNA synthetase [Vibrio fischeri ES114] gi|67461597|sp|Q5E6E3|SYS_VIBF1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|59479616|gb|AAW85403.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Vibrio fischeri ES114] Length = 435 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 189/434 (43%), Positives = 267/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E + +L+E+ + L K E+++A+RNS S IGQ Sbjct: 1 MLDSKLLRTELDETAEKLARRGFKLDVETLRNLEEQRKSLQVKTEELQAQRNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ D + + + L +L + E+ ++ + +PN+P + VP+G N Sbjct: 61 AKAKGDHEEADRIMADVANLGSELDEAKAALAELQQQIEDIALSVPNIPDDSVPLGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G + ++H ++GE +DF A K+SG+RF V+ G A L RAL Q Sbjct: 121 ENVEVLRWGTPLAYDFEVKDHVDLGEMADGLDFASAVKISGSRFIVMKGQFARLHRALSQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF +D+F T+ LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNPDSLFGTGQLPKFGEDLFHTSPLTEQVSDVPLKKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + +PL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMVRDTITDEADMPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGSRKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN+ ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENFQQADGKIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VLR YMN + I Sbjct: 421 PQVLRKYMNGVEFI 434 >gi|52145196|ref|YP_081631.1| seryl-tRNA synthetase [Bacillus cereus E33L] gi|67461705|sp|Q63HF6|SYS_BACCZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|51978665|gb|AAU20215.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus cereus E33L] Length = 424 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFNFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|254469216|ref|ZP_05082621.1| seryl-tRNA synthetase [Pseudovibrio sp. JE062] gi|211961051|gb|EEA96246.1| seryl-tRNA synthetase [Pseudovibrio sp. JE062] Length = 426 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 242/424 (57%), Positives = 311/424 (73%), Gaps = 1/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+N E LD AL KR EP++ ++ LD+ R K+++ + RRNS S +IG Sbjct: 1 MLDIKWIRENQESLDAALAKRGQEPRAAQLVELDDARRSHTTKLQEAQQRRNSASKEIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ +G+ +ALK E + +K + E E+ ++ ++L+ ++ IPN+PL+EVP+G Sbjct: 61 AMGQGDKEKAEALKAEVAEIKSFIQNGEDEQRKLNAALEDALAVIPNIPLDEVPVGEDEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+L+ + G+KP +EH+E+GE LG MDF+ A K+SG+RF +L +A LERALGQ Sbjct: 121 DNVLLHTHGEKPELDFEPKEHYELGEKLGGMDFETAAKMSGSRFVILKSQIARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTNL 239 FMIDLHT EHGYTEVS PLLVRD A+YGT Q+PKFA+D F + WLIPT+EV LTN+ Sbjct: 181 FMIDLHTREHGYTEVSPPLLVRDNALYGTSQLPKFAEDQFRDQETGHWLIPTAEVPLTNM 240 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E + LP+R T L FRSEAGSAGRDT GMLRQHQF KCELVS+T E S E Sbjct: 241 VAGETLAEADLPIRVTALTYCFRSEAGSAGRDTAGMLRQHQFQKCELVSVTDENSSLDEL 300 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ERM AE++LK L LHYRVV+LC+GD+GF A KTYD+EVWL GQ+ YREISSCS CG+F Sbjct: 301 ERMRESAEKVLKLLGLHYRVVTLCSGDMGFGARKTYDIEVWLPGQDAYREISSCSVCGDF 360 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q RRMN+RYR K+LKF HTLNGSG+AVGRCLIA++ENY NADG++T+P LRPYMN Sbjct: 361 QGRRMNARYRVEGEKALKFVHTLNGSGLAVGRCLIAVMENYQNADGTITVPEALRPYMNG 420 Query: 420 LAVI 423 L VI Sbjct: 421 LEVI 424 >gi|218895153|ref|YP_002443564.1| seryl-tRNA synthetase [Bacillus cereus G9842] gi|228937319|ref|ZP_04099967.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228963114|ref|ZP_04124285.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228970205|ref|ZP_04130866.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976775|ref|ZP_04137189.1| Seryl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|226701387|sp|B7IS31|SYS_BACC2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|218545743|gb|ACK98137.1| seryl-tRNA synthetase [Bacillus cereus G9842] gi|228782937|gb|EEM31101.1| Seryl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228789506|gb|EEM37424.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228796570|gb|EEM44007.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228822344|gb|EEM68324.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326937809|gb|AEA13705.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 424 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 187/426 (43%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ + E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDFDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|313107648|ref|ZP_07793831.1| seryl-tRNA synthetase [Pseudomonas aeruginosa 39016] gi|310880333|gb|EFQ38927.1| seryl-tRNA synthetase [Pseudomonas aeruginosa 39016] Length = 426 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 194/427 (45%), Positives = 276/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R P+ + L R + I +L+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDPKLVRTQPQEVAARLATRGFQLDVARIEALEEQRKSVQTRTEQLQAERNARSKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L +++ + L ++ IPN+P E VP+G + Sbjct: 61 AKQRG--EDIAPLLADVDRMGSELEEGKRQLDAIQGELDAMLLGIPNLPHESVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF+++ G +A L RAL Q Sbjct: 119 ANVEVRRWGTPKTFDFEVKDHVALGERHGWLDFETAAKLSGARFALMRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSL 236 FMI+LHT+EHGY E P LV+ A+ GTGQ+PKF +D+F +LIPT+EVSL Sbjct: 179 FMINLHTAEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIGRDGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S +I+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I S+ Sbjct: 239 TNIVSGQILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVDPATSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV++LCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAERVLQLLELPYRVLALCTGDMGFGATKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +RYR+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQTRYRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M + VI Sbjct: 419 MAGIEVI 425 >gi|315126413|ref|YP_004068416.1| seryl-tRNA synthetase [Pseudoalteromonas sp. SM9913] gi|315014927|gb|ADT68265.1| seryl-tRNA synthetase [Pseudoalteromonas sp. SM9913] Length = 434 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 199/435 (45%), Positives = 273/435 (62%), Gaps = 12/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++RQ+ E L R E + L+E+ + L K ++++++RN+++ IGQ Sbjct: 1 MLDSKYLRQDVEQTAARLAARGYELDVAAVTELEERRKTLQVKTQELQSQRNASAKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G L + + L +L + E+ EV ++K++ IPN+P E VP G + Sbjct: 61 AKAKG--EDAQPLLDAVANLGSELDAAKTEQDEVLEAIKQIALAIPNLPDESVPAGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I + G ++H ++G+ L +DF+ K+SGARF+V+ G +A + RAL Q Sbjct: 119 DNVEILTWGTPKKYDFEVKDHVDVGQDLNGLDFEMGVKISGARFTVMRGQVARMHRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----------TDGRWLIP 230 +M+D HT ++GYTE+ P LV ++YGT Q+PKFA D+F T G LIP Sbjct: 179 YMLDTHTDKNGYTEMYVPYLVNSASLYGTSQLPKFAGDLFHTLGLVNDDGEQQPGFSLIP 238 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV LTN EI E LP+R T P FRSEAGS GRDTRG++RQHQF K ELV + Sbjct: 239 TAEVPLTNSARDEIYEESDLPIRLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLV 298 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + EDS E + AE+IL+ L+L YR V LC GD+GF A KTYDLEVWL Q+ YREI Sbjct: 299 KPEDSMQALEELTGHAEQILQALELPYRKVILCMGDMGFGAAKTYDLEVWLPAQDTYREI 358 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS +FQ+RRM +R+R +K + HTLNGSG+AVGR L+AILENY ADGSV +P Sbjct: 359 SSCSNMVDFQARRMQARFRREGAKKPELLHTLNGSGLAVGRTLVAILENYQQADGSVVVP 418 Query: 411 TVLRPYMNNLAVIKK 425 VLRPYM L VI K Sbjct: 419 EVLRPYMGGLEVIGK 433 >gi|319783192|ref|YP_004142668.1| seryl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169080|gb|ADV12618.1| seryl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 434 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 238/434 (54%), Positives = 307/434 (70%), Gaps = 8/434 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEY-----ILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI+WIR NP+ L AL KR +++ DE R + +++ + RRN+ S Sbjct: 1 MLDIKWIRDNPKALVEALVKRSWSADEAQSTVGGLIASDEARREHVTELQTKQERRNAAS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG A+ G+ +L + LK E +K + E E E+ +L ++ +PNVP ++VP+ Sbjct: 61 KEIGNAMRSGDAALAETLKAEVGEIKVFIQNGEARERELDKALNDALAVLPNVPFDDVPV 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G ++N++ VGK P+ + +EHFEIGEALG+MDF+RA KLSG+RF+VL LA +E Sbjct: 121 GKDEHDNVVKHIVGKVPTRPNWVKEHFEIGEALGMMDFERAAKLSGSRFTVLKNGLARME 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTS 232 RALGQFM+DLHT+EHGY EV PL+V+D ++GT Q+PKF +D+F T LIPT+ Sbjct: 181 RALGQFMLDLHTTEHGYEEVIPPLMVKDNVLFGTNQLPKFEEDLFFTPHGEGRLGLIPTA 240 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI + LPLR+T L P FRSEAGSAGRDTRGMLRQHQF+K ELVSIT + Sbjct: 241 EVPLTNLVREEITAHEKLPLRYTALTPCFRSEAGSAGRDTRGMLRQHQFYKVELVSITDQ 300 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S EHERM CAEE+LKRL L +R ++LCTGD+GF A KTYD+EVWL GQN YREISS Sbjct: 301 ESSLAEHERMTQCAEEVLKRLGLPFRTMTLCTGDMGFGARKTYDIEVWLPGQNAYREISS 360 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS CG+FQ+RRM++RY+D + K +F HTLNGSG AVGR LIA++ENY N DGSVTIP V Sbjct: 361 CSVCGDFQARRMDARYKDKDGKGNRFVHTLNGSGTAVGRALIAVIENYQNEDGSVTIPEV 420 Query: 413 LRPYMNNLAVIKKE 426 LRPYM L I+ + Sbjct: 421 LRPYMGGLEKIEAK 434 >gi|206978343|ref|ZP_03239217.1| seryl-tRNA synthetase [Bacillus cereus H3081.97] gi|217957593|ref|YP_002336135.1| seryl-tRNA synthetase [Bacillus cereus AH187] gi|222093786|ref|YP_002527834.1| seryl-tRNA synthetase [Bacillus cereus Q1] gi|228983272|ref|ZP_04143487.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229136860|ref|ZP_04265489.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|229153796|ref|ZP_04281928.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|226701626|sp|B7HPS8|SYS_BACC7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783006|sp|B9IYI0|SYS_BACCQ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|206743435|gb|EDZ54868.1| seryl-tRNA synthetase [Bacillus cereus H3081.97] gi|217068054|gb|ACJ82304.1| seryl-tRNA synthetase [Bacillus cereus AH187] gi|221237832|gb|ACM10542.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus cereus Q1] gi|228629665|gb|EEK86360.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228646595|gb|EEL02800.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|228776452|gb|EEM24803.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 424 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKDQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|260891941|ref|YP_003238038.1| seryl-tRNA synthetase [Ammonifex degensii KC4] gi|260864082|gb|ACX51188.1| seryl-tRNA synthetase [Ammonifex degensii KC4] Length = 427 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 269/428 (62%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD+++IR+ PE + AL++R + +L++D + R + ++++R+ N S +I Sbjct: 1 MLDLKFIRRQPEVVKEALRRRGYPENLVDELLAVDARWREKLTYLQELRSEHNRVSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + G+ L L +++ L KE + L++ + IPN+P VP G A Sbjct: 61 RRKQAGD--EAVELIAAMRELSDRIEDLAKEVGALERELQERLLEIPNIPHPSVPYGEDA 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ R H+EIGE G++DF R K++G RF G A LERAL Sbjct: 119 EDNVEVRRWGEPRRFSFPPRPHWEIGEITGVLDFARGVKVAGTRFVFYRGLGAALERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+DLHT EHGY EV P LV E+M GTGQ+PKFA+DMF + +LIPT+EV +TN Sbjct: 179 NFMLDLHTREHGYEEVFPPFLVNRESMVGTGQLPKFAEDMFKVEGEDFYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI++ LPL++ + FR+EAG+AGR+TRG++RQHQF K ELV R E S E Sbjct: 239 LHREEILDGGQLPLKYVAYSACFRAEAGAAGRETRGLIRQHQFNKVELVKFCRPEQSEEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++++ AEE+LKRL L YRVV LCTGDLGF+A KTYD+EVWL Y+EISSCS G+ Sbjct: 299 LEKLVADAEEVLKRLGLPYRVVVLCTGDLGFAAAKTYDIEVWLPSYGAYKEISSCSNFGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR F HTLNGSG+AVGR + AILENY DGSV IP LRPYM Sbjct: 359 FQARRANIRYRPHPKAKAAFVHTLNGSGLAVGRTVAAILENYQEEDGSVVIPPALRPYMG 418 Query: 419 NLAVIKKE 426 + I + Sbjct: 419 GVERIPAQ 426 >gi|168236873|ref|ZP_02661931.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735850|ref|YP_002114015.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238693663|sp|B4TRS5|SYS_SALSV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|194711352|gb|ACF90573.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290153|gb|EDY29510.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 430 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDTLLAEIRNIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E M AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNELEYI 429 >gi|312128024|ref|YP_003992898.1| seryl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311778043|gb|ADQ07529.1| seryl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 420 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 198/424 (46%), Positives = 282/424 (66%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR NPE + L KR+ + IL LDE+ R L+ ++E ++A +N S ++ + Sbjct: 1 MLDLKYIRSNPEKVQEGLSKRNKDISIAPILELDERRRKLLAEVESLKALQNQKSKEVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V L NE L +++ L+ + EV ++K++ IPN+P E VP+G Sbjct: 61 LKKEGK--DVTDLMNELKELSDKIKELDSKVKEVEDEIEKILLTIPNIPHESVPVGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + H+EIG LG++DF+RA+K+SG+RF+ G A LERAL Sbjct: 119 ENVEVRRWGEVREPDFEIKPHWEIGVNLGILDFERASKVSGSRFTFYRGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH +HGYTE+ P LV ++M GTGQ+PKF +D F TTD +LIPT+EV +TN + Sbjct: 179 FMLDLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LP+++ + FR+EAG+AG+DTRG++RQHQF K ELV + EDS+ E E Sbjct: 239 REEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 ++ + AE++LK L L YRVV LC+GDLGFS+ KTYD+EVW+ Y EISSCS ++Q Sbjct: 299 KLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFESYQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR N R+R + K L + HTLNGSG+AVGR L A+LEN+ DG+V +P VLR YM Sbjct: 359 ARRANIRFRRKDGK-LDYVHTLNGSGLAVGRTLAAVLENFQQKDGTVVVPEVLRKYM-GT 416 Query: 421 AVIK 424 VIK Sbjct: 417 DVIK 420 >gi|197334999|ref|YP_002155670.1| seryl-tRNA synthetase [Vibrio fischeri MJ11] gi|238690279|sp|B5FCK7|SYS_VIBFM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|197316489|gb|ACH65936.1| seryl-tRNA synthetase [Vibrio fischeri MJ11] Length = 435 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 190/434 (43%), Positives = 267/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E + +L+E+ + L K E+++A+RNS S IGQ Sbjct: 1 MLDSKLLRTELDETAEKLARRGFKLDVETLRNLEEQRKSLQVKTEELQAQRNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ D + + + L +L + E+ ++ + +PN+P + VP+G N Sbjct: 61 AKAKGDHEEADRIMADVANLGSELDEAKAALAELQQQIEDIALSVPNIPDDSVPLGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G + ++H ++GE +DF A K+SG+RF V+ G A L RAL Q Sbjct: 121 ENVEVLRWGTPLAYDFEVKDHVDLGEMADGLDFASAVKISGSRFIVMKGQFARLHRALSQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF +D+F T+ LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNPDSLFGTGQLPKFGEDLFHTSPLTEQVSDVPLKKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + +PL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMVRDTITDEADMPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 TR EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ Q YRE Sbjct: 301 TRPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGSRKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN+ ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENFQQADGKIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VLR YMN + I Sbjct: 421 PQVLRKYMNGVEFI 434 >gi|206972683|ref|ZP_03233623.1| seryl-tRNA synthetase [Bacillus cereus AH1134] gi|228950564|ref|ZP_04112700.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229067780|ref|ZP_04201099.1| Seryl-tRNA synthetase [Bacillus cereus F65185] gi|229077289|ref|ZP_04209972.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-2] gi|229176616|ref|ZP_04304022.1| Seryl-tRNA synthetase [Bacillus cereus 172560W] gi|206732403|gb|EDZ49585.1| seryl-tRNA synthetase [Bacillus cereus AH1134] gi|228606846|gb|EEK64261.1| Seryl-tRNA synthetase [Bacillus cereus 172560W] gi|228706012|gb|EEL58317.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228715333|gb|EEL67190.1| Seryl-tRNA synthetase [Bacillus cereus F65185] gi|228809107|gb|EEM55590.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 424 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|170726825|ref|YP_001760851.1| seryl-tRNA synthetase [Shewanella woodyi ATCC 51908] gi|238688660|sp|B1KG49|SYS_SHEWM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|169812172|gb|ACA86756.1| seryl-tRNA synthetase [Shewanella woodyi ATCC 51908] Length = 428 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 196/429 (45%), Positives = 268/429 (62%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E +L R E + L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELEATAESLATRGFILDVERLSKLEEKRKSLQVATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V + + L QL + E E+ L + +PN+P PIG + Sbjct: 61 AKAKG--EDVAPIMAQVGDLGSQLDSKKAELAELLEELNAIALSVPNLPDASAPIGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H E+GE LG +DF A K++G+RF ++ G +A + RAL Q Sbjct: 119 ENVEVRRWGTIKEYGFEVKDHVELGETLGGLDFKSAVKITGSRFIIMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV ++++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTETYVPLLVNEDSLMGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTN+ II+ LP++ T P FRSEAGS GRDTRG++RQHQF K ELV + + ED Sbjct: 239 PLTNIARDTIIDEAELPVKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S + + AE++L++L L YR V LCTGD+GF + KT+D+EVWL QN YREISSCS Sbjct: 299 SMAALDALTGHAEKVLEKLGLPYRTVILCTGDMGFGSSKTFDIEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RY+ ++K HTLNGSG+AVGR L+A+LENY N DGS+T+P VLR Sbjct: 359 NMQDFQARRMQARYKAADAKKPALLHTLNGSGLAVGRTLVAVLENYQNEDGSITVPEVLR 418 Query: 415 PYMNNLAVI 423 PYM L I Sbjct: 419 PYMGGLEKI 427 >gi|229015418|ref|ZP_04172422.1| Seryl-tRNA synthetase [Bacillus cereus AH1273] gi|229021624|ref|ZP_04178212.1| Seryl-tRNA synthetase [Bacillus cereus AH1272] gi|228739670|gb|EEL90078.1| Seryl-tRNA synthetase [Bacillus cereus AH1272] gi|228745876|gb|EEL95874.1| Seryl-tRNA synthetase [Bacillus cereus AH1273] Length = 424 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARNWGEVKEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILSKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|261392091|emb|CAX49588.1| seryl-tRNA synthetase (serine--tRNA ligase; SerRS) [Neisseria meningitidis 8013] Length = 431 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 203/433 (46%), Positives = 276/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLAARGYEFDAARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|114767457|ref|ZP_01446244.1| seryl-tRNA synthetase [Pelagibaca bermudensis HTCC2601] gi|114540467|gb|EAU43548.1| seryl-tRNA synthetase [Roseovarius sp. HTCC2601] Length = 430 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 196/429 (45%), Positives = 274/429 (63%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R +EPQS IL +DE+ R I E +A + + +G Sbjct: 1 MHDIRAIRENPAAFDAALSRRGMEPQSPSILKIDEERRAAIHAAETAQADQKKAAKDVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A GN + + L+ K ++ ++ + + L +L+ +PN+P ++VP G + Sbjct: 61 AKASGNEAEFERLRALVGAKKAEVSEMQDRAKALDAQLDELLMGLPNLPFDDVPDGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G + +EH+++ MDF+ A KLSG+RF VL+G + + RAL Q Sbjct: 121 DNVEIHRWGTPATFDFAPKEHYQLAAVQKGMDFETAAKLSGSRFVVLSGGVVRIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G TE P+LVR+E MYGTGQ+PKF +D + T +G WL+PT+EV+LTN+ Sbjct: 181 FMLDTHVEENGLTETWTPVLVREEMMYGTGQLPKFGEDSYQTREGWWLVPTAEVTLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + E +E LP R+ FRSEAGSAGRDT GMLRQHQF K E+VS+T + S E + Sbjct: 241 NGETVEESYLPRRYVAHTQCFRSEAGSAGRDTSGMLRQHQFEKVEMVSVTHPDKSREELD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CA+ IL++L L YR V LCTGD+GF A +T+D+EVWL GQN YREISS S CG+FQ Sbjct: 301 RMTACAQGILEKLGLPYRTVVLCTGDIGFGARRTHDIEVWLPGQNTYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + HTLNGSG+AVGRCLIA+LEN DGSV +P L P++ Sbjct: 361 ARRMNARFKPAGGGKPDYVHTLNGSGLAVGRCLIAVLENGQQEDGSVKLPEALHPWLGGK 420 Query: 421 AVIKKEHIL 429 + + L Sbjct: 421 TTLTADGEL 429 >gi|15597808|ref|NP_251302.1| seryl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|107102134|ref|ZP_01366052.1| hypothetical protein PaerPA_01003183 [Pseudomonas aeruginosa PACS2] gi|116050599|ref|YP_790582.1| seryl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|218891227|ref|YP_002440093.1| seryl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|254235598|ref|ZP_04928921.1| seryl-tRNA synthetase [Pseudomonas aeruginosa C3719] gi|254241045|ref|ZP_04934367.1| seryl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|296388929|ref|ZP_06878404.1| seryl-tRNA synthetase [Pseudomonas aeruginosa PAb1] gi|30173211|sp|Q9I0M6|SYS_PSEAE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|122259722|sp|Q02NA4|SYS_PSEAB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226701396|sp|B7UW10|SYS_PSEA8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|9948677|gb|AAG06000.1|AE004689_12 seryl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|115585820|gb|ABJ11835.1| seryl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|126167529|gb|EAZ53040.1| seryl-tRNA synthetase [Pseudomonas aeruginosa C3719] gi|126194423|gb|EAZ58486.1| seryl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|218771452|emb|CAW27219.1| seryl-tRNA synthetase [Pseudomonas aeruginosa LESB58] Length = 426 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 194/427 (45%), Positives = 276/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R P+ + L R + I +L+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDPKLVRTQPQEVAARLATRGFQLDVARIEALEEQRKSVQTRTEQLQAERNARSKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L +++ + L ++ IPN+P E VP+G + Sbjct: 61 AKQRG--EDIAPLLADVDRMGSELEEGKRQLDAIQGELDAMLLGIPNLPHESVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF+++ G +A L RAL Q Sbjct: 119 ANVEVRRWGTPKTFDFEVKDHVALGERHGWLDFETAAKLSGARFALMRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSL 236 FMI+LHT+EHGY E P LV+ A+ GTGQ+PKF +D+F +LIPT+EVSL Sbjct: 179 FMINLHTAEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIGRDGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S +I+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I S+ Sbjct: 239 TNIVSGQILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVDPATSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV++LCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAERVLQLLELPYRVLALCTGDMGFGATKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +RYR+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M + VI Sbjct: 419 MAGIEVI 425 >gi|152973866|ref|YP_001373383.1| seryl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189083557|sp|A7GJT0|SYS_BACCN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|152022618|gb|ABS20388.1| seryl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 424 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 191/426 (44%), Positives = 273/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + E LD K R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRANFEEVKEKLQHRGEDLADFECFEELDTKRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E EV L++L+ IPN+P E P+G + Sbjct: 61 MLKREKK--DAEALILEMREVGEKIKGLDNELREVEEDLERLMLSIPNIPHESTPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+++R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVVRTWGEVKEFNFEPKPHWDLATDLGIVDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTEEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFLIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ ++ LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ E Sbjct: 239 MHRDEILSAEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVWL + YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWLPSYDTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNAKPEPVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|302871467|ref|YP_003840103.1| seryl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302574326|gb|ADL42117.1| seryl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 420 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 198/424 (46%), Positives = 283/424 (66%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR NPE + L KR+ + IL LDEK R L+ ++E ++A +N S ++ + Sbjct: 1 MLDLKYIRANPEKVQEGLSKRNKDISIAPILELDEKRRKLLAEVESLKALQNQKSKEVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V L NE L +++ L+ + +V ++K++ IPN+P E VP+G Sbjct: 61 LKKEGK--DVTGLMNELKELSDKIKELDSKVKDVEDEIEKILLTIPNIPHESVPVGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + + H+EIG LG++DF+RA+K+SG+RF+ G A LERAL Sbjct: 119 ENVEVRRWGEVREPDFIIKPHWEIGVNLGILDFERASKVSGSRFTFYRGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH +HGYTE+ P LV ++M GTGQ+PKF +D F TTD +LIPT+EV +TN + Sbjct: 179 FMLDLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LP+++ + FR+EAG+AG+DTRG++RQHQF K ELV + EDS+ E E Sbjct: 239 REEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 ++ + AE++L+ L L YRVV LC+GDLGFS+ KTYD+EVW+ Y EISSCS ++Q Sbjct: 299 KLTADAEDVLRELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFESYQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR N R+R + K L + HTLNGSG+AVGR L AILEN+ DG+V +P VLR YM Sbjct: 359 ARRANIRFRRKDGK-LDYVHTLNGSGLAVGRTLAAILENFQQKDGTVVVPEVLRRYM-GT 416 Query: 421 AVIK 424 VIK Sbjct: 417 DVIK 420 >gi|256751428|ref|ZP_05492306.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256749647|gb|EEU62673.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 423 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 201/426 (47%), Positives = 271/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR NPE + IA++ + + + L LDEK R ++ ++E ++ RRN S I + Sbjct: 1 MLDVKRIRNNPEAVRIAIELKGEKADIDRFLELDEKRRQMLVELETLKNRRNVESDNIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG L E L +++ +E+E EV L++++ IPN+P E VPIG S Sbjct: 61 LKREGK--DASDLIAEMKELSDKIKEMEQEVKEVEEELERILWTIPNIPHESVPIGDSDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ + H+EIGE LG++DF+ A +++G+RF+ G A LERAL Sbjct: 119 DNVEIRRWGEPRKFDFEPKPHWEIGEELGILDFEAAARVTGSRFTFYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGYTEV P +V +M+GTGQ+PKF +D F + IPT+EV +TN+ Sbjct: 179 FMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDAFKVYGTDYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y II+ LP+ + FR EAGSAGRDTRG++RQHQF K ELV T + S+ E Sbjct: 239 YRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M AEE+L+ L L YRVV +CTGDLGF+A K YD+EVW+ Y EISSCS C +F Sbjct: 299 EKMTRDAEEVLQALGLPYRVVVICTGDLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR + ++ HTLNGSGVAVGR AILENY DGSV IP VLRPYM Sbjct: 359 QARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYMK- 417 Query: 420 LAVIKK 425 + VIKK Sbjct: 418 VDVIKK 423 >gi|229188301|ref|ZP_04315352.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228595169|gb|EEK52937.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 10876] Length = 424 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDLDYELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|161870532|ref|YP_001599704.1| seryl-tRNA synthetase [Neisseria meningitidis 053442] gi|189083575|sp|A9M1Q6|SYS_NEIM0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|161596085|gb|ABX73745.1| seryl-tRNA synthetase [Neisseria meningitidis 053442] gi|254674222|emb|CBA10006.1| Seryl-tRNA synthetase [Neisseria meningitidis alpha275] Length = 431 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 203/433 (46%), Positives = 276/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLAARGYEFDAARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|228898770|ref|ZP_04063054.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228860862|gb|EEN05238.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 424 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 187/426 (43%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E + +AL E + E++ + E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKKGA--EALILEMREVGEKVKDFDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|222054291|ref|YP_002536653.1| seryl-tRNA synthetase [Geobacter sp. FRC-32] gi|254783028|sp|B9M3Q9|SYS_GEOSF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|221563580|gb|ACM19552.1| seryl-tRNA synthetase [Geobacter sp. FRC-32] Length = 422 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 192/424 (45%), Positives = 268/424 (63%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+N E ++ LK R E LD + R L+++ E ++A RN S +I + Sbjct: 1 MLDVRYIRENLELVETRLKTRGTGIDLERFRQLDSQRRELLQQTETLKALRNKVSEEISR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S E + +++ L++E V +L+ + +PN+P P+G S Sbjct: 61 VK---DKSQAQDRIAEMREVSQRVKGLDEELKGVEEALEYFLLTVPNIPSSATPVGASEA 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+KP + H+EIGE L ++DF+R KL+GARF++ G A LERAL Sbjct: 118 DNVEIRVWGEKPHLDFTPKPHWEIGEDLDILDFERGAKLTGARFTLYKGLGARLERALVN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLHT H Y E+ P +V E+M GTGQ+PKF DD+F + + IPT+EV +TN+ Sbjct: 178 FMLDLHTGRHNYLEMLPPFMVNRESMTGTGQLPKFEDDLFHLGEVDYFLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ LPL +T P FR EAGS G+DTRG++RQHQF K ELV S+ E Sbjct: 238 HRGEILKGSELPLCYTAYTPCFRKEAGSYGKDTRGLIRQHQFNKVELVKFVHPGHSYAEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++L AEE+L+ L L YRVV LCTGD+GFSA +T+D+EVWL GQ+ YREISSCS +F Sbjct: 298 DKLLDNAEEVLRLLKLPYRVVELCTGDIGFSAARTFDIEVWLPGQDCYREISSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R+R+ +F HTLNGSG+AVGR ++AILENY DGSV IP LRPYM Sbjct: 358 QARRASIRFREDEKAKPEFVHTLNGSGLAVGRTVVAILENYQQQDGSVVIPEALRPYMGG 417 Query: 420 LAVI 423 I Sbjct: 418 AEKI 421 >gi|212709769|ref|ZP_03317897.1| hypothetical protein PROVALCAL_00817 [Providencia alcalifaciens DSM 30120] gi|212687580|gb|EEB47108.1| hypothetical protein PROVALCAL_00817 [Providencia alcalifaciens DSM 30120] Length = 430 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 195/431 (45%), Positives = 265/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R E + L+E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRTELDAVATKLARRGFTLDVEKLRELEERRKVLQVETETLQADRNSRSKTIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ ++ + IPN+P +EVP G + Sbjct: 61 AKARG--EDIEPLRLEVNQLGEKLDAAKAELDKLQQEIRDIALSIPNIPDDEVPDGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G+ ++H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 ENLEVSRWGEPRQYDFEVKDHVSLGELAGGLDFPAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E+ P LV +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYQELYVPYLVNHATLYGTGQLPKFGEDLFHTKPLEEEADSSTYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI++ +LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 239 EVPVTNLVRDEILDEDALPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVHP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL QN YREISS Sbjct: 299 EKSMAALEELTGHAEKVLQLLNLPYRKVLLCTGDIGFGSRKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R+R + K + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARFRGKSDKKTQLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|259908927|ref|YP_002649283.1| seryl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|224964549|emb|CAX56061.1| Seryl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] Length = 430 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 268/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + + +E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGYKLDVDTLRAHEERRKVLQVETENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + +S+ IPN+P + VP+G + Sbjct: 61 AKARG--EDIEPLRQEVNALGERLDAAKAELDALLTSINDFSMAIPNIPADVVPLGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN I G R+H E+GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 ENQEIGRWGVPRKFDFTVRDHVELGERAAGLDFAAAVKLTGSRFIVMKGQIALMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV ++YGTGQ+PKF +D+F T LIPTS Sbjct: 179 FMLDLHTEQHGYQETYVPYLVNHASLYGTGQLPKFGEDLFHTRPLDEEASSSNYALIPTS 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLPL+ T P FRSEAG+ GRDTRG++R HQF K E+V +TR Sbjct: 239 EVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFDKVEMVHVTRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E ++ AE++L+ L+L YR V LCTGD+GF A KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R R + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMGDFQARRMKARCRPKGETKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMKGLTFI 429 >gi|30260206|ref|NP_842583.1| seryl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47525268|ref|YP_016617.1| seryl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49183051|ref|YP_026303.1| seryl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|49478185|ref|YP_034372.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65317479|ref|ZP_00390438.1| COG0172: Seryl-tRNA synthetase [Bacillus anthracis str. A2012] gi|118475790|ref|YP_892941.1| seryl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|165873234|ref|ZP_02217845.1| seryl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167635026|ref|ZP_02393343.1| seryl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167641731|ref|ZP_02399974.1| seryl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170688939|ref|ZP_02880141.1| seryl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170707501|ref|ZP_02897954.1| seryl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177655686|ref|ZP_02937011.1| seryl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190569337|ref|ZP_03022229.1| seryl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|196036387|ref|ZP_03103784.1| seryl-tRNA synthetase [Bacillus cereus W] gi|196047691|ref|ZP_03114895.1| seryl-tRNA synthetase [Bacillus cereus 03BB108] gi|218901218|ref|YP_002449052.1| seryl-tRNA synthetase [Bacillus cereus AH820] gi|225862069|ref|YP_002747447.1| seryl-tRNA synthetase [Bacillus cereus 03BB102] gi|227812690|ref|YP_002812699.1| seryl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|228912755|ref|ZP_04076404.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925270|ref|ZP_04088368.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931519|ref|ZP_04094427.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943823|ref|ZP_04106210.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229089148|ref|ZP_04220432.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-42] gi|229119679|ref|ZP_04248942.1| Seryl-tRNA synthetase [Bacillus cereus 95/8201] gi|229159191|ref|ZP_04287217.1| Seryl-tRNA synthetase [Bacillus cereus R309803] gi|229182411|ref|ZP_04309664.1| Seryl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|229194407|ref|ZP_04321212.1| Seryl-tRNA synthetase [Bacillus cereus m1293] gi|229600591|ref|YP_002864668.1| serine--tRNA ligase [Bacillus anthracis str. A0248] gi|254686605|ref|ZP_05150464.1| seryl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254724158|ref|ZP_05185943.1| seryl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254737007|ref|ZP_05194712.1| seryl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254744205|ref|ZP_05201886.1| seryl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254751196|ref|ZP_05203235.1| seryl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|301051753|ref|YP_003789964.1| seryl-tRNA synthetase [Bacillus anthracis CI] gi|46577221|sp|Q81W25|SYS_BACAN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67461763|sp|Q6HPZ8|SYS_BACHK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166200600|sp|A0R891|SYS_BACAH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226701386|sp|B7JJC8|SYS_BACC0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783003|sp|C3P9G2|SYS_BACAA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783004|sp|C3LIY9|SYS_BACAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783005|sp|C1ES19|SYS_BACC3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|30253527|gb|AAP24069.1| serine--tRNA ligase [Bacillus anthracis str. Ames] gi|47500416|gb|AAT29092.1| seryl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49176978|gb|AAT52354.1| seryl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|49329741|gb|AAT60387.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118415015|gb|ABK83434.1| seryl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|164711032|gb|EDR16598.1| seryl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167510285|gb|EDR85688.1| seryl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167529500|gb|EDR92250.1| seryl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170127497|gb|EDS96371.1| seryl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170667163|gb|EDT17924.1| seryl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172080026|gb|EDT65126.1| seryl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190559559|gb|EDV13552.1| seryl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|195991017|gb|EDX54988.1| seryl-tRNA synthetase [Bacillus cereus W] gi|196021476|gb|EDX60179.1| seryl-tRNA synthetase [Bacillus cereus 03BB108] gi|218539339|gb|ACK91737.1| seryl-tRNA synthetase [Bacillus cereus AH820] gi|225785776|gb|ACO25993.1| serine--tRNA ligase [Bacillus cereus 03BB102] gi|227004875|gb|ACP14618.1| serine--tRNA ligase [Bacillus anthracis str. CDC 684] gi|228589063|gb|EEK47076.1| Seryl-tRNA synthetase [Bacillus cereus m1293] gi|228601057|gb|EEK58624.1| Seryl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|228624272|gb|EEK81072.1| Seryl-tRNA synthetase [Bacillus cereus R309803] gi|228663770|gb|EEL19347.1| Seryl-tRNA synthetase [Bacillus cereus 95/8201] gi|228694189|gb|EEL47868.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228815847|gb|EEM62081.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828137|gb|EEM73863.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834384|gb|EEM79923.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846882|gb|EEM91885.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229264999|gb|ACQ46636.1| serine--tRNA ligase [Bacillus anthracis str. A0248] gi|300373922|gb|ADK02826.1| seryl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] gi|324324006|gb|ADY19266.1| seryl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 424 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|260914213|ref|ZP_05920686.1| serine-tRNA ligase [Pasteurella dagmatis ATCC 43325] gi|260631846|gb|EEX50024.1| serine-tRNA ligase [Pasteurella dagmatis ATCC 43325] Length = 429 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 204/431 (47%), Positives = 271/431 (62%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ + + L+E+ + L K E ++A RN+ S IG Sbjct: 1 MIDPNILRSNLVEVAEKLKVKRNFDLDVALLSELEEQRKSLQVKTETLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A A G + +L E + +L + + +V + + ++ IPN+P +EVP+G Sbjct: 61 KAKASG--EDISSLLAEVDDMGIELSTTKAKLDDVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G ++H +GE L +DF KLSG+RF+V+ G +A L RAL Sbjct: 119 SENLEVSRWGTPKKFDFEVKDHVTLGENLQGLDFSAGAKLSGSRFAVMKGQIAKLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----DGRWLIPTSEV 234 QFM+DLHT EHGYTE P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTQEHGYTEAYVPYLVNHATLYGTGQLPKFGEDLFHTNALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL EI++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I E Sbjct: 239 PVTNLVRDEILDESELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVAPET 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVWL QN YREISSCS Sbjct: 299 SMEALEELTGQAEKVLQLLELPYRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+PTVLR Sbjct: 359 NMWDFQARRMQARYRNKGDKKPRLVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPTVLR 418 Query: 415 PYMNNLAVIKK 425 PYMN + VI K Sbjct: 419 PYMNGIEVIGK 429 >gi|319655041|ref|ZP_08009111.1| seryl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317393265|gb|EFV74033.1| seryl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 425 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 193/427 (45%), Positives = 265/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD K R LI + E ++++RN S Q+ Sbjct: 1 MLDIKFLRANFEEVKNKLQHRGEDLTDLGKFEDLDVKRRELIVEAEQLKSKRNEVSQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D L E + ++ L++E V L +L+ IPN+P E VP+G + Sbjct: 61 ALKREKQ--DADHLIAEMREVGGKIKALDEELRTVEEELDQLLLSIPNIPHESVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + H+++ L L+DF+RA+K++G+RF G A LERAL Sbjct: 119 DDNVEIRKWGEVREFDFEPKPHWDVATDLDLLDFERASKVTGSRFVFYKGLGARLERALF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMLDLHTDEHGYKEVLPPYMVNRTSMTGTGQLPKFEEDAFLIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ E Sbjct: 239 MHREEILNADELPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE++L+ L L YRV+S+CTGDLGF+A K YD+EVW+ N YREISSCS Sbjct: 299 LEKLTGHAEKVLQMLGLPYRVMSMCTGDLGFTAAKKYDIEVWIPSYNTYREISSCSNFEG 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+A+GR + AILENY ADGSV IP VLRPYM Sbjct: 359 FQARRANIRFRREAKGKPEHVHTLNGSGLAIGRTVAAILENYQQADGSVIIPEVLRPYMG 418 Query: 419 NLAVIKK 425 N VIK Sbjct: 419 NREVIKP 425 >gi|228905813|ref|ZP_04069712.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228853821|gb|EEM98579.1| Seryl-tRNA synthetase [Bacillus thuringiensis IBL 200] Length = 424 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 187/426 (43%), Positives = 266/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ + E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDFDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVEARTWGEVKEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|293398677|ref|ZP_06642855.1| seryl-tRNA synthetase [Neisseria gonorrhoeae F62] gi|291611148|gb|EFF40245.1| seryl-tRNA synthetase [Neisseria gonorrhoeae F62] Length = 431 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 201/433 (46%), Positives = 276/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPPGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSC Sbjct: 300 KSYGALEEMVGHAENILKALELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+ RM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQAHRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM + ++ + Sbjct: 419 QPYMGGVTKLEVK 431 >gi|146307407|ref|YP_001187872.1| seryl-tRNA synthetase [Pseudomonas mendocina ymp] gi|166223271|sp|A4XUX4|SYS_PSEMY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|145575608|gb|ABP85140.1| seryl-tRNA synthetase [Pseudomonas mendocina ymp] Length = 426 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 270/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L R +L+ + + + + E ++A RNS S IGQ Sbjct: 1 MLDSKLVRTQLTEIAERLATRGFALDVARFEALESQRKSVQVRTEQLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E + L ++E + + L L+ IPN+P E VP+G + Sbjct: 61 AKARG--EDIAPLLAEVDQMGSDLEAGKRELDAIQNELDNLLLNIPNLPHESVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ + G S ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVARWGTPRSFDFEIKDHVALGEQHGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LHT EHGY E P LV+ A+ GTGQ+PKF +D+F +LIPT+EVSL Sbjct: 179 FMINLHTGEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIRREDQADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ + EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I SF Sbjct: 239 TNIVAGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSF 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E M + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGMTAHAERVLQLLELPYRKLALCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +RYR+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M + VI Sbjct: 419 MGGIEVI 425 >gi|292670501|ref|ZP_06603927.1| serine-tRNA ligase [Selenomonas noxia ATCC 43541] gi|292647911|gb|EFF65883.1| serine-tRNA ligase [Selenomonas noxia ATCC 43541] Length = 423 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 196/425 (46%), Positives = 274/425 (64%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + + LK R LDE+ R +++ +E+ +ARRN+ S +IG Sbjct: 1 MLDMKFVRENLDAVRTMLKNRCNALDLSSFTELDERRRAILQDVEEKKARRNAVSKEIGV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G DA E L +++ L+++ +V L++L+ IPN+P +VPIG Sbjct: 61 RKKAG--ESADAAVAEMRELGDEIAALDEDLRDVELKLRELLLQIPNMPKADVPIGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G + + H++IGE LG++D +RA K++GARF G A LERA Sbjct: 119 ENPEVRRWGTPRTFDFEPQAHWDIGEKLGVLDAERAAKVTGARFMFYKGLGARLERACIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNL 239 FM+DLH +HGYTE+ AP +V +++M GTGQ+PKFA+DMF +L+PT+EV TN Sbjct: 179 FMMDLHAEKHGYTEMLAPYIVNEDSMIGTGQLPKFAEDMFKLDGLDYYLVPTAEVPTTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+E++ LP +T+ FR+EAGSAGRDTRG++RQHQF K EL+ E S+ E Sbjct: 239 HRDEILEAEQLPEYYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVTPETSWDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ERM+ AE++LK L+L YRV+ LCTGD+ F++ KTYDLEVW+ QN YREISSCS C ++ Sbjct: 299 ERMVEAAEDVLKILELPYRVIQLCTGDMSFTSAKTYDLEVWMPAQNKYREISSCSNCTDY 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR F HTLNGSGVAVGR + AILEN ADGSV +P L PYM Sbjct: 359 QARRANIKYRPERGAKPAFLHTLNGSGVAVGRTVAAILENNQQADGSVLVPKALVPYMGG 418 Query: 420 LAVIK 424 + VI+ Sbjct: 419 VTVIR 423 >gi|254805440|ref|YP_003083661.1| Seryl-tRNA synthetase [Neisseria meningitidis alpha14] gi|254668982|emb|CBA07314.1| Seryl-tRNA synthetase [Neisseria meningitidis alpha14] gi|325127114|gb|EGC50069.1| seryl-tRNA synthetase [Neisseria meningitidis N1568] Length = 431 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 277/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYNFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E+VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLEAVQKELDAWLLSIPNLPHEDVPFGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|83954200|ref|ZP_00962920.1| seryl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] gi|83841237|gb|EAP80407.1| seryl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] Length = 430 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 208/429 (48%), Positives = 281/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP+ D AL +R P S +L+LDE R I E +A +N S +G Sbjct: 1 MHDIKAIRENPDAFDAALARRGDTPVSAQVLALDEARRAKISAAETAQAEQNKASKLVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ S K ++ ++ E ++ + L +++ IPN+P ++ P G Sbjct: 61 AKAKGDEAEFERLRTLVSDKKAEVTAMQAEAKDLDAQLTDMLARIPNLPADDAPDGADEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G P+ ++EHFEI MDF+ A K SGARF +L G +A + RAL Q Sbjct: 121 DNVEVNRWGDVPAFDFKAKEHFEIASVAASMDFETAAKTSGARFVMLKGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID H E+G TE P+LVRDEAMYGT ++PKF DD + TT+G WLIPTSEV+LT Sbjct: 181 FMIDTHVDENGLTEHMTPVLVRDEAMYGTDKLPKFGDDSYQTTNGWWLIPTSEVTLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +++E +LP R T FRSEAGSAGRDT GMLRQHQF K E+VS+T + S E + Sbjct: 241 AGDVLEEAALPRRMTAHTLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSVTHPDQSDDEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE++L+RL + YR V LCTGD+GF A +T+D+E WL GQN YREISS ST G+FQ Sbjct: 301 RMLRCAEDMLERLGVPYRTVILCTGDMGFGARRTFDIEAWLPGQNAYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ N +F HTLNGSG+AVGRCLIA+LEN ADGSV +P VL PY+ Sbjct: 361 ARRMNARFKPANGGKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVRLPDVLAPYLGGK 420 Query: 421 AVIKKEHIL 429 + + L Sbjct: 421 TTLGVDGTL 429 >gi|332535764|ref|ZP_08411506.1| seryl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332034832|gb|EGI71366.1| seryl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 434 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 195/436 (44%), Positives = 271/436 (62%), Gaps = 12/436 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++RQ+ E L R E + +L+EK + L K ++++++RN+++ IGQ Sbjct: 1 MLDSKFLRQDIEQTAARLAARGYELDVATVTALEEKRKTLQVKTQELQSQRNASAKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G L + + L +L + E+ EV +++ + IPN+P E VP G + Sbjct: 61 AKAKG--EDAQPLLDAVANLGSELDAAKTEQDEVLAAINDIALAIPNLPDESVPAGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I + G ++H ++G+ L +DF+ K+SGARF+V+ G +A + RAL Q Sbjct: 119 DNVEILTWGTPKKFDFEVKDHVDVGQDLNGLDFEMGVKISGARFTVMRGQVARMHRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----------TDGRWLIP 230 FM+D H ++GYTE+ P LV ++YGT Q+PKFA D+F T G LIP Sbjct: 179 FMLDTHADKNGYTEMYVPYLVNSASLYGTSQLPKFAGDLFHTLGLVNDDGEQQAGFSLIP 238 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV LTN EI + LP+R P FRSEAGS GRDTRG++RQHQF K ELV + Sbjct: 239 TAEVPLTNSARDEIYDESDLPIRLVAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLV 298 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + EDS E + AE+IL+ L+L YR V LC GD+GF + KTYDLEVWL Q+ YREI Sbjct: 299 KPEDSMATLEELTGHAEQILQALELPYRKVILCMGDMGFGSAKTYDLEVWLPAQDTYREI 358 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS +FQ+RRM +R+R K + HTLNGSG+AVGR L+AILENY ADG+V +P Sbjct: 359 SSCSNMADFQARRMQARFRREGVKKPELLHTLNGSGLAVGRTLVAILENYQQADGTVVVP 418 Query: 411 TVLRPYMNNLAVIKKE 426 VLRPYM L VI K+ Sbjct: 419 EVLRPYMGGLEVIGKQ 434 >gi|197116508|ref|YP_002136935.1| seryl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|238690859|sp|B5E8F6|SYS_GEOBB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|197085868|gb|ACH37139.1| seryl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 422 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 271/424 (63%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR+N E ++ LK R LD + R L+++ E ++A RN + +I + Sbjct: 1 MLDARYIRENLETVEARLKTRGEGVDIALFKELDGRRRELLQQSETLKALRNKVTEEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S K E + +Q+ +++ V L+ + +PNVP E PIG S Sbjct: 61 L---QDKSQAAERKTEMREVSQQIKGIDESLRSVEEELQNFLLTVPNVPNETTPIGKSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+++R+ G+ P+ + H+EIGE LG++DF+R KL+GARF++ G A LERAL Sbjct: 118 DNVVVRTWGEVPTLSFEPKPHWEIGEGLGILDFERGAKLAGARFTLYRGAGARLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSLTNL 239 +M+DLHT EH Y E+ P +V E M GTGQ+PKF +D+ +LIPT+EV +TN+ Sbjct: 178 YMLDLHTDEHKYIEMLPPFMVNRECMTGTGQLPKFEEDLFHMEGVDFFLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ LP+ + P FR EAGS G+DTRG++RQHQF K ELV T EDS+ + Sbjct: 238 HRGEILKGSDLPISYVAYTPCFRKEAGSYGKDTRGLIRQHQFNKVELVKFTSPEDSYQQL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++L AEE+L+RL + YRVV LCTGD+GFSA KT+D+EVWL GQN YREISSCS +F Sbjct: 298 QKLLGHAEEVLRRLQIPYRVVELCTGDIGFSAAKTFDIEVWLPGQNCYREISSCSCFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R+R +F HTLNGSG+AVGR L+A+LENY ADGSV IP VLRPYM Sbjct: 358 QARRAGIRFRPEEKAKPEFVHTLNGSGLAVGRTLVAVLENYQQADGSVLIPEVLRPYMGG 417 Query: 420 LAVI 423 I Sbjct: 418 AERI 421 >gi|312876134|ref|ZP_07736122.1| seryl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311797120|gb|EFR13461.1| seryl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 420 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 199/424 (46%), Positives = 281/424 (66%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR NPE + L KR+ + IL LDEK R L+ ++E ++A +N S ++ + Sbjct: 1 MLDLKYIRANPEKVQGGLSKRNKDISIAPILELDEKRRKLLAEVESLKALQNQKSKEVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V L NE L +++ L+ EV ++K++ IPN+P E VP+G Sbjct: 61 LKKEGK--DVTELMNELKELSDKIKELDSRVKEVEDEIEKILLTIPNIPHESVPVGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + H+EIG +LG++DF+RA+K+SG+RF+ G A LERAL Sbjct: 119 ENVEVRRWGDVRVPDFEVKPHWEIGMSLGILDFERASKVSGSRFTFYRGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH +HGYTE+ P LV ++M GTGQ+PKF +D F TTD +LIPT+EV +TN + Sbjct: 179 FMLDLHIEKHGYTEIFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LP+++ + FR+EAG+AG+DTRG++RQHQF K ELV + EDS+ E E Sbjct: 239 REEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 ++ + AE++LK L L YRVV LC+GDLGFS+ KTYD+EVW+ Y EISSCS ++Q Sbjct: 299 KLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFESYQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR N R+R + K L + HTLNGSG+AVGR + AILEN+ DG+V +P VLR YM Sbjct: 359 ARRANIRFRRKDGK-LDYVHTLNGSGLAVGRTVAAILENFQQKDGTVVVPEVLRKYM-GT 416 Query: 421 AVIK 424 VIK Sbjct: 417 DVIK 420 >gi|260655870|ref|ZP_05861339.1| serine--tRNA ligase [Jonquetella anthropi E3_33 E1] gi|260629486|gb|EEX47680.1| serine--tRNA ligase [Jonquetella anthropi E3_33 E1] Length = 430 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 188/429 (43%), Positives = 268/429 (62%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR+ + + LK RH + IL+LD + R ++ + E+++ARRN S + Sbjct: 1 MLDLKVIREQTDQVRAWLKARHSTVDLDAILALDGQRRDILGQSEELKARRNEGSKAVAM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + AL + L EQ+ L+ + +V + + + + IPN E VP+G Sbjct: 61 AKKSG--ADAAALMEKMKELGEQVKELDDKLADVDTEIGRKLLEIPNKLHETVPLGADER 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + H++IGE G +D +R KL+G+RF+VL+G A LERA+ Sbjct: 119 ENVEVRRWGEPKKFSFEPKAHWDIGELTGTIDSERGVKLAGSRFTVLSGLGARLERAMAN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSL 236 +M+DLH + GYTE + PL+V E M GTGQ+PKFA+D++ WLIPT+EV L Sbjct: 179 YMLDLHCLKQGYTEYNVPLMVSTETMTGTGQLPKFAEDLYKIGGDDDVPLWLIPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL+S E + LP+ T P FR EAGS G+D RG++R HQF K E+V + E S+ Sbjct: 239 TNLHSGETLSEDDLPMYMTAYTPCFRREAGSYGKDVRGIMRLHQFDKVEMVKLCTPETSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE +L+ L L YRV+ LC+GD+GF + KTYD+EVWL QN YREISSCS C Sbjct: 299 DELEKLTADAESVLQGLGLPYRVIVLCSGDIGFGSAKTYDVEVWLPSQNCYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RRMN RYR L++ H+LNGSG+A+GR ++A++ENY DGSV IP L PY Sbjct: 359 EDFQTRRMNCRYRPAGGGKLRYPHSLNGSGLAIGRAVLAVIENYQQEDGSVVIPDALVPY 418 Query: 417 MNNLAVIKK 425 M + VI Sbjct: 419 MGGVKVIPP 427 >gi|172056058|ref|YP_001812518.1| seryl-tRNA synthetase [Exiguobacterium sibiricum 255-15] gi|229559948|sp|B1YGC4|SYS_EXIS2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|171988579|gb|ACB59501.1| seryl-tRNA synthetase [Exiguobacterium sibiricum 255-15] Length = 425 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 190/426 (44%), Positives = 275/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ +RQ+ + + L R + ++LDEK R LI K E ++A RN + +I Sbjct: 1 MIDIKRLRQDFDAIQEKLAHRGEDLTDMNRFIALDEKRRELIAKTEVLKAERNEATKKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D + +++ L++E EV ++L L+ IPN+P + VPIG++ Sbjct: 61 ELKR--NKENADEAIAAMRQVGDEVKALDEELREVEATLNLLLLGIPNIPHDSVPIGSTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++IR VG KP+ + H+++ E L ++D +RA K++G+RF G A LERAL Sbjct: 119 DDNVVIREVGDKPAFDFEAVPHWDLMEQLKIVDVERAGKVTGSRFVFYRGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH ++GYTE+ PL+V ++M GTGQ+PKF +D F D + +PT+EV +TN Sbjct: 179 NFMMDLHQDKNGYTEILPPLMVNRDSMTGTGQLPKFEEDAFKVEDTNYFLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ + Sbjct: 239 MHRDEILSADQLPIGYAAYSQCFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEESYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AEE+LK L L Y+V+S+CT DLGF+A K YD+EVW+ Q +YREISSCS + Sbjct: 299 LELLTGQAEEVLKLLKLPYQVLSMCTADLGFTAAKKYDIEVWMPSQGVYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R+R + +F HTLNGS +AVGR + AILENY ADGSV IP VLRPYM Sbjct: 359 FQARRAQIRFRREANAKPEFVHTLNGSALAVGRTVAAILENYQQADGSVVIPEVLRPYMG 418 Query: 419 NLAVIK 424 L VI+ Sbjct: 419 GLEVIQ 424 >gi|329298236|ref|ZP_08255572.1| seryl-tRNA synthetase [Plautia stali symbiont] Length = 430 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 196/431 (45%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + SL+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDTLRSLEERRKVLQVETENLQAERNSRSKFIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ +PN+P +EVP+G + Sbjct: 61 AKARG--EDIEPLRQEVNALGERLDAAKAELDTLQNEIRDFALALPNLPADEVPLGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN + G+ ++H E+GEA+ +DF A KL+G+RF V+ G +A L RAL Q Sbjct: 119 ENQEVSRWGQPRQFDFPVKDHVELGEAVKGLDFASAVKLTGSRFIVMQGQIARLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FMIDLH+ +HGY E P LV E +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMIDLHSQQHGYLETYVPYLVNHETLYGTGQLPKFGEDLFHTKPLGEEAGSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLP++ T P FRSEAGS GRDTRG++R HQF K E+V I Sbjct: 239 EVPLTNLVRDEIVEEESLPIKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVAP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E ++ AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL Q+ YREISS Sbjct: 299 ETSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R K + HTLNGSG+AVGR L+A+LE Y ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRSKTDKKPRLVHTLNGSGLAVGRTLVAVLEKYQQADGRIAVPDV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLEYI 429 >gi|325130726|gb|EGC53464.1| seryl-tRNA synthetase [Neisseria meningitidis OX99.30304] gi|325136667|gb|EGC59267.1| seryl-tRNA synthetase [Neisseria meningitidis M0579] gi|325201659|gb|ADY97113.1| seryl-tRNA synthetase [Neisseria meningitidis M01-240149] gi|325208606|gb|ADZ04058.1| seryl-tRNA synthetase [Neisseria meningitidis NZ-05/33] Length = 431 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 277/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLAARGYKFDAARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E+VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLEAVQKELDAWLLSIPNLPHEDVPFGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|292487821|ref|YP_003530696.1| seryl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|292899049|ref|YP_003538418.1| seryl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291198897|emb|CBJ46007.1| seryl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291553243|emb|CBA20288.1| Seryl-tRNA synthetase [Erwinia amylovora CFBP1430] Length = 430 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 200/431 (46%), Positives = 267/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + + +E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGYKLDVDTLRAHEERRKVLQVETENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + +S+ IPN+P + VP G + Sbjct: 61 AKARG--EDIEPLRQEVNALGERLDAAKAELDTLLTSINDFSMAIPNIPADVVPPGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN I G R+H E+GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 ENQEISRWGVPRKFDFTVRDHVELGERAAGLDFAAAVKLTGSRFIVMKGQIALMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV ++YGTGQ+PKF +D+F T LIPTS Sbjct: 179 FMLDLHTEQHGYQETYVPYLVNHASLYGTGQLPKFGEDLFHTRPLDEEASSSNYALIPTS 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLPL+ T P FRSEAG+ GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFDKVEMVHITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E ++ AE++L+ L+L YR V LCTGD+GF A KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R R + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMGDFQARRMKARCRPKGESKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMKGLTFI 429 >gi|326390337|ref|ZP_08211896.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325993614|gb|EGD52047.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 423 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 200/426 (46%), Positives = 271/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR NPE + A++ + + + L LDEK R ++ ++E ++ RRN S I + Sbjct: 1 MLDVKRIRNNPEAVRRAVELKGEKADIDRFLELDEKRRQMLVELETLKNRRNVESDNIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG L E L +++ +E+E EV L++++ IPN+P E VPIG S Sbjct: 61 LKREGK--DASDLIAEMKELSDKIKEMEQEVKEVEEELERILWTIPNIPHESVPIGDSDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ + H+EIGE LG++DF+ A +++G+RF+ G A LERAL Sbjct: 119 DNVEIRRWGEPRKFDFEPKPHWEIGEELGILDFEAAARVTGSRFTFYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGYTEV P +V +M+GTGQ+PKF +D F + IPT+EV +TN+ Sbjct: 179 FMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDAFKVYGTDYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y II+ LP+ + FR EAGSAGRDTRG++RQHQF K ELV T + S+ E Sbjct: 239 YRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M AEE+L+ L L YRVV++CTGDLGF+A K YD+EVW+ Y EISSCS C +F Sbjct: 299 EKMTRDAEEVLQALGLPYRVVAICTGDLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR + ++ HTLNGSGVAVGR AILENY DGSV IP VLRPYM Sbjct: 359 QARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYMK- 417 Query: 420 LAVIKK 425 + VIKK Sbjct: 418 VDVIKK 423 >gi|218768704|ref|YP_002343216.1| seryl-tRNA synthetase [Neisseria meningitidis Z2491] gi|30173212|sp|Q9JT77|SYS_NEIMA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|121052712|emb|CAM09055.1| seryl-tRNA synthetase [Neisseria meningitidis Z2491] gi|319410937|emb|CBY91332.1| seryl-tRNA synthetase (serine-tRNA ligase; SerRS) [Neisseria meningitidis WUE 2594] Length = 431 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 201/433 (46%), Positives = 277/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G ++ + +K L + V L + IPN+P E+VP G Sbjct: 61 LKGQGKHEEAQVAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHEDVPFGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|317047549|ref|YP_004115197.1| seryl-tRNA synthetase [Pantoea sp. At-9b] gi|316949166|gb|ADU68641.1| seryl-tRNA synthetase [Pantoea sp. At-9b] Length = 430 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 195/431 (45%), Positives = 267/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + E + S +E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVETLRSHEERRKVLQVETENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ +PN+P +EVP+G Sbjct: 61 AKARG--EDIEPLRQEVNVLGERLDAAKAELDALQNEIRDFALALPNLPADEVPLGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G+ ++H E+GE +DF A KL+G+RF V+ G +A L RAL Q Sbjct: 119 ENLEVARWGEPRQFDFQVKDHVELGELAKGLDFASAVKLTGSRFVVMQGQIARLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FMIDLHT +HGY E P LV + +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMIDLHTQQHGYLETYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLDEEAGSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E ++LP++ T P FRSEAGS GRDTRG++R HQF K E+V I Sbjct: 239 EVPLTNLVRDEIVEEENLPIKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVAP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E ++ AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL QN YREISS Sbjct: 299 ETSMQALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGSTKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRSKTEKKPRLLHTLNGSGLAVGRTLVAVLENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM + I Sbjct: 419 LRPYMGGIEFI 429 >gi|228989226|ref|ZP_04149220.1| Seryl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228995409|ref|ZP_04155080.1| Seryl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|229003023|ref|ZP_04160881.1| Seryl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228758223|gb|EEM07410.1| Seryl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228764335|gb|EEM13211.1| Seryl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228770501|gb|EEM19071.1| Seryl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 424 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRANFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ + E V L++L+ IPN+P E PIG + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDFDNELRIVEEDLERLMLSIPNIPHESAPIGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFNFEPKPHWDLATDLGILDFERAAKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ S+ LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILSSEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLGLPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + A+LENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNAKPEPVHTLNGSGLAIGRTVAAVLENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|294636937|ref|ZP_06715263.1| serine--tRNA ligase [Edwardsiella tarda ATCC 23685] gi|291089855|gb|EFE22416.1| serine--tRNA ligase [Edwardsiella tarda ATCC 23685] Length = 430 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 194/431 (45%), Positives = 263/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + + + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRNELDAVAEKLARRGYKLDVDTLRQQEERRKVLQVETESLQAERNSRSKSIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRREVNELGEKLDAAKAELDQLQQEIRDLALSIPNLPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ R+H +GE +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNLEVSRWGEPRHYDFEVRDHVTLGEMADGLDFAAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV + +YGTGQ+PKF D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYLETYVPYLVNHDTLYGTGQLPKFGADLFHTRPLEEEADSSTYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I R Sbjct: 239 EVPVTNLVRGEILDESELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSSKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +RYR K + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARYRSKEDKKPRLLHTLNGSGLAVGRTLVAVMENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|163731955|ref|ZP_02139402.1| seryl-tRNA synthetase [Roseobacter litoralis Och 149] gi|161395409|gb|EDQ19731.1| seryl-tRNA synthetase [Roseobacter litoralis Och 149] Length = 430 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 210/429 (48%), Positives = 285/429 (66%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R P S+ IL+LD R I E+ +A +N S ++GQ Sbjct: 1 MHDIRAIRENPAAFDAALARRGEAPMSQAILALDTARRAKINAAENAQAEQNKASKEVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ S K + ++ + + + L + +S I N+P ++VP G + Sbjct: 61 AKAKGDEATFEQLRALVSEKKALIAQMQADAKTLDAELTEKLSWIANIPADDVPDGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G P +EH+EIG MDFD A K SGARF +L G +A + RAL Q Sbjct: 121 DNVEVRRWGHLPDFEFTPKEHYEIGGVAASMDFDTAAKTSGARFVMLKGAVARIHRALSQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID H +G TE+++P+LVRD+AMYGT ++PKFA+D + TT+G WL+ TSE+ LT Sbjct: 181 FMIDTHVDHNGLTEINSPVLVRDDAMYGTDKLPKFAEDSYQTTNGWWLVSTSEIPLTYTV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I+++ +LP+R T FRSEAGSAGRDT GMLRQHQF K E+VSIT + S E + Sbjct: 241 AGDILDAAALPIRMTAHTLCFRSEAGSAGRDTAGMLRQHQFEKVEMVSITEPDQSEAEQQ 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE+IL+RL L YR V LCTGD+GF A +T+D+E WL GQN YREISS ST G+FQ Sbjct: 301 RMLRCAEDILERLGLPYRTVLLCTGDMGFGARRTFDIEAWLPGQNNYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RY+ + +F HTLNGSG+AVGRCLIA+LEN ADGSV +P VL Y+ Sbjct: 361 ARRMNARYKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVVLPPVLASYLGGK 420 Query: 421 AVIKKEHIL 429 V+ E L Sbjct: 421 TVLSAEGTL 429 >gi|325204646|gb|ADZ00100.1| seryl-tRNA synthetase [Neisseria meningitidis M01-240355] Length = 431 Score = 438 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 275/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLAARGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A + + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMVQVAQIKTDLEQTAADLEAVQKELDAWLLSIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYETLEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEVK 431 >gi|312171939|emb|CBX80196.1| Seryl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158] Length = 430 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 200/431 (46%), Positives = 267/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + + +E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGYKLDVDTLRAHEERRKVLQVETENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + +S+ IPN+P + VP G + Sbjct: 61 AKARG--EDIEPLRQEVNALGERLDAAKAELDTLLTSINDFSMAIPNIPADVVPAGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN I G R+H E+GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 ENQEISRWGVPRKFDFTVRDHVELGERAAGLDFAAAVKLTGSRFIVMKGQIALMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV ++YGTGQ+PKF +D+F T LIPTS Sbjct: 179 FMLDLHTEQHGYQETYVPYLVNHASLYGTGQLPKFGEDLFHTRPLDEEASSSNYALIPTS 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLPL+ T P FRSEAG+ GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFDKVEMVHITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E ++ AE++L+ L+L YR V LCTGD+GF A KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R R + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMGDFQARRMKARCRPKGESKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMKGLTFI 429 >gi|89073400|ref|ZP_01159924.1| seryl-tRNA synthetase [Photobacterium sp. SKA34] gi|89050887|gb|EAR56361.1| seryl-tRNA synthetase [Photobacterium sp. SKA34] Length = 435 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 193/434 (44%), Positives = 266/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R E + +L+EK + L K E+++A+RNS S IGQ Sbjct: 1 MLDSKLLRTELDETAEKLARRGFNLDVETLRNLEEKRKSLQVKTEELQAQRNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + E L +L +K E+ + L + +PN+P + VP G + Sbjct: 61 AKAKGDHEEAERIMAEVGNLGSELDDAKKALAELQAELDVITQSVPNIPDDSVPAGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ I G+ + ++H ++GE G +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 ENVEISRWGEPKAYDFDVKDHVDLGEMAGGLDFASAVKITGARFIVMKGRFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF +D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTQPLTEKVNDEEPRVLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMMRDTITDEADLPVKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF ACKTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGACKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN +DG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELLHTLNGSGLAVGRTMVAILENNQQSDGRIEI 420 Query: 410 PTVLRPYMNNLAVI 423 P VLR YMN + I Sbjct: 421 PEVLRKYMNGMTHI 434 >gi|139438647|ref|ZP_01772131.1| Hypothetical protein COLAER_01130 [Collinsella aerofaciens ATCC 25986] gi|133775727|gb|EBA39547.1| Hypothetical protein COLAER_01130 [Collinsella aerofaciens ATCC 25986] Length = 436 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 195/426 (45%), Positives = 279/426 (65%), Gaps = 2/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R+NP+ +D+A+ R E LD++ R +I ++E+++A RN+ S +IG Sbjct: 10 MLDIKFVRENPDAIDVAMANRQTSWDREKFFELDDERRAVITEVEELQATRNAESKKIGA 69 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + EG +A K + E++ L + + ++ +PN+P E P G + Sbjct: 70 LMKEGKKDEAEAAKEAVRAVNEKIDGLAERRTALEQEQYDFMAHLPNIPCEATPYGKDED 129 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ENI R G + H+++G L ++DF+R KLSG+RF+VL G A LERAL Sbjct: 130 ENIERRRWGTPREFDFDFKPHWDLGTDLDILDFERGNKLSGSRFTVLGGAGARLERALIN 189 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 F +D HT G+ E P++V+ + M+GTGQ+PKF DD + + +LIPT+EV LTNL+ Sbjct: 190 FFLDTHT-SRGFKEWWPPIVVKRQTMFGTGQLPKFEDDAYHVSGDNFLIPTAEVVLTNLH 248 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + E++++ +LP R+T P FR EAGSAGRDTRG++RQH+F K E+V + E+S E E Sbjct: 249 AGEVLDADTLPRRYTAFTPCFREEAGSAGRDTRGIIRQHEFDKVEMVKFAKPEESDEELE 308 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 M + AE +L++L L YRV+SLCTGDLGFSA +TYD+EVWL N Y+EISSCS CG+FQ Sbjct: 309 SMTAEAEYLLQQLGLPYRVISLCTGDLGFSARQTYDVEVWLPSYNAYKEISSCSNCGDFQ 368 Query: 361 SRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 +RR N +YRDP + K ++ HTLNGSG+ GR + AILENY NADG++TIP VLRPYM Sbjct: 369 ARRANIKYRDPENFKGSRYLHTLNGSGLPAGRTMAAILENYQNADGTITIPEVLRPYMGG 428 Query: 420 LAVIKK 425 L I+ Sbjct: 429 LEKIEP 434 >gi|226309605|ref|YP_002769499.1| seryl-tRNA synthetase [Brevibacillus brevis NBRC 100599] gi|254783010|sp|C0ZH54|SYS_BREBN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226092553|dbj|BAH40995.1| seryl-tRNA synthetase [Brevibacillus brevis NBRC 100599] Length = 426 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 180/428 (42%), Positives = 273/428 (63%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQ+ E + L R+ + + + +DEK R +I++ E ++ +RN+ S Q+ Sbjct: 1 MLDVKVLRQDLEEVKRRLAHRNEDISALDQFVEVDEKRREVIQEAEALKNKRNTVSEQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D L E + E++ L++E ++ L+ ++ +PN+P E PIGT+ Sbjct: 61 VMKR--NKENADHLIAEMKEVNERIKALDEELRQLDEQLEFILLSLPNLPHESTPIGTTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ + G+ + + H+E+ G++DF+ A K++G+RF G A LERAL Sbjct: 119 DDNVIAWTWGEPRAFDFEIKPHWELASQAGILDFETAAKVTGSRFVFYKGLGARLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMMDLHSNEHGYEEVIPPFIVNRTSMTGTGQLPKFEEDAFKIEGPDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ LP +T + FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ E Sbjct: 239 MHRDEIMDGADLPRYYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ++++ AE++L+ L L YRV+S+CTGDLGF+A K +D+EVW+ + YREISSCS + Sbjct: 299 LDKLVKNAEKVLQLLGLPYRVLSMCTGDLGFTAAKKFDIEVWIPSGDTYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R +F HTLNGSG+A+GR + AILENY ADG++ IP VLRPYM Sbjct: 359 FQARRANIRFRRDTKSKPEFVHTLNGSGLAIGRTVAAILENYQEADGAIVIPEVLRPYMG 418 Query: 419 NLAVIKKE 426 + I + Sbjct: 419 GVDKIAPK 426 >gi|22126673|ref|NP_670096.1| seryl-tRNA synthetase [Yersinia pestis KIM 10] gi|45441041|ref|NP_992580.1| seryl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|51595744|ref|YP_069935.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|108806666|ref|YP_650582.1| seryl-tRNA synthetase [Yersinia pestis Antiqua] gi|108812762|ref|YP_648529.1| seryl-tRNA synthetase [Yersinia pestis Nepal516] gi|145599588|ref|YP_001163664.1| seryl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149366636|ref|ZP_01888670.1| seryl-tRNA synthetase [Yersinia pestis CA88-4125] gi|153948058|ref|YP_001401558.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162418210|ref|YP_001606120.1| seryl-tRNA synthetase [Yersinia pestis Angola] gi|165924544|ref|ZP_02220376.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165938994|ref|ZP_02227547.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|166009792|ref|ZP_02230690.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166211248|ref|ZP_02237283.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167400076|ref|ZP_02305594.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419704|ref|ZP_02311457.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424036|ref|ZP_02315789.1| seryl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024906|ref|YP_001721411.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|186894822|ref|YP_001871934.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|218928527|ref|YP_002346402.1| seryl-tRNA synthetase [Yersinia pestis CO92] gi|229841348|ref|ZP_04461507.1| Seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843453|ref|ZP_04463599.1| Seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229895825|ref|ZP_04510995.1| Seryl-tRNA synthetase [Yersinia pestis Pestoides A] gi|229903171|ref|ZP_04518284.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Yersinia pestis Nepal516] gi|270486966|ref|ZP_06204040.1| serine--tRNA ligase [Yersinia pestis KIM D27] gi|294503369|ref|YP_003567431.1| seryl-tRNA synthetase [Yersinia pestis Z176003] gi|30173194|sp|Q8ZGC4|SYS_YERPE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67461725|sp|Q66CJ9|SYS_YERPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123072932|sp|Q1CA85|SYS_YERPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123246327|sp|Q1CGF1|SYS_YERPN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166223311|sp|A4TN29|SYS_YERPP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166987319|sp|A7FJY0|SYS_YERP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238687315|sp|A9R5V2|SYS_YERPG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238688567|sp|B1JRF0|SYS_YERPY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238691445|sp|B2KA12|SYS_YERPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|21959689|gb|AAM86347.1|AE013883_1 serine tRNA synthetase [Yersinia pestis KIM 10] gi|45435900|gb|AAS61457.1| seryl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|51589026|emb|CAH20644.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|108776410|gb|ABG18929.1| seryl-tRNA synthetase [Yersinia pestis Nepal516] gi|108778579|gb|ABG12637.1| seryl-tRNA synthetase [Yersinia pestis Antiqua] gi|115347138|emb|CAL20031.1| seryl-tRNA synthetase [Yersinia pestis CO92] gi|145211284|gb|ABP40691.1| seryl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149291010|gb|EDM41085.1| seryl-tRNA synthetase [Yersinia pestis CA88-4125] gi|152959553|gb|ABS47014.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162351025|gb|ABX84973.1| seryl-tRNA synthetase [Yersinia pestis Angola] gi|165913141|gb|EDR31765.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|165923604|gb|EDR40736.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165991188|gb|EDR43489.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166207019|gb|EDR51499.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|166962445|gb|EDR58466.1| seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050784|gb|EDR62192.1| seryl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056885|gb|EDR66648.1| seryl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751440|gb|ACA68958.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|186697848|gb|ACC88477.1| seryl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|229678941|gb|EEO75044.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Yersinia pestis Nepal516] gi|229689800|gb|EEO81861.1| Seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229697714|gb|EEO87761.1| Seryl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700748|gb|EEO88777.1| Seryl-tRNA synthetase [Yersinia pestis Pestoides A] gi|262361409|gb|ACY58130.1| seryl-tRNA synthetase [Yersinia pestis D106004] gi|262365054|gb|ACY61611.1| seryl-tRNA synthetase [Yersinia pestis D182038] gi|270335470|gb|EFA46247.1| serine--tRNA ligase [Yersinia pestis KIM D27] gi|294353828|gb|ADE64169.1| seryl-tRNA synthetase [Yersinia pestis Z176003] gi|320015764|gb|ADV99335.1| Seryl-tRNA synthetase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 430 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 269/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + E + +E+ ++L + E ++A RNS S QIG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGFKLDVEVLRQQEERRKVLQVETESLQAERNSRSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ L IPN+P + VP+G + N Sbjct: 61 AKARG--EDIEPLRLEVNALGEKLDAAKAELDKLQNEIRDLALSIPNLPDDSVPVGKNEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI + G+ ++H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNIEVSRWGEPRKYDFDVKDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYLEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLAEESDNSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPLTNLVRDEILEEDSLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +RYR+ + + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARYRNKTDRKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPDV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLEYI 429 >gi|269792616|ref|YP_003317520.1| seryl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100251|gb|ACZ19238.1| seryl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 427 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 208/426 (48%), Positives = 277/426 (65%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DI+W+R N E L+ R + + +L LDE+ R ++ ++E+I+ARRN S ++G+ Sbjct: 1 MMDIKWVRDNVEAAREYLRNRRSDFPLDRLLELDERRRQILGEVEEIKARRNEGSKRVGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G AL + +L +++ LE E V L L+ +PN P VP+G Sbjct: 61 MKRRG--EDASALMEDMRSLGDRVSQLEAELGSVQGELDDLMLRMPNRPHSTVPVGEDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N ++R+ G+ R H+EIGE LG+MDF+RA +L+ +RF VL G A LERAL Q Sbjct: 119 SNPVVRTWGEPRRFDFEPRPHWEIGEILGIMDFERAVRLAESRFVVLKGLGARLERALVQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 +M+DLHT +G+ EVS P LV M GTGQ+PKF++D++ C D WLIPT+EV LTNL Sbjct: 179 YMLDLHT-SNGFIEVSPPFLVSSATMTGTGQLPKFSEDLYRCANDDLWLIPTAEVPLTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EI++ SLPL +T P FR EAGS GRD +GMLR HQF K ELV I R E+S+ E Sbjct: 238 HSGEILDEDSLPLHYTAHTPCFRREAGSYGRDVKGMLRVHQFPKVELVKICRPEESYDEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + + AE +LK L L YRVV LCTGD+GF++ KTYD+EVWL Q YREISSCS C +F Sbjct: 298 ESLTASAESVLKGLGLPYRVVCLCTGDMGFASSKTYDIEVWLPSQGCYREISSCSNCEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RRMN+RYR +F HTLNGSG+AVGRCL+AI+EN+ DGS+ IP L PYM Sbjct: 358 QARRMNTRYRPKEGGRPRFVHTLNGSGIAVGRCLLAIVENFQREDGSIEIPEALVPYMGG 417 Query: 420 LAVIKK 425 + I Sbjct: 418 VREITP 423 >gi|227498855|ref|ZP_03928995.1| seryl-tRNA synthetase [Acidaminococcus sp. D21] gi|226904307|gb|EEH90225.1| seryl-tRNA synthetase [Acidaminococcus sp. D21] Length = 424 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 201/426 (47%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + + A+K RH E + LD++ R L++++E ++ RNS SA+I + Sbjct: 1 MLDLKFVRENLDKVAEAMKNRHTEVDLDAFRKLDQERRDLLQEVEADKSMRNSVSAEISK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G TL +++ +K+ EV L+ ++ IPN+P VP+G Sbjct: 61 MKKNG--EDASEKILSMRTLGDKIAETDKKLKEVEQGLRDIMLTIPNMPDASVPVGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G+ + H+++GE LG++D +RA K+SG RF G A LERA+ Sbjct: 119 ENPEVRKWGEPTHFDFEPKAHWDLGEDLGILDSNRAAKVSGGRFYYYLGLGARLERAVYN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTNL 239 FM+D HT + GYTEV P +V E M GTGQ+PKF +DM+ +LIPT+EV LTN Sbjct: 179 FMLDQHTQKDGYTEVIPPYIVNRETMTGTGQLPKFHEDMYRLEGMEMYLIPTAEVPLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EII+ LP+ T P FR+EAGSAGRDTRG++RQHQF K E+V T+ EDSF E Sbjct: 239 YRDEIIDGAKLPIYLTAFTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKFTKPEDSFDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AE IL+ L L Y VV LCTGDLGFSA K YD+EVW QN YREISSCS C +F Sbjct: 299 EKLTHDAEGILQALGLPYHVVCLCTGDLGFSATKCYDIEVWFPAQNKYREISSCSNCVDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R + +F HTLNGSG+AVGR + AILENY ADGS+ +P VLRPYM Sbjct: 359 QARRANIRFRRDSKSKPEFVHTLNGSGLAVGRTVAAILENYQQADGSIVVPEVLRPYM-G 417 Query: 420 LAVIKK 425 VI K Sbjct: 418 CDVIAK 423 >gi|330446442|ref|ZP_08310094.1| seryl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490633|dbj|GAA04591.1| seryl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 435 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 193/434 (44%), Positives = 266/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R E + +L+EK + L K E+++A RNS S IGQ Sbjct: 1 MLDSKLLRTELDETAEKLARRGFTLDVETLRNLEEKRKSLQVKTEELQALRNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + E L +L +K E+ + L + +PN+P + VP+G + Sbjct: 61 AKAKGDHEEAERIMAEVGNLGSELDEAKKALAELQAELDVITQSVPNIPDDSVPVGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ I G+ + ++H ++GE G +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 ENVEISRWGEPKTYDFEVKDHVDLGEMAGGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF +D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTQPLTEKVNDEEPRTLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMMRDTITDEADLPVKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGSCKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELLHTLNGSGLAVGRTMVAILENNQQADGRIEI 420 Query: 410 PTVLRPYMNNLAVI 423 P VLR YMN + I Sbjct: 421 PEVLRKYMNGMTHI 434 >gi|238920371|ref|YP_002933886.1| seryl-tRNA synthetase [Edwardsiella ictaluri 93-146] gi|259511668|sp|C5BE90|SYS_EDWI9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238869940|gb|ACR69651.1| seryl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146] Length = 430 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 196/431 (45%), Positives = 264/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + + + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRNELDAVAEKLARRGYKLDVDTLRQQEERRKVLQVETESLQAERNSRSKSIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRREVNELGEKLDAAKAELDRLQQEIRDLALSIPNLPDDSVPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I G+ S R+H +GE +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNQEICRWGEPRSYNFDVRDHVTLGEMAEGLDFAAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV + +YGTGQ+PKF D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYLETYVPYLVNHDTLYGTGQLPKFGADLFHTRPLEEEADSSIYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI+E +LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I R Sbjct: 239 EVPVTNLVRGEILEESALPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ QN YREISS Sbjct: 299 EDSMAALEELTAHAEKVLQLLNLPYRKVLLCTGDMGFGSSKTYDLEVWVPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY ADG + +P Sbjct: 359 CSNMWDFQARRMQARYRSKDDKKPRLVHTLNGSGLAVGRTLVAVMENYQQADGRIQVPEA 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|42779094|ref|NP_976341.1| seryl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|67461814|sp|Q73FJ3|SYS_BACC1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|42735009|gb|AAS38949.1| seryl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 424 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 187/426 (43%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E ++L E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAESLILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLXNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|254761666|ref|ZP_05213684.1| seryl-tRNA synthetase [Bacillus anthracis str. Australia 94] Length = 424 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 187/426 (43%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +AL E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKRXKK--DAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|283478928|emb|CAY74844.1| serS [Erwinia pyrifoliae DSM 12163] Length = 447 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 268/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + + +E+ ++L + E+++A RNS S IGQ Sbjct: 18 MLDPNLLRNEPDAVAEKLARRGYKLDVDTLRAHEERRKVLQVETENLQAERNSRSKSIGQ 77 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + +S+ IPN+P + VP+G + Sbjct: 78 AKARG--EDIEPLRQEVNALGERLDAAKAELDALLTSINDFSMAIPNIPADVVPLGKDDS 135 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN I G R+H E+GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 136 ENQEIGRWGVPRKFDFTVRDHVELGERAAGLDFAAAVKLTGSRFIVMKGQIALMHRALSQ 195 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV ++YGTGQ+PKF +D+F T LIPTS Sbjct: 196 FMLDLHTEQHGYQETYVPYLVNHASLYGTGQLPKFGEDLFHTRPLDEEASSSNYALIPTS 255 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLPL+ T P FRSEAG+ GRDTRG++R HQF K E+V +TR Sbjct: 256 EVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFDKVEMVHVTRP 315 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E ++ AE++L+ L+L YR V LCTGD+GF A KTYDLEVWL Q+ YREISS Sbjct: 316 EDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLPAQDTYREISS 375 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R R + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 376 CSNMGDFQARRMKARCRPKGETKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVPEV 435 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 436 LRPYMKGLTFI 446 >gi|255318826|ref|ZP_05360052.1| seryl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|255304082|gb|EET83273.1| seryl-tRNA synthetase [Acinetobacter radioresistens SK82] Length = 423 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 192/425 (45%), Positives = 272/425 (64%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E +++AL KR ++ E +L+ + + + +K E+++A RN+ + Q+GQ Sbjct: 1 MIDPKLLRNNIEAVNLALAKRGVQLDVEEWAALEVRRKEIQQKTENLQAERNAGAKQVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + S + +++ E E+ + L+ IPN+P E VP G + Sbjct: 61 LKKAG--EDASEIMTRMSAIGDEIKAAELALAELQAELETKSMNIPNLPDESVPAGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I + G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 119 DNVEILTWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 239 FVRDEIIDTARLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 299 LEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K +F HTLNGSG+AVGR L+A++ENY ADGS+ IP VLRPYM Sbjct: 359 FQARRMKARYR-VDQKKTEFVHTLNGSGLAVGRTLLAVMENYQRADGSIEIPEVLRPYMG 417 Query: 419 NLAVI 423 I Sbjct: 418 GQEFI 422 >gi|74317247|ref|YP_314987.1| seryl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] gi|123611947|sp|Q3SJH9|SYS_THIDA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|74056742|gb|AAZ97182.1| seryl-tRNA synthetase, class IIa [Thiobacillus denitrificans ATCC 25259] Length = 427 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 200/429 (46%), Positives = 271/429 (63%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + L R + +L+ + + + + +D ++RRN+ S QIG Sbjct: 1 MLDIQLLRKDAALVAERLAARGFAFDAARFDALEAERKTIQTRTQDAQSRRNTLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E L ++L LE E+ + L + IPN+P E V G Sbjct: 61 LKGKG--EDTTAVMAEVGGLGDELKQLETRLSELQAELNDFLMGIPNLPHESVAPGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ + G R+H ++GE LG +DF A K++G+RFSV+ G LA L RAL Q Sbjct: 119 ANVEVSRWGTPRQFDFAVRDHVDLGEGLGQLDFAAAVKITGSRFSVMRGGLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FM+DLHT+EHGYTEV P +V E+M GTGQ+PKF +D+F +LIPT+EV + Sbjct: 179 FMLDLHTTEHGYTEVYVPYVVNAESMRGTGQLPKFEEDLFHVPRSDADRLYLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI+ +++LPL+F P FRSEAGS GRDTRGM+RQHQF K ELV + R EDS+ Sbjct: 239 TNLVRDEIVAAEALPLKFVAHTPCFRSEAGSYGRDTRGMIRQHQFDKVELVQMVRPEDSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+RL L YR ++LC+GD+GFSA KTYDLEVWL QN YREISSCS Sbjct: 299 AALEGLAAHAETVLQRLGLPYRKMALCSGDMGFSAAKTYDLEVWLPAQNTYREISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RRM +R+R+ K + HTLNGSG+AVGR L+AILENY NADGS+T+P LRP+ Sbjct: 359 EAFQARRMQARFREGQGK-PELLHTLNGSGLAVGRTLVAILENYQNADGSITVPEALRPW 417 Query: 417 MNNLAVIKK 425 M + + Sbjct: 418 MGGVERLTP 426 >gi|218710023|ref|YP_002417644.1| seryl-tRNA synthetase [Vibrio splendidus LGP32] gi|254783502|sp|B7VH19|SYS_VIBSL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|218323042|emb|CAV19219.1| Seryl-tRNA synthetase [Vibrio splendidus LGP32] Length = 435 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 195/434 (44%), Positives = 265/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R E I L+EK + L K E+++A RNS S IGQ Sbjct: 1 MLDSKLLRAELDETAAKLARRGFPLDVETIRELEEKRKSLQMKTEELQALRNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + E L +L + E+ S L+ + IPN+P EVP G + Sbjct: 61 AKAKGDHEEAERILAEVGNLGAELDQAKVTLAELQSELETITMSIPNLPDAEVPDGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ + ++H ++GE G +DF A K+SG+RF V+ G A L RA+ Q Sbjct: 121 DNVEVSRWGQPKTYDFEVKDHVDLGEMSGGLDFASAVKISGSRFIVMKGKFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 FM+DLHT EHGYTE+ P LV +++YGTGQ+PKF +D+F T+ LI Sbjct: 181 FMLDLHTDEHGYTEMYVPYLVNHDSLYGTGQLPKFGEDLFHTSPLTEQVSDVPLKTLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMVRDTITDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSAKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 PTVL+PYM + I Sbjct: 421 PTVLQPYMGGVTHI 434 >gi|163938025|ref|YP_001642909.1| seryl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|229009527|ref|ZP_04166756.1| Seryl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|229053863|ref|ZP_04195300.1| Seryl-tRNA synthetase [Bacillus cereus AH603] gi|229131024|ref|ZP_04259940.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|229165006|ref|ZP_04292804.1| Seryl-tRNA synthetase [Bacillus cereus AH621] gi|163860222|gb|ABY41281.1| seryl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|228618458|gb|EEK75485.1| Seryl-tRNA synthetase [Bacillus cereus AH621] gi|228652436|gb|EEL08357.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228721473|gb|EEL72990.1| Seryl-tRNA synthetase [Bacillus cereus AH603] gi|228751738|gb|EEM01535.1| Seryl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 424 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 189/426 (44%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E V L++L+ IPN+P E PIG + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPIGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFTYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEIVSKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|328543816|ref|YP_004303925.1| Seryl-tRNA synthetase [polymorphum gilvum SL003B-26A1] gi|326413560|gb|ADZ70623.1| Seryl-tRNA synthetase [Polymorphum gilvum SL003B-26A1] Length = 426 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 234/425 (55%), Positives = 308/425 (72%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR N + D AL +R E +E +LSLD+ R I ++++ + RRN+ S ++G+ Sbjct: 1 MFDIKWIRDNADAFDRALARRGHESAAERLLSLDDARRAHIARLQEAQERRNAASKEVGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + AL +E + +K + E+EE + +++ ++ IPN+PL+EVP G Sbjct: 61 AKASGDEAAAQALIDEVAKIKSFIQQGEEEERRLVAAVDAALAVIPNLPLDEVPDGADET 120 Query: 121 ENILIRSVGKKPSAIHL--SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N++ G+K + +EHFE+ A MDF A KLSG+RF +L G LA LERAL Sbjct: 121 GNVVHHVWGEKLAFDFDHAPKEHFELAAAEADMDFATAAKLSGSRFVLLKGQLARLERAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 GQFM+DLHT EHGYTEV+ PLLVR +A+YGT Q+PKF +D+F T+ +L+PT+EV LTN Sbjct: 181 GQFMLDLHTGEHGYTEVAPPLLVRADALYGTSQLPKFEEDLFKTSSDHYLVPTAEVPLTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + EI+ LPLR + L FRSEAGSAGRD RGMLRQHQF KCELVS+TR EDS +E Sbjct: 241 MVAGEILGEGDLPLRVSALTHCFRSEAGSAGRDVRGMLRQHQFVKCELVSVTRPEDSLSE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ERML CAE +L++L LHYRVV+LCTGD+GF++ KTYD+EVWL GQN YREISSCS CG+ Sbjct: 301 LERMLGCAETVLQKLGLHYRVVTLCTGDMGFASQKTYDIEVWLPGQNAYREISSCSVCGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRMN+RYR + K+L+ HTLNGSGVAVGR +IA++ENY NADGSVT+P LRPYMN Sbjct: 361 FQARRMNARYRLTDGKALRHVHTLNGSGVAVGRAMIAVMENYQNADGSVTVPEALRPYMN 420 Query: 419 NLAVI 423 + I Sbjct: 421 GIERI 425 >gi|312622837|ref|YP_004024450.1| seryl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203304|gb|ADQ46631.1| seryl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 420 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 199/424 (46%), Positives = 282/424 (66%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR NPE + L KR+ + IL LDE+ R L+ ++E ++A +N S ++ + Sbjct: 1 MLDLKYIRANPEKVQEGLSKRNKDISIAPILELDERRRKLLAEVESLKALQNQKSKEVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V L NE L +++ L+ + EV ++ ++ IPN+P E VP+G Sbjct: 61 LKKEGK--DVTDLMNELKDLSDKIKELDCKVKEVEDEIENILLTIPNIPHESVPVGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + H+EIG LG++DF+RA+K+SG+RF+ G A LERAL Sbjct: 119 ENVEVRRWGEVREPEFEIKPHWEIGINLGILDFERASKVSGSRFTFYRGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH +HGYTE+ P LV ++M GTGQ+PKF +D F TTD +LIPT+EV +TN + Sbjct: 179 FMLDLHIEKHGYTELFPPFLVVRKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ + LP+++ + FR+EAG+AG+DTRG++RQHQF K ELV T+ EDS+ E E Sbjct: 239 REEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFTKPEDSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 ++ + AE++LK L L YRVV LC+GDLGFS+ KTYD+EVW+ Y EISSCS ++Q Sbjct: 299 KLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFESYQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR N R+R + K L + HTLNGSG+AVGR L AILEN+ DG+V +P VLR YM Sbjct: 359 ARRANIRFRRKDGK-LDYVHTLNGSGLAVGRTLAAILENFQQKDGTVVVPEVLRKYM-GT 416 Query: 421 AVIK 424 VIK Sbjct: 417 DVIK 420 >gi|262378914|ref|ZP_06072071.1| seryl-tRNA synthetase [Acinetobacter radioresistens SH164] gi|262300199|gb|EEY88111.1| seryl-tRNA synthetase [Acinetobacter radioresistens SH164] Length = 425 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 192/425 (45%), Positives = 272/425 (64%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E +++AL KR ++ E +L+ + + + +K E+++A RN+ + Q+GQ Sbjct: 3 MIDPKLLRNNIEAVNLALAKRGVQLDVEEWAALEVRRKEIQQKTENLQAERNAGAKQVGQ 62 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + S + +++ E E+ + L+ IPN+P E VP G + Sbjct: 63 LKKAG--EDASEIMTRMSAIGDEIKAAELALAELQAELETKSMNIPNLPDESVPAGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I + G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 121 DNVEILTWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 181 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 241 FVRDEIIDTARLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 301 LEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K +F HTLNGSG+AVGR L+A++ENY ADGS+ IP VLRPYM Sbjct: 361 FQARRMKARYR-VDQKKTEFVHTLNGSGLAVGRTLLAVMENYQRADGSIEIPEVLRPYMG 419 Query: 419 NLAVI 423 I Sbjct: 420 GQEFI 424 >gi|167036460|ref|YP_001664038.1| seryl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167038703|ref|YP_001661688.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300913738|ref|ZP_07131055.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307723246|ref|YP_003902997.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|320114885|ref|YP_004185044.1| seryl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687557|sp|B0K0Z5|SYS_THEPX RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238687674|sp|B0KAI8|SYS_THEP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166852943|gb|ABY91352.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|166855294|gb|ABY93702.1| seryl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300890423|gb|EFK85568.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307580307|gb|ADN53706.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|319927976|gb|ADV78661.1| seryl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 423 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 199/426 (46%), Positives = 270/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR NPE + IA++ + + + L LDEK R ++ ++E ++ RRN S I + Sbjct: 1 MLDVKRIRNNPEAVRIAIELKGEKADIDRFLELDEKRRQMLVELETLKNRRNVESDNIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG L E L +++ +E+E EV L++++ IPN+P E VPIG S Sbjct: 61 LKREGK--DASDLIAEMKELSDKIKEMEQEVKEVEEELERILWTIPNIPHESVPIGDSDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ + H+EIG+ L ++DF+ A +++G+RF+ G A LERAL Sbjct: 119 DNVEIRRWGEPRKFDFEPKPHWEIGQELDILDFEAAARVTGSRFTFYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGYTEV P +V +M+GTGQ+PKF +D F + IPT+EV +TN+ Sbjct: 179 FMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDAFKVYGTDYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y II+ LP+ + FR EAGSAGRDTRG++RQHQF K ELV T + S+ E Sbjct: 239 YRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M AEE+L+ L L YRVV +CTGDLGF+A K YD+EVW+ Y EISSCS C +F Sbjct: 299 EKMTRDAEEVLQALGLPYRVVVICTGDLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR + ++ HTLNGSGVAVGR AILENY DGSV IP VLRPYM Sbjct: 359 QARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYMK- 417 Query: 420 LAVIKK 425 + VIKK Sbjct: 418 VDVIKK 423 >gi|194288886|ref|YP_002004793.1| seryl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|238692754|sp|B3R376|SYS_CUPTR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|193222721|emb|CAQ68724.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Cupriavidus taiwanensis LMG 19424] Length = 434 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 198/437 (45%), Positives = 268/437 (61%), Gaps = 15/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ R++ + + L R + +L+ + + L + E+++ARRNS S QIG Sbjct: 1 MLDIQLFRKDIDAVAQRLATRGFQLDVAAFQALEAERKQLQTQTEELQARRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + L E+ + L +L+ IPN+P E VP+G Sbjct: 61 LKGKG--EDASAVMAEVGGIGDTLKASAARLDEIQAHLGELMLSIPNLPHESVPVGNDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG+ R+H ++GE LG +DFD A K++G+RFS+L G +A L RAL Q Sbjct: 119 QNVEVRRVGEPRQFDFAVRDHVDVGEKLG-LDFDTAVKVTGSRFSMLRGGMARLHRALVQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 M+D HT EHGYTE+ P +V +M GTGQ+PKF +D+F +LI Sbjct: 178 LMLDTHTQEHGYTEMYVPYIVNAASMRGTGQLPKFEEDLFKVPRKVGSEEGERIENFYLI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN+ I+ LPLRF P FRSEAGS G+DTRGM+RQHQF K ELV + Sbjct: 238 PTAEVPLTNIVRDAIVAGDKLPLRFVAHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQV 297 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + SF E++ AE ILK+L+L +R + LCTGD+GF + KTYDLEVW+ QN YRE Sbjct: 298 VPADQSFDALEQLTGHAEAILKKLELPFRTIVLCTGDMGFGSTKTYDLEVWIPAQNTYRE 357 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS G+FQ+RRM +R R K + HTLNGSG+AVGR L+AILENY NADGSVT+ Sbjct: 358 ISSCSNMGDFQARRMQARMRTGQGK-PELVHTLNGSGLAVGRTLVAILENYQNADGSVTV 416 Query: 410 PTVLRPYMNNLAVIKKE 426 P L+PYM ++ E Sbjct: 417 PAALQPYMGGTTRLEPE 433 >gi|296840775|ref|ZP_06863421.2| serine--tRNA ligase [Neisseria polysaccharea ATCC 43768] gi|296839997|gb|EFH23935.1| serine--tRNA ligase [Neisseria polysaccharea ATCC 43768] Length = 441 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 199/433 (45%), Positives = 275/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 11 MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 70 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + A ++ + +K L + V L + IPN+P E VP G Sbjct: 71 LKGQSKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPAGKDET 130 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 131 ENVEVRKVGTPRKFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 189 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 190 FMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKTTQYLIPTAE 249 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + I++ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 250 VTLTNTVADSILDEGGLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 309 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 310 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSC 369 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 370 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 428 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 429 QPYMGGVAKLEDK 441 >gi|330810440|ref|YP_004354902.1| Serine--tRNA ligase (seryl-tRNA synthetase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378548|gb|AEA69898.1| Serine--tRNA ligase (seryl-tRNA synthetase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 426 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 193/427 (45%), Positives = 274/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R N + + L R I +L+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEALQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L ++ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMAGELSAGKVELDAIQTELDSILLGIPNLPHESVPVGEDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPKAFDFPVQDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHVTEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ + EI+++K LP++F P FRSEAG++GRDTRGM+RQHQF K E+V I S Sbjct: 239 TNIVAGEIVDAKQLPIKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE++L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALESLTANAEKVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M + VI Sbjct: 419 MGGIEVI 425 >gi|307254703|ref|ZP_07536531.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256921|ref|ZP_07538699.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259145|ref|ZP_07540875.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306862376|gb|EFM94342.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864655|gb|EFM96560.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866812|gb|EFM98670.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 435 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 200/436 (45%), Positives = 269/436 (61%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + + ALK KR E + +L+EK + L K E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLDDVANALKVKRGFTLDVERVKALEEKRKALQVKTETLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + AL E + +L + +V + +++L+ +PN+P +EVP+G Sbjct: 61 AAKARG--EDISALLAEVDNMGNELNEAKVALDQVQAEIRELLLSVPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + G+ ++H +GEAL +DF KL+ +RF V+ G LA L RAL Sbjct: 119 TENLEVSRWGEPRQFDFEVKDHVALGEALNGLDFAAGVKLTASRFVVMKGKLARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E + P LV + ++GTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPNETQRPFSL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EII+ SLPLR+T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQFEKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF + KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM++R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 +P VLRPYM + VI Sbjct: 419 VPEVLRPYMGGVEVIT 434 >gi|209695311|ref|YP_002263240.1| seryl-tRNA synthetase [Aliivibrio salmonicida LFI1238] gi|238065094|sp|B6ENN5|SYS_ALISL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|208009263|emb|CAQ79529.1| seryl-tRNA synthetase [Aliivibrio salmonicida LFI1238] Length = 435 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 193/434 (44%), Positives = 264/434 (60%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E + +L+E+ + L ED++A+RNS S IGQ Sbjct: 1 MLDSKLLRTELDETAEKLARRGFKLDVETLRTLEEQRKSLQVITEDLQAQRNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ D + + +TL +L + E+ ++ + +PN+P E VP G + Sbjct: 61 AKAKGDHEEADRIMADVATLGSELDDAKAGLAELQQQIESIALSVPNLPDESVPYGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G + R+H +GE +DF A K+SG+RF V+ G A L RAL Q Sbjct: 121 ENVEVLRWGTPLTYDFEVRDHVALGELADGLDFASAVKISGSRFIVMKGQFARLHRALSQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 FM+DLHT EHGY E+ P LV +++YGTGQ+PKF +D+F T+ LI Sbjct: 181 FMLDLHTEEHGYMEMYVPYLVNHDSLYGTGQLPKFGEDLFHTSPLTEQVSDVPLKMLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I E LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMVRDTITEEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSRKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN+ ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRQGEKKPELVHTLNGSGLAVGRTMVAILENFQQADGKIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VLR YMN + I Sbjct: 421 PEVLRKYMNGVEFI 434 >gi|253698745|ref|YP_003019934.1| seryl-tRNA synthetase [Geobacter sp. M21] gi|259511671|sp|C6E7Z3|SYS_GEOSM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|251773595|gb|ACT16176.1| seryl-tRNA synthetase [Geobacter sp. M21] Length = 422 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 194/424 (45%), Positives = 270/424 (63%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR+N E ++ LK R LD + R L+++ E ++A RN + +I + Sbjct: 1 MLDARYIRENLETVEARLKTRGEGVDIALFKELDGRRRELLQQSETLKALRNKVTEEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S K E + +Q+ +++ V L+ + +PNVP E PIG S Sbjct: 61 L---QDKSQAAERKTEMREVSQQIKGIDESLRSVEEELQNFLLTVPNVPNETTPIGRSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+++R+ G+ P+ + H+EIGE LG++DF+R KL+GARF++ G A LERAL Sbjct: 118 DNVVVRTWGEVPALSFEPKPHWEIGEGLGILDFERGAKLAGARFTLYRGAGARLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSLTNL 239 +M+DLH EH Y E+ P +V E M GTGQ+PKF +D+ +LIPT+EV +TN+ Sbjct: 178 YMLDLHIDEHKYIEMLPPFMVNRECMTGTGQLPKFEEDLFHMEGVDFFLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ LP+ + P FR EAGS G+DTRG++RQHQF K ELV T EDS+ + Sbjct: 238 HRGEILKGSDLPISYVAYTPCFRKEAGSYGKDTRGLIRQHQFNKVELVKFTSPEDSYEQL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++L AEE+L+RL + YRVV LCTGD+GFSA KT+D+EVWL GQN YREISSCS +F Sbjct: 298 QKLLGHAEEVLRRLQIPYRVVELCTGDIGFSAAKTFDIEVWLPGQNCYREISSCSCFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R+R +F HTLNGSG+AVGR L+A+LENY ADGSV IP VLRPYM Sbjct: 358 QARRAGIRFRPEEKAKPEFVHTLNGSGLAVGRTLVAVLENYQQADGSVLIPEVLRPYMGG 417 Query: 420 LAVI 423 I Sbjct: 418 AERI 421 >gi|254786029|ref|YP_003073458.1| seryl-tRNA synthetase [Teredinibacter turnerae T7901] gi|259516191|sp|C5BIK4|SYS_TERTT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|237685707|gb|ACR12971.1| serine--tRNA ligase [Teredinibacter turnerae T7901] Length = 426 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 194/425 (45%), Positives = 269/425 (63%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + R + L KR E I L++ +++ + E+++ RN+ S IG+ Sbjct: 1 MLDPKLFRTQLPEIAAKLAKRGFTLDVERIQQLEDTRKVVQVECENLQQERNTRSKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E LK L E++ V + L ++I+ +PNV +EVP G + + Sbjct: 61 AKAAG--EDIAPLLKEVDNLKSALSEAEQKLGAVQAELDEIIAGVPNVLADEVPEGKNED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G ++H ++G L +DF+ A K++G+RF+V+TG +A L RAL Q Sbjct: 119 DNVEVSQWGTPREFDFEVKDHVDVGAGLKGLDFETAGKITGSRFAVMTGAVARLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR--WLIPTSEVSLTN 238 FM++ HT EHGY E+ P +V +++YGTGQ+PKF +D+F D R +LIPT+EV +TN Sbjct: 179 FMLNTHTGEHGYDEIYVPYIVNKDSLYGTGQLPKFEEDLFKLRDDRDFYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ K LP+RF P FRSEAGS GRDTRGM+RQHQF K ELV + +S Sbjct: 239 MMRDEIIDEKQLPVRFACHTPCFRSEAGSYGRDTRGMIRQHQFEKVELVQFVKPGESMAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E ++ AE IL++L L YR V LC GD GFS+ KTYDLEVWL QN YREISSCS G+ Sbjct: 299 LESLVGHAETILQKLSLPYRKVILCGGDTGFSSTKTYDLEVWLPSQNTYREISSCSNFGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR+ + + HTLNGSG+A+GR L+AILENY ADGS+ IP VL+P+MN Sbjct: 359 FQARRMKARYRNAETGKPELLHTLNGSGLAIGRTLVAILENYQQADGSLAIPEVLQPFMN 418 Query: 419 NLAVI 423 I Sbjct: 419 GQTSI 423 >gi|50121568|ref|YP_050735.1| seryl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] gi|67461745|sp|Q6D3V0|SYS_ERWCT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|49612094|emb|CAG75544.1| seryl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] Length = 431 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 200/432 (46%), Positives = 267/432 (61%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIAL-KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R + + L +R + E + +E+ ++L + E ++A RNS S +IG Sbjct: 1 MLDPNLLRNELDAVAEKLLARRGFKLDVETLRKQEERRKVLQVETESLQAERNSRSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G ++ L+ E +TL E+L + E ++ + ++ L IPN+P + VP+G Sbjct: 61 AAKARG--EDIEPLRREVNTLGEKLDTAKAELDQLQNEIRDLALTIPNLPDDSVPLGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N + G+ R+H E+GE G +DF A KL+GARF V+ G +A L RAL Sbjct: 119 SQNKEVTRWGEPRKYDFAVRDHVELGEMAGGLDFAAAVKLTGARFVVMKGQIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPT 231 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT Sbjct: 179 QFMLDLHTQQHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTNPLSEEAESSQYALIPT 238 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV LTNL EI++ +SLPL+ T P FRSEAGS GRDTRG++R HQF K ELV I R Sbjct: 239 AEVPLTNLVRDEILDEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVR 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS E + + AE +L+ L L YR V LCTGD+GF + KTYDLEVWL Q+ YREIS Sbjct: 299 PEDSMQALEELTTHAETVLQLLKLPYRKVLLCTGDMGFGSTKTYDLEVWLPAQDTYREIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A+LENY ADG + IP Sbjct: 359 SCSNMWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEIPE 418 Query: 412 VLRPYMNNLAVI 423 VLRPYM L I Sbjct: 419 VLRPYMGGLEFI 430 >gi|163752526|ref|ZP_02159712.1| seryl-tRNA synthetase [Shewanella benthica KT99] gi|161327581|gb|EDP98779.1| seryl-tRNA synthetase [Shewanella benthica KT99] Length = 428 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 198/429 (46%), Positives = 268/429 (62%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++ R E L R E + L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFFRNELEVTAERLATRGFILDVERLSKLEEKRKSLQMATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V + + +L +L + E + + L + +PN+P E VP G + Sbjct: 61 AKAKG--EDVAPIMAKVGSLGSELDAKKSELSALLAELNVIAMSVPNLPDESVPFGADES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ IR G ++H ++GEALG +DF A K++G+RF ++ G +A + RAL Q Sbjct: 119 ENVEIRRWGTPKEFSFEVKDHVDLGEALGGLDFKSAVKITGSRFIIMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT EHGYTEV PLLV ++++ GT Q+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTDEHGYTEVYVPLLVNEDSLLGTSQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTN+ II+ LP++ T P FRSEAGS GRDTRG++RQHQF K ELV + + ED Sbjct: 239 PLTNMARDTIIDEDELPVKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S + + AE +L++L L YR V LCTGD+GF A KTYD+EVWL Q+ YREISSCS Sbjct: 299 SMAALDALTGHAETVLQKLALPYRTVILCTGDMGFGASKTYDIEVWLPAQDTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RY+ ++K HTLNGSG+AVGR L+A+LENY N DGS+T+P VLR Sbjct: 359 NMQDFQARRMQARYKAKSAKKPALLHTLNGSGLAVGRTLVAVLENYQNEDGSITVPEVLR 418 Query: 415 PYMNNLAVI 423 PYMN L I Sbjct: 419 PYMNGLEKI 427 >gi|283138943|gb|ADB12546.1| seryl-tRNA synthetase [uncultured bacterium 9F08] Length = 428 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 202/427 (47%), Positives = 273/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + R + L +R E E I L+ + + + + +++++ RN S IGQ Sbjct: 1 MLDPRLFRGELDTTAAQLARRGFELDVEAIARLEAERKAVQVRTQELQSERNQRSKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V L + + L ++L E+ + L ++ +PN+P + VP G S Sbjct: 61 AKAKG--EDVQPLLDAVADLGDKLKQAEERLSALQDELCAILMGVPNIPDQSVPDGKSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI +R G+ +H +IG+ LG +DFD A+KL+G+RF+V++G LA L RAL Q Sbjct: 119 DNIEVRRWGEPAVFDFEPLDHVDIGQRLGGLDFDAASKLTGSRFAVMSGPLARLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+DLHT+EHGY E P +V +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDLHTTEHGYRETYVPYIVNSDSLRGTGQLPKFEEDLFALQGEHDYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L EIIE+ LPL F P FRSEAGS GRDTRGM+RQHQF K ELV I E SF Sbjct: 239 LVREEIIEAAQLPLCFAAHTPCFRSEAGSYGRDTRGMIRQHQFEKVELVQIVHPEHSFEA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE +L+RL L YR+++LCTGD+GFSACKTYDLEVWL GQ YREISSCS + Sbjct: 299 LEALTGHAEVVLQRLGLPYRLMNLCTGDIGFSACKTYDLEVWLPGQEKYREISSCSNFRD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R P K + HT+NGSG+AVGR L+AILENY ADGSVT+P L PYM Sbjct: 359 FQARRMQARWRSPEMKKPELVHTVNGSGLAVGRTLVAILENYQQADGSVTVPDALHPYMA 418 Query: 419 NLAVIKK 425 + V++ Sbjct: 419 GIRVLRP 425 >gi|255262643|ref|ZP_05341985.1| seryl-tRNA synthetase [Thalassiobium sp. R2A62] gi|255104978|gb|EET47652.1| seryl-tRNA synthetase [Thalassiobium sp. R2A62] Length = 430 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 207/429 (48%), Positives = 272/429 (63%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP D AL +R P S +L LDE R +I E +A +N S ++G Sbjct: 1 MHDIRTIRDNPAAFDAALSRRGDAPMSSQVLELDEARRAMILAAETAQAEQNKASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ + + L+ + K Q+ L ++ + L L++ IPN+P E+VP G Sbjct: 61 AKGRGDDAEFERLRALVAEKKAQVAQLNEDAKTKDAELTDLLAVIPNLPYEDVPDGADEG 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ I G + EHFEI MDF+ A K+SG+RF +L+G +A + RA+ Q Sbjct: 121 YNVEINRWGTPRAFDFKPVEHFEIAGVASSMDFETAAKMSGSRFVLLSGAVARVNRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID H ++G E P+LVRDEAMYGT ++PKF +D + TT+G WL+PTSEV LT + Sbjct: 181 FMIDTHVDKNGLIETVPPVLVRDEAMYGTDKLPKFGEDSYRTTEGMWLVPTSEVPLTYIA 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + E+IE LP R+T FRSEAGSAGRDT GMLRQHQF K E+VS+T + S E + Sbjct: 241 AGEMIEQSYLPRRYTAHTLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSVTHPDASDDEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE IL+ L + YR V LCTGD+GF A +TYD+E WL GQ+ YREISS ST G+FQ Sbjct: 301 RMLGCAEGILEALKIPYRTVILCTGDMGFGARRTYDIEAWLPGQDAYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ +F HTLNGSG+AVGRCLIA+LEN ADGSVT+P L PY+ Sbjct: 361 ARRMNARFKPEGGGKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVTLPDALAPYLGGK 420 Query: 421 AVIKKEHIL 429 I E +L Sbjct: 421 TSITVEGVL 429 >gi|149241134|pdb|2DQ3|A Chain A, Crystal Structure Of Aq_298 gi|149241135|pdb|2DQ3|B Chain B, Crystal Structure Of Aq_298 Length = 425 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 203/428 (47%), Positives = 280/428 (65%), Gaps = 7/428 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +DI IR+ P+++ L R E + +L LD++ R +IK++E +R+ RN S +IG Sbjct: 2 IDINLIREKPDYVKERLATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKLSKEIG 61 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG + ++N LKE++ LE+E +V LK + IPN+P VP+G Sbjct: 62 KLKREGKDT--TEIQNRVKELKEEIDRLEEELRKVEEELKNTLLWIPNLPHPSVPVGEDE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ + H+EIGE LG++DF R KLSG+RF+V+ G A LERAL Sbjct: 120 KDNVEVRRWGEPRKFDFEPKPHWEIGERLGILDFKRGAKLSGSRFTVIAGWGARLERALI 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTN 238 F +DLHT + GY E+ P LV+ E + GTGQ+PKF +D++ C D +LIPT+EV LTN Sbjct: 180 NFXLDLHT-KKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKCERDNLYLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY EI++ ++LP+ T P +R EAG+ G+D RG++RQHQF K ELV I + S+ E Sbjct: 239 LYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPDTSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+++ AEE+L+ L L YRVV LCTGDLGFSA KTYD+EVW QN YREISSCS C + Sbjct: 299 LEKLVKDAEEVLQLLGLPYRVVELCTGDLGFSAAKTYDIEVWFPSQNKYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N+R++D + +F HTLNGSG+AVGR L AILENY DGSV +P VLR Y+ Sbjct: 359 FQARRXNTRFKDSKTGKNRFVHTLNGSGLAVGRTLAAILENYQQEDGSVVVPEVLRDYV- 417 Query: 419 NLAVIKKE 426 VI+ E Sbjct: 418 GTDVIRPE 425 >gi|229074077|ref|ZP_04207126.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-18] gi|229094737|ref|ZP_04225745.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-29] gi|229100803|ref|ZP_04231621.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-28] gi|229113691|ref|ZP_04243128.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228669757|gb|EEL25162.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228682610|gb|EEL36669.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228688675|gb|EEL42545.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-29] gi|228709040|gb|EEL61164.1| Seryl-tRNA synthetase [Bacillus cereus Rock4-18] Length = 424 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R N E + L+ R + + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKLLRTNFEEVKAKLQHRGEDLTEFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFAFEPKPHWDLATDLGVLDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|86147113|ref|ZP_01065430.1| seryl-tRNA synthetase [Vibrio sp. MED222] gi|85835178|gb|EAQ53319.1| seryl-tRNA synthetase [Vibrio sp. MED222] Length = 435 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 195/434 (44%), Positives = 265/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R E I L+EK + L K E+++A RNS S IGQ Sbjct: 1 MLDSKLLRAELDETAAKLARRGFTLDVETIRELEEKRKSLQMKTEELQALRNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + E L +L + E+ S L+ + IPN+P EVP G + Sbjct: 61 AKAKGDHEEAERILAEVGNLGAELDQAKVTLAELQSELEAITMSIPNLPDAEVPDGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ + ++H ++GE G +DF A K+SG+RF V+ G A L RA+ Q Sbjct: 121 DNVEVSRWGQPKTYDFEVKDHVDLGEMSGGLDFASAVKISGSRFIVMKGKFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 FM+DLHT EHGYTE+ P LV +++YGTGQ+PKF +D+F T+ LI Sbjct: 181 FMLDLHTDEHGYTEMYVPYLVNHDSLYGTGQLPKFGEDLFHTSPLTEQVSDVPLKTLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMVRDTITDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSAKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 PTVL+PYM + I Sbjct: 421 PTVLQPYMGGVTHI 434 >gi|258544668|ref|ZP_05704902.1| serine--tRNA ligase [Cardiobacterium hominis ATCC 15826] gi|258520086|gb|EEV88945.1| serine--tRNA ligase [Cardiobacterium hominis ATCC 15826] Length = 426 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 205/428 (47%), Positives = 274/428 (64%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +RQ+ + L+ R + L++ + K E ++A RNS SAQIGQ Sbjct: 1 MIDSKLLRQDAAAIAARLQSRGYTFPLDEYQRLEDARKTAQVKAEQLQATRNSLSAQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G DAL + + L + E++ E+ ++L L++ +PN P E VP+G + Sbjct: 61 AKKNG--ENADALMAQVAALDSEQKDSEQQYAEIQNALDALLATVPNPPHESVPVGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G +EH ++ +DFD KL+GARF+VL G LA L RA+ Q Sbjct: 119 DNLEVRRWGTPRVFDFPPKEHADLENI--GLDFDAGAKLAGARFTVLRGDLARLHRAIAQ 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 FM+D HT + GYTE+ P L +A++GTGQ+PKF +D+F T +LIPTSEVSLT Sbjct: 177 FMLDTHTRDEGYTEMYVPYLANAQALFGTGQLPKFEEDLFKTALGERHFYLIPTSEVSLT 236 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL + ++E LPL +T P FRSEAGS GRD RGM+RQHQF K E+V I E S+ Sbjct: 237 NLVADSVLEEADLPLYYTAHTPCFRSEAGSHGRDVRGMIRQHQFDKVEMVKIVAPETSYD 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E++ + AE IL++L+L YRVV LCTGD+GFSA KTYDLEVWL GQ YREISSCS C Sbjct: 297 ELEKLTANAENILQKLNLPYRVVLLCTGDMGFSAAKTYDLEVWLPGQGKYREISSCSNCT 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RRM +RYR +SK + HTLNGSG+AVGR L+AILENY NADGS+TIP L PYM Sbjct: 357 DFQARRMQARYRPKDSKKPQPVHTLNGSGLAVGRTLVAILENYQNADGSITIPEALLPYM 416 Query: 418 NNLAVIKK 425 + I+ Sbjct: 417 GGITEIRP 424 >gi|30018290|ref|NP_829921.1| seryl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|218233674|ref|YP_002364867.1| seryl-tRNA synthetase [Bacillus cereus B4264] gi|228918967|ref|ZP_04082348.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228956457|ref|ZP_04118255.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229039921|ref|ZP_04189687.1| Seryl-tRNA synthetase [Bacillus cereus AH676] gi|229107702|ref|ZP_04237340.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-15] gi|229125533|ref|ZP_04254567.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|229142822|ref|ZP_04271266.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|229148425|ref|ZP_04276683.1| Seryl-tRNA synthetase [Bacillus cereus m1550] gi|296500850|ref|YP_003662550.1| seryl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|46577219|sp|Q81JC4|SYS_BACCR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226701388|sp|B7HII5|SYS_BACC4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|29893830|gb|AAP07122.1| Seryl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|218161631|gb|ACK61623.1| serine--tRNA ligase [Bacillus cereus B4264] gi|228635034|gb|EEK91605.1| Seryl-tRNA synthetase [Bacillus cereus m1550] gi|228640636|gb|EEK97022.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228657917|gb|EEL13721.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|228675742|gb|EEL30948.1| Seryl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228727411|gb|EEL78602.1| Seryl-tRNA synthetase [Bacillus cereus AH676] gi|228803214|gb|EEM50034.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228840682|gb|EEM85942.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296321902|gb|ADH04830.1| seryl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 424 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFTYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|167624137|ref|YP_001674431.1| seryl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|189083586|sp|B0TUP4|SYS_SHEHH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|167354159|gb|ABZ76772.1| seryl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 428 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 193/429 (44%), Positives = 267/429 (62%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E L R E + L++K + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELEVTAERLATRGFILDVERLGKLEDKRKSLQVATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V + + +L E+L + E + L + +PN+P E PIG + Sbjct: 61 AKAKG--EDVAPIMAQVGSLGEELDAKKAELASLLDELNSIAMSVPNLPDESAPIGADES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H E+GE +G +DF A K++G+RF V+ G +A + RAL Q Sbjct: 119 ENVEVRRWGTPKEYDFEVKDHVELGENIGGLDFKNAVKITGSRFIVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV ++++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEDSLMGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I++ + LP++ T P FRSEAGS GRDTRG++RQHQF K ELV + + E+ Sbjct: 239 PLTNLVRDTIVDEEELPIKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEN 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + + AE +L++L L YR V LCTGD+GF + KTYD+EVWL QN +REISSCS Sbjct: 299 SMQALEELTAHAETVLQKLGLPYRTVVLCTGDMGFGSSKTYDIEVWLPAQNTFREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RY+ K HTLNGSG+AVGR L+A++ENY NADGS+T+P LR Sbjct: 359 NMQDFQARRMQARYKAKTDKKPSLLHTLNGSGLAVGRTLVAVIENYQNADGSITVPEALR 418 Query: 415 PYMNNLAVI 423 YM L I Sbjct: 419 GYMGGLEKI 427 >gi|332703094|ref|ZP_08423182.1| Seryl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] gi|332553243|gb|EGJ50287.1| Seryl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] Length = 426 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 196/427 (45%), Positives = 277/427 (64%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R N + + AL R+ ++ LD K R L+ + E +++ RN S ++ + Sbjct: 1 MLDLKFLRGNMDLVRQALANRNSSLSLDHFEELDRKRRELLLESETLKSERNKASGEVAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG +L E S E++ IL+ V ++ + IPN+P VP+G S Sbjct: 61 LKREGQ--DAQSLLGELSAKSERIKILDDLLKGVDDEVQGFLLTIPNIPHASVPVGKSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N ++R+ G+ + +EH+E+G ALG +DF+RA KL+G+RF VL G A LERAL Sbjct: 119 DNQVVRTWGEPKTFDFTPKEHWELGTALGGLDFERAAKLAGSRFVVLRGWAARLERALAA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNL 239 FM+D+ T EHGYTE+ P +V + M GTGQ+PKF +D+F +LIPT+EV LTNL Sbjct: 179 FMLDVQTCEHGYTEIVPPYMVNRQTMTGTGQLPKFEEDLFKLEGCDYYLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ E ++ LPL F P FRSEAGS G+DT+G++R HQF K ELV I + S+ + Sbjct: 239 HADETLDEDKLPLTFCAFTPCFRSEAGSYGKDTKGLVRLHQFHKVELVRIAHPDRSYEDL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M S AE IL++L L YRV++LCTGD+GFSA KTYDLEVWL GQ YREISSCS C +F Sbjct: 299 ELMTSHAETILQKLGLPYRVLALCTGDMGFSATKTYDLEVWLPGQGKYREISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R ++ ++K + THTLNGSG+AVGR ++A+LENY ADGS+ +P L+ YM Sbjct: 359 QARRAGIRCKEKSAKKSRLTHTLNGSGLAVGRTMVAVLENYQQADGSILVPEALKSYMGG 418 Query: 420 LAVIKKE 426 L +I+ E Sbjct: 419 LDIIRPE 425 >gi|295106322|emb|CBL03865.1| seryl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b] Length = 429 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 193/430 (44%), Positives = 271/430 (63%), Gaps = 5/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R N + A++ RH + LDE R I K E ++A RN+ S IG Sbjct: 1 MLDIKYVRDNQAAVAEAMENRHASWDAARFSELDETRRAAIAKEEALQAERNAASKSIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + G +A K + ++L ++ KE +L+ L+ PN+P + P+G S + Sbjct: 61 MMGAGQKDEAEAAKERVRAINDELAVIGKEREAADEALRDLLLATPNMPADSTPVGASED 120 Query: 121 ENILIRSVGKKPSA---IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N +R G + H+++G LG++DF+RA KL+ +RF +L G A LERA Sbjct: 121 DNPEVRRWGTPRDFAAEGFEMKPHWDLGPELGIIDFERAVKLARSRFILLGGLGARLERA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L FM D H GY E P + E + GTGQ+PKF +D+F TT+G +LIPT+EV LT Sbjct: 181 LINFMADTHA-SRGYKEWWCPAMANAETLTGTGQLPKFEEDLFHTTEGLYLIPTAEVQLT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+++ E++++ LPL++ P FR EAGSAGRDTRG++R HQF K E+V + E+SF Sbjct: 240 NIHAGEVLDAGQLPLKYCAFTPCFREEAGSAGRDTRGLIRVHQFDKVEMVKYAKPEESFD 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + E M++ AE IL+ L L YRV+SLCTGD+GFSA KTYDLEVWL N Y+EISSCS C Sbjct: 300 DLEAMVADAENILQLLGLPYRVISLCTGDIGFSAAKTYDLEVWLPSYNGYKEISSCSNCT 359 Query: 358 NFQSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +YRDP + K ++ HTLNGSG+AVGR + A++ENY DG+V +P VL PY Sbjct: 360 DFQARRANIKYRDPAAFKGSRYVHTLNGSGLAVGRTMAAVIENYQQPDGTVRVPDVLVPY 419 Query: 417 MNNLAVIKKE 426 M + VI E Sbjct: 420 MGGVEVIAPE 429 >gi|187776522|ref|ZP_02992995.1| hypothetical protein CLOSPO_00019 [Clostridium sporogenes ATCC 15579] gi|187775181|gb|EDU38983.1| hypothetical protein CLOSPO_00019 [Clostridium sporogenes ATCC 15579] Length = 426 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 187/428 (43%), Positives = 270/428 (63%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR NP + AL R + + +L LDE+ R ++ K+E ++++RN S++ Sbjct: 1 MLDLKRIRNNPNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + EG V + E L E++ + ++ ++ ++ IPN+P +VP G Sbjct: 61 VPKLKKEGK--DVSNIVAEMKNLSEEIKEFDATLAKIDEKIQYIMLRIPNIPNPQVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N+ IR+ + + H++IG L ++DF+RA K++G+RF+ G A LERA Sbjct: 119 TDEDNVEIRNWSEPTKFDFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT +HGYTE+ P +V +M GTGQ+PKF +D F ++ + IPT+EV + Sbjct: 179 VISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EI++ LPL+ + FRSEAGSAGRDTRG++RQHQF K ELV T+ E S+ Sbjct: 239 TNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE +LK L + YRVV +C GDLGF+A YDLEVW+ N Y EISSCS Sbjct: 299 EELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQSRR N RY++ ++ HTLNGSGVA+GR + AILENY N DGS+TIP VLRPY Sbjct: 359 EDFQSRRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILENYQNEDGSITIPEVLRPY 418 Query: 417 MNNLAVIK 424 M VIK Sbjct: 419 MGGREVIK 426 >gi|146282637|ref|YP_001172790.1| seryl-tRNA synthetase [Pseudomonas stutzeri A1501] gi|166223273|sp|A4VLU7|SYS_PSEU5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|145570842|gb|ABP79948.1| seryl-tRNA synthetase [Pseudomonas stutzeri A1501] Length = 426 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 275/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R + I +L+ + + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLVRTQLQDVAARLATRGYQLDVARIEALEAQRKTVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L ++E + S L +L+ IPN+P + VP+G Sbjct: 61 AKQRG--EDIAPLLADVDRMGSELESGKQELDRIQSELDQLMLSIPNLPHDSVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + ++H +GE G +DF+ A KLSGARF+++ G +A L RAL Q Sbjct: 119 ENVEVRRWGTPKAFDFPVQDHVALGEQHGWLDFETAAKLSGARFALMRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMIDLHT EHGY E P LV+ A+ GTGQ+PKF DD+F + +LIPT+EVSL Sbjct: 179 FMIDLHTREHGYEEAYTPYLVQAPALQGTGQLPKFEDDLFKISREGEADFYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ + EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I SF Sbjct: 239 TNIVAGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSF 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE++L+ L+L YRV+SLCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEELTGNAEKVLQLLELPYRVLSLCTGDMGFGATKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +RYR+P + + HTLNGSG+AVGR L+A+LENY ADG + +P VL+PY Sbjct: 359 GDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGRILVPEVLKPY 418 Query: 417 MNNLAVI 423 M + VI Sbjct: 419 MGGIEVI 425 >gi|303251272|ref|ZP_07337450.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252495|ref|ZP_07534391.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302649814|gb|EFL79992.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860087|gb|EFM92104.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 435 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 200/436 (45%), Positives = 268/436 (61%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + + ALK KR E + +L+EK + L K E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLDDVANALKVKRGFTLDVESVKALEEKRKALQVKTETLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + AL E + +L + +V +++L+ +PN+P +EVP+G Sbjct: 61 AAKARG--EDISALLAEVDNMGNELNEAKVALDQVQEEIRELLLSVPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + G+ ++H +GEAL +DF KL+ +RF V+ G LA L RAL Sbjct: 119 TENLEVSRWGEPRQFDFEVKDHVALGEALNGLDFAAGVKLTASRFVVMKGKLARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E + P LV + ++GTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPNETQRPFSL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EII+ SLPLR+T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQFEKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF + KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM++R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 +P VLRPYM + VI Sbjct: 419 VPEVLRPYMGGVEVIT 434 >gi|229170865|ref|ZP_04298470.1| Seryl-tRNA synthetase [Bacillus cereus MM3] gi|228612600|gb|EEK69817.1| Seryl-tRNA synthetase [Bacillus cereus MM3] Length = 424 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ L+ E V L++L+ IPN+P E P+G + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVARTWGEVKEFAYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|227112001|ref|ZP_03825657.1| seryl-tRNA synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328169|ref|ZP_03832193.1| seryl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 431 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 199/432 (46%), Positives = 267/432 (61%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIAL-KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R + + L +R + E + +E+ ++L + E+++A RNS S +IG Sbjct: 1 MLDPNLLRNELDAVAEKLLARRGFKLDVETLRKQEERRKVLQVETENLQAERNSRSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G ++ L+ E +TL E+L + E ++ + ++ L IPN+P + VP+G Sbjct: 61 AAKARG--EDIEPLRREVNTLGEKLDAAKAELDQLQNEIRDLALTIPNLPDDSVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N + G+ R+H E+GE +DF A KL+GARF V+ G +A L RAL Sbjct: 119 TQNQEVTRWGEPRKYDFPVRDHVELGEMAAGLDFAAAVKLTGARFVVMKGQIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPT 231 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F TT LIPT Sbjct: 179 QFMLDLHTQQHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTTPLSEEAESSSYALIPT 238 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV LTNL EI++ +SLPL+ T P FRSEAGS GRDTRG++R HQF K ELV I R Sbjct: 239 AEVPLTNLVRDEILDEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVR 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS E + + AE +L+ L L YR V LCTGD+GF + KTYDLEVWL Q+ YREIS Sbjct: 299 PEDSMQALEELTTHAETVLQLLKLPYRKVLLCTGDMGFGSTKTYDLEVWLPAQDTYREIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A+LENY ADG + +P Sbjct: 359 SCSNMWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVPE 418 Query: 412 VLRPYMNNLAVI 423 VLRPYM L I Sbjct: 419 VLRPYMGGLEFI 430 >gi|56697184|ref|YP_167548.1| seryl-tRNA synthetase [Ruegeria pomeroyi DSS-3] gi|67461635|sp|Q5LR07|SYS_SILPO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|56678921|gb|AAV95587.1| seryl-tRNA synthetase [Ruegeria pomeroyi DSS-3] Length = 430 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 208/429 (48%), Positives = 282/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R P S IL+LDE R I E +A +N S ++G Sbjct: 1 MHDIRAIRENPAAFDAALSRRGSAPVSSDILALDEARRGKILAAETAQADQNKASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ + K ++ ++ E E+ + L +L++ +PN+P E+VP G Sbjct: 61 AKARGDEAEFERLRALVAEKKAEIAAMQAEAKELDTQLSELLAGLPNLPAEDVPQGADEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G +EHF++ MDF+ A KLSGARF +L+G +A + RAL Q Sbjct: 121 DNVELHRWGTPREMDFAPKEHFDLASVQDGMDFETAAKLSGARFVLLSGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H+ ++G TEV+ P+LV E MYGTGQ+PKF +D + T +G WLIPTSEVSLTN+ Sbjct: 181 FMLDTHSEQNGLTEVNGPVLVLSEMMYGTGQLPKFGEDSYQTREGWWLIPTSEVSLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + I LP R+T + FRSEAGSAG+DTRGMLRQHQF K E+VS+T + S E + Sbjct: 241 NGSTIAEDYLPRRYTAHSLCFRSEAGSAGKDTRGMLRQHQFEKVEMVSVTHPDHSDAEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE IL+ L + YR + LCTGD+GF A +TYD+E WL GQN YREISS STCG+FQ Sbjct: 301 RMLRCAEGILEALGIPYRTIVLCTGDMGFGARRTYDIEAWLPGQNTYREISSVSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + +F HTLNGSG+AVGRCLIA+LEN NADGSVT+P L PY+ Sbjct: 361 ARRMNARFKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQNADGSVTLPQALAPYLGGK 420 Query: 421 AVIKKEHIL 429 + + L Sbjct: 421 LTLNTDGTL 429 >gi|84394178|ref|ZP_00992909.1| seryl-tRNA synthetase [Vibrio splendidus 12B01] gi|84375198|gb|EAP92114.1| seryl-tRNA synthetase [Vibrio splendidus 12B01] Length = 435 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 195/434 (44%), Positives = 265/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R E I L+EK + L K E+++A RNS S IGQ Sbjct: 1 MLDSKLLRAELDETAAKLARRGFTLDVETIRELEEKRKSLQMKTEELQALRNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + E L +L + E+ S L+ + IPN+P EVP G + Sbjct: 61 AKAKGDHEEAERILAEVGNLGAELDQAKVTLAELQSELETITMSIPNLPDAEVPDGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ + ++H ++GE G +DF A K+SG+RF V+ G A L RA+ Q Sbjct: 121 DNVEVSRWGQPKTYDFEVKDHVDLGEMSGGLDFASAVKISGSRFIVMKGKFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 FM+DLHT EHGYTE+ P LV +++YGTGQ+PKF +D+F T+ LI Sbjct: 181 FMLDLHTDEHGYTEMYVPYLVNHDSLYGTGQLPKFGEDLFHTSPLTEQVSDVPLKTLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMVRDTITDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSAKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 PTVL+PYM + I Sbjct: 421 PTVLQPYMGGVTHI 434 >gi|32033510|ref|ZP_00133837.1| COG0172: Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208344|ref|YP_001053569.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae L20] gi|166200593|sp|A3N0M8|SYS_ACTP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|126097136|gb|ABN73964.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 435 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 200/436 (45%), Positives = 269/436 (61%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + + ALK KR E + +L+EK + L K E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLDDVANALKVKRGFTLDVESVKALEEKRKALQVKTETLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + AL E + +L + +V + +++L+ +PN+P +EVP+G Sbjct: 61 AAKARG--EDISALLAEVDNMGNELNEAKVALDQVQAEIRELLLSVPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + G+ ++H +GEAL +DF KL+ +RF V+ G LA L RAL Sbjct: 119 TENLEVSRWGEPRQFDFEVKDHVALGEALNGLDFAAGVKLTASRFVVMKGKLARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E + P LV + ++GTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPNETQRPFSL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EII+ SLPLR+T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEIIDENSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQFEKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF + KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM++R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 +P VLRPYM + VI Sbjct: 419 VPEVLRPYMGGVEVIT 434 >gi|327480895|gb|AEA84205.1| seryl-tRNA synthetase [Pseudomonas stutzeri DSM 4166] Length = 426 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 275/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R + I +L+ + + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLVRTQLQDVAARLATRGYQLDVARIEALEAQRKTVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L ++E + S L +L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLLADVDRMGSELESGKQELDRIQSELDQLMLSIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + ++H +GE G +DF+ A KLSGARF+++ G +A L RAL Q Sbjct: 119 ENVEVRRWGTPKAFDFPVQDHVALGEQHGWLDFETAAKLSGARFALMRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMIDLHT EHGY E P LV+ A+ GTGQ+PKF DD+F + +LIPT+EVSL Sbjct: 179 FMIDLHTREHGYEEAYTPYLVQAPALQGTGQLPKFEDDLFKISREGEADFYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ + EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I SF Sbjct: 239 TNIVAGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSF 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE++L+ L+L YRV+SLCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEELTGNAEKVLQLLELPYRVLSLCTGDMGFGATKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +RYR+P + + HTLNGSG+AVGR L+A+LENY ADG + +P VL+PY Sbjct: 359 GDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGRILVPEVLKPY 418 Query: 417 MNNLAVI 423 M + VI Sbjct: 419 MGGIEVI 425 >gi|307261353|ref|ZP_07543028.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869084|gb|EFN00886.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 435 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 200/436 (45%), Positives = 269/436 (61%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + + ALK KR E + +L+EK + L K E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLDDVANALKVKRGFTLDVESVKALEEKRKALQVKTETLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + AL E + +L + +V + +++L+ +PN+P +EVP+G Sbjct: 61 AAKARG--EDISALLAEVDNMGNELNEAKVALDQVQAEIRELLLSVPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + G+ ++H +GEAL +DF KL+ +RF V+ G LA L RAL Sbjct: 119 TENLEVSRWGEPRQFDFEVKDHVALGEALNGLDFAAGVKLTASRFVVMKGKLARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E + P LV + ++GTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPNETQRPFSL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EII+ SLPLR+T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQFEKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF + KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMKALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM++R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 +P VLRPYM + VI Sbjct: 419 VPEVLRPYMGGVEVIT 434 >gi|165976289|ref|YP_001651882.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190150196|ref|YP_001968721.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252866|ref|ZP_07339025.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247856|ref|ZP_07529892.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307250109|ref|ZP_07532071.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307263534|ref|ZP_07545149.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238687564|sp|B0BPF3|SYS_ACTPJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238692394|sp|B3H1K7|SYS_ACTP7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|165876390|gb|ABY69438.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915327|gb|ACE61579.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648296|gb|EFL78493.1| seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855658|gb|EFM87825.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306857840|gb|EFM89934.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306871177|gb|EFN02906.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 435 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 200/436 (45%), Positives = 269/436 (61%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + + ALK KR E + +L+EK + L K E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLDDVANALKVKRGFTLDVESVKALEEKRKALQVKTETLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + AL E + +L + +V + +++L+ +PN+P +EVP+G Sbjct: 61 AAKARG--EDISALLAEVDNMGNELNEAKVALDQVQAEIRELLLSVPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + G+ ++H +GEAL +DF KL+ +RF V+ G LA L RAL Sbjct: 119 TENLEVSRWGEPRQFDFEVKDHVALGEALNGLDFAAGVKLTASRFVVMKGKLARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E + P LV + ++GTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPNETQRPFSL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EII+ SLPLR+T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQFEKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF + KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM++R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 +P VLRPYM + VI Sbjct: 419 VPEVLRPYMGGVEVIT 434 >gi|89100960|ref|ZP_01173806.1| seryl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89084331|gb|EAR63486.1| seryl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 426 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 192/427 (44%), Positives = 262/427 (61%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R LI + E +++RRN S Q+ Sbjct: 1 MLDIKYLRSNFEEVKNRLQHRGEDLGDLGKFEDLDVRRRELIMETEQLKSRRNEVSQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D+L E + +++ ++E V SL L+ IPN+P E VP+G + Sbjct: 61 VLKREKK--DADSLIAEMREVGDKIKAFDEELRTVEESLDSLLMSIPNIPHESVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ R G + H++I L ++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVEARKWGNVRDFSFEPKPHWDIATDLDILDFERAGKVTGSRFVFYKGLGARLERALF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMLDLHTEEHGYMEVLPPYMVNRASMTGTGQLPKFEEDAFLIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ ++ LP+ + + FRSEAGSAGRDTRG++RQHQF K ELV R EDS+ E Sbjct: 239 MHRDEILTNEQLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVRPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE++L+ L L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTGHAEKVLQLLGLPYRVLSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+A+GR + AILENY DGSV IP VLRPYM Sbjct: 359 FQARRANIRFRREPKGKPEHLHTLNGSGLAIGRTVAAILENYQQEDGSVIIPEVLRPYMG 418 Query: 419 NLAVIKK 425 N VI K Sbjct: 419 NKEVIGK 425 >gi|134295006|ref|YP_001118741.1| seryl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|166201241|sp|A4JCA3|SYS_BURVG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|134138163|gb|ABO53906.1| seryl-tRNA synthetase [Burkholderia vietnamiensis G4] Length = 433 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 196/430 (45%), Positives = 272/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + +++ E + E+ S L L+ +PN+ E VP+G Sbjct: 61 MKGKG--EDTSAVMAEVGGIGDEMKASEVKLGEIQSRLSDLMLGMPNIAHESVPVGKDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 119 DNVELRRWGTPRQFDFDVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT HGY+E P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMLDTHTQLHGYSETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGAENTITQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + + Sbjct: 238 ISLTNTVRESIVDASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 TSYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P VL Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGMERI 426 >gi|261868430|ref|YP_003256352.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413762|gb|ACX83133.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 438 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 203/437 (46%), Positives = 271/437 (62%), Gaps = 14/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R NP + LK KR + I L+E+ + L K E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNPADVAEKLKIKRGFVLDTAKITQLEEQRKALQVKTENLQAERNARSRAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + E+L + E +V ++L + IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEVDHMAEELEQGKIELDKVQNALNDIALNIPNIPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G+ ++H +GE L +DF A KL+G+RF V+ G +A L RA+ Sbjct: 119 SENLEVSRWGEPRKFDFEVKDHVTLGENLQGLDFAAAVKLTGSRFVVMKGQIAKLHRAIA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWL 228 QFM+DLHT +HGYTE P LV + +YGTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYTEAYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLEGQDPNEVQRTYGL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EI+++++LPL+ T P FRSEAGS GRDTRG++R HQF K ELV Sbjct: 239 IPTAEVPVTNLVRGEILDAENLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF +CKTYDLEVW+ QN YR Sbjct: 299 IVEPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMQARCRSKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIKK 425 +P VLRPYM L VI K Sbjct: 419 VPEVLRPYMGGLDVIGK 435 >gi|119774911|ref|YP_927651.1| seryl-tRNA synthetase [Shewanella amazonensis SB2B] gi|166223284|sp|A1S6H5|SYS_SHEAM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|119767411|gb|ABL99981.1| seryl-tRNA synthetase [Shewanella amazonensis SB2B] Length = 428 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 193/429 (44%), Positives = 266/429 (62%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E L R +++ +L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDTKYLRNELEFTKERLAARGFALDIDHLKALEEKRKSLQVATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G V + + L +L + E + + + +PN+P E VP+G + Sbjct: 61 AKSRG--EDVAPIMAQVGNLGTELEAKKIELAALLEEINAIAMSVPNLPDESVPVGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ IR G+ S ++H ++GE LG +DF A K++G+RF V+ G +A + RAL Q Sbjct: 119 ENVEIRRWGEPRSFDFAVKDHVDLGETLGGLDFKSAVKITGSRFIVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEV 234 FM+DLHT EHGYTE PLLV +++ GTGQ+PKF++D+F LIPT+EV Sbjct: 179 FMLDLHTIEHGYTEAYVPLLVNTDSLLGTGQLPKFSEDLFNLKPATEEGQALSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL I++ LP++ T FRSEAGS G+DTRG++RQHQF K E+V I + E+ Sbjct: 239 PVTNLVRDTILDEADLPIKITAHTACFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVKPEN 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E+M+ AE +LK+L L YR V LCTGD+GF A KTYD+EVWL QN YREISSCS Sbjct: 299 SMDALEQMVGHAENVLKKLGLPYRTVVLCTGDMGFGAAKTYDIEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR HTLNGSG+AVGR L+AILENY NADG+VT+P LR Sbjct: 359 NVKDFQARRMQARYRSKEDNKPALVHTLNGSGLAVGRTLVAILENYQNADGTVTVPEALR 418 Query: 415 PYMNNLAVI 423 PYM + + Sbjct: 419 PYMGGIEQL 427 >gi|307545960|ref|YP_003898439.1| seryl-tRNA synthetase [Halomonas elongata DSM 2581] gi|307217984|emb|CBV43254.1| seryl-tRNA synthetase [Halomonas elongata DSM 2581] Length = 442 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 270/425 (63%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + E + L KR +E + +L+ + R L + E ++ RN+ S IG+ Sbjct: 17 MLDPKLLRSDLEGVAQRLAKRGFALDTERLAALESRRRELQAETERLQNERNTRSKSIGK 76 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L +E S L ++L + EV + + +S +PN+P E VP G S + Sbjct: 77 AKANG--EDIQPLLDEVSDLGDRLDAAKTRLAEVQAEWDEQVSGLPNLPHESVPEGQSED 134 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G + R+H ++G G +DFD A+KL+GARF+V+ G +A L RAL Q Sbjct: 135 DNVELHRWGTPRTFDFEIRDHVDLGAQTGQLDFDLASKLTGARFAVMRGTIARLHRALTQ 194 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLI--PTSEVSLTN 238 FM+D T EHGY E P +V D+++YGTGQ+PKF +D+F D R PT+EV LTN Sbjct: 195 FMLDKQTLEHGYEECYVPYMVNDDSLYGTGQLPKFGEDLFRLEDERGYRLIPTAEVPLTN 254 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EIIE K+LP+R T P FRSEAGS GRDTRGM+RQHQF K E+V + S+ Sbjct: 255 FARDEIIEHKALPVRLTAHTPCFRSEAGSHGRDTRGMIRQHQFDKVEMVQLVEPSTSYDT 314 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ LDL YRVV+LCTGD+G A KTYDLEVWL Q YREISS S C + Sbjct: 315 LEEMRGHAEAILQALDLPYRVVTLCTGDMGAGAAKTYDLEVWLPSQETYREISSVSNCED 374 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R P+ K + HTLNGSG+AVGRCLIA++EN+ NADGS+++P LR YM Sbjct: 375 FQARRMQARFRHPDEKKPQLLHTLNGSGLAVGRCLIAVMENHQNADGSISVPEALRAYMG 434 Query: 419 NLAVI 423 + I Sbjct: 435 GMETI 439 >gi|85712402|ref|ZP_01043452.1| seryl-tRNA synthetase [Idiomarina baltica OS145] gi|85693845|gb|EAQ31793.1| seryl-tRNA synthetase [Idiomarina baltica OS145] Length = 430 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 205/431 (47%), Positives = 263/431 (61%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++ R+ + LK R E + I +L+E+ + + K E ++A RNS S IG+ Sbjct: 1 MLDAKYFREELQQTAERLKTRGFELNIDEIQALEEQRKSIQVKTEQLQAERNSRSKAIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + S L QL ++E EV L LI +PN+P E VP G + Sbjct: 61 AKQAG--EDIQPLLDAVSDLGSQLDAAKEELREVQDKLGALIMGVPNLPAEGVPEGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEA-LGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G+ P ++H E+ EA MDF+ A KL+GARF V+ G +A L RAL Sbjct: 119 ENQEISVWGEPPQLDFEPKDHVELAEALAKGMDFEAAAKLTGARFVVMRGKIARLHRALT 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------DGRWLIPTSE 233 QFM+D HT HGY E P LV +++YGTGQ+PKF D+F LIPT+E Sbjct: 179 QFMLDTHTEAHGYAETYVPYLVNHDSLYGTGQLPKFGKDLFHIQGETEEQIPLSLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTNL EI + LP++ T P FRSEAGS GRDTRG++RQHQF K ELV + E Sbjct: 239 VPLTNLARDEIFDEAELPVKLTAHTPCFRSEAGSHGRDTRGLIRQHQFDKVELVWLAHPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E++ AE IL++L L YR V LCTGD+GF A KTYDLEVWL QN YREISSC Sbjct: 299 QSMDALEQLTQHAETILQKLGLAYRKVLLCTGDMGFGATKTYDLEVWLPAQNTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S G+FQ+RRM +R+R +K + HTLNGSG+AVGR L+A+LENY ADGS+ IP VL Sbjct: 359 SNMGDFQARRMQARFRRKGAKKPELLHTLNGSGLAVGRTLVALLENYQQADGSIVIPEVL 418 Query: 414 RPYMNNLAVIK 424 RPYM + I+ Sbjct: 419 RPYMGGIERIE 429 >gi|161611255|ref|YP_296799.2| seryl-tRNA synthetase [Ralstonia eutropha JMP134] Length = 434 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 198/437 (45%), Positives = 270/437 (61%), Gaps = 15/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ R++ + + L R + +L+ + + L + E++++RRNS S QIG Sbjct: 1 MLDIQLFRKDIDAVAQRLATRGFQLDVAAFQALESERKQLQTQTEELQSRRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + L E+ + L +L+ IPN+P E VP+G Sbjct: 61 LKGKG--EDASAVMAEVGGIGDTLKDSAARLEEIQAQLSELMLSIPNLPHESVPLGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG+ R+H ++G+ LG +DFD A K++G+RFS+L G +A + RAL Q Sbjct: 119 QNVEVRRVGEPRKFDFEVRDHVDVGDKLG-LDFDTAAKVTGSRFSMLRGGMARMHRALVQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 M+D HT EHGYTE+ P +V +M GTGQ+PKF +D+F +LI Sbjct: 178 LMLDTHTLEHGYTEMYVPYIVNAASMRGTGQLPKFEEDLFKVPRKVGGEDGERTENFYLI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN+ I+ LPLRF P FRSEAGS G+DTRGM+RQHQF K ELV + Sbjct: 238 PTAEVPLTNIVRDAIVAGDKLPLRFVAHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVHV 297 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E SF E++ AE ILK+L+L +R + LCTGD+GF + KTYDLEVW+ QN YRE Sbjct: 298 VPAEQSFDALEQLTGHAEAILKKLELPFRTIVLCTGDMGFGSTKTYDLEVWIPAQNTYRE 357 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS G+FQ+RRM +RYR K + HTLNGSG+AVGR L+AILENY NADGSVT+ Sbjct: 358 ISSCSNMGDFQARRMQARYRVGQGK-PELVHTLNGSGLAVGRTLVAILENYQNADGSVTV 416 Query: 410 PTVLRPYMNNLAVIKKE 426 PT L+PYM ++ E Sbjct: 417 PTALQPYMGGTTRLEPE 433 >gi|72119692|gb|AAZ61955.1| seryl-tRNA synthetase [Ralstonia eutropha JMP134] Length = 445 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 198/437 (45%), Positives = 270/437 (61%), Gaps = 15/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ R++ + + L R + +L+ + + L + E++++RRNS S QIG Sbjct: 12 MLDIQLFRKDIDAVAQRLATRGFQLDVAAFQALESERKQLQTQTEELQSRRNSLSKQIGM 71 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + L E+ + L +L+ IPN+P E VP+G Sbjct: 72 LKGKG--EDASAVMAEVGGIGDTLKDSAARLEEIQAQLSELMLSIPNLPHESVPLGKDET 129 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG+ R+H ++G+ LG +DFD A K++G+RFS+L G +A + RAL Q Sbjct: 130 QNVEVRRVGEPRKFDFEVRDHVDVGDKLG-LDFDTAAKVTGSRFSMLRGGMARMHRALVQ 188 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 M+D HT EHGYTE+ P +V +M GTGQ+PKF +D+F +LI Sbjct: 189 LMLDTHTLEHGYTEMYVPYIVNAASMRGTGQLPKFEEDLFKVPRKVGGEDGERTENFYLI 248 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN+ I+ LPLRF P FRSEAGS G+DTRGM+RQHQF K ELV + Sbjct: 249 PTAEVPLTNIVRDAIVAGDKLPLRFVAHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVHV 308 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E SF E++ AE ILK+L+L +R + LCTGD+GF + KTYDLEVW+ QN YRE Sbjct: 309 VPAEQSFDALEQLTGHAEAILKKLELPFRTIVLCTGDMGFGSTKTYDLEVWIPAQNTYRE 368 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS G+FQ+RRM +RYR K + HTLNGSG+AVGR L+AILENY NADGSVT+ Sbjct: 369 ISSCSNMGDFQARRMQARYRVGQGK-PELVHTLNGSGLAVGRTLVAILENYQNADGSVTV 427 Query: 410 PTVLRPYMNNLAVIKKE 426 PT L+PYM ++ E Sbjct: 428 PTALQPYMGGTTRLEPE 444 >gi|294141063|ref|YP_003557041.1| seryl-tRNA synthetase [Shewanella violacea DSS12] gi|293327532|dbj|BAJ02263.1| seryl-tRNA synthetase [Shewanella violacea DSS12] Length = 428 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 198/429 (46%), Positives = 269/429 (62%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R E L R E + L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKLLRNELEVTAERLATRGFILDVERLSKLEEKRKSLQMTTEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V + + L +L + E + + L + +PN+P E P+G + Sbjct: 61 AKAKG--EDVAPIMAKVGDLGTELDAKKSELAALLAELNAIAMSVPNLPDESAPLGADES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++GEALG +DF A KL+G+RF ++ G +A + RAL Q Sbjct: 119 ENVEVRRWGTPREFNFEVKDHVDLGEALGGLDFKNAVKLTGSRFIIMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT EHGYTE PLLV +++++GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTDEHGYTEAYVPLLVNEDSLFGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL II+ LP++ T P FRSEAGS GRDTRG++RQHQF K ELV + + ED Sbjct: 239 PLTNLARDTIIDEDELPVKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQMVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S + + AE +L++LDL YR V LCTGD+GF A KT+D+EVWL QN +REISSCS Sbjct: 299 SMAALDALTGHAETVLQKLDLPYRTVILCTGDMGFGASKTFDIEVWLPAQNTFREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RY+ ++K HTLNGSG+AVGR L+A+LENY N DGS+T+P VLR Sbjct: 359 NMQDFQARRMQARYKAKSAKKPALLHTLNGSGLAVGRTLVAVLENYQNEDGSITVPEVLR 418 Query: 415 PYMNNLAVI 423 PYMN L I Sbjct: 419 PYMNGLEKI 427 >gi|225076272|ref|ZP_03719471.1| hypothetical protein NEIFLAOT_01312 [Neisseria flavescens NRL30031/H210] gi|224952396|gb|EEG33605.1| hypothetical protein NEIFLAOT_01312 [Neisseria flavescens NRL30031/H210] Length = 431 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 197/433 (45%), Positives = 272/433 (62%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLAARGYEFDTARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKVDLEQAAADLDAVQKELDAWLLTIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMKGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLKHGYTEHYTPYIVDDLTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + I+ LPL+ T +P FRSEAG+ G+D RG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIVAGSDLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ +P L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINVPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM + ++ + Sbjct: 419 QPYMGGVTKLEVK 431 >gi|261381397|ref|ZP_05985970.1| serine--tRNA ligase [Neisseria subflava NJ9703] gi|284795610|gb|EFC50957.1| serine--tRNA ligase [Neisseria subflava NJ9703] Length = 431 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 196/433 (45%), Positives = 272/433 (62%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLAARGYEFDTARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP+G Sbjct: 61 LKGQGKHEEAQAAMDQVTQIKADLEQAAADLDAVQKELDAWLLSIPNLPHESVPVGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMKGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLKHGYTEHYTPYIVDDLTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + I+ PL+ T +P FRSEAG+ G+D RG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIVAGSDFPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ +P L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINVPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM + ++ + Sbjct: 419 QPYMGGVTKLEVK 431 >gi|90021342|ref|YP_527169.1| seryl-tRNA synthetase [Saccharophagus degradans 2-40] gi|123396207|sp|Q21K22|SYS_SACD2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|89950942|gb|ABD80957.1| seryl-tRNA synthetase [Saccharophagus degradans 2-40] Length = 426 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 270/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + LKKR E ++ +L+E+ R L E ++ RN+ S IG+ Sbjct: 1 MLDPKLLRNQLNDVAENLKKRGYELDTQAFTALEERRRTLQTACESLQQERNTRSKNIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E LK L E+ + L+ L+S IPN+ ++VP G S + Sbjct: 61 AKAAG--EDIGPLLQEVDNLKSALAEAEQNLQALQGELEALVSAIPNMVHDDVPAGKSED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ + ++H ++G A+G +DF+ ATK++GARFS++ G +A + RAL Q Sbjct: 119 DNVEISKWGEPKTFDFEVQDHVDVGAAIGGLDFETATKITGARFSLMRGDIASMHRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR--WLIPTSEVSLTN 238 M++ H EH Y EV P +V +++YGTGQ+PKF +D+F TD R +LIPT+EV +TN Sbjct: 179 LMLNTHIDEHKYEEVYVPYIVNKDSLYGTGQLPKFEEDLFKLTDDREFYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI + LP+RF P FRSEAGS GRDTRGM+RQHQF K ELV + + EDS Sbjct: 239 IARGEIFDESQLPVRFVAHTPCFRSEAGSYGRDTRGMIRQHQFEKVELVQLVKPEDSLNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE IL++L L YR V LC GD+GFSA KTYDLEVW+ Q YREISSCS G+ Sbjct: 299 LEELTQHAEAILQKLGLPYRKVVLCGGDIGFSATKTYDLEVWIPSQGKYREISSCSCFGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR+ + + HT+NGSG+AVGR L+A+LENY DGSV IP L+PYMN Sbjct: 359 FQARRMMARYRNSETNKPELLHTINGSGLAVGRTLVAVLENYQREDGSVEIPAALQPYMN 418 Query: 419 NLAVIKK 425 VI K Sbjct: 419 GKTVIAK 425 >gi|260888172|ref|ZP_05899435.1| serine--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|260862201|gb|EEX76701.1| serine--tRNA ligase [Selenomonas sputigena ATCC 35185] Length = 430 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 189/426 (44%), Positives = 277/426 (65%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R + + + L+KR + L+EK R L+++ E+++ARRNS S +IG Sbjct: 6 MLDIKFVRDHIDEVQAMLEKRCNPLKLSGFKELEEKRRTLLQEAEELKARRNSVSKEIGA 65 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G V A+ E + +++ L+ EV L ++ IPN+P ++VPIG Sbjct: 66 KKKQG--EDVAAISAEMREVGKKIADLDARTREVEDELHTILLNIPNMPKDDVPIGKDDT 123 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G+ + + H+++G L ++D +RA K++GARF+ G A LERA Sbjct: 124 ENPEVRRWGEPRTFTFEPKAHWDLGADLEILDAERAAKVTGARFTFYKGLGARLERACIN 183 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLH ++HGYTE+ AP + + +M GTGQ+PKFA+DMF +L+PT+EV TN Sbjct: 184 FMMDLHATKHGYTEMLAPYIANEASMIGTGQLPKFAEDMFKLEGLDYYLVPTAEVPTTNY 243 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ + LP R+T+ FR+EAGSAGRDTRG++RQHQF K EL+ T+ E+S+ E Sbjct: 244 HRDEILDGRKLPERYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFTKPEESWDEL 303 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M+ AE++L+ L++ Y VV LCTGD+ F++ KTYD+EVW+ QN YREISSCS C ++ Sbjct: 304 EGMVDAAEDVLRILEIPYHVVLLCTGDMSFTSAKTYDIEVWMPAQNTYREISSCSNCLDY 363 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSG+AVGR + AILENY DGSV +P L PYM Sbjct: 364 QARRANIKFRREPKAKPEFCHTLNGSGLAVGRTVAAILENYQQEDGSVRVPKALVPYMGG 423 Query: 420 LAVIKK 425 + VI+K Sbjct: 424 VEVIEK 429 >gi|261493580|ref|ZP_05990100.1| serine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310762|gb|EEY11945.1| serine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 435 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 201/436 (46%), Positives = 272/436 (62%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N E + ALK KR+ E + +L+E+ + L K E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLEDVATALKIKRNFILDVERVKTLEEQRKTLQVKTETLQAERNTRSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + AL E ++ +L + E +V + +++L+ +PN+P +E+P+G Sbjct: 61 AAKARG--EDISALLAEVDSMGNELDTAKVELDKVQAEIRELLLSVPNLPADEIPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G+ ++H +GE L +DF KL+ +RF V+ G LA L RAL Sbjct: 119 SENLEVLRWGEPRQFDFEVQDHVTLGENLNGLDFAAGVKLTASRFVVMKGKLARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E + P LV + +YGTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDLFHTQPLTGQDPNEVQRPFGL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EII+ SLPLR+T P FR+EAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRAEAGSYGRDTRGLIRMHQFEKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF A KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGAAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM++R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 +P VLRPYM L VI Sbjct: 419 VPEVLRPYMGGLEVIT 434 >gi|297616225|ref|YP_003701384.1| seryl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297144062|gb|ADI00819.1| seryl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 423 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 199/425 (46%), Positives = 276/425 (64%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NPE ++ AL R ++ + L LD++ R + ++++ RN S ++G+ Sbjct: 1 MLDPRLVRANPEMVEKALSARGIQGGLDQFLKLDKERRACQVRADELKNFRNQASVEVGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + + L+ + +++ L+ E+ L +++ IPN+P E VP+G Sbjct: 61 LKKEGKDT--NELQARIREVGQEIKGLDDRMREIDEQLTEILLNIPNLPHESVPLGAGDA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + H++IG AL ++DF+RA KLSGARF+V G A LERAL Sbjct: 119 DNVEVRRWGEPRKFDFEPQAHWDIGVALDILDFERAAKLSGARFTVYKGLGARLERALIS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+DLH +HGY EV P +V + M GTGQ+PKFA+DMF +++PT+EV LTNL Sbjct: 179 FMLDLHVDKHGYREVFPPFMVTADCMVGTGQLPKFAEDMFKVEGRELYMVPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+ ++ LP+ T FR+EAGS GRDTRG++RQHQF K ELV IT E S+ E Sbjct: 239 YREEILAAEQLPMYLTAYTACFRAEAGSHGRDTRGIIRQHQFNKVELVKITSPETSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEE+L+ L L YRV+ LCTGD+GFS+ KTYDLEVWL Y+EISSCS CG+F Sbjct: 299 EKLTRDAEEVLQLLGLPYRVMLLCTGDMGFSSAKTYDLEVWLPSYGEYKEISSCSNCGDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYR + +F HTLNGSGVAVGR + AILENY AD SV +P +LRPYM Sbjct: 359 QARRANIRYRPEPNARPQFVHTLNGSGVAVGRTVAAILENYQQADSSVVVPEILRPYMGG 418 Query: 420 LAVIK 424 +AVI+ Sbjct: 419 IAVIR 423 >gi|196251172|ref|ZP_03149848.1| seryl-tRNA synthetase [Geobacillus sp. G11MC16] gi|196209313|gb|EDY04096.1| seryl-tRNA synthetase [Geobacillus sp. G11MC16] Length = 424 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R + + L +R + + LD++ R LI ++E+++++RN S QI Sbjct: 1 MLDVKLLRTQFQEVKEKLLQRGDDLANIDRFEQLDKERRRLIAQVEELKSKRNEVSQQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E ++L E + +++ ++++ ++ L L+ IPNVP E VP+G S Sbjct: 61 VLKREKK--DAESLIAEMREVGDRIKQMDEQIRQLEEELDSLLLSIPNVPHESVPVGQSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ S + H++I + LGL+DF+RA K++G+RF G A LERAL Sbjct: 119 EDNVEVRRWGEPRSFSFEPKPHWDIADQLGLLDFERAAKVAGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D+H E GY EV P LV +M GTGQ+PKFA+D F + + IPT+EV +TN Sbjct: 179 NFMLDIHLDEFGYQEVLPPYLVNRASMIGTGQLPKFAEDAFHLDNEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ + LPL + + FR+EAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 LHRDEILTADDLPLYYAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+RL L YRVV+LCTGDLGFSA KTYD+EVWL YREISSCS Sbjct: 299 LEKLTHQAETILQRLGLPYRVVALCTGDLGFSAAKTYDIEVWLPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY DGSV IP LRPYM Sbjct: 359 FQARRANIRFRREPKAKPEYVHTLNGSGLAIGRTVAAILENYQQEDGSVVIPEALRPYMG 418 Query: 419 NLAVIK 424 N VI+ Sbjct: 419 NRDVIR 424 >gi|269837655|ref|YP_003319883.1| seryl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] gi|269786918|gb|ACZ39061.1| seryl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] Length = 427 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 188/430 (43%), Positives = 275/430 (63%), Gaps = 4/430 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ IR+ P+ + AL K + E + IL LDE+ R L+ ++E+++ARRN+ S +I + Sbjct: 1 MIDLRLIREQPDLVREALAKLNTEAPIDEILELDERRRALLAEVEELKARRNAGSKEISR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 DA E L +++ L+ + E ++L+ L+ +PN+P +VP+G + Sbjct: 61 LAP---GPERDARIAEMRGLGDKIQELDAQVAETDAALRDLLLQVPNLPDPDVPVGPDES 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+++R G+ + R H+EIGE LGL+DF+R K+SG+RF G +A L+RAL Sbjct: 118 ANVVVRHWGEPRDFPYPVRPHWEIGEELGLIDFERGVKVSGSRFYFFRGDMARLQRALAT 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNL 239 +MIDLH EHGYTE+ AP+LVR +A+ GTG +PKF D ++ + WLIPT+EV +TNL Sbjct: 178 WMIDLHVREHGYTELYAPVLVRPDALIGTGNLPKFGDALYRDDESDLWLIPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ EI+++ +LP+ P FR E SAGRD RG+ R HQF K E+V E S E Sbjct: 238 YADEILDADALPIYHVAQTPCFRREQLSAGRDVRGIKRVHQFEKVEMVKFVAPETSDDEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++ AEE+L+RL++ YRVV +CTGDL F+A K +DLE W G + E+SSCS +F Sbjct: 298 NSLVANAEEVLQRLNIPYRVVQMCTGDLSFTAAKKFDLEAWAPGSQDWLEVSSCSNFRDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYR + +F HTLNGSG+A+ R LIAI+ENY DG++ IP VLRPYM Sbjct: 358 QARRANIRYRPADGARPQFVHTLNGSGLALPRTLIAIMENYQREDGTIEIPEVLRPYMGG 417 Query: 420 LAVIKKEHIL 429 VI ++ + Sbjct: 418 QEVIGRQPVF 427 >gi|254361093|ref|ZP_04977238.1| serine--tRNA ligase [Mannheimia haemolytica PHL213] gi|261495418|ref|ZP_05991866.1| serine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153092579|gb|EDN73634.1| serine--tRNA ligase [Mannheimia haemolytica PHL213] gi|261308923|gb|EEY10178.1| serine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] Length = 435 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 202/436 (46%), Positives = 272/436 (62%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N E + ALK KR+ E + +L+E+ + L K E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLEDVATALKIKRNFILDVERVKTLEEQRKTLQVKTETLQAERNTRSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + AL E ++ +L + E +V + +++L+ +PN+P +EVP+G Sbjct: 61 AAKARG--EDISALLAEVDSMGNELDTAKVELDKVQAEIRELLLSVPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G+ ++H +GE L +DF KL+ +RF V+ G LA L RAL Sbjct: 119 SENLEVLRWGEPRQFDFEVQDHVTLGENLNGLDFAAGVKLTASRFVVMKGKLARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E + P LV + +YGTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDLFHTQPLTGQDPNEVQRPFGL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EII+ SLPLR+T P FR+EAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRAEAGSYGRDTRGLIRMHQFEKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF A KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGAAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM++R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 +P VLRPYM L VI Sbjct: 419 VPEVLRPYMGGLEVIT 434 >gi|70731235|ref|YP_260976.1| seryl-tRNA synthetase [Pseudomonas fluorescens Pf-5] gi|123654458|sp|Q4K9V7|SYS_PSEF5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|68345534|gb|AAY93140.1| seryl-tRNA synthetase [Pseudomonas fluorescens Pf-5] Length = 426 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 274/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R N + + L R I +L+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + S L ++ IPN+P E VP+G + Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSSGKAELENIQSELDSILFGIPNLPHESVPVGEDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTAFDFPIKDHVALGETHGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LHT EHGY E P LV+ A+ GT Q+PKF +D+F T +LIPT+EVSL Sbjct: 179 FMINLHTGEHGYEEAYTPYLVQAPALVGTSQLPKFEEDLFKITREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ + EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V + S Sbjct: 239 TNIVAGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSTSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE++L+ L L YRV++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAEKVLQLLQLPYRVLALCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPDVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|255658869|ref|ZP_05404278.1| serine--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260849274|gb|EEX69281.1| serine--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 426 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 268/426 (62%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R++ + + LK R + LD+K R L+++ E ++++RN+ S +I Sbjct: 1 MLDIKFVREHLDEVRQMLKNRCNPLNLDDFEGLDKKRRELLQESEALKSQRNTVSKEISV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L E + ++ L+KE +V + L+ ++ IPN+P E+VPIG Sbjct: 61 MKKNKEDAEAKIL--EMRAVGAKISELDKELKDVEAQLRDIMLHIPNMPREDVPIGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G+ + H+++G L ++D DRA K++GARF+ G A LERA Sbjct: 119 ENPEVRKWGEPTKFDFEPKAHWDLGTELDILDADRAAKVTGARFTFYKGLGARLERACIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLH ++HGYTE+ AP + E+M GTGQ+PKFADDMF +L+PT+EV TN Sbjct: 179 FMMDLHANKHGYTEMLAPYIANKESMTGTGQLPKFADDMFKLEGLDYYLVPTAEVPTTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ LP ++ FR+EAGSAGRDTRG++RQHQF K EL+ + E S+ E Sbjct: 239 HRDEILDGNKLPEYYSCYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVKPETSWHEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + M+ AE++L+ L+L Y VV LCTGD+ F++ TYDLEVW QN YREISSCS C ++ Sbjct: 299 DTMVDAAEDVLRLLELPYHVVKLCTGDMSFTSATTYDLEVWFPAQNKYREISSCSNCTDY 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSG+AVGR + AILENY DGSV IP VL PYM Sbjct: 359 QARRANIKFRRDAKSKPEFVHTLNGSGLAVGRTVAAILENYQQEDGSVRIPKVLVPYMGG 418 Query: 420 LAVIKK 425 + VIKK Sbjct: 419 VEVIKK 424 >gi|269102238|ref|ZP_06154935.1| seryl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268162136|gb|EEZ40632.1| seryl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 436 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 191/434 (44%), Positives = 262/434 (60%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E + L+E+ + L K E+++A+RN+ S IGQ Sbjct: 1 MLDSKLLRTELDDTAEKLARRGFKLDVENLRQLEEQRKSLQVKTEELQAQRNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + E L +L +K + + L + +PN+P E VP+G N Sbjct: 61 AKAKGDHEEAERILAEVGNLGSELDEAKKALAALQAELDAITQTVPNIPDESVPVGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ + ++H ++GE +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKTYDFEVKDHVDLGEMSDGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 FM+DLH EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHIEEHGYTEMYVPYLVNADSLFGTGQLPKFGADLFHTQPLTEKVNDEEPRTLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I E LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLMRDTISEEADLPVKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGSCKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIRI 420 Query: 410 PTVLRPYMNNLAVI 423 P VLR YMN I Sbjct: 421 PEVLRKYMNGAEYI 434 >gi|260773037|ref|ZP_05881953.1| seryl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] gi|260612176|gb|EEX37379.1| seryl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] Length = 435 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 191/434 (44%), Positives = 270/434 (62%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFTLDVDTIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +++G+ + +A+K + TL E L + E ++ + L+ + +PN+P VP G + Sbjct: 61 LMSQGDKAGAEAIKQQIGTLGEDLDSKKVELDKIQAELEAITQTVPNIPDSSVPDGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G ++H ++GE G +DF ATK++GARF ++ G A L RA+ Q Sbjct: 121 DNVEVSRWGTPKEYDFEVKDHVDLGEMSGGLDFASATKITGARFVIMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE+ P LV E ++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEQHGYTELYVPYLVNQETLFGTGQLPKFGKDLFHTEPLTEKASDEDPRRFSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDVILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + + AE++L+ L+L YR V LCTGD+GF ACKTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMAALEELTAHAEKVLQLLNLPYRKVVLCTGDMGFGACKTYDLEVWVPAQKTYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILENY ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKAEKRPELVHTLNGSGLAVGRTMVAILENYQQADGRIEI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM L I Sbjct: 421 PAVLQKYMGGLTHI 434 >gi|300853245|ref|YP_003778229.1| seryl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] gi|300433360|gb|ADK13127.1| seryl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] Length = 426 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 180/428 (42%), Positives = 269/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR NPE + L R + + +++LDEK R ++ ++E ++ +RN +SAQ Sbjct: 1 MLDLKRIRNNPEEVKKQLSNRGEDFDPATIDEVIALDEKRRKILVEVEALKNKRNQDSAQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G D L E + + + + E E+ ++ ++ IPN+P VP G Sbjct: 61 IAKMKRNG--ENADDLVAEMKHVSDNIKQYDTELSELNGKIEYIMLRIPNIPNPAVPEGK 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ IR + + H++IG L ++DF+R K+SG+RF+ G A LERA Sbjct: 119 SDEDNVEIRKWSEPTKFDFKPKAHWDIGTDLDILDFERGGKVSGSRFTFYKGLGAKLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT +HGYTE+ P +V +M GTGQ+PKF +D F ++ + IPT+EV + Sbjct: 179 IITYYLDFHTEKHGYTEILPPYMVNRTSMTGTGQLPKFEEDAFRISNNDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN + E+++ ++LPL++ + FR+EAGSAGRDTRG++RQHQF K E+V T+ E+S+ Sbjct: 239 TNFHRDEVLKGENLPLKYVAYSACFRAEAGSAGRDTRGIIRQHQFNKVEMVKFTKPEESY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE++LK L + YRVV +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 DELEKLTNDAEDVLKGLKIPYRVVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +Y++ ++ HTLNGSGVA+GR + AILENY DGSV IP +LRPY Sbjct: 359 EDFQARRANIKYKETPKDKPRYVHTLNGSGVAIGRTVAAILENYQQEDGSVIIPEILRPY 418 Query: 417 MNNLAVIK 424 M VIK Sbjct: 419 MGGKEVIK 426 >gi|253688109|ref|YP_003017299.1| seryl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511677|sp|C6DF54|SYS_PECCP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|251754687|gb|ACT12763.1| seryl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 431 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 198/432 (45%), Positives = 265/432 (61%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIAL-KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R + + L +R + E + +E+ ++L + E+++A RNS S +IG Sbjct: 1 MLDPNLLRNELDAVAEKLLARRGFKLDVETLRKQEERRKVLQVETENLQAERNSRSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G ++ L+ E +TL E+L + E ++ + ++ L IPN+P + VP+G Sbjct: 61 AAKARG--EDIEPLRREVNTLGEKLDAAKAELDQLQNEIRDLALTIPNLPDDSVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N + G+ R+H E+GE +DF A KL+GARF V+ G +A L RAL Sbjct: 119 TQNQEVTRWGEPRKYDFPVRDHVELGEMAAGLDFAAAVKLTGARFVVMKGQIARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPT 231 QFM+DLHT +H Y E P LV +YGTGQ+PKF +D+F T LIPT Sbjct: 179 QFMLDLHTQQHAYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTNPLSEEAESSQYALIPT 238 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV LTNL EI++ +SLPL+ T P FRSEAGS GRDTRG++R HQF K ELV I R Sbjct: 239 AEVPLTNLVRDEILDEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVR 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS E + + AE +L+ L L YR V LCTGD+GF + KTYDLEVWL Q+ YREIS Sbjct: 299 PEDSMQALEELTTHAETVLQLLKLPYRKVLLCTGDMGFGSTKTYDLEVWLPAQDTYREIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A+LENY ADG + IP Sbjct: 359 SCSNMWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEIPE 418 Query: 412 VLRPYMNNLAVI 423 VLRPYM L I Sbjct: 419 VLRPYMGGLEFI 430 >gi|224368220|ref|YP_002602383.1| SerS [Desulfobacterium autotrophicum HRM2] gi|259511665|sp|C0QLD3|SYS_DESAH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|223690936|gb|ACN14219.1| SerS [Desulfobacterium autotrophicum HRM2] Length = 427 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 205/427 (48%), Positives = 284/427 (66%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+++R+N E + AL KR + E ++K R L+++IE++R +RN+ S +I + Sbjct: 1 MLEIKYVRENIEEVKQALAKRAGKADFEGFARAEKKRRELLQQIEELRHQRNTVSDEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L E T+ +++ L+K E +++ + IPN+P +VP+G S Sbjct: 61 MKRNKEDAGTSIL--EMRTVSDEIKTLDKTLAEQDDFIQQFMMAIPNMPHPDVPMGASDA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N L + VG S + H++IGE LG++DF RA K++GARFS+ G A LERAL Sbjct: 119 DNTLEKKVGTPRSFDFPIKAHWDIGEDLGILDFPRAAKITGARFSLYLGSGAKLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+DLHT+EHGYTE P +V E++ GTGQ+PKF +D+F +LIPTSEV +TN+ Sbjct: 179 FMLDLHTNEHGYTETLPPFIVNRESLLGTGQLPKFEEDLFKIEGQEYYLIPTSEVPMTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y E++ ++LP++FT P FRSEAGS G+DTRG++RQHQF K ELV T E S+ E Sbjct: 239 YRDEVLNEENLPIKFTAYTPCFRSEAGSYGKDTRGLIRQHQFNKVELVKYTTPETSYQEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E +L+ AE +LKRL L Y+VV+LC+GDLGFSA +TYD+EVW+ GQ+ YREISSCS C F Sbjct: 299 ESLLANAETVLKRLGLPYQVVTLCSGDLGFSATRTYDIEVWMPGQDKYREISSCSNCEAF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R K L+F HTLNGSG+AVGR + AILEN+ DGSV IP VLRPYM Sbjct: 359 QARRANIKFRRAGQKKLEFVHTLNGSGLAVGRTVAAILENFQQPDGSVVIPEVLRPYMGG 418 Query: 420 LAVIKKE 426 I E Sbjct: 419 KETITNE 425 >gi|83943025|ref|ZP_00955485.1| seryl-tRNA synthetase [Sulfitobacter sp. EE-36] gi|83846033|gb|EAP83910.1| seryl-tRNA synthetase [Sulfitobacter sp. EE-36] Length = 430 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 207/429 (48%), Positives = 281/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP+ D AL +R P S +L+LDE R I E +A +N S +G Sbjct: 1 MHDIKAIRENPDAFDAALARRGDTPVSAQVLALDEARRAKISAAETAQAEQNKASKLVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ S K ++ ++ E ++ + L +++ IPN+P ++ P G Sbjct: 61 AKAKGDEAEFERLRTLVSDKKAEVTAMQAEAKDLDAQLTDMLARIPNLPADDAPDGADEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G P+ ++EHFEI MDF+ A K SGARF +L G +A + RAL Q Sbjct: 121 DNVEVNRWGDVPTFDFKAKEHFEIASVAASMDFETAAKTSGARFVMLKGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID H E+G TE P+LVRDEAMYGT ++PKF DD + TT+G WLIPTSEV+LT Sbjct: 181 FMIDTHVDENGLTEHMTPVLVRDEAMYGTDKLPKFGDDSYQTTNGWWLIPTSEVTLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +++E +LP R T FRSEAGSAGRDT GMLRQHQF K E+VS+T + S E + Sbjct: 241 AGDVLEEAALPRRMTAHTLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSVTHPDQSDDEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE++L+RL + YR V LCTGD+GF A +T+D+E WL GQN YREISS ST G+FQ Sbjct: 301 RMLRCAEDMLERLGVPYRTVILCTGDMGFGARRTFDIEAWLPGQNAYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + +F HTLNGSG+AVGRCLIA+LEN ADGSV +P VL PY+ Sbjct: 361 ARRMNARFKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVKLPDVLAPYLGGK 420 Query: 421 AVIKKEHIL 429 + + L Sbjct: 421 ITLGVDGTL 429 >gi|237809053|ref|YP_002893493.1| seryl-tRNA synthetase [Tolumonas auensis DSM 9187] gi|259516216|sp|C4L937|SYS_TOLAT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|237501314|gb|ACQ93907.1| seryl-tRNA synthetase [Tolumonas auensis DSM 9187] Length = 432 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 199/434 (45%), Positives = 277/434 (63%), Gaps = 14/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R + E L R + I +L+E+ ++L + ++++A RN+ S IG+ Sbjct: 1 MLDPKFLRSDIETAAERLALRGYKLDVATINALEEQRKVLQTRTQELQAERNARSKAIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G V L + +L +L +K++ E+ L+++ +PN+P + VP+G + Sbjct: 61 AKRLGQ--DVAPLMAQVGSLGSELEQCKKQQDEILEQLRQIALLVPNLPADTVPVGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H +GE G +DF ATK+SG+RF VL G +A + RAL Q Sbjct: 119 ENVEVRRWGTPRQFDFEIKDHVAVGEDNGGLDFATATKISGSRFVVLKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE P LV +++ GTGQ+PKFA+D+F T LI Sbjct: 179 FMLDLHTQQHGYTECYVPYLVNADSLLGTGQLPKFAEDLFHTAINGEGDEEGKVRKFSLI 238 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN+ EI + K+LP++ T +P FRSEAGS GRDTRG++R HQF K E+V + Sbjct: 239 PTAEVPLTNIARDEIYDEKALPVKMTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQL 298 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E S+ E M+ AE++L+ L L YRVVSLCTGD+GFSA KTYDLEVWL QN YRE Sbjct: 299 VHPEKSWDALEEMVGHAEKVLQLLGLPYRVVSLCTGDMGFSAAKTYDLEVWLPAQNTYRE 358 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS C +FQ+RRM +R R +SK + HTLNGSG+AVGR L+A+LENY ADG + + Sbjct: 359 ISSCSNCTDFQARRMQARVRGADSK-PQLLHTLNGSGLAVGRTLVAVLENYQQADGRIEV 417 Query: 410 PTVLRPYMNNLAVI 423 P VLRPYM+ L I Sbjct: 418 PEVLRPYMSGLTHI 431 >gi|241759885|ref|ZP_04757985.1| serine--tRNA ligase [Neisseria flavescens SK114] gi|241319893|gb|EER56289.1| serine--tRNA ligase [Neisseria flavescens SK114] Length = 431 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 271/431 (62%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLAARGYEFDTARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKVDLEQAAADLDAVQKELDAWLLTIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMKGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLKHGYTEHYTPYIVDDLTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + I+ LPL+ T +P FRSEAG+ G+D RG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIVAGSDLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ +P L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINVPAAL 418 Query: 414 RPYMNNLAVIK 424 +PYM + ++ Sbjct: 419 QPYMGGVTKLE 429 >gi|206561375|ref|YP_002232140.1| seryl-tRNA synthetase [Burkholderia cenocepacia J2315] gi|238693102|sp|B4EBR4|SYS_BURCJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|198037417|emb|CAR53352.1| seryl-tRNA synthetase [Burkholderia cenocepacia J2315] Length = 433 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 200/430 (46%), Positives = 271/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTHTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E S + + + E + E+ + L L+ +PNV E VP+G Sbjct: 61 MKGKG--EDTSAVMAEVSGIGDDMKASEAKLGEIQARLSDLMLGMPNVAHESVPVGKDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 119 DNVEVRRWGTPRQFDFEVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQQHGYTETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + E Sbjct: 238 ISLTNTVRESIVDGAALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 TSYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P VL Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGMERI 426 >gi|163784436|ref|ZP_02179316.1| hypothetical protein HG1285_05375 [Hydrogenivirga sp. 128-5-R1-1] gi|159880295|gb|EDP73919.1| hypothetical protein HG1285_05375 [Hydrogenivirga sp. 128-5-R1-1] Length = 419 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 208/420 (49%), Positives = 282/420 (67%), Gaps = 4/420 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IR+NP+ + LK R L + IL++D++ R LI ++E ++A +N S +I Sbjct: 1 MLDIKLIRENPDFVKERLKTRDEVLVFVIDEILTVDKERRKLIAEVEQLKAEKNKLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ EG K E E++ LEKE EV L+ +PN+P E VP+G Sbjct: 61 GKLFKEGKKEEAQKAKEEVVAKNERIECLEKELKEVEKRFNNLLLTVPNLPYESVPVGKD 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN+ IR G+ H+EIGE LG++DF+R KLSG+RF+V+ A LERAL Sbjct: 121 ETENVEIRKWGEPRKFDFEPLPHWEIGEKLGILDFERGAKLSGSRFTVMFKEAARLERAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLT 237 FM+D+HT EHGYTEV +P+LV+ E + GTGQ+PKF +D++ D +L+PT+EVSLT Sbjct: 181 INFMLDIHTKEHGYTEVWSPVLVKPEILTGTGQLPKFEEDLYKICDEDLYLLPTAEVSLT 240 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL++ EI++ + LP +T P FR EAGS GRD RG+LRQHQF K ELV I + E+S+ Sbjct: 241 NLHAGEILKEEELPKYYTAYTPCFRREAGSHGRDVRGILRQHQFDKVELVKIVKPEESYN 300 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E++++ AE+IL+ L+L YRVV LCTGDLGFSA KTYD+EVW+ QN+YREISSCS Sbjct: 301 ELEKLVNEAEKILQLLELPYRVVELCTGDLGFSAAKTYDIEVWIPSQNMYREISSCSNTE 360 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RY+ K+ +F HTLNGSG+AVGR L+A++ENY DGS IP VL+ YM Sbjct: 361 DFQARRAKIRYKTKEGKN-EFVHTLNGSGLAVGRTLLAVMENYQKPDGSFDIPEVLQKYM 419 >gi|170698494|ref|ZP_02889565.1| seryl-tRNA synthetase [Burkholderia ambifaria IOP40-10] gi|170136578|gb|EDT04835.1| seryl-tRNA synthetase [Burkholderia ambifaria IOP40-10] Length = 433 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 195/430 (45%), Positives = 271/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + +++ E + E+ + L L+ +PN+ E VP+G Sbjct: 61 MKGKG--EDTSAVMAEVGGIGDEMKASEAKLGEIQTRLSDLMLGMPNIAHESVPVGKDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 119 DNVEVRRWGTPREFDFEVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGSIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGY+E P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTLQHGYSETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGGENTITQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + + Sbjct: 238 ISLTNTVRESIVDGSALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGMERI 426 >gi|78065554|ref|YP_368323.1| seryl-tRNA synthetase [Burkholderia sp. 383] gi|123569084|sp|Q39IN7|SYS_BURS3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|77966299|gb|ABB07679.1| seryl-tRNA synthetase [Burkholderia sp. 383] Length = 433 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 198/430 (46%), Positives = 271/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAQRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + +++ E + E+ + L L+ +PNV E VP+G Sbjct: 61 MKGKG--EDTSAVMAEVGGIGDEMKAGEAKLGEIQARLSDLMLGMPNVAHESVPVGKDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 119 DNVEARRWGTPRQFDFEVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGSIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTLQHGYTETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGEENKVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + E Sbjct: 238 ISLTNTVRESIVDASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGIERI 426 >gi|293396837|ref|ZP_06641111.1| serine-tRNA ligase [Serratia odorifera DSM 4582] gi|291420308|gb|EFE93563.1| serine-tRNA ligase [Serratia odorifera DSM 4582] Length = 430 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 264/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + + + S +E+ ++L E ++A RNS S IG Sbjct: 1 MLDPNLLRNELDAVAEKLARRGFKLDLDLLRSQEERRKVLQVATETLQAERNSRSKSIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ S ++ +PN+P + VP G + Sbjct: 61 AKARG--EDIEPLRREVNDLGEKLDAAKAELDKLQSEIRDYALALPNLPDDSVPNGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN + G+ R+H E+GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 ENQEVSRWGEPRQYDFSVRDHVELGEMAGGLDFASAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTKPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL QN YREISS Sbjct: 299 EDSMDALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSSKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R+ K + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRNKTEKKPRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPDV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLEYI 429 >gi|149908479|ref|ZP_01897142.1| seryl-tRNA synthetase [Moritella sp. PE36] gi|149808642|gb|EDM68577.1| seryl-tRNA synthetase [Moritella sp. PE36] Length = 428 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 190/427 (44%), Positives = 263/427 (61%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R + E L R E + I SL+E+ + L + E ++ RN S IG+ Sbjct: 1 MLDPKFLRADLEEAKQRLASRGFELDVDTIKSLEEQRKALQIRTEQLQNDRNVRSKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G V +L E L E+L + + E E+ + ++ + +PN+P VP G + Sbjct: 61 AKASG--EDVQSLLAEVGKLGEELDVAKAELAELLTKIEDIALSLPNLPHSSVPQGQDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G+ ++H ++GEAL +DF A K+SG+RF V+ G +A + RA+ Q Sbjct: 119 DNVELKRWGQPKEFDFEIKDHVDVGEALNGLDFKTAVKISGSRFIVMRGQVARMHRAIAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+D HT EHGYTE+ P LV +++YGT Q+PKF +D+F T LIP++EV Sbjct: 179 FMLDTHTEEHGYTELYVPYLVNADSLYGTAQLPKFGEDLFHTKPATEEGQGLSLIPSAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TN I + LP+R T P FRSEAGS GRDTRG++RQHQF K E+V + E Sbjct: 239 PVTNTARDTITDEADLPVRLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQLAHPEK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S+ E M AE IL +L+L YRVV+LCTGD+GFSA KTYDLEVW+ Q YREISS S Sbjct: 299 SYEALEEMCQHAENILIKLNLPYRVVTLCTGDMGFSAAKTYDLEVWVPAQKTYREISSIS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 C +FQ+RR+++R R ++K HTLNGSG+AVGR L+AILENY DG V +P VLR Sbjct: 359 NCEDFQARRLHARTRLKDNKKPVLLHTLNGSGLAVGRTLVAILENYQLEDGRVEVPEVLR 418 Query: 415 PYMNNLA 421 YM L Sbjct: 419 GYMGGLT 425 >gi|302390825|ref|YP_003826645.1| seryl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302202902|gb|ADL11580.1| seryl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 426 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 181/427 (42%), Positives = 265/427 (62%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + L++R + + DEK R ++ ++E ++ RRN S +IG+ Sbjct: 1 MLDLRFVRENTGLIKKVLEQRGTDANIDEFKEYDEKRRDVLYEVEQLKHRRNEASEKIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G L E + +++ L++ E + +++ IPN+P E+VP+G Sbjct: 61 LKRKG--EDASELIEEMREVSDKISELDEIVAECEEKINEILLTIPNIPHEDVPVGDDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI+ + + H++IGE L ++DF+R K+SG+RF+ L A LERAL Sbjct: 119 DNIVAWKWEEPTEFDFEPQPHWDIGEELDILDFERGAKVSGSRFTFLKNLGARLERALIA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FMID+HT EHGY EV P +VR E+M GTGQ+PKF +D F +LIPT+EV +TN+ Sbjct: 179 FMIDIHTEEHGYNEVFPPFIVRGESMVGTGQLPKFEEDAFKIEGTNHYLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI++ LP+ + FR+EAG+ GRDTRG++RQHQF K ELV S+ E Sbjct: 239 YRDEIMDKDELPIYHVAYSGCFRAEAGAHGRDTRGIIRQHQFNKVELVKFVEPGTSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+++ AE++L+RL+L YRV+++CTGDLGF+A K YDLEVW + YRE+SSCS +F Sbjct: 299 EKLVKNAEKVLQRLELPYRVMNMCTGDLGFTAAKKYDLEVWFPSYDTYREVSSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR RYR +F HTLNGSG+A+GR + AILENY DGSV IP L+PYM Sbjct: 359 QARRAGIRYRPEPDAKAEFVHTLNGSGLAIGRTVAAILENYQQEDGSVIIPEALQPYMKG 418 Query: 420 LAVIKKE 426 + I + Sbjct: 419 IEKITPK 425 >gi|116689002|ref|YP_834625.1| seryl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|162218059|ref|YP_620385.2| seryl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|166200606|sp|A0K5F5|SYS_BURCH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116647091|gb|ABK07732.1| seryl-tRNA synthetase [Burkholderia cenocepacia HI2424] Length = 433 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 199/430 (46%), Positives = 270/430 (62%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTHTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + + E + E+ + L L+ +PNV E VP+G Sbjct: 61 MKGKG--EDTSAVMAEVGGIGDDMKASEAKLGEIQARLSDLMLGMPNVAHESVPVGKDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 119 DNVEARRWGTPRQFDFEVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQQHGYTETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + E Sbjct: 238 ISLTNTVRESIVDASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 TSYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P VL Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGMERI 426 >gi|105892247|gb|ABF75412.1| seryl-tRNA synthetase [Burkholderia cenocepacia AU 1054] Length = 471 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 199/430 (46%), Positives = 270/430 (62%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 39 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTHTEELQARRNSLSKQIGA 98 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + + E + E+ + L L+ +PNV E VP+G Sbjct: 99 MKGKG--EDTSAVMAEVGGIGDDMKASEAKLGEIQARLSDLMLGMPNVAHESVPVGKDEA 156 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 157 DNVEARRWGTPRQFDFEVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGPIARLHRALAQ 215 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 216 FMIDTHTQQHGYTETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGAENTVTQYLISTSE 275 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + E Sbjct: 276 ISLTNTVRESIVDASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPE 335 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 336 TSYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 395 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P VL Sbjct: 396 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVL 454 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 455 RPYMGGMERI 464 >gi|240141053|ref|YP_002965533.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Methylobacterium extorquens AM1] gi|240011030|gb|ACS42256.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Methylobacterium extorquens AM1] Length = 428 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 234/428 (54%), Positives = 298/428 (69%), Gaps = 1/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NPE D L++R L P S +++LD+ + + + + RRN+ S +IG Sbjct: 1 MHDIRAIRENPEAFDRDLERRGLAPLSAELIALDDARKGAVSAAQAAQERRNALSKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E + LKE+ P LE + E +L + ++ IPN P ++VP G + Sbjct: 61 AKKAKDEARATELMAEVARLKEEAPGLEAAQGEAAKALDERLAAIPNRPKDDVPPGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ R + R+HFE+GEA GLMDF+ A KLSG+RF VL G LA LERALGQ Sbjct: 121 GNVEYRRFDSSRERLTQGRQHFELGEATGLMDFEAAAKLSGSRFVVLKGQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGYTEV P+LVR+EAM+GT Q+PKF DD F + WLIPT+EV LTNL Sbjct: 181 FMLDLHTGEHGYTEVVPPVLVREEAMFGTAQLPKFRDDQFAAGENFWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I+ LPLRFT L P FR+EAG+AGRDTRGMLRQHQF K ELVSIT E S EHE Sbjct: 241 RESILAEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFNKVELVSITAPEKSAEEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML+CAE +L++LDL YRV++LCTGD+GF++ KTYD+EVW+ GQ YREISSCS CG FQ Sbjct: 301 RMLACAEAVLQKLDLTYRVMTLCTGDMGFASQKTYDIEVWVPGQQTYREISSCSVCGEFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + + F HTLNGSGVAVGR LIA++ENY N DGSVTIP+ L+PYM L Sbjct: 361 ARRMNARYRAKEGRGVGFVHTLNGSGVAVGRALIAVMENYQNPDGSVTIPSALQPYMGGL 420 Query: 421 AVIK-KEH 427 I+ ++ Sbjct: 421 TRIEGPKN 428 >gi|23097467|ref|NP_690933.1| seryl-tRNA synthetase [Oceanobacillus iheyensis HTE831] gi|30173160|sp|Q8EU77|SYS_OCEIH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|22775690|dbj|BAC11968.1| seryl-tRNA synthetase [Oceanobacillus iheyensis HTE831] Length = 424 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 181/425 (42%), Positives = 265/425 (62%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++++RQN E + L+ R + + LD R LI + E ++A+RN + +I Sbjct: 1 MLDMKYLRQNFEEVQQRLQHRGEDLADLDKFGELDTNRRQLIAETEKLKAQRNEATKKIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+K+ ++ L++++ IPN+P E VP+G Sbjct: 61 ELKREKK--DAEPAIKEMREVGQEIATLDKQLKDIEEKLEQIMLSIPNLPHESVPVGEDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +NI R G+ P+ + H+++ L ++DF+RA K++G+RF G A LERAL Sbjct: 119 EDNIEARKWGEAPNFAFEALPHWDVATNLDIIDFERAGKVTGSRFVFYKGLGARLERALW 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+DLH EHGY E+ P +V +M GTGQ+PKF +D F +++PT+EV +TN Sbjct: 179 NFMMDLHADEHGYQEMLPPYIVNRSSMTGTGQLPKFEEDAFKLEEWDYFMVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ LP ++ + SFRSEAGSAGRDTRG++RQHQF K ELV+ + EDS+ Sbjct: 239 YHREEILGIDDLPKKYVAFSASFRSEAGSAGRDTRGLIRQHQFNKVELVNFVKPEDSYDV 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ER+ AE++L+ L L YRV+S+CTGDLGF+A K YD+EVW+ Q YREISSCS + Sbjct: 299 LERLTGEAEKVLQLLKLPYRVMSMCTGDLGFTAAKKYDIEVWIPSQETYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R+R + +F HTLNGSG+A+GR + AILENY DG+V +P VLRPYM Sbjct: 359 FQARRAGIRFRREANGKPEFVHTLNGSGLAIGRTVAAILENYQQEDGTVVVPEVLRPYMG 418 Query: 419 NLAVI 423 +I Sbjct: 419 GKEII 423 >gi|325528345|gb|EGD05497.1| seryl-tRNA synthetase [Burkholderia sp. TJI49] Length = 433 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 195/430 (45%), Positives = 270/430 (62%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + +++ + E+ L L+ +PN+ E VP+G Sbjct: 61 MKGKG--EDTSAVMAEVGGIGDEMKASATQLDEIQQRLSDLMLGMPNIAHESVPVGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 119 DNVEVRRWGTPRQFDFDVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMLDTHTQQHGYSETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E+ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + E Sbjct: 238 ISLTNTVRDSIVEASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 TSYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGMERI 426 >gi|154483909|ref|ZP_02026357.1| hypothetical protein EUBVEN_01615 [Eubacterium ventriosum ATCC 27560] gi|149735400|gb|EDM51286.1| hypothetical protein EUBVEN_01615 [Eubacterium ventriosum ATCC 27560] Length = 427 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 184/429 (42%), Positives = 258/429 (60%), Gaps = 5/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +R N E ++ AL R+ E LDEK R L+ ++E ++A +N+ S I Q Sbjct: 1 MLDIKLLRNNFEEVEKALSTRNEEFDLSLFKDLDEKRRNLLGEVEALKAEQNATSKLIPQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V + E + E++ L E + L + +PN+P VP G + Sbjct: 61 YKKEGK--DVAPIMAEMKEISEKVKTLNGELSKAEEDLNNYMLTLPNIPNPTVPQGMTDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ + H+++G LG++D + A K+SG+RF+V A LERA+ Sbjct: 119 DNVEIRKFGEPTKFDFEPKAHWDLGADLGILDPETAAKISGSRFTVYRDLGAKLERAIVN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLT 237 F +D HT++HGYTEV P +V E+M GTGQ+PKF +D + +L+PT+EV +T Sbjct: 179 FFLDTHTTKHGYTEVFPPFMVSRESMTGTGQLPKFEEDAYKVQGDGKEYFLVPTAEVPVT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y ++I++ LP+ FR+EAGSAGRDTRG++RQHQF K ELV + E S+ Sbjct: 239 NMYRNQILDGSKLPIMHCAYTACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPETSYD 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E++ AE++L+ L L YRVV +C GDLGF+A YD+EVW+ Y EISSCS Sbjct: 299 ELEKLTRDAEDVLQMLGLPYRVVKICIGDLGFTAAMKYDIEVWMPSYGRYVEISSCSNFE 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR N +Y+D +F HTLNGSGVA GR AILENY ADGS+ IP VLRPYM Sbjct: 359 TFQARRANIKYKDNAGDKAEFVHTLNGSGVAAGRTTAAILENYQQADGSIVIPEVLRPYM 418 Query: 418 NNLAVIKKE 426 L I+ + Sbjct: 419 GGLEKIEAK 427 >gi|163853631|ref|YP_001641674.1| seryl-tRNA synthetase [Methylobacterium extorquens PA1] gi|238687369|sp|A9VY49|SYS_METEP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|163665236|gb|ABY32603.1| seryl-tRNA synthetase [Methylobacterium extorquens PA1] Length = 428 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 234/428 (54%), Positives = 298/428 (69%), Gaps = 1/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NPE D L++R L P S +++LD+ + + + + RRN+ S +IG Sbjct: 1 MHDIRAIRENPEAFDRDLERRGLAPLSAELIALDDARKGAVSAAQAAQERRNALSKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E + LKE+ P LE + E +L + ++ IPN P ++VP G + Sbjct: 61 AKKAKDEARATELMAEVARLKEEAPGLEAAQGEAAKALDERLAAIPNRPKDDVPPGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ R + R+HFE+GEA GLMDF+ A KLSG+RF VL G LA LERALGQ Sbjct: 121 GNVEYRRFDSSRERLAQGRQHFELGEATGLMDFEAAAKLSGSRFVVLKGQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGYTEV P+LVR+EAM+GT Q+PKF DD F + WLIPT+EV LTNL Sbjct: 181 FMLDLHTGEHGYTEVVPPVLVREEAMFGTAQLPKFRDDQFAAGENFWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I+ LPLRFT L P FR+EAG+AGRDTRGMLRQHQF K ELVSIT E S EHE Sbjct: 241 RESILAEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFNKVELVSITAPEKSAEEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML+CAE +L++LDL YRV++LCTGD+GF++ KTYD+EVW+ GQ YREISSCS CG FQ Sbjct: 301 RMLACAEAVLQKLDLTYRVMTLCTGDMGFASQKTYDIEVWVPGQQTYREISSCSVCGEFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + + F HTLNGSGVAVGR LIA++ENY N DGSVTIP+ L+PYM L Sbjct: 361 ARRMNARYRAKEGRGVGFVHTLNGSGVAVGRALIAVMENYQNPDGSVTIPSALQPYMGGL 420 Query: 421 AVIK-KEH 427 I+ ++ Sbjct: 421 TRIEGPKN 428 >gi|126732587|ref|ZP_01748384.1| seryl-tRNA synthetase [Sagittula stellata E-37] gi|126706871|gb|EBA05940.1| seryl-tRNA synthetase [Sagittula stellata E-37] Length = 430 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 207/429 (48%), Positives = 279/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NPE LD AL +R EP S +L+LD + R I E +A +N S ++G+ Sbjct: 1 MHDIRAIRENPETLDAALGRRGAEPMSSAVLALDAERRAAILAAETAQADQNRASKEVGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ + K ++ ++++ + + L L+ +PN+PL +VP G N Sbjct: 61 AKASGDEAEFERLRALVAEKKAEVAEMQEKAKVLDTQLTDLLMGLPNLPLADVPDGADEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ S +EH+E+ MDF+ A KLSG+RF +L+G +A + RAL Q Sbjct: 121 DNVEIRRWGEPRSFDFTPKEHYELEGVKPGMDFETAAKLSGSRFVLLSGGVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H EH E P+LVR E MYGTGQ+PKF +D + TT+G WLIPTSEV+LTN+ Sbjct: 181 FMLDTHVEEHDLAETWTPVLVRPEMMYGTGQLPKFGEDSYETTNGWWLIPTSEVTLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + ++ LP R+ + FRSEAGSAGRDT GMLRQHQF K E+V++ + S EHE Sbjct: 241 NGLTVDEGYLPRRYAAHSQCFRSEAGSAGRDTSGMLRQHQFEKVEMVTVCHPDKSLEEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE IL++L L YR V LCTGD+GF A KT+D+EVWL GQN YREISS STCG+FQ Sbjct: 301 RMTRCAEAILEKLGLPYRTVVLCTGDIGFGAQKTHDIEVWLPGQNTYREISSVSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RY+ F HTLNGSG+AVGR LIA+LEN ADGSV +P L P++ Sbjct: 361 ARRMNARYKPTEGGKPGFLHTLNGSGLAVGRALIAVLENGQQADGSVDLPEALHPWLRGK 420 Query: 421 AVIKKEHIL 429 + L Sbjct: 421 TRLDASGNL 429 >gi|229083329|ref|ZP_04215689.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228699976|gb|EEL52601.1| Seryl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 424 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 186/426 (43%), Positives = 264/426 (61%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD + R L+ + E+++++RN S QI Sbjct: 1 MLDIKFLRANFEEVKAKLQHRGEDLTDFGRFEELDIRRRELLVQTEELKSKRNEVSQQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E +AL E + E++ + E V L++L+ IPN+P E PIG + Sbjct: 61 VLKREKK--DAEALILEMREVGEKVKKFDDELRSVEEDLERLMLSIPNIPHESAPIGDTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N++ R+ G+ + H+++ LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVVTRTWGEIKEFNFEPKPHWDLATDLGILDFERAAKVTGSRFVFSKGAGAKLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EH Y EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 SFMLDLHTEEHEYEEVLPPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ LP+R+ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILNVDQLPIRYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTNDAERVLQLLGLPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HT+NGSG+A+GR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIRFRREPNAKPEHVHTINGSGLAIGRTIAAILENYQQEDGTIIIPEVLRPYMG 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GKTVIK 424 >gi|157375268|ref|YP_001473868.1| seryl-tRNA synthetase [Shewanella sediminis HAW-EB3] gi|189083588|sp|A8FV67|SYS_SHESH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157317642|gb|ABV36740.1| Serine--tRNA ligase [Shewanella sediminis HAW-EB3] Length = 428 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 197/429 (45%), Positives = 269/429 (62%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E L R E + L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRTELEATAERLATRGFILDVERLSKLEEKRKSLQMATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V + + L QL ++E E+ +L + +PN+P E VP G + Sbjct: 61 AKAKG--EDVAPIMAQVGDLGSQLDTKKQELAELLETLNAIAMSVPNLPDESVPAGADES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H E+GE LG +DF A K++G RF ++ G +A + RAL Q Sbjct: 119 ENVEVRRWGTPKEFNFEVKDHVELGETLGGLDFKAAVKITGTRFIIMKGQIARMNRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV +E++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEESLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTN+ II+ LP++ T P FRSEAGS GRDTRG++RQHQF K ELV + + ED Sbjct: 239 PLTNIARDTIIDEADLPVKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S + + AE +L++L+L YR V LCTGD+GF + KT+D+EVWL QN YREISSCS Sbjct: 299 SMAALDSLTGHAETVLQKLELPYRTVVLCTGDMGFGSSKTFDIEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RY+ ++K HTLNGSG+AVGR L+A++ENY N DGS+T+P VLR Sbjct: 359 NMQDFQARRMQARYKAKSAKKPALLHTLNGSGLAVGRTLVAVIENYQNEDGSITVPEVLR 418 Query: 415 PYMNNLAVI 423 PYM L I Sbjct: 419 PYMGGLEKI 427 >gi|295402717|ref|ZP_06812659.1| seryl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|312109164|ref|YP_003987480.1| seryl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|294975248|gb|EFG50884.1| seryl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|311214265|gb|ADP72869.1| seryl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 424 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 189/426 (44%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++++R + + + ++KR + + LD+K R LI K E+++ +RN S QI Sbjct: 1 MLDVKYLRNHFQEVKERIQKRGGDLANMDRFAELDKKRRELIAKAEELKNKRNEVSQQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E + L E + +++ ++ E +V L L+ IPN+P E VP+G S Sbjct: 61 VLKREKK--DANHLIAEMREVGDRIKAMDDEIRQVEEELNALLLSIPNIPHESVPVGKSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ S + H++I + LG++DF+RA K++G+RF G A LERAL Sbjct: 119 EDNVEVRKWGEPRSFSFEPKPHWDIADQLGILDFERAAKVTGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D+H E GY E+ P LV +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMLDVHIEEFGYQEILPPYLVNRASMTGTGQLPKFEEDAFRIETEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ ++ LP+ + + FR+EAG+AGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 LHRDEILSAEDLPIYYAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFVKPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE IL+ L L YRVV LCTGDLGF+A KTYD+EVWL YREISSCS Sbjct: 299 LEKLTNQAERILQLLGLPYRVVCLCTGDLGFAAAKTYDIEVWLPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY DG+V IP VLRPYM Sbjct: 359 FQARRANIRFRREPKSKPEYVHTLNGSGLAIGRTVAAILENYQQEDGTVVIPEVLRPYMG 418 Query: 419 NLAVIK 424 N VI+ Sbjct: 419 NREVIR 424 >gi|310767171|gb|ADP12121.1| seryl-tRNA synthetase [Erwinia sp. Ejp617] Length = 430 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 267/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + + +E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGYKLDVDTLRAHEERRKVLQVETENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + +S+ IPN+P + VP+G + Sbjct: 61 AKACG--EDIEPLRQEMNALGERLDAAKAELDALLTSINDFSMAIPNIPADVVPLGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN I G R+H E+GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 ENQEIGRWGVPRKFDFTVRDHVELGERAAGLDFAAAVKLTGSRFIVMKGQIALMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV ++ GTGQ+PKF +D+F T LIPTS Sbjct: 179 FMLDLHTEQHGYQETYVPYLVNHASLNGTGQLPKFGEDLFHTRPLDEEASSSNYALIPTS 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLPL+ T P FRSEAG+ GRDTRG++R HQF K E+V +TR Sbjct: 239 EVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFDKVEMVHVTRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E ++ AE++L+ L+L YR V LCTGD+GF A KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R R + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMGDFQARRMKARCRPKGETKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMKGLTFI 429 >gi|330840034|ref|YP_004414614.1| Seryl-tRNA synthetase [Selenomonas sputigena ATCC 35185] gi|329747798|gb|AEC01155.1| Seryl-tRNA synthetase [Selenomonas sputigena ATCC 35185] Length = 425 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 189/426 (44%), Positives = 277/426 (65%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R + + + L+KR + L+EK R L+++ E+++ARRNS S +IG Sbjct: 1 MLDIKFVRDHIDEVQAMLEKRCNPLKLSGFKELEEKRRTLLQEAEELKARRNSVSKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G V A+ E + +++ L+ EV L ++ IPN+P ++VPIG Sbjct: 61 KKKQG--EDVAAISAEMREVGKKIADLDARTREVEDELHTILLNIPNMPKDDVPIGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G+ + + H+++G L ++D +RA K++GARF+ G A LERA Sbjct: 119 ENPEVRRWGEPRTFTFEPKAHWDLGADLEILDAERAAKVTGARFTFYKGLGARLERACIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLH ++HGYTE+ AP + + +M GTGQ+PKFA+DMF +L+PT+EV TN Sbjct: 179 FMMDLHATKHGYTEMLAPYIANEASMIGTGQLPKFAEDMFKLEGLDYYLVPTAEVPTTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ + LP R+T+ FR+EAGSAGRDTRG++RQHQF K EL+ T+ E+S+ E Sbjct: 239 HRDEILDGRKLPERYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFTKPEESWDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M+ AE++L+ L++ Y VV LCTGD+ F++ KTYD+EVW+ QN YREISSCS C ++ Sbjct: 299 EGMVDAAEDVLRILEIPYHVVLLCTGDMSFTSAKTYDIEVWMPAQNTYREISSCSNCLDY 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSG+AVGR + AILENY DGSV +P L PYM Sbjct: 359 QARRANIKFRREPKAKPEFCHTLNGSGLAVGRTVAAILENYQQEDGSVRVPKALVPYMGG 418 Query: 420 LAVIKK 425 + VI+K Sbjct: 419 VEVIEK 424 >gi|304391793|ref|ZP_07373735.1| seryl-tRNA synthetase [Ahrensia sp. R2A130] gi|303296022|gb|EFL90380.1| seryl-tRNA synthetase [Ahrensia sp. R2A130] Length = 426 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 231/426 (54%), Positives = 300/426 (70%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR NPE D + +R L PQS+ +L+LDE R I K+++ + RN+ S +IG Sbjct: 1 MFDIKWIRDNPEAFDQGMARRGLGPQSDRLLALDEARRDHISKVQEAQEARNAASKKIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + A +E + LK L EE + ++L + +S + NVP ++VP G Sbjct: 61 AKAQGDEAGAQAAISEVAKLKSFLQTGADEERTLSAALSEALSTLDNVPADDVPDGADEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ G++P+ +EH+E+GEALG MDFD A KLSG+RF VL LA LERALGQ Sbjct: 121 DNVETHRHGEQPAFAFKPKEHWELGEALGQMDFDAAAKLSGSRFVVLNRGLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH EH Y EV+ P+LVR E ++G G +PKF DD+F T+D R+LIPTSE LTNL Sbjct: 181 FMVDLHVDEHAYHEVAPPVLVRSEVLFGVGNLPKFEDDLFKTSDDRYLIPTSEAPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I++ K+LP R+T L FR+EAGSAGRDTRGMLRQHQF KCE+VSIT ++S E + Sbjct: 241 RESILDEKTLPRRYTALTNCFRAEAGSAGRDTRGMLRQHQFAKCEMVSITTPDNSDAEQQ 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM+ CAEE+LKRL LHYRVV LCTGDLGFSA +T D+EVWL GQ+ +REISSCSTCG+FQ Sbjct: 301 RMVGCAEEVLKRLGLHYRVVKLCTGDLGFSARRTLDIEVWLPGQDTFREISSCSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM++RYR K HTLNGSG+AVGR LIA++ENY N DGS+ +P VL+ YM Sbjct: 361 ARRMDARYRPEGEKQPVHVHTLNGSGIAVGRALIAVMENYQNEDGSIRVPDVLQSYMGGT 420 Query: 421 AVIKKE 426 VI+ Sbjct: 421 TVIEAT 426 >gi|315633929|ref|ZP_07889218.1| serine--tRNA ligase [Aggregatibacter segnis ATCC 33393] gi|315477179|gb|EFU67922.1| serine--tRNA ligase [Aggregatibacter segnis ATCC 33393] Length = 438 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 202/437 (46%), Positives = 269/437 (61%), Gaps = 14/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR I L+E+ + L K E ++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKIKRGFTLDVANITQLEEQRKALQVKTETLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + +L + E +V ++L + IPN+P++EVP+G Sbjct: 61 AAKARG--EDIAPLLAEVDHMAAELEQGKVELEKVQNALNDIALNIPNIPVDEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G+ ++H +GE L +DF A KL+G+RF V+ G +A L RAL Sbjct: 119 SENLEVSRWGEPRKFDFEVKDHVALGENLQGLDFASAVKLTGSRFVVMKGQIAKLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWL 228 QFM+DLHT +HGYTE P LV + +YGTGQ+PKF++D+F T L Sbjct: 179 QFMLDLHTEQHGYTEAYVPYLVNHDTLYGTGQLPKFSEDLFHTKPLEGQDPNEVQRTYAL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL +I+E+++LPL+ T P FRSEAGS GRDTRG++R HQF K ELV Sbjct: 239 IPTAEVPVTNLVRGDILEAENLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF +CKTYDLEVW+ QN YR Sbjct: 299 IVEPERSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMQARCRSKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIKK 425 +P VLRPYM L VI K Sbjct: 419 VPEVLRPYMGGLEVIGK 435 >gi|85859585|ref|YP_461787.1| seryl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|85722676|gb|ABC77619.1| seryl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 448 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 194/424 (45%), Positives = 279/424 (65%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++RQN + + +++R +S+D + R +++++E +R RN+ S IG+ Sbjct: 24 MLDIKFLRQNVDLVKKKIEERGQGIDLSAFVSMDAERRDILQEVESLRNERNAVSRHIGE 83 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 L + T+ ++ LE+ E +L L+ IPN+P E V G +A Sbjct: 84 RKK--RKEDAQDLIDRMGTVSGRIRELEEGLKETEENLHNLLLTIPNIPHESVVCGVNAE 141 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N ++R G+KP + H+EIGE L ++DF R K++GARF++ G A LERA+ Sbjct: 142 DNPVVRVWGEKPLFDFSPKPHWEIGEDLSILDFARGAKITGARFTLYRGAGAMLERAIIN 201 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNL 239 FM+DLH EHGYTE+ P + ++M GTGQ+PKFA+D+F + +LIPT+EV +TN+ Sbjct: 202 FMLDLHIMEHGYTEILPPFMANRDSMTGTGQLPKFAEDLFKIENLEYYLIPTAEVPVTNI 261 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+E K+LP+ + +P FR+EAGS G+DTRG++RQHQF K E+V T E S+ E Sbjct: 262 HREEILEEKALPIYYVAYSPCFRAEAGSYGKDTRGLIRQHQFNKVEMVKFTSPETSYDEL 321 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEE+LKRL++ YR VSLCTGDLGFS+ KTYD+E WL GQ+ YREISSCS +F Sbjct: 322 EKLTVNAEEVLKRLNIPYRTVSLCTGDLGFSSAKTYDVEAWLPGQDTYREISSCSNFEDF 381 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R+R ++ L F HTLNGSG+A GR L+A+LENY ADGS+ IP VLRPYM Sbjct: 382 QARRASIRFRRESTGKLDFVHTLNGSGLAAGRTLVAVLENYQQADGSIVIPDVLRPYMKG 441 Query: 420 LAVI 423 + I Sbjct: 442 MKKI 445 >gi|255066517|ref|ZP_05318372.1| serine--tRNA ligase [Neisseria sicca ATCC 29256] gi|255049101|gb|EET44565.1| serine--tRNA ligase [Neisseria sicca ATCC 29256] Length = 431 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 197/433 (45%), Positives = 273/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + L +R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQQLRSHTAAVAERLAQRGYEFDTARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP+G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPVGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMKGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + I+ LPL+ T +P FRSEAG+ G+D RG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSILAEGDLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM + ++ Sbjct: 419 QPYMGGVTKLEAR 431 >gi|77459804|ref|YP_349311.1| seryl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] gi|123604068|sp|Q3KA84|SYS_PSEPF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|77383807|gb|ABA75320.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Pseudomonas fluorescens Pf0-1] Length = 426 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 273/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R N + + L R I +L+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEALQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L ++ IPN+P E VP+G + Sbjct: 61 AKQRG--EDIAPLMADVERMAGELSAGKVELEAIQTELDSILLGIPNLPHESVPVGEDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTAFDFPVQDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F +LIPT+EVSL Sbjct: 179 FMINLHVTEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIAREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ + EI++SK LP++F P FRSEAG++GRDTRGM+RQHQF K E+V I S Sbjct: 239 TNIVAGEIVDSKQLPIKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE++L+ L L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALESLTANAEKVLQLLGLPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPDVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|330503300|ref|YP_004380169.1| seryl-tRNA synthetase [Pseudomonas mendocina NK-01] gi|328917586|gb|AEB58417.1| seryl-tRNA synthetase [Pseudomonas mendocina NK-01] Length = 426 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 197/426 (46%), Positives = 269/426 (63%), Gaps = 6/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L R +L+ + + + + E ++A RNS S IGQ Sbjct: 1 MLDSKLVRTQLSEIAERLATRGFALDVARFEALESQRKSVQVRTEQLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E + L ++E + + L L+ IPN+P E VP+G + Sbjct: 61 AKARG--EDIAPLLAEVDQMGSDLEAGKRELDAIQNELDNLLLNIPNLPHESVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ + G + ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVARWGAPRTFDFEIKDHVALGEQHGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LHT EHGY E P LV+ A+ GTGQ+PKF +D+F +LIPT+EVSL Sbjct: 179 FMINLHTGEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIRREDQADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ + EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I SF Sbjct: 239 TNIVAGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSF 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E M + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGMTANAERVLQLLELPYRKLALCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +RYR+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAV 422 M + V Sbjct: 419 MGGIEV 424 >gi|254486623|ref|ZP_05099828.1| seryl-tRNA synthetase [Roseobacter sp. GAI101] gi|214043492|gb|EEB84130.1| seryl-tRNA synthetase [Roseobacter sp. GAI101] Length = 430 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 209/429 (48%), Positives = 285/429 (66%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP+ D AL +R P + IL+LD R +I E +A +N S +G Sbjct: 1 MHDIKAIRENPDAFDAALARRGDAPVTGEILALDTARRGMINAAETAQAEQNKASKLVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ S K ++ ++ E ++ + L +++ IPN+P ++VP G N Sbjct: 61 AKAKGDEAEFERLRTLVSDKKAEVTRMQAEAKDLDAQLTDMLARIPNLPADDVPEGADEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G PS ++EHFEI MDF+ A K SGARF +L G +A + RAL Q Sbjct: 121 DNVEVNRWGDVPSYDFAAKEHFEIASVAASMDFETAAKTSGARFVMLKGAVARVHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H +G TE + P+LVRDEAMYGT ++PKF DD + TT+G WLIPTSEV+LT Sbjct: 181 FMVDTHVDHNGLTEYATPVLVRDEAMYGTDKLPKFGDDSYQTTNGWWLIPTSEVTLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S +++E +LP R T FRSEAGSAGRDT GMLRQHQF K E+VSIT + S E + Sbjct: 241 SGDVLEEAALPRRMTAHTLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSITHPDASDDEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE++L+RL + YR V LCTGD+GF A +T+D+E WL GQN YREISS ST G+FQ Sbjct: 301 RMLRCAEDLLERLGVPYRTVLLCTGDMGFGARRTFDIEAWLPGQNAYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + +F HTLNGSG+AVGRCLIA+LEN ADGSV +P VL PY+ Sbjct: 361 ARRMNARFKPADGSKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVQLPDVLAPYLGGK 420 Query: 421 AVIKKEHIL 429 ++ + +L Sbjct: 421 TLLGADGVL 429 >gi|126174377|ref|YP_001050526.1| seryl-tRNA synthetase [Shewanella baltica OS155] gi|166223285|sp|A3D4J4|SYS_SHEB5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|125997582|gb|ABN61657.1| seryl-tRNA synthetase [Shewanella baltica OS155] Length = 428 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 201/429 (46%), Positives = 263/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E L R ++ L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELEVTAERLATRGFILDIAHLTQLEEKRKSLQVATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G VDA+ + L QL + E V + + +PN+P E PIG Sbjct: 61 AKARG--EDVDAIMAQVGDLGSQLDAKKIELAAVLEEVNAIAMSMPNLPDESAPIGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + ++H ++GE L +DF A K++G+RF V+ G +A L RA+GQ Sbjct: 119 ENVEVRRWGTPRTFDFPIKDHIDLGEGLNGLDFKNAVKITGSRFIVMKGQVARLNRAIGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV + ++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I++ LP++ T FRSEAGS G+DTRG++RQHQF K E+V I + ED Sbjct: 239 PLTNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE +L+RL L YR V LCTGD+GF + KTYD+EVWL QN YREISSCS Sbjct: 299 SMAALEALTGHAETVLQRLGLPYRTVILCTGDMGFGSSKTYDIEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR HTLNGSG+AVGR L+AILENY NADGS+TIP VLR Sbjct: 359 NMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSITIPEVLR 418 Query: 415 PYMNNLAVI 423 PYM L I Sbjct: 419 PYMGGLTKI 427 >gi|307265411|ref|ZP_07546967.1| seryl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919525|gb|EFN49743.1| seryl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 423 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 199/426 (46%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR NPE + A++ + + + L LDEK R ++ ++E ++ RRN S I + Sbjct: 1 MLDVKRIRNNPEAVRRAVELKGEKADIDRFLELDEKRRQMLVELETLKNRRNMESDNIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG L E L +++ +E+E EV L++++ IPN+P E VPIG S Sbjct: 61 LKREGK--DASDLIAEMKELSDKIKEMEQEVKEVEEELERILWTIPNIPHESVPIGDSDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ + H+EIGE LG++DF+ A +++G+RF+ G A LERAL Sbjct: 119 DNVEIRRWGEPRKFDFEPKPHWEIGEELGILDFEAAARVTGSRFTFYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH HGYTEV P + +M+GTGQ+PKF +D F + IPT+EV +TN+ Sbjct: 179 FMLDLHIERHGYTEVFPPFMAHRRSMFGTGQLPKFEEDAFKVYGTDYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y II+ LP+ + FR EAGSAGRDTRG++RQHQF K ELV T + S+ E Sbjct: 239 YRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M AEE+L+ L L YRVV++CTGDLGF+A K YD+EVW+ Y EISSCS C +F Sbjct: 299 EKMTRDAEEVLQALGLPYRVVAICTGDLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR + ++ HTLNGSGVAVGR AILENY DGSV IP VLRPYM Sbjct: 359 QARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYMK- 417 Query: 420 LAVIKK 425 + VIKK Sbjct: 418 VDVIKK 423 >gi|188534278|ref|YP_001908075.1| seryl-tRNA synthetase [Erwinia tasmaniensis Et1/99] gi|238689714|sp|B2VC55|SYS_ERWT9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|188029320|emb|CAO97197.1| Seryl-tRNA synthetase [Erwinia tasmaniensis Et1/99] Length = 430 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 268/431 (62%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + + +E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGYKLDVDTLRAHEERRKVLQVETENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + + IPN+P + VP+G + Sbjct: 61 AKARG--EDIEPLRQEVNALGERLDAAKAELDALLTCINDFSMAIPNIPADVVPLGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN I G+ R+H E+GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 ENQEISRWGEPRQFDFTVRDHVELGEMAAGLDFAAAVKLTGSRFIVMKGQIALMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV ++YGTGQ+PKF +D+F T LIPTS Sbjct: 179 FMLDLHTEQHGYQETYVPYLVNHASLYGTGQLPKFGEDLFHTRPLDEEASSSNYALIPTS 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E ++LPL+ T P FRSEAG+ GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPLTNLVRDEILEEETLPLKMTAHTPCFRSEAGAYGRDTRGLIRMHQFDKVEMVHITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E ++ AE++L+ L+L YR V LCTGD+GF A KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGAQKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R R + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMGDFQARRMKARCRPRGESKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMKGLHFI 429 >gi|28897882|ref|NP_797487.1| seryl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|260364482|ref|ZP_05777107.1| serine--tRNA ligase [Vibrio parahaemolyticus K5030] gi|260877041|ref|ZP_05889396.1| serine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|260902447|ref|ZP_05910842.1| serine--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|31340446|sp|Q87QP1|SYS_VIBPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|28806095|dbj|BAC59371.1| seryl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|308093830|gb|EFO43525.1| serine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308110643|gb|EFO48183.1| serine--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|308114618|gb|EFO52158.1| serine--tRNA ligase [Vibrio parahaemolyticus K5030] Length = 435 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 192/434 (44%), Positives = 265/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E +V + L + +PN+P +EVP G N Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELEQVMAQLDEFTLSVPNIPADEVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ + ++H ++GE G +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKTYDFDLKDHVDLGEMGGGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I + LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTITDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS T E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMTALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM I Sbjct: 421 PAVLQKYMGGATHI 434 >gi|313667939|ref|YP_004048223.1| seryl-tRNA synthetase [Neisseria lactamica ST-640] gi|313005401|emb|CBN86835.1| seryl-tRNA synthetase [Neisseria lactamica 020-06] Length = 431 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 275/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQSLRSNTAAVAERLAARGYEFDAARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L +S IPN+P E VP G Sbjct: 61 LKGQGRHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLSGIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRRVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT EHGYTE P +V +YGTGQ+PKF +D+F T ++LIPT+E Sbjct: 180 FMLDTHTLEHGYTEHYTPYIVNGGTLYGTGQLPKFGEDLFHVTRGGDESKTAQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAG+ G+D RG++RQHQF K E+V I E Sbjct: 240 VTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYGALEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEAK 431 >gi|260776356|ref|ZP_05885251.1| seryl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260607579|gb|EEX33844.1| seryl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 435 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 190/434 (43%), Positives = 268/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E E+ + L+ + +PN+P +EVP G N Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLEAKKAELVEIQNKLEDITLSVPNLPDDEVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ I G+ S ++H ++GE +DF ATK++GARF ++ G A L RA+ Q Sbjct: 121 ENVEISRWGEPKSYDFEVKDHVDLGEMGDGLDFASATKITGARFIIMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF +D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGEDLFHTEPLTEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I++ LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMVRDTIVDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ E+S E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEESMAALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNTWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM I Sbjct: 421 PAVLQKYMGGATHI 434 >gi|293392027|ref|ZP_06636361.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952561|gb|EFE02680.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 438 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 203/437 (46%), Positives = 273/437 (62%), Gaps = 14/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R NP + LK KR + I L+E+ + L K E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNPADVAEKLKIKRGFVLDTAKITQLEEQRKALQVKTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + E+L + E +V ++L + IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEVDHMAEELEQGKIELDKVQNALNDIALNIPNIPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G+ ++H +GE L +DF A KL+G+RF V+ G +A L RA+ Sbjct: 119 SENLEVSRWGEPRKFDFEVKDHVTLGENLQGLDFAAAVKLTGSRFVVMKGQIAKLHRAIA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWL 228 QFM+DLHT +HGYTE P LV + +YGTGQ+PKF++D+F T L Sbjct: 179 QFMLDLHTEQHGYTEAYVPYLVNHDTLYGTGQLPKFSEDLFHTKPLEGQDPNEVQRTYGL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EI+++++LPL+ T P FRSEAGS GRDTRG++R HQF K ELV Sbjct: 239 IPTAEVPVTNLVRGEILDAENLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF +CKTYDLEVW++ QN YR Sbjct: 299 IVEPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSCKTYDLEVWVSAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMQARCRSKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIKK 425 +P VLRPYM L VI K Sbjct: 419 VPEVLRPYMGGLDVIGK 435 >gi|290967982|ref|ZP_06559531.1| serine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] gi|290781888|gb|EFD94467.1| serine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] Length = 424 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 194/420 (46%), Positives = 271/420 (64%), Gaps = 5/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R+N E + +K R+ + ++LD K R LI+++E ++ RN+ + +I + Sbjct: 1 MLDAKFVRENLEAVRENIKNRNAHVDLDAFIALDSKRRTLIQQVETMKNERNTVTQEISR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N AL L + + + +KE H+V +L+++ IPN+ VP+G + Sbjct: 61 LKR--NKEDASALIEAMKKLGDTIAVQDKEIHQVAEALRQIQLMIPNMCHPSVPVGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G+ + +EH+EIGE LG++D +RA K++GARF G A LERA+ Sbjct: 119 QNPEVRKWGEPTNFSFTPKEHWEIGENLGILDAERAAKVAGARFYYYIGAGARLERAVYN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC---TTDGRWLIPTSEVSLT 237 FM+D HT + GYTEV P +V +AM GTGQ+PKF++DM+ +LIPT+EV LT Sbjct: 179 FMLDRHTEKDGYTEVIPPYIVNRKAMTGTGQLPKFSEDMYQLQVEGQDMFLIPTAEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N YS EI+ + LP+ T L P FR+EAGSAGRDTRG++RQHQF K E+V T E S+ Sbjct: 239 NYYSGEILRADQLPVYVTALTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKYTTPESSYD 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E +++ AE+ILK L+L Y VV LCTGD+GFSA KT+D+EVW Q YREISSCS Sbjct: 299 ELDKLTRNAEDILKALELPYHVVCLCTGDIGFSAAKTFDVEVWFPAQGKYREISSCSNTE 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N R+R ++ HTLNGSG+AVGR + AILENY ADGSV +P VLRPYM Sbjct: 359 DFQARRANIRFRRDTKAKPEYVHTLNGSGLAVGRTVAAILENYQQADGSVAVPEVLRPYM 418 >gi|149204172|ref|ZP_01881140.1| seryl-tRNA synthetase [Roseovarius sp. TM1035] gi|149142614|gb|EDM30659.1| seryl-tRNA synthetase [Roseovarius sp. TM1035] Length = 430 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 207/429 (48%), Positives = 279/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+ P+ D AL +R L P S IL+LDE R I E +A +N S + G Sbjct: 1 MHDIRAIRETPDAFDAALARRGLAPVSPQILALDEARRTRIHAAESAQADQNRASKEAGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ + + L+ S KE++ ++ E + + L L+ +PN+P ++VP GT + Sbjct: 61 AKGRGDEAEFERLRTLVSAKKEEMAAMQAEAKALDTQLTDLLMALPNLPFDDVPDGTDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G S +EH++I MDF+ A KLSGARF VL+G +A L RAL Q Sbjct: 121 GNVELRRWGTPASFDFTPKEHYDITGVQPGMDFETAAKLSGARFVVLSGSIARLHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G E P+LVR E M GTGQ+PKF +D + TT+G WL+PT+EV+LTN+ Sbjct: 181 FMLDTHIEENGLQETWTPVLVRPEMMLGTGQLPKFGEDSYETTNGWWLVPTAEVTLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 E +++ +LP R+ FRSEAGSAGRDT GMLRQHQF K E+VSIT ++S E + Sbjct: 241 HGETVDAATLPRRYVAHTQCFRSEAGSAGRDTAGMLRQHQFEKVEMVSITHPDESRAELD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CA+ IL+RL L YR + LCTGD+GF A +T+D+EVWL GQN YREISS S CG+FQ Sbjct: 301 RMTACAQSILERLGLPYRTIVLCTGDMGFGARRTHDIEVWLPGQNTYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ +F HTLNGSG+AVGRCLIA+LEN ADGSV IP L PY+ Sbjct: 361 ARRMNARFKPQGGGKPEFLHTLNGSGLAVGRCLIAVLENGQQADGSVRIPDALHPYLRGK 420 Query: 421 AVIKKEHIL 429 ++ + L Sbjct: 421 TILNADGSL 429 >gi|325266501|ref|ZP_08133178.1| serine--tRNA ligase [Kingella denitrificans ATCC 33394] gi|324981944|gb|EGC17579.1| serine--tRNA ligase [Kingella denitrificans ATCC 33394] Length = 467 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 285/433 (65%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + L +R +E L+ + + L + E+++A+RNS S QIG Sbjct: 36 MLDIQLLRNDIQTTAQRLAQRGFVLDTERFGELEGRRKQLQIRSEELQAQRNSLSKQIGV 95 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +G +A K + + LK + +E E +V ++L L+ IPN+P E VP+G Sbjct: 96 LMGQGKKDEAEAAKAQVAQLKTDMENIESELPQVQAALDDLLLRIPNLPHESVPVGKDET 155 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG + ++H ++G ALG +DF++A +LSGARFS++ G +A L RAL Q Sbjct: 156 ENVEVRKVGTPRTFDLDIKDHVDLGAALG-LDFEKAAELSGARFSLMKGKIARLHRALAQ 214 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKF +D+F T ++LIPT+E Sbjct: 215 FMLDTHTQQHGYTECYTPYIVNDSTLLGTGQLPKFGEDLFHVTRGGDETKLTQYLIPTAE 274 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN I+ K LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I + E Sbjct: 275 VTLTNTVRDTILAEKDLPLKLTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVEMVQIVQPE 334 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 335 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 394 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N ++ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 395 SNCEDFQARRMKARFKDENGRN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 453 Query: 414 RPYMNNLAVIKKE 426 RPY+ L ++ + Sbjct: 454 RPYLGGLERLEAD 466 >gi|254246060|ref|ZP_04939381.1| Seryl-tRNA synthetase, class IIa [Burkholderia cenocepacia PC184] gi|124870836|gb|EAY62552.1| Seryl-tRNA synthetase, class IIa [Burkholderia cenocepacia PC184] Length = 487 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 199/430 (46%), Positives = 269/430 (62%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 55 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTHTEELQARRNSLSKQIGA 114 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + + E + E+ + L L+ +PNV E VP+G Sbjct: 115 MKGKG--EDTSAVMAEVGGIGDDMKASEAKLGEIQARLSDLMLGMPNVAHESVPVGKDEA 172 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 173 DNVEARRWGTPRQFDFEVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGPIARLHRALAQ 231 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 232 FMIDTHTQQHGYTETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGAENTVTQYLISTSE 291 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + E Sbjct: 292 ISLTNTVRESIVDGAALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPE 351 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 352 TSYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 411 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P VL Sbjct: 412 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVL 470 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 471 RPYMGGMERI 480 >gi|170732292|ref|YP_001764239.1| seryl-tRNA synthetase [Burkholderia cenocepacia MC0-3] gi|238688596|sp|B1JX98|SYS_BURCC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|169815534|gb|ACA90117.1| seryl-tRNA synthetase [Burkholderia cenocepacia MC0-3] Length = 433 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 199/430 (46%), Positives = 269/430 (62%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTHTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + + E + E+ + L L+ +PNV E VP+G Sbjct: 61 MKGKG--EDTSAVMAEVGGIGDDMKASEAKLGEIQARLSDLMLGMPNVAHESVPVGKDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 119 DNVEARRWGTPRQFDFEVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQQHGYTETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + E Sbjct: 238 ISLTNTVRESIVDGAALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 TSYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P VL Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGMERI 426 >gi|163759446|ref|ZP_02166531.1| seryl-tRNA synthetase [Hoeflea phototrophica DFL-43] gi|162283043|gb|EDQ33329.1| seryl-tRNA synthetase [Hoeflea phototrophica DFL-43] Length = 427 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 251/426 (58%), Positives = 317/426 (74%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NP LD AL+KR E QS +++LDE R + ++ ++ RRN+ S +IG+ Sbjct: 1 MLDIKWIRENPAALDAALEKRGAEAQSSRLVALDEARRSHVGLVQALQERRNAASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A + + DALK E + LK++L E +E E+ LK +S +PN+PL+EVP+G Sbjct: 61 AMAAKDQAAADALKAEVAKLKDELQAGEAKERELDEELKHALSVLPNIPLDEVPLGADEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG+KP +EHFE+GEALG+MDF+RA K+SGARF++L+G LA LERALGQ Sbjct: 121 DNVEVRKVGEKPDLGFEPKEHFELGEALGMMDFERAAKMSGARFTILSGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGYTEV+ PLLV D A YGT ++PKF DD+F TTDGRWLIPT+EV LT + Sbjct: 181 FMLDLHTGEHGYTEVNPPLLVNDAAAYGTDKLPKFGDDLFRTTDGRWLIPTAEVPLTYMA 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI+ LP R+ FRSEAGSAGRDTRGMLRQHQF K ELVS+T E S EHE Sbjct: 241 AGEILAEDELPKRYAAHTACFRSEAGSAGRDTRGMLRQHQFSKVELVSVTTPETSLEEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM + AE +L RL LH+R V LCTGD+GF A KTYD+EVWL GQN YREISSCS CG+FQ Sbjct: 301 RMTASAEAVLTRLGLHFRTVVLCTGDMGFGAQKTYDIEVWLPGQNAYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R R P K+ +F HTLNGSGVAVGR LIA++ENY NADGS+T+P LR YM L Sbjct: 361 ARRMNARSRKPGDKATRFVHTLNGSGVAVGRALIAVMENYQNADGSITVPDALRFYMGGL 420 Query: 421 AVIKKE 426 + I+K Sbjct: 421 SKIEKT 426 >gi|110679777|ref|YP_682784.1| seryl-tRNA synthetase [Roseobacter denitrificans OCh 114] gi|123065549|sp|Q166J5|SYS_ROSDO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|109455893|gb|ABG32098.1| seryl-tRNA synthetase [Roseobacter denitrificans OCh 114] Length = 430 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 210/429 (48%), Positives = 285/429 (66%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R P S+ IL+LD R I E+ +A +N S ++GQ Sbjct: 1 MHDIRAIRENPAAFDAALARRGEAPMSQAILALDTARRAKINAAENAQAEQNKASKEVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ S K + ++ + + + L + +S I N+P ++VP G + Sbjct: 61 AKAQGDEATFEKLRALVSEKKALVAEMQADAKALDAELTEKLSWIANIPADDVPDGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G P +EH+EIG MDFD A K SGARF +L G +A + RAL Q Sbjct: 121 DNVEVRRWGHLPDFEFTPKEHYEIGGVAASMDFDTAAKTSGARFVMLKGAVARIHRALSQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID H +G TE+++P+LVRD+AMYGT ++PKFA+D + TT+G WL+ TSE+ LT Sbjct: 181 FMIDTHVDHNGLTEINSPVLVRDDAMYGTDKLPKFAEDSYQTTNGWWLVSTSEIPLTYTV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I+++ +LP+R T FRSEAGSAGRDT GMLRQHQF K E+VSIT + S E + Sbjct: 241 AGDILDAAALPIRLTAHTLCFRSEAGSAGRDTAGMLRQHQFEKVEMVSITEPDQSEAEQQ 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE+IL+RL L YR V LCTGD+GF A +T+D+E WL GQN YREISS ST G+FQ Sbjct: 301 RMLRCAEDILERLGLPYRTVLLCTGDMGFGARRTFDIEAWLPGQNNYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RY+ + +F HTLNGSG+AVGRCLIA+LEN ADGSV +P VL Y+ Sbjct: 361 ARRMNARYKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVVLPPVLAGYLGGK 420 Query: 421 AVIKKEHIL 429 V+ E L Sbjct: 421 TVLSAEGTL 429 >gi|161525589|ref|YP_001580601.1| seryl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189349682|ref|YP_001945310.1| seryl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|221201182|ref|ZP_03574222.1| seryl-tRNA synthetase [Burkholderia multivorans CGD2M] gi|221206364|ref|ZP_03579377.1| seryl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221213643|ref|ZP_03586617.1| seryl-tRNA synthetase [Burkholderia multivorans CGD1] gi|30913321|sp|Q9AEN2|SYS_BURCE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238687044|sp|A9AES3|SYS_BURM1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|13591535|emb|CAC36357.1| putative seryl-tRNA synthetase [Burkholderia cepacia] gi|160343018|gb|ABX16104.1| seryl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189333704|dbj|BAG42774.1| seryl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|221166432|gb|EED98904.1| seryl-tRNA synthetase [Burkholderia multivorans CGD1] gi|221173673|gb|EEE06107.1| seryl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221179032|gb|EEE11439.1| seryl-tRNA synthetase [Burkholderia multivorans CGD2M] Length = 433 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 200/430 (46%), Positives = 274/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRN+ S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNTLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G A+ E + +++ + E+ + L +L+ +PN+ E VP+G Sbjct: 61 MKAKG--EDTSAVMAEVGGIGDEMKASAAKLDEIQARLSELLLGMPNLAHESVPVGKDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H +IG LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 119 DNVEVRRWGTPRQFDFDVKDHVDIGTPLG-LDFETGAKLAGARFTMLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMLDTHTQQHGYSETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E+ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRESIVEASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRVV+LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 SSYAALDEMVGHAEAILQKLGLPYRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P VL Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVL 416 Query: 414 RPYMNNLAVI 423 RPYM L I Sbjct: 417 RPYMGGLERI 426 >gi|328473158|gb|EGF44006.1| seryl-tRNA synthetase [Vibrio parahaemolyticus 10329] Length = 435 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 191/434 (44%), Positives = 264/434 (60%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E +V + L + +PN+P +EVP G N Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELEQVMAQLDEFTLSVPNIPADEVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ + ++H ++GE G +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKTYDFDLKDHVDLGEMGGGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I + LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTITDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM I Sbjct: 421 PAVLQKYMGGATHI 434 >gi|115350893|ref|YP_772732.1| seryl-tRNA synthetase [Burkholderia ambifaria AMMD] gi|122323794|sp|Q0BHH5|SYS_BURCM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|115280881|gb|ABI86398.1| seryl-tRNA synthetase [Burkholderia ambifaria AMMD] Length = 433 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 198/430 (46%), Positives = 271/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + +++ E + E+ + L L+ +PN+ E VP+G Sbjct: 61 MKGKG--EDTSAVMAEVGGIGDEMKASEAKLGEIQTRLSDLMLGMPNIAHESVPVGKDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 119 DNVEVRRWGTPREFDFAVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGSIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTLQHGYTETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGGENTITQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + + Sbjct: 238 ISLTNTVRESIVEGSALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRVV+LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLGLPYRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGMERI 426 >gi|224826934|ref|ZP_03700033.1| seryl-tRNA synthetase [Lutiella nitroferrum 2002] gi|224600921|gb|EEG07105.1| seryl-tRNA synthetase [Lutiella nitroferrum 2002] Length = 428 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 207/430 (48%), Positives = 282/430 (65%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R PE + L R + ++ L+ + + L ++++++ARRN+ S QIG+ Sbjct: 1 MLDIQLLRSQPETVAERLAARGYQLDTDAFGQLENERKALQTRMQELQARRNATSKQIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +G V A+ E +TL ++L E V L+ + IPN+P VP G + Sbjct: 61 AKRKG--EDVSAIMAEVATLGDELKAAEAAFEAVQQKLEHWLMTIPNLPHASVPQGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R VG S +++H ++G LG +DF+ KLSGARF+VL G +A L RAL Q Sbjct: 119 ANVEVRRVGVPRSFEFEAKDHVDVGSPLG-LDFETGAKLSGARFTVLRGEIAQLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM++ HT++HGYTE+ P +V D ++GTGQ+PKFA+DMF T ++LI TSE Sbjct: 178 FMLNTHTNQHGYTEMYTPYIVNDSVLFGTGQLPKFAEDMFKVTRGGEEGAVDQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++LTN I++ LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + E Sbjct: 238 ITLTNTVRESILKLDELPVKMTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVWL QN YREISSC Sbjct: 298 KSYDALEEMVGHAEAILKALELPYRVITLCTGDMGFGAAKTYDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LENY NADGSVT+PTVL Sbjct: 358 SNCEAFQARRMQARFKDENGKN-QLVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPTVL 416 Query: 414 RPYMNNLAVI 423 RPY+ I Sbjct: 417 RPYLGGKEKI 426 >gi|254230182|ref|ZP_04923576.1| seryl-tRNA synthetase [Vibrio sp. Ex25] gi|262394647|ref|YP_003286501.1| seryl-tRNA synthetase [Vibrio sp. Ex25] gi|151937320|gb|EDN56184.1| seryl-tRNA synthetase [Vibrio sp. Ex25] gi|262338241|gb|ACY52036.1| seryl-tRNA synthetase [Vibrio sp. Ex25] Length = 435 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 191/434 (44%), Positives = 264/434 (60%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E +V + L + +PN+P +EVP G N Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELEQVMAQLDEFTLSVPNIPADEVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ + ++H ++GE G +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKTYDFDLKDHVDLGEMGGGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I + LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTISDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM I Sbjct: 421 PAVLQKYMGGATHI 434 >gi|172059906|ref|YP_001807558.1| seryl-tRNA synthetase [Burkholderia ambifaria MC40-6] gi|238689188|sp|B1YUL5|SYS_BURA4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|171992423|gb|ACB63342.1| seryl-tRNA synthetase [Burkholderia ambifaria MC40-6] Length = 433 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 195/430 (45%), Positives = 270/430 (62%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + E + +++ E + E+ + L L+ +PN+ E VP+G Sbjct: 61 MKGKG--EDTSDVMAEVGGIGDEMKASEAKLGEIQTRLSDLMLGMPNIAHESVPVGKDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 119 DNVEVRRWGTPREFDFAVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGSIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGY+E P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTLQHGYSETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGGENTITQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + + Sbjct: 238 ISLTNTVRDSIVEGSALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGMERI 426 >gi|37525551|ref|NP_928895.1| seryl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|46577174|sp|Q7N6E7|SYS_PHOLL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|36784979|emb|CAE13897.1| seryl-tRNA synthetase (serine--tRNA ligase) (SERRS) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 429 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 193/430 (44%), Positives = 263/430 (61%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + L +R + + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNILRNELGAVAEKLARRGYTLDVDTLRKQEERRKVLQVETETLQAERNSRSKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G +D L+ E + L E+L + E ++ + ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIDPLRQEVNQLGEKLDTAKAELEKLQAEIRDLALSIPNIPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ ++H +GE +DF A KL+G+RF V+ G +A L RAL Q Sbjct: 119 DNLEVSRWGEPGKYDFEIQDHVSLGELTNGLDFAAAVKLTGSRFVVMKGQIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM++LHT +HGY E P LV E +YGTGQ+PKF +D+F T LIPT+E Sbjct: 179 FMLNLHTEQHGYLETYVPYLVNHETLYGTGQLPKFGEDLFHTKPLEEEAESHYALIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL +I++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I + Sbjct: 239 VPITNLVRGDILDENELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVHPD 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S E + AE++L+ L+L YR V LCTGD+GFSACKTYDLEVWL QN YREISSC Sbjct: 299 ESMDALEALTGHAEKVLQLLNLPYRKVLLCTGDMGFSACKTYDLEVWLPAQNTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R K + HTLNGSG+AVGR L+A++ENY ADG + IP VL Sbjct: 359 SNMWDFQARRMQARFRGKEDKKTQLLHTLNGSGLAVGRTLVAVMENYQQADGRIEIPEVL 418 Query: 414 RPYMNNLAVI 423 RPYM L I Sbjct: 419 RPYMGGLEYI 428 >gi|304408763|ref|ZP_07390384.1| seryl-tRNA synthetase [Shewanella baltica OS183] gi|307302766|ref|ZP_07582521.1| seryl-tRNA synthetase [Shewanella baltica BA175] gi|304352584|gb|EFM16981.1| seryl-tRNA synthetase [Shewanella baltica OS183] gi|306913126|gb|EFN43548.1| seryl-tRNA synthetase [Shewanella baltica BA175] Length = 428 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 200/429 (46%), Positives = 263/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E L R ++ L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELEVTAERLATRGFILDIAHLTQLEEKRKSLQVTTEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G V+A+ + L QL + E V + + +PN+P E PIG Sbjct: 61 AKARG--EDVEAIMAQVGDLGSQLDAKKIELAAVLEEVNTIAMSMPNLPDESAPIGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + ++H ++GE L +DF A K++G+RF V+ G +A L RA+GQ Sbjct: 119 ENVEVRRWGTPRTFDFPIKDHIDLGEGLNGLDFKNAVKITGSRFIVMKGQVARLNRAIGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV + ++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I++ LP++ T FRSEAGS G+DTRG++RQHQF K E+V I + ED Sbjct: 239 PLTNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE +L+RL L YR V LCTGD+GF + KTYD+EVWL QN YREISSCS Sbjct: 299 SMAALEALTGHAETVLQRLGLPYRTVILCTGDMGFGSSKTYDIEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR HTLNGSG+AVGR L+AILENY NADGS+TIP VLR Sbjct: 359 NMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSITIPEVLR 418 Query: 415 PYMNNLAVI 423 PYM L I Sbjct: 419 PYMGGLTKI 427 >gi|169825637|ref|YP_001695795.1| seryl-tRNA synthetase [Lysinibacillus sphaericus C3-41] gi|238688179|sp|B1HS47|SYS_LYSSC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|168990125|gb|ACA37665.1| Seryl-tRNA synthetase [Lysinibacillus sphaericus C3-41] Length = 426 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 185/428 (43%), Positives = 268/428 (62%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R N + L R+ + + +LD K R LI K E+++A RN S QI Sbjct: 1 MLDIKRVRDNFAEIKEMLLTRNEDLGNLDDFENLDAKRRELIAKTEELKAERNKVSEQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + + +++ L+ + ++V K ++ +PNVP E VP+GT+ Sbjct: 61 VMKR--NKENADEVIARMRQVGDEIKELDIQLNDVEDRFKDMMMRLPNVPHESVPVGTTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ + G+ P+ + H+++ L ++DF+R K++G+RF G A LERAL Sbjct: 119 DDNVEEYTWGEIPAFDFEIKAHWDLATDLKIVDFERGAKVTGSRFLFYRGLGARLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+DLH EHGY E+ P++V E++ GTGQ+PKF +D+F ++IPT+EV +TN Sbjct: 179 TFMMDLHAEEHGYEEMLPPVIVNRESLTGTGQLPKFEEDVFKLAETDYFMIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+ +++LP F + FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ + Sbjct: 239 FYRDEILTAEALPQGFAAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEESYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE++L+ L L YR + +CT DLGF+A K YDLEVW+ QN+YREISSCS + Sbjct: 299 LELLTGHAEKVLQLLGLPYRKLKMCTADLGFTAAKKYDLEVWIPAQNMYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + ++ HTLNGSG+A+GR + AILENY ADGSV IP VLRPYM Sbjct: 359 FQARRANIRFRREPNAKPEYVHTLNGSGLAIGRTVAAILENYQQADGSVVIPEVLRPYMG 418 Query: 419 NLAVIKKE 426 VI + Sbjct: 419 GKEVIAPK 426 >gi|226941475|ref|YP_002796549.1| Sys [Laribacter hongkongensis HLHK9] gi|254783032|sp|C1DBY7|SYS_LARHH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226716402|gb|ACO75540.1| Sys [Laribacter hongkongensis HLHK9] Length = 426 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 204/430 (47%), Positives = 274/430 (63%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + L R +E +L+ + + L + +D++ARRNS S Q+G+ Sbjct: 1 MLDIQLLRTQLDTVAARLAARGYTLDTEAFTALENERKALQTRTQDLQARRNSLSKQVGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G A+ E S L ++L E + L +L+ IPN+P E VP+G Sbjct: 61 AKRRG--EDASAVLAEVSGLGDELKANEAALEGLQGRLAELLQAIPNLPHESVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR VG S ++H +IG LG +D + KLSGARF+VL G +A L RAL Q Sbjct: 119 GNVEIRRVGVPRSFDFQVKDHVDIGTPLG-LDAETGAKLSGARFTVLRGQMARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSLT 237 FM++ H EHGYTEV P +V +MYGTGQ+PKF +D+F +L+PT+EV +T Sbjct: 178 FMLNTHADEHGYTEVYTPYMVNATSMYGTGQLPKFEEDLFRVPRGDENFYLVPTAEVPVT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N EI+++ LPLR+ P FRSEAG+ GRDTRGM+RQHQF K ELV + R E+S Sbjct: 238 NFVRDEIVKAADLPLRYVAHTPCFRSEAGAYGRDTRGMIRQHQFDKVELVQVVRPEESLN 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E + AE ILK+L L YRV+ LCTGD+GF + KTYD+EVWL Q+ YREISSCS+ G Sbjct: 298 ALETLTGHAETILKKLGLPYRVIVLCTGDMGFGSQKTYDIEVWLPAQDTYREISSCSSMG 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RRM +R++D K+ + HTLNGSG+AVGR L+A+LENY NADGSVT+P VLRPYM Sbjct: 358 DFQARRMQARFKDEAGKN-QLVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVLRPYM 416 Query: 418 NNLAVIKKEH 427 L + + Sbjct: 417 GGLEKLLPQG 426 >gi|307946877|ref|ZP_07662212.1| seryl-tRNA synthetase [Roseibium sp. TrichSKD4] gi|307770541|gb|EFO29767.1| seryl-tRNA synthetase [Roseibium sp. TrichSKD4] Length = 425 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 236/423 (55%), Positives = 309/423 (73%), Gaps = 3/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR+N E D AL KR EP + +++LD+ R I K+++++ RRNS S +IG+ Sbjct: 1 MFDIKWIRENSEAFDAALAKRGYEPSAAKLIALDDARRSHITKLQEVQERRNSTSKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A + AL NE + +K + E+EE ++ ++++ ++ IPN+P ++VP+G Sbjct: 61 AKATKDEEKAQALINEVAEIKAFIQSGEEEERKLVAAVEDAMAVIPNLPHDDVPVGEDEA 120 Query: 121 ENILIRSVGKKPSAIHL--SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+L R+ G+KP+ +EHFE+GE G MDF A LSG+RF VL G +A LERAL Sbjct: 121 DNVLYRTHGEKPTFTFNHAPKEHFELGEENGGMDFSTAANLSGSRFVVLKGQIARLERAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 GQFMID HT EHGYTEVS PLLV D+ ++GT Q+PKF +D+F T D +LIPT+EV LTN Sbjct: 181 GQFMIDTHTQEHGYTEVSPPLLVHDKPLFGTSQLPKFEEDLFKTGDH-YLIPTAEVPLTN 239 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L + +I+ ++LP+R + L FRSEAGSAGRDTRGMLRQHQF KCELVS+T+ EDS E Sbjct: 240 LVADQILIDEALPVRVSALTYCFRSEAGSAGRDTRGMLRQHQFQKCELVSVTKPEDSLNE 299 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ERML CAE IL++L LHYRV++LCTGD+GF A KTYD+EVWL GQ+ YREISSCS CG+ Sbjct: 300 LERMLGCAETILQKLGLHYRVMTLCTGDMGFGARKTYDIEVWLPGQDTYREISSCSVCGD 359 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRMN+R+R K HTLNGSG+AVGR LIA+LENY N DG++T+P VLRPYMN Sbjct: 360 FQARRMNARFRPQGEKQTVHVHTLNGSGIAVGRALIAVLENYQNGDGTITVPEVLRPYMN 419 Query: 419 NLA 421 L Sbjct: 420 GLE 422 >gi|218532490|ref|YP_002423306.1| seryl-tRNA synthetase [Methylobacterium chloromethanicum CM4] gi|254783035|sp|B7KPY5|SYS_METC4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|218524793|gb|ACK85378.1| seryl-tRNA synthetase [Methylobacterium chloromethanicum CM4] Length = 428 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 234/428 (54%), Positives = 298/428 (69%), Gaps = 1/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NPE D L++R L P S +++LD+ + + + + RRN+ S +IG Sbjct: 1 MHDIRAIRENPEAFDRDLERRGLAPLSAELIALDDVRKGAVSAAQAAQERRNALSKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E + LKE+ P LE + E +L + ++ IPN P ++VP G + Sbjct: 61 AKKAKDEARATELMAEVARLKEEAPGLEAAQGEAAKALDERLAAIPNRPKDDVPPGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ R + R+HFE+GEA GLMDF+ A KLSG+RF VL G LA LERALGQ Sbjct: 121 GNVEYRRFDSSRERLTQGRQHFELGEATGLMDFEAAAKLSGSRFVVLKGQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGYTEV P+LVR+EAM+GT Q+PKF DD F + WLIPT+EV LTNL Sbjct: 181 FMLDLHTGEHGYTEVVPPVLVREEAMFGTAQLPKFRDDQFAAGENFWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I+ LPLRFT L P FR+EAG+AGRDTRGMLRQHQF K ELVSIT E S EHE Sbjct: 241 RESILAEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFNKVELVSITAPEKSAEEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML+CAE +L++LDL YRV++LCTGD+GF++ KTYD+EVW+ GQ YREISSCS CG FQ Sbjct: 301 RMLACAEAVLQKLDLTYRVMTLCTGDMGFASQKTYDIEVWVPGQQTYREISSCSVCGEFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + + F HTLNGSGVAVGR LIA++ENY N DGSVTIP+ L+PYM L Sbjct: 361 ARRMNARYRAKEGRGVGFVHTLNGSGVAVGRALIAVMENYQNPDGSVTIPSALQPYMGGL 420 Query: 421 AVIK-KEH 427 I+ ++ Sbjct: 421 TRIEGPKN 428 >gi|269120640|ref|YP_003308817.1| seryl-tRNA synthetase [Sebaldella termitidis ATCC 33386] gi|268614518|gb|ACZ08886.1| seryl-tRNA synthetase [Sebaldella termitidis ATCC 33386] Length = 423 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 194/425 (45%), Positives = 275/425 (64%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D+++IR+N E + +LK R+ + +L DE R L+++ E ++ +N SA IG+ Sbjct: 1 MIDMKFIRENTEIIRKSLKDRNSNFDLDGLLKADEARRELLQEAETLKKEKNDQSALIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + D L + + +++ L+++ ++ L+ IPN E P+G S + Sbjct: 61 YKREGKNA--DELLEKMGKVSDKIKELDEKTAKIEEEQNYLLLTIPNKLHESTPVGASED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + H E+G LG++DF+R KLSG+RF+V G A LERAL Sbjct: 119 DNVEVRKWGEPKKFGFEPKPHEELGTELGILDFERGVKLSGSRFTVYKGMAAKLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHTSEHGY E+ P LV+ + M GTGQ+PKF DD + TTD +LIPT+EV+LTNL+ Sbjct: 179 FMLDLHTSEHGYEEMLTPQLVKRDIMVGTGQLPKFEDDAYKTTDDMFLIPTAEVTLTNLH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+ LP + FR EAGS G+D +G+LRQHQF K E+V I E+S+ E E Sbjct: 239 KDEILAESELPKYYCGFTACFRREAGSHGKDMKGILRQHQFNKVEMVKIVHPENSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE +L++L++ YRV++LC+GD+GF A KTYDLEVW+ QN YREISSCS +FQ Sbjct: 299 KMVNNAETVLQKLNIPYRVLALCSGDIGFGASKTYDLEVWIPSQNKYREISSCSNTEDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR +YR K F HTLNGSG+AVGR L+AI+ENY DGS+ IP VL PYM + Sbjct: 359 ARRAMIKYRSETDKKSYFVHTLNGSGLAVGRTLLAIMENYQKEDGSIEIPEVLIPYMGGI 418 Query: 421 AVIKK 425 IKK Sbjct: 419 TEIKK 423 >gi|89053561|ref|YP_509012.1| seryl-tRNA synthetase [Jannaschia sp. CCS1] gi|123286896|sp|Q28TH5|SYS_JANSC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|88863110|gb|ABD53987.1| seryl-tRNA synthetase [Jannaschia sp. CCS1] Length = 430 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 213/429 (49%), Positives = 285/429 (66%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+ P D AL R L S IL++DE R I + E +A RN+ S ++G+ Sbjct: 1 MHDIRAIRETPAAFDAALALRGLSAASADILAIDEARRAAITQAETAQADRNAASKEVGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ ST K+++ L++E + L ++ +PN+P +VP G + Sbjct: 61 AKASGDEAEFERLRALVSTKKDEIARLDEEAKAKDAELTAILEALPNLPSPDVPAGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ G + EHF+I MDF+ A KLSGARF L G +A + RAL Q Sbjct: 121 DNVEQHRRGTPRAFDFKPLEHFDIPGIAASMDFETAAKLSGARFVTLKGAVARVHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D HT E+G TE++AP+LVRDE MYGTGQ+PKFA+D + TT+G WLIPTSEV+LT+L Sbjct: 181 FMLDTHTEENGLTEINAPVLVRDETMYGTGQLPKFAEDSYQTTNGWWLIPTSEVTLTSLD 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S I++ +LP R+ + FRSEAGSAGRDT GMLRQHQF K E+VS+T + S E + Sbjct: 241 SGNIVDEATLPHRYAAHSLCFRSEAGSAGRDTAGMLRQHQFEKVEMVSVTHPDQSNAEQQ 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML+CAE IL +L++ YR V LC GD+GF A +TYD+E WL GQ+ YREISS STCG FQ Sbjct: 301 RMLACAEGILDKLEIPYRTVLLCAGDMGFGATRTYDIEAWLPGQDTYREISSVSTCGAFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + +F HTLNGSG+AVGRCLIA+LEN NADGSVT+P L P++ Sbjct: 361 ARRMNARFKPSDGGKPEFVHTLNGSGLAVGRCLIAVLENGQNADGSVTLPAALHPWLGGK 420 Query: 421 AVIKKEHIL 429 I E L Sbjct: 421 TRITAEGNL 429 >gi|299542086|ref|ZP_07052402.1| seryl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298725401|gb|EFI66049.1| seryl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 426 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 184/428 (42%), Positives = 269/428 (62%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R+N + L R+ + + LD K R LI K ED++A RN S QI Sbjct: 1 MLDIKRVRENFTEIKEMLLTRNEDLGNLDDFEDLDAKRRELIAKTEDLKAERNKVSEQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + + +++ L+ + ++V K ++ +PN+P E VP+GT+ Sbjct: 61 VMKR--NKENADEVITRMRQVGDEIKELDVQLNDVEERFKDMMMRLPNIPHESVPVGTTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ + G+ P+ + H+++ L ++DF+R K++G+RF G A LERAL Sbjct: 119 DDNVEEYTWGEIPTFDFDIKAHWDLATDLKIVDFERGAKVTGSRFLFYRGLGARLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+DLH EHGY E+ P++V +++ GTGQ+PKF +D+F ++IPT+EV +TN Sbjct: 179 TFMMDLHAEEHGYEEMLPPVIVNRDSLTGTGQLPKFEEDVFKLEETDYFMIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+ +++LP F + FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ + Sbjct: 239 FYRDEILPAEALPQGFAAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEESYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + S AE++L+ L L YR + +CT DLGF+A K YDLEVW+ QN+YREISSCS + Sbjct: 299 LELLTSHAEKVLQLLGLPYRKLKMCTADLGFTAAKKYDLEVWIPAQNMYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + ++ HTLNGSG+A+GR + A+LENY ADGSV IP VLRPYM Sbjct: 359 FQARRANIRFRREPNAKPEYVHTLNGSGLAIGRTVAALLENYQQADGSVVIPEVLRPYMG 418 Query: 419 NLAVIKKE 426 VI + Sbjct: 419 GKEVIAPK 426 >gi|226944892|ref|YP_002799965.1| seryl-tRNA synthetase [Azotobacter vinelandii DJ] gi|259511660|sp|C1DKY8|SYS_AZOVD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226719819|gb|ACO78990.1| seryl-tRNA synthetase [Azotobacter vinelandii DJ] Length = 426 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 277/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R + SL+ + + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLVRTQLQEIVGRLATRGFQLDVARFESLEAQRKAVQTRTEQLQAERNARSKTIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G + L E + L ++E + + L L+ IPN+P E VP+G Sbjct: 61 AKSRG--EDIAPLLAEVDRMGSDLEAGKRELDAIQAELDALMLSIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H +GE G +DF+ A KLSGARF+++ G +A L RAL Q Sbjct: 119 DNVEVRRWGVPRTFDFAIKDHVALGERHGWLDFETAAKLSGARFALMRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FM+DLHT EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMLDLHTGEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADFYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ + EI++++ LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I S+ Sbjct: 239 TNIVAGEILDARQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVRIVDPAKSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE++L+RL+L YRV++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEELTANAEKVLQRLELPYRVLALCTGDMGFSATKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M + VI Sbjct: 419 MGGIEVI 425 >gi|27262200|gb|AAN87381.1| Seryl-tRNA synthetase [Heliobacillus mobilis] Length = 424 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 187/427 (43%), Positives = 277/427 (64%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R NP+ ++ ALK R + L LD + R ++ ++E ++A+RN+ SA+I + Sbjct: 1 MLDTKFVRANPQVVEEALKNRGANLSLDDFLELDRRRRSILVEVEKLKAQRNAVSAEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A+ E + +Q+ L+ + ++ ++KL+ IPN+P VP+G S Sbjct: 61 KKKA--KEDAEAMILEMRQVGDQIKDLDDQLAQIEEDMEKLLYYIPNIPHASVPVGLSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R+ G S + H+++GE L ++DF R K++GARF+V G A LERA+ Sbjct: 119 ENVEMRTWGTPESFDFPVKAHWDLGEELDILDFQRGAKITGARFTVYKGLGARLERAIIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 M+D H + GYTE+ P +V ++M+GTGQ+PKFA+DMF + + IPT+EV +TNL Sbjct: 179 LMMDTHA-QRGYTEIFPPFMVNKQSMFGTGQLPKFAEDMFAVSGTEYFLIPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y +EI+E++ LP+ + FR+EAG+AGRDTRG++RQHQF K ELV T + S+ E Sbjct: 238 YGNEILEAEQLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTHPDHSYEEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AE IL+ L L YRV++LCTGD+GFS+ KTYD+EVWL YREISSCS +F Sbjct: 298 EKLTADAEHILQLLGLPYRVITLCTGDMGFSSAKTYDIEVWLPSFQTYREISSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSG+A+GR + AILENY DG+V IP LRPYM Sbjct: 358 QARRANIRFRPSPKAKPEFVHTLNGSGLAIGRTVAAILENYQQPDGTVLIPEALRPYMGT 417 Query: 420 LAVIKKE 426 ++ K+ Sbjct: 418 DRIVPKK 424 >gi|304405768|ref|ZP_07387426.1| seryl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304345011|gb|EFM10847.1| seryl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 426 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 189/428 (44%), Positives = 277/428 (64%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++W+R + + + AL R + +LD + R ++++ E ++ RRN+ S ++ Sbjct: 1 MLDVKWLRNDYDKVVQALVNRGKSEELVAAFPALDTRRREILQETEQLKNRRNTVSQEVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q G +AL E + +++ ++ E + + + +L+ +PN+P E VPIG S Sbjct: 61 QLKRTGG--DAEALIIEMREVGDRIKEIDDEVRALEAQIDELMLALPNLPNEGVPIGASE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ + + H++I + LG++DF+RA K++G+RF G A LERAL Sbjct: 119 EDNVEVRRAGEVKTFDFEPKPHWDIAQELGILDFERAAKVTGSRFVFYRGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+DLH+ +HGY E+ P +V +++YGTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 NFMMDLHSDKHGYEEILPPYIVNRDSLYGTGQLPKFEEDLFKIADSDYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ S+ LP F + FRSEAG+AGRDTRG++RQHQF K EL+ + + E S+ E Sbjct: 239 IAREEILSSEELPKYFVAYSACFRSEAGAAGRDTRGLIRQHQFNKVELLKLVKPETSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE++L+ L L YRV++LCTGD+GFSA KTYDLEVWL + YREISSCS + Sbjct: 299 LEAMTANAEKVLELLGLPYRVLALCTGDMGFSAAKTYDLEVWLPSADTYREISSCSNVED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R +F HTLNGSG+AVGR L AILENY ADGSV +P LRPYM Sbjct: 359 FQARRANIRFRREAKSKPEFVHTLNGSGLAVGRTLAAILENYQQADGSVIVPEALRPYMG 418 Query: 419 NLAVIKKE 426 + VI K+ Sbjct: 419 GIEVITKK 426 >gi|309378431|emb|CBX22926.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 431 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 274/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQSLRSNTAAVAERLAARGYEFDAARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A ++ + +K L + V L +S IPN+P E VP G Sbjct: 61 LKGRGRHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLSGIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRRVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT EHGYTE P +V +YGTGQ+PKF +D+F T ++LIPT+E Sbjct: 180 FMLDTHTLEHGYTEHYTPYIVNGGTLYGTGQLPKFGEDLFHVTRGGDESKTAQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAG+ G+D RG++RQHQF K E+V I E Sbjct: 240 VTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYGALEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 419 QPYMGGVAKLEAK 431 >gi|153000732|ref|YP_001366413.1| seryl-tRNA synthetase [Shewanella baltica OS185] gi|160875431|ref|YP_001554747.1| seryl-tRNA synthetase [Shewanella baltica OS195] gi|166223286|sp|A6WNG1|SYS_SHEB8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083585|sp|A9L269|SYS_SHEB9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|151365350|gb|ABS08350.1| seryl-tRNA synthetase [Shewanella baltica OS185] gi|160860953|gb|ABX49487.1| seryl-tRNA synthetase [Shewanella baltica OS195] gi|315267621|gb|ADT94474.1| seryl-tRNA synthetase [Shewanella baltica OS678] Length = 428 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 200/429 (46%), Positives = 263/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E L R ++ L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELEVTAERLATRGFILDIAHLTQLEEKRKSLQVATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G V+A+ + L QL + E V + + +PN+P E PIG Sbjct: 61 AKARG--EDVEAIMAQVGDLGSQLDAKKIELAAVLEEVNAIAMSMPNLPDESAPIGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + ++H ++GE L +DF A K++G+RF V+ G +A L RA+GQ Sbjct: 119 ENVEVRRWGTPRTFDFPIKDHIDLGEGLNGLDFKNAVKITGSRFIVMKGQVARLNRAIGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV + ++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I++ LP++ T FRSEAGS G+DTRG++RQHQF K E+V I + ED Sbjct: 239 PLTNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE +L+RL L YR V LCTGD+GF + KTYD+EVWL QN YREISSCS Sbjct: 299 SMAALEALTGHAETVLQRLGLPYRTVILCTGDMGFGSSKTYDIEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR HTLNGSG+AVGR L+AILENY NADGS+TIP VLR Sbjct: 359 NMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSITIPEVLR 418 Query: 415 PYMNNLAVI 423 PYM L I Sbjct: 419 PYMGGLTQI 427 >gi|120554467|ref|YP_958818.1| seryl-tRNA synthetase [Marinobacter aquaeolei VT8] gi|166222740|sp|A1U0W2|SYS_MARAV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|120324316|gb|ABM18631.1| seryl-tRNA synthetase [Marinobacter aquaeolei VT8] Length = 424 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 195/426 (45%), Positives = 270/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R E + L ++ E L+E+ R + + E++++ +N S IG+ Sbjct: 1 MLDPKRVRTQTEEIARRLAIKNFEFDIATFEQLEERRRAIQVRTENLQSEQNKRSKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E +LK+Q E E V SL + IPN+P ++VP G S + Sbjct: 61 AKAAG--EDIKPLLEEVESLKQQRGDAEDELRSVQESLNAFFAGIPNLPDDDVPPGASED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ R G ++H +GE L +DF++AT+L+ +RF+V+ G LA L RAL Q Sbjct: 119 DNVETRVWGTPREFDFEPKDHVALGEQLKGLDFEKATQLAHSRFAVMRGQLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+D HT +HGYTE P LV ++GTGQ+PKF +D+F T + +LIPT+EV TN Sbjct: 179 FMLDQHTLQHGYTEAYVPYLVNANTLFGTGQLPKFEEDLFRTAGDNPLYLIPTAEVPATN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L + I++ LPLR P FRSEAGS GRD RGM+RQHQF K ELV I R ++S Sbjct: 239 LVADTILDDAELPLRLVCHTPCFRSEAGSYGRDVRGMIRQHQFDKVELVHIVRPDESTQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE+IL+ L+L YRVV+LC GD+GFSA KTYDLEVWL GQ YREISSCS + Sbjct: 299 LEELTGHAEKILQLLELPYRVVTLCGGDMGFSAAKTYDLEVWLPGQGKYREISSCSNTRD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R+P++ + HTLNGSG+AVGR +IA++ENY ADGS+ +P VL+PYM Sbjct: 359 FQARRMQARWRNPDTGKPEPVHTLNGSGLAVGRAMIAVMENYQQADGSILVPEVLKPYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GVERIQ 424 >gi|301156526|emb|CBW15997.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Haemophilus parainfluenzae T3T1] Length = 429 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 194/431 (45%), Positives = 263/431 (61%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+E+ + L K E ++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFILDTEKLTALEEQRKDLQVKTETLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + EQL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEVDNMGEQLNEAKTQLDAVLAEINQIALSIPNIPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEIKDHVSLGEDANGLDFAAGAKLAGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL I++ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIVDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ Q+ YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQDTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLEVICK 429 >gi|171315517|ref|ZP_02904753.1| seryl-tRNA synthetase [Burkholderia ambifaria MEX-5] gi|171099354|gb|EDT44092.1| seryl-tRNA synthetase [Burkholderia ambifaria MEX-5] Length = 433 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 196/430 (45%), Positives = 271/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + +++ E + E+ + L L+ +PN+ E VP+G Sbjct: 61 MKGKG--EDTSAVMAEVGGIGDEMKASEVKLGEIQTRLSDLMLGMPNIAHESVPVGDDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++G LG +DF+ KL+GARF++L G +A L RAL Q Sbjct: 119 DNVEVRRWGTPRQFDFAVKDHVDVGTPLG-LDFETGAKLAGARFTMLRGSIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGY+E P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTLQHGYSETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGGENTITQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + + Sbjct: 238 ISLTNTVRESIVEGSALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLGLPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGMERI 426 >gi|270261178|ref|ZP_06189451.1| seryl-tRNA synthetase [Serratia odorifera 4Rx13] gi|270044662|gb|EFA17753.1| seryl-tRNA synthetase [Serratia odorifera 4Rx13] Length = 430 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 195/431 (45%), Positives = 266/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + + L +R + + + S +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRNELDAVAVKLARRGFKLDLDLLRSQEERRKVLQVESETLQAERNSRSKSIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L ++L + + + + ++ +PN+P + VP G + Sbjct: 61 AKARG--EDIEPLRREVNELGDKLDVAKAALDSLQTEIRDYALTLPNLPDDAVPNGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN + G+ R+H ++GE G +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 ENQEVCRWGEPRQYDFQVRDHVDLGEMAGGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF DD+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYLEAYVPYLVNHATLYGTGQLPKFGDDLFHTKPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLPL+ T P FR+EAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEILEEESLPLKMTAHTPCFRAEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L+L YR V LCTGD+GF ACKTYDLEVWL Q+ YREISS Sbjct: 299 EDSMAALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGACKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRSKTEKKPRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYMN L I Sbjct: 419 LRPYMNGLEYI 429 >gi|240949608|ref|ZP_04753943.1| seryl-tRNA synthetase [Actinobacillus minor NM305] gi|240295866|gb|EER46542.1| seryl-tRNA synthetase [Actinobacillus minor NM305] Length = 435 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 201/436 (46%), Positives = 271/436 (62%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + + LK KR+ E I SL+E+ + L K E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLDEIAQTLKIKRNFTLDVERIKSLEEQRKTLQVKTETLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + +L + +V + ++ ++ +PN+P EEVP+G Sbjct: 61 AAKARG--EDISVLLAEVDNMGNELTEAKNALDQVQAEIRDILLAVPNLPAEEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G+ ++H +GE LG +DF KL+ +RF V+ G LA L RAL Sbjct: 119 SENLEVARWGEPRQFDFEVKDHVTLGENLGGLDFAAGVKLTASRFVVMKGKLARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E + P LV + ++GTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPNETQRPFSL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EII+ ++LPLR+T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEIIDEETLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQFEKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM++R + N K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMSARCKAKNDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 IP VLRPYM VIK Sbjct: 419 IPEVLRPYMGGQEVIK 434 >gi|332993163|gb|AEF03218.1| seryl-tRNA synthetase [Alteromonas sp. SN2] Length = 430 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 203/431 (47%), Positives = 269/431 (62%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + E L R SL+EK + L K +D++ RN S IG+ Sbjct: 1 MLDPKCLRSDIEETAKRLAARGYNLDVATFNSLEEKRKTLQSKTQDLQNERNVRSKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G + L E L + L + E + + IPN+P E VP G + Sbjct: 61 AKSQG--EDIAPLLAEVGKLGDDLDAAKAELTVLLDEITAFTQGIPNLPHESVPEGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGE-ALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ I G+ + ++H +IGE +DF ATKL+G+RF V+ +A L RA+ Sbjct: 119 DNVEISRWGEPRAFDFDVKDHVDIGEGLNNSLDFATATKLTGSRFVVMRREMARLNRAIA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSE 233 QFM+D+HT+EHGY E+ P LV +++YGTGQ+PKF +D+F T LIPT+E Sbjct: 179 QFMLDVHTTEHGYDEMYVPFLVNADSLYGTGQLPKFGEDLFHTQPATEEGQGLSLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTN+ EI++ KSLP++ T P FRSEAGS GRDTRG++RQHQF K ELV + + E Sbjct: 239 VPLTNIARDEILDEKSLPIKMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 DSF E + AE IL++L+L YR V LCTGD+GF ACKTYDLEVWL QN YREISSC Sbjct: 299 DSFDALEELTQHAETILQKLELPYRKVLLCTGDMGFGACKTYDLEVWLPAQNTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+P + + HTLNGSG+AVGR L+AILENY ADGSVT+P L Sbjct: 359 SNMVDFQARRMQARFRNPETNKPELLHTLNGSGLAVGRTLVAILENYQQADGSVTVPKAL 418 Query: 414 RPYMNNLAVIK 424 PYMN L VIK Sbjct: 419 VPYMNGLEVIK 429 >gi|313896743|ref|ZP_07830291.1| serine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974660|gb|EFR40127.1| serine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] Length = 423 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 190/425 (44%), Positives = 271/425 (63%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + + LK R +LDE+ R +++ +E+ +ARRN+ S +IG Sbjct: 1 MLDMKFVRENLDAVREMLKNRCNGLDLSPFTALDEERRRILQDVEEKKARRNAVSKEIGV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + E TL +++ L+++ +V L+ L+ IPN+P +VP+G Sbjct: 61 RKKAG--EAAEDVVAEMRTLGDEIAALDEDLRDVELKLRDLLLQIPNMPKADVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G + H++IGE LG++D +RA K++GARF+ G A LERA Sbjct: 119 ENPEVRRTGTPRVFDFEPKAHWDIGEQLGILDAERAAKVTGARFTFYKGLGARLERACIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLH +HGYTE+ AP +V + +M GTGQ+PKFA+DMF +L+PT+EV TN Sbjct: 179 FMMDLHAEKHGYTEMLAPYIVNESSMVGTGQLPKFAEDMFKLEGLDYYLVPTAEVPTTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+++ LP +T+ FR+EAGSAGRDTRG++RQHQF K EL+ E S+ E Sbjct: 239 HRDEILDAAQLPEYYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVTPETSWDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M+ AE++L+ L+L YRV+ LCTGD+ F++ KTYDLEVW+ QN YREISSCS C ++ Sbjct: 299 ESMVEAAEDVLRTLELPYRVIQLCTGDMSFTSAKTYDLEVWMPAQNKYREISSCSNCTDY 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR F HTLNGSGVAVGR + AILEN DGSV +P L PYM Sbjct: 359 QARRANIKYRPARGAKPAFLHTLNGSGVAVGRTVAAILENNQQEDGSVVVPQALVPYMGG 418 Query: 420 LAVIK 424 + VI+ Sbjct: 419 VTVIR 423 >gi|212635388|ref|YP_002311913.1| seryl-tRNA synthetase [Shewanella piezotolerans WP3] gi|226701397|sp|B8CP82|SYS_SHEPW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|212556872|gb|ACJ29326.1| Seryl-tRNA synthetase, class IIa [Shewanella piezotolerans WP3] Length = 428 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 197/429 (45%), Positives = 265/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E L R E + L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELEVTAERLATRGFILDVERLGKLEEKRKSLQVSTEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V + + TL +L + E + L + +PN+P E PIG + Sbjct: 61 AKAKG--EDVAPIMAKVGTLGAELDAKKVELAALLDELNAIAMSVPNLPDESAPIGADES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ IR G ++H E+GE LG +DF A KL+G+RF ++ G +A + RAL Q Sbjct: 119 ENVEIRRWGTPKEFNFEVKDHVELGETLGGLDFKNAVKLTGSRFIIMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV ++++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEDSLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTN+ II+ LP+ T P FRSEAGS GRDTRG++RQHQF K ELV + + ED Sbjct: 239 PLTNIARDSIIDEDDLPVMMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE +L++L L YR V LCTGD+GF A KT+D+EVWL Q+ +REISSCS Sbjct: 299 SMQALEELTGHAETVLQKLGLPYRTVVLCTGDMGFGAAKTFDIEVWLPAQDTFREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQSRRM +R++ ++K HTLNGSG+AVGR L+A+LENY N DGS+T+P VLR Sbjct: 359 NMQDFQSRRMQARFKAKSAKKPSLLHTLNGSGLAVGRTLVAVLENYQNEDGSITVPEVLR 418 Query: 415 PYMNNLAVI 423 YM L I Sbjct: 419 GYMGGLEKI 427 >gi|56459772|ref|YP_155053.1| seryl-tRNA synthetase [Idiomarina loihiensis L2TR] gi|67461667|sp|Q5R0B0|SYS_IDILO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|56178782|gb|AAV81504.1| Seryl-tRNA synthetase [Idiomarina loihiensis L2TR] Length = 430 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 269/431 (62%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++ R+ + L R + + L+E+ + + + E ++A RNS S IG+ Sbjct: 1 MLDAKYFREELDQTAKKLATRGFDLDVAKLQKLEEQRKEVQVRTEQLQAERNSRSKAIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L + S L EQL ++E + L +I +PN+P +EVP G + Sbjct: 61 AKASG--EDIQPLLDAVSDLGEQLDNAKEELKVIQQELNDIIMGVPNLPADEVPEGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEA-LGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN + + GK S ++H ++GEA MDF+ A KL+GARF V+ G +A + RAL Sbjct: 119 ENQEVLTWGKPKSFDFEVKDHVDLGEALAKGMDFETAAKLTGARFVVMRGGIARMHRALT 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------TDGRWLIPTSE 233 QFM+DLHT EHGY E P +V +++YGTGQ+PKF D+F LIPT+E Sbjct: 179 QFMLDLHTDEHGYLETYVPYMVNQDSLYGTGQLPKFGKDLFHIEGESQDQIPMSLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTNLY EI + + LPL+FT P FRSEAGS GRDTRG++RQHQF K ELV + + E Sbjct: 239 VPLTNLYRDEIADEEELPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFDKVELVWLVKPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E++ AE +L++L+L YR V LCTGD+GF A KTYDLEVWL Q YREISSC Sbjct: 299 QSMDALEQLTGHAETVLQKLELPYRKVLLCTGDMGFGAAKTYDLEVWLPAQEAYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R +K + HTLNGSG+AVGR L+A+LENY DGS+ +P VL Sbjct: 359 SNMQDFQARRMQARFRRKGAKKPELMHTLNGSGLAVGRALVAVLENYQQEDGSIVVPEVL 418 Query: 414 RPYMNNLAVIK 424 RPYM + V+K Sbjct: 419 RPYMGGVEVLK 429 >gi|312882486|ref|ZP_07742227.1| seryl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309369886|gb|EFP97397.1| seryl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 435 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 191/434 (44%), Positives = 271/434 (62%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + + I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAEKLARRGFKLDVDTIRTLEEQRKSIQVEVENLQSSRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ +A+K + L L + + + S L+++ +PN+P ++VP G + Sbjct: 61 KMAAGDKEGAEAIKLQIGNLGNDLEAKKAQLDHIQSQLEEVTLSVPNLPADDVPQGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ S ++H ++GE G +DF ATKL+GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKSYDFELKDHVDLGEIGGGLDFASATKLTGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF +D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGEDLFHTEPLTEKVNDEDPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN+ I + LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPLTNMVRDTITDEDELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E++ + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMDALEQLTAHAEKVLQLLELPYRKVILCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN DG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQQKDGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YMN L I Sbjct: 421 PAVLQKYMNGLTHI 434 >gi|126652931|ref|ZP_01725073.1| seryl-tRNA synthetase [Bacillus sp. B14905] gi|126590261|gb|EAZ84383.1| seryl-tRNA synthetase [Bacillus sp. B14905] Length = 426 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 183/428 (42%), Positives = 268/428 (62%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R N + L R+ + + +LD K R LI K E+++A RN S QI Sbjct: 1 MLDIKRVRDNFAEIKEMLLTRNEDLGNLDDFENLDAKRRELIAKTEELKAERNKVSEQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + + +++ L+ + ++V K ++ +PNVP E VP+GT+ Sbjct: 61 VMKR--NKENADEVIARMRQVGDEIKELDIQLNDVEDRFKDMMMRLPNVPHESVPVGTTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ + G+ P+ + H+++ L ++DF+R K++G+RF G A LERAL Sbjct: 119 DDNVEEYTWGEIPAFDFDIKAHWDLATDLKIVDFERGAKVTGSRFLFYRGLGARLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+DLH EHGY E+ P++V +++ GTGQ+PKF +D+F ++IPT+EV +TN Sbjct: 179 TFMMDLHAEEHGYEEMLPPVIVNRDSLTGTGQLPKFEEDVFKLEETDYFMIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+ +++LP F + FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ + Sbjct: 239 FYRDEILTAEALPQGFAAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEESYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE++L+ L L YR + +CT DLGF+A K YDLEVW+ QN+YREISSCS + Sbjct: 299 LELLTGHAEKVLQLLGLPYRKLKMCTADLGFTAAKKYDLEVWIPAQNMYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + ++ HTLNGSG+A+GR + A+LENY ADGSV IP VLRPYM Sbjct: 359 FQARRANIRFRRDPNAKPEYVHTLNGSGLAIGRTVAALLENYQQADGSVVIPEVLRPYMG 418 Query: 419 NLAVIKKE 426 VI + Sbjct: 419 GKEVIAPK 426 >gi|150387877|ref|YP_001317926.1| seryl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|166987307|sp|A6TJ99|SYS_ALKMQ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|149947739|gb|ABR46267.1| seryl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 426 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 183/428 (42%), Positives = 274/428 (64%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR N + + A+ +R + + +++LDE R +++++E ++ + + S ++ Sbjct: 1 MLDIKRIRMNLDEIKAAMARRGEKGFDLDAVVALDEDRRTILQEVEQMKNEQKTVSKEVP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG V + + TL ++ L+ + E+ +++++ IPNVP +VP G + Sbjct: 61 KLKKEGK--DVSEVMEKMKTLSAEIKNLDVKVKEIEEKMEEILLRIPNVPHPDVPQGDTD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++NI +R+ G+ + H+E+G LG++DF+ A+K++G+RF++ G A LERAL Sbjct: 119 DDNIEVRTWGEPTQFSFEPKPHWEVGVNLGILDFEAASKVTGSRFTLYRGMAARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLHT EHGYTE+ P +V +M GTGQ+PKF +D F + +PT+EV +TN Sbjct: 179 SFMLDLHTDEHGYTELLPPFMVNRASMIGTGQLPKFEEDAFKIPQKDYFLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y +IIE LP+++ P FRSEAGSAGRDTRG++RQHQF K ELV R EDS+ E Sbjct: 239 IYRDDIIEGDQLPIKYVAYTPCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVRPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE++L+ L L YR+V +CTGDLGF+A YD+EVW+ N Y EISSCS + Sbjct: 299 LEKLTNNAEKVLQLLGLPYRIVRICTGDLGFTAAFKYDIEVWMPSYNRYVEISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR ++F HTLNGSG+AVGR + AILEN+ DGSV IP +R YM Sbjct: 359 FQARRANIRYRPDTKSKVEFVHTLNGSGLAVGRTVAAILENFQQEDGSVVIPEAIRSYMK 418 Query: 419 NLAVIKKE 426 I + Sbjct: 419 GFEKITAK 426 >gi|312898436|ref|ZP_07757826.1| seryl-tRNA synthetase [Megasphaera micronuciformis F0359] gi|310620355|gb|EFQ03925.1| seryl-tRNA synthetase [Megasphaera micronuciformis F0359] Length = 425 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 189/426 (44%), Positives = 263/426 (61%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++IR++ E + LK RH + + +L D + R L+ ++E ++ RRN + +I Sbjct: 1 MLDIKFIREHTEEVRQNLKNRHAQVDLDALLEADARRRELLGQVEAMKNRRNDVTKEISV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N D L +++ +L+ + E + + IPN+ VP+G + Sbjct: 61 LKR--NKENADEKIAAMKELGDEIAVLDGKVKETEEQMLAVQLMIPNMCHPSVPVGNDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G + ++ H+EIGE LG++D +RA K++G+RF G A LERA+ Sbjct: 119 DNPEVRKWGDVTTFDFEAKNHWEIGEHLGILDAERAGKVAGSRFYFYLGAGARLERAVYN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+D+HT GYTEV P +V ++M GTGQ+PKF +DMF ++IPT+EV LTN Sbjct: 179 FMLDMHTEVDGYTEVIPPYIVNRDSMLGTGQLPKFYEDMFRIEGQEMFMIPTAEVPLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EII+ LP+ T + P FR+EAGSAGRDTRG++RQHQF K E+V E S+ E Sbjct: 239 YRGEIIDGNKLPVYLTAMTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKYVAPETSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++ + AE IL+ L L Y VV LCTGD+GFSA KT+D+EVW Q YREISSCS +F Sbjct: 299 DKLTNNAEAILQALKLPYHVVCLCTGDIGFSAAKTFDVEVWFPAQGKYREISSCSNTEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R ++ HTLNGSG+AVGR + AILENY ADGSV +P VLRPYM Sbjct: 359 QARRANIRFRRDAKSKPEYVHTLNGSGLAVGRTVAAILENYQQADGSVIVPEVLRPYMK- 417 Query: 420 LAVIKK 425 VIK Sbjct: 418 CDVIKP 423 >gi|315925305|ref|ZP_07921517.1| serine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621426|gb|EFV01395.1| serine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] Length = 424 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 191/426 (44%), Positives = 274/426 (64%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IRQNPE + AL R E + +L LD + R +I ++E ++A++N+ S I Q Sbjct: 1 MLDIKRIRQNPEAVLAALGSRGGEYSVDKVLELDNQRREIIGRVEALKAQKNATSKAIPQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + L E + E++ ++ ++ +++ + +PN+P EV +G + Sbjct: 61 RKLAG--EDLAPLFAEMKAVSEKIKADDEALADINQAIRNELLGLPNIPNPEVAVGLDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ IR G+ + + H+++G L ++DFDRA KL+GARFS+ G A LERAL Sbjct: 119 ENVEIRKWGEPTAFDFEPKAHWDLGTELDILDFDRAHKLTGARFSMFKGLGAKLERALTN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+ +HT + Y E++ P +V +M GTGQ+PKF +D F + +L+PT+EV +TN+ Sbjct: 179 FMLYVHTVDQDYIEIAPPFMVNRASMTGTGQLPKFEEDAFHLEREDFFLVPTAEVPVTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EII ++P+ +T P FR EAGSAGRDTRG++R HQF K E+V R EDS+ E Sbjct: 239 HRDEIIPDDAMPIYYTAYTPCFREEAGSAGRDTRGLIRNHQFDKVEMVKFVRPEDSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AE IL++L + YRVV LCTGDLGFS+ KTYD+EVW+ Y EISSCS ++ Sbjct: 299 EKLTADAEVILQQLAIPYRVVELCTGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFEDY 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYRDP +K ++ HTLNGSG+AVGR A+LENY NADGS+TIP L YM Sbjct: 359 QARRANIRYRDPATKHTQYVHTLNGSGLAVGRTFAAVLENYQNADGSITIPDALVHYMGG 418 Query: 420 LAVIKK 425 + IKK Sbjct: 419 VTKIKK 424 >gi|284047518|ref|YP_003397857.1| seryl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283951739|gb|ADB46542.1| seryl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 426 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 195/419 (46%), Positives = 265/419 (63%), Gaps = 3/419 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R N E + ALK RH + E LD++ R L++++E +++RN+ SA+I Q Sbjct: 1 MLDLKFVRDNTEKVAQALKNRHAKVDLEEFKKLDQERRSLLQEVEADKSQRNTVSAEISQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L +++ +K+ +V + L+ ++ IPN+P +VP+G Sbjct: 61 MKRNG--EDATEKITAMRALGDKIAEADKKVKDVEARLQAVMLTIPNMPAADVPVGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G+ + H+EIGE LG++D +RA K+SGARF G A LERA+ Sbjct: 119 ENPEVRKWGEPTHFDFEPKAHWEIGEKLGILDAERAAKVSGARFYYYKGAGARLERAVYN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+D HT + GY EV P +V +M GTGQ+PKF +DM+ +LIPT+EV LTN Sbjct: 179 FMLDQHTRKDGYMEVIPPYIVNTASMTGTGQLPKFHEDMYKVEGQDMYLIPTAEVPLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+ LP+ T + P FR+EAGSAGRDTRG++RQHQF K E+V + E S+ E Sbjct: 239 YRGEILNGDDLPIYLTAMTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKFCKPETSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+++ AE+ILK L L Y VV LCTGDLGFSA K YD+EVW QN YREISSCS +F Sbjct: 299 EKLVGNAEDILKALKLPYHVVCLCTGDLGFSAAKCYDVEVWFPEQNKYREISSCSNTEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RR N R+R ++ HTLNGSG+AVGR + AILENY ADGSV +P VLRPYM Sbjct: 359 QARRANIRFRRDAKSKPEYVHTLNGSGLAVGRTVAAILENYQQADGSVVVPEVLRPYMG 417 >gi|325578023|ref|ZP_08148217.1| serine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] gi|325160256|gb|EGC72384.1| serine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] Length = 429 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 194/431 (45%), Positives = 263/431 (61%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+E+ + L K E ++A RN+ S IG Sbjct: 1 MIDPNLLRNNLTEVAEKLKVKRNFILDTEKLTALEEQRKDLQVKTETLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + EQL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEVDNMGEQLNEAKTQLDAVLAEINQIALSIPNIPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEIKDHVSLGEDANGLDFAAGAKLAGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL I++ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIVDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ Q+ YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQDTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLEVICK 429 >gi|239502305|ref|ZP_04661615.1| seryl-tRNA synthetase [Acinetobacter baumannii AB900] Length = 423 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 190/425 (44%), Positives = 266/425 (62%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 1 MIDPKLLRNNIEVVNAALAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G N Sbjct: 61 IKKSGG--DASEIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 119 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 239 FVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 299 LEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY DGS+ IP VLRPYM Sbjct: 359 FQARRMKARYR-MDQKKTELVHTLNGSGLAVGRTLLAVMENYQREDGSIEIPEVLRPYMG 417 Query: 419 NLAVI 423 I Sbjct: 418 GATFI 422 >gi|261365211|ref|ZP_05978094.1| serine--tRNA ligase [Neisseria mucosa ATCC 25996] gi|288566473|gb|EFC88033.1| serine--tRNA ligase [Neisseria mucosa ATCC 25996] Length = 431 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 272/431 (63%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + L +R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQQLRSHTAAVAERLAQRGYEFDTARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMKGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + I+ LPL+ T +P FRSEAG+ G+D RG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIVAGSDLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIK 424 +PYM + I+ Sbjct: 419 QPYMGGVEKIE 429 >gi|71737900|ref|YP_275259.1| seryl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485413|ref|ZP_05639454.1| seryl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625403|ref|ZP_06458357.1| seryl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649314|ref|ZP_06480657.1| seryl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250] gi|298487528|ref|ZP_07005570.1| Seryl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|123635963|sp|Q48H74|SYS_PSE14 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|71558453|gb|AAZ37664.1| seryl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157912|gb|EFH98990.1| Seryl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866860|gb|EGH01569.1| seryl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330987919|gb|EGH86022.1| seryl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 426 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 273/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDGIQAELDALVLSIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTAFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F T +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKITREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I EDS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPEDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|138893692|ref|YP_001124145.1| seryl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|166222728|sp|A4IJ96|SYS_GEOTN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|134265205|gb|ABO65400.1| Seryl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] Length = 424 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R + + L +R + + LD++ R LI ++E+++++RN S QI Sbjct: 1 MLDVKLLRTQFQEVKEKLLQRGDDLANIDRFEQLDKERRRLIAQVEELKSKRNEVSQQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E ++L E + +++ ++++ ++ L L+ IPNVP E VP+G S Sbjct: 61 VLKREKK--DAESLIAEMREVGDRIKQMDEQIRQLEEELDSLLLSIPNVPHESVPVGQSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ S + H++I + LGL+DF+RA K++G+RF G A LERAL Sbjct: 119 EDNVEVRRWGEPRSFSFEPKPHWDIADQLGLLDFERAAKVAGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D+H E GY EV P LV +M GTGQ+PKFA+D F + + IPT+EV +TN Sbjct: 179 NFMLDIHLDEFGYQEVLPPYLVNRASMIGTGQLPKFAEDAFHLDNEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ + LPL + + FR+EAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 LHRDEILTADDLPLYYAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+RL L YRVV+LCTGDLGFSA KTYD+EVWL YREISSCS Sbjct: 299 LEKLTHQAETILQRLGLPYRVVALCTGDLGFSAAKTYDIEVWLPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY DGSV IP LRPYM Sbjct: 359 FQARRANIRFRREPKAKPEYVHTLNGSGLAIGRTVAAILENYQQEDGSVVIPGALRPYMG 418 Query: 419 NLAVIK 424 N VI+ Sbjct: 419 NRDVIR 424 >gi|212637862|ref|YP_002314382.1| seryl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|212559342|gb|ACJ32397.1| Seryl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 426 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 193/425 (45%), Positives = 264/425 (62%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++++R + E + L+ R + E LD + R LI + E+++ +RN S QI Sbjct: 3 MLDLKFLRTHFEEVKQKLQHRGEDLADFERFEQLDRRRRELIAQAEELKNKRNDVSQQIA 62 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D L E + +++ +L+ E EV L L+ IPN+P E VPIG S Sbjct: 63 LLKREKK--DADHLIAEMRQVGDRIKVLDDELREVEQQLDTLLLSIPNIPHESVPIGESE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ S + H+EI + LG++DF+RA K++G+RF G A LERAL Sbjct: 121 DDNVEIRKWGEPRSFSFEPKPHWEIADQLGILDFERAAKVTGSRFVFYKGLGARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D+H +HGY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 181 NFMLDVHVEQHGYEEVLPPYIVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ + LP+++ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 241 LHRDEILSADDLPIKYAAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE IL+ L L YRV+S+CT DLGF+A K YD+EVWL YREISSCS Sbjct: 301 LEKLTNDAERILQLLGLPYRVMSMCTADLGFTAAKKYDIEVWLPSYGTYREISSCSNFEA 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+A+GR + AILENY DG+V IP VLRPYM Sbjct: 361 FQARRANIRFRRDPKAKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTVVIPEVLRPYMG 420 Query: 419 NLAVI 423 VI Sbjct: 421 GKEVI 425 >gi|292493548|ref|YP_003528987.1| seryl-tRNA synthetase [Nitrosococcus halophilus Nc4] gi|291582143|gb|ADE16600.1| seryl-tRNA synthetase [Nitrosococcus halophilus Nc4] Length = 429 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 198/426 (46%), Positives = 276/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R L +R E +L+ + + + + ++++A RN+ S IG+ Sbjct: 1 MLDPKLLRNALAETARQLARRGFELDVTAFAALEAERKEVQVRTQELQAERNARSKAIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G L E + L ++L E E+ S + +++ IPN+P P G Sbjct: 61 AKAQG--EDAAPLLVEVAELGDRLKAAEARLGEIQSQIDEILMGIPNLPDASTPEGRDER 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ P+ ++H ++G LG MDF+ A KLSGARF L+G LA L RAL Q Sbjct: 119 DNVEVRRWGEPPALGFAPKDHVDLGGPLG-MDFETAAKLSGARFVTLSGLLARLHRALIQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTNL 239 FM+D+HTSEHGYTEV P LV +++ GTGQ+PKF +D+F D +LIPT+EV +TNL Sbjct: 178 FMLDVHTSEHGYTEVYVPYLVNRQSLEGTGQLPKFEEDLFAIRDTGYYLIPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 EI+ ++ LPL++ P FRSEAGS G+DTRGM+RQHQF K ELV I +DS H Sbjct: 238 VRAEILPAERLPLKYVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQIVPPKDSPQAH 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AE IL+RL L YRV++LC GDLGF++ KTYDLEVWL GQ YREISSCS +F Sbjct: 298 ENLTGHAEVILQRLGLPYRVMNLCAGDLGFASSKTYDLEVWLPGQQAYREISSCSNFLDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+ +R+RDP ++ + HTLNGSG+AVGR L+A++ENY ADGS+ +P VL PYM Sbjct: 358 QARRLQARWRDPETQKPAWLHTLNGSGLAVGRALVAVMENYQQADGSIRVPEVLHPYMGG 417 Query: 420 LAVIKK 425 ++VI+ Sbjct: 418 VSVIQP 423 >gi|15602123|ref|NP_245195.1| seryl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431879|sp|P57836|SYS_PASMU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|12720487|gb|AAK02342.1| SerS [Pasteurella multocida subsp. multocida str. Pm70] Length = 428 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 204/429 (47%), Positives = 268/429 (62%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N E + LK KR+ + L+E+ + L K E ++A RN+ S IG Sbjct: 1 MIDPNLLRNNLEEVAEKLKVKRNFVLDVALLSELEEQRKSLQVKTESLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A G + AL NE + +L + EV + + +++ IPN+P +EVP+G Sbjct: 61 QAKARG--EDISALLNEVEHMGIELSTTKAHLDEVLAEINQIVLAIPNLPADEVPLGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G + ++H +GE L +DF KLSG+RF V+ G +A L RAL Sbjct: 119 SENLEVFRWGTPKTFDFDVKDHVSLGEGLKGLDFAAGVKLSGSRFVVMKGQIAKLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----DGRWLIPTSEV 234 QFM+DLHT +HGYTE P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYTETYVPYLVNHATLYGTGQLPKFGEDLFHTNALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL EI++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I E Sbjct: 239 PVTNLVRDEILDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVAPET 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVWL QN YREISSCS Sbjct: 299 SMQVLEELTGQAEKVLQLLELPYRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R R K + HTLNGSG+AVGR L+AILENY NADG++T+P+VLR Sbjct: 359 NMWDFQARRMQARCRSKTDKKTRLVHTLNGSGLAVGRTLVAILENYQNADGTITVPSVLR 418 Query: 415 PYMNNLAVI 423 PYM LA I Sbjct: 419 PYMGGLAQI 427 >gi|253582385|ref|ZP_04859608.1| seryl-tRNA synthetase [Fusobacterium varium ATCC 27725] gi|251835924|gb|EES64462.1| seryl-tRNA synthetase [Fusobacterium varium ATCC 27725] Length = 423 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 196/425 (46%), Positives = 270/425 (63%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML++++IR+N E + L R+ LDE+ R ++ ++E ++ +RN+ SA+I + Sbjct: 1 MLELKFIRENRELVKEMLANRNSNIDLTEFDKLDEERRAILGEVELLKQKRNTESAEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + E + Q+ L+ + EV L IPN+ E P+G Sbjct: 61 LKKEKK--DASQIIEEMGKVSAQIKELDTKLAEVDEKLTYFQMVIPNMYQEGTPVGKDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + H+EIGE LG++DF+R +KL G+RF + G A +ERAL Sbjct: 119 SNVEVRRWGTPRKFTFEPKSHWEIGENLGILDFERGSKLGGSRFVLYRGMGARIERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT+EHGYTE P LV+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 179 FMLDMHTTEHGYTEHITPFLVKREICEGTGQLPKFEEDMYKTTDDMFLISTSEITMTNIH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ K LP +T +P FR EAGS G+D +G++R HQF K E++ I +E S+ E E Sbjct: 239 RKEILDEKELPKYYTAYSPCFRREAGSYGKDVKGIIRVHQFNKVEMIKIATQESSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M+ AEE+LKRL+L YRV+ LCTGDLGFSA KTYDLEVWL QN YREISSCS C +FQ Sbjct: 299 KMVVNAEEVLKRLELPYRVIQLCTGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCTDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR S +F HTLNGSG+AVGR +AI+ENY DGS IP L PYM + Sbjct: 359 ARRMGLKYRPNGSSKSEFCHTLNGSGLAVGRTFVAIMENYQQEDGSFLIPKALVPYMGGI 418 Query: 421 AVIKK 425 VIKK Sbjct: 419 DVIKK 423 >gi|149182704|ref|ZP_01861171.1| seryl-tRNA synthetase [Bacillus sp. SG-1] gi|148849614|gb|EDL63797.1| seryl-tRNA synthetase [Bacillus sp. SG-1] Length = 426 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 191/428 (44%), Positives = 269/428 (62%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R N E + L+ R + E LD + R L+ + E+++++RN S +I Sbjct: 1 MLDIRHLRANFEDVKNRLQDRGEDLSDFEKFEELDVRRRELLVETENLKSKRNEVSQKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D L E + + L++E EV SL L+ IPN+P E VP+G + Sbjct: 61 EMKK--NKENADDLIVEMREVGGMIKKLDEELKEVEGSLDHLMLSIPNIPHESVPVGATE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ R G+ PS + H+++ LG++DF+RA+K++G+RF G A LERAL Sbjct: 119 DDNVEARKWGEVPSFDFEPKPHWDLATELGVLDFERASKVTGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH EHGY E+ P +V E+M GTGQ+PKF +D F + +PT+EV +TN Sbjct: 179 NFMMDLHMDEHGYEEMLPPYMVNRESMTGTGQLPKFEEDAFLIESEDYFLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ + LP+ +T + FRSEAGSAGRDTRG++RQHQF K ELV R E+S+ E Sbjct: 239 YHRDEILTNDQLPIAYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVRPEESYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE++L+ L+L YRV+S+CT DLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTGHAEKVLQLLNLPYRVMSMCTADLGFTAAKKYDIEVWIPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+A+GR + AILENY ADGS+ IP VLRPYM Sbjct: 359 FQARRANIRFRREPGCKPEHVHTLNGSGLALGRTVAAILENYQQADGSIVIPEVLRPYMR 418 Query: 419 NLAVIKKE 426 + VIK + Sbjct: 419 GVEVIKPK 426 >gi|261417513|ref|YP_003251195.1| seryl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|319765171|ref|YP_004130672.1| seryl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|261373970|gb|ACX76713.1| seryl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|317110037|gb|ADU92529.1| seryl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 424 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R E + L +R + + LD+ R LI ++E+++++RN S QI Sbjct: 1 MLDVKILRTQFEEVKEKLMQRGGDLTNIDRFEQLDKDRRRLIAEVEELKSKRNDVSQQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E + L + + +++ ++++ ++ + L L+ IPNVP E VPIG S Sbjct: 61 VLKREKK--DAEPLIAQMREVGDRIKRMDEQIRQLEAELDDLLLSIPNVPHESVPIGQSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ S + H+EI + LGL+DF+RA K++G+RF G A LERAL Sbjct: 119 EDNVEVRRWGEPRSFSFEPKPHWEIADRLGLLDFERAAKVAGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D+H E GY EV P LV +M GTGQ+PKFA+D+F + IPT+EV +TN Sbjct: 179 NFMLDIHLDEFGYEEVLPPYLVNRASMIGTGQLPKFAEDVFHLDSEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ + LP+ + + FR+EAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 LHRDEILAADDLPIYYAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+RL L YRVV+LCTGDLGFSA KTYD+EVWL YREISSCS Sbjct: 299 LEKLTRQAETILQRLGLPYRVVALCTGDLGFSAAKTYDIEVWLPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY DGSV +P LRPYM Sbjct: 359 FQARRANIRFRRDPKAKPEYVHTLNGSGLAIGRTVAAILENYQQEDGSVIVPEALRPYMG 418 Query: 419 NLAVIK 424 N VI+ Sbjct: 419 NRDVIR 424 >gi|258517403|ref|YP_003193625.1| seryl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257781108|gb|ACV65002.1| seryl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 423 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 187/426 (43%), Positives = 275/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R NPE + AL KR + L LDE+ R + +E ++ RRN+ S ++G+ Sbjct: 1 MLDLKFVRNNPETVKEALAKRGNRGSLDEFLKLDEQRREKLVVVEQLKNRRNTVSQEVGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + + + E + +++ L+ + + L+ ++ IPN+P VP+G S Sbjct: 61 LKKEGQPA--EQIVLEMRQVSQEIKDLDDQLRVIEEELQAILLGIPNIPDVSVPVGKSET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI IR G+ + H++IGE L ++DF+R K++GARFS G A LERAL Sbjct: 119 DNIEIRLWGEPTKFDFEPKAHWDIGEGLDIIDFERGAKVTGARFSFYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHTS+H Y E+ P + ++M GTGQ+PKFA+DMF +LIPT+EV +TNL Sbjct: 179 FMLDLHTSQHNYVEIFPPFIANQDSMQGTGQLPKFAEDMFKLENTNYYLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI++ + LP+ + FR+EAG+AGRDTRG++RQHQF K E+V + SF E Sbjct: 239 YREEILDGEKLPICHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVEMVKFCHPDTSFEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ++++ AE++L+ L+L YR++ LCTGDLGFS+ KT+DLEVWL G YREISSCS +F Sbjct: 299 DKLVLNAEKVLQLLELPYRLIILCTGDLGFSSAKTFDLEVWLPGYQTYREISSCSNFTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR +++ +K ++ HTLNGSG+A+GR L A+LENY DGSV +P VL+PYM Sbjct: 359 QARRAGIKFKTGKAK-PQYVHTLNGSGLAIGRTLAAVLENYQQRDGSVKVPRVLQPYMGG 417 Query: 420 LAVIKK 425 L I + Sbjct: 418 LKEIAR 423 >gi|213157669|ref|YP_002320467.1| seryl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|215482472|ref|YP_002324658.1| seryl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|301344900|ref|ZP_07225641.1| seryl-tRNA synthetase [Acinetobacter baumannii AB056] gi|301511071|ref|ZP_07236308.1| seryl-tRNA synthetase [Acinetobacter baumannii AB058] gi|332854214|ref|ZP_08435234.1| serine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332866344|ref|ZP_08436949.1| serine--tRNA ligase [Acinetobacter baumannii 6013113] gi|226701385|sp|B7GXI2|SYS_ACIB3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226701417|sp|B7I6V5|SYS_ACIB5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|213056829|gb|ACJ41731.1| seryl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|213987623|gb|ACJ57922.1| seryl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|332728139|gb|EGJ59527.1| serine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332734692|gb|EGJ65796.1| serine--tRNA ligase [Acinetobacter baumannii 6013113] Length = 423 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 189/425 (44%), Positives = 265/425 (62%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ L KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 1 MIDPKLLRNNIEVVNAGLAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G N Sbjct: 61 IKKSGG--DASEIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 119 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 239 FVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 299 LEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY DGS+ IP VLRPYM Sbjct: 359 FQARRMKARYR-MDQKKTELVHTLNGSGLAVGRTLLAVMENYQREDGSIEIPEVLRPYMG 417 Query: 419 NLAVI 423 I Sbjct: 418 GATFI 422 >gi|330875798|gb|EGH09947.1| seryl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 426 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 273/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDAIQAELDALVLNIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTAFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I +DS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|237748955|ref|ZP_04579435.1| seryl-tRNA synthetase [Oxalobacter formigenes OXCC13] gi|229380317|gb|EEO30408.1| seryl-tRNA synthetase [Oxalobacter formigenes OXCC13] Length = 436 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 201/433 (46%), Positives = 273/433 (63%), Gaps = 12/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DIQ +R++ + + LK R E L+ + R L + E+++ARRNS S QIG Sbjct: 1 MIDIQLLRKDIDAVAARLKTRKFELDVNAFNVLESERRQLQTQTEEMQARRNSLSKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E S + +QL E E+ + L + + IPNVP E VP+G + Sbjct: 61 LK--GKKEDASAVMAEVSGIGDQLKANEVALAELQAKLSEFMLSIPNVPHESVPVGQDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R VG ++H ++G LG +DF+ ATKL+GARF ++ G++A L RAL Q Sbjct: 119 ANVEVRRVGTPREFDFEVKDHVDVGTPLG-LDFETATKLTGARFCLMRGNMARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--------MFCTTDGRWLIPTS 232 FM+DL T+EHGYTE P + +++YGTGQ+PKFA+D + +LIPT+ Sbjct: 178 FMLDLQTTEHGYTECYTPYMANADSLYGTGQLPKFAEDLFAARKGGQEGEGENLYLIPTA 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV+LTN EI+ ++ LP++ T P FRSEAGS GRDTRGM+RQHQF K E+V + Sbjct: 238 EVTLTNTVRGEILSAEQLPVKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S+ E M+ A +L++L L YRVVSL TGD+GFSA KTYDLEVWL QN YREISS Sbjct: 298 EKSYEALEEMVKNAGRVLEKLGLPYRVVSLSTGDMGFSAAKTYDLEVWLPAQNTYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C FQ+RRM +R+R+ + + HTLNGSG+AVGR L+A+LEN+ ADGSVTIPT Sbjct: 358 VSNCEAFQARRMQARFRNDKGR-PELVHTLNGSGLAVGRTLVALLENFQQADGSVTIPTA 416 Query: 413 LRPYMNNLAVIKK 425 L+PYM L + Sbjct: 417 LQPYMGGLTRLTP 429 >gi|169632602|ref|YP_001706338.1| seryl-tRNA synthetase [Acinetobacter baumannii SDF] gi|260557291|ref|ZP_05829507.1| seryl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|169151394|emb|CAP00119.1| seryl-tRNA synthetase ; also charges selenocystein tRNA with serine [Acinetobacter baumannii] gi|260409397|gb|EEX02699.1| seryl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] Length = 425 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 190/425 (44%), Positives = 266/425 (62%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 3 MIDPKLLRNNIEVVNAALAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 62 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G N Sbjct: 63 IKKSGG--DASEIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 121 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 181 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 241 FVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 301 LEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY DGS+ IP VLRPYM Sbjct: 361 FQARRMKARYR-MDQKKTELVHTLNGSGLAVGRTLLAVMENYQREDGSIEIPEVLRPYMG 419 Query: 419 NLAVI 423 I Sbjct: 420 GATFI 424 >gi|302344707|ref|YP_003809236.1| seryl-tRNA synthetase [Desulfarculus baarsii DSM 2075] gi|301641320|gb|ADK86642.1| seryl-tRNA synthetase [Desulfarculus baarsii DSM 2075] Length = 426 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 195/425 (45%), Positives = 267/425 (62%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + + ++ +R+ + E LDE+ R ++ ++E +R+ RN SAQ+ + Sbjct: 1 MLDLKFVRENFDLVQRSIAQRNGKVDLETYGRLDERRRQVLPELESLRSTRNDVSAQVAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L + + ++ LE E +V L +L+ IPN+P + P+G Sbjct: 61 LKKAG--EDASGLFEQMKDVGARIKDLEAELAQVEQELGQLMLTIPNLPHQSTPVGKGEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N ++ G+ P H++IG L ++DF+RA +++G+RF+V+ G A LERAL Sbjct: 119 DNPVVSVWGQPPVFDFEPLNHWDIGVNLDIIDFERAVRMAGSRFAVMKGAGARLERALIG 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 M+D HT+ HGYTE+ PL+V A+ GTGQ+PKFA+D F WLIPT+EV LTNL Sbjct: 179 LMLDTHTTAHGYTEILPPLMVNTRALTGTGQLPKFAEDSFKVEGADYWLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E+++ LPL +T P FR+EAGS G+D RG++R HQF K ELV I R EDS+ Sbjct: 239 HMDEVLDGDKLPLCYTAYTPCFRAEAGSHGKDVRGLIRLHQFDKVELVRICRPEDSYENL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AE IL+ L L YR + LCTGDLGFSA KTYDLEVWL GQN YREISSCS C F Sbjct: 299 EVLTGHAEAILRLLGLPYRKIVLCTGDLGFSAAKTYDLEVWLPGQNRYREISSCSNCEAF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R++D K HTLNGSG+AVGR L+AILENY ADGSV IP L PYM Sbjct: 359 QARRAGIRFKDKGRKGTTLAHTLNGSGLAVGRALVAILENYQQADGSVKIPEALLPYMGG 418 Query: 420 LAVIK 424 IK Sbjct: 419 QQTIK 423 >gi|322417644|ref|YP_004196867.1| seryl-tRNA synthetase [Geobacter sp. M18] gi|320124031|gb|ADW11591.1| seryl-tRNA synthetase [Geobacter sp. M18] Length = 422 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 192/424 (45%), Positives = 269/424 (63%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R+N E ++ LK R LD + R L+++ E ++A RN + +I + Sbjct: 1 MLDARYLRENLETVEARLKTRGEGVDIARFRELDGRRRELLQQSETLKALRNKVTEEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S K E + +Q+ +++ V L+ + +PN+P E PIG S Sbjct: 61 LK---DKSQAADRKAEMREVSQQIKGIDESLKSVEEELQGFLLTVPNIPNETTPIGKSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+++R G S + H+EIGE+L ++DF+R KL+GARF++ G A LERAL Sbjct: 118 DNVVVRLEGDIRSYSFEPKPHWEIGESLDILDFERGAKLTGARFTLYKGLGARLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLH EH Y E+ P +V ++M GTGQ+PKF +D+F +LIPT+EV +TN+ Sbjct: 178 FMLDLHIDEHKYIEMLPPFMVNRDSMTGTGQLPKFEEDLFHLEGVDFFLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ LP+ + P FR EAGS G+DTRG++RQHQF K ELV T E+S+ E Sbjct: 238 HRGEILKGSDLPISYCAYTPCFRKEAGSYGKDTRGLIRQHQFNKVELVKFTAPEESYQEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++L AEE+L+RL + YRVV LCTGD+GFSA KT+D+EVWL GQN YREISSCS +F Sbjct: 298 QKLLGHAEEVLRRLQIPYRVVELCTGDIGFSAAKTFDIEVWLPGQNCYREISSCSCFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R+R +F HTLNGSG+AVGR L+A+LENY ADGSV IP VLRPYM Sbjct: 358 QARRAGIRFRPDEKAKPEFVHTLNGSGLAVGRTLVAVLENYQQADGSVLIPEVLRPYMGG 417 Query: 420 LAVI 423 I Sbjct: 418 AERI 421 >gi|257468587|ref|ZP_05632681.1| seryl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|317062844|ref|ZP_07927329.1| seryl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|313688520|gb|EFS25355.1| seryl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] Length = 423 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 270/425 (63%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML++++IR+N E + L R+ LDE+ R ++ ++E ++ +RN+ SA+I + Sbjct: 1 MLELKFIRENRELVKEMLANRNSSIDLAEFDKLDEERRTILGEVELLKQKRNTESAEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + E + Q+ L+ + EV L IPN+ E P+G Sbjct: 61 LKKEKQ--DASQIIEEMGKVSAQIKELDAKLAEVDEKLTYFQMVIPNMYQEGTPVGKDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + H+EIGE LG++DF+R +KL G+RF + G A +ERAL Sbjct: 119 SNVEVRRWGTPREFTFEPKAHWEIGENLGILDFERGSKLGGSRFVLYRGMGARVERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT+EHGYTE P LV+ E GTGQ+PKF DDM+ TTD +LI TSE+++TN++ Sbjct: 179 FMLDMHTTEHGYTEHITPFLVKREICEGTGQLPKFEDDMYRTTDDMFLISTSEITMTNIH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ K LP +T +P FR EAGS G+D +G++R HQF K E+V I +E S+ E E Sbjct: 239 RKEILDEKELPKYYTAYSPCFRREAGSYGKDVKGIIRVHQFNKVEMVKIATQESSYEELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M+ AEE+L+RL+L YRV+ LCTGDLGFSA KTYDLEVWL QN YREISSCS C +FQ Sbjct: 299 KMVVNAEEVLQRLELPYRVIQLCTGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCTDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR S +F HTLNGSG+AVGR +AI+ENY DGS IP L PYM + Sbjct: 359 ARRMGLKYRPNGSSKSEFCHTLNGSGLAVGRTFVAIMENYQQEDGSFLIPKALVPYMGGI 418 Query: 421 AVIKK 425 VIKK Sbjct: 419 DVIKK 423 >gi|302185001|ref|ZP_07261674.1| seryl-tRNA synthetase [Pseudomonas syringae pv. syringae 642] Length = 426 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 272/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VPIG Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDAIQAELDALVLSIPNLPHESVPIGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPAQFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I +DS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|85703424|ref|ZP_01034528.1| seryl-tRNA synthetase [Roseovarius sp. 217] gi|85672352|gb|EAQ27209.1| seryl-tRNA synthetase [Roseovarius sp. 217] Length = 430 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 205/429 (47%), Positives = 274/429 (63%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+ P+ D AL +R L P + IL+LDE R I E +A +N S + G Sbjct: 1 MHDIRAIRETPDAFDAALARRGLAPVTPEILALDEARRTRIHAAETAQAEQNRASKEAGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ + + L+ + K ++ ++ E + L + +PN+P ++VP GT + Sbjct: 61 AKGRGDEAEFERLRALVADKKAEMAAMQAEAKALDMQLTDHLMALPNLPFDDVPDGTDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G +EH+EI MDF+ A KLSGARF VL+G +A L RAL Q Sbjct: 121 GNVELRRWGTPAIFDFQPKEHYEITGVQPGMDFETAAKLSGARFVVLSGSIARLHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G E P+LVR E M GTGQ+PKF +D + TT+G WL+PT+EV+LTN+ Sbjct: 181 FMLDTHIEENGLQETWTPVLVRPEMMLGTGQLPKFGEDSYETTNGWWLVPTAEVTLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 E +E+ +LP R+ FRSEAGSAGRDT GMLRQHQF K E+VSIT ++S E + Sbjct: 241 HGETVEAATLPRRYVAHTQCFRSEAGSAGRDTAGMLRQHQFEKVEMVSITHPDESRAELD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE IL+RL L YR + LCTGD+GF A +T+D+EVWL GQN YREISS S CG+FQ Sbjct: 301 RMTGCAEGILERLGLPYRTIVLCTGDMGFGARRTHDIEVWLPGQNTYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ +F HTLNGSG+AVGRCLIA+LEN ADGSV IP L PY+ Sbjct: 361 ARRMNARFKPQGGGKPEFLHTLNGSGLAVGRCLIAVLENGQQADGSVRIPDALHPYLRGK 420 Query: 421 AVIKKEHIL 429 ++ + L Sbjct: 421 TILNADGSL 429 >gi|157369929|ref|YP_001477918.1| seryl-tRNA synthetase [Serratia proteamaculans 568] gi|166987317|sp|A8GCF0|SYS_SERP5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157321693|gb|ABV40790.1| seryl-tRNA synthetase [Serratia proteamaculans 568] Length = 430 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 190/431 (44%), Positives = 267/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + + L +R + + + S +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRNELDAVAVKLARRGFKLDLDLLRSQEERRKVLQVETETLQAERNSRSKSIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L ++L + ++ + ++ IPN+P +EVP G + Sbjct: 61 AKARG--EDIEPLRREVNELGDKLDTAKAALDQLQAEIRDYALAIPNLPDDEVPDGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ R+H ++GE G +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNLEVSRWGEPRQYDFAVRDHVDLGEMAGGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV ++GTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYQETYVPYLVNHATLFGTGQLPKFGEDLFHTKPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLPL+ T P FR+EAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEILEEESLPLKMTAHTPCFRAEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS T E + AE++L+ L+L YR + LCTGD+G +CKTYDLEVWL Q+ YREISS Sbjct: 299 EDSMTTLEELTGHAEKVLQLLNLPYRKMLLCTGDMGAGSCKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS ++Q+RRM +R R K + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDYQARRMQARCRSKTEKKPRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLEYI 429 >gi|66046404|ref|YP_236245.1| seryl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a] gi|289679158|ref|ZP_06500048.1| seryl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] gi|81308101|sp|Q4ZRL5|SYS_PSEU2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|63257111|gb|AAY38207.1| Seryl-tRNA synthetase, class IIa [Pseudomonas syringae pv. syringae B728a] gi|330900602|gb|EGH32021.1| seryl-tRNA synthetase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940282|gb|EGH43412.1| seryl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B] gi|330981394|gb|EGH79497.1| seryl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 426 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 273/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDGIQAELDALVLSIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G S ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTSFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I +DS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|257065307|ref|YP_003144979.1| seryl-tRNA synthetase [Slackia heliotrinireducens DSM 20476] gi|256792960|gb|ACV23630.1| seryl-tRNA synthetase [Slackia heliotrinireducens DSM 20476] Length = 428 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 196/429 (45%), Positives = 274/429 (63%), Gaps = 2/429 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R+N + + A+K R+ + LDE R I E ++A+RN+ S QIG Sbjct: 1 MLDIKFVRENQDVITQAMKNRNGSWDVDKFNELDESRRSYIADEEAMQAKRNTASKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + EG +A K E L E++ + + E ++L +++ IPN+P E P+G Sbjct: 61 LMREGKADEAEASKEEVRALNEKIAEVSAKRSEAETALNEMLCRIPNIPHESTPVGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G + H+++G L ++D +RATKL+G+RF +L G A LERAL Sbjct: 121 ENPEVRRWGTPRKFDFEFKAHWDLGADLNIIDSERATKLAGSRFVLLGGLGARLERALIN 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM D H GY E P++ +YGTGQ+PKF +D+F TT+G +LIPT+EV LTN++ Sbjct: 181 FMADTH-GSRGYKEWWCPVMANGNTLYGTGQLPKFEEDLFHTTEGLYLIPTAEVQLTNIH 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +++E+ LPL++ FR EAGSAGRDTRG++R HQF K E+V ED F + E Sbjct: 240 AGDVLEASQLPLKYCGYTACFREEAGSAGRDTRGLIRVHQFDKVEMVKFATPEDGFNQLE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 M+ AE IL+ L L YRV+SLCTGDLGFSA KTYDLEVWL + Y+EISSCS C +FQ Sbjct: 300 LMVEDAENILQLLGLPYRVISLCTGDLGFSAAKTYDLEVWLPSYDAYKEISSCSCCTDFQ 359 Query: 361 SRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 +RR N RYRDPN K ++ +TLNGSG+AVGR + A++ENY ADGS+ +P VL PYM Sbjct: 360 ARRANIRYRDPNKFKGTRYVYTLNGSGLAVGRTMAAVMENYQQADGSIKVPDVLVPYMGG 419 Query: 420 LAVIKKEHI 428 + VI + + Sbjct: 420 VEVIAADQL 428 >gi|238789329|ref|ZP_04633116.1| Seryl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] gi|238722661|gb|EEQ14314.1| Seryl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] Length = 430 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 266/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + E + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGFKLDVEMLRQQEERRKVLQVETESLQAERNSRSKMIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNVLGEKLDAAKAELDKLQNEIRDLALSIPNLPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ R+H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGEPRKYDFEVRDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYLETYVPYLVNHATLYGTGQLPKFGGDLFHTKPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI+E +SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPVTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL QN YREISS Sbjct: 299 EDSMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R+ + + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRNKTDRKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLEFI 429 >gi|126725452|ref|ZP_01741294.1| seryl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] gi|126704656|gb|EBA03747.1| seryl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] Length = 430 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 207/429 (48%), Positives = 278/429 (64%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP D L +R P S IL++DE R I+ E A RN+ S Q+G Sbjct: 1 MHDIRAIRANPAEFDQQLARRGKSPMSADILAIDEARRAKIQAAETALADRNAASKQVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ S K+++ L+ + L L+ I N+P ++VP+G+ + Sbjct: 61 AKAKGDEAEFERLRALVSAKKDEIAELDAASKAEDARLNDLLMSIDNIPFDDVPVGSDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ I G+ P EHFEIG MDF+ A K+SG+RF +++G +A + RAL Q Sbjct: 121 ANVEINRNGEPPRMNFTPVEHFEIGGVKSGMDFETAGKISGSRFVIMSGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D HT+E+ TEV+ P+LVR EAM GTGQ+PKFA+D + TT+G WLIPTSEV+LTN+ Sbjct: 181 FMLDTHTTENDLTEVNTPVLVRTEAMTGTGQLPKFAEDSYQTTNGWWLIPTSEVTLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S +E LP R+ + FRSEAGSAGRDT GMLRQHQF K E+VS+T ++S E + Sbjct: 241 SGLTVEESYLPRRYVAHSLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSVTHPDNSRAELD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE IL+ L L YR V LCTGD+GF A +T+D+EVWL GQ+ YREISS S CG+FQ Sbjct: 301 RMTRCAEGILEALGLAYRTVVLCTGDMGFGARRTHDIEVWLPGQDTYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ +F HTLNGSG+AVGRCLIA+LEN DGSV +P L ++ Sbjct: 361 ARRMNARFKPSEGGKPEFVHTLNGSGLAVGRCLIAVLENGQQEDGSVKLPAALHGHLGGK 420 Query: 421 AVIKKEHIL 429 + E L Sbjct: 421 TTLTPEGTL 429 >gi|113866791|ref|YP_725280.1| seryl-tRNA synthetase [Ralstonia eutropha H16] gi|123329502|sp|Q0KDK9|SYS_RALEH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|113525567|emb|CAJ91912.1| Seryl-tRNA synthetase [Ralstonia eutropha H16] Length = 434 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 197/437 (45%), Positives = 269/437 (61%), Gaps = 15/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ R++ + + L R + +L+ + + L + E+++ARRNS S QIG Sbjct: 1 MLDIQLFRKDIDAVAQRLATRGYQLDVAAFQALEAERKQLQTQTEELQARRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + L E+ + L +L+ IPN+P E VP+G Sbjct: 61 LKGKG--EDASAVMAEVGGIGDTLKASAARLDEIQAHLAELMLAIPNLPHESVPVGNDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG+ R+H ++G+ LG +DFD A K++G+RFS+L G LA + RAL Q Sbjct: 119 QNVEVRRVGEPRQFDFAVRDHVDVGDKLG-LDFDTAVKVTGSRFSMLRGGLARMNRALVQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWLI 229 M+D HT EHGYTE+ P +V +M GTGQ+PKF +D+F +LI Sbjct: 178 LMLDTHTQEHGYTEMYVPYMVNAASMRGTGQLPKFEEDLFKVPRKVGSEDGERIENFYLI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN+ I+ + LPLRF P FRSEAGS G+DTRGM+RQHQF K ELV + Sbjct: 238 PTAEVPLTNIVRDAIVAGEKLPLRFVAHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQV 297 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 SF E++ AE ILK+L+L +R + LCTGD+GF + KTYDLEVW+ QN YRE Sbjct: 298 VPAAQSFEALEQLTGHAEAILKKLELPFRTIVLCTGDMGFGSTKTYDLEVWIPAQNTYRE 357 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS G+FQ+RRM +R R K + HTLNGSG+AVGR L+AILENY NADGSVT+ Sbjct: 358 ISSCSNMGDFQARRMQARMRAGQGK-PELVHTLNGSGLAVGRTLVAILENYQNADGSVTV 416 Query: 410 PTVLRPYMNNLAVIKKE 426 P L+PYM + ++ E Sbjct: 417 PAALQPYMGGITRLEPE 433 >gi|312961665|ref|ZP_07776163.1| Seryl-tRNA synthetase [Pseudomonas fluorescens WH6] gi|311283924|gb|EFQ62507.1| Seryl-tRNA synthetase [Pseudomonas fluorescens WH6] Length = 426 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 194/428 (45%), Positives = 278/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R N + + L R I +L+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEALQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E ++ S L ++ IPN+P E VPIG + Sbjct: 61 AKQRG--EDIAPLMADVERMGTELSDGKVELDKIQSELDSILLGIPNIPHESVPIGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A K+SGARF++L G +A + RAL Q Sbjct: 119 GNVEVRRWGTPKAFDFEIKDHVALGELTGGLDFETAAKMSGARFALLRGPIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSL 236 FMI+LHT+EHGY E P LV+ A+ GT Q+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHTAEHGYEEAYTPYLVQAPALVGTSQLPKFEEDLFKISRDGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ + EI+++K LP++F +P FRSEAG++GRDTRGM+RQHQF K E+V + S Sbjct: 239 TNIVAGEILDAKQLPIKFVAHSPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSTSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV+SLCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 QALEGLTANAERVLQLLELPYRVLSLCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVIK 424 M + VI+ Sbjct: 419 MAGVEVIR 426 >gi|299768961|ref|YP_003730987.1| seryl-tRNA synthetase [Acinetobacter sp. DR1] gi|298699049|gb|ADI89614.1| seryl-tRNA synthetase [Acinetobacter sp. DR1] Length = 423 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 190/425 (44%), Positives = 268/425 (63%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 1 MIDPKLLRNNIEAVNAALAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G + Sbjct: 61 IKKSGG--DASEIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 119 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGSLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII+++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 239 FVRDEIIDTERLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 299 LEDLTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY DGS+ IP VLRPYM Sbjct: 359 FQARRMKARYR-MDQKKTELVHTLNGSGLAVGRTLLAVMENYQREDGSIEIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTFI 422 >gi|320323766|gb|EFW79850.1| seryl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076] gi|320327907|gb|EFW83912.1| seryl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 426 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 273/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDGIQAELDALVLSIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DFD A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTAFDFEVKDHVALGEKFGWLDFDTAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F T +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKITREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I EDS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPEDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|213970055|ref|ZP_03398187.1| seryl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|301381411|ref|ZP_07229829.1| seryl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13] gi|302058409|ref|ZP_07249950.1| seryl-tRNA synthetase [Pseudomonas syringae pv. tomato K40] gi|302130342|ref|ZP_07256332.1| seryl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925159|gb|EEB58722.1| seryl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] Length = 426 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 273/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDAIQAELDALVLSIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTAFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I +DS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|194018062|ref|ZP_03056667.1| seryl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194010254|gb|EDW19831.1| seryl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 424 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 190/426 (44%), Positives = 272/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R + + + L R + + LD+K R LI K E +++RRN S Q+ Sbjct: 1 MLDIKQLRTDFDQIKEKLAHRGEDLADFDKFGELDQKRRELIGKTEVLKSRRNEVSQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D + E + +++ L+ E V SL+ ++ IPN+P + VP+G + Sbjct: 61 VLKREKK--DADHIIQEMREVGDEIKKLDDELRTVEESLQHILFSIPNIPHDTVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G++P+ + H+++ + L ++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVEVRKWGEQPAFSFEPKPHWDVADELNILDFERAGKVTGSRFVFYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH E G+TEV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMLDLHVDEFGFTEVLPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+E + LP+ + + FRSEAGSAGRDTRG++RQHQF K ELV R EDS+ E Sbjct: 239 MHRDEILEGEQLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVRPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE++L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ Q+ YREISSCS Sbjct: 299 LEKLTNQAEKVLQLLNLPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+AVGR + AILENY DG+V IP VLRPYM Sbjct: 359 FQARRANIRFRPEPKAKPEHVHTLNGSGLAVGRTVAAILENYQQEDGTVIIPEVLRPYMG 418 Query: 419 NLAVIK 424 N VIK Sbjct: 419 NKEVIK 424 >gi|327475192|gb|AEA77191.1| seryl-tRNA synthetase [Bacillus sp. 15.4] Length = 426 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 190/428 (44%), Positives = 272/428 (63%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + E LD + R L+ + E+++++RN S +I Sbjct: 1 MLDIRYLRANFEDVKNRLQDRGEDLSDFEKFEELDVRRRELLVETENLKSKRNEVSQRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + D L E + ++ L++E EV L +L+ IPN+P E VP+G++ Sbjct: 61 EMKKEKQNA--DDLILEMREVGSEIKKLDEELKEVEGKLDRLMLSIPNIPHESVPVGSTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ R G P+ + H+++ G++DF+RA+K++G+RF G A LERAL Sbjct: 119 DDNVEARKWGAVPTFDFEPKPHWDLATDSGILDFERASKVTGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+DLH EHGY E+ P +V E+M GTGQ+PKF +D F + +L+PT+EV +TN Sbjct: 179 NFMMDLHMDEHGYEEMLPPYIVNRESMTGTGQLPKFEEDAFLIESEDYYLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ + LP+ +T + FRSEAGSAGRDTRG++RQHQF K ELV R EDS+TE Sbjct: 239 YHRDEILTNDQLPIAYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVRPEDSYTE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE++L+ L+L YRV+S+CT DLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEKLTGHAEKVLQLLNLPYRVMSMCTADLGFTAAKKYDIEVWIPSYRTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+A+GR + AILENY DGS+ IP VLRPYM Sbjct: 359 FQARRANIRFRREPGAKPEHVHTLNGSGLALGRTVAAILENYQQEDGSIIIPEVLRPYMR 418 Query: 419 NLAVIKKE 426 VIK + Sbjct: 419 GAEVIKPK 426 >gi|319896555|ref|YP_004134748.1| seryl-tRNA synthetase [Haemophilus influenzae F3031] gi|317432057|emb|CBY80406.1| Seryl-tRNA synthetase [Haemophilus influenzae F3031] Length = 429 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 192/431 (44%), Positives = 262/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARGK--DIAPLLAEMDDIGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +G+ +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHVTLGKEANGLDFAAGAKLTGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALQGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLDVIGK 429 >gi|261821270|ref|YP_003259376.1| seryl-tRNA synthetase [Pectobacterium wasabiae WPP163] gi|261605283|gb|ACX87769.1| seryl-tRNA synthetase [Pectobacterium wasabiae WPP163] Length = 431 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 198/432 (45%), Positives = 265/432 (61%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIAL-KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R + + L +R + E + +E+ ++L + E+++A RNS S +IG Sbjct: 1 MLDPNLLRNELDAVAEKLLARRGFKLDVETLRKQEERRKVLQVETENLQAVRNSRSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G ++ L+ E +TL E+L + E ++ + ++ L IPN+P + VP+G Sbjct: 61 AAKARG--EDIEPLRREVNTLGEELDAAKAELDQLQNEIRDLALTIPNLPDDSVPLGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N + G+ R+H E+GE +DF A KL+GARF V+ G +A L RAL Sbjct: 119 TQNQEVARWGEPRKYDFPVRDHVELGEMAAGLDFAAAVKLTGARFVVMKGQIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPT 231 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT Sbjct: 179 QFMLDLHTQQHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTNPLSEEADSSQYALIPT 238 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV LTNL EI++ +SLPL+ T P FRSEAGS GRDTRG++R HQF K ELV I R Sbjct: 239 AEVPLTNLVRDEILDEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVR 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS E + + AE +L+ L L YR V LCTGD+GF + KTYDLEVWL Q+ YREIS Sbjct: 299 PEDSMQALEELTTHAETVLQLLKLPYRKVLLCTGDMGFGSTKTYDLEVWLPAQDTYREIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A+LENY ADG + IP Sbjct: 359 SCSNMWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEIPE 418 Query: 412 VLRPYMNNLAVI 423 LRPYM L I Sbjct: 419 ALRPYMGGLEFI 430 >gi|238022770|ref|ZP_04603196.1| hypothetical protein GCWU000324_02681 [Kingella oralis ATCC 51147] gi|237865973|gb|EEP67109.1| hypothetical protein GCWU000324_02681 [Kingella oralis ATCC 51147] Length = 430 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 199/432 (46%), Positives = 285/432 (65%), Gaps = 9/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + L R E L+ + ++L + E+ +A+ N+ S QIG+ Sbjct: 1 MLDIQLLRNDLAGVAARLATRGFELDIAAFEQLENQRKVLQVQNEEAQAKVNTLSKQIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +G +A+K E + +K L ++ + ++L L+ IPN+P VP+G Sbjct: 61 LMKQGKREEAEAVKAEVAQVKALQEQLNQDLPRIQAALDDLLLRIPNLPHSSVPVGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG + ++H ++G ALG +DF++A +LSGARFS++ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPKTFDFEVKDHVDLGAALG-LDFEKAAELSGARFSLMKGKVARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D A+ GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTQQHGYTECYTPYIVSDAALLGTGQLPKFAEDLFHVTRGGDESKLSQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN+ I+ K LPL+FT +P FRSEAGS G+DTRG++RQHQF K E+V + + E Sbjct: 240 VTLTNIVRDTIVAEKDLPLKFTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVEMVQVVQPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S+ E M+S AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 NSYAALEEMVSHAENILKLLELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++ + K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKGEDGKN-RLLHTLNGSGLAVGRTLVAVLENHQNADGSINIPQAL 418 Query: 414 RPYMNNLAVIKK 425 RPY+ L ++ Sbjct: 419 RPYLGGLEKLEP 430 >gi|83746913|ref|ZP_00943960.1| Seryl-tRNA synthetase [Ralstonia solanacearum UW551] gi|207723628|ref|YP_002254026.1| seryl-trna synthetase protein [Ralstonia solanacearum MolK2] gi|300703435|ref|YP_003745037.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Ralstonia solanacearum CFBP2957] gi|83726498|gb|EAP73629.1| Seryl-tRNA synthetase [Ralstonia solanacearum UW551] gi|206588831|emb|CAQ35793.1| seryl-trna synthetase protein [Ralstonia solanacearum MolK2] gi|299071098|emb|CBJ42409.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Ralstonia solanacearum CFBP2957] Length = 438 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 198/440 (45%), Positives = 272/440 (61%), Gaps = 19/440 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R E +L+ + + + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDIDAVAARLNDRGYELDVAGFAALEAERKAIQTRTEELQARRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E S + ++L + V + L+ L+ +PNVP E VP G Sbjct: 61 LKGKG--EDASAVMAEVSGIGDELKASAAQLDVVQTRLQDLLLSMPNVPHESVPAGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H ++G LG +DFD A KLSG+RF+VL G +A L RAL Q Sbjct: 119 QNVEVRREGTPRAFDFAVKDHVDLGAGLG-LDFDVAAKLSGSRFAVLKGPVARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------------G 225 FM+D HT EHGYTE P +V +M GTGQ+PKF +D+F Sbjct: 178 FMLDTHTQEHGYTETYVPYIVNAASMRGTGQLPKFEEDLFRVPRKMGQAAEGEAGEHVEN 237 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPT+EV LTNL EI+ +LP++F +P FRSEAGS G+DTRGM+RQHQF K E Sbjct: 238 FYLIPTAEVPLTNLVRDEIVSGDALPMKFAAHSPCFRSEAGSYGKDTRGMIRQHQFDKVE 297 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I + SF + M AE IL++L+L +R V LCTGD+GF + KTYD+EVW+ QN Sbjct: 298 MVQIVHPDTSFEALDTMTHHAENILRKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQN 357 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISSCS G+FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADG Sbjct: 358 TYREISSCSNMGDFQARRMQARFRNAQGK-PELLHTLNGSGLAVGRTLVAVLENYQNADG 416 Query: 406 SVTIPTVLRPYMNNLAVIKK 425 SVT+P LRPY+ V+K Sbjct: 417 SVTVPAALRPYLGGQDVLKP 436 >gi|169794926|ref|YP_001712719.1| seryl-tRNA synthetase [Acinetobacter baumannii AYE] gi|169147853|emb|CAM85716.1| seryl-tRNA synthetase ; also charges selenocystein tRNA with serine [Acinetobacter baumannii AYE] Length = 425 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 189/425 (44%), Positives = 265/425 (62%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ L KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 3 MIDPKLLRNNIEVVNAGLAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 62 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G N Sbjct: 63 IKKSGG--DASEIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 121 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 181 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 241 FVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 301 LEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY DGS+ IP VLRPYM Sbjct: 361 FQARRMKARYR-MDQKKTELVHTLNGSGLAVGRTLLAVMENYQREDGSIEIPEVLRPYMG 419 Query: 419 NLAVI 423 I Sbjct: 420 GATFI 424 >gi|251794129|ref|YP_003008860.1| seryl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247541755|gb|ACS98773.1| seryl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 427 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 189/428 (44%), Positives = 278/428 (64%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++W+R E ++ ALK R LD K R L+ + ++++ RRN+ S ++ Sbjct: 1 MLDVKWLRNEYEQVEKALKNRSASLDLISGFPELDVKRRALLVETDNLKTRRNTVSQEVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + G +AL E + +++ L++E V + +++L+ IPN+P E VP+G+S Sbjct: 61 KLKKSGG--DAEALIIEMREVGDRIKELDEEIRTVEAQVEELMLAIPNLPHESVPVGSSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G++ + + H+++ + LG++DF+RA K++G+RF+ G A LERAL Sbjct: 119 EDNVEIRRNGEQTTFDFEPKAHWDLAQDLGILDFERAGKVTGSRFTFYRGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH+ +HGY EV P LV +++ GTGQ+PKF +D+F +D + IPT+EV +TN Sbjct: 179 SFMMDLHSDQHGYEEVLPPYLVNRDSLIGTGQLPKFEEDLFKISDSDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ + LP F + FRSEAG+AGRDTRG++RQHQF K EL+ + + E+S+ E Sbjct: 239 LHREEILSIEELPKHFVAYSSCFRSEAGAAGRDTRGLIRQHQFNKVELIKLAKPEESYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE++L+ L L YRV++LCTGD+GF+A KTYDLEVWL YREISSCS + Sbjct: 299 LEKMTANAEKVLQLLGLPYRVLALCTGDMGFTAAKTYDLEVWLPSAGTYREISSCSNVED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R+R +F HTLNGSG+AVGR AILENY ADG++ +P VLRPYM Sbjct: 359 FQARRAGIRFRRDAKSKPEFVHTLNGSGLAVGRTFAAILENYQQADGTIVVPEVLRPYMG 418 Query: 419 NLAVIKKE 426 L I Sbjct: 419 GLEKISPR 426 >gi|184159299|ref|YP_001847638.1| seryl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|332872559|ref|ZP_08440528.1| serine--tRNA ligase [Acinetobacter baumannii 6014059] gi|238690993|sp|B2HXU5|SYS_ACIBC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|183210893|gb|ACC58291.1| Seryl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|322509210|gb|ADX04664.1| seryl-tRNA synthetase [Acinetobacter baumannii 1656-2] gi|323519239|gb|ADX93620.1| seryl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715] gi|332739245|gb|EGJ70103.1| serine--tRNA ligase [Acinetobacter baumannii 6014059] Length = 423 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 190/425 (44%), Positives = 266/425 (62%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 1 MIDPKLLRNNIEVVNAALAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G N Sbjct: 61 IKKSGG--DASEIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 119 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 239 FVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 299 LEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY DGS+ IP VLRPYM Sbjct: 359 FQARRMKARYR-MDQKKTELVHTLNGSGLAVGRTLLAVMENYQRKDGSIEIPEVLRPYMG 417 Query: 419 NLAVI 423 I Sbjct: 418 GATFI 422 >gi|152980660|ref|YP_001352847.1| seryl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|166222735|sp|A6SX50|SYS_JANMA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|151280737|gb|ABR89147.1| Seryl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 431 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 197/434 (45%), Positives = 271/434 (62%), Gaps = 12/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DIQ +R++ + + L R + +L+ + + + ED++ +RN+ S QIG Sbjct: 1 MIDIQLLRKDIDSVAARLAGRKFKLDVAAFNALEAERKQIQSSTEDLQNKRNTLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + ++L V + + + + IPN+P E VP+GT Sbjct: 61 LKGKG--EDTSAVMAEVAGIGDELKASAARLDIVQAKISEFMLSIPNLPHESVPVGTDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R VG S R+H ++G ALG +DFD A K++G+RFSV+ G +A L RAL Q Sbjct: 119 GNVELRKVGTPRSFDFEIRDHVDVGAALG-LDFDVAAKITGSRFSVMKGGIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------DGRWLIPTS 232 FM+D HT+EHGYTE P +V +++ GTGQ+PKF D+F + +LIPT+ Sbjct: 178 FMLDTHTAEHGYTECYTPYIVNADSLQGTGQLPKFEADLFAVKKGGQEGEGEALYLIPTA 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTN+ EI+ +LP+R T +P FRSEAGS GRDTRGM+RQHQF K E+V + Sbjct: 238 EVPLTNIVRDEIVAGDALPIRMTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S+ + M AE ILK+L L YRV++LCTGD+GF A KTYDLEVWL QN YREISS Sbjct: 298 EKSYEALDEMCGHAENILKKLGLPYRVITLCTGDMGFGATKTYDLEVWLPAQNTYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY ADGSVTIP V Sbjct: 358 VSNCEAFQARRMQARFRNAQGK-PESVHTLNGSGLAVGRTLVAVLENYQQADGSVTIPEV 416 Query: 413 LRPYMNNLAVIKKE 426 L PYM L + + Sbjct: 417 LHPYMGGLQRLTPQ 430 >gi|325123239|gb|ADY82762.1| seryl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 423 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 189/425 (44%), Positives = 267/425 (62%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 1 MIDPKLLRNNIEAVNAALAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G + Sbjct: 61 IKKSGG--DASEIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 119 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGSLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII+++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 239 FVRDEIIDTERLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 299 LEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY DGS+ IP VLRPYM Sbjct: 359 FQARRMKARYR-MDQKKTELVHTLNGSGLAVGRTLLAVMENYQREDGSIEIPEVLRPYMG 417 Query: 419 NLAVI 423 I Sbjct: 418 GATFI 422 >gi|123441840|ref|YP_001005823.1| seryl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332162217|ref|YP_004298794.1| seryl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166223310|sp|A1JMG0|SYS_YERE8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|122088801|emb|CAL11607.1| seryl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318606280|emb|CBY27778.1| seryl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica Y11] gi|325666447|gb|ADZ43091.1| seryl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 430 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 196/431 (45%), Positives = 266/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + E + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGFKLDVEMLRQQEERRKVLQVETESLQAERNSRSKLIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNELGEKLDAAKAELDKLQNEIRDLALSIPNLPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ R+H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNLEVSRWGEPRQYDFEVRDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYLETYVPYLVNHATLYGTGQLPKFGGDLFHTKPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI+E +SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPVTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L+L YR + LCTGD+GF + KTYDLEVWL QN YREISS Sbjct: 299 EDSMAALEELTGHAEKVLQLLELPYRKMLLCTGDMGFGSSKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R+ + + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRNKTDRKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLEFI 429 >gi|329123881|ref|ZP_08252435.1| serine--tRNA ligase [Haemophilus aegyptius ATCC 11116] gi|327468488|gb|EGF13969.1| serine--tRNA ligase [Haemophilus aegyptius ATCC 11116] Length = 429 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 192/431 (44%), Positives = 262/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARGK--DIAPLLAEMDDIGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +G+ +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHVTLGKEANGLDFAAGAKLTGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLDVIGK 429 >gi|229591232|ref|YP_002873351.1| seryl-tRNA synthetase [Pseudomonas fluorescens SBW25] gi|259511678|sp|C3JY54|SYS_PSEFS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|229363098|emb|CAY50099.1| serine tRNA synthetase [Pseudomonas fluorescens SBW25] Length = 426 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 278/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R N + + L R I +L+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEALQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E ++ S L ++ IPN+P E VPIG + Sbjct: 61 AKQRG--EDIAPLMADVERMGTELSDGKVELEKIQSELDSILLGIPNLPHESVPIGEDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A K+SGARF++L G +A + RAL Q Sbjct: 119 GNVEVRRWGTPTAFDFEIKDHVALGELTGGLDFETAAKMSGARFALLRGPIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSL 236 FMI+LHT+EHGY E P LV+ A+ GT Q+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHTAEHGYEEAYTPYLVQAPALMGTSQLPKFEEDLFKISRDGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F +P FRSEAG++GRDTRGM+RQHQF K E+V + S Sbjct: 239 TNIVSGEILDAKQLPLKFVAHSPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSTSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAERVLQLLELPYRVLALCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVIK 424 M + VI+ Sbjct: 419 MAGVEVIR 426 >gi|301168770|emb|CBW28361.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Haemophilus influenzae 10810] Length = 429 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 193/431 (44%), Positives = 262/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILCWGTPRTFDFEVKDHVTLGEEANGLDFAAGAKLTGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALQGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLDVIGK 429 >gi|260548984|ref|ZP_05823206.1| seryl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260408152|gb|EEX01623.1| seryl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 423 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 188/425 (44%), Positives = 266/425 (62%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 1 MIDPKLLRNNIEVVNAALAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G + Sbjct: 61 IKKSGG--DASKIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 119 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 239 FVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 299 LEELTAHAEGILQALGLPYRKILLCGGDMGFGAMKTYDLEVWVPSQNTYREISSCSNMGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R + K + HTLNGSG+AVGR L+A++ENY DGS+ IP VLRPYM Sbjct: 359 FQARRMKARFR-MDQKKTELVHTLNGSGLAVGRTLLAVMENYQREDGSIEIPEVLRPYMG 417 Query: 419 NLAVI 423 I Sbjct: 418 GATFI 422 >gi|167825379|ref|ZP_02456850.1| seryl-tRNA synthetase [Burkholderia pseudomallei 9] gi|167895446|ref|ZP_02482848.1| seryl-tRNA synthetase [Burkholderia pseudomallei 7894] gi|167920072|ref|ZP_02507163.1| seryl-tRNA synthetase [Burkholderia pseudomallei BCC215] gi|226193869|ref|ZP_03789471.1| serine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|225934174|gb|EEH30159.1| serine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] Length = 433 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 200/430 (46%), Positives = 274/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYPLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + E+ + L +L+ +PNVP E VP+G Sbjct: 61 MK--GRSEDTSAVMAEVGGIGDEMKASAVKLDEIQARLSELMLEMPNVPHESVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF+VL G +A L RAL Q Sbjct: 119 ENVEVRRWGAPRQFDFDVKDHVDVGTPLG-LDFETGAKLSGARFTVLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V + +YGTGQ+PKFA+DMF ++LI TSE Sbjct: 178 FMLDTHTQQHGYSETYTPYIVNPDVLYGTGQLPKFAEDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E+ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSIVEASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L+L YRVV+LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLELPYRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPVAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGVERI 426 >gi|300690798|ref|YP_003751793.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Ralstonia solanacearum PSI07] gi|299077858|emb|CBJ50496.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Ralstonia solanacearum PSI07] Length = 438 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 199/440 (45%), Positives = 272/440 (61%), Gaps = 19/440 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R + +L+ + + + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDIDAVAARLNDRGYDLDVAGFAALEAERKAIQTRTEELQARRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E S + ++L + V + L+ L+ IPNVP E VP G Sbjct: 61 LKGKG--EDASAVMAEVSGIGDELKASAAQLDVVQAKLQDLLLSIPNVPHESVPAGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G + ++H ++G ALG +DFD KLSG+RF+VL G +A L RAL Q Sbjct: 119 QNAEVRREGTPRTFDFPVKDHVDLGAALG-LDFDAGAKLSGSRFTVLKGQVARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------------G 225 FM+D HT EHGYTE P +V +M GTGQ+PKF +D+F Sbjct: 178 FMLDTHTQEHGYTEAYVPYIVNAASMRGTGQLPKFEEDLFRVPRKMGQTTESETGEHVEN 237 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPT+EV LTNL EI+ +LP++F +P FRSEAGS G+DTRGM+RQHQF K E Sbjct: 238 FYLIPTAEVPLTNLVRDEIVLGDALPMKFAAHSPCFRSEAGSYGKDTRGMIRQHQFDKVE 297 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I + SF + M AE IL++L+L +R V LCTGD+GF + KTYD+EVW+ QN Sbjct: 298 MVQIVHPDTSFDALDTMTHHAENILRKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQN 357 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISSCS G+FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADG Sbjct: 358 TYREISSCSNMGDFQARRMQARFRNAQGK-PELLHTLNGSGLAVGRTLVAVLENYQNADG 416 Query: 406 SVTIPTVLRPYMNNLAVIKK 425 SVT+P VLRPY+ V+K Sbjct: 417 SVTVPAVLRPYLGGQDVLKP 436 >gi|126440240|ref|YP_001059999.1| seryl-tRNA synthetase [Burkholderia pseudomallei 668] gi|167903832|ref|ZP_02491037.1| seryl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] gi|254298870|ref|ZP_04966320.1| seryl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|166201240|sp|A3NCC8|SYS_BURP6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|126219733|gb|ABN83239.1| serine--tRNA ligase [Burkholderia pseudomallei 668] gi|157808968|gb|EDO86138.1| seryl-tRNA synthetase [Burkholderia pseudomallei 406e] Length = 433 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 201/430 (46%), Positives = 274/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYPLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + E+ + L +L+ +PNVP E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKASAVKLDEIQARLSELMLEMPNVPHESVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF+VL G +A L RAL Q Sbjct: 119 ENVEVRRWGAPRQFDFDVKDHVDVGTPLG-LDFETGAKLSGARFTVLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V + +YGTGQ+PKFA+DMF ++LI TSE Sbjct: 178 FMLDTHTQQHGYSETYTPYIVNPDVLYGTGQLPKFAEDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN IIE+ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSIIEASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L+L YRVV+LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLELPYRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPVAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGVERI 426 >gi|238753493|ref|ZP_04614856.1| Seryl-tRNA synthetase [Yersinia ruckeri ATCC 29473] gi|238708446|gb|EEQ00801.1| Seryl-tRNA synthetase [Yersinia ruckeri ATCC 29473] Length = 431 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 193/431 (44%), Positives = 259/431 (60%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + + + + + + ++L + E ++A RNS S IG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGFKLDVDTLRAQEARRKVLQTETESLQAERNSRSKMIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E +TL ++L + E + + ++ L IPN+P + VPIG N Sbjct: 61 AKARG--EDIEPLRLEVNTLGDKLDAAKAELETLQNEIRDLALSIPNLPDDSVPIGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ R+H +GE +DF KL+GARF V+ G +A + RAL Q Sbjct: 119 DNLEVSRWGQPQQYDFDVRDHVSLGEMAAGLDFAAGVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYLETYVPYLVNHATLYGTGQLPKFGGDLFHTKPLDEESASSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI+E +SLPL+ T P FRSEAGS GRDTRG++R HQF K ELV I R Sbjct: 239 EVPVTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L L YR + LCTGD+GF + KTYDLEVWL QN YREISS Sbjct: 299 EDSTEALEELTGHAEKVLQLLGLPYRKMLLCTGDMGFGSRKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQSRRM +R R + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQSRRMQARCRSKTDNKPRLVHTLNGSGLAVGRTLVAVLENYQQADGRIKVPEV 418 Query: 413 LRPYMNNLAVI 423 LR YM L I Sbjct: 419 LRSYMGGLEFI 429 >gi|269214206|ref|ZP_05986067.2| serine--tRNA ligase [Neisseria lactamica ATCC 23970] gi|269210393|gb|EEZ76848.1| serine--tRNA ligase [Neisseria lactamica ATCC 23970] Length = 441 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 202/433 (46%), Positives = 276/433 (63%), Gaps = 9/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 11 MLDIQSLRSNTAAVAERLAARGYEFDAARFNALEEQRKAVQVKTEELQASRNSISKQIGA 70 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L +S IPN+P + VP G Sbjct: 71 LKGQGRHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLSGIPNLPHKSVPAGKDET 130 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 131 ENVEVRRVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 189 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT EHGYTE P +V +YGTGQ+PKFA+D+F T ++LIPT+E Sbjct: 190 FMLDTHTLEHGYTEHYTPYIVNGGTLYGTGQLPKFAEDLFHVTRGGDESKTAQYLIPTAE 249 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II + LPL+ T +P FRSEAG+ G+D RG++RQHQF K E+V I E Sbjct: 250 VTLTNTVAGSIIPFEQLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPE 309 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 310 KSYGALEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSC 369 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IPT L Sbjct: 370 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPTAL 428 Query: 414 RPYMNNLAVIKKE 426 +PYM +A ++ + Sbjct: 429 QPYMGGVAKLEVK 441 >gi|217973367|ref|YP_002358118.1| seryl-tRNA synthetase [Shewanella baltica OS223] gi|254783045|sp|B8EET7|SYS_SHEB2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|217498502|gb|ACK46695.1| seryl-tRNA synthetase [Shewanella baltica OS223] Length = 428 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 200/429 (46%), Positives = 263/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E L R ++ L+EK ++L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELEVTAERLATRGFILDIAHLTQLEEKRKLLQVATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G V+A+ + L QL + E V + + +PN+P E PIG Sbjct: 61 AKARG--EDVEAIMAQVGDLGSQLDARKIELAAVLEEVNAIAMSMPNLPDESAPIGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + ++H ++GE L +DF A K++G+RF V+ G +A L RA+GQ Sbjct: 119 ENVEVRRWGTPRTFNFPIKDHIDLGEGLNGLDFKNAVKITGSRFIVMKGQVARLNRAIGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT EHGYTE PLLV + ++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTIEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I++ LP++ T FRSEAGS G+DTRG++RQHQF K E+V I + ED Sbjct: 239 PLTNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE +L+RL L YR V LCTGD+GF + KTYD+EVWL QN YREISSCS Sbjct: 299 SMAALEALTGHAETVLQRLGLPYRTVILCTGDMGFGSSKTYDIEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR HTLNGSG+AVGR L+AILENY NADGS+TIP VLR Sbjct: 359 NMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSITIPEVLR 418 Query: 415 PYMNNLAVI 423 PYM L I Sbjct: 419 PYMGGLTQI 427 >gi|53720210|ref|YP_109196.1| seryl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|53725981|ref|YP_103689.1| seryl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|67643953|ref|ZP_00442696.1| serine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|76811815|ref|YP_334445.1| seryl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121599178|ref|YP_992139.1| seryl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124384403|ref|YP_001028583.1| seryl-tRNA synthetase [Burkholderia mallei NCTC 10229] gi|126450411|ref|YP_001081518.1| seryl-tRNA synthetase [Burkholderia mallei NCTC 10247] gi|126454758|ref|YP_001067277.1| seryl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|134280315|ref|ZP_01767026.1| seryl-tRNA synthetase [Burkholderia pseudomallei 305] gi|166998315|ref|ZP_02264175.1| serine--tRNA ligase [Burkholderia mallei PRL-20] gi|167739749|ref|ZP_02412523.1| seryl-tRNA synthetase [Burkholderia pseudomallei 14] gi|167816969|ref|ZP_02448649.1| seryl-tRNA synthetase [Burkholderia pseudomallei 91] gi|167851461|ref|ZP_02476969.1| seryl-tRNA synthetase [Burkholderia pseudomallei B7210] gi|167912098|ref|ZP_02499189.1| seryl-tRNA synthetase [Burkholderia pseudomallei 112] gi|217420921|ref|ZP_03452426.1| serine--tRNA ligase [Burkholderia pseudomallei 576] gi|237813402|ref|YP_002897853.1| serine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|242317656|ref|ZP_04816672.1| serine--tRNA ligase [Burkholderia pseudomallei 1106b] gi|254175570|ref|ZP_04882230.1| seryl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|254181010|ref|ZP_04887608.1| seryl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|254191854|ref|ZP_04898357.1| seryl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|254196127|ref|ZP_04902552.1| seryl-tRNA synthetase [Burkholderia pseudomallei S13] gi|254202385|ref|ZP_04908748.1| seryl-tRNA synthetase [Burkholderia mallei FMH] gi|254207717|ref|ZP_04914067.1| seryl-tRNA synthetase [Burkholderia mallei JHU] gi|254260671|ref|ZP_04951725.1| serine--tRNA ligase [Burkholderia pseudomallei 1710a] gi|254356383|ref|ZP_04972659.1| seryl-tRNA synthetase [Burkholderia mallei 2002721280] gi|67461699|sp|Q62HY1|SYS_BURMA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67461707|sp|Q63RS1|SYS_BURPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123598315|sp|Q3JPQ8|SYS_BURP1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166200607|sp|A3MMN2|SYS_BURM7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166201237|sp|A2S9G4|SYS_BURM9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166201238|sp|A1V1N6|SYS_BURMS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166201239|sp|A3NY56|SYS_BURP0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|52210624|emb|CAH36608.1| seryl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|52429404|gb|AAU49997.1| seryl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|76581268|gb|ABA50743.1| seryl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121227988|gb|ABM50506.1| seryl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124292423|gb|ABN01692.1| serine--tRNA ligase [Burkholderia mallei NCTC 10229] gi|126228400|gb|ABN91940.1| seryl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|126243281|gb|ABO06374.1| serine--tRNA ligase [Burkholderia mallei NCTC 10247] gi|134248322|gb|EBA48405.1| seryl-tRNA synthetase [Burkholderia pseudomallei 305] gi|147746632|gb|EDK53709.1| seryl-tRNA synthetase [Burkholderia mallei FMH] gi|147751611|gb|EDK58678.1| seryl-tRNA synthetase [Burkholderia mallei JHU] gi|148025380|gb|EDK83534.1| seryl-tRNA synthetase [Burkholderia mallei 2002721280] gi|157939525|gb|EDO95195.1| seryl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|160696614|gb|EDP86584.1| seryl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|169652871|gb|EDS85564.1| seryl-tRNA synthetase [Burkholderia pseudomallei S13] gi|184211549|gb|EDU08592.1| seryl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|217396333|gb|EEC36350.1| serine--tRNA ligase [Burkholderia pseudomallei 576] gi|237505314|gb|ACQ97632.1| serine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|238525426|gb|EEP88854.1| serine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|242140895|gb|EES27297.1| serine--tRNA ligase [Burkholderia pseudomallei 1106b] gi|243065387|gb|EES47573.1| serine--tRNA ligase [Burkholderia mallei PRL-20] gi|254219360|gb|EET08744.1| serine--tRNA ligase [Burkholderia pseudomallei 1710a] Length = 433 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 200/430 (46%), Positives = 274/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYPLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + E+ + L +L+ +PNVP E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKASAVKLDEIQARLSELMLEMPNVPHESVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF+VL G +A L RAL Q Sbjct: 119 ENVEVRRWGAPRQFDFDVKDHVDVGTPLG-LDFETGAKLSGARFTVLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V + +YGTGQ+PKFA+DMF ++LI TSE Sbjct: 178 FMLDTHTQQHGYSETYTPYIVNPDVLYGTGQLPKFAEDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E+ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSIVEASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L+L YRVV+LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLELPYRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPVAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGVERI 426 >gi|330889681|gb|EGH22342.1| seryl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020] Length = 426 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 272/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDGIQAELDALVLSIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTAFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F T +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKITREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I EDS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPEDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+ YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLEPPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|157962050|ref|YP_001502084.1| seryl-tRNA synthetase [Shewanella pealeana ATCC 700345] gi|189083587|sp|A8H4R2|SYS_SHEPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157847050|gb|ABV87549.1| seryl-tRNA synthetase [Shewanella pealeana ATCC 700345] Length = 428 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 194/429 (45%), Positives = 265/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E L R E + L+E + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRSELEMTAERLATRGFILDVERLSKLEETRKSLQVATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V + + +L E+L + E + L + +PN+P E VP G + Sbjct: 61 AKAKG--EDVAPIMAQVGSLGEELDAKKTELAALLEELNAIAMSVPNLPDESVPTGADES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H E+GE +G +DF A K++G+RF V+ G +A + RAL Q Sbjct: 119 ENVEVRRWGTPKEFDFAVKDHVELGENIGGLDFKNAVKITGSRFIVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV ++++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEDSLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I+E +LP++ T P FRSEAGS GRDTRG++RQHQF K E+V + + ED Sbjct: 239 PLTNLVRDTIVEEDNLPIKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQLVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE +L++L L YR + LCTGD+GF + KTYD+EVWL Q+ YREISSCS Sbjct: 299 SMQALEDLTGHAEVVLQKLGLPYRTMVLCTGDMGFGSAKTYDIEVWLPAQDTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RY+ K HTLNGSG+AVGR L+A+LENY NADGS+T+P LR Sbjct: 359 NMQDFQARRMQARYKGKTDKKPSLLHTLNGSGLAVGRTLVAVLENYQNADGSITVPEALR 418 Query: 415 PYMNNLAVI 423 YM L I Sbjct: 419 GYMGGLKKI 427 >gi|323705874|ref|ZP_08117446.1| seryl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534870|gb|EGB24649.1| seryl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 423 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 198/426 (46%), Positives = 271/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR NP+ + A++ + + L +DEK R ++K++E ++ RN S I + Sbjct: 1 MLDIKRIRNNPDEVKKAIELKKENSNIDEFLEIDEKRREILKELESLKNTRNKESENIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG D L E + +++ +E E + L++L+ IPN+P E VP+G S Sbjct: 61 LKKEGK--DADELIKEMKEISDKIKAMESEVKQYDEKLEELLWTIPNIPHESVPVGDSDA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G + H++IG LGL+DF+ A++++G+RF+ G LERAL Sbjct: 119 DNVEIRRWGDVREFDFEVKPHWDIGVELGLLDFEAASRVTGSRFTFYKGLGCRLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLHT +HGYTEV P +V +M+GTGQ+PKF +D F + IPT+EV +TN+ Sbjct: 179 FMMDLHTEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDAFKVAGTDYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y II+S+ LP+ + FR EAGSAGRDTRG++RQHQF K ELV IT E S+ E Sbjct: 239 YRETIIDSEKLPIYNCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKITEPEKSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M+S AE++LK L + YRVVS+CTGDLGF+A K YDLEVW+ Y EISSCS C +F Sbjct: 299 EKMVSDAEDVLKTLGIPYRVVSICTGDLGFTAAKKYDLEVWMPSYGRYVEISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR + ++ HTLNGSGVAVGR AILENY DGSV +P LRPYM Sbjct: 359 QARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQKDGSVVVPEALRPYMR- 417 Query: 420 LAVIKK 425 VI+K Sbjct: 418 CDVIRK 423 >gi|56418548|ref|YP_145866.1| seryl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|67461631|sp|Q5L3Y0|SYS_GEOKA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|56378390|dbj|BAD74298.1| seryl-tRNA synthetase [Geobacillus kaustophilus HTA426] Length = 424 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R E + L +R + + LD+ R LI ++E+++++RN S QI Sbjct: 1 MLDVKILRTQFEEVKEKLMQRGGDLTNIDRFEQLDKDRRRLIAEVEELKSKRNDVSQQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E + L + + +++ ++++ ++ + L L+ IPNVP E VPIG S Sbjct: 61 VLKREKK--DAEPLIAQMREVGDRIKRMDEQIRQLEAELDDLLLSIPNVPHESVPIGQSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ S + H+EI + LGL+DF+RA K++G+RF G A LERAL Sbjct: 119 EDNVEVRRWGEPRSFSFEPKPHWEIADRLGLLDFERAAKVAGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D+H E GY EV P LV +M GTGQ+PKFA+D F + IPT+EV +TN Sbjct: 179 NFMLDIHLDEFGYEEVLPPYLVNRASMIGTGQLPKFAEDAFHLDSEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ + LP+ + + FR+EAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 LHRDEILAADDLPIYYAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+RL L YRVV+LCTGDLGFSA KTYD+EVWL YREISSCS Sbjct: 299 LEKLTRQAETILQRLGLPYRVVALCTGDLGFSAAKTYDIEVWLPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY DGSV +P LRPYM Sbjct: 359 FQARRANIRFRRDPKAKPEYVHTLNGSGLAIGRTVAAILENYQQEDGSVIVPEALRPYMG 418 Query: 419 NLAVIK 424 N VI+ Sbjct: 419 NRDVIR 424 >gi|269216691|ref|ZP_06160545.1| serine--tRNA ligase [Slackia exigua ATCC 700122] gi|269129925|gb|EEZ61008.1| serine--tRNA ligase [Slackia exigua ATCC 700122] Length = 426 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 194/427 (45%), Positives = 271/427 (63%), Gaps = 2/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R++ + + A+K R+ S+ LDE R I + E ++ARRN+ S +IG+ Sbjct: 1 MLDIKFVREHQDVVAQAMKNRNGSWDSDAFNELDESRRSFISEEEGLQARRNAASKEIGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + EG +A K + E++ + E +L +L+S +PN+P + P+G Sbjct: 61 LMREGKNEEAEAAKESVRVINEKIAEASAKRDEAERALTELLSHVPNLPSDTTPVGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN IR G + H+++G LG++DF+R KL+G RF +L G A LERAL Sbjct: 121 ENPEIRRWGTPTEFDFERKAHWDLGPELGILDFERGVKLAGTRFVLLGGLGARLERALIN 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID H GY E P + ++GTGQ+PKF DD+F T +G +LIPT+EV LTN++ Sbjct: 181 FMIDTHI-SRGYKEWWPPAMANATTLFGTGQLPKFEDDLFKTREGMYLIPTAEVQLTNIH 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + E++++ LPL++ P FR EAGSAGRDTRG++R HQF K E+V ED F + E Sbjct: 240 AQEVLDASDLPLKYCAFTPCFREEAGSAGRDTRGLIRVHQFDKVEMVKFATPEDGFNQLE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 M + AE ILK L L +RV+SLCTGDLGFSA KTYDLEVWL + Y+EISSCS C +FQ Sbjct: 300 LMTADAENILKLLGLPHRVISLCTGDLGFSAAKTYDLEVWLPSYDGYKEISSCSCCTDFQ 359 Query: 361 SRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 +RR + +YRD S K ++ +TLNGSG+AVGR + A++ENY DGSV +P VL PYM Sbjct: 360 ARRADIKYRDAASFKGTRYAYTLNGSGLAVGRTMAAVIENYQQPDGSVKVPDVLVPYMGG 419 Query: 420 LAVIKKE 426 + IK E Sbjct: 420 VECIKPE 426 >gi|254491288|ref|ZP_05104469.1| seryl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224463801|gb|EEF80069.1| seryl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 424 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 190/424 (44%), Positives = 264/424 (62%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R E + L +R + + + L+++ + ++++ RNS S IG+ Sbjct: 1 MLDPKLLRNEAETVAKELARRGFQLDIQQLAQLEQERKKAQLNAQELQTERNSRSKNIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E L ++ E + + V + + IPN+P +VP G Sbjct: 61 AKAAG--EDIAPLLKEIEDLGDRHKAAEVQLNAVLEKINDIAMGIPNLPQADVPAGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + G+ ++H ++G +L MDF+ A K+S ARF L+G LA L+RAL Q Sbjct: 119 DNREVTRWGEPRQFDFEPKDHVDLGASLNGMDFETAAKISAARFVTLSGPLAKLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNL 239 FM+D H+ +HGYTE P LV +++ GTGQ+PKF +D+F D +LIPT+EV +TN+ Sbjct: 179 FMLDTHSEQHGYTETYVPYLVNADSLRGTGQLPKFEEDLFKVDDGQFYLIPTAEVPVTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 I E+ LPLRF P FRSEAGS GRD RG++RQHQF K ELV I R +DS H Sbjct: 239 VRDTISENTELPLRFVAHTPCFRSEAGSHGRDVRGLIRQHQFEKVELVQIVRPQDSAAAH 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + + AE+IL+ L+L YR V+LCTGDLGFS+ KTYDLEVWL QN YREISSCS G+F Sbjct: 299 EELTAHAEKILQLLELPYRKVNLCTGDLGFSSTKTYDLEVWLPSQNTYREISSCSNFGDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+ +R+R+P + + HTLNGSG+AVGR L+A+LEN+ ADGSV IP L+PYM Sbjct: 359 QARRLQARWRNPETGKPELVHTLNGSGLAVGRTLLAVLENHQQADGSVVIPEALQPYMGG 418 Query: 420 LAVI 423 I Sbjct: 419 QEKI 422 >gi|300716073|ref|YP_003740876.1| Seryl-tRNA synthetase [Erwinia billingiae Eb661] gi|299061909|emb|CAX59025.1| Seryl-tRNA synthetase [Erwinia billingiae Eb661] Length = 430 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 199/430 (46%), Positives = 275/430 (63%), Gaps = 10/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + S +E+ ++L + E ++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGYKLDVDTLRSQEERRKVLQVETETLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E L + E E+ ++++++ S IPN+P++EVP+G + Sbjct: 61 AKARG--EDIEPLRQEVNALGESLDAAKAELDELLNAIREMASAIPNIPVDEVPLGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G R+H E+GE +DF KL+G+RF V+ G +A + RAL Q Sbjct: 119 ENLEVSRWGTPREFDFAVRDHVELGEMASGLDFAMGAKLTGSRFVVMQGQIALMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +++GTGQ+PKF +D+F T LIPTS Sbjct: 179 FMLDLHTEQHGYLETYVPYLVNHASLHGTGQLPKFGEDLFHTRPLEEEASSSDYALIPTS 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTN+ EI+E +SLPL+FT P FRSEAG+ GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPLTNMVRDEILEEESLPLKFTAHTPCFRSEAGAYGRDTRGLIRMHQFDKVEMVHITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E ++ AE++L+ L+L YR V LCTGD+GF +CKTYDLEVWL Q+ YREISS Sbjct: 299 EDSMDALEELVGHAEKVLQLLELPYRKVLLCTGDMGFGSCKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMGDFQARRMQARCRPKTEKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIAVPEV 418 Query: 413 LRPYMNNLAV 422 L+PYM L Sbjct: 419 LKPYMKGLEF 428 >gi|300022787|ref|YP_003755398.1| seryl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299524608|gb|ADJ23077.1| seryl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 462 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 227/458 (49%), Positives = 294/458 (64%), Gaps = 34/458 (7%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR N + D +L++R L PQ+ +++LD+K R + ++D ++RRN+ S +IG+ Sbjct: 1 MFDIKWIRDNADAFDASLQRRGLAPQAAALVALDDKRRATLTALQDAQSRRNAASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E + LK+ + E +E ++ + +K + IPN+P +VP G Sbjct: 61 AKGAKDEATAARLMAEVADLKDTIARGEDDERKLDAEIKAALEVIPNLPRADVPDGADET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R VG ++HFEIGEALGLMDF+ A K+SGARF VL G LA LERAL Sbjct: 121 GNVEVRRVGTPARLDFTPKQHFEIGEALGLMDFEAAQKISGARFVVLKGALARLERALAS 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------------ 222 FM+DLHTSE GYTEV+ P+LVR EAM+GT Q+PKF D F Sbjct: 181 FMLDLHTSEFGYTEVNPPILVRREAMFGTAQLPKFEIDQFWALSGIQFFDMGEIEKRSAS 240 Query: 223 ----------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 + LIPT+EV LTNL +II+ LP+R T P FRSEAG Sbjct: 241 KTDPQIAFQIAREAALEAAKGLIPTAEVPLTNLVREQIIDEAQLPMRVTAWTPCFRSEAG 300 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 +AG+DTRGM+RQHQF K ELVSIT + S EHERM SCAEE+LKRL L +R + LCTGD Sbjct: 301 AAGKDTRGMIRQHQFSKVELVSITTPDASLDEHERMTSCAEEVLKRLGLPFRTIVLCTGD 360 Query: 327 LGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSG 386 +GF++ KTYD+EVWL GQN YREISSCS CG+FQ+RRM++R+R + + HTLNGSG Sbjct: 361 MGFASQKTYDIEVWLPGQNAYREISSCSVCGDFQARRMDARFRPKDGGKPVYVHTLNGSG 420 Query: 387 VAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 +AVGR LIA+LENY ADGSV IP LRPYM L I Sbjct: 421 LAVGRTLIAVLENYQQADGSVIIPDALRPYMGGLTKIT 458 >gi|188583939|ref|YP_001927384.1| seryl-tRNA synthetase [Methylobacterium populi BJ001] gi|238692895|sp|B1ZJ12|SYS_METPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|179347437|gb|ACB82849.1| seryl-tRNA synthetase [Methylobacterium populi BJ001] Length = 428 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 236/424 (55%), Positives = 298/424 (70%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NPE D L++R L P S +++LD+ + + + + RRN+ S +IG Sbjct: 1 MHDIRAIRENPEAFDRDLERRGLSPLSAELIALDDARKGAVSAAQAAQERRNALSKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E + LKE+ P L+ + + L + ++ IPN P +VP+G + Sbjct: 61 AKKAKDEARAAELMAEVARLKEEAPGLDAAQAQAAKVLDERLAAIPNQPKADVPLGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ R + + R+HFE+GEA GLMDF+ A KLSG+RF VL G LA LERALGQ Sbjct: 121 GNVEYRRFDSSRARLAEGRQHFELGEATGLMDFEAAAKLSGSRFVVLKGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGYTEV P+LVRDEAM+GT Q+PKF DD F DG WLIPT+EV LTNL Sbjct: 181 FMLDLHTGEHGYTEVVPPVLVRDEAMFGTAQLPKFRDDQFAAGDGFWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I+ LPLRFT L P FR+EAG+AGRDTRGMLRQHQF K ELVSIT E S EHE Sbjct: 241 RENILAEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFNKVELVSITAPEKSAEEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML+CAE +L++LDL YRV++LCTGD+GF++ KTYD+EVW+ GQ YREISSCS CG FQ Sbjct: 301 RMLACAEAVLQKLDLTYRVMTLCTGDMGFASQKTYDIEVWVPGQQTYREISSCSVCGEFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + + F HTLNGSGVAVGR LIA++ENY N DGSVTIP+VL+PYM L Sbjct: 361 ARRMNARYRAKEGRGVGFVHTLNGSGVAVGRALIAVMENYQNPDGSVTIPSVLQPYMGGL 420 Query: 421 AVIK 424 I+ Sbjct: 421 NRIE 424 >gi|84517344|ref|ZP_01004698.1| seryl-tRNA synthetase [Loktanella vestfoldensis SKA53] gi|84508824|gb|EAQ05287.1| seryl-tRNA synthetase [Loktanella vestfoldensis SKA53] Length = 430 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 205/430 (47%), Positives = 269/430 (62%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR P+ D AL +R L P + IL LDE R LI E +A N S +G Sbjct: 1 MHDIRSIRDTPDAFDTALSRRGLAPVAATILDLDEARRKLILAAETAQAEANKASKDVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + D L+ + K ++ + E +L L++ +PN+P +P G Sbjct: 61 AKARGDDAEFDRLRGLIADSKSRIAAMNDEAKAKDQALSDLLATLPNLPDPSIPDGKDEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G EH++I MDF+ A KLSG+RF +L+G +A L RAL Q Sbjct: 121 DNVEIRRHGTPRIFSFAPVEHYDIAGIKQGMDFETAAKLSGSRFVLLSGAVARLHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH EHG TE P++VR++ MYGTGQ+PKF +D + TT+G WLIPT+EV+LTN+ Sbjct: 181 FMLDLHVEEHGLTETITPVMVREDMMYGTGQLPKFGEDSYQTTNGWWLIPTAEVTLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + E ++ +LP R FRSEAGSAGRDT GMLRQHQF K E+VSIT S EH+ Sbjct: 241 NGETVDESTLPRRHVAHTLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSITTPNQSAAEHD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CA+ +L+RL L YR V LC GD+G A KT+D+EVWL GQN YREISS S CG++Q Sbjct: 301 RMTQCAQTVLERLGLPYRTVVLCAGDMGAGATKTHDIEVWLPGQNTYREISSVSVCGDYQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R +F HTLNGSG+AVGR LIA++EN DGSV +P L PY+ Sbjct: 361 ARRMNARFRPAGGGKPEFVHTLNGSGLAVGRTLIAVVENGQQEDGSVDLPAALHPYLGGK 420 Query: 421 AVIKKEHILE 430 I E +LE Sbjct: 421 TRITAEGMLE 430 >gi|28870509|ref|NP_793128.1| seryl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|38258311|sp|Q87ZS9|SYS_PSESM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|28853757|gb|AAO56823.1| seryl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] Length = 426 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 273/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDAIQAELDALVLNIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTAFGFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I +DS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|330958183|gb|EGH58443.1| seryl-tRNA synthetase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 426 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 272/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I +L+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIEALEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDAIQAELDALVLNIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTVFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I ++S Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDESM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPDVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|313891838|ref|ZP_07825443.1| serine--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|313119832|gb|EFR43019.1| serine--tRNA ligase [Dialister microaerophilus UPII 345-E] Length = 434 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 275/424 (64%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+N + + L R+ +L LD K R L+++ E +++RRN S I Sbjct: 1 MLDLKFIRENFDLVKENLINRNNNFDLNKVLELDRKRRELLQETEKLKSRRNIESKNIAI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +G A E + Q+ ++ + +++ L L+ IPN+ E VP+G + Sbjct: 61 AKKKG--EDASAAIAEMRKVGNQISAIDIDLNKIEKELHNLLLHIPNIVDESVPVGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN IR G + H+E+GE+L ++DF+RA K+SGARF+ +A LERA+ Sbjct: 119 ENPEIRRWGVPRKFDFPIKAHYELGESLKMLDFERAGKVSGARFTFYIDAIAKLERAVYN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+DLHT E +TEV P ++ + +M GTGQ+PKFA+DM+ + ++ PT+EV LTN Sbjct: 179 FMLDLHTVEGTFTEVIPPYIINESSMQGTGQLPKFAEDMYKVEGETMYMTPTAEVPLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI++ LP+ FT L P FR EAGSAG+DTRG++RQHQF K E+V + EDS E Sbjct: 239 FAGEILDESILPVHFTALTPCFRKEAGSAGKDTRGLIRQHQFQKVEMVKYCKPEDSKDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + + AE++L+ L+L YRVV LCTGD+GFSA KTYD+EVW+ QN YREISSCS C +F Sbjct: 299 ESLTNEAEKVLQELNLPYRVVCLCTGDIGFSASKTYDVEVWMPAQNKYREISSCSNCLDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSG+AVGR + AI+ENY N DGS+T+P LRPYM N Sbjct: 359 QARRANIRFRRCKGAKPEFVHTLNGSGLAVGRTVAAIMENYQNEDGSITVPEKLRPYMKN 418 Query: 420 LAVI 423 + VI Sbjct: 419 IKVI 422 >gi|262281252|ref|ZP_06059034.1| seryl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] gi|262257483|gb|EEY76219.1| seryl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] Length = 425 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 189/425 (44%), Positives = 269/425 (63%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 3 MIDPKLLRNNIEAVNAALAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 62 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G + + Sbjct: 63 IKKSGG--DASEIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKNED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 121 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGSLARLQRALTQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 181 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII+++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 241 FVRDEIIDTERLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 301 LEDLTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY DGS+ +P VLRPYM Sbjct: 361 FQARRMKARYR-MDQKKTELVHTLNGSGLAVGRTLLAVMENYQREDGSIEVPEVLRPYMG 419 Query: 419 NLAVI 423 L I Sbjct: 420 GLTFI 424 >gi|328943493|ref|ZP_08240958.1| serine--tRNA ligase [Atopobium vaginae DSM 15829] gi|327491462|gb|EGF23236.1| serine--tRNA ligase [Atopobium vaginae DSM 15829] Length = 427 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 201/426 (47%), Positives = 282/426 (66%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R+NP+ +D + R + E LDE R I ++E ++A RNS S QIG Sbjct: 1 MLDIRFVRENPDVVDKSCASRQNAHWDREQFFELDELRRSTIVEVERLQAERNSASKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + EG A K + + K ++ LE++ L L+S IPN+P E VP G Sbjct: 61 KLMQEGKKDEAQAAKEQVAAGKARIAELEEQRASAEKQLHDLVSAIPNIPHESVPYGKDD 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN +R G S +R H+++G ++DFDR KL+G+RF VL G+ A +ERAL Sbjct: 121 SENKEVRKWGTPRSFDFDARAHWDLGTQTHMIDFDRGVKLAGSRFYVLGGYGAQMERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 F ID+H +E G+ E P+L ++++GTGQ+PKF +D+F ++ +LIPT+EV LTNL Sbjct: 181 NFFIDMH-NEAGFKEWWPPVLTNYDSLFGTGQLPKFDEDLFHVSNDLYLIPTAEVMLTNL 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E++++ LPL++T P FR EAGSAGRDTRG++R H+F K E+V + EDS + Sbjct: 240 HRDEVLDASQLPLKYTAFTPCFREEAGSAGRDTRGIIRVHEFDKVEMVKFAKPEDSMNQL 299 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M++ AE+ L+ L L YRVVSLCTGD+GFSACK YDLEVWL N Y+EISSCS C +F Sbjct: 300 ESMVAEAEKCLQVLGLAYRVVSLCTGDIGFSACKCYDLEVWLPSYNNYKEISSCSNCWDF 359 Query: 360 QSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RR N +YRDP+ K ++ HTLNGSG+AVGRC+ AI+ENY NADGS+++P L+PYM Sbjct: 360 QARRANIKYRDPSEFKGTRYVHTLNGSGLAVGRCMAAIMENYQNADGSISVPEALQPYMR 419 Query: 419 NLAVIK 424 L I Sbjct: 420 GLKTIP 425 >gi|330965617|gb|EGH65877.1| seryl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 426 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 196/427 (45%), Positives = 272/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDAIQAELDALVLNIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTAFDFEVKDHVALGEKFRWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I +DS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|167855515|ref|ZP_02478278.1| seryl-tRNA synthetase [Haemophilus parasuis 29755] gi|167853381|gb|EDS24632.1| seryl-tRNA synthetase [Haemophilus parasuis 29755] Length = 434 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 197/436 (45%), Positives = 271/436 (62%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N E + LK KR+ + SL+E+ + L K E+++A RN+ S IG Sbjct: 1 MIDQNLLRTNLEEVAQILKLKRNFNLDVARVTSLEEQRKALQVKAENLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + AL E T+ +L + E +V + +++L+ IPN+P +EVP+G Sbjct: 61 AAKARG--EDISALLTEVDTMGSELDAAKVELDKVQAEIRELLLNIPNLPADEVPVGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G ++H +GE LG +DF KL+G+RF V+ +A L RAL Sbjct: 119 SENLEVSRWGTPRQFDFEIKDHVTLGEGLGGLDFPAGVKLTGSRFVVMKSGIARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E P LV + +YGTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETYVPYLVNHDTLYGTGQLPKFGEDLFHTQPLEGQDPNAVQKPYAL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EI++ +SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEILDEESLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L+L YR + LC+GD+GF + KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGHAEKVLQLLNLPYRKMLLCSGDMGFGSSKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 +P VL+PYM + +IK Sbjct: 419 VPEVLKPYMGGVEIIK 434 >gi|257465419|ref|ZP_05629790.1| seryl-tRNA synthetase [Actinobacillus minor 202] gi|257451079|gb|EEV25122.1| seryl-tRNA synthetase [Actinobacillus minor 202] Length = 435 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 201/436 (46%), Positives = 271/436 (62%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + + LK KR+ E I SL+E+ + L K E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLDEIAQTLKIKRNFTLDVERIKSLEEQRKTLQVKTETLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + +L + +V + ++ ++ +PN+P EEVP+G Sbjct: 61 AAKARG--EDISVLLAEVDNMGNELTEAKNALDQVQAEIRDILLAVPNLPAEEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G+ ++H +GE LG +DF KL+ +RF V+ G LA L RAL Sbjct: 119 SENLEVARWGEPRQFDFEVKDHVTLGENLGGLDFAAGVKLTASRFVVMKGKLARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E + P LV + ++GTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPNETQRPFSL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EII+ ++LPLR+T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEIIDEETLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQFEKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL QN YR Sbjct: 299 IVTPEKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM +R + N K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMAARCKAKNDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 IP VLRPYM L VI+ Sbjct: 419 IPEVLRPYMGGLNVIE 434 >gi|168184974|ref|ZP_02619638.1| serine--tRNA ligase [Clostridium botulinum Bf] gi|182671959|gb|EDT83920.1| serine--tRNA ligase [Clostridium botulinum Bf] Length = 426 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 183/428 (42%), Positives = 266/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR N + AL R + + +L LDE+ R ++ K+E ++++RN S++ Sbjct: 1 MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + EG V + E L E++ + ++ ++ ++ IPN+P +VP G Sbjct: 61 VPKLKKEGK--DVSNIVAEMKNLSEEIKGFDATLAKIDEKIQYIMLRIPNIPNPQVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +NI IR+ + + H++IG L ++DF RA K++G+RF+ G A LERA Sbjct: 119 TDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFQRAGKVTGSRFTFYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT +HGY E+ P +V +M GTGQ+PKF +D F ++ + IPT+EV + Sbjct: 179 VISYFLDTHTEKHGYIEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY E+++ LPL+ + FRSEAGSAGRDTRG++RQHQF K ELV T+ E S+ Sbjct: 239 TNLYRDEVLKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E ++ + AE +LK L + YRVV +C GDLGF+A YDLEVW+ N Y EISSCS Sbjct: 299 DELGKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ + ++ HTLNGSGVA+GR + AILENY N DGSVTIP VLRPY Sbjct: 359 EDFQARRANIRYKEDSKAKPQYVHTLNGSGVAIGRTVAAILENYQNEDGSVTIPEVLRPY 418 Query: 417 MNNLAVIK 424 M IK Sbjct: 419 MGGKEAIK 426 >gi|148270533|ref|YP_001244993.1| seryl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|281412841|ref|YP_003346920.1| seryl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|166223306|sp|A5IMJ4|SYS_THEP1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|147736077|gb|ABQ47417.1| seryl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|281373944|gb|ADA67506.1| seryl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 425 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 210/426 (49%), Positives = 283/426 (66%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ IRQNP+ + AL+KR +P + IL +D R I K ++R+RRN S + Sbjct: 1 MIDIKLIRQNPDLVKEALRKRGEDPATIDEILKIDADWRTTITKTNELRSRRNEISKNVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG + +AL E L E++ LE++E E+ L L+ +PN+P E VP+G Sbjct: 61 RLKKEGKNTEAEALIEEGKRLGEEIKALEEKEKELQKQLNDLLLMVPNIPHESVPVGEDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+ H+++G A GLMDFDRATKLSG+RF+V+ G LA LERAL Sbjct: 121 SQNVEVRRWGEPREFDFTPLAHWDLGPAWGLMDFDRATKLSGSRFTVMYGKLARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTN 238 FM+D+HT EHGYTEV P LV+ E + TGQ+PKF ++++ D +LIPT+EV L Sbjct: 181 NFMLDVHTKEHGYTEVWVPHLVKRETITITGQLPKFEEELYLAERDDLFLIPTAEVPLAA 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+S EI+E K LP ++ P +R EAGS G+D RGM+RQHQF K ELV +T E SF + Sbjct: 241 LHSGEILEEKELPKKYVAYTPCYRREAGSYGKDVRGMIRQHQFDKVELVWVTTPERSFED 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+++ AE IL++L+L YRVVSLCTGDLGF++ KTYD+EVWL N Y+EISSCS + Sbjct: 301 LEQLVKDAETILQKLELPYRVVSLCTGDLGFTSAKTYDIEVWLPSYNAYKEISSCSNVTD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR + L++ HTLNGSG+AVGR L+AILENY DGSV +P VL PY Sbjct: 361 FQARRGNMRYRRRSDGKLEYVHTLNGSGIAVGRALVAILENYQQPDGSVRVPEVLVPYT- 419 Query: 419 NLAVIK 424 VI Sbjct: 420 GFEVIP 425 >gi|145639615|ref|ZP_01795219.1| seryl-tRNA synthetase [Haemophilus influenzae PittII] gi|145271406|gb|EDK11319.1| seryl-tRNA synthetase [Haemophilus influenzae PittII] gi|309750469|gb|ADO80453.1| Seryl-tRNA synthetase [Haemophilus influenzae R2866] Length = 429 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 193/431 (44%), Positives = 263/431 (61%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMNDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHVTLGEEANGLDFAAGAKLTGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALQGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLDVIGK 429 >gi|222100186|ref|YP_002534754.1| Seryl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|254783498|sp|B9K8V5|SYS_THENN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|221572576|gb|ACM23388.1| Seryl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 425 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 209/426 (49%), Positives = 284/426 (66%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ IRQ+P+ + ALKKR + + IL +D + R + ++ ++RA+RN S + Sbjct: 1 MIDIKLIRQDPDFVKDALKKRGEDTDIIDEILKIDSEWRSVTTELNELRAKRNDISKNVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG S +AL E + E++ LE++E E+ S L+ L+ +PN+P E VP+G+ Sbjct: 61 KLKKEGKSSEANALIEEGKRIGEEIKSLEEKEKELQSKLRDLLLRVPNIPHESVPVGSDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+ H+++G A GLMDFDRA+KLSG+RF+V+ G LA LERAL Sbjct: 121 SQNVEVRRWGEPRKFDFAPLAHWDLGPAWGLMDFDRASKLSGSRFTVMYGKLARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D+HT EHGYTEV P LV+ E + TGQ+PKF ++++ T D +LIPT+EV L Sbjct: 181 NFMLDVHTREHGYTEVWVPHLVKRETITITGQLPKFEEELYLTEKDDLFLIPTAEVPLVA 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+S EI+E K LP ++ P +R EAGS G+D RGM+RQHQF K ELV IT E SF + Sbjct: 241 LHSGEILEEKDLPKKYVAYTPCYRREAGSYGKDVRGMIRQHQFDKVELVWITTPERSFDD 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+++ AE IL+RL L YRVVSLCTGDLGF++ KTYD+EVWL N Y+EISSCS + Sbjct: 301 LEQLVRDAETILQRLGLPYRVVSLCTGDLGFASAKTYDIEVWLPSYNAYKEISSCSNVTD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR + L HTLNGSG+AVGR L+AILENY DGSV +P L PY Sbjct: 361 FQARRGNMRYRRRSDGKLTLVHTLNGSGIAVGRTLVAILENYQQPDGSVKVPEALVPYT- 419 Query: 419 NLAVIK 424 VI Sbjct: 420 GFEVIP 425 >gi|116748863|ref|YP_845550.1| seryl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] gi|166223302|sp|A0LI63|SYS_SYNFM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116697927|gb|ABK17115.1| seryl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 423 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 280/424 (66%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R N + +D+ L+ R ++ ++ LD + R +++++E+++ RRN S +I Sbjct: 1 MLDLRFVRDNVDKIDMMLRNRRMDLSLAPLIELDTQRRRILREVEELKFRRNKASEEISN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E S + L E + ++ L++E + + + IPN+P E VP+G Sbjct: 61 LKREKKDSSL--LIEEMKEVSRRVKTLDQELTVIEEHFRDFLLLIPNMPHESVPVGADEK 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + ++ G KP + H+EIGEALG++DF+RA K++GARF++ A LERAL Sbjct: 119 DNPVAKTWGSKPELDFEPKPHWEIGEALGILDFERAAKIAGARFALYWKMGAALERALIA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+D+HT HGYTEV P +V ++ GTGQ+PKF +D+F +L+PT+EV +TN+ Sbjct: 179 FMLDIHTKRHGYTEVLPPFIVNSTSLLGTGQLPKFKEDLFKLEDRDFYLVPTAEVPVTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + +E +E LP +T P FRSEAGS G+DTRG++RQHQF K ELV + + E S+ E Sbjct: 239 HMNETLEESELPKLYTAFTPCFRSEAGSYGKDTRGLIRQHQFNKVELVKLVKPESSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++L AE IL+ L LHYRVV+LCTGD+GFS+ KTYD+EVWL GQN YREISSCS +F Sbjct: 299 EKLLLDAERILQELGLHYRVVTLCTGDMGFSSAKTYDIEVWLPGQNTYREISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSG+AVGR L+AILEN ADGSV+IP LRPY+ N Sbjct: 359 QARRANIRFRRKGQSKTEFVHTLNGSGLAVGRTLVAILENGQQADGSVSIPPALRPYLGN 418 Query: 420 LAVI 423 + I Sbjct: 419 IERI 422 >gi|325295343|ref|YP_004281857.1| Seryl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065791|gb|ADY73798.1| Seryl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 428 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 202/419 (48%), Positives = 275/419 (65%), Gaps = 4/419 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+DI+ +R+ PE + L +R + +L++D + R +I ++ED++A+RN S +I Sbjct: 1 MIDIKLLRKEPEKVKELLSRRDKKYIAMVDELLAVDSERRAIISEVEDLKAKRNKYSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ EG LK+E + E++ LEKE ++ ++LI IPN P VPIG Sbjct: 61 GKLFKEGRKEEALKLKSEVEKISERIVSLEKELTDIEKKFERLILSIPNPPHVSVPIGED 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N++IR G+KP H++I + L ++DF+RATKL+G+RF + A LERAL Sbjct: 121 EEDNVVIRYWGEKPEFCFEPLPHWDIAKELNILDFERATKLAGSRFVIYKKWGAKLERAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 FM+DLHTS HGY E+ P LV + M GTGQ+PKF +D++ + WLIPT+EV LT Sbjct: 181 INFMLDLHTSNHGYEEIIPPFLVNTKTMTGTGQLPKFEEDLYKIENEDLWLIPTAEVPLT 240 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+++ EI+ K LP +T P FR EAG+ GRD RG++R HQF K ELV I E S+ Sbjct: 241 NIHAGEILPEKELPKYYTAYTPCFRREAGAHGRDVRGIMRLHQFNKVELVKIVHPETSYE 300 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+++ AE++L+ L LHYRVV LCTGDLGFSA KTYD+EVW+ QN YREISSCS C Sbjct: 301 ELEKLVREAEKVLQLLGLHYRVVELCTGDLGFSAAKTYDIEVWIPSQNKYREISSCSNCE 360 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR R+RD N K +F HTLNGSG+AVGR +IAILE Y DGSV +P VLR Y Sbjct: 361 DFQARRAKIRFRDKNGK-TRFVHTLNGSGLAVGRTVIAILEQYQQEDGSVIVPEVLRDY 418 >gi|317050489|ref|YP_004111605.1| seryl-tRNA synthetase [Desulfurispirillum indicum S5] gi|316945573|gb|ADU65049.1| seryl-tRNA synthetase [Desulfurispirillum indicum S5] Length = 430 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 265/424 (62%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR N + L +RH + +L+LD + R + +++ ++ RN S QIG+ Sbjct: 1 MLDIKSIRDNGAEVQARLHRRHPDLNLGDLLALDVQRREITSELQAKQSLRNDASKQIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G + + +L +++ LE E+ L+ PN+P VP G Sbjct: 61 LKAQGQ--DAAPIMEQMKSLADEIKALELRSRELDEQQNTLLLGFPNLPHPSVPAGAGEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ IR G R H E+G ALG++DF R K++ +RF++ G A LERAL Sbjct: 119 ENVEIRRWGTPRQFDFEPRPHDELGTALGMLDFARGVKIAQSRFTLYKGMGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNL 239 FM+D+HT EHGYTEV PLLV E+M TGQ+PKF +D+F T LIPT+EV +TN+ Sbjct: 179 FMLDIHTGEHGYTEVQPPLLVNRESMTATGQLPKFEEDLFATEGGNLLLIPTAEVPVTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ +LPL +T P FR EAGS G+DT+G++RQHQF K ELV + S+ E Sbjct: 239 HRDEILPMDALPLNYTAYTPCFRREAGSYGKDTKGLIRQHQFNKVELVKFCHPDTSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E +L AE IL+RL+L YRVV LC+GDLGFSA KTYD+EVW+ QN +REISSCS +F Sbjct: 299 ETLLHHAEVILQRLELPYRVVCLCSGDLGFSAAKTYDIEVWVPSQNTFREISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R++D K+ + HTLNGSG+AVGR L+AILEN N+DGS++IP L PYM Sbjct: 359 QARRGAIRFKDATGKN-RLVHTLNGSGLAVGRTLVAILENCQNSDGSISIPKALIPYMGG 417 Query: 420 LAVI 423 L I Sbjct: 418 LERI 421 >gi|163801972|ref|ZP_02195868.1| seryl-tRNA synthetase [Vibrio sp. AND4] gi|159174113|gb|EDP58921.1| seryl-tRNA synthetase [Vibrio sp. AND4] Length = 435 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 191/434 (44%), Positives = 265/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + + I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVDTIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E +V + L + +PN+P ++VP G N Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELEQVMAQLDEFTLSVPNIPADDVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ + ++H ++GE G +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKTYDFELKDHVDLGEMGGGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 PTVL+ YM I Sbjct: 421 PTVLQKYMAGATHI 434 >gi|163940700|ref|YP_001645584.1| seryl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|163862897|gb|ABY43956.1| seryl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 424 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 194/426 (45%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N E + L R E + + LD+ R L+ ++E+++++RN S +I Sbjct: 1 MLDVKVLRANFEEVKKKLINRGGEFLELDTFEELDQNRRELLVEVEELKSKRNGVSERIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + L +E + E + L+ E V L ++ +PN+P E VPIG S Sbjct: 61 KLKREKQ--DANELISEMREVGESIKTLDDELRNVEEKLNSILLSLPNIPNETVPIGASE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+ ++ H+E+ E LGL+DF+RA K++G+RF G A LERA+ Sbjct: 119 DDNVELRKWGEINEFSVEAKPHWEVAEKLGLLDFERAAKVTGSRFVYYNGLGARLERAVA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW-LIPTSEVSLTN 238 FM+DLH EHGYTEV P +V +++ GTGQ PKF +D+F D + LIPT+EV L N Sbjct: 179 NFMLDLHVEEHGYTEVIPPFIVNSDSLIGTGQFPKFKEDVFTLKDTDYSLIPTAEVPLAN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+ LP+ FT P FRSEAGSAGRDTRG++RQHQF K E+V T+ E+S+ E Sbjct: 239 YYRDEILNGAELPINFTAHTPCFRSEAGSAGRDTRGLIRQHQFSKVEMVKYTKPEESYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L L YRV+ LCT D+ F A KTYD+EVWL YREISSCS C + Sbjct: 299 LEKLTANAERVLQLLRLPYRVIVLCTADIAFPAAKTYDIEVWLPSYGGYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR + R+R +F HTLNGSG+A+GR + AILENY DGSV IP VLRPYM Sbjct: 359 FQARRASIRFRRTPGAKPEFVHTLNGSGLAIGRTVAAILENYQQEDGSVIIPEVLRPYMG 418 Query: 419 NLAVIK 424 + VIK Sbjct: 419 GVGVIK 424 >gi|167720765|ref|ZP_02404001.1| seryl-tRNA synthetase [Burkholderia pseudomallei DM98] Length = 433 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 200/430 (46%), Positives = 274/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYPLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + E+ + L +L+ +PNVP E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKASAVKLDEIQARLSELMLEMPNVPHESVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF+VL G +A L RAL Q Sbjct: 119 ENVEVRRWGAPRQFDFDVKDHVDVGTPLG-LDFETGAKLSGARFTVLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V + +YGTGQ+PKFA+DMF ++LI TSE Sbjct: 178 FMLDTHTQQHGYSETYTPYIVNPDVLYGTGQLPKFAEDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E+ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSIVEASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L+L YRVV+LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLELPYRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPIAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGVERI 426 >gi|331017250|gb|EGH97306.1| seryl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 426 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 273/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDAIQAELDALVLSIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTAFGFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I +DS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|37198253|dbj|BAC94089.1| seryl-tRNA synthetase [Vibrio vulnificus YJ016] Length = 447 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 192/434 (44%), Positives = 266/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 13 MLDSKLLRTELDETAAKLARRGFKLDVETIGKLEEQRKSIQVEVENLQSTRNSISKQIGQ 72 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++ G+ + +K + +L L + + E V + L +I +PN+P +EVP G N Sbjct: 73 LMSAGDKEGAEKIKQQIGSLGSDLDVKKIELDAVMAQLDDIILSVPNIPADEVPNGKDEN 132 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ S ++H ++GE +DF A K++GARF V+ G A L RA+ Q Sbjct: 133 DNLEISRWGEPKSYDFELKDHVDLGEMGDGLDFASAVKITGARFIVMKGQFARLHRAIAQ 192 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 193 FMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGKDLFHTEPLTEKASDEEPRKLSLI 252 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 253 PTAEVPVTNLVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 312 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ QN YRE Sbjct: 313 TKPEDSMNALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSHKTYDLEVWVPAQNTYRE 372 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 373 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 432 Query: 410 PTVLRPYMNNLAVI 423 PTVL+ YM I Sbjct: 433 PTVLQKYMGGATHI 446 >gi|332530379|ref|ZP_08406324.1| seryl-tRNA synthetase [Hylemonella gracilis ATCC 19624] gi|332040190|gb|EGI76571.1| seryl-tRNA synthetase [Hylemonella gracilis ATCC 19624] Length = 437 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 189/439 (43%), Positives = 272/439 (61%), Gaps = 15/439 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD+ +R++ + + L+ R + +L+ + + L + E+++ +RNS S Q Sbjct: 1 MLDLNLLRKDLDGVLARLETRKKPQPYLDAAQFRALEAERKTLQTRTEELQGKRNSLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G +A K E + LK +L ++ ++ L+ +PN+P E VP+G+ Sbjct: 61 IGALMGQGKKDEAEAAKAEVNALKGELDTSAARLEQIQEQMQNLLLAVPNLPHESVPVGS 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N+++R G+ ++H ++GE LG +DFD KL+GARF+V+ G +A L RA Sbjct: 121 DEHGNVVVRKWGEPKQYGFTVKDHVDLGEPLG-LDFDTGAKLTGARFTVMKGQIARLHRA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC----------TTDGRW 227 L QFM+D+ T +HGYTE P +V + + GTGQ+PKF +D+F + Sbjct: 180 LAQFMLDVQTQQHGYTECYTPYIVNADTLRGTGQLPKFEEDLFAAKKGGQEGEAENVSLY 239 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LIPTSEV+LTN EI+ LP++ T P FRSEAGS GRDTRGM+RQHQF K E+V Sbjct: 240 LIPTSEVTLTNFVRDEIVAEADLPIKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMV 299 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 I + S+ E M AE IL++L L YRV+SLCTGD+GF A KTYDLEVWL QN Y Sbjct: 300 QIVHPDKSYEALEEMTRHAEAILQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTY 359 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 REISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LENY ADGSV Sbjct: 360 REISSVSNCEAFQARRLQARFKNAQGKN-ELLHTLNGSGLAVGRALVAVLENYQRADGSV 418 Query: 408 TIPTVLRPYMNNLAVIKKE 426 +P LRPY+ ++V+ Sbjct: 419 EVPEALRPYLGGVSVLAPT 437 >gi|238749782|ref|ZP_04611287.1| Seryl-tRNA synthetase [Yersinia rohdei ATCC 43380] gi|238712437|gb|EEQ04650.1| Seryl-tRNA synthetase [Yersinia rohdei ATCC 43380] Length = 430 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 189/431 (43%), Positives = 263/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + + + + + + ++L + E+++A RNS S IG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGFKLDVDTLRAQEARRKVLQAETENLQAERNSRSKLIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L ++L + + E ++ + ++ L IPN+P + VP G N Sbjct: 61 AKARG--EDIEPLRLEVNALGDKLDVAKAELDQLQNEIRDLALSIPNLPDDSVPEGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ ++H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNVEISRWGEPRQYDFEIKDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGT Q+PKF D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYLETYVPYLVNHATLYGTAQLPKFGGDLFHTKPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI+E SLPL+ T P FR+EAG+ GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPVTNLVRDEILEEDSLPLKMTAHTPCFRAEAGTYGRDTRGLIRMHQFDKVEMVQITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L L YR V LCTGD+GF + KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMAALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSSKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R + + HTLNGSG+AVGR L+A++ENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRSKVDRKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLEFI 429 >gi|94309640|ref|YP_582850.1| seryl-tRNA synthetase [Cupriavidus metallidurans CH34] gi|166223277|sp|Q1LQJ5|SYS_RALME RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|93353492|gb|ABF07581.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Cupriavidus metallidurans CH34] Length = 435 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 194/438 (44%), Positives = 267/438 (60%), Gaps = 16/438 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R + +L+ + + L + ED++ARRNS S QIG Sbjct: 1 MLDIQLLRKDIDAVAQRLATRGFQLDVALFQALEAERKQLQTQTEDLQARRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G E + + + L + E+ + + IPN+P E VP G Sbjct: 61 LKGKG--EDASGPMAEVAGIGDTLKASAQRLAEIQDQISDAMLSIPNLPHESVPTGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG + ++H ++G LG +DF+ ATK++G+RF+ L G +A + RAL Q Sbjct: 119 ENVEVRRVGTPRTFDFEIKDHVDVGARLG-LDFETATKVTGSRFAFLRGGVARMHRALVQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------------GRWL 228 M+D HT EHGYTE+ P +V +M GTGQ+PKF DD+F +L Sbjct: 178 LMVDTHTLEHGYTEMYVPYIVNAASMRGTGQLPKFEDDLFKVPRKVGGEDGQDAIENFYL 237 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV LTN+ I+ ++ LPLRF P FRSEAGS G+DTRGM+RQHQF K E+V Sbjct: 238 IPTAEVPLTNVVRDAIVAAEKLPLRFVAHTPCFRSEAGSYGKDTRGMIRQHQFDKVEMVQ 297 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + E S E+M AE ILK+L+L +R V LCTGD+GF + KTYD+EVW+ QN YR Sbjct: 298 VVPSEQSMDALEQMTGHAETILKKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQNTYR 357 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS+ G+FQ+RRM +R R K + HTLNGSG+AVGR L+AILENY NADGSVT Sbjct: 358 EISSCSSMGDFQARRMQARMRAGQGK-PELVHTLNGSGLAVGRTLVAILENYQNADGSVT 416 Query: 409 IPTVLRPYMNNLAVIKKE 426 +P L+PYM + ++ E Sbjct: 417 VPKALQPYMGGITRLEPE 434 >gi|307245732|ref|ZP_07527818.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306853434|gb|EFM85653.1| Seryl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 435 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 199/436 (45%), Positives = 268/436 (61%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + + ALK KR E + +L+EK + L K E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLDDVANALKVKRGFTLDVERVKALEEKRKALQVKTETLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + AL E + +L + +V + +++L+ +PN+P +EVP+G Sbjct: 61 AAKARG--EDISALLAEVYNMGNELNEAKVALDQVQAEIRELLLSVPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + G+ ++H +GEAL +DF KL+ +RF V+ G LA L RAL Sbjct: 119 TENLEVSRWGEPRQFDFEVKDHVALGEALNGLDFAAGVKLTASRFVVMKGKLARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E + P LV + ++GTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPNETQRPFSL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EII+ SLPLR+T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQFEKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF + KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM++R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 +P VL PYM + VI Sbjct: 419 VPEVLCPYMGGVEVIT 434 >gi|145637661|ref|ZP_01793315.1| seryl-tRNA synthetase [Haemophilus influenzae PittHH] gi|145269121|gb|EDK09070.1| seryl-tRNA synthetase [Haemophilus influenzae PittHH] Length = 429 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 194/431 (45%), Positives = 262/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHVTLGEEANGLDFAAGAKLTGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVWL QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLDVIGK 429 >gi|254508478|ref|ZP_05120597.1| seryl-tRNA synthetase [Vibrio parahaemolyticus 16] gi|219548590|gb|EED25596.1| seryl-tRNA synthetase [Vibrio parahaemolyticus 16] Length = 435 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 192/434 (44%), Positives = 268/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E V + L+++ +PN+P ++VP G + Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELDAVMAQLEEITLSVPNLPADDVPDGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ + ++H ++GE G +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKTYDFELKDHVDLGEMGGGLDFASATKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGY+E+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYSEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLEEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 TR EDS E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TRPEDSMDALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 PTVL+ YM I Sbjct: 421 PTVLQKYMGGATHI 434 >gi|294795199|ref|ZP_06760333.1| serine--tRNA ligase [Veillonella sp. 3_1_44] gi|294453991|gb|EFG22366.1| serine--tRNA ligase [Veillonella sp. 3_1_44] Length = 426 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 187/426 (43%), Positives = 269/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + + L RH + + +S ++ R LI ++E+++A RNS + +I + Sbjct: 1 MLDLKFVRENIDLVQQNLDNRHTKGDLKTFVSAYDERRQLIGRVEELKALRNSVTEEISK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N D E + +++ + EV + L+ +PN+ VP+G + Sbjct: 61 LKR--NKENADEKIAEMKKVGDEIAEFDNRIREVETKLRDAALMLPNMCDASVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ R G+ + H+++GE+L ++DF+RA K+SGARF+V G A LERAL Sbjct: 119 ENVEQRKWGEPRQFNFDVQAHWDLGESLDILDFNRAGKMSGARFTVYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGYTE+ P +V E + GTGQ+PKFA+DM+ + IPT+EV+LTN Sbjct: 179 FMVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVEGTEYFLIPTAEVTLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI + LP +T FR+EAGSAGRDTRG++RQHQF K E+V + + EDSF E Sbjct: 239 HGGEIFSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AEE+L+ L+L +RV++LCTGD+GF + KTYD+EVW+ Q YREISSCS +F Sbjct: 299 ETLTDNAEEVLRLLELPFRVITLCTGDMGFGSAKTYDVEVWMPAQGKYREISSCSNMTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSG+AVGR + AILENY ADGSV IP VL PYM Sbjct: 359 QARRANIKFRRGPKGKPEFVHTLNGSGLAVGRTVAAILENYQQADGSVVIPKVLVPYMGG 418 Query: 420 LAVIKK 425 + VI Sbjct: 419 VEVISP 424 >gi|148825613|ref|YP_001290366.1| seryl-tRNA synthetase [Haemophilus influenzae PittEE] gi|229847080|ref|ZP_04467186.1| seryl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|166222729|sp|A5UB32|SYS_HAEIE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|148715773|gb|ABQ97983.1| seryl-tRNA synthetase [Haemophilus influenzae PittEE] gi|229810164|gb|EEP45884.1| seryl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|309972758|gb|ADO95959.1| Seryl-tRNA synthetase [Haemophilus influenzae R2846] Length = 429 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 193/431 (44%), Positives = 262/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALQGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAKLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLDVIGK 429 >gi|293610923|ref|ZP_06693222.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826575|gb|EFF84941.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 425 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 190/425 (44%), Positives = 268/425 (63%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 3 MIDPKLLRNNIEAVNAALAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 62 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G + Sbjct: 63 IKKSGG--DASEIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I GK ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 121 DNVEISKWGKPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGSLARLQRALTQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 181 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII+++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 241 FVRDEIIDTERLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 301 LEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY DGS+ IP VLRPYM Sbjct: 361 FQARRMKARYR-MDQKKTELVHTLNGSGLAVGRTLLAVMENYQREDGSIEIPEVLRPYMG 419 Query: 419 NLAVI 423 I Sbjct: 420 GATFI 424 >gi|167570875|ref|ZP_02363749.1| seryl-tRNA synthetase [Burkholderia oklahomensis C6786] Length = 433 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 198/430 (46%), Positives = 273/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R SL+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSSLEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + E+ + L L+ +PN+P E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKASAVKLDEIQARLSDLMLQMPNLPHESVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF+VL G +A L RAL Q Sbjct: 119 ENVEVRRWGAPRQFDFDVKDHVDVGTPLG-LDFETGAKLSGARFTVLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V + +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMLDTHTLQHGYSETYTPYIVNPDVLYGTGQLPKFADDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRDTIVDAAALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L+L YRV++LCTGD+GF+A KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAETILQKLELPYRVITLCTGDMGFAAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPVAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGVERI 426 >gi|237800569|ref|ZP_04589030.1| seryl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023429|gb|EGI03486.1| seryl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 426 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 273/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDAIQAELDALVLNIPNLPHESVPLGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTAFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FM++LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMLNLHINEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I +DS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVI 423 M + VI Sbjct: 419 MGGIEVI 425 >gi|54308358|ref|YP_129378.1| seryl-tRNA synthetase [Photobacterium profundum SS9] gi|67461771|sp|Q6LT00|SYS_PHOPR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|46912786|emb|CAG19576.1| Putative seryl-tRNA synthetase [Photobacterium profundum SS9] Length = 430 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 193/429 (44%), Positives = 262/429 (61%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R E + L+EK + L ED++A+RN+ S IGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFTLDVENLRLLEEKRKSLQMMTEDLQAQRNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+GN + + E + L L +K E+ L+ + +PN+P + VP G + Sbjct: 61 AKAQGNHEEAEKILAEVANLGSDLDDAKKALSELLDELQSITMMVPNLPDDSVPAGNDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ I G+ + ++H ++GE G +DF A K+SG+RF V+ G A L RA+ Q Sbjct: 121 ENVEISRWGEPKAYDFEVKDHVDLGEMAGGLDFASAVKISGSRFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF +D+F T LIPT+EV Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTKPATEEGVGMSLIPTAEV 240 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TN+ I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV IT+ ED Sbjct: 241 PVTNMVRDTITDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQITKPED 300 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ QN YREISSCS Sbjct: 301 SMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGAAKTYDLEVWVPAQNTYREISSCS 360 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R+R K + HTLNGSG+AVGR ++AI+EN ADG + IP VLR Sbjct: 361 NMQDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAIMENGQQADGRIEIPVVLR 420 Query: 415 PYMNNLAVI 423 YM I Sbjct: 421 KYMQGATHI 429 >gi|167580961|ref|ZP_02373835.1| seryl-tRNA synthetase [Burkholderia thailandensis TXDOH] Length = 433 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 198/430 (46%), Positives = 274/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G ++ E + +++ + E+ + L +L+ +PNVP E VP+G Sbjct: 61 MKGRG--EDTSSVMAEVGGIGDEMKASAVKLDEIQARLSELMLEMPNVPHESVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF+VL G +A L RAL Q Sbjct: 119 ENVEVRRWGAPRQFDFDVKDHVDVGTPLG-LDFETGAKLSGARFTVLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V + +YGTGQ+PKFA+DMF ++LI TSE Sbjct: 178 FMLDTHTQQHGYSETYTPYIVNPDVLYGTGQLPKFAEDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSIVDASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L+L YRVV+LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLELPYRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPVAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGVERI 426 >gi|85707597|ref|ZP_01038663.1| seryl-tRNA synthetase [Erythrobacter sp. NAP1] gi|85689131|gb|EAQ29134.1| seryl-tRNA synthetase [Erythrobacter sp. NAP1] Length = 426 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 210/425 (49%), Positives = 287/425 (67%), Gaps = 1/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP D + +R LEP + IL+LDE+ R L K+++ ++RRN S IG Sbjct: 1 MHDIRMIRDNPHEFDAVMARRGLEPVAAQILALDEERRALTTKLQEAQSRRNEASKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ +G+ +ALK E + +K +P LE+ E EV L ++ +PN+ VP G + Sbjct: 61 AMGKGDKDAAEALKAEVAQIKADMPALEESEREVAKRLDDMMLALPNLLDPSVPDGEDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+KPS + +EH +I ALG MDF+ A K+SGARF+ L G +A L RALGQ Sbjct: 121 DNVYLREWGEKPSFVFDPQEHADIAPALG-MDFETAAKISGARFTFLRGDMARLHRALGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D +T EHG+TE + PLL+ +EA YGTGQ+PKF +D+F TTDGR LI TSE+ L N + Sbjct: 180 FMLDNNTREHGFTECNPPLLINEEAGYGTGQLPKFGEDLFRTTDGRLLISTSEMVLGNSF 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++ P+R T L P FRSEAG+AGRDTRG +RQHQF K E++ + E + E + Sbjct: 240 REQLFAESDFPMRLTALTPCFRSEAGAAGRDTRGFIRQHQFEKVEMIVASLPEKAEEELD 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 R+ + AE IL++L LHYRVV+LC+GD+G + KTYD+EVWL GQ YREISSCS G +Q Sbjct: 300 RITAIAEGILQKLGLHYRVVALCSGDMGAAMMKTYDIEVWLPGQGAYREISSCSNGGTYQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR SK ++ H LNGSG+AVGR L+A++ENY ADGSV +P L PYM + Sbjct: 360 PRRMNARYRPEGSKKSEYFHLLNGSGLAVGRTLVALIENYQQADGSVLVPEALAPYMGGV 419 Query: 421 AVIKK 425 ++ Sbjct: 420 TKLEP 424 >gi|220905568|ref|YP_002480880.1| seryl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254783021|sp|B8J4S2|SYS_DESDA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|219869867|gb|ACL50202.1| seryl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 424 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 186/427 (43%), Positives = 263/427 (61%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +++ PE L AL RH + L LD + R L+ ++E ++++RN SAQ+ Sbjct: 1 MIDLKLVQRQPEVLAKALADRHSGISVDAFLELDGRRRSLLTEVEGLKSKRNEASAQVAA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L E S+L +++ L+ E +V + ++ L+ +PN+P VP+G N Sbjct: 61 LKRSGQ--DAAPLLTELSSLSDRIKELDVETTQVKTDVENLLMSMPNIPDSTVPVGADEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G+ R H +IG ALG +DF+RA +L+G+RF V G A LERAL Sbjct: 119 ENVEVGRWGEPRQLDFEPRPHDDIGTALGGLDFERAARLTGSRFVVSLGWAARLERALVN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 F +D HT + Y EVS P +V +M GT Q+PKF +D+F + + IPT+EV LTNL Sbjct: 179 FFLDRHTRHNDYLEVSPPYMVNRASMTGTAQLPKFEEDLFKLAEWDYFLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ E++E LP + P FRSEAGSAG+DTRG++R HQF K E+V EDSF + Sbjct: 239 HAGEVLEESDLPRAYCAATPCFRSEAGSAGKDTRGIIRLHQFTKVEMVRFAHPEDSFNQL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M A +L+ L+L +RV++LCTGD+GF+A KTYD+EVWL Q YREISSCS C +F Sbjct: 299 ELMRGHACNLLELLELPHRVITLCTGDMGFAAAKTYDVEVWLPAQKTYREISSCSNCTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R+R K F HTLNGSG+ GR + AILEN DGSV +P VL PYM+ Sbjct: 359 QARRADIRFRPKGGK-TAFVHTLNGSGLPTGRTIAAILENGQQKDGSVVLPKVLVPYMDG 417 Query: 420 LAVIKKE 426 + I+ Sbjct: 418 VESIEPR 424 >gi|253682724|ref|ZP_04863520.1| serine--tRNA ligase [Clostridium botulinum D str. 1873] gi|253561046|gb|EES90499.1| serine--tRNA ligase [Clostridium botulinum D str. 1873] Length = 426 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 192/428 (44%), Positives = 279/428 (65%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR NPE + ++ R + + +++LDE+ R ++ ++E ++++RNS S+Q Sbjct: 1 MLDLKRIRNNPEEIKNIMQNRGEDFDNKLIDDVIALDERRRQILVEVEKLKSKRNSESSQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ EG + + E L +++ + E +EV +K ++ IPN+P VP G Sbjct: 61 IGKLKKEGKDT--SDVMAEMKKLSDEIKAFDVELNEVDEKIKYIMLRIPNIPNPNVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ IR G+ S+ H++IG LG++DF+R K++G+RF++ G A LERA Sbjct: 119 SDEDNVEIRKWGEVTKFDFESKAHWDIGVDLGILDFERGGKIAGSRFTIYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D+HT +HGYTE+ P +V E+M GTGQ+PKF +D F + + IPT+EV + Sbjct: 179 IINYFLDMHTIDHGYTEILPPYMVNRESMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y +EI+ + LP++ + FR+EAGSAGRDTRG++RQHQF K ELV + E S+ Sbjct: 239 TNMYRNEILNGEELPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKVELVKFVKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ AE++LK L L YRVV +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 DELEKLTRDAEDVLKGLGLPYRVVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY+D +F HTLNGSGVA+GR + AILENY N DG+VTIP LRPY Sbjct: 359 EDFQARRANIRYKDSQKSKPEFIHTLNGSGVAIGRTVAAILENYQNEDGTVTIPEALRPY 418 Query: 417 MNNLAVIK 424 M NL VIK Sbjct: 419 MRNLEVIK 426 >gi|237746814|ref|ZP_04577294.1| seryl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gi|229378165|gb|EEO28256.1| seryl-tRNA synthetase [Oxalobacter formigenes HOxBLS] Length = 438 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 202/434 (46%), Positives = 272/434 (62%), Gaps = 12/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DIQ +R++ + + L+ R E +L+ + R L + E+++ARRN+ S QIG Sbjct: 1 MIDIQLLRKDIDAVAAKLETRKFELDVATFNALEAQRRQLQTQTEEMQARRNALSKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + A+ E L ++L E EV + L + IPN+P E VP+G + Sbjct: 61 LKS--KKEDASAVMAEVGGLGDKLKANEAALSEVQAKLSGFMLSIPNLPHESVPVGPDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR +G ++H +IG LG +DF+ A KL+GARF V+ G++A L RAL Q Sbjct: 119 ANVEIRRIGTPREFDFEVKDHVDIGVPLG-LDFETAGKLAGARFCVMRGNMARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--------MFCTTDGRWLIPTS 232 FM+D+ T EHGYTE P +V +++YGTGQ+PKFADD + +LIPT+ Sbjct: 178 FMLDVQTMEHGYTECYTPYMVNADSLYGTGQLPKFADDLFAAKKGGQEGENENLYLIPTA 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV+LTN EI+ S LP++ T P FRSEAGS GRDTRGM+RQHQF K E+V I Sbjct: 238 EVTLTNTVRGEILSSGQLPIKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S+ E M+ A +L++L L YRVVSL TGD+GFSA KTYDLEVWL QN YREISS Sbjct: 298 EKSYEALEEMVKNAGRVLEKLGLPYRVVSLSTGDMGFSAAKTYDLEVWLPAQNTYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C FQ+RRM +R+R+ + + HTLNGSG+AVGR L+AILEN+ ADGSVTIPT Sbjct: 358 VSNCEAFQARRMQARFRNEKGR-PELVHTLNGSGLAVGRTLVAILENFQQADGSVTIPTA 416 Query: 413 LRPYMNNLAVIKKE 426 L+PYM+ L + + Sbjct: 417 LQPYMSGLTRLVPK 430 >gi|311028946|ref|ZP_07707036.1| seryl-tRNA synthetase [Bacillus sp. m3-13] Length = 425 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 186/427 (43%), Positives = 265/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N E + L+ R + + LD + R L+ + E ++++RN S QI Sbjct: 1 MLDMKLLRGNFEEIKGKLQHRGEDLSDLDRFEELDARRRDLLVQTEQLKSKRNEVSQQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D L E + +++ + E V +L+ L+ IPN+P E VP+G + Sbjct: 61 VMKREKQ--DADHLIKEMREVGDKVKEFDDELRGVEEALELLLLSIPNIPHESVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+ P+ ++ H++I + LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVEVRKWGEVPTFGFEAKAHWDIADELGVIDFERAGKVTGSRFVFYRGLGARLERALF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH EHGYTEV P LV +M GTGQ+PKF +D F + +PT+EV +TN Sbjct: 179 NFMLDLHVDEHGYTEVLPPYLVNRASMTGTGQLPKFEEDAFLIEKEDYFLVPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ LP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ E Sbjct: 239 MHRDEILSGDQLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE++L+ L L YRV+S+CT DLGF+A K YD+EVW+ Q YREISSCS + Sbjct: 299 LEKLTGNAEKVLQLLGLPYRVLSMCTADLGFTAAKKYDIEVWIPSQETYREISSCSNFES 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R+R + HTLNGSG+AVGR + AILENY DGSV IP VLRPYM Sbjct: 359 FQARRAGIRFRRDPKAKPEHVHTLNGSGLAVGRTVAAILENYQQEDGSVIIPEVLRPYMG 418 Query: 419 NLAVIKK 425 ++ K Sbjct: 419 GKEILTK 425 >gi|299066066|emb|CBJ37247.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Ralstonia solanacearum CMR15] Length = 438 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 200/440 (45%), Positives = 273/440 (62%), Gaps = 19/440 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R E +L+ + + + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDIDAVAARLNDRGYELDVAGFAALEAERKAIQTRTEELQARRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + ++L + V L+ L+ IPNVP E VP G + Sbjct: 61 LKGKG--EDASAVMAEVAGIGDELKASAAQLDVVQGRLQDLLLSIPNVPHESVPAGKNET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + ++H ++G LG +DFD A KLSG+RF+VL G +A L RAL Q Sbjct: 119 ENVEVRREGTPRAFDFAVKDHVDLGAGLG-LDFDVAAKLSGSRFAVLKGPVARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------------G 225 FM+D HT EHGYTE P +V +M GTGQ+PKF +D+F Sbjct: 178 FMLDTHTQEHGYTEAYVPYIVNAASMRGTGQLPKFEEDLFRVPRKMGQATEAEAGEHVEN 237 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPT+EV LTNL EI+ +LP++F +P FRSEAGS G+DTRGM+RQHQF K E Sbjct: 238 FYLIPTAEVPLTNLVRDEIVAGDALPMKFAAHSPCFRSEAGSYGKDTRGMIRQHQFDKVE 297 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I + E SF + M AE IL++L+L +R V LCTGD+GF + KTYD+EVW+ QN Sbjct: 298 MVQIVQPETSFEALDAMTHHAENILRKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQN 357 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISSCS G+FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADG Sbjct: 358 TYREISSCSNMGDFQARRMQARFRNAQGK-PELLHTLNGSGLAVGRTLVAVLENYQNADG 416 Query: 406 SVTIPTVLRPYMNNLAVIKK 425 SVT+P LRPY+ V+K Sbjct: 417 SVTVPAALRPYLGGQEVLKP 436 >gi|170754615|ref|YP_001779642.1| seryl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|229559899|sp|B1IDV4|SYS_CLOBK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|169119827|gb|ACA43663.1| seryl-tRNA synthetase [Clostridium botulinum B1 str. Okra] Length = 426 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 186/428 (43%), Positives = 269/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR N + AL R + + +L LDE+ R ++ K+E ++++RN S++ Sbjct: 1 MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + EG V + E L E++ + ++ ++ ++ IPN+P +VP G Sbjct: 61 VPKLKKEGK--DVSNIVAEMKNLSEEIKGFDATLAKIDEKIQYIMLRIPNIPNPQVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +NI IR+ + + H++IG L ++DF+RA K++G+RF+ G A LERA Sbjct: 119 TDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT +HGYTE+ P +V +M GTGQ+PKF +D F ++ + IPT+EV + Sbjct: 179 VISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EI++ LPL+ + FRSEAGSAGRDTRG++RQHQF K ELV T+ E S+ Sbjct: 239 TNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE +LK L + YRVV +C GDLGF+A YDLEVW+ N Y EISSCS Sbjct: 299 EELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ ++ HTLNGSGVA+GR + AILENY + DGSVTIP VLRPY Sbjct: 359 EDFQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILENYQSEDGSVTIPEVLRPY 418 Query: 417 MNNLAVIK 424 M VIK Sbjct: 419 MGGREVIK 426 >gi|148827255|ref|YP_001292008.1| seryl-tRNA synthetase [Haemophilus influenzae PittGG] gi|166222730|sp|A5UFR9|SYS_HAEIG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|148718497|gb|ABQ99624.1| seryl-tRNA synthetase [Haemophilus influenzae PittGG] Length = 429 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 193/431 (44%), Positives = 261/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHVTLGEEANGLDFAAGAKLTGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALQGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTHLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLDVIGK 429 >gi|294793380|ref|ZP_06758525.1| serine--tRNA ligase [Veillonella sp. 6_1_27] gi|294455811|gb|EFG24176.1| serine--tRNA ligase [Veillonella sp. 6_1_27] Length = 426 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 187/426 (43%), Positives = 269/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + + L RH + + +S ++ R LI ++E+++A RNS + +I + Sbjct: 1 MLDLKFVRENIDLVQQNLDNRHTKGDLKTFVSAYDERRQLIGRVEELKALRNSVTEEISK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N D E + +++ + EV + L+ +PN+ VP+G + Sbjct: 61 LKR--NKENADEKIAEMKKVGDEIAEFDNRIREVETKLRDAALMLPNMCDASVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ R G+ + H+++GE L ++DF+RA K+SGARF+V G A LERAL Sbjct: 119 ENVEQRKWGEPRQFDFDVQAHWDLGENLDILDFNRAGKMSGARFTVYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGYTE+ P +V E + GTGQ+PKFA+DM+ + IPT+EV+LTN Sbjct: 179 FMVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVEGTEYFLIPTAEVTLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ + LP +T FR+EAGSAGRDTRG++RQHQF K E+V + + EDSF E Sbjct: 239 HGGEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AEE+L+ L+L +RV++LCTGD+GF + KTYD+EVW+ Q YREISSCS +F Sbjct: 299 ETLTDNAEEVLRLLELPFRVITLCTGDMGFGSAKTYDVEVWMPAQGKYREISSCSNMTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSG+AVGR + AILENY ADGSV IP VL PYM Sbjct: 359 QARRANIKFRRGPKGKPEFVHTLNGSGLAVGRTVAAILENYQQADGSVVIPKVLVPYMGG 418 Query: 420 LAVIKK 425 + VI Sbjct: 419 VEVISP 424 >gi|282850025|ref|ZP_06259407.1| serine--tRNA ligase [Veillonella parvula ATCC 17745] gi|282580214|gb|EFB85615.1| serine--tRNA ligase [Veillonella parvula ATCC 17745] Length = 426 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 187/426 (43%), Positives = 270/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + + L RH + + +S ++ R LI ++E+++A RNS + +I + Sbjct: 1 MLDLKFVRENIDLVQQNLDNRHTKGDLKTFVSAYDERRQLIGRVEELKALRNSVTEEISK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N D E + +++ + EV + L+ +PN+ VP+G + Sbjct: 61 LKR--NKENADEKIAEMKKVGDEIAEFDNRIREVETKLRDAALMLPNMCDASVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ R G+ + H+++GE+L ++DF+RA K+SGARF+V G A LERAL Sbjct: 119 ENVEQRKWGEPRQFNFDVQAHWDLGESLDILDFNRAGKMSGARFTVYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGYTE+ P +V E + GTGQ+PKFA+DM+ + IPT+EV+LTN Sbjct: 179 FMVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVEGTEYFLIPTAEVTLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ + LP +T FR+EAGSAGRDTRG++RQHQF K E+V + + EDSF E Sbjct: 239 HGGEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AEE+L+ L+L +RV++LCTGD+GF + KTYD+EVW+ Q YREISSCS +F Sbjct: 299 ETLTDNAEEVLRLLELPFRVITLCTGDMGFGSAKTYDVEVWMPAQGKYREISSCSNMTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSG+AVGR + AILENY ADGSV IP VL PYM Sbjct: 359 QARRANIKFRRGPKGKPEFVHTLNGSGLAVGRTVAAILENYQQADGSVVIPKVLVPYMGG 418 Query: 420 LAVIKK 425 + VI Sbjct: 419 VEVISP 424 >gi|299537316|ref|ZP_07050616.1| seryl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298727207|gb|EFI67782.1| seryl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 428 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 185/425 (43%), Positives = 266/425 (62%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR N + L R+ + + LD K R LI K E+++A RN S QI Sbjct: 1 MLDIKRIRDNFTEIKEILLTRNEDLGNLDDFEDLDAKRRELIAKTEELKAERNKVSEQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N VD + + +++ ++ + + V K ++ +PN+P E VP+GT+ Sbjct: 61 IMKR--NKENVDEIIARMRQVGDEIKEIDVQLNNVEEHFKDMMMRLPNIPHESVPVGTTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++NI + G+ P+ + H+++ L + DF+R K++G+RF G A LERAL Sbjct: 119 DDNIEEYTWGEIPTFDFDIKAHWDLATDLKIADFERGAKVTGSRFLFYRGLGARLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+DLH EHGY E+ P++V +++ GTG +PKF +D+F ++IPT+EV +TN Sbjct: 179 TFMMDLHAEEHGYEEMLPPIIVNRDSLTGTGNLPKFEEDLFKLEETDYFMIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+ +++LP F + +P FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ + Sbjct: 239 FYRDEILLAEALPQGFASYSPCFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEDSYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE++L+ L L YR + +CT DLGF+A K YDLEVW+ QN+YREISSCS + Sbjct: 299 LELLTGHAEKVLQLLGLPYRKLKMCTADLGFTAAKKYDLEVWIPAQNMYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + ++ HTLNGSG+A+GR + AILENY ADGSV +P VLRPYM Sbjct: 359 FQARRANIRFRREPNAKPEYVHTLNGSGLAIGRTVAAILENYQQADGSVVLPEVLRPYMG 418 Query: 419 NLAVI 423 VI Sbjct: 419 GKEVI 423 >gi|83718513|ref|YP_442109.1| seryl-tRNA synthetase [Burkholderia thailandensis E264] gi|167619053|ref|ZP_02387684.1| seryl-tRNA synthetase [Burkholderia thailandensis Bt4] gi|123537279|sp|Q2SY90|SYS_BURTA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|83652338|gb|ABC36401.1| seryl-tRNA synthetase [Burkholderia thailandensis E264] Length = 433 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 199/430 (46%), Positives = 273/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + E+ + L +L+ +PNVP E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKASAVKLDEIQARLSELMLEMPNVPHESVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF+VL G +A L RAL Q Sbjct: 119 ENVEVRRWGAPRQFDFDVKDHVDVGTPLG-LDFETGAKLSGARFTVLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V + +YGTGQ+PKFA+DMF ++LI TSE Sbjct: 178 FMLDTHTQQHGYSETYTPYIVNPDVLYGTGQLPKFAEDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSIVDASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL+ L+L YRVV+LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQTLELPYRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPVAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGVERI 426 >gi|156974089|ref|YP_001444996.1| seryl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|166223309|sp|A7MSW8|SYS_VIBHB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|156525683|gb|ABU70769.1| hypothetical protein VIBHAR_01800 [Vibrio harveyi ATCC BAA-1116] Length = 435 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 192/434 (44%), Positives = 265/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E +V + L + +PN+P +EVP G N Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELEQVMAQLDEFTLSVPNIPDDEVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ + ++H ++GE G +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKTYDFELKDHVDLGEMGGGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLVEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I + LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTISDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 PTVL+ YM I Sbjct: 421 PTVLQKYMAGATHI 434 >gi|238784519|ref|ZP_04628527.1| Seryl-tRNA synthetase [Yersinia bercovieri ATCC 43970] gi|238714582|gb|EEQ06586.1| Seryl-tRNA synthetase [Yersinia bercovieri ATCC 43970] Length = 430 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 196/431 (45%), Positives = 267/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + E + +E+ ++L + E ++A RN+ S IG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGFKLDVEMLRQQEERRKVLQVETESLQAERNARSKLIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNVLGEKLDAAKVELDKLQNEIRDLALSIPNLPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ R+H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNLEVSRWGEPRKYDFEVRDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R+ + + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRNKTDRKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLEFI 429 >gi|219870880|ref|YP_002475255.1| seryl-tRNA synthetase [Haemophilus parasuis SH0165] gi|254783029|sp|B8F4Q5|SYS_HAEPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|219691084|gb|ACL32307.1| seryl-tRNA synthetase [Haemophilus parasuis SH0165] Length = 434 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 197/436 (45%), Positives = 270/436 (61%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N E + LK KR+ + SL+E+ + L K E+++A RN+ S IG Sbjct: 1 MIDQNLLRTNLEEVAQILKLKRNFNLDVARVTSLEEQRKALQVKAENLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + AL E T+ +L + E +V + +++L+ IPN+P +EVP+G Sbjct: 61 AAKARG--EDISALLTEVDTMGSELDAAKVELDKVQAEIRELLLNIPNLPADEVPVGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G ++H +GE LG +DF KL+G+RF V+ +A L RAL Sbjct: 119 SENLEVSRWGTPRQFDFEIKDHVTLGEGLGGLDFPAGVKLTGSRFVVMKSGIARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E P LV + +YGTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETYVPYLVNHDTLYGTGQLPKFGEDLFHTQPLDGQDPNAVQKPYAL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EI++ +SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEILDEESLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L+L YR + LC+GD+ F + KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGHAEKVLQLLNLPYRKMLLCSGDMSFGSSKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 +P VL+PYM + VIK Sbjct: 419 VPEVLKPYMGGVEVIK 434 >gi|163746865|ref|ZP_02154222.1| seryl-tRNA synthetase [Oceanibulbus indolifex HEL-45] gi|161379979|gb|EDQ04391.1| seryl-tRNA synthetase [Oceanibulbus indolifex HEL-45] Length = 430 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 210/429 (48%), Positives = 280/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NPE D AL +R SE +LSLD R I E +A +N S ++G Sbjct: 1 MHDIRAIRDNPEAFDAALARRGEAAMSEAVLSLDAARRAKIAAAETAKAEQNKASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ S K ++ + E E+ + L +++ +PN P ++VP G Sbjct: 61 AKAKGDEAEFERLRALVSDKKAEVAAMNTEAQELDAQLTDMLARVPNSPADDVPQGADEG 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G KPS EH+EI MDF+ A+K SGARF +L G +A + RAL Q Sbjct: 121 DNVEVKVWGDKPSFDFTPVEHYEIESVKPGMDFETASKTSGARFVMLKGGVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID H E+G TEV+ P+LVRDEAMYGT ++PKF +D + TT+G WL+PTSEV LT Sbjct: 181 FMIDTHVDENGLTEVNTPVLVRDEAMYGTDKLPKFGEDSYQTTNGWWLVPTSEVPLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +E +LP+R T FRSEAGSAGRDT GMLRQHQF K E+VSIT ++S E + Sbjct: 241 GGDTLEQSALPIRLTAHTLCFRSEAGSAGRDTAGMLRQHQFEKVEMVSITHPDESDAEQQ 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM+ CAE IL++L + YR V LCTGD+GF A +TYD+E W+ GQN YREISS ST G+FQ Sbjct: 301 RMVGCAEGILEKLGVPYRTVILCTGDMGFGARRTYDIEAWVPGQNCYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ +F HTLNGSG+AVGRCLIA+LEN ADGSV +P VL PY+ Sbjct: 361 ARRMNARFKPEGGGKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVRLPEVLAPYLGGK 420 Query: 421 AVIKKEHIL 429 + E +L Sbjct: 421 TTLTAEGVL 429 >gi|288554619|ref|YP_003426554.1| seryl-tRNA synthetase [Bacillus pseudofirmus OF4] gi|288545779|gb|ADC49662.1| seryl-tRNA synthetase [Bacillus pseudofirmus OF4] Length = 424 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 187/425 (44%), Positives = 269/425 (63%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R + + L R + + LDEK R +I ++E++++RRN S ++ Sbjct: 1 MLDVKRLRNDLADIKEKLSTRGEDISGLDQFGELDEKRRAIIVEVEELKSRRNQVSQEVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q E D L ET + E++ L+++ + + L L+ IPNVP E P+G + Sbjct: 61 QLKREKK--DADHLIKETREVSEKVKQLDEKLRGLDAELDHLLLTIPNVPHESTPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ R G S + H+++ LG++DF+RA+K++G+RF G A LERAL Sbjct: 119 DDNVEARKWGDVRSFEFEPKPHWDLATDLGILDFERASKVTGSRFVFYKGLGARLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH EHGY EV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMMDLHQDEHGYEEVLPPYMVNRTSMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+++ LP+ +T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILQADQLPIAYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEDSYQE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE++L+ L+L YRV+S+CT DLGF+A K YD+EVW+ + YREISSCS + Sbjct: 299 LENLTGHAEKVLQLLELPYRVMSMCTADLGFTAAKKYDIEVWIPSYDSYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N ++R +F HTLNGSG+AVGR + AILENY DGS+ IP VLRPYM Sbjct: 359 FQARRANIKFRREPKAKAEFVHTLNGSGLAVGRTVAAILENYQQEDGSIEIPKVLRPYMG 418 Query: 419 NLAVI 423 N+ I Sbjct: 419 NVERI 423 >gi|239994319|ref|ZP_04714843.1| seryl-tRNA synthetase [Alteromonas macleodii ATCC 27126] Length = 433 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 199/435 (45%), Positives = 269/435 (61%), Gaps = 9/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + E L R SL+EK + L + +D++ RN S IG+ Sbjct: 1 MLDPKCLRSDIEQTAKRLAARGFNLDVAAFSSLEEKRKTLQSRTQDLQNERNVRSKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L E L ++L + E E+ + L IPN+P E VP G + Sbjct: 61 AKAQG--EDIAPLLAEVGKLGDELDAAKAELSELLEEINTLTQGIPNLPHESVPAGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGE-ALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ I G+ + ++H ++ E +DF A+KL+G+RF V+ G +A L RA+ Sbjct: 119 DNVEISRWGEPRTFDFEVKDHVDVAEGLNNGLDFATASKLTGSRFVVMRGDIARLNRAIA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSE 233 QFM+D HT EHGY E+ P LV +++YGTGQ+PKF +D+F T LIPT+E Sbjct: 179 QFMLDTHTQEHGYQEMYVPYLVNADSLYGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTN+ EI+++K+LP++ T P FRSEAGS GRDTRG++RQHQF K ELV + + E Sbjct: 239 VPLTNIARDEILDAKTLPVKMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +SF E + AE IL++L+L YR V LCTGD+GF ACKTYDLEVWL QN YREISSC Sbjct: 299 ESFDALEALTGHAEVILQKLELPYRKVLLCTGDMGFGACKTYDLEVWLPAQNTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+P + + HTLNGSG+AVGR L+AILEN ADGSVTIP L Sbjct: 359 SNMLDFQARRMQARFRNPETNKTELLHTLNGSGLAVGRTLVAILENNQQADGSVTIPKAL 418 Query: 414 RPYMNNLAVIKKEHI 428 PYM VIK + Sbjct: 419 VPYMAGQEVIKATSV 433 >gi|226951584|ref|ZP_03822048.1| seryl-tRNA synthetase; also charges selenocystein tRNA with serine [Acinetobacter sp. ATCC 27244] gi|226837687|gb|EEH70070.1| seryl-tRNA synthetase; also charges selenocystein tRNA with serine [Acinetobacter sp. ATCC 27244] Length = 423 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 190/425 (44%), Positives = 270/425 (63%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ + L+ + + L K E+++A RN+ + Q+GQ Sbjct: 1 MIDPKLLRNNIEVVNAALAKRGIQLNVQEWADLEARRKDLQSKAENLQAERNAGAKQVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + + +++ E E+ + L++ IPN+P E VP G + Sbjct: 61 IKKSGG--DASEIMARMAAIGDEIKAAEVALAELQTELEQKSLAIPNLPDESVPFGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 119 DNLEILKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV + + GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDTHTLKNGYTEAYVPYLVNADTLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL+++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 239 FVRDEIIDADRLPLKYSAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPEHSMPA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 299 LEELTAHAEGILQALGLPYRKILLCGGDMGFGAVKTYDLEVWVPSQNTYREISSCSNMGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K ++ HTLNGSG+AVGR L+A++ENY ADGS+ IP VLRPYM Sbjct: 359 FQARRMKARYR-VDQKKIELVHTLNGSGLAVGRTLLAVMENYQRADGSIEIPEVLRPYMG 417 Query: 419 NLAVI 423 + I Sbjct: 418 GVTYI 422 >gi|322804293|emb|CBZ01843.1| seryl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 426 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 187/428 (43%), Positives = 270/428 (63%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR N + AL R + + +L LDE+ R ++ K+E ++++RN S++ Sbjct: 1 MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + EG V + E L E++ L+ ++ ++ ++ IPN+P +VP G Sbjct: 61 VPKLKKEGK--DVSNIVAEMKNLSEEIKGLDATLAKIDEKIQYIMLRIPNIPNPQVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +NI IR+ + + H++IG L ++DF+RA K++G+RF+ G A LERA Sbjct: 119 TDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT +HGYTE+ P +V +M GTGQ+PKF +D F ++ + IPT+EV + Sbjct: 179 VISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EI++ LPL+ + FRSEAGSAGRDTRG++RQHQF K ELV T+ E S+ Sbjct: 239 TNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE +LK L + YRVV +C GDLGF+A YDLEVW+ N Y EISSCS Sbjct: 299 EELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ ++ HTLNGSGVA+GR + AILENY + DGSVTIP VLRPY Sbjct: 359 EDFQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILENYQSEDGSVTIPEVLRPY 418 Query: 417 MNNLAVIK 424 M VIK Sbjct: 419 MGGREVIK 426 >gi|238763314|ref|ZP_04624278.1| Seryl-tRNA synthetase [Yersinia kristensenii ATCC 33638] gi|238698413|gb|EEP91166.1| Seryl-tRNA synthetase [Yersinia kristensenii ATCC 33638] Length = 430 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 196/431 (45%), Positives = 266/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + E + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNMLRNELDAVAERLARRGFKLDVEMLRQQEERRKVLQVETESLQAERNSRSKLIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNVLGEKLDAAKAELDKLQNEIRDLALSIPNLPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ R+H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNLEVSRWGEPRKYDFEVRDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYLETYVPYLVNHATLYGTGQLPKFGGDLFHTKPLEEESDSSTYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI+E +SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPVTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R+ + + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRNKTDRKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLEFI 429 >gi|329121075|ref|ZP_08249706.1| serine--tRNA ligase [Dialister micraerophilus DSM 19965] gi|327471237|gb|EGF16691.1| serine--tRNA ligase [Dialister micraerophilus DSM 19965] Length = 434 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 276/424 (65%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+N + + L R+ +L LD K R L+++ E +++RRN S I Sbjct: 1 MLDLKFIRENFDLVKENLINRNNNFDLNKVLELDRKRRELLQETEKLKSRRNIESKNIAI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +G A E + Q+ ++ + +++ L L+ IPN+ E VP+G + Sbjct: 61 AKKKG--EDASAAIAEMRKVGNQISEIDIDLNKIEKELHNLLLHIPNIVDESVPVGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN IR G + H+E+GE+L ++DF+RA K+SGARF+ +A LERA+ Sbjct: 119 ENPEIRRWGVPRKFDFPIKAHYELGESLKMLDFERAGKVSGARFTFYIDAIAKLERAVYN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+DLHT E +TEV P ++ + +M GTGQ+PKFA+DM+ + ++ PT+EV LTN Sbjct: 179 FMLDLHTVEGTFTEVIPPYIINESSMQGTGQLPKFAEDMYKVEGETMYMTPTAEVPLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI+++ LP+ FT L P FR EAGSAG+DTRG++RQHQF K E+V + EDS E Sbjct: 239 FAGEILDASILPVHFTALTPCFRKEAGSAGKDTRGLIRQHQFQKVEMVKYCKPEDSKDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + + AE++L+ L+L YRVV LCTGD+GFSA KTYD+EVW+ QN YREISSCS C +F Sbjct: 299 ESLTNEAEKVLQELNLPYRVVCLCTGDIGFSASKTYDVEVWMPAQNKYREISSCSNCLDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSG+AVGR + AI+ENY N DGS+T+P LRPYM N Sbjct: 359 QARRANIRFRRCKGAKPEFVHTLNGSGLAVGRTVAAIMENYQNEDGSITVPEKLRPYMKN 418 Query: 420 LAVI 423 + VI Sbjct: 419 IKVI 422 >gi|253577336|ref|ZP_04854653.1| seryl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843236|gb|EES71267.1| seryl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 428 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 191/430 (44%), Positives = 276/430 (64%), Gaps = 5/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R ++ ALK R + LDEK R L+++ E ++ RRN+ SA++ Sbjct: 1 MLDVKILRNEYARVEEALKNRGKSLELISGFAPLDEKRRELLQESEALKNRRNTVSAEV- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + N D L E + +++ L++E + + + +L+ IPN+P E VP+G S Sbjct: 60 -AKRKKNKEDADELIVEMREVGDRIKELDEEVRTLEAQIDQLMLSIPNIPHESVPVGASE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R + + H++I LG++DF+ A K++G+RF+ G A LERAL Sbjct: 119 EDNVEVRRWSEPRKFDFTPKAHWDIAADLGILDFEAAAKVTGSRFTFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLT 237 FM+DLH++EHGY E+ P +V +++YGTGQ+PKF +D+F T + +LIPT+EV +T Sbjct: 179 NFMMDLHSNEHGYEEMLPPYIVNQDSLYGTGQLPKFEEDLFKLTGSNDYYLIPTAEVPVT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + EI+ ++ LP + + FRSEAG+AGRDTRG++RQHQF K E++ I + S+ Sbjct: 239 NYHRDEILNAEDLPRYYVAYSSCFRSEAGAAGRDTRGLIRQHQFNKVEMIKIVHPDTSYD 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+M AE +L+ L L YRV++LCTGD+GF+A KTYDLEVWL +YREISSCS Sbjct: 299 ELEKMTENAERVLQLLGLPYRVLALCTGDMGFTAAKTYDLEVWLPESGVYREISSCSNVE 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N R+R +F HTLNGSG+AVGR + AILENY DGSV IP VLRPYM Sbjct: 359 DFQARRANIRFRPEPKAKPEFVHTLNGSGLAVGRTVAAILENYQQEDGSVVIPEVLRPYM 418 Query: 418 NNLAVIKKEH 427 NL I K + Sbjct: 419 GNLQKITKRN 428 >gi|326789959|ref|YP_004307780.1| seryl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326540723|gb|ADZ82582.1| seryl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 427 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 187/425 (44%), Positives = 269/425 (63%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +R++ E + AL KR + LD K R L++++E ++R+N+ S QI Sbjct: 1 MLDIKLLREDLEGVKAALAKRSGNYNLDEFTELDVKRRTLLQEVEAHKSRQNAVSKQIPA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E L +++ +L+ E E+ + ++ +PN+P VP+G Sbjct: 61 MKKAG--EDTTAIFAEMKQLSDEVKVLDAEVKEIDEKISNIVMRLPNLPNPLVPVGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R +G+ + + H+++GE L ++DF++A K++G+RF G A LERA+ Sbjct: 119 ENFEMRKIGEPRNFDFEIKAHWDLGENLDILDFEKAAKVTGSRFVFYKGLGARLERAIMN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+D+H +HGYTEV PL+V +M GTGQ+PKF +D F D + IPT+EV +TN+ Sbjct: 179 FMLDMHVDKHGYTEVFPPLMVNRASMTGTGQLPKFEEDAFKVVDTDYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y +I++ K L ++ P FR+EAGSAGRDTRG++RQHQF K E+V T+ EDS+ E Sbjct: 239 YRDQILDGKDLVIKHCAYTPCFRAEAGSAGRDTRGIIRQHQFNKVEMVKFTKPEDSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AE+ILK L L YRVV LCTGDLGFS+ TYD+EVW+ Y EISSCS +F Sbjct: 299 EKLTNDAEDILKTLGLPYRVVRLCTGDLGFSSAMTYDIEVWMPSYGRYVEISSCSDFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +++D +F HTLNGSG+AVGR AILEN+ ADGSV IP LRPYM Sbjct: 359 QARRANIKFKDNKEDKARFVHTLNGSGLAVGRTTAAILENFQQADGSVIIPEALRPYMGG 418 Query: 420 LAVIK 424 + I+ Sbjct: 419 IEKIE 423 >gi|327438151|dbj|BAK14516.1| seryl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 430 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 186/429 (43%), Positives = 265/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R N E + L R+ + + SLD K R LI K E ++A RN S QI Sbjct: 1 MLDIKRVRDNFEEVKRMLLTRNEDLGNLDNFESLDTKRRELIAKTEVLKAERNKVSEQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N + + +++ L+ E + + K ++ +PN+P E VP+GT Sbjct: 61 VMKR--NKEDASEVIARMREVGDEIKALDAELNAIEDEFKDMMMRLPNIPHESVPVGTEE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ + G P+ ++ H++I + L ++DF+R K++G+RF G A LERAL Sbjct: 119 DDNVEEYTWGDVPAFNFEAKAHWDIAKELDIVDFERGAKVTGSRFLFYKGLGARLERALL 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEV 234 FM+DLH+ +HGYTE+ P +V +++ GTGQ+PKF +D+F +LIPT+EV Sbjct: 179 NFMMDLHSDQHGYTEMLPPQIVNRDSLTGTGQLPKFEEDVFKLVREEDEMDYYLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TN Y EI+ + LP F+ + +FRSEAGSAGRDTRG++RQHQF K ELV + E+ Sbjct: 239 PVTNYYRDEILSADMLPQAFSAFSANFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEE 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S+ + E + AE++L+ L L YR + +CT DLGF+A K YDLEVW+ QN+YREISSCS Sbjct: 299 SYEQLEILTGHAEKVLQLLGLPYRKLKMCTADLGFTAAKKYDLEVWIPAQNMYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR N R+R +F HTLNGSG+A+GR + AILENY DGSV IP VLR Sbjct: 359 NFEDFQARRANIRFRREAGAKPEFVHTLNGSGLAIGRTVAAILENYQQEDGSVVIPEVLR 418 Query: 415 PYMNNLAVI 423 PYM + VI Sbjct: 419 PYMGGVEVI 427 >gi|330972886|gb|EGH72952.1| seryl-tRNA synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 426 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 273/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDGIQAELDALVLSIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G S ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTSFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I +DS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 AALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIGVPEVLKPY 418 Query: 417 MNNLAVI 423 M L VI Sbjct: 419 MGGLEVI 425 >gi|237793335|ref|YP_002860887.1| seryl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|259511662|sp|C3KXS1|SYS_CLOB6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|229262324|gb|ACQ53357.1| serine--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 426 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 184/428 (42%), Positives = 267/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR N + AL R + + +L LDE+ R ++ K+E ++++RN S++ Sbjct: 1 MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + EG V + E L E++ + ++ ++ ++ IPN+P +VP G Sbjct: 61 VPKLKKEGK--DVSNIVAEMKNLSEEIKGFDATLAKIDEKIQYIMLRIPNIPNPQVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +NI IR+ + + H++IG L ++DF RA K++G+RF+ G A LERA Sbjct: 119 TDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFQRAGKVTGSRFTFYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT +HGY E+ P +V +M GTGQ+PKF +D F ++ + IPT+EV + Sbjct: 179 VISYFLDTHTEKHGYIEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY E+++ LPL+ + FRSEAGSAGRDTRG++RQHQF K ELV T+ E S+ Sbjct: 239 TNLYRDEVLKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE +LK L + YRVV +C GDLGF+A YDLEVW+ N Y EISSCS Sbjct: 299 DELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ + ++ HTLNGSGVA+GR + AILENY N DGSVTIP VLRPY Sbjct: 359 EDFQARRANIRYKEDSKAKPQYVHTLNGSGVAIGRTVAAILENYQNEDGSVTIPEVLRPY 418 Query: 417 MNNLAVIK 424 M IK Sbjct: 419 MGGKEAIK 426 >gi|226947237|ref|YP_002802328.1| serine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] gi|254783018|sp|C1FPI7|SYS_CLOBJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226841928|gb|ACO84594.1| serine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 426 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 185/428 (43%), Positives = 268/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR N + AL R + + +L LDE+ R ++ K+E ++++RN S++ Sbjct: 1 MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNKVSSE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + EG V + E L E++ + ++ ++ ++ IPN+P +VP G Sbjct: 61 VPKLKKEGK--DVSNIVAEMKNLSEEIKGFDVTLAKIDEKIQYIMLRIPNIPNPQVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +NI IR+ + + H++IG L ++DF+RA K++G+RF+ G A LERA Sbjct: 119 TDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT +H YTE+ P +V +M GTGQ+PKF +D F ++ + IPT+EV + Sbjct: 179 VISYFLDTHTEKHDYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EI++ LPL+ + FRSEAGSAGRDTRG++RQHQF K ELV T+ E S+ Sbjct: 239 TNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE +LK L + YRVV +C GDLGF+A YDLEVW+ N Y EISSCS Sbjct: 299 EELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ ++ HTLNGSGVA+GR + AILENY + DGSVTIP VLRPY Sbjct: 359 EDFQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILENYQSEDGSVTIPEVLRPY 418 Query: 417 MNNLAVIK 424 M VIK Sbjct: 419 MGGREVIK 426 >gi|167563728|ref|ZP_02356644.1| seryl-tRNA synthetase [Burkholderia oklahomensis EO147] Length = 433 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 197/430 (45%), Positives = 273/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R SL+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSSLEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + E+ + L L+ +PN+P E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKASAVKLDEIQARLSDLMLQMPNLPHESVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF+VL G +A L RAL Q Sbjct: 119 ENVEVRRWGAPRQFDFDVKDHVDVGTPLG-LDFETGAKLSGARFTVLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V + +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMLDTHTLQHGYSETYTPYIVNPDVLYGTGQLPKFADDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I + Sbjct: 238 ISLTNTVRDTIVDAAALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L+L YRV++LCTGD+GF+A KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAETILQKLELPYRVITLCTGDMGFAAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPVAL 416 Query: 414 RPYMNNLAVI 423 RPYM + I Sbjct: 417 RPYMGGVERI 426 >gi|161486631|ref|NP_934118.2| seryl-tRNA synthetase [Vibrio vulnificus YJ016] gi|46577168|sp|Q7MLV2|SYS_VIBVY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase Length = 435 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 192/434 (44%), Positives = 266/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIGKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++ G+ + +K + +L L + + E V + L +I +PN+P +EVP G N Sbjct: 61 LMSAGDKEGAEKIKQQIGSLGSDLDVKKIELDAVMAQLDDIILSVPNIPADEVPNGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ S ++H ++GE +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 DNLEISRWGEPKSYDFELKDHVDLGEMGDGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGKDLFHTEPLTEKASDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ QN YRE Sbjct: 301 TKPEDSMNALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSHKTYDLEVWVPAQNTYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 PTVL+ YM I Sbjct: 421 PTVLQKYMGGATHI 434 >gi|322386847|ref|ZP_08060471.1| serine--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321269129|gb|EFX52065.1| serine--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 446 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 277/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R + + +DE+ R L+ K+E+++A RN+ SA+I Sbjct: 22 MLDLKRIRTDFDAVAEKLATRGVAADVLNQMKEIDEQRRDLLVKVENLKAERNTVSAEIA 81 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L Q+ L+ E+ + L + + +PN+P + VP+G Sbjct: 82 QAKR--NKENADDKIAAMQKLSAQVKDLDATLAELDAKLTEFTTTLPNIPHDSVPVGADE 139 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 140 DDNVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 199 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 200 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 258 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 259 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 318 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 319 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 378 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 379 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 438 Query: 419 NLAVIKKE 426 L VI + Sbjct: 439 GLEVIAPK 446 >gi|118443475|ref|YP_879284.1| seryl-tRNA synthetase [Clostridium novyi NT] gi|166219868|sp|A0Q3T2|SYS_CLONN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|118133931|gb|ABK60975.1| seryl-tRNA synthetase [Clostridium novyi NT] Length = 426 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 190/428 (44%), Positives = 278/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR NPE + ++ R + + +++LDE+ R ++ ++E ++++RNS S+Q Sbjct: 1 MLDLKRIRNNPEEIKQIMQNRGEDFDNKLIDDVVALDERRRQILVEVEQLKSKRNSESSQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ EG + A+ + L + + + E +EV +K ++ IPN+P VP G Sbjct: 61 IGKLKKEGKDT--SAIMADMKKLSDDIKAFDVELNEVDEKIKYIMLRIPNIPNPNVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +NI IR G+ S+ H++IG L ++DF+R K++G+RF+V G A LERA Sbjct: 119 TDEDNIEIRKWGEPTKFDFESKAHWDIGTDLDILDFERGGKIAGSRFTVYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D+HT +HGYTE+ P +V ++M GTGQ+PKF +D F + + IPT+EV + Sbjct: 179 IINYFLDMHTIDHGYTEILPPYMVNRDSMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y +EI+ LP++ + FR+EAGSAGRDTRG++RQHQF K ELV + E S+ Sbjct: 239 TNMYRNEILNGDDLPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKVELVKFVKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE++LK L L YRVV +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 DELEKLTNDAEDVLKGLGLPYRVVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ +F HTLNGSGVA+GR + AILENY N DG+VTIP LRPY Sbjct: 359 EDFQARRANIRYKENGKGKPEFIHTLNGSGVAIGRTVAAILENYQNEDGTVTIPEALRPY 418 Query: 417 MNNLAVIK 424 M NL VIK Sbjct: 419 MRNLDVIK 426 >gi|221633715|ref|YP_002522941.1| seryl-tRNA synthetase [Thermomicrobium roseum DSM 5159] gi|254783499|sp|B9L131|SYS_THERP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|221156826|gb|ACM05953.1| seryl-tRNA synthetase [Thermomicrobium roseum DSM 5159] Length = 445 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 189/427 (44%), Positives = 270/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR++P+ + AL+K + E + IL LDE+ R L+ ++E ++A+RN+ S +IGQ Sbjct: 1 MLDLRLIREHPDLVREALRKLNTEAPLDEILELDERRRQLVAEVEQLKAQRNAESKRIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +A L +++ L++E + L+ L+ +PN+P +VP+G + Sbjct: 61 LPA---GPEREATIAAMRALGDRIEALDRELAAIEERLQALLLEVPNLPDPDVPVGPDES 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+++R G+ + H+E+ E LGL+DF R K++G+RF VL G LA L+RAL Sbjct: 118 GNVVVRHWGEPRPFDFPVKPHWELAEELGLIDFARGVKIAGSRFYVLRGDLARLQRALIA 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 +MIDLH +EHGY EV P LVR EAM GTG +PKF D+++ WLIPT+EV +TNL Sbjct: 178 WMIDLHVNEHGYLEVYPPFLVRREAMIGTGNLPKFGDNLYHDEETDLWLIPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ SLP+ P FR E SAGRD RG+ R HQF K E+V + S E Sbjct: 238 FRDEILPPGSLPIYLVAATPCFRKERVSAGRDVRGIKRVHQFEKVEMVKFVEPDRSDEEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +R+++ AE++L+RL+L YRVV +CTGDL F+A K +DLEVW G + E+SSCS +F Sbjct: 298 QRLVADAEDVLRRLELPYRVVQMCTGDLSFTAAKKFDLEVWAPGSQEWLEVSSCSNFRDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYR +F HTLNGSG+A+ R LIAI+ENY DG++ IP VLRPYM Sbjct: 358 QARRANIRYRPSEGARPQFVHTLNGSGLALPRTLIAIMENYQQPDGTIEIPAVLRPYMGG 417 Query: 420 LAVIKKE 426 I ++ Sbjct: 418 QQRIGRQ 424 >gi|269960798|ref|ZP_06175169.1| seryl-tRNA synthetase [Vibrio harveyi 1DA3] gi|269834462|gb|EEZ88550.1| seryl-tRNA synthetase [Vibrio harveyi 1DA3] Length = 435 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 191/434 (44%), Positives = 264/434 (60%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + + I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVDTIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E +V + L + +PN+P +EVP G N Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELEQVMAQLDEFTLSVPNIPADEVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ S ++H ++GE +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKSYDFELKDHVDLGEMGDGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLVEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I + LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTISDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 PTVL+ YM I Sbjct: 421 PTVLQKYMAGATHI 434 >gi|238795841|ref|ZP_04639354.1| Seryl-tRNA synthetase [Yersinia mollaretii ATCC 43969] gi|238720304|gb|EEQ12107.1| Seryl-tRNA synthetase [Yersinia mollaretii ATCC 43969] Length = 430 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 267/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + E + +E+ ++L + E ++A RN+ S IG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGFKLDVEMLRQQEERRKVLQVETESLQAERNARSKLIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNVLGEKLDAAKIELDKLQNEIRDLALSIPNLPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ R+H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNLEVSRWGEPRKYDFEVRDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQVARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPLTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVWL QN YREISS Sbjct: 299 EDSMAALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSSKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R+ + + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRNKIDRKPRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLEFI 429 >gi|83645246|ref|YP_433681.1| seryl-tRNA synthetase [Hahella chejuensis KCTC 2396] gi|123533541|sp|Q2SJB8|SYS_HAHCH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|83633289|gb|ABC29256.1| seryl-tRNA synthetase [Hahella chejuensis KCTC 2396] Length = 427 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 197/426 (46%), Positives = 272/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + + LK + + + L+E+ + + + E++++ RNS S IG Sbjct: 1 MLDPKLLRNSLDEVAARLKTKRYDLDVDAFSQLEERRKSVQVRTEELQSERNSKSKNIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 I +G LK+E + + EQL + E ++ L L+ IPN+P VP G S + Sbjct: 61 MIKQGQDP--QPLKDEVAKIGEQLETAKAELQDIQDKLDDLLQGIPNLPDASVPEGASED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++GE+LGL+DF+ KL+G+RF V+ LA L RAL Q Sbjct: 119 DNVEVRQWGSVREFDFEPKDHVDLGESLGLLDFNSGAKLAGSRFVVMRRELARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D+HT+EHGY E P LV A+ GTGQ+PKF D+F +LIPT+EV +TN Sbjct: 179 FMLDIHTTEHGYQETMTPFLVHAHALQGTGQLPKFEADLFKVPGEHDFYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L EI+++K LPL+ T+ P FRSEAGS GRD RGM+RQHQF K EL+ + E S Sbjct: 239 LVREEILDAKELPLKMTSHTPCFRSEAGSYGRDVRGMIRQHQFEKVELIHVVAPEQSDAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE IL+ L+L YRVV+LC GDLGFSA KTYD+EVWL Q YREISSCS C + Sbjct: 299 LEELTGNAERILQLLNLPYRVVALCGGDLGFSAAKTYDIEVWLPAQKKYREISSCSNCRD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R+P + + HTLNGSG+A+GR LIA+LENY ADGS+ +P VL PYM Sbjct: 359 FQARRMQARWRNPETGKPELVHTLNGSGLAIGRTLIAVLENYQQADGSILVPDVLEPYMG 418 Query: 419 NLAVIK 424 + VIK Sbjct: 419 GVKVIK 424 >gi|148378026|ref|YP_001252567.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153931011|ref|YP_001382425.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153937253|ref|YP_001385977.1| seryl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|166219865|sp|A7FQ53|SYS_CLOB1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166219866|sp|A5HXR1|SYS_CLOBH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|148287510|emb|CAL81569.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152927055|gb|ABS32555.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152933167|gb|ABS38666.1| serine--tRNA ligase [Clostridium botulinum A str. Hall] Length = 426 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 185/428 (43%), Positives = 268/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR N + +L R + + +L LDE+ R ++ K+E ++++RN S++ Sbjct: 1 MLDLKRIRNNSNEIKESLNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + EG V + E L E++ + ++ ++ ++ IPN+P +VP G Sbjct: 61 VPKLKKEGK--DVSNIVAEMKNLSEEIKGFDTTLAKIDEKIQYIMLRIPNIPNPQVPDGD 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +NI IR+ + + H++IG L ++DF+RA K++G+RF+ G A LER+ Sbjct: 119 TDEDNIEIRNWSEPTKFDFEPKAHWDIGSNLNILDFERAGKVTGSRFTFYKGLGARLERS 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 L + +D HT +HGYTE+ P +V +M GTGQ+PKF +D F ++ + IPT+EV + Sbjct: 179 LISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EI++ LPL+ + FRSEAGSAGRDTRG++RQHQF K ELV T+ E S+ Sbjct: 239 TNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE +LK L + YRVV +C GDLGF+A YDLEVW+ N Y EISSCS Sbjct: 299 EELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ ++ HTLNGSGVA+GR + AILENY N DGSVTIP VLRPY Sbjct: 359 EDFQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILENYQNEDGSVTIPEVLRPY 418 Query: 417 MNNLAVIK 424 M IK Sbjct: 419 MGGKEAIK 426 >gi|92114436|ref|YP_574364.1| seryl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] gi|122419603|sp|Q1QV43|SYS_CHRSD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|91797526|gb|ABE59665.1| seryl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] Length = 425 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 189/425 (44%), Positives = 258/425 (60%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L +R + + +L+ + R L + E ++ RN+ S IGQ Sbjct: 1 MLDPKLLRSDLPLVAERLARRGFTLDTARLEALESRRRELQTETERLQNERNTRSKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L +E S L E+L + EV + + ++ +PN+P + VP G Sbjct: 61 AKASG--EDIQPLLDEVSDLGERLDAAKARLAEVQAEWDESVAALPNLPHDSVPQGLDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G + R+H ++G G +DF+ A KL+G+RF+V+ G +A L RAL Q Sbjct: 119 DNVELHRWGTPGTFDFEVRDHVDLGAKFGYLDFEMAAKLTGSRFAVMRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+D T EHGY E P +V D ++ GTGQ+PKF +D+F +LIPT+EV LTN Sbjct: 179 FMLDKQTREHGYEECYVPYIVNDASLTGTGQLPKFGEDLFKLEGDHDFYLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I LPL+ T P FRSEAG+ GRDTRGM+RQHQF K E+V I S+ Sbjct: 239 IAREQIFTPAELPLKLTAHTPCFRSEAGAYGRDTRGMIRQHQFDKVEMVQIVDPATSYDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L+L YRVV+LC GD+GF A KTYDLEVWL Q YREISS S C + Sbjct: 299 LESMRGHAEAILQALELPYRVVTLCAGDMGFGAAKTYDLEVWLPSQETYREISSISNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R R P K + HTLNGSG+AVGRCL+A+LEN ADGS+ IP VLR YM+ Sbjct: 359 FQARRMQARMRHPEQKKPQLVHTLNGSGLAVGRCLLAVLENCQQADGSIVIPEVLRGYMD 418 Query: 419 NLAVI 423 + I Sbjct: 419 GVERI 423 >gi|27366222|ref|NP_761750.1| seryl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|320156734|ref|YP_004189113.1| seryl-tRNA synthetase [Vibrio vulnificus MO6-24/O] gi|30173149|sp|Q8D8M6|SYS_VIBVU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|27362422|gb|AAO11277.1| seryl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|319932046|gb|ADV86910.1| seryl-tRNA synthetase [Vibrio vulnificus MO6-24/O] Length = 435 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 192/434 (44%), Positives = 265/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIGKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++ G+ + +K + +L L + E V + L +I +PN+P +EVP G N Sbjct: 61 LMSAGDKEGAEKIKQQIGSLGSDLDAKKIELDAVMAQLDDIILSVPNIPADEVPNGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ S ++H ++GE +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 DNLEISRWGEPKSYDFELKDHVDLGEMGDGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGKDLFHTEPLTEKASDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF + KTYDLEVW+ QN YRE Sbjct: 301 TKPEDSMNALEELTGHAEKVLQLLELPYRKVLLCTGDMGFGSHKTYDLEVWVPAQNTYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 PTVL+ YM I Sbjct: 421 PTVLQKYMGGATHI 434 >gi|319776729|ref|YP_004139217.1| Seryl-tRNA synthetase [Haemophilus influenzae F3047] gi|317451320|emb|CBY87558.1| Seryl-tRNA synthetase [Haemophilus influenzae F3047] Length = 429 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 194/431 (45%), Positives = 262/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RNS S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNSRSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMDDMGNQLTEAKTQLDAVLAEINQIALNIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHVTLGEEANGLDFAAGAKLTGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLDVIGK 429 >gi|91226055|ref|ZP_01260982.1| seryl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|269967795|ref|ZP_06181842.1| seryl-tRNA synthetase [Vibrio alginolyticus 40B] gi|91189496|gb|EAS75773.1| seryl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|269827615|gb|EEZ81902.1| seryl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 435 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 191/434 (44%), Positives = 264/434 (60%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + + I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVDTIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E +V + L + +PN+P +EVP G N Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELEQVMAQLDEFTLSVPNIPADEVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ S ++H ++GE +DF A K++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKSYDFELKDHVDLGEMGDGLDFASAVKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I + LP++ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTISDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 PTVL+ YM I Sbjct: 421 PTVLQKYMAGATHI 434 >gi|294651243|ref|ZP_06728571.1| serine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] gi|292822896|gb|EFF81771.1| serine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] Length = 423 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 190/425 (44%), Positives = 270/425 (63%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ + L+ + + L K E+++A RN+ + Q+GQ Sbjct: 1 MIDPKLLRNNIEVVNAALAKRGIQLNVQEWADLEARRKDLQSKAENLQAERNAGAKQVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + + +++ E E+ + L++ IPN+P E VP G + Sbjct: 61 IKKSGG--DASEIMARMAAIGDEIKAAEVALAELQTELEQKSLAIPNLPDESVPFGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 119 DNLEILKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV + + GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDTHTLKNGYTEAYVPYLVNADTLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL+++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 239 FVRDEIIDADRLPLKYSAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPEHSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 299 LEELTAHAEGILQALGLPYRKILLCGGDMGFGAVKTYDLEVWVPSQNTYREISSCSNMGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K ++ HTLNGSG+AVGR L+A++ENY ADGS+ IP VLRPYM Sbjct: 359 FQARRMKARYR-VDQKKIELVHTLNGSGLAVGRTLLAVMENYQRADGSIEIPEVLRPYMG 417 Query: 419 NLAVI 423 + I Sbjct: 418 GITYI 422 >gi|298369230|ref|ZP_06980548.1| serine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] gi|298283233|gb|EFI24720.1| serine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] Length = 431 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 273/431 (63%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + L +R E + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQQLRSHTAAVAERLAQRGYEFDTARFNALEEQRKAVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWLLSIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMKGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + I+ LPL+ T +P FRSEAG+ G+D RG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIVAGSDLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSINIPAAL 418 Query: 414 RPYMNNLAVIK 424 +PYM +A ++ Sbjct: 419 QPYMGGVAKLE 429 >gi|113970304|ref|YP_734097.1| seryl-tRNA synthetase [Shewanella sp. MR-4] gi|114047505|ref|YP_738055.1| seryl-tRNA synthetase [Shewanella sp. MR-7] gi|117920498|ref|YP_869690.1| seryl-tRNA synthetase [Shewanella sp. ANA-3] gi|122943831|sp|Q0HIS7|SYS_SHESM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123030620|sp|Q0HV57|SYS_SHESR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166223289|sp|A0KWW5|SYS_SHESA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|113884988|gb|ABI39040.1| seryl-tRNA synthetase [Shewanella sp. MR-4] gi|113888947|gb|ABI42998.1| seryl-tRNA synthetase [Shewanella sp. MR-7] gi|117612830|gb|ABK48284.1| seryl-tRNA synthetase [Shewanella sp. ANA-3] Length = 428 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 204/429 (47%), Positives = 262/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R L R ++ L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELAVTAERLATRGFILDVAHLTQLEEKRKSLQVATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G VDA+ + L QL + E V + + +PN+P E PIG Sbjct: 61 AKARG--EDVDAIMAQVGDLGAQLDAKKVELAAVLEEVNAIAMSMPNLPDESAPIGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ IR G S ++H ++GE L +DF A K++G+RF V+ G +A L RALGQ Sbjct: 119 ENVEIRRWGTPRSFDFPVKDHIDLGEGLNGLDFKSAVKITGSRFIVMKGQIARLNRALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV + ++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I++ LP++ T FRSEAGS G+DTRG++RQHQF K ELV + + ED Sbjct: 239 PLTNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE +L+RL L YR V LCTGD+GF + KTYD+EVWL GQN YREISSCS Sbjct: 299 SMAALEALTGHAETVLQRLGLPYRTVILCTGDMGFGSSKTYDIEVWLPGQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR HTLNGSG+AVGR L+AILENY NADGSVTIP LR Sbjct: 359 NMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSVTIPEALR 418 Query: 415 PYMNNLAVI 423 PYM L I Sbjct: 419 PYMGGLTQI 427 >gi|158319073|ref|YP_001511580.1| seryl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|166987308|sp|A8MEB3|SYS_ALKOO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|158139272|gb|ABW17584.1| seryl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 425 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 185/427 (43%), Positives = 270/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR N + + A+ +R + + +++LDEK R L++++E ++ +N+ S ++ Sbjct: 1 MLDIKRIRNNLDEIKAAMARRGEKDFDLDAVVALDEKRRELLQQVELMKNEQNTVSKEVP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG + L ++ L+ + EV L+ + IPNVP +VP G + Sbjct: 61 KLKKEGK--DATEVMARMKELSGKIKELDGQVKEVEDQLEYTLLRIPNVPHPDVPQGETD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++NI +R + + H++I LG++DF+ A+K++GARF++ G A LERAL Sbjct: 119 DDNIEVRKWSEPTHFDFEPKAHWDIATDLGIIDFEAASKITGARFALYKGVGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH EHGYTEV P +V +M GTGQ+PKF +D F + +PT+EV +TN Sbjct: 179 NFMLDLHIEEHGYTEVLPPFMVNRSSMTGTGQLPKFEEDAFKLPQKDYFLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EIIE +LPL + P FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEIIEGANLPLSYVAYTPCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYAE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE++L+ L++ YR+V +CTGDLGF+A YD+EVW+ N Y EISSCS + Sbjct: 299 LEKLTNNAEKVLQLLEIPYRIVRICTGDLGFTAAFKYDIEVWMPSYNRYVEISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR ++F HTLNGSG+AVGR + AILEN + +G+V IP L PYM Sbjct: 359 FQARRANIRYRPEEKGKVEFLHTLNGSGLAVGRTVAAILENCQDDEGNVKIPEALIPYMR 418 Query: 419 NLAVIKK 425 + VI K Sbjct: 419 GIKVITK 425 >gi|323498308|ref|ZP_08103310.1| seryl-tRNA synthetase [Vibrio sinaloensis DSM 21326] gi|323316736|gb|EGA69745.1| seryl-tRNA synthetase [Vibrio sinaloensis DSM 21326] Length = 435 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 190/434 (43%), Positives = 268/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E EV + L+++ +PN+P ++VP G + Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELDEVMAKLEEITLSVPNLPADDVPAGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ + ++H ++GE G +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKTYDFELKDHVDLGELGGGLDFASATKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTDEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLEEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ E+S E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEESMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM I Sbjct: 421 PAVLQKYMGGATHI 434 >gi|170717819|ref|YP_001784880.1| seryl-tRNA synthetase [Haemophilus somnus 2336] gi|189083572|sp|B0UUT7|SYS_HAES2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|168825948|gb|ACA31319.1| seryl-tRNA synthetase [Haemophilus somnus 2336] Length = 429 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 265/431 (61%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK +R + L+E+ + L K E ++A RNS S IG Sbjct: 1 MIDPTLLRNNLSEIAEKLKVRRGFILDVDKFSQLEEQRKTLQIKTETLQAERNSRSKTIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + +L +++E V + +++L IPN+P +EVP+G Sbjct: 61 AAKARG--EDISTLLAEVDHMGAELNTVKEELANVLTEIEQLALTIPNIPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N + G ++H +GE LG +DF KLSGARF+V+ G +A + RAL Sbjct: 119 SDNKEVFRWGTPKKFDFEVKDHVALGEILGGLDFAAGVKLSGARFAVIKGQIARMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEV 234 QFM+DLHT +HGYTE P LV +YGTGQ+PKF +++F LIPT+EV Sbjct: 179 QFMLDLHTEQHGYTEAYVPYLVNHTTLYGTGQLPKFGEELFHIKPLENEQTYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K ELV I E Sbjct: 239 PVTNLVRDEIIDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVEPEK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTNQAEKVLQLLNLPYRKVLLCTGDMGFGATKTYDLEVWIPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R R K + HTLNGSG+AVGR L+AILENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCRAKGDKKTRLVHTLNGSGLAVGRTLVAILENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYMN + +I K Sbjct: 419 PYMNGIEIIGK 429 >gi|291280329|ref|YP_003497164.1| seryl-tRNA synthetase [Deferribacter desulfuricans SSM1] gi|290755031|dbj|BAI81408.1| seryl-tRNA synthetase [Deferribacter desulfuricans SSM1] Length = 425 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 194/428 (45%), Positives = 276/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++++ N + + KR E + +L LD+K R I+K+E+++ RN S +IG Sbjct: 1 MLDLRFVISNIDLVKDKTAKRGYTEIDLDNLLILDKKRRETIQKVEELKKERNEKSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E S L+ +KE++ IL+ + E+ + ++ IPN+ + VPIG Sbjct: 61 KLKREKKDS--SHLEQRVKAIKEEIEILDNKLKEIEEQINYILLRIPNLIDDSVPIGEDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+L + G K + H++I E L ++DF+R KL+ +RFS+ G A LERAL Sbjct: 119 SANVLYKEWGAKRDFSFNPKPHWDIAEKLDIVDFERGVKLAKSRFSLYKGTGAKLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTN 238 FM+D+ SE+GY E+ P LV ++ M GTGQ+PKF +++F C D +LIPT+EV +TN Sbjct: 179 NFMLDVQ-SENGYQEIIPPFLVNEKTMTGTGQLPKFEEELFKCERDNLYLIPTAEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y+ EI+ LPL T P FR EAGS G+D RG++RQHQF K ELV I + EDS E Sbjct: 238 IYADEILSEDDLPLYMTAYTPCFRREAGSHGKDVRGLIRQHQFNKVELVKIVKPEDSDEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++L AE+IL+ L++ YRV++LC+GDLGFSA KTYD+EVWL G Y+EISSCS + Sbjct: 298 LEKLLLDAEKILQLLEIPYRVMTLCSGDLGFSAAKTYDIEVWLPGLGTYKEISSCSNFKD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQSRR N ++R ++K ++ HTLNGSG+AVGR +AILENY DGSV +P VLR YM Sbjct: 358 FQSRRANIKFRRKDTKKTEYPHTLNGSGLAVGRTFLAILENYQQEDGSVVVPEVLRKYMG 417 Query: 419 NLAVIKKE 426 + VIK E Sbjct: 418 GIEVIKPE 425 >gi|254465472|ref|ZP_05078883.1| seryl-tRNA synthetase [Rhodobacterales bacterium Y4I] gi|206686380|gb|EDZ46862.1| seryl-tRNA synthetase [Rhodobacterales bacterium Y4I] Length = 430 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 207/429 (48%), Positives = 280/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D A+ +R S IL+LDE R I E +A +N S ++G Sbjct: 1 MHDIRAIRENPAAFDAAVARRGDAGVSSGILALDEARRAKILAAETAQAEQNKASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ + + L+ + K ++ + E E+ L +++ IPN+P ++VP G Sbjct: 61 AKGRGDEAEFERLRALVAEKKAEVAAMNTEAKELDQQLNDMLATIPNLPFDDVPDGADEV 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ + ++EHFEI MDF+ A KLSG+RF VL+G +A + RAL Q Sbjct: 121 DNVEIRRWGEPKALEFEAKEHFEIEGVKPGMDFEVAAKLSGSRFVVLSGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMI+ H E+G TE P+LVR+E MYGTGQ+PKF +D + TTDG WL+PT+EV+LTN+ Sbjct: 181 FMINTHVDENGLTETWTPVLVREEMMYGTGQLPKFGEDSYKTTDGWWLVPTAEVTLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + ++E LP R+ FRSEAGSAG+DT GMLRQHQF K E+VS+T + S EHE Sbjct: 241 NGLVVEEGYLPRRYVAHTQCFRSEAGSAGKDTAGMLRQHQFEKVEMVSVTHPDKSIEEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE+IL+RL L YR + LCTGD+GF A KT+D+EVW+ GQN YREISS S CG+FQ Sbjct: 301 RMTRCAEDILERLGLPYRTIVLCTGDMGFGARKTHDIEVWVPGQNTYREISSVSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +R++ + +F HTLNGSG+AVGRCLIA+LEN ADGSV +P VL PY+ Sbjct: 361 ARRMTARFKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVKLPEVLAPYLGGK 420 Query: 421 AVIKKEHIL 429 + E L Sbjct: 421 LTLSAEGEL 429 >gi|187929624|ref|YP_001900111.1| seryl-tRNA synthetase [Ralstonia pickettii 12J] gi|309781610|ref|ZP_07676344.1| serine--tRNA ligase [Ralstonia sp. 5_7_47FAA] gi|238691803|sp|B2U9Y5|SYS_RALPJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|187726514|gb|ACD27679.1| seryl-tRNA synthetase [Ralstonia pickettii 12J] gi|308919585|gb|EFP65248.1| serine--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 438 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 201/440 (45%), Positives = 274/440 (62%), Gaps = 19/440 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + LK R +L+ + + + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDIDAVAARLKDRGYVLDVAGFAALEAERKAIQTRTEELQARRNSLSKQIGV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + E S + ++L + V + L+ L+ IPN+P E VP G Sbjct: 61 LKGKG--EDASGVMAEVSGIGDELKASAAQLDVVQAKLQDLMLSIPNLPHESVPAGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H ++G ALG +DFD KLSGARF+VL G +A L RAL Q Sbjct: 119 QNVEVRREGTPRTFDFPVKDHVDLGAALG-LDFDAGAKLSGARFTVLKGQVARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------------G 225 FM+D HT EHGYTE P +V +M GTGQ+PKF +D+F Sbjct: 178 FMLDTHTLEHGYTEAYVPYIVNAASMRGTGQLPKFEEDLFRVPRKMGHSAEEGDGERVEN 237 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPT+EV LTNL EI+ + +LP+ F +P FRSEAGS G+DTRGM+RQHQF K E Sbjct: 238 FYLIPTAEVPLTNLVRDEIVAADTLPMMFAAHSPCFRSEAGSYGKDTRGMIRQHQFDKVE 297 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I + E S E M +CAE IL++L+L +R V LCTGD+GF + KTYD+EVW+ QN Sbjct: 298 MVQIVQPETSAAALEAMTNCAENILRKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQN 357 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISSCS G+FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADG Sbjct: 358 TYREISSCSNMGDFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVALLENYQNADG 416 Query: 406 SVTIPTVLRPYMNNLAVIKK 425 SVT+PT LRPY+ V+K Sbjct: 417 SVTVPTALRPYLGGQEVLKP 436 >gi|88860149|ref|ZP_01134788.1| seryl-tRNA synthetase [Pseudoalteromonas tunicata D2] gi|88818143|gb|EAR27959.1| seryl-tRNA synthetase [Pseudoalteromonas tunicata D2] Length = 434 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 193/436 (44%), Positives = 274/436 (62%), Gaps = 13/436 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++RQ+ + L R I +L+E+ + L K +D++ RN+ S IGQ Sbjct: 1 MLDSKYLRQDIDEAAARLASRGFTLDVAQINALEEQRKALQIKTQDLQNERNTRSKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ + L ++L + + ++ ++L + + +PN+P VP G + Sbjct: 61 AKARG--EDIEPLRAQVGHLGDELDAAKIAQDQILATLHDISASLPNLPDSSVPSGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGL-MDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ + G ++H ++GE+L +DF+ KLSGARF+V+ G +A + RAL Sbjct: 119 DNVEVLKWGTPKQFDFEVKDHVDLGESLNKGLDFEAGVKLSGARFTVMRGQIARMHRALV 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----------TDGRWLI 229 QFM+D H+ ++GYTE+ P LV ++++GTGQ+PKFA+D+F T DG LI Sbjct: 179 QFMLDTHSDKNGYTEMYVPYLVNKDSLFGTGQLPKFAEDLFHTKGLVNDDGVEQDGFSLI 238 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN EI + LP++ T P FRSEAGS GRDTRG++RQHQF K ELV + Sbjct: 239 PTAEVPLTNCARDEIYDEADLPIKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQL 298 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + EDS E + AE+IL+ L+L YR V LCTGD+GF + KTYDLEVWL QN YRE Sbjct: 299 VKPEDSMAALEELTGHAEQILQALELPYRKVILCTGDMGFGSAKTYDLEVWLPAQNTYRE 358 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR L+AILENY ADGS+ + Sbjct: 359 ISSCSNMVDFQARRMQARFRRQGEKKPELLHTLNGSGLAVGRTLVAILENYQQADGSIVV 418 Query: 410 PTVLRPYMNNLAVIKK 425 PTVL+ YM + VI K Sbjct: 419 PTVLQGYMGGVTVISK 434 >gi|290473945|ref|YP_003466819.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Xenorhabdus bovienii SS-2004] gi|289173252|emb|CBJ80027.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Xenorhabdus bovienii SS-2004] Length = 429 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 190/430 (44%), Positives = 260/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R E + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGYTLDVETLCKQEERRKVLQVETETLQAERNSRSKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + + E + + +++L +PN+P + P G + Sbjct: 61 AKARG--EDIEPLRQEVNQLGEKLDLAKAELETLQAEIRELALRMPNIPDDSSPYGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I G+ ++H +GE +DF A KL+G+RF V+ G +A L RAL Q Sbjct: 119 DNQEISRWGEPRQYGFEVKDHVALGELTNGLDFAAAVKLTGSRFVVMKGQIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+DLHT +HGY E P LV E +YGTGQ+PKF +D+F T LIPT+E Sbjct: 179 FMLDLHTEQHGYLETYVPYLVNHETLYGTGQLPKFGEDLFHTNPLEEETGSNYALIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL +I++ +LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I E Sbjct: 239 VPVTNLVRGDILDESALPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKIELVQIAHPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E + AE++L+ L L YR + LCTGD+G SA KTYDLEVWL QN YREISSC Sbjct: 299 KSMDALEELTGHAEKVLQLLKLPYRKMLLCTGDMGASARKTYDLEVWLPAQNTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R + K + HTLNGSG+AVGR L+A++ENY ADG + IP VL Sbjct: 359 SNMWDFQARRMQARFRSKDDKKTQLVHTLNGSGLAVGRTLVAVMENYQQADGRIEIPEVL 418 Query: 414 RPYMNNLAVI 423 RPYM L I Sbjct: 419 RPYMKGLEFI 428 >gi|323525163|ref|YP_004227316.1| seryl-tRNA synthetase [Burkholderia sp. CCGE1001] gi|323382165|gb|ADX54256.1| seryl-tRNA synthetase [Burkholderia sp. CCGE1001] Length = 431 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 200/431 (46%), Positives = 275/431 (63%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFTALEAERRDTQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G AL E + +++ + ++ L L+ +PN+P + VP+G Sbjct: 61 MKGRG--EDTSALMAEVGGIGDEMKASAAKLDDIQKRLSDLLLGVPNLPHKSVPVGRDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++G LG +DF+ KLSGARF++L G +A L RAL Q Sbjct: 119 DNVEVRRWGTPRQFDFEVKDHVDVGAPLG-LDFETGAKLSGARFTMLRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE+ P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQQHGYTEIYTPYIVNPEILYGTGQLPKFADDMFRVEKGGGENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E+ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRESIVEANALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVWL QN YREISSC Sbjct: 298 TSYDALEQMVGHAETILQKLELPYRVITLCTGDMGFSATKTYDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +RYR+ K + HTLNGSG+AVGR L+A+LEN+ NADGSVT+P VL Sbjct: 358 SNTESFQARRMQARYRNAQGK-PELVHTLNGSGLAVGRTLVAVLENFQNADGSVTVPAVL 416 Query: 414 RPYMNNLAVIK 424 RPY+ + ++ Sbjct: 417 RPYLGGVERLE 427 >gi|148262370|ref|YP_001229076.1| seryl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|189083570|sp|A5GD47|SYS_GEOUR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|146395870|gb|ABQ24503.1| seryl-tRNA synthetase [Geobacter uraniireducens Rf4] Length = 422 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 190/424 (44%), Positives = 269/424 (63%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R+N E ++ LK R E LD R L+++ E ++A RN S +I + Sbjct: 1 MLDARYLRENLETVEARLKTRGAGVDLERFRQLDGSRRELLQQTETLKALRNKVSDEISR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S E + +++ L++E V +L+ + +PN+P P+G S Sbjct: 61 IK---DKSQAQDRIIEMREVSQRIKGLDEELKGVEEALEYFLLTVPNIPCAATPVGASEV 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G+KP + H+EIGE+L ++DF+R KL+GARF++ G A LERAL Sbjct: 118 DNVEVKKWGEKPVFDFAPKPHWEIGESLDILDFERGAKLAGARFTLYKGFGARLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSLTNL 239 FM+DLHT H Y E+ P +V E+M GTGQ+PKF +D+ +LIPT+EV +TN+ Sbjct: 178 FMLDLHTERHKYLEMLPPFMVNRESMTGTGQLPKFEEDLFHMEGVDYFLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+++ LPL +T P FR EAGS G+DTRG++RQHQF K ELV S+ E Sbjct: 238 HRGEILKAADLPLCYTAYTPCFRKEAGSYGKDTRGLIRQHQFNKVELVKFVHPAHSYNEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++L AEE+L+ L L YRVV LCT D+GFSA +TYD+EVWL GQ+ YREISSCS +F Sbjct: 298 DKLLDNAEEVLRLLGLPYRVVDLCTADIGFSAARTYDIEVWLPGQDCYREISSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R+R+ +F HTLNGSG+AVGR L+AILENY ADGSV+IP LRPYM Sbjct: 358 QARRASIRFREDEKAKPEFVHTLNGSGLAVGRTLVAILENYQEADGSVSIPGALRPYMGG 417 Query: 420 LAVI 423 + I Sbjct: 418 IEKI 421 >gi|301063988|ref|ZP_07204453.1| serine--tRNA ligase [delta proteobacterium NaphS2] gi|300441899|gb|EFK06199.1| serine--tRNA ligase [delta proteobacterium NaphS2] Length = 428 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 201/426 (47%), Positives = 270/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R N E + ++ R + +LDEK R + +E +R RN+ S I Sbjct: 1 MLDLKFVRSNLEDIKKMIRNRGYDLDVSQFDALDEKRREQLSVLEALRHHRNTVSDNIAT 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + E T+ Q+ EKE +V L +L+ IPN+P VP+G Sbjct: 61 MKKNGK--DASNVIAEMKTVSAQIKEKEKELPDVVEKLDQLLQLIPNIPDPSVPVGKDEK 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +IR+ G + H+EIGE LG++DF RA KLSGARF++ G A LERAL Sbjct: 119 DNPVIRTWGDIRDFPFEALPHWEIGENLGILDFARAAKLSGARFALYRGAGAALERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FMI +HT+EHGYTE+ P +V +M+GTGQ+PKF +D+F +LIPT+EV +TN+ Sbjct: 179 FMIHIHTTEHGYTEILPPFMVNAASMFGTGQLPKFEEDLFKVKGRDLYLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E+++ LP + P FRSEAGS G+DTRG++RQHQF K ELV ++ EDS+ E Sbjct: 239 HREEVLQEDDLPAAYVAYTPCFRSEAGSYGKDTRGLIRQHQFNKVELVKFSKPEDSYHEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEEIL+RL+L YRVV+LCTGD+GFSA KTYDLEVWL GQ LYREISSCS F Sbjct: 299 EKLTQNAEEILRRLELPYRVVTLCTGDIGFSAAKTYDLEVWLPGQGLYREISSCSNFVEF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R++ + HTLNGSG+AVGR ++AILENY DGSV IP LRP+M Sbjct: 359 QARRANIRFKRKGKSGNELVHTLNGSGLAVGRTVVAILENYQREDGSVEIPEALRPFMGG 418 Query: 420 LAVIKK 425 + I K Sbjct: 419 IIEIAK 424 >gi|323495032|ref|ZP_08100121.1| seryl-tRNA synthetase [Vibrio brasiliensis LMG 20546] gi|323310689|gb|EGA63864.1| seryl-tRNA synthetase [Vibrio brasiliensis LMG 20546] Length = 435 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 189/434 (43%), Positives = 266/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E V + L+++ +PN+P ++VP G + Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELDAVMAQLEEITLSVPNLPADDVPDGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ + ++H ++GE +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKTYDFELKDHVDLGEMGDGLDFASATKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLEEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMDALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 PT L+ YM I Sbjct: 421 PTALQKYMGGATHI 434 >gi|322514581|ref|ZP_08067614.1| serine--tRNA ligase [Actinobacillus ureae ATCC 25976] gi|322119520|gb|EFX91607.1| serine--tRNA ligase [Actinobacillus ureae ATCC 25976] Length = 435 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 197/436 (45%), Positives = 267/436 (61%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + + ALK KR E + +L+E+ + L K E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLDDVANALKVKRGFTLDVERVKTLEEQRKTLQVKTETLQAERNTRSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + AL E + +L + +V + +++L+ +PN+P +EVP+G Sbjct: 61 VAKARG--EDISALLAEVDNMGNELNEAKVALDQVQAEIRELLLSVPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + G+ ++H +GEAL +DF KL+ +RF V+ G LA L RAL Sbjct: 119 TENLEVSRWGEPRQFDFEVKDHVALGEALNGLDFAAGVKLTASRFVVMKGKLARLHRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLHT +HGY E + P LV + ++GTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHTEQHGYVETNVPFLVNHDTLFGTGQLPKFGEDLFHTQPLTGQDPNETQRPFSL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TNL EII+ +LPLR T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 239 IPTAEVPVTNLVRDEIIDEDTLPLRCTAHTPCFRSEAGSYGRDTRGLIRMHQFEKVEMVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE++L+ L L YR V LCTGD+GF + KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM++R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 +P VLRPYM + I Sbjct: 419 VPEVLRPYMGGVEAIT 434 >gi|262376674|ref|ZP_06069902.1| seryl-tRNA synthetase [Acinetobacter lwoffii SH145] gi|262308384|gb|EEY89519.1| seryl-tRNA synthetase [Acinetobacter lwoffii SH145] Length = 425 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 191/425 (44%), Positives = 270/425 (63%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E +++AL KR ++ E SL+ + + + K E ++A RN+ + Q+GQ Sbjct: 3 MIDPKLLRNNIEAVNVALAKRGVQLNVEEWASLEARRKEIQSKTETLQAERNAGAKQVGQ 62 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + S + +++ E E+ + L++ + IPN+P E VP G + Sbjct: 63 IKKAGG--DASEIMTRMSAIGDEIKAAEAALAELQAELEEKLLSIPNLPDEAVPEGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RA+ Q Sbjct: 121 DNVEILKWGTPREFDFEIKDHTDLGEMMGGLEFETATKLTGSRFSVLKGPLARLQRAITQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM++ HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 181 FMLNTHTDQNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEFYLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 241 FVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQV 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 301 LEELTGHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K +F HTLNGSG+AVGR L+A++ENY ADGS+ IP VLRPYM Sbjct: 361 FQARRMKARYR-ADQKKTEFVHTLNGSGLAVGRTLLAVMENYQRADGSIEIPEVLRPYMG 419 Query: 419 NLAVI 423 I Sbjct: 420 GATYI 424 >gi|168181130|ref|ZP_02615794.1| seryl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|182668022|gb|EDT80001.1| seryl-tRNA synthetase [Clostridium botulinum NCTC 2916] Length = 426 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 184/428 (42%), Positives = 269/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR N + AL R + + +L LDE+ R ++ K+E ++++RN S++ Sbjct: 1 MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + EG V + E L E++ + ++ ++ ++ IPN+P +VP G Sbjct: 61 VPKLKKEGK--DVSNIVAEMKNLSEEIKGFDATLAKIDEKIQYIMLRIPNIPNSQVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +NI IR+ + + H++IG L ++DF+RA K++G+RF+ G A LERA Sbjct: 119 TDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT +HGY E+ P +V +M GTGQ+PKF +D F ++ + IPT+EV + Sbjct: 179 VISYFLDTHTEKHGYIEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY E+++ LPL+ + FRSEAGSAGRDTRG++RQHQF K ELV T+ E S+ Sbjct: 239 TNLYRDEVLKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE +LK L + YRVV +C GDLGF+A YDLEVW+ N Y EISSCS Sbjct: 299 DELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ + ++ HTLNGSGVA+GR + AILENY + DGSVTIP VLRPY Sbjct: 359 EDFQARRANIRYKEDSKAKPQYVHTLNGSGVAIGRTVAAILENYQSEDGSVTIPEVLRPY 418 Query: 417 MNNLAVIK 424 M VIK Sbjct: 419 MGGREVIK 426 >gi|170760371|ref|YP_001785350.1| seryl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|238688798|sp|B1L1M0|SYS_CLOBM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|169407360|gb|ACA55771.1| serine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 426 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 186/428 (43%), Positives = 268/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR N + AL R + + +L LDE+ R ++ K+E ++++RN S++ Sbjct: 1 MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + EG V + E L E++ + ++ ++ ++ IPN+P +VP G Sbjct: 61 VPKLKKEGK--DVSNIVAEMKNLSEEIKGFDTTLAKIDEKIQYIMLRIPNIPNPQVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +NI IR+ + + H++IG L ++DF+RA K++G+RF+ G A LER+ Sbjct: 119 TDEDNIEIRNWSEPTKFDFEPKAHWDIGSNLNILDFERAGKVTGSRFTFYKGLGARLERS 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 L + +D HT +HGYTE+ P +V +M GTGQ+PKF +D F ++ + IPT+EV + Sbjct: 179 LISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EI++ LPL+ + FRSEAGSAGRDTRG++RQHQF K ELV T+ E S+ Sbjct: 239 TNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE +LK L + YRVV +C GDLGF+A YDLEVW+ N Y EISSCS Sbjct: 299 EELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ ++ HTLNGSGVA+GR + AILENY N DGSVTIP VLRPY Sbjct: 359 EDFQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILENYQNEDGSVTIPEVLRPY 418 Query: 417 MNNLAVIK 424 M IK Sbjct: 419 MGGKEAIK 426 >gi|134094256|ref|YP_001099331.1| seryl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|166222732|sp|A4G3W7|SYS_HERAR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|133738159|emb|CAL61204.1| serine tRNA synthetase (Serine--tRNA ligase) (SerRS) [Herminiimonas arsenicoxydans] Length = 431 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 197/434 (45%), Positives = 271/434 (62%), Gaps = 12/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DIQ +R++ E + L R + +L+ + + + E+++ RRN+ S QIG Sbjct: 1 MIDIQLLRKDIETVAARLAGRKFQLDVNTFNALEAERKQIQSGTEELQNRRNTLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + ++L + + + K + IPN+P E VP+G Sbjct: 61 LKGKG--EDTSAVMAEVAGIGDELKASAARLDVLQAEISKFMLAIPNLPHESVPVGKDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG + R+H +IG ALG +DFD A K++G+RFSV+ G +A L RAL Q Sbjct: 119 DNVELRKVGTPRAFDFEVRDHVDIGAALG-LDFDVAAKITGSRFSVMKGGIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------DGRWLIPTS 232 FM+D HT EHGYTE P +V +++ GTGQ+PKF D+F + +LIPT+ Sbjct: 178 FMLDTHTEEHGYTECYTPYIVNADSLQGTGQLPKFEADLFAVKKGGQEGEGEALYLIPTA 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTN+ EI+ + +LP+R T +P FRSEAGS GRDTRGM+RQHQF K E+V + Sbjct: 238 EVPLTNIVRDEILAADALPVRMTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S+ + M AE ILK+L L YRV++LCTGD+GF A KTYDLEVWL QN YREISS Sbjct: 298 EKSYEALDEMCGHAENILKKLGLPYRVITLCTGDMGFGASKTYDLEVWLPAQNTYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C FQ+RRM +R+R+ K + THTLNGSG+AVGR L+A+LENY ADGSV IP V Sbjct: 358 VSNCEAFQARRMQARFRNAQGK-PELTHTLNGSGLAVGRTLVAVLENYQQADGSVIIPEV 416 Query: 413 LRPYMNNLAVIKKE 426 L PYM L + + Sbjct: 417 LHPYMGGLTRLLPQ 430 >gi|300722523|ref|YP_003711813.1| serine tRNA synthetase [Xenorhabdus nematophila ATCC 19061] gi|297629030|emb|CBJ89615.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Xenorhabdus nematophila ATCC 19061] Length = 429 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 188/430 (43%), Positives = 259/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R E + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGYTLDVETLRKQEERRKVLQVETETLQAERNSRSKAIGS 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L+ E + L E+L + E + + ++ L +PN+P + P G + Sbjct: 61 AKARG--EDIAPLRQEVNQLGEKLDSAKAELEALQAEIRNLALSMPNIPDDASPDGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ ++H +GE G +DF A KL+G+RF V+ G +A L RA+ Q Sbjct: 119 DNLEISRWGEPRQYGFEVKDHVSLGELSGGLDFAAAVKLTGSRFVVMKGQIARLHRAIAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM++LHT +HGY E P LV +++YGTGQ+PKF +D+F T LIPT+E Sbjct: 179 FMLNLHTEQHGYLETYVPYLVNYDSLYGTGQLPKFGEDLFHTRPLEEESASNYALIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL EI++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I E Sbjct: 239 VPVTNLVRDEILDESELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVHPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E + AE++L+ L+L YR + LCTGD+G A KTYDLEVWL QN YREISSC Sbjct: 299 KSMEALEELTGHAEKVLQLLNLPYRKMLLCTGDMGAGARKTYDLEVWLPAQNTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R + K + HTLNGSG+AVGR L+A++ENY ADG + IP VL Sbjct: 359 SNMWDFQARRMQARFRSKDDKKPQLVHTLNGSGLAVGRTLVAVMENYQQADGRIEIPEVL 418 Query: 414 RPYMNNLAVI 423 R YMN L I Sbjct: 419 RSYMNGLEYI 428 >gi|229816611|ref|ZP_04446909.1| hypothetical protein COLINT_03668 [Collinsella intestinalis DSM 13280] gi|229807817|gb|EEP43621.1| hypothetical protein COLINT_03668 [Collinsella intestinalis DSM 13280] Length = 430 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 206/429 (48%), Positives = 289/429 (67%), Gaps = 5/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R+NPE LD A+ R E +LDE+ R +I ++ED++A RN+ S +IG Sbjct: 1 MLDIKFVRENPEALDAAMANRQGSWDRERFFALDEERRSVIAEVEDLQATRNAESKKIGV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + EG +A K+ + E++ +L E+ + + ++ IPN+P + P+G N Sbjct: 61 LMKEGKRDEAEAAKDAVRQVNEKIEVLGARRAELDAEVSDFMARIPNIPADVTPVGKDEN 120 Query: 121 ENILIRSVGKKPSA---IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 EN R VG+ + H+++G G++DFDR KLSGARF+VL+G A L+RA Sbjct: 121 ENPERRRVGEPRDFAAEGFEPKAHWDLGAETGILDFDRGAKLSGARFTVLSGAGATLDRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L F ++ H G+TE P++V E MYGTGQ+PKF DD + T + ++LIPT+EV+LT Sbjct: 181 LQNFFLNTHI-SRGFTEFIPPVIVNREIMYGTGQLPKFEDDAYHTGEDQFLIPTAEVALT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL++ E++++ LPLR+T P FR EAGSAGRDTRG++RQHQF K E+V + E+S Sbjct: 240 NLHAGEVLDASQLPLRYTAGTPCFREEAGSAGRDTRGIIRQHQFTKVEMVKFAKPEESDD 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E M++ AE IL++L L YRV+SLCTGDLGFSA +TYD+EVWL N Y+EISSCS CG Sbjct: 300 ELESMVAEAEFILQQLGLPYRVISLCTGDLGFSARQTYDIEVWLPSYNAYKEISSCSNCG 359 Query: 358 NFQSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +YRDP + K +F HTLNGSG+ GR + AI+ENY NADGS+T+P VLRPY Sbjct: 360 DFQARRANIKYRDPENFKGQRFVHTLNGSGLPTGRTMAAIMENYQNADGSITVPEVLRPY 419 Query: 417 MNNLAVIKK 425 M + I+ Sbjct: 420 MGGIERIEP 428 >gi|269797577|ref|YP_003311477.1| seryl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269094206|gb|ACZ24197.1| seryl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 426 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 270/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + + L RH + + +S ++ R LI ++E+++A RNS + +I + Sbjct: 1 MLDLKFVRENIDLVQQNLDNRHTKGDLKTFVSAYDERRQLIGQVEELKALRNSVTEEISK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N D E + +++ L+ EV + L+ +PN+ VP+G + Sbjct: 61 LKR--NKENADEKIGEMKKVGDEIAELDNRIREVETKLRDAALMLPNMCDASVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ R G+ + H+++GE L ++DF+RA K+SGARF+V G A LERAL Sbjct: 119 ENVEQRKWGEPRQFDFDVQAHWDLGENLDILDFNRAGKMSGARFTVYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGYTE+ P +V E + GTGQ+PKFA+DM+ + IPT+EV+LTN Sbjct: 179 FMVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVEGTEYFLIPTAEVTLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ + LP +T FR+EAGSAGRDTRG++RQHQF K E+V + + EDSF E Sbjct: 239 HGGEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AEE+L+ L+L +RV++LCTGD+GF + KTYD+EVW+ Q YREISSCS +F Sbjct: 299 ETLTDNAEEVLRLLELPFRVITLCTGDMGFGSAKTYDVEVWMPAQGKYREISSCSNMTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSG+AVGR + AILENY ADGSV IP VL PYM Sbjct: 359 QARRANIKFRRGPKGKPEFVHTLNGSGLAVGRTVAAILENYQQADGSVVIPKVLVPYMGG 418 Query: 420 LAVIKK 425 + VI Sbjct: 419 VEVISP 424 >gi|229917440|ref|YP_002886086.1| seryl-tRNA synthetase [Exiguobacterium sp. AT1b] gi|259511669|sp|C4KZX8|SYS_EXISA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|229468869|gb|ACQ70641.1| seryl-tRNA synthetase [Exiguobacterium sp. AT1b] Length = 427 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 274/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +RQ+ E + L R + + L+EK R LI ++E +A+RN + QI Sbjct: 1 MLDIKRLRQDFEGIKEKLAHRGEDLSALDRFPQLEEKRRDLINEVEVKKAKRNEATKQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + ET L +++ +L++E EV + L ++ IPN+P E PIG + Sbjct: 61 ELKR--NKEDAEGPILETRRLGDEIKLLDEELREVEAELNLILLSIPNIPHESTPIGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR +G KP ++H+++ E L ++D +RA K++G+RF G A LERAL Sbjct: 119 DDNVTIREIGTKPEFDFEPKQHWDVMEDLQIVDVERAGKVTGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+DLH+ EHGY EV P +V ++M GTGQ+PKF +D F +L+PT+EV +TN Sbjct: 179 NFMMDLHSDEHGYAEVLPPYMVNRDSMTGTGQLPKFEEDAFKVADTNYFLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ LP+ +T + +FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ + Sbjct: 239 MHREEILPETQLPIAYTAYSANFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEESYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AEE+LKRL L Y+V+S+CT DLGF+A K YD+EVW+ Q +YREISSCS + Sbjct: 299 LELLTGHAEEVLKRLGLPYQVLSMCTADLGFTAAKKYDIEVWMPAQGVYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R+R + +F HTLNGSG+AVGR + AILENY ADGSV IP VLRPYM Sbjct: 359 FQARRAGIRFRRDANAKPEFVHTLNGSGLAVGRTVAAILENYQQADGSVVIPEVLRPYMG 418 Query: 419 NLAVIK 424 I+ Sbjct: 419 GKEKIE 424 >gi|153939104|ref|YP_001389385.1| seryl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|166219867|sp|A7G9C5|SYS_CLOBL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|152935000|gb|ABS40498.1| serine--tRNA ligase [Clostridium botulinum F str. Langeland] gi|295317492|gb|ADF97869.1| serine--tRNA ligase [Clostridium botulinum F str. 230613] Length = 426 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 186/428 (43%), Positives = 269/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR N + AL R + + +L LDE+ R ++ K+E ++++RN S++ Sbjct: 1 MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILAKVEVLKSKRNQVSSE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + EG V + E L E++ + ++ ++ ++ IPN+P +VP G Sbjct: 61 VPKLKKEGK--DVSNIVAEMKNLSEEIKGFDATLAKIDEKIQYIMLRIPNIPNPQVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +NI IR+ + + H++IG L ++DF+RA K++G+RF+ G A LERA Sbjct: 119 TDEDNIEIRNWLEPTKFYFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT +HGYTE+ P +V +M GTGQ+PKF +D F ++ + IPT+EV + Sbjct: 179 VISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EI++ LPL+ + FRSEAGSAGRDTRG++RQHQF K ELV T+ E S+ Sbjct: 239 TNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE +LK L + YRVV +C GDLGF+A YDLEVW+ N Y EISSCS Sbjct: 299 EELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ ++ HTLNGSGVA+GR + AILENY + DGSVTIP VLRPY Sbjct: 359 EDFQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILENYQSEDGSVTIPEVLRPY 418 Query: 417 MNNLAVIK 424 M VIK Sbjct: 419 MGGREVIK 426 >gi|332141537|ref|YP_004427275.1| seryl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|238693277|sp|B4RZU0|SYS_ALTMD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|327551559|gb|AEA98277.1| seryl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 430 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 200/431 (46%), Positives = 268/431 (62%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + E L R SL+EK + L + +D++ RN S IG+ Sbjct: 1 MLDPKCLRSDIEQTAKRLAARGFNLDVAAFSSLEEKRKTLQSRTQDLQNERNVRSKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L E L ++L + E E+ + L IPN+P E VP G + Sbjct: 61 AKAQG--EDIAPLLAEVGKLGDELDAAKAELSELLEEINTLTQGIPNLPHESVPEGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGE-ALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ I G+ + ++H ++ E +DF A+KL+G+RF V+ G +A L RAL Sbjct: 119 DNVEISRWGEPRTFDFEVKDHVDVAEGLNNGLDFATASKLTGSRFVVMRGDIARLNRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSE 233 QFM+D HT EHGY E+ P LV +++YGTGQ+PKF +D+F T LIPT+E Sbjct: 179 QFMLDTHTQEHGYQEMYVPYLVNADSLYGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTN+ EI+++K+LP++ T P FRSEAGS GRDTRG++RQHQF K ELV + + E Sbjct: 239 VPLTNIARDEILDAKTLPVKMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 DSF E + AE IL++L+L YR V LCTGD+GF ACKTYDLEVWL QN YREISSC Sbjct: 299 DSFDALEALTGHAEVILQKLELPYRKVLLCTGDMGFGACKTYDLEVWLPAQNTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+P + + HTLNGSG+AVGR L+AILEN ADGSVT+P L Sbjct: 359 SNMLDFQARRMQARFRNPETNKPELLHTLNGSGLAVGRTLVAILENNQQADGSVTVPKAL 418 Query: 414 RPYMNNLAVIK 424 PYM VIK Sbjct: 419 VPYMAGQEVIK 429 >gi|15644131|ref|NP_229180.1| seryl-tRNA synthetase [Thermotoga maritima MSB8] gi|8928374|sp|Q9X199|SYS_THEMA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|4981940|gb|AAD36449.1|AE001791_11 seryl-tRNA synthetase [Thermotoga maritima MSB8] Length = 425 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 209/426 (49%), Positives = 282/426 (66%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ IRQNP+ + AL+KR +P + IL +D R I K ++R+RRN S + Sbjct: 1 MIDIKLIRQNPDFVKEALRKRGEDPAIIDEILKIDADWRATITKTNELRSRRNEISKNVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG + +AL E L E++ LE++E E+ L L+ IPN+P E VP+G Sbjct: 61 RLKKEGKNAEAEALIEEGKRLGEEIKALEEKEKELQKKLNDLLLMIPNIPHESVPVGEDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+ H+++G A GLMDF RA+KLSG+RF+V+ G LA LERAL Sbjct: 121 SQNVEVRRWGEPREFDFTPLAHWDLGPAWGLMDFSRASKLSGSRFTVMYGKLARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTN 238 FM+D+HT EHGYTEV P LV+ E + TGQ+PKF ++++ D +LIPT+EV L Sbjct: 181 NFMLDVHTKEHGYTEVWVPHLVKRETITITGQLPKFEEELYLAERDDLFLIPTAEVPLAA 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+S EI+E K LP ++ + P +R EAGS G+D RGM+RQHQF K ELV +T E SF + Sbjct: 241 LHSGEILEEKELPKKYVSYTPCYRREAGSYGKDVRGMIRQHQFDKVELVWVTTPERSFED 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E ++ AE IL++L+L YRVVSLCTGDLGF++ KTYD+EVWL N Y+EISSCS + Sbjct: 301 LEELVKDAETILRKLELPYRVVSLCTGDLGFTSAKTYDIEVWLPSYNAYKEISSCSNVTD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR + L++ HTLNGSG+AVGR L+AILENY DGSV +P VL PY Sbjct: 361 FQARRGNMRYRRRSDGKLEYVHTLNGSGIAVGRALVAILENYQQPDGSVRVPEVLVPYT- 419 Query: 419 NLAVIK 424 VI Sbjct: 420 GFEVIP 425 >gi|332288166|ref|YP_004419018.1| seryl-tRNA synthetase [Gallibacterium anatis UMN179] gi|330431062|gb|AEC16121.1| seryl-tRNA synthetase [Gallibacterium anatis UMN179] Length = 428 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 199/430 (46%), Positives = 266/430 (61%), Gaps = 8/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R + L KR+ + I L+E+ + L K E ++A RN+ S +G Sbjct: 1 MIDPNLLRNDLAATAEKLLTKRNFVLDVQKIEQLEEQRKQLQVKTETLQAERNARSKAVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + +L + +V L+++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIQPLLAEMENMGTELDQAKTALDQVLEELRQIALSIPNIPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ + G+ R+H ++GE G +DF A KL+GARF+VL G +A L RAL Sbjct: 119 SENLEVSRWGEPKQYDFPIRDHVDLGELSGGIDFPTAVKLTGARFAVLKGKIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEV 234 QFM+DLHT +HGY E+ P LV E +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLEMYVPYLVNHETLYGTGQLPKFGEDLFHTKPLEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TN EI+ ++ LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I E Sbjct: 239 PVTNTVRGEILGAEDLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVEPEK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMDALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM++RYR K + HTLNGSG+AVGR L+A+LENY ADGS+ +P VLR Sbjct: 359 NMWDFQARRMSARYRVKGEKKPRLVHTLNGSGLAVGRTLVAVLENYQQADGSIIVPEVLR 418 Query: 415 PYMNNLAVIK 424 PYMN L VI+ Sbjct: 419 PYMNGLEVIR 428 >gi|34496830|ref|NP_901045.1| seryl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] gi|46577183|sp|Q7NY99|SYS_CHRVO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|34102685|gb|AAQ59050.1| seryl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] Length = 427 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 208/430 (48%), Positives = 276/430 (64%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI +R + E + L R + L+ + + L ++++++A+RN+ S QIG Sbjct: 1 MLDINLLRNDIEAVAARLAGRGYTLDTAAFNQLESERKSLQSRMQELQAKRNATSKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +G V A+ E +TL ++L E+ V L + IPN+P E VP+G N Sbjct: 61 AKGKG--EDVSAILAEVATLGDELKAAEQAFDGVQGQLDAWLMSIPNLPHESVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG ++H ++G LG +DFD KLSGARF+VL G +A L RA+ Q Sbjct: 119 DNVEVRRVGVPRQFDFEVKDHVDVGAPLG-LDFDTGAKLSGARFTVLKGDIARLHRAIAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM++ HT HGY E P +V D A+ GTGQ+PKFADDMF T ++LI TSE Sbjct: 178 FMLNTHTGSHGYQEHYTPYIVNDTALLGTGQLPKFADDMFKVTRGGDESAVPQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + I++ LP + T +P FRSEAGS GRDTRGM+RQHQF K E+V + + E Sbjct: 238 VTLTNTVADTILQESELPKKMTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVRVEKPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF + KTYDLEVWL QN YREISSC Sbjct: 298 HSYAALEEMVGHAENILKALELPYRVITLCTGDMGFGSAKTYDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C FQ+RRM +RY+D N K+ + HTLNGSG+AVGR L+AILENY NADGSVT+PTVL Sbjct: 358 SNCEAFQARRMKARYKDENGKN-QLVHTLNGSGLAVGRTLVAILENYQNADGSVTVPTVL 416 Query: 414 RPYMNNLAVI 423 RP+M I Sbjct: 417 RPFM-GKDRI 425 >gi|304315564|ref|YP_003850709.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777066|gb|ADL67625.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 423 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 194/426 (45%), Positives = 270/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR NP+ + A++ + + L +DEK R ++K++E ++ RN S I + Sbjct: 1 MLDIKRIRNNPDEVKKAIELKKENSNIDEFLEIDEKRRGILKELESLKNTRNKESENIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + L E + +++ +E + + L++L+ IPN+P E VP+G S Sbjct: 61 LKREGK--DAEELIKEMKEISDKIKAMESDVKQYDERLEELLWTIPNIPHESVPVGDSDA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G + H++IG LG++DF+ A++++G+RF+ G LER+L Sbjct: 119 DNVEIRRWGDVRKFDFEIKPHWDIGVELGILDFEAASRVTGSRFTFYKGLGCRLERSLIS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLHT +HGYTEV P +V +MYGTGQ+PKF +D F + IPT+EV +TN+ Sbjct: 179 FMMDLHTEKHGYTEVFPPFMVHRRSMYGTGQLPKFEEDAFKVAGTDYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y II+++ LP+ + FR EAGSAGRDTRG++RQHQF K ELV IT E S+ E Sbjct: 239 YRETIIDAEELPIYNCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKITEPERSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M++ AE++LK L + YRVVS+CTGDLGF+A K YDLEVW+ Y EISSCS C +F Sbjct: 299 EKMVNDAEDVLKTLGIPYRVVSICTGDLGFTAAKKYDLEVWMPSYGRYVEISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR ++ HTLNGSGVAVGR AILENY DGSV IP LRPYM Sbjct: 359 QARRANIKYRPKGGGKAQYVHTLNGSGVAVGRTFAAILENYQQEDGSVVIPEALRPYMK- 417 Query: 420 LAVIKK 425 VI+K Sbjct: 418 CDVIRK 423 >gi|320530062|ref|ZP_08031132.1| seryl-tRNA synthetase [Selenomonas artemidis F0399] gi|320137495|gb|EFW29407.1| seryl-tRNA synthetase [Selenomonas artemidis F0399] Length = 437 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 189/425 (44%), Positives = 271/425 (63%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + + LK R +LDE+ R +++ +E+ +ARRN+ S +IG Sbjct: 15 MLDMKFVRENLDAVHEMLKNRCNGLDLSPFTALDEERRRILQDVEEKKARRNAVSKEIGV 74 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + E TL +++ L+++ +V L+ L+ IPN+P +VP+G Sbjct: 75 RKKAG--EAAEDVVAEMRTLGDEIAALDEDLRDVELKLRDLLLQIPNMPKADVPVGKDET 132 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G + H++IGE LG++D +RA K++GARF+ G A LERA Sbjct: 133 ENPEVRRTGTPRVFDFEPKAHWDIGERLGILDAERAAKVTGARFTFYKGLGARLERACIN 192 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLH +HGYTE+ AP +V + +M GTGQ+PKFA+DMF +L+PT+EV TN Sbjct: 193 FMMDLHAEKHGYTEMLAPYIVNESSMVGTGQLPKFAEDMFKLEGLDYYLVPTAEVPTTNY 252 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+++ LP +T+ FR+EAGSAGRDTRG++RQHQF K EL+ E S+ E Sbjct: 253 HRDEILDAAQLPEYYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVTPETSWDEL 312 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M+ AE++L+ L+L YRV+ LCTGD+ F++ KTYDLEVW+ QN YREISSCS C ++ Sbjct: 313 ESMVEAAEDVLRTLELPYRVIQLCTGDMSFTSAKTYDLEVWMPAQNKYREISSCSNCTDY 372 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + +YR F HTLNGSGVAVGR + AILEN DGSV +P L PYM Sbjct: 373 QARRASIKYRPARGAKPAFLHTLNGSGVAVGRTVAAILENNQQEDGSVVVPQALVPYMGG 432 Query: 420 LAVIK 424 + VI+ Sbjct: 433 VTVIR 437 >gi|317484900|ref|ZP_07943789.1| seryl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316923838|gb|EFV45035.1| seryl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 424 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 189/427 (44%), Positives = 263/427 (61%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ +++NPE + AL KRH LD K R L+ ++E ++A RN SA++ + Sbjct: 1 MLDLKLLQKNPEVVAAALAKRHSPLNMRTFEELDNKRRELLAQVEALKAERNRASAEVAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G +A S L ++ L+ V + L + +PN+P VP G N Sbjct: 61 LKRNG--EDAEAFIASLSDLSSRISALDSATEAVKADLADWMLTVPNIPDASVPDGVDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G + H+++ G +DF+R KL+G+RF+V G A LERAL Sbjct: 119 DNVEVHRWGTPREFDFEVKNHWDLSNDNGGLDFERGAKLAGSRFTVSWGWAARLERALVC 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 F +D H E G TE+ PL+V + M GTGQ+PKF +D+F +LIPT+EV +TNL Sbjct: 179 FYLDFH-HEQGRTEILPPLMVNRKTMQGTGQLPKFEEDLFKVADWEYYLIPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI++ ++LP R+ + P FRSEAGSAG+DTRG +RQHQF K E+V IT +DSF Sbjct: 238 HADEILDEEALPKRYCSQTPCFRSEAGSAGKDTRGYIRQHQFTKVEMVYITHPDDSFKYL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M AE +L+RL+L YR ++LC GD+GFSACKTYD+EVWL GQ YREISSCS C +F Sbjct: 298 EEMRRSAETLLERLELPYRTITLCAGDMGFSACKTYDVEVWLPGQRTYREISSCSNCVDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R K ++ HTLNGSG+ GR L+AI+ENY DGS+ +P VL PYM Sbjct: 358 QARRANIRFRPKGGK-PEWVHTLNGSGLPTGRSLVAIMENYQQKDGSIVVPKVLVPYMGG 416 Query: 420 LAVIKKE 426 VI+ Sbjct: 417 QEVIEPT 423 >gi|90413226|ref|ZP_01221221.1| seryl-tRNA synthetase [Photobacterium profundum 3TCK] gi|90325778|gb|EAS42236.1| seryl-tRNA synthetase [Photobacterium profundum 3TCK] Length = 430 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 191/429 (44%), Positives = 261/429 (60%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R E + L+EK + L ED++A+RN+ S IGQ Sbjct: 1 MLDSKLLRTELDETAEKLARRGFTLDVENLRLLEEKRKSLQMMTEDLQAQRNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+GN + + E + L L +K E+ L+ + +PN+P + VP G + Sbjct: 61 AKAQGNHEEAEKILAEVANLGSDLDDAKKALAELLDELQSITMMVPNLPDDSVPAGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ I G+ + ++H ++GE G +DF A K+SG+RF V+ G A L RA+ Q Sbjct: 121 ENVEISRWGEPKAYDFEVKDHVDLGEMAGGLDFASAVKISGSRFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF +D+F T LIPT+EV Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTKPATEEGVGMSLIPTAEV 240 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TN+ I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV IT+ ED Sbjct: 241 PVTNMVRDTITDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQITKPED 300 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YREISSCS Sbjct: 301 SMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGAAKTYDLEVWVPAQETYREISSCS 360 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R+R K + HTLNGSG+AVGR ++AI+EN ADG + +P VLR Sbjct: 361 NMQDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAIMENGQQADGRIEVPVVLR 420 Query: 415 PYMNNLAVI 423 YM I Sbjct: 421 KYMQGATHI 429 >gi|15612587|ref|NP_240890.1| seryl-tRNA synthetase [Bacillus halodurans C-125] gi|20139939|sp|Q9KGN4|SYS_BACHD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|10172636|dbj|BAB03743.1| seryl-tRNA synthetase [Bacillus halodurans C-125] Length = 425 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 190/426 (44%), Positives = 273/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R++ + L+ R + E SLDEK R +I K+E++++RRN S ++ Sbjct: 1 MLDIKRLRKDFAGIREKLQTRGEDISGLEKFGSLDEKRRQVIVKVEELKSRRNQVSQEVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q E D L E + +++ L++ ++ L +L+ IPNVP E P+G + Sbjct: 61 QLKREKK--DADHLIKEMRDVSDEIKGLDETLRQLDEELDQLLLAIPNVPHESTPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+ P+ + H+++ ALG++DF+RA K++G+RF+ G A LERAL Sbjct: 119 DDNVEVRKWGEVPNFPFEPKAHWDLATALGIVDFERAAKVTGSRFAFYKGAGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH +HGY EV P LV +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMMDLHHDKHGYEEVLPPYLVNRTSMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ + LP+ +T + +FRSEAGSAGRDTRG++RQHQF K ELV EDS+ E Sbjct: 239 LHRDEILSADQLPIAYTAYSMNFRSEAGSAGRDTRGLIRQHQFNKVELVRFVAPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE++L+ L L YRV+S+CT DLGF+A K YDLEVW+ N YREISSCS + Sbjct: 299 LEKLTGHAEKVLQLLKLPYRVMSMCTADLGFTAAKKYDLEVWIPSANTYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N ++R +F HTLNGSG+AVGR + AILENY DG++ IP VLRPYM Sbjct: 359 FQARRANIKFRREAKGKAEFVHTLNGSGLAVGRTVAAILENYQQEDGTIVIPEVLRPYMG 418 Query: 419 NLAVIK 424 + + Sbjct: 419 GMEKFE 424 >gi|307728953|ref|YP_003906177.1| seryl-tRNA synthetase [Burkholderia sp. CCGE1003] gi|307583488|gb|ADN56886.1| seryl-tRNA synthetase [Burkholderia sp. CCGE1003] Length = 431 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 200/430 (46%), Positives = 272/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYALDVAAFTALEAERRDTQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G AL E + +++ + ++ L L+ +PN+P E VP+G Sbjct: 61 MKGRG--EDTSALMAEVGGIGDEMKASAAKLDDIQKRLSDLLLGVPNLPHESVPVGRDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++G LG +DF+ KLSGARF++L G +A L RAL Q Sbjct: 119 DNVEVRRWGTPRQFDFEVKDHVDVGAPLG-LDFETGAKLSGARFTMLRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE+ P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQQHGYTEIYTPYIVNPEILYGTGQLPKFADDMFRVEKGGGENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRESIVEGNALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVWL QN YREISSC Sbjct: 298 TSYDALEQMVGHAETILQKLELPYRVITLCTGDMGFSATKTYDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +RYR+ K + HTLNGSG+AVGR L+A+LEN+ NADGSVT+P L Sbjct: 358 SNTESFQARRMQARYRNAQGK-PELVHTLNGSGLAVGRTLVAVLENFQNADGSVTVPAAL 416 Query: 414 RPYMNNLAVI 423 RPY+ + + Sbjct: 417 RPYLGGVERL 426 >gi|26990705|ref|NP_746130.1| seryl-tRNA synthetase [Pseudomonas putida KT2440] gi|38258319|sp|Q88FT2|SYS_PSEPK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|24985698|gb|AAN69594.1|AE016593_2 seryl-tRNA synthetase [Pseudomonas putida KT2440] Length = 426 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 196/428 (45%), Positives = 276/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRGQLQEVADRLASRGFSLDVARIESLEERRKAVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L + + +L + E + + L ++ IPN+P VP+G S + Sbjct: 61 AKAKG--EDIAPLMADVERMANELAAGKAELDAIQAELDGILLTIPNLPDASVPVGASED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H +GE G +DF+ A KLSGARF+VL G +A L RAL Q Sbjct: 119 DNVEVRRWGTPKAFDFEIKDHVALGEISGGLDFEAAAKLSGARFAVLRGPVARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LHT EHGY E P +V+ A+ GTGQ+PKF +D+F T +LIPT+EVSL Sbjct: 179 FMINLHTGEHGYEEHYTPYMVQAPALQGTGQLPKFEEDLFKITREGEADFYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL + EI+++K LPL+ P FRSEAG++GRDTRGM+RQHQF K E+V + S Sbjct: 239 TNLVAGEILDAKQLPLKLVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSKSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV++LCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAERVLQLLELPYRVLALCTGDMGFGAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSILVPEVLKPY 418 Query: 417 MNNLAVIK 424 M + VI+ Sbjct: 419 MGGVEVIR 426 >gi|312868969|ref|ZP_07729149.1| serine--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311095533|gb|EFQ53797.1| serine--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 433 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 287/431 (66%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQNP+ L R ++ + + +L+LD+K R L+++ E ++A+RN+ S +IG Sbjct: 1 MLDIKKIRQNPDFYKQKLATRGIQAEEIDEVLALDQKRRDLLQQTETMKAQRNAASKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A G D ET L +++ L+++ L +S +PNVP + VP+ + Sbjct: 61 EAKRNG--ESADEAIKETRELGDKIKQLDEQVEANDEELHDKMSRLPNVPHDGVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + +R VG+ + H+++GE LG++DFDRA K+SG+RF G A LERA+ Sbjct: 119 DGAVELRKVGRIRDFDFEPKHHWDVGEQLGILDFDRAGKVSGSRFVYYLGLGAQLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H + GYTEV P +V ++MYGTGQ PKF + ++ + LIPT+EV LTN Sbjct: 179 NFMLDEH-MKDGYTEVLPPYIVNADSMYGTGQFPKFKEGVYQVNGEDMTLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I + LP+ T L P FRSEAG+AGRDTRG++R HQF K E+V T+ E+S+ E Sbjct: 238 YYRGEVIPEEELPVYVTALTPCFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPENSWDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE ILK+LD+ Y V++L T D+ F+A +T+DLE+W+ Q YRE+SSCS C + Sbjct: 298 LEKMTANAENILKKLDIPYHVITLTTSDMSFTASETHDLELWMPAQKKYREVSSCSNCLD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM+++YRD N K L++ HTLNGSG+AVGR + AILENY NADGSVTIP VL PYM+ Sbjct: 358 FQARRMHTQYRDENGK-LQYVHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLVPYMH 416 Query: 419 NLAVIKKEHIL 429 + I KE+ + Sbjct: 417 GVTKITKENAV 427 >gi|296332946|ref|ZP_06875404.1| seryl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672711|ref|YP_003864382.1| seryl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149910|gb|EFG90801.1| seryl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410954|gb|ADM36072.1| seryl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 425 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 194/427 (45%), Positives = 273/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD + +R N + + L + + + +LD++ R LI K+E+++ +RN S Q+ Sbjct: 1 MLDTKMLRANFQEIKAKLVHKGEDLTDFDKFEALDDRRRELIGKVEELKGKRNEVSQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D + E + E++ L++E V S L ++ IPN+P E VP+G + Sbjct: 61 VLKREKK--DADHIIKEMREVGEEIKTLDEELRAVESELDTILLSIPNIPHESVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++NI +R G+KPS + + H++I + LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNIEVRKWGEKPSFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH E+ YTEV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ SLP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYGE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ Q+ YREISSCS Sbjct: 299 LEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+AVGR + AILENY DGSV IP VLRPYM Sbjct: 359 FQARRANIRFRREAKGKPEHVHTLNGSGLAVGRTVAAILENYQQEDGSVVIPKVLRPYMG 418 Query: 419 NLAVIKK 425 N VIK Sbjct: 419 NKEVIKP 425 >gi|24373862|ref|NP_717905.1| seryl-tRNA synthetase [Shewanella oneidensis MR-1] gi|30173158|sp|Q8EEQ9|SYS_SHEON RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|24348273|gb|AAN55349.1|AE015672_5 seryl-tRNA synthetase [Shewanella oneidensis MR-1] Length = 428 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 202/429 (47%), Positives = 262/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R L R ++ L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELAVTAERLATRGFILDVAHLTQLEEKRKSLQVATEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G VDA+ + L QL + E V + + +PN+P E PIG Sbjct: 61 AKARG--EDVDAIMAQVGDLGAQLDAKKVELAAVLEEVNAIAMSMPNLPDESAPIGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G S ++H ++GE L +DF A K++G+RF V+ G +A L RALGQ Sbjct: 119 ENVEVRRWGSPRSFDFPIKDHIDLGEGLNGLDFKSAVKITGSRFIVMKGQIARLNRALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV + ++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I++ LP++ T FRSEAGS G+DTRG++RQHQF K ELV + + ED Sbjct: 239 PLTNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE +L+RL L YR V LCTGD+GF + KTYD+EVWL GQN YREISSCS Sbjct: 299 SMAALEVLTGHAETVLQRLGLPYRTVVLCTGDMGFGSSKTYDIEVWLPGQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR HTLNGSG+AVGR L+AILENY NADGSVT+P LR Sbjct: 359 NMKDFQARRMQARYRVKADNKPVLLHTLNGSGLAVGRTLVAILENYQNADGSVTVPEALR 418 Query: 415 PYMNNLAVI 423 PYM L I Sbjct: 419 PYMGGLTQI 427 >gi|157691302|ref|YP_001485764.1| seryl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|166987310|sp|A8FAD7|SYS_BACP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157680060|gb|ABV61204.1| serine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 424 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 190/426 (44%), Positives = 272/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R + + + L R + + LD+K R LI K E +++RRN S Q+ Sbjct: 1 MLDIKQLRTDFDQIKEKLAHRGEDLADFDKFGELDQKRRELIGKTEVLKSRRNEVSQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D + E + +++ L+ E V SL+ ++ IPN+P + VP+G + Sbjct: 61 VLKREKK--DADHIIQEMREVGDEIKKLDDELRTVEESLQHILFSIPNIPHDTVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G++P+ + H+++ + L ++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVEVRKWGEQPAFSFEPKPHWDVADELNILDFERAGKVTGSRFVFYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH E G+TEV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMLDLHVDEFGFTEVLPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EIIE + LP+ + + FRSEAGSAGRDTRG++RQHQF K ELV R EDS+ E Sbjct: 239 MHRDEIIEGEQLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVRPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE++L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ Q+ YREISSCS Sbjct: 299 LEKLTNQAEKVLQLLNLPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+AVGR + AILENY DG+V IP VLRPYM Sbjct: 359 FQARRANIRFRPEPKAKPEHVHTLNGSGLAVGRTVAAILENYQQEDGTVIIPEVLRPYMG 418 Query: 419 NLAVIK 424 N V+K Sbjct: 419 NKEVMK 424 >gi|319408334|emb|CBI81987.1| Seryl-tRNA synthetase [Bartonella schoenbuchensis R1] Length = 425 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 245/424 (57%), Positives = 314/424 (74%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD ALK R +EPQ++ ++ LD + R + KI+ + RRN S +IGQ Sbjct: 1 MLDIKWIRENPEKLDAALKNRGIEPQAQRLIELDLERRSHVAKIQCAQERRNVASKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A G+ + +K E +K+ L EE ++ +L+K +S IPN+PL +VP G + Sbjct: 61 ALAAGDQKNAERIKAEVEEIKDFLSSASMEEKQLTENLEKTLSAIPNIPLNDVPKGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+++R G + +EHF++G+ L MDF++A++LSGARF+VL+G LA LERALGQ Sbjct: 121 ANVVVRHFGTPTTFDFTPKEHFDLGQNLQQMDFEQASRLSGARFTVLSGALARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+H EHGYTEVS PLLVRDE +YG GQ+PKF+DD+F TTDG+WLI T+EV L NL Sbjct: 181 FMLDMHVDEHGYTEVSVPLLVRDEIVYGAGQLPKFSDDLFQTTDGKWLISTAEVPLVNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + E+++ LPLRF++L P FRSEAG+AGRDTRGMLRQHQFWK E+VSIT EE S E E Sbjct: 241 NSEVLDISDLPLRFSSLTPCFRSEAGAAGRDTRGMLRQHQFWKVEMVSITTEEQSLIELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +LKRL L +R V L TGD+GF+A KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 301 RMTECAENVLKRLGLPFRTVLLSTGDMGFAARKTYDIEVWLPGQRCYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR K+L F HTLNGSG AVGRCLIAILENY ADGSV +P VL+PYM + Sbjct: 361 GRRMNARYRTKGEKTLHFVHTLNGSGTAVGRCLIAILENYQQADGSVIVPDVLQPYMKGI 420 Query: 421 AVIK 424 + + Sbjct: 421 SRLT 424 >gi|225181881|ref|ZP_03735316.1| seryl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] gi|225167395|gb|EEG76211.1| seryl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] Length = 426 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 184/422 (43%), Positives = 263/422 (62%), Gaps = 3/422 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R N + + AL + E + +DEK R L+ ++E ++ +RN S Q+ Q Sbjct: 1 MLDLKFVRDNLDVVRKALDDKGEEAAIDQFAEVDEKRRSLLHEVEQLKQKRNKVSEQVAQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + E + +++ ++ + V L++++ +PN+P ++VP+G + Sbjct: 61 MKRSG--EDASGVIEEMRAVSQKIKEMDNDVRNVDDELQQILLTLPNIPHKDVPVGQTEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + ++ H++I L ++DF+RA K++G RF+ G A LERAL Sbjct: 119 ENVAVRHFGEPTTFDFEAKPHWDIAANLDIIDFERAGKVTGTRFAFYKGQGAQLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +EHGYTE+ P +V E+M GTGQ+PKF +D F D + IPT+EV +TNL Sbjct: 179 FMLDLHITEHGYTEIFPPFMVHRESMVGTGQLPKFEEDAFRVADTDYFLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI + LP + + FR+EAG+ GRDTRG++RQHQF K ELV R +DS E Sbjct: 239 HREEIFTEEDLPKHYVAYSACFRAEAGAHGRDTRGLIRQHQFNKVELVKFARPQDSMQEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + + AEEILKRL L Y+ + +CT DLGF+A K YDLEVWL N YREISSCS G+F Sbjct: 299 ETLTANAEEILKRLGLPYQTMLMCTADLGFAAAKKYDLEVWLPAYNTYREISSCSNFGDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R+R +F HTLNGSGVAVGR + AILENY DG+V IP LRPYM Sbjct: 359 QARRAGIRFRPAQGGKAEFVHTLNGSGVAVGRTVAAILENYQQEDGTVLIPEPLRPYMPG 418 Query: 420 LA 421 L Sbjct: 419 LK 420 >gi|260581970|ref|ZP_05849765.1| seryl-tRNA synthetase [Haemophilus influenzae NT127] gi|260094860|gb|EEW78753.1| seryl-tRNA synthetase [Haemophilus influenzae NT127] Length = 429 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 192/431 (44%), Positives = 262/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEIAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + R+L Sbjct: 119 TENKEILRWGTPRTFDFEVKDHVTLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRSLA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALQGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLDVIGK 429 >gi|114562974|ref|YP_750487.1| seryl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] gi|122299903|sp|Q083B6|SYS_SHEFN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|114334267|gb|ABI71649.1| seryl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] Length = 428 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 193/429 (44%), Positives = 264/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R E L R + + L+EK + L ED++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELEITAERLATRGFILDVDNLTKLEEKRKSLQVATEDLQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ + L QL + E E+ + + +PN+P E P+G N Sbjct: 61 AKARG--EDTSSIMAQVGDLGAQLDSKKAELAELLQQINSIAMSVPNLPDESAPVGADEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++GEAL +DF A K+SG+RF ++ G +A L RALGQ Sbjct: 119 DNVEVRRWGTPKVFDFEVKDHIDLGEALEGLDFKNAVKISGSRFIIMRGQIARLNRALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV +E++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTETYVPLLVNEESLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTN I++ LP++ T L P FRSEAGS GRDTRG++R HQF K ELV I + Sbjct: 239 PLTNYVRDMIVDETELPMKMTALTPCFRSEAGSYGRDTRGVIRLHQFDKVELVQIAHPDH 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + S AE++L+ L+L YR + LCTGD+GF + KT+D+EVWL QN YREISSCS Sbjct: 299 SMQALEDITSHAEKVLQLLNLPYRTMVLCTGDMGFGSSKTFDIEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR HTLNGSG+AVGR L+A++ENY N DG++T+P LR Sbjct: 359 NMKDFQARRMQARYRSKADNKPALLHTLNGSGLAVGRTLVAVIENYQNQDGTITVPEALR 418 Query: 415 PYMNNLAVI 423 PYM L++I Sbjct: 419 PYMGGLSLI 427 >gi|170722569|ref|YP_001750257.1| seryl-tRNA synthetase [Pseudomonas putida W619] gi|229890231|sp|B1JBE0|SYS_PSEPW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|169760572|gb|ACA73888.1| seryl-tRNA synthetase [Pseudomonas putida W619] Length = 426 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 276/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRGQLQEVADRLASRGFSLDVARIESLEERRKAVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L + + +L + E + + L ++ IPN+P VP+G S + Sbjct: 61 AKAKG--EDIAPLMADVERMANELAAGKVELDGIQAELDGIVLTIPNLPDASVPVGASED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H +GE G +DF+ A KLSGARF+VL G +A L RAL Q Sbjct: 119 DNVEVRRWGTPRAFDFAIKDHVALGEISGGLDFEAAAKLSGARFAVLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LHT EHGY E P LV+ A+ GTGQ+PKF +D+F T +LIPT+EVSL Sbjct: 179 FMINLHTGEHGYEEHYTPYLVQAPALQGTGQLPKFEEDLFKITREGEADFYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL + EII++K LPL+ P FRSEAG++GRDTRGM+RQHQF K E+V + S Sbjct: 239 TNLVAGEIIDAKQLPLKLVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSKSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV++LCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAERVLQLLELPYRVLALCTGDMGFGAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVIK 424 M + VI+ Sbjct: 419 MGGVEVIR 426 >gi|15893319|ref|NP_346668.1| seryl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|30173201|sp|Q97N17|SYS1_CLOAB RecName: Full=Seryl-tRNA synthetase 1; AltName: Full=Serine--tRNA ligase 1; Short=SerRS 1; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase 1 gi|15022840|gb|AAK78008.1|AE007515_8 Seryl-tRNA synthetase (serine-tRNA ligase) [Clostridium acetobutylicum ATCC 824] gi|325507428|gb|ADZ19064.1| seryl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 424 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 181/427 (42%), Positives = 270/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR NPE + AL R + + ++SLDE+ R + ++E+++++RN +S + Sbjct: 1 MLDLKRIRTNPEEIKKALTNRGEDFDISVIDELVSLDEERRKNLVEVENLKSKRNKDSGE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G + D L E + + + ++ + E+ ++ ++ IPN+P VP G Sbjct: 61 IAKLKKSGQNA--DELLAEMKKISDDIKGIDAKVSEIDEKMQYIMLRIPNIPHPSVPEGK 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S EN+ IR G+ + H++IG LGL+DF+R K++G+RF+ G A LERA Sbjct: 119 SDEENVEIRKWGEPRKFDFEFKAHWDIGTDLGLLDFERGGKVAGSRFTFYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 + + +D H +HGYTE+ P +V +M GTGQ+PKF +D F +G +LIPT+EV +T Sbjct: 179 VINYFLDTHVEKHGYTEILPPYMVNRVSMTGTGQLPKFEEDAFKVDNGFFLIPTAEVPVT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ EI++++ LP +F + FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ Sbjct: 239 NMFRDEILKAEDLPYKFAAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFAKPEESYD 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E++ AEEIL+ L++ YRVV +C GDLGF+A YD+EVW+ Y EISSCS Sbjct: 299 ELEKLTHDAEEILQILNIPYRVVRICKGDLGFTAALKYDIEVWMPSYGRYVEISSCSNFE 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N ++R +F HTLNGSG+AVGR + AILENY N DGSV +P L+ Y+ Sbjct: 359 DFQARRANIKFRRDPKAKPEFVHTLNGSGLAVGRTVAAILENYQNEDGSVNVPEALKKYI 418 Query: 418 NNLAVIK 424 VI+ Sbjct: 419 -GKDVIR 424 >gi|257785136|ref|YP_003180353.1| seryl-tRNA synthetase [Atopobium parvulum DSM 20469] gi|257473643|gb|ACV51762.1| seryl-tRNA synthetase [Atopobium parvulum DSM 20469] Length = 427 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 200/428 (46%), Positives = 281/428 (65%), Gaps = 3/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R+NP+ +D A + R + E LDE+ R +I ++E ++A RN+ S QIG Sbjct: 1 MLDIKFVRENPDLVDKACESRQNAHWDREKFFELDEERRSVISEVETLQAERNAVSKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG +A K + + K+ + L++ EV L L++ IPN+P VP G Sbjct: 61 LLMREGKKEEAEAAKEQVAANKDHIARLDQRRGEVEEELTALVAAIPNIPDASVPYGKDD 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N +R G+ + H+++G LG++DFDR KL+G RF +L G A +ERAL Sbjct: 121 SDNPEVRKWGEPTQFDFEPKAHWDLGPELGMIDFDRGVKLAGTRFYLLGGMGARMERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 FMID H ++ G+ E P++ +++YGTGQ+PKF +D++ +LIPT+EV LTN+ Sbjct: 181 NFMIDTH-NQAGFKEWWPPVITNQDSLYGTGQLPKFEEDLYHVQPDLYLIPTAEVQLTNI 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+++ LPL +T P FR EAGSAGRDTRG++R HQF K E+V + EDS + Sbjct: 240 HRDEILDASQLPLLYTAFTPCFREEAGSAGRDTRGIIRVHQFDKVEMVKFAKPEDSMNQL 299 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M+ AE+IL+ L L Y VV+LCTGD+GFSACK YD+EVWL N Y+EISSCS C +F Sbjct: 300 ESMVQEAEKILQLLGLPYHVVTLCTGDIGFSACKCYDIEVWLPSYNAYKEISSCSNCWDF 359 Query: 360 QSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RR N RY+DP K + HTLNGSG+AVGR + AI+ENY NADGSVT+P VLRPYM Sbjct: 360 QARRANIRYKDPAEFKGTRLVHTLNGSGLAVGRTMAAIMENYQNADGSVTVPEVLRPYMG 419 Query: 419 NLAVIKKE 426 + VI+ E Sbjct: 420 GIEVIRPE 427 >gi|297528389|ref|YP_003669664.1| seryl-tRNA synthetase [Geobacillus sp. C56-T3] gi|297251641|gb|ADI25087.1| seryl-tRNA synthetase [Geobacillus sp. C56-T3] Length = 424 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 192/426 (45%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R + + L +R + + LD+ R LI ++E+++++RN S QI Sbjct: 1 MLDMKVLRTQFQEVKEKLMQRGGDLTNIDRFEQLDKDRRRLIAEVEELKSKRNDVSQQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E + L + + +++ ++++ ++ + L L+ IPNVP E VPIG S Sbjct: 61 VLKREKK--DAEPLIAQMREVGDRIKRMDEQIRQLEAELDDLLLSIPNVPHESVPIGQSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ S + H+EI + LGL+DF+RA K++G+RF G A LERAL Sbjct: 119 EDNVEVRRWGEPRSFSFEPKPHWEIADRLGLLDFERAAKVAGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D+H E GY EV P LV +M GTGQ+PKFA+D F + IPT+EV +TN Sbjct: 179 NFMLDIHLDEFGYEEVLPPYLVNRASMIGTGQLPKFAEDAFHLDSEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ + LP+ + + FR+EAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 LHRDEILAADDLPIYYAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+RL L YRVV+LCTGDLGFSA KTYD+EVWL YREISSCS Sbjct: 299 LEKLTRQAETILQRLGLPYRVVALCTGDLGFSAAKTYDIEVWLPSYGTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY DGSV +P LRPYM Sbjct: 359 FQARRANIRFRRDPKAKPEYVHTLNGSGLAIGRTVAAILENYQQEDGSVIVPEALRPYMG 418 Query: 419 NLAVIK 424 N VI+ Sbjct: 419 NRDVIR 424 >gi|257871364|ref|ZP_05651017.1| seryl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257805528|gb|EEV34350.1| seryl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 425 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 281/427 (65%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQN + + L+ R ++ + E L LDE+ R L+ + E+++ RN SA+I Sbjct: 1 MLDIKMIRQNFDKVQTKLQTRGVKKEVLEEFLKLDERRRQLLVETEELKKVRNEVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + D E + ++ L+ E ++ S +K + + +PN+P + VP+G Sbjct: 61 QLKRAKKAA--DNKITEMKEVGTKIKSLDDEIAKIDSEIKLIATTLPNLPHDSVPVGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R ++ H++I E LG++DF+R K++G+RF G A LERAL Sbjct: 119 DDNVEVRRWATPKEFDFEAKPHWDIAENLGILDFERGAKVAGSRFVYYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F G LIPT+EV LTN Sbjct: 179 NFMLDQHVYEHGYTEMITPYIVNSDAMFGTGQFPKFKEDVFQLAETGLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 239 YYNGEILDLDQLPVYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKLSEAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTANAEDILQKLQLPYRVMALSTGDMGFSAAKTYDLEVWIPAQETYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD + K + + HTLNGSG+AVGR + A+LENY N DGSVTIP VL PYM Sbjct: 359 FQARRAMIRYRDNDGK-IHYMHTLNGSGLAVGRTVAAVLENYQNEDGSVTIPEVLVPYMG 417 Query: 419 NLAVIKK 425 + I+K Sbjct: 418 GVTRIEK 424 >gi|220934363|ref|YP_002513262.1| seryl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] gi|254783500|sp|B8GQ80|SYS_THISH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|219995673|gb|ACL72275.1| seryl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7] Length = 426 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 191/426 (44%), Positives = 265/426 (62%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R E L +R + +E L+ + + + +++++ RNS S IGQ Sbjct: 1 MLDPKRLRNELEETAARLARRGFQLDTETFARLEAERKQIQVHTQELQSERNSRSKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ LK E S + E L E + + L + + IPNVP VP G Sbjct: 61 AKARG--EDIEPLKAEVSRMGEALAEAETRLSALQAELDEFLMGIPNVPHASVPDGLDEK 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G+ R+H +GE G +DF+ KL+GARF+V G +A L RAL Q Sbjct: 119 SNVEIRRWGEPRRFDFPVRDHVALGEPKGWLDFETGAKLAGARFTVKRGDMARLHRALVQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTNL 239 FM+DLHT EHGY EV P LV +++ GTGQ+PKF D+F ++ +LIPT+EV +TNL Sbjct: 179 FMLDLHTREHGYEEVYVPYLVNADSLRGTGQLPKFEADLFHISEHGYYLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 I+E+ +P RF + P FRSEAGS G+D RG++RQHQF K ELV + E S+ Sbjct: 239 ARDTILEAAQVPARFVSHTPCFRSEAGSYGKDVRGLIRQHQFEKVELVQLVPAEQSWDAL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AE++L++L+L YRV++LC GD+GFS+ KTYD+EVWL GQ YREISSCS +F Sbjct: 299 EALTGHAEKVLQKLELPYRVMALCAGDMGFSSAKTYDIEVWLPGQETYREISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RRM +RYR+P + + HTLNGSG+AVGR L+A+LEN+ +A G + IP LRPYM Sbjct: 359 QARRMLARYRNPETGKPELLHTLNGSGLAVGRTLVAVLENHQDAQGRIHIPEALRPYMGG 418 Query: 420 LAVIKK 425 L V+ Sbjct: 419 LEVMDP 424 >gi|256848554|ref|ZP_05553995.1| seryl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256714606|gb|EEU29586.1| seryl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 435 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 284/431 (65%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+ P+ L R ++ + + +L LD+K R L++K+E ++A+RN S +IG Sbjct: 1 MLDIKKIRRQPDWFKEKLATRGIDASEIDEVLELDQKRRELLQKVEALKAQRNEASKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A G + + ET L +Q+ L+++ +S +PNVP ++VP+ + Sbjct: 61 EAKRNGQSA--EEAIKETRDLGDQIKGLDEKVEANDEVFYDKMSRLPNVPHDDVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + +R VG+ + H+++GE LG++DFDRA K+SGARF G A LERA+ Sbjct: 119 DGAVELRKVGQVRDFDFEPKHHWDVGENLGILDFDRARKVSGARFVYYLGLGAQLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H + GYTEV P +V ++MYGTGQ PKF + ++ + LIPT+EV LTN Sbjct: 179 NFMLDEH-MKDGYTEVLPPYIVNAKSMYGTGQFPKFKEGVYQVNGEDMTLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++I + LP+ T L P FRSEAG+AGRDTRG++R HQF K E+V T+ EDS+ E Sbjct: 238 YYRGDVIPEQELPVYVTALTPCFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPEDSWDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE ILK+L L Y V++L + D+ F+A T+DLE+W+ QN YRE+SSCS C + Sbjct: 298 LEKMTANAENILKKLGLPYHVITLTSSDMSFTASMTHDLELWMPAQNKYREVSSCSNCLD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM+++YRD + K L + HTLNGSG+AVGR + AILENY NADGSVTIP VL PYM+ Sbjct: 358 FQARRMHTQYRDADGK-LHYVHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLVPYMH 416 Query: 419 NLAVIKKEHIL 429 + I KE+ + Sbjct: 417 GVKKITKENAV 427 >gi|303228838|ref|ZP_07315651.1| serine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302516458|gb|EFL58387.1| serine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 426 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 271/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N E + L RH + + ++ ++ + LI+K+E+++A RNS + +I Q Sbjct: 1 MLDLKFVRENLELVKQNLDNRHTKGDLDTFVAAYDERKQLIQKVEELKALRNSVTEEISQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N D E + +++ L+ EV SL+ +PN+ VP+G + Sbjct: 61 LKR--NKENADDKIAEMKRVGDEISELDGRIREVEESLRNAALMLPNMCDASVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ R G+ + H++IGE L ++DF+RA K+SGARF+V G A LERAL Sbjct: 119 ENVEQRKWGEPRQFDFEPKAHWDIGEELDILDFNRAVKMSGARFTVYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH + GYTE+ P +V E + GTGQ+PKFA+DM+ + + IPT+EV+LTN Sbjct: 179 FMVDLHVDKQGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVENTEYFLIPTAEVTLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EI+ LP +T FR+EAGSAGRDTRG++RQHQF K E+V +++ EDS+ E Sbjct: 239 HSGEILSEDELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLSKPEDSWNEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEE+L+ L+L +RV++LCTGD+GF + KTYD+EVW+ QN YREISSCS +F Sbjct: 299 EKLTDNAEEVLRLLELPFRVITLCTGDIGFGSAKTYDVEVWMPAQNKYREISSCSNMTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSG+AVGR + AILEN DGSV IP VL PYM Sbjct: 359 QARRANIKFRRGPKGKPEFVHTLNGSGLAVGRTVAAILENNQQPDGSVVIPKVLVPYMGG 418 Query: 420 LAVIKK 425 + I Sbjct: 419 VEKITP 424 >gi|296162244|ref|ZP_06845039.1| seryl-tRNA synthetase [Burkholderia sp. Ch1-1] gi|295887511|gb|EFG67334.1| seryl-tRNA synthetase [Burkholderia sp. Ch1-1] Length = 431 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 201/431 (46%), Positives = 275/431 (63%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFTALEAERRDTQTRTEEMQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E S + +++ E+ L ++ +PN+P E VP+G Sbjct: 61 LKGKG--EDTSAVMAEVSGIGDEMKASAARLDEIQKRLSDMLLGVPNLPHESVPLGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF++L G +A L RAL Q Sbjct: 119 ENVEVRRWGTPRQFEFEVKDHVDVGAPLG-LDFETGAKLSGARFTMLRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT HGYTE+ P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQHHGYTEIYTPYIVNPEILYGTGQLPKFADDMFRVERGGDENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E+ +LP++ T +P FRSEAGS GRDTRG++RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSIVEADALPIKLTAHSPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSC Sbjct: 298 TSYDALEQMVGHAETILQKLELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +RYR+ K + HTLNGSG+AVGR L+A+LEN+ NADGSVT+PT L Sbjct: 358 SNTESFQARRMQARYRNAQGK-PELVHTLNGSGLAVGRTLVAVLENFQNADGSVTVPTAL 416 Query: 414 RPYMNNLAVIK 424 RPY+ L ++ Sbjct: 417 RPYLGGLERLE 427 >gi|315122209|ref|YP_004062698.1| seryl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495611|gb|ADR52210.1| seryl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 432 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 344/425 (80%), Positives = 385/425 (90%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQWIRQNP+ DIALKKR+LEPQSE ILSLD + R LI++IE IRA+RNS S QIGQ Sbjct: 1 MLDIQWIRQNPDTFDIALKKRNLEPQSECILSLDTQYRSLIRQIEKIRAQRNSKSEQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 AIA+GNL L D +K E ST+KEQLP+LE +E+E+ SSL +++SCIPN+PLE+VPIG + Sbjct: 61 AIAKGNLLLADTIKAEVSTIKEQLPLLEAKENEIKSSLNQILSCIPNIPLEDVPIGANEK 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ENILIRSVG KP+AIHLS+EHFEIGE LGLMDFDR+ KLSGARFS+L HLA LERALGQ Sbjct: 121 ENILIRSVGNKPNAIHLSKEHFEIGEELGLMDFDRSAKLSGARFSILASHLALLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHTSEHGYTEVSAPLLVRDEAMYGTGQ+PKFA+DMFCTTDGRWLIPTSEVSLTN++ Sbjct: 181 FMLDLHTSEHGYTEVSAPLLVRDEAMYGTGQLPKFANDMFCTTDGRWLIPTSEVSLTNIF 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S+EII+ LPLR LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT+EE+S EHE Sbjct: 241 SNEIIDFNLLPLRLVALAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITKEEESHIEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RMLSCAE++LK+LDLHYR+VSLC+GDLGFSACKTYDLEVWL GQNLYREISSCS CG+FQ Sbjct: 301 RMLSCAEKVLKKLDLHYRIVSLCSGDLGFSACKTYDLEVWLPGQNLYREISSCSNCGSFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 SRRMNSRYRD +KSLKFTHTLNGSGVAVGRCLIAILENYLN DGSVTIPT+LRPYM+NL Sbjct: 361 SRRMNSRYRDSFNKSLKFTHTLNGSGVAVGRCLIAILENYLNKDGSVTIPTILRPYMHNL 420 Query: 421 AVIKK 425 VIKK Sbjct: 421 EVIKK 425 >gi|313498111|gb|ADR59477.1| SerS [Pseudomonas putida BIRD-1] Length = 426 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 196/428 (45%), Positives = 276/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRGQLQEVADRLASRGFSLDVARIESLEERRKAVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L + + +L + E + + L ++ IPN+P VP+G S + Sbjct: 61 AKAKG--EDIAPLMADVERMANELAAGKAELDAIQAELDGILLTIPNLPDASVPVGASED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H +GE G +DF+ A KLSGARF+VL G +A L RAL Q Sbjct: 119 DNVEVRRWGTPKAFDFEIKDHVALGEISGGLDFEAAAKLSGARFAVLRGPVARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LHT EHGY E P +V+ A+ GTGQ+PKF +D+F T +LIPT+EVSL Sbjct: 179 FMINLHTGEHGYEEHYTPYMVQAPALQGTGQLPKFEEDLFKITREGEADFYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL + EI+++K LPL+ P FRSEAG++GRDTRGM+RQHQF K E+V + S Sbjct: 239 TNLVAGEILDAKQLPLKLVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPAKSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV++LCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAERVLQLLELPYRVLALCTGDMGFGAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSILVPEVLKPY 418 Query: 417 MNNLAVIK 424 M + VI+ Sbjct: 419 MGGVEVIR 426 >gi|321313681|ref|YP_004205968.1| seryl-tRNA synthetase [Bacillus subtilis BSn5] gi|320019955|gb|ADV94941.1| seryl-tRNA synthetase [Bacillus subtilis BSn5] Length = 425 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 192/427 (44%), Positives = 273/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD + +R N + + L + + + +LD++ R LI K+E+++ +RN S Q+ Sbjct: 1 MLDTKMLRANFQEIKAKLVHKGEDLTDFDKFEALDDRRRELIGKVEELKGKRNEVSQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D + E + E++ L++E V + L ++ IPN+P E VP+G + Sbjct: 61 VLKREKK--DADHIIKEMREVGEEIKKLDEELRTVEAELDTILLSIPNIPHESVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+KPS + + H++I + LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVEVRKWGEKPSFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH E+ YTEV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ SLP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ Q+ YREISSCS Sbjct: 299 LEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+AVGR + AILENY DGSV IP VLRPYM Sbjct: 359 FQARRANIRFRREAKGKPEHVHTLNGSGLAVGRTVAAILENYQQEDGSVVIPKVLRPYMG 418 Query: 419 NLAVIKK 425 N VIK Sbjct: 419 NREVIKP 425 >gi|119897660|ref|YP_932873.1| seryl-tRNA synthetase [Azoarcus sp. BH72] gi|166200598|sp|A1K581|SYS_AZOSB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|119670073|emb|CAL93986.1| SerS protein [Azoarcus sp. BH72] Length = 430 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 195/432 (45%), Positives = 269/432 (62%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + L R + S +L+++ + L + ++++A+RN+ S QIG Sbjct: 1 MLDIQLLRGQLSQVAERLALRGVTLDSGAFTALEDERKQLQTRTQELQAKRNALSKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E L ++L E+ V L ++ +PN+P E VP+G Sbjct: 61 LKGKG--EDASAVMAEVGQLGDELKACEQALPVVLEKLNAFLAGLPNLPQEGVPVGEDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G S ++H ++G ALG +DFD KLSG+RF+ + G +A L RAL Q Sbjct: 119 GNVEVRRWGTPRSFDFEVKDHVDLGAALG-LDFDTGAKLSGSRFTFMRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D T EHGYTE AP +V E + GTGQ+PKF +DMF ++LI TSE Sbjct: 178 FMLDTQTLEHGYTECYAPYIVNREVLVGTGQLPKFKEDMFWVLRGGDEEGGEQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 + LTN +I+ + +LP++ T +P FRSEAGSAGRDTRGM+RQHQF K E+V I + Sbjct: 238 IPLTNTVREQILAADALPIKLTAHSPCFRSEAGSAGRDTRGMIRQHQFDKVEMVQIVHPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVWL QN YREISSC Sbjct: 298 ASNAALEEMVGHAEAILQKLELPYRVITLCTGDMGFSAAKTYDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C FQ+RRM +R++ K+ + HTLNGSG+AVGR L+A+LENY ADGS+ +P L Sbjct: 358 SNCEAFQARRMQARFKTAQGKN-ELVHTLNGSGLAVGRTLVAVLENYQQADGSIVVPKAL 416 Query: 414 RPYMNNLAVIKK 425 PYM L V++ Sbjct: 417 VPYMGGLEVLRP 428 >gi|294496887|ref|YP_003560587.1| seryl-tRNA synthetase [Bacillus megaterium QM B1551] gi|295702254|ref|YP_003595329.1| seryl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294346824|gb|ADE67153.1| seryl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294799913|gb|ADF36979.1| seryl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 425 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 189/427 (44%), Positives = 264/427 (61%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++++R N + LK R + LD K R LI + E+++++RN S QI Sbjct: 1 MLDLKFLRANFNEVKEKLKFRGEDLTDLGRFEELDAKRRELIAQTEELKSKRNEVSQQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q E D L E + +++ L++E V L+ L+ IPNVP E P+G + Sbjct: 61 QLKREKQ--DADHLIVEMREVGDRVKQLDEELRSVEEELELLLLSIPNVPHESTPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+ + H+++G L ++DF+RA+K++G+RF G A LERAL Sbjct: 119 DDNVEVRKWGEIKQFDFEPKPHWDLGTDLNILDFERASKVTGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH EHGY E+ P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMMDLHMDEHGYEEILPPYMVNRTSMTGTGQLPKFEEDAFKIKEEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ LP+ +T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 LHRDEILSGDQLPIAYTAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE++L+ L L YRV+S+CT DLGF+A K YD+EVW+ YREISSCS + Sbjct: 299 LEKLTGHAEKVLQLLGLPYRVLSMCTADLGFTAAKKYDIEVWIPSYETYREISSCSNFES 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+A+GR + AILENY DGS+ IP VLRPYM Sbjct: 359 FQARRANIRFRRDTKAKPEHVHTLNGSGLAIGRTVAAILENYQQEDGSIQIPEVLRPYMG 418 Query: 419 NLAVIKK 425 N I K Sbjct: 419 NKEFISK 425 >gi|271500826|ref|YP_003333851.1| seryl-tRNA synthetase [Dickeya dadantii Ech586] gi|270344381|gb|ACZ77146.1| seryl-tRNA synthetase [Dickeya dadantii Ech586] Length = 431 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 196/432 (45%), Positives = 270/432 (62%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIAL-KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R + + L +R+ + E + L+E+ ++L + E+++A RNS S +IG Sbjct: 1 MLDPNLLRNELDAVAEKLLARRNFKLDVEALRKLEERRKVLQVETENLQAERNSRSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + G ++ L+ E +TL E+L + E ++ + ++ + IPN+P + VP+G Sbjct: 61 AAKSRG--EDIEPLRREVNTLGERLDAAKVELEQIQNEIQSIALTIPNMPDDCVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN + G+ R+H ++GE G + KL+G+RFSV+ G +A L RAL Sbjct: 119 SENQEVMRWGEPRQFDFPVRDHVDLGELTGGLSMALGVKLTGSRFSVMRGQIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPT 231 QFM++LHT+EHGY E P LV +YGTGQ+PKF +D+F T LIPT Sbjct: 179 QFMLNLHTAEHGYEEAYVPYLVNHATLYGTGQLPKFKEDLFHTRPLEEEADSSNYALIPT 238 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV LTNL EI++ +SLP++ T P FRSEAGS GRD RG++R HQF K E+V I R Sbjct: 239 AEVPLTNLVRDEILDEESLPIKMTAHTPCFRSEAGSYGRDMRGLIRVHQFDKVEMVQIVR 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS E + AE++L+ L L YR V LC+GD+GF ACKTYDLEVWL QN YREIS Sbjct: 299 PEDSMQALEELTGHAEKVLQLLKLPYRKVLLCSGDMGFGACKTYDLEVWLPAQNTYREIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS CG+FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY ADG + +P Sbjct: 359 SCSNCGDFQARRMLARCRSKGDKKTRLVHTLNGSGLAVGRALVAVLENYQQADGRIEVPE 418 Query: 412 VLRPYMNNLAVI 423 VLRPYMN I Sbjct: 419 VLRPYMNGAQFI 430 >gi|148547068|ref|YP_001267170.1| seryl-tRNA synthetase [Pseudomonas putida F1] gi|166223272|sp|A5W1H6|SYS_PSEP1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|148511126|gb|ABQ77986.1| seryl-tRNA synthetase [Pseudomonas putida F1] Length = 426 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 275/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRGQLQEVADRLASRGFSLDVARIESLEERRKAVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L + + +L + E + + L ++ IPN+P VP+G S + Sbjct: 61 AKAKG--EDIAPLMADVERMANELAAGKAELDAIQAELDSILLTIPNLPDASVPVGASED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H +GE +DF+ A KLSGARF+VL G +A L RAL Q Sbjct: 119 DNVEVRRWGTPKAFDFEIKDHVALGEISRGLDFEAAAKLSGARFAVLRGPVARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LHT EHGY E P +V+ A+ GTGQ+PKF +D+F T +LIPT+EVSL Sbjct: 179 FMINLHTGEHGYEEHYTPYMVQAPALQGTGQLPKFEEDLFKITREGEADFYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL + EI+++K LPL+ P FRSEAG++GRDTRGM+RQHQF K E+V + S Sbjct: 239 TNLVAGEILDAKQLPLKLVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSKSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV++LCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAERVLQLLELPYRVLALCTGDMGFGAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSILVPEVLKPY 418 Query: 417 MNNLAVIK 424 M + VI+ Sbjct: 419 MGGVEVIR 426 >gi|148657569|ref|YP_001277774.1| seryl-tRNA synthetase [Roseiflexus sp. RS-1] gi|166223283|sp|A5UYX1|SYS_ROSS1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|148569679|gb|ABQ91824.1| seryl-tRNA synthetase [Roseiflexus sp. RS-1] Length = 424 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 181/428 (42%), Positives = 266/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+ P+ + +L + ++P Q + +L+ DE+ R L++++E ++A RN+ S +IG Sbjct: 1 MLDIRLIREQPDLVKASLGRTGVDPAQVDAVLAYDEQRRALLREVEQLKALRNAVSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + DA E + +++ L++E V + + N+P VP G Sbjct: 61 KM---SDAAARDAKIAEMRAVGDRIAELDRELAAVEEQQYAALMELRNLPHPSVPDGPDE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N++I G+ + + H+E+GEAL ++DF+R KLSG+RF VL G A L+RAL Sbjct: 118 TYNVVIAQEGEPRTFDFTPKPHWELGEALDIIDFERGVKLSGSRFYVLKGPGARLQRALI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q+M+DLH + GY EV P +V+++ M+G Q+PKF D+++ D WL+PT+EV +TN Sbjct: 178 QWMLDLH-GKQGYDEVYTPFVVKEQCMWGARQLPKFRDNLYRDVEDDLWLVPTAEVPVTN 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+++ LPLR+ P FR E SAGRD RG+ R HQF K E+ R E S+ E Sbjct: 237 LHRDEILDADQLPLRYCAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYMFVRPETSYDE 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AEE + L L +R LCTGDLGF+A +TYD+EVW GQ + E+SSCS Sbjct: 297 LEKLRADAEETCRLLGLPFRTKELCTGDLGFAATRTYDIEVWAPGQGEWLEVSSCSNVEA 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+R N RYR ++ HTLNGSG+ + R LIAILENY ADGSV IP VLRPYM Sbjct: 357 FQARAANIRYRPEPGARPEYVHTLNGSGLGLPRTLIAILENYQQADGSVVIPEVLRPYMG 416 Query: 419 NLAVIKKE 426 + VI++ Sbjct: 417 GIEVIRRT 424 >gi|17547056|ref|NP_520458.1| seryl-tRNA synthetase [Ralstonia solanacearum GMI1000] gi|30173189|sp|Q8XWY3|SYS_RALSO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|17429357|emb|CAD16044.1| probable seryl-trna synthetase protein [Ralstonia solanacearum GMI1000] Length = 438 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 202/440 (45%), Positives = 274/440 (62%), Gaps = 19/440 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R E +L+ + + + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDIDAVAARLNDRGYELDVAGFAALEAERKAIQTRTEELQARRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + + ++L + V L+ L+ IPNVP E VP G S Sbjct: 61 LKGKG--EDASAVMAEVAGIGDELKASAAQLDVVQGRLQDLLLSIPNVPHESVPAGKSEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + ++H ++G LG +DFD A KLSG+RF+VL G +A L RAL Q Sbjct: 119 ENVEVRREGTPRAFDFPVKDHVDLGAGLG-LDFDVAAKLSGSRFAVLKGPVARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------------G 225 FM+D HT EHGYTE P +V +M GTGQ+PKF +D+F Sbjct: 178 FMLDTHTQEHGYTEAYVPYIVNAASMRGTGQLPKFEEDLFRVPRKMGQATEAEAGEHVEN 237 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPT+EV LTNL EI+ +LP++F +P FRSEAGS G+DTRGM+RQHQF K E Sbjct: 238 FYLIPTAEVPLTNLVRDEIVAGDALPMKFAAHSPCFRSEAGSYGKDTRGMIRQHQFDKVE 297 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I + E SF + M AE IL++L+L +R V LCTGD+GF + KTYD+EVW+ QN Sbjct: 298 MVQIVQPETSFEALDAMTHHAENILRKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQN 357 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISSCS G+FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADG Sbjct: 358 TYREISSCSNMGDFQARRMQARFRNAQGK-PELLHTLNGSGLAVGRTLVAVLENYQNADG 416 Query: 406 SVTIPTVLRPYMNNLAVIKK 425 SVT+P LRPY+ AV+K Sbjct: 417 SVTVPAALRPYLGGQAVLKP 436 >gi|262369374|ref|ZP_06062702.1| seryl-tRNA synthetase [Acinetobacter johnsonii SH046] gi|262315442|gb|EEY96481.1| seryl-tRNA synthetase [Acinetobacter johnsonii SH046] Length = 425 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 196/425 (46%), Positives = 272/425 (64%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E +++AL KR ++ E SL+ + + + K E ++A RNS + Q+GQ Sbjct: 3 MIDPKLLRNNIEAVNLALAKRGVQLNVEEWASLEVRRKEIQSKTESLQAERNSGAKQVGQ 62 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + S + +++ E E+ + L+ IPN+P E VP G + Sbjct: 63 IKKAGG--DASEIMTRMSAIGDEIKAAEVALSELQAELEAKSLSIPNLPDESVPEGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I + G + ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RA+ Q Sbjct: 121 DNVEILTWGTPRTFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRAITQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM++ HT E+GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 181 FMLNTHTLENGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + EDS Sbjct: 241 FVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPEDSMQA 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE ILK L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 301 LEELTGHAEGILKALGLPYRKIILCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K +F HTLNGSG+AVGR L+A++ENY ADGS+ IPTVLRPYM Sbjct: 361 FQARRMKARYR-ADQKKTEFVHTLNGSGLAVGRTLLAVMENYQRADGSIEIPTVLRPYMG 419 Query: 419 NLAVI 423 I Sbjct: 420 GAEYI 424 >gi|307130790|ref|YP_003882806.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Dickeya dadantii 3937] gi|306528319|gb|ADM98249.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Dickeya dadantii 3937] Length = 431 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 198/432 (45%), Positives = 271/432 (62%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIAL-KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R + + L +R+ + E + +L+E+ ++L + E+++A RNS S +IG Sbjct: 1 MLDPNLLRNELDAVAEKLLARRNFKLDVEALRTLEERRKVLQVETENLQAERNSRSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + G ++ L+ + + L E+L + E +V + ++ + IPN+P + VP G Sbjct: 61 AAKSRG--EDIEPLRRDVNELGEKLDAAKAELQQVLNDIETISLMIPNMPDDCVPPGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN + G+ R+H ++GE G + KL+GARFSV+ G +A L RAL Sbjct: 119 SENQEVMRWGEPRQFDFPVRDHVDLGELTGGLSMALGVKLTGARFSVMKGQVARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPT 231 QFM++LHT+EHGY E P LV +YGTGQ+PKF +D+F T LIPT Sbjct: 179 QFMLNLHTAEHGYEEAYVPYLVNHATLYGTGQLPKFKEDLFHTRPLEEEAESSNYALIPT 238 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV LTNL EI++ +SLP++ T P FRSEAGS GRD RG++R HQF K E+V I R Sbjct: 239 AEVPLTNLVRDEILDEESLPIKLTAHTPCFRSEAGSYGRDMRGLIRVHQFDKVEMVQIVR 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS E + S AE++L+ L L YR V LC+GD+GF ACKTYDLEVWL QN YREIS Sbjct: 299 PEDSMQALEELTSHAEKVLQLLKLPYRKVLLCSGDMGFGACKTYDLEVWLPAQNTYREIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS CG+FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY ADG + +P Sbjct: 359 SCSNCGDFQARRMLARCRSKGDKKTRLVHTLNGSGLAVGRALVAVLENYQQADGRIEVPE 418 Query: 412 VLRPYMNNLAVI 423 VLRPYMN L I Sbjct: 419 VLRPYMNGLQFI 430 >gi|303231013|ref|ZP_07317756.1| serine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302514395|gb|EFL56394.1| serine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 426 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 189/426 (44%), Positives = 271/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N E + L RH + + ++ ++ + LI+K+E+++A RNS + +I Q Sbjct: 1 MLDLKFVRENLELVKQNLDNRHTKGDLDTFVAAYDERKQLIQKVEELKALRNSVTEEISQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N D E + +++ L+ EV SL+ +PN+ VP+G + Sbjct: 61 LKR--NKENADDKIAEMKRVGDEISELDGRIREVEESLRNAELMLPNMCDASVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ R G+ + H++IGE L ++DF+RA K+SGARF+V G A LERAL Sbjct: 119 ENVEQRKWGEPRQFDFEPKAHWDIGEDLDILDFNRAVKMSGARFTVYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH + GYTE+ P +V E + GTGQ+PKFA+DM+ D + IPT+EV+LTN Sbjct: 179 FMVDLHVDKQGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVEDTEYFLIPTAEVTLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EI+ LP +T FR+EAGSAGRDTRG++RQHQF K E+V +++ EDS+ E Sbjct: 239 HSGEILSEDELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLSKPEDSWNEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEE+L+ L+L +RV++LCTGD+GF + KTYD+EVW+ QN YREISSCS +F Sbjct: 299 EKLTDNAEEVLRLLELPFRVITLCTGDIGFGSAKTYDVEVWMPAQNKYREISSCSNMTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSG+AVGR + AILEN DGSV IP VL PYM Sbjct: 359 QARRANIKFRRGPKGKPEFVHTLNGSGLAVGRTVAAILENNQQPDGSVVIPKVLVPYMGG 418 Query: 420 LAVIKK 425 + I Sbjct: 419 VEKITP 424 >gi|329930188|ref|ZP_08283801.1| serine--tRNA ligase [Paenibacillus sp. HGF5] gi|328935210|gb|EGG31691.1| serine--tRNA ligase [Paenibacillus sp. HGF5] Length = 427 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 276/428 (64%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R ++ ALK R LD + R L+++ E ++ RRN+ SA++ Sbjct: 1 MLDVKILRSEYSRVEEALKNRGKSLDLIADFPKLDARRRELLQESESLKNRRNTVSAEVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D L E + +Q+ +++E E+ +S+ +L IPN+P E VPIG S Sbjct: 61 KLKK--NRENADELILEMRQVSDQIKAMDEEVRELEASISELTLAIPNIPHESVPIGASE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ IR + + + H+EI + L ++DF+ K++G+RF+ G A LERAL Sbjct: 119 EENVEIRRWAEPKAFDFEPKAHWEIAQNLSILDFEAGAKVTGSRFTFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+DLH+ +HGY E+ P +V +++YGTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 SFMMDLHSDKHGYEEMLPPYIVNRDSLYGTGQLPKFEEDLFKISDTDYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ S+ LP + + FRSEAG+AGRDTRG++RQHQF K E+V I E SF E Sbjct: 239 YHREEILNSEDLPKYYVAYSSCFRSEAGAAGRDTRGLIRQHQFNKVEMVKIVHPETSFDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE +L+ L+L YRV++LCTGD+GF + KTYDLEVWL +YREISSCS G+ Sbjct: 299 LEKMTADAERVLQLLNLPYRVMTLCTGDMGFGSMKTYDLEVWLPESGVYREISSCSNIGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R +F HTLNGSG+AVGR + AILENY ADGSV IP VLRPYM Sbjct: 359 FQARRANIRFRPEPKSKPEFVHTLNGSGLAVGRTVAAILENYQQADGSVVIPEVLRPYMG 418 Query: 419 NLAVIKKE 426 N+++I+ + Sbjct: 419 NVSIIEPK 426 >gi|308171904|ref|YP_003918609.1| seryl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307604768|emb|CBI41139.1| seryl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|328551712|gb|AEB22204.1| seryl-tRNA synthetase [Bacillus amyloliquefaciens TA208] gi|328909972|gb|AEB61568.1| seryl-tRNA synthetase [Bacillus amyloliquefaciens LL3] Length = 425 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 190/427 (44%), Positives = 273/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R N + + L + + + LDEK R LI K+E+++ +RN S Q+ Sbjct: 1 MIDTKVLRANFQEVKAKLIPKGEDLSDFDKFEELDEKRRELIGKVEELKGKRNEVSQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D + E + E++ L++E V ++L+ ++ IPN+P + VP+G + Sbjct: 61 VLKREKK--DADHIIKEMREVGEEIKKLDEELRTVETTLETILLSIPNIPHDSVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++NI IR G+ P+ + + H++I + L ++DF+RA+K++G+RF G A LERAL Sbjct: 119 DDNIEIRKWGEAPAFSYEPKPHWDIADHLNILDFERASKVTGSRFVFYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH E+ YTEV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMLDLHVDEYHYTEVIPPYMVNRTSMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ +LP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILSDDALPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ Q+ YREISSCS Sbjct: 299 LEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+AVGR + AILENY DGSV IP VLRPYM Sbjct: 359 FQARRANIRFRREAKGKPEHVHTLNGSGLAVGRTVAAILENYQQEDGSVVIPEVLRPYMG 418 Query: 419 NLAVIKK 425 N VIK Sbjct: 419 NKEVIKP 425 >gi|327475188|gb|AEA77189.1| seryl-tRNA synthetase [Exiguobacterium sp. EPVM] Length = 427 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 274/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R + E + L R + + L+EK R LI ++E +A+RN + QI Sbjct: 1 MLDIKRLRTDFEEIKTKLAYRGEDLSALDRFPELEEKRRNLINEVEVKKAKRNEATKQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + L ET L +++ +L++E EV + L ++ IPN+P E PIG + Sbjct: 61 ELKRNKQDADGPIL--ETRRLGDEIKLLDEELREVEAELNLILLSIPNIPHESTPIGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR VG KP+ ++H+++ E L ++D +RA K++G+RF G A LERAL Sbjct: 119 DDNVTIREVGTKPTFEFELKQHWDVMEDLKIVDVERAGKVTGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D+H EHGY+EV P +V +AM GTGQ+PKF +D F +L+PT+EV +TN Sbjct: 179 NFMMDMHADEHGYSEVLPPYMVNRDAMTGTGQLPKFEEDAFKVADTNYFLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EII LP+ +T + FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ + Sbjct: 239 MHRDEIIAEDQLPITYTAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEESYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AEE+LKRL L Y+V+S+CT DLGF+A K YD+EVW+ Q +YREISSCS + Sbjct: 299 LELLTGHAEEVLKRLGLPYQVLSMCTADLGFTAAKKYDIEVWMPAQGMYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R+R + +F HTLNGSG+AVGR + AILEN+ ADGSV IP VLRPYM Sbjct: 359 FQARRAGIRFRREANAKPEFVHTLNGSGLAVGRTVAAILENFQQADGSVVIPEVLRPYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GVEKIE 424 >gi|262371908|ref|ZP_06065187.1| seryl-tRNA synthetase [Acinetobacter junii SH205] gi|262311933|gb|EEY93018.1| seryl-tRNA synthetase [Acinetobacter junii SH205] Length = 425 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 191/425 (44%), Positives = 271/425 (63%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ ++ L+ + + L K E+++A RN+ + Q+GQ Sbjct: 3 MIDPKLLRNNIEAVNAALAKRGVQLNAQEWADLEVRRKELQSKAENLQAERNAGAKQVGQ 62 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + S + +++ E E+ + L++ IPN+P E VP G + Sbjct: 63 IKKSGG--DASEIMARMSAIGDEIKAAEVALAELQTELEQKSLAIPNLPDESVPEGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 121 DNLEILKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV + + GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 181 FMLDTHTLKNGYTEAYVPYLVNADTLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPITN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 241 FVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPEHSMQA 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE IL+ L L YR + LC GD+GF A KTYDLEVW+ QN YREISSCS G+ Sbjct: 301 LEELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K ++ HTLNGSG+AVGR L+A++ENY ADGS+ IP VLRPYM Sbjct: 361 FQARRMKARYR-VDQKKIELVHTLNGSGLAVGRTLLAVMENYQRADGSIEIPEVLRPYMG 419 Query: 419 NLAVI 423 ++ I Sbjct: 420 GVSFI 424 >gi|332366431|gb|EGJ44182.1| serine--tRNA ligase [Streptococcus sanguinis SK355] Length = 425 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 202/428 (47%), Positives = 279/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + S+DE+ R L+ K+E ++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAEKLANRGVDAATLNQMKSIDEERRDLLVKVEALKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDATLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPREFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVITPK 425 >gi|313894660|ref|ZP_07828223.1| serine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313440850|gb|EFR59279.1| serine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 426 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 191/426 (44%), Positives = 270/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + + L RH E +S ++ R LI K+E+++A RNS + +I Q Sbjct: 1 MLDLKFVRENIDLVQQNLDNRHTTGDLETFVSAYDERRQLIGKVEELKALRNSVTEEISQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N D E + +++ L+ EV ++L+ +PN+ VP+G Sbjct: 61 LKR--NKENADDKIAEMKKVGDEIAELDNRIREVETNLRDAALMLPNMCDSSVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ R G+ + H+++GE+L ++DF+RA K+SGARF+V G A LERAL Sbjct: 119 ENVEQRKWGEPRQFDFEVQAHWDLGESLDILDFNRAGKMSGARFTVYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGYTE+ P +V E + GTGQ+PKFA+DM+ D + IPT+EV+LTN Sbjct: 179 FMVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVEDTEYFLIPTAEVTLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ + LP +T FR+EAGSAGRDTRG++RQHQF K E+V + + EDSF E Sbjct: 239 HGDEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AEE+L+ L+L +RV++LCTGD+GF + KTYD+EVW+ Q YREISSCS +F Sbjct: 299 ETLTDNAEEVLRLLELPFRVITLCTGDMGFGSAKTYDVEVWMPAQGKYREISSCSNMTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSG+AVGR + AILEN ADGSV IP VL PYM Sbjct: 359 QARRANIKFRRGPKGKPEFVHTLNGSGLAVGRTVAAILENCQQADGSVVIPKVLVPYMGG 418 Query: 420 LAVIKK 425 + VI Sbjct: 419 IEVITP 424 >gi|259502043|ref|ZP_05744945.1| serine-tRNA ligase [Lactobacillus antri DSM 16041] gi|259169956|gb|EEW54451.1| serine-tRNA ligase [Lactobacillus antri DSM 16041] Length = 444 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 200/431 (46%), Positives = 286/431 (66%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQNP+ L R ++ + + +L+LD+K R L+++ E ++A+RN S +IG Sbjct: 12 MLDIKKIRQNPDFYKQKLATRGVQAEEIDEVLALDQKRRDLLQQTETMKAQRNDASKKIG 71 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A G D ET L +++ L+++ L +S +PNVP + VP+ + Sbjct: 72 AAKRNG--ESADEAIKETRELGDKIKQLDEQVEANDEELHDKMSRLPNVPHDGVPVSLTE 129 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + +R VGK + H+++GE LG++DFDRA K+SG+RF G A LERA+ Sbjct: 130 DGAVELRKVGKIRDFDFAPKHHWDVGEQLGILDFDRAGKVSGSRFVYYLGLGAQLERAVY 189 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H + GYTEV P +V ++MYGTGQ PKF + ++ + LIPT+EV LTN Sbjct: 190 NFMLDEH-MKDGYTEVLPPYIVNADSMYGTGQFPKFKEGVYQVNGEDMTLIPTAEVPLTN 248 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I ++ LP+ T L P FRSEAG+AGRDTRG++R HQF K E+V T+ EDS+ E Sbjct: 249 YYRGEVIPAEELPVYVTALTPCFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPEDSWDE 308 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE ILK+L++ Y V++L T D+ F+A +T+DLE+W+ Q YRE+SSCS C + Sbjct: 309 LEKMTANAENILKKLEIPYHVITLTTSDMSFTASETHDLELWMPAQEKYREVSSCSNCLD 368 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM+++YRD N K L++ HTLNGSG+AVGR + AILENY NADGSVTIP VL PYM+ Sbjct: 369 FQARRMHTQYRDENGK-LQYVHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLVPYMH 427 Query: 419 NLAVIKKEHIL 429 + I KE+ + Sbjct: 428 GVTKITKENAV 438 >gi|194467495|ref|ZP_03073482.1| seryl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194454531|gb|EDX43428.1| seryl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 435 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 205/431 (47%), Positives = 291/431 (67%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQ P+ L R ++P+ + +++LD+K R L+++ E ++A+RN S +IG Sbjct: 1 MLDIKKIRQEPDFYKEKLATRGVKPEEIDEVIALDKKRRELLQQTETMKAQRNEASKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A G DA ET L +++ L+ E + L ++ +PNVP + VP+ + Sbjct: 61 EAKRNG--ESADAAIKETRELGDKIKELDAEVEANDAELHDKMAHLPNVPHDGVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + +R VGK + H++IGE LG++DFDRA K+SGARF G A LERA+ Sbjct: 119 DGAVELRKVGKVRDFDFEPKHHWDIGENLGILDFDRAGKVSGARFVYYLGLGAQLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H + GYTEV P +V ++MYGTGQ PKF + ++ + LIPT+EV LTN Sbjct: 179 NFMLDEH-MKEGYTEVLPPYIVNADSMYGTGQFPKFKEGVYQVNGEDMTLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I ++ LP+ T L PSFRSEAG+AGRDTRG++R HQF K E+V T+ E+S+ E Sbjct: 238 YYRGEVIPTEELPVYVTALTPSFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPENSWDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE ILK+L+L Y V++L TGD+ F+A +T+DLE+W+ QN YRE+SSCS C + Sbjct: 298 LEKMTANAENILKKLNLPYHVITLTTGDMSFTASETHDLELWMPAQNKYREVSSCSNCLD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM+++YRD N K L++ HTLNGSG+AVGR + AILENY NADGSVTIP VL PYM+ Sbjct: 358 FQARRMHTQYRDENGK-LQYVHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLVPYMH 416 Query: 419 NLAVIKKEHIL 429 + I KE+ + Sbjct: 417 GVTKITKENAV 427 >gi|149190995|ref|ZP_01869256.1| seryl-tRNA synthetase [Vibrio shilonii AK1] gi|148835129|gb|EDL52105.1| seryl-tRNA synthetase [Vibrio shilonii AK1] Length = 435 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 193/434 (44%), Positives = 266/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAEKLARRGFKLDVETIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L ++E V + L+ + +PN+P ++VP G N Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLEAKKEELTAVMAQLEDITLSVPNLPADDVPQGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ S ++H ++GE +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKSYDFEVKDHVDLGEMGDGLDFASATKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGYTE+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGKDLFHTEPLTEKASDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL I E LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNLVRDTISEEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ EDS E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM+ I Sbjct: 421 PAVLQKYMSGATHI 434 >gi|104781341|ref|YP_607839.1| seryl-tRNA synthetase [Pseudomonas entomophila L48] gi|122403636|sp|Q1IBD0|SYS_PSEE4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|95110328|emb|CAK15035.1| seryl-tRNA synthetase ; also charges selenocystein tRNA with serine [Pseudomonas entomophila L48] Length = 426 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 196/428 (45%), Positives = 274/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKQLRTELQVVADRLATRGFSLDVARIESLEERRKSVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L + + +L + E + + L ++ IPN+P VP+G S Sbjct: 61 AKAKG--EDIAPLMADVERMANELAEGKTELDGIQAELDAILLTIPNLPDASVPVGASEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + ++H +GE +DF+ A KLSGARF+VL G +A L RAL Q Sbjct: 119 ENVEVRRWGTPATFDFEIKDHVALGEISRGLDFEAAAKLSGARFAVLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LHT EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHTGEHGYEEHYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADFYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL + EII++K LP++ P FRSEAG++GRDTRGM+RQHQF K E+V + S Sbjct: 239 TNLVAGEIIDAKQLPIKLVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSKSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV++LCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAERVLQLLELPYRVLALCTGDMGFGAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVIK 424 M + VI+ Sbjct: 419 MGGVEVIR 426 >gi|113461218|ref|YP_719287.1| seryl-tRNA synthetase [Haemophilus somnus 129PT] gi|123132161|sp|Q0I471|SYS_HAES1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|112823261|gb|ABI25350.1| seryl-tRNA synthetase [Haemophilus somnus 129PT] Length = 429 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 264/431 (61%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK +R L+E+ + L K E ++A RNS S IG Sbjct: 1 MIDPTLLRNNLSEIAEKLKVRRGFILDVNKFSQLEEQRKTLQIKTETLQAERNSRSKTIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + +L +++E V + +++L IPN+P +EVP+G Sbjct: 61 AAKARG--EDISTLLAEVDHMGAELNTVKEELANVLTEIEQLALTIPNIPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N + G ++H +GE LG +DF KLSGARF+V+ G +A + RAL Sbjct: 119 SDNKEVFRWGTPKKFDFEVKDHVALGEILGGLDFAAGVKLSGARFAVIKGQIARMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEV 234 QFM+DLHT +HGYTE P LV +YGTGQ+PKF +++F LIPT+EV Sbjct: 179 QFMLDLHTEQHGYTEAYVPYLVNHATLYGTGQLPKFGEELFHIKPLENEQTYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K ELV I E Sbjct: 239 PVTNLVRDEIIDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVEPEK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTNQAEKVLQLLNLPYRKVLLCTGDMGFGATKTYDLEVWIPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R R K + HTLNGSG+AVGR L+AILENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCRAKGDKKTRLVHTLNGSGLAVGRTLVAILENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYMN + +I K Sbjct: 419 PYMNGIEIIGK 429 >gi|91775482|ref|YP_545238.1| seryl-tRNA synthetase [Methylobacillus flagellatus KT] gi|123078899|sp|Q1H290|SYS_METFK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|91709469|gb|ABE49397.1| seryl-tRNA synthetase [Methylobacillus flagellatus KT] Length = 432 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 200/436 (45%), Positives = 275/436 (63%), Gaps = 13/436 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + +++ L R ++L+ + + + + +D++A+RN+ S QIG Sbjct: 1 MLDIQQLRNDLDNVVARLSSRGFAFDINAFIALENERKTVQTRTQDLQAKRNATSKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G V ++ E + L QL E+ + + L++L+ +PN+P E VP+G S Sbjct: 61 AKSRG--EDVASIMAEVAGLGAQLKEGEERLAAIQAELQQLLLSVPNLPHESVPVGKSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG ++H +IG LG +DFD KL+GARF+++ G +A L RAL Q Sbjct: 119 DNVEVRRVGTPRRFDFDVKDHTDIGTPLG-LDFDTGAKLAGARFTLMRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---------CTTDGRWLIPT 231 FM+D T +HGYTE P +V +++ GTGQ+PKF D+F + + +LIPT Sbjct: 178 FMLDTQTEQHGYTECYTPYIVNADSLRGTGQLPKFEADLFAAQKGGQEGESNEAFYLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 SEV+LTN EI+ SLP++ T P FRSEAGS GRDTRGM+RQHQF K E+V IT Sbjct: 238 SEVTLTNTVRDEIVPLDSLPIKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQITH 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E S+ E M+ AE +L+ L L YRVV LCTGD+GF A KTYDLEVWL QN YREIS Sbjct: 298 PERSYDALEEMVGHAEHVLQALGLPYRVVLLCTGDMGFGAAKTYDLEVWLPAQNTYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S S C FQ+RR+ +R+R+ N K + HTLNGSG+AVGR L+A+LEN ADGSV +P Sbjct: 358 SVSNCEAFQARRLQARFRNENGK-PELLHTLNGSGLAVGRTLVAVLENNQQADGSVVVPE 416 Query: 412 VLRPYMNNLAVIKKEH 427 VLRPYM L VI + Sbjct: 417 VLRPYMGGLTVISAQQ 432 >gi|238792410|ref|ZP_04636044.1| Seryl-tRNA synthetase [Yersinia intermedia ATCC 29909] gi|238728336|gb|EEQ19856.1| Seryl-tRNA synthetase [Yersinia intermedia ATCC 29909] Length = 430 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 196/431 (45%), Positives = 265/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + E + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGFKLDVEMLRQQEERRKVLQVETESLQAERNSRSKLIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ L IPN+P + VP+G Sbjct: 61 AKARG--EDIEPLRLEVNVLGERLDAAKAELDKLQNEIRDLALSIPNLPDDSVPMGKDEK 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ R+H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNLEVSRWGEPRKYDFEVRDHVSLGEMTGGLDFAAAVKLTGARFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E +LPL+ T P FRSEAGS GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPLTNLVRDEILEEDTLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ LDL YR V LCTGD+GF + KTYDLEVWL Q+ YREISS Sbjct: 299 EDSMAALEELTGHAEKVLQLLDLPYRKVLLCTGDMGFGSSKTYDLEVWLPAQDTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R R+ + + HTLNGSG+AVGR L+A+LENY ADG + +P V Sbjct: 359 CSNMWDFQARRMQARCRNKIDRKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMGGLDFI 429 >gi|119945378|ref|YP_943058.1| seryl-tRNA synthetase [Psychromonas ingrahamii 37] gi|166223274|sp|A1SVE4|SYS_PSYIN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|119863982|gb|ABM03459.1| seryl-tRNA synthetase [Psychromonas ingrahamii 37] Length = 428 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 197/429 (45%), Positives = 264/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R + E + L R E + L+EK +IL E ++A RNS S ++GQ Sbjct: 1 MLDPKFLRNDIEQTALRLASRGYTLDVELLNQLEEKRKILQITTETLQAERNSRSKEVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L+ E L E+L +++ + +K L +PN+P E P+G + Sbjct: 61 AAKRG--EDITPLRTEMGLLGERLDSAKEDFALLAEQIKSLAYSMPNLPHESAPLGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ I G+ ++H ++GEAL +DF A K+SG+RF V+ G +A L RAL Q Sbjct: 119 ENVEILKWGEPKKFDFEVKDHVDLGEALDGLDFKSAVKISGSRFIVMRGKIAKLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 +M+DLHT HGYTE+ P LV +++YGTGQ+PKF DD+F T LIPT+EV Sbjct: 179 YMLDLHTDHHGYTEMYVPYLVNADSLYGTGQLPKFGDDLFNTKPATEEGIGMSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTN+ I + LPL+ T P FRSEAGS GRDTRG++RQHQF K E+V E Sbjct: 239 PLTNMSRDMIYDESDLPLKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQFVHPEK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 SF E + AE++LK L L YR V LCTGD+GF A KTYDLEVWL Q+ YREISSCS Sbjct: 299 SFEALEELTGHAEQVLKNLQLPYRKVVLCTGDMGFGATKTYDLEVWLPAQDQYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 G+FQ+RR+ +R+R +K + HTLNGSG+AVGR L+A+LENY DGS+ IP VL+ Sbjct: 359 NIGDFQARRLQARFRPTGAKKPELLHTLNGSGLAVGRTLVAVLENYQLEDGSIEIPQVLQ 418 Query: 415 PYMNNLAVI 423 YM L I Sbjct: 419 QYMGGLTHI 427 >gi|317126756|ref|YP_004093038.1| seryl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315471704|gb|ADU28307.1| seryl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 425 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 191/427 (44%), Positives = 277/427 (64%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R + + + L+ R+ + + + LDE R LI+++ED++ RRN+ S +I Sbjct: 1 MLDVKLLRSSFDEVKAKLEHRNEDISELDRFGELDETRRQLIQEVEDLKNRRNTVSQEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q E + D L E + ++ L+ + EV S+L +++ IPN+P E PIG + Sbjct: 61 QLKREKKNA--DDLIKEMKDVSTKVKELDDKLREVDSTLSQILLSIPNIPHESAPIGATE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN +R G+ P+ + H++I LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DENEEVRKWGEVPAFDFEHQAHWDIATNLGILDFERAAKVTGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH EHGY E+ P +V ++M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMMDLHQDEHGYEEILPPYMVNRDSMTGTGQLPKFEEDAFKIREEEYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI++++ LP +T + FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ + Sbjct: 239 LHRDEIMQAEELPKAYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEESYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ S AE++L+ L L YRV+++CTGDLGF+A K YD+EVW+ N YREISSCS Sbjct: 299 LEQLTSQAEKVLQLLKLPYRVLNMCTGDLGFTAAKKYDIEVWIPSNNAYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ +F HTLNGSG+A+GR + AILENY DGSV IP VL+PYM Sbjct: 359 FQARRANIRFKRDIKGKAEFVHTLNGSGLAIGRTVAAILENYQQPDGSVKIPDVLKPYMG 418 Query: 419 NLAVIKK 425 VI K Sbjct: 419 GKEVISK 425 >gi|270293326|ref|ZP_06199535.1| serine--tRNA ligase [Streptococcus sp. M143] gi|270278175|gb|EFA24023.1| serine--tRNA ligase [Streptococcus sp. M143] Length = 424 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 279/427 (65%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E+++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDATILNEMKEIDAKRRDILVKVENLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E ++ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELADIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY NADGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|225851091|ref|YP_002731325.1| seryl-tRNA synthetase [Persephonella marina EX-H1] gi|225645430|gb|ACO03616.1| seryl-tRNA synthetase [Persephonella marina EX-H1] Length = 419 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 203/420 (48%), Positives = 282/420 (67%), Gaps = 4/420 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IR NPE + L KR E + IL +DE+ R +IK++ED++A +N S +I Sbjct: 1 MLDIKLIRSNPEFVKERLSKRDPAYEKMIDEILDVDEERRRIIKEVEDLKAEKNRLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G EG + +K+E +++ LE++ ++ L+ +PN+P E VP+G Sbjct: 61 GLLFREGKKEEAEKVKDEVQAKNKKIERLERDLKDIEKRFNYLLLTVPNIPHETVPVGED 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ IR G+ H++IGE LG++DF+R KLSG+RF+V+ A LERAL Sbjct: 121 EEDNVEIRRWGEPRKFDFEPLPHWDIGEKLGILDFERGAKLSGSRFTVMYSEAARLERAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 FM+DLHT EHGYTEV P+LVR E + GTGQ+PKF +D++ + +L+PT+EVSLT Sbjct: 181 INFMLDLHTKEHGYTEVWTPVLVRSEILVGTGQLPKFEEDLYRISEEDLYLLPTAEVSLT 240 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL++ EI++ + LP +T P FR EAGS G+D RG+LRQHQF K ELV I + EDS+ Sbjct: 241 NLHAGEILKEEELPKYYTAYTPCFRREAGSHGKDVRGILRQHQFDKVELVKIVKPEDSYE 300 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+++ AE++L+ L+L YRVV LCTGDLGFSA KTYD+EVW+ Q YREISSCS Sbjct: 301 ELEKLVREAEKVLQLLELPYRVVELCTGDLGFSAAKTYDIEVWIPSQKRYREISSCSNTE 360 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++D + K+ +F HTLNGSG+AVGR L+AI+ENY DGS IP +L+ YM Sbjct: 361 DFQARRAKIRFKDKDGKN-RFVHTLNGSGLAVGRTLLAIMENYQREDGSFDIPEILKKYM 419 >gi|312865429|ref|ZP_07725656.1| serine--tRNA ligase [Streptococcus downei F0415] gi|311098947|gb|EFQ57164.1| serine--tRNA ligase [Streptococcus downei F0415] Length = 425 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 277/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN + + L R ++ + + + LD K R L+ K E+++A RN S I Sbjct: 1 MLDLKRIRQNFDEVAKNLANRGVKAETLDQLKELDVKRRDLLVKSEELKAHRNVASTAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + + ++ L+ + EV L ++ +PN+P +VP+G Sbjct: 61 QAKR--NKEDASDQIAQMQKVSAEIKSLDSQLAEVDQKLNDIVVTLPNMPHADVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPRDFDFEAKAHWDLGEDLDILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K +P+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 238 YYRGEILDGKEMPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPETSYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYD+EVW+ QN YREISSCS C + Sbjct: 298 LEKMTANAENILQKLNLPYRVITLCTGDMGFSAAKTYDVEVWIPAQNTYREISSCSNCED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 + VIK + Sbjct: 418 GVEVIKAD 425 >gi|146321639|ref|YP_001201350.1| hypothetical protein SSU98_1792 [Streptococcus suis 98HAH33] gi|145692445|gb|ABP92950.1| SerS [Streptococcus suis 98HAH33] gi|292559062|gb|ADE32063.1| SerS [Streptococcus suis GZ1] Length = 467 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 270/427 (63%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + I LD K R ++ +E+++A RN+ SA+I Sbjct: 44 MLDIKRIRTDFDGVAAKLATRGVAAETLANIKELDAKRREILVTVEELKAERNTVSAEIA 103 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L + L+ + E+ L +I+ +PN P + VP+G Sbjct: 104 QAKR--NKENADDKIAAMQKLSADVKNLDAQLLEIDEELNAIITVLPNTPHDSVPVGADE 161 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 162 EENVEVRRWGTPREFTFEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 221 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H +E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 222 NFMLDEHIAE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 280 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EI+E K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V E S+ E Sbjct: 281 YYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDE 340 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 341 LEKMTANAENILQKLGLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNAYREISSCSNTED 400 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 401 FQARRAQIRYRDAADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 460 Query: 419 NLAVIKK 425 + VIK Sbjct: 461 GVEVIKP 467 >gi|148543336|ref|YP_001270706.1| seryl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|184152746|ref|YP_001841087.1| seryl-tRNA synthetase [Lactobacillus reuteri JCM 1112] gi|227364408|ref|ZP_03848498.1| seryl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|325683608|ref|ZP_08163124.1| serine--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|166987314|sp|A5VHP5|SYS_LACRD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|229890222|sp|B2G575|SYS_LACRJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|148530370|gb|ABQ82369.1| seryl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|183224090|dbj|BAG24607.1| seryl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227070501|gb|EEI08834.1| seryl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|324977958|gb|EGC14909.1| serine--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 435 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 205/431 (47%), Positives = 291/431 (67%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQ P+ L R ++P+ + +++LD+K R L+++ E ++A+RN S +IG Sbjct: 1 MLDIKKIRQEPDFYKEKLATRGVKPEEIDEVIALDKKRRELLQQTETMKAQRNEASKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A G DA ET L +++ L+ E + L ++ +PNVP + VP+ + Sbjct: 61 EAKRNG--ESADAAIKETRELGDKIKELDTEVEANDAELHDKMAHLPNVPHDGVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + +R VGK + H++IGE LG++DFDRA K+SGARF G A LERA+ Sbjct: 119 DGAVELRKVGKVRDFDFEPKHHWDIGENLGILDFDRAGKVSGARFVYYLGLGAQLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H + GYTEV P +V ++MYGTGQ PKF + ++ + LIPT+EV LTN Sbjct: 179 NFMLDEH-MKEGYTEVLPPYIVNADSMYGTGQFPKFKEGVYQVNGEDMTLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I ++ LP+ T L PSFRSEAG+AGRDTRG++R HQF K E+V T+ E+S+ E Sbjct: 238 YYRGEVIPTEELPVYVTALTPSFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPENSWDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE ILK+L+L Y V++L TGD+ F+A +T+DLE+W+ QN YRE+SSCS C + Sbjct: 298 LEKMTANAENILKKLNLPYHVITLTTGDMSFTASETHDLELWMPAQNKYREVSSCSNCLD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM+++YRD N K L++ HTLNGSG+AVGR + AILENY NADGSVTIP VL PYM+ Sbjct: 358 FQARRMHTQYRDENGK-LQYVHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLVPYMH 416 Query: 419 NLAVIKKEHIL 429 + I KE+ + Sbjct: 417 GVTKITKENAV 427 >gi|307704266|ref|ZP_07641185.1| seryl-tRNA synthetase [Streptococcus mitis SK597] gi|307622177|gb|EFO01195.1| seryl-tRNA synthetase [Streptococcus mitis SK597] Length = 424 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 276/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDATVLNEMKEIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E ++ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELADIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|289523031|ref|ZP_06439885.1| serine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503574|gb|EFD24738.1| serine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 430 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 216/424 (50%), Positives = 287/424 (67%), Gaps = 3/424 (0%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LDI+WIR+NP+ L+ R E + +L LD R + ++E ++A+RN S ++ + Sbjct: 6 LDIKWIRENPDEARRMLQNRGYEYPLDELLDLDSLRRQKLIEVEGLKAKRNEGSKEVAKL 65 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 ++G L E + E + +L+KE ++ +L+ L+ IPN P E VP+G S + Sbjct: 66 KSKG--EDPSNLMEEIRNINEDIKVLDKEVQDIEENLRDLLLQIPNKPHESVPVGKSEED 123 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 N+++RSVG+ P + H+E+GE +GLMDF+ KL+G+RF+VL G+ A L RAL F Sbjct: 124 NVVVRSVGELPKFDFEPKPHWELGEKMGLMDFEAGIKLAGSRFTVLRGNGARLARALINF 183 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSLTNLY 240 M+DLHT EHGY E P +V + M GTGQ+PKFA+D+ C +D WLIPT+EV LTN++ Sbjct: 184 MLDLHTREHGYLEFEPPFIVNSKTMTGTGQLPKFANDLYHCESDDLWLIPTAEVPLTNMH 243 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ LPL +T P FR EAGS GRD RGMLRQHQF K ELV I E S+ E E Sbjct: 244 AEEILDEDVLPLYYTAYTPCFRREAGSHGRDVRGMLRQHQFDKVELVKICTPETSYDELE 303 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 ++ AEE+LKRL L YRVV LCTGD+GF+A KTYDLEVWL QN YREISSCS C +FQ Sbjct: 304 KLTQNAEEVLKRLGLPYRVVCLCTGDMGFAASKTYDLEVWLPSQNTYREISSCSNCEDFQ 363 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RY+ +K +F HTLNGSG+AVGRCLIAI+ENY ADGS+ IP L PYM L Sbjct: 364 ARRMNTRYKPRGAKGTRFVHTLNGSGIAVGRCLIAIMENYQQADGSIKIPDALVPYMKGL 423 Query: 421 AVIK 424 I+ Sbjct: 424 TEIR 427 >gi|187923045|ref|YP_001894687.1| seryl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|238689594|sp|B2T1A6|SYS_BURPP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|187714239|gb|ACD15463.1| seryl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 431 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 274/431 (63%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFAALEAERRETQTRTEEMQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + +++ + ++ L +L+ +PN+P E VP+G Sbjct: 61 MKGKG--EDTSAVMAEVGGIGDEMKASAAKLDDIQKRLSELLQGVPNLPHESVPMGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G ++H ++G LG +DF+ KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPRQFDFEVKDHVDVGTPLG-LDFETGAKLSGARFTMLRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTEV P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQQHGYTEVYTPYIVNPEILYGTGQLPKFADDMFRVEKGGDENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E+ +LP++ T +P FRSEAGS GRDTRG++RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSILEADALPIKLTAHSPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSC Sbjct: 298 TSYAALEEMVGHAETILQKLELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +RYR+ K + HTLNGSG+AVGR L+A+LEN+ NADGSVT+P L Sbjct: 358 SNTESFQARRMQARYRNAQGK-PELVHTLNGSGLAVGRTLVAVLENFQNADGSVTVPAAL 416 Query: 414 RPYMNNLAVIK 424 RPY+ + ++ Sbjct: 417 RPYLGGIERLE 427 >gi|227529785|ref|ZP_03959834.1| seryl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] gi|227350269|gb|EEJ40560.1| seryl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] Length = 431 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 282/431 (65%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR++PE L R ++ + + ++ LD+K R L++K E ++A+RN S +IG Sbjct: 1 MLDIKKIRKDPEFFKQKLATRGVKAEEIDEVIELDQKRRDLLQKTEALKAQRNDASKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A G D ET L +Q+ L+++ +S +PN+P + VP+ + Sbjct: 61 EAKRNG--ESADDAIKETRELGDQIKELDEQVEANDEVFHDKMSRLPNIPHDGVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +R VGK + H+++GE LG++DFDRA K+SGARF G A LERA+ Sbjct: 119 EGSVELRKVGKIRDFDFEPKHHWDVGENLGILDFDRARKVSGARFVYYLGLGAQLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H + GYTEV P +V +MYGTGQ PKF ++ + LIPT+EV LTN Sbjct: 179 NFMLDEH-MKDGYTEVLPPYIVNAASMYGTGQFPKFKKGVYQVNGEDMTLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++I ++ LP+ T L P FRSEAG+AGRDTRG++R HQF K E+V T+ EDS+ E Sbjct: 238 YYRGDVIPAEELPVYVTALTPCFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPEDSWDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE ILK+L L Y V++L T D+ F+A +T+DLE+W+ QN YRE+SSCS C + Sbjct: 298 LEKMTANAENILKKLGLPYHVITLTTSDMSFTASETHDLELWMPAQNKYREVSSCSNCLD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM+++YRD N K L++ HTLNGSG+AVGR + AILENY N DGSVTIP VL PYM+ Sbjct: 358 FQARRMHTQYRDENGK-LQYVHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLVPYMH 416 Query: 419 NLAVIKKEHIL 429 + I KE+ + Sbjct: 417 GVTKITKENAV 427 >gi|251789953|ref|YP_003004674.1| seryl-tRNA synthetase [Dickeya zeae Ech1591] gi|247538574|gb|ACT07195.1| seryl-tRNA synthetase [Dickeya zeae Ech1591] Length = 431 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 194/432 (44%), Positives = 267/432 (61%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIAL-KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R + + L +R+ + E + +L+E+ ++L + E ++A RNS S +IG Sbjct: 1 MLDPNLLRNELDAVAEKLLARRNFKLDVEALRNLEERRKVLQVETESLQAERNSRSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + G ++ L++ + L E+L + E +V + ++ + IPN+P + VP+G Sbjct: 61 AAKSRG--EDIEPLRSAVNELGEKLDAAKAELQQVQNDIETIALTIPNMPDDCVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN + G+ R+H ++GE G + KL+GARFSV+ G +A L RAL Sbjct: 119 TENQEVMRWGEPRQFDFPVRDHVDLGELTGGLSMALGVKLTGARFSVMKGQVARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPT 231 QFM+DLHT EHGY E P LV +YGTGQ+PKF +D+F T LIPT Sbjct: 179 QFMLDLHTGEHGYQEAYVPYLVNHNTLYGTGQLPKFGEDLFHTKPLSEESETSNYALIPT 238 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV LTNL EI++ +LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 AEVPLTNLVRDEILDEDALPIKLTAHTPCFRSEAGSYGRDTRGLIRVHQFDKVEMVQIVR 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E+S E + AE++L+ L L YR V LC+GD+GF +CKTYDLEVWL QN YREIS Sbjct: 299 PEESMQALEELTGHAEKVLQLLKLPYRKVLLCSGDMGFGSCKTYDLEVWLPAQNTYREIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A+LENY ADG + +P Sbjct: 359 SCSNMWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRALVAVLENYQQADGRIEVPE 418 Query: 412 VLRPYMNNLAVI 423 VLRPYMN L I Sbjct: 419 VLRPYMNGLQFI 430 >gi|237738388|ref|ZP_04568869.1| seryl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229420268|gb|EEO35315.1| seryl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 423 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 274/425 (64%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML++++IR+N E ++ LK R+ + LD++ R ++ ++E ++ +RNS SA+I + Sbjct: 1 MLELKFIRENREKVEEMLKNRNSNLTLDEFFQLDDERREILGEVEALKQKRNSESAEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + L E + Q+ L+ + EV L + IPN+ E P+G N Sbjct: 61 LKKEKQDATA--LIEEMGKVSAQIKELDTKLAEVEEKLTYIQMTIPNMYQEGTPVGEDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G + H++IGE LG++DF+R KL G+RF + G A +ERAL Sbjct: 119 SNVEIRRWGTPREFTFEPKAHWDIGEDLGILDFERGAKLGGSRFVLYRGLGARVERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGYTE P +V+ E GTGQ+PKF DDM+ TTD +LI TSE+++TN++ Sbjct: 179 FMLDLHTLEHGYTEHITPFMVKREICEGTGQLPKFEDDMYRTTDDMFLISTSEITMTNIH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI++ K LP +T +P FR EAGS G+D +G++R HQF K E+V IT +E S+ E E Sbjct: 239 RKEILDEKELPKYYTAYSPCFRREAGSYGKDVKGIIRLHQFNKVEMVKITNQESSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AEE+L+RL+L YRV+ LCTGDLGF A KTYD+EVWL Q YREISSCS C FQ Sbjct: 299 KMVNNAEEVLQRLELPYRVIQLCTGDLGFGAAKTYDIEVWLPSQKKYREISSCSNCEGFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR S ++ HTLNGSG+AVGR L+AI+ENY DGS IP L PYM + Sbjct: 359 ARRMGLKYRPNGSSKSEYCHTLNGSGLAVGRTLVAIMENYQQEDGSFLIPKALVPYMGGI 418 Query: 421 AVIKK 425 V+KK Sbjct: 419 EVVKK 423 >gi|319939766|ref|ZP_08014123.1| seryl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] gi|319811104|gb|EFW07415.1| seryl-tRNA synthetase [Streptococcus anginosus 1_2_62CV] Length = 425 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 276/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + + D K R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDTIAQKLATRGVDAATLDEMKEFDSKRRKLLVKVENLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ ++L + + +PN+P + VP+G Sbjct: 61 QAKR--NKDNADDKIAAMQKLSAEIKALDAELAEIDATLTEFTTTLPNIPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPRVFDFDVKAHWDLGENLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-QKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFEVSDTNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 238 YYRGEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEHSYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLR YM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRSYMG 417 Query: 419 NLAVIKKE 426 + VI + Sbjct: 418 GVKVIAPK 425 >gi|170691961|ref|ZP_02883125.1| seryl-tRNA synthetase [Burkholderia graminis C4D1M] gi|170143245|gb|EDT11409.1| seryl-tRNA synthetase [Burkholderia graminis C4D1M] Length = 431 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 273/431 (63%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYSLDVAAFTALEAERRDTQTRTEEMQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + ++ L L+ +PN+P E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKASAAKLDDIQKRLSDLLLGVPNLPHESVPVGRDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++G LG +DF+ KLSGARF++L G +A L RAL Q Sbjct: 119 DNVEVRRWGTPRQFDFEVKDHVDVGAPLG-LDFETGAKLSGARFTMLRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE+ P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQQHGYTEIYTPYIVNPEILYGTGQLPKFADDMFRVEKGGGENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSIVEGNALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVWL QN YREISSC Sbjct: 298 TSYDALEQMVGHAETILQKLELPYRVITLCTGDMGFSATKTYDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +RYR+ K + HTLNGSG+AVGR L+A+LEN+ NADGSVT+P L Sbjct: 358 SNTESFQARRMQARYRNAQGK-PELVHTLNGSGLAVGRTLVAVLENFQNADGSVTVPAAL 416 Query: 414 RPYMNNLAVIK 424 RPY+ + ++ Sbjct: 417 RPYLGGVERLE 427 >gi|307710546|ref|ZP_07646982.1| seryl-tRNA synthetase [Streptococcus mitis SK564] gi|307618699|gb|EFN97839.1| seryl-tRNA synthetase [Streptococcus mitis SK564] Length = 424 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 277/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDAAVLNEMKEIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKSLDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY NADGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNADGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|164686346|ref|ZP_02210376.1| hypothetical protein CLOBAR_02784 [Clostridium bartlettii DSM 16795] gi|164601948|gb|EDQ95413.1| hypothetical protein CLOBAR_02784 [Clostridium bartlettii DSM 16795] Length = 424 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 190/427 (44%), Positives = 275/427 (64%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + + A+ +R E + +++LD++ R L+K++E ++ N S +I Sbjct: 1 MLDIKRIRENLDDIKKAMDRRGEKEFDLDAVIALDDERRELLKEVEVMKGEMNIESKKIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q I EG D K L +++ + +++ +V L+ + IPNVP E+VP G + Sbjct: 61 QLIKEGKDVTAD--KARLKELSDKIKVEDEKVKKVQEELRYRLLRIPNVPNEKVPQGETD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +NI R G+ + H++IG LG++DF+RA K++G+RF++ A LER+L Sbjct: 119 ADNIEERKWGEPRKFDFDFKAHWDIGTDLGILDFERAAKITGSRFTLYKDKGARLERSLY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 F +D +T +GYTE P + + GTGQ+PKF +DMF +G +LIPT+EV LTN+ Sbjct: 179 NFFLDTNTGVNGYTEFIPPFMANANSFLGTGQLPKFEEDMFKVDNGYYLIPTAEVPLTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +++EI+ +LPL +T P FRSEAGSAGRDTRG++RQHQF K E+V I E+S+ E Sbjct: 239 HANEILPYDALPLNYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKICAPEESYNEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AE +L++L L YRVV +CTGDLGF+A YDLEVW+ N Y EISSCS C +F Sbjct: 299 EKLTANAEYLLQQLGLPYRVVRICTGDLGFTAAFKYDLEVWMPSYNRYVEISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R++ ++ HTLNGSG+AVGR L AILENY DGSV +P VLRPYM Sbjct: 359 QARRAGIRFKRSKDSKAEYCHTLNGSGLAVGRALAAILENYQQEDGSVVVPEVLRPYM-G 417 Query: 420 LAVIKKE 426 + VI K+ Sbjct: 418 VDVITKK 424 >gi|253752458|ref|YP_003025599.1| seryl-tRNA synthetase [Streptococcus suis SC84] gi|253754284|ref|YP_003027425.1| seryl-tRNA synthetase [Streptococcus suis P1/7] gi|56684577|gb|AAW21989.1| SerS [Streptococcus suis] gi|251816747|emb|CAZ52389.1| seryl-tRNA synthetase [Streptococcus suis SC84] gi|251820530|emb|CAR47285.1| seryl-tRNA synthetase [Streptococcus suis P1/7] gi|319758862|gb|ADV70804.1| hypothetical protein SSUJS14_1746 [Streptococcus suis JS14] Length = 424 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 270/427 (63%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + I LD K R ++ +E+++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDGVAAKLATRGVAAETLANIKELDAKRREILVTVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L + L+ + E+ L +I+ +PN P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSADVKNLDAQLLEIDEELNAIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EENVEVRRWGTPREFTFEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H +E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIAE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EI+E K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V E S+ E Sbjct: 238 YYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNAYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDAADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 + VIK Sbjct: 418 GVEVIKP 424 >gi|170289239|ref|YP_001739477.1| seryl-tRNA synthetase [Thermotoga sp. RQ2] gi|238688860|sp|B1LBU6|SYS_THESQ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|170176742|gb|ACB09794.1| seryl-tRNA synthetase [Thermotoga sp. RQ2] Length = 425 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 207/426 (48%), Positives = 282/426 (66%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ IRQNP+ + AL+KR +P + IL +D R I K ++R+RRN S + Sbjct: 1 MIDIKLIRQNPDFVKEALRKRGEDPAVIDEILKIDADWRATITKTNELRSRRNEISKNVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG + +AL E L E++ LE++E E+ L L+ +PN+P E VP+G Sbjct: 61 RLKKEGKNAEAEALIEEGKRLGEEIKALEEKEKELQEKLNYLLLMVPNIPHESVPVGEDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+ H+++G A GLMDF RA+KLSG+RF+V+ G LA LERAL Sbjct: 121 SQNVEVRRWGEPREFDFTPLAHWDLGPAWGLMDFSRASKLSGSRFTVMYGKLARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTN 238 FM+D+HT EHGYTEV P LV+ E + TGQ+PKF ++++ D +LIPT+EV L Sbjct: 181 NFMLDVHTKEHGYTEVWVPHLVKRETITITGQLPKFEEELYLAERDDLFLIPTAEVPLAA 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+S EI+E K LP ++ P +R EAGS G+D RGM+RQHQF K ELV +T + SF + Sbjct: 241 LHSGEILEEKELPKKYVAYTPCYRREAGSYGKDVRGMIRQHQFDKVELVWVTTPKRSFED 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+++ AE IL++L+L YRVVSLCTGDLGF++ KTYD+EVWL N Y+EISSCS + Sbjct: 301 LEQLVKDAETILQKLELPYRVVSLCTGDLGFTSAKTYDIEVWLPSYNAYKEISSCSNVTD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR + L++ HTLNGSG+AVGR L+AILENY DGSV +P VL PY Sbjct: 361 FQARRGNMRYRRRSDGKLEYVHTLNGSGIAVGRALVAILENYQQPDGSVRVPEVLVPYT- 419 Query: 419 NLAVIK 424 VI Sbjct: 420 GFEVIP 425 >gi|288941340|ref|YP_003443580.1| seryl-tRNA synthetase [Allochromatium vinosum DSM 180] gi|288896712|gb|ADC62548.1| seryl-tRNA synthetase [Allochromatium vinosum DSM 180] Length = 424 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 268/425 (63%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L +R L + I SL+ + + L ++++++ RN+ S IG+ Sbjct: 1 MLDPRSLRTELDQVAEQLARRGLVLDTARIESLETERKALQIQVQELQNTRNTRSKSIGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E + L +QL E + L + +PN+P EVP G + Sbjct: 61 AKAAG--EDIAPLLAEVADLGDQLKAAESRLSAIQDELTDISLSLPNLPAAEVPDGRDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N R G P+ ++H ++G G MDFD A K++G+RF L+G +A L RAL Q Sbjct: 119 DNREERRWGTPPAFDFDPKDHVDLGARNGWMDFDLAAKVTGSRFVTLSGPMARLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D+HT EHGYTE P LV +++ GTGQ+PKF D+F +LIPT+EV +TN Sbjct: 179 FMLDVHTGEHGYTETYVPYLVNADSLRGTGQLPKFEADLFKVPGERDFYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L I+E+ SLP ++ P FRSEAGS G+DTRGM+RQHQF K ELV I R ED Sbjct: 239 LARDLILEADSLPRKWVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQIVRPEDGAQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE IL+RL L YRVV+LCTGDLGFSA KTYDLEVWL GQ YREISSCS G+ Sbjct: 299 LEALTGHAESILQRLGLAYRVVTLCTGDLGFSARKTYDLEVWLPGQGAYREISSCSHFGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGSV IP VLRPYM Sbjct: 359 FQARRLQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSVVIPEVLRPYMG 418 Query: 419 NLAVI 423 + + Sbjct: 419 GIERL 423 >gi|300311235|ref|YP_003775327.1| seryl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|124483334|emb|CAM32540.1| Seryl-tRNA synthetase [Herbaspirillum seropedicae] gi|300074020|gb|ADJ63419.1| seryl-tRNA synthetase [Herbaspirillum seropedicae SmR1] Length = 433 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 193/435 (44%), Positives = 266/435 (61%), Gaps = 14/435 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DIQ +R++ E++ L R +L+ + + + + E+++ +RNS S QIG Sbjct: 1 MIDIQLLRKDIENVAARLAARKFVLDVAGFNALEAERKQIQTRTEELQGKRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + + ++L EV + + +PN+P E VP+G + Sbjct: 61 LK--GKCEDASAVMAEVNGIGDELKASATRLEEVQQQMNLFLQAVPNLPHESVPVGNDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R VG ++H ++G ALG +DFD ATKL+G+RF+VL G +A L RAL Q Sbjct: 119 GNVELRKVGTPRQFDFEIKDHVDVGAALG-LDFDTATKLTGSRFAVLKGGIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC----------TTDGRWLIP 230 FM++ HT EHGYTE P +V +++ GTGQ+PKF D+F +LIP Sbjct: 178 FMLNTHTMEHGYTECYTPYIVNADSLRGTGQLPKFEADLFAAKKGGQEGEAENAALYLIP 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV LTN EI+ +LP++FT +P FRSEAGS GRDTRGM+RQHQF K E+V I Sbjct: 238 TAEVPLTNFVRDEIVAGDALPMKFTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIV 297 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E S+ + ML AE ILK+L L YRV++LCTGD+GF A KTYD+EVWL Q YREI Sbjct: 298 HPEQSYDALDEMLGHAETILKKLGLPYRVITLCTGDMGFGAAKTYDIEVWLPAQKTYREI 357 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SS S C FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY ADGSV IP Sbjct: 358 SSVSNCEAFQARRMQARFRNAQGK-PELLHTLNGSGLAVGRTLVAVLENYQQADGSVDIP 416 Query: 411 TVLRPYMNNLAVIKK 425 L+PYM + + Sbjct: 417 EALQPYMGGVTRLVP 431 >gi|52425505|ref|YP_088642.1| seryl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E] gi|67461718|sp|Q65SK3|SYS_MANSM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|52307557|gb|AAU38057.1| SerS protein [Mannheimia succiniciproducens MBEL55E] Length = 430 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 197/432 (45%), Positives = 267/432 (61%), Gaps = 9/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ ++ + L+E+ + L + E ++A+RN+ S +G Sbjct: 1 MIDPNLLRNNLAEVAATLKLKRNFILDTKELAELEEQRKALQVETETLQAKRNARSKAVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + +L ++ E E+ + L + IPN+P +EVP+G Sbjct: 61 AAKARG--ENIAPLLAEMDDMGHELATVKAELDEILAELNTIALTIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEA-LGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +EN I G ++H +GE G +DF KLSGARF+V+ G +A + RAL Sbjct: 119 SENKEISRWGTPRQFDFEIKDHVTLGENLAGGIDFAAGAKLSGARFAVMKGQVAKMHRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSE 233 QFM+DLHT +HGYTE P LV +YGTGQ+PKF +D+F TT LIPT+E Sbjct: 179 AQFMLDLHTEQHGYTETYVPYLVNHTTLYGTGQLPKFGEDLFHTTPLEGEVPYALIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL EI+ ++ LP+R T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 VPVTNLVRDEILNTEDLPIRMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPD 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E + + AE++L+ L L YR + LCTGD+GF +CKTYDLEVW+ Q+ YREISSC Sbjct: 299 KSMEALEELTAHAEKVLQLLGLPYRKMLLCTGDMGFGSCKTYDLEVWVPAQDTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY N DGSVT+P VL Sbjct: 359 SNMWDFQARRMQARCRSKTDKKTRLVHTLNGSGLAVGRTLVAVLENYQNEDGSVTVPEVL 418 Query: 414 RPYMNNLAVIKK 425 RPYM L VI K Sbjct: 419 RPYMGGLEVIGK 430 >gi|289577292|ref|YP_003475919.1| seryl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289527005|gb|ADD01357.1| seryl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 423 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 195/426 (45%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ IR NPE + A++ + + + L LDE+ R ++ ++E ++ RRN S I + Sbjct: 1 MIDVKRIRSNPEAIKRAIELKKDKADIDKFLKLDERRRQMLVELEALKNRRNVESDNIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V L E L ++ +E+E EV L+ ++ IPN+P E VP G S Sbjct: 61 LKREGK--DVSDLIAEMKELSSKIKEMEQEVKEVEEQLEGILWTIPNIPHESVPTGDSDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + H+EIGE L ++DF+ A +++G+RF+ G A LERAL Sbjct: 119 DNVEVRRWGETRKFDFEPKPHWEIGEELDILDFEAAARVTGSRFTFYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGYTEV P +V +M GTGQ+PKF +D F + IPT+EV +TN+ Sbjct: 179 FMLDLHVEKHGYTEVFPPFMVHRRSMLGTGQLPKFEEDAFKVYGTDYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y II+ LP+ + FR EAGSAGRDTRG++RQHQF K ELV T + S+ E Sbjct: 239 YRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M AEE+L+ L L YRVV++CTGDLGF+A K YD+EVW+ Y E+SSCS C +F Sbjct: 299 EKMTKDAEEVLQLLGLPYRVVAICTGDLGFTASKKYDIEVWMPSYGRYVEVSSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR + ++ HTLNGSGVAVGR AILENY DGSV IP VLRPYM Sbjct: 359 QARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYMK- 417 Query: 420 LAVIKK 425 + VIKK Sbjct: 418 VDVIKK 423 >gi|319947603|ref|ZP_08021833.1| serine--tRNA ligase [Streptococcus australis ATCC 700641] gi|319746291|gb|EFV98554.1| serine--tRNA ligase [Streptococcus australis ATCC 700641] Length = 446 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 276/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 22 MLDIKRIRTDFDAVAEKLATRGVDTAILNEMKEIDAKRRDILVKVESLKAERNTVSAEIA 81 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 82 QAKR--NKENADDKIAAMQTLSAEVKALDAELAEIDARLTEFTTTLPNIPADSVPVGADE 139 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 140 DDNVEVRRWGTPREFDFEPKAHWDLGEDLDILDWERGGKVTGARFLFYKGLGARLERAIY 199 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 200 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNYVLIPTAEVPLTN 258 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 259 YYRDEIIDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 318 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 319 LEKMTANAENILQKLNLPYRVMALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 378 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 379 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 438 Query: 419 NLAVIKKE 426 VI + Sbjct: 439 GAEVIAPK 446 >gi|306830557|ref|ZP_07463724.1| serine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304427275|gb|EFM30380.1| serine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 425 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 200/428 (46%), Positives = 270/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + + LD+K R L+ K E +A RN+ SA I Sbjct: 1 MLDIKRIRNDFDEVAKKLATRGVAAEKLAELKELDDKRRELLVKSESAKAERNTASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N L + + E E+ L + + +PN+P +VP+G Sbjct: 61 QAKR--NKEDASEQIAAMQKLSADIKATDAELAEIDDKLAEFTTTLPNIPAADVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPRDFDFDIKAHWDLGEDLGILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 238 YYRGEILDGKELPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPETSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M++ AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVANAENILQKLGLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVISPK 425 >gi|284800367|ref|YP_003412232.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284993552|ref|YP_003415320.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|284055929|gb|ADB66870.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284059019|gb|ADB69958.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5923] Length = 436 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 181/426 (42%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N + + L+ R + + E LD++ R LI + E ++++RN S +I Sbjct: 10 MLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIA 69 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E P+G S Sbjct: 70 KLKREKQDADAK--IEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNIPHESTPVGESE 127 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + + H+++G L ++DF+ A K++G+RF A LERAL Sbjct: 128 DDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 187 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 188 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 247 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 248 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYVA 307 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ N YREISSCS + Sbjct: 308 LEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNSYREISSCSNFES 367 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY +ADGSV IP VL+ YM Sbjct: 368 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDADGSVRIPKVLQGYMG 427 Query: 419 NLAVIK 424 + I+ Sbjct: 428 GIEKIE 433 >gi|218782225|ref|YP_002433543.1| seryl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] gi|226701615|sp|B8FNA6|SYS_DESAA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|218763609|gb|ACL06075.1| Seryl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] Length = 424 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 192/426 (45%), Positives = 272/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R N + + AL R+ E L+ R ++ ++E++R +RN S I Sbjct: 1 MLDLKYVRANLDAVKTALANRNQETLLAGFEDLEAGRRTVLAEVEELRRKRNEVSGTIAV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG L + + ++ LE E +L +L+ IPN+P E VP+G N Sbjct: 61 MKREGK--DAADLMADMKEVSGKIKDLESGLKEKEEALNELLMRIPNIPHESVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G+ + + H++IGE LG++DF+RA +++G+RF + G A +ERAL Sbjct: 119 DNVEVKRRGEPRNFDFEPQAHWDIGEGLGILDFERAARITGSRFPLYFGDGALMERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+ HT+ HGY EV P +V + M GTGQ+PKF +D+F + IPT+EV +TN+ Sbjct: 179 FMLMTHTTRHGYKEVLPPFIVNRKTMTGTGQLPKFEEDLFKLEGWEYFLIPTAEVPVTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI+E ++LPL +T P FRSEAGSAG+DTRG++RQHQF K E+V + ++S+ E Sbjct: 239 HAEEILEEEALPLYYTAFTPCFRSEAGSAGKDTRGLIRQHQFNKVEMVKFSHPDNSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E ML AE IL+ L L YRV++LCTGD+GF A KTYDLEVW+ Q +YREISSCS C +F Sbjct: 299 EGMLQNAETILQELGLPYRVLNLCTGDIGFGAAKTYDLEVWMPQQGVYREISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R++ K HTLNGSG+AVGR L AILENY ADGSV IP VLRP+M Sbjct: 359 QARRANIRFKSKGKKGTSHVHTLNGSGLAVGRSLAAILENYQQADGSVIIPEVLRPFMGG 418 Query: 420 LAVIKK 425 VI+K Sbjct: 419 REVIEK 424 >gi|16804784|ref|NP_466269.1| seryl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|47095554|ref|ZP_00233163.1| seryl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|224502844|ref|ZP_03671151.1| seryl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|254827313|ref|ZP_05232000.1| seryl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254830817|ref|ZP_05235472.1| seryl-tRNA synthetase [Listeria monocytogenes 10403S] gi|254899796|ref|ZP_05259720.1| seryl-tRNA synthetase [Listeria monocytogenes J0161] gi|254912999|ref|ZP_05263011.1| seryl-tRNA synthetase [Listeria monocytogenes J2818] gi|254937380|ref|ZP_05269077.1| seryl-tRNA synthetase [Listeria monocytogenes F6900] gi|255029506|ref|ZP_05301457.1| seryl-tRNA synthetase [Listeria monocytogenes LO28] gi|30173190|sp|Q8Y3T4|SYS_LISMO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|16412247|emb|CAD00960.1| seryl-trna synthetase [Listeria monocytogenes EGD-e] gi|47016164|gb|EAL07088.1| seryl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258599694|gb|EEW13019.1| seryl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258609986|gb|EEW22594.1| seryl-tRNA synthetase [Listeria monocytogenes F6900] gi|293591001|gb|EFF99335.1| seryl-tRNA synthetase [Listeria monocytogenes J2818] Length = 427 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 181/426 (42%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N + + L+ R + + E LD++ R LI + E ++++RN S +I Sbjct: 1 MLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E P+G S Sbjct: 61 KLKREKQDADAK--IEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNIPHESTPVGESE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + + H+++G L ++DF+ A K++G+RF A LERAL Sbjct: 119 DDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYVA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ N YREISSCS + Sbjct: 299 LEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNSYREISSCSNFES 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY +ADGSV IP VL+ YM Sbjct: 359 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDADGSVRIPKVLQGYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GIEKIE 424 >gi|322377063|ref|ZP_08051555.1| serine--tRNA ligase [Streptococcus sp. M334] gi|321281776|gb|EFX58784.1| serine--tRNA ligase [Streptococcus sp. M334] Length = 424 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 278/427 (65%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDAAVLNEMKEIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D + L ++ L+ E ++ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKITDMQNLSSEVKALDAELADIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERAL Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY NADGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|307708238|ref|ZP_07644705.1| seryl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307615684|gb|EFN94890.1| seryl-tRNA synthetase [Streptococcus mitis NCTC 12261] Length = 424 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 276/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDAAILNEMKEIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGVDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|261253432|ref|ZP_05946005.1| seryl-tRNA synthetase [Vibrio orientalis CIP 102891] gi|260936823|gb|EEX92812.1| seryl-tRNA synthetase [Vibrio orientalis CIP 102891] Length = 435 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 190/434 (43%), Positives = 267/434 (61%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E V + L+++ +PN+P ++VP G + Sbjct: 61 KMAAGDKDGAEEIKKQIGTLGSDLDAKKVELDAVMAQLEEITLSVPNLPADDVPNGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ + ++H ++GE G +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 DNVEISRWGEPKTYDFELKDHVDLGEMGGGLDFASATKITGARFIVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT EHGY+E+ P LV ++++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTEEHGYSEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLEEKVNDEEPRKLSLI 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+ I + LPL+ T P FRSEAGS GRDTRG++R HQF K ELV I Sbjct: 241 PTAEVPVTNMVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 TR EDS E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Q YRE Sbjct: 301 TRPEDSMDALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE 360 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN ADG + I Sbjct: 361 ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI 420 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM I Sbjct: 421 PAVLQKYMAGATHI 434 >gi|167034601|ref|YP_001669832.1| seryl-tRNA synthetase [Pseudomonas putida GB-1] gi|189083580|sp|B0KLW8|SYS_PSEPG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166861089|gb|ABY99496.1| seryl-tRNA synthetase [Pseudomonas putida GB-1] Length = 426 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 197/428 (46%), Positives = 276/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRGQLQEVADRLASRGFSLDVARIESLEERRKAVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L + + +L + E + + L ++ IPN+P VP+G S + Sbjct: 61 AKAKG--EDIAPLMADVERMANELAAGKLELDGIQAELDGILLTIPNLPDASVPVGASED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H +GE G +DF+ A KLSGARF+VL G +A L RAL Q Sbjct: 119 DNVEVRRWGTPKAFDFEIKDHVALGEVSGGLDFEAAAKLSGARFAVLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LHT EHGY E P LV+ A+ GTGQ+PKF +D+F T +LIPT+EVSL Sbjct: 179 FMINLHTGEHGYEEHYTPYLVQAPALQGTGQLPKFEEDLFKITREGEADFYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL + EI+++K LPL+ P FRSEAG++GRDTRGM+RQHQF K E+V + S Sbjct: 239 TNLVAGEILDAKQLPLKLVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPAKSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV++LCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAERVLQLLELPYRVLALCTGDMGFGAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSILVPEVLKPY 418 Query: 417 MNNLAVIK 424 M + VI+ Sbjct: 419 MGGVEVIR 426 >gi|331266974|ref|YP_004326604.1| seryl-tRNA synthetase [Streptococcus oralis Uo5] gi|326683646|emb|CBZ01264.1| seryl-tRNA synthetase [Streptococcus oralis Uo5] Length = 424 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 275/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDAAILNEMKEIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E ++ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELADIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFKPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELKDTNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|315284062|ref|ZP_07872027.1| seryl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313612292|gb|EFR86469.1| seryl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 427 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 180/426 (42%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N + + L+ R + + E LD++ R LI + E ++++RN S +I Sbjct: 1 MLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E P+G S Sbjct: 61 KLKREKQDADAK--IEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNIPHESTPVGESE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + H+++G L ++DF+ A K++G+RF A LERAL Sbjct: 119 DDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ N YREISSCS + Sbjct: 299 LEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNSYREISSCSNFES 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY + DGSV IP VL+ YM Sbjct: 359 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDEDGSVRIPKVLQGYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GVEKIE 424 >gi|315222160|ref|ZP_07864069.1| seryl-tRNA synthetase [Streptococcus anginosus F0211] gi|315188786|gb|EFU22492.1| seryl-tRNA synthetase [Streptococcus anginosus F0211] Length = 425 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 278/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + + D K R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDTIAQKLATRGVDAVTLDKMKEFDSKRRELLVKVENLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E E+ ++L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELAEIDATLTEFTTTLPNIPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPRVFDFDVKAHWDLGENLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-QKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELSDTNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 238 YYRGEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEHSYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 + +I + Sbjct: 418 GVKMIAPK 425 >gi|293364834|ref|ZP_06611551.1| serine--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307703083|ref|ZP_07640030.1| seryl-tRNA synthetase [Streptococcus oralis ATCC 35037] gi|291316284|gb|EFE56720.1| serine--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307623476|gb|EFO02466.1| seryl-tRNA synthetase [Streptococcus oralis ATCC 35037] Length = 424 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 276/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDAAILNEMKEIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E ++ + L + + +PN+P + VPIG Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELADIDAKLTEFTTTLPNIPADSVPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGSPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELKDTNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY NADGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNADGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|324992052|gb|EGC23974.1| serine--tRNA ligase [Streptococcus sanguinis SK405] gi|325697635|gb|EGD39520.1| serine--tRNA ligase [Streptococcus sanguinis SK160] gi|327459354|gb|EGF05700.1| serine--tRNA ligase [Streptococcus sanguinis SK1] gi|327490570|gb|EGF22351.1| serine--tRNA ligase [Streptococcus sanguinis SK1058] Length = 425 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 201/428 (46%), Positives = 280/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + S+D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAEKLATRGVDAATLNQMKSIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKTLDATLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEELDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|256826794|ref|YP_003150753.1| seryl-tRNA synthetase [Cryptobacterium curtum DSM 15641] gi|256582937|gb|ACU94071.1| seryl-tRNA synthetase [Cryptobacterium curtum DSM 15641] Length = 427 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 270/425 (63%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R+N E + A+ R+ LDE R I + E ++A RN S +IG Sbjct: 1 MLDARFVRENQEAVAEAMANRNFPWDPARFSELDEARRAAIVEEEALQAERNRASKEIGS 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + K + E+L + ++ +L L+ +PN+P E P+G Sbjct: 61 LMAAGDKEHAEEAKAAVRAVNEKLETATVQREKIDEALHTLLMGVPNIPHETTPVGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G + H+++G L ++D DRA KLSG+RF +L G A LERAL Sbjct: 121 ENPEVRRWGVPRQFNFDFKPHWDLGSELDIIDPDRAVKLSGSRFMLLGGLGARLERALIN 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTNL 239 FM D HT G+ E P LV E M GTGQ+PKF +D+F T D +LIPT+EV+LTN+ Sbjct: 181 FMADTHT-SRGFKEWWCPALVNRETMTGTGQLPKFEEDLFKTKDESLYLIPTAEVTLTNI 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ E++++ LPLR+T P FR EAGSAGRDTRG++R HQF K E+V + E+++ E Sbjct: 240 HAGEVLDAAELPLRYTAFTPCFREEAGSAGRDTRGLIRLHQFDKVEMVKFAKPEEAYDEL 299 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M + AE IL++L+L YRV+SLCTGDLGFSA KTYDLEVWL + Y+EISSCS CG+F Sbjct: 300 ESMTAEAEYILQKLELPYRVISLCTGDLGFSAAKTYDLEVWLPSYDAYKEISSCSCCGDF 359 Query: 360 QSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RR + +YRD S K ++ +TLNGSG+AVGR + AILENY N DGSVT+P L PYM Sbjct: 360 QARRADIKYRDAESFKGTRYVYTLNGSGLAVGRTMAAILENYQNEDGSVTVPDALVPYMG 419 Query: 419 NLAVI 423 + VI Sbjct: 420 GVKVI 424 >gi|224498407|ref|ZP_03666756.1| seryl-tRNA synthetase [Listeria monocytogenes Finland 1988] Length = 427 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 181/426 (42%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N + + L+ R + + E LD++ R LI + E ++++RN S +I Sbjct: 1 MLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E P+G S Sbjct: 61 KLKREKQDADAK--IEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNIPHESTPVGESE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + + H+++G L ++DF+ A K++G+RF A LERAL Sbjct: 119 DDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ N YREISSCS + Sbjct: 299 LEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNSYREISSCSNFES 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY +ADGSV IP VL+ YM Sbjct: 359 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDADGSVRIPKVLQGYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GVEKIE 424 >gi|146293103|ref|YP_001183527.1| seryl-tRNA synthetase [Shewanella putrefaciens CN-32] gi|166223288|sp|A4Y6Z5|SYS_SHEPC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|145564793|gb|ABP75728.1| seryl-tRNA synthetase [Shewanella putrefaciens CN-32] Length = 428 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 201/429 (46%), Positives = 262/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R L R ++ L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELAVTAERLATRGFILDVAHLTQLEEKRKSLQVATEELQAARNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G VDA+ + L QL + E V + + +PN+P E PIG Sbjct: 61 AKARG--EDVDAIMAQVGDLGSQLDAKKLELAAVLEEVNAIAMSMPNLPDESAPIGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G S ++H ++GE L +DF A K++G+RF V+ G +A L RALGQ Sbjct: 119 QNVEVRRWGTPRSFDFPIKDHIDLGEGLNGLDFKSAVKITGSRFIVMKGQIARLNRALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV + ++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I++ LP++ T FRSEAGS G+DTRG++RQHQF K ELV + + ED Sbjct: 239 PLTNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + + AE +L+RL L YR V LCTGD+GF + KTYD+EVWL GQN YREISSCS Sbjct: 299 SMAALETLTNHAETVLQRLGLPYRTVVLCTGDMGFGSSKTYDIEVWLPGQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR HTLNGSG+AVGR L+AILENY NADGSVTIP LR Sbjct: 359 NMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSVTIPEALR 418 Query: 415 PYMNNLAVI 423 YM L I Sbjct: 419 SYMGGLTQI 427 >gi|307572335|emb|CAR85514.1| serS [Listeria monocytogenes L99] Length = 436 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 181/426 (42%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N + + L+ R + + E LD++ R LI + E ++++RN S +I Sbjct: 10 MLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIA 69 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E P+G S Sbjct: 70 KLKREKQDADAK--IEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNIPHESTPVGESE 127 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + H+++G L ++DF+ A K++G+RF A LERAL Sbjct: 128 DDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 187 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 188 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 247 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 248 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYAA 307 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ N YREISSCS + Sbjct: 308 LEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNSYREISSCSNFES 367 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY +ADGSV IP VL+ YM Sbjct: 368 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDADGSVRIPKVLQGYMG 427 Query: 419 NLAVIK 424 + I+ Sbjct: 428 GIEKIE 433 >gi|315612585|ref|ZP_07887498.1| serine--tRNA ligase [Streptococcus sanguinis ATCC 49296] gi|315315566|gb|EFU63605.1| serine--tRNA ligase [Streptococcus sanguinis ATCC 49296] Length = 424 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 274/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++P + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDPAILNEMKKIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E ++ S L + + +PN+P + VPIG Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELADIDSKLTEFTTTLPNIPADSVPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTG PKF DD F ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGNYPKFKDDTFELKATNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|238019657|ref|ZP_04600083.1| hypothetical protein VEIDISOL_01531 [Veillonella dispar ATCC 17748] gi|237863698|gb|EEP64988.1| hypothetical protein VEIDISOL_01531 [Veillonella dispar ATCC 17748] Length = 426 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 191/425 (44%), Positives = 271/425 (63%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + + L RH + E +S ++ R LI K+E+++A RNS + +I Q Sbjct: 1 MLDLKFVRENIDLVQQNLDNRHTKGDLETFVSAYDERRQLIGKVEELKALRNSVTEEISQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N D E + + + L+ +V + L+ +PN+ VP+G + Sbjct: 61 LKR--NKENADDKIAEMKKVGDDIAELDNRIRDVEAKLRDAALMLPNMCDASVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ R G+ + H+++GE L ++DF+RA K+SGARF+V G A LERAL Sbjct: 119 ENVEQRKWGEPRQFDFDIQAHWDLGENLDILDFNRAGKMSGARFTVYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH + GYTE+ P +V E + GTGQ+PKFA+DM+ D + IPT+EV+LTN Sbjct: 179 FMVDLHVDKQGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVEDTEYFLIPTAEVTLTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EI+ + LP +T FR+EAGSAGRDTRG++RQHQF K E+V + + EDS+ E Sbjct: 239 HSGEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSYKEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AEE+L+ L+L +RV++LCTGD+GF + KTYD+EVW+ Q YREISSCS +F Sbjct: 299 ETLTDNAEEVLRLLELPFRVITLCTGDIGFGSAKTYDVEVWMPAQGKYREISSCSNMTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N ++R +F HTLNGSG+AVGR + AILENY ADGSV IP VL PYM Sbjct: 359 QARRANIKFRRGPKGKPEFVHTLNGSGLAVGRTVAAILENYQQADGSVVIPKVLVPYMGG 418 Query: 420 LAVIK 424 + VIK Sbjct: 419 VEVIK 423 >gi|16272084|ref|NP_438284.1| seryl-tRNA synthetase [Haemophilus influenzae Rd KW20] gi|260580586|ref|ZP_05848413.1| seryl-tRNA synthetase [Haemophilus influenzae RdAW] gi|1174543|sp|P43833|SYS_HAEIN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|1573062|gb|AAC21787.1| seryl-tRNA synthetase (serS) [Haemophilus influenzae Rd KW20] gi|260092648|gb|EEW76584.1| seryl-tRNA synthetase [Haemophilus influenzae RdAW] Length = 429 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 192/431 (44%), Positives = 261/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P LR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLDVIGK 429 >gi|311694707|gb|ADP97580.1| seryl-tRNA synthetase [marine bacterium HP15] Length = 424 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 197/426 (46%), Positives = 275/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R E + L ++ E + L+E+ R L E++++ +N S IG+ Sbjct: 1 MLDPKRVRTQTEEIARRLTIKNFEFDTATFEQLEERRRALQVSTENLQSEQNKRSKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L +E LK++ E E + L ++ IPN+P E+VP G S + Sbjct: 61 AKAAG--EDIQPLLDEVEDLKKKRSEAEDELRSLQEELNGFLAGIPNLPDEDVPAGESED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR+ G + ++H +GE L +DF+ AT+L+ +RF+V+ G +A L RAL Q Sbjct: 119 DNVEIRTWGTPKTFDFEPKDHVALGEGLKGLDFETATRLAHSRFAVMRGPVARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+DLHT EHGY E P LV +++YGTGQ+PKF +D+F T +LIPT+EV TN Sbjct: 179 FMLDLHTREHGYLETYVPYLVNADSLYGTGQLPKFEEDLFKTEGEHPLYLIPTAEVPATN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L S I+++ LPL+ P FRSEAGS GRDTRGM+RQHQF K ELV + R DS Sbjct: 239 LVSDSILDAAELPLQMVCHTPCFRSEAGSYGRDTRGMIRQHQFDKVELVHVVRPADSDAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE++L+ L+L YRVV LC GD+GFSA KTYDLEVWL GQ+ +REISSCS + Sbjct: 299 LEALTGHAEKVLQMLELPYRVVVLCGGDMGFSAAKTYDLEVWLPGQDKFREISSCSNTRD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM++R+R+P + + HTLNGSG+AVGR LIA++ENY ADGS+ +P VLRPYM Sbjct: 359 FQARRMHARWRNPETGKPEPVHTLNGSGLAVGRALIAVMENYQQADGSIVVPEVLRPYMG 418 Query: 419 NLAVIK 424 + +I+ Sbjct: 419 GVDIIQ 424 >gi|289168522|ref|YP_003446791.1| seryl-tRNA synthetase [Streptococcus mitis B6] gi|288908089|emb|CBJ22929.1| seryl-tRNA synthetase [Streptococcus mitis B6] Length = 424 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 277/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDAAILNEMKEIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGSPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY NADGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNADGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|46908933|ref|YP_015322.1| seryl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47092366|ref|ZP_00230157.1| seryl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|217966055|ref|YP_002351733.1| seryl-tRNA synthetase [Listeria monocytogenes HCC23] gi|226225298|ref|YP_002759405.1| seryl-trna synthetase [Listeria monocytogenes Clip81459] gi|254824888|ref|ZP_05229889.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254851948|ref|ZP_05241296.1| seryl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|254930981|ref|ZP_05264340.1| seryl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|254991691|ref|ZP_05273881.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J2-064] gi|255520029|ref|ZP_05387266.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|290891927|ref|ZP_06554924.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|300763494|ref|ZP_07073492.1| seryl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|67461792|sp|Q71W17|SYS_LISMF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783033|sp|B8DD73|SYS_LISMH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|259511675|sp|C1L082|SYS_LISMC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|46882206|gb|AAT05499.1| seryl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47019345|gb|EAL10087.1| seryl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|217335325|gb|ACK41119.1| seryl-tRNA synthetase [Listeria monocytogenes HCC23] gi|225877760|emb|CAS06475.1| seryl-trna synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605246|gb|EEW17854.1| seryl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|290558521|gb|EFD92038.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|293582527|gb|EFF94559.1| seryl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293594128|gb|EFG01889.1| seryl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300515771|gb|EFK42820.1| seryl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|328468223|gb|EGF39229.1| seryl-tRNA synthetase [Listeria monocytogenes 1816] gi|328469095|gb|EGF40043.1| seryl-tRNA synthetase [Listeria monocytogenes 220] gi|332313177|gb|EGJ26272.1| Seryl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 427 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 181/426 (42%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N + + L+ R + + E LD++ R LI + E ++++RN S +I Sbjct: 1 MLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E P+G S Sbjct: 61 KLKREKQDADAK--IEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNIPHESTPVGESE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + H+++G L ++DF+ A K++G+RF A LERAL Sbjct: 119 DDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ N YREISSCS + Sbjct: 299 LEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNSYREISSCSNFES 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY +ADGSV IP VL+ YM Sbjct: 359 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDADGSVRIPKVLQGYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GIEKIE 424 >gi|209964355|ref|YP_002297270.1| seryl-tRNA synthetase [Rhodospirillum centenum SW] gi|238065106|sp|B6ISM1|SYS_RHOCS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|209957821|gb|ACI98457.1| seryl-tRNA synthetase SerS [Rhodospirillum centenum SW] Length = 424 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 238/427 (55%), Positives = 298/427 (69%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ IR NPE D L +R L P S IL LD++ R ++ +ARRN S IG Sbjct: 1 MHDLRAIRDNPEAFDTGLARRGLPPASAAILDLDQRRRAAQTSFQECQARRNEASRLIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G L +E + LKE++P LE+E+ + + L L++ +PN+P +VP G + Sbjct: 61 YKKDGK--DAQPLLDEVAALKERIPALEEEDRRLGAELDALLAALPNLPAADVPEGKDEH 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR VG P I +++HFE+GEALGLMDF+ A ++SGARF+VL G LA LERALG Sbjct: 119 DNVEIRRVG-TPRDIPGAKQHFELGEALGLMDFEGAARMSGARFTVLKGQLARLERALGD 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT E GYTEVS PLLVRDEA++GTGQ+PKFADD+F TT G WLIPT+EV+LTNL Sbjct: 178 FMLDLHTREFGYTEVSPPLLVRDEAVFGTGQLPKFADDLFRTTTGHWLIPTAEVTLTNLA 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II++++LP R T P FRSEAGSAG+DTRGM+RQHQF K ELVSIT E S EHE Sbjct: 238 NDSIIDAEALPWRLTARTPCFRSEAGSAGKDTRGMIRQHQFMKVELVSITLPEQSEAEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM AE +L+RL L +R V LCTGD+GFSA KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 298 RMTKAAETVLERLGLPFRTVVLCTGDMGFSARKTYDIEVWLPGQGAYREISSCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +R R K + HTLNGSGVAVGR LIA++ENY DGS+ +P LRPYM Sbjct: 358 ARRMKARSRPKGEKGTQVVHTLNGSGVAVGRALIAVMENYQQPDGSILVPEALRPYMGGQ 417 Query: 421 AVIKKEH 427 I Sbjct: 418 ERITAHG 424 >gi|295675841|ref|YP_003604365.1| seryl-tRNA synthetase [Burkholderia sp. CCGE1002] gi|295435684|gb|ADG14854.1| seryl-tRNA synthetase [Burkholderia sp. CCGE1002] Length = 431 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 195/431 (45%), Positives = 275/431 (63%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFTALEAERRDTQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E S + +++ + ++ + L L+ +PN+ E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVSGIGDEMKASAVKLEDIQTRLSDLLLGVPNLAHESVPVGNDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G ++H ++G LG +DF+ KLSGARF++L G +A L RAL Q Sbjct: 119 HNVEVRRWGTPRQFDFEVKDHVDVGTPLG-LDFETGAKLSGARFTMLRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE+ P +V + +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQQHGYTEIYTPYIVNPDILYGTGQLPKFADDMFRVEKGGGESTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + + Sbjct: 238 ISLTNTVRESIVDADALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVWL QN YREISSC Sbjct: 298 ASYDALEQMVGHAEAILQKLELPYRVITLCTGDMGFSAAKTYDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LEN+ NADGSVT+PT L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENFQNADGSVTVPTAL 416 Query: 414 RPYMNNLAVIK 424 RPY+ + ++ Sbjct: 417 RPYLGGIERLE 427 >gi|223043384|ref|ZP_03613430.1| seryl-tRNA synthetase [Staphylococcus capitis SK14] gi|222443173|gb|EEE49272.1| seryl-tRNA synthetase [Staphylococcus capitis SK14] Length = 428 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 267/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + ++ R +P+ + +L LDE+ R LI K E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPEKVKSKIELRGDDPKVVDEVLELDEQRRQLISKTEEMKARRNKVSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L +++ + + +EV + ++ ++ IPN+ ++VP G S Sbjct: 61 QKKR--NKEDADDVIAEMRNLGDEIKENDAKLNEVDNKVRDILIRIPNLINDDVPQGDSD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DF+RA K+SGARF LT A LERAL Sbjct: 119 EENVELKKWGTPREFDFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP +FT FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 239 FYRDEIIQPGVLPEKFTGQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIEKPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEDMTKNAESILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ NS + HTLNGSG+AVGR AI+ENY N DG++TIP L P+M Sbjct: 359 FQARRANIRFKRDNSAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTITIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTKISK 425 >gi|158423363|ref|YP_001524655.1| seryl-tRNA synthetase [Azorhizobium caulinodans ORS 571] gi|172047946|sp|A8I4J4|SYS_AZOC5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|158330252|dbj|BAF87737.1| seryl-tRNA synthetase, class IIa [Azorhizobium caulinodans ORS 571] Length = 445 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 240/444 (54%), Positives = 302/444 (68%), Gaps = 19/444 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-----EYILSLDEKNRILIKKIEDIRARRNSNS 55 M DI+WIR+ PE L AL +R + + +LSLD R + K+E + ARRN+ S Sbjct: 1 MHDIKWIREEPEALVRALVRRQVAKDEAVALRDKLLSLDTARRETLTKLEGLLARRNAAS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IGQA A + + AL +E + LK +P LE+ + L L++ IPNVPLE VP Sbjct: 61 KEIGQAKAAKDEARAAALMDEVAKLKVDVPELEQSAKAIEGELDGLLAAIPNVPLESVPE 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G ++N+ ++ VG K + ++HFE+GEALGLMDF+ A+KLSGARF V G LA LE Sbjct: 121 GKDEHDNVELKVVGTKRNYAFTPKQHFELGEALGLMDFETASKLSGARFVVNKGPLARLE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------------ 223 RALGQF +D+H +HGYTEV+ PLLVRDE MYGT Q+PKF DD F Sbjct: 181 RALGQFFLDMHVEQHGYTEVNPPLLVRDETMYGTAQLPKFFDDQFAVYAGSTQRAIGDET 240 Query: 224 --DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + WLIPT+EV LTNL I+ LPLRFT P FR+EAGSAGRDTRGM+RQHQF Sbjct: 241 DAERYWLIPTAEVPLTNLVRDSILSEDELPLRFTANTPCFRAEAGSAGRDTRGMIRQHQF 300 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E+VSIT E S EH RML+CAE +L++LDLHYRVV+LCTGD+GF++ KT+D+EVWL Sbjct: 301 TKVEMVSITTPETSEEEHHRMLACAEAVLQKLDLHYRVVTLCTGDMGFASRKTFDIEVWL 360 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 GQN YREISSCS CG+FQ+RRMN+RYR K +F HTLNGSGVAVGR L+A+LE Y Sbjct: 361 PGQNAYREISSCSVCGDFQARRMNARYRPAEGKGPRFVHTLNGSGVAVGRALVAVLETYQ 420 Query: 402 NADGSVTIPTVLRPYMNNLAVIKK 425 DGS+ +P VL+ YM + VI K Sbjct: 421 QEDGSIVVPDVLQSYMGGVTVIAK 444 >gi|315026714|gb|EFT38646.1| seryl-tRNA synthetase [Enterococcus faecalis TX2137] Length = 423 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 203/425 (47%), Positives = 277/425 (65%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN E + LK R ++ + L+LDE+ R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEERRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R + + H+EIGEALG++DF+R K+SG+RF G A LERA+ Sbjct: 119 AANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 F++D H +EHGYTEV P LV +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFLLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI++++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILDAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVRFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM Sbjct: 359 FQARRALIRYRDKTG-HVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|311070660|ref|YP_003975583.1| seryl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310871177|gb|ADP34652.1| seryl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 425 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 194/426 (45%), Positives = 272/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD + +R N + + L + + + LDEK R LI K+E+++ RRN S Q+ Sbjct: 1 MLDTKMLRANFQEVKAKLVHKGEDLSDFDKFEELDEKRRELIGKVEELKGRRNEVSQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D + E + E++ L++E V S+L ++ IPN+P + VP+G + Sbjct: 61 VLKREKK--DADHIIKEMREVGEEIKTLDEELRTVESTLDTILLSIPNIPHDSVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++NI IR G+ P+ + + H++I + L ++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNIEIRKWGEAPAFSYEPKPHWDIADDLNILDFERAAKVTGSRFVFYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH E+ YTEV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ +SLP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILSGESLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ Q+ YREISSCS Sbjct: 299 LEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+AVGR + AILENY DGSV IP VLRPYM Sbjct: 359 FQARRANIRFRREAKGKPEHVHTLNGSGLAVGRTVAAILENYQQDDGSVVIPKVLRPYMG 418 Query: 419 NLAVIK 424 N VIK Sbjct: 419 NREVIK 424 >gi|322387197|ref|ZP_08060807.1| serine--tRNA ligase [Streptococcus infantis ATCC 700779] gi|321141726|gb|EFX37221.1| serine--tRNA ligase [Streptococcus infantis ATCC 700779] Length = 424 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 203/427 (47%), Positives = 276/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDAAILNEMKEIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E E+ + L + + +PN+P + VPIG Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELAEIDARLTEFTTTLPNIPADSVPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTG PKF DD F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGNYPKFKDDTFEISDTNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|227543803|ref|ZP_03973852.1| serine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300908871|ref|ZP_07126334.1| serine--tRNA ligase [Lactobacillus reuteri SD2112] gi|227186218|gb|EEI66289.1| serine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300894278|gb|EFK87636.1| serine--tRNA ligase [Lactobacillus reuteri SD2112] Length = 435 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 204/431 (47%), Positives = 290/431 (67%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQ P+ L R ++ + + +++LD+K R L+++ E ++A+RN S +IG Sbjct: 1 MLDIKKIRQEPDFYKEKLATRGVKSEEIDEVIALDKKRRELLQQTETMKAQRNEASKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A G DA ET L +++ L+ E + L ++ +PNVP + VP+ + Sbjct: 61 EAKRNG--ESADAAIKETRELGDKIKELDAELEVNDAELHDKMAHLPNVPHDGVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + +R VGK + H++IGE LG++DFDRA K+SGARF G A LERA+ Sbjct: 119 DGAVELRRVGKVRDFDFEPKHHWDIGENLGILDFDRAGKVSGARFVYYLGLGAQLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H + GYTEV P +V ++MYGTGQ PKF + ++ + LIPT+EV LTN Sbjct: 179 NFMLDEH-MKEGYTEVLPPYIVNADSMYGTGQFPKFKEGVYQVNGEDMTLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I ++ LP+ T L PSFRSEAG+AGRDTRG++R HQF K E+V T+ E+S+ E Sbjct: 238 YYRGEVIPTEELPVYVTALTPSFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPENSWDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE ILK+L+L Y V++L TGD+ F+A +T+DLE+W+ QN YRE+SSCS C + Sbjct: 298 LEKMTANAENILKKLNLPYHVITLTTGDMSFTASETHDLELWMPAQNKYREVSSCSNCLD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM+++YRD N K L++ HTLNGSG+AVGR + AILENY NADGSVTIP VL PYM+ Sbjct: 358 FQARRMHTQYRDENGK-LQYVHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLVPYMH 416 Query: 419 NLAVIKKEHIL 429 + I KE+ + Sbjct: 417 GVTKITKENAV 427 >gi|322374872|ref|ZP_08049386.1| serine--tRNA ligase [Streptococcus sp. C300] gi|321280372|gb|EFX57411.1| serine--tRNA ligase [Streptococcus sp. C300] Length = 424 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 278/427 (65%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDAAILNEMKEIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ +L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKVLDAELGEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY NADGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNADGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|227518019|ref|ZP_03948068.1| seryl-tRNA synthetase [Enterococcus faecalis TX0104] gi|307287079|ref|ZP_07567152.1| seryl-tRNA synthetase [Enterococcus faecalis TX0109] gi|227074541|gb|EEI12504.1| seryl-tRNA synthetase [Enterococcus faecalis TX0104] gi|306501858|gb|EFM71148.1| seryl-tRNA synthetase [Enterococcus faecalis TX0109] gi|315151232|gb|EFT95248.1| seryl-tRNA synthetase [Enterococcus faecalis TX0012] gi|315165765|gb|EFU09782.1| seryl-tRNA synthetase [Enterococcus faecalis TX1302] Length = 423 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 205/425 (48%), Positives = 278/425 (65%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN E + LK R ++ + L+LDE+ R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEERRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R + + H+EIGEALG++DF+R K+SG+RF G A LERA+ Sbjct: 119 AANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H +EHGYTEV P LV +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI+E++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILEAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD + +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM Sbjct: 359 FQARRALIRYRDKTGQ-VQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|125974866|ref|YP_001038776.1| seryl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|256003878|ref|ZP_05428865.1| seryl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281418668|ref|ZP_06249687.1| seryl-tRNA synthetase [Clostridium thermocellum JW20] gi|166219869|sp|A3DI04|SYS_CLOTH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|125715091|gb|ABN53583.1| seryl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|255992216|gb|EEU02311.1| seryl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281407752|gb|EFB38011.1| seryl-tRNA synthetase [Clostridium thermocellum JW20] gi|316939077|gb|ADU73111.1| seryl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 423 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 195/425 (45%), Positives = 271/425 (63%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR NPE L AL+KR +LSLDEK R + ++E +R ++N NS I + Sbjct: 1 MLDIKLIRSNPEILKKALQKRKDNFDVNGLLSLDEKRRKTLVELEQLRNKQNENSKLIPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V +L E +L E++ L+ E ++ L ++ IPN+P E VP+G S Sbjct: 61 YKKEGK--DVSSLMEEMKSLSEKIKALDAEVRKIDEELNAILLTIPNIPHESVPMGDSDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + H+EIGE L ++DF +A K++GARF+ G A LERAL Sbjct: 119 DNVEVRRWGEPRKFDFTPKPHWEIGENLDILDFSKAAKVTGARFTFYKGLGARLERALMN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGY EV P LV +M GTGQ+PKF +D F +D + IPT+EV +TN+ Sbjct: 179 FMLDLHVDKHGYVEVFPPFLVHRNSMIGTGQLPKFEEDAFKVSDTDYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y +I++ K LP++ + FR+EAG+AGRDTRG++RQHQF K ELV T E S+ E Sbjct: 239 YREQILDVKDLPIKHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTTPETSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEE+L+ L++ YRVV +C GDLGF+A YD+EVW+ N Y EISSCS +F Sbjct: 299 EKLTRDAEEVLQMLEIPYRVVKICVGDLGFTAAMKYDIEVWMPSYNRYVEISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR ++R ++ +F HTLNGSGVA+GR ILENY DGSV +P VLR Y+ Sbjct: 359 QARRAGIKFRRGLNEKPEFVHTLNGSGVAMGRATACILENYQQEDGSVVVPKVLREYLGG 418 Query: 420 LAVIK 424 ++VIK Sbjct: 419 ISVIK 423 >gi|91782396|ref|YP_557602.1| seryl-tRNA synthetase [Burkholderia xenovorans LB400] gi|123168824|sp|Q143D9|SYS_BURXL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|91686350|gb|ABE29550.1| seryl-tRNA synthetase [Burkholderia xenovorans LB400] Length = 431 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 201/431 (46%), Positives = 274/431 (63%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFTALEAERRDTQTRTEEMQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E S + +++ E+ L L+ +PN+P E VP+G Sbjct: 61 LKGKG--EDTSAVMAEVSGIGDEMKASAARLDEIQKRLSDLLLGVPNLPHESVPLGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF++L G +A L RAL Q Sbjct: 119 ENVEVRRWGTPRQFEFEVKDHVDVGAPLG-LDFETGAKLSGARFTMLRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT HGYTE+ P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQHHGYTEIYTPYIVNPEILYGTGQLPKFADDMFRVEKGGDENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E+ +LP++ T +P FRSEAGS GRDTRG++RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSILEADALPIKLTAHSPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSC Sbjct: 298 TSYDALEQMVGHAETILQKLELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +RYR+ K + HTLNGSG+AVGR L+A+LEN+ NADGSVT+P L Sbjct: 358 SNTESFQARRMQARYRNAQGK-PELVHTLNGSGLAVGRTLVAVLENFQNADGSVTVPVAL 416 Query: 414 RPYMNNLAVIK 424 RPY+ L ++ Sbjct: 417 RPYLGGLERLE 427 >gi|257087920|ref|ZP_05582281.1| seryl-tRNA synthetase [Enterococcus faecalis D6] gi|256995950|gb|EEU83252.1| seryl-tRNA synthetase [Enterococcus faecalis D6] Length = 423 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 204/425 (48%), Positives = 277/425 (65%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN E + LK R ++ + L+LDE+ R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEERRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R + + H+EIGEALG++DF+R K+SG+RF G A LERA+ Sbjct: 119 AANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H +EHGYTEV P LV +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI++++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILDAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVRFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM Sbjct: 359 FQARRALIRYRDKTG-HVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|73661318|ref|YP_300099.1| seryl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123643864|sp|Q4A172|SYS_STAS1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|72493833|dbj|BAE17154.1| seryl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 427 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 196/428 (45%), Positives = 268/428 (62%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R +PE L + KR ++ + + +L LDE+ R LI + E+++A RN S +I Sbjct: 1 MLDIKLFRNDPEFLKEKVAKRGMDSKVVDEVLELDEQRRQLISQAEEMKAERNKVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D L +++ +L+ ++V L +S IPN+ ++VP G + Sbjct: 61 QKKR--NKEDADDAIAAMRNLGDEIKVLDDTLNQVDVDLNDKLSRIPNIIHDDVPEGATD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +NI ++ G + + H+++ E L ++DF+RA K+SGARF LTG A LERAL Sbjct: 119 EDNIEVKRWGTPRTFEFEDKAHWDLVEELEMVDFERAAKVSGARFVFLTGDGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV ++MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADSMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII LP +FT + +RSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 239 YYRNEIIAPDVLPAKFTAQSACYRSEAGSAGRDTRGLIRLHQFDKVEMVRIEKPEDSWQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V LCTGD+GF + KTYDLEVWL N Y+EISSCS + Sbjct: 299 LEDMTHHAEAILEELGLPYRRVILCTGDIGFGSSKTYDLEVWLPSYNDYKEISSCSNITD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DGSVTIP VL P+M Sbjct: 359 FQARRSNIRFKRDKNAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGSVTIPEVLVPFMG 418 Query: 419 NLAVIKKE 426 VI+ Sbjct: 419 GKTVIRPT 426 >gi|325273409|ref|ZP_08139664.1| seryl-tRNA synthetase [Pseudomonas sp. TJI-51] gi|324101454|gb|EGB99045.1| seryl-tRNA synthetase [Pseudomonas sp. TJI-51] Length = 426 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 197/428 (46%), Positives = 276/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+E+ + + + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRGQLQEVADRLASRGFSLDVARIESLEERRKAVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L + + +L + E E+ + L ++ IPN+P VP+G S + Sbjct: 61 AKAKG--EDIAPLMADVERMANELAAGKAELDEIQAELDGILLTIPNLPDASVPVGASED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H +GE G +DF+ A KLSGARF+VL G +A L RAL Q Sbjct: 119 DNVEVRRWGTPQTFDFDIKDHVALGELSGGLDFEAAAKLSGARFAVLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LHT EHGY E P LV+ A+ GTGQ+PKF +D+F T +LIPT+EVSL Sbjct: 179 FMINLHTGEHGYEEHYTPYLVQAPALQGTGQLPKFEEDLFKITREGEADFYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL + I+++K LPL+ P FRSEAG++GRDTRGM+RQHQF K E+V + S Sbjct: 239 TNLVAGAILDAKQLPLKLVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPAKSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + AE +L+ L+L YRV++LCTGD+GF A KTYDLEVW+ Q+ YREISSCS C Sbjct: 299 EALEGLTANAERVLQLLELPYRVLALCTGDMGFGAVKTYDLEVWVPSQDKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PY Sbjct: 359 GDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPY 418 Query: 417 MNNLAVIK 424 M + VI+ Sbjct: 419 MGGVEVIR 426 >gi|312867885|ref|ZP_07728090.1| serine--tRNA ligase [Streptococcus parasanguinis F0405] gi|311096640|gb|EFQ54879.1| serine--tRNA ligase [Streptococcus parasanguinis F0405] Length = 425 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 200/428 (46%), Positives = 277/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E+++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAKKLATRGVDAAILNEMKEIDAKRRDILVKVENLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E E+ + L + + +PN+P + VPIG Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDTELAEIDAKLTEFTTTLPNIPADSVPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFGFEPKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVVNAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVIAPK 425 >gi|325686987|gb|EGD29011.1| serine--tRNA ligase [Streptococcus sanguinis SK72] Length = 425 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 280/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + S+D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAKKLATRGVDAATLNQMKSIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ ++ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKITAMQKLSAEVKTLDATLADLDAKLTEFTTTLPNIPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDETDGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|154684531|ref|YP_001419692.1| seryl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|166200599|sp|A7Z0D5|SYS_BACA2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|52313148|emb|CAH55604.1| Seryl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|154350382|gb|ABS72461.1| SerS [Bacillus amyloliquefaciens FZB42] Length = 425 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 190/427 (44%), Positives = 274/427 (64%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R N + + L + + + LDEK R LI K+E+++ +RN S Q+ Sbjct: 1 MIDTKVLRANFQEVKAKLIPKGEDLSDFDKFEELDEKRRELIGKVEELKGKRNEVSQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D + E + E++ L++E V ++L+ ++ IPN+P + VP+G + Sbjct: 61 VLKREKK--DADHIIKEMREVGEEIKKLDEELRTVETTLETILLSIPNIPHDSVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++NI IR G+ P+ + + H++I + L ++DF+RA+K++G+RF G A LERAL Sbjct: 119 DDNIEIRKWGEAPAFSYEPKPHWDIADHLNILDFERASKVTGSRFVFYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH E+ YTEV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMLDLHVDEYDYTEVIPPYMVNRTSMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ ++LP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILSGENLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ Q+ YREISSCS Sbjct: 299 LEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+AVGR + AILENY DGSV IP VLRPYM Sbjct: 359 FQARRANIRFRREAKGKPEHVHTLNGSGLAVGRTVAAILENYQQEDGSVIIPKVLRPYMG 418 Query: 419 NLAVIKK 425 N VIK Sbjct: 419 NKEVIKP 425 >gi|229550614|ref|ZP_04439339.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255971641|ref|ZP_05422227.1| seryl-tRNA synthetase [Enterococcus faecalis T1] gi|255974606|ref|ZP_05425192.1| seryl-tRNA synthetase [Enterococcus faecalis T2] gi|256956923|ref|ZP_05561094.1| seryl-tRNA synthetase [Enterococcus faecalis DS5] gi|256960726|ref|ZP_05564897.1| seryl-tRNA synthetase [Enterococcus faecalis Merz96] gi|257078596|ref|ZP_05572957.1| seryl-tRNA synthetase [Enterococcus faecalis JH1] gi|257081438|ref|ZP_05575799.1| seryl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257421433|ref|ZP_05598423.1| seryl-tRNA synthetase [Enterococcus faecalis X98] gi|293384900|ref|ZP_06630738.1| serine--tRNA ligase [Enterococcus faecalis R712] gi|293388590|ref|ZP_06633091.1| serine--tRNA ligase [Enterococcus faecalis S613] gi|294781552|ref|ZP_06746890.1| serine--tRNA ligase [Enterococcus faecalis PC1.1] gi|307269018|ref|ZP_07550381.1| seryl-tRNA synthetase [Enterococcus faecalis TX4248] gi|307278221|ref|ZP_07559302.1| seryl-tRNA synthetase [Enterococcus faecalis TX0860] gi|312901191|ref|ZP_07760476.1| seryl-tRNA synthetase [Enterococcus faecalis TX0470] gi|312908712|ref|ZP_07767652.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312979173|ref|ZP_07790879.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|229304333|gb|EEN70329.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255962659|gb|EET95135.1| seryl-tRNA synthetase [Enterococcus faecalis T1] gi|255967478|gb|EET98100.1| seryl-tRNA synthetase [Enterococcus faecalis T2] gi|256947419|gb|EEU64051.1| seryl-tRNA synthetase [Enterococcus faecalis DS5] gi|256951222|gb|EEU67854.1| seryl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256986626|gb|EEU73928.1| seryl-tRNA synthetase [Enterococcus faecalis JH1] gi|256989468|gb|EEU76770.1| seryl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|257163257|gb|EEU93217.1| seryl-tRNA synthetase [Enterococcus faecalis X98] gi|291077818|gb|EFE15182.1| serine--tRNA ligase [Enterococcus faecalis R712] gi|291082048|gb|EFE19011.1| serine--tRNA ligase [Enterococcus faecalis S613] gi|294451409|gb|EFG19873.1| serine--tRNA ligase [Enterococcus faecalis PC1.1] gi|306505096|gb|EFM74285.1| seryl-tRNA synthetase [Enterococcus faecalis TX0860] gi|306514687|gb|EFM83239.1| seryl-tRNA synthetase [Enterococcus faecalis TX4248] gi|310625311|gb|EFQ08594.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|311288045|gb|EFQ66601.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|311291710|gb|EFQ70266.1| seryl-tRNA synthetase [Enterococcus faecalis TX0470] gi|315031222|gb|EFT43154.1| seryl-tRNA synthetase [Enterococcus faecalis TX0017] gi|315036450|gb|EFT48382.1| seryl-tRNA synthetase [Enterococcus faecalis TX0027] gi|315147058|gb|EFT91074.1| seryl-tRNA synthetase [Enterococcus faecalis TX4244] gi|315156336|gb|EFU00353.1| seryl-tRNA synthetase [Enterococcus faecalis TX0043] gi|315158469|gb|EFU02486.1| seryl-tRNA synthetase [Enterococcus faecalis TX0312] gi|315168211|gb|EFU12228.1| seryl-tRNA synthetase [Enterococcus faecalis TX1341] gi|323479332|gb|ADX78771.1| seryl-tRNA synthetase [Enterococcus faecalis 62] gi|327533948|gb|AEA92782.1| serine--tRNA ligase [Enterococcus faecalis OG1RF] gi|329577577|gb|EGG59011.1| serine--tRNA ligase [Enterococcus faecalis TX1467] Length = 423 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 204/425 (48%), Positives = 277/425 (65%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN E + LK R ++ + L+LDE+ R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEERRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R + + H+EIGEALG++DF+R K+SG+RF G A LERA+ Sbjct: 119 AANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H +EHGYTEV P LV +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI++++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILDAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM Sbjct: 359 FQARRALIRYRDKTG-HVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|205371952|ref|ZP_03224771.1| seryl-tRNA synthetase [Bacillus coahuilensis m4-4] Length = 425 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 186/427 (43%), Positives = 266/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R + E + L R + +LDEK R LI + E +++ RN S +I Sbjct: 1 MLDIKYLRSHFEEVKERLSHRGEDLTDFGKFEALDEKRRELIVQTEKLKSERNEVSQKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q E + D L + + +++ + E V L L+ IPN+P E VP+G + Sbjct: 61 QMKKEKQNA--DELIVQMREVGQKIKEWDDELRVVEEELDMLLLSIPNIPHESVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+ P+ ++ H+++ L L+DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVEVRKWGEVPTFNFEAKPHWDVAADLSLLDFERAAKVTGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH +HGYTE+ P LV +M GTGQ+PKF +D F + IPTSEV +TN Sbjct: 179 NFMMDLHYDQHGYTEMLPPYLVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTSEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ + LPL + + +FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 YHRDEILNGEELPLAYAAYSANFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+++ AE++L+ L+L YRV+S+CT DLGF+A K +D+EVW+ YREISSCS + Sbjct: 299 LEKLVGHAEKVLQLLNLPYRVLSMCTADLGFTAAKKFDIEVWIPSYETYREISSCSNFES 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DGSV IP VLRPYM Sbjct: 359 FQARRANIRFRREPNAKPEHVHTLNGSGLAIGRTVAAILENYQQEDGSVVIPEVLRPYMG 418 Query: 419 NLAVIKK 425 + + Sbjct: 419 GIEKMTP 425 >gi|254453692|ref|ZP_05067129.1| seryl-tRNA synthetase [Octadecabacter antarcticus 238] gi|198268098|gb|EDY92368.1| seryl-tRNA synthetase [Octadecabacter antarcticus 238] Length = 430 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 207/429 (48%), Positives = 282/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R P S +L++DE R I E +A N + +G Sbjct: 1 MHDIRAIRENPAAFDAALSRRGDAPLSAELLAMDEARRAKILAAETAQADANKAAKDVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + L+ S K Q+ L + + L ++ IPN+P ++VP+G N Sbjct: 61 AKARGDNEEFERLRALVSEKKAQIAQLNDQAKAQATGLTARLAMIPNLPADDVPMGADEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G + EHF+I MDF+ A K+SG+RF +++G +A L RAL Q Sbjct: 121 DNVEISRWGTPRTFDFTPAEHFDISAVKPNMDFETAAKISGSRFVLMSGAVARLHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E+G TE++ P+LVRD+AMYGT ++PKFA D + TT+G WLI TSE+ LT + Sbjct: 181 FMLDIHTVENGLTEMNTPVLVRDDAMYGTDKLPKFAGDSYQTTEGMWLISTSEIPLTYIA 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + + I++ SLP R+T FRSEAGSAGRDT GMLRQHQF K E+VS+T ++S TE + Sbjct: 241 AGDTIDAASLPRRYTAHTLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSVTHPDESDTEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE++L+RL++ YR V LCTGD+GF A +T+D+E WL GQN YREISS ST G FQ Sbjct: 301 RMLRCAEDLLERLEIPYRTVLLCTGDMGFGARRTFDIEAWLPGQNAYREISSVSTTGEFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + +F HTLNGSG+AVGRCLIA+LEN ADGSVTIPT L +M Sbjct: 361 ARRMNARFKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVTIPTALHRHMGGK 420 Query: 421 AVIKKEHIL 429 +I + L Sbjct: 421 TMINADGTL 429 >gi|330833399|ref|YP_004402224.1| hypothetical protein SSUST3_1623 [Streptococcus suis ST3] gi|329307622|gb|AEB82038.1| hypothetical protein SSUST3_1623 [Streptococcus suis ST3] Length = 424 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 269/427 (62%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + I LD K R ++ +E+++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDGVAAKLATRGVAAETLANIKELDAKRREILVTVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L + L+ + E+ L +I+ +PN P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSADVKNLDAQLLEIDEELNAIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EENVEVRRWGTPREFTFEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H +E GY E+ P +V +M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIAE-GYQEIITPYMVNHNSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EI+E K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V E S+ E Sbjct: 238 YYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNAYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDAADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 + VIK Sbjct: 418 GVEVIKP 424 >gi|288904563|ref|YP_003429784.1| seryl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|288731288|emb|CBI12838.1| seryl-tRNA synthetase [Streptococcus gallolyticus UCN34] Length = 425 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 269/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + + LD+K R L+ K E +A RN+ SA I Sbjct: 1 MLDIKRIRNDFDEVAKKLATRGVAAEKLAELKELDDKRRELLVKSESAKAERNTASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N L + + E E+ L + + +PN+P +VP+G Sbjct: 61 QAKR--NKEDASEQIAAMQKLSADIKATDAELAEIDDKLAEFTTTLPNIPAADVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWRTPRDFDFDIKAHWDLGEDLGILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 238 YYRGEILDGKELPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPETSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M++ AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVANAENILQKLGLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVISPK 425 >gi|118579055|ref|YP_900305.1| seryl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|166222758|sp|A1ALM7|SYS_PELPD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|118501765|gb|ABK98247.1| seryl-tRNA synthetase [Pelobacter propionicus DSM 2379] Length = 422 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 192/425 (45%), Positives = 273/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+N + + L R LD+K L+K+ E ++A RNS S +I + Sbjct: 1 MLDMKFIRENIDETERRLATRGESCTLGGFRELDQKRLALLKESEALKALRNSVSDEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S + + +++ ++ E +V +L+ ++ +PN+P P+G S N Sbjct: 61 IK---DKSQAQDKILQMREVSQKIKGMDDELKQVDEALQGILLTVPNLPDPATPVGKSEN 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G S + H+EIGE LG++DF+ KL+GARF++ G A +ERAL Sbjct: 118 DNVEIRKWGTPGSYGFTPKPHWEIGEELGILDFECGAKLTGARFTLSRGAGARMERALIS 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 FM+DLHT+ HGY EV P +V ++M GTGQ+PKF +D+F T +LIPT+EV +TN+ Sbjct: 178 FMLDLHTASHGYLEVLPPFMVNRDSMTGTGQLPKFEEDLFKMTDPEYFLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ LP+R+ P FR EAGS G+DTRG++RQHQF K ELV + S E Sbjct: 238 HRGEILKKSDLPIRYAAYTPCFRREAGSYGKDTRGLIRQHQFNKVELVKFSHPSQSAEEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AE++L+ L+L YRV++LC+ D+GFSA +TYDLEVWL GQN YREISSCS G+F Sbjct: 298 EKLTADAEKVLQLLELPYRVMALCSADIGFSAARTYDLEVWLPGQNCYREISSCSCFGDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R+ +F HTLNGSG+AVGR L+AILENY DGSV IP LRPYM Sbjct: 358 QARRANIRFREEEKSKPEFVHTLNGSGLAVGRTLVAILENYQQEDGSVVIPQALRPYMGG 417 Query: 420 LAVIK 424 L I+ Sbjct: 418 LERIQ 422 >gi|313621991|gb|EFR92612.1| seryl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 436 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 181/426 (42%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N E + L+ R + + E LD++ R LI + E ++++RN S +I Sbjct: 10 MLDVKLLRNNFEEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIA 69 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E P+G S Sbjct: 70 KLKREKQDADAK--IEEMRVVGDRIKTLDIELREIDEKLDTILMSIPNIPHESTPVGESE 127 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + H+++G L ++DF+ A K++G+RF A LERAL Sbjct: 128 DDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 187 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 188 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 247 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 248 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYVA 307 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ + YREISSCS + Sbjct: 308 LEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYDSYREISSCSNFES 367 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY ADGSV IP VL+ YM Sbjct: 368 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQEADGSVRIPKVLQGYMG 427 Query: 419 NLAVIK 424 + I+ Sbjct: 428 GIEKIE 433 >gi|312880090|ref|ZP_07739890.1| seryl-tRNA synthetase [Aminomonas paucivorans DSM 12260] gi|310783381|gb|EFQ23779.1| seryl-tRNA synthetase [Aminomonas paucivorans DSM 12260] Length = 424 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 203/426 (47%), Positives = 276/426 (64%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++W+R + E LK R+ + ++ ++E+ R ++ + E ++ARRN S ++G Sbjct: 1 MLDLKWVRDHLEETRTFLKNRNHSFDLDGLMQVEERRRSVLGEAETLQARRNEGSRRVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G S A E L E++ LE E+ + +L + IPN P E VP+G S Sbjct: 61 LRGRGEDS--SAAMEEMRLLGERVKELETEQKRLDEALVDRMLQIPNRPHESVPVGASEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G S + H+E+GEALG++DF+R +L+ +RF VL G A LERAL Q Sbjct: 119 DNPEVRRWGIPRSFPFEPKPHWELGEALGILDFERGVRLAESRFVVLKGWGARLERALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 FM+D HT HG+ E++ P LV + M GTGQ+PKFA+D++ C+ D WLIPT+EV +TNL Sbjct: 179 FMLDRHTQNHGFLEIAPPYLVNSKTMRGTGQLPKFAEDLYRCSNDDLWLIPTAEVPMTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI++ K LPL +T P FR EAG+ GRD +GMLR HQF K ELV + R EDS+ E Sbjct: 239 HAGEILQEKELPLYYTAYTPCFRREAGTYGRDMKGMLRVHQFDKVELVKLCRPEDSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + CAE IL+ L+L +R + LCTGD+GFSA KTYDLEVW+ QN YREISSCS C +F Sbjct: 299 ESLTRCAESILQDLELPFRTICLCTGDMGFSAAKTYDLEVWIPSQNCYREISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 QSRRM++RYR +F HTLNGSG+AVGRCLIA+LENY DG+V IP L PY+ Sbjct: 359 QSRRMDTRYRPEGGGKPRFVHTLNGSGIAVGRCLIALLENYQEEDGAVRIPQALVPYLGG 418 Query: 420 LAVIKK 425 + Sbjct: 419 KERLVP 424 >gi|262283251|ref|ZP_06061018.1| seryl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] gi|262261503|gb|EEY80202.1| seryl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] Length = 425 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 200/428 (46%), Positives = 280/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDTVAEKLATRGVDAATLNQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDATLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVISPK 425 >gi|288958288|ref|YP_003448629.1| seryl-tRNA synthetase [Azospirillum sp. B510] gi|288910596|dbj|BAI72085.1| seryl-tRNA synthetase [Azospirillum sp. B510] Length = 423 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 228/424 (53%), Positives = 308/424 (72%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ IR+NPE D L +R L P S +L LD + R ++++++ARRN + +IG Sbjct: 1 MHDLRAIRENPEAFDRGLGRRGLAPMSSSLLDLDGRRRAAQTQMQEMQARRNEAAKEIGL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A EG + +E +TLK++LP +E++E + + L +++ +PN+P ++VP+G Sbjct: 61 AKREGR--DAQPILDEMATLKDRLPQVEEDERSLGAELDAILAGLPNIPADDVPLGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G P+ I ++H+E+GEALGLMDF+ A ++SGARF+VL G LA LERAL Sbjct: 119 ENVEVRRWG-TPANIANPKQHYELGEALGLMDFEAAARMSGARFTVLKGGLARLERALAD 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+D+HTSEHG+TE++ PL+VRD A++GTGQ+PKF +D+F TT +LIPTSEV LTNL Sbjct: 178 FMLDIHTSEHGFTEIAPPLMVRDTALFGTGQLPKFEEDLFKTTASDHYLIPTSEVPLTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + +I+ ++ LPLR+T L P FR+EAGSAGRDTRGM+RQHQFWK E+V+IT + S EH Sbjct: 238 VNDQIVAAEELPLRYTALTPCFRAEAGSAGRDTRGMIRQHQFWKVEMVAITAPDQSEDEH 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +RM CAE IL+RL L YR + LCTGD+GFS+ KTYD+EVWL GQN YREISS S CG+F Sbjct: 298 QRMTRCAETILERLGLPYRTIVLCTGDMGFSSRKTYDVEVWLPGQNAYREISSVSNCGDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RRM +R R K +F HTLNGSGVAVGRCLIA+LENY DGS+ +P LRPYM Sbjct: 358 QARRMKARCRAKGEKQTQFVHTLNGSGVAVGRCLIAVLENYQQPDGSILVPEALRPYMRG 417 Query: 420 LAVI 423 + I Sbjct: 418 VERI 421 >gi|223934048|ref|ZP_03626000.1| seryl-tRNA synthetase [Streptococcus suis 89/1591] gi|223897275|gb|EEF63684.1| seryl-tRNA synthetase [Streptococcus suis 89/1591] Length = 424 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 270/427 (63%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + I LD K R ++ +E+++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDGVAAKLATRGVAAETLANIKELDAKRREILVTVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L + L+ + E+ L +I+ +PN P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSADVKNLDAQLLEIDEELNAIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EENVEVRRWGTPREFTFEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H +E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIAE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EI+E K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V E S+ E Sbjct: 238 YYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNAYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDAADSKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 + VIK Sbjct: 418 GVEVIKP 424 >gi|314934952|ref|ZP_07842311.1| serine--tRNA ligase [Staphylococcus caprae C87] gi|313652882|gb|EFS16645.1| serine--tRNA ligase [Staphylococcus caprae C87] Length = 428 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 267/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + ++ R +P+ + +L LDE+ R LI K E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPEKVKSKIELRGDDPKVVDEVLELDEQRRQLISKTEEMKARRNKVSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L +++ + + +EV + ++ ++ IPN+ ++VP G S Sbjct: 61 QKKR--NKEDADDVIAEMRNLGDEIKENDAKLNEVDNKVRDILIRIPNLINDDVPQGDSD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DF+RA K+SGARF LT A LERAL Sbjct: 119 EENVELKKWGTLREFDFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP +FT FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 239 FYRDEIIQPGVLPEKFTGQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIEKPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEDMTKNAESILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ NS + HTLNGSG+AVGR AI+ENY N DG++TIP L P+M Sbjct: 359 FQARRANIRFKRDNSAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTITIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTKISK 425 >gi|313631521|gb|EFR98803.1| seryl-tRNA synthetase [Listeria seeligeri FSL N1-067] Length = 428 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 180/426 (42%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N E + L+ R + + E LD++ R LI + E ++++RN S +I Sbjct: 1 MLDVKLLRNNFEEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E P+G + Sbjct: 61 KLKREKQDADAK--IEEMRVVGDRIKTLDIELKEIDEKLDTILMSIPNIPHESTPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + H+++G L ++DF+ A K++G+RF A LERAL Sbjct: 119 DDNVEIRKWGEVRDFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYVA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ N YREISSCS + Sbjct: 299 LEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNSYREISSCSNFES 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY +ADGSV IP L+ YM Sbjct: 359 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDADGSVRIPKALQGYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GVERIE 424 >gi|324994145|gb|EGC26059.1| serine--tRNA ligase [Streptococcus sanguinis SK678] Length = 425 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 200/428 (46%), Positives = 280/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAEKLATRGVDAATLNQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKTLDATLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEELDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|325695149|gb|EGD37050.1| serine--tRNA ligase [Streptococcus sanguinis SK150] Length = 425 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 200/428 (46%), Positives = 280/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAEKLATRGVDAATLNQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDANLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEDLNILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|120598819|ref|YP_963393.1| seryl-tRNA synthetase [Shewanella sp. W3-18-1] gi|166223290|sp|A1RJJ4|SYS_SHESW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|120558912|gb|ABM24839.1| seryl-tRNA synthetase [Shewanella sp. W3-18-1] Length = 428 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 200/429 (46%), Positives = 262/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R L R ++ L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELAVTAERLATRGFILDVAHLTQLEEKRKSLQVATEELQAARNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G VDA+ + L Q+ + E V + + +PN+P E PIG Sbjct: 61 AKARG--EDVDAIMAQVGDLGSQVDAKKLELAAVLEEVNAIAMSMPNLPDESAPIGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G S ++H ++GE L +DF A K++G+RF V+ G +A L RALGQ Sbjct: 119 QNVEVRRWGTPRSFDFPIKDHIDLGEGLNGLDFKSAVKITGSRFIVMKGQIARLNRALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV + ++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I++ LP++ T FRSEAGS G+DTRG++RQHQF K ELV + + ED Sbjct: 239 PLTNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + + AE +L+RL L YR V LCTGD+GF + KTYD+EVWL GQN YREISSCS Sbjct: 299 SMAALETLTNHAETVLQRLGLPYRTVVLCTGDMGFGSSKTYDIEVWLPGQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR HTLNGSG+AVGR L+AILENY NADGSVTIP LR Sbjct: 359 NMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSVTIPEALR 418 Query: 415 PYMNNLAVI 423 YM L I Sbjct: 419 SYMGGLTQI 427 >gi|289436021|ref|YP_003465893.1| hypothetical protein lse_2660 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172265|emb|CBH28811.1| serS [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 428 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 180/426 (42%), Positives = 267/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N E + L+ R + + E LD++ R LI + E ++++RN S +I Sbjct: 1 MLDVKLLRNNFEEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E P+G + Sbjct: 61 KLKREKQDADAK--IEEMRVVGDRIKTLDIELKEIDEKLDTILMSIPNIPHESTPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + H+++G L ++DF+ A K++G+RF A LERAL Sbjct: 119 DDNVEIRKWGEVRDFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ N YREISSCS + Sbjct: 299 LEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNSYREISSCSNFES 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY +ADGSV IP L+ YM Sbjct: 359 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDADGSVRIPKALQGYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GVERIE 424 >gi|217970182|ref|YP_002355416.1| seryl-tRNA synthetase [Thauera sp. MZ1T] gi|217507509|gb|ACK54520.1| seryl-tRNA synthetase [Thauera sp. MZ1T] Length = 430 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 193/431 (44%), Positives = 273/431 (63%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R +H+ L R LE + +L+++ + L + ++++ARRN+ S QIG Sbjct: 1 MLDIQLLRTQLDHVAARLATRGLELDTAAFQALEDERKQLQTRTQELQARRNALSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E + L + L E+ + + ++ +PN+P ++VP G Sbjct: 61 LKGKG--EDASAVMAEVAQLGDGLKACEQALPMLLERINAFLATLPNLPQDDVPAGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + R+H ++G LG +DF+ KLSG+RF+ L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPRAYDFEVRDHVDLGAPLG-LDFETGAKLSGSRFAFLRGPVARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT EHGYTE P +V A+YGTGQ+PKF +D+F ++LIPT+E Sbjct: 178 FMLDTHTREHGYTECYTPYIVNGSALYGTGQLPKFKEDLFWVLRGGDEEGLEQYLIPTAE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++LTN E++ +SLP+R T +P FRSEAGS GRD RGM+RQHQF K E+V I Sbjct: 238 ITLTNSVREEVLALESLPIRLTAHSPCFRSEAGSGGRDVRGMIRQHQFDKVEMVQIVEPA 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVWL QN YREISSC Sbjct: 298 KSKEALEQMVGHAEAILQKLELPYRVITLCTGDMGFSAAKTYDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R+++ K+ + HTLNGSG+AVGR L+A+LEN+ ADGS+ IP L Sbjct: 358 SNCESFQARRMQARFKNAQGKN-ELVHTLNGSGLAVGRTLVAVLENHQQADGSIVIPRAL 416 Query: 414 RPYMNNLAVIK 424 PYM + I+ Sbjct: 417 VPYMGGIERIE 427 >gi|308066924|ref|YP_003868529.1| Seryl-tRNA synthetase (serine--tRNA ligase) [Paenibacillus polymyxa E681] gi|171704681|gb|ACB54661.1| seryl tRNA synthetase [Paenibacillus polymyxa] gi|305856203|gb|ADM67991.1| Seryl-tRNA synthetase (Serine--tRNA ligase) [Paenibacillus polymyxa E681] Length = 427 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 182/429 (42%), Positives = 269/429 (62%), Gaps = 4/429 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R ++ AL+ R LD R L+++ E ++ RRN S ++ Sbjct: 1 MLDIKILRNELGRVEKALQNRGKSLDLINGFTDLDVSRRELLQESEGLKNRRNVVSGEVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D L E + +++ L+++ E+ + +L+ IPN+P + VP+G S Sbjct: 61 KLKK--NKENADDLIAEMRQVSDRIKELDEQVRELEVQIDELVMSIPNIPNDTVPVGASE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR + + H+E+ + L ++DF+ A K++G+RF+ G A LERAL Sbjct: 119 EDNVEIRRWSEPREFSFTPKAHWELAQDLDILDFEAAAKVTGSRFTFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FM+DLH+SEHGY E+ P +V +++YGTGQ+PKF +D+F D +LIPT+EV +TN Sbjct: 179 NFMMDLHSSEHGYEEMLPPYIVNRDSLYGTGQLPKFEEDLFKLRDTEYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ ++ LP + + FRSEAGSAGRDTRG++RQHQF K E++ + + S+ E Sbjct: 239 YHREEIMNAEQLPKYYVAYSSCFRSEAGSAGRDTRGLIRQHQFNKVEMLKLVHPDTSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE +L+ L L YRV++LCTGD+GF++ KTYDLEVWL +YREISSCS + Sbjct: 299 LEKMTNNAERVLQLLGLPYRVLALCTGDMGFTSAKTYDLEVWLPESGMYREISSCSNTED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + +F HTLNGSG+AVGR + AILENY DGS+ IP VLR YM Sbjct: 359 FQARRANIRFRPDSKAKPEFVHTLNGSGLAVGRTVAAILENYQQEDGSIVIPEVLRSYMR 418 Query: 419 NLAVIKKEH 427 + VI + Sbjct: 419 GIEVIAPKQ 427 >gi|259048107|ref|ZP_05738508.1| serine--tRNA ligase [Granulicatella adiacens ATCC 49175] gi|259035168|gb|EEW36423.1| serine--tRNA ligase [Granulicatella adiacens ATCC 49175] Length = 430 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 197/426 (46%), Positives = 271/426 (63%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR+N E + AL+ R ++ E + +LDE+ R LI K E ++ RN+ + +I Sbjct: 6 MLDMKRIRENFEEVATALENRGVDRATVEELRNLDEERRALITKTEQLKQYRNTVTEEIS 65 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N A E + E + + EV ++ + S +PN E VP+G Sbjct: 66 LLKR--NKEDASAKIAEMKQVGEDIKETDVLLAEVEEKVEYIASRLPNTAAEGVPVGADE 123 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G + H+E+ EAL ++DF+R K+SG+RF G A LERA+ Sbjct: 124 TENVEVRREGTPRVFDFEPKPHWEVAEALDILDFERGAKVSGSRFLYYKGLGARLERAIY 183 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLT 237 +M+DLH +HGYTE+ P +V +++MYGTGQ PKF +D+F T LIPT+EV LT Sbjct: 184 NYMLDLHVEKHGYTEMITPYMVNEQSMYGTGQFPKFKEDVFQLTDERNLTLIPTAEVPLT 243 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y++EI++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + EDSF Sbjct: 244 NYYANEILDEAQLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFAKPEDSFD 303 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+M AE++L+ L L +R + LCTGD+GFSA KTYD+EVW+ Q+ YREISSCS C Sbjct: 304 ELEKMTDNAEDVLRGLGLPFRTIVLCTGDMGFSAAKTYDVEVWIPAQDTYREISSCSNCV 363 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R+R +S ++ HTLNGSG+AVGR + AILENY N DGSVTIP L PYM Sbjct: 364 DFQARRAKIRFRREDSGKIELVHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALVPYM 423 Query: 418 NNLAVI 423 + I Sbjct: 424 GGVTKI 429 >gi|315640401|ref|ZP_07895513.1| serine--tRNA ligase [Enterococcus italicus DSM 15952] gi|315483839|gb|EFU74323.1| serine--tRNA ligase [Enterococcus italicus DSM 15952] Length = 426 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 205/428 (47%), Positives = 271/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQN E + L R + + LDE+ R L+ + E+++ RN SA+I Sbjct: 1 MLDIKVIRQNIEQVKEKLATRGVAEDKINEFVGLDEERRRLLVETEELKKHRNDVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q E + +++ L+ + L ++ +PN+P + VPIG Sbjct: 61 QLKRT--KEDATEKIEEMKQVGQKIKELDGTLATIDEKLTQIAVTLPNIPDDSVPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R K + H+E+ E LG++DF+R K+SG+RF G A LERAL Sbjct: 119 EDNVEVRRWHKTREFDFEPKPHWEVAEDLGILDFERGAKVSGSRFVYYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+DLH E GYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDLHVYEQGYTEMITPYIVNSQAMFGTGQFPKFKEDVFQLENTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 YS EI++ K LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + + S+ E Sbjct: 239 FYSQEILDEKDLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDADHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M AEEIL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 299 LEKMTQNAEEILQKLELPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD N K +++ HTLNGSG+AVGR + A+LENY NADGSVTIP VL YM Sbjct: 359 FQARRAMIRYRDSNGK-IRYVHTLNGSGLAVGRTVAAVLENYQNADGSVTIPDVLVKYMG 417 Query: 419 NLAVIKKE 426 L I KE Sbjct: 418 GLTKITKE 425 >gi|323490216|ref|ZP_08095433.1| seryl-tRNA synthetase [Planococcus donghaensis MPA1U2] gi|323396112|gb|EGA88941.1| seryl-tRNA synthetase [Planococcus donghaensis MPA1U2] Length = 424 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 186/425 (43%), Positives = 262/425 (61%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L KR + + LD K R LI + E ++A RN S I Sbjct: 1 MLDIRFVRANFEEVKAKLAKRGEDISVLDDFEGLDVKRRELIAQTEKLKAERNEASQNIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 D + + +Q+ ++++E V SL ++ +PN+P + VP G S Sbjct: 61 AMKRA--KENADEAITKMREVGDQIKVIDEELKAVEESLNYIMMRVPNIPHDSVPFGDSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N IR+ G KP+ + H+++G L ++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNEEIRTWGDKPAFDFEVKPHWDLGTDLNIIDFERAAKVTGSRFVFYRGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH EHGY E+ P +V E++ GTGQ+PKF +D F + IPTSEV +TN Sbjct: 179 NFMMDLHQEEHGYEEMLPPYMVNRESLTGTGQLPKFEEDAFLIEKEDYFLIPTSEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+ + LP F + + +FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 FYRDEILTADMLPQAFASYSSNFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEDSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE++L+ L L YRV+ +CT DLGF+A K YD+EVW+ Q YREISSCS + Sbjct: 299 LEKLTGHAEKVLQLLGLPYRVLKMCTADLGFTAAKKYDIEVWIPSQETYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N ++R + +F HTLNGSG+A+GR + A+LENY DGS+ IP VL+PYM Sbjct: 359 FQARRANIKFRREATGKPEFVHTLNGSGLAIGRTVAALLENYQQKDGSINIPEVLQPYMG 418 Query: 419 NLAVI 423 I Sbjct: 419 GKKTI 423 >gi|310639562|ref|YP_003944320.1| seryl tRNA synthetase [Paenibacillus polymyxa SC2] gi|309244512|gb|ADO54079.1| Seryl tRNA synthetase [Paenibacillus polymyxa SC2] Length = 427 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 183/429 (42%), Positives = 267/429 (62%), Gaps = 4/429 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R ++ AL+ R LD R L+++ E ++ RRN S ++ Sbjct: 1 MLDIKILRNELGRVEKALQNRGKSLDLINGFTDLDVSRRELLQESEGLKNRRNVVSGEVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D L E + +++ L+++ E+ + +L+ IPN+P E VP+G S Sbjct: 61 KLKK--NKENADDLIAEMRQVSDRIKELDEQVRELEVQIDELVMSIPNIPNETVPVGASE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR + + H+E+ + L ++DF+ A K++G+RF+ G A LERAL Sbjct: 119 EDNVEIRRWSEPREFSFTPKAHWELAQDLDILDFEAAAKVTGSRFTFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FM+DLH+SEHGY E+ P +V +++YGTGQ+PKF +D+F D +LIPT+EV +TN Sbjct: 179 NFMMDLHSSEHGYEEMLPPYIVNRDSLYGTGQLPKFEEDLFKLRDTEYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ + LP + + FRSEAGSAGRDTRG++RQHQF K E++ + + S+ E Sbjct: 239 YHREEIMNADQLPKYYVAYSSCFRSEAGSAGRDTRGLIRQHQFNKVEMLKLVHPDTSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE +L+ L L YRV++LCTGD+GF++ KTYDLEVWL +YREISSCS + Sbjct: 299 LEKMTNNAERVLQLLGLPYRVLALCTGDMGFTSAKTYDLEVWLPESGMYREISSCSNTED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R +F HTLNGSG+AVGR + AILENY DGS+ IP VLR YM Sbjct: 359 FQARRANIRFRPDAKAKPEFVHTLNGSGLAVGRTVAAILENYQQEDGSIVIPEVLRSYMR 418 Query: 419 NLAVIKKEH 427 + VI + Sbjct: 419 GIEVITPKQ 427 >gi|167837523|ref|ZP_02464406.1| seryl-tRNA synthetase [Burkholderia thailandensis MSMB43] Length = 433 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 195/430 (45%), Positives = 272/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + E+ + + L+ +PN+ E VP+G+ Sbjct: 61 MKGRG--EDTTAVMAEVGGIGDEMKASAVKLDEIQARVSDLMLQMPNLAHESVPVGSDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF+VL G +A L RAL Q Sbjct: 119 ENVEVRRWGTPRQFDFDVKDHVDVGTPLG-LDFETGAKLSGARFTVLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V + +YGTGQ+PKFA+DMF ++LI TSE Sbjct: 178 FMLDTHTLQHGYSETYTPYIVNPDVLYGTGQLPKFAEDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E+ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSIVEASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVTPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L+L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLELPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPVAL 416 Query: 414 RPYMNNLAVI 423 R YM + I Sbjct: 417 RSYMGGVERI 426 >gi|297543541|ref|YP_003675843.1| seryl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841316|gb|ADH59832.1| seryl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 423 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 195/426 (45%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ IR NPE + A++ + + + L LDE+ R ++ ++E ++ RRN S I + Sbjct: 1 MIDVKRIRGNPEAIKRAIELKKDKADIDKFLKLDERRRQMLVELEALKNRRNVESDNIAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V L E L ++ +E+E EV L+ ++ IPN+P E VPIG S Sbjct: 61 LKREGK--DVSDLIAEMKELSSKIKEMEQEVKEVEEQLEGILWTIPNIPHESVPIGDSDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + H+EIGE L ++DF+ A +++G+RF+ G A LERAL Sbjct: 119 DNVEVRRWGEPRKFDFEPKSHWEIGEELDILDFEAAARVTGSRFTFYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGYTEV P +V +M GTGQ+PKF +D F + IPT+EV +TN+ Sbjct: 179 FMLDLHVEKHGYTEVFPPFIVHRRSMLGTGQLPKFEEDAFKVYGTDYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y II+ LP+ + FR EAGSAGRDTRG++RQHQF K ELV T + S+ E Sbjct: 239 YRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M AEE+L+ L L YRVV++CTGDLGF+A K YD+EVW+ Y E+SSCS C +F Sbjct: 299 EKMTKDAEEVLQLLGLPYRVVAICTGDLGFTASKKYDIEVWMPSYGRYVEVSSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR + ++ HTLNGSGVAVGR AILENY DGSV IP VLRPYM Sbjct: 359 QARRANIKYRPKDGSKAQYVHTLNGSGVAVGRTFAAILENYQQEDGSVVIPEVLRPYMR- 417 Query: 420 LAVIKK 425 + +IKK Sbjct: 418 VDIIKK 423 >gi|171778068|ref|ZP_02919325.1| hypothetical protein STRINF_00160 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283050|gb|EDT48474.1| hypothetical protein STRINF_00160 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 425 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 269/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + + LD+K R L+ K E +A RN+ SA I Sbjct: 1 MLDIKRIRNDFDEVAKKLATRGVAAEKLAELKELDDKRRELLVKSESAKAERNTASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N L + + E E+ L + + +PN+P +VP+G Sbjct: 61 QAKR--NKEDASEQIAAMQKLSADIKATDAELAEIDEKLSEFTATLPNIPAADVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE L ++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPREFDFDIKAHWDLGEDLDILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F + ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELANSDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 238 YYRGEILDGKELPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPETSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M++ AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVANAENILQKLGLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVISPK 425 >gi|325977535|ref|YP_004287251.1| seryl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177463|emb|CBZ47507.1| serS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 425 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 268/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + + LD K R L+ K E +A RN+ SA I Sbjct: 1 MLDIKRIRNDFDEVAKKLATRGVAAEKLAELKELDNKRRELLVKSESAKAERNTASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N L + + E E+ L + + +PN+P +VP+G Sbjct: 61 QAKR--NKEDASEQIAAMQKLSADIKATDAELAEIDDKLAEFTTTLPNIPAADVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWRTPRDFDFDIKAHWDLGEDLGILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 238 YYRGEILDGKELPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPETSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M++ AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVANAENILQKLGLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVISPK 425 >gi|324991702|gb|EGC23634.1| serine--tRNA ligase [Streptococcus sanguinis SK353] Length = 425 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 279/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAEKLATRGVDAATLSQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDASLAELDAKLTEFTTTLPNIPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LENMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|303326195|ref|ZP_07356638.1| serine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] gi|302864111|gb|EFL87042.1| serine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] Length = 423 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 179/426 (42%), Positives = 259/426 (60%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +++ PE L AL RH E L LD + R L+ ++E ++++RN+ S Q+ Sbjct: 1 MIDLKLVQKQPEVLAKALADRHSELDVNEFLGLDARRRALLAEVEALKSQRNTASGQVAA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + +L E L +++ L+ + + + ++ + +PN+P VP+G Sbjct: 61 LKREGKDAG--SLLAELGGLSDRIKELDGQTAQAKADVEAWLMRVPNIPDASVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G REH ++G ALG +DF+RA +L+G+RF V A L+RAL Sbjct: 119 ENVEVTRWGTPRRFDFPVREHGDLGVALGGLDFERAARLTGSRFVVSLSWAARLDRALVN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 F +D HT Y EV P +V M GTGQ+PKF +D+F +LIPT+EV LTNL Sbjct: 179 FFLDRHTRHEDYIEVCPPYMVNRATMTGTGQLPKFEEDLFKLREWDYYLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ E+++ LP + P FRSEAGSAG+DTRG++R HQF K E+V +DSF + Sbjct: 239 HAGEVLDEADLPRAYCAATPCFRSEAGSAGKDTRGIIRMHQFTKVEMVRFAHPDDSFNQL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M A +L+ L+L YRV++LCTGD+GF + KTYD+EVWL QN YREISSCS CG+F Sbjct: 299 ELMCGHARHLLELLELPYRVITLCTGDMGFGSAKTYDVEVWLPAQNTYREISSCSNCGDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R++ K+ F HTLNGSG+ GR + AILEN DGSV +P L PYM+ Sbjct: 359 QARRADIRFKPKGGKAA-FVHTLNGSGLPTGRAIAAILENGQQRDGSVRLPKALVPYMDG 417 Query: 420 LAVIKK 425 + I+ Sbjct: 418 VEAIEP 423 >gi|157151414|ref|YP_001450960.1| seryl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|189083593|sp|A8AYV0|SYS_STRGC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157076208|gb|ABV10891.1| seryl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 425 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 200/428 (46%), Positives = 280/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDTVAAKLATRGVDAATLNQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDATLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|325688711|gb|EGD30720.1| serine--tRNA ligase [Streptococcus sanguinis SK115] Length = 425 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 201/428 (46%), Positives = 281/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAEKLATRGVDAATLNQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDATLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++SK LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDSKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|109898771|ref|YP_662026.1| seryl-tRNA synthetase [Pseudoalteromonas atlantica T6c] gi|123360697|sp|Q15T16|SYS_PSEA6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|109701052|gb|ABG40972.1| seryl-tRNA synthetase [Pseudoalteromonas atlantica T6c] Length = 432 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 191/430 (44%), Positives = 264/430 (61%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R + L+KR +L+EK + L + ++++ RN S IG+ Sbjct: 1 MLDAKYLRNDINIAAQKLEKRGYTLDVAQFTALEEKRKSLQMRTQELQNERNVRSKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L + L ++L + E + ++ L IPN+P + VP G + Sbjct: 61 AKASGQ--DIEPLLAQVGQLGDELNAAKAELTGLLDEIQTLTLNIPNLPDDSVPEGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGE-ALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + G ++H ++G +DF+ ATKL+G+RF V+ G +A L RA+ Sbjct: 119 ENVEVSRWGTPREFDFEVKDHVDLGAGVANGLDFETATKLTGSRFVVMRGQIARLNRAIA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSE 233 QFM+DLHT +HGY E+ P LV +E+M GTGQ PKF D F T LIPTSE Sbjct: 179 QFMLDLHTEQHGYQEMYVPYLVNEESMLGTGQFPKFVGDAFHTKPATEEGQGLSLIPTSE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTN+ I + LP++ T P FRSEAGS GRDTRG++RQHQF K E+V + + Sbjct: 239 VPLTNIARDCIFAANELPIKMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQLVEAD 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 SF + + AE++L+ L+L YR + LCTGD+GF ACKT+DLEVWL Q+ YREISSC Sbjct: 299 KSFEALDELTGNAEKVLQLLELPYRKMLLCTGDMGFGACKTFDLEVWLPAQDTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +RYRDP + + HTLNGSG+AVGR L+AILENY ADGS+TIP VL Sbjct: 359 SNMLDFQARRMQARYRDPQTNKTELLHTLNGSGLAVGRTLVAILENYQQADGSITIPEVL 418 Query: 414 RPYMNNLAVI 423 +PYMN + VI Sbjct: 419 QPYMNGVTVI 428 >gi|188584655|ref|YP_001916200.1| seryl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] gi|229890228|sp|B2A2Z8|SYS_NATTJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|179349342|gb|ACB83612.1| seryl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 422 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 189/424 (44%), Positives = 265/424 (62%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR NP+ A ++ + + IL DE+ R ++ +E ++ +RN+ S +IGQ Sbjct: 1 MLDVKYIRNNPDEARKACVQKGEDDHVDEILKYDEQRRKILTDLEVLKNKRNTVSKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG+ E + +++ ++ E +V L + CIPN+P +VP+G Sbjct: 61 LKKEGH--DAQDKIAEMKEVSDKVKEMDDELKKVDEQLNYHLLCIPNIPNPDVPVGDDDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +++ VG +P + H+E+ E L L+DF RA K++G RF G A LERAL Sbjct: 119 DNQVVKQVG-EPVKKDYFKPHWEVAENLNLLDFKRAGKVTGTRFVNYVGDAARLERALID 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FMID+H +EHGY E+ P + ++M GTGQ+PKF DDM+ D + IPT+EV+LTNL Sbjct: 178 FMIDVHVTEHGYVEMMPPFIANRDSMTGTGQLPKFEDDMYKLEDMEYFLIPTAEVTLTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+ LP P FR EAG+ GRDTRG++RQHQF K E+V E S+ E Sbjct: 238 YRDEILPGDFLPRYLVAFTPCFRKEAGAHGRDTRGLIRQHQFNKVEMVKFVEPEKSYQEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + +++ AE +L+ L+L Y++ +CTGDLGF+A K YDLEVWL + YREISSCS +F Sbjct: 298 DSLVANAERVLQLLELPYQISLMCTGDLGFAAAKKYDLEVWLPSYDTYREISSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYR + +F HTLNGSG+AVGR L AILENY N DG+VTIP VL+PY N Sbjct: 358 QARRANIRYRPEEGEKARFVHTLNGSGLAVGRTLAAILENYQNPDGTVTIPEVLKPYFNG 417 Query: 420 LAVI 423 VI Sbjct: 418 RDVI 421 >gi|331270693|ref|YP_004397185.1| serine--tRNA ligase [Clostridium botulinum BKT015925] gi|329127243|gb|AEB77188.1| serine--tRNA ligase [Clostridium botulinum BKT015925] Length = 426 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 191/428 (44%), Positives = 278/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR NPE + ++ R + + ++S DE+ R ++ ++E ++++RNS S+Q Sbjct: 1 MLDLKRIRNNPEEIKNIMQNRGEDFDNKLIDDVVSFDERRRQILVEVEKLKSKRNSESSQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ EG + + E L +++ + E +EV +K ++ IPN+P VP G Sbjct: 61 IGKLKKEGKDT--SGVMAEMKKLSDEIKAFDVELNEVDEKIKYIMLRIPNIPNPNVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ IR G+ S+ H++IG LG++DF+R K++G+RF++ G A LERA Sbjct: 119 SDEDNVEIRKWGEATKFDFQSKAHWDIGVDLGILDFERGGKIAGSRFTIYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D+HT +HGYTE+ P +V E+M GTGQ+PKF +D F + + IPT+EV + Sbjct: 179 IINYFLDMHTIDHGYTEILPPYMVNRESMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y +EI+ + LP++ + FR+EAGSAGRDTRG++RQHQF K ELV + E S+ Sbjct: 239 TNMYRNEILNGEELPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKVELVKFVKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE++LK L L YRVV +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 DELEKLTNDAEDVLKGLGLPYRVVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY+D +F HTLNGSGVA+GR + AILENY N DG+VTIP LRPY Sbjct: 359 EDFQARRANIRYKDNQKSKPEFIHTLNGSGVAIGRTVAAILENYQNEDGTVTIPEALRPY 418 Query: 417 MNNLAVIK 424 M NL IK Sbjct: 419 MRNLEFIK 426 >gi|256822347|ref|YP_003146310.1| seryl-tRNA synthetase [Kangiella koreensis DSM 16069] gi|256795886|gb|ACV26542.1| seryl-tRNA synthetase [Kangiella koreensis DSM 16069] Length = 422 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 195/422 (46%), Positives = 272/422 (64%), Gaps = 8/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + + L KR E E L+E+ + + + ++++ RNS+S IGQ Sbjct: 1 MLDPKLLRTDIDAVAKNLAKRGFELDVEQYNKLEEERKAIQVETQELQNERNSSSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L ++ + L +L ++ ++V + L ++ IPN+ E VP G N Sbjct: 61 AKARG--EDIQPLLDQVANLGSKLDAAKERLNQVMTQLDEIHYGIPNLLDESVPEGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ ++H E+GE L +DF A K++ +RF V G +A L RAL Q Sbjct: 119 DNVEIRRWGEPRQFDFEPKDHVEVGEGLSGLDFASAAKIAASRFIVKKGLVAKLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------DGRWLIPTSEV 234 FM+DLH+ EHGY EV P +V E++ GTGQ+PKF +D+F +LIPT+EV Sbjct: 179 FMLDLHSKEHGYEEVYVPYMVNAESLTGTGQLPKFEEDLFKAQGKNQDDRPLYLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL EIIE+ LPL+F P FRSEAGS GRD RG++R HQF K ELV I + ED Sbjct: 239 PVTNLVRDEIIEADQLPLQFVAHTPCFRSEAGSYGRDVRGLIRLHQFEKVELVHIAKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S ER++ AE++L+ L+L YRVV+LC+GD+GF A KTYD+EVWL Q+ YREISSCS Sbjct: 299 SMEALERLIGHAEKVLQLLELPYRVVTLCSGDIGFGATKTYDIEVWLPSQDTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 G+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+AILENY NADGS+ IP VL+ Sbjct: 359 NTGDFQARRMQARWRNPETGKPELLHTLNGSGLAVGRTLVAILENYQNADGSINIPEVLK 418 Query: 415 PY 416 PY Sbjct: 419 PY 420 >gi|291482383|dbj|BAI83458.1| seryl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] Length = 444 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 191/427 (44%), Positives = 273/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD + +R N + + L + + + +LD++ R LI K+E+++ +RN S Q+ Sbjct: 20 MLDTKMLRANFQEIKAKLVHKGEDLTDFDKFEALDDRRRELIGKVEELKGKRNEVSQQVA 79 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D + E + E++ L++E V + L ++ IPN+P E VP+G + Sbjct: 80 VLKREKK--EADHIIKEMREVGEEIKKLDEELRTVEAELDTILLSIPNIPHESVPVGETE 137 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+KPS + + H++I + LG++DF+RA K++G+RF G A LERAL Sbjct: 138 DDNVEVRKWGEKPSFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLERALY 197 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH E+ YTEV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 198 NFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITN 257 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ SLP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 258 MHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 317 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ Q+ YREISSCS Sbjct: 318 LEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEA 377 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+AVGR + AILENY DGSV IP VLRPYM Sbjct: 378 FQARRANIRFRREAKGKPEHVHTLNGSGLAVGRTVAAILENYQQEDGSVVIPKVLRPYMG 437 Query: 419 NLAVIKK 425 N V+K Sbjct: 438 NREVMKP 444 >gi|116874111|ref|YP_850892.1| seryl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466700|sp|A0AM81|SYS_LISW6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116742989|emb|CAK22113.1| seryl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 427 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 182/426 (42%), Positives = 270/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N E + L+ R + + E LD++ R LI + E ++++RN S +I Sbjct: 1 MLDVKLLRNNFEEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E P+G S Sbjct: 61 KLKREKQDADAK--IEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNIPHESTPVGESE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + + H+++G L ++DF+ A K++G+RF A LERAL Sbjct: 119 DDNVEIRKWGEVRTFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYEA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ S AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ + YREISSCS + Sbjct: 299 LEKLTSNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYDSYREISSCSNFES 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY +ADGSV IP VL+ YM Sbjct: 359 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDADGSVRIPKVLQGYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GIEKIE 424 >gi|328958771|ref|YP_004376157.1| serine--tRNA ligase [Carnobacterium sp. 17-4] gi|328675095|gb|AEB31141.1| serine--tRNA ligase [Carnobacterium sp. 17-4] Length = 427 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 192/427 (44%), Positives = 274/427 (64%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R + + L+ R ++ + E ++LD + R LI E++++ RN S I Sbjct: 1 MLDIKQLRLDFDATAKKLEARGVKHELLEEFITLDSERRSLIVTTEELKSYRNEVSGAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 D E + E++ L+++ + ++ + + +PN+P + VP+G Sbjct: 61 MLKRS--KENADEKIKEMRDVGEKIKDLDEQLAAIDEKIETIATGLPNLPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G ++ H+E+ E L ++DF+R K+SG+RF G A LERA+ Sbjct: 119 ADNVEVRKWGTPVEVAFEAKAHWEVAEELDILDFERGAKVSGSRFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+DLHT EHGYTE+ P LV ++M+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDLHTGEHGYTEMMTPYLVNSDSMFGTGQFPKFKEDVFQIEGTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EI++ + LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 239 YYRNEILKEEQLPVYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSKPETSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE +L++L+L YRV++LCTGD+GFSA KTYDLEVW+ Q YREISSCS Sbjct: 299 LEKMTNNAEAVLQKLNLPYRVLALCTGDMGFSAAKTYDLEVWIPAQETYREISSCSNTEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR+ + L++ HTLNGSG+AVGR + AILENY ADGSV IP VL PYM Sbjct: 359 FQARRAKIRYRNEETGKLEYVHTLNGSGLAVGRTIAAILENYQQADGSVKIPDVLVPYMG 418 Query: 419 NLAVIKK 425 + I+K Sbjct: 419 GVTEIRK 425 >gi|16801950|ref|NP_472218.1| seryl-tRNA synthetase [Listeria innocua Clip11262] gi|30173196|sp|Q926Z9|SYS_LISIN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|16415425|emb|CAC98116.1| seryl-trna synthetase [Listeria innocua Clip11262] Length = 427 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 182/426 (42%), Positives = 268/426 (62%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N E + L+ R + + E LD++ R LI + E ++++RN S +I Sbjct: 1 MLDVKLLRNNFEEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E P+G S Sbjct: 61 KLKREKQDADAK--IEEMRVVGDRIKTLDIELREIDEKLDTILMSIPNIPHESTPVGESE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + H+++G L ++DF+ A K++G+RF A LERAL Sbjct: 119 DDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ CAEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ + YREISSCS + Sbjct: 299 LEKLTGCAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYDSYREISSCSNFES 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY ADGSV IP VL+ YM Sbjct: 359 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQEADGSVLIPKVLQGYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GIEKIE 424 >gi|297582352|ref|YP_003698132.1| seryl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297140809|gb|ADH97566.1| seryl-tRNA synthetase [Bacillus selenitireducens MLS10] Length = 424 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 179/425 (42%), Positives = 274/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R + E + L R+ + + LDE+ R +I+K+E+++ +RN+ S +I Sbjct: 1 MLDMKRLRADFEGVREKLATRNEDISALDDFQKLDEERRQVIQKVEELKGKRNTVSEEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + E + ++ L++++ +V +K L+ IPN+P E P+G Sbjct: 61 KMKR--NKEDASDVIAEMKDVSAEIKALDEKQRDVDEKMKTLMLSIPNIPHESAPVGLDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN IR+ G++P+ + H+++ ++DF+RA+K++G+RF++ G A LERAL Sbjct: 119 TENEEIRTWGERPAFDFEGKAHWDLAVTHDIVDFERASKITGSRFAIYKGAGARLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H +HGYTEV P +V ++M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMMDFHEDKHGYTEVLPPYMVNRDSMTGTGQLPKFEEDAFQIREEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + LP+ ++ + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILTADELPIAYSAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPEDSYAE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE+IL++L+L YRV+++CTGDLGF+A K YD+EVWL Y+EISSCS + Sbjct: 299 LEKLTGHAEKILQQLNLPYRVLNMCTGDLGFTAAKKYDIEVWLPSYGEYKEISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ +F HTLNGSG+A+GR + AILENY ADG++ IP VL+PYM Sbjct: 359 FQARRANIRFKRDQKGKAEFVHTLNGSGLAIGRTVAAILENYQQADGTIKIPKVLQPYMG 418 Query: 419 NLAVI 423 I Sbjct: 419 GKTRI 423 >gi|114771849|ref|ZP_01449242.1| seryl-tRNA synthetase [alpha proteobacterium HTCC2255] gi|114547665|gb|EAU50556.1| seryl-tRNA synthetase [alpha proteobacterium HTCC2255] Length = 430 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 216/430 (50%), Positives = 293/430 (68%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR +P D ALK+R E S IL +D R I E A RN+ S +G Sbjct: 1 MHDIRTIRDDPNKFDAALKRRGAEAISSVILDIDLDRRAKITSAEAALAERNTASKMVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+N S K ++ LE+ E+ + L+ L+ IPN+P ++VP G+ N Sbjct: 61 AKASGDETEFNRLRNLVSEKKAEIASLEESAKEIDNKLRNLLLTIPNLPYDDVPTGSDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ P+ + EH++I MDF+ A K+SG+RF +L+G +A + RAL Q Sbjct: 121 DNVEVHKWGELPAFEFDALEHYDIKSVSKGMDFETAAKMSGSRFVILSGAIARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D HT+E+G TEV+ P+LVRDEAM+GTGQ+PKF++D + T++G WL+PTSEV+LTN+ Sbjct: 181 FMLDTHTTENGLTEVNTPVLVRDEAMFGTGQLPKFSEDSYQTSNGWWLVPTSEVTLTNIA 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +LP RFT + FRSEAGSAGRDT GMLRQHQF K E+VSI + EDS E + Sbjct: 241 ADTTTTEDNLPRRFTAHSLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSIVKPEDSDLELD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CA+ IL++L+L YR V LCTGD+GFSA +T D+EVWL GQN YREISSCSTCG+FQ Sbjct: 301 RMTKCAQGILEKLELPYRTVKLCTGDMGFSAKRTNDIEVWLPGQNAYREISSCSTCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 SRRMN+R++ +K +F HTLNGSG+AVGRCLIA+LEN DGSV +P VL ++ Sbjct: 361 SRRMNARFKRTGAKKPEFVHTLNGSGLAVGRCLIAVLENGQQEDGSVILPKVLTQHLGGK 420 Query: 421 AVIKKEHILE 430 + + ILE Sbjct: 421 TRLNTKGILE 430 >gi|317133698|ref|YP_004093012.1| seryl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315471677|gb|ADU28281.1| seryl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 429 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 186/425 (43%), Positives = 257/425 (60%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR +PE + ++ RH E + +L LD+ R LI + ++ +N +S QI Sbjct: 1 MLDIKEIRNDPERVKKGMRVRHKEIDIDAVLRLDDLRRSLILSTDAEKSEQNQSSKQIPV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG AL L + + + + E +L+ + IPNVP E VP G + Sbjct: 61 LKKEGKQEEAQALLARMKELSDDIKENDAKLRETEEALRAQLLSIPNVPHESVPEGQDDS 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ R G + H++IG LG++D +RA K++GARF G A LERA+ Sbjct: 121 ENVEKRRFGTPRDFGFEPQAHWDIGAKLGILDPERAAKVTGARFHFYKGLGARLERAVIN 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 + ++ HT +GYTE+ P LV +M GTGQ+PKF DD F + +LIPT+EV +TN Sbjct: 181 YFLNTHT-ANGYTEILPPFLVNRASMTGTGQLPKFEDDAFHIDKEDLFLIPTAEVPVTNF 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ LP+++ + FR EAGSAGRDTRG++RQHQF K ELV R EDS+ E Sbjct: 240 HRDEILDGAQLPIKYCAYSACFREEAGSAGRDTRGLIRQHQFNKVELVKFVRPEDSYEEL 299 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AE +L+ L L Y VV+LC GDLGFS+ KTYD+EVW+ Y EISSCS ++ Sbjct: 300 EKLTGDAERVLQGLGLPYHVVTLCAGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFEDY 359 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R++D +F HTLNGSGVA+GR + AILENY N DGSVT+P VLR M Sbjct: 360 QARRASIRFKDGARDKTRFVHTLNGSGVAIGRTVAAILENYQNEDGSVTVPEVLRGLM-G 418 Query: 420 LAVIK 424 + VI Sbjct: 419 VDVIP 423 >gi|319426384|gb|ADV54458.1| seryl-tRNA synthetase [Shewanella putrefaciens 200] Length = 428 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 200/429 (46%), Positives = 262/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R L R ++ L+EK + L E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRNELAVTVERLATRGFILDVAHLTQLEEKRKSLQVATEELQAARNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G VD++ + L QL + E V + + +PN+P E PIG Sbjct: 61 AKARG--EDVDSIMAQVGDLGSQLDAKKLELAAVLEEVNAIAMSMPNLPDESAPIGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G S ++H ++GE L +DF A K++G+RF V+ G +A L RALGQ Sbjct: 119 QNVEVRRWGTPRSFDFPIKDHIDLGEGLNGLDFKSAVKITGSRFIVMKGQIARLNRALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT+EHGYTE PLLV + ++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I++ LP++ T FRSEAGS G+DTRG++RQHQF K ELV + + ED Sbjct: 239 PLTNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + + AE +L+RL L YR V LCTGD+GF + KTYD+EVWL GQN YREISSCS Sbjct: 299 SMAALETLTNHAETVLQRLGLPYRTVVLCTGDMGFGSSKTYDIEVWLPGQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR HTLNGSG+AVGR L+AILENY NADGSVTIP LR Sbjct: 359 NMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSVTIPEALR 418 Query: 415 PYMNNLAVI 423 YM L I Sbjct: 419 SYMGGLTQI 427 >gi|256618437|ref|ZP_05475283.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256761947|ref|ZP_05502527.1| seryl-tRNA synthetase [Enterococcus faecalis T3] gi|257084092|ref|ZP_05578453.1| seryl-tRNA synthetase [Enterococcus faecalis Fly1] gi|257088576|ref|ZP_05582937.1| seryl-tRNA synthetase [Enterococcus faecalis CH188] gi|300862206|ref|ZP_07108286.1| serine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|307276339|ref|ZP_07557465.1| seryl-tRNA synthetase [Enterococcus faecalis TX2134] gi|312903849|ref|ZP_07763021.1| seryl-tRNA synthetase [Enterococcus faecalis TX0635] gi|256597964|gb|EEU17140.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256683198|gb|EEU22893.1| seryl-tRNA synthetase [Enterococcus faecalis T3] gi|256992122|gb|EEU79424.1| seryl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256997388|gb|EEU83908.1| seryl-tRNA synthetase [Enterococcus faecalis CH188] gi|295112414|emb|CBL31051.1| seryl-tRNA synthetase [Enterococcus sp. 7L76] gi|300848731|gb|EFK76488.1| serine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|306507004|gb|EFM76148.1| seryl-tRNA synthetase [Enterococcus faecalis TX2134] gi|310632793|gb|EFQ16076.1| seryl-tRNA synthetase [Enterococcus faecalis TX0635] gi|315143211|gb|EFT87227.1| seryl-tRNA synthetase [Enterococcus faecalis TX2141] gi|315160827|gb|EFU04844.1| seryl-tRNA synthetase [Enterococcus faecalis TX0645] gi|315171391|gb|EFU15408.1| seryl-tRNA synthetase [Enterococcus faecalis TX1342] gi|315577010|gb|EFU89201.1| seryl-tRNA synthetase [Enterococcus faecalis TX0630] Length = 423 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 205/425 (48%), Positives = 277/425 (65%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN E + LK R ++ + L+LDE+ R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEERRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R + + H+EIGEALG++DF+R K+SG+RF G A LERA+ Sbjct: 119 AANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H +EHGYTEV P LV +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI+E++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILEAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM Sbjct: 359 FQARRALIRYRDKTG-HVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|322391061|ref|ZP_08064565.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 903] gi|321142291|gb|EFX37765.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 903] Length = 446 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 277/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E+++A RN+ SA+I Sbjct: 22 MLDIKRIRTDFDAVAKKLATRGVDAAILNEMKEIDAKRRDILVKVENLKAERNTVSAEIA 81 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 82 QAKR--NKENADDKIAAMQTLSAEVKALDTELAEIDAKLTEFTTTLPNIPADSVPVGADE 139 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 140 DDNVEVRRWGTPREFGFEPKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 199 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM++ H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 200 NFMLEEH-GKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELSDTNYVLIPTAEVPLTN 258 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 259 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYDE 318 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 319 LEKMVVNAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 378 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 379 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 438 Query: 419 NLAVIKKE 426 VI + Sbjct: 439 GAEVIAPK 446 >gi|225869128|ref|YP_002745076.1| seryl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] gi|259511681|sp|C0ME07|SYS_STRS7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|225702404|emb|CAX00264.1| seryl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] Length = 425 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 272/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR N + + LK R + + +LDE+ R L+ + E+++A+RN SA I Sbjct: 1 MLDLKRIRTNFDAVAAKLKTRGVSEDTLTTLKALDEQRRALLVQTEELKAQRNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + L + ++ + ++ + +I+ +PN P + VPIG Sbjct: 61 QAKRQKK--DASQQIADMQQLAANIKAIDAKLADIDQEITSIITVLPNTPHDSVPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR GK + H+++GEAL ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGKPRQFDFDIKAHWDLGEALDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F ++ IPT+EV LTN Sbjct: 179 NFMLDEHLKE-GYQEIIPPYMVNHDSMFGTGQYPKFKEDTFELDGTSFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +II+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 238 YYRGDIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPETSYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLELPYRVLALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L +IK Sbjct: 418 GLELIKPR 425 >gi|16077081|ref|NP_387894.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221307822|ref|ZP_03589669.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221312144|ref|ZP_03593949.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317077|ref|ZP_03598371.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221321340|ref|ZP_03602634.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|586064|sp|P37464|SYS_BACSU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|467403|dbj|BAA05249.1| seryl-tRNA synthetase [Bacillus subtilis] gi|2632280|emb|CAB11789.1| seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 425 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 191/427 (44%), Positives = 273/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD + +R N + + L + + + +LD++ R LI K+E+++ +RN S Q+ Sbjct: 1 MLDTKMLRANFQEIKAKLVHKGEDLTDFDKFEALDDRRRELIGKVEELKGKRNEVSQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E D + E + E++ L++E V + L ++ IPN+P E VP+G + Sbjct: 61 VLKREKK--DADHIIKEMREVGEEIKKLDEELRTVEAELDTILLSIPNIPHESVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G+KPS + + H++I + LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVEVRKWGEKPSFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH E+ YTEV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMLDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPTAEVPITN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ SLP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 MHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ Q+ YREISSCS Sbjct: 299 LEKLTNQAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQDTYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + HTLNGSG+AVGR + AILENY DGSV IP VLRPYM Sbjct: 359 FQARRANIRFRREAKGKPEHVHTLNGSGLAVGRTVAAILENYQQEDGSVVIPKVLRPYMG 418 Query: 419 NLAVIKK 425 N V+K Sbjct: 419 NREVMKP 425 >gi|56807927|ref|ZP_00365750.1| COG0172: Seryl-tRNA synthetase [Streptococcus pyogenes M49 591] gi|209559859|ref|YP_002286331.1| seryl-tRNA synthetase [Streptococcus pyogenes NZ131] gi|238065107|sp|B5XHX4|SYS_STRPZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|209541060|gb|ACI61636.1| Seryl-tRNA synthetase [Streptococcus pyogenes NZ131] Length = 425 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 269/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LKKR + ++ LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDTVAAKLKKRGVSEDTLTHLKELDEKRRALLVQSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + + + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDATQQIADMQKVSADIKTIDNQLVAIDQQVTDIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV+SLCTGD+GFSA KTYD+EVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDVEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|322373920|ref|ZP_08048455.1| serine--tRNA ligase [Streptococcus sp. C150] gi|321277292|gb|EFX54362.1| serine--tRNA ligase [Streptococcus sp. C150] Length = 425 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 196/428 (45%), Positives = 269/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + L L R + + + LD K R L+ K E+++A+RN S I Sbjct: 1 MLDVKRIRNDFDALAEKLATRGVAAETLNELKELDVKRRELLIKSEELKAQRNVASDGIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + ++ ++ E + L ++ +PN P E VP+G Sbjct: 61 QAKR--NKEDASEQIAAMQKVSAEIKEIDAELAAIDEKLNSIVVTLPNTPHETVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPRDFDFEIKPHWDLGEDLGILDWERGAKVTGSRFLFYKGLGAKLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTE+ P +V ++M+GTGQ PKF +D F ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEMITPYMVNHDSMFGTGQYPKFKEDTFELDGTDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPESSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVVNAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVIAPK 425 >gi|323341530|ref|ZP_08081769.1| serine--tRNA ligase [Lactobacillus ruminis ATCC 25644] gi|323091051|gb|EFZ33684.1| serine--tRNA ligase [Lactobacillus ruminis ATCC 25644] Length = 424 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 275/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQN + + L R ++ + + +L D++ R L+ + E ++ +RN SA+I Sbjct: 1 MLDIKMIRQNTDEIKERLATRGVKAEKIDALLEKDKRRRELLVETEGLKQKRNEVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A N E + ++ L++E EV +++K + S +PN+P +P+G Sbjct: 61 NAKR--NKQDATDAIKEMREVGSKIKSLDEELEEVEATVKDMASRLPNLPNPTIPVGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ +R VG + H++IGE LG++DFDR K+SGARF G A LERA+ Sbjct: 119 SANVELRKVGTPREFDFEPKAHWDIGEDLGILDFDRGAKVSGARFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H E GYTE+ P +V + MYGTGQ PKF +D++ + LIPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEMLPPYIVNAQTMYGTGQFPKFKEDVYQVNGEDMTLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I ++ LP+ FT L P FRSEAGSAGRDTRG++R HQF K E+V ++ E+S+ E Sbjct: 238 YYRDEVIPTEKLPVYFTALTPCFRSEAGSAGRDTRGLIRMHQFNKVEMVKFSKPENSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M A I+++L L Y V++L TGD+GFSA T+DLEVW+ QN YREISSCS C + Sbjct: 298 LEKMTQNAGNIMEKLGLPYHVITLSTGDMGFSAAMTHDLEVWMPAQNKYREISSCSNCED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR + +YRD N K L F HTLNGSG+AVGR + AILENY N DGSVTIP LRPY+ Sbjct: 358 FQARRAHIQYRDENGK-LNFVHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYLG 416 Query: 419 NLAVIKKE 426 L I K+ Sbjct: 417 GLEKITKD 424 >gi|330815820|ref|YP_004359525.1| Seryl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327368213|gb|AEA59569.1| Seryl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 433 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 199/431 (46%), Positives = 272/431 (63%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R SL+ R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYILDVARFSSLEADRRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ E+ +++ L+ +PN+ E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKSSAARLDEIQGAMQALLLEMPNLAHESVPVGKDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ R G S R+H +IG LG +DF+ KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEARRWGTPRSFDFEVRDHVDIGTPLG-LDFETGAKLSGARFTMLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE +P +V E +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTLQHGYTETYSPYIVNPEILYGTGQLPKFADDMFRVEKGGEENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++LTN I+++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I + Sbjct: 238 ITLTNTVRDSIVDAAALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIAAPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL++L+L YRV++LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQKLELPYRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPVAL 416 Query: 414 RPYMNNLAVIK 424 RPY+ L I+ Sbjct: 417 RPYLGGLEKIE 427 >gi|254563567|ref|YP_003070662.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Methylobacterium extorquens DM4] gi|254270845|emb|CAX26850.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Methylobacterium extorquens DM4] Length = 428 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 234/428 (54%), Positives = 298/428 (69%), Gaps = 1/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NPE D L++R L P S +++LD+ + + + + RRN+ S +IG Sbjct: 1 MHDIRAIRENPEAFDRDLERRGLGPLSAELIALDDARKAAVSAAQAAQERRNALSKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E + LKE+ P LE + E +L + ++ IPN P ++VP G + Sbjct: 61 AKKAKDEARATELMAEVARLKEEAPGLEAAQGEAAKALDERLAAIPNRPKDDVPPGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ R + R+HFE+GEA GLMDF+ A KLSG+RF VL G LA LERALGQ Sbjct: 121 GNVEYRRFDSSRERLTQGRQHFELGEATGLMDFEAAAKLSGSRFVVLKGQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHGYTEV P+LVR+EAM+GT Q+PKF DD F + WLIPT+EV LTNL Sbjct: 181 FMLDLHTGEHGYTEVVPPVLVREEAMFGTAQLPKFRDDQFAAGENFWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I+ LPLRFT L P FR+EAG+AGRDTRGMLRQHQF K ELVSIT E S EHE Sbjct: 241 RESILAEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFNKVELVSITAPEKSAEEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML+CAE +L++LDL YRV++LCTGD+GF++ KTYD+EVW+ GQ YREISSCS CG FQ Sbjct: 301 RMLACAEAVLQKLDLTYRVMTLCTGDMGFASQKTYDIEVWVPGQQTYREISSCSVCGEFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + + F HTLNGSGVAVGR LIA++ENY N DGSVTIP+ L+PYM L Sbjct: 361 ARRMNARYRAKEGRGVGFVHTLNGSGVAVGRALIAVMENYQNPDGSVTIPSALQPYMGGL 420 Query: 421 AVIK-KEH 427 I+ ++ Sbjct: 421 TRIEGPKN 428 >gi|68248725|ref|YP_247837.1| seryl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|81336860|sp|Q4QP70|SYS_HAEI8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|68056924|gb|AAX87177.1| Seryl-tRNA synthetase [Haemophilus influenzae 86-028NP] Length = 429 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 192/431 (44%), Positives = 260/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKVRG--EDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPHTFDFEVKDHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVWL QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P LR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGGLDVIGK 429 >gi|154250193|ref|YP_001411018.1| seryl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|171769398|sp|A7HN78|SYS_FERNB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|154154129|gb|ABS61361.1| seryl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 426 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 196/427 (45%), Positives = 284/427 (66%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+H ALKKR+ + I++LD++ R + + +++A+RN S + Sbjct: 1 MIDLKLLRKDPQHFYEALKKRNYSTDIIDEIVNLDKEWRNQLNIVNNLKAKRNELSKLVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + AEG + + E+ + E++ E ++ E+ + L IPN P E VP+G Sbjct: 61 RYKAEGKNQEAEEIIAESKKIGEEIAQYEGKQKELEEKMYNLALYIPNPPHESVPVGKDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ IR G+ + H+++G LG++DFDR +KLSG+RF+V+ G +A LERA+ Sbjct: 121 TENVEIRRWGEPRKFDFEPKAHWDLGPELGMLDFDRGSKLSGSRFTVMFGAIAKLERAIA 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTN 238 QFM+D+HT ++GY EV+ P LV+ E + TGQ+PKF+++++ C D +LIPT+EVSL Sbjct: 181 QFMLDVHT-KNGYIEVNVPHLVKRETITATGQLPKFSEELYTCERDDLFLIPTAEVSLAA 239 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+E LP ++T P +R EAGS G+D RG++RQHQF K ELV T E SF + Sbjct: 240 LHIDEILEENKLPKKYTAFTPCYRREAGSYGKDVRGLIRQHQFEKVELVWYTTPERSFED 299 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+ L L YRVV+LCTGDLGF+A KTYD+EVWL N Y+EISSCS + Sbjct: 300 LEQLTQDAERILQLLGLPYRVVTLCTGDLGFAAAKTYDIEVWLPSYNSYKEISSCSNVTD 359 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR + K L + HTLNGSG+A+GR L+AI+ENY N DG++TIP VLRPYM Sbjct: 360 FQARRGNIRYRAKDGK-LNYVHTLNGSGLAIGRTLVAIMENYQNPDGTITIPEVLRPYM- 417 Query: 419 NLAVIKK 425 +IK Sbjct: 418 GTDIIKP 424 >gi|169830232|ref|YP_001716214.1| seryl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|238688210|sp|B1I161|SYS_DESAP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|169637076|gb|ACA58582.1| seryl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 425 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 282/427 (66%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR++PE + +AL+KR E + +L LD++ R + +E ++ RRN+ S +I + Sbjct: 1 MLDLKFIRKHPEAVRMALEKRGAEFDLDRLLDLDDEWRQKLFTVERLKNRRNAVSEEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + L E + +Q+ L+ E +V +L+ L+ +PN+P VP G + Sbjct: 61 LKKAGEPA--EELIAEMRNVSQQIRELDGEIRQVEENLQALLLQVPNIPHPLVPFGRADT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G+ P+ R H+E+GE L ++DF R K+SGARFS G A LERAL Sbjct: 119 DNEEVRRWGEPPAFGFEPRPHWELGEELNILDFARGGKVSGARFSFCRGAGARLERALIC 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 FM+DLH HGYTE+ P LV ++M GTGQ+PKFA DM+ + +L+PT+EV +TN Sbjct: 179 FMLDLHVDRHGYTELFPPFLVNAQSMTGTGQLPKFAADMYKVENEDYYLVPTAEVPVTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 EI++ +LP ++ + FR+EAG+AGRDTRG++RQHQF K ELV TR EDS E Sbjct: 239 LRDEILDGDTLPRKYAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPEDSEDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+++ AEE+L+ L L YRVV LCTGDLGFS+ +TYDLEVW+ GQ +YREISSCS +F Sbjct: 299 EKLVRDAEEVLRLLRLPYRVVLLCTGDLGFSSSRTYDLEVWMPGQGVYREISSCSNFTDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYR F HTLNGSG+AVGR L A+LEN+ ADG+VT+P VLRPYM Sbjct: 359 QARRANIRYRAHPRAKADFVHTLNGSGLAVGRTLAAVLENFQQADGTVTVPEVLRPYMGG 418 Query: 420 LAVIKKE 426 + I ++ Sbjct: 419 MERITRK 425 >gi|114707229|ref|ZP_01440127.1| seryl-tRNA synthetase [Fulvimarina pelagi HTCC2506] gi|114537425|gb|EAU40551.1| seryl-tRNA synthetase [Fulvimarina pelagi HTCC2506] Length = 473 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 245/469 (52%), Positives = 312/469 (66%), Gaps = 46/469 (9%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DI+WIR NP LD ALK R P + ++ LDEK R +K ++D++ARRN S IG+ Sbjct: 1 MIDIRWIRDNPNKLDEALKARGAGPAAIDLIKLDEKRRDHLKILQDLQARRNEASKAIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ + + L E + +K QL E EE + ++L+ +S +PNVPLE+VP+G Sbjct: 61 AKGSGDDAKAEELIGEVAKIKSQLQAGEAEERRIDAALRDGLSRLPNVPLEDVPVGADEG 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R VG+KPS +EH+E+GEALGLMDF+ A K+SG+RF+VL G LA LERALGQ Sbjct: 121 DNAELRKVGEKPSFAFKPKEHYELGEALGLMDFELAGKISGSRFNVLRGELARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-------------------- 220 FM+DLHT EHGY EV P+LVR++AMYGT Q+PKF +D+F Sbjct: 181 FMLDLHTGEHGYEEVQPPVLVRNDAMYGTSQLPKFGEDLFIGASMTGRAQQTDDVLAQYT 240 Query: 221 --------------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 T + WLIPT+EV LTNL E + +++LP R Sbjct: 241 RPEDIERLKSGEIEVRELVANAFEDAPTEEQFWLIPTAEVPLTNLVREETLSAEALPRRM 300 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 T L P FRSEAGSAGRDTRGMLRQHQF K ELVSIT E+ S E ERM +CAEE+LKRL Sbjct: 301 TALTPCFRSEAGSAGRDTRGMLRQHQFNKVELVSITDEQSSLAELERMTACAEEVLKRLG 360 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK 374 L YRVV+LCTGD+GF+A KTYD+EVWL GQ+ YREISSCS CG+FQ+RRMN+RY+ K Sbjct: 361 LPYRVVTLCTGDMGFAARKTYDIEVWLPGQDTYREISSCSVCGDFQARRMNARYKAEGEK 420 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 +F HTLNGSGVAVGR LIA++ENY DGS+ +P VL+PY+ + I Sbjct: 421 QQRFVHTLNGSGVAVGRALIAVMENYQQEDGSILVPDVLKPYIGGVERI 469 >gi|323350377|ref|ZP_08086041.1| serine--tRNA ligase [Streptococcus sanguinis VMC66] gi|322123450|gb|EFX95126.1| serine--tRNA ligase [Streptococcus sanguinis VMC66] Length = 425 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 200/428 (46%), Positives = 279/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + +D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAEKLATRGVDAATLNQMKIIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDATLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|254512184|ref|ZP_05124251.1| seryl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] gi|221535895|gb|EEE38883.1| seryl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] Length = 430 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 196/429 (45%), Positives = 280/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R P S +L LDE R I E +A +N S ++G Sbjct: 1 MHDIRAIRENPAAFDAALARRGDAPMSSELLRLDESRRAKILAAETAQAEQNKASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ + + L+ + K ++ ++ E ++ + L ++ I N+P ++VP G+ + Sbjct: 61 AKGRGDEAEFERLRALVAEKKAEIARMQTEAKDLDALLTDQLARIANLPADDVPEGSDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G + +EH+EI MDF+ A K SG+RF L+ +A + RAL Q Sbjct: 121 DNVEVTRWGAPRNFSFTPKEHYEIPAVAAAMDFETAAKTSGSRFVNLSKGVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H ++G TE+ P+LVRDEAMYGT ++PKF +D + TT+G WLIPTSEV+LT Sbjct: 181 FMLDTHIDKNGLTEMQTPVLVRDEAMYGTDKLPKFGEDSYQTTNGWWLIPTSEVTLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I++ +LP+R T FRSEAGSAG+DT GMLRQHQF K E+VS+T ++S E + Sbjct: 241 AGDILDEAALPIRMTAHTACFRSEAGSAGKDTAGMLRQHQFEKVEMVSVTHPDNSDAEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE++L++L + YR V LCTGD+GF A +T+D+E WL GQ+ YREISS ST G FQ Sbjct: 301 RMLRCAEDLLEQLGIPYRTVVLCTGDMGFGARRTFDIEAWLPGQDAYREISSVSTTGAFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R ++ HTLNGSG+AVGRCLIA+LEN NADG+VT+P VL PY+ Sbjct: 361 ARRMNARFRPEGGGKPEYVHTLNGSGLAVGRCLIAVLENGQNADGTVTLPDVLAPYLGGK 420 Query: 421 AVIKKEHIL 429 ++ + L Sbjct: 421 LTLQADGTL 429 >gi|306828941|ref|ZP_07462133.1| serine--tRNA ligase [Streptococcus mitis ATCC 6249] gi|304429119|gb|EFM32207.1| serine--tRNA ligase [Streptococcus mitis ATCC 6249] Length = 424 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 201/426 (47%), Positives = 276/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDAAVLNEMKEIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E ++ + L + + +PN+P + VPIG Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELADIDAKLTEFTTTLPNIPADSVPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELKDTNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY NADGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNADGSVTIPEALRPYMG 417 Query: 419 NLAVIK 424 VIK Sbjct: 418 GAEVIK 423 >gi|253756218|ref|YP_003029358.1| seryl-tRNA synthetase [Streptococcus suis BM407] gi|251818682|emb|CAZ56517.1| seryl-tRNA synthetase [Streptococcus suis BM407] Length = 424 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 270/427 (63%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + I LD K R ++ +E+++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDGVAAKLATRGVAAETLANIKELDAKRREILVTVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L + L+ + E+ L +I+ +PN P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSADVKNLDAQLLEIDEELNAIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EENVEVRRWGTPREFTFEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H +E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIAE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EI+E K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V E S+ E Sbjct: 238 YYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV++LCTGD+G+SA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVLALCTGDMGYSAAKTYDLEVWIPAQNAYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDAADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 + VIK Sbjct: 418 GVEVIKP 424 >gi|186475408|ref|YP_001856878.1| seryl-tRNA synthetase [Burkholderia phymatum STM815] gi|238691271|sp|B2JEF5|SYS_BURP8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|184191867|gb|ACC69832.1| seryl-tRNA synthetase [Burkholderia phymatum STM815] Length = 432 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 194/433 (44%), Positives = 273/433 (63%), Gaps = 11/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++A+RNS S QIG Sbjct: 1 MLDIQLLRKDIDGVAKRLADRGYILDVAAFSALEAERRAIQTRTEELQAKRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + ++ L L+ +PN+ E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKASAVQLEDIQKRLSDLLLGVPNLAHESVPVGNDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G ++H ++G LG +DF+ KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPRQFDFEIKDHVDVGTPLG-LDFETGAKLSGARFTLLRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTEV P +V E ++GTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQQHGYTEVYTPYIVNPEILFGTGQLPKFADDMFRVEKGGGENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I++S LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I + Sbjct: 238 ISLTNTVRDSIVDSNELPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVSPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E+M++ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSC Sbjct: 298 TSYDALEQMVAHAEVILQKLELPYRVITLCTGDMGFSAAKTYDLEVWVPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LEN+ NADGSVT+P L Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENFQNADGSVTVPAAL 416 Query: 414 RPYMNNLAVIKKE 426 RPY+ + ++ + Sbjct: 417 RPYLGGVDRLEVK 429 >gi|328944998|gb|EGG39155.1| serine--tRNA ligase [Streptococcus sanguinis SK1087] Length = 425 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 280/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAKKLATRGVDAATLNQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDATLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L +I + Sbjct: 418 GLEIIAPK 425 >gi|125718717|ref|YP_001035850.1| seryl-tRNA synthetase [Streptococcus sanguinis SK36] gi|166223300|sp|A3CQ45|SYS_STRSV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|125498634|gb|ABN45300.1| Seryl-tRNA synthetase, putative [Streptococcus sanguinis SK36] Length = 425 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 200/428 (46%), Positives = 280/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAEKLATRGVDAATLSQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENTDDKIAAMQKLSAEVKNLDASLAELDAKLTEFTTTLPNIPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 NENVEVRRWGTPHQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|261403954|ref|YP_003240195.1| seryl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261280417|gb|ACX62388.1| seryl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 427 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 275/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R ++ ALK R LD + R L+++ E ++ RRN+ SA++ Sbjct: 1 MLDVKILRSEYSRVEEALKNRGKSLDLIADFPKLDARRRELLQESESLKNRRNTVSAEVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D L E + +Q+ +++E E+ +S+ +L IPN+P E VPIG S Sbjct: 61 KLKK--NRENADELILEMRQVSDQIKAMDEEVRELEASISELTLAIPNIPHESVPIGASE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ IR + + + H+EI + L ++DF+ K++G+RF+ G A LERAL Sbjct: 119 EENVEIRRWAEPKAFDFEPKAHWEIAQNLSILDFEAGAKVTGSRFTFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+DLH+ +HGY E+ P +V +++YGTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 SFMMDLHSDKHGYEEMLPPYIVNRDSLYGTGQLPKFEEDLFKISDTDYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ S+ LP + + FRSEAG+AGRDTRG++RQHQF K E+V I E SF E Sbjct: 239 YHREEILNSEDLPKYYVAYSSCFRSEAGAAGRDTRGLIRQHQFNKVEMVKIVHPETSFDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE +L+ L+L YRV++LCTGD+GF + KTYDLEVWL +YREISSCS G+ Sbjct: 299 LEKMTADAERVLQLLNLPYRVMTLCTGDMGFGSMKTYDLEVWLPESGVYREISSCSNIGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R +F HTLNGSG+AVGR + AILENY ADGSV IP VLRPYM Sbjct: 359 FQARRANIRFRPEPKSKPEFVHTLNGSGLAVGRTVAAILENYQQADGSVVIPEVLRPYMG 418 Query: 419 NLAVIK 424 N+++I+ Sbjct: 419 NVSIIE 424 >gi|241663731|ref|YP_002982091.1| seryl-tRNA synthetase [Ralstonia pickettii 12D] gi|240865758|gb|ACS63419.1| seryl-tRNA synthetase [Ralstonia pickettii 12D] Length = 438 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 201/440 (45%), Positives = 275/440 (62%), Gaps = 19/440 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + LK R +L+ + + + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDIDAVAARLKDRCYVLDVAGFAALEAERKAIQTRTEELQARRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + E S + ++L + V + L+ L+ IPN+P E VP G Sbjct: 61 LKGKG--EDASGVMAEVSGIGDELKASAAQLDVVQAKLQDLMLSIPNLPHESVPAGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H ++G ALG +DFD KLSGARF+VL G +A L RAL Q Sbjct: 119 QNVEVRREGTPRTFDFPVKDHVDLGAALG-LDFDAGAKLSGARFTVLKGQVARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------------G 225 FM+D HT EHGYTE P +V +M GTGQ+PKF +D+F Sbjct: 178 FMLDTHTLEHGYTEAYVPYIVNAASMRGTGQLPKFEEDLFRVPRKMGHSAEGEDGERVEN 237 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPT+EV LTNL EI+ + +LP+ F +P FRSEAGS G+DTRGM+RQHQF K E Sbjct: 238 FYLIPTAEVPLTNLVRDEIVAADALPMMFAAHSPCFRSEAGSYGKDTRGMIRQHQFDKVE 297 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I + + SF E M + AE IL++L+L +R V LCTGD+GF + KTYD+EVW+ QN Sbjct: 298 MVQIVQPQTSFDALEAMTNAAENILRKLELPFRTVVLCTGDMGFGSTKTYDIEVWIPAQN 357 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISSCS G+FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADG Sbjct: 358 TYREISSCSNMGDFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRALVAVLENYQNADG 416 Query: 406 SVTIPTVLRPYMNNLAVIKK 425 SVT+PTVLRPY+ V+K Sbjct: 417 SVTVPTVLRPYLGGQEVLKP 436 >gi|296877087|ref|ZP_06901128.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] gi|296431948|gb|EFH17754.1| serine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] Length = 446 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 277/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + L R ++ + +D K R ++ K+E+++A RN+ SA+I Sbjct: 22 MLDIKRIRTEFDTVAKKLATRGVDAAILNEMKEIDAKRRDILVKVENLKAERNTVSAEIA 81 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 82 QAKR--NKENADDKIAAMQTLSAEVKALDTELAEIDAKLTEFTTTLPNIPADSVPVGADE 139 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 140 DDNVEVRRWGTPREFGFEPKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 199 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 200 NFMLDEH-GKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELSDTNYVLIPTAEVPLTN 258 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V ++ E+S+ E Sbjct: 259 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPEESYDE 318 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 319 LEKMVVNAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 378 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 379 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 438 Query: 419 NLAVIKKE 426 VI + Sbjct: 439 GAEVIAPK 446 >gi|257417514|ref|ZP_05594508.1| seryl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257159342|gb|EEU89302.1| seryl-tRNA synthetase [Enterococcus faecalis ARO1/DG] Length = 423 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 205/425 (48%), Positives = 277/425 (65%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN E + LK R ++ + L+LDE+ R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEERRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R + + H+EIGEALG++DF+R K+SG+RF G A LERA+ Sbjct: 119 AANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGACLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H +EHGYTEV P LV +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI+E++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILEAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM Sbjct: 359 FQARRALIRYRDKTG-HVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|332359167|gb|EGJ36988.1| serine--tRNA ligase [Streptococcus sanguinis SK49] Length = 425 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 201/428 (46%), Positives = 279/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAEKLATRGVDAATLNQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDATLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE ILK+L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILKKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI Sbjct: 418 GLEVIAPR 425 >gi|210623920|ref|ZP_03294129.1| hypothetical protein CLOHIR_02081 [Clostridium hiranonis DSM 13275] gi|210153284|gb|EEA84290.1| hypothetical protein CLOHIR_02081 [Clostridium hiranonis DSM 13275] Length = 423 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 186/426 (43%), Positives = 271/426 (63%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + + A++ R E + +++LD++ R L+K++E ++ N S +I Sbjct: 1 MLDIKRIRENLDEIKQAMQIRGEKEFDLDAVVALDDQRRDLLKEVEVLKQELNVESKKIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q I EG V K L +++ ++ + EV L + IPNVP +VP G + Sbjct: 61 QLIKEGK--DVTEDKARLKELSDKIKGIDVQVKEVEDKLNYTLMRIPNVPHPDVPQGETD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G+ + H++IG LG++DF+RA K++G+RF++ G A LER+L Sbjct: 119 EDNVEVKKWGEPRKFDFEQKAHWDIGTDLGILDFERAGKITGSRFTLYKGLGARLERSLI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 F ++ HT++HGYTEV P + ++ GTGQ+PKF +DMF + +PT+EV +TN Sbjct: 179 NFFLNTHTADHGYTEVLPPFMANRDSFCGTGQLPKFEEDMFKLEGLEYFLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ +EI+ + LP+++ P FRSEAGSAGRDTRG++RQHQF K ELV E+S+ E Sbjct: 239 IHRNEILTADQLPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVLPENSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEEIL+ L L YR V +CTGDLGF+A +DLEVW+ Y EISSCS + Sbjct: 299 LEKLTMDAEEILQLLGLPYRRVKICTGDLGFTAAFKFDLEVWMPSYGRYVEISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N +++ +F HTLNGSG+AVGRCL AILENY ADGSV +P VLRPYM Sbjct: 359 FQARRANIKFKRDKKSKAEFVHTLNGSGLAVGRCLAAILENYQQADGSVVVPEVLRPYM- 417 Query: 419 NLAVIK 424 + VIK Sbjct: 418 GVDVIK 423 >gi|238026472|ref|YP_002910703.1| seryl-tRNA synthetase [Burkholderia glumae BGR1] gi|237875666|gb|ACR27999.1| Seryl-tRNA synthetase [Burkholderia glumae BGR1] Length = 433 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 198/434 (45%), Positives = 274/434 (63%), Gaps = 11/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R SL+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYILDVAAFSSLEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + E+ S++ +L+ +PN+ E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKASAAKLDEIQSAMSELMLGMPNLAHESVPVGADEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + R+H ++G LG +DF+ KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPRAFDFEVRDHVDVGTPLG-LDFETGAKLSGARFTMLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE P +V + + GTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTQQHGYTETYTPYIVNPDILRGTGQLPKFADDMFRVEKGGGENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++LTN I+++ LP++ T +P FRSEAG+ GRDTRGM+RQHQF K E+V +T + Sbjct: 238 ITLTNTVRESILDAAELPVKLTAHSPCFRSEAGAYGRDTRGMIRQHQFDKVEMVQVTAPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVWL QN YREISSC Sbjct: 298 ASYAALEEMVGHAEAILQKLELPYRVVTLCTGDMGFSAAKTYDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LENY NADGSVT+P L Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPAAL 416 Query: 414 RPYMNNLAVIKKEH 427 RPY+ L I + Sbjct: 417 RPYLGGLDTIAAPN 430 >gi|291288281|ref|YP_003505097.1| seryl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290885441|gb|ADD69141.1| seryl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 422 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 277/424 (65%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++I N + + R + + ++SLDEK + L + + ++A RN S +IG Sbjct: 1 MLDIKYIIANIDEVKKKTADRGAQFDFDLLISLDEKRKSLQAENDVLKAERNKVSKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + ++ + +++ ++ E E + ++ IPN+ +EVP+G N Sbjct: 61 IKRAGG--DISEIQAKMRNAGDRISAIDAELTEAQEQMTDMLLTIPNLIKDEVPVGADEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+L RS G+ ++ H++I E LGL+DF+R K++ +RFS G A LERAL Sbjct: 119 DNVLFRSWGEPKKYSFEAKPHWDIAEGLGLVDFERGVKIAQSRFSAYMGLGAKLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 FM+D H E GY EV AP LV EAM GTGQ+PKF +D F C DG +LIPT+EVS+TNL Sbjct: 179 FMLDAHA-ERGYKEVLAPYLVNAEAMKGTGQLPKFEEDAFKCEKDGLYLIPTAEVSVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 YS EI++ + LP++ + + FR EAGS G+D RG++RQHQF K ELV + + EDS TE Sbjct: 238 YSQEILDEEMLPVKHCSYSACFRREAGSHGKDVRGLIRQHQFNKVELVKVVKPEDSDTEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +L AE IL++L++ YR+++LC+GDLGFS+ KT+D+EVWL Q YREISSCST +F Sbjct: 298 MELLESAEMILQKLNIPYRIMTLCSGDLGFSSAKTFDIEVWLPSQGGYREISSCSTFMDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R+R K ++F HTLNGSG+AVGR +AILENY N DG+VT+P LRPY+N Sbjct: 358 QARRASIRFRRKGDKKVEFAHTLNGSGLAVGRTFLAILENYQNEDGTVTVPEALRPYLNG 417 Query: 420 LAVI 423 L VI Sbjct: 418 LEVI 421 >gi|29374751|ref|NP_813903.1| seryl-tRNA synthetase [Enterococcus faecalis V583] gi|227555780|ref|ZP_03985827.1| seryl-tRNA synthetase [Enterococcus faecalis HH22] gi|257418758|ref|ZP_05595752.1| seryl-tRNA synthetase [Enterococcus faecalis T11] gi|46577438|sp|Q839Q8|SYS1_ENTFA RecName: Full=Seryl-tRNA synthetase 1; AltName: Full=Serine--tRNA ligase 1; Short=SerRS 1; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase 1 gi|29342209|gb|AAO79975.1| seryl-tRNA synthetase [Enterococcus faecalis V583] gi|227175076|gb|EEI56048.1| seryl-tRNA synthetase [Enterococcus faecalis HH22] gi|257160586|gb|EEU90546.1| seryl-tRNA synthetase [Enterococcus faecalis T11] Length = 423 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 204/425 (48%), Positives = 276/425 (64%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN E + LK R ++ + L+LDE R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEGRRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R + + H+EIGEALG++DF+R K+SG+RF G A LERA+ Sbjct: 119 AANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H +EHGYTEV P LV +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI++++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILDAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM Sbjct: 359 FQARRALIRYRDKTG-HVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|327467137|gb|EGF12647.1| serine--tRNA ligase [Streptococcus sanguinis SK330] Length = 425 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 202/428 (47%), Positives = 281/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAEKLATRGVDAATLNQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L +L + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDATLAELDAKLTELTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +ENI +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENIEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|291615031|ref|YP_003525188.1| seryl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] gi|291585143|gb|ADE12801.1| seryl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] Length = 445 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 207/445 (46%), Positives = 267/445 (60%), Gaps = 25/445 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + L R + L+ + + + + ++++A+RN++S IGQ Sbjct: 1 MLDIQTLRNDLAGVAARLATRGYTLDTAKFEQLEAERKTIQTRTQELQAKRNASSKLIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G A+ E L E+L E ++ + ++ IPNVP VP G S Sbjct: 61 AKAKG--EDTTAIMAEVGALGEELKRYEAVLPQLLQEMDAFLAEIPNVPHATVPEGKSEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R VG+ P ++H IGE LG +DF+ ATK++GARFS+L G LA L RAL Q Sbjct: 119 NNLEVRKVGEIPKFAFEVKDHVSIGEGLGGLDFETATKIAGARFSLLKGPLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------------- 225 FM+D HT +HGYTE P LV ++M GTGQ+PKF D+F T Sbjct: 179 FMLDTHTEQHGYTETYVPYLVNADSMRGTGQLPKFEADLFRVTARPSANRLTALIHPEAT 238 Query: 226 -------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 +LIPT+EV +TN+ EI+ + LPL+F P FRSEAGS GRDTRGM+RQ Sbjct: 239 QFEEVGDFYLIPTAEVPVTNMVRDEIVPLEKLPLKFVAHTPCFRSEAGSYGRDTRGMIRQ 298 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 HQF K ELV I E S+ E +L AE ILK L L YRVV LCTGD+GFSA TYD+E Sbjct: 299 HQFDKVELVQIVHPEKSYEALEGLLGHAETILKLLGLPYRVVKLCTGDMGFSAATTYDIE 358 Query: 339 VWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 VWL QN YREISSCS FQ+RRM +R+R+ K + HTLNGSG+AVGR L+AILE Sbjct: 359 VWLPAQNTYREISSCSNFEAFQARRMQARFRNAAGK-PELVHTLNGSGLAVGRTLVAILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNNLAVI 423 NY ADGSV +P LRPYM L I Sbjct: 418 NYQQADGSVKVPEALRPYMGGLTSI 442 >gi|306825809|ref|ZP_07459148.1| serine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432170|gb|EFM35147.1| serine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 424 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 202/427 (47%), Positives = 276/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E +A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDAVAEKLATRGVDAAILNEMKEIDAKRRDILVKVETFKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELKDTNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY NADGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|148653337|ref|YP_001280430.1| seryl-tRNA synthetase [Psychrobacter sp. PRwf-1] gi|172048529|sp|A5WFN9|SYS_PSYWF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|148572421|gb|ABQ94480.1| seryl-tRNA synthetase [Psychrobacter sp. PRwf-1] Length = 428 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 192/430 (44%), Positives = 270/430 (62%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +RQ+ L L KR E ++ ++ + + L ED++A+RN+ + Q+G Sbjct: 1 MIDPKLLRQDLTELKQKLAKRGYELDVDFWQQMESQRKSLQVITEDLQAKRNAGAKQVGV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L E + ++ E+ + + + IPN+P ++VP G+S Sbjct: 61 LKKNG--EDATELLAEMQNISSEMKQAEESLKALQDKINQAALQIPNIPADDVPEGSSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G +EH ++GE LG +DF A KL+G+RFSVL G LA L RAL Q Sbjct: 119 DNVEVRKWGTPRQFDFKVQEHSDLGEVLGQLDFAAAAKLTGSRFSVLKGQLAQLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-------RWLIPTSE 233 FM++ HT ++GYTE P +V +++ GTGQ+PKF +D+F T+ +LIPT+E Sbjct: 179 FMLNTHTVKYGYTECYVPYIVNSDSLEGTGQLPKFEEDLFKLTNHTNNEAMGFYLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL E +++ LPL+FT P FRSEAGS GRDTRG++RQHQF K E+V+I Sbjct: 239 VPMTNLVRGERLDASELPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFEKVEMVNIATAA 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E+M AE IL++L L YRVV LCTGD+GFSA +TYD+EVW+ Q+ YREISSC Sbjct: 299 QSDELLEQMTGQAEYILQQLQLPYRVVKLCTGDMGFSALRTYDIEVWVPSQDTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S CG+FQ+RRM +R + K + HTLNGSG+AVGR L+AI+EN+ NADGS+TIP VL Sbjct: 359 SNCGDFQARRMGTRVK--EGKKTELVHTLNGSGLAVGRTLLAIMENHQNADGSITIPEVL 416 Query: 414 RPYMNNLAVI 423 RPYM +I Sbjct: 417 RPYMGGAEII 426 >gi|242372594|ref|ZP_04818168.1| seryl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] gi|242349649|gb|EES41250.1| seryl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] Length = 435 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 196/427 (45%), Positives = 267/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + +L LDE+ R LI K E+++A+RN S +I Sbjct: 8 MLDIRLFRNEPDKVKSKIELRGDDPKVVDEVLELDEQRRQLIGKTEEMKAKRNKVSEEIA 67 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L +++ + + +EV + ++ ++ IPN+ ++VP G S Sbjct: 68 QKKR--NKENADDVIAEMRNLGDEIKENDAKLNEVDNKVRDILIRIPNLINDDVPQGESD 125 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DFDRA K+SGARF LT AHLERAL Sbjct: 126 EENVELKKWGTPREFNFEPKAHWDLVEDLKMADFDRAAKVSGARFVYLTNEGAHLERALM 185 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +M+ HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 186 NYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 245 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP +FT FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 246 FYRDEIIQPGVLPEKFTGQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWDA 305 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 306 LEDMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 365 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ NS + HTLNGSG+AVGR AI+ENY N DG++TIP L P+M Sbjct: 366 FQARRANIRFKRDNSAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTITIPEALVPFMG 425 Query: 419 NLAVIKK 425 I K Sbjct: 426 GKTKIDK 432 >gi|15675591|ref|NP_269765.1| seryl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|71911296|ref|YP_282846.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|306826795|ref|ZP_07460097.1| serine--tRNA ligase [Streptococcus pyogenes ATCC 10782] gi|30173206|sp|Q99YE2|SYS_STRP1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|13622796|gb|AAK34486.1| putative seryl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|71854078|gb|AAZ52101.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|304431084|gb|EFM34091.1| serine--tRNA ligase [Streptococcus pyogenes ATCC 10782] Length = 425 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 268/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + ++ LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDTVAAKLKNRGVSEDTLTHLKELDEKRRALLVQSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + + + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDATQQIADMQKVSADIKTIDNQLVAIDQQVTDIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV+SLCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|307706061|ref|ZP_07642880.1| seryl-tRNA synthetase [Streptococcus mitis SK321] gi|307618461|gb|EFN97609.1| seryl-tRNA synthetase [Streptococcus mitis SK321] Length = 424 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 203/427 (47%), Positives = 278/427 (65%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFDSVAEKLATRGVDAAVLNDMKEIDAKRRDILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKIAAMQTLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 EDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDSNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY NADGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 AVIK Sbjct: 418 GAAVIKP 424 >gi|195977559|ref|YP_002122803.1| seryl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|238689799|sp|B4U1C3|SYS_STREM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|195974264|gb|ACG61790.1| seryl-tRNA synthetase SerS [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 425 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 197/428 (46%), Positives = 272/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + + +LDE+ R L+ + E+++A+RN SA I Sbjct: 1 MLDLKRIRTDFDAVAAKLKTRGVSEDTLTTLKALDEQRRALLVQTEELKAQRNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + L + +++ + ++ + +I+ +PN P + VPIG Sbjct: 61 QAKRQKK--DASQQIADMQQLAANIKVIDAKLADIDQEITSIITVLPNTPHDSVPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR GK + H+++GEAL ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGKPRQFDFDIKAHWDLGEALDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F ++ IPT+EV LTN Sbjct: 179 NFMLDEHLKE-GYQEIIPPYMVNHDSMFGTGQYPKFKEDTFELDGTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +II+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 238 YYRGDIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPETSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAEHILQKLKLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L +IK Sbjct: 418 GLELIKPR 425 >gi|163791200|ref|ZP_02185617.1| seryl-tRNA synthetase [Carnobacterium sp. AT7] gi|159873531|gb|EDP67618.1| seryl-tRNA synthetase [Carnobacterium sp. AT7] Length = 427 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 195/429 (45%), Positives = 275/429 (64%), Gaps = 4/429 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R + + L+ R ++ + E ++LD++ R LI E++++ RN S I Sbjct: 1 MLDIKQLRTDFDVTAKKLEIRGVKSELLEEFVTLDKERRSLIVTTEELKSYRNEVSGAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + D E + E++ L+++ + ++ + + +PN+P E VP+G Sbjct: 61 TLKRS--KANADDKIKEMREVGEKIKELDEQLAVIDEKIENIATGLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ IR G S+ H+E+ E L ++DF+R K+SG+RF G A LERA+ Sbjct: 119 EANVEIRKWGTPLKVDFESKAHWEVAEELNILDFERGAKVSGSRFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+DLHT EHGYTE+ P LV ++M+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDLHTEEHGYTEMMTPYLVNSDSMFGTGQFPKFKEDVFQIEGTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EI++ + LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 239 YYRNEILKEEQLPVYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSKPETSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE +L++L+L YRV++LCTGD+GFSA KTYDLEVW+ Q YREISSCS Sbjct: 299 LEKMTNNAEAVLQKLNLPYRVLALCTGDMGFSAAKTYDLEVWIPAQETYREISSCSNTEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR+ + L++ HTLNGSG+AVGR + AILENY ADGSV IP VL PYM Sbjct: 359 FQARRAKIRYRNEETGKLEYVHTLNGSGLAVGRTIAAILENYQQADGSVKIPEVLIPYMG 418 Query: 419 NLAVIKKEH 427 I+K + Sbjct: 419 GTTEIRKAN 427 >gi|260752559|ref|YP_003225452.1| seryl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551922|gb|ACV74868.1| seryl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 425 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 220/424 (51%), Positives = 294/424 (69%), Gaps = 1/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR P++ D AL +R EP S+ IL +D + R L +++ ++ +RN S QIGQ Sbjct: 1 MHDIRLIRSEPDNFDKALSRRGFEPVSKTILEMDGERRTLALELQTLQTKRNEVSRQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ +G + +K E S +KE++ LE EE + L++ +S IPN+ E+VP G Sbjct: 61 AMKQGEKDKAEEMKAEVSAIKEKMAALEGEEAALGDKLQRFLSTIPNLAAEDVPEGKDEQ 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + G+ +EH + ALG +DFD A +SGARF+++ G +A L RA+GQ Sbjct: 121 DNKEVFRWGEPRQFSFKPKEHADFAPALG-LDFDTAAAMSGARFALMKGAMARLNRAIGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 +M+D T ++G+TE++ PLLVRD A++GTGQ+PKF +D+F TTD RWLIPT+EV LTN+ Sbjct: 180 YMLDCQTEKNGFTEIAPPLLVRDHALFGTGQLPKFEEDLFHTTDDRWLIPTAEVCLTNIV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I++ K+LPLRFT L P FR+EAG+AGRDTRG++RQHQF K E+V+IT E S E Sbjct: 240 RESILDEKALPLRFTALTPCFRAEAGAAGRDTRGLIRQHQFDKVEMVAITTPEQSTAEQM 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM+ CAE+IL+ L L YR V LCTGD+GFSA +TYDLEVWL GQN YREISS S CG FQ Sbjct: 300 RMVECAEQILQNLKLPYRRVLLCTGDMGFSATRTYDLEVWLPGQNCYREISSISDCGAFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR K HTLNGSG+AVGR L+AILENY DG+VTIP VL PYMN + Sbjct: 360 ARRMNTRYRPEEGKGNAAVHTLNGSGLAVGRTLVAILENYQEEDGTVTIPEVLHPYMNGI 419 Query: 421 AVIK 424 ++ Sbjct: 420 TKLE 423 >gi|260220448|emb|CBA27995.1| Seryl-tRNA synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 436 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 190/437 (43%), Positives = 270/437 (61%), Gaps = 15/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ + + L R + +L+ + + + + E+++A+RNS S Q Sbjct: 1 MLDITLLRKDLDSVVARLLTRKNPQAFLNVDAFKALEAERKTIQMRTEEMQAKRNSVSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +G + DA E TLK +L + + ++K++ +PN+P E VP+G Sbjct: 61 IGMLKGKGQHAEADAAMAEVGTLKAELEASATRLDAIQAEMEKMLLAVPNLPHESVPMGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N++ R+ G S ++H ++G+ LG +DF+ KL+G+RF+V+ G +A L RA Sbjct: 121 DESGNVVARTWGTPKSFDFEVKDHVDLGQPLG-LDFEMGVKLTGSRFTVMKGQIARLHRA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF----------CTTDGRW 227 L QFM+D T EHGYTE P +V +++ GTGQ+PKF +D+F + Sbjct: 180 LAQFMLDTQTGEHGYTECYTPYIVNGDSLRGTGQLPKFEEDLFAAKKGGQDGGDDNTALY 239 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LIPTSEV LTN + LP++ T P FRSEAGS GRD RG++RQHQF K E+V Sbjct: 240 LIPTSEVPLTNFVRDVVSAESDLPIKLTAHTPCFRSEAGSGGRDIRGLIRQHQFDKVEMV 299 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 I E S+ E M AE IL++L L YRV+SLCTGD+GF A KTYDLEVWL QN Y Sbjct: 300 QIVHPEKSYEALEDMTRHAEAILQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQNTY 359 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 REISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ Sbjct: 360 REISSVSNCEAFQARRLQARFKNAQGKN-ELVHTLNGSGLAVGRALVAVLENHQNADGSI 418 Query: 408 TIPTVLRPYMNNLAVIK 424 T+P VLRPYM + V+K Sbjct: 419 TVPEVLRPYMGGVEVLK 435 >gi|94967422|ref|YP_589470.1| seryl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] gi|94549472|gb|ABF39396.1| seryl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] Length = 432 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 202/431 (46%), Positives = 274/431 (63%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD+ ++R N ++ L++R + P + +D + R I + E ++A+RN S QI Sbjct: 3 MLDLGFVRDNLALVEEKLRQRGMNPDEVLKGFPEIDARRRAAITEAETLKAQRNKASEQI 62 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 Q N AL ET +E++ EK ++ +++ IPN+P E VP+G S Sbjct: 63 AQLKK--NKQDATALIEETKQAREKIAEFEKNAEAAEGAMCEILVSIPNLPHESVPVGRS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N +R G KP+ + H+E+GE LG++D +RA K++GARF+V A LERAL Sbjct: 121 EHDNQEVRQWGTKPTFDFTPKPHWELGEELGVLDMERAAKITGARFAVYWDLGAKLERAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVS 235 FM+DLHT EHGYTEV P LV ++MYGTGQ+PKF D+F +LIPT+EV Sbjct: 181 MNFMLDLHTKEHGYTEVLPPFLVNADSMYGTGQLPKFEADLFKVPHGERNLYLIPTAEVP 240 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLY E +++ LP T P FRSEAGS G+D RG++RQHQF K ELV T+ E+S Sbjct: 241 VTNLYRDETLDAAQLPTSLTAYTPCFRSEAGSYGKDVRGIIRQHQFQKVELVKFTKPEES 300 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE++ AEE+L+RL LHYR + LCTGD+GFS+ KTYD+EVWL GQNLYREISSCS Sbjct: 301 YAEHEKLTRNAEEVLQRLGLHYRTMVLCTGDMGFSSAKTYDIEVWLPGQNLYREISSCSN 360 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR N RYR HT+NGSG+A+GR +AI+ENY ADG+V IP VLRP Sbjct: 361 FESFQARRANIRYRPEGKNKTDLVHTINGSGLAIGRTWVAIIENYQQADGTVVIPEVLRP 420 Query: 416 YMNNLAVIKKE 426 Y+ I Sbjct: 421 YI-GAERITPR 430 >gi|329724156|gb|EGG60674.1| serine--tRNA ligase [Staphylococcus epidermidis VCU144] Length = 428 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 267/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + ++ R +P+ + +L LDE+ R LI K E+++A+RN S +I Sbjct: 1 MLDIRLFRNEPEKVKRKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L +++ ++ + +EV + ++ ++ IPN+ E+VP G S Sbjct: 61 QKKR--NKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGASD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DF+RA K+SGARF LT A LERAL Sbjct: 119 EENVEVKKWGTPRDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +M+ HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP FT FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 239 FYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG++TIP L P+M Sbjct: 359 FQARRANIRFKRDTASKPELVHTLNGSGLAVGRTFAAIVENYQNEDGTLTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I+K Sbjct: 419 GKTKIEK 425 >gi|256964070|ref|ZP_05568241.1| seryl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|307274105|ref|ZP_07555314.1| seryl-tRNA synthetase [Enterococcus faecalis TX0855] gi|256954566|gb|EEU71198.1| seryl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|306509230|gb|EFM78291.1| seryl-tRNA synthetase [Enterococcus faecalis TX0855] Length = 423 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 205/425 (48%), Positives = 278/425 (65%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN E + LK R ++ + L+LDE+ R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEERRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R + + H+EIGEALG++DF+R K+SG+RF G A LERA+ Sbjct: 119 AANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H +EHGYTEV P LV +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI+E++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILEAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q +YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKMYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM Sbjct: 359 FQARRALIRYRDKTG-HVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|312952534|ref|ZP_07771401.1| seryl-tRNA synthetase [Enterococcus faecalis TX0102] gi|310629532|gb|EFQ12815.1| seryl-tRNA synthetase [Enterococcus faecalis TX0102] gi|315153454|gb|EFT97470.1| seryl-tRNA synthetase [Enterococcus faecalis TX0031] Length = 423 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 203/425 (47%), Positives = 276/425 (64%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN E + LK R ++ + L+LDE+ R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEERRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R + + H+EIGEALG++DF+R K+SG+RF A LERA+ Sbjct: 119 AANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKDLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H +EHGYTEV P LV +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI++++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILDAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM Sbjct: 359 FQARRALIRYRDKTG-HVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|242239683|ref|YP_002987864.1| seryl-tRNA synthetase [Dickeya dadantii Ech703] gi|242131740|gb|ACS86042.1| seryl-tRNA synthetase [Dickeya dadantii Ech703] Length = 431 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 196/432 (45%), Positives = 266/432 (61%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIAL-KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R + + L +R + E + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRNELDAVAEKLLARRDFKLDVEALRKREERRKVLQVETESLQAERNSRSKDIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G ++ L+ E +TL E+L + E ++ S ++ + IPN+P + VP+G Sbjct: 61 SAKARG--EDIEPLRREVNTLGERLDAAKVELEQIQSDIQAIALTIPNLPDDCVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN + G+ R+H ++GE G + KL+G+RFSV+ G +A L RAL Sbjct: 119 SENQEVFRWGEPRQFDFPVRDHVDLGELSGGLSMALGVKLTGSRFSVMKGQVARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPT 231 QFM++LHT+EHGY E P LV +YGTGQ+PKF +D+F T LIPT Sbjct: 179 QFMLNLHTAEHGYEEAYVPYLVNHATLYGTGQLPKFKEDLFHTRPLEEEAETSSYALIPT 238 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV LTNL EI++ +SLP++ T P FRSEAGS GRD RG++R HQF K E+V I R Sbjct: 239 AEVPLTNLVRDEILDEESLPIKLTAHTPCFRSEAGSYGRDMRGLIRVHQFDKVEMVQIVR 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS E + AE++L+ L L YR V LCTGD+GF +CKTYDLEVWL QN YREIS Sbjct: 299 PEDSMQALEELTGHAEKVLQLLQLPYRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS G+FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY ADG + +P Sbjct: 359 SCSNMGDFQARRMQARCRGKGDKKTRLVHTLNGSGLAVGRALVAVLENYQQADGRIEVPE 418 Query: 412 VLRPYMNNLAVI 423 VLRPYM L +I Sbjct: 419 VLRPYMGGLEII 430 >gi|56551882|ref|YP_162721.1| seryl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|241761798|ref|ZP_04759884.1| seryl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|67461650|sp|Q5NNV0|SYS_ZYMMO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|56543456|gb|AAV89610.1| seryl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|241373712|gb|EER63272.1| seryl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 425 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 221/424 (52%), Positives = 294/424 (69%), Gaps = 1/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR PE+ D AL +R EP S+ IL +D + R L +++ ++ +RN S QIGQ Sbjct: 1 MHDIRLIRSEPENFDKALSRRGFEPVSKTILEMDGERRTLALELQTLQTKRNEVSRQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ +G + +K E S +KE++ LE EE + L++ +S IPN+ E+VP G Sbjct: 61 AMKQGEKDKAEEMKAEVSAIKEKMAALEGEEAALGDKLQRFLSTIPNLAAEDVPEGKDEQ 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + G+ +EH + ALG +DFD A +SGARF+++ G +A L RA+GQ Sbjct: 121 DNKEVFRWGEPRQFSFKPKEHADFAPALG-LDFDTAAAMSGARFALMKGAMARLNRAIGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 +M+D T ++G+TE++ PLLVRD A++GTGQ+PKF +D+F TTD RWLIPT+EV LTN+ Sbjct: 180 YMLDCQTEKNGFTEIAPPLLVRDHALFGTGQLPKFEEDLFHTTDDRWLIPTAEVCLTNIV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I++ K+LPLRFT L P FR+EAG+AGRDTRG++RQHQF K E+V+IT E S E Sbjct: 240 RESILDEKALPLRFTALTPCFRAEAGAAGRDTRGLIRQHQFDKVEMVAITTPEQSTAEQM 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM+ CAE+IL+ L L YR V LCTGD+GFSA +TYDLEVWL GQN YREISS S CG FQ Sbjct: 300 RMVECAEQILQNLKLPYRRVLLCTGDMGFSATRTYDLEVWLPGQNCYREISSISDCGAFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR K HTLNGSG+AVGR L+AILENY DG+VTIP VL PYMN + Sbjct: 360 ARRMNTRYRPEEGKGNAAVHTLNGSGLAVGRTLVAILENYQEEDGTVTIPEVLHPYMNGI 419 Query: 421 AVIK 424 ++ Sbjct: 420 TKLE 423 >gi|312862541|ref|ZP_07722783.1| serine--tRNA ligase [Streptococcus vestibularis F0396] gi|311101946|gb|EFQ60147.1| serine--tRNA ligase [Streptococcus vestibularis F0396] Length = 425 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 197/428 (46%), Positives = 270/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + L L R + + + LD K R L+ K E+++A+RN S I Sbjct: 1 MLDVKRIRNDFDALSEKLATRGVVAETLNELKELDVKRRELLIKSEELKAQRNIASDGIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + ++ ++ E + L ++ +PN P E VP+GT Sbjct: 61 QAKR--NKEDASEQIAAMQKVSAEIKEIDSELAAIDEKLNNIVVTLPNTPHETVPVGTDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPRDFDFEIKPHWDLGEDLGILDWERGAKVTGSRFLFYKGLGAKLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTE+ P +V ++M+GTGQ PKF +D F ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEMITPYMVNHDSMFGTGQYPKFKEDTFELDGTDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPESSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVVNAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVISPK 425 >gi|296329009|ref|ZP_06871516.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153902|gb|EFG94713.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 421 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 198/425 (46%), Positives = 274/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + + LD K R ++ ++E+++ RN+ SA+I Sbjct: 1 MLELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNASAEIAN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + D + + + ++ L+ E E+ +K + IPNV PIG + Sbjct: 61 LKKEKKNA--DHIIEKMGEVSTKIKDLDAELVEIDEKIKDIQLNIPNVYHPSTPIGPDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G + H++IGE LG++DF+R KLSG+RF + G A LERA+ Sbjct: 119 YNLEIRKWGIPKKCDFEPKSHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERAIIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 179 FMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E Sbjct: 239 RKEILEQAELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 299 KMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR PN +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM + Sbjct: 359 ARRMGLKYRVPNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGV 416 Query: 421 AVIKK 425 VIKK Sbjct: 417 DVIKK 421 >gi|327462380|gb|EGF08705.1| serine--tRNA ligase [Streptococcus sanguinis SK1057] Length = 425 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 279/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAEKLATRGVDAATLNQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P VP+G Sbjct: 61 QAKR--NKENADNKIAAMQKLSSEVKNLDASLAELDAKLTEFTTTLPNIPHGSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|27466925|ref|NP_763562.1| seryl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57865923|ref|YP_190086.1| seryl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|30173136|sp|Q8CU95|SYS_STAES RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67461620|sp|Q5HK07|SYS_STAEQ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|27314467|gb|AAO03604.1|AE016744_7 seryl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57636581|gb|AAW53369.1| seryl-tRNA synthetase [Staphylococcus epidermidis RP62A] Length = 428 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 267/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + ++ R +P+ + +L LDE+ R LI K E+++A+RN S +I Sbjct: 1 MLDIRLFRNEPEKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L +++ ++ + +EV + ++ ++ IPN+ E+VP G S Sbjct: 61 QKKR--NKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGASD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DF+RA K+SGARF LT A LERAL Sbjct: 119 EENVEVKKWGTPRDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +M+ HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP FT FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 239 FYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG++TIP L P+M Sbjct: 359 FQARRANIRFKRDAASKPELVHTLNGSGLAVGRTFAAIVENYQNEDGTLTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I+K Sbjct: 419 GKTKIEK 425 >gi|94994938|ref|YP_603036.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|166223298|sp|Q1J594|SYS_STRPF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|94548446|gb|ABF38492.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10750] Length = 425 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 268/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + ++ LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDTVAAKLKNRGVSEDTLTHLKELDEKRRTLLVQSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + + + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDATQQIADMQKVSADIKTIDNQLVAIDQQVTDIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV+SLCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|329735738|gb|EGG72019.1| serine--tRNA ligase [Staphylococcus epidermidis VCU028] Length = 428 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 267/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + ++ R +P+ + +L LDE+ R LI K E+++A+RN S +I Sbjct: 1 MLDIRLFRNEPEKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L +++ ++ + +EV + ++ ++ IPN+ E+VP G S Sbjct: 61 QKKR--NKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGDSD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DF+RA K+SGARF LT A LERAL Sbjct: 119 EENVEVKKWGTPRDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +M+ HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP FT FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 239 FYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG++TIP L P+M Sbjct: 359 FQARRANIRFKRDAASKPELVHTLNGSGLAVGRTFAAIVENYQNEDGTLTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I+K Sbjct: 419 GKTKIEK 425 >gi|312795387|ref|YP_004028309.1| Seryl-tRNA synthetase [Burkholderia rhizoxinica HKI 454] gi|312167162|emb|CBW74165.1| Seryl-tRNA synthetase (EC 6.1.1.11) [Burkholderia rhizoxinica HKI 454] Length = 430 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 204/432 (47%), Positives = 272/432 (62%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI +R++ + + L R +L+ + R L ED+++RRNS S QIG Sbjct: 1 MLDITLLRKDIDAVAQRLADRGYTLDVAAFQALESERRRLQTHTEDLQSRRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ + + + +++ + EV + L +L+ IPN+P E VP+G Sbjct: 61 MKGRG--EDTSAVMAQVTGIGDEMKASALQLEEVQAKLSELMLGIPNLPHESVPVGADEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + ++H +IG LG +DF+ KL+GARF+VL G A L RAL Q Sbjct: 119 SNVEVRRWGTPRTFDFAVKDHVDIGVPLG-VDFEAGAKLAGARFTVLRGQAARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT HGYTE P +V E++YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMLDTHTQTHGYTECYTPYIVNPESLYGTGQLPKFADDMFRVEKGGGDNKVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+++ LP+R T +P FRSEAG+ GRDTRGM+RQHQF K E+V IT + Sbjct: 238 ISLTNTVRDSIVDADRLPIRLTAHSPCFRSEAGAYGRDTRGMIRQHQFDKVEMVQITSPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE IL+RL+L YRV++LCTGD+GFSA KTYDLEVWL Q YREISSC Sbjct: 298 SSYQALEEMVGHAETILQRLELPYRVITLCTGDMGFSAAKTYDLEVWLPAQRAYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +R+R+ K + HTLNGSG+AVGR L+AILEN NADGSVTIPT L Sbjct: 358 SNTEAFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAILENGQNADGSVTIPTAL 416 Query: 414 RPYMNNLAVIKK 425 RPYM +A ++ Sbjct: 417 RPYMGGIARLEP 428 >gi|148553561|ref|YP_001261143.1| seryl-tRNA synthetase [Sphingomonas wittichii RW1] gi|166223292|sp|A5V3Y9|SYS_SPHWW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|148498751|gb|ABQ67005.1| seryl-tRNA synthetase [Sphingomonas wittichii RW1] Length = 425 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 225/426 (52%), Positives = 290/426 (68%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR++P D A+ +R E S +L+LDE+ R + +++ + RRN S IGQ Sbjct: 1 MHDIRLIREDPAAFDAAIARRGAESASSRLLALDERRRAIATELQAAQTRRNEASKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+ + + AL E + LKE++P LE E EV ++L ++ IPN+P +VP G Sbjct: 61 AKAQKDEATASALMAEVAALKERMPALEAEGAEVEAALDAALAAIPNLPAADVPDGADEQ 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N G P+ +REH + LG +DF+ A +SGARF+VL G +A L+RALG Sbjct: 121 DNAEQHRWGTPPAFAFEAREHADFAGPLG-LDFEAAAAISGARFAVLKGGIARLQRALGA 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D T G+TEV PLLVRDEA++GTGQ+PKFA+D+F TTDGRWLIPT+EVSLTNL Sbjct: 180 FMLDRQT-AAGFTEVIPPLLVRDEAVFGTGQLPKFAEDLFRTTDGRWLIPTAEVSLTNLV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +I+ LP++ T L P FRSEAG+AGRDTRG++RQHQF K ELV+IT E S HE Sbjct: 239 REQIVAEAELPMKMTALTPCFRSEAGAAGRDTRGLIRQHQFEKVELVAITTPEQSDAVHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 M AE IL+ L L YR V LCTGD+GF+A KT+DLEVWL GQ YREISS S CG+FQ Sbjct: 299 AMTKAAEAILEALGLPYRRVLLCTGDMGFTARKTFDLEVWLPGQGCYREISSVSNCGDFQ 358 Query: 361 SRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 +RRMN+RYR K +F HTLNGSG+AVGR L+A+LENY ADGSVTIP L PYM Sbjct: 359 ARRMNARYRPAGESKGTRFVHTLNGSGLAVGRTLVAVLENYQQADGSVTIPEALVPYMGG 418 Query: 420 LAVIKK 425 +A ++ Sbjct: 419 IAELRP 424 >gi|94499679|ref|ZP_01306216.1| seryl-tRNA synthetase [Oceanobacter sp. RED65] gi|94428433|gb|EAT13406.1| seryl-tRNA synthetase [Oceanobacter sp. RED65] Length = 426 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 187/426 (43%), Positives = 276/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +R+NPE + +ALKK+ + E SLD K + + ++++A + S Q+G Sbjct: 1 MLDIRRVRENPEEVAVALKKKGYDFDIESFKSLDAKRKQADVESQNLQAEKKKASKQVGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 I EG +A K S + ++L + E+ ++ L+ IPN+P EVP G+ Sbjct: 61 LIKEGLSPE-EAKKKALSGIDDKLEASVAQAKEIQQQIQDLLLSIPNIPDSEVPEGSDEE 119 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R+ G + ++H ++G+A+G +DF+ A K++G+RF+V+ G +A L RAL Q Sbjct: 120 DNVEVRTWGDPKAFDFEVKDHVDVGQAIGGLDFELAAKITGSRFAVMRGDIARLHRALTQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVSLT 237 FM++ H +HGYTE P +V +++ GTGQ+PKF +D+F +LIPT+EV +T Sbjct: 180 FMLNTHIDDHGYTETYVPYMVNADSLRGTGQLPKFEEDLFKIPFNDSCYYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+ EI+++ LP++ P FRSEAGS GRDTRGM+RQHQF K ELV + + EDS Sbjct: 240 NIARDEILDANELPVKMACHTPCFRSEAGSYGRDTRGMIRQHQFEKVELVQMVKPEDSDQ 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E + AE+IL+ L+L YR+V+LC GDLGFSA KTYD+EVWL GQ +REISSCS Sbjct: 300 ALEELTGHAEKILQALELPYRLVTLCGGDLGFSAAKTYDIEVWLPGQQKFREISSCSNFR 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RRM +R+R+P + + HT+NGSG+AVGR L+A+LENY DG V IP L+PY+ Sbjct: 360 DYQARRMQARWRNPETNKPELLHTINGSGLAVGRTLVAVLENYQQEDGRVAIPKALQPYI 419 Query: 418 NNLAVI 423 N I Sbjct: 420 GNKEYI 425 >gi|282874728|ref|ZP_06283607.1| serine--tRNA ligase [Staphylococcus epidermidis SK135] gi|281296444|gb|EFA88959.1| serine--tRNA ligase [Staphylococcus epidermidis SK135] gi|329736077|gb|EGG72350.1| serine--tRNA ligase [Staphylococcus epidermidis VCU045] Length = 428 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 267/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + ++ R +P+ + +L LDE+ R LI K E+++A+RN S +I Sbjct: 1 MLDIRLFRNEPEKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L +++ ++ + +EV + ++ ++ IPN+ E+VP G S Sbjct: 61 QKKR--NKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGDSD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DF+RA K+SGARF LT A LERAL Sbjct: 119 EENVEVKKWGTPRDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +M+ HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP FT FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 239 FYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG++TIP L P+M Sbjct: 359 FQARRANIRFKRDAASKPELVHTLNGSGLAVGRTFAAIVENYQNEDGTLTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I+K Sbjct: 419 GKTKIEK 425 >gi|126736003|ref|ZP_01751747.1| seryl-tRNA synthetase [Roseobacter sp. CCS2] gi|126714560|gb|EBA11427.1| seryl-tRNA synthetase [Roseobacter sp. CCS2] Length = 486 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 202/429 (47%), Positives = 267/429 (62%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP D AL +R P S IL+LDE R I E +A N + ++G Sbjct: 57 MHDIRTIRDNPAAFDAALSRRGNAPVSSQILALDEARRAKILAAETAQAEANKAAKEVGA 116 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ L+ K ++ L E ++L ++ IPN+P +P G + Sbjct: 117 AKGRGDEDEFARLRALVGEKKAEIAALNDEAKAQDAALTDMLMGIPNLPDASIPDGDDED 176 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G + EHF+I MDF+ A KLSG+RF +L+G +A L RAL Q Sbjct: 177 DNVEIHRHGTPRTLDFDPLEHFDIPAIRPGMDFETAAKLSGSRFVLLSGAVARLHRALAQ 236 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+H EHG E P+LVR+E MYGTGQ+PKF +D + TT+G WLIPT+EV+LTN+ Sbjct: 237 FMLDVHVEEHGLLETITPVLVREEMMYGTGQLPKFGEDSYQTTNGWWLIPTAEVTLTNIV 296 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + ++ LP R+ FRSEAGSAGRDT GMLRQHQF K E+VS+T+ EDS EH+ Sbjct: 297 NGLTVDESYLPRRYVAHTQCFRSEAGSAGRDTSGMLRQHQFEKVEMVSVTKPEDSAAEHD 356 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CA+ IL++L+L YR V LCTGDLGF KT+D+EVWL GQN YREISS S G++Q Sbjct: 357 RMTGCAQAILEKLELPYRTVVLCTGDLGFGMTKTHDIEVWLPGQNTYREISSVSVAGDYQ 416 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ +F HTLNGSG+AVGR LIA++EN ADGSV +P L PY+ Sbjct: 417 ARRMNARFKPEAGGKPQFVHTLNGSGLAVGRALIAVVENGQQADGSVDLPAALHPYLRGK 476 Query: 421 AVIKKEHIL 429 I + L Sbjct: 477 TRIDADGQL 485 >gi|161485661|ref|NP_603020.2| seryl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|30173182|sp|Q8RH11|SYS_FUSNN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase Length = 421 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 198/425 (46%), Positives = 274/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + + LD K R ++ ++E+++ RN+ SA+I Sbjct: 1 MLELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNASAEIAN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + D + + + ++ L+ E E+ +K + IPNV PIG + Sbjct: 61 LKKEKKNA--DHIIEKMGEVSTKIKDLDAELVEIDEKIKDIQLNIPNVYHPSTPIGPDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G + H++IGE LG++DF+R KLSG+RF + G A LERA+ Sbjct: 119 YNLEIRKWGIPKKFDFEPKSHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERAIIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 179 FMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E Sbjct: 239 RKEILEQAELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 299 KMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR PN +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM + Sbjct: 359 ARRMGLKYRVPNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGV 416 Query: 421 AVIKK 425 VIKK Sbjct: 417 DVIKK 421 >gi|94989115|ref|YP_597216.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94993007|ref|YP_601106.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|166223295|sp|Q1JA99|SYS_STRPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166223296|sp|Q1JKF1|SYS_STRPC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|94542623|gb|ABF32672.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|94546515|gb|ABF36562.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS2096] Length = 425 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 268/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + ++ LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDTVAAKLKNRGVSEDTLTHLKELDEKRRTLLVQSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + + + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDATQQIADMQKVSADIKTIDNQLVAIDQQVTDIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFNFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV+SLCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|327472776|gb|EGF18203.1| serine--tRNA ligase [Streptococcus sanguinis SK408] Length = 425 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 201/428 (46%), Positives = 278/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + S+D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDSVAKKLATRGVDAATLNQMKSIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIVAMQKLSAEVKNLDATLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 EENVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNKDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|117924380|ref|YP_864997.1| seryl-tRNA synthetase [Magnetococcus sp. MC-1] gi|166222739|sp|A0L6J8|SYS_MAGSM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|117608136|gb|ABK43591.1| seryl-tRNA synthetase [Magnetococcus sp. MC-1] Length = 430 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 187/431 (43%), Positives = 263/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR + ++ AL++R +L+ + R + ++E ++++RN+ S +IGQ Sbjct: 1 MLDIKRIRTETDAVEAALQRRGGAVDLNAFRALEGRKRTIQTEVEQLQSQRNTLSKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A L + + +L LE E+ ++ +I +PN P VP G Sbjct: 61 RKAA--REDASDLFEQMQRVGPRLKELESVLAELEGQVEAIIVALPNTPHSSVPDGLGEQ 118 Query: 121 ENILIRSVGK-------KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 +N+ +R ++ H+EIGEALG++DF+ ++G+RF+V G A Sbjct: 119 DNVEVRRWSPSGGEGGDPQVLGFEAKNHWEIGEALGILDFEAGAAVAGSRFTVFKGVGAR 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTS 232 L RAL +M+DLHT HGY E+ P+L E ++GTGQ+PKF +D+F T D ++IPT+ Sbjct: 179 LSRALANYMLDLHTGSHGYQEILPPVLTNAECLFGTGQLPKFEEDLFRTRDDAYYMIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL +I+E LP+R T FR EAGSAG+DTRG++RQHQF K ELV I R Sbjct: 239 EVPVTNLVREQILEDSQLPMRMTAWTNCFRREAGSAGKDTRGLIRQHQFDKVELVQIRRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S+ E + AE++LK L L +R V LC+GD+GF A KTYD+EVWL GQ YREISS Sbjct: 299 EESYAALEELTGHAEQVLKGLGLPFRTVVLCSGDMGFGASKTYDIEVWLPGQGKYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +R+R + HTLNGSGVAVGR L+A+LENY ADG V +P V Sbjct: 359 CSNTEDFQARRMKARFRREAKGKPELVHTLNGSGVAVGRALVAVLENYQQADGRVVVPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L +I Sbjct: 419 LRPYMGGLEII 429 >gi|242243248|ref|ZP_04797693.1| seryl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242233197|gb|EES35509.1| seryl-tRNA synthetase [Staphylococcus epidermidis W23144] Length = 435 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 267/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + ++ R +P+ + +L LDE+ R LI K E+++A+RN S +I Sbjct: 8 MLDIRLFRNEPEKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIA 67 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L +++ ++ + +EV + ++ ++ IPN+ E+VP G S Sbjct: 68 QKKR--NKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGASD 125 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DF+RA K+SGARF LT A LERAL Sbjct: 126 EENVEVKKWGTPRDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALM 185 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +M+ HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 186 NYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 245 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP FT FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 246 FYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPEDSWNA 305 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 306 LEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 365 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG++TIP L P+M Sbjct: 366 FQARRANIRFKRDAASKPELVHTLNGSGLAVGRTFAAIVENYQNEDGTLTIPEALVPFMG 425 Query: 419 NLAVIKK 425 I+K Sbjct: 426 GKTKIEK 432 >gi|116516325|ref|YP_815885.1| seryl-tRNA synthetase [Streptococcus pneumoniae D39] gi|148983808|ref|ZP_01817127.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|161410754|ref|NP_357966.2| seryl-tRNA synthetase [Streptococcus pneumoniae R6] gi|30173153|sp|Q8DR22|SYS_STRR6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|122279229|sp|Q04M63|SYS_STRP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116076901|gb|ABJ54621.1| seryl-tRNA synthetase [Streptococcus pneumoniae D39] gi|147923955|gb|EDK75067.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|301799511|emb|CBW32058.1| seryl-tRNA synthetase [Streptococcus pneumoniae OXC141] Length = 424 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 275/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSATKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|153208632|ref|ZP_01946889.1| seryl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|165919030|ref|ZP_02219116.1| seryl-tRNA synthetase [Coxiella burnetii RSA 334] gi|212218614|ref|YP_002305401.1| seryl-tRNA synthetase [Coxiella burnetii CbuK_Q154] gi|238065096|sp|B6J7K7|SYS_COXB1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|120575893|gb|EAX32517.1| seryl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|165917285|gb|EDR35889.1| seryl-tRNA synthetase [Coxiella burnetii RSA 334] gi|212012876|gb|ACJ20256.1| seryl-tRNA synthetase [Coxiella burnetii CbuK_Q154] Length = 423 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 261/424 (61%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +RQN EH+ L++R E S+ L L+ K + I+ + +RN S IG Sbjct: 1 MLDPKILRQNLEHVVEKLRRRGFEMDSDTFLQLENKRKEAQLAIQSFQTKRNQLSKTIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G + L E S L ++L E + + IPN+P + VP G S N Sbjct: 61 AKSKGENP--EPLMAEVSQLNDELKQEEANFETIQKAFSDFQLAIPNLPHDSVPDGKSEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G P ++H +GE +DF+ A KLSGARF VL G LA RAL Q Sbjct: 119 DNREIRQWGAPPGFDFTPKDHTVLGERDNQLDFEAAAKLSGARFVVLRGSLARAHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+DLHT +HGY EV P LV +E +YGTGQ+PKF ++ F +L+PT EV L N Sbjct: 179 FMLDLHTDQHGYEEVYVPYLVHEECLYGTGQLPKFREEQFQVAGDRNFFLVPTGEVPLVN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L EIIE+ +LP ++ P FRSEAGS G+D RGM+RQHQF K ELV + + E+S+ Sbjct: 239 LARDEIIEAPALPKKWVAQTPCFRSEAGSYGKDVRGMIRQHQFQKVELVQLVQPENSYQT 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE++L+ L L YRVV LC GDLGF+A KTYDLEVWL QN YREISSCS C + Sbjct: 299 LEEITRQAEKVLQLLALPYRVVELCAGDLGFAAAKTYDLEVWLPSQNKYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +R+R+P + + HTLNGSG+AVGR L+A++ENY ADG + +P L+ YM Sbjct: 359 FQARRIQARWRNPKTGKPELLHTLNGSGLAVGRTLVAVMENYQQADGHIRVPDALKSYMG 418 Query: 419 NLAV 422 + Sbjct: 419 GVDY 422 >gi|251811371|ref|ZP_04825844.1| seryl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|293367573|ref|ZP_06614226.1| serine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|251805120|gb|EES57777.1| seryl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|291318286|gb|EFE58679.1| serine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] Length = 435 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 267/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + ++ R +P+ + +L LDE+ R LI K E+++A+RN S +I Sbjct: 8 MLDIRLFRNEPEKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIA 67 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L +++ ++ + +EV + ++ ++ IPN+ E+VP G S Sbjct: 68 QKKR--NKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGDSD 125 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DF+RA K+SGARF LT A LERAL Sbjct: 126 EENVEVKKWGTPRDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALM 185 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +M+ HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 186 NYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 245 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP FT FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 246 FYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPEDSWNA 305 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 306 LEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 365 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG++TIP L P+M Sbjct: 366 FQARRANIRFKRDAASKPELVHTLNGSGLAVGRTFAAIVENYQNEDGTLTIPEALVPFMG 425 Query: 419 NLAVIKK 425 I+K Sbjct: 426 GKTKIEK 432 >gi|148988163|ref|ZP_01819626.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|148993951|ref|ZP_01823321.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|168488101|ref|ZP_02712300.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|147926627|gb|EDK77700.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|147927540|gb|EDK78567.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|183573172|gb|EDT93700.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|332075256|gb|EGI85726.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA17570] Length = 424 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 276/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+GT Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGTDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSATKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|256846211|ref|ZP_05551669.1| seryl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] gi|256719770|gb|EEU33325.1| seryl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] Length = 424 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 199/425 (46%), Positives = 273/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + + LD K R ++ ++E+++ RN+ SA+I Sbjct: 4 MLELKFMRENVEMLKEMLKNRNSNVDMDTFVELDSKRREILSEVENLKRERNNVSAEIAN 63 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + L + + ++ L+ E E+ +K + IPNV PIG + Sbjct: 64 LKKEKK--DANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHPSTPIGLDED 121 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G + H++IGE LG++DF+R KLSG+RF + G A LERAL Sbjct: 122 YNLEIRKWGVPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAARLERALIN 181 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 182 FMLDVHTLEEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 241 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E Sbjct: 242 RKEILEQAELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDELE 301 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 302 KMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 361 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR PN +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM + Sbjct: 362 ARRMGLKYRVPNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGV 419 Query: 421 AVIKK 425 VIKK Sbjct: 420 DVIKK 424 >gi|15457932|gb|AAK99176.1| Seryl-tRNA synthetase [Streptococcus pneumoniae R6] Length = 445 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 275/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 22 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 81 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 82 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 139 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 140 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 199 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 200 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 258 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 259 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 318 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 319 LEKMTANAENILQKLNLPYRVVALSTGDMGFSATKTYDLEVWIPAQNNYREISSCSNTED 378 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 379 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 438 Query: 419 NLAVIKK 425 VIK Sbjct: 439 GAEVIKP 445 >gi|315305180|ref|ZP_07875168.1| seryl-tRNA synthetase [Listeria ivanovii FSL F6-596] gi|313626448|gb|EFR95593.1| seryl-tRNA synthetase [Listeria ivanovii FSL F6-596] Length = 437 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 183/425 (43%), Positives = 265/425 (62%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R N + + L+ R + + E LD++ R LI + E ++ +RN S +I Sbjct: 10 MLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKNQRNEVSQEIA 69 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + E + +++ L+ E E+ L ++ IPN+P E PIG S Sbjct: 70 KLKREKQDAEAK--IEEMRVVGDRIKTLDIELKEIDDKLDTILMSIPNIPHESTPIGESE 127 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++NI IR G+ + H++IG L ++DF+ A K++G+RF A LERAL Sbjct: 128 DDNIEIRKWGEVREFDFEPKAHWDIGTDLDILDFENAAKVTGSRFVFYKKLGARLERALI 187 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 188 NFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTN 247 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 248 YHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYAA 307 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ N YREISSCS + Sbjct: 308 LEKLTENAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNSYREISSCSNFES 367 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY +ADGSV IP L+ YM Sbjct: 368 FQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDADGSVRIPKALQGYMG 427 Query: 419 NLAVI 423 + I Sbjct: 428 GIERI 432 >gi|15900330|ref|NP_344934.1| seryl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|111657630|ref|ZP_01408364.1| hypothetical protein SpneT_02001184 [Streptococcus pneumoniae TIGR4] gi|148996814|ref|ZP_01824532.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|149023698|ref|ZP_01836178.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|168576870|ref|ZP_02722720.1| seryl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|225860434|ref|YP_002741943.1| seryl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298229691|ref|ZP_06963372.1| seryl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254625|ref|ZP_06978211.1| seryl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502204|ref|YP_003724144.1| seryl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A] gi|307067059|ref|YP_003876025.1| seryl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|30173203|sp|Q97SG0|SYS_STRPN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783497|sp|C1CPS1|SYS_STRZT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|14971880|gb|AAK74574.1| seryl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|147757389|gb|EDK64428.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|147929635|gb|EDK80627.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|183577467|gb|EDT97995.1| seryl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|225728141|gb|ACO23992.1| seryl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298237799|gb|ADI68930.1| seryl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A] gi|306408596|gb|ADM84023.1| Seryl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|327390820|gb|EGE89160.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA04375] gi|332202320|gb|EGJ16389.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA41317] Length = 424 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 275/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|301793653|emb|CBW36038.1| seryl-tRNA synthetase [Streptococcus pneumoniae INV104] Length = 424 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 276/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+GT Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGTDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|212212421|ref|YP_002303357.1| seryl-tRNA synthetase [Coxiella burnetii CbuG_Q212] gi|238065097|sp|B6IZT4|SYS_COXB2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|212010831|gb|ACJ18212.1| seryl-tRNA synthetase [Coxiella burnetii CbuG_Q212] Length = 423 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 261/424 (61%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +RQN EH+ L++R E S+ L L+ K + I+ + +RN S IG Sbjct: 1 MLDPKILRQNLEHVVEKLRRRGFEMDSDTFLQLENKRKEAQLAIQSFQTKRNQLSKTIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G + L E S L ++L E + + IPN+P + VP G S N Sbjct: 61 AKSKGENP--EPLMAEVSQLNDELKQEEANFETIQKAFSDFQLAIPNLPHDSVPDGKSEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G P ++H +GE +DF+ A KLSGARF VL G LA RAL Q Sbjct: 119 DNREIRQWGAPPGFDFTPKDHTVLGERDNQLDFEAAAKLSGARFVVLRGSLARAHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+DLHT +HGY EV P LV +E +YGTGQ+PKF ++ F +L+PT EV L N Sbjct: 179 FMLDLHTDQHGYEEVYVPYLVHEECLYGTGQLPKFREEQFQVAGDRNFFLVPTGEVPLVN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L EIIE+ +LP ++ P FRSEAGS G+D RGM+RQHQF K ELV + + E+S+ Sbjct: 239 LARDEIIEAPALPKKWVAQTPCFRSEAGSYGKDVRGMIRQHQFQKVELVQLVQPENSYQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE++L+ L L YRVV LC GDLGF+A KTYDLEVWL QN YREISSCS C + Sbjct: 299 LEEITRQAEKVLQLLALPYRVVELCAGDLGFAAAKTYDLEVWLPSQNKYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +R+R+P + + HTLNGSG+AVGR L+A++ENY ADG + +P L+ YM Sbjct: 359 FQARRIQARWRNPKTGKPELLHTLNGSGLAVGRTLVAVMENYQQADGHIRVPDALKSYMG 418 Query: 419 NLAV 422 + Sbjct: 419 GVDY 422 >gi|256027996|ref|ZP_05441830.1| seryl-tRNA synthetase [Fusobacterium sp. D11] Length = 421 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 272/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + + LD K R ++ ++E+++ RN+ SA+I Sbjct: 1 MLELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNVSAEIAN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E L + + ++ L+ E E+ +K + IPNV PIG N Sbjct: 61 LKKEKK--DASHLIEKMGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G+ + H++IGE LG++DF+R KLSG+RF + G A LERAL Sbjct: 119 YNLEIRKWGEPKKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 179 FMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E Sbjct: 239 RKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAESSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M+ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 299 KMVKNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR PN +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM + Sbjct: 359 ARRMGLKYRVPNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGV 416 Query: 421 AVIKK 425 VIKK Sbjct: 417 DVIKK 421 >gi|319941978|ref|ZP_08016299.1| seryl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319804631|gb|EFW01501.1| seryl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 432 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 201/433 (46%), Positives = 277/433 (63%), Gaps = 12/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+ +R+N + LK R+ + + L+E+ + + KK E+++ARRNS S IG Sbjct: 1 MLDVTMLRKNLPEVVARLKTRNFDFPVDAFNELEERRKSVQKKTEELQARRNSLSKDIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L + + + +L LE E E+ L L+ +PN+P PIG Sbjct: 61 MKKNG--EDASELLAQAAAIPGELKALEDELEEIREKLHDLMLRVPNLPSPTTPIGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + ++H ++G LG +DFD A KLSGARF+ + G +AHL RAL Q Sbjct: 119 ENVEVRRWGTPRTFDFPVKDHVDVGAPLG-LDFDTAAKLSGARFAFMRGEVAHLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------DGRWLIPTS 232 FM+D+HT E GYTE P +V M GTGQ+PKF +D+F + +L+PT+ Sbjct: 178 FMLDVHTREQGYTECYTPYIVTASTMTGTGQLPKFEEDLFAAKKGGAYSDLEQMYLVPTA 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV+LTN S +I+++ LP+ T P FRSEAG+ GRDTRGM+RQHQF K E+V I R Sbjct: 238 EVTLTNSVSGQILKAADLPIFLTAHTPCFRSEAGAYGRDTRGMIRQHQFDKVEMVKIVRP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S+ + E + AE IL++L+L YRV++L TGD+GF +CKTYDLEVW+ QN YREISS Sbjct: 298 EESYDQLESLTHDAEVILQKLNLPYRVMALSTGDIGFGSCKTYDLEVWIPAQNCYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS C +FQ+RRM++R++D N + ++ HTLNGSG+AVGR L+A+LENY NADGSVTIP Sbjct: 358 CSNCEDFQARRMSARFKDENGR-TRYVHTLNGSGLAVGRTLVAVLENYQNADGSVTIPEA 416 Query: 413 LRPYMNNLAVIKK 425 LRPYMN I Sbjct: 417 LRPYMNGKEKIVP 429 >gi|327475190|gb|AEA77190.1| seryl-tRNA synthetase [Bacillus aquimaris] Length = 425 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 179/426 (42%), Positives = 261/426 (61%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N E + L+ R + LD++ R L+ + E+++++RN S QI Sbjct: 1 MLDIRYLRNNLEDVKARLQHRGEDLEDFGKFEELDKRRRELLVETENLKSKRNEVSGQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E L E + + L+ E + L++++ IPN+P E VP+G + Sbjct: 61 ELKKEKK--DAQDLIVEMREVGGMVKKLDDELKGIEEELERILLSIPNIPHETVPVGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ R G+ ++ H++I LG++DF+RA K++G+RF G A LERAL Sbjct: 119 DDNVEARKWGEVREFDFEAKPHWDIATGLGILDFERAGKVTGSRFVFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH +HGYTE+ P LV +M GTGQ+PKF +D F + +PT+EV +TN Sbjct: 179 NFMMDLHMDKHGYTEMIPPFLVNRASMTGTGQLPKFEEDAFRIESEDYFLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI++ + LP+ + + +FRSEAGSAGRDTRG++RQHQF K ELV + E+S+ Sbjct: 239 YHRDEIMKGEELPISYVAYSANFRSEAGSAGRDTRGLIRQHQFNKVELVRFVKPENSYDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE++L+ L L YRV+S+CT DLGF+A K YD+EVW+ YREISSCS Sbjct: 299 LEELTGHAEKVLQLLGLPYRVLSMCTADLGFTAAKKYDIEVWIPSYGTYREISSCSNFEG 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG+V +P LRPYM Sbjct: 359 FQARRANIRFRREANAKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTVVVPEALRPYMA 418 Query: 419 NLAVIK 424 VIK Sbjct: 419 GAEVIK 424 >gi|296112762|ref|YP_003626700.1| seryl-tRNA synthetase [Moraxella catarrhalis RH4] gi|295920456|gb|ADG60807.1| seryl-tRNA synthetase [Moraxella catarrhalis RH4] Length = 443 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 278/425 (65%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R N E L L R + + ++ + + + K E ++A++N+ + ++G+ Sbjct: 22 MLDPKFLRGNLEELKAKLAVRGYDLDVAFWQEVENQRKSIQVKTEALQAKKNAGAKKVGE 81 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L N+ + E + E E E+ +++ IPN+P + VP+G+ Sbjct: 82 LKRHG--EDTSELMNQMQLVSEAMKAAENELKELQNTITTAALQIPNLPDDSVPVGSDET 139 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H +IGE+LG +DF+ A KL+GARFSVL GHLA L RAL Q Sbjct: 140 DNVEVRRWGVPREFDFAIKDHTDIGESLGQLDFELAAKLTGARFSVLKGHLAKLNRALVQ 199 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE+ P +V +++ GTGQ+PKF +D+F +LIPTSEV LTN Sbjct: 200 FMLDTHTQKYGYTEMYVPYMVNSDSLQGTGQLPKFEEDLFKLRGEKEYYLIPTSEVPLTN 259 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I+ K LP++ T P FRSEAGSAGRDTRG++RQHQF K E+V +TR + S Sbjct: 260 SVRDTILSPKDLPIKLTAHTPCFRSEAGSAGRDTRGLIRQHQFEKVEMVQVTRADSSMQA 319 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE +L+ L+L YRV++LCTGD+GFSA KTYD+EVWL QN+YREISSCS CG+ Sbjct: 320 LEDMTAQAEYVLQALELPYRVMTLCTGDMGFSAVKTYDIEVWLPSQNMYREISSCSNCGD 379 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM++R +D K + HTLNGSG+AVGR L+AILEN+ NADG++TIP L+PYM Sbjct: 380 FQARRMSARLKD--GKHSELVHTLNGSGLAVGRTLLAILENHQNADGTITIPKALQPYMG 437 Query: 419 NLAVI 423 L VI Sbjct: 438 GLEVI 442 >gi|146328644|ref|YP_001209952.1| seryl-tRNA synthetase [Dichelobacter nodosus VCS1703A] gi|166221436|sp|A5EXS3|SYS_DICNV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|146232114|gb|ABQ13092.1| seryl-tRNA synthetase [Dichelobacter nodosus VCS1703A] Length = 426 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 203/428 (47%), Positives = 269/428 (62%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R + + AL +R + L++ + K E ++A RN S QIG+ Sbjct: 1 MIDPKLLRNDLPMVVAALARRGFDFPEAEYQKLEDLRKASQVKSETLQAERNKLSQQIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G L + + L+ + +E +E L L+S +PN+P + VP G N Sbjct: 61 AKSKG--EDCADLMAQAAQLESEQAAVEASFNETQKQLDTLLSSVPNLPDDSVPTGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G + +EH ++ + +DF KL+GARF+VL G L+ L RA+ Q Sbjct: 119 DNPEIRRWGTPRTFDFTPKEHADLMQI--GLDFTNGVKLAGARFTVLRGALSRLHRAIAQ 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLT 237 FM+D HT EHGY E+S P LV + +YGTGQ+PKF D+F T +LIPT+EVSLT Sbjct: 177 FMLDTHTEEHGYQEMSVPYLVNPQTIYGTGQLPKFEQDLFKTRLSDRDFYLIPTAEVSLT 236 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL + EI+E LPL+F P FRSEAGSAGRD RGM+RQHQF K ELV IT EDS Sbjct: 237 NLVAQEILEESVLPLQFVAHTPCFRSEAGSAGRDVRGMIRQHQFDKVELVHITTPEDSHA 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 ER+ + AE IL++L+L YRV+ LCTGD+GF+A KTYDLEVWL GQ YREISSCS C Sbjct: 297 ALERLTAHAERILQKLELPYRVILLCTGDMGFAARKTYDLEVWLPGQGKYREISSCSNCW 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RRM +R+R K + HTLNGSG+AVGR L+AILENY ADG++ IP L+PYM Sbjct: 357 DFQARRMQARFRAEGEKRPQLVHTLNGSGLAVGRTLVAILENYQQADGNILIPKALQPYM 416 Query: 418 NNLAVIKK 425 N L I Sbjct: 417 NGLDRITP 424 >gi|308049679|ref|YP_003913245.1| seryl-tRNA synthetase [Ferrimonas balearica DSM 9799] gi|307631869|gb|ADN76171.1| seryl-tRNA synthetase [Ferrimonas balearica DSM 9799] Length = 429 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 199/430 (46%), Positives = 268/430 (62%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L R + L+E+ + L + E ++A RNS S IGQ Sbjct: 1 MLDSKLLRADLAQTAERLATRGYILDVTRLNELEERRKSLQVETEQLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L E S L QL + E +++ + L + + IPN+P E VP+G + Sbjct: 61 AKARG--EDIEPLLAEVSELGGQLDAKKAELNDLMAELDDIAAGIPNLPHESVPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G+ ++H ++GEA+ +DF A KLSG+RF V+ G +A + RAL Q Sbjct: 119 ENVEVSRWGEPRQFDFEIKDHVDLGEAMNGIDFAMAAKLSGSRFVVMRGQVARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+DLHT+EHGY+E+ P LV ++++GTGQ+PKF +D+F T LIPT+E Sbjct: 179 FMLDLHTTEHGYSEMYVPYLVNPDSLFGTGQLPKFGEDLFHTQPLSEDSDRKLSLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTN EI++ LP+R T P FRSEAGS+GRDTRG++RQHQF K ELV + + E Sbjct: 239 VPLTNFARDEILDEADLPVRMTAHTPCFRSEAGSSGRDTRGLIRQHQFDKVELVQLVKPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 DS E + AE++L+ L L YR V LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 299 DSMAALEELTGHAEKVLQLLGLPYRRVVLCTGDMGFGATKTYDLEVWVPSQNKYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S G+FQ+RRM +R+R K + HTLNGSG+AVGR L+AILENY ADG + IP L Sbjct: 359 SNVGDFQARRMMARFRRTGEKKPELLHTLNGSGLAVGRTLVAILENYQQADGRIEIPEAL 418 Query: 414 RPYMNNLAVI 423 RPYM L I Sbjct: 419 RPYMGGLTHI 428 >gi|299138678|ref|ZP_07031856.1| seryl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] gi|298599314|gb|EFI55474.1| seryl-tRNA synthetase [Acidobacterium sp. MP5ACTX8] Length = 443 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 197/439 (44%), Positives = 270/439 (61%), Gaps = 15/439 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M D+ ++R N ++ L+ R +P LD + R I + E ++A+RN+ S + Sbjct: 1 MHDLAFVRANLPLVEEKLRSRGADPSILADFERLDTERRTAITEAETLKAQRNALSEEFA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + G V A+ + LK++ LE + L++L+ +PN+P + VP G+S Sbjct: 61 KLKRAGG--DVAAISQRSGELKDRTAALEVTASAADAKLRELLQGLPNLPQDGVPAGSSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ ++ G+ ++ H+EIGE LG++DF RA K+SG+RF V G A LERAL Sbjct: 119 HDNVCEKTWGEPTKFDFPAKPHWEIGEELGILDFGRAAKISGSRFVVHFGAGARLERALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------------DGRW 227 FM+DLHT E+GY EV P +V +++GTG +PKFA+D+F + W Sbjct: 179 NFMLDLHTRENGYAEVLPPFMVNSTSLFGTGNLPKFAEDLFHCDDKGPYIPGQLHENDHW 238 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LIPT+EV +TNL+ E I+ + FT P FRSEAGS G+D RGM+RQHQF K ELV Sbjct: 239 LIPTAEVPITNLFRDETIDLSDGTISFTAYTPCFRSEAGSYGKDVRGMIRQHQFQKVELV 298 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 R EDS EHE++ AE +L+RL L YR + LCTGD+GFS+ KTYDLEVW+ GQ Y Sbjct: 299 KFARPEDSSAEHEKLTRDAESVLERLGLPYRRMLLCTGDMGFSSSKTYDLEVWVPGQETY 358 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 REISSCS +FQ+RR N RY+ S +F HTLNGSG+AVGR +AILENY ADGSV Sbjct: 359 REISSCSNFESFQARRANIRYKPAGSNKTEFVHTLNGSGLAVGRTYLAILENYQQADGSV 418 Query: 408 TIPTVLRPYMNNLAVIKKE 426 IP L+PYM VI K+ Sbjct: 419 RIPDALQPYMGGETVITKQ 437 >gi|29654491|ref|NP_820183.1| seryl-tRNA synthetase [Coxiella burnetii RSA 493] gi|161831204|ref|YP_001597051.1| seryl-tRNA synthetase [Coxiella burnetii RSA 331] gi|730878|sp|P39919|SYS_COXBU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083566|sp|A9NDR1|SYS_COXBR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|468532|emb|CAA53292.1| serine--tRNA ligase [Coxiella burnetii] gi|29541758|gb|AAO90697.1| seryl-tRNA synthetase [Coxiella burnetii RSA 493] gi|161763071|gb|ABX78713.1| seryl-tRNA synthetase [Coxiella burnetii RSA 331] Length = 423 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 261/424 (61%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +RQN EH+ L++R E S+ L L+ K + I+ + +RN S IG Sbjct: 1 MLDPKILRQNLEHVVEKLRRRGFEMDSDTFLQLENKRKEAQLAIQSFQTKRNQLSKTIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G + L E S L ++L E + + IPN+P + VP G S N Sbjct: 61 AKSKGENPEL--LMAEVSQLNDELKQEEANFETIQKAFSDFQLAIPNLPHDSVPDGKSEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G P ++H +GE +DF+ A KLSGARF VL G LA RAL Q Sbjct: 119 DNREIRQWGAPPGFDFTPKDHTVLGERDNQLDFEAAAKLSGARFVVLRGSLARAHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+DLHT +HGY EV P LV +E +YGTGQ+PKF ++ F +L+PT EV L N Sbjct: 179 FMLDLHTDQHGYEEVYVPYLVHEECLYGTGQLPKFREEQFQVAGDRNFFLVPTGEVPLVN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L EIIE+ +LP ++ P FRSEAGS G+D RGM+RQHQF K ELV + + E+S+ Sbjct: 239 LARDEIIEAPALPKKWVAQTPCFRSEAGSYGKDVRGMIRQHQFQKVELVQLVQPENSYQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE++L+ L L YRVV LC GDLGF+A KTYDLEVWL QN YREISSCS C + Sbjct: 299 LEEITRQAEKVLQLLALPYRVVELCAGDLGFAAAKTYDLEVWLPSQNKYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +R+R+P + + HTLNGSG+AVGR L+A++ENY ADG + +P L+ YM Sbjct: 359 FQARRIQARWRNPKTGKPELLHTLNGSGLAVGRTLVAVMENYQQADGHIRVPDALKSYMG 418 Query: 419 NLAV 422 + Sbjct: 419 GVDY 422 >gi|114565586|ref|YP_752740.1| Serine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122319230|sp|Q0B0Y5|SYS_SYNWW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|114336521|gb|ABI67369.1| seryl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 427 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 203/426 (47%), Positives = 272/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + I+ N ++ L+KR L + L+LDE+ R ++ ++E+ + RN++S QIG+ Sbjct: 1 MLDAKLIKANAALVEQQLEKRGLSGVLKPFLALDEERRKILVQVEERKNFRNNSSQQIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG L E +Q+ L++E V ++K++ IPN+P E VP+G Sbjct: 61 MKKEGLNP--ADLMEEVRQAGQQIKELDEELARVEKEIEKILLNIPNLPHESVPVGEDEK 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +R G+ + H++IG AL ++DF+RA KLSGARF+V G A LERA+ Sbjct: 119 SNQEVRRWGEPRQFNFEPQAHWDIGPALDILDFERAAKLSGARFTVYKGAGARLERAVIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 F +D+H EHGY E+ P +V + M GTGQ+PKFA+DMF +LIPT+EV LTNL Sbjct: 179 FYLDIHCGEHGYREILPPFMVIADCMVGTGQLPKFAEDMFKLEGKDMYLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+E+K LP T P FR+EAGS GRDTRG++RQHQF K ELV + ++S+ E Sbjct: 239 YREEILEAKDLPFYLTAYTPCFRAEAGSHGRDTRGVIRQHQFNKVELVKLCEPQNSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AE +L+ L L YRVV L TGD+GFSA KTYD+EVW+ G YREISSCS C +F Sbjct: 299 EKLTKDAERVLQLLGLPYRVVVLSTGDMGFSAAKTYDIEVWMPGYQDYREISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYR L++ HTLNGSGVA+GR + AILENY DGSV IP VLRPYM Sbjct: 359 QARRANIRYRPDPKAKLQYVHTLNGSGVAIGRTVAAILENYQQEDGSVIIPEVLRPYMGG 418 Query: 420 LAVIKK 425 L I + Sbjct: 419 LEKINR 424 >gi|194397764|ref|YP_002037092.1| seryl-tRNA synthetase [Streptococcus pneumoniae G54] gi|238690854|sp|B5E7F2|SYS_STRP4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|194357431|gb|ACF55879.1| seryl-tRNA synthetase [Streptococcus pneumoniae G54] Length = 424 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 273/427 (63%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILIKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADX 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 XXNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSATKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|319399907|gb|EFV88153.1| seryl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 428 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 196/427 (45%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + ++ R +P+ + +L LDE+ R LI K E+++A+RN S +I Sbjct: 1 MLDIRLFRNEPEKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L +++ ++ + +EV + ++ ++ IPN+ E+VP G S Sbjct: 61 QKKR--NKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGASD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DF+RA K+SGARF LT A LERAL Sbjct: 119 EENVEVKKWGTPRDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +M+ HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP FT FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 239 FYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ LDL YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTQNAEAILEELDLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG++TIP L P+M Sbjct: 359 FQARRANIRFKRDAASKPELVHTLNGSGLAVGRTFAAIVENYQNEDGTLTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I+K Sbjct: 419 GKTKIEK 425 >gi|320547963|ref|ZP_08042245.1| serine--tRNA ligase [Streptococcus equinus ATCC 9812] gi|320447387|gb|EFW88148.1| serine--tRNA ligase [Streptococcus equinus ATCC 9812] Length = 425 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 269/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + + LD+K R L+ K E +A RN+ SA I Sbjct: 1 MLDIKRIRNDFDEVAKKLATRGVAAEKLAELKELDDKRRELLIKSESAKAERNTASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N L + + E E+ L + + +PN+P +VP+G Sbjct: 61 QAKR--NKEDASEQITAMQKLSADIKTTDTELAEIDEKLSEFTATLPNIPAADVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE L ++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPREFNFDIKAHWDLGEDLDILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 238 YYRGEILDGKELPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPETSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVVNAENILQKLGLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 + VI + Sbjct: 418 GVDVISPK 425 >gi|312142431|ref|YP_003993877.1| seryl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] gi|311903082|gb|ADQ13523.1| seryl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] Length = 422 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 190/419 (45%), Positives = 272/419 (64%), Gaps = 3/419 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+NPE ++ + KR+++ DEK R L+ + E ++ +RN NS +IG+ Sbjct: 1 MLDMRFIRENPELVEESFAKRNMDSIIPEFQKFDEKRRDLLYEAEQLKHKRNVNSDKIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L +E + ++ L+++ EV L ++ IPN+P + VP+G+ Sbjct: 61 LKRNG--EDASELISEMQEVSSRIKELDQKIAEVEEKLDCVLLSIPNIPHQSVPVGSDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R+ G+ P + H+EIGE L ++DF++ K++G+RF+ L G A LER+L Sbjct: 119 DNKEVRTWGEPPEFDFDFKAHWEIGEDLDILDFEKGAKVTGSRFTFLKGAAARLERSLVN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+D HT+EH Y EV P + ++M GTGQ+PKF DMF +LIPT+EV +TN+ Sbjct: 179 FMLDYHTAEHDYEEVFPPFIANADSMTGTGQLPKFKKDMFKLEGLDYYLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y +I+E + LP + FR+EAG+ GRDTRG++RQHQF K E+V + +DS+ E Sbjct: 239 YRDQIMEPQELPKYLCAYSACFRAEAGAHGRDTRGIIRQHQFNKVEMVKFVKPDDSYQEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AE+IL++L L YRVV+LCTGDL FS+ KTYDLEVW+ YREISSCS +F Sbjct: 299 EKITADAEDILQQLGLPYRVVTLCTGDLTFSSAKTYDLEVWMPAYETYREISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RR RYR S +F HTLNGSG+A+GR L AILENY N DGSVT+P VLRPYM Sbjct: 359 QARRAGIRYRPDPDSSTEFVHTLNGSGLAIGRTLAAILENYQNEDGSVTVPEVLRPYMG 417 >gi|161349959|ref|YP_047472.2| seryl-tRNA synthetase [Acinetobacter sp. ADP1] gi|146345523|sp|Q6F8G5|SYS_ACIAD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase Length = 423 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 189/425 (44%), Positives = 268/425 (63%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E +++AL KR ++ SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 1 MIDPKLLRNNIEAVNLALAKRGVQLDPTEWASLEVRRKELQSKTESLQAERNAGAKQVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G N Sbjct: 61 IKKAGG--DASEIMTRMQAIGDEIKAAEVALAELQAEIEQKALSIPNLPDESVPEGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 119 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII+++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + EDS Sbjct: 239 FVRDEIIDAERLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPEDSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE IL+ L L YR + LC GD+GF + KTYDLEVW+ QN YREISSCS G+ Sbjct: 299 LEELTGHAEGILQALGLPYRKILLCGGDMGFGSTKTYDLEVWVPSQNTYREISSCSNMGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY ADG++ +P VLRPYM Sbjct: 359 FQARRMMARYRT-DQKKTELVHTLNGSGLAVGRTLLAVMENYQRADGAIEVPEVLRPYMG 417 Query: 419 NLAVI 423 I Sbjct: 418 GATYI 422 >gi|169832533|ref|YP_001693918.1| seryl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|238688320|sp|B1I9K5|SYS_STRPI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|168995035|gb|ACA35647.1| seryl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] Length = 424 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 275/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKKIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|229547035|ref|ZP_04435760.1| seryl-tRNA synthetase [Enterococcus faecalis TX1322] gi|256855074|ref|ZP_05560435.1| seryl-tRNA synthetase [Enterococcus faecalis T8] gi|307291565|ref|ZP_07571441.1| seryl-tRNA synthetase [Enterococcus faecalis TX0411] gi|229307963|gb|EEN73950.1| seryl-tRNA synthetase [Enterococcus faecalis TX1322] gi|256709587|gb|EEU24634.1| seryl-tRNA synthetase [Enterococcus faecalis T8] gi|306497326|gb|EFM66867.1| seryl-tRNA synthetase [Enterococcus faecalis TX0411] gi|315028722|gb|EFT40654.1| seryl-tRNA synthetase [Enterococcus faecalis TX4000] Length = 423 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 204/425 (48%), Positives = 278/425 (65%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN E + LK R ++ + L+LDE+ R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEERRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R + + H+EIGEALG++DF+R K+SG+RF G A LERA+ Sbjct: 119 AANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H +EHGYTEV P LV +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI++++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILDAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM+ Sbjct: 359 FQARRALIRYRDKTG-HVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMS 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|19746699|ref|NP_607835.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|50914823|ref|YP_060795.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|30173174|sp|Q8NZN7|SYS_STRP8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67461685|sp|Q5XAF1|SYS_STRP6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|19748923|gb|AAL98334.1| putative seryl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|50903897|gb|AAT87612.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10394] Length = 425 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 268/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + ++ LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDTVAAKLKNRGVSEDTLTHLKELDEKRRTLLVQSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + + + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDATQQIADMQKVSADIKTIDNQLVAIDQQVADIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV+SLCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|315574025|gb|EFU86216.1| seryl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315581976|gb|EFU94167.1| seryl-tRNA synthetase [Enterococcus faecalis TX0309A] Length = 423 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 203/425 (47%), Positives = 276/425 (64%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN E + LK R ++ + L+LDE R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEGRRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R + + H+EIGEALG++DF+R K+SG+RF G A LERA+ Sbjct: 119 AANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H +EHGYTEV P LV +A++GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVNEHGYTEVIPPYLVNSKAIFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI++++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILDAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM Sbjct: 359 FQARRALIRYRDKTG-HVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|322391441|ref|ZP_08064910.1| serine--tRNA ligase [Streptococcus peroris ATCC 700780] gi|321145524|gb|EFX40916.1| serine--tRNA ligase [Streptococcus peroris ATCC 700780] Length = 424 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 276/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + +D K R ++ K+E +++ RN+ SA+I Sbjct: 1 MLDIKRIRTDFDTVAKKLATRGVAAATLNEMKEIDAKRRDILVKVETLKSERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L + L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENADDKITAMQALSADIKSLDAELTEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ +R G + H+++GEALG++D++R K++GARF G A LERA+ Sbjct: 119 NDNVEVRRWGTPRDFSFDVKAHWDLGEALGILDWERGAKVTGARFLFYKGLGAKLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELSDTNYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVGNAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 + VI+ Sbjct: 418 GVDVIRP 424 >gi|323463210|gb|ADX75363.1| seryl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 426 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 191/427 (44%), Positives = 272/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + + R ++P + +L+LD++ R I++ E+++A RN S QI Sbjct: 1 MLDIKLFRNEPERVKEKIALRQMDPSVVDEVLALDQQRRDYIQQTEELKAERNKASQQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + DA+K + + E++ ++ + E + L ++S IPN+ ++VP G Sbjct: 61 EKKRNKENAD-DAIKAQ-REVGEKIKNIDAQLKETDTKLNDILSRIPNLIHDDVPEGEDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ ++ G ++ H+++ E+L + DFDRA ++SGARF LT A LERAL Sbjct: 119 SDNVELKRWGTPREFDFEAKAHWDLVESLEMADFDRAARVSGARFVYLTNDGAKLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FMI +HT++HGY E+ P LV +AMYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NFMITMHTTQHGYREMMVPQLVNAKAMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 239 YYRDEIVQPGVLPAKFTGQSACFRSEAGSAGRDTRGLIRLHQFNKVEMVRIEKPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M S AE IL+ L+L YR V LCTGD+GF A KTYDLEVWL + Y+EISSCS C + Sbjct: 299 LEEMTSNAEAILEALNLPYRRVILCTGDIGFGASKTYDLEVWLPSYSDYKEISSCSNCVD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ ++ HTLNGSG+AVGR AI+ENY N DG++T+P L P+M Sbjct: 359 FQARRANIRFKRDKDAKPEYAHTLNGSGLAVGRTFAAIVENYQNEDGTITVPEALVPFMG 418 Query: 419 NLAVIKK 425 VIK Sbjct: 419 GQTVIKP 425 >gi|289208071|ref|YP_003460137.1| seryl-tRNA synthetase [Thioalkalivibrio sp. K90mix] gi|288943702|gb|ADC71401.1| seryl-tRNA synthetase [Thioalkalivibrio sp. K90mix] Length = 429 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 191/427 (44%), Positives = 265/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +RQ+ + AL R E E SL+ + + L + ++++ RN+ S IGQ Sbjct: 1 MLDIRSLRQDLDATVAALASRGFELDRERFESLEARRKALQVRTQELQNERNTRSKGIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ LK E L ++L E + V L L+ IPN+P ++VP+G Sbjct: 61 AKARG--EDIEPLKAEVGRLGDELKQCEADLQAVQQELDALLMRIPNLPQQDVPVGKDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G R+H ++G G +DF+ A +++G+RF V+ G +A L RAL Q Sbjct: 119 SNVELRREGTPREFDFAPRDHVDLGLPGGWLDFEAAVRVAGSRFVVMRGEMARLHRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--CTTDGRWLIPTSEVSLTN 238 FM+DLHT +HGY E P L E++ GTGQ+PKF +D+F LIPT+EV+LTN Sbjct: 179 FMLDLHTQQHGYQETYVPYLANPESLEGTGQLPKFDEDLFSVDCDQRFRLIPTAEVTLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L +I+E+ +LPL+ T P FRSEAGS GRD RG++RQHQF K ELV + E S Sbjct: 239 LVREQILEAGALPLKMTAHTPCFRSEAGSYGRDVRGLIRQHQFEKVELVQVVHPEQSEAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E +L AE +L+ L+L YRV+ L TGD+GF+A +TYDLEVWL GQ YREISSCS Sbjct: 299 LEELLGHAEAVLQALELPYRVMLLSTGDMGFAAARTYDLEVWLPGQQAYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R + HT+NGSGVAVGR L+A+LEN+ ADGS+ IP LRPY+ Sbjct: 359 FQARRMQARFRPQAGGKPELVHTINGSGVAVGRALVALLENHQQADGSIAIPERLRPYLG 418 Query: 419 NLAVIKK 425 +++K Sbjct: 419 GTSLLKP 425 >gi|306832797|ref|ZP_07465932.1| serine--tRNA ligase [Streptococcus bovis ATCC 700338] gi|304425032|gb|EFM28163.1| serine--tRNA ligase [Streptococcus bovis ATCC 700338] Length = 435 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 200/428 (46%), Positives = 270/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + + LD+K R L+ K E +A RN+ SA I Sbjct: 11 MLDIKRIRNDFDEVAKKLATRGVAAEKLVELKELDDKRRELLVKSESAKAERNTASAAIA 70 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N L + + E E+ L + + +PN+P +VP+G Sbjct: 71 QAKR--NKEDASEQIAAMQKLSADIKANDAELAEIDDKLAEFTTTLPNIPAADVPVGADE 128 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 129 DENVEVRRWGTPRDFDFDIKAHWDLGEDLGILDWERGAKVTGSRFLFYKGLGARLERAIY 188 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 189 NFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSDYVLIPTAEVPLTN 247 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 248 YYRGEILDGKELPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPETSYDE 307 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M++ AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 308 LEKMVANAENILQKLGLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 367 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 368 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 427 Query: 419 NLAVIKKE 426 VI + Sbjct: 428 GAEVISPK 435 >gi|49531938|emb|CAG69650.1| seryl-tRNA synthetase ; also charges selenocystein tRNA with serine [Acinetobacter sp. ADP1] Length = 425 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 189/425 (44%), Positives = 268/425 (63%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E +++AL KR ++ SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 3 MIDPKLLRNNIEAVNLALAKRGVQLDPTEWASLEVRRKELQSKTESLQAERNAGAKQVGQ 62 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G N Sbjct: 63 IKKAGG--DASEIMTRMQAIGDEIKAAEVALAELQAEIEQKALSIPNLPDESVPEGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 121 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 181 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII+++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + EDS Sbjct: 241 FVRDEIIDAERLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPEDSMQA 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE IL+ L L YR + LC GD+GF + KTYDLEVW+ QN YREISSCS G+ Sbjct: 301 LEELTGHAEGILQALGLPYRKILLCGGDMGFGSTKTYDLEVWVPSQNTYREISSCSNMGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR + K + HTLNGSG+AVGR L+A++ENY ADG++ +P VLRPYM Sbjct: 361 FQARRMMARYRT-DQKKTELVHTLNGSGLAVGRTLLAVMENYQRADGAIEVPEVLRPYMG 419 Query: 419 NLAVI 423 I Sbjct: 420 GATYI 424 >gi|168482647|ref|ZP_02707599.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|172043721|gb|EDT51767.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|332077694|gb|EGI88155.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA41301] gi|332203581|gb|EGJ17648.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA47368] Length = 424 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 275/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREISSCSNAED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|19713538|gb|AAL94319.1| Seryl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 424 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 198/425 (46%), Positives = 274/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + + LD K R ++ ++E+++ RN+ SA+I Sbjct: 4 MLELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNASAEIAN 63 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + D + + + ++ L+ E E+ +K + IPNV PIG + Sbjct: 64 LKKEKKNA--DHIIEKMGEVSTKIKDLDAELVEIDEKIKDIQLNIPNVYHPSTPIGPDED 121 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G + H++IGE LG++DF+R KLSG+RF + G A LERA+ Sbjct: 122 YNLEIRKWGIPKKFDFEPKSHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERAIIN 181 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 182 FMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 241 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E Sbjct: 242 RKEILEQAELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDELE 301 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 302 KMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 361 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR PN +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM + Sbjct: 362 ARRMGLKYRVPNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGV 419 Query: 421 AVIKK 425 VIKK Sbjct: 420 DVIKK 424 >gi|89092930|ref|ZP_01165882.1| seryl-tRNA synthetase [Oceanospirillum sp. MED92] gi|89082955|gb|EAR62175.1| seryl-tRNA synthetase [Oceanospirillum sp. MED92] Length = 424 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 191/426 (44%), Positives = 270/426 (63%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R NP+ + LKK+ E L+ + + L E+++ RN+ S IG+ Sbjct: 1 MLDAKFVRANPQDVAQLLKKKGFEFPVAQFEELENQRKQLQVDTENLQNERNTRSKGIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E + L +L + + + V L+ L+S +PN+P +EVP G Sbjct: 61 AKAAG--EDIQPLLAEVADLGSKLDAAKADLNAVQEKLEDLLSGVPNIPSDEVPEGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI +R G ++H +GE G +DF+ A KL+GARFSV+TG LA L RAL Q Sbjct: 119 DNIEVRRWGTPREFDFEPQDHVALGEKSGELDFETAAKLTGARFSVMTGKLARLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSLT 237 FM+ + T EHGYTE P +V ++++ GTGQ+PKF +D+F +LIPT+EV +T Sbjct: 179 FMLHVQTEEHGYTEAYVPYMVNEDSLRGTGQLPKFGEDLFKVPFGDRQYYLIPTAEVPVT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+ EI+E LP++FT P FRSEAGS+GRDTRGM+RQHQF K E+V I S+ Sbjct: 239 NVVRDEIVEGDQLPIKFTAHTPCFRSEAGSSGRDTRGMIRQHQFEKVEMVQIVEPSKSWE 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M + AE IL++L+L YRVV+LC GDLGFS+ KTYD+EVWL GQ+ +REISS S Sbjct: 299 ALEEMTNNAEVILQKLNLPYRVVTLCGGDLGFSSAKTYDIEVWLPGQDKFREISSISNMT 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR+ +R+R+P + + HTLNGSG+AVGR L+A++ENY A+G + IP L+ YM Sbjct: 359 DFQARRLKARWRNPETGKPELVHTLNGSGLAVGRTLLAVMENYQTAEGKIQIPEALQSYM 418 Query: 418 NNLAVI 423 I Sbjct: 419 GGKTEI 424 >gi|319893732|ref|YP_004150607.1| Seryl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317163428|gb|ADV06971.1| Seryl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] Length = 426 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 191/427 (44%), Positives = 272/427 (63%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + + R ++P + +L+LD++ R I++ E+++A RN S QI Sbjct: 1 MLDIKLFRNEPERVKEKIALRQMDPSVVDEVLALDQQRRDYIQQTEELKAERNKASQQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + DA+K + + E++ ++ + E + L ++S IPN+ ++VP G Sbjct: 61 EKKRNKENAD-DAIKAQ-REVGEKIKNIDAQLKEADTKLNDILSRIPNLIHDDVPEGEDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ ++ G ++ H+++ E+L + DFDRA ++SGARF LT A LERAL Sbjct: 119 SDNVELKRWGTPREFDFEAKAHWDLVESLEMADFDRAARVSGARFVYLTNDGAKLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FMI +HT++HGY E+ P LV +AMYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NFMITMHTTQHGYREMMVPQLVNAKAMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 239 YYRDEIVQPGVLPAKFTGQSACFRSEAGSAGRDTRGLIRLHQFNKVEMVRIEKPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M S AE IL+ L+L YR V LCTGD+GF A KTYDLEVWL + Y+EISSCS C + Sbjct: 299 LEEMTSNAEAILEALNLPYRRVILCTGDIGFGASKTYDLEVWLPSYSDYKEISSCSNCVD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ ++ HTLNGSG+AVGR AI+ENY N DG++T+P L P+M Sbjct: 359 FQARRANIRFKRDKDAKPEYAHTLNGSGLAVGRTFAAIVENYQNEDGTITVPEALVPFMG 418 Query: 419 NLAVIKK 425 VIK Sbjct: 419 GQTVIKP 425 >gi|149007999|ref|ZP_01831556.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|225856139|ref|YP_002737650.1| seryl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|225858264|ref|YP_002739774.1| seryl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|254783048|sp|C1C5E8|SYS_STRP7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783496|sp|C1CIR2|SYS_STRZP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|147760511|gb|EDK67487.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|225721092|gb|ACO16946.1| seryl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|225725287|gb|ACO21139.1| seryl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|332076855|gb|EGI87317.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA17545] gi|332204437|gb|EGJ18502.1| seryl-tRNA synthetase [Streptococcus pneumoniae GA47901] Length = 424 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 274/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV L N Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLAN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|289765941|ref|ZP_06525319.1| seryl-tRNA synthetase [Fusobacterium sp. D11] gi|289717496|gb|EFD81508.1| seryl-tRNA synthetase [Fusobacterium sp. D11] Length = 424 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 272/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + + LD K R ++ ++E+++ RN+ SA+I Sbjct: 4 MLELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNVSAEIAN 63 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E L + + ++ L+ E E+ +K + IPNV PIG N Sbjct: 64 LKKEKK--DASHLIEKMGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDEN 121 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G+ + H++IGE LG++DF+R KLSG+RF + G A LERAL Sbjct: 122 YNLEIRKWGEPKKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALIN 181 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 182 FMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 241 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E Sbjct: 242 RKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAESSYDELE 301 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M+ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 302 KMVKNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 361 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR PN +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM + Sbjct: 362 ARRMGLKYRVPNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGV 419 Query: 421 AVIKK 425 VIKK Sbjct: 420 DVIKK 424 >gi|217976773|ref|YP_002360920.1| seryl-tRNA synthetase [Methylocella silvestris BL2] gi|254783037|sp|B8ELG9|SYS_METSB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|217502149|gb|ACK49558.1| seryl-tRNA synthetase [Methylocella silvestris BL2] Length = 461 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 249/446 (55%), Positives = 303/446 (67%), Gaps = 21/446 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR NPE D K+R LEP + +L LD+ R I K++ + RRN+ S +IGQ Sbjct: 1 MYDIKWIRDNPEVFDQGRKRRGLEPLAARLLELDDARRGAIAKLQVAQERRNAASKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A + + DAL E S LK LP LE E + L K +S IPN+PLEEVP G N Sbjct: 61 AMAAKDQAKADALMAEVSALKRDLPELEAAERAAAALLDKALSEIPNLPLEEVPFGRDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + G+KP EH+E+GE LGLMDF+ A KLSGARF V G LA LERALG Sbjct: 121 DNREHHTFGEKPRFSFDPAEHYELGETLGLMDFETAAKLSGARFVVNKGPLARLERALGA 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------------- 224 FM+DLHT EHGYTEV+ P+LVRD+AM+GT Q+PKF +D F Sbjct: 181 FMLDLHTGEHGYTEVNPPILVRDDAMFGTAQLPKFENDQFWARPGAHPLLIDMFGREEAE 240 Query: 225 -----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 WLIPT+EV LTNL I++ K LPLRFT P FR+EAGSAGRDTRGM+RQH Sbjct: 241 EMKKNRLWLIPTAEVPLTNLVRESILDEKQLPLRFTASTPCFRAEAGSAGRDTRGMIRQH 300 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K ELVSIT E + EHERMLSCAEE+LKRL L YRVV+LCTGD+GF++ KTYD+EV Sbjct: 301 QFTKVELVSITTPEQALAEHERMLSCAEEVLKRLKLPYRVVTLCTGDMGFASQKTYDIEV 360 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 WL GQ+ YREISS S CG+FQ+RRMN+RYR +K+ +F HTLNGSGVAVGR L+A+LEN Sbjct: 361 WLPGQDRYREISSVSVCGDFQARRMNARYRPEGAKNTRFVHTLNGSGVAVGRALVAVLEN 420 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKK 425 Y DGS+ +P L PYM + I+K Sbjct: 421 YQTEDGSIIVPDALAPYMGGITRIEK 446 >gi|304437508|ref|ZP_07397466.1| serine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369558|gb|EFM23225.1| serine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 423 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 188/425 (44%), Positives = 274/425 (64%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + LK R L+E+ R +++ +E+ +ARRN+ S ++G Sbjct: 1 MLDMKFVRENLPAVQEMLKHRCNTLDLSPFTELEERRRRILQDVEEKKARRNAVSKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G D + E TL +++ L+++ +V L+ L+ IPN+P +VPIG Sbjct: 61 RKKAG--ENADEIVAEMRTLGDEIAALDEDLRDVELRLRGLLLQIPNMPRADVPIGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G + + H++IG+ALG++D +RA K++GARF+ G A LERA Sbjct: 119 ENPEVRRCGTPRTFDFTPKAHWDIGDALGILDAERAAKVTGARFTFYKGLGARLERACIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLH +HGYTE+ AP +V + +M GTGQ+PKFA+DMF +L+PT+EV TN Sbjct: 179 FMMDLHAEKHGYTEMLAPYIVNEASMIGTGQLPKFAEDMFKLEGLDYYLVPTAEVPTTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++++ LP +T+ FR+EAGSAGRDTRG++RQHQF K EL+ E S+ E Sbjct: 239 HRDEILDAEQLPEYYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVTPETSWDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M++ AE++LK L+L YRV+ LCTGD+ F++ KTYD+EVW+ Q+ YREISSCS C ++ Sbjct: 299 ESMVTAAEDVLKILELPYRVIQLCTGDMSFTSAKTYDIEVWMPAQDKYREISSCSNCTDY 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR F HTLNGSG+AVGR + AILEN DGSV +P L PYM+ Sbjct: 359 QARRANIKYRPARGAKPTFLHTLNGSGLAVGRTVAAILENNQQEDGSVIVPKALVPYMHG 418 Query: 420 LAVIK 424 + VI+ Sbjct: 419 VTVIR 423 >gi|149377438|ref|ZP_01895181.1| seryl-tRNA synthetase [Marinobacter algicola DG893] gi|149358279|gb|EDM46758.1| seryl-tRNA synthetase [Marinobacter algicola DG893] Length = 424 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 192/426 (45%), Positives = 269/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R E + L + L+E+ R + K E ++ +N S IG+ Sbjct: 1 MLDPKRVRTQTEEIARRLAIKGYTFDKATFDQLEERRRAIQVKTETLQGEQNRRSKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L +E LK+Q E E + L ++ IPN+P + VP G S + Sbjct: 61 AKAAG--EDIQPLLDEVEDLKKQKSEAEDELRVLQEELNHFLASIPNLPDDTVPAGESED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H +GEALG +DF+ AT+L+ +RF+V+ G +A L RAL Q Sbjct: 119 DNVEVRRWGTPKHFDFEPKDHVALGEALGGLDFETATRLAHSRFAVMRGPVARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FMI+LHT EH YTE P LV + ++GTGQ+PKF +D+F +LIPT+EV TN Sbjct: 179 FMINLHTDEHAYTEAYVPYLVNADTLFGTGQLPKFEEDLFRMDGEKPLYLIPTAEVPATN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L S+ I+++ LPL+ P FRSEAGS GRDTRGM+RQHQF K ELV + R EDS Sbjct: 239 LVSNTILDAAELPLKLVCHTPCFRSEAGSYGRDTRGMIRQHQFDKVELVQVVRPEDSEAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE++L+ L+L YR+V LC GD+GF+A +TYD+EVWL GQ+ YREISSCS + Sbjct: 299 LEALTGHAEKVLQLLELPYRLVDLCGGDMGFAAARTYDIEVWLPGQDKYREISSCSNARD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM++R+R+P + + HTLNGSG+AVGR LIA++ENY ADGS+ +P VL+PYM Sbjct: 359 FQARRMHARWRNPETNKPEPVHTLNGSGLAVGRALIAVMENYQQADGSILVPEVLKPYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GVDRIQ 424 >gi|332527970|ref|ZP_08404004.1| seryl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] gi|332112544|gb|EGJ12337.1| seryl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] Length = 430 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 191/434 (44%), Positives = 273/434 (62%), Gaps = 14/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ + L+KR E +L+ + + + + ED++ARRN S Q Sbjct: 1 MLDITLLRRDLASVVARLEKRRAPQPFLDVERFTALEAERKRIQTRTEDLQARRNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQA G AL E + ++ + + + L++++ IPN+P + VP+G Sbjct: 61 IGQAKGRG--EDASALMAEVGGIGDEQKAGAERLEAIQAELQQMLMSIPNLPQDSVPVGA 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N+ +R G + ++H ++G+ LG +DFD +L+GARF+ L G A L RA Sbjct: 119 DESGNVELRRWGTPRTFEFTPKDHVDVGQPLG-LDFDTGARLAGARFTFLRGPAARLHRA 177 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------TDGRWLIP 230 L QFM+D T EHGYTE P +V E + GTGQ+PKF +DMF ++LI Sbjct: 178 LAQFMLDTQTQEHGYTECWTPYIVNREVLEGTGQLPKFKEDMFWVLRGGDEEQREQYLIS 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 TSE+ LTN +I+++ +LP++ T +P FRSEAGSAGRDTRGM+RQHQF K E+V I Sbjct: 238 TSEIPLTNTVREQILDAAALPIKLTAHSPCFRSEAGSAGRDTRGMIRQHQFDKVEMVQIV 297 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 R EDS E+M+ AE IL++L+L YRV++LC+GD+GF + KTYDLEVWL Q YREI Sbjct: 298 RPEDSDAALEQMVGHAEAILQKLELPYRVITLCSGDMGFGSAKTYDLEVWLPAQGTYREI 357 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS C FQ+RRM +R+R+ K +F HTLNGSG+AVGR L+A+LEN+ ADGS+ +P Sbjct: 358 SSCSNCEAFQARRMQARFRNAQGK-TEFVHTLNGSGLAVGRALVAVLENHQQADGSIRVP 416 Query: 411 TVLRPYMNNLAVIK 424 LRPY+ +++ Sbjct: 417 AALRPYLGGAEILR 430 >gi|225853986|ref|YP_002735498.1| seryl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|254783495|sp|C1CCH7|SYS_STRZJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|225723288|gb|ACO19141.1| seryl-tRNA synthetase [Streptococcus pneumoniae JJA] Length = 424 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 275/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+GT Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGTDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFS KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSTAKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|329767690|ref|ZP_08259209.1| seryl-tRNA synthetase [Gemella haemolysans M341] gi|328839040|gb|EGF88628.1| seryl-tRNA synthetase [Gemella haemolysans M341] Length = 426 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 191/428 (44%), Positives = 269/428 (62%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R NPE + L R+LE + ++ LD+K R L+ ++ED++A RN S +I Sbjct: 1 MLDIKLFRANPEMVKAKLAARNLETDVVDLLIDLDKKRRELLVQVEDLKALRNKKSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + +++ + E ++ + + I IPN+ +E PIG + Sbjct: 61 ILKR--KREDASDVIAEMKHVSDEITTRDIEVKQIAEEINEKIIRIPNLISDETPIGENE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +ENI +R +G+ + H+++ E L + DF+RA K+SG+RF A LERAL Sbjct: 119 DENIEVRRIGQVREFDFEPKAHWDLVEELDIADFERAAKISGSRFVFYKKAGAMLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FMID H EHGY E P LV A++GTGQ PKF +D++ LIPT+EV LTN Sbjct: 179 NFMIDTHVVEHGYEEFMVPQLVNRTALFGTGQFPKFVEDVYTVESEGLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI+ LP T + FRSEAGSAGRDTRG++R HQF K E+V + E+S+ + Sbjct: 239 YYNGEILTEDMLPKGVTAFSICFRSEAGSAGRDTRGLIRLHQFNKVEMVRFAKPENSYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE ILK+L+L YRV++LC+GD GFS+ KTYD+EVWL N Y+EISSCS C + Sbjct: 299 LEIMTGHAESILKKLNLPYRVITLCSGDTGFSSAKTYDIEVWLPSYNAYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ ++ ++F HTLNGSG+AVGRCL AI+ENY N DGS+T+P VLRPYM Sbjct: 359 FQARRANMRFKREDTGKIEFVHTLNGSGLAVGRCLAAIIENYQNEDGSITVPEVLRPYMR 418 Query: 419 NLAVIKKE 426 + I+++ Sbjct: 419 GITKIERD 426 >gi|294784673|ref|ZP_06749961.1| serine--tRNA ligase [Fusobacterium sp. 3_1_27] gi|294486387|gb|EFG33749.1| serine--tRNA ligase [Fusobacterium sp. 3_1_27] Length = 424 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 273/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + + LD K R ++ ++E+++ RN+ SA+I Sbjct: 4 MLELKFMRENVEMLKEMLKNRNSNVDMDTFVELDSKRREILSEVENLKRERNNVSAEIAN 63 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + L + + ++ L+ E E+ +K + IPNV PIG + Sbjct: 64 LKKEKK--DANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHSSTPIGPDED 121 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G + H++IGE LG++DF+R KLSG+RF + G A LERAL Sbjct: 122 YNLEIRKWGVPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAARLERALIN 181 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 182 FMLDVHTLEEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 241 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E Sbjct: 242 RKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDELE 301 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 302 KMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 361 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR PN +F HTLNGSG+AVGR L+AI+ENY DGS IP VL PYM + Sbjct: 362 ARRMGLKYRVPNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLIPKVLIPYMGGV 419 Query: 421 AVIKK 425 VIKK Sbjct: 420 DVIKK 424 >gi|225869921|ref|YP_002745868.1| seryl-tRNA synthetase [Streptococcus equi subsp. equi 4047] gi|254783047|sp|C0M858|SYS_STRE4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|225699325|emb|CAW92703.1| seryl-tRNA synthetase [Streptococcus equi subsp. equi 4047] Length = 425 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 271/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + E + +LDE+ R L+ + E+++A+RN SA I Sbjct: 1 MLDLKRIRTDFDTVAAKLKTRGVSEAILTSLKALDEQRRTLLVQTEELKAQRNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + L + ++ + ++ + +I+ +PN P + VPIG Sbjct: 61 QAKRQ--KEDASQQIADMQQLAANIKAIDAKLADIDQEITGIITVLPNTPHDSVPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ I GK + H+++GEAL ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIHRWGKPRQFDFDIKAHWDLGEALDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F ++ IPT+EV LTN Sbjct: 179 NFMLDEHLKE-GYQEIIPPYMVNHDSMFGTGQYPKFKEDTFELDGTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +II+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 238 YYRGDIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPETSYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAEHILQKLKLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VIK Sbjct: 418 GLEVIKPR 425 >gi|240850247|ref|YP_002971640.1| seryl-tRNA synthetase [Bartonella grahamii as4aup] gi|240267370|gb|ACS50958.1| seryl-tRNA synthetase [Bartonella grahamii as4aup] Length = 425 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 247/424 (58%), Positives = 313/424 (73%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR NPE LD AL R LEPQ+E ++ LD R I K++ + RRN+ S +IGQ Sbjct: 1 MLDIKWIRDNPEKLDKALVSRGLEPQAERLIQLDLARRSHIAKVQLAQERRNAVSKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A + ++ + E +K L EE ++ SL+K++S +PN+PL++VP G + Sbjct: 61 ALAVSDQQKAESFRAEGEEIKIFLSSATAEEKQLTESLEKILSALPNIPLDDVPEGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++IR G P+ +EHF++G+ L M+F+RA++LSG RF+VL+G LA LERALGQ Sbjct: 121 DNVVIRHFGTPPTFNFTPKEHFDLGQNLKQMNFERASRLSGTRFTVLSGALARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+H +EHGYTEVS P LVRDE +YG Q+PKFA+D+F TTDGRWLI T+EV LTNL Sbjct: 181 FMLDVHVNEHGYTEVSIPFLVRDEIVYGAAQLPKFAEDLFRTTDGRWLISTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI+E LPLRF++L+P FRSEAG+AGRDTRGMLRQHQFWK E+VSIT EE S E E Sbjct: 241 NDEILEISDLPLRFSSLSPCFRSEAGAAGRDTRGMLRQHQFWKVEMVSITSEEQSLIELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE+ILKRL L +R V L TGD+GF+A KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 301 RMTECAEDILKRLGLPFRTVVLSTGDMGFAARKTYDIEVWLPGQECYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR K L F H+LNGSG AVGRCLIA+LENY ADGS+ IP VL+PYM + Sbjct: 361 GRRMNARYRTEGDKKLHFVHSLNGSGTAVGRCLIAVLENYQQADGSIIIPDVLQPYMGGM 420 Query: 421 AVIK 424 I Sbjct: 421 RCIT 424 >gi|163793135|ref|ZP_02187111.1| Seryl-tRNA synthetase [alpha proteobacterium BAL199] gi|159181781|gb|EDP66293.1| Seryl-tRNA synthetase [alpha proteobacterium BAL199] Length = 429 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 230/430 (53%), Positives = 300/430 (69%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ +R++ D AL KR L P +E IL+ D R + +++ + RRN S IG Sbjct: 1 MHDIRRLREDGAAFDAALAKRGLAPVAETILTRDADWRRVTTELQLAQQRRNEASKLIGT 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G DAL E + LKE++ LE++E + +++L++ IPN+P ++ P+G + Sbjct: 61 AKRNG--ESADALMAEVAELKERMAQLEEDERRLAGEVEELLAGIPNLPADDAPVGADED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R +GK +++H IGE LGLMDF+ A +L+GARF VL LA +ERAL Sbjct: 119 ANVELRRIGKPRERNFRAQDHVAIGEGLGLMDFEAAARLTGARFVVLKAELARMERALAA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE++ P+LVRD+A+YGTGQ+PKFA+D F TTDG WLIPT+EV LTNL Sbjct: 179 FMLDIHTGEFGYTEIAPPVLVRDQALYGTGQLPKFAEDQFRTTDGYWLIPTAEVPLTNLV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I+E LPLR+T P FRSEAGSAGRDTRGM+RQHQF K ELVSI + S EHE Sbjct: 239 ADQILEEAELPLRYTAYTPCFRSEAGSAGRDTRGMIRQHQFGKVELVSIAHPDRSDGEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ----NLYREISSCSTC 356 RM CAE +LKRLDL YRV++L TGD+GFSA +TYD+EVWL GQ YREISSCS C Sbjct: 299 RMTGCAETVLKRLDLPYRVMALSTGDMGFSARRTYDIEVWLPGQDDGAGRYREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R K+ +F HTLNGSG+A+GR LIAILENY ADGSVTIP L+PY Sbjct: 359 GDFQARRMKARFRRKGEKATEFVHTLNGSGLAIGRTLIAILENYQEADGSVTIPDALKPY 418 Query: 417 MNNLAVIKKE 426 + L I+ Sbjct: 419 LKGLERIEAR 428 >gi|53803953|ref|YP_114403.1| seryl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|67461697|sp|Q606P5|SYS_METCA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|53757714|gb|AAU92005.1| seryl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 427 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 194/427 (45%), Positives = 262/427 (61%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + R E L +R + +L+E+ + L + ++++ RNS S IGQ Sbjct: 1 MLDPRLFRTQLEETARQLGRRGFVLDTAAFGALEERRKALQVETQNLQNERNSRSRSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L L E+L E E + ++ L+ +PN+ +VP G S Sbjct: 61 AKARG--EDIEPLLAAVQGLGERLKENEAELASIQERMEALLLGVPNLLDTDVPEGRSEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ P ++H ++ LG DF+ A KLSG+RF VLTG LA L+RAL Q Sbjct: 119 DNVEIRRWGEPPQFDFEPKDHVDLAVGLGCADFEAAAKLSGSRFVVLTGPLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--RWLIPTSEVSLTN 238 FM+D+HT EHGY E P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDIHTGEHGYIETYVPFLVNADSLRGTGQLPKFEEDLFKVQHEPVFYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L EI+E + LPL++ P FRSEAGS GRD RG++RQHQF K ELV I R EDS Sbjct: 239 LVRDEIVEEERLPLKYVCHTPCFRSEAGSYGRDVRGLIRQHQFEKVELVQIVRPEDSREA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE + AE IL+RL L YR V LC GD GFS+ KTYDLEVWL GQ YREISSCS + Sbjct: 299 HEALTRHAEVILERLGLPYRRVLLCAGDTGFSSAKTYDLEVWLPGQQSYREISSCSNFRD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +R+R+P + + HTLNGSG+AVGR L+A+LEN + G + +P VL PYM Sbjct: 359 FQARRLQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENCQDEAGRIRVPEVLVPYMG 418 Query: 419 NLAVIKK 425 + +I Sbjct: 419 GVNLIGP 425 >gi|254438860|ref|ZP_05052354.1| seryl-tRNA synthetase [Octadecabacter antarcticus 307] gi|198254306|gb|EDY78620.1| seryl-tRNA synthetase [Octadecabacter antarcticus 307] Length = 430 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 204/428 (47%), Positives = 279/428 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R P S ++++DE R +I E +A N + ++G Sbjct: 1 MHDIRTIRENPAAFDAALSRRGDAPLSAELVAMDEARRAMILTAETAQADANKAAKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ + L+ S K Q+ L E ++L ++ IPN+P ++VP+GT N Sbjct: 61 AKGRGDDVEFERLRALVSKKKSQIAELNDEAKAQGAALTARLAMIPNLPADDVPMGTDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G + EHF+I MDF+ A K+SG+RF +++G +A L RAL Q Sbjct: 121 DNVEISRWGTPRAFDFTPTEHFDIAAVKPGMDFEAAAKISGSRFVLMSGAIARLHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E+ TE++ P+LVRD+AMYGT ++PKFA D + TT+G WLI TSE+ LT + Sbjct: 181 FMLDIHTVENNLTEMNTPVLVRDDAMYGTDKLPKFAGDSYQTTEGMWLISTSEIPLTYIA 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EII++ +LP R+T FRSEAGSAGRDT GMLRQHQF K E+VS+T + S E + Sbjct: 241 AGEIIDAATLPRRYTAHTLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSVTHPDASDAEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE +L+RL++ YR V LCTGD+GF A +T+D+E WL GQN YREISS ST G FQ Sbjct: 301 RMLRCAENLLERLEIPYRTVLLCTGDMGFGARRTFDIEAWLPGQNAYREISSVSTTGEFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + +F HTLNGSG+AVGRCLIA+LEN ADGSV IPT L +M Sbjct: 361 ARRMNARFKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVIIPTALHGHMGGK 420 Query: 421 AVIKKEHI 428 I + Sbjct: 421 TKINADGT 428 >gi|332357990|gb|EGJ35823.1| serine--tRNA ligase [Streptococcus sanguinis SK1056] Length = 425 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 201/428 (46%), Positives = 278/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + ++D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTDFDTVAEKLATRGVDTATLNQMKTIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDATLAELDTKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +ENI +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENIEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V +M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHNSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI Sbjct: 418 GLEVIAPR 425 >gi|154706003|ref|YP_001424633.1| seryl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] gi|189083565|sp|A9KFP4|SYS_COXBN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|154355289|gb|ABS76751.1| seryl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] Length = 423 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 261/424 (61%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +RQN EH+ L++R E S+ L L+ K + I+ + +RN S IG Sbjct: 1 MLDPKILRQNLEHVVEKLRRRGFEMDSDTFLQLENKRKEAQLAIQSFQTKRNQLSKTIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G + L E S L ++L E + + IPN+P + VP G S N Sbjct: 61 AKSKGENP--EPLMAEVSHLNDELKQEEANFETIQKAFSDFQLAIPNLPHDSVPDGKSEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G P ++H +GE +DF+ A KLSGARF VL G LA RAL Q Sbjct: 119 DNREIRQWGAPPGFDFTPKDHTVLGERDNQLDFEAAAKLSGARFVVLRGSLARAHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+DLHT +HGY EV P LV +E +YGTGQ+PKF ++ F +L+PT EV L N Sbjct: 179 FMLDLHTDQHGYEEVYVPYLVHEECLYGTGQLPKFREEQFQVAGDRNFFLVPTGEVPLVN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L EIIE+ +LP ++ P FRSEAGS G+D RGM+RQHQF K ELV + + E+S+ Sbjct: 239 LARDEIIEAPALPKKWVAQTPCFRSEAGSYGKDVRGMIRQHQFQKVELVQLVQPENSYQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE++L+ L L YRVV LC GDLGF+A KTYDLEVWL QN YREISSCS C + Sbjct: 299 LEEITRQAEKVLQLLALPYRVVELCAGDLGFAAAKTYDLEVWLPSQNKYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +R+R+P + + HTLNGSG+AVGR L+A++ENY ADG + +P L+ YM Sbjct: 359 FQARRIQARWRNPKTGKPELLHTLNGSGLAVGRTLVAVMENYQQADGHIRVPDALKSYMG 418 Query: 419 NLAV 422 + Sbjct: 419 GVDY 422 >gi|322412582|gb|EFY03490.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 425 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 194/428 (45%), Positives = 270/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + ++ +LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDAVAAKLKIRGVSEDTLTHLKNLDEKRRALLVQSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + ++ + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDASQQIADMQNVSADIKTIDSQLADIDQQVTDIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEKSYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVIALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|254524009|ref|ZP_05136064.1| seryl-tRNA synthetase [Stenotrophomonas sp. SKA14] gi|219721600|gb|EED40125.1| seryl-tRNA synthetase [Stenotrophomonas sp. SKA14] Length = 426 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 209/427 (48%), Positives = 275/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R P L L+ R E + SL+ + + + +++++ RNS S IG Sbjct: 1 MLDPALLRHQPADLAERLRTSRGFELDVSALESLEADRKRIQVRTQELQSLRNSRSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V A+ E + ++L E E+ + + IPN+P ++VP G Sbjct: 61 QAKAKG--EDVSAIMAEVAAFADELKASEVALDELREKIDAISMGIPNIPADDVPAGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ G +H E+G G +D + A KLSG+RF+VL G +A L RAL Sbjct: 119 NDNVEQARWGTPRQFDFKVLDHVELGARNGWLDGETAAKLSGSRFTVLRGPIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSL 236 QFM+DLHT EHGY E + PLLV +++ GT Q+PKF DD+F T R+LIPTSEV L Sbjct: 179 QFMVDLHTGEHGYEETNVPLLVNADSLRGTSQLPKFEDDLFKTAVGDSTRYLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EI++++ LPLR T + FR+EAGS GRD RGM+RQHQF K ELVSI+R EDS Sbjct: 239 TNIVRDEIVDAERLPLRMTAHSMCFRAEAGSGGRDVRGMIRQHQFEKVELVSISRPEDSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L++L L YR V LCTGD+GFSA KTYDLEVWL Q YREISSCS C Sbjct: 299 AEHQRMTRCAEVVLEKLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQETYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSGVAVGR +IA++ENY NADGS+T+P LRPY Sbjct: 359 GDFQARRMQARWRNPATGKPELAHTLNGSGVAVGRAMIAVMENYQNADGSITVPEALRPY 418 Query: 417 MNNLAVI 423 M L I Sbjct: 419 MGGLETI 425 >gi|163781886|ref|ZP_02176886.1| seryl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159883106|gb|EDP76610.1| seryl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 424 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 206/420 (49%), Positives = 280/420 (66%), Gaps = 7/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+DI+ IR+ P+++ LK R E + +L LD + R L+ +IE +RA RN+ S +I Sbjct: 1 MIDIELIRRKPDYVKERLKTRDPELPGLIDQVLELDSRRRSLLTEIEALRAERNARSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ EG + +++ LK ++ L++E EV L++L+ IPN+P E VP+G Sbjct: 61 GKLRLEGKDT--TQIESLVRELKAKIDKLDEELKEVQRELRELMLRIPNLPHESVPVGED 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +EN+ +R G+ + H+E+GE LG++DF+R +LSG+RF+VL G A LERAL Sbjct: 119 ESENVEVRRWGEPKEFTFQPKPHWELGEKLGILDFERGARLSGSRFTVLKGWGARLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLT 237 FM+DLH GY EV P LVR E + GTGQ+PKF +D++ C D +LIPT+EV LT Sbjct: 179 INFMLDLH-RTKGYEEVLPPHLVRPEVLEGTGQLPKFEEDLYKCERDELYLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+ EI++ + LP+ T P +R EAGS G+D RG++RQHQF K ELV I + S+ Sbjct: 238 NLFRGEILKEEELPIYLTAHTPCYRREAGSHGKDIRGIIRQHQFNKVELVKIVHPDTSYD 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E++ + AEE+LK L L YRVV LCTGDLGFSA KTYDLEVW Q YREISSCS C Sbjct: 298 ELEKLAADAEEVLKLLGLPYRVVELCTGDLGFSAAKTYDLEVWFPSQGKYREISSCSNCE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RRMN+R++D K+ +F HTLNGSG+AVGR L AILENY DGSV +P LR Y+ Sbjct: 358 DFQARRMNTRFKDERGKN-RFVHTLNGSGLAVGRTLAAILENYQREDGSVEVPEALRDYL 416 >gi|315644417|ref|ZP_07897550.1| seryl-tRNA synthetase [Paenibacillus vortex V453] gi|315280167|gb|EFU43460.1| seryl-tRNA synthetase [Paenibacillus vortex V453] Length = 427 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 190/428 (44%), Positives = 277/428 (64%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R ++ ALK R LD + R L+++ E ++ RRN+ SA++ Sbjct: 1 MLDVKILRSEYSRVEEALKNRGKSLDLIADFPKLDARRRELLQESESLKNRRNTVSAEVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D L E + +++ +++E E+ +S+ +L IPN+P E VP+G S Sbjct: 61 RLKK--NRENADELILEMREVSDRIKAMDEEVRELEASISELTLAIPNIPHESVPVGASE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ IR + + + H+E+ + LG++DF+ K++G+RF+ G A LERAL Sbjct: 119 EENVEIRRWAEPNAFDFEPKAHWELAQNLGILDFEAGAKVTGSRFTFYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+DLH+ +HGY E+ P +V +++YGTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 SFMMDLHSDKHGYEEMLPPYIVNRDSLYGTGQLPKFEEDLFKISDTDYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ + LP + + FRSEAG+AGRDTRG++RQHQF K E+V I E SF E Sbjct: 239 YHREEILNIEDLPKYYVAYSSCFRSEAGAAGRDTRGLIRQHQFNKVEMVKIVNPETSFDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE +L+ L+L YRV++LCTGD+GF + KTYDLEVWL +YREISSCS G+ Sbjct: 299 LEKMTTDAERVLQLLNLPYRVMALCTGDMGFGSMKTYDLEVWLPESGVYREISSCSNIGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R +F HTLNGSG+AVGR + AILENY ADGSV IP VLRPYM Sbjct: 359 FQARRANIRFRPEPKSKPEFVHTLNGSGLAVGRTVAAILENYQQADGSVIIPEVLRPYMG 418 Query: 419 NLAVIKKE 426 N+++I+++ Sbjct: 419 NVSIIEQK 426 >gi|325982390|ref|YP_004294792.1| seryl-tRNA synthetase [Nitrosomonas sp. AL212] gi|325531909|gb|ADZ26630.1| seryl-tRNA synthetase [Nitrosomonas sp. AL212] Length = 438 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 205/437 (46%), Positives = 285/437 (65%), Gaps = 15/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+IQ +R + +++ L KR E +L+ K +I+ + ++++A+RN+ S +IGQ Sbjct: 1 MLEIQQLRSDLDNVIRQLAKRGYVFPVETFNTLEAKRKIIQTQTQELQAQRNTTSKRIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G + A+ E + L + L + E + ++ +L+K++ +PN+P VP G Sbjct: 61 AKSKG--EDISAIMTEVTHLGDALKLAEDQLEQIQYNLQKILLEVPNLPHISVPDGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G+ ++H IGE LGL+DF+ A KLSGARFS++ G LA L RAL Q Sbjct: 119 GNVQIRHWGEPRQFDFAIKDHVSIGEGLGLLDFETAAKLSGARFSLMKGGLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------TDGRWL 228 FM+D HT EHGYTE P LV ++ GTGQ+PKFA D+F L Sbjct: 179 FMLDTHTLEHGYTETYVPYLVNRNSLRGTGQLPKFAQDLFAITAGDAESSSAGNISEYHL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV +TN+ EI+ +SLPL++ + P FRSEAGS GRDTRG++RQHQF K ELV Sbjct: 239 IPTAEVPITNMVRDEIVPLQSLPLKYVSHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVH 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I + S+ E+++ AE+IL++L L YRV++LCTGD+GFSA KTYD+EVWL QN YR Sbjct: 299 IVHPDQSYDALEQLVGHAEKILQKLMLPYRVMALCTGDMGFSAAKTYDIEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS C FQ+RRM +R+R+ N K + HTLNGSG+AVGR L+A+LENY NADGS+ Sbjct: 359 EISSCSNCEAFQARRMQARFRNENGKPM-LLHTLNGSGLAVGRTLVAVLENYQNADGSII 417 Query: 409 IPTVLRPYMNNLAVIKK 425 IP VLR YMN L + + Sbjct: 418 IPEVLRSYMNGLDQLGR 434 >gi|126697580|ref|YP_001086477.1| seryl-tRNA synthetase [Clostridium difficile 630] gi|255099171|ref|ZP_05328148.1| seryl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255304951|ref|ZP_05349125.1| seryl-tRNA synthetase [Clostridium difficile ATCC 43255] gi|115249017|emb|CAJ66828.1| Seryl-tRNA synthetase 1 [Clostridium difficile] Length = 423 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 274/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + + A+++R E + ++ LD K R +++++E ++ N NS +I Sbjct: 1 MLDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q I EG V K L +++ ++++ EV + ++ + IPNVP EVP G + Sbjct: 61 QLIKEGK--DVTEEKARLKELSDKIKGIDEKVKEVEAKMEYTLMRIPNVPHPEVPQGETD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR+ G+ + H++IG LG++DF+RA K++G+RF++ G A LER+L Sbjct: 119 EDNVQIRTWGEPTKFDFEHKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGARLERSLM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 F ++ HT++HGYTEV P + + GTGQ+PKF +DMF + IPT+EV +TN Sbjct: 179 NFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDMFKIEGLEYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++++EI++ LP+++ P FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 IHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDSYNE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE +L+ L L YRVV +CTGDLGF+A YDLEVW+ N Y EISSCS + Sbjct: 299 LESLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFKYDLEVWMPSYNRYVEISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R++ ++ HTLNGSG+A+GRCL AILENY ADGSV +P LRPYM Sbjct: 359 FQARRAGIRFKRDKKSKAEYVHTLNGSGLAIGRCLAAILENYQQADGSVVVPEELRPYM- 417 Query: 419 NLAVIK 424 + VIK Sbjct: 418 GVDVIK 423 >gi|168490677|ref|ZP_02714820.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|183575046|gb|EDT95574.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] Length = 424 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 202/427 (47%), Positives = 276/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R +E + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVEAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+GT Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGTDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|303248851|ref|ZP_07335100.1| seryl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302489720|gb|EFL49653.1| seryl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 429 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 185/428 (43%), Positives = 274/428 (64%), Gaps = 3/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++RQNPE + + +RH L+L+E R + +E +++RN+ SA++ + Sbjct: 1 MLDLKFVRQNPEAVAEGMARRHFPLDLPAFLALEEARRETLTAVEQKKSQRNAASAEVAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + TL ++ L+++ ++ +++ + +PN+P P G + Sbjct: 61 IKRQGG--DAAPVLEGLGTLSAEIKALDEKTRDLDEQVRQWLLGVPNIPNASTPDGAGED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R+VG +EH ++G AL +DF+RA KLSGARF VL LA LERAL Sbjct: 119 DNPTVRTVGTPRVFDFPIKEHQDVGTALDGLDFERAAKLSGARFVVLRKDLARLERALAA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+D H ++HGYTEV+ P +V E++ GTGQ+PKFA+D+F +LIPT+EV +TNL Sbjct: 179 FMLDTHIADHGYTEVATPYIVNAESLTGTGQLPKFAEDLFKLEGLESYLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E + +LP+ + FRSEAGS G+DT+G++R HQF K ELV + + S+ E Sbjct: 239 HRGETLPESALPVAYCCHTQCFRSEAGSYGKDTKGLIRLHQFGKVELVRLVHPDTSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AE IL++L+L YRVVSLCTGDLGF++ KTYDLEVWL GQ+ YREISSCS +F Sbjct: 299 EKLTGHAEAILQKLELPYRVVSLCTGDLGFTSAKTYDLEVWLPGQDKYREISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R++ +K HT+NGSG+A+GR + AILENYL DGSVT+P L PYM Sbjct: 359 QARRADIRFKPSGAKKTALVHTINGSGLAIGRTMAAILENYLQKDGSVTVPRALVPYMGG 418 Query: 420 LAVIKKEH 427 + ++ E Sbjct: 419 VESLEPEG 426 >gi|161611297|ref|YP_138864.2| seryl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|161936380|ref|YP_140747.2| seryl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] Length = 425 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 270/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + L L R + + + LD K R L+ K E+++A+RN S I Sbjct: 1 MLDVKRIRNDFDALSEKLATRGVVAETLNELKELDVKRRELLIKSEELKAQRNIASDDIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + ++ ++ E + L +I +PN P + VPIG Sbjct: 61 QAKR--NKEDASEQIAAMQKVSAEIKEIDAELAAIDEKLNTIIMTLPNTPNDSVPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPRDFDFEVKAHWDLGEDLGILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTE+ P +V ++M+GTGQ PKF +D F ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEMITPYMVNHDSMFGTGQYPKFKEDTFELDGTDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V ++ EDS+ E Sbjct: 238 YYRGEILDGKELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPEDSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVVNAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVISPK 425 >gi|94991059|ref|YP_599159.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS10270] gi|166223297|sp|Q1JFE4|SYS_STRPD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|94544567|gb|ABF34615.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS10270] Length = 425 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 267/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + ++ LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDTVAAKLKNRGVSEDTLTHLKELDEKRRTLLVQSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + + + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEGATQQIADMQKVSADIKTIDNQLVAIDQQVADIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+ +GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFDFEVKAHWNLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV+SLCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|332184963|ref|ZP_08386712.1| seryl-tRNA synthetase [Sphingomonas sp. S17] gi|332014687|gb|EGI56743.1| seryl-tRNA synthetase [Sphingomonas sp. S17] Length = 425 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 231/426 (54%), Positives = 297/426 (69%), Gaps = 1/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR +P D AL KR EPQ+E ++++DE+ R +I + + + RRN S QIGQ Sbjct: 1 MHDIRLIRDDPAAFDAALAKRGAEPQAETLIAIDERRRAIIAEAQAAQTRRNELSKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A + + AL E + LK +LP LE++E V + L ++ +PN+P +VP G + Sbjct: 61 AKAARDEARAQALMEEVAGLKARLPELEEQERSVEAELNTALAALPNLPAADVPEGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N L+ G+ S +REH I ALG MDFD LSGARF++L G +A L RALGQ Sbjct: 121 DNALVHQKGEPTSFAFEAREHDVIAPALG-MDFDTGVALSGARFTLLRGAMARLSRALGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D T +HG+ V PLLVRDEA +GTGQ+PKFA+D+F TTDGRWLIPT+EVSLTN+ Sbjct: 180 FMLDRMTEQHGFELVQPPLLVRDEAAFGTGQLPKFAEDLFRTTDGRWLIPTAEVSLTNIV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I+ + LPLRFT L P FRSEAG+AGRDTRG++RQHQF K E+VSIT E S EHE Sbjct: 240 REAILSEQELPLRFTALTPCFRSEAGAAGRDTRGLIRQHQFDKVEMVSITTPEQSDAEHE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM + AE +L+ L L YR + LCTGD+GFSA +T+DLEVWL GQ YREISSCSTC +FQ Sbjct: 300 RMTAAAEGVLEALGLPYRRMLLCTGDMGFSAARTFDLEVWLPGQARYREISSCSTCTDFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RYR K +F HTLNGSG+AVGR L+A++ENY ADGSV +P LRPY+ Sbjct: 360 ARRMMARYRPTEGKGTRFVHTLNGSGLAVGRTLVAVIENYQQADGSVVVPEALRPYLGGQ 419 Query: 421 AVIKKE 426 AV++ Sbjct: 420 AVLEPR 425 >gi|254303605|ref|ZP_04970963.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323797|gb|EDK89047.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 421 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 199/425 (46%), Positives = 272/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + + LD K R ++ ++E+++ RN+ SA+I Sbjct: 1 MLELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNASAEIAN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + + + + ++ L+ E E+ +K + IPNV PIG Sbjct: 61 LKKEKK--DANHIIEKMGEVSAKIKDLDAELVEIDEKIKDIQLNIPNVYHSSTPIGPDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G + H++IGE LG++DF+R KLSG+RF + G A LERAL Sbjct: 119 HNLEIRKWGVPKKFDFEPKSHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 179 FMLDVHTLEEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E Sbjct: 239 RKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 299 KMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR PN +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM L Sbjct: 359 ARRMGLKYRVPNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGL 416 Query: 421 AVIKK 425 VIKK Sbjct: 417 DVIKK 421 >gi|253998905|ref|YP_003050968.1| seryl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|253985584|gb|ACT50441.1| seryl-tRNA synthetase [Methylovorus sp. SIP3-4] Length = 429 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 196/431 (45%), Positives = 269/431 (62%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + L R + +L+ +++ + +D++A+RN+ S QIG Sbjct: 1 MLDIQQLRNELDTVVSRLASRGFALDTARFEALESDRKLVQTRTQDLQAKRNATSKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G + ++ E + L EQL E+ + + L++ + IPN+P VP G S Sbjct: 61 AKSKG--EDISSIMAEVAGLGEQLKADEERLSVIQAELQQFLLNIPNLPHASVPQGKSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG + ++H ++G LG +DFD KL+GARF+++ G +A L RAL Q Sbjct: 119 DNVEVRKVGTPRNFDFDIKDHTDVGTPLG-LDFDTGAKLAGARFTLMRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--------MFCTTDGRWLIPTS 232 FM+D T HGYTE P +V +++ GTGQ+PKF D + +LIPTS Sbjct: 178 FMLDTQTERHGYTECYTPYIVNADSLRGTGQLPKFEADLFAAQKGGQEGEGEALYLIPTS 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV+LTN EI+ ++SLP++ T P FRSEAGS GRDTRGM+RQHQF K E+V I Sbjct: 238 EVTLTNTVRDEILAAESLPIKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S+ E M+ AE IL+ L L YRVVSLCTGD+GF A KTYDLEVWL QN YREISS Sbjct: 298 EKSYEALEEMVGHAEYILQALGLPYRVVSLCTGDMGFGAAKTYDLEVWLPAQNTYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C FQ+RR+ +R+R+ K + HTLNGSG+AVGR L+A+LENY ADGSV +P V Sbjct: 358 VSNCEAFQARRLQARFRNEGGK-PELVHTLNGSGLAVGRTLVAVLENYQQADGSVVVPEV 416 Query: 413 LRPYMNNLAVI 423 LRPYM L + Sbjct: 417 LRPYMGGLERL 427 >gi|295112155|emb|CBL28905.1| seryl-tRNA synthetase [Synergistetes bacterium SGP1] Length = 425 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 200/427 (46%), Positives = 275/427 (64%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++W+ + E ++ LK R + + + +LDEK R +I + ED++ARRN S ++G Sbjct: 1 MLDLRWMLAHREEVESFLKNRRHDFDMDALEALDEKRRHIIMETEDLKARRNEGSRKVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G VDAL E + +++ L++ S L + +PN E P+G + Sbjct: 61 AKKTG--ENVDALMQEIRLMGDRIKELDEGLSRTESELNDCLMRLPNRLSETTPVGEDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N ++R+ G + H++I EALG+MDF+R L+ +RF+VL G A +ERAL Sbjct: 119 DNPVVRTWGTPREFSFEPKPHWDIAEALGIMDFERGVLLAQSRFTVLKGMGARMERALIA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 FM+DLHT + GY EV P +VR + GTGQ+PKFA+D++ + WLIPT+EV LTNL Sbjct: 179 FMLDLHTQKQGYLEVEPPFMVRSAILEGTGQLPKFAEDLYRIADEDLWLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+E LPL +T P FR EAGSAGRD RGMLRQHQF K E+V + E S+ E Sbjct: 239 HRESILEESDLPLYYTAYTPCFRREAGSAGRDVRGMLRQHQFDKVEMVKLCTPETSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AE +L+ L+L YRVVSLC+GD+GF + KTYDLEVWL Q YREISSCS C +F Sbjct: 299 EKLTADAESVLQALELPYRVVSLCSGDIGFGSTKTYDLEVWLPSQKRYREISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RRMN RYR + +F HTLNGSG+AVGR LIAI+EN+ DG+V +P L PYMN Sbjct: 359 QARRMNCRYRPASGGKPRFVHTLNGSGIAVGRTLIAIIENFQREDGTVVVPRALVPYMNG 418 Query: 420 LAVIKKE 426 + I K+ Sbjct: 419 TSAIGKD 425 >gi|49474113|ref|YP_032155.1| seryl-tRNA synthetase [Bartonella quintana str. Toulouse] gi|67461757|sp|Q6G036|SYS_BARQU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|49239617|emb|CAF25976.1| Seryl-tRNA synthetase [Bartonella quintana str. Toulouse] Length = 425 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 245/424 (57%), Positives = 314/424 (74%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+ PE LD AL KR +EPQ+E ++ LD + R + K++ + RRN+ S +IGQ Sbjct: 1 MLDIKWIREYPEKLDEALAKRGIEPQAERLIKLDLERRSHVAKVQSAQERRNAASKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A + ++ + L+ E +K L EE + + ++ +S +PN+PL++V +G + Sbjct: 61 ALAACDQTMAEHLRAEVEEIKVFLSSATTEEKRLTENFERALSTLPNIPLDDVSVGKDGS 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++IR G +EHF++G+ L MDF+RA++LSG RF+VL+G LA LERALGQ Sbjct: 121 DNVVIRHFGTPAMFDFTPKEHFDLGQNLKQMDFERASRLSGTRFTVLSGALARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+H EHGYTEVS PLLVRDE +YG Q+PKFADD+F TTDGRWLI T+EV LTNL Sbjct: 181 FMLDVHVDEHGYTEVSVPLLVRDEIVYGAAQLPKFADDLFRTTDGRWLISTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++EI+E LPLRF++L P FRSEAGSAGRDTRGMLRQHQFWK E+VSIT EE S E E Sbjct: 241 NNEILEISDLPLRFSSLTPCFRSEAGSAGRDTRGMLRQHQFWKVEMVSITTEEQSLMELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE++LKRL L +R V L TGD+GF+A KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 301 RMTECAEDVLKRLGLPFRTVVLSTGDMGFAARKTYDIEVWLPGQGCYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR K+LKF H+LNGSG AVGRCLIAILENY ADGS+ IP VL+PY+ + Sbjct: 361 GRRMNARYRKEGDKTLKFVHSLNGSGTAVGRCLIAILENYQQADGSIIIPDVLQPYVKGM 420 Query: 421 AVIK 424 I Sbjct: 421 RCIT 424 >gi|237742877|ref|ZP_04573358.1| seryl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|229430525|gb|EEO40737.1| seryl-tRNA synthetase [Fusobacterium sp. 4_1_13] Length = 424 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 199/425 (46%), Positives = 272/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + + LD K R ++ ++E+++ RN+ SA+I Sbjct: 4 MLELKFMRENVEMLKEMLKNRNSNVDMDTFVELDSKRREILSEVENLKRERNNVSAEIAN 63 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + L + + ++ L+ E E+ +K + IPNV PIG + Sbjct: 64 LKKEKK--DANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHSSTPIGPDED 121 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G + H++IGE LG++DF+R KLSG+RF + G A LERAL Sbjct: 122 YNLEIRKWGVPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAARLERALIN 181 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E YTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 182 FMLDVHTLEEDYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 241 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E Sbjct: 242 RKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDELE 301 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 302 KMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 361 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR PN +F HTLNGSG+AVGR L+AI+ENY DGS IP VL PYM + Sbjct: 362 ARRMGLKYRVPNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLIPKVLIPYMGGV 419 Query: 421 AVIKK 425 VIKK Sbjct: 420 DVIKK 424 >gi|298693331|gb|ADI96553.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133] Length = 428 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVCFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|169335609|ref|ZP_02862802.1| hypothetical protein ANASTE_02029 [Anaerofustis stercorihominis DSM 17244] gi|169258347|gb|EDS72313.1| hypothetical protein ANASTE_02029 [Anaerofustis stercorihominis DSM 17244] Length = 421 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 195/425 (45%), Positives = 266/425 (62%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR N E ++ LK+R + + I+ LD + R +KK E+ +A +N S QI Sbjct: 1 MLDIKRIRTNTEEVNELLKRRG-DYSVDKIVELDAERREYLKKAEEGKAEQNKVSKQIPI 59 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V L E L ++ + E+ + LI IPN P ++V +G N Sbjct: 60 MKKEGK--DVSELLKEMKELSSEVKEYNSKVGELEEKISDLILSIPNTPNKDVTVGKDEN 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + VG ++ H+++G LGL+DF+RA K+SGARFS+ TG A LERAL Sbjct: 118 DNKELIKVGTPREFDFEAKAHWDLGVDLGLLDFERAVKISGARFSMFTGMGAKLERALIS 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+D HT E+ Y E+S P +V +M GTGQ+PKF +D F + + IPT+EV +TN+ Sbjct: 178 FMLDTHTIENDYVEISPPFMVNRTSMTGTGQLPKFEEDAFNIKNNDYFLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ + LP FT P FR+EAGSAGRDTRG++R HQF K ELV + + ++S+ E Sbjct: 238 HRGEILNEEDLPKYFTAYTPCFRAEAGSAGRDTRGLIRNHQFDKVELVKLAKPDNSYEEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + A +IL L++ YRV+ LCTGDLGFSA KTYD+EVWL N Y EISSCS ++ Sbjct: 298 EDLTLEARKILDLLEIPYRVIELCTGDLGFSAAKTYDIEVWLPSYNRYVEISSCSNFEDY 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYRD + + F HTLNGS +AVGR A++ENY NADGSVT+P LR Y+ Sbjct: 358 QARRANIRYRDKDGN-VNFVHTLNGSALAVGRTFAAVIENYQNADGSVTVPKALRSYLGG 416 Query: 420 LAVIK 424 + VIK Sbjct: 417 MEVIK 421 >gi|322517430|ref|ZP_08070303.1| serine--tRNA ligase [Streptococcus vestibularis ATCC 49124] gi|322123912|gb|EFX95471.1| serine--tRNA ligase [Streptococcus vestibularis ATCC 49124] Length = 446 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 197/428 (46%), Positives = 270/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + L L R + + + LD K R L+ K E+++A+RN S I Sbjct: 22 MLDVKRIRNDFDALSEKLATRGVVAETLNELKELDVKRRELLIKSEELKAQRNIASDGIA 81 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + ++ ++ E + L ++ +PN P E VP+GT Sbjct: 82 QAKR--NKEDASEQIAAMQKVSAEIKEIDSELAAIDEKLNNIVVTLPNTPHETVPVGTDE 139 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 140 DENVEVRRWGTPRDFDFEIKPHWDLGEDLGILDWERGAKVTGSRFLFYKGLGAKLERAIY 199 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTE+ P +V ++M+GTGQ PKF +D F ++ IPT+EV LTN Sbjct: 200 NFMLDEHAKE-GYTEMITPYMVNHDSMFGTGQYPKFKEDTFELDGTDYVLIPTAEVPLTN 258 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V ++ E S+ E Sbjct: 259 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPESSYDE 318 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 319 LEKMVVNAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 378 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 379 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 438 Query: 419 NLAVIKKE 426 VI + Sbjct: 439 GAEVISPK 446 >gi|70725009|ref|YP_251923.1| seryl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|123661703|sp|Q4LAK8|SYS_STAHJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|68445733|dbj|BAE03317.1| seryl-tRNA synthetase (Serine-tRNA ligase) [Staphylococcus haemolyticus JCSC1435] Length = 428 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 192/427 (44%), Positives = 266/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R+ + + ++ R +P+ + +L LD + R LI K E+++ARRN S +I Sbjct: 1 MLDIKLFREQADTVKSKIELRGDDPKVVDEVLELDNERRQLIGKTEEMKARRNKVSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D + E L +++ + + +EV + ++ ++ IPN+ E+VP G S Sbjct: 61 EKKR--NKENADDVIKEMRELGDEIKENDAKLNEVDNKVRDILIRIPNLIAEDVPQGDSD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DF+RA K+SGARF LT A LERAL Sbjct: 119 EENVEVKKWGTPREFDFEPKAHWDLVEELKMADFERAAKISGARFVYLTKDGALLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +M+ HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP +FT FRSEAGSAGRDTRG++R HQF K E+V I + EDS+ Sbjct: 239 FYRDEIIQPGVLPEKFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIEKPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL + Y+EISSCS C + Sbjct: 299 LEDMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYDNYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY NADGS+TIP L P+M Sbjct: 359 FQARRANIRFKRDAASKPELAHTLNGSGLAVGRTFAAIVENYQNADGSITIPEALVPFMG 418 Query: 419 NLAVIKK 425 I+ Sbjct: 419 GKTEIRP 425 >gi|332364654|gb|EGJ42423.1| serine--tRNA ligase [Streptococcus sanguinis SK1059] Length = 425 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 200/428 (46%), Positives = 278/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + L R ++ + +D++ R L+ K+E+++A RN+ SA+I Sbjct: 1 MLDLKRIRTYFDSVAEKLATRGVDAATLNQMKIIDKERRDLLVKVEELKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E+ + L + + +PN+P E VP+G Sbjct: 61 QAKR--NKENADDKIAAMQKLSAEVKNLDATLAELDAKLTEFTTTLPNIPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE L ++D++R K++GARF G A LERA+ Sbjct: 119 DENVEVRRWGTPRQFDFEAKAHWDLGEDLDILDWERGAKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 L VI + Sbjct: 418 GLEVIAPK 425 >gi|329850424|ref|ZP_08265269.1| seryl-tRNA synthetase [Asticcacaulis biprosthecum C19] gi|328840739|gb|EGF90310.1| seryl-tRNA synthetase [Asticcacaulis biprosthecum C19] Length = 427 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 215/426 (50%), Positives = 287/426 (67%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M DI+ +R NP+ R E ++ ++SLD + R ++ +ARRN S Q Sbjct: 1 MHDIKALRDNPQVYVHGWNSRGRESSQADADSLISLDSELRAAQTAFQNAQARRNEASKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQA A+ + + AL E +LK L + ++ ++ L+ ++ +PN+P E+VP G Sbjct: 61 IGQAKAQKDEAKAQALMAEVESLKTTLETEDAKQRDLGEKLRTELASLPNLPFEDVPQGE 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+ R G + I ++H ++GEA+ +MDF+ A K+SG+RF L G LA LERA Sbjct: 121 DEAGNVEQRRWGDPRNFIFTPKDHADLGEAMKMMDFEAAAKISGSRFVFLKGQLARLERA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 +GQFM+D+ T+EHGYTEV+ P+LV+D AM+GTGQ+PKF +D+F T + +LIPT+EVSLT Sbjct: 181 IGQFMLDVQTNEHGYTEVNPPVLVKDHAMFGTGQLPKFEEDLFKTAEPFYLIPTAEVSLT 240 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL I + LPLR T L FR+EAGSAGRDT+GM+RQHQF K ELVSIT E S Sbjct: 241 NLIREAITAEEELPLRLTALTNCFRAEAGSAGRDTKGMIRQHQFQKVELVSITTPEQSSE 300 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EHERM CAE ILKRL+L YR + LCTGD+GF A KTYDLEVWL QN YREISSCS CG Sbjct: 301 EHERMTGCAESILKRLELPYRTMLLCTGDMGFGARKTYDLEVWLPSQNTYREISSCSNCG 360 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RRM++R R K +F HTLNGSG+AVGR L+A++ENY + +G + +P VL+PYM Sbjct: 361 DFQARRMDARTRKAGEKGTRFVHTLNGSGLAVGRTLVAVMENYQDENGKIAVPVVLQPYM 420 Query: 418 NNLAVI 423 L I Sbjct: 421 GGLTQI 426 >gi|182679617|ref|YP_001833763.1| seryl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|238691238|sp|B2IJG1|SYS_BEII9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|182635500|gb|ACB96274.1| seryl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 436 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 240/435 (55%), Positives = 302/435 (69%), Gaps = 10/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+WIR N D ++R L S +L+LD+ R I + + + RRN+ S +IG Sbjct: 1 MYDIKWIRDNSALFDQGRERRGLPKLSAELLALDDARRAAIAESQAAQERRNAASKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ + + +ALK E + LK P LE+ E ++L + ++ IPN+PLE+VP G N Sbjct: 61 AMKAKDNARAEALKAEMAELKAVSPALEEAERLAIAALDRALAEIPNLPLEDVPFGRDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R VG+KP + +EHF+IGE LGLMDF+ A KLSGARF V G LA LERALGQ Sbjct: 121 DNPELRVVGEKPVFSFVPKEHFDIGEGLGLMDFEAAAKLSGARFVVNKGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----------DGRWLIP 230 FM+DLHT EHGYTEV+ P+L RD+A++GT Q+PK +DMF D WLIP Sbjct: 181 FMLDLHTGEHGYTEVNPPILARDDALFGTAQLPKLEEDMFAAHAGRVPQEAAGDLYWLIP 240 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 TSEV LTNL I++ K LPLRFT P FR+EAGSAGRDTRGM+RQHQF K ELVSIT Sbjct: 241 TSEVVLTNLVRETILDEKQLPLRFTACTPCFRAEAGSAGRDTRGMIRQHQFTKTELVSIT 300 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E++ EHERML+CAEE+LKRL L YRVV+LCTGD+GF++ KTYD+EVWL GQ YREI Sbjct: 301 TPEEALVEHERMLTCAEEVLKRLGLAYRVVTLCTGDMGFASQKTYDIEVWLPGQGRYREI 360 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS CG+FQ+RRMN+RYR K+ +F HTLNGSGVAVGR L+A+LENY DG V +P Sbjct: 361 SSCSVCGDFQARRMNARYRPEGGKTTRFVHTLNGSGVAVGRALVAVLENYQREDGGVNVP 420 Query: 411 TVLRPYMNNLAVIKK 425 L PYM + I + Sbjct: 421 RALLPYMGGITTITR 435 >gi|239637294|ref|ZP_04678281.1| seryl-tRNA synthetase [Staphylococcus warneri L37603] gi|239597131|gb|EEQ79641.1| seryl-tRNA synthetase [Staphylococcus warneri L37603] Length = 428 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + +L LDEK R LI K E+++A+RN S +I Sbjct: 1 MLDIKLFRTEPDKVKSKIELRGDDPKVVDEVLELDEKRRTLISKTEEMKAKRNKVSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 61 QKKR--NKENADDVIAEMRQLGDDIKEYDTQLNEIDNKMTDILCRIPNLINDDVPQGASD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ENI ++ G ++ H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EENIEVKKWGTPREFDFEAKAHWDIVEDLKMADFDRAAKISGARFVYLTRDGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRDEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ N+ + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDNAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I+K Sbjct: 419 GKTHIQK 425 >gi|326561007|gb|EGE11372.1| seryl-tRNA synthetase [Moraxella catarrhalis 7169] Length = 422 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 196/425 (46%), Positives = 279/425 (65%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R N E L L R + + ++ + + + K E ++A++N+ + ++G+ Sbjct: 1 MLDPKFLRGNLEELKAKLAVRGYDLDVAFWQEVENQRKSIQVKTEALQAKKNAGAKKVGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L N+ + E + E E E+ +++ IPN+P + VP+G+ Sbjct: 61 LKRHG--EDTSELMNQMQLVSEAMKAAENELKELQNTITTAALQIPNLPDDSVPVGSDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H +IGE+LG +DF+ A KL+GARFSVL GHLA L RAL Q Sbjct: 119 DNVEVRRWGVPREFDFAIKDHTDIGESLGQLDFELAAKLTGARFSVLKGHLAKLNRALVQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE+ P +V +++ GTGQ+PKF +D+F +LIPTSEV LTN Sbjct: 179 FMLDTHTQKYGYTEMYVPYMVNSDSLQGTGQLPKFEEDLFKLRGEKEYYLIPTSEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I+ + LP++ T P FRSEAGSAGRDTRG++RQHQF K E+V +TR + S Sbjct: 239 SVRDTILSPRDLPIKLTAHTPCFRSEAGSAGRDTRGLIRQHQFEKVEMVQVTRADSSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE +L+ L+L YRV++LCTGD+GFSA KTYD+EVWL QN+YREISSCS CG+ Sbjct: 299 LEQMTAQAEYVLQALELPYRVMTLCTGDMGFSAVKTYDIEVWLPSQNMYREISSCSNCGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM++R +D K + HTLNGSG+AVGR L+AILEN+ NADG++TIP L+PYM Sbjct: 359 FQARRMSARLKD--GKHSELVHTLNGSGLAVGRTLLAILENHQNADGTITIPKALQPYMG 416 Query: 419 NLAVI 423 L VI Sbjct: 417 GLEVI 421 >gi|323127929|gb|ADX25226.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 425 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 194/428 (45%), Positives = 270/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + ++ +LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDAVAAKLKIRGVSEDTLTHLKNLDEKRRTLLVQSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + ++ + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDASQQIADMQNVSADIKTIDSQLADIDQQVTDIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEKSYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVIALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|282902640|ref|ZP_06310533.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282918077|ref|ZP_06325827.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|282921299|ref|ZP_06329017.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|283767799|ref|ZP_06340714.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|282315714|gb|EFB46098.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282318362|gb|EFB48722.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|282597099|gb|EFC02058.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|283461678|gb|EFC08762.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] Length = 428 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRCVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|297538756|ref|YP_003674525.1| seryl-tRNA synthetase [Methylotenera sp. 301] gi|297258103|gb|ADI29948.1| seryl-tRNA synthetase [Methylotenera sp. 301] Length = 426 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 204/427 (47%), Positives = 275/427 (64%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + + LK R E S +L+ + + + + ++++A+RN+ S QIG Sbjct: 1 MLDIQALRTDLDGVVSQLKARGFEFDSASFTTLENERKTVQTRTQELQAKRNNTSKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G V A+ E + +QL E E+ +SL+ L+ +PN+P VP G S Sbjct: 61 AKSKG--EDVSAIMAEVAGFGDQLKADEARLIELQASLQNLLLNVPNLPHSSVPSGKSEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI +R VG + ++H ++G LG +DFD TKLSG RF+++ G +A + RAL Q Sbjct: 119 DNIEVRKVGTPRTFDFEVKDHADVGTPLG-LDFDTGTKLSGTRFTLMRGQIAKMHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM---FCTTDGRWLIPTSEVSLT 237 FM++ T +HGY E P LV E + GTGQ+PKF +D+ +LIPTSEV+LT Sbjct: 178 FMLNTQTEQHGYEECYTPYLVNAETLTGTGQLPKFEEDLFSLQHNDSKLYLIPTSEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N EI+ +SLP++ T P FRSEAGS GRDT+GM+RQHQF K E+V I + S+ Sbjct: 238 NTVRDEIVPLESLPIKLTAHTPCFRSEAGSYGRDTKGMIRQHQFDKVEMVQIVHPDTSYA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ AE ILK L L YRVVSLCTGD+GF A KTYDLEVWL QN YREISS S C Sbjct: 298 ALEEMVGHAENILKALGLPYRVVSLCTGDMGFGAAKTYDLEVWLPAQNTYREISSVSNCE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR+ +R+R+ N K + HTLNGSG+AVGR L+A+LENY NADGSVT+P VLRPYM Sbjct: 358 AFQARRLQARFRNENGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVLRPYM 416 Query: 418 NNLAVIK 424 N L + Sbjct: 417 NGLEKLT 423 >gi|194366308|ref|YP_002028918.1| seryl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] gi|238693459|sp|B4SP40|SYS_STRM5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|194349112|gb|ACF52235.1| seryl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] Length = 426 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 209/427 (48%), Positives = 275/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R P L L+ R E + SL+ + + + +++++ RNS S IG Sbjct: 1 MLDPALLRHQPADLAERLRTSRGFELDVSALESLEADRKRIQVRTQELQSLRNSRSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V A+ E + ++L E E+ + + IPN+P ++VP G Sbjct: 61 QAKAKG--EDVSAIMAEVAAFADELKASEVALDELREKIDAISMGIPNLPADDVPAGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ G +H E+G G +D + A KLSG+RF+VL G +A L RAL Sbjct: 119 NDNVEQARWGTARQFDFKVLDHVELGARNGWLDGETAAKLSGSRFTVLRGPIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSL 236 QFM+DLHT EHGY E + PLLV +++ GT Q+PKF DD+F T R+LIPTSEV L Sbjct: 179 QFMVDLHTGEHGYEETNVPLLVNADSLRGTSQLPKFEDDLFKTAVGDSTRYLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EI++++ LPLR T + FR+EAGS GRD RGM+RQHQF K ELVSI+R EDS Sbjct: 239 TNIVRDEIVDAERLPLRMTAHSMCFRAEAGSGGRDVRGMIRQHQFEKVELVSISRPEDSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L++L L YR V LCTGD+GFSA KTYDLEVWL Q YREISSCS C Sbjct: 299 AEHQRMTRCAEVVLEKLGLPYRKVLLCTGDMGFSAVKTYDLEVWLPSQETYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSGVAVGR +IA++ENY NADGS+T+P LRPY Sbjct: 359 GDFQARRMQARWRNPATGKPELAHTLNGSGVAVGRAMIAVMENYQNADGSITVPEALRPY 418 Query: 417 MNNLAVI 423 M L I Sbjct: 419 MGGLETI 425 >gi|225023841|ref|ZP_03713033.1| hypothetical protein EIKCOROL_00707 [Eikenella corrodens ATCC 23834] gi|224943315|gb|EEG24524.1| hypothetical protein EIKCOROL_00707 [Eikenella corrodens ATCC 23834] Length = 430 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 194/432 (44%), Positives = 275/432 (63%), Gaps = 9/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + L +R S +L+ + + L + E++++RRNS S QIG Sbjct: 1 MLDIQLLRTDAAAVAAKLAQRGFVFDSAAFDALEAQRKALQMRTEELQSRRNSVSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + +A E + +K L + + V + + L+ IPN+P E VP G Sbjct: 61 LKGQGKHAEAEAAMVEVAQIKTDLEQADTDYQAVQAQIDALLLGIPNLPHESVPAGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ A LSGARFS++ G +A L RAL Q Sbjct: 121 ENVEVRRVGTPRQFDFEIKDHVDLGEKLG-LDFETAAALSGARFSLMKGQVARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKF +D+F ++LIPT+E Sbjct: 180 FMLDTHTQQHGYTECYTPYIVSDSTLIGTGQLPKFGEDLFHVIRGGDESKTKQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN I+ + +LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I + Sbjct: 240 VTLTNTVRERILPADALPLKLTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVEMVQIAHPD 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE IL+ L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 HSYDALEEMVGHAERILQLLELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D + K+ + HTLNGSG+AVGR L+A+LEN+ NADGS++IP L Sbjct: 360 SNCEDFQARRMKARFKDEDGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSISIPAAL 418 Query: 414 RPYMNNLAVIKK 425 RPY+ + + Sbjct: 419 RPYLGGVDKLVP 430 >gi|330829974|ref|YP_004392926.1| serine tRNA synthetase [Aeromonas veronii B565] gi|328805110|gb|AEB50309.1| Serine tRNA synthetase; also charges selenocystein tRNA with serine [Aeromonas veronii B565] Length = 431 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 191/434 (44%), Positives = 262/434 (60%), Gaps = 15/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R + E L R + +L+EK + L + ++++A RN+ S IG+ Sbjct: 1 MLDPKYLRSDIEEAAARLATRGYVLDVAAVNALEEKRKDLQSRTQELQAERNARSKSIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G V LK E + + ++L + E + + LK + IPN+P E P+G N Sbjct: 61 AARRG--EDVAPLKAEVTKINDELETSKVELDALLAQLKAIADAIPNLPSETTPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G R+H ++GEA +DF KLSG RF V+ G +A L RAL Q Sbjct: 119 DNVEVRRWGTPREFSFPVRDHIDLGEAAKGVDFKNGVKLSGTRFVVMKGQIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----------DGRWLI 229 FM+DLHT +HGYTE P LV +++YGTGQ+PKFA D+F T LI Sbjct: 179 FMLDLHTQQHGYTECYVPYLVNPDSLYGTGQLPKFAQDLFNTGIEGEGEEEGKLRKFSLI 238 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PTSEV LTN+ EI +++ LP++ T +P FRSEAGS GRDTRG++R HQF K E+V + Sbjct: 239 PTSEVPLTNMARDEIFDAQELPIKMTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQL 298 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E S+ E M+ AE++L+ L+L YRV++L TGD+GF A KTYDLEVWL QN YRE Sbjct: 299 VHPEKSWDALEEMVGHAEKVLQLLELPYRVMALSTGDMGFCASKTYDLEVWLPAQNTYRE 358 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISS S C +FQ+RRM +R R + HTLNGSG+AVGR L+A++ENY DG + I Sbjct: 359 ISSVSNCTDFQARRMQARVRI--DGKPQLLHTLNGSGLAVGRTLVAVMENYQQEDGRIAI 416 Query: 410 PTVLRPYMNNLAVI 423 P L+ YM L I Sbjct: 417 PAALQSYMGGLTHI 430 >gi|237743593|ref|ZP_04574074.1| seryl-tRNA synthetase [Fusobacterium sp. 7_1] gi|229432624|gb|EEO42836.1| seryl-tRNA synthetase [Fusobacterium sp. 7_1] Length = 424 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 199/425 (46%), Positives = 271/425 (63%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + + LD K R ++ ++E+++ RN+ S +I Sbjct: 4 MLELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNVSVEIAN 63 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E L + + ++ L+ E E+ +K + IPNV PIG N Sbjct: 64 LKKEKK--DASHLIEKMGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDEN 121 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G+ + H++IGE LG++DF+R KLSG+RF + G A LERAL Sbjct: 122 YNLEIRKWGEPKKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALIN 181 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 182 FMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 241 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E Sbjct: 242 RKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAESSYDELE 301 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M+ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 302 KMVKNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 361 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR PN +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM + Sbjct: 362 ARRMGLKYRVPNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGV 419 Query: 421 AVIKK 425 VIKK Sbjct: 420 DVIKK 424 >gi|313201004|ref|YP_004039662.1| seryl-tRNA synthetase [Methylovorus sp. MP688] gi|312440320|gb|ADQ84426.1| seryl-tRNA synthetase [Methylovorus sp. MP688] Length = 429 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 269/431 (62%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + L R + +L+ +++ + +D++A+RN+ S QIG Sbjct: 1 MLDIQQLRNELDTVVSRLASRGFALDTARFEALESDRKLVQTRTQDLQAKRNATSKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G V ++ E + L EQL E+ + + L++ + IPN+P VP G S Sbjct: 61 AKSKG--EDVSSIMAEVAGLGEQLKADEERLGVIQAELQQFLLNIPNLPHASVPQGKSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG + ++H ++G LG +DFD KL+GARF+++ G +A L RAL Q Sbjct: 119 DNVEVRKVGTPRNFDFEIKDHTDVGMPLG-LDFDTGAKLAGARFTLMRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--------MFCTTDGRWLIPTS 232 FM+D T HGYTE P +V +++ GTGQ+PKF D + +LIPTS Sbjct: 178 FMLDTQTERHGYTECYTPYIVNADSLRGTGQLPKFEADLFAAQKGGQEGEGEALYLIPTS 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV+LTN EI+ ++SLP++ T P FRSEAGS GRDTRGM+RQHQF K E+V I Sbjct: 238 EVTLTNTVRDEILAAESLPVKLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S+ E M+ AE IL+ L L YRVVSLCTGD+GF A KTYDLEVWL QN YREISS Sbjct: 298 EKSYEALEEMVGHAEYILQALGLPYRVVSLCTGDMGFGAAKTYDLEVWLPAQNTYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C FQ+RR+ +R+R+ K + HTLNGSG+AVGR L+A+LENY ADGSV +P V Sbjct: 358 VSNCEAFQARRLQARFRNEGGK-PELVHTLNGSGLAVGRTLVAVLENYQQADGSVVVPEV 416 Query: 413 LRPYMNNLAVI 423 LRPYM L + Sbjct: 417 LRPYMGGLERL 427 >gi|145633678|ref|ZP_01789404.1| seryl-tRNA synthetase [Haemophilus influenzae 3655] gi|229845506|ref|ZP_04465635.1| seryl-tRNA synthetase [Haemophilus influenzae 6P18H1] gi|144985438|gb|EDJ92259.1| seryl-tRNA synthetase [Haemophilus influenzae 3655] gi|229811609|gb|EEP47309.1| seryl-tRNA synthetase [Haemophilus influenzae 6P18H1] Length = 429 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 191/431 (44%), Positives = 261/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + + + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMDDMGNQLTEAKAQLDAILAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P LR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGRLDVIGK 429 >gi|91793103|ref|YP_562754.1| seryl-tRNA synthetase [Shewanella denitrificans OS217] gi|123356823|sp|Q12NE5|SYS_SHEDO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|91715105|gb|ABE55031.1| seryl-tRNA synthetase [Shewanella denitrificans OS217] Length = 428 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 203/429 (47%), Positives = 267/429 (62%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R + L R + ++ L+E + L + E+++A RN+ S IGQ Sbjct: 1 MLDPKFLRTELDATAERLASRGFALDTAHLSQLEETRKSLQVETEELQASRNAISKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G V A+ + L +L + E E+ ++ + PN+P E VP G Sbjct: 61 AKSRG--EDVSAIMAQVGDLGSKLDAKKAELAELLHAINLIAMSTPNLPDESVPCGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G S ++H ++GEALG +DF A K++G+RF V+ G LA L RALGQ Sbjct: 119 ENLEVRRWGTPRSFDFPVKDHLDLGEALGGLDFKSAVKITGSRFIVMKGQLARLNRALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 FM+DLHT EHGYTE PLLV ++++ GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 FMLDLHTQEHGYTETYVPLLVNEDSLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I+E LPL+FT FRSEAGS GRDTRG++RQHQF K ELV I + ED Sbjct: 239 PLTNLVRDTIVEVSDLPLKFTAQTSCFRSEAGSYGRDTRGLIRQHQFEKVELVQIVKPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L L YR + LCTGD+GF A KTYDLEVWL QN YREISSCS Sbjct: 299 SMQALEELTLHAEKVLQLLGLPYRTMLLCTGDMGFGASKTYDLEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +RYR+P HTLNGSG+AVGR L+AILENY NADGS+T+P VL Sbjct: 359 NMKDFQARRMQARYRNPEDNKPALLHTLNGSGLAVGRTLVAILENYQNADGSITVPDVLH 418 Query: 415 PYMNNLAVI 423 YM +I Sbjct: 419 KYMGGTTLI 427 >gi|228476564|ref|ZP_04061246.1| seryl-tRNA synthetase [Streptococcus salivarius SK126] gi|228251759|gb|EEK10824.1| seryl-tRNA synthetase [Streptococcus salivarius SK126] Length = 425 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 269/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + L L R + + + LD K R L+ K E+++A+RN S I Sbjct: 1 MLDVKRIRNDFDALAEKLATRGVAAETLNELKELDVKRRELLIKSEELKAQRNIASDGIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + ++ ++ E + L ++ +PN P + VP+G Sbjct: 61 QAKR--NKEDASEQIAAMQKVSAEIKEIDAELAAIDEKLNAIVVTLPNTPNDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPREFDFEVKAHWDLGEDLGILDWERGAKVTGSRFLFYKGLGAKLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTE+ P +V ++M+GTGQ PKF +D F ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEMITPYMVNHDSMFGTGQYPKFKEDTFELDGTDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V ++ EDS+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPEDSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVVNAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVISPK 425 >gi|78485113|ref|YP_391038.1| seryl-tRNA synthetase [Thiomicrospira crunogena XCL-2] gi|123755256|sp|Q31HK9|SYS_THICR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|78363399|gb|ABB41364.1| seryl-tRNA synthetase [Thiomicrospira crunogena XCL-2] Length = 428 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 190/432 (43%), Positives = 273/432 (63%), Gaps = 13/432 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + E + LK R + I L+ K + K ++++A RNS S IG+ Sbjct: 1 MLDSKLLRTDLETVAAKLKTRGFVLDTAQIDELEAKRKDWQVKTQELQAERNSRSKGIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L +E + L +QL + + + ++ + + IPN+P + P+G S + Sbjct: 61 AKAAG--EDIQPLLDEVANLGDQLEEAKHASDAIQAEIELIYAGIPNLPHDSTPVGNSED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H ++ EA G D D A K++ +RFSVL G +A L+RAL Q Sbjct: 119 DNVEVRQWGTPKTFDFDIKDHVDLAEARGWYDNDAAVKIASSRFSVLKGPMAKLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---------RWLIPT 231 FM+D HT + GY EV P LV ++++GTGQ+PKF D++ +LIPT Sbjct: 179 FMLDSHT-DAGYEEVYVPFLVNQDSLHGTGQLPKFEADLYKIDKHEEHDTSDRDLYLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV +TNL+ EII+ +LPL+FT P FRSEAGS GRDT+G++RQHQF K E+V I Sbjct: 238 AEVPVTNLFRDEIIDEDTLPLKFTAHTPCFRSEAGSYGRDTKGLIRQHQFEKVEMVQIVH 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 + S+ E + AE IL++L+L YRV+SLCTGD+GFSA KTYDLEVWL GQ YREIS Sbjct: 298 PDQSYEALESLTQQAESILQKLELPYRVMSLCTGDIGFSAAKTYDLEVWLPGQQAYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS +FQ+RR+ +R+R + HTLNGSG+AVGR L+A+LENY NADGS+T+PT Sbjct: 358 SCSNFEDFQARRLKARFR-KGQDKPQLAHTLNGSGLAVGRTLVAVLENYQNADGSITVPT 416 Query: 412 VLRPYMNNLAVI 423 LR Y+ + ++ Sbjct: 417 ALRSYLGGVEIL 428 >gi|229823127|ref|ZP_04449196.1| hypothetical protein GCWU000282_00424 [Catonella morbi ATCC 51271] gi|229787293|gb|EEP23407.1| hypothetical protein GCWU000282_00424 [Catonella morbi ATCC 51271] Length = 426 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 193/429 (44%), Positives = 267/429 (62%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD + +R+ E + L R ++ + E LD + R L+ +E + RN S +I Sbjct: 1 MLDRKLLREQFEWVVEKLATRGVDREVLENYRRLDSERRELLIDVEGAKQYRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D E + +++ ++ ++ + L+ + +PN+P E VP+G Sbjct: 61 QLKR--NKENADDKIAEMKEIGDRIKRDDERLAQIEADLEAIEHRLPNLPAEGVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G H+EI E L ++DF+R K+SG+RF G A LERA+ Sbjct: 119 EDNVEVRRWGTPREFDFTPLNHWEIAEKLDIIDFERGAKVSGSRFVFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--RWLIPTSEVSLT 237 FM+D HT +GY E+ P +V D++M+GTGQ PKF +D F D LIPT+EV LT Sbjct: 179 NFMLDTHTQHNGYQEIIPPYMVNDQSMFGTGQYPKFVEDTFRVNDERGLTLIPTAEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y++EI+ ++LP++FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + SF Sbjct: 239 NYYANEILPLENLPIKFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKYAHPDHSFE 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E M AE IL+ L L YRV++LCTGD+GFSA KTYDLEVW+ GQ+ YREISSCS CG Sbjct: 299 ELESMTQNAEGILQALGLPYRVITLCTGDMGFSATKTYDLEVWIPGQDTYREISSCSNCG 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R+R+ K +++ HTLNGSG+AVGR +AILENY ADGSV IP L PYM Sbjct: 359 DFQARRAKIRFRNAEDK-VEYVHTLNGSGLAVGRTFVAILENYQQADGSVKIPEALVPYM 417 Query: 418 NNLAVIKKE 426 N + I + Sbjct: 418 NGITEIPAK 426 >gi|20806566|ref|NP_621737.1| seryl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|254478338|ref|ZP_05091717.1| seryl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] gi|30173181|sp|Q8RDJ5|SYS_THETN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|20515006|gb|AAM23341.1| Seryl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|214035696|gb|EEB76391.1| seryl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] Length = 425 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 276/427 (64%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++IR NP+ + A++ + + + +L LDEK R ++ ++E ++ +RN+ S I + Sbjct: 1 MLDIKFIRSNPDVVRRAIELKGEKADLDRLLLLDEKRREMLVELEALKNKRNTESDNIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG L + L +++ +E+E E+ ++K++ IPN+P E VPIG S Sbjct: 61 LKREGK--DASELIAKMKELSDKIKDMEQELREIEEEMEKILWTIPNIPHESVPIGESDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + H+EIGEALG++DF+ A++++G+RF G A LERAL Sbjct: 119 DNVEVRRWGEPRKFDFEPKPHWEIGEALGILDFEAASRVTGSRFVFYKGLGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLH +HGY EV P LV +M+GTGQ+PKF +D F + IPT+EV +TNL Sbjct: 179 FMLDLHIEKHGYKEVFPPFLVHRRSMFGTGQLPKFEEDAFKVEGTDYFLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y II+ + LP+ + FR EAG+AGRDTRG++RQHQF K ELV T + S+ E Sbjct: 239 YRETIIDGEQLPIYHCAYSACFRQEAGAAGRDTRGLIRQHQFDKVELVKFTEPDKSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M AEE+L+ L L YRVV++CTGDLGF+A K YD+EVW+ Y EISSCS C +F Sbjct: 299 EKMTRDAEEVLQALGLPYRVVAICTGDLGFTASKKYDIEVWMPSYGRYVEISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYR L++ HTLNGSGVAVGR AILENY DGSV +P VLRPYM Sbjct: 359 QARRANIRYRPKGGGKLQYVHTLNGSGVAVGRTFAAILENYQQEDGSVVVPEVLRPYMK- 417 Query: 420 LAVIKKE 426 + VI+KE Sbjct: 418 VDVIRKE 424 >gi|326563744|gb|EGE13995.1| seryl-tRNA synthetase [Moraxella catarrhalis 46P47B1] gi|326566764|gb|EGE16903.1| seryl-tRNA synthetase [Moraxella catarrhalis 103P14B1] gi|326567394|gb|EGE17509.1| seryl-tRNA synthetase [Moraxella catarrhalis BC1] gi|326569919|gb|EGE19969.1| seryl-tRNA synthetase [Moraxella catarrhalis BC8] gi|326571480|gb|EGE21495.1| seryl-tRNA synthetase [Moraxella catarrhalis BC7] gi|326575237|gb|EGE25165.1| seryl-tRNA synthetase [Moraxella catarrhalis CO72] gi|326576676|gb|EGE26583.1| seryl-tRNA synthetase [Moraxella catarrhalis 101P30B1] Length = 422 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 278/425 (65%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R N E L L R + + ++ + + + K E ++A++N+ + ++G+ Sbjct: 1 MLDPKFLRGNLEELKAKLAVRGYDLDVAFWQEVENQRKSIQVKTEALQAKKNAGAKKVGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L N+ + E + E E E+ +++ IPN+P + VP+G+ Sbjct: 61 LKRHG--EDTSELMNQMQLVSEAMKAAENELKELQNTITTAALQIPNLPDDSVPVGSDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H +IGE+LG +DF+ A KL+GARFSVL GHLA L RAL Q Sbjct: 119 DNVEVRRWGVPREFDFAIKDHTDIGESLGQLDFELAAKLTGARFSVLKGHLAKLNRALVQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE+ P +V +++ GTGQ+PKF +D+F +LIPTSEV LTN Sbjct: 179 FMLDTHTQKYGYTEMYVPYMVNSDSLQGTGQLPKFEEDLFKLRGEKEYYLIPTSEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I+ K LP++ T P FRSEAGSAGRDTRG++RQHQF K E+V +TR + S Sbjct: 239 SVRDTILSPKDLPIKLTAHTPCFRSEAGSAGRDTRGLIRQHQFEKVEMVQVTRADSSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE +L+ L+L YRV++LCTGD+GFSA KTYD+EVWL QN+YREISSCS CG+ Sbjct: 299 LEDMTAQAEYVLQALELPYRVMTLCTGDMGFSAVKTYDIEVWLPSQNMYREISSCSNCGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM++R +D K + HTLNGSG+AVGR L+AILEN+ NADG++TIP L+PYM Sbjct: 359 FQARRMSARLKD--GKHSELVHTLNGSGLAVGRTLLAILENHQNADGTITIPKALQPYMG 416 Query: 419 NLAVI 423 L VI Sbjct: 417 GLEVI 421 >gi|251783202|ref|YP_002997507.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391834|dbj|BAH82293.1| seryl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 425 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 194/428 (45%), Positives = 271/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + ++ +LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDAVAAKLKIRGVSEDTLTHLKNLDEKRRALLVQSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + ++ + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDASQQIADMQNVSADIKTIDSQLADIDQQVTDIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVIALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADSKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|71904134|ref|YP_280937.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS6180] gi|123639382|sp|Q48RS8|SYS_STRPM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|71803229|gb|AAX72582.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS6180] Length = 425 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 194/428 (45%), Positives = 267/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + ++ LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDTVAAKLKNRGVSEDTLTHLKELDEKRRALLVQSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + + + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDATQQIADMQKVSADIKTIDNQLVAIDQQVTDIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV+SLCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLR YM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRSYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|49482262|ref|YP_039486.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|221141524|ref|ZP_03566017.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|257424205|ref|ZP_05600634.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257426882|ref|ZP_05603284.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257429518|ref|ZP_05605905.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257432165|ref|ZP_05608528.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257435126|ref|ZP_05611177.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282907056|ref|ZP_06314904.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282910035|ref|ZP_06317843.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282912283|ref|ZP_06320079.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282912923|ref|ZP_06320715.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282922551|ref|ZP_06330241.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|283959493|ref|ZP_06376934.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|293497976|ref|ZP_06665830.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293511566|ref|ZP_06670260.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293550175|ref|ZP_06672847.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|295429306|ref|ZP_06821928.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589192|ref|ZP_06947833.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|304379957|ref|ZP_07362686.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|56749429|sp|Q6GKT6|SYS_STAAR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|49240391|emb|CAG39037.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257273223|gb|EEV05325.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257276513|gb|EEV07964.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257279999|gb|EEV10586.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257283044|gb|EEV13176.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257285722|gb|EEV15838.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|269939535|emb|CBI47893.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] gi|282314772|gb|EFB45158.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282323023|gb|EFB53342.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282323979|gb|EFB54295.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282326101|gb|EFB56406.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329955|gb|EFB59476.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|283789085|gb|EFC27912.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|290919222|gb|EFD96298.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291096907|gb|EFE27165.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291465524|gb|EFF08056.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|295127065|gb|EFG56709.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297577703|gb|EFH96416.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|302749920|gb|ADL64097.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341537|gb|EFM07447.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436850|gb|ADQ75921.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60] gi|315195235|gb|EFU25623.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00] gi|329312733|gb|AEB87146.1| Seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] Length = 428 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ S + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDSKMTGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|190574986|ref|YP_001972831.1| seryl-tRNA synthetase [Stenotrophomonas maltophilia K279a] gi|229559993|sp|B2FKE4|SYS_STRMK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|190012908|emb|CAQ46540.1| putative seryl-tRNA synthetase [Stenotrophomonas maltophilia K279a] Length = 426 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 209/427 (48%), Positives = 276/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R P L L+ R E + SL+ + + + +++++ RNS S IG Sbjct: 1 MLDPALLRHQPADLAERLRTSRGFELDVSALESLEADRKRIQVRTQELQSLRNSRSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V A+ E + ++L E E+ ++ + IPN+P ++VP G Sbjct: 61 QAKAKG--EDVSAIMAEVAAFADELKASEVALDELREKIEAISMGIPNLPADDVPAGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ G +H E+G G +D + A KLSG+RF+VL G +A L RAL Sbjct: 119 NDNVEQSRWGTPRQFDFKVLDHVELGARNGWLDGETAAKLSGSRFTVLRGPIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSL 236 QFM+DLHT EHGY E + PLLV +++ GT Q+PKF DD+F T R+LIPTSEV L Sbjct: 179 QFMVDLHTGEHGYEETNVPLLVNADSLRGTSQLPKFEDDLFKTAVGDSTRYLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EI++++ LPLR T + FR+EAGS GRD RGM+RQHQF K ELVSI+R EDS Sbjct: 239 TNIVRDEIVDAERLPLRMTAHSMCFRAEAGSGGRDVRGMIRQHQFEKVELVSISRPEDSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L++L L YR V LCTGD+GFSA KTYDLEVWL Q YREISSCS C Sbjct: 299 AEHQRMTRCAEVVLEKLGLPYRKVLLCTGDMGFSAVKTYDLEVWLPSQETYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSGVAVGR +IA++ENY NADGS+T+P LRPY Sbjct: 359 GDFQARRMQARWRNPATGKPELAHTLNGSGVAVGRAMIAVMENYQNADGSITVPEALRPY 418 Query: 417 MNNLAVI 423 M L I Sbjct: 419 MGGLETI 425 >gi|326577649|gb|EGE27526.1| seryl-tRNA synthetase [Moraxella catarrhalis O35E] Length = 422 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 196/425 (46%), Positives = 278/425 (65%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R N E L L R + + ++ + + + K E ++A++N+ + ++G+ Sbjct: 1 MLDPKFLRGNLEELKAKLAVRGYDLDVAFWQEVENQRKSIQVKTEALQAKKNAGAKKVGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L N+ + E + E E E+ +++ IPN+P + VP+G+ Sbjct: 61 LKRHG--EDTSELMNQMQLVSEAMKAAENELKELQNTITTAALQIPNLPDDSVPVGSDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H +IGE+LG +DF+ A KL+GARFSVL GHLA L RAL Q Sbjct: 119 DNVEVRRWGVPREFDFAIKDHADIGESLGQLDFELAAKLTGARFSVLKGHLAKLNRALVQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE+ P +V +++ GTGQ+PKF +D+F +LIPTSEV LTN Sbjct: 179 FMLDTHTQKYGYTEMYVPYMVNSDSLQGTGQLPKFEEDLFKLRGEKEYYLIPTSEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I+ + LP++ T P FRSEAGSAGRDTRG++RQHQF K E+V +TR + S Sbjct: 239 SVRDTILSPRDLPIKLTAHTPCFRSEAGSAGRDTRGLIRQHQFEKVEMVQVTRADSSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE +L+ L+L YRV++LCTGD+GFSA KTYD+EVWL QN+YREISSCS CG+ Sbjct: 299 LEDMTAQAEYVLQALELPYRVMTLCTGDMGFSAVKTYDIEVWLPSQNMYREISSCSNCGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM++R +D K + HTLNGSG+AVGR L+AILEN+ NADG++TIP L+PYM Sbjct: 359 FQARRMSARLKD--GKHSELVHTLNGSGLAVGRTLLAILENHQNADGTITIPKALQPYMG 416 Query: 419 NLAVI 423 L VI Sbjct: 417 GLEVI 421 >gi|221231277|ref|YP_002510429.1| seryl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|254783052|sp|B8ZLH8|SYS_STRPJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|220673737|emb|CAR68236.1| seryl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] Length = 424 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 274/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVTEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV L N Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLAN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|237738609|ref|ZP_04569090.1| seryl-tRNA synthetase [Fusobacterium sp. 2_1_31] gi|229424092|gb|EEO39139.1| seryl-tRNA synthetase [Fusobacterium sp. 2_1_31] Length = 421 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 199/425 (46%), Positives = 271/425 (63%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + ++LD K R ++ ++E ++ RN+ SA+I Sbjct: 1 MLELKFMRENVEMLKEMLKNRNSNIDMDAFVALDAKRREVLSEVETLKRDRNNVSAEIAN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E L + + ++ L+ E E+ +K + IPNV PIG + Sbjct: 61 LKKEKK--DASHLIEKMGGVSSKIKELDAELVEIDEEIKNIQMTIPNVYHPSTPIGPDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N IR G+ + H++IGE LG++DF+R KLSG+RF + G A LERAL Sbjct: 119 SNKEIRRWGEPRKFDFEPKAHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALIS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D HT EHGYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 179 FMLDTHTLEHGYTEHITPFIVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS GRD +G++R HQF K E+V IT E S+ E E Sbjct: 239 RKEILEQSELPKYYTAYSPCFRREAGSYGRDVKGLIRLHQFNKVEMVKITDAESSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 299 KMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +Y+ N +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM + Sbjct: 359 ARRMGLKYKVTNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGI 416 Query: 421 AVIKK 425 VIKK Sbjct: 417 DVIKK 421 >gi|332974398|gb|EGK11324.1| serine--tRNA ligase [Psychrobacter sp. 1501(2011)] Length = 432 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 192/436 (44%), Positives = 274/436 (62%), Gaps = 11/436 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +RQ+ L L KR E ++ ++ + + L ED++A+RN+ + Q+G Sbjct: 1 MIDPKLLRQDLTELKAKLAKRGYELDMDFWQQMESQRKSLQVITEDLQAKRNAGAKQVGV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L E + + E++ + + + IPN+P ++VP G S Sbjct: 61 LKKNG--EDASELLAEMQAVSGDIKKAEEDLKALQDKINEAALQIPNIPADDVPEGESEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++GE LG +DF A KL+G+RF+VLTG LA L RAL Q Sbjct: 119 DNVEVRKWGTPKQFDFEIKDHTDVGEGLGQLDFAAAAKLTGSRFNVLTGQLAQLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-------RWLIPTSE 233 FM++ HT ++GYTE P +V +++ GTGQ+PKF +D+F T+ +LIPT+E Sbjct: 179 FMLNTHTVKYGYTECYVPYIVNSDSLKGTGQLPKFEEDLFKLTNHTNNDGMGFYLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL E +++ LPL+FT P FRSEAGS GRDTRG++RQHQF K E+V+I Sbjct: 239 VPMTNLVRGERLDASQLPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFEKVEMVNIATAA 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E+M + AE IL++L+L YRVV LCTGD+GFSA +TYD+EVWL Q+ YREISSC Sbjct: 299 QSDELLEQMTAQAEYILQQLELPYRVVKLCTGDMGFSALRTYDIEVWLPSQDTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S CG+FQ+RRM +R +D K + HTLNGSG+AVGR L+AI+EN+ NADGS+TIP VL Sbjct: 359 SNCGDFQARRMGTRVKD--GKKTELAHTLNGSGLAVGRTLLAIMENHQNADGSITIPEVL 416 Query: 414 RPYMNNLAVIKKEHIL 429 RP+M I ++ Sbjct: 417 RPFMGGAETITASNLF 432 >gi|330685310|gb|EGG96971.1| serine--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 428 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + +L LDEK R LI K E+++A+RN S +I Sbjct: 1 MLDIKLFRTEPDKVKSKIELRGDDPKVVDEVLELDEKRRTLISKTEEMKAKRNKVSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E L + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 61 QKKR--NKENADDVIAEMRQLGDDIKEYDTQLNEIDNKMSDILCRIPNLINDDVPQGASD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ENI ++ G ++ H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EENIEVKKWGTPREFDFEAKAHWDIVEDLKMADFDRAAKISGARFVYLTRDGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRDEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ N+ + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDNAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I+K Sbjct: 419 GKTHIQK 425 >gi|152978776|ref|YP_001344405.1| seryl-tRNA synthetase [Actinobacillus succinogenes 130Z] gi|171704281|sp|A6VNC3|SYS_ACTSZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|150840499|gb|ABR74470.1| seryl-tRNA synthetase [Actinobacillus succinogenes 130Z] Length = 429 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 201/431 (46%), Positives = 265/431 (61%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N E LK KR+ + + L+E+ + L K E ++A RN S IG Sbjct: 1 MIDPNLLRNNLEETAQKLKEKRNFILDVKQLRKLEEQRKALQVKTETLQAERNLRSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G +++L NE L +L + +V + L ++ IPN+P +EVP G Sbjct: 61 AAKARG--ENIESLLNEVDHLGIELAQAKALFDDVSAELNTILLTIPNIPADEVPQGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN + G + ++H +GE + +DF KLSGARF+V+ G +A L RAL Sbjct: 119 TENQEVARWGTPRTFDFEVKDHVTLGENIDGLDFSAGVKLSGARFAVMKGRIAKLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----DGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEKHGYLETYVPYLVNHTTLYGTGQLPKFGEDLFHTKALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL EI+ ++LPL+ T P FRSEAGS GRDTRG++R HQF K E+V I E Sbjct: 239 PVTNLVRDEILSVENLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVEPEK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AEE+L+ L+L YR V LC+GD+GF ACKTYDLEVWL QN YREISSCS Sbjct: 299 SMEALEELTGHAEEVLRLLNLPYRKVLLCSGDMGFGACKTYDLEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLR Sbjct: 359 NMWDFQARRMQARCRAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLR 418 Query: 415 PYMNNLAVIKK 425 PYM+N+ I + Sbjct: 419 PYMDNVDTIGR 429 >gi|332306865|ref|YP_004434716.1| seryl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174194|gb|AEE23448.1| seryl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 432 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 191/430 (44%), Positives = 260/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R + L KR +L+EK + L + ++++ RN S IG+ Sbjct: 1 MLDAKYLRNDINIAAQKLNKRGYALDVAQFTALEEKRKALQMRTQELQNERNVRSKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E L ++L + + + ++ L+ IPN+P + VP G Sbjct: 61 AKASGQ--DIAPLLAEVGQLGDELDAAKAQLTVLLDEIQALVLNIPNLPDDSVPQGKDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGE-ALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + G ++H ++G +DF+ ATKL+G+RF V+ G +A L RA+ Sbjct: 119 ENVEVSRWGTPREFDFEVKDHVDLGAGVANGLDFETATKLTGSRFVVMRGQIARLNRAIA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSE 233 QFM+DLHT +HGY E+ P LV +E+M GTGQ PKF D F T LIPTSE Sbjct: 179 QFMLDLHTEQHGYQEMYVPYLVNEESMLGTGQFPKFVGDAFHTKPATEEGQGLSLIPTSE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTN+ I + LP++ T P FRSEAGS GRDTRG++RQHQF K E+V + + Sbjct: 239 VPLTNIARDCIFAASELPIKMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQLVEAD 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 SF E + AE++L+ L+L YR + LCTGD+GF ACKT+DLEVWL QN YREISSC Sbjct: 299 KSFEALEELTGHAEKVLQLLELPYRKMLLCTGDMGFGACKTFDLEVWLPAQNTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +RYRDP + + HTLNGSG+AVGR L+AILENY ADGS+TIP L Sbjct: 359 SNMFDFQARRMQARYRDPKTNKTELLHTLNGSGLAVGRTLVAILENYQQADGSITIPKAL 418 Query: 414 RPYMNNLAVI 423 +PYM + VI Sbjct: 419 QPYMKGVTVI 428 >gi|320106187|ref|YP_004181777.1| seryl-tRNA synthetase [Terriglobus saanensis SP1PR4] gi|319924708|gb|ADV81783.1| seryl-tRNA synthetase [Terriglobus saanensis SP1PR4] Length = 440 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 204/440 (46%), Positives = 281/440 (63%), Gaps = 16/440 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD+ ++R N ++ L+ R+++P S+D + R I ++E ++A+RN + ++ Sbjct: 1 MLDLAYVRANLAAVEEKLRSRNMDPAAVLGDFASIDTERREAITRLESLKAQRNRIAEEV 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ G AL ++T LK++ LE + L+ ++ IPN+P + VPIG Sbjct: 61 GKKKRAG--EDATALMDQTRALKDEAESLEAAAAQADLRLQTILHAIPNLPHDSVPIGKD 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++NI+ +S G P+ + H+EIGEALG++DF+RA K+SG+RF V G A LERAL Sbjct: 119 EHDNIVEKSWGAIPTFDFAPKSHWEIGEALGILDFNRAAKISGSRFVVHFGAGARLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------------TTDGR 226 FM+DLHT HGYTEV P +V +++YGTGQ+PKFA+D+F + Sbjct: 179 ANFMLDLHTRLHGYTEVLPPFMVNSKSLYGTGQLPKFAEDLFHSDDKGSYVPGELQDNDH 238 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 WLIPT+EV +TNL E I+ LP+ + P FRSEAGS G+D RGM+RQHQF K EL Sbjct: 239 WLIPTAEVPVTNLLRDETIDEVKLPISYCAWTPCFRSEAGSYGKDVRGMIRQHQFQKVEL 298 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 V DS EHE++ AE +L+ L L YR + LCTGD+GFS+ KTYDLEVWL GQNL Sbjct: 299 VKFATPADSEFEHEKLTRHAETVLELLKLPYRRMLLCTGDMGFSSAKTYDLEVWLPGQNL 358 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 YREISSCS +FQ+RR N R+R P +K ++ HT+NGSG+AVGR +A+LENY ADG+ Sbjct: 359 YREISSCSNFLDFQARRANIRFRSPAAKKSEYLHTINGSGLAVGRTYLAVLENYQQADGT 418 Query: 407 VTIPTVLRPYMNNLAVIKKE 426 V IP VL PYM+ VI E Sbjct: 419 VRIPEVLVPYMHGDTVITPE 438 >gi|302877502|ref|YP_003846066.1| seryl-tRNA synthetase [Gallionella capsiferriformans ES-2] gi|302580291|gb|ADL54302.1| seryl-tRNA synthetase [Gallionella capsiferriformans ES-2] Length = 431 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 206/431 (47%), Positives = 279/431 (64%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + + L R + L+ + + + ++++++RNS S IGQ Sbjct: 1 MLDIQVLRSDLDGVAARLATRGFVLDTARFGELEAARKAIQVRTQELQSKRNSASKLIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G A+ E + + E+L +E + + L++L+ +PN+P E VPIG S Sbjct: 61 AKAKG--EDTTAIMAEVTLVGEELKSIEVQLGALQGQLQQLLEGLPNMPHESVPIGGSEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G P ++H E+GEALG +DF+ A K+SGARFSVL G LA L RAL Q Sbjct: 119 DNVEVRKSGSVPVFDFAVKDHVELGEALGGLDFETAAKISGARFSVLKGGLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPTS 232 FM+D HT HGYTEV P LV ++M GTGQ+PKF +D+F +LIPT+ Sbjct: 179 FMLDTHTDTHGYTEVYVPYLVNADSMRGTGQLPKFEEDLFAVPRQMGEGGMQNFYLIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TN+ EII + LPL++ P FRSEAGSAGRDTRG++RQHQF K ELV I Sbjct: 239 EVPVTNMVRDEIIPLEQLPLKYVAHTPCFRSEAGSAGRDTRGLIRQHQFEKVELVQIVHP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 +DS+ E++L AE IL++L LHYRVV LCTGD+GFS+ TYD+EVWL QN YREISS Sbjct: 299 DDSYAALEQLLGHAEAILQKLGLHYRVVRLCTGDIGFSSATTYDIEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS FQ+RR+ +R++ K + HTLNGSG+AVGR L+A+LEN ADGS++IP V Sbjct: 359 CSNFEAFQARRLQARFKSGTGK-PELLHTLNGSGLAVGRTLVAVLENNQLADGSISIPEV 417 Query: 413 LRPYMNNLAVI 423 LRPYM LAV+ Sbjct: 418 LRPYMGGLAVL 428 >gi|57651117|ref|YP_184920.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87160901|ref|YP_492731.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88193832|ref|YP_498617.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220220|ref|YP_001331043.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|161508275|ref|YP_001573934.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253730408|ref|ZP_04864573.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733830|ref|ZP_04867995.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|258451358|ref|ZP_05699389.1| seryl-tRNA synthetase [Staphylococcus aureus A5948] gi|262049439|ref|ZP_06022311.1| seryl-tRNA synthetase [Staphylococcus aureus D30] gi|262051875|ref|ZP_06024090.1| seryl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|282920728|ref|ZP_06328447.1| seryl-tRNA synthetase [Staphylococcus aureus A9765] gi|284023046|ref|ZP_06377444.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|294849837|ref|ZP_06790577.1| seryl-tRNA synthetase [Staphylococcus aureus A9754] gi|2501053|sp|P95689|SYS_STAA8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67461619|sp|Q5HJY7|SYS_STAAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123487796|sp|Q2FKP7|SYS_STAA3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|172048753|sp|A6QD48|SYS_STAAE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083592|sp|A8YYT2|SYS_STAAT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|1835218|emb|CAA71057.1| seryl-trna synthetase [Staphylococcus aureus] gi|57285303|gb|AAW37397.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87126875|gb|ABD21389.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201390|gb|ABD29200.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373020|dbj|BAF66280.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|160367084|gb|ABX28055.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725888|gb|EES94617.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728133|gb|EES96862.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257860888|gb|EEV83705.1| seryl-tRNA synthetase [Staphylococcus aureus A5948] gi|259160202|gb|EEW45231.1| seryl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|259162436|gb|EEW47006.1| seryl-tRNA synthetase [Staphylococcus aureus D30] gi|282594136|gb|EFB99124.1| seryl-tRNA synthetase [Staphylococcus aureus A9765] gi|283469238|emb|CAQ48449.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] gi|294823385|gb|EFG39814.1| seryl-tRNA synthetase [Staphylococcus aureus A9754] gi|315197927|gb|EFU28260.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01] gi|320141426|gb|EFW33269.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|320144409|gb|EFW36174.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] gi|329731890|gb|EGG68250.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] Length = 428 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|325567669|ref|ZP_08144336.1| serine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325159102|gb|EGC71248.1| serine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 425 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 275/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN + L R ++ + + L+LDE+ R L+ + E+ + RN S +I Sbjct: 1 MLDVKMIRQNFAEVQSKLATRGVQKEVLDRFLTLDERRRELLVQTEERKKLRNEVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + Q+ L++E ++ +K++ + +PN+P + VP+G Sbjct: 61 ALKRA--KEDAADKIAQMKEVGSQIKQLDEEIAQIDEDIKEIATTLPNLPNDSVPVGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R + + H+EI E LG++DF+R K+SG+RF G A LERAL Sbjct: 119 DDNVEVRRWADPKTFAFEPKPHWEIAEDLGILDFERGAKVSGSRFVYYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVYEHGYTEMITPYIVNSQAMFGTGQFPKFKEDVFQLADTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+E + LP FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYQGEILEQEQLPAYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+IL++L+L YRV+SLCTGD+GFSA KTYDLEVW+ Q +YREISSCS C + Sbjct: 299 LEKMTANAEDILQKLNLPYRVLSLCTGDMGFSAAKTYDLEVWIPAQEMYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD K + + HTLNGSG+AVGR + A+LENY N DGSVT+P VL PYM Sbjct: 359 FQARRAMIRYRDQEGK-IHYMHTLNGSGLAVGRTVAAVLENYQNEDGSVTVPEVLVPYMG 417 Query: 419 NLAVIKK 425 L I+K Sbjct: 418 GLTKIEK 424 >gi|289551842|ref|YP_003472746.1| Seryl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|289181373|gb|ADC88618.1| Seryl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] Length = 427 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + +K R +P+ + +L LDE+ R LI + E+++A RN S QI Sbjct: 1 MLDIRLFRTEPEKVKDKIKLRGDDPKVVDDVLQLDEQRRKLIGQTEEMKANRNKVSEQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D + E L +++ ++ + +E+ + +K + IPN+ ++VP G S Sbjct: 61 EKKR--NQENADDVIKEMRELGDKIKEIDTKLNEIDNKIKDTLIRIPNLIHDDVPQGASD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + +F+RA K+SGARF LT A LERAL Sbjct: 119 EENVELKKWGTPRDFDFEPKAHWDLVEELNMANFERAAKVSGARFVYLTKDGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 YYRDEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELKLPYRRVILCTGDIGFSAAKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ ++ + HTLNGSG+AVGR AI+ENY NADGS+TIP L P+M Sbjct: 359 FQARRANIRFKRDHAAKPELAHTLNGSGLAVGRTFAAIVENYQNADGSITIPEALVPFMG 418 Query: 419 NLAVIKK 425 IK Sbjct: 419 GKTEIKP 425 >gi|15922999|ref|NP_370533.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|15925714|ref|NP_373247.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|148266456|ref|YP_001245399.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150392489|ref|YP_001315164.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156978340|ref|YP_001440599.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|253316847|ref|ZP_04840060.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|254663943|ref|ZP_05143415.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793547|ref|ZP_05642526.1| seryl-tRNA synthetase [Staphylococcus aureus A9781] gi|258411147|ref|ZP_05681426.1| seryl-tRNA synthetase [Staphylococcus aureus A9763] gi|258420949|ref|ZP_05683883.1| seryl-tRNA synthetase [Staphylococcus aureus A9719] gi|258438588|ref|ZP_05689811.1| seryl-tRNA synthetase [Staphylococcus aureus A9299] gi|258443956|ref|ZP_05692294.1| seryl-tRNA synthetase [Staphylococcus aureus A8115] gi|258446228|ref|ZP_05694388.1| seryl-tRNA synthetase [Staphylococcus aureus A6300] gi|258449113|ref|ZP_05697219.1| seryl-tRNA synthetase [Staphylococcus aureus A6224] gi|258454409|ref|ZP_05702377.1| seryl-tRNA synthetase [Staphylococcus aureus A5937] gi|269201699|ref|YP_003280968.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282894288|ref|ZP_06302518.1| seryl-tRNA synthetase [Staphylococcus aureus A8117] gi|282927759|ref|ZP_06335373.1| seryl-tRNA synthetase [Staphylococcus aureus A10102] gi|295406873|ref|ZP_06816677.1| seryl-tRNA synthetase [Staphylococcus aureus A8819] gi|296275678|ref|ZP_06858185.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297245908|ref|ZP_06929770.1| seryl-tRNA synthetase [Staphylococcus aureus A8796] gi|46577645|sp|P61083|SYS_STAAM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|46577646|sp|P99178|SYS_STAAN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166223293|sp|A7WWP0|SYS_STAA1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083590|sp|A6TXF9|SYS_STAA2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083591|sp|A5INQ0|SYS_STAA9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|13699926|dbj|BAB41225.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|14245776|dbj|BAB56171.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|147739525|gb|ABQ47823.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149944941|gb|ABR50877.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156720475|dbj|BAF76892.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|257787519|gb|EEV25859.1| seryl-tRNA synthetase [Staphylococcus aureus A9781] gi|257840032|gb|EEV64497.1| seryl-tRNA synthetase [Staphylococcus aureus A9763] gi|257843139|gb|EEV67554.1| seryl-tRNA synthetase [Staphylococcus aureus A9719] gi|257848147|gb|EEV72139.1| seryl-tRNA synthetase [Staphylococcus aureus A9299] gi|257850840|gb|EEV74784.1| seryl-tRNA synthetase [Staphylococcus aureus A8115] gi|257855054|gb|EEV77997.1| seryl-tRNA synthetase [Staphylococcus aureus A6300] gi|257857546|gb|EEV80441.1| seryl-tRNA synthetase [Staphylococcus aureus A6224] gi|257863503|gb|EEV86263.1| seryl-tRNA synthetase [Staphylococcus aureus A5937] gi|262073989|gb|ACY09962.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282590519|gb|EFB95597.1| seryl-tRNA synthetase [Staphylococcus aureus A10102] gi|282763333|gb|EFC03463.1| seryl-tRNA synthetase [Staphylococcus aureus A8117] gi|285815736|gb|ADC36223.1| Seryl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|294968338|gb|EFG44363.1| seryl-tRNA synthetase [Staphylococcus aureus A8819] gi|297177273|gb|EFH36526.1| seryl-tRNA synthetase [Staphylococcus aureus A8796] gi|312828572|emb|CBX33414.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129552|gb|EFT85544.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03] gi|329725506|gb|EGG61985.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] Length = 428 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 196/427 (45%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYD+EVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDIEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|303240067|ref|ZP_07326588.1| seryl-tRNA synthetase [Acetivibrio cellulolyticus CD2] gi|302592336|gb|EFL62063.1| seryl-tRNA synthetase [Acetivibrio cellulolyticus CD2] Length = 423 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 191/425 (44%), Positives = 266/425 (62%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR NP+ L AL KR ILSLDEK R ++ ++E ++ ++NS+S + Sbjct: 1 MLDIKLIRSNPDILKKALLKRKDSFDVNQILSLDEKRRQILVEVEQLKNKQNSDSKMVPI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG V L E L +++ L+ + ++ L K++ IPN+P VP G + + Sbjct: 61 YKKEGK--DVAPLMEEMKNLSDKIKTLDYQVKDIDDELVKILLTIPNIPNSTVPDGDTDD 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ + H++IGE LG++DF A K++GARF+ G A LER+L Sbjct: 119 DNVEIRKWGEPKKFNFEPKAHWDIGEKLGILDFSAAAKVTGARFTFYKGLGARLERSLMN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLHT +HGYTEV P +V +M GTGQ+PKF +D F + + IPT+EV +TN+ Sbjct: 179 FMLDLHTGKHGYTEVFPPFMVHRNSMIGTGQLPKFEEDAFKVANNDYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y +I+++K LP++ + FR+EAG+AGRDTRG++RQHQF K ELV T E S+ E Sbjct: 239 YREQILDAKELPIKHAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTTPETSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AEE+L+ L + YRVV +C GDLGF+A YD+EVW+ N Y EISSCS +F Sbjct: 299 EALTRDAEEVLQILGIPYRVVKICVGDLGFTAAMKYDIEVWMPSYNRYVEISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR ++R + +F HTLNGSGVA+GR ILENY DGSV IP L YMN Sbjct: 359 QARRAGIKFRRSANDKPEFVHTLNGSGVAIGRTTACILENYQQEDGSVVIPEALLKYMNG 418 Query: 420 LAVIK 424 + VIK Sbjct: 419 VDVIK 423 >gi|257875866|ref|ZP_05655519.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257810032|gb|EEV38852.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 425 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 277/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN + L R ++ + + L+LDE+ R L+ + E+ + RN S++I Sbjct: 1 MLDVKMIRQNFAEVQSKLATRGVQKEVLDRFLTLDERRRELLVQTEERKKLRNDVSSEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + Q+ L++E ++ +K++ + +PN+P + VP+G Sbjct: 61 ALKRA--KEDAADKIAQMKEVGSQIKQLDEEIAQIDEDIKEIATTLPNLPNDSVPVGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR + + + H+EI E LG++DF+R K+SG+RF G A LERAL Sbjct: 119 DDNVEIRRWAEPKTFDFEPKPHWEIAEDLGILDFERGAKVSGSRFVYYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVYEHGYTEMITPYIVNSQAMFGTGQFPKFKEDVFQLADTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+E + LP FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + + S+ E Sbjct: 239 YYQGEILEQEQLPAYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDADHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+IL++L+L YRV+SLCTGD+GFSA KTYDLEVW+ Q +YREISSCS C + Sbjct: 299 LEKMTANAEDILQKLNLPYRVLSLCTGDMGFSAAKTYDLEVWIPAQEMYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD K + + HTLNGSG+AVGR + A+LENY N DGSVT+P VL PYM Sbjct: 359 FQARRAMIRYRDQEGK-IHYMHTLNGSGLAVGRTVAAVLENYQNEDGSVTVPEVLVPYMG 417 Query: 419 NLAVIKK 425 L I+K Sbjct: 418 GLTKIEK 424 >gi|51891148|ref|YP_073839.1| seryl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] gi|67461732|sp|Q67TJ8|SYS_SYMTH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|51854837|dbj|BAD38995.1| seryl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] Length = 421 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 175/417 (41%), Positives = 262/417 (62%), Gaps = 5/417 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R NP+ + AL + + + IL+LD + R ++ ++E ++ARRN S Q+G Sbjct: 1 MLDLRFVRTNPDVVRQALINKGVSVDLDRILALDVERRQILAEVEQLKARRNQVSKQVGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G V A+ E + +++ L+ E +V L+ L+ +PN+P +VP+G Sbjct: 61 LKQQGQ--DVSAIIAEMGAIGDRIKELDDRERQVSDELQDLLYQLPNLPAPDVPVGPDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ ++ G+ + H+++G A+ +DF+RA K++G+RFS + G LA L RAL Sbjct: 119 GNVEVKRWGEPRQFAFPVKPHWDLGVAMDGLDFERAAKVTGSRFSFIKGGLARLHRALVS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW-LIPTSEVSLTNL 239 F ID T E GY EV P+++ + YG+GQ PKF +D+F + L T+EV L N+ Sbjct: 179 FFIDYLT-ERGYREVLPPVIINTASYYGSGQFPKFKEDVFSLAGTDYHLASTAEVPLVNM 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ LPLR+ + FRSEAG+AGRDTRG++RQH F K E+V TR E+S Sbjct: 238 HRDEILDEAVLPLRYVGYSGCFRSEAGAAGRDTRGLIRQHYFEKVEMVQFTRPEESEQAL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++ AE +L++L+L YR + +CTGD+GF K YD+EVW+ Y EISSCS +F Sbjct: 298 MEIVANAEGMLEQLNLPYRRMLMCTGDMGFGQYKKYDIEVWMPSYERYVEISSCSNMSDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 Q+RR N RYR K +F HTLNGSG+AVGR L A++ENY N DGS+T+P VLRPY Sbjct: 358 QARRANIRYRPAGGK-PEFVHTLNGSGLAVGRTLAAVMENYQNEDGSITVPEVLRPY 413 >gi|254973664|ref|ZP_05270136.1| seryl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255091055|ref|ZP_05320533.1| seryl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255312709|ref|ZP_05354292.1| seryl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255515469|ref|ZP_05383145.1| seryl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255648561|ref|ZP_05395463.1| seryl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|260681783|ref|YP_003213068.1| seryl-tRNA synthetase [Clostridium difficile CD196] gi|260685380|ref|YP_003216513.1| seryl-tRNA synthetase [Clostridium difficile R20291] gi|306518690|ref|ZP_07405037.1| seryl-tRNA synthetase [Clostridium difficile QCD-32g58] gi|260207946|emb|CBA60065.1| seryl-tRNA synthetase [Clostridium difficile CD196] gi|260211396|emb|CBE01468.1| seryl-tRNA synthetase [Clostridium difficile R20291] Length = 423 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 274/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + + A+++R E + ++ LD K R +++++E ++ N NS +I Sbjct: 1 MLDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q I EG V K L +++ ++++ EV + ++ + IPNVP EVP G + Sbjct: 61 QLIKEGK--DVTEEKTRLKELSDKIKGIDEKVKEVEAKMEYTLMRIPNVPHPEVPQGETD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR+ G+ + H++IG LG++DF+RA K++G+RF++ G A LER+L Sbjct: 119 EDNVQIRTWGEPTKFDFEYKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGARLERSLM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 F ++ HT++HGYTEV P + + GTGQ+PKF +DMF + IPT+EV +TN Sbjct: 179 NFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDMFKIEGLEYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++++EI++ LP+++ P FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 IHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDSYNE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE +L+ L L YRVV +CTGDLGF+A YDLEVW+ N Y EISSCS + Sbjct: 299 LESLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFKYDLEVWMPSYNRYVEISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R++ ++ HTLNGSG+A+GRCL AILENY ADGSV +P LRPYM Sbjct: 359 FQARRAGIRFKRDKKSKAEYVHTLNGSGLAIGRCLAAILENYQQADGSVVVPEELRPYM- 417 Query: 419 NLAVIK 424 + VIK Sbjct: 418 GVDVIK 423 >gi|228475643|ref|ZP_04060361.1| serine--tRNA ligase [Staphylococcus hominis SK119] gi|314935208|ref|ZP_07842561.1| serine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|228270425|gb|EEK11860.1| serine--tRNA ligase [Staphylococcus hominis SK119] gi|313656543|gb|EFS20282.1| serine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 427 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 190/427 (44%), Positives = 263/427 (61%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R + + ++ R + + + +L LD + R LI K E+++ARRN S QI Sbjct: 1 MLDIKQFRDETDKVKSKIELRGDDSKVVDEVLELDNQRRDLIGKTEEMKARRNKVSDQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D + E L +++ + + +EV + ++ ++ IPN+ ++VP G Sbjct: 61 EKKR--NKEDADDVIKEMRELGDEIKENDAKLNEVDNKIRDILIRIPNLIADDVPQGADD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + DF+RA K+SGARF LT A LERAL Sbjct: 119 TENVELKKWGTPREFDFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +M+ HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPDVLPEKFTGQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L L YR V+LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEDMTQNAEAILEELKLPYRRVNLCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ S + HTLNGSG+AVGR AI+ENY N DGS+TIP L P+M Sbjct: 359 FQARRANIRFKRDASSKPELVHTLNGSGLAVGRTFAAIVENYQNEDGSITIPEALVPFMG 418 Query: 419 NLAVIKK 425 I+ Sbjct: 419 GKTEIRP 425 >gi|33152253|ref|NP_873606.1| seryl-tRNA synthetase [Haemophilus ducreyi 35000HP] gi|46577207|sp|Q7VM65|SYS_HAEDU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|33148475|gb|AAP95995.1| seryl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 435 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 200/436 (45%), Positives = 265/436 (60%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + + ALK KR+ + +L+E+ + L E ++A RN+ S IG Sbjct: 1 MIDQNLLRTNLDDVANALKLKRNFILDVNQVKALEEQRKTLQVTTETLQAERNARSKNIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E T+ QL I + E +V S +++L+ IPN+P EEVP+G Sbjct: 61 AAKARG--ENISQLLAEVDTMGNQLEIAKTELDKVQSEIRELLLTIPNLPAEEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N I G ++H +GE L +DF KL+ +RF V+ +A L RAL Sbjct: 119 SQNKEILRWGTPRQFDFEIKDHVTLGENLKGIDFPTGVKLTASRFVVMKDKIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------GRWL 228 QFM+DLH+ +HGY EV+ PLLV + +YGTGQ+PKF +D+F T L Sbjct: 179 QFMLDLHSEQHGYMEVNVPLLVNHDTLYGTGQLPKFGEDLFHTQPLTGQDPNEVQRPYGL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV LTNL EI++ SLP++ P FR+EAGS GRDTRG++R HQF K ELV Sbjct: 239 IPTAEVPLTNLVRDEIVDEDSLPIKLVAHTPCFRAEAGSYGRDTRGLIRMHQFEKVELVQ 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 I E S E + AE+IL+ L L YR V LCTGD+GF + KTYDLEVWL QN YR Sbjct: 299 IVAPEKSMEALEELTGQAEKILQLLHLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISSCS +FQ+RRM++R + K + HTLNGSG+AVGR L+A+LENY NADGS+T Sbjct: 359 EISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSIT 418 Query: 409 IPTVLRPYMNNLAVIK 424 IP VLRPYM I Sbjct: 419 IPEVLRPYMAGQEAIT 434 >gi|239617246|ref|YP_002940568.1| seryl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|259511674|sp|C5CGC3|SYS_KOSOT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|239506077|gb|ACR79564.1| seryl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 424 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 195/425 (45%), Positives = 275/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ +R+NPE + ALK R ++ + +L LD+ R I + +A RN S+QI Sbjct: 1 MIDIRLVRENPEKIRAALKNRCVDESILDELLELDKARREAISTSDRKKAERNKISSQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A A G+ +L L + + ++ L ++ ++ ++ + IPN+P E VP+G S Sbjct: 61 KAKASGDEALAKELMEKAKDISVEVKELSEKAKKLDEEMRNKLLYIPNIPHESVPVGESE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+++R G+ S H+++G LG+MDF+RA KLSG+RF +L LA LERAL Sbjct: 121 EDNVVVRKWGEPRQFDFDSLAHWDLGPNLGMMDFERAAKLSGSRFVILRKELARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FM+DLHT EHGY EV+ P LV+ E M TGQ+PKF ++ + T +LIPT+EV L Sbjct: 181 NFMLDLHTREHGYEEVALPHLVKRETMQATGQLPKFEEEAYKTDPDDMFLIPTAEVPLVA 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ LP ++T P +R EAGS G+D +GM+R HQF K ELV ++S+ Sbjct: 241 QHRDEILNLNELPRKYTAYTPCYRREAGSYGKDVKGMIRVHQFDKVELVWFVHPDESYEA 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AEE+LKRL L YRVV+LCTGDLGF+A KTYD+EVWL N Y+EISSCS + Sbjct: 301 LEKLTADAEEVLKRLGLPYRVVALCTGDLGFAAAKTYDIEVWLPSYNAYKEISSCSNVED 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+RD ++K LK+ HTLNGSG+AVGR L+AI+ENY DG + +P VL PYM Sbjct: 361 FQARRGNMRFRDKDNK-LKYVHTLNGSGLAVGRTLVAIVENYQLPDGRIRVPEVLVPYM- 418 Query: 419 NLAVI 423 VI Sbjct: 419 GTEVI 423 >gi|315659988|ref|ZP_07912846.1| serine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|315494889|gb|EFU83226.1| serine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 447 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + +K R +P+ + +L LDE+ R LI + E+++A RN S QI Sbjct: 21 MLDIRLFRTEPEKVKDKIKLRGDDPKVVDDVLQLDEQRRKLIGQTEEMKANRNKVSEQIA 80 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D + E L +++ ++ + +E+ + +K + IPN+ ++VP G S Sbjct: 81 EKKR--NQENADDVIKEMRELGDKIKEIDTKLNEIDNKIKDTLIRIPNLIHDDVPQGASD 138 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ ++ G + H+++ E L + +F+RA K+SGARF LT A LERAL Sbjct: 139 EENVELKKWGTPRDFDFEPKAHWDLVEELNMANFERAAKVSGARFVYLTKDGAQLERALM 198 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + M+GTGQ+PKF +D+F + IPT+EV LTN Sbjct: 199 NYMITKHTTQHGYTEMMVPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 258 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 259 YYRDEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWNA 318 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 319 LEEMTTNAEAILEELKLPYRRVILCTGDIGFSAAKTYDLEVWLPSYNDYKEISSCSNCTD 378 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ ++ + HTLNGSG+AVGR AI+ENY NADGS+TIP L P+M Sbjct: 379 FQARRANIRFKRDHAAKPELAHTLNGSGLAVGRTFAAIVENYQNADGSITIPEALVPFMG 438 Query: 419 NLAVIKK 425 IK Sbjct: 439 GKTEIKP 445 >gi|163868042|ref|YP_001609246.1| seryl-tRNA synthetase [Bartonella tribocorum CIP 105476] gi|189083558|sp|A9IS21|SYS_BART1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|161017693|emb|CAK01251.1| Seryl-tRNA synthetase [Bartonella tribocorum CIP 105476] Length = 425 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 248/423 (58%), Positives = 317/423 (74%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL R LEPQ+E ++ LD R + K++ + RRN+ S +IGQ Sbjct: 1 MLDIKWIRENPEKLDKALVSRGLEPQAERLIQLDFARRSHVAKVQLAQERRNAVSKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A + + + L++E LK L EE ++ SL+K++S +PN+PL++VP G + Sbjct: 61 ALAVSDEKMAERLRSEVEELKVFLSSATAEEKQLTESLEKILSALPNIPLDDVPEGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++IR G P+ +EHF++G+ L M+F+RA++LSG RF+VL+G LA LERALGQ Sbjct: 121 DNVVIRHFGLPPTFNFTPKEHFDLGQDLKQMNFERASRLSGTRFTVLSGALARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+H +EHGYTEVS PLLVRDE +YG Q+PKFA+D+F TTDGRWLI T+EV LTNL Sbjct: 181 FMLDVHVNEHGYTEVSVPLLVRDEIVYGAAQLPKFAEDLFQTTDGRWLISTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI+E LPLRF++L+P FRSEAG+AGRDTRGMLRQHQFWK E+VSIT EE S E E Sbjct: 241 NDEILEVSDLPLRFSSLSPCFRSEAGAAGRDTRGMLRQHQFWKVEMVSITSEEQSLMELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE+ILKRL L +R V L TGD+GF+A KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 301 RMTECAEDILKRLGLPFRTVVLSTGDMGFAARKTYDIEVWLPGQECYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR K L F H+LNGSG AVGRCLIA+LENY ADGS+ +P VL+PYM + Sbjct: 361 GRRMNARYRKEGDKKLHFVHSLNGSGTAVGRCLIAVLENYQQADGSIIVPDVLQPYMGGM 420 Query: 421 AVI 423 I Sbjct: 421 RCI 423 >gi|149003505|ref|ZP_01828379.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|168494543|ref|ZP_02718686.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|237650372|ref|ZP_04524624.1| seryl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237822060|ref|ZP_04597905.1| seryl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|147758441|gb|EDK65440.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|183575522|gb|EDT96050.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] Length = 424 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 275/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSATKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP LRPY+ Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYIG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|71280601|ref|YP_269467.1| seryl-tRNA synthetase [Colwellia psychrerythraea 34H] gi|123632220|sp|Q480Q2|SYS_COLP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|71146341|gb|AAZ26814.1| seryl-tRNA synthetase [Colwellia psychrerythraea 34H] Length = 426 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 190/427 (44%), Positives = 268/427 (62%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + +++ L KR+ +E + +L+E + + K ++++ RN+ S IGQ Sbjct: 1 MLDAKLLRTDLDNIAQQLTKRNFVLDTEALSALEELRKAIQVKTQELQNERNTRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L S L L + E+ EV + + + S IPN+ + VP G + Sbjct: 61 AKARG--EDIAPLLAHVSQLGNDLDAAKTEQDEVLAKIDAIASAIPNLLDDSVPEGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGL-MDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G ++H ++G ++ +DF+ KL+G RF V+ G +A L RA+ Sbjct: 119 DNVEVKRWGTPREFDFEVKDHVDLGFSVDKGLDFESGAKLAGTRFVVMRGKIARLHRAIA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSL 236 QFM+D HT EHGY E+ P LV ++YGTGQ+PKF +D+F T LIPTSEV L Sbjct: 179 QFMLDTHTEEHGYQEMYVPYLVNAASLYGTGQLPKFGEDLFHTDLSNKKFSLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI++ LP++ T P FRSEAGS GRD RG++RQHQF K E+V I + E S Sbjct: 239 TNLVRDEIVDEDDLPIKMTAHTPCFRSEAGSGGRDIRGLIRQHQFDKVEMVQIVKPETSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 T + + AE IL++L+L YR V LC+GD+GFSA KT+DLEVWL Q+ YREISSCS Sbjct: 299 TALDELTRHAEIILEKLELPYRTVQLCSGDVGFSAAKTFDLEVWLPAQDTYREISSCSNM 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G FQ+RRM +R+R+ + + HTLNGSG+AVGR L+AILENY ADGS+ +PTVL+PY Sbjct: 359 GAFQARRMQARFRNNETNKPELLHTLNGSGLAVGRTLVAILENYQQADGSINVPTVLQPY 418 Query: 417 MNNLAVI 423 M L I Sbjct: 419 MGGLTNI 425 >gi|34763854|ref|ZP_00144761.1| Seryl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886373|gb|EAA23641.1| Seryl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 424 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 273/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + + LD K R ++ ++E+++ RN+ SA+I Sbjct: 4 MLELKFMRENVEMLKEMLKNRNSNVDMDTFVELDSKRREILSEVENLKRERNNVSAEIAN 63 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + L + + ++ L+ E E+ +K + IPNV PIG + Sbjct: 64 LKKEKK--DANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHSSTPIGPDED 121 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G + H++IGE LG++DF+R KLSG+RF + G A LERAL Sbjct: 122 YNLEIRKWGVPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAARLERALIN 181 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 182 FMLDVHTLEEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 241 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E Sbjct: 242 RKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDELE 301 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 302 KMVNNAETILQRLELSYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 361 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +YR PN +F HTLNGSG+AVGR L+AI+ENY DGS IP VL PYM + Sbjct: 362 ARRMGLKYRVPNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLIPKVLIPYMGGV 419 Query: 421 AVIKK 425 VIKK Sbjct: 420 DVIKK 424 >gi|315174090|gb|EFU18107.1| seryl-tRNA synthetase [Enterococcus faecalis TX1346] Length = 423 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 203/425 (47%), Positives = 277/425 (65%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ RQN E + LK R ++ + L+LDE+ R L+ K+E+++ RN S +I Sbjct: 1 MLDMKKNRQNVEVVQKKLKTRGVDEEVLLRFLALDEERRALLVKVEELKKHRNQVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + L + EQ+ +L++E + + +PN+P E VP+G Sbjct: 61 QLKRAQKDASQQLL--NMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ +R + + H+EIGEALG++DF+R K+SG+RF G A LERA+ Sbjct: 119 SANVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H +EHGYTEV P LV +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI++++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILDAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + A +IL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +++ HTLNGSG+AVGR + AILENY N DG+VTIP VLRPYM Sbjct: 359 FQARRALIRYRDKTG-HVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMG 417 Query: 419 NLAVI 423 L I Sbjct: 418 GLTKI 422 >gi|255654096|ref|ZP_05399505.1| seryl-tRNA synthetase [Clostridium difficile QCD-23m63] gi|296452479|ref|ZP_06894178.1| serine--tRNA ligase [Clostridium difficile NAP08] gi|296878247|ref|ZP_06902257.1| serine--tRNA ligase [Clostridium difficile NAP07] gi|296258685|gb|EFH05581.1| serine--tRNA ligase [Clostridium difficile NAP08] gi|296430755|gb|EFH16592.1| serine--tRNA ligase [Clostridium difficile NAP07] Length = 423 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 187/426 (43%), Positives = 273/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + + A+++R E + ++ LD K R +++++E ++ N NS I Sbjct: 1 MLDIKRIRENLDDIKKAMERRGEKEFDLDAVVELDNKRREILQEVEVMKNELNVNSKNIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q I EG V K L +++ ++++ EV + ++ + IPNVP EVP G + Sbjct: 61 QLIKEGK--DVTEEKARLKELSDKIKGIDEKVKEVEAKMEYALMRIPNVPHPEVPQGETD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR+ G+ + H++IG LG++DF+RA K++G+RF++ G A LER+L Sbjct: 119 EDNVQIRTWGEPTKFDFEHKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGARLERSLM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 F ++ HT++HGYTEV P + + GTGQ+PKF +DMF + IPT+EV +TN Sbjct: 179 NFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDMFKIEGLEYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++++EI++ LP+++ P FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 IHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDSYNE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE +L+ L L YRVV +CTGDLGF+A YDLEVW+ N Y EISSCS + Sbjct: 299 LESLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFKYDLEVWMPSYNRYVEISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R++ ++ HTLNGSG+A+GRCL AILENY ADGSV +P LRPYM Sbjct: 359 FQARRAGIRFKRDKKSKAEYVHTLNGSGLAIGRCLAAILENYQQADGSVVVPEELRPYM- 417 Query: 419 NLAVIK 424 + VI+ Sbjct: 418 GVDVIR 423 >gi|83593105|ref|YP_426857.1| seryl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] gi|123526569|sp|Q2RTH5|SYS_RHORT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|83576019|gb|ABC22570.1| seryl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] Length = 423 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 219/423 (51%), Positives = 294/423 (69%), Gaps = 2/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ IR+ PE D+AL +R LEP+S +L LD + R + ++ D++ARRN S +IG Sbjct: 1 MHDLKAIRETPEAFDLALARRRLEPRSALVLDLDSQRRAVQTELNDLQARRNEASKRIGL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG AL +E + +K + LE ++ L + +PN+ + VP G + Sbjct: 61 VKKEGG--DAQALVDEVAGIKATMAALEARLGDLDRDLDGHLMGLPNILDDGVPEGPDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G + R+HFEIGE+LG MDF+ A +LSGARF VL G +A LERALGQ Sbjct: 119 ANVEVRRWGTPRAFEFTPRQHFEIGESLGGMDFEAAARLSGARFVVLKGQIARLERALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH +EHGY EV P+LVR A+ GTGQ+PKFA+D+F +LIPT+EV++TNL Sbjct: 179 FMLDLHITEHGYQEVQTPVLVRAPALQGTGQLPKFAEDLFRVEGDFFLIPTAEVTVTNLV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +++ + +LPLR T FRSEAG+AG+DTRGM+RQHQF K E+VSI +DS E E Sbjct: 239 AGQVLAATALPLRMTAFTQCFRSEAGAAGKDTRGMIRQHQFEKVEMVSIVHPDDSAAELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM +CAE++LKRL+L YRV++LC GD+GFSA +TYDLEVWL GQ+ YREISSCS G+FQ Sbjct: 299 RMTACAEDVLKRLELPYRVMALCAGDVGFSARQTYDLEVWLPGQDRYREISSCSNTGDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN R++ K +F HTLNGSGVAVGRCL+A+LENY NADG+V++P LR YM L Sbjct: 359 ARRMNGRFKVEGEKGTRFVHTLNGSGVAVGRCLVAVLENYQNADGTVSVPEALRGYMGGL 418 Query: 421 AVI 423 + Sbjct: 419 ERL 421 >gi|262066815|ref|ZP_06026427.1| serine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] gi|291379481|gb|EFE86999.1| serine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] Length = 421 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 199/425 (46%), Positives = 273/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + ++LD K R ++ ++E ++ RN+ SA+I Sbjct: 1 MLELKFMRENVEMLKEMLKNRNSNIDMDAFVALDTKRREVLSEVEALKRDRNNVSAEIAN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + L + + ++ L+ E E+ +K + IPNV PIG + Sbjct: 61 LKKEKK--DANHLIEKMGGVSSKIKELDAELVEIDEEIKNIQMTIPNVYHPSTPIGPDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N IR G+ + H++IGE LG++DF+R +KLSG+RF + G A LERAL Sbjct: 119 SNKEIRRWGEPKKFDFEPKAHWDIGEDLGILDFERGSKLSGSRFVLYRGAAARLERALIS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D HT EHGYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 179 FMLDTHTLEHGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS GRD +G++R HQF K E+V IT E S+ E E Sbjct: 239 RKEILEQSELPKYYTAYSPCFRREAGSYGRDVKGLIRLHQFNKVEMVKITDAESSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 299 KMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +Y+ N +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM + Sbjct: 359 ARRMGLKYKVTNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGI 416 Query: 421 AVIKK 425 VIKK Sbjct: 417 DVIKK 421 >gi|212703805|ref|ZP_03311933.1| hypothetical protein DESPIG_01853 [Desulfovibrio piger ATCC 29098] gi|212672773|gb|EEB33256.1| hypothetical protein DESPIG_01853 [Desulfovibrio piger ATCC 29098] Length = 425 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 173/428 (40%), Positives = 260/428 (60%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +++ PE L AL R + + L LD + R L+ ++E ++ ++N+ S Q+ Q Sbjct: 1 MIDLKLVQKQPEVLAKALADRQSPLKVDEFLELDGRRRALLAEVESLKQQQNAASRQVAQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + E L ++ L+ + E ++++ + +PN+P VP+G Sbjct: 61 IKREGG--DASHMMEELGALSARIKALDVQTAEAKAAVENWLMGVPNIPDASVPVGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G R+H+E+G A +DF+RAT+L+G+RF++ G A L+RAL Sbjct: 119 ENVEVLRWGTPRQFDFEIRQHWELGGA--ALDFERATRLAGSRFALYMGWAARLDRALVN 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 F +D H Y EV P +V M GTGQ+PKF +D+F +LIPT+EV LTN+ Sbjct: 177 FFLDQHVKHEDYIEVCPPFMVNRATMTGTGQLPKFEEDLFKMPAWDYYLIPTAEVPLTNI 236 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ E+++ LP + P FRSEAG+AG+DTRG++R HQF K E+V +DSF + Sbjct: 237 HAGEVLDEADLPRAYCAATPCFRSEAGAAGKDTRGLIRLHQFTKVEMVRFAHPDDSFNQL 296 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M+ A +L++L+L YRV++LCTGD+GF + KTYDLEVWL QN YREISSCS C +F Sbjct: 297 EIMVGHARTLLEKLELPYRVITLCTGDMGFGSAKTYDLEVWLPAQNTYREISSCSNCIDF 356 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R++ KS + HTLNGSG+ GR + AILEN DGS+ +P L PYM+ Sbjct: 357 QARRADIRFKPKGGKST-YCHTLNGSGLPTGRAMAAILENGQQKDGSIVLPKALVPYMDG 415 Query: 420 LAVIKKEH 427 + VI+ Sbjct: 416 VEVIEPAG 423 >gi|241888885|ref|ZP_04776191.1| seryl-tRNA synthetase [Gemella haemolysans ATCC 10379] gi|241864561|gb|EER68937.1| seryl-tRNA synthetase [Gemella haemolysans ATCC 10379] Length = 426 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 190/428 (44%), Positives = 268/428 (62%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R NPE + L R+LE + ++ LD+K R L+ ++ED++A RN S +I Sbjct: 1 MLDIKLFRANPEMVKEKLAARNLETDVVDLLIDLDKKRRELLVQVEDLKALRNKKSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + +++ + E ++ + + I IPN+ +E PIG Sbjct: 61 ILKR--KREDASDVIADMKHVSDEITTRDIEVKQIAEEINEKIIRIPNLISDETPIGEDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +ENI +R +G+ + H+++ E L + DF+RA K+SG+RF A LERAL Sbjct: 119 DENIEVRRIGQVREFDFEPKAHWDLVEELDIADFERAAKISGSRFVYYKKAGALLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FMID H EHGY E P LV A++GTGQ PKF +D++ LIPT+EV LTN Sbjct: 179 NFMIDTHVVEHGYEEFMVPQLVNRTALFGTGQFPKFVEDVYTVESEGLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI+ LP T + FRSEAGSAGRDTRG++R HQF K E+V + E+S+ + Sbjct: 239 YYNGEILTEDMLPKGVTAFSICFRSEAGSAGRDTRGLIRLHQFNKVEMVRFAKPENSYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE ILK+L+L YRV++LC+GD GFS+ KTYD+EVWL N Y+EISSCS C + Sbjct: 299 LEIMTGHAENILKKLNLPYRVITLCSGDTGFSSAKTYDIEVWLPSYNAYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ ++ ++F HTLNGSG+AVGRCL AI+ENY N DGS+T+P VLRPYM Sbjct: 359 FQARRANMRFKREDTGKVEFLHTLNGSGLAVGRCLAAIIENYQNEDGSITVPEVLRPYMR 418 Query: 419 NLAVIKKE 426 + I+++ Sbjct: 419 GITKIERD 426 >gi|116334281|ref|YP_795808.1| seryl-tRNA synthetase [Lactobacillus brevis ATCC 367] gi|122269037|sp|Q03PU5|SYS_LACBA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116099628|gb|ABJ64777.1| seryl-tRNA synthetase [Lactobacillus brevis ATCC 367] Length = 423 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 188/427 (44%), Positives = 269/427 (62%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQ P+ + L R ++P + +L LD K R LI K E ++A+RN+ S +I Sbjct: 1 MLDLKLIRQEPDFIKEKLATRGVDPADIDALLELDAKRRELIVKSETMKAQRNTVSDEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D E + + ++ + + ++ + +PN+P + VP+G + Sbjct: 61 QLKR--NKEDADDKIKEMRQVSADIKDIDAQLDTLKDQVQDAAAHLPNIPNDNVPVGLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + ++ +R G+KP+ + H+EIGE LG++DF+ K+SG+R+ G A LERA+ Sbjct: 119 DGSVELRQWGEKPNMDFTPKAHYEIGEDLGILDFEAGAKVSGSRYLYYLGAGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 F +D +T + G+ EV P +V D++MYGTGQ PKF +D++ + LIPT+EV L N Sbjct: 179 NFFLDENT-KAGFKEVLPPYIVNDDSMYGTGQFPKFKEDVYQLKDEAMTLIPTAEVPLVN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I + LP+ FT L P+FRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEVIPEEELPVWFTALTPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFCKPENSWAE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE +L++L L Y V++L T D+ F+A T+DLEVW Q YREISSCS + Sbjct: 298 LEALTKHAESLLQKLGLAYHVITLTTSDMSFTAAMTHDLEVWFPEQQTYREISSCSNTTD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR + +YRD N K L++ H LNGSG+AVGR + AILENY NADGSVTIP VL PYM Sbjct: 358 FQARRAHIQYRDENGK-LQYVHALNGSGLAVGRAVAAILENYQNADGSVTIPDVLVPYMG 416 Query: 419 NLAVIKK 425 L I K Sbjct: 417 GLTKITK 423 >gi|210631790|ref|ZP_03297032.1| hypothetical protein COLSTE_00919 [Collinsella stercoris DSM 13279] gi|210159910|gb|EEA90881.1| hypothetical protein COLSTE_00919 [Collinsella stercoris DSM 13279] Length = 430 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 207/429 (48%), Positives = 287/429 (66%), Gaps = 5/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R+NPE LD A+ R E +LDE+ R +I ++E+++A RN+ S +IG Sbjct: 1 MLDIKFVRENPEALDAAMASRQGSWDRERFFALDEERRSVITQVEELQATRNTESKKIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + EG +A K + EQ+ L + E+ + + ++ IPN+P E P+G N Sbjct: 61 LMKEGKREEAEAAKEAVRQVNEQIEGLAERRSELDAEVAGFMARIPNIPCEATPVGKDEN 120 Query: 121 ENILIRSVGKKPSA---IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 EN R VG+ + H+++G G++DFDR KLSGARF+VL+G A L+RA Sbjct: 121 ENPERRRVGEPRDFAAEGFEPKAHWDLGTETGILDFDRGAKLSGARFTVLSGAGATLDRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L F ++ H G+ E P++V E MYGTGQ+PKF DD + T + ++LIPT+EV+LT Sbjct: 181 LQNFFLNTHI-SRGFKEFIPPVIVNREIMYGTGQLPKFEDDAYHTGEDQFLIPTAEVALT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL++ E++++ LPLR+T P FR EAGSAGRDTRG++RQHQF K E+V R E+S Sbjct: 240 NLHAGEVLDAAQLPLRYTAGTPCFREEAGSAGRDTRGIIRQHQFTKVEMVKFARPEESDA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E M++ AE IL++L L YRV+SLCTGDLGFSA +TYD+EVWL N Y+EISSCS CG Sbjct: 300 ELESMVAEAEFILQQLGLPYRVISLCTGDLGFSARQTYDIEVWLPSYNAYKEISSCSNCG 359 Query: 358 NFQSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +YRDP + K +F HTLNGSG+ GR + AI+ENY NADGS+T+P VLRPY Sbjct: 360 DFQARRANIKYRDPENFKGTRFVHTLNGSGLPTGRTMAAIMENYQNADGSITVPEVLRPY 419 Query: 417 MNNLAVIKK 425 M + I+ Sbjct: 420 MGGIEKIEP 428 >gi|304415632|ref|ZP_07396234.1| seryl-tRNA synthetase [Candidatus Regiella insecticola LSR1] gi|304282511|gb|EFL91072.1| seryl-tRNA synthetase [Candidatus Regiella insecticola LSR1] Length = 430 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 195/431 (45%), Positives = 264/431 (61%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R+ + ++ + +++ + L + E+++A+ N+++ IG Sbjct: 1 MLDPNLLRNELDVVAKKLARRNCKLDTDSLRHYEKERKALQIETENLQAQSNAHAKLIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G ++ L +T L E+L + + EV + L + +PN+P + VP G Sbjct: 61 AKAKG--EDIELLCEDTKQLGERLNVARAKLQEVQNKLLYVTLSLPNLPDDSVPEGNCEQ 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +I G ++H +GE G +DF KL+G RF V+ G +A L RAL Q Sbjct: 119 DNKVISHWGDPRKDDCNVQDHVTLGERRGELDFAAGVKLTGTRFVVMKGAIARLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY EV P LV ++ GTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYQEVYVPYLVNSNSLLGTGQLPKFGEDLFHTKPLAEESSSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E SLPL+ T P FRSEAGS GRDTRG++R HQF K ELV ITR Sbjct: 239 EVPLTNLVRGEILEGASLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E + AE++L+ L L YR V LCTGD+G +ACKTYDLEVWL Q YREISS Sbjct: 299 EHSMEALEELTKHAEKVLQLLKLPYRKVLLCTGDMGAAACKTYDLEVWLPAQKKYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +RYRD + + HTLNGSG+AVGR L+A+LEN ADG +TIP V Sbjct: 359 CSNMGDFQARRMEARYRDKQGEKPQLVHTLNGSGLAVGRTLVAVLENNQQADGKITIPEV 418 Query: 413 LRPYMNNLAVI 423 LRPYM L I Sbjct: 419 LRPYMRGLEYI 429 >gi|323443262|gb|EGB00879.1| seryl-tRNA synthetase [Staphylococcus aureus O46] Length = 428 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMIGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|328954851|ref|YP_004372184.1| seryl-tRNA synthetase [Coriobacterium glomerans PW2] gi|328455175|gb|AEB06369.1| seryl-tRNA synthetase [Coriobacterium glomerans PW2] Length = 433 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 198/425 (46%), Positives = 284/425 (66%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+ P+ +D A+ R LD + R LI ++E+++A RN+ S +IG Sbjct: 1 MLDMKFVREMPDEIDAAMAARQTSWDRARFFELDGRRRALICRVEELQATRNAESKKIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +G +A K+ + ++ +L E + L++ ++ +PN+P P+G+ + Sbjct: 61 LMRQGQREQAEAAKDAVRAIGDEAAVLNDELGAIDDELERFMARLPNIPAATTPVGSDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ R P+ R H+E+G LG++DFDR +KLSGARF+VL G A L+RAL Sbjct: 121 DNVECRRWSTPPAFAFDPRPHWELGVDLGILDFDRGSKLSGARFTVLAGAGAALDRALQS 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 F ++ H HG+TE P++V E MYGTGQ+PKF +D + D ++LIPT+EV+LTNL+ Sbjct: 181 FFLNTHI-AHGFTEFIPPVIVNREIMYGTGQLPKFEEDAYHVGDDQFLIPTAEVALTNLH 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + E+++ SLPLR+T P FR EAGSAGRDTRG++RQH+F K E+V R E+S E E Sbjct: 240 AGEVLDGASLPLRYTAGTPCFREEAGSAGRDTRGIIRQHEFTKVEMVKFARPEESDDELE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 M + AE +L++L+L YRV+SLCTGDLGFSA +TYD+EVWL N Y+EISSCS CG+FQ Sbjct: 300 SMTAEAELLLQQLELPYRVISLCTGDLGFSARQTYDIEVWLPSYNAYKEISSCSNCGDFQ 359 Query: 361 SRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 +RR + RYRDP K +F HTLNGSG+ GR + AI+ENY N DGS+T+P VLRPYM Sbjct: 360 ARRASIRYRDPERFKGTRFVHTLNGSGLPTGRTMAAIMENYQNEDGSITVPEVLRPYMGG 419 Query: 420 LAVIK 424 L I+ Sbjct: 420 LERIE 424 >gi|294083982|ref|YP_003550739.1| Serine--tRNA ligase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663554|gb|ADE38655.1| Serine--tRNA ligase [Candidatus Puniceispirillum marinum IMCC1322] Length = 428 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 216/428 (50%), Positives = 281/428 (65%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI++IR++P+ D A+K+R ++ + IL +D R L +++D+++RRN S +IG+ Sbjct: 1 MHDIRFIREHPDQFDAAMKRRKVDMSASSILEIDSARRALQSELQDMQSRRNIASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G DAL E + +K LP +E E ++ L ++ IPN+ VP G + Sbjct: 61 LKANGG--DADALIAEVNDIKTALPDIETREADLAHKLDSVLMEIPNILDVSVPDGDDEH 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N LI S G PS +H +GE LG MDF KL+GARF VL G LA LERAL Sbjct: 119 DNELIHSYGDIPSFSFTPIDHVALGEGLGQMDFALGAKLAGARFVVLQGQLARLERALAA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 M+D HTSE GY E P LV + M GTGQ+PKFA+D++ T D WLIPT+EV LTN+ Sbjct: 179 LMLDTHTSEFGYIETVPPSLVNSQTMTGTGQLPKFAEDLYKTDDK-WLIPTAEVPLTNIV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I+ LP+R T FRSEAGSAGRDTRGM+RQHQF K E+VSI+ +DS E E Sbjct: 238 AGDILTPDILPIRMTAYTNCFRSEAGSAGRDTRGMIRQHQFSKVEMVSISHPDDSAAELE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ----NLYREISSCSTC 356 RM CAE IL++L+L YRV+ LC+GD GFSA +TYDLEVWL GQ +YREISSCS C Sbjct: 298 RMTGCAEAILQKLELPYRVLKLCSGDTGFSAEQTYDLEVWLPGQDEGRGMYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G FQ+RRM +RYRD ++ +F HTLNGSG+AVGR +IAILEN DG+V +P L PY Sbjct: 358 GPFQARRMKARYRDKDTGETQFLHTLNGSGLAVGRTMIAILENGQQEDGTVCLPAALHPY 417 Query: 417 MNNLAVIK 424 M +IK Sbjct: 418 MGTDRLIK 425 >gi|49475354|ref|YP_033395.1| seryl-tRNA synthetase [Bartonella henselae str. Houston-1] gi|67461759|sp|Q6G419|SYS_BARHE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|49238160|emb|CAF27369.1| Seryl-tRNA synthetase [Bartonella henselae str. Houston-1] Length = 425 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 243/424 (57%), Positives = 313/424 (73%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR++PE LD AL KR +EPQ+E ++ LD + R + K++ + RRN+ S +IGQ Sbjct: 1 MLDIKWIREHPEKLDEALAKRGIEPQAERLIKLDLERRSHVAKVQSAQERRNTASKKIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A + + + + E +K L EE + SL+ +S +PN+PL++VP G + Sbjct: 61 ALAVCDQKMAERFRAEVEEIKVFLSSATAEEKRLTESLENALSALPNIPLDDVPEGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+++R + +EHF++G+ L MDF+RA++LSG RF+VL+G LA LERALGQ Sbjct: 121 DNVVLRHFSVPTTFDFTPKEHFDLGQNLKQMDFERASRLSGTRFTVLSGALARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+H EHGYTEVS PLLVRDE++YG Q+PKFADD+F TTDGRWLI T+EV LTNL Sbjct: 181 FMLDVHVYEHGYTEVSVPLLVRDESVYGAAQLPKFADDLFRTTDGRWLISTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++EI+E LPLRF++L P FRSEAGSAGRDTRGMLRQHQFWK E+VSIT E S E E Sbjct: 241 NNEILEISDLPLRFSSLTPCFRSEAGSAGRDTRGMLRQHQFWKVEMVSITTAEQSLIELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE++LKRLDL +R + L TGD+GF+A KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 301 RMTECAEDVLKRLDLPFRTMVLSTGDMGFAARKTYDIEVWLPGQGCYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR K+L F H+LNGSG AVGRCLIA+LENY ADGS+ IP VL+PYM + Sbjct: 361 GRRMNARYRKEGEKTLHFVHSLNGSGTAVGRCLIAVLENYQQADGSIIIPDVLQPYMRGM 420 Query: 421 AVIK 424 I Sbjct: 421 RCIT 424 >gi|55736407|gb|AAV60049.1| seryl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|55738291|gb|AAV61932.1| seryl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] Length = 446 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 270/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + L L R + + + LD K R L+ K E+++A+RN S I Sbjct: 22 MLDVKRIRNDFDALSEKLATRGVVAETLNELKELDVKRRELLIKSEELKAQRNIASDDIA 81 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + ++ ++ E + L +I +PN P + VPIG Sbjct: 82 QAKR--NKEDASEQIAAMQKVSAEIKEIDAELAAIDEKLNTIIMTLPNTPNDSVPIGADE 139 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 140 DENVEVRRWGTPRDFDFEVKAHWDLGEDLGILDWERGAKVTGSRFLFYKGLGARLERAIY 199 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTE+ P +V ++M+GTGQ PKF +D F ++ IPT+EV LTN Sbjct: 200 NFMLDEHAKE-GYTEMITPYMVNHDSMFGTGQYPKFKEDTFELDGTDYVLIPTAEVPLTN 258 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V ++ EDS+ E Sbjct: 259 YYRGEILDGKELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPEDSYDE 318 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 319 LEKMVVNAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 378 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 379 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 438 Query: 419 NLAVIKKE 426 VI + Sbjct: 439 GAEVISPK 446 >gi|331004983|ref|ZP_08328393.1| Seryl-tRNA synthetase [gamma proteobacterium IMCC1989] gi|330421225|gb|EGG95481.1| Seryl-tRNA synthetase [gamma proteobacterium IMCC1989] Length = 437 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 193/440 (43%), Positives = 283/440 (64%), Gaps = 19/440 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R +P + AL+KR + I +LD++ +++ K E ++ RNS S IG+ Sbjct: 1 MLDPKLLRSDPAGVAKALEKRGFILDVDAIKALDDQRKVIQIKTEALQQERNSKSKNIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E LK QL ++E + L+ ++ +PN+P++EVP G + Sbjct: 61 AKASG--EDIAPLLKEVENLKSQLNSADEELKSLQDQLETILIAVPNMPVDEVPEGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALG-------------LMDFDRATKLSGARFSVL 167 +N+ +R G + ++H ++G L +DFD +K++G+RF+V+ Sbjct: 119 DNVEVRRWGTPRTFDFEVKDHVDLGAQLNLSSSNGNGASLGSALDFDAGSKITGSRFAVM 178 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DG 225 G +A L RAL QFMID+H++EHGY EV P LV ++++GTGQ+PKF +D+F T Sbjct: 179 RGGVARLHRALIQFMIDVHSNEHGYQEVHVPFLVNRDSLFGTGQLPKFEEDLFKTNDERE 238 Query: 226 RWLIPTSEVSLTNLYSHEI-IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 +LIPT+EV +TNL E+ + LP++ + P FRSEAGS GRDTRGM+RQHQF K Sbjct: 239 LYLIPTAEVPITNLLRDELLQDDTQLPIKIVSHTPCFRSEAGSHGRDTRGMIRQHQFEKV 298 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E+V+ + +S E + +CAE IL++L+L YR V LC GD+GFS+ KTYD+EVW+ Q Sbjct: 299 EMVNFVKPSESMQALEDLTACAEAILEKLELPYRTVILCGGDIGFSSAKTYDIEVWVPSQ 358 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 + YREISSCS+ G+FQ+RRM +R+R+P + + HTLNGSG+A+GR L+AI+ENY AD Sbjct: 359 DKYREISSCSSFGDFQARRMKARFRNPETGKTELLHTLNGSGLAIGRTLLAIMENYQQAD 418 Query: 405 GSVTIPTVLRPYMNNLAVIK 424 GSVT+PTVLR YM VI+ Sbjct: 419 GSVTVPTVLRSYM-GTDVIR 437 >gi|145635512|ref|ZP_01791212.1| seryl-tRNA synthetase [Haemophilus influenzae PittAA] gi|145267277|gb|EDK07281.1| seryl-tRNA synthetase [Haemophilus influenzae PittAA] Length = 429 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 191/431 (44%), Positives = 261/431 (60%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + + + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMDDMDNQLTEAKAQLDAILAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNL II+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + Sbjct: 239 PVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS Sbjct: 299 SMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RRM +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P LR Sbjct: 359 NMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELR 418 Query: 415 PYMNNLAVIKK 425 PYM L VI K Sbjct: 419 PYMGRLDVIGK 429 >gi|21911052|ref|NP_665320.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28895262|ref|NP_801612.1| seryl-tRNA synthetase [Streptococcus pyogenes SSI-1] gi|30173169|sp|Q8K635|SYS_STRP3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|21905261|gb|AAM80123.1| putative seryl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28810508|dbj|BAC63445.1| putative seryl-tRNA synthetase [Streptococcus pyogenes SSI-1] Length = 425 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 268/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + ++ LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDTVAAKLKNRGVSEDTLTHLKELDEKRRTLLVQSEELKAGRNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + + + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDATQQIADMQKVSADIKTIDNQLVAIDQQVADIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV+SLCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|91977257|ref|YP_569916.1| seryl-tRNA synthetase [Rhodopseudomonas palustris BisB5] gi|123735378|sp|Q136H4|SYS_RHOPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|91683713|gb|ABE40015.1| seryl-tRNA synthetase [Rhodopseudomonas palustris BisB5] Length = 434 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 235/432 (54%), Positives = 297/432 (68%), Gaps = 10/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP D A +R L P ++ ++ LDE RI I E +ARRN+ S +IG+ Sbjct: 1 MHDIKAIRDNPTAFDAAYTRRGLSPIADSLIKLDETRRIAILASEQAQARRNAASKEIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + + L E + LK +P LE + +LK +S IPN+PL +VP G + Sbjct: 61 AKKAKDNARAEVLMAEVAELKTTMPALEAAVKDADEALKTALSEIPNLPLADVPEGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ G K S + H ++GEALG+MDF+ A KLSGARF VL LA LERA+GQ Sbjct: 121 GNVERHHFGAKRSYTFTPKAHDDLGEALGMMDFEAAAKLSGARFVVLKNGLARLERAIGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------TDGRWLIPTSEV 234 F +D+HT EHGYTEV+ PLLV+D+AM+GT Q+PKF DD F +G WLIPT+EV Sbjct: 181 FFLDVHTGEHGYTEVNPPLLVKDDAMFGTAQLPKFRDDQFAAGAIGSGGEGYWLIPTAEV 240 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 SLTNL I++ K LP+R T L P FR+EAG+AGRDTRGM+RQHQF K ELVSIT E Sbjct: 241 SLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEK 300 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREIS 351 S EHERMLSCAEE+L+RL LHYRV++LCTGD+GF++ KTYD+EVW+ GQ YREIS Sbjct: 301 SKDEHERMLSCAEEVLRRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREIS 360 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS CG+FQ+RRM++R R P+ K +F HTLNGSG AVGR LIA++ENY DGS+ +P Sbjct: 361 SCSVCGDFQARRMDARSRGPDGK-PRFVHTLNGSGTAVGRALIAVIENYQQEDGSIAVPD 419 Query: 412 VLRPYMNNLAVI 423 VL PYM L VI Sbjct: 420 VLLPYMGGLKVI 431 >gi|293376411|ref|ZP_06622645.1| serine--tRNA ligase [Turicibacter sanguinis PC909] gi|325839304|ref|ZP_08166770.1| serine--tRNA ligase [Turicibacter sp. HGF1] gi|292644967|gb|EFF63043.1| serine--tRNA ligase [Turicibacter sanguinis PC909] gi|325490586|gb|EGC92901.1| serine--tRNA ligase [Turicibacter sp. HGF1] Length = 424 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 189/426 (44%), Positives = 274/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R++ + L+ R + I LDEK + +I ++E ++++RN S IG Sbjct: 1 MLDLKLVREDLQGTIKRLETRGGDFSYLNKIAELDEKRKEIILEVEQLKSKRNETSKLIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q E V L ++ + E + L+++ + +K ++ PNVP + +G Sbjct: 61 QYKREKK--DVTELLSQMDGVGETVKQLDEQLRVIDEEIKNILLGTPNVPCGTIAVGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ IR G+ + H+++ L ++DF+RA K++G+RF+V G A LERAL Sbjct: 119 NDNVEIRKYGEPTKFDFEPKAHWDLVTDLDIIDFERAGKITGSRFAVYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+DLHT +HGYTE+ P++V +M GTGQ+PKF DD F +LIPT+EV +TN Sbjct: 179 SFMLDLHTGDHGYTEILPPVIVNRASMTGTGQLPKFEDDAFKLVDSDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ + LP+++T +P FR+EAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 LHRDEILSADQLPIKYTAYSPCFRAEAGSAGRDTRGIIRQHQFNKVELVKFVKPEDSYQE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE++L+ L L YRV+ LCTGD+GFSA KTYD+EVWL N Y+EISSCS + Sbjct: 299 LESLTANAEKVLQLLGLPYRVIELCTGDIGFSAAKTYDIEVWLPSYNAYKEISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N ++R +F HTLNGSG+A+GR + AI+ENY ADG++ IP VLRPYM Sbjct: 359 FQARRANIKFRRDAKAKPEFVHTLNGSGLAIGRTVAAIIENYQQADGTIVIPEVLRPYMR 418 Query: 419 NLAVIK 424 N VIK Sbjct: 419 NAEVIK 424 >gi|300114577|ref|YP_003761152.1| seryl-tRNA synthetase [Nitrosococcus watsonii C-113] gi|299540514|gb|ADJ28831.1| seryl-tRNA synthetase [Nitrosococcus watsonii C-113] Length = 427 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 192/426 (45%), Positives = 272/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R L +R + +L+ + + + + ++++A+RN S IG+ Sbjct: 1 MLDPKLLRNALADTSRQLARRGFAWDAAAFATLEAERKEMQVRTQELQAQRNVRSKAIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L E + L + L E V + +++++ IPN+P P G Sbjct: 61 AKAQG--EDIAPLLAEMTELGDHLKTAEARLEVVQAQIEEILLGIPNLPDASTPPGKDEQ 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G P+ + ++H ++G +LG MDF+ A KLSG RF L G LA L RAL Q Sbjct: 119 DNVEVRRWGTPPALAFVPKDHVDLGASLG-MDFETAVKLSGTRFVTLIGPLAQLHRALIQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTNL 239 FM+D+HT EHGYTEV P L E++ GTGQ+PKF +D+F +LIPT+EV +TNL Sbjct: 178 FMLDVHTREHGYTEVYVPYLANRESLVGTGQLPKFEEDLFAIQGTGYYLIPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 EI+ ++ LPL++ P FRSEAGS G+DTRGM+RQHQF K ELV I E S H Sbjct: 238 ARGEILPAERLPLKYVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQIVPPEVSRQAH 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AE IL+RL+L YRV++LC GDLGF++ KTYDLEVWL GQ YREISSCS +F Sbjct: 298 EDLTGHAEVILQRLELPYRVMNLCAGDLGFASSKTYDLEVWLPGQQAYREISSCSNFLDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+ +R+RDP ++ + HTLNGSG+AVGR L+A++ENY ADGS+ +P L+PYM Sbjct: 358 QARRIQARWRDPKTQRPAWVHTLNGSGLAVGRTLLAVMENYQQADGSIRVPEALQPYMGG 417 Query: 420 LAVIKK 425 +AV++ Sbjct: 418 VAVLQP 423 >gi|29377733|ref|NP_816887.1| seryl-tRNA synthetase [Enterococcus faecalis V583] gi|227555642|ref|ZP_03985689.1| seryl-tRNA synthetase [Enterococcus faecalis HH22] gi|229547172|ref|ZP_04435897.1| seryl-tRNA synthetase [Enterococcus faecalis TX1322] gi|229550742|ref|ZP_04439467.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255971509|ref|ZP_05422095.1| seryl-tRNA synthetase [Enterococcus faecalis T1] gi|255974459|ref|ZP_05425045.1| seryl-tRNA synthetase [Enterococcus faecalis T2] gi|256618568|ref|ZP_05475414.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256761814|ref|ZP_05502394.1| seryl-tRNA synthetase [Enterococcus faecalis T3] gi|256854941|ref|ZP_05560302.1| seryl-tRNA synthetase [Enterococcus faecalis T8] gi|256957056|ref|ZP_05561227.1| seryl-tRNA synthetase [Enterococcus faecalis DS5] gi|256960920|ref|ZP_05565091.1| seryl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256963942|ref|ZP_05568113.1| seryl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|257078733|ref|ZP_05573094.1| seryl-tRNA synthetase [Enterococcus faecalis JH1] gi|257083965|ref|ZP_05578326.1| seryl-tRNA synthetase [Enterococcus faecalis Fly1] gi|257087795|ref|ZP_05582156.1| seryl-tRNA synthetase [Enterococcus faecalis D6] gi|257088440|ref|ZP_05582801.1| seryl-tRNA synthetase [Enterococcus faecalis CH188] gi|257418881|ref|ZP_05595875.1| seryl-tRNA synthetase [Enterococcus faecalis T11] gi|257421304|ref|ZP_05598294.1| seryl-tRNA synthetase [Enterococcus faecalis X98] gi|293384815|ref|ZP_06630660.1| serine--tRNA ligase [Enterococcus faecalis R712] gi|293388237|ref|ZP_06632756.1| serine--tRNA ligase [Enterococcus faecalis S613] gi|294781208|ref|ZP_06746555.1| serine--tRNA ligase [Enterococcus faecalis PC1.1] gi|300861572|ref|ZP_07107656.1| serine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|307268871|ref|ZP_07550236.1| seryl-tRNA synthetase [Enterococcus faecalis TX4248] gi|307273946|ref|ZP_07555156.1| seryl-tRNA synthetase [Enterococcus faecalis TX0855] gi|307277353|ref|ZP_07558451.1| seryl-tRNA synthetase [Enterococcus faecalis TX2134] gi|307283995|ref|ZP_07564165.1| seryl-tRNA synthetase [Enterococcus faecalis TX0860] gi|307286509|ref|ZP_07566608.1| seryl-tRNA synthetase [Enterococcus faecalis TX0109] gi|307289982|ref|ZP_07569908.1| seryl-tRNA synthetase [Enterococcus faecalis TX0411] gi|312901342|ref|ZP_07760623.1| seryl-tRNA synthetase [Enterococcus faecalis TX0470] gi|312902989|ref|ZP_07762178.1| seryl-tRNA synthetase [Enterococcus faecalis TX0635] gi|312908857|ref|ZP_07767796.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312952975|ref|ZP_07771831.1| seryl-tRNA synthetase [Enterococcus faecalis TX0102] gi|312979500|ref|ZP_07791182.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|46577436|sp|Q82YY9|SYS2_ENTFA RecName: Full=Seryl-tRNA synthetase 2; AltName: Full=Serine--tRNA ligase 2; Short=SerRS 2; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase 2 gi|29345201|gb|AAO82957.1| seryl-tRNA synthetase [Enterococcus faecalis V583] gi|227175219|gb|EEI56191.1| seryl-tRNA synthetase [Enterococcus faecalis HH22] gi|229304175|gb|EEN70171.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|229307754|gb|EEN73741.1| seryl-tRNA synthetase [Enterococcus faecalis TX1322] gi|255962527|gb|EET95003.1| seryl-tRNA synthetase [Enterococcus faecalis T1] gi|255967331|gb|EET97953.1| seryl-tRNA synthetase [Enterococcus faecalis T2] gi|256598095|gb|EEU17271.1| seryl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256683065|gb|EEU22760.1| seryl-tRNA synthetase [Enterococcus faecalis T3] gi|256709454|gb|EEU24501.1| seryl-tRNA synthetase [Enterococcus faecalis T8] gi|256947552|gb|EEU64184.1| seryl-tRNA synthetase [Enterococcus faecalis DS5] gi|256951416|gb|EEU68048.1| seryl-tRNA synthetase [Enterococcus faecalis Merz96] gi|256954438|gb|EEU71070.1| seryl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256986763|gb|EEU74065.1| seryl-tRNA synthetase [Enterococcus faecalis JH1] gi|256991995|gb|EEU79297.1| seryl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256995825|gb|EEU83127.1| seryl-tRNA synthetase [Enterococcus faecalis D6] gi|256997252|gb|EEU83772.1| seryl-tRNA synthetase [Enterococcus faecalis CH188] gi|257160709|gb|EEU90669.1| seryl-tRNA synthetase [Enterococcus faecalis T11] gi|257163128|gb|EEU93088.1| seryl-tRNA synthetase [Enterococcus faecalis X98] gi|291077897|gb|EFE15261.1| serine--tRNA ligase [Enterococcus faecalis R712] gi|291082384|gb|EFE19347.1| serine--tRNA ligase [Enterococcus faecalis S613] gi|294451671|gb|EFG20126.1| serine--tRNA ligase [Enterococcus faecalis PC1.1] gi|295112309|emb|CBL30946.1| seryl-tRNA synthetase [Enterococcus sp. 7L76] gi|300849033|gb|EFK76786.1| serine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|306498976|gb|EFM68468.1| seryl-tRNA synthetase [Enterococcus faecalis TX0411] gi|306502382|gb|EFM71659.1| seryl-tRNA synthetase [Enterococcus faecalis TX0109] gi|306503366|gb|EFM72615.1| seryl-tRNA synthetase [Enterococcus faecalis TX0860] gi|306505987|gb|EFM75159.1| seryl-tRNA synthetase [Enterococcus faecalis TX2134] gi|306509254|gb|EFM78314.1| seryl-tRNA synthetase [Enterococcus faecalis TX0855] gi|306514787|gb|EFM83337.1| seryl-tRNA synthetase [Enterococcus faecalis TX4248] gi|310625295|gb|EFQ08578.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|310629116|gb|EFQ12399.1| seryl-tRNA synthetase [Enterococcus faecalis TX0102] gi|310633657|gb|EFQ16940.1| seryl-tRNA synthetase [Enterococcus faecalis TX0635] gi|311287682|gb|EFQ66238.1| seryl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|311291575|gb|EFQ70131.1| seryl-tRNA synthetase [Enterococcus faecalis TX0470] gi|315026612|gb|EFT38544.1| seryl-tRNA synthetase [Enterococcus faecalis TX2137] gi|315030106|gb|EFT42038.1| seryl-tRNA synthetase [Enterococcus faecalis TX4000] gi|315033599|gb|EFT45531.1| seryl-tRNA synthetase [Enterococcus faecalis TX0017] gi|315036264|gb|EFT48196.1| seryl-tRNA synthetase [Enterococcus faecalis TX0027] gi|315143579|gb|EFT87595.1| seryl-tRNA synthetase [Enterococcus faecalis TX2141] gi|315148283|gb|EFT92299.1| seryl-tRNA synthetase [Enterococcus faecalis TX4244] gi|315151248|gb|EFT95264.1| seryl-tRNA synthetase [Enterococcus faecalis TX0012] gi|315153733|gb|EFT97749.1| seryl-tRNA synthetase [Enterococcus faecalis TX0031] gi|315155041|gb|EFT99057.1| seryl-tRNA synthetase [Enterococcus faecalis TX0043] gi|315158670|gb|EFU02687.1| seryl-tRNA synthetase [Enterococcus faecalis TX0312] gi|315163393|gb|EFU07410.1| seryl-tRNA synthetase [Enterococcus faecalis TX0645] gi|315165668|gb|EFU09685.1| seryl-tRNA synthetase [Enterococcus faecalis TX1302] gi|315168475|gb|EFU12492.1| seryl-tRNA synthetase [Enterococcus faecalis TX1341] gi|315172092|gb|EFU16109.1| seryl-tRNA synthetase [Enterococcus faecalis TX1342] gi|315174225|gb|EFU18242.1| seryl-tRNA synthetase [Enterococcus faecalis TX1346] gi|315576187|gb|EFU88378.1| seryl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315579766|gb|EFU91957.1| seryl-tRNA synthetase [Enterococcus faecalis TX0630] gi|315582998|gb|EFU95189.1| seryl-tRNA synthetase [Enterococcus faecalis TX0309A] gi|323479199|gb|ADX78638.1| seryl-tRNA synthetase [Enterococcus faecalis 62] gi|327536390|gb|AEA95224.1| serine--tRNA ligase [Enterococcus faecalis OG1RF] gi|329577273|gb|EGG58736.1| serine--tRNA ligase [Enterococcus faecalis TX1467] Length = 423 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 208/426 (48%), Positives = 282/426 (66%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQN + + L+ R ++ + L LDE R L+ K+E+++ RN SA+I Sbjct: 1 MLDVKMMRQNFDEVKAKLQTRGVKEEILVEFLRLDESRRDLLVKVEEMKKYRNDVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N A E + + L+ E + + L+ + + +PN+P + VP+G Sbjct: 61 QLKR--NKEDATAKIAEMKEVGGNIKALDAEINAIDEELRGITTTLPNLPDDSVPVGAGE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R + + + H+E+ E LG++DF+R K++G+RF G A LERAL Sbjct: 119 EENVEVRRWSEPRTFAFEPKPHWEVAENLGILDFERGAKVAGSRFVYYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FM+DLH EHGYTE+ P +V D AM+GTGQ PKF +D+F D LIPT+EV LTN Sbjct: 179 NFMLDLHVYEHGYTEMITPYIVNDTAMFGTGQFPKFKEDVFQLQDTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI++ K LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILDGKDLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AEEIL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAEEILQKLGLPYRVMALSTGDMGFSAAKTYDLEVWIPAQETYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD N K +++ HTLNGSG+AVGR + AILENY N DGSVT+P VL PYM Sbjct: 359 FQARRAMIRYRDENDK-VQYAHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEVLVPYMG 417 Query: 419 NLAVIK 424 NL VIK Sbjct: 418 NLTVIK 423 >gi|238928176|ref|ZP_04659936.1| serine--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238884136|gb|EEQ47774.1| serine--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 423 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 188/425 (44%), Positives = 274/425 (64%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R+N + LK R L+E R +++ +E+ +ARRN+ S ++G Sbjct: 1 MLDMKFVRENLPAVQEMLKHRCNTLDLSPFTELEEHRRRILQDVEEKKARRNAVSKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G D + E TL +++ L+++ +V L++L+ +PN+P +VPIG Sbjct: 61 RRKAG--ENADEIIAEMRTLGDEIAALDEDLRDVELRLRELLLQVPNMPKADVPIGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN +R G + + H++IG+ALG++D +RA K++GARF+ G A LERA Sbjct: 119 ENPEVRRCGTPRTFDFTPKAHWDIGDALGILDAERAAKVTGARFTFYKGLGARLERACIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLH +HGYTE+ AP +V + +M GTGQ+PKFA+DMF +L+PT+EV TN Sbjct: 179 FMMDLHAEKHGYTEMLAPYIVNEASMIGTGQLPKFAEDMFKLEGLDYYLVPTAEVPTTNY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++++ LP +T+ FR+EAGSAGRDTRG++RQHQF K EL+ E S+ E Sbjct: 239 HRDEILDAEQLPEYYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVTPETSWDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M++ AE++LK L+L YRV+ LCTGD+ F++ KTYD+EVW+ Q+ YREISSCS C ++ Sbjct: 299 ESMVAAAEDVLKILELPYRVIQLCTGDMSFTSAKTYDIEVWMPAQDKYREISSCSNCTDY 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N +YR F HTLNGSG+AVGR + AILEN DGSV +P L PYMN Sbjct: 359 QARRANIKYRPARGAKPVFLHTLNGSGLAVGRTVAAILENNQQEDGSVIVPKALVPYMNG 418 Query: 420 LAVIK 424 + VI+ Sbjct: 419 VTVIR 423 >gi|209520411|ref|ZP_03269173.1| seryl-tRNA synthetase [Burkholderia sp. H160] gi|209499148|gb|EDZ99241.1| seryl-tRNA synthetase [Burkholderia sp. H160] Length = 431 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 192/431 (44%), Positives = 272/431 (63%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI +R++ + + L R +L+ + R + E+++ARRNS S QIG Sbjct: 1 MLDIHLLRKDLDGVAKRLADRGYTLDVAAFTALEAERRDTQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + ++ L L+ +PN+ E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKASAVKLEDIQKRLSDLLLDVPNLAHESVPVGNDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H ++G LG +DF+ KLSGARF++L G +A L RAL Q Sbjct: 119 DNVEVRRWGTPRQFDFEVKDHVDVGTPLG-LDFETGAKLSGARFTMLRGQIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FMID HT +HGYTE+ P +V + +YGTGQ+PKFADDMF ++LI TSE Sbjct: 178 FMIDTHTLQHGYTEIYTPYIVNPDILYGTGQLPKFADDMFRVEKGGGENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+E+ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V + + Sbjct: 238 ISLTNTVRESIVEADALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPD 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVWL QN YREISSC Sbjct: 298 ASYDALEQMVGHAEVILQKLELPYRVITLCTGDMGFSAAKTYDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LEN+ NADGSVT+P + Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRTLVAVLENFQNADGSVTVPAAV 416 Query: 414 RPYMNNLAVIK 424 RPY+ + ++ Sbjct: 417 RPYLGGVERLE 427 >gi|21242403|ref|NP_641985.1| seryl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|30173178|sp|Q8PLY2|SYS_XANAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|21107843|gb|AAM36521.1| seryl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 426 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 210/427 (49%), Positives = 279/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ+P L L+ R + + SL+ + + + + ++++++RNS S IG Sbjct: 1 MLDPALLRQHPADLAERLRSTRGFSLDTAELESLESERKRIQVRTQELQSQRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V AL E + ++L E + + L+ + +PN+P E VP+G Sbjct: 61 QAKAKG--EDVAALMAEVAGFGDELKASEDALDAIRAKLEGIALGLPNLPAEGVPLGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ G ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 SENLEQSRWGTPRQFDFAVKDHVELGAPHGWLDGETAAKLSGARFTVLRGPVARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 QFM+DLH EHGY E + PLLV ++M GTGQ+PKF DD+F T R+LIPTSEV L Sbjct: 179 QFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQTEVGESRRYLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EI++++ LPLR T + FR+EAGS GRDTRGM+RQHQF K ELV+ EDS Sbjct: 239 TNIVREEIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACAPEDSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L++L L YR V LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 AEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQNTYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P S + HTLNGSG AVGR +IA++ENY NADGS+ +P VLRPY Sbjct: 359 GDFQARRMQARWRNPVSGKPELLHTLNGSGTAVGRAMIAVMENYQNADGSIDVPQVLRPY 418 Query: 417 MNNLAVI 423 M + I Sbjct: 419 MGGIERI 425 >gi|319787313|ref|YP_004146788.1| seryl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317465825|gb|ADV27557.1| seryl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 425 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 208/426 (48%), Positives = 274/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R L +R ++ + SL+ + + + + ++++ RN+ S IGQ Sbjct: 1 MLDPSLLRSQIAATAERLARRGYALDTQALESLEAERKAIQVRTQELQNLRNTRSKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V AL E + ++L E E+ L + IPN+P ++VP+G Sbjct: 61 AKAKG--EDVSALLAEVAGFGDELKASEARLEEIRGRLDAITQGIPNLPADDVPVGADEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ G S +R+H E+G G +D D A KLSGARF+VL G LA L RAL Q Sbjct: 119 GNVEQHRHGTPRSFEFEARDHVELGARNGWLDADTAAKLSGARFTVLRGQLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLT 237 FM+DLHT EHGY E + P++V +++ GTGQ+PKF +D+F T R+LIPTSEV LT Sbjct: 179 FMLDLHTGEHGYEETNVPVIVNADSLRGTGQLPKFEEDLFSTELGEHRRYLIPTSEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+ I++ LPLR T + FRSEAGS GRD RGM+RQHQF K ELVSITR E+S Sbjct: 239 NIVRDGILDGDKLPLRMTAHSMCFRSEAGSGGRDVRGMIRQHQFEKVELVSITRPEESDA 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EHERM CAE +L++L L YR + LCTGD+GFSA KTYDLEVWL Q+ YREISSCS CG Sbjct: 299 EHERMTRCAEVVLEKLGLPYRRMLLCTGDMGFSARKTYDLEVWLPSQHTYREISSCSNCG 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RRM +R+R+P + + HTLNGSGVAVGR LIA++ENY NADGS+ +P VL+PYM Sbjct: 359 DFQARRMQARWRNPATGKPELVHTLNGSGVAVGRALIAVMENYQNADGSIDVPEVLQPYM 418 Query: 418 NNLAVI 423 I Sbjct: 419 GGATRI 424 >gi|255102013|ref|ZP_05330990.1| seryl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255307881|ref|ZP_05352052.1| seryl-tRNA synthetase [Clostridium difficile ATCC 43255] Length = 423 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 184/426 (43%), Positives = 279/426 (65%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + + A+++R + + ++ LD++ R +++++E ++ N+ S I Sbjct: 1 MLDIKRIRENLDCIKKAMERRGEKDFNLDEVVKLDDERRKILQEVEVMKNELNTASKNIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 I EG + +K L +++ ++++ EV ++ L+ IPNVP EVP G + Sbjct: 61 NLIKEGKDVENEKIK--LKELSDKIKVIDQNLKEVEDKMEYLLMRIPNVPHPEVPQGETD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R+ GK + S+ H+EIG LG++DF+ A+K++G+RF++ G A LERAL Sbjct: 119 EDNVEVRTWGKTTTFDFESKAHWEIGTELGILDFETASKITGSRFTLYKGLGARLERALL 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLI-PTSEVSLTN 238 F +D +T +GYTEV P + + GTGQ+PKF +DMF + + PTSEV LTN Sbjct: 179 NFYLDTNTKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGMDYFMIPTSEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++++EI++ + LP+ +T P FRSEAGSAGRDTRG++RQHQF K E+V I E+S+ E Sbjct: 239 IHANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKIVAPEESYNE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRVV +CTGDLGF+A YD+EVW+ N Y EISSCS C + Sbjct: 299 LEKLTNNAETMLQLLNLPYRVVKICTGDLGFTASFKYDVEVWMPSYNRYVEISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R++ ++ HTLNGSG+A+GR + AILENY DGSV +P VLRPYM Sbjct: 359 FQARRAGIRFKRDKDSKAEYVHTLNGSGLAIGRSVAAILENYQQEDGSVVVPEVLRPYM- 417 Query: 419 NLAVIK 424 ++VIK Sbjct: 418 GVSVIK 423 >gi|149198613|ref|ZP_01875657.1| seryl-tRNA synthetase [Lentisphaera araneosa HTCC2155] gi|149138328|gb|EDM26737.1| seryl-tRNA synthetase [Lentisphaera araneosa HTCC2155] Length = 425 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 175/428 (40%), Positives = 262/428 (61%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DI+ R++ + R LE IL+ D + R K+E+++++RN+ S QIG Sbjct: 1 MIDIKKFREDADFFKKKWADRGLEVDVNEILAWDTEWRESTVKVEELKSQRNTASKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + +L +Q+ L+ + E+ S + + +PN P E P+G + Sbjct: 61 MKKNG--EDASSAMEAVRSLGDQIKELDAKAAELSSQVNAKLLSLPNPPSEFTPVGLTEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G KP + H+++G+ L ++D RA K+SG+ F + G A LERAL Sbjct: 119 DNPEVRRWGTKPEFDFAPQAHWDLGQNLDILDLPRAAKISGSGFYLWKGAGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 F +D +T E+GY E P +V +AM GTGQ+PKFA++++ D +L+PT+EV +TN+ Sbjct: 179 FFLDQNT-ENGYKEAWVPFVVNPKAMTGTGQLPKFAEEIYHAPEDNLYLVPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI+++K LP+ +T P FR EAG+AG+D+RG+LR HQF K E+V S+TE Sbjct: 238 HADEILDAKELPIAYTAYTPCFRREAGAAGKDSRGILRVHQFSKVEMVKFVEPSTSYTEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E +L+ AE +L++L LHYRV+ LC+GDLGFSA + YD+EVW G Y E+SSCS +F Sbjct: 298 EMLLADAEHLLQQLGLHYRVIELCSGDLGFSAARCYDIEVWAPGTERYLEVSSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 QSRR RY++ K K HTLNGSG+A+ RC++A++E Y ADGS+ +P VL PYM Sbjct: 358 QSRRCKIRYKEETEKKAKLLHTLNGSGLALPRCIVALMETYQRADGSIEVPDVLVPYMGG 417 Query: 420 LAVIKKEH 427 L I E Sbjct: 418 LTEISAEG 425 >gi|139473237|ref|YP_001127952.1| seryl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|166223299|sp|A2RCY1|SYS_STRPG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|134271483|emb|CAM29704.1| seryl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] Length = 425 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 195/428 (45%), Positives = 268/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + ++ LDEK R L+ + E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDTVAAKLKNRGVSEDTLTHLKELDEKRRTLLVQSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + ++ + + + +I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDATQQIADMQKVSADIKTIDNQLVAIDQQVADIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 EDNVEIRRWGTPRDFDFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHIKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKSEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV+SLCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLGLPYRVISLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GETVISPK 425 >gi|294625158|ref|ZP_06703801.1| seryl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600530|gb|EFF44624.1| seryl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 426 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 211/427 (49%), Positives = 280/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ+P L L+ R + + SL+ + + + + ++++++RNS S IG Sbjct: 1 MLDPALLRQHPADLAERLRSTRGFSLDTAELESLESERKRIQVRTQELQSQRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V AL E + ++L E + + L+ + +PN+P E+VP+G Sbjct: 61 QAKAKG--EDVAALMAEVAGFGDELKASEDALDAIRAKLEGIALGLPNLPAEDVPLGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ G ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 SENLEQSRWGTPRQFDFSVKDHVELGAPHGWLDGETAAKLSGARFTVLRGPVARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 QFM+DLH EHGY E + PLLV ++M GTGQ+PKF DD+F T R+LIPTSEV L Sbjct: 179 QFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQTDVGESRRYLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EII+++ LPLR T + FR+EAGS GRDTRGM+RQHQF K ELV+ EDS Sbjct: 239 TNIVREEIIDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACAPEDSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L++L L YR V LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 AEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQNTYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P S + HTLNGSG AVGR +IA++ENY NADGS+ +P VLRPY Sbjct: 359 GDFQARRMQARWRNPVSGKPELLHTLNGSGTAVGRAMIAVMENYQNADGSIDVPQVLRPY 418 Query: 417 MNNLAVI 423 M + I Sbjct: 419 MGGIERI 425 >gi|94263583|ref|ZP_01287393.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|93456003|gb|EAT06154.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] Length = 427 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 195/420 (46%), Positives = 268/420 (63%), Gaps = 2/420 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML++++IR+N + +R+L+ + LD + R L+ ++E+ R R S +IG Sbjct: 1 MLELRFIRENFALVREKTARRNLDTTALDQFPELDRRRRELLTELEEGRNHRKKVSQEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 EG+ + ET L E+L LE++ V L++++ IPN+ + VP G Sbjct: 61 ALKKEGDEAAASRRMEETRQLGERLKELEEQLAVVDGQLEEIVMAIPNLCEDSVPAGGDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ R G P ++ H+E+GEA G +DF RA KL+G+RF++LTG A LERAL Sbjct: 121 ADNVEYRRWGAPPEFDFPAKAHWELGEADGSLDFTRAAKLAGSRFALLTGFAARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+DLHT +HGYTEV P LV +M TGQ+PKFA+D+F WLIPT+EV +TN Sbjct: 181 SFMLDLHTEKHGYTEVLPPFLVNSASMTATGQLPKFAEDLFRIEGADLWLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ E + K LP+ + P FRSEAGS GRDT+G++RQHQF K ELV T E S E Sbjct: 241 IHRDETLAEKELPIYYCAYTPCFRSEAGSYGRDTKGLIRQHQFDKVELVKFTTPETSDAE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++LS AE++L+ L+L +RVV+LC+GDLGFSA KTYD+EVW+ QN YREISSCS G+ Sbjct: 301 LEKLLSDAEKVLQLLELPHRVVTLCSGDLGFSARKTYDIEVWMPAQNCYREISSCSNFGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR + HTLNGSG+AVGR L AI EN+ ADG++ PT L PY+ Sbjct: 361 FQARRGGIRYRPAGQQKSALVHTLNGSGLAVGRTLAAIYENHQQADGTIKPPTALAPYLG 420 >gi|294664247|ref|ZP_06729621.1| seryl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605989|gb|EFF49266.1| seryl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 426 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 211/427 (49%), Positives = 280/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ+P L L+ R + + SL+ + + + + ++++++RNS S IG Sbjct: 1 MLDPALLRQHPADLAERLRSTRGFSLDTAELESLESERKRIQVRTQELQSQRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V AL E + ++L E + + L+ + +PN+P E+VP+G Sbjct: 61 QAKAKG--EDVAALMAEVAGFGDELKASEDALDAIRAKLEGIALGLPNLPAEDVPLGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ G ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 SENLEQSRWGTPRQFDFAVKDHVELGAPHGWLDGETAAKLSGARFTVLRGPVARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 QFM+DLH EHGY E + PLLV ++M GTGQ+PKF DD+F T R+LIPTSEV L Sbjct: 179 QFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQTDVGESRRYLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EII+++ LPLR T + FR+EAGS GRDTRGM+RQHQF K ELV+ EDS Sbjct: 239 TNIVREEIIDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACAPEDSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L++L L YR V LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 AEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQNTYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P S + HTLNGSG AVGR +IA++ENY NADGS+ +P VLRPY Sbjct: 359 GDFQARRMQARWRNPVSGKPELLHTLNGSGTAVGRAMIAVMENYQNADGSIDVPQVLRPY 418 Query: 417 MNNLAVI 423 M + I Sbjct: 419 MGGIERI 425 >gi|116627246|ref|YP_819865.1| seryl-tRNA synthetase [Streptococcus thermophilus LMD-9] gi|122268151|sp|Q03MA3|SYS_STRTD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116100523|gb|ABJ65669.1| seryl-tRNA synthetase [Streptococcus thermophilus LMD-9] Length = 425 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 271/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + L L R + + + LD K R L+ K E+++A+RN S I Sbjct: 1 MLDVKRIRNDFDALSEKLATRGVVAETLNELKELDVKRRELLIKSEELKAQRNIASDDIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + ++ ++ E + L +I +PN+P + VP+G Sbjct: 61 QAKR--NKEDASEQIAAMQKVSAEIKEIDAELAAIDEKLNTIIVTLPNIPNDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPRDFDFEVKAHWDLGEDLGILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTE+ P +V ++M+GTGQ PKF +D F ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEMITPYMVNHDSMFGTGQYPKFKEDTFELDGTDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V ++ EDS+ E Sbjct: 238 YYRGEILDGKELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPEDSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVVNAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVILPK 425 >gi|313672443|ref|YP_004050554.1| seryl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312939199|gb|ADR18391.1| seryl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 421 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 275/425 (64%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++ N +++ +R+ E E I+ LD K R LI+K+E+++ RN S Q+G Sbjct: 1 MLDLKFVVNNIDYVKQKTLQRNYEFDFEKIVELDLKRRGLIQKVEELKKYRNEVSKQVGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + + ++ ++ +++ L+KE EV L ++ IPN+ + VPIG N Sbjct: 61 FKKEGK--DISEISSKMRSISDEIDNLDKELSEVQQQLNDVMLMIPNIIDDSVPIGNDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N ++ G+K + H+EI E L ++DF+R KLS +RFS+ G + LERAL Sbjct: 119 DNPEVKKWGEKRVFDFTPKSHWEIAEKLDIVDFERGAKLSKSRFSIYKGLGSRLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 FM+D H GYTE+ PLLV +AM GTGQ+PKF +++F C D +LIPT+EV +TN+ Sbjct: 179 FMLDTHI-AKGYTEIIPPLLVNAKAMTGTGQLPKFEEELFKCERDELYLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ EII+ LPL F + P FR EAGS G+D RG++RQHQF K ELV I E S E Sbjct: 238 YADEIIDYDKLPLNFVSYTPCFRREAGSYGKDVRGLIRQHQFNKVELVKIVEPERSMEEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + A EIL+ L L YR++ LC+GDLGFS+ TYD+EVWL GQN YREISSCS +F Sbjct: 298 EILTDNAAEILRLLGLPYRIIKLCSGDLGFSSSITYDIEVWLPGQNCYREISSCSNFKDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 QSRR RYRD N K++ F HTLNGSG+AVGR +AILENY DGSV +P VL+PYM Sbjct: 358 QSRRAKIRYRDRN-KNVVFPHTLNGSGLAVGRTFLAILENYQQEDGSVVVPDVLKPYMGG 416 Query: 420 LAVIK 424 + +IK Sbjct: 417 VDIIK 421 >gi|329732416|gb|EGG68766.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 428 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALIPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|323439689|gb|EGA97407.1| seryl-tRNA synthetase [Staphylococcus aureus O11] Length = 428 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 267/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKNSQLNEIDNKMIGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|15673694|ref|NP_267868.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281492294|ref|YP_003354274.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|30173210|sp|Q9CEX2|SYS_LACLA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|12724729|gb|AAK05810.1|AE006401_11 seryl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281375958|gb|ADA65449.1| Seryl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|326407178|gb|ADZ64249.1| seryl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 423 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 203/427 (47%), Positives = 277/427 (64%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R +E + E + LD K R LI K E ++A RNS S +I Sbjct: 1 MLDIKKIRADFDGVAAKLATRGVEKEKLEKLHDLDIKRRELIVKSEALKAERNSVSDEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + + ++ ++ E E+ +L ++I +PN+P E PIG Sbjct: 61 QVKRAKGDASAQ--IAAMQKVSAEIKAIDAELAEIEENLNEIIIMLPNLPHESTPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R VG+ P+ + H+++GE LG++D++R K++G+RF G A LERAL Sbjct: 119 DDNVEVRRVGQTPTFNFEPKAHWDLGEDLGILDWERGGKVTGSRFLFYKGAGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL--IPTSEVSLT 237 FM+D H + GYTE+ P +V E+M+GTGQ PKF +D F D R IPT+EV LT Sbjct: 179 NFMLDEH-GKEGYTEMITPYMVNQESMFGTGQYPKFKEDTFELKDDRGFVLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y EI++ LP++FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + + S+ Sbjct: 238 NYYRGEILDGAELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPDQSYD 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+M + AE IL++L L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS C Sbjct: 298 ELEKMTANAENILQKLGLAYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RYRD K ++ HTLNGSG+AVGR + AILENY N DGS+T+P VLRPYM Sbjct: 358 DFQARRAQIRYRDEEGK-VQLLHTLNGSGLAVGRTVAAILENYQNEDGSITVPEVLRPYM 416 Query: 418 NNLAVIK 424 L VIK Sbjct: 417 GGLEVIK 423 >gi|300767807|ref|ZP_07077717.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494792|gb|EFK29950.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 425 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 193/429 (44%), Positives = 273/429 (63%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQNP+ + L R + + +L+ DEK R LI K E +++ RN S +I Sbjct: 1 MLDVKMIRQNPDFVKEQLGHRGVAASDIDDLLAADEKRRELIAKSEQLKSTRNQVSGEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + + E + + L++E V + ++ + + +PN+P +VP+ Sbjct: 61 QKKRNKEDASAE--IAEMQKVSADVKTLDEERRTVDAQVQDMAAHLPNMPHPDVPVSLKE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + +R +G + H++IGE LG++DF+R K+SG+RF G A LERA+ Sbjct: 119 EDAVELRRIGTPRHFDFTPKAHWDIGEDLGILDFERGAKVSGSRFLYYVGDGAKLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 F +D H GYTEV P +V DE+MYGTGQ PKF +D F TT LIPT+EV L N Sbjct: 179 NFFLDQH-EAEGYTEVLPPYMVTDESMYGTGQFPKFKEDAFQITTQDLTLIPTAEVPLVN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I ++ LP+ FT L+P+FR EAGSAGRDT+G++R HQF K E+V T+ EDS+ E Sbjct: 238 YYRDEVIPAEKLPVYFTALSPAFREEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSWDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +LK+L L Y V++L TGD+ F+A T+DLEVW Q+ YREISSCS C + Sbjct: 298 LEKLTNNAESLLKKLGLPYHVITLTTGDMSFTAAMTHDLEVWFPEQDKYREISSCSNCTD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR + +YRD + K L+F HTLNGSG+AVGR + AILENY N DG+VTIP VL PYM+ Sbjct: 358 FQARRAHIQYRDDDGK-LQFVHTLNGSGLAVGRTVAAILENYQNEDGTVTIPDVLVPYMH 416 Query: 419 NLAVIKKEH 427 I+K+ Sbjct: 417 GKTKIEKQG 425 >gi|238855568|ref|ZP_04645871.1| serine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260665157|ref|ZP_05866007.1| seryl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|282932346|ref|ZP_06337781.1| serine--tRNA ligase [Lactobacillus jensenii 208-1] gi|238831852|gb|EEQ24186.1| serine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260561211|gb|EEX27185.1| seryl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|281303567|gb|EFA95734.1| serine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 435 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 191/438 (43%), Positives = 268/438 (61%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+ + L R ++P+ + ++++DEK R + + E ++A+RN S +I Sbjct: 1 MLDIKVIRERLDWAKEKLATRGIKPEELDEVVAIDEKRRAKLSETEALKAKRNEVSKEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + EQ+ L++E E+ ++ +PN P + PIG Sbjct: 61 AKKR--NKENADDAIKAMREVGEQIKKLDEEVAELTEKQNYILLRLPNFPDDSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+++G+ L ++DFD A K+SGARF G A LERA+ Sbjct: 119 SYNQEVRKWNEPTKFNFEPKAHWDLGDDLHILDFDTAAKVSGARFVYYKGAGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------RWLIPT 231 F +D +T E GYTEV P LV D++M GTGQ PKF +D++ D LIPT Sbjct: 179 NFFLDENTKE-GYTEVIPPYLVNDDSMQGTGQFPKFTEDVYTIVDNDDPDKPLNLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +I++ K LP+ T L P+FRSEAGSAGRDTRG++R HQF K E+V + + Sbjct: 238 AEVPLVNYFRGDIVDGKKLPINVTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKVCK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E+S+ E +R+ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ QN YREIS Sbjct: 298 PEESWNELDRLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQNKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K +K HTLNGSG+AVGR + AILENY N DGSVT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-VKLVHTLNGSGLAVGRTVAAILENYQNEDGSVTVPE 416 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYM+ + I KE L Sbjct: 417 VLVPYMHGMTKITKEDTL 434 >gi|329116627|ref|ZP_08245344.1| serine--tRNA ligase [Streptococcus parauberis NCFD 2020] gi|326907032|gb|EGE53946.1| serine--tRNA ligase [Streptococcus parauberis NCFD 2020] Length = 425 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 275/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R ++ + LDEK R L+ K E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDQVAQKLKVRGVKEDVLANLKELDEKRRHLLIKSEELKAERNVASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + + ++ E E+ + ++I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDTNQQIKDMQKVSADIKAIDTELAEIDEKVTEIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G P ++ H+EIGE L ++D++R K++GARF A LERA+ Sbjct: 119 DENVEVRRWGTPPEFGFEAKPHWEIGENLDILDWERGAKVTGARFLFYKNLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYQEIITPYMVNHDSMFGTGQYPKFKEDTFELKDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+E K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILEGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYD+EVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVITLCTGDMGFSAAKTYDIEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVIAPK 425 >gi|28377821|ref|NP_784713.1| seryl-tRNA synthetase [Lactobacillus plantarum WCFS1] gi|308179999|ref|YP_003924127.1| seryl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258537|sp|Q88XZ7|SYS2_LACPL RecName: Full=Seryl-tRNA synthetase 2; AltName: Full=Serine--tRNA ligase 2; Short=SerRS 2; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase 2 gi|28270654|emb|CAD63560.1| serine--tRNA ligase [Lactobacillus plantarum WCFS1] gi|308045490|gb|ADN98033.1| seryl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 425 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 193/429 (44%), Positives = 273/429 (63%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQNP+ + L R + + +L+ DEK R LI K E +++ RN S +I Sbjct: 1 MLDVKMIRQNPDFVKEQLGHRGVAASDIDDLLAADEKRRELIAKSEQLKSTRNQVSGEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + + E + + L++E V + ++ + + +PN+P +VP+ Sbjct: 61 QKKRNKEDASAE--IAEMQKVSADVKTLDEERRTVDAQVQDMAAHLPNMPHPDVPVSLKE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + +R +G + H++IGE LG++DF+R K+SG+RF G A LERA+ Sbjct: 119 EDAVELRRIGTPRHFDFTPKAHWDIGEDLGILDFERGAKVSGSRFLYYVGDGAKLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 F +D H GYTEV P +V DE+MYGTGQ PKF +D F TT LIPT+EV L N Sbjct: 179 NFFLDQH-EAEGYTEVLPPYMVTDESMYGTGQFPKFKEDAFRITTQDLTLIPTAEVPLVN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I ++ LP+ FT L+P+FR EAGSAGRDT+G++R HQF K E+V T+ EDS+ E Sbjct: 238 YYRDEVIPAEKLPVYFTALSPAFREEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSWDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +LK+L L Y V++L TGD+ F+A T+DLEVW Q+ YREISSCS C + Sbjct: 298 LEKLTNNAESLLKKLGLPYHVITLTTGDMSFTAAMTHDLEVWFPEQDKYREISSCSNCTD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR + +YRD + K L+F HTLNGSG+AVGR + AILENY N DG+VTIP VL PYM+ Sbjct: 358 FQARRAHIQYRDDDGK-LQFVHTLNGSGLAVGRTVAAILENYQNEDGTVTIPDVLVPYMH 416 Query: 419 NLAVIKKEH 427 I+K+ Sbjct: 417 GKTKIEKQG 425 >gi|222153600|ref|YP_002562777.1| seryl-tRNA synthetase [Streptococcus uberis 0140J] gi|254783494|sp|B9DVD8|SYS_STRU0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|222114413|emb|CAR43194.1| seryl-tRNA synthetase [Streptococcus uberis 0140J] Length = 425 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 197/428 (46%), Positives = 271/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + E + L R + ++ LDEK R L+ E+++A RN +SA I Sbjct: 1 MLDLKRIRTDFETVAQKLATRGVSEDSLNHLKELDEKRRQLLVSSEELKAERNLSSAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N E + + ++ E E+ + ++I+ +PN P + VP+G Sbjct: 61 QAKR--NKEDASQQIAEMQKMSADIKAIDAELAEIDEKVTEIITVLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 119 DDNVEIRRWGTPREFDFEIKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELKDSNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKDLPINFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 +I + Sbjct: 418 GAEMISPK 425 >gi|257866231|ref|ZP_05645884.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257873255|ref|ZP_05652908.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257800189|gb|EEV29217.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257807419|gb|EEV36241.1| seryl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 425 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 276/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQN + L R ++ + + L+LDE+ R L+ + E+ + RN S +I Sbjct: 1 MLDVKMIRQNFAEVQSKLATRGVQKEVLDRFLTLDERRRELLVQTEERKKLRNDVSGEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + Q+ L++E ++ +K++ + +PN+P + VP+G Sbjct: 61 ALKRA--KEDAADKIAQMKEVGSQIKQLDEEIAQIDEDIKQIATTLPNLPNDSVPVGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR + + + H+EI E LG++DF+R K+SG+RF G A LERAL Sbjct: 119 DDNVEIRRWAEPKAFAFEPKPHWEIAEELGILDFERGAKVSGSRFVYYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHVYEHGYTEMITPYIVNSQAMFGTGQFPKFKEDVFQLADTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+E + LP FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + + S+ E Sbjct: 239 YYQGEILEQEQLPAYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDADHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+IL++L+L YRV+SLCTGD+GFSA KTYDLEVW+ Q +YREISSCS C + Sbjct: 299 LEKMTANAEDILQKLNLPYRVLSLCTGDMGFSAAKTYDLEVWIPAQEMYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD K + + HTLNGSG+AVGR + A+LENY N DGSVT+P VL PYM Sbjct: 359 FQARRAMIRYRDQEGK-IHYMHTLNGSGLAVGRTVAAVLENYQNEDGSVTVPEVLVPYMG 417 Query: 419 NLAVIKK 425 L I+K Sbjct: 418 GLTKIEK 424 >gi|312277730|gb|ADQ62387.1| Seryl-tRNA synthetase [Streptococcus thermophilus ND03] Length = 425 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 269/428 (62%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + L L R + + + LD K R L+ K E+++A+RN S I Sbjct: 1 MLDVKRIRNEFDALSEKLATRGVVAETLNELKELDVKRRELLIKSEELKAQRNIASDDIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + ++ ++ E + L +I +PN P + VP+G Sbjct: 61 QAKR--NKEDASEQIAAMQKVSAEIKEIDAELAAIDEKLNTIIVTLPNTPNDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPRDFDFEVKAHWDLGEDLGILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTE+ P +V ++M+GTGQ PKF +D F ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEMITPYMVNHDSMFGTGQYPKFKEDTFELDGTDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V ++ EDS+ E Sbjct: 238 YYRGEILDGKELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPEDSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMVVNAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 VI + Sbjct: 418 GAEVISPK 425 >gi|119385156|ref|YP_916212.1| seryl-tRNA synthetase [Paracoccus denitrificans PD1222] gi|166222757|sp|A1B4S2|SYS_PARDP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|119374923|gb|ABL70516.1| seryl-tRNA synthetase [Paracoccus denitrificans PD1222] Length = 430 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 213/429 (49%), Positives = 273/429 (63%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL R+L P S ILSLD R I E +A +N S + G Sbjct: 1 MHDIRAIRENPAAFDAALALRNLPPVSPEILSLDADRRSRIAAAEAAQAEQNKASKEAGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ + L+ + K++ L+ E + + L++L+ +PN+PL+ VP G + Sbjct: 61 AKGRGDEAEFQRLRALVTAKKDETARLQAEATALDAKLRELLLAVPNLPLDGVPPGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ + REHFEI MDF+ A KLSG+RF VL G +A + RAL Q Sbjct: 121 DNVEIRRWGEPRAFDFAPREHFEIEGVRPGMDFETAAKLSGSRFVVLKGGVARVHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT EHG E AP+LV E M GTGQ+PKF +D + T +G WLIPTSEV+LTN Sbjct: 181 FMLDLHTEEHGLAETWAPVLVLSEMMEGTGQLPKFGEDSYQTREGWWLIPTSEVTLTNTV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + ++++ SLP R + FRSEAGSAGRDT GMLRQHQF K E+VSIT E EH Sbjct: 241 NGDLVDHASLPRRMVAHSQCFRSEAGSAGRDTSGMLRQHQFEKVEMVSITDAESGVEEHA 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +L+RL L YR + LC GD+GF A T+DLEVWL GQ YREISS S CG+FQ Sbjct: 301 RMTRCAEAVLERLGLPYRTIVLCGGDMGFGARITHDLEVWLPGQGKYREISSVSYCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR +F HTLNGSG+AVGR LIA+LEN ADGSV +P VL PY+ Sbjct: 361 ARRMNARYRPAGGGKPEFVHTLNGSGLAVGRTLIAVLENGQQADGSVKLPEVLHPYLGGR 420 Query: 421 AVIKKEHIL 429 + + +L Sbjct: 421 TRLGADGVL 429 >gi|332970285|gb|EGK09277.1| serine--tRNA ligase [Kingella kingae ATCC 23330] Length = 471 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 200/431 (46%), Positives = 283/431 (65%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+Q R + + L L R E + L+ + L K E+ +A+RN+ S QIG Sbjct: 40 MLDVQHFRNDIQTLAARLVTRGFELDTAKFEQLEAARKSLQMKNEEWQAKRNALSKQIGA 99 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +G +A K E + K ++ +E+E ++ + L L+ +PN+P E VP+G + Sbjct: 100 LMGQGKKDEAEAAKTEVAACKAEMDKIEQELPQIQADLDDLLLRVPNLPHESVPVGKDES 159 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG + ++H ++G ALG +DF++A +LSGARFS++ G +A L RAL Q Sbjct: 160 ENVEVRKVGTPRTFDFEIKDHVDLGAALG-LDFEKAAELSGARFSLMKGKIARLHRALAQ 218 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKF +D+F T ++LIPT+E Sbjct: 219 FMLDTHTQQHGYTECYTPYIVSDSTLLGTGQLPKFGEDLFHVTRGGDESKLTQYLIPTAE 278 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN EI+ LP++ T +P FRSEAGS G+DTRG++RQHQF K E+V I + E Sbjct: 279 VTLTNTVRDEILSLNDLPMKLTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVEMVQIVQPE 338 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M++ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 339 KSYEALEEMVTHAENILKLLELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSC 398 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+ IP L Sbjct: 399 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRALVAVLENHQNADGSINIPMAL 457 Query: 414 RPYMNNLAVIK 424 RPY+ L ++ Sbjct: 458 RPYLGGLERLE 468 >gi|254556005|ref|YP_003062422.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|254044932|gb|ACT61725.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1] Length = 425 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 193/429 (44%), Positives = 273/429 (63%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQNP+ + L R + + +L+ DEK R LI K E +++ RN S +I Sbjct: 1 MLDVKMIRQNPDFVKEQLGHRGVAASDIDGLLAADEKRRELIAKSEQLKSTRNQVSGEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + + E + + L++E V + ++ + + +PN+P +VP+ Sbjct: 61 QKKRNKEDASAE--IAEMQKVSADVKTLDEERRTVDAQVQDMAAHLPNMPHPDVPVSLKE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + +R +G + H++IGE LG++DF+R K+SG+RF G A LERA+ Sbjct: 119 EDAVELRRIGTPRHFDFTPKAHWDIGEDLGILDFERGAKVSGSRFLYYVGDGAKLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 F +D H GYTEV P +V DE+MYGTGQ PKF +D F TT LIPT+EV L N Sbjct: 179 NFFLDQH-EAEGYTEVLPPYMVTDESMYGTGQFPKFKEDAFRITTQDLTLIPTAEVPLVN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I ++ LP+ FT L+P+FR EAGSAGRDT+G++R HQF K E+V T+ EDS+ E Sbjct: 238 YYRDEVIPAEKLPVYFTALSPAFREEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSWDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +LK+L L Y V++L TGD+ F+A T+DLEVW Q+ YREISSCS C + Sbjct: 298 LEKLTNNAESLLKKLGLPYHVITLTTGDMSFTAAMTHDLEVWFPEQDKYREISSCSNCTD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR + +YRD + K L+F HTLNGSG+AVGR + AILENY N DG+VTIP VL PYM+ Sbjct: 358 FQARRAHIQYRDDDGK-LQFVHTLNGSGLAVGRTVAAILENYQNEDGTVTIPDVLVPYMH 416 Query: 419 NLAVIKKEH 427 I+K+ Sbjct: 417 GKTKIEKQG 425 >gi|153952683|ref|YP_001393448.1| seryl-tRNA synthetase [Clostridium kluyveri DSM 555] gi|219853356|ref|YP_002470478.1| hypothetical protein CKR_0013 [Clostridium kluyveri NBRC 12016] gi|189083564|sp|A5N469|SYS_CLOK5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783019|sp|B9DXT9|SYS_CLOK1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|146345564|gb|EDK32100.1| SerS [Clostridium kluyveri DSM 555] gi|219567080|dbj|BAH05064.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 426 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 174/428 (40%), Positives = 266/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR NPE + L R + + + ++SLDEK R ++ ++E ++ +RN +S + Sbjct: 1 MLDLKRIRNNPEEIKKQLLNRGEDFELSIIDKVVSLDEKRRKILVEVEALKNKRNQDSGE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G + L E + + + + + E+ ++ ++ IPN+P VP G Sbjct: 61 IAKIKRAGGNADT--LVVEMKQVSDNIKQYDIQLSEINDKIEYIMLRIPNIPNPAVPEGK 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N+ IR + + H++IG L ++DF+R K++G+RF+ G A LERA Sbjct: 119 LDEDNVEIRRWMEPTKFKFQPKAHWDIGTNLNILDFERGGKVAGSRFTFYRGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSL 236 + + +D HT +HGY E+ P +V +M GTGQ+PKF +D F + +LIPT+EV + Sbjct: 179 IVSYYLDFHTEKHGYEEILPPYMVNRTSMIGTGQLPKFEEDAFRVANNDFFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN Y +E+++ + LP+++ + FR+EAGSAGRDTRG++RQHQF K ELV + E S+ Sbjct: 239 TNFYRNEVLKGEDLPIKYVAYSACFRAEAGSAGRDTRGIIRQHQFNKVELVKFAKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE+++K L + YRVV +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 DELEKLTNDAEDVIKGLKIPYRVVKICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR+N +Y++ K+ HTLNGSGVA+GR + AILENY DGSV IP +L+PY Sbjct: 359 EDFQARRVNIKYKETPKDKPKYIHTLNGSGVAIGRTVAAILENYQQDDGSVLIPEILKPY 418 Query: 417 MNNLAVIK 424 M VIK Sbjct: 419 MGGREVIK 426 >gi|294781766|ref|ZP_06747099.1| serine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] gi|294481876|gb|EFG29644.1| serine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] Length = 421 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 199/425 (46%), Positives = 273/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+++++R+N E L LK R+ + ++LD K R ++ ++E ++ RN+ SA+I Sbjct: 1 MLELKFMRENVEMLKEMLKNRNSNIDMDAFVALDTKRREVLSEVEALKRDRNNVSAEIAN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + L + + ++ L+ E E+ +K + IPNV PIG + Sbjct: 61 LKKEKK--DANHLIEKMGGVSSKIKELDAELVEIDEEIKNIQMTIPNVYHSSTPIGPDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N IR G+ + H++IGE LG++DF+R +KLSG+RF + G A LERAL Sbjct: 119 SNKEIRRWGEPRKFDFEPKAHWDIGEGLGILDFERGSKLSGSRFVLYRGAAARLERALIS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D HT EHGYTE P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ Sbjct: 179 FMLDTHTLEHGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+E LP +T +P FR EAGS GRD +G++R HQF K E+V IT E S+ E E Sbjct: 239 RKEILEQSELPKYYTAYSPCFRREAGSYGRDVKGLIRLHQFNKVEMVKITDAESSYDELE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +M++ AE IL+RL+L YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ Sbjct: 299 KMVNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +Y+ N +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM + Sbjct: 359 ARRMGLKYKVTNGS--EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGI 416 Query: 421 AVIKK 425 VIKK Sbjct: 417 DVIKK 421 >gi|254976443|ref|ZP_05272915.1| seryl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255093828|ref|ZP_05323306.1| seryl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255315579|ref|ZP_05357162.1| seryl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255518239|ref|ZP_05385915.1| seryl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255651358|ref|ZP_05398260.1| seryl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|260684417|ref|YP_003215702.1| seryl-tRNA synthetase [Clostridium difficile CD196] gi|260688076|ref|YP_003219210.1| seryl-tRNA synthetase [Clostridium difficile R20291] gi|306521188|ref|ZP_07407535.1| seryl-tRNA synthetase [Clostridium difficile QCD-32g58] gi|260210580|emb|CBA65152.1| seryl-tRNA synthetase [Clostridium difficile CD196] gi|260214093|emb|CBE06284.1| seryl-tRNA synthetase [Clostridium difficile R20291] Length = 423 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 185/426 (43%), Positives = 281/426 (65%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + + A+++R + + ++ LD++ R +++++E ++ + N+ S I Sbjct: 1 MLDIKRIRENLDCIKKAMERRGEKDFNLDEVVKLDDERRKILQEVEVMKHKLNTASKNIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 I EG + +K L +++ ++++ EV ++ L+ IPNVP EVP G + Sbjct: 61 NLIKEGKDVENEKIK--LKELSDKIKVIDQNLKEVEDKMEYLLMRIPNVPHPEVPQGETD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R+ GK + S+ H+EIG LG++DF+ A+K++G+RF++ G A LERAL Sbjct: 119 EDNVEVRTWGKTTTFDFESKAHWEIGTELGILDFETASKITGSRFTLYKGLGARLERALL 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 F +D +T +GYTEV P + + GTGQ+PKF +DMF ++IPTSEV LTN Sbjct: 179 NFYLDTNTKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGLDYFMIPTSEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++++EI++ + LP+ +T P FRSEAGSAGRDTRG++RQHQF K E+V I E+S+ E Sbjct: 239 IHANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKIVAPEESYNE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRVV +CTGDLGF+A YD+EVW+ N Y EISSCS C + Sbjct: 299 LEKLTNNAETMLQLLNLPYRVVKICTGDLGFTASFKYDVEVWMPSYNRYVEISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R++ ++ HTLNGSG+A+GR + AILENY DGSV +P VLRPYM Sbjct: 359 FQARRAGIRFKRDKDSKAEYVHTLNGSGLAIGRSVAAILENYQQEDGSVVVPEVLRPYM- 417 Query: 419 NLAVIK 424 ++VIK Sbjct: 418 GVSVIK 423 >gi|320161762|ref|YP_004174987.1| seryl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319995616|dbj|BAJ64387.1| seryl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 424 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 171/428 (39%), Positives = 267/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI R+ P+ + AL+ R ++ + ++ LD++ R + ++E ++A RN+ S +IG Sbjct: 1 MLDINLFRETPDVVREALRHRQMDDSVVDRVIELDQQRRANLTRVEALKAERNAVSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + A + +++ L++ ++ L+ ++ IPN+PL E+P+G S Sbjct: 61 KTK---DPAERQAKIEAMRQVGDEITALDEAVRKIEEELESTLAQIPNLPLPEIPVGESE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N +I++VG + H+E+G LG++DF+R K++G+RF VL+G A L+RAL Sbjct: 118 HQNQVIKTVGTPKTFDFTPLPHWELGPKLGILDFERGVKITGSRFYVLSGAGARLQRALI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 +M+DLH + GY E P +V+ + +Y +GQ+PKF D+++ + W++PT+EV LT Sbjct: 178 AWMLDLHIRQ-GYREAYLPFMVKGDTLYASGQLPKFRDNLYHDIEEDLWMVPTAEVPLTG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ E+++ K LPLR+T P FR E SAGRD RG+ R HQF K E+ ++ EDS E Sbjct: 237 LHMGEVLDEKQLPLRYTAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYIYSKPEDSMKE 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ++ML+ AE+ L L YRVV LCTGDLGF A TYDLEVW G + E+SS S + Sbjct: 297 LQKMLADAEQTCAELGLAYRVVQLCTGDLGFGAAITYDLEVWAPGCGEWLEVSSVSNDTD 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR +YR + + HTLNGSG+ + R LIA++ENY ADGS+ +P VLRP+M Sbjct: 357 FQARRAGIKYRPEDGGKPRLLHTLNGSGLGLPRTLIAVMENYQQADGSIVVPEVLRPWMG 416 Query: 419 NLAVIKKE 426 + VI+ E Sbjct: 417 GVDVIRPE 424 >gi|159044412|ref|YP_001533206.1| seryl-tRNA synthetase [Dinoroseobacter shibae DFL 12] gi|157912172|gb|ABV93605.1| seryl-tRNA synthetase [Dinoroseobacter shibae DFL 12] Length = 431 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 207/430 (48%), Positives = 276/430 (64%), Gaps = 1/430 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI+ IR+ PE D AL +R + P S IL+LD R I E +A +N+ S Q+G Sbjct: 1 MHDIRLIRETPEAFDAALTRRPGVAPVSGEILALDAARREKILAAETAQAEQNAASKQVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G+ + + L+ K ++ L+ E ++L + IPN+P ++ P G Sbjct: 61 AAKAAGDEAEFERLRALVGAKKAEVAALKAAAAEDDAALSARLMEIPNLPFDDTPEGADE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ I+ G +EH+ + + MDF+ A KLSG+RF VL+G +A + RAL Sbjct: 121 ADNVEIKRWGTPRDLGFAPKEHYALPSVVPGMDFEAAAKLSGSRFVVLSGAVARVHRALA 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 QFM+D H ++G TE P+LVR+E M GTGQ+PKF +D + T +G WL+PT+EVSLTNL Sbjct: 181 QFMVDTHVEQNGLTETWTPVLVREEMMLGTGQLPKFGEDSYQTREGWWLVPTAEVSLTNL 240 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+E+ SLP R+ FRSEAGSAGRDT GMLRQHQF K E+VS+TR EDS E Sbjct: 241 VAGEIVEAASLPRRYVAHTQCFRSEAGSAGRDTAGMLRQHQFEKVEMVSVTRPEDSRAEL 300 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +RM CAE IL+ L L YR + LCTGD+GF A +T+D+EVWL GQ+ YREISS S CG+F Sbjct: 301 DRMTGCAEGILEALGLPYRTIVLCTGDMGFGARRTHDIEVWLPGQDAYREISSVSVCGDF 360 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RRMN+R+R +F HTLNGSG+AVGRCLIA+LEN ADGSV +P VL Y+ Sbjct: 361 QARRMNARFRPEGGGKPEFVHTLNGSGLAVGRCLIAVLENGQQADGSVVLPEVLHGYLRG 420 Query: 420 LAVIKKEHIL 429 I + L Sbjct: 421 RTRIDAQGGL 430 >gi|253996801|ref|YP_003048865.1| seryl-tRNA synthetase [Methylotenera mobilis JLW8] gi|253983480|gb|ACT48338.1| seryl-tRNA synthetase [Methylotenera mobilis JLW8] Length = 424 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 208/425 (48%), Positives = 279/425 (65%), Gaps = 7/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + + L+ R E + +L+++ + + +D++A+RN+ S QIG Sbjct: 1 MLDIQALRNDLDGVVSQLQVRGFEFDAAKFSALEQERKTVQTNTQDLQAKRNNASKQIGF 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G V A+ E + L EQL E E+ + L+ L+ +PN+P VP G S Sbjct: 61 AKSKG--EDVSAIMAEVAGLGEQLKAGEVRLAELQADLQSLLLNVPNLPHVSVPQGKSEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG + ++H ++G LG +DFD TKLSGARF+++ G +A + RAL Q Sbjct: 119 DNVEVRKVGTPRTFDFEVKDHTDVGTPLG-LDFDTGTKLSGARFTLMRGQIAKMHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---CTTDGRWLIPTSEVSLT 237 FM+D T +HGY E P LV E + GTGQ+PKF +D+F +LIPTSEV+LT Sbjct: 178 FMLDTQTEQHGYEECYTPYLVNAETLTGTGQLPKFEEDLFSLAHNDSKLYLIPTSEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N EI+ +SLP++ T P FRSEAGS GRDT+GM+RQHQF K E+V I E S+ Sbjct: 238 NTVRDEIVPLESLPIKLTAHTPCFRSEAGSYGRDTKGMIRQHQFDKVEMVQIVHPETSYQ 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ AE +LK L L YRVVSLCTGD+GF A KTYDLEVWL QN YREISS S C Sbjct: 298 ALEEMVGHAENVLKALGLPYRVVSLCTGDMGFGAAKTYDLEVWLPAQNTYREISSVSNCE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR+ +R+R+ + K + HTLNGSG+AVGR L+A+LENY NADGSVT+P VLRPYM Sbjct: 358 AFQARRLQARFRNESGK-PELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVLRPYM 416 Query: 418 NNLAV 422 NNLAV Sbjct: 417 NNLAV 421 >gi|302331781|gb|ADL21974.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159] Length = 428 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPDTVKCKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKDNQLNEIDNKMTSILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFDFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|22299095|ref|NP_682342.1| seryl-tRNA synthetase [Thermosynechococcus elongatus BP-1] gi|30173151|sp|Q8DIN0|SYS_THEEB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|22295277|dbj|BAC09104.1| seryl-tRNA synthetase [Thermosynechococcus elongatus BP-1] Length = 430 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 194/421 (46%), Positives = 265/421 (62%), Gaps = 5/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +R+NP+ L++R + + IL LD + R L ++ ++AR N A +G+ Sbjct: 1 MIDLKQLRENPQAFGDRLRRRGGDFDLDRILELDAQQRQLEQQRSQLQARSNEIGALVGK 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + ALK E + LK++L LE +E ++ L+ L+ IPN P E PIG Sbjct: 61 KIKSGIAPTDPEIQALKAEANALKQKLSDLEPQERQLKEELESLLLTIPNPPSETTPIGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N+ +R G++ + + H++IG LGL D +R+ K++ +RF L G A LERA Sbjct: 121 DETDNVEVRRWGEEYKPTYPCQPHWDIGTRLGLWDVERSVKVAQSRFVTLLGLGAALERA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L QFM+D H E GY EV PLLV ++ GTGQ+PKFA++ F C D WLIPT+EV + Sbjct: 181 LIQFMLDSH-RERGYVEVLPPLLVNTASLTGTGQLPKFAEESFRCADDDLWLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EI+ + LP+ P FR EAGS G+DTRG++R HQF K ELV E S Sbjct: 240 TNLYRDEILAADQLPIYHCAYTPCFRREAGSYGKDTRGLIRLHQFNKVELVKFVHPETSA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHE +++ AE IL+ L L YRV+ LCTGDLGF+A K YDLEVWL YREISSCS Sbjct: 300 AEHEALVADAEFILQALKLPYRVIELCTGDLGFAAMKCYDLEVWLPAAGCYREISSCSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR R++ K +F HTLNGSG+AVGR + AILENY DG+V +P VL+PY Sbjct: 360 GDFQARRAKIRFKGAKHKGTQFVHTLNGSGLAVGRTMAAILENYQQPDGTVRVPEVLQPY 419 Query: 417 M 417 + Sbjct: 420 L 420 >gi|95928408|ref|ZP_01311156.1| seryl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] gi|95135679|gb|EAT17330.1| seryl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] Length = 424 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 278/427 (65%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++IR+N E ++ L R E + + LD + R L+ ++E ++A +N SA IGQ Sbjct: 1 MLDIKFIRENLEQVEQRLATRGSEIRLDEFRQLDTQRRELLGEVESLKAEKNRVSAVIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S V + Q+ +++E E+ L ++ IPN+P E +P+GTS + Sbjct: 61 TK---DKSQVQGEIARMKEVSAQIKRMDEELREISDKLSAILMTIPNLPDESIPVGTSED 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI IR G ++ H++IGE L ++DF+RA KL+GARF++ G A LERAL Sbjct: 118 DNIEIRRWGTPREFAFEAKAHWDIGEDLDILDFERAGKLTGARFALYKGAGARLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+DLHT +H Y E+ P +V ++M GTGQ+PKF +D+F + IPT+EV +TN+ Sbjct: 178 FMLDLHTEQHKYVEMLPPFMVNRDSMTGTGQLPKFEEDLFHVEGPDYFLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ ++ LPL +T P FR EAGS GRDTRG++RQHQF K ELV E+S E Sbjct: 238 HRDEILGAEQLPLCYTAYTPCFRKEAGSHGRDTRGLIRQHQFNKVELVKFVAPENSDAEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++L+ AE++L+ L+L YRVV LCTGD+GFSA +T+D+EVWL GQ++YREISSCS +F Sbjct: 298 DKLLANAEKVLQLLELPYRVVDLCTGDIGFSAARTFDIEVWLPGQSVYREISSCSNFRDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR RYR +F HTLNGSG+AVGR L+AILENY DGSV +P VLRPYM Sbjct: 358 QARRAAIRYRREEGAKPEFVHTLNGSGLAVGRTLLAILENYQQQDGSVIVPEVLRPYMGG 417 Query: 420 LAVIKKE 426 L I + Sbjct: 418 LERITGK 424 >gi|78047250|ref|YP_363425.1| seryl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927384|ref|ZP_08188632.1| seryl-tRNA synthetase [Xanthomonas perforans 91-118] gi|123585378|sp|Q3BUY8|SYS_XANC5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|78035680|emb|CAJ23371.1| seryl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542205|gb|EGD13699.1| seryl-tRNA synthetase [Xanthomonas perforans 91-118] Length = 426 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 211/427 (49%), Positives = 280/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ+P L L+ R + + L+ + + + + ++++++RNS S IG Sbjct: 1 MLDPALLRQHPADLAERLRSTRSFDLNIAELELLESERKRIQVRTQELQSQRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V AL E + ++L E+ + + L+ + +PN+P E+VP+G Sbjct: 61 QAKAKG--EDVAALMAEVAGFGDELKASEEALDAIRAKLEGIALGLPNLPAEDVPLGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ G ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 SENVEQSRWGTPRQFDFAVKDHVELGAPHGWLDGETAAKLSGARFTVLRGPVARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 QFM+DLH EHGY E + PLLV ++M GTGQ+PKF DD+F T R+LIPTSEV L Sbjct: 179 QFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQTEVGESRRYLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EII+++ LPLR T + FR+EAGS GRDTRGM+RQHQF K ELV+ EDS Sbjct: 239 TNIVRDEIIDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACAPEDSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L++L L YR V LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 AEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQNTYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P S + HTLNGSG AVGR +IA++ENY NADGS+ +P VLRPY Sbjct: 359 GDFQARRMQARWRNPVSGKPELLHTLNGSGTAVGRAMIAVMENYQNADGSIDVPQVLRPY 418 Query: 417 MNNLAVI 423 M L I Sbjct: 419 MGGLERI 425 >gi|323143152|ref|ZP_08077851.1| serine--tRNA ligase [Succinatimonas hippei YIT 12066] gi|322417079|gb|EFY07714.1| serine--tRNA ligase [Succinatimonas hippei YIT 12066] Length = 436 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 200/437 (45%), Positives = 284/437 (64%), Gaps = 14/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R + L R+ + E + L+E + L+ + +D++A+RNS S IGQ Sbjct: 1 MLDSKYLRSELKETAERLATRNYKLDVEKLTKLEEMRKDLMVRTQDLQAKRNSMSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A EG + +KNE + + ++L +++ E+ +V + + ++ +PN+P +PIG + Sbjct: 61 AKREGK--DITEIKNEVAKIGDELDVVKAEQDKVLAQINEIALTVPNLPDASLPIGPDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR VG ++H +GE LG++DF A K+SGARF+V+TG + L RAL Sbjct: 119 ANLEIRRVGTPRKFDFPIKDHVALGEGLGMLDFANARKISGARFAVMTGPICALHRALVH 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 +M+DLH GYTEV P LV +++YGTGQ+PKF +D+F T LI Sbjct: 179 YMLDLHCKHQGYTEVYVPYLVNLDSLYGTGQMPKFGEDLFHTSLNGNADGDDVNRHFCLI 238 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN+ EII + LP++ T P FRSEAGSAGRDTRG++R HQF K E+V I Sbjct: 239 PTAEVPLTNMVRGEIIPEEKLPIKVTAHTPCFRSEAGSAGRDTRGLIRMHQFDKVEMVQI 298 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 R EDS+ E + AE +L+ L+L YRV++L TGD+GFS+ KTYDLEVWL QN YRE Sbjct: 299 VRPEDSWEALEILTHDAEAVLQGLELPYRVMTLSTGDIGFSSAKTYDLEVWLPAQNTYRE 358 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS C +FQ+RRM +R R + K ++ HTLNGSG+AVGR L+A++ENY N DGS+T+ Sbjct: 359 ISSCSNCTDFQARRMQARVRRKDGK-IELVHTLNGSGLAVGRTLVAVMENYQNEDGSITV 417 Query: 410 PTVLRPYMNNLAVIKKE 426 P VLRPY+++ VI KE Sbjct: 418 PKVLRPYLDDREVITKE 434 >gi|224477947|ref|YP_002635553.1| seryl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|254783046|sp|B9DPW5|SYS_STACT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|222422554|emb|CAL29368.1| Seryl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 428 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 269/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P++L +K R ++P+ + +L LD K R LI K E+++A RN S +I Sbjct: 1 MLDIKLFRNEPDYLKGKVKLRGMDPKVVDEVLELDGKRRELIGKAEEMKAERNRVSNEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N D + E L + + ++ E +EV L+ +S IPNV ++VP G S Sbjct: 61 EKKR--NKEDADDVIAEMRKLGDDIKEVDTELNEVDEKLQYRLSTIPNVMHDDVPEGDSD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ENI ++ G ++ H+++ E LG+ +FDRA ++SGARF LT A LERAL Sbjct: 119 EENIEVKKWGTPRQFDFEAKAHWDLIEELGMANFDRAARVSGARFVFLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +M+ HT++HGYTE+ P LV +MYGTGQ+PKF +D+F ++IPT+EV LTN Sbjct: 179 NYMLTKHTTQHGYTEMMVPQLVNANSMYGTGQLPKFEEDLFKVEKEGLYMIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E++ + LP +FT + FRSEAGSAGRDTRG++R HQF K ELV + EDS+ Sbjct: 239 YYREEVLSADQLPGKFTAQSACFRSEAGSAGRDTRGLIRLHQFDKVELVRFEKPEDSWDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ S AE IL+ L+L YR V LCTGDLGFS+ KTYDLEVWL + Y+EISSCS + Sbjct: 299 LEQLTSNAEAILEELELPYRRVILCTGDLGFSSSKTYDLEVWLPSYDEYKEISSCSNMTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + HTLNGSG+AVGR AI+ENY NADGS+TIP L P+M Sbjct: 359 FQARRANIRFKRDKDAKPELVHTLNGSGLAVGRTFAAIVENYQNADGSITIPEALVPFMG 418 Query: 419 NLAVIKK 425 I Sbjct: 419 GKTKIGP 425 >gi|110834155|ref|YP_693014.1| seryl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|123345548|sp|Q0VQ06|SYS_ALCBS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|110647266|emb|CAL16742.1| seryl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 429 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 205/431 (47%), Positives = 276/431 (64%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +RQ+ E + AL KR E +LD K + + ++++A R S Q+G+ Sbjct: 1 MLDIRALRQDGEAIKAALSKRGYTLDLEEFAALDAKRKQADMRSQELQADRKKASKQVGE 60 Query: 61 AIAEGNLSLVDALKNETST----LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 I G VD K + + + +L + +++ + IPNVP E VP G Sbjct: 61 LIKSGMA--VDEAKAQVADALQTIDTELDKEVASAKAIQDEIREYLMGIPNVPQEAVPAG 118 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEA-LGLMDFDRATKLSGARFSVLTGHLAHLE 175 ++N+ +R G + ++H +IGEA G +DF+RA KLSGARF+V++G LA + Sbjct: 119 NDEDDNVEVRRWGTPKTLPFEPKDHVDIGEALEGGLDFERAAKLSGARFAVMSGGLARMH 178 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSE 233 RAL FM+D+H+ EHGY EV P LV EA+ GTGQ+PKFA+D+F +LIPT+E Sbjct: 179 RALIDFMLDIHSDEHGYQEVYVPFLVGPEALRGTGQLPKFAEDLFKIEGERELYLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL + EI+E+ ++P R+T P FRSEAGS GRDTRGM+RQHQF K ELV + R E Sbjct: 239 VPVTNLAADEILEANTMPRRYTCHTPCFRSEAGSHGRDTRGMIRQHQFEKVELVQMVRPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S E + AE IL++LDL YRVV LC GDLGFS+ KTYD+EVWL Q YREISSC Sbjct: 299 ESDAALEALTGHAEAILQKLDLPYRVVILCGGDLGFSSSKTYDIEVWLPSQQCYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S ++QSRRM +R+R+P + + HTLNGS +AVGR L+AILENY N DGSVT+P L Sbjct: 359 SNFRDYQSRRMQARWRNPETGKPELVHTLNGSALAVGRTLVAILENYQNDDGSVTVPEAL 418 Query: 414 RPYMNNLAVIK 424 RPYM L +K Sbjct: 419 RPYMRGLERLK 429 >gi|332798257|ref|YP_004459756.1| Seryl-tRNA synthetase [Tepidanaerobacter sp. Re1] gi|332695992|gb|AEE90449.1| Seryl-tRNA synthetase [Tepidanaerobacter sp. Re1] Length = 425 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 190/426 (44%), Positives = 272/426 (63%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++RQNP+ + +L+ R E + L LDE+ R L+ ++E ++ RNS S +I + Sbjct: 1 MLDVKFVRQNPDIVRRSLQNRRTEADLDRFLKLDEERRNLLFEVEKLKNLRNSESEEIAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 D L + +Q+ ++++ +EV +SL++++ IPN+P + VPIG S Sbjct: 61 KKKA--KEPADELIARMKEVSQQIKEMDEKINEVENSLEEILLTIPNIPDDSVPIGESDA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + H++IGE L ++DF+RA K++G+RF+V G A LERAL Sbjct: 119 DNVEVRRWGEPTKFDFEPKPHWDIGEDLDILDFERARKITGSRFTVYKGAGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 FM+DLHT +H Y E+ P +V ++M GTGQ+PKF +D F + +LIPT+EV +TN Sbjct: 179 FMLDLHTQKHNYKEIFPPFIVNRDSMTGTGQLPKFEEDAFKLANNNDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ LP+ + + FR+EAGSAGRDTRG++RQHQF K ELV T + S E Sbjct: 239 LHRDEILSKDDLPIYYVAYSGCFRAEAGSAGRDTRGLIRQHQFNKVELVKFTDAQSSMQE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AEE+LK L L YRVV L TGDLGFS+ KTYD+EVW+ N Y EISSCS + Sbjct: 299 LEKLTADAEEVLKLLGLPYRVVVLSTGDLGFSSAKTYDIEVWMPSYNRYVEISSCSNFKD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR +YR + HTLNGSG+A+GR AILENY +DGSV IP VLR YM Sbjct: 359 FQARRARIQYRPEKGAKPVYVHTLNGSGLAIGRTTAAILENYQQSDGSVIIPEVLREYMG 418 Query: 419 NLAVIK 424 I+ Sbjct: 419 RTNKIE 424 >gi|229542248|ref|ZP_04431308.1| seryl-tRNA synthetase [Bacillus coagulans 36D1] gi|229326668|gb|EEN92343.1| seryl-tRNA synthetase [Bacillus coagulans 36D1] Length = 424 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 188/427 (44%), Positives = 266/427 (62%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R + + + ++ R + E LD++ R LI + E ++ +RN + Q+ Sbjct: 1 MLDIKFLRAHFDEVKERMQHRGEDLTDFEKFSGLDQRRRELIMESEALKNKRNEVTQQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E L E + E++ L+ E +V S L+ L+ IPN+P E VP+G S Sbjct: 61 ALKREKK--DATKLIEEMRGVGEKIKALDAELKQVESELEMLMLSIPNIPHESVPVGDSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G+ P+ + H++I LG++DF+RA K++G+RF G A LERAL Sbjct: 119 EDNVEIRKWGEVPAFGFEPKPHWDIATDLGILDFERAAKVTGSRFVFYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH EHGY EV P +V +M GTGQ+PKF +D F + + IPT+EV +TN Sbjct: 179 NFMLDLHVEEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFLVNEKDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ LP+ + + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ E Sbjct: 239 YHRDEILNGDDLPINYVAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYNE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE++L+ L L Y V+S+CT DLGF+A K YD+EVW+ Q++YREISSCS Sbjct: 299 LEKLTGHAEKVLQLLGLPYHVMSMCTADLGFTAAKKYDIEVWMPSQHVYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + + HTLNGSG+A+GR + AILENY ADGSV +P VLRPYM Sbjct: 359 FQARRANIRFRREPNAKPEHVHTLNGSGLAIGRTVAAILENYQQADGSVVVPEVLRPYMR 418 Query: 419 NLAVIKK 425 +IK Sbjct: 419 -TDIIKP 424 >gi|182683380|ref|YP_001835127.1| seryl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|182628714|gb|ACB89662.1| seryl-tRNA synthetase [Streptococcus pneumoniae CGSP14] Length = 452 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 274/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 29 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILIKVETLKAERNTVSAEIA 88 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 89 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 146 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 147 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 206 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 207 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 265 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 266 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 325 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 326 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREISSCSNTED 385 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N D SVTIP LRPYM Sbjct: 386 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDASVTIPEALRPYMG 445 Query: 419 NLAVIKK 425 VIK Sbjct: 446 GAEVIKP 452 >gi|257417382|ref|ZP_05594376.1| seryl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257159210|gb|EEU89170.1| seryl-tRNA synthetase [Enterococcus faecalis ARO1/DG] Length = 423 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 209/426 (49%), Positives = 283/426 (66%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQN + + L+ R ++ + L LDE R L+ K+E+++ RN SA+I Sbjct: 1 MLDVKMMRQNFDEVKAKLQTRGVKEEILVEFLRLDESRRDLLVKVEEMKKYRNDVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N A E + + L+ E + + L+ + + +PN+P + VP+G Sbjct: 61 QLKR--NKEDATAKIAEMKEVGGNIKALDAEINAIDEELRGITTTLPNLPDDSVPVGAGE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R + + + H+E+ E LG++DF+R K++G+RF G A LERAL Sbjct: 119 EENVEVRRWSEPRTFAFEPKPHWEVAENLGILDFERGAKVAGSRFVYYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FM+DLH EHGYTE+ P +V D AM+GTGQ PKF +D+F D LIPT+EV LTN Sbjct: 179 NFMLDLHVYEHGYTEMITPYIVNDTAMFGTGQFPKFKEDVFQLQDTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI++ K LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILDGKDLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AEEIL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAEEILQKLGLPYRVMALSTGDMGFSAAKTYDLEVWIPAQETYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD N K +++THTLNGSG+AVGR + AILENY N DGSVT+P VL PYM Sbjct: 359 FQARRAMIRYRDENDK-VQYTHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEVLVPYMG 417 Query: 419 NLAVIK 424 NL VIK Sbjct: 418 NLTVIK 423 >gi|117619333|ref|YP_856399.1| seryl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166200594|sp|A0KJE8|SYS_AERHH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|117560740|gb|ABK37688.1| seryl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 431 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 189/434 (43%), Positives = 260/434 (59%), Gaps = 15/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R + L R + +L+EK + L + ++++A RN+ S IG+ Sbjct: 1 MLDPKYLRSDIAEAAARLATRGYVLDVAAVNALEEKRKDLQSRTQELQAERNARSKSIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G V LK E + + E+L + E + + LK + IPN+P + P+G N Sbjct: 61 AARRG--EDVAPLKAEVTKINEELETSKVELDALLAELKVIADAIPNLPSDTTPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G R+H ++GEA +DF KLSG+RF V+ G +A L RAL Q Sbjct: 119 DNVEVRRWGTPREFSFPVRDHIDLGEAAKGVDFKNGVKLSGSRFVVMKGQIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE P LV +++YGTGQ+PKF+ D+F T LI Sbjct: 179 FMLDLHTLQHGYTECYVPYLVNPDSLYGTGQLPKFSQDLFNTGIDGEGEEEGKVRKFSLI 238 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PTSEV LTN+ EI + + LP++ T +P FRSEAGS GRDTRG++R HQF K E+V + Sbjct: 239 PTSEVPLTNMARDEIFDEQELPIKMTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQL 298 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E S+ E M AE++L+ L+L YRV++L TGD+GF A KTYDLEVWL QN YRE Sbjct: 299 VHPEKSWEALEEMAGHAEKVLQLLELPYRVMALSTGDMGFCAAKTYDLEVWLPAQNTYRE 358 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISS S C +FQ+RRM +R R + HTLNGSG+AVGR L+A++ENY DG + I Sbjct: 359 ISSVSNCTDFQARRMQARVRI--DGKPQLLHTLNGSGLAVGRTLVAVIENYQQEDGRIAI 416 Query: 410 PTVLRPYMNNLAVI 423 P L+ YM L I Sbjct: 417 PAALQSYMGGLTHI 430 >gi|166712549|ref|ZP_02243756.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 426 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 212/427 (49%), Positives = 280/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ+P L L+ R + + SL+ + + + + ++++++RNS S IG Sbjct: 1 MLDPALLRQHPADLAERLRSTRSFSLDTAELESLESERKRIQVRTQELQSQRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V AL E + ++L E + + L+ + +PN+P E+VP+G Sbjct: 61 QAKAKG--EDVAALMAEVAGFGDELKASEDALDAIRAKLEIIALGLPNLPAEDVPLGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ G ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 SENVEQSRWGTPRQFDFAVKDHVELGAPHGWLDGETAAKLSGARFTVLRGPVARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 QFM+DLH EHGY E + PLLV ++M GTGQ+PKF DD+F T R+LIPTSEV L Sbjct: 179 QFMLDLHVGEHGYEETNVPLLVNADSMLGTGQLPKFEDDLFQTEVGESRRYLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EII+++ LPLR T + FR+EAGS GRDTRGM+RQHQF K ELV+ EDS Sbjct: 239 TNIVRDEIIDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACAPEDSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L++L L YR V LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 AEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQNTYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P S + HTLNGSG AVGR +IA++ENY NADGS+ +P VLRPY Sbjct: 359 GDFQARRMQARWRNPVSGKPELLHTLNGSGTAVGRAMIAVMENYQNADGSIDVPQVLRPY 418 Query: 417 MNNLAVI 423 M L I Sbjct: 419 MGGLERI 425 >gi|90415908|ref|ZP_01223841.1| seryl-tRNA synthetase [marine gamma proteobacterium HTCC2207] gi|90332282|gb|EAS47479.1| seryl-tRNA synthetase [marine gamma proteobacterium HTCC2207] Length = 425 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 184/428 (42%), Positives = 268/428 (62%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + +L+ + E L+L+ + + L E ++ RN+ S +G+ Sbjct: 1 MLDPKLLRSDLNAVAESLQTKGYTLDCEAFLALEAQRKALQVAAESLQQERNAYSKSMGK 60 Query: 61 AI--AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 I A+ ++ LK + +K + EV L L+ +PN+P VP G + Sbjct: 61 LIGEAKAKGEDIEPLKAKGEQIKNDSAAADLALTEVQGQLDDLLQGLPNIPHSSVPAGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++NI +R G ++H ++G++ +DFD A K++G+RFSV+ G LA L RAL Sbjct: 121 EDDNIELRRWGTPRQFDFEIKDHVDLGDSFNGLDFDVAAKITGSRFSVMRGGLASLHRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR--WLIPTSEVSL 236 QFM++ H EHGY EV P +V E+++GTGQ+PKF +D+F D R +LIPT+EV + Sbjct: 181 TQFMLNTHIGEHGYEEVYVPYIVNRESLFGTGQLPKFEEDLFKLNDEREFYLIPTAEVPI 240 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY +EI++ LP+++ + P FRSEAGS GRDTRGM+RQHQF K E+V ++S+ Sbjct: 241 TNLYRNEIVD--RLPIKYVSHTPCFRSEAGSYGRDTRGMIRQHQFEKVEMVQFVHPDESW 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E ++ AE IL++L+L YR V LC GDLGFSA KT DLEVWL Q YREISSCS Sbjct: 299 DALESLVGHAEAILQKLELPYRSVILCGGDLGFSAAKTIDLEVWLPSQEKYREISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RRM +R+R+ K + HT+NGSG+AVGR L+A++ENY ADGS+ IP VL+P Sbjct: 359 ADFQARRMKARFRNAEGK-PELLHTVNGSGLAVGRTLVAVIENYQQADGSIAIPAVLQPL 417 Query: 417 MNNLAVIK 424 M + I+ Sbjct: 418 MGGITEIR 425 >gi|299820883|ref|ZP_07052772.1| serine--tRNA ligase [Listeria grayi DSM 20601] gi|299817904|gb|EFI85139.1| serine--tRNA ligase [Listeria grayi DSM 20601] Length = 429 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 178/426 (41%), Positives = 259/426 (60%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R N + + L R E LD++ R L+ + E ++ +RN S +I Sbjct: 1 MLDIKVLRNNFDEVKEKLAHRGENLADFEKFGELDKRRRTLLVETESLKGQRNEVSQEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E + E + +++ L+ E + L++++ IPN+P E PIG + Sbjct: 61 ALKREKQDADAK--IEEMRIVGDRIKTLDLELKNIDEKLQRILLSIPNIPHESTPIGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ IR G+ + H+++G L ++DF+RA K++G+RF A LERAL Sbjct: 119 DDNVEIRKWGEVRDFTFEPKAHWDLGTDLDILDFERAAKVTGSRFVFYKKLGARLERALL 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+DLH EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV +TN Sbjct: 179 NFMMDLHADEHGYDEILPPYMVNRVSMTGTGQLPKFEEDAFLVEKEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI ++K LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 LHRDEIFQAKDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYEA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+RL+L YRV+S+CT DLGF+A K YD+EVW+ + YREISSCS Sbjct: 299 LEKLTDNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDIEVWIPSYDSYREISSCSNFEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R+R ++ HT+NGSG+A+GR + AILENY DGS+ IPT L+ YM Sbjct: 359 FQARRAGIRFRREAKGKPEYVHTVNGSGLAIGRTVAAILENYQEEDGSIRIPTALQSYMG 418 Query: 419 NLAVIK 424 + I+ Sbjct: 419 GITKIE 424 >gi|149012162|ref|ZP_01833271.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|303255391|ref|ZP_07341457.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|303259488|ref|ZP_07345465.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|303262351|ref|ZP_07348294.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303264769|ref|ZP_07350686.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|303266608|ref|ZP_07352493.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303268841|ref|ZP_07354628.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|147763764|gb|EDK70698.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|301801323|emb|CBW34006.1| seryl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|302597636|gb|EFL64716.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302636450|gb|EFL66942.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302639422|gb|EFL69880.1| seryl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|302641622|gb|EFL71982.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302643852|gb|EFL74114.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|302645636|gb|EFL75866.1| seryl-tRNA synthetase [Streptococcus pneumoniae BS397] Length = 424 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 274/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILIKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N D SVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDASVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|297717880|gb|ADI50083.1| seryl-tRNA synthetase [Candidatus Odyssella thessalonicensis L13] Length = 429 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 222/431 (51%), Positives = 293/431 (67%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR +PE LD +LK+R EP + +L++DE R + ++++++ +RN + G+ Sbjct: 1 MLDLKLIRSHPEILDASLKRRGKEPLAHRLLAMDETYRSALTELQELQTKRNQIAKSFGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L E +K + LE + +++ L +S IPN+ ++ P G Sbjct: 61 AKRTGQDT--TGLAAEAEQIKASIADLEVKANQLNQELMDEMSTIPNLVADDTPDGLDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR VG+ + + H+E+GE LG MDF+ A KLSG+RF VL LA LERAL Sbjct: 119 ANLEIRQVGEISNFSFQPKPHYELGEDLGKMDFEVAAKLSGSRFVVLYSELARLERALAA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HTS++GY EV AP+LV ++ MYGTGQ+PKF +D F TT G W+IPT+EV LTNL Sbjct: 179 FMIDIHTSQYGYQEVYAPVLVHEKTMYGTGQLPKFREDQFQTTTGHWIIPTAEVVLTNLV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + I+ + LPLR+T P FR+EAG+AGRDTRGM+R HQF K ELVSIT +S EHE Sbjct: 239 AEAILAEEQLPLRYTAYTPCFRAEAGAAGRDTRGMIRLHQFGKVELVSITHPSESKAEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM AEEILK+L L YRV++LC GD+GFSA KTYDLEVWL QN YREISSCS C NFQ Sbjct: 299 RMTMAAEEILKQLKLPYRVMALCAGDMGFSAQKTYDLEVWLPSQNTYREISSCSNCSNFQ 358 Query: 361 SRRMNSRYRD-----PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +RRMN+RYR + +F HTLNGSG+AVGR ++AILENY +DGS+ IP VLRP Sbjct: 359 ARRMNARYRPMATPETPKPAPEFVHTLNGSGLAVGRTIVAILENYQRSDGSIEIPEVLRP 418 Query: 416 YMNNLAVIKKE 426 YM + VI K+ Sbjct: 419 YMGGVEVITKK 429 >gi|121601913|ref|YP_988834.1| seryl-tRNA synthetase [Bartonella bacilliformis KC583] gi|166200601|sp|A1US81|SYS_BARBK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|120614090|gb|ABM44691.1| seryl-tRNA synthetase [Bartonella bacilliformis KC583] Length = 425 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 242/424 (57%), Positives = 315/424 (74%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL R +EP +E +++LD + R + +++ + RRNS S +I Q Sbjct: 1 MLDIKWIRENPEKLDEALASRGIEPHAERLIALDLERRSHVVEVQCAQERRNSASKEIRQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A G+ V+ +K E +K L +E + SL+K++S IPN+PL+ VP G + Sbjct: 61 ALAAGDQKTVERIKAEVEEIKTFLSSAAIKEKRLTESLEKILSAIPNIPLDSVPKGENEE 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 NI+IR G P+ + +EHF++G+ L M+F+RA++LSGARF+VL+G LA LERALGQ Sbjct: 121 ANIVIRHFGTPPTFNFIPKEHFDLGQNLKQMNFERASRLSGARFTVLSGALARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+H +EHGY E+S PLLVRDE +YG Q+PKF+DD+F TTDGRWLI T+EV L NL Sbjct: 181 FMLDVHVNEHGYEEISLPLLVRDEIVYGAAQLPKFSDDLFRTTDGRWLISTAEVPLVNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + E++ LPLRF++L P FRSEAG+AGRDTRGMLRQHQFWK E+VSIT EE S E E Sbjct: 241 NGEVLHESDLPLRFSSLTPCFRSEAGAAGRDTRGMLRQHQFWKVEMVSITTEEQSLIELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE++LKRL+L +R V L TGD+GF++CKTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 301 RMTECAEDVLKRLELPFRTVVLSTGDMGFASCKTYDIEVWLPGQGCYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR K+L F H+LNGSG A+GRCLIAILENY ADGS+ IP L+PYM + Sbjct: 361 GRRMNARYRKDGDKTLHFVHSLNGSGTAIGRCLIAILENYQQADGSIIIPGALQPYMKGI 420 Query: 421 AVIK 424 + I Sbjct: 421 SRIT 424 >gi|258593676|emb|CBE70017.1| Seryl-tRNA synthetase (Serine--tRNA ligase) [NC10 bacterium 'Dutch sediment'] Length = 428 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 196/430 (45%), Positives = 267/430 (62%), Gaps = 4/430 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR N + + L + P + + LD + R + ++E +R RRN S ++ Sbjct: 1 MLDLRLIRDNTDFVRERLAAKGSAPSTLDEFVRLDTERRATLIEVERLRQRRNELSKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +G + + + L LEK+ E L++ +PN+P VPIG SA Sbjct: 61 ELKRQGQSASDAIAQAAADA--DLLVGLEKQLKEKEDLLQEAALFLPNLPHASVPIGQSA 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G + H+E+GEALG++DF+RA ++ +RF+VL G A LERAL Sbjct: 119 ADNVEIRRWGSPRQFDFEPKSHWELGEALGILDFERAAAIAQSRFAVLKGVGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FM+DLH EHGYTE+ PLLV EAM GTGQ+PKF +++F T D ++IPT+EV +TN Sbjct: 179 GFMLDLHGKEHGYTEILPPLLVNAEAMRGTGQLPKFGEELFKTKDEGLYMIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ +LPL + P FR EAGS G+DTRG++RQHQF K ELV + E S+ Sbjct: 239 LHREEILPPGTLPLSYVAYTPCFRREAGSYGKDTRGLMRQHQFNKVELVKLAEPERSYEA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE +L+RL L YR V+LCT DLGF+A KTYD+E+W+ Q YRE+SS S C Sbjct: 299 LEEMTRHAETVLQRLGLPYRTVALCTTDLGFAAAKTYDIELWIPSQGTYREVSSISNCEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR + +F HTLNGSGVAVGR +AILEN+ ADGSV IP +RPYM Sbjct: 359 FQARRANIRYRPSAKAAPQFVHTLNGSGVAVGRTWLAILENFQEADGSVNIPEAIRPYMG 418 Query: 419 NLAVIKKEHI 428 L I K+ + Sbjct: 419 GLERISKDGV 428 >gi|262037439|ref|ZP_06010902.1| serine--tRNA ligase [Leptotrichia goodfellowii F0264] gi|261748529|gb|EEY35905.1| serine--tRNA ligase [Leptotrichia goodfellowii F0264] Length = 423 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 188/425 (44%), Positives = 272/425 (64%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML++++IR+N E + LK R + +L+LDE+ R +++++E ++ RN +S IG+ Sbjct: 1 MLEMRYIRENAEKVREYLKNRKSDFDLNGLLALDEERRNVLQEVEMLKKERNESSTLIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG L + + ++ L+K+ E+ KL IPN E P+G S + Sbjct: 61 YKKEGK--DAAELLDRMQEVSGKIKELDKKLAEIDEKQVKLTFTIPNKLHETTPVGESED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ + H E+G L ++DF+R +KL+G+RF+V G A LERAL Sbjct: 119 DNVEIRKWGEPKKFDFTPKSHDELGVNLEILDFERGSKLAGSRFTVYKGQAARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNL 239 FM+D HT+EHG+ E+ P + + E M GTGQ+PKF DDM+ + +LIPT+EV+LTNL Sbjct: 179 FMLDTHTTEHGFEEIMTPQMAKREIMTGTGQLPKFEDDMYKIEEEDLFLIPTAEVTLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI+ + LP + FR EAGS G+D +G++RQHQF K E+V I E S+ E Sbjct: 239 HNGEILSEEELPKYYCGFTACFRKEAGSGGKDLKGIIRQHQFNKVEMVKIVHPESSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M+S AE IL++L+L YRV++LC+GD+GFSA KTYD+EVW+ Q+ YREISSCS +F Sbjct: 299 EKMVSNAERILQKLELPYRVIALCSGDIGFSASKTYDIEVWVPSQDKYREISSCSNTEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR +YR + F HTLNGSG+AVGR L+AI+ENY DGS+ +P L PYM Sbjct: 359 QARRAMIKYRSKENGKSYFVHTLNGSGLAVGRTLLAIMENYQQEDGSIKVPEALVPYMGG 418 Query: 420 LAVIK 424 L VIK Sbjct: 419 LTVIK 423 >gi|257126930|ref|YP_003165044.1| seryl-tRNA synthetase [Leptotrichia buccalis C-1013-b] gi|257050869|gb|ACV40053.1| seryl-tRNA synthetase [Leptotrichia buccalis C-1013-b] Length = 423 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 191/425 (44%), Positives = 274/425 (64%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML++++IR+N + + LK R+ + + +L DE R L++++E ++ RN +SA IG+ Sbjct: 1 MLEMRYIRENADKVREYLKNRNSDFDLDSLLKFDEDRRNLLQEVEMLKKERNESSALIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG L T+ ++ L+++ E+ +L IPN + P+G + Sbjct: 61 YKQEGKDP--AELLARMQTVSAKIKELDQKVAEIDEKQLELAYTIPNKLSDTTPVGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + H E+G LG++DF+R KL G+RF+V A LERAL Sbjct: 119 DNVEVRKWGTPREFDFEIKSHDELGVELGILDFERGAKLGGSRFTVYKNAAARLERALIA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FMID+HT EHG+ E+ P LVR E M GTGQ+PKFADD + D +LIPT+EV+LTNL Sbjct: 179 FMIDVHTGEHGFEEIFTPQLVRREMMVGTGQLPKFADDAYKIEGDEMYLIPTAEVTLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI++ + LP + FR EAGS GRD +G++RQHQF K E+V I + E S+ E Sbjct: 239 HNSEILDEEELPKYYCGYTACFRKEAGSGGRDLKGLIRQHQFNKVEMVKIVKPETSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M++CAE+IL++L+L YRV++LC+GDLGFSA KTYDLEVW+ Q YREISSCS +F Sbjct: 299 EKMVNCAEKILQKLELPYRVLALCSGDLGFSAAKTYDLEVWVPSQGKYREISSCSNTEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR +YR+ + F HTLNGSG+AVGR L+AI+ENY DG++ +P VL PYM Sbjct: 359 QARRAMIKYREKETGKSHFVHTLNGSGLAVGRTLLAIMENYQQDDGTIKVPEVLVPYMGG 418 Query: 420 LAVIK 424 + VIK Sbjct: 419 MTVIK 423 >gi|227518153|ref|ZP_03948202.1| seryl-tRNA synthetase [Enterococcus faecalis TX0104] gi|257081307|ref|ZP_05575668.1| seryl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|227074396|gb|EEI12359.1| seryl-tRNA synthetase [Enterococcus faecalis TX0104] gi|256989337|gb|EEU76639.1| seryl-tRNA synthetase [Enterococcus faecalis E1Sol] Length = 423 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 208/426 (48%), Positives = 281/426 (65%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQN + + L+ R ++ + L LDE R L+ K+E+++ RN SA+I Sbjct: 1 MLDVKMMRQNFDEVKAKLQTRGVKEEILVEFLRLDESRRDLLVKVEEMKKYRNDVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N A E + + L+ E + + L+ + + +PN+P VP+G Sbjct: 61 QLKR--NKEDATAKIAEMKEVGGNIKALDAEINAIDEELRGITTTLPNLPDASVPVGAGE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R + + + H+E+ E LG++DF+R K++G+RF G A LERAL Sbjct: 119 EENVEVRRWSEPRTFAFEPKPHWEVAENLGILDFERGAKVAGSRFVYYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FM+DLH EHGYTE+ P +V D AM+GTGQ PKF +D+F D LIPT+EV LTN Sbjct: 179 NFMLDLHVYEHGYTEMITPYIVNDTAMFGTGQFPKFKEDVFQLQDTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI++ K LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNNEILDGKDLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AEEIL++L L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS C + Sbjct: 299 LEKMTNNAEEILQKLGLPYRVMALSTGDMGFSAAKTYDLEVWIPAQETYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD N K +++ HTLNGSG+AVGR + AILENY N DGSVT+P VL PYM Sbjct: 359 FQARRAMIRYRDENDK-VQYAHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEVLVPYMG 417 Query: 419 NLAVIK 424 NL VIK Sbjct: 418 NLTVIK 423 >gi|317495625|ref|ZP_07953992.1| seryl-tRNA synthetase [Gemella moribillum M424] gi|316914244|gb|EFV35723.1| seryl-tRNA synthetase [Gemella moribillum M424] Length = 426 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 191/428 (44%), Positives = 270/428 (63%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R NPE + L R+L+ + ++ LD+K R L+ ++ED++A RN S +I Sbjct: 1 MLDIKLFRANPEMVKEKLAARNLDTDVVDLLIDLDKKRRSLLVEVEDLKALRNKRSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N+ + +++ + E ++ + + I IPN+ +E P G + Sbjct: 61 VLKR--KREDATDVINDMKKVSDEITTRDIEVKQISEEINEKIIRIPNLISDETPFGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +ENI +R +GK + H+++ E L + DF+RA K+SG+RF A LERAL Sbjct: 119 DENIEVRRIGKVREFDFEPKAHWDLVEELDIADFERAAKISGSRFVFYKKAGALLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FMID H EHGY E P LV A++GTGQ PKF +D++ LIPT+EV LTN Sbjct: 179 NFMIDTHVIEHGYEEYMVPQLVNKTALFGTGQFPKFVEDVYTVESEGLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI+ LP T + FRSEAGSAGRDTRG++R HQF K E+V + E+S+ + Sbjct: 239 YYNNEILSEDMLPKGVTAFSICFRSEAGSAGRDTRGLIRLHQFNKVEMVRFAKPENSYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE ILK+L+L YRV++LC+GD GFS+ KTYD+EVWL + Y+EISSCS C + Sbjct: 299 LEIMTEHAENILKKLNLPYRVITLCSGDTGFSSAKTYDIEVWLPSYDAYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ ++ ++F HTLNGSG+AVGRCL AI+ENY N DGS+TIP VLRPYM Sbjct: 359 FQARRANMRFKREDTGKVEFIHTLNGSGLAVGRCLAAIIENYQNEDGSITIPEVLRPYMR 418 Query: 419 NLAVIKKE 426 L I+++ Sbjct: 419 GLEKIERD 426 >gi|145299385|ref|YP_001142226.1| seryl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|166200595|sp|A4SNK6|SYS_AERS4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|142852157|gb|ABO90478.1| seryl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 431 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 189/434 (43%), Positives = 260/434 (59%), Gaps = 15/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++R + L R + +L+EK + L + ++++A RN+ S IG+ Sbjct: 1 MLDPKYLRSEIDEAAARLATRGYVLDVAAVNALEEKRKDLQSRTQELQAERNARSKSIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G V LK E + + ++L + E + + +K + IPN+P E P+G N Sbjct: 61 AARRG--EDVAPLKAEVTKINDELETSKIELDALLTEIKSISDAIPNLPSETTPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G R+H ++GEA +DF KLSGARF V+ G +A L RAL Q Sbjct: 119 DNVEVRRWGTPRQFTFPVRDHIDLGEAAKGVDFKNGVKLSGARFVVMKGQIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE P LV +++YGTGQ+PKF+ D+F T LI Sbjct: 179 FMLDLHTLQHGYTECYVPYLVNPDSLYGTGQLPKFSQDLFNTGIEGEGEDEGKMRKFSLI 238 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PTSEV LTN+ EI + + LP++ T +P FRSEAGS GRDTRG++R HQF K E+V + Sbjct: 239 PTSEVPLTNMARDEIFDEQELPIKMTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQL 298 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E S+ E M AE++L+ L+L YRV++L TGD+GF A KTYDLEVWL QN YRE Sbjct: 299 VHPEKSWEALEEMAGHAEKVLQLLELPYRVMALATGDMGFCAAKTYDLEVWLPAQNTYRE 358 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISS S C +FQ+RRM +R R + HTLNGSG+AVGR L+A++ENY DG + I Sbjct: 359 ISSVSNCTDFQARRMQARVRI--DGKPQLLHTLNGSGLAVGRTLVAVIENYQQEDGRIAI 416 Query: 410 PTVLRPYMNNLAVI 423 P L+ YM L I Sbjct: 417 PAALQSYMGGLTHI 430 >gi|28209854|ref|NP_780798.1| seryl-tRNA synthetase [Clostridium tetani E88] gi|46577248|sp|Q899T6|SYS_CLOTE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|28202289|gb|AAO34735.1| seryl-tRNA synthetase [Clostridium tetani E88] Length = 426 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 188/428 (43%), Positives = 267/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR NPE + AL R + + +L LDE+ R ++ ++E ++ +R SA+ Sbjct: 1 MLDLKRIRSNPEEIKKALAGRGEDFDVSVIDKVLQLDEERRNILVEVESLKNKRKQESAK 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I Q EG VD + E L ++ L++ E+ S++ ++ IPN+P VP G Sbjct: 61 IPQFKKEGKN--VDDIMAEMKELAGKIKKLDERLSEIDGSIEYIMLRIPNIPNPNVPNGD 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ IR G+ + + H+++G L ++DF+RA K++G+RF+ G A LERA Sbjct: 119 SDEDNVEIRRWGEATTFEFEPKAHWDLGVNLDILDFERAGKVTGSRFTFYKGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 + + +D H EHGYTE+ P +V ++M GTGQ+PKF +D F +LIPT+EV + Sbjct: 179 VINYYLDTHIDEHGYTEILPPYMVNRKSMTGTGQLPKFEEDAFRLEEQDYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EI+ LP++ + FRSEAGSAGRDTRG++RQHQF K ELV T+ E S+ Sbjct: 239 TNLYRDEILNGSDLPMKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ AE++L+ L + YRVV +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 EELEKLTKDAEDVLQGLGIPYRVVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQSRR N +YR+ F HTLNGSGVAVGR + AI+EN+ ADG++ IP LRPY Sbjct: 359 EDFQSRRANIKYRENPKDKPNFVHTLNGSGVAVGRTVAAIIENFQQADGTIIIPEKLRPY 418 Query: 417 MNNLAVIK 424 M VIK Sbjct: 419 MGGKDVIK 426 >gi|168485545|ref|ZP_02710053.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|183571170|gb|EDT91698.1| seryl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] Length = 424 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 199/427 (46%), Positives = 274/427 (64%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + E + L R ++ + +D K R ++ K+E ++A RN+ SA+I Sbjct: 1 MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L ++ L+ E E+ + L + + +PN+P + VP+G Sbjct: 61 QAKR--NKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R G + H+++GE LG++D++R K++GARF G A LERA+ Sbjct: 119 DDNVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H + GYTEV P +V ++M+GTGQ PKF +D F +D ++ IPT+EV LTN Sbjct: 179 NFMLDEH-GKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVVALSTGDMGFSAAKTYDLEVWIPAQNNYREISSCSNAED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILE Y N DGSVTIP LRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILEIYQNEDGSVTIPEALRPYMG 417 Query: 419 NLAVIKK 425 VIK Sbjct: 418 GAEVIKP 424 >gi|256851919|ref|ZP_05557307.1| seryl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260661820|ref|ZP_05862730.1| seryl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|282931840|ref|ZP_06337321.1| serine--tRNA ligase [Lactobacillus jensenii 208-1] gi|297205544|ref|ZP_06922940.1| serine--tRNA ligase [Lactobacillus jensenii JV-V16] gi|256615877|gb|EEU21066.1| seryl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260547289|gb|EEX23269.1| seryl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|281304003|gb|EFA96124.1| serine--tRNA ligase [Lactobacillus jensenii 208-1] gi|297150122|gb|EFH30419.1| serine--tRNA ligase [Lactobacillus jensenii JV-V16] Length = 435 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 189/438 (43%), Positives = 267/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+ + L R ++P+ + ++++DEK R + + E ++A+RN S +I Sbjct: 1 MLDIKVIRERLDWAKEKLATRGIKPEELDEVVAIDEKRRAKLSETEALKAKRNEVSKEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + EQ+ L++E E+ ++ +PN P + PIG Sbjct: 61 NKKR--NKENADDAIKAMREVGEQIKKLDEEVAELSEKQNYILLRLPNFPDDSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+++G+ L ++DFD A K+SGARF G A LERA+ Sbjct: 119 SYNQEVRKWNEPTKFNFDPKAHWDLGDDLHILDFDTAAKVSGARFVYYKGAGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------RWLIPT 231 F +D +T E GYTEV P LV D++M GTGQ PKF +D++ D LIPT Sbjct: 179 NFFLDENTKE-GYTEVIPPYLVNDDSMQGTGQFPKFTEDVYTIVDNDDPDKPLNLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + EI++ K LP+ T L P+FRSEAGSAGRDTRG++R HQF K E+V + + Sbjct: 238 AEVPLVNYFRGEIVDGKKLPINVTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKVCK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E+S+ E +++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ QN YREIS Sbjct: 298 PEESWNELDKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQNKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K +K HTLNGSG+AVGR + AILENY N DGSVT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-VKLVHTLNGSGLAVGRTVAAILENYQNEDGSVTVPE 416 Query: 412 VLRPYMNNLAVIKKEHIL 429 L PYM+ + I +E L Sbjct: 417 ALVPYMHGMTKITREDTL 434 >gi|259418549|ref|ZP_05742466.1| seryl-tRNA synthetase [Silicibacter sp. TrichCH4B] gi|259344771|gb|EEW56625.1| seryl-tRNA synthetase [Silicibacter sp. TrichCH4B] Length = 430 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 208/429 (48%), Positives = 283/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R S +L LDE R I E +A +N + IG Sbjct: 1 MHDIRAIRENPAAFDAALARRGESALSSQVLELDEARRAKILAAETAQADQNKAAKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ E + K ++ ++ E E+ + L +++ IPN P E+VP G + Sbjct: 61 AKAKGDEAEFERLRAEVADKKAEVATMQAEAKELDAKLTDMLARIPNSPAEDVPEGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G P+ +EHFEI MDF+ A K+SGARF VL G +A + RAL Q Sbjct: 121 DNVEVKRWGDVPAFDFEPKEHFEIAGVAKAMDFETAAKISGARFVVLKGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G TEV++P+LVRDEAMYGT ++PKF DD + TT+G WL+PTSEV LT Sbjct: 181 FMVDTHVDENGLTEVNSPVLVRDEAMYGTDKLPKFGDDSYQTTNGWWLVPTSEVPLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + ++I+ +LP+R+T FRSEAGSAG+DT GMLRQHQF K E+VSI E S E + Sbjct: 241 AGDVIDESTLPIRYTAHTLCFRSEAGSAGKDTSGMLRQHQFEKVEMVSIVHPETSDDEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE IL++L + YR V LCTGD+GF A +T+D+E W+ GQN YREISS ST G+FQ Sbjct: 301 RMLGCAEGILEKLGIPYRTVVLCTGDMGFGARRTFDIEAWVPGQNTYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + +F HTLNGSG+AVGRCLIA+LEN ADGSV +P L PY+ Sbjct: 361 ARRMNARFKPADGGKPEFLHTLNGSGLAVGRCLIAVLENGQQADGSVKLPAALTPYLGGK 420 Query: 421 AVIKKEHIL 429 + + E L Sbjct: 421 STLTAEGTL 429 >gi|94268694|ref|ZP_01291257.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|93451499|gb|EAT02326.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] Length = 424 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 195/419 (46%), Positives = 269/419 (64%), Gaps = 2/419 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML++++IR+N + +R+L+ + LD + R L+ ++E+ R R S +IG Sbjct: 1 MLELRFIRENFALVREKTARRNLDTTALDQFPELDRRRRELLTELEEGRNHRKKVSQEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 EG+ + ET L E+L LE++ V L++++ IPN+ + VP+G Sbjct: 61 ALKKEGDEAAASRRMEETRQLGERLKELEEQLAGVDGQLEEIVMAIPNLCEDSVPVGGDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ R G P ++ H+E+GEA G +DF RA KL+G+RF++LTG A LERAL Sbjct: 121 ADNVEYRRWGAPPEFDFPAKAHWELGEADGSLDFTRAAKLAGSRFALLTGFAARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+DLHT +HGYTEV P LV +M TGQ+PKFA+D+F WLIPT+EV +TN Sbjct: 181 SFMLDLHTEKHGYTEVLPPFLVNSASMTATGQLPKFAEDLFRIEGADLWLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ E + K LP+ + P FRSEAGS GRDT+G++RQHQF K ELV T E S E Sbjct: 241 IHRDETLAEKELPIYYCAYTPCFRSEAGSYGRDTKGLIRQHQFDKVELVKFTTPETSDAE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++LS AE++L+ L+L +RVV+LC+GDLGFSA KTYD+EVW+ QN YREISSCS G+ Sbjct: 301 LEKLLSDAEKVLQLLELPHRVVTLCSGDLGFSARKTYDIEVWMPAQNCYREISSCSNFGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RYR + HTLNGSG+AVGR L AI EN+ ADG++ PT L PY+ Sbjct: 361 FQARRGGIRYRPAGQQKSALVHTLNGSGLAVGRTLAAIYENHQQADGTIKPPTALAPYL 419 >gi|21281738|ref|NP_644824.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|297209443|ref|ZP_06925841.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911467|ref|ZP_07128916.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|30173173|sp|Q8NYY2|SYS_STAAW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|21203173|dbj|BAB93874.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|296885904|gb|EFH24839.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887646|gb|EFK82842.1| serine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] Length = 428 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 267/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P + ++ R +P+ + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPVTVKSKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|227514189|ref|ZP_03944238.1| serine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|260662603|ref|ZP_05863498.1| seryl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] gi|227087452|gb|EEI22764.1| serine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|260553294|gb|EEX26237.1| seryl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] gi|299782726|gb|ADJ40724.1| Seryl-tRNA synthetase [Lactobacillus fermentum CECT 5716] Length = 432 Score = 418 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 280/431 (64%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQ P+ L R ++P+ + +L LD K R L+++ E ++A+RN S +IG Sbjct: 1 MLDIKQIRQQPDWFKEKLATRGVQPEEIDAVLELDAKRRELLQQTETLKAKRNEASKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + D E + E + L+++ L ++ +PNVP E VP+ + Sbjct: 61 EAKRAKQSA--DEAIAEMRQVGEDIKALDEQVEANDKDLFDKLAHLPNVPHEGVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +R VG+ + H+EIGE LG++DF+RA K+SG+RF G A LERAL Sbjct: 119 DGAEELRKVGQARQFDFEPKHHWEIGENLGILDFERAGKVSGSRFVYYVGLGAQLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H + GYTEV P +V AMYGTGQ PKF D++ + LIPT+EV LTN Sbjct: 179 NFMLDEH-MKEGYTEVLPPYIVNAHAMYGTGQFPKFKQDVYQVNGEDMTLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ E+I ++ LP+ T L PSFRSEAGSAGRDTRG++R HQF K E+V T+++ S+ E Sbjct: 238 YFAGEVIPAEKLPVYVTALTPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKQDQSWEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ++M + AE IL++L L Y V++L T D+ F+A +T+DLE+W+ QN YRE+SSCS C + Sbjct: 298 LDKMTANAENILQKLGLPYHVITLTTSDMSFTASETHDLELWMPAQNKYREVSSCSNCLD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR++ +YRD N K L++ HTLNGSG+AVGR L AILENY N DGSVTIP VL PY + Sbjct: 358 FQARRLHMQYRDENGK-LQYVHTLNGSGLAVGRTLAAILENYQNEDGSVTIPEVLVPYFH 416 Query: 419 NLAVIKKEHIL 429 + I KE+ + Sbjct: 417 GITKITKENAV 427 >gi|257452314|ref|ZP_05617613.1| seryl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|257465895|ref|ZP_05630206.1| seryl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|315917051|ref|ZP_07913291.1| seryl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|317058857|ref|ZP_07923342.1| seryl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313684533|gb|EFS21368.1| seryl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313690926|gb|EFS27761.1| seryl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 424 Score = 418 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 195/426 (45%), Positives = 270/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+ ++IR+N E + LK R+ LD + R ++ ++E ++ RN+ SA+I Q Sbjct: 1 MLEARFIRENREKVQEMLKNRNNSLDLSEFDRLDAERREILSEVEALKRERNTESAKIAQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + ++ L+ + EV + ++ IPN+ E PIG Sbjct: 61 FKKEGK--DASEVIKAMGMTSAKIKELDTKLAEVEEKVNYILMIIPNMYHETTPIGKDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ IR G + H+EIGE LG++DF+R KLSG+RF + G A LERAL Sbjct: 119 ENVEIRKWGTPREFAFTPKSHWEIGEELGILDFERGAKLSGSRFVLYRGAAARLERALIS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+D HT+EHGYTE P +V+ E GTGQ+PKF +DM+ TT D +LI TSE+++TN+ Sbjct: 179 FMLDTHTTEHGYTEHLTPFMVKSEVCEGTGQLPKFEEDMYKTTEDNMYLISTSEITMTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ LP +T +P FR EAGS G+D +G++R HQF K E+V IT + S+ E Sbjct: 239 HRKEILDQAELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDNKTSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M++ AE IL++L+L YRV++LC+GD+GFSA KTYDLEVWL QN YREISSCS C +F Sbjct: 299 EKMVNNAETILQKLELPYRVIALCSGDIGFSAAKTYDLEVWLPSQNKYREISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RRM +YR +F HTLNGSG+AVGR L+AI+ENY DGS IP VL PYM Sbjct: 359 QARRMGLKYRPQGENKSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLIPKVLVPYMGG 418 Query: 420 LAVIKK 425 + V+KK Sbjct: 419 MEVVKK 424 >gi|156741477|ref|YP_001431606.1| seryl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] gi|189083582|sp|A7NJB8|SYS_ROSCS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|156232805|gb|ABU57588.1| seryl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] Length = 424 Score = 418 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 178/427 (41%), Positives = 261/427 (61%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+ P+ + AL + ++P Q + +L+ DE+ R L++++E ++A RN+ S +IG Sbjct: 1 MLDIRLIREQPDMVKAALGRAGVDPAQVDAVLAYDEQRRALLREVEKLKALRNAVSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + G D E + +++ L++E V + + N+P VP G Sbjct: 61 KMSDAG---ERDTKIAEMRAVGDRIAALDRELAAVEERQYAALMELRNLPHPAVPDGPDE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N++I G+ + + H+E+GEAL ++DF+R KLSG+RF VL G A L+RAL Sbjct: 118 TYNVVIAQEGEPRAFDFAPKPHWELGEALDIIDFERGVKLSGSRFYVLKGLGARLQRALI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q+M+DLH + GY EV P +V+++ M+G Q+PKF D+++ D WL+PT+EV +TN Sbjct: 178 QWMLDLHIQQ-GYHEVYTPFVVKEQCMWGARQLPKFRDNLYRDVEDDLWLVPTAEVPVTN 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+E+ LPLR+ P FR E SAGRD RG+ R HQF K E+ + S+ E Sbjct: 237 LHRDEILEADQLPLRYCAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYMFVHPDTSYDE 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE + L L +R LCTGDLGF+A +TYD+EVW GQ + E+SSCS Sbjct: 297 LEKLRADAEATCRLLGLTFRTKELCTGDLGFAATRTYDIEVWAPGQGEWLEVSSCSNVEA 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+R N RYR ++ HTLNGSG+ + R LIAI+ENY ADGS+ IP VLRPYM Sbjct: 357 FQARAANIRYRSAPGARPEYVHTLNGSGLGLPRTLIAIMENYQQADGSIIIPDVLRPYMG 416 Query: 419 NLAVIKK 425 VI++ Sbjct: 417 GAEVIRR 423 >gi|125623578|ref|YP_001032061.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363] gi|166222737|sp|A2RJ76|SYS_LACLM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|124492386|emb|CAL97327.1| SerS protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070342|gb|ADJ59742.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 423 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 202/427 (47%), Positives = 278/427 (65%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R +E + E + LD K R LI K E ++A RNS S +I Sbjct: 1 MLDIKKIRADFDGVAAKLATRGVEKEKLEKLHDLDIKRRELIVKSEALKAERNSVSDEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + + ++ ++ E E+ +L ++I +PN+P E PIG Sbjct: 61 QVKRAKGDASTQ--IAAMQKVSAEIKAIDAELAEIEENLNEIIIMLPNLPHESTPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R VG+ P+ + H+++GE LG++D++R K++G+RF G A LERAL Sbjct: 119 DDNVEVRRVGQTPTFNFEPKAHWDLGEDLGILDWERGGKVTGSRFLFYKGAGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL--IPTSEVSLT 237 FM+D H + GYTE+ P +V E+M+GTGQ PKF +D F D R IPT+EV LT Sbjct: 179 NFMLDEH-GKEGYTEMITPYMVNQESMFGTGQYPKFKEDTFELKDDRGFVLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y EI++ LP++FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + + S+ Sbjct: 238 NYYRGEILDGSELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPDQSYD 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+M + AE IL++L L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS C Sbjct: 298 ELEKMTANAENILQKLGLAYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RYRD + K ++ HTLNGSG+AVGR + AILENY N DGS+T+P +LRPYM Sbjct: 358 DFQARRAQIRYRDEDGK-VQLLHTLNGSGLAVGRTVAAILENYQNEDGSITVPEILRPYM 416 Query: 418 NNLAVIK 424 L VIK Sbjct: 417 GGLEVIK 423 >gi|27379859|ref|NP_771388.1| seryl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] gi|46577251|sp|Q89L00|SYS_BRAJA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|27353012|dbj|BAC50013.1| seryl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] Length = 443 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 230/444 (51%), Positives = 297/444 (66%), Gaps = 19/444 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP+ D L +R L+P S +L++DE+ R I E +ARRN+ S +IG Sbjct: 1 MHDIKSIRDNPQAFDAGLARRGLKPLSASLLAIDERRRAAILASEQAQARRNAASKEIGD 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E + LK +P LE L K +S IPN+P +EVP G + Sbjct: 61 AKKAKDEARAATLMAEVAELKTTMPQLEAAAKAADEELTKELSAIPNIPFDEVPDGVDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ G K + + H ++G ALG MDF+ A KLSGARF VL LA LERA+GQ Sbjct: 121 GNVQHHVFGNKRNYGFAPKLHDDLGNALGYMDFEAAAKLSGARFVVLKKGLARLERAIGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC---------------TTDG 225 FM+DLHT+EHGYTE++ PLLVR+E M+GTGQ+PKF DD F T+ Sbjct: 181 FMLDLHTTEHGYTEINPPLLVRNEVMFGTGQLPKFEDDQFWAIKGELLASPDHERLKTER 240 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 LIPT+EVSLTNL I++ K LP+R T L P FR+EAG+AGRDTRGM+RQHQF K E Sbjct: 241 LGLIPTAEVSLTNLARESILDEKQLPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVE 300 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ- 344 LVSIT E S E ERMLSCAE++L++LDLHYRV++LC GD+GFS+ KTYD+EVW+ GQ Sbjct: 301 LVSITTPEASKDELERMLSCAEQVLQKLDLHYRVMTLCAGDMGFSSQKTYDIEVWMPGQG 360 Query: 345 --NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 ++REISSCS CG+FQ+RRM++R R P+ K +F HTLNGSG AVGR LIA++E Y Sbjct: 361 DGGMFREISSCSVCGDFQARRMDARSRGPDGK-PRFVHTLNGSGTAVGRALIAVMETYQQ 419 Query: 403 ADGSVTIPTVLRPYMNNLAVIKKE 426 DGS+ +P+VL+PYM L VI ++ Sbjct: 420 EDGSIAVPSVLQPYMGGLKVISRD 443 >gi|257463664|ref|ZP_05628055.1| seryl-tRNA synthetase [Fusobacterium sp. D12] gi|317061213|ref|ZP_07925698.1| seryl-tRNA synthetase [Fusobacterium sp. D12] gi|313686889|gb|EFS23724.1| seryl-tRNA synthetase [Fusobacterium sp. D12] Length = 424 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 198/426 (46%), Positives = 271/426 (63%), Gaps = 3/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+ ++IR+N E + LK R+ LD + R ++ ++E ++ RN+ SA+I Q Sbjct: 1 MLEARFIRENREKVQEMLKNRNNSLDLSEFDRLDAERREILSEVEALKRERNTESAKIAQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + E ++ L+ + EV + ++ IPN+ E PIG Sbjct: 61 FKKEGK--DASEVIKEMGITSAKIKELDAKLAEVEEKVSHILMIIPNMYHETTPIGKDEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ IR G L + H+EIGE LG++DF+R KLSG+RF + G A LERAL Sbjct: 119 ENVEIRKWGTPREFSFLPKSHWEIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALIS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+D HT+EHGYTE P +V+ E GTGQ+PKF +DM+ TT D +LI TSE+S+TN+ Sbjct: 179 FMLDTHTTEHGYTEHLTPFMVKAEVCEGTGQLPKFEEDMYKTTEDNMYLISTSEISMTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+E LP +T +P FR EAGS G+D +G++R HQF K E+V IT + S+ E Sbjct: 239 HRKEILEQAELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDNKTSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M++ AE IL++L+L YRV++LC+GD+GFSA KTYDLEVWL QN YREISSCS C +F Sbjct: 299 EKMVNNAEAILQKLELPYRVIALCSGDIGFSAAKTYDLEVWLPSQNKYREISSCSNCEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RRM +YR +F HTLNGSG+AVGR L+AI+ENY DGS IP L PYM Sbjct: 359 QARRMGLKYRPQGENKSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLIPKALVPYMGG 418 Query: 420 LAVIKK 425 + V+KK Sbjct: 419 MEVVKK 424 >gi|313889655|ref|ZP_07823298.1| serine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] gi|313121952|gb|EFR45048.1| serine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] Length = 425 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 194/428 (45%), Positives = 274/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + + ++ LD++ R L+ K E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDSVAAKLKTRGVSEETLSHLKELDQERRQLLIKSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + + ++ E E+ + ++I+ +PN P + VP+G Sbjct: 61 QAKRQKD--DAQQQIADMQKVSAAIKTIDNELAEIDEKVTEIITTLPNTPHDSVPLGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G + H+++GEAL ++D++R K++GARF A LERAL Sbjct: 119 EENVEVRRWGTPRQFDFEIKAHWDLGEALDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYQEIIPPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYD+EVW+ QN YREISSCS + Sbjct: 298 LEKMTTNAENILQKLELPYRVIALCTGDMGFSAAKTYDVEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 + I + Sbjct: 418 GVDTISPK 425 >gi|116621601|ref|YP_823757.1| seryl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] gi|122254610|sp|Q024V4|SYS_SOLUE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116224763|gb|ABJ83472.1| seryl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 424 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 271/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D+ R N E L L R + LD K R I + E ++AR+N S +IG+ Sbjct: 1 MHDLSHFRNNFEKLAERLATRGGAINLDGFRDLDLKRRSAISQAEQLKARKNQESLEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG + + E + +Q+ L+++ V +KL+S IPN+P E VP+G SA+ Sbjct: 61 LKREG--ADTAERQKEVRAIADQIVALDEQVKTVDEEFQKLLSGIPNIPHESVPVGKSAD 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + H+++G LG++DF+RA K++GARF++ G A LERAL Sbjct: 119 DNVEVRRSGEPAKFDFEPKAHWDLGPELGILDFERAVKITGARFALYWGAGARLERALVN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 F +D+HT +HGYTEV P +V ++YGTGQ+PKFA+D+F WLIPT+EV +TN+ Sbjct: 179 FFLDVHTQQHGYTEVLPPFMVNSASLYGTGQLPKFAEDLFKIENSDFWLIPTAEVPVTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y E +E + LP++ P FRSEAGS GRD RG++RQHQF K ELV TR E S+ E Sbjct: 239 YRDETLEGEQLPVKLCAYTPCFRSEAGSYGRDVRGIIRQHQFQKVELVKFTRPEQSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++ + AE+IL RL L +R V LCTGD+G S+ KTYD+EVWL GQN Y+EISSCS F Sbjct: 299 DKLTADAEDILVRLGLPFRTVVLCTGDMGPSSAKTYDIEVWLPGQNNYKEISSCSNFEAF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR RYR K +F HT+NGSG+AVGR +AI+ENY DGSV IP LRPYMN Sbjct: 359 QARRAGIRYRT--GKKSEFAHTINGSGLAVGRTWVAIIENYQQMDGSVIIPEALRPYMN- 415 Query: 420 LAVIKKE 426 +I+ E Sbjct: 416 AEIIRPE 422 >gi|184154542|ref|YP_001842882.1| seryl-tRNA synthetase [Lactobacillus fermentum IFO 3956] gi|238689196|sp|B2GF13|SYS_LACF3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|183225886|dbj|BAG26402.1| seryl-tRNA synthase [Lactobacillus fermentum IFO 3956] Length = 432 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 280/431 (64%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQ P+ L R ++P+ + +L LD K R L+++ E ++A+RN S +IG Sbjct: 1 MLDIKQIRQQPDWFKEKLATRGVQPEEIDTVLELDAKRRELLQQTETLKAKRNEASKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + D E + E + L+++ L ++ +PNVP E VP+ + Sbjct: 61 EAKRAKQSA--DEAIAEMRQVGEDIKALDEQVEANDKDLFDKLAHLPNVPHEGVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +R VG+ + H+EIGE LG++DF+RA K+SG+RF G A LERAL Sbjct: 119 DGAEELRKVGQARQFDFEPKHHWEIGENLGILDFERAGKVSGSRFVYYVGLGAQLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H + GYTEV P +V AMYGTGQ PKF D++ + LIPT+EV LTN Sbjct: 179 NFMLDEH-MKEGYTEVLPPYIVNAHAMYGTGQFPKFKQDVYQVNGEDMTLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ E+I ++ LP+ T L PSFRSEAGSAGRDTRG++R HQF K E+V T+++ S+ E Sbjct: 238 YFAGEVIPAEKLPVYVTALTPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKQDQSWEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ++M + AE IL++L L Y V++L T D+ F+A +T+DLE+W+ QN YRE+SSCS C + Sbjct: 298 LDKMTANAENILQKLGLPYHVITLTTSDMSFTASETHDLELWMPAQNKYREVSSCSNCLD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR++ +YRD N K L++ HTLNGSG+AVGR L AILENY N DGSVTIP VL PY + Sbjct: 358 FQARRLHMQYRDENGK-LQYVHTLNGSGLAVGRTLAAILENYQNEDGSVTIPEVLVPYFH 416 Query: 419 NLAVIKKEHIL 429 + I KE+ + Sbjct: 417 GITKITKENAV 427 >gi|258510034|ref|YP_003183468.1| seryl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476760|gb|ACV57079.1| seryl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 426 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 179/427 (41%), Positives = 260/427 (60%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQ P+ LK++ ++P + + +L D + R + ++E ++A RN S I Sbjct: 1 MLDIRAIRQQPDVFKAKLKRKKVDPAEIDRLLEADARWRDHLAEVERLKALRNQTSEAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +G + +++ L++E E+ ++ L+ +PNVP + VP G S Sbjct: 61 RKKRQG--EDASEDIARMREVSDRIQALDEEVRELERQVRDLLLALPNVPHDSVPDGESE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N +I++ G P + H+EI EAL ++D +RA K++G+RF + G A LERAL Sbjct: 119 DDNPVIKTWGDLPKFSFEPKPHWEIAEALDIVDSERAVKITGSRFVLYKGLGARLERALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FM+D H HGYTE+ + +E++ GTG +PKF D+MF +LIPT+EV LTN Sbjct: 179 NFMLDFHVERHGYTEMFPAFIANEESLIGTGNLPKFGDEMFKIEGLPYYLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+ + LP++F + FRSEAGSAG+DTRG++R HQF K ELV++ E S+ Sbjct: 239 YYRDEILSADQLPVKFAGYSACFRSEAGSAGKDTRGLIRLHQFQKVELVNLCLPEQSYEV 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE +L+ L L YR + +CTGDLG K YD+EVWL QN YREISSC+ + Sbjct: 299 LEQLTREAEAVLEALQLPYRRIEICTGDLGAKDAKKYDIEVWLPAQNRYREISSCTNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR N R+R +F HTLNGSG+A+GR + AILENY DGSV IP L PYM Sbjct: 359 YQARRANLRFRREERGKPEFVHTLNGSGLAIGRTVAAILENYQQEDGSVLIPRALVPYMG 418 Query: 419 NLAVIKK 425 + I K Sbjct: 419 GIERIAK 425 >gi|289549035|ref|YP_003474023.1| seryl-tRNA synthetase [Thermocrinis albus DSM 14484] gi|289182652|gb|ADC89896.1| seryl-tRNA synthetase [Thermocrinis albus DSM 14484] Length = 424 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 211/428 (49%), Positives = 286/428 (66%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ IR+ P ++ L++R + L+LD + R LIK+IE +R RN+ S QI Sbjct: 1 MLDVELIRKQPLYVRQKLERRDPQYAQLLDQFLALDTRRRELIKEIEQLRFLRNTKSKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ +G L+ E L+E++ +++ E EV + L+ IPN+P + VP+G Sbjct: 61 GELKKKG--ENTSLLEEEVKELREKIDLMDSELREVERQAQDLLLRIPNLPHDSVPVGED 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ I+ G+ PS + H+EIGE L ++DF+R KLSG+RF+VL G A LERAL Sbjct: 119 EKDNVEIKRWGEPPSFTFTPKPHWEIGEYLNILDFERGAKLSGSRFTVLKGWGAKLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLT 237 FM+DLHT GYTEV P LV+ E + GTGQ+PKF +D++ C D +LIPT+EV+LT Sbjct: 179 INFMLDLHT-SRGYTEVMTPHLVKPEILVGTGQLPKFEEDLYKCERDQLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+ EI+ + LP+ T P +R EAG+ G+D RG++RQHQF K ELV I + EDS+ Sbjct: 238 NLFREEILREEDLPIYLTAYTPCYRREAGAYGKDVRGIIRQHQFDKVELVKIVKPEDSYK 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ER+L AEE+L+ L L YRVV LCTGDLGFS+ KTYD+EVW Q YRE+SSCS C Sbjct: 298 ELERLLEDAEEVLRLLQLPYRVVELCTGDLGFSSAKTYDIEVWFPSQGRYREVSSCSNCE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RRMN RYRD N + L+F HTLNGSG+AVGR L AILENY DGSV +P VLR Y+ Sbjct: 358 DFQARRMNLRYRDANGR-LRFVHTLNGSGLAVGRVLAAILENYQREDGSVEVPPVLRDYL 416 Query: 418 NNLAVIKK 425 +I++ Sbjct: 417 -GTDIIRR 423 >gi|126667373|ref|ZP_01738345.1| seryl-tRNA synthetase [Marinobacter sp. ELB17] gi|126628129|gb|EAZ98754.1| seryl-tRNA synthetase [Marinobacter sp. ELB17] Length = 424 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 192/425 (45%), Positives = 267/425 (62%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R E + L ++ + L+E+ R L + E +++ +N S IG+ Sbjct: 1 MLDPKRVRSQTEDIARRLAIKNFTFDTATFEQLEERRRGLQVRTETLQSEQNKKSKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L +E LK + E E E+ L ++ IPNVP E VP G + Sbjct: 61 AKASG--EDIQPLLDEVDDLKARKSEAEDELRELQEELNHFLAAIPNVPDEGVPAGKDDD 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R+ G + ++H +GEAL MDF+ AT L+ +RF V+ G +A L RAL Q Sbjct: 119 DNVELRTWGTPREFLFEPQDHVALGEALNGMDFETATNLAHSRFVVMRGQVARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+DLH EHGYTE P LV +A++GTGQ+PKF D+F +LIPT+EV +TN Sbjct: 179 FMLDLHVEEHGYTEAYVPYLVNADALFGTGQLPKFEADLFRVESEKPLYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L + I+ + LPL+ P FRSEAGS GRDTRG++RQHQF K ELV + R EDS Sbjct: 239 LIADSILNAAELPLKMVCHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQVVRPEDSDAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + + AE++L+ L+L YR+++LC GD+GFSA +TYDLEVWL GQ +REISSCS + Sbjct: 299 LDALTGHAEKVLQLLELPYRIMALCGGDMGFSAARTYDLEVWLPGQQKFREISSCSNTRD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R+P + + HTLNGSG+AVGR LIA++ENY DGS+T+P VL+PYM Sbjct: 359 FQARRMQARWRNPETGKPEPVHTLNGSGLAVGRALIAVMENYQQEDGSITVPDVLKPYMR 418 Query: 419 NLAVI 423 L I Sbjct: 419 GLDKI 423 >gi|42521723|ref|NP_967103.1| seryl-tRNA synthetase [Bdellovibrio bacteriovorus HD100] gi|67461781|sp|Q6MRK1|SYS_BDEBA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|39574253|emb|CAE77757.1| serS [Bdellovibrio bacteriovorus HD100] Length = 431 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 197/434 (45%), Positives = 265/434 (61%), Gaps = 12/434 (2%) Query: 1 MLDIQWIRQNPE-------HLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRN 52 M+DI+ + + E L R + E I+ L++K + LI + E +A +N Sbjct: 1 MIDIKLLEKKAETGTSYYDEYKQGLVNRGASTEVLEQIMELNKKRKELITQAETAKASQN 60 Query: 53 SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 S +IG+ EG A+ E LK Q+ LE + E + L IPN P Sbjct: 61 KLSGEIGKIKREGG--DASAILAEVDVLKTQVKELEAKAAEADQQVTNLALVIPNKPHSS 118 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G+S +N I+ VG ++EH+E+GEAL ++DF+RA K +G RF+ L G A Sbjct: 119 VPVGSSEKDNKEIKVVGTPTQFSFKAKEHWELGEALNIIDFERAGKTTGTRFAFLKGAAA 178 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPT 231 +ERAL QFM+D H+ +HGYTE+ P +V ++ GTG PKF +D+F +LIPT Sbjct: 179 QMERALIQFMMDKHSMKHGYTEMIPPFMVNSNSLLGTGNFPKFKEDVFHLEGSDLYLIPT 238 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV +TN Y++EI++ K LP F +P FRSEAGSAGRDT+G++RQHQF K EL+ Sbjct: 239 AEVPVTNYYNNEILDEKDLPQSFCAYSPCFRSEAGSAGRDTKGLIRQHQFDKVELMVFAH 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 + S HE + S AE+IL L+L +R V LCTGD+GF + KTYDLEVWL GQN YREIS Sbjct: 299 PDKSHEVHEALTSHAEQILMDLELPFRRVLLCTGDMGFGSAKTYDLEVWLPGQNAYREIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS +FQ+RR N R+R K +F HTLNGS +AVGR L+AILENY DGSV IP Sbjct: 359 SCSNFEDFQARRANIRFRSAGGK-PQFVHTLNGSALAVGRTLVAILENYQREDGSVGIPK 417 Query: 412 VLRPYMNNLAVIKK 425 L+PYM I+K Sbjct: 418 ALQPYMGGRTEIRK 431 >gi|329770181|ref|ZP_08261572.1| seryl-tRNA synthetase [Gemella sanguinis M325] gi|328837082|gb|EGF86724.1| seryl-tRNA synthetase [Gemella sanguinis M325] Length = 426 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 191/428 (44%), Positives = 272/428 (63%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R NPE + L R+L+ + + +L LD+K R L+ ++ED++A RN S +I Sbjct: 1 MLDIKLFRANPEMVKAKLSARNLDTEVVDVLLDLDKKRRSLLVEVEDLKALRNKRSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + NE + + + + E ++ + + I IPN+ +E P G + Sbjct: 61 VLKR--KREDATDVINEMKKVSDDITERDIEVKQISEEINEKIIRIPNLISDETPYGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +ENI +R +G+ + H+++ E L + DF+RA K+SG+RF A LERAL Sbjct: 119 DENIEVRRIGQVREFGFEPKAHWDLVEELDIADFERAAKISGSRFVFYKKAGALLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FM+D+H +EHGY E P LV A++GTGQ PKF +D++ LIPT+EV LTN Sbjct: 179 NFMLDIHVTEHGYEEYMVPQLVNRTALFGTGQFPKFVEDVYTVESEGLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI+ LP T + FRSEAGSAGRDTRG++R HQF K E+V ++ E+S+ + Sbjct: 239 YYNDEILSEDMLPKGVTAFSICFRSEAGSAGRDTRGLIRLHQFNKVEMVRFSKPENSYEQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE ILK+L+L YRV++LC+GD GFS+ KTYD+EVWL N Y+EISSCS C + Sbjct: 299 LEIMTGHAENILKKLNLPYRVITLCSGDTGFSSAKTYDIEVWLPSYNAYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ ++ ++F HTLNGSG+AVGRCL AI+ENY N DGS+T+P VLRPYM Sbjct: 359 FQARRANMRFKREDTGKVEFIHTLNGSGLAVGRCLAAIIENYQNEDGSITVPEVLRPYMR 418 Query: 419 NLAVIKKE 426 L I+++ Sbjct: 419 GLEKIERD 426 >gi|40063328|gb|AAR38146.1| seryl-tRNA synthetase [uncultured marine bacterium 578] Length = 429 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 195/432 (45%), Positives = 276/432 (63%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+ + +R N + + LK+R+ L+++ +++ + +D++ RN+ S IGQ Sbjct: 1 MLESKLLRGNIDFVVEQLKRRNFSFDVAEFNKLEDQRKVIQVQTQDLQNLRNTKSKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L E S L E+L + +++ + +++ IPN+P VP G S + Sbjct: 61 AKASG--ENIEPLLEEVSDLGEKLDNAKSALNDLQVKIDEIVMAIPNIPHPSVPEGQSED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI + G+ ++H ++GE G +DF A K+SG+RF V+TG +A L+RAL Q Sbjct: 119 DNIELSKWGEPKKFDFEPKDHVDLGEMHG-IDFVAAAKISGSRFVVITGKVAKLQRALTQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------RWLIPTS 232 FM+D HT ++GYTE AP LV +++ GTGQ+PKF D+F T +LIPT+ Sbjct: 178 FMLDQHTEKNGYTETYAPYLVNADSLTGTGQLPKFEADLFKTHLHGEEGEAKSLYLIPTA 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TN+ I++ LPL+F P FRSEAGS G+DTRG++RQHQF K ELV I+ Sbjct: 238 EVPVTNIVRDSILKDSELPLKFVAHTPCFRSEAGSYGKDTRGLIRQHQFEKVELVQISNP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 ++S+ E + AE ILK L+L YR V LCTGDLGFS+ KTYDLEVWL GQ YREISS Sbjct: 298 DNSYDVLEELTEHAEGILKLLELPYRKVILCTGDLGFSSAKTYDLEVWLPGQAAYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS FQ+RRM R+++P +K +F HTLNGSG+AVGR L+A++ENY NADGS+TIP V Sbjct: 358 CSCFEGFQARRMQLRWKNPETKESEFLHTLNGSGLAVGRTLVAVIENYQNADGSITIPKV 417 Query: 413 LRPYMNNLAVIK 424 L+ YM L IK Sbjct: 418 LQSYMGGLTTIK 429 >gi|257454217|ref|ZP_05619487.1| seryl-tRNA synthetase [Enhydrobacter aerosaccus SK60] gi|257448390|gb|EEV23363.1| seryl-tRNA synthetase [Enhydrobacter aerosaccus SK60] Length = 421 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 193/425 (45%), Positives = 270/425 (63%), Gaps = 7/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R + + L KR E + ++E+ + + K E+++A++N+ + QIG Sbjct: 1 MIDPKLLRTELDTVAEKLAKRGYELDKAFWQQVEEQRKSIQVKTEELQAKKNAGAKQIGV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G DAL E +T+ ++ E + + IPN+P + VP G N Sbjct: 61 MKRNG--ENTDALMAEMATISSEMKQAEDALKALQEKILAAALTIPNLPDDSVPAGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ ++H ++GE LGL+DF+ A KL+G+RFSVL G LA L RAL Sbjct: 119 DNVEMRRWGEPRQFDFEVKDHSDLGENLGLLDFEMAAKLTGSRFSVLKGQLAKLNRALIA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+ HT ++GYTE+ P +V +++ GTGQ+PKF +D+F +LIPTSEV LTN Sbjct: 179 FMLTTHTDKYGYTEMYVPYMVNADSLLGTGQLPKFEEDLFKLRGEKEYYLIPTSEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +I++ ++LP++ T P FRSEAGSAGRDTRG++RQHQF K E+V I E S Sbjct: 239 SVRDKILDPEALPIKVTAHTPCFRSEAGSAGRDTRGLIRQHQFEKVEMVQIVHPETSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL++L L YRV+ LC GD+GFSA KTYD+EVWL Q YREISSCS CG+ Sbjct: 299 LEDMTGQAEYILQQLGLPYRVIVLCGGDMGFSAVKTYDIEVWLPSQTTYREISSCSNCGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R +D K + HTLNGSG+AVGR L+AI+ENY NADG++T+P VLRPYM Sbjct: 359 FQARRMQARVKD--GKKTELVHTLNGSGLAVGRTLLAIMENYQNADGTITVPEVLRPYM- 415 Query: 419 NLAVI 423 + VI Sbjct: 416 GVDVI 420 >gi|21231048|ref|NP_636965.1| seryl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768947|ref|YP_243709.1| seryl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|188992061|ref|YP_001904071.1| seryl-tRNA synthetase [Xanthomonas campestris pv. campestris str. B100] gi|30173176|sp|Q8PA92|SYS_XANCP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|81305089|sp|Q4UTD4|SYS_XANC8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|229470725|sp|B0RUV8|SYS_XANCB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|21112675|gb|AAM40889.1| seryl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574279|gb|AAY49689.1| seryl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|167733821|emb|CAP52027.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 426 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 208/427 (48%), Positives = 274/427 (64%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ+P L L+ R + + + SL+ + + + + +++++ RNS S IG Sbjct: 1 MLDPALLRQHPADLAERLRSTRGFDLNTAELESLESERKRIQVRTQELQSLRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V AL E + ++L E + + L+ + IPN+P VP G Sbjct: 61 QAKAKG--EDVAALMAEVAGFGDELKASEDALDVIRAQLEGIALGIPNLPAANVPAGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ G ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 SENVEQARWGTPRQFDFAVKDHVELGAPHGWLDGETAAKLSGARFTVLRGPIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSL 236 QFM+DLH EHGY E + PLLV ++M GTGQ+PKF DD+F T R+LIPTSEV L Sbjct: 179 QFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQTEVGDSKRYLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ I++++ LPLR T + FR+EAGS GRDTRGM+RQHQF K ELV+ EDS Sbjct: 239 TNIVRDAIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACSPEDSE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L++L L YR V LCTGD+GFSA KTYDLEVWL Q YREISSCS C Sbjct: 299 AEHQRMTRCAEVVLEKLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQATYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P S + HTLNGSG AVGR +IA++ENY NADGS+ +P LRPY Sbjct: 359 GDFQARRMQARWRNPASGKPELLHTLNGSGTAVGRAMIAVMENYQNADGSIDVPDALRPY 418 Query: 417 MNNLAVI 423 M L I Sbjct: 419 MGGLERI 425 >gi|258423229|ref|ZP_05686121.1| seryl-tRNA synthetase [Staphylococcus aureus A9635] gi|257846558|gb|EEV70580.1| seryl-tRNA synthetase [Staphylococcus aureus A9635] Length = 428 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + IL LDE+ R LI E ++ARRN S +I Sbjct: 1 MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISATEGMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M+ Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMS 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|310657365|ref|YP_003935086.1| seryl-tRNA synthetase [Clostridium sticklandii DSM 519] gi|308824143|emb|CBH20181.1| seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Clostridium sticklandii] Length = 425 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 184/427 (43%), Positives = 269/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ I+++ E + + KR + E ++ LD+K L++++E ++ +N +S I Sbjct: 1 MLDIKRIKRDLEEIKPLMAKRGEKDFSFEEVIELDDKRIELLQEVEALKNEQNVDSKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q EG + D L L EQ+ L+ + EV L + + IPNVP +VP G + Sbjct: 61 QYKKEGKNT--DELMARLKELSEQIKNLDDKVKEVEEDLFQKLLRIPNVPHPDVPTGDTD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ + ++ H++IG L ++DF+ A K++G+RF++ A LER+L Sbjct: 119 EDNLEVRKWGEPTAFDFEAKAHWDIGTDLNILDFEAAGKITGSRFTLYKDLGARLERSLI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 F ++ HT+EHGYTEV P + + GTGQ+PKF +DMF + +PT+EV +TN Sbjct: 179 NFFLNTHTAEHGYTEVLPPFIANRTSFIGTGQLPKFEEDMFKLEGFEYFLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ +EI+ L ++ P FR+EAGSAGRDTRG++RQHQF K ELV T+ EDS+ E Sbjct: 239 IHQNEIMNGDDLTTKYCAYTPCFRAEAGSAGRDTRGLIRQHQFNKVELVKFTKPEDSYKE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE++L+ L L YRVV +C+GDLGF+A YDLEVW+ N Y EISSCS + Sbjct: 299 LETLTADAEKVLQLLGLPYRVVRICSGDLGFTAAYKYDLEVWMPSYNRYVEISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + +F HTLNGSGVA+GR L AILENY ADG+V +P VLRPYM Sbjct: 359 FQARRANIRFKRDKASKPEFVHTLNGSGVAIGRALAAILENYQQADGTVVVPEVLRPYMG 418 Query: 419 NLAVIKK 425 +IKK Sbjct: 419 TDKIIKK 425 >gi|255656824|ref|ZP_05402233.1| seryl-tRNA synthetase [Clostridium difficile QCD-23m63] gi|296452344|ref|ZP_06894047.1| serine--tRNA ligase [Clostridium difficile NAP08] gi|296877695|ref|ZP_06901723.1| serine--tRNA ligase [Clostridium difficile NAP07] gi|296258845|gb|EFH05737.1| serine--tRNA ligase [Clostridium difficile NAP08] gi|296431317|gb|EFH17136.1| serine--tRNA ligase [Clostridium difficile NAP07] Length = 423 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 184/426 (43%), Positives = 280/426 (65%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + + A+++R + + ++ LD++ R +++++E ++ + N+ S I Sbjct: 1 MLDIKRIRENLDCIKKAMERRGEKAFNLDEVVKLDDERRKILQEVEVMKNKLNTASKNIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 I EG + +K L +++ ++++ EV ++ L+ IPNVP VP G + Sbjct: 61 NLIKEGKDVENEKIK--LKDLSDKIKVIDQNLKEVEDKMEYLLMRIPNVPHPGVPQGETD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +RS G+ S+ H+EIG LG++DF+ A+K++G+RF++ G A LERAL Sbjct: 119 DDNVEVRSWGETTKFDFESKAHWEIGTELGILDFETASKITGSRFTLYKGLGARLERALL 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 F +D +T +GYTEV P + + GTGQ+PKF +DMF ++IPTSEV LTN Sbjct: 179 NFYLDTNTKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGLDYFMIPTSEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++++EI++ + LP+ +T P FRSEAGSAGRDTRG++RQHQF K E+V I E+S+ E Sbjct: 239 IHANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKIVAPEESYNE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRVV +CTGDLGF+A YD+EVW+ N Y EISSCS C + Sbjct: 299 LEKLTNNAETMLQLLNLPYRVVKICTGDLGFTASFKYDVEVWMPSYNRYVEISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R++ ++ HTLNGSG+A+GR + AILENY DGSV +P VLRPYM Sbjct: 359 FQARRAGIRFKRDKDSKAEYAHTLNGSGLAIGRSVAAILENYQQEDGSVIVPEVLRPYM- 417 Query: 419 NLAVIK 424 ++VIK Sbjct: 418 GVSVIK 423 >gi|289662416|ref|ZP_06483997.1| seryl-tRNA synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667711|ref|ZP_06488786.1| seryl-tRNA synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 426 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 209/427 (48%), Positives = 279/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ+P L L+ R + + SL+ + + L + ++++++RNS S IG Sbjct: 1 MLDPALLRQHPADLAERLRSTRSFSLDTAELESLESERKRLQVRTQELQSQRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A+G V AL E + ++L E + + L+ + +PN+P ++VP+G Sbjct: 61 HAKAKG--EDVAALMAEVAGFGDELKASEDALDAIRAKLEIIALGLPNLPADDVPLGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ G ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 SENVEQSRWGTPRQFDFEVKDHVELGAPHGWLDGETAAKLSGARFTVLRGPVARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 QFM+DLH EHGY E + PLLV ++M GTGQ+PKF DD+F T R+LIPTSEV L Sbjct: 179 QFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFQTEVGESRRYLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EI++++ LPLR T + FR+EAGS GRDTRGM+RQHQF K ELV+ EDS Sbjct: 239 TNIVRDEIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACAPEDSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L++L L YR V LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 AEHQRMTRCAELVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQNTYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P S + HTLNGSG AVGR +IA++ENY NADGS+ +P VLRPY Sbjct: 359 GDFQARRMQARWRNPVSGKPELLHTLNGSGTAVGRAMIAVMENYQNADGSIDVPQVLRPY 418 Query: 417 MNNLAVI 423 M + I Sbjct: 419 MGGIERI 425 >gi|116512562|ref|YP_811469.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|123025253|sp|Q02XG6|SYS_LACLS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116108216|gb|ABJ73356.1| seryl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 423 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 202/427 (47%), Positives = 278/427 (65%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R +E + E + LD K R LI K E ++A RNS S +I Sbjct: 1 MLDIKKIRADFDGIAAKLATRGVEKEKLEKLHDLDIKRRELIVKSEALKAERNSVSDEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + + ++ ++ E E+ +L ++I +PN+P E PIG Sbjct: 61 QVKRAKGDASTQ--IAAMQKVSAEIKAIDAELAEIEENLNEIIIMLPNLPHESTPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R VG+ P+ + H+++GE LG++D++R K++G+RF G A LERAL Sbjct: 119 DDNVEVRRVGQTPTFNFEPKAHWDLGEDLGILDWERGGKVTGSRFLFYKGAGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL--IPTSEVSLT 237 FM+D H + GYTE+ P +V E+M+GTGQ PKF +D F D R IPT+EV LT Sbjct: 179 NFMLDEH-GKEGYTEMITPYMVNQESMFGTGQYPKFKEDTFELKDDRGFVLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y EI++ LP++FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + + S+ Sbjct: 238 NYYRGEILDGSELPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPDQSYD 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+M + AE IL++L L YRVV+L TGD+GFSA KTYDLEVW+ QN YREISSCS C Sbjct: 298 ELEKMTANAENILQKLGLAYRVVALSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RYRD + K ++ HTLNGSG+AVGR + AILENY N DGS+T+P +LRPYM Sbjct: 358 DFQARRAQIRYRDEDGK-VQLLHTLNGSGLAVGRTVAAILENYQNEDGSITVPEILRPYM 416 Query: 418 NNLAVIK 424 L VIK Sbjct: 417 GGLEVIK 423 >gi|260890524|ref|ZP_05901787.1| hypothetical protein GCWU000323_01702 [Leptotrichia hofstadii F0254] gi|260859766|gb|EEX74266.1| serine--tRNA ligase [Leptotrichia hofstadii F0254] Length = 423 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 190/425 (44%), Positives = 274/425 (64%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML++++IR+N + + LK R+ + + +L DE R L++++E ++ RN +SA IG+ Sbjct: 1 MLEMRYIRENADKVREYLKNRNSDFDLDSLLKFDEDRRNLLQEVEMLKKERNESSALIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG L T+ ++ L+++ E+ +L IPN + P+G + Sbjct: 61 YKQEGKDP--AELLARMQTVSAKIKELDQKVAEIDEKQLELAYTIPNKLSDTTPVGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + H E+G LG++DF+R KL G+RF+V A LERAL Sbjct: 119 DNVEVRKWGTPREFDFEIKSHDELGVELGILDFERGAKLGGSRFTVYKNAAARLERALIA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FMID+HT EHG+ E+ P LVR E M GTGQ+PKFADD + D +LIPT+EV+LTNL Sbjct: 179 FMIDVHTGEHGFEEIFTPQLVRREMMVGTGQLPKFADDAYKIEGDEMYLIPTAEVTLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI++ + LP + FR EAGS GRD +G++RQHQF K E+V I + E S+ E Sbjct: 239 HNSEILDEEELPKYYCGYTACFRKEAGSGGRDLKGLIRQHQFNKVEMVKIVKPETSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M++CAE+IL++L+L YRV++LC+GD+GFSA KTYDLEVW+ Q YREISSCS +F Sbjct: 299 EKMVNCAEKILQKLELPYRVLALCSGDIGFSAAKTYDLEVWVPSQGKYREISSCSNTEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR +YR+ + F HTLNGSG+AVGR L+AI+ENY DG++ +P VL PYM Sbjct: 359 QARRAMIKYREKETGKSHFVHTLNGSGLAVGRTLLAIMENYQQDDGTIKVPEVLVPYMGG 418 Query: 420 LAVIK 424 + VIK Sbjct: 419 MTVIK 423 >gi|24380240|ref|NP_722195.1| seryl-tRNA synthetase [Streptococcus mutans UA159] gi|30173154|sp|Q8DSB7|SYS_STRMU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|24378250|gb|AAN59501.1|AE015015_1 putative seryl-tRNA synthetase [Streptococcus mutans UA159] Length = 426 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 203/428 (47%), Positives = 279/428 (65%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L +R ++ + + LD K R L+ K E+ +A RN+ SA I Sbjct: 1 MLDIKRIRNDFDQIAEKLARRGVDEKTLHDLKELDFKRRQLLIKSEEAKAERNTASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + L ++ L+ + E+ LK + +PN+P ++VP+G Sbjct: 61 QAKR--NQEDASEQIADMQKLSAEIKALDAQLVEIDGQLKTFTTTLPNIPADDVPLGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R GK + H+++GE L ++D++R +K++G+RF G A LERA+ Sbjct: 119 DENVEMRRWGKPRQFDFDIKAHWDLGEDLDILDWERGSKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADNDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + EDS+ E Sbjct: 238 YYRGEIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEDSYNE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLELPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY NADGSVTIP VLRPY+ Sbjct: 358 FQARRAQIRYRDEVDGKVKLLHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLRPYIG 417 Query: 419 NLAVIKKE 426 + VI + Sbjct: 418 GVQVISPQ 425 >gi|218290707|ref|ZP_03494789.1| seryl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218239245|gb|EED06444.1| seryl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 426 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 179/427 (41%), Positives = 260/427 (60%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQ P+ LK++ ++P + + +L D + R + ++E ++A RN S I Sbjct: 1 MLDIRAIRQQPDVFKAKLKRKKVDPAEIDRLLEADARWRDHLAEVERLKALRNQTSEAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +G + +++ L++E E+ ++ L+ +PNVP + VP G S Sbjct: 61 RKKRQG--EDASEDIARMRQVSDRIQALDEEVRELERQVRDLLLALPNVPHDSVPDGESE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N +I++ G P + H+EI EAL ++D +RA K++G+RF + G A LERAL Sbjct: 119 DDNPVIKTWGDLPKFSFEPKPHWEIAEALDIVDSERAVKITGSRFVLYKGLGARLERALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FM+D H HGYTE+ + +E++ GTG +PKF D+MF +LIPT+EV LTN Sbjct: 179 NFMLDFHVERHGYTEMFPAFIANEESLIGTGNLPKFGDEMFKIEGLPYYLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+ + LP++F + FRSEAGSAG+DTRG++R HQF K ELV++ E S+ Sbjct: 239 YYRDEILSADQLPVKFAGYSACFRSEAGSAGKDTRGLIRLHQFQKVELVNLCLPEQSYEV 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE +L+ L L YR + +CTGDLG K YD+EVWL QN YREISSC+ + Sbjct: 299 LEQLTREAEAVLEALQLPYRRIEICTGDLGAKDAKKYDIEVWLPAQNRYREISSCTNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR N R+R +F HTLNGSG+A+GR + AILENY DGSV IP L PYM Sbjct: 359 YQARRANLRFRREERGKPEFVHTLNGSGLAIGRTVAAILENYQQEDGSVLIPRALVPYMG 418 Query: 419 NLAVIKK 425 + I K Sbjct: 419 GIERIAK 425 >gi|82749786|ref|YP_415527.1| seryl-tRNA synthetase [Staphylococcus aureus RF122] gi|123548272|sp|Q2YUR2|SYS_STAAB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|82655317|emb|CAI79697.1| seryl-tRNA synthetase [Staphylococcus aureus RF122] Length = 428 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 197/427 (46%), Positives = 268/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P+ + ++ R +P+ + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLIIATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENDDDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCMD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|312114334|ref|YP_004011930.1| seryl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311219463|gb|ADP70831.1| seryl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 461 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 239/459 (52%), Positives = 306/459 (66%), Gaps = 36/459 (7%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++WIR+NP D L +R EP S +L+LDE+ R K ++D++ARRN+ S +IG+ Sbjct: 1 MLDLKWIRENPADFDQGLARRGTEPLSSKVLALDEELRAHKKALQDLQARRNAASKEIGK 60 Query: 61 AIAEG-NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV--PLEEVPIGT 117 A +G + + +AL E + LK + E +E E+ +++ L++ IPN+ P EVP G Sbjct: 61 AKGKGGDPAKAEALMAEVADLKGAIAAGEAKERELDAAITALLAGIPNMLLPAPEVPDGK 120 Query: 118 SANENILIRSVGKKPSA---IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 +EN+ +R VG ++HFE+GEALGLMDF+ A K+SGARF+VL G LA L Sbjct: 121 DESENVELRRVGTPRDFAAEDFAPKQHFELGEALGLMDFEAAAKISGARFTVLKGKLARL 180 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------ 222 ERALGQFM+D+ TSEHGYTEV+ PLLVRD A+YGT Q+PKF DD++ T Sbjct: 181 ERALGQFMLDVQTSEHGYTEVNPPLLVRDRALYGTAQLPKFEDDLYKTAGTTSLGDAVGA 240 Query: 223 ------------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 + WLIPT+EV LTNL I+ LPLRFT L P FR+E Sbjct: 241 FADEVDVRRNEKTGRQEAFELYWLIPTAEVPLTNLVRESILPEADLPLRFTALTPCFRAE 300 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 AG+AGRDTRGM+RQHQF+K E+VSIT + S EHERM SCAEEILKRL L YRVV LC Sbjct: 301 AGAAGRDTRGMIRQHQFYKVEMVSITTPDASAAEHERMTSCAEEILKRLGLPYRVVVLCA 360 Query: 325 GDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNG 384 GD GF A KT+D+EVWL GQ YREISS S CG+FQ+RRM +R+R +K L+F HTLNG Sbjct: 361 GDTGFGARKTHDIEVWLPGQGAYREISSVSNCGDFQARRMQARFRPSAAKDLQFVHTLNG 420 Query: 385 SGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 SG+AVGR LIA++ENY ADGS+ +P L PYM + I Sbjct: 421 SGLAVGRALIAVIENYQEADGSIRVPDALLPYMGGVTRI 459 >gi|326802688|ref|YP_004320506.1| serine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] gi|326651068|gb|AEA01251.1| serine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] Length = 432 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 271/431 (62%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R N + + ALK R +E + E++ LD+K R +I + E+++ RN S IG Sbjct: 1 MIDVRLLRDNFDQVAEALKGRGVEKETLEHLRDLDQKRRQVIVEAENLKKERNIASDAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D E L ++ L+ + ++ +++ IPN+P E VP+G Sbjct: 61 QLKR--NKENADDKIQEMKALGTKIKALDSDLDQLDQEEHDILARIPNLPAEGVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ I G+ P + H+++ E L ++D+D K+SG+RF G A LERAL Sbjct: 119 DENVEIHRHGETPEFNFELKAHWDLAEDLDILDWDAGAKVSGSRFVYYKGLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 FM+D H + GY E+ P LV D+AMYGTGQ PKF +D++ T LIPT+EV L Sbjct: 179 NFMLDQH-QKEGYMEMITPFLVNDQAMYGTGQFPKFTEDVYQITNEGQDLTLIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN ++ EI++ + LP+R T L+P FRSEAGSAGRDTRG++R HQF K E+V + + SF Sbjct: 238 TNYFAKEILKEEDLPIRVTALSPCFRSEAGSAGRDTRGLIRMHQFQKVEMVKVATPDQSF 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E M AE IL L L YR + LCTGD+GFSA KTYD+EVW+ QN YREISSCS C Sbjct: 298 DELEAMTKNAENILDLLGLPYRRIILCTGDMGFSAAKTYDIEVWMPAQNTYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD + K + HTLNGSG+AVGR + A+LEN NADGS+TIP VL PY Sbjct: 358 VDFQARRAQVRYRDIDGK-TQLAHTLNGSGLAVGRTVAAVLENGQNADGSITIPEVLVPY 416 Query: 417 MNNLAVIKKEH 427 M + I KE+ Sbjct: 417 MGGVDKITKEN 427 >gi|163846039|ref|YP_001634083.1| seryl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222523768|ref|YP_002568238.1| seryl-tRNA synthetase [Chloroflexus sp. Y-400-fl] gi|189083562|sp|A9WE34|SYS_CHLAA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783017|sp|B9LIV1|SYS_CHLSY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|163667328|gb|ABY33694.1| seryl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222447647|gb|ACM51913.1| seryl-tRNA synthetase [Chloroflexus sp. Y-400-fl] Length = 423 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 172/427 (40%), Positives = 258/427 (60%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+ P+ + L + ++ + +L+ DE+ R LI ++E +A RN+ S QIG Sbjct: 1 MLDIKLIREQPDEVKRRLARCGVDGAVVDQVLAFDEQRRRLIYEVETRKAERNTVSKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + A + L +++ L+++ EV + ++ I N+P +VP G Sbjct: 61 AMK---DPAERQAKIDAMRQLGDEIAALDRQLAEVEEQQRAVMLEIRNLPHPDVPDGVDD 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N++I G++ +R H+E+GEALG++DF+R KL+G+RF V+ G A L+RA+ Sbjct: 118 RDNVVIYQEGEERQLPFPARPHWELGEALGIIDFERGVKLAGSRFYVMRGAGARLQRAVI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q++IDLH + GY EV P +V++ ++ +GQ+PKF D+++ G WL+PT+EV LT+ Sbjct: 178 QWLIDLHLEQ-GYQEVYTPFVVKESVLWASGQLPKFRDNLYRDEESGLWLVPTAEVPLTS 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY+ EI+++ LP+ P FR E SAGRD RG+ R HQF K E+ + S+ Sbjct: 237 LYADEILDASQLPIYHVAYTPCFRKEQLSAGRDVRGIKRGHQFDKVEMYMFVTPDQSYQA 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE +RL L +R LCTGDLGF + KTYD+EVW G + E+SSCS Sbjct: 297 LEKLRRDAEECARRLGLPFRTKLLCTGDLGFGSTKTYDIEVWAPGVGEWLEVSSCSNVEA 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR +F HTLNGSG+ + R +IAI+ENY DGS+ IP VLRPYM Sbjct: 357 FQARRANLRYRPEPGAKPEFLHTLNGSGLGLPRTIIAIMENYQQEDGSILIPEVLRPYMG 416 Query: 419 NLAVIKK 425 + I Sbjct: 417 GMERIGP 423 >gi|290579784|ref|YP_003484176.1| putative seryl-tRNA synthetase [Streptococcus mutans NN2025] gi|254996683|dbj|BAH87284.1| putative seryl-tRNA synthetase [Streptococcus mutans NN2025] Length = 426 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 203/428 (47%), Positives = 278/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L +R ++ + + LD K R L+ K E+ +A RN+ SA I Sbjct: 1 MLDIKRIRNDFDQIAEKLARRGVDEKTLHDLKELDFKRRQLLIKSEEAKAERNTASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N L ++ L+ + E+ LK + +PN+P ++VP+G Sbjct: 61 QAKR--NQEDASEQIAAMQKLSAEIKALDAQLVEIDGQLKTFTTTLPNIPADDVPLGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R GK + H+++GE L ++D++R +K++G+RF G A LERA+ Sbjct: 119 DENVEMRRWGKPRQFDFDIKAHWDLGEDLDILDWERGSKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADNDYVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + EDS+ E Sbjct: 238 YYRGEIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEDSYNE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLELPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY NADGSVTIP VLRPY+ Sbjct: 358 FQARRAQIRYRDEVDGKVKLLHTLNGSGLAVGRTVAAILENYQNADGSVTIPEVLRPYIG 417 Query: 419 NLAVIKKE 426 + VI + Sbjct: 418 GVQVISPQ 425 >gi|254293766|ref|YP_003059789.1| seryl-tRNA synthetase [Hirschia baltica ATCC 49814] gi|254042297|gb|ACT59092.1| seryl-tRNA synthetase [Hirschia baltica ATCC 49814] Length = 437 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 211/437 (48%), Positives = 284/437 (64%), Gaps = 13/437 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M DI+ IR NP+ +R L IL+LDE+ R +++I+D RN +S I Sbjct: 1 MHDIRAIRDNPDAYINGWNRRKSGLGDVVSDILALDEQLRAAVQQIQDAEQIRNKSSKLI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+A A GN L E + K + + + E +V + L ++ +PN+ ++VP G Sbjct: 61 GKAKATGNEDEAQRLMAEVADAKATMEKIGETESDVRAKLDAILLGLPNIVYDDVPDGED 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGL------MDFDRATKLSGARFSVLTGHLA 172 ++N +R G+ ++EH ++GE L MDF+ A K+SGARF L G +A Sbjct: 121 EDDNTEVRVWGEPNKLAFTAQEHADLGEKLKDEKGFALMDFEAAAKISGARFVALRGKMA 180 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 LERAL QFM+D+ T EHGY EVS P LVRD+A+ GTGQ+PKF +D+F TT+ + IPT+ Sbjct: 181 KLERALTQFMLDVQTDEHGYQEVSPPFLVRDDALVGTGQLPKFEEDLFKTTNDFYTIPTA 240 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL +I+ LP+R T P FRSEAGSAGRDT+GM+R HQF K E+VSIT+ Sbjct: 241 EVPVTNLVREQILAEDQLPIRMTAATPCFRSEAGSAGRDTKGMIRLHQFTKVEMVSITKP 300 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S E ERM CAE IL++L+L YRVV+LCTGD+GF A +TYD+EVWL Q+ YREISS Sbjct: 301 EESDAELERMTGCAEAILQKLELPYRVVNLCTGDIGFGAKRTYDIEVWLPSQDTYREISS 360 Query: 353 CSTCGNFQSRRMNSRYR-----DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 CSTCG+FQ+RRMN+R++ D +F HTLNGSG+AVGR L+A+LENY DGS+ Sbjct: 361 CSTCGDFQARRMNTRFKPAPTEDNKKPKTQFVHTLNGSGLAVGRTLVAVLENYQQEDGSI 420 Query: 408 TIPTVLRPYMNNLAVIK 424 +P L PYM + VIK Sbjct: 421 KVPAALVPYMGGVEVIK 437 >gi|257899256|ref|ZP_05678909.1| seryl-tRNA synthetase [Enterococcus faecium Com15] gi|257837168|gb|EEV62242.1| seryl-tRNA synthetase [Enterococcus faecium Com15] Length = 423 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 202/426 (47%), Positives = 275/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQN E + L R ++ + + LDE R L+ K E+++ RN SA+I Sbjct: 1 MLDVKMMRQNIEEVQEKLMTRGVKKETLAEFMELDENRRKLLVKSEELKKYRNDVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q A E + + L+ E EV LK++ + +PN+P + VP+G+ Sbjct: 61 QLKRA--KEDASAKIAEMKEVGGNIKALDTEIAEVDEKLKQIATTLPNLPHDSVPVGSDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR + + + H+EI E L ++DF+R K++G+RF G A LERA+ Sbjct: 119 EDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI++ LP+ FT L+P+FRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNDEILDGADLPVYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+ILK+L L YRV++L TGD+GFSA KTYDLEVW+ Q+ YREISSCS C + Sbjct: 299 LEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD + K + + HTLNGSG+AVGR + AILENY N DGSVT+P L PYM Sbjct: 359 FQARRAMIRYRDNDGK-IHYAHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEALVPYMG 417 Query: 419 NLAVIK 424 NL VIK Sbjct: 418 NLKVIK 423 >gi|86749859|ref|YP_486355.1| seryl-tRNA synthetase [Rhodopseudomonas palustris HaA2] gi|123004117|sp|Q2IWG6|SYS_RHOP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|86572887|gb|ABD07444.1| seryl-tRNA synthetase [Rhodopseudomonas palustris HaA2] Length = 476 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 237/477 (49%), Positives = 301/477 (63%), Gaps = 53/477 (11%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP+ D A +R L P ++ ++ LDE R I + E +ARRN+ S +IG Sbjct: 1 MHDIKAIRDNPQAFDAAFTRRGLAPIADSLIKLDETRRAAILESEKAQARRNAASKEIGD 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + DAL E + LK +P LE E +LKK +S IPN+PL+EVP G + Sbjct: 61 AKKAKDNARADALMAEVAELKTTMPALEAAVKEADEALKKALSEIPNLPLDEVPEGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ G K + H+++GEALG+MDF+ A K+SGARF VL LA LERA+GQ Sbjct: 121 GNVDHHRFGAKRDYAFTPKAHYDLGEALGMMDFEAAAKISGARFVVLKKGLARLERAIGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------------ 222 F +D+HT EHGYTEV+ PLLVRD+AM+GT Q+PKF +D F T Sbjct: 181 FFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFREDQFQTVTEEVRRRTIVEFVSSAM 240 Query: 223 -------------------------------TDGRWLIPTSEVSLTNLYSHEIIESKSLP 251 + WLIPT+EVSLTNL I++ K LP Sbjct: 241 KLGASATDAGGSEFARQLANEELVDFSYAKMPERFWLIPTAEVSLTNLVRESILDEKELP 300 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 +R T L P FR+EAG+AGRDTRGM+RQHQF K ELVSIT E S EHERMLSCAEE+L+ Sbjct: 301 MRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEQSKDEHERMLSCAEEVLR 360 Query: 312 RLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCSTCGNFQSRRMNSRY 368 RL LHYRV++LCTGD+GF++ KTYD+EVW+ GQ YREISSCS CG+FQ+RRM++R Sbjct: 361 RLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREISSCSVCGDFQARRMDARS 420 Query: 369 RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 R P+ K +F HTLNGSG AVGR LIA++ENY DGS+ +P L+PYM L VI K Sbjct: 421 RGPDGK-PRFVHTLNGSGTAVGRALIAVIENYQQEDGSIAVPDALQPYMGGLKVIAK 476 >gi|258543173|ref|YP_003188606.1| seryl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256634251|dbj|BAI00227.1| seryl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256637311|dbj|BAI03280.1| seryl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256640363|dbj|BAI06325.1| seryl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256643420|dbj|BAI09375.1| seryl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256646475|dbj|BAI12423.1| seryl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256649528|dbj|BAI15469.1| seryl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256652514|dbj|BAI18448.1| seryl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655572|dbj|BAI21499.1| seryl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 422 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 212/423 (50%), Positives = 282/423 (66%), Gaps = 2/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ +R +P D L +R +EP S +L+ DE+ R +++ + RR + + +IG Sbjct: 1 MHDIRALRADPAAFDADLARRGVEPVSAKLLAWDEERRQAQTVLQEKQGRRKALAREIGT 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G S L+ E L+ ++ LE++ + + L++ +PN VP G + Sbjct: 61 LKRNGGDS--SDLEAEGLALRAEMEALEEQVNVLGRESTALLANLPNRLDATVPEGPDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++ G KP+ ++HFE+GE L MDF A KLSG+RF VL G +A L RALGQ Sbjct: 119 ANVVQHEWGTKPTFTFTPKQHFELGETLKQMDFATAAKLSGSRFVVLRGGIARLARALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH +EHGYTE P++V D+AMYGT ++PKFAD F T DGRWLIPT+EV LT Sbjct: 179 FMLDLHVTEHGYTETQVPVMVNDDAMYGTDKLPKFADQSFRTEDGRWLIPTAEVPLTASV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S +I+E+ +LPLR T L+ FRSEAG+AGRD RGMLRQHQF K E+VS+T E+S EHE Sbjct: 239 SGDILEASALPLRMTALSQCFRSEAGAAGRDVRGMLRQHQFEKVEMVSVTTPEESDAEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE++L++L++ YR V LC GD GF A KT+DLE WL GQ+ +REISSCS +FQ Sbjct: 299 RMTRCAEKVLEKLNIPYRRVLLCAGDTGFGAAKTFDLEAWLPGQDAWREISSCSNTRDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + F HTLNGSG+AVGR LIA++ENY N DGSVT+P VLRPYM + Sbjct: 359 ARRMNARYRPQAGAAPAFVHTLNGSGLAVGRTLIAVMENYQNEDGSVTVPDVLRPYMGGI 418 Query: 421 AVI 423 I Sbjct: 419 EKI 421 >gi|99080835|ref|YP_612989.1| seryl-tRNA synthetase [Ruegeria sp. TM1040] gi|123077692|sp|Q1GHY9|SYS_SILST RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|99037115|gb|ABF63727.1| seryl-tRNA synthetase [Ruegeria sp. TM1040] Length = 430 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 207/429 (48%), Positives = 282/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R S +L LDE R I E +A +N + IG Sbjct: 1 MHDIRAIRENPAAFDAALARRGDSALSSQVLELDEARRAKILAAETAQADQNKAAKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ E + K ++ ++ E E+ + L +++ IPN P E+VP G + Sbjct: 61 AKAKGDEAEFERLRAEVADKKAEVAAMQAEAKELDAKLTDMLARIPNSPAEDVPDGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G P+ +EHFEI MDF+ A K+SG+RF VL G +A + RAL Q Sbjct: 121 DNVEVKRWGDVPAFDFDPKEHFEIAGVAKAMDFETAAKISGSRFVVLKGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G TEV++P+LVRDEAMYGT ++PKF +D + TT+G WL+PTSEV LT Sbjct: 181 FMVDTHVDENGLTEVNSPVLVRDEAMYGTDKLPKFGEDSYQTTNGWWLVPTSEVPLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + ++I+ +LP+R+T FRSEAGSAG+DT GMLRQHQF K E+VSI E S E + Sbjct: 241 AGDVIDEAALPIRYTAHTLCFRSEAGSAGKDTSGMLRQHQFEKVEMVSIVHPETSDEEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE IL++L + YR V LCTGD+GF A +TYD+E W+ GQN YREISS ST G+FQ Sbjct: 301 RMLGCAEGILEKLGIPYRTVVLCTGDMGFGARRTYDIEAWVPGQNTYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + +F HTLNGSG+AVGRCLIA+LEN ADGSV +P L PY+ Sbjct: 361 ARRMNARFKPADGGKPEFLHTLNGSGLAVGRCLIAVLENGQQADGSVKLPDALAPYLGGK 420 Query: 421 AVIKKEHIL 429 + E L Sbjct: 421 LTLTAEGQL 429 >gi|49484921|ref|YP_042142.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|56749400|sp|Q6GD81|SYS_STAAS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|49243364|emb|CAG41781.1| seryl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] Length = 428 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 196/427 (45%), Positives = 266/427 (62%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R P + ++ R + + + IL LDE+ R LI E+++ARRN S +I Sbjct: 1 MLDIRLFRNEPVTVKSKIELRGDDSKVVDEILELDEQRRKLISATEEMKARRNKVSEEI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + N D + E TL + + + + +E+ + + ++ IPN+ ++VP G S Sbjct: 60 -ALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILCRIPNLISDDVPQGESD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + H++I E L + DFDRA K+SGARF LT A LERAL Sbjct: 119 EDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARFVYLTNEGAQLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F + IPT+EV LTN Sbjct: 179 NYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EII+ LP +FT + FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 239 FYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQPEDSWNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE IL+ L L YR V LCTGD+GFSA KTYDLEVWL N Y+EISSCS C + Sbjct: 299 LEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + HTLNGSG+AVGR AI+ENY N DG+VTIP L P+M Sbjct: 359 FQARRANIRFKRDKAAKPELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMG 418 Query: 419 NLAVIKK 425 I K Sbjct: 419 GKTQISK 425 >gi|257094687|ref|YP_003168328.1| seryl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047211|gb|ACV36399.1| seryl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 427 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 200/429 (46%), Positives = 268/429 (62%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + + L R L L+ + + L + +D++A RNS S +IG Sbjct: 1 MLDIQLLRTNIDAVAERLATRGFALDRSTFLKLESERKALQTRTQDLQASRNSLSKEIGL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A + S LK++L E E+ ++ +PN+P + VPIG S Sbjct: 61 LKA--RAQDASAGMAQVSALKDELAANEVRLGELLREFDAFLAVVPNLPQDSVPIGRSEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G R+H ++GEALG +DF A K++G RFS++ G LA L R L Q Sbjct: 119 DNVEVKRWGDPRRFEFTVRDHVDLGEALGQLDFATAAKIAGTRFSLMKGQLARLHRVLAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSL 236 FM+D H +HGYTEV AP LV ++ GTGQ+PKF +D+F + +LIPT+EV + Sbjct: 179 FMLDTHVGQHGYTEVYAPYLVNGASLLGTGQLPKFEEDLFKILRADAEPLYLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EI+ +++LPL+ P FRSEAGS GRDTRGM+RQHQF K ELV I EDS Sbjct: 239 TNIVRGEILPAEALPLKLVCHTPCFRSEAGSYGRDTRGMIRQHQFDKVELVQIVAAEDSI 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE + + AE IL+ LDL YR V+L TGD+GFS+ KTYDLEVWL QN YREISSCS Sbjct: 299 AAHEELTAHAERILELLDLPYRRVALSTGDMGFSSAKTYDLEVWLPAQNAYREISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RRM +RYR+ +K + HTLNGSG+AVGR L+A++EN+ NADGS+ IP VLR Y Sbjct: 359 EAFQARRMQARYRNERNK-TELVHTLNGSGLAVGRTLVAVMENFQNADGSICIPPVLRSY 417 Query: 417 MNNLAVIKK 425 + L I K Sbjct: 418 LGGLETIGK 426 >gi|219666079|ref|YP_002456514.1| seryl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|254783022|sp|B8FXX3|SYS_DESHD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|219536339|gb|ACL18078.1| seryl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 421 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 191/424 (45%), Positives = 268/424 (63%), Gaps = 5/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R NPE + ALKKR+ + L +E+ R L+ ++E ++A+RN+ S ++G+ Sbjct: 1 MLDLKFVRTNPEVVKEALKKRNSNVSLDAFLEQEEERRKLLFEVESLKAQRNTVSEEVGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + L E + +++ LE + E+ S++ ++ IPN+P E VP+G Sbjct: 61 RKKHG--EDAEQLILEMREVGQKVKNLEDKLGEIEQSMEAVLYEIPNIPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R+ G S H+EIGE L ++DF RA K++GARF+ G A LERAL Sbjct: 119 ANVEVRTWGTPRSFDFEPLAHYEIGEKLDILDFARAGKVTGARFTFYKGLGAKLERALIS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+D H S GY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN+ Sbjct: 179 FMLDRH-SAKGYVEVLPPYMVHRNSMIGTGQLPKFEEDAFKVAGTDYFLIPTAEVPVTNM 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+E++ LP+ + FR+EAGSAGRDTRG++RQHQF K ELV E+S+ E Sbjct: 238 YREEILEAEQLPIHHCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFAFPENSYEEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AE IL+ L+L YRV++L TGDLGF++ KTYDLEVWL N YREISSCS +F Sbjct: 298 ESLTRDAESILQELELPYRVMALSTGDLGFTSAKTYDLEVWLPSFNTYREISSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSG+A+GR + AILENY ADG V +P L+PYM Sbjct: 358 QARRANIRFRRAPKAKPEFLHTLNGSGLAIGRTVSAILENYQEADGRVRVPKALQPYM-G 416 Query: 420 LAVI 423 + I Sbjct: 417 VEYI 420 >gi|150020158|ref|YP_001305512.1| seryl-tRNA synthetase [Thermosipho melanesiensis BI429] gi|166223305|sp|A6LJM6|SYS_THEM4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|149792679|gb|ABR30127.1| seryl-tRNA synthetase [Thermosipho melanesiensis BI429] Length = 425 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 199/425 (46%), Positives = 284/425 (66%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ +R+ PE AL+KR ++ + + IL LD + R ++ ++ +++A+RN S + Sbjct: 1 MIDIKLLRKEPEIFYNALEKRAMDKEIIDRILVLDREWRSILAEVNNLKAKRNELSKMVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + AE + L E+ + E++ L++ + + +K L IPN+P E VP+G Sbjct: 61 KLKAEKKDIEAEELIKESKGIGEKIKKLDERQKRLEEEMKNLALEIPNIPHESVPVGKDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G + H+++G LGL+DF+RA KLSGARF+V+ G LA LERAL Sbjct: 121 TENVEVRKWGTPRKFDFEPKAHWDLGPELGLIDFERAAKLSGARFTVMYGLLAKLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 QFM+D+HT EHGYTEV P LVR E M TG++PKF D+ + T D +LIPT+EV +T Sbjct: 181 QFMLDVHTKEHGYTEVWVPHLVRREVMIWTGKLPKFEDESYNTKKDDLFLIPTAEVPITA 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L++ EI++ K LP ++ + +R EAGS G+D RGM+RQHQF K ELV T+EE+SF Sbjct: 241 LHAEEILKEKELPKKYVSYTSCYRREAGSYGKDVRGMIRQHQFDKVELVWFTKEEESFNA 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+ L+L YRVV+LCTGDLGF++ KTYD+EVWL N Y+E+SSCS + Sbjct: 301 LEQLTRDAERILQLLELPYRVVNLCTGDLGFASAKTYDIEVWLPSYNDYKEVSSCSNITD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N +YR ++K F HTLNGSG+A+GR L+AI+ENY N DG++TIP VL PYM Sbjct: 361 FQARRANIKYRGSDNK-THFVHTLNGSGLAIGRTLVAIMENYQNEDGTITIPKVLVPYM- 418 Query: 419 NLAVI 423 + I Sbjct: 419 GVEKI 423 >gi|188997109|ref|YP_001931360.1| seryl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|229560100|sp|B2VA33|SYS_SULSY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|188932176|gb|ACD66806.1| seryl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 417 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 198/420 (47%), Positives = 277/420 (65%), Gaps = 6/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+DI+ +R+NP+ + LK R + +L +DE+ R +IK+IE +RA RN S Sbjct: 1 MIDIKLLRENPDFVKERLKTRDESYLKLIDRLLEIDEERRKIIKEIESLRAERNEKSKLF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 EG + ++ + E + LE + E+ + ++ IPN+P +VPIG Sbjct: 61 PILKKEGKDT--TEIQQRVKQIGEIIKNLEDKLQEIENEFNNILYYIPNLPAPDVPIGKD 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+N+ IR GK H+EIGE LG++DF+R KLSG+RF+V+ A LERAL Sbjct: 119 ENDNVEIRRWGKPRKFDFEPLSHYEIGERLGILDFERGAKLSGSRFTVMFKEAARLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 FM+D+HT +HGYTEV P LV+ E ++GTGQ+PKF DD++ + +LIPT+EV+LT Sbjct: 179 INFMLDVHTKQHGYTEVWTPALVKPEILFGTGQLPKFKDDLYKIEDEDLYLIPTAEVTLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL++ EI+ + LP +T P FR EAGS G+D +G+LRQHQF K ELV I + EDS+ Sbjct: 239 NLHADEILNEEDLPKYYTAYTPCFRKEAGSHGKDVKGILRQHQFDKVELVKIVKPEDSYN 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E++++ AE+IL+ L++ YRVV LCTGD+GFSA KTYD+EVW+ QN YREISSCS Sbjct: 299 ELEKLVNEAEKILQLLEIPYRVVLLCTGDMGFSAAKTYDIEVWIPSQNRYREISSCSNTE 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RY+D + K+ + HTLNGSG+AVGR LIAI+ENY DG+ IP VL+ Y+ Sbjct: 359 DFQARRAKIRYKDKDGKN-HYVHTLNGSGLAVGRTLIAIMENYQKPDGTFEIPKVLKDYL 417 >gi|295398161|ref|ZP_06808210.1| serine--tRNA ligase [Aerococcus viridans ATCC 11563] gi|294973680|gb|EFG49458.1| serine--tRNA ligase [Aerococcus viridans ATCC 11563] Length = 435 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 201/431 (46%), Positives = 279/431 (64%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ +R N + R + E ++ LD + R +I + E ++A RN+ S +IG Sbjct: 1 MIDIKLLRDNFDATAEKYASRGVAKDELEKLIDLDGQRREVISQTETLKAERNAVSDEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + E++ +L+K ++ + ++ +PN+P + VP+G Sbjct: 61 LLRR--NKENADDKIARMKEVGEEILVLDKRLAKLDEQVTYIMDRLPNLPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +R + P + H+EIGEALG++DF+R K+SGARF G A LERA+ Sbjct: 119 DDNVEVRRWSQAPEFDFQPKAHYEIGEALGILDFERGAKVSGARFLYYRGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSL 236 FM+D H E GY E+ P LV + AMYGTGQ PKF +D+F TT+ LIPT+EV L Sbjct: 179 NFMLDQH-QEEGYEEIIPPYLVNENAMYGTGQFPKFTEDVFSTTNEDRHLTLIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN +++EII ++LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V R EDS+ Sbjct: 238 TNYFANEIIPGENLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFQKVEMVKFARPEDSY 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E+M++ AE IL++L+L YRV++L TGD+GFSA KTYDLEVW+ Q YREISSCS Sbjct: 298 DELEKMVANAENILQKLNLPYRVMTLSTGDMGFSAAKTYDLEVWVPAQETYREISSCSNT 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR R+R+ N K ++ HTLNGSG+AVGR + AILENY NADGSVTIP L PY Sbjct: 358 EAFQARRALIRFRNANGK-PEYVHTLNGSGLAVGRTVTAILENYQNADGSVTIPEALVPY 416 Query: 417 MNNLAVIKKEH 427 M + I KE+ Sbjct: 417 MGGIKEITKEN 427 >gi|148255774|ref|YP_001240359.1| seryl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gi|166200604|sp|A5EJV9|SYS_BRASB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|146407947|gb|ABQ36453.1| seryl-tRNA synthetase [Bradyrhizobium sp. BTAi1] Length = 442 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 237/443 (53%), Positives = 304/443 (68%), Gaps = 19/443 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP+ D AL +R L PQS ++L++DE+ R I E +ARRN+ S +IG+ Sbjct: 1 MHDIKSIRDNPQGFDAALTRRGLSPQSSHLLAIDERRRAAILASEQAQARRNAASKEIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + AL E + LK +P LE + L + +S IPN+PL+EVP G + Sbjct: 61 AKKAKDDARASALMEEVAKLKTTMPELEAAAKQADEELARELSAIPNLPLDEVPDGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ G + + R H EIG ALG MDF+ A KLSGARF VL LA LERA+GQ Sbjct: 121 DNVERHVFGARRNYAFAPRPHDEIGAALG-MDFESAAKLSGARFVVLKKGLARLERAIGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--------------TTDGR 226 FM+DLHT+EHGYTE++ PLLVR++ M+GTGQ+PKF DD F T+ Sbjct: 180 FMLDLHTTEHGYTEINPPLLVRNDVMFGTGQLPKFEDDQFWAVRGELLIAPDERLKTERL 239 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 LIPT+EV+LTNL I++ K LP+R T L P FR+EAG+AGRDTRGM+RQHQF K EL Sbjct: 240 GLIPTAEVALTNLVRESIVDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVEL 299 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ-- 344 VSIT E S EHERML+CAEE+L+RLDLHYRV++LCTGD+GFS+ KTYD+EVW+ GQ Sbjct: 300 VSITTPETSKDEHERMLACAEEVLRRLDLHYRVITLCTGDMGFSSQKTYDIEVWMPGQGD 359 Query: 345 -NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 +REISSCS CG+FQ+RRM++RYR + K +F HTLNGSG AVGR LIA++E Y A Sbjct: 360 GGAFREISSCSVCGDFQARRMDARYRASDGK-PRFVHTLNGSGTAVGRALIAVMETYQQA 418 Query: 404 DGSVTIPTVLRPYMNNLAVIKKE 426 DGS+ +P VL+PYM L V+ E Sbjct: 419 DGSIAVPDVLQPYMGGLKVVAAE 441 >gi|94270597|ref|ZP_01291778.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|93450746|gb|EAT01810.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] Length = 424 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 195/419 (46%), Positives = 268/419 (63%), Gaps = 2/419 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML++++IR+N + +R+L+ + LD + R L+ ++E+ R R S +IG Sbjct: 1 MLELRFIRENFALVREKTARRNLDTTALDQFPELDRRRRELLTELEEGRNHRKKVSQEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 EG+ + ET L E+L LE++ V L++++ IPN+ + VP G Sbjct: 61 ALKKEGDEAAASRRMEETRQLGERLKELEEQLAVVDGQLEEIVMAIPNLCEDSVPAGGDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ R G P ++ H+E+GEA G +DF RA KL+G+RF++LTG A LERAL Sbjct: 121 ADNVEYRRWGAPPEFDFPAKAHWELGEADGSLDFTRAAKLAGSRFALLTGFAARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+DLHT +HGYTEV P LV +M TGQ+PKFA+D+F WLIPT+EV +TN Sbjct: 181 SFMLDLHTEKHGYTEVLPPFLVNSASMTATGQLPKFAEDLFRIEGADLWLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ E + K LP+ + P FRSEAGS GRDT+G++RQHQF K ELV T E S E Sbjct: 241 IHRDETLAEKELPIYYCAYTPCFRSEAGSYGRDTKGLIRQHQFDKVELVKFTTPETSDAE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++LS AE++L+ L+L +RVV+LC+GDLGFSA KTYD+EVW+ QN YREISSCS G+ Sbjct: 301 LEKLLSDAEKVLQLLELPHRVVTLCSGDLGFSARKTYDIEVWMPAQNCYREISSCSNFGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RYR + HTLNGSG+AVGR L AI EN+ ADG++ PT L PY+ Sbjct: 361 FQARRGGIRYRPAGQQKSALVHTLNGSGLAVGRTLAAIYENHQQADGTIKPPTALAPYL 419 >gi|282164416|ref|YP_003356801.1| seryl-tRNA synthetase [Methanocella paludicola SANAE] gi|282156730|dbj|BAI61818.1| seryl-tRNA synthetase [Methanocella paludicola SANAE] Length = 421 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 196/426 (46%), Positives = 276/426 (64%), Gaps = 8/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+++++R NPE + AL KRH + + +L D+ R +K+ + ++ +RN+ S +I Sbjct: 1 MLELKFVRNNPEVVREALAKRHASAEPLDKLLEYDKAWREALKEGDVLKHQRNTVSLEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + +E + +++ ++++ + S ++ L+ IPN+P PIG Sbjct: 61 KLKKEKQDAK--EKIDEMRGISDRIKAIDEQLRDYESRMQDLLLNIPNIPSTTTPIGRDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N ++R VG+ + H++IGE L ++DF RA K+SG F+V G A LERAL Sbjct: 119 NDNPVVRVVGEPTKFGFTPKNHWDIGEDLDILDFKRAVKISGEGFTVYKGMGAKLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 FM+D+H+ + GYTEV P+L+ ++AM GTGQ+PKF +DM+ TDG +L PT+EV +TNL Sbjct: 179 NFMLDVHSRQ-GYTEVFPPVLMNEKAMTGTGQLPKFKEDMYACTDGYYLAPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y E +E +LP+ T FR EAG G+DTRG++RQHQF K ELV + E S+ EH Sbjct: 238 YMDEYLE--NLPIYLTAYTACFRREAGKHGQDTRGIIRQHQFNKVELVKFSLPETSYEEH 295 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEEIL+ L L YRV++LCTGDLGFSA KTYD+EVW+ Q YREISSCS ++ Sbjct: 296 EKLTRDAEEILQLLKLPYRVINLCTGDLGFSAAKTYDIEVWVPAQGKYREISSCSNFESY 355 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYR P KF HTLNGSG+AVGR ++AILENY DGSV IP LRPYM Sbjct: 356 QARRANIRYRTPEG--PKFVHTLNGSGLAVGRTVVAILENYQREDGSVEIPEALRPYMGG 413 Query: 420 LAVIKK 425 IKK Sbjct: 414 ATEIKK 419 >gi|255019841|ref|ZP_05291917.1| Seryl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] gi|254970770|gb|EET28256.1| Seryl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] Length = 422 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 193/427 (45%), Positives = 270/427 (63%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R PE + L +R + LD++ + L ++E++R RN S +G Sbjct: 1 MLDPNLLRTQPELVAAGLARRGFTLDLALLRHLDDRRKALQVELENLRNERNRLSKAVGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G +L L+ E + + ++ +E+++ ++ + +PN+P EVP G N Sbjct: 61 AKRSGEDALA--LQGEATAVSARIATVEEDQRAALAAWDTFVQTLPNLPDAEVPDGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ + R+H +I E LG+ DF +L+G+RF VL G A LERAL Q Sbjct: 119 DNVELRRWGEPRTFDFAVRDHVDIAEQLGMADFAAGARLAGSRFVVLKGFGARLERALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNL 239 FM+D+ T EHGY E++ P L +++GTGQ+PKF +D+F D +LIPT+EV LTNL Sbjct: 179 FMLDVQTQEHGYLEIAPPYLANAASLFGTGQLPKFEEDLFALRDDPYYLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 I+E +LP RF P FR EAG+AGRDTRGM+RQHQF K E+V I R + S H Sbjct: 239 LRESIVE--TLPQRFCAYTPCFRREAGAAGRDTRGMIRQHQFDKVEIVQIVRPDASAAAH 296 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + + AE IL+RL+L YRVV+LC GDLGFSA KTYDLEVWL Q +YREISSCS G+F Sbjct: 297 EELTAHAESILQRLELPYRVVALCAGDLGFSAAKTYDLEVWLPSQGMYREISSCSNFGSF 356 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+ RYR + + HTLNGSG+AVGR L+A+LEN+ ADGS+ +P LRPY+ Sbjct: 357 QARRLQLRYR-KDDGRPELAHTLNGSGLAVGRTLVALLENHQQADGSLRVPAALRPYLGG 415 Query: 420 LAVIKKE 426 + VI+ + Sbjct: 416 VEVIRGQ 422 >gi|319744352|gb|EFV96713.1| serine--tRNA ligase [Streptococcus agalactiae ATCC 13813] Length = 425 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 202/427 (47%), Positives = 282/427 (66%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + + LD K R L+ K E+ +A+RN SA I Sbjct: 1 MLDLKRIRTDFDAVAKKLATRGVDQETLTTLKELDIKRRELLIKAEEAKAQRNVASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL + ++ E +V ++L+ +++ +PN P ++VP+G Sbjct: 61 QAKR--NKENADEQIAAMQTLSADIKAIDAELADVDANLQSMVTVLPNTPADDVPLGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE+LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPREFDFEAKAHWDLGESLGILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 SFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSPFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD ++ HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEVDGKVRLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 N+ +IK Sbjct: 418 NIDIIKP 424 >gi|257885573|ref|ZP_05665226.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|261206902|ref|ZP_05921591.1| seryl-tRNA synthetase [Enterococcus faecium TC 6] gi|289567404|ref|ZP_06447770.1| seryl-tRNA synthetase [Enterococcus faecium D344SRF] gi|293557178|ref|ZP_06675729.1| seryl-tRNA synthetase [Enterococcus faecium E1039] gi|294614525|ref|ZP_06694437.1| seryl-tRNA synthetase [Enterococcus faecium E1636] gi|257821429|gb|EEV48559.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|260078530|gb|EEW66232.1| seryl-tRNA synthetase [Enterococcus faecium TC 6] gi|289160800|gb|EFD08734.1| seryl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291592618|gb|EFF24215.1| seryl-tRNA synthetase [Enterococcus faecium E1636] gi|291600659|gb|EFF30960.1| seryl-tRNA synthetase [Enterococcus faecium E1039] Length = 423 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 203/426 (47%), Positives = 275/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQN E + L R ++ + + LDE R L+ K E+++ RN SA+I Sbjct: 1 MLDVKMMRQNIEEVQEKLMTRGVKKETLAEFMELDENRRKLLVKSEELKKYRNDVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q A E + + L+ E EV LK++ + +PN+P + VP+GT Sbjct: 61 QLKRA--KEDASAKIAEMKEVGGNIKALDTEIAEVDEKLKQIATTLPNLPHDSVPVGTDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR + + + H+EI E L ++DF+R K++G+RF G A LERA+ Sbjct: 119 EDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI++ LP+ FT L+P+FRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNDEILDGADLPIYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+ILK+L L YRV++L TGD+GFSA KTYDLEVW+ Q+ YREISSCS C + Sbjct: 299 LEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD + K + + HTLNGSG+AVGR + AILENY N DGSVT+P L PYM Sbjct: 359 FQARRAMIRYRDNDGK-IHYAHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEALVPYMG 417 Query: 419 NLAVIK 424 NL VIK Sbjct: 418 NLKVIK 423 >gi|332522516|ref|ZP_08398768.1| serine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] gi|332313780|gb|EGJ26765.1| serine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] Length = 425 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 274/428 (64%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + LK R + + ++ LD++ R L+ K E+++A RN SA I Sbjct: 1 MLDLKRIRTDFDSVAAKLKMRGVSEETLSHLKDLDQERRQLLIKSEELKAERNIASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + + + + ++ E E+ + ++I+ +PN P + VP+G Sbjct: 61 QAKRQ--KEDANQQIADMQKVSANIKAIDNELAEIDEKVTEIITTLPNTPHDSVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G + H+++GEAL ++D++R K++GARF A LERAL Sbjct: 119 EENVEVRRWGTPREFDFEIKAHWDLGEALDILDWERGAKVTGARFLFYKNLGARLERALY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYQEIIPPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI++ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYD+EVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVITLCTGDMGFSAAKTYDVEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD +K HTLNGSG+AVGR + AILENY N DGS+TIP VLRPYM Sbjct: 358 FQARRAQIRYRDEVDGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSITIPEVLRPYMG 417 Query: 419 NLAVIKKE 426 +I + Sbjct: 418 GADIISPK 425 >gi|317402141|gb|EFV82733.1| SerS protein [Achromobacter xylosoxidans C54] Length = 448 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 198/452 (43%), Positives = 277/452 (61%), Gaps = 31/452 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R++ + + LK R + +E L+ + + + + E ++ARRN+ + QIGQ Sbjct: 1 MLDPILLRKDLQTVVDRLKSRGVSFDTERFNELESRRKAVQTETESLQARRNALAKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G A+ E+ + E+L LE+E + L +L+ +PN+P VP+G SA+ Sbjct: 61 LKAKG--EDASAVMAESQAVPERLKQLEEELAALQQPLNELLMSVPNLPHASVPLGESAD 118 Query: 121 ENILIRSV--------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 +N+ +R G P+ +R+H +GE LG +DFD A KLSGARFS + G +A Sbjct: 119 DNVEVRRWLPAAAGADGNPPALPFEARDHVALGEPLG-LDFDTAAKLSGARFSFMRGPIA 177 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------------ 220 L RAL QFM+DL T HGYTE P +V +YGTGQ+PKF DDMF Sbjct: 178 RLHRALAQFMLDLQTGTHGYTECYTPYIVNASTLYGTGQLPKFKDDMFAVSKGGGDDDPK 237 Query: 221 -------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + ++LI TSE++LT++ I + LPL+ T P FRSEAGS GRDTR Sbjct: 238 VDEHGKPFVREDQYLISTSEITLTSVVRDTIQAAADLPLKLTAHTPCFRSEAGSGGRDTR 297 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 GM+RQHQF K E+V +T+ + S+ E M+ AE +L+ L L YRV+ LCTGD+GF + K Sbjct: 298 GMIRQHQFDKVEMVQVTQPDQSYEALEGMVGHAERVLQLLGLPYRVMLLCTGDMGFGSAK 357 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 TYDLEVWL QN +REISS S C FQ+RRM +R+R+ K ++ HTLNGSG+AVGR L Sbjct: 358 TYDLEVWLPAQNTWREISSVSNCETFQARRMQARFRNAQGK-PEYVHTLNGSGLAVGRAL 416 Query: 394 IAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +A+LEN+ ADGS+ +P L+PYM L V+K Sbjct: 417 VAVLENHQQADGSILVPEALQPYMGGLTVLKP 448 >gi|22536539|ref|NP_687390.1| seryl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|25010417|ref|NP_734812.1| seryl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|76787984|ref|YP_329077.1| seryl-tRNA synthetase [Streptococcus agalactiae A909] gi|76798994|ref|ZP_00781192.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77406550|ref|ZP_00783601.1| seryl-tRNA synthetase [Streptococcus agalactiae H36B] gi|77411466|ref|ZP_00787811.1| seryl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|54039691|sp|P67566|SYS_STRA5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|54042042|sp|P67565|SYS_STRA3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123602391|sp|Q3K326|SYS_STRA1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|22533373|gb|AAM99262.1|AE014208_2 seryl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|23094769|emb|CAD45988.1| seryl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|76563041|gb|ABA45625.1| seryl-tRNA synthetase [Streptococcus agalactiae A909] gi|76585644|gb|EAO62204.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77162469|gb|EAO73435.1| seryl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|77174857|gb|EAO77675.1| seryl-tRNA synthetase [Streptococcus agalactiae H36B] Length = 425 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 202/427 (47%), Positives = 282/427 (66%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + + LD K R L+ K E+ +A+RN SA I Sbjct: 1 MLDLKRIRTDFDVVAKKLATRGVDQETLTTLKELDIKRRELLIKAEEAKAQRNVASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL + ++ E +V ++L+ +++ +PN P ++VP+G Sbjct: 61 QAKR--NKENADEQIAAMQTLSADIKAIDAELADVDANLQSMVTVLPNTPADDVPLGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE+LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPREFDFETKAHWDLGESLGILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 SFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSPFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD ++ HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEVDGKVRLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 N+ +IK Sbjct: 418 NIDIIKP 424 >gi|329114108|ref|ZP_08242872.1| Seryl-tRNA synthetase [Acetobacter pomorum DM001] gi|326696647|gb|EGE48324.1| Seryl-tRNA synthetase [Acetobacter pomorum DM001] Length = 422 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 211/423 (49%), Positives = 281/423 (66%), Gaps = 2/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ +R +P D L +R +EP S +L+ DE+ R +++ + RR + + +IG Sbjct: 1 MHDIRALRADPAAFDADLARRGIEPVSARLLAWDEERRQAQTVLQEKQGRRKALAREIGT 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G S L+ E L+ ++ LE++ + + L++ +PN VP G + Sbjct: 61 LKRSGGDS--SDLEAEGLALRAEMEALEEQVNTLGRESTALLANLPNRLDATVPEGPDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++ G KP+ ++HFE+GE L MDF A KLSG+RF VL G +A L RALGQ Sbjct: 119 ANVVQHEWGTKPAFTFTPKQHFELGETLKQMDFATAAKLSGSRFVVLRGGIARLARALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH +EHGYTE P++V D+AMYGT ++PKFAD F T DGRWLIPT+EV LT Sbjct: 179 FMLDLHVTEHGYTETQVPVMVNDDAMYGTDKLPKFADQSFRTEDGRWLIPTAEVPLTASV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S +I+E +LPLR T L+ FRSEAG+AGRD RGMLRQHQF K E+VS+T E+S EHE Sbjct: 239 SGDILEGAALPLRMTALSQCFRSEAGAAGRDVRGMLRQHQFEKVEMVSVTTPEESDAEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE++L++L++ YR + LC GD GF A KT+DLE WL GQ+ +REISSCS +FQ Sbjct: 299 RMTRCAEKVLEKLNIPYRRMLLCAGDTGFGAAKTFDLEAWLPGQDAWREISSCSNTRDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + F HTLNGSG+AVGR LIA++ENY N DGSVT+P VLRPYM + Sbjct: 359 ARRMNARYRPQAGAAPAFVHTLNGSGLAVGRTLIAVMENYQNEDGSVTVPDVLRPYMGGI 418 Query: 421 AVI 423 I Sbjct: 419 EKI 421 >gi|85059089|ref|YP_454791.1| seryl-tRNA synthetase [Sodalis glossinidius str. 'morsitans'] gi|123519573|sp|Q2NTY9|SYS_SODGM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|84779609|dbj|BAE74386.1| seryl-tRNA synthase [Sodalis glossinidius str. 'morsitans'] Length = 430 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 193/431 (44%), Positives = 262/431 (60%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + + +E+ ++L + E+++A RN+ S IG Sbjct: 1 MLDPNLLRNELDAVAEKLARRKFKLDVATLRQHEERRKVLQVETENLQAERNARSKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G ++ L+ E + L E+L + E + S ++ +PN+P ++VP G N Sbjct: 61 AKSRG--EDIEPLRREVNQLGERLSSAKTELDALQSEIRDYAFSLPNIPDDDVPDGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + G+ R+H E+GE G +DF A KL+GARF V+ G +A L RAL Q Sbjct: 119 DNQEVSRWGEPRQYDFPIRDHVELGEIAGGLDFAAAVKLTGARFVVMRGQIARLHRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV ++YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYVEHYLPYLVNHASLYGTGQLPKFVEDLFHTQPLNEEADTSAYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EIIE +LPL+ T P FRSEAGS GRDTRG++R HQF K E+V + + Sbjct: 239 EVPLTNLIRDEIIEEDALPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQVVKP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 S E M S AE++L+ L L YR V LC GD+ F++CKTYDLEVWL QN YREISS Sbjct: 299 AQSMQALEEMTSHAEKVLQLLQLPYRKVLLCNGDMAFASCKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RRM +RYR K + HTLNGSG+AVGR L+A+LEN+ ADG + IP V Sbjct: 359 CSNISDFQARRMQARYRSRTDKKPQLVHTLNGSGLAVGRTLVAVLENHQLADGRIAIPAV 418 Query: 413 LRPYMNNLAVI 423 L+PYM L I Sbjct: 419 LQPYMKGLTHI 429 >gi|322434825|ref|YP_004217037.1| seryl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] gi|321162552|gb|ADW68257.1| seryl-tRNA synthetase [Acidobacterium sp. MP5ACTX9] Length = 451 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 197/445 (44%), Positives = 271/445 (60%), Gaps = 20/445 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE--YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD+ ++R N ++ L+ R L+P ++D R I + E +A RN S +I Sbjct: 4 MLDLAFVRTNLAQVEEKLRTRGLDPAVALANFAAIDTARREAITRSETTKAERNRLSNEI 63 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + + LK + LE E + L+ ++ +PN+P + VP+G Sbjct: 64 QALKKSGQDATSQ--MDAVKALKAEGEGLEVAAAEADTRLRDMMQTVPNLPADSVPLGAD 121 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + N +++ G P+ + H+E+GEALG++DF+RA K++GARF V G A LERAL Sbjct: 122 EHANQQVKTWGTIPTLDFTPKPHWELGEALGVLDFERAAKITGARFVVQFGQGARLERAL 181 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------------GR 226 FM+DLHT +HGYTEV P +V ++++GTGQ+PKFA+D+F D Sbjct: 182 ANFMLDLHTRQHGYTEVLPPAMVNSKSLFGTGQLPKFAEDLFHCDDKGPYEPGNYQDSDH 241 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 WLIPT+EV LTN++ E ++ L + F +RSEAGS G+DTRG++RQHQF K EL Sbjct: 242 WLIPTAEVPLTNIFRDETLDEADLTISFCAYTSCYRSEAGSHGKDTRGLIRQHQFQKVEL 301 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 V TR +DS EHE + AE IL++L L YR + LCTGD+GFS+ KTYDLEVWL GQ+ Sbjct: 302 VKFTRPQDSEAEHENLTRNAETILEQLGLPYRRMLLCTGDMGFSSAKTYDLEVWLPGQST 361 Query: 347 YREISSCSTCGNFQSRRMNSRYRD----PNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 YREISSCS +FQ+RR N RYR +K F HTLNGSG+AVGR +AILENY Sbjct: 362 YREISSCSNFESFQARRANIRYRPLVDGKPAKKPDFLHTLNGSGLAVGRTYVAILENYQQ 421 Query: 403 ADGSVTIPTVLRPYMNNLAVIKKEH 427 ADG++ IP VL PYM+ VI ++ Sbjct: 422 ADGTIRIPEVLIPYMDGETVIGRQQ 446 >gi|309388302|gb|ADO76182.1| seryl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 422 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 196/425 (46%), Positives = 282/425 (66%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+NPE + A++KR++E LD+K R L+ + E+++ +RN NS +IG+ Sbjct: 1 MLDMRFIRENPEVVAKAMEKRNMESPISEFQELDDKRRDLLYEAENLKNKRNINSDKIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L +E T+ ++ L+++ EV + L KL+ IPN+P + VP+G+ Sbjct: 61 LKRNG--EDASDLISEMQTVSARIKELDQKVDEVETKLNKLLLSIPNIPNQSVPVGSDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ G+ + H+++GE L ++DF+R K++G RF+ L G A LERAL Sbjct: 119 DNKEIKKWGEPRKFDFDYKAHWDLGEDLDILDFERGGKVTGTRFTFLKGAGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM++LHT EHGY EV P + ++M GTGQ+PKF DMF +LIPT+EV +TN+ Sbjct: 179 FMLNLHTDEHGYKEVFPPFIANADSMTGTGQLPKFEKDMFKLEGLDYYLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI++ + LP T + FR+EAG+ GRDTRG++RQHQF K E+V + EDS+ E Sbjct: 239 YRDEILDVEQLPEYLTAYSACFRAEAGAHGRDTRGIIRQHQFNKVEMVKFVKPEDSYAEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AE++L+RL+L YRVVSLCTGDL FS+ KTYDLEVW+ + YREISSCS +F Sbjct: 299 EKITADAEDVLQRLELPYRVVSLCTGDLTFSSAKTYDLEVWMPAYDSYREISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR RYR + S KF HTLNGSG+A+GR + AILENY N DG++T+P VLR +M Sbjct: 359 QARRAGIRYRPEPNASTKFVHTLNGSGLAIGRTVAAILENYQNEDGTITVPKVLRDFM-G 417 Query: 420 LAVIK 424 +IK Sbjct: 418 TDIIK 422 >gi|77164549|ref|YP_343074.1| seryl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|254433480|ref|ZP_05046988.1| seryl-tRNA synthetase [Nitrosococcus oceani AFC27] gi|123594620|sp|Q3JCA2|SYS_NITOC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|76882863|gb|ABA57544.1| seryl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|207089813|gb|EDZ67084.1| seryl-tRNA synthetase [Nitrosococcus oceani AFC27] Length = 427 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 273/426 (64%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R L +R E + +L+ + + + ++++A+RN+ S IG+ Sbjct: 1 MLDPKLLRNALADTTRQLARRGFEWDAAAFATLEAERKEMQVCTQELQAKRNARSKIIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + L E + L + L +E V + +++++ IPN+P P G Sbjct: 61 AKAQG--EDIAPLLAEMTELGDHLKTVEARLEVVQAQIEEILLGIPNLPDASTPPGKDEQ 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G P+ + ++H ++G +LG MDF+ A KLSG RF L G LA L RAL Q Sbjct: 119 DNVEVRRWGTPPALEFVPKDHVDLGASLG-MDFETAVKLSGTRFVTLIGPLAQLHRALIQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTNL 239 FM+D+HT EHGYTEV P L E++ GTGQ+PKF + +F D +LIPT+EV +TNL Sbjct: 178 FMLDVHTREHGYTEVYVPYLANRESLVGTGQLPKFEEGLFAIRDTGYYLIPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 EI+ ++ LPL++ P FRSEAGS G+DTRGM+RQHQF K ELV I E S H Sbjct: 238 VRGEILLAERLPLKYVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQIVPPEVSQQAH 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AE IL+RL L YRV++LC GDLGF++ KTYDLEVWL GQ YREISSCS +F Sbjct: 298 EDLTGHAEAILQRLGLPYRVMNLCAGDLGFASSKTYDLEVWLPGQQTYREISSCSNFLDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+ +R+RDP ++ + HTLNGSG+AVGR L+A++ENY ADGS+ IP L+PYM Sbjct: 358 QARRIQARWRDPKTQKPAWVHTLNGSGLAVGRTLLALMENYQQADGSIRIPETLQPYMGG 417 Query: 420 LAVIKK 425 ++V++ Sbjct: 418 VSVLQP 423 >gi|88798712|ref|ZP_01114295.1| seryl-tRNA synthetase [Reinekea sp. MED297] gi|88778475|gb|EAR09667.1| seryl-tRNA synthetase [Reinekea sp. MED297] Length = 429 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 187/428 (43%), Positives = 257/428 (60%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +RQ+ + + LK + + SL+ + L + E+++A R S IGQ Sbjct: 1 MLDIKQLRQDIDSIAKTLKVKGFDLNVSAFQSLESSRKSLQVETEELQAERKKASKAIGQ 60 Query: 61 AIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + EG ++ + L E E +V L L+ IPN P VP G Sbjct: 61 YVREGMTPDEAKAKVQETLDKIAASLDEKEHELKKVQDQLDDLMYSIPNTPDASVPEGKD 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N+ + G PS ++H ++G AL +DF+ A KL+G+RF+V+ G +A L RAL Sbjct: 121 EDDNVEVARWGTPPSFAFDIKDHVDVGAALNGLDFETAAKLTGSRFAVMQGKVARLHRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--CTTDGRWLIPTSEVSL 236 Q+M+DL T+EHGY E + P +V +++YGTGQ+PKF +D+F +LIPT+EV L Sbjct: 181 TQYMLDLQTNEHGYLETAVPFMVNRDSLYGTGQLPKFGEDLFKLDADQEYYLIPTAEVPL 240 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EI++ LP+R P FRSEAGS GRD RGM+RQHQF K ELV I SF Sbjct: 241 TNIVRGEILDVADLPVRLAAHTPCFRSEAGSYGRDVRGMIRQHQFEKVELVQIVEPSRSF 300 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE +L+ L+L YR V LC GDLG SA KTYDLEVWL Q+ YREISSCS Sbjct: 301 EALEELTGHAEAVLQALELPYRKVILCGGDLGVSAAKTYDLEVWLPAQDTYREISSCSNM 360 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+RRM +RYR+P + + HTLNGSG+AVGR L+AILENY G + +P VL+PY Sbjct: 361 TDYQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAILENYQTDTG-LNVPAVLQPY 419 Query: 417 MNNLAVIK 424 M + I Sbjct: 420 MGGVDFIP 427 >gi|294619786|ref|ZP_06699182.1| seryl-tRNA synthetase [Enterococcus faecium E1679] gi|291593970|gb|EFF25448.1| seryl-tRNA synthetase [Enterococcus faecium E1679] Length = 422 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 202/425 (47%), Positives = 274/425 (64%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQN E + L R ++ + + LDE R L+ K E+++ RN SA+I Sbjct: 1 MLDVKMMRQNIEEVQEKLMTRGVKKETLAEFMELDENRRKLLVKSEELKKYRNDVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q A E + + L+ E EV LK++ + +PN+P + VP+GT Sbjct: 61 QLKRA--KEDASAKIAEMKEVGGNIKALDTEIAEVDEKLKQIATTLPNLPHDSVPVGTDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR + + + H+EI E L ++DF+R K++G+RF G A LERA+ Sbjct: 119 EDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI++ LP+ FT L+P+FRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNDEILDGADLPIYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+ILK+L L YRV++L TGD+GFSA KTYDLEVW+ Q+ YREISSCS C + Sbjct: 299 LEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD + K + + HTLNGSG+AVGR + AILENY N DGSVT+P L PYM Sbjct: 359 FQARRAMIRYRDNDGK-IHYAHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEALVPYMG 417 Query: 419 NLAVI 423 NL VI Sbjct: 418 NLKVI 422 >gi|167044235|gb|ABZ08916.1| putative tRNA synthetase class II core domain (G, H, P, S and T) [uncultured marine microorganism HF4000_APKG5H11] Length = 429 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 186/427 (43%), Positives = 272/427 (63%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML I+ IR++P+ + AL+ R E +L LD + R I + +D+ A RN S ++GQ Sbjct: 1 MLSIEHIREHPDEVRRALQTRGEEDSITEVLELDSQIRAAITQRDDLNAERNRVSKEVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G + + ++ + + +Q L ++ + L L+ +PN+P ++VP+G Sbjct: 61 ARSQGQEA-SEEVRAQMRQIGDQADALNEQTKVLGDKLGGLMLTLPNLPQDDVPVGEDET 119 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++++R G+ P + H+E+GE LG++DF+R TKL+G+RF + G+ LERAL Sbjct: 120 GSVIVRQNGEPPVLDFSPKPHWELGEELGIIDFERGTKLAGSRFYTMLGYGPKLERALIA 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 +M+DLH++EHGYTEVS P +V+ E M G+G +PKFAD+++ D WLIPT+EV +TNL Sbjct: 180 WMLDLHSNEHGYTEVSVPAVVKREIMEGSGNLPKFADNLYHDDEDDLWLIPTAEVPITNL 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EII + +LPL++ P FR E SAGRDTRG+ R HQF K E+ E S E Sbjct: 240 YRDEIIPANTLPLKYVAQTPCFRREKASAGRDTRGIKRVHQFNKVEMYQFVEPETSNQEL 299 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E ++ AE++ ++L YRV+ LCTGD+GF++ KTYD+EVW AG + E+SSCS C +F Sbjct: 300 ENLVDDAEDVCRKLGFTYRVLQLCTGDMGFASSKTYDIEVWAAGCEEWLEVSSCSNCTDF 359 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYR + + HTLNGSG+A+ R +IAILENY DGSV IP VLRPY Sbjct: 360 QARRSNIRYRAEDGGRPRLPHTLNGSGLALPRVIIAILENYQQPDGSVVIPEVLRPYT-G 418 Query: 420 LAVIKKE 426 VI + Sbjct: 419 FDVIPAK 425 >gi|304319796|ref|YP_003853439.1| seryl-tRNA synthetase [Parvularcula bermudensis HTCC2503] gi|303298699|gb|ADM08298.1| seryl-tRNA synthetase [Parvularcula bermudensis HTCC2503] Length = 425 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 213/425 (50%), Positives = 288/425 (67%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ I+ +P+ D A+ +R + ++ +++LDE+ K + + +A + S IGQ Sbjct: 1 MHDIRAIKDDPDGFDAAMSRRGVAIKAADLIALDERRVANTKAMNEAQAAQKQASKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ G+ + +ALK E + LK + E ++ + L+ + IPN +VP G S + Sbjct: 61 AMGAGDQAKAEALKAEVAALKASVQEREADDRRLSDELRAALLPIPNRLAPDVPDGESED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G P I ++H ++GE LG MDF+ A K+SG+RF++LTG LA LERAL Sbjct: 121 DNVEIRRWGTPPD-IATPQDHVDLGEGLGQMDFETAAKISGSRFALLTGDLARLERALAT 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH E GY EVS P+LVRD+A+ GTGQ+PKF +D+F TT G +L PT+EV LTNL Sbjct: 180 FMLDLHRHEFGYIEVSPPVLVRDDALVGTGQLPKFEEDLFKTTSGHYLTPTAEVPLTNLV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++E SLP R+T P FRSEAGSAGRDTRGM+R HQF K ELVSIT E+ EHE Sbjct: 240 RDSLLEEDSLPRRYTAYTPCFRSEAGSAGRDTRGMIRLHQFSKVELVSITTPEEGHQEHE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM AE +L+RLDL YRVV+LC GD+GF A KTYDLEVWL QN YREISSCS G+FQ Sbjct: 300 RMTQAAETVLQRLDLPYRVVTLCAGDIGFGALKTYDLEVWLPAQNTYREISSCSYVGDFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R K + HTLNGSG+AVGR L+A+LENY ADG++ +P L+PY+ Sbjct: 360 ARRMNARFRREGEKKPLYVHTLNGSGLAVGRTLVAVLENYQEADGAIRVPDALQPYI-GQ 418 Query: 421 AVIKK 425 + I++ Sbjct: 419 SRIER 423 >gi|160901593|ref|YP_001567174.1| seryl-tRNA synthetase [Petrotoga mobilis SJ95] gi|189083577|sp|A9BEX3|SYS_PETMO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|160359237|gb|ABX30851.1| seryl-tRNA synthetase [Petrotoga mobilis SJ95] Length = 424 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 202/425 (47%), Positives = 277/425 (65%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD+++IR+NP+ + AL KR+ E + I+S DE+ R L+++IE +RA+RN NS + Sbjct: 1 MLDLKYIRENPQEIKEALTKRNNETSIIDEIISFDEERRKLLQQIETLRAQRNQNSKLVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + A+ + + + + EQ+ LE + + +L + C+PN+P VP+G Sbjct: 61 KLKAQKKNDEAEEIIIQGKEISEQIKNLESDLKNIEDNLNYKLLCVPNIPDSGVPVGKDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+ +R GK + H+++G L L+DFDRA KLSG+RF++L G +A LE AL Sbjct: 121 NENLEVRRWGKPREFDFEPKAHWDLGTELNLLDFDRAAKLSGSRFTILKGDIARLELALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FMIDLHT +HGYT + P LV E + +GQ+PKF DD++ T+ D +LI T+EVSL Sbjct: 181 NFMIDLHTKDHGYTFILPPHLVTKETITSSGQLPKFEDDLYKTSLDQMYLISTAEVSLAG 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ +E +E SLPL++ P +R EAGS G+D RGM+RQHQF K EL T E+S Sbjct: 241 LHRNETLEFNSLPLKYVAYTPCYRREAGSYGKDVRGMIRQHQFDKVELFWYTTPEESSQA 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + S AE++L+ L+L YRVV+LCTGDLGF+A KTYDLEVWL N Y+EISSCS + Sbjct: 301 LEELTSHAEKVLQLLNLPYRVVALCTGDLGFAAAKTYDLEVWLPSYNDYKEISSCSNTKD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ RR N RYRD +K L F HTLNGSG+AVGR L+AI+ENY A+G + IP L PYM Sbjct: 361 FQGRRGNIRYRDRENK-LNFVHTLNGSGLAVGRTLVAIMENYQTANGKIEIPEKLIPYM- 418 Query: 419 NLAVI 423 I Sbjct: 419 GKEFI 423 >gi|307822747|ref|ZP_07652978.1| seryl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307736351|gb|EFO07197.1| seryl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 423 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 192/425 (45%), Positives = 269/425 (63%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + R + + L +R + EY L+ + + + K ++++ RNS+S IG Sbjct: 1 MLDPRLFRTELDFVKEQLNRRSFDFNPEYYSELEARRKDIQVKTQELQNERNSSSKAIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V L ++ L ++L E E ++ + + L+ IPN+ E VP G S + Sbjct: 61 AKAKG--EDVQPLLDQVQHLGDELKAAETELSDIQAKMTALMEGIPNLLDESVPNGKSED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ PS ++H ++G +G MDF+ K++ ARF VL G LA L+RA+ Q Sbjct: 119 DNLEISRWGEIPSFDFEPKDHVDLGAKIG-MDFELGAKIASARFVVLNGPLARLQRAIIQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--RWLIPTSEVSLTN 238 M+D HT+EHGY E P LV +++ GTGQ+PKF D+F D +LIPT+EV +TN Sbjct: 178 LMLDTHTTEHGYIETYVPFLVNADSLRGTGQLPKFEADLFKANDDPALYLIPTAEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + II++K LPL+F +P FRSEAG+ GRD RGM+RQHQF K E+V I + EDS Sbjct: 238 IVRDVIIDAKDLPLKFVCHSPCFRSEAGAYGRDVRGMIRQHQFEKVEIVQIVKPEDSAAA 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE++ AE ILK L+L YR + LC GD GFS+ KTYDLEVWL GQ YREISSCS + Sbjct: 298 HEQLTGHAEAILKILNLPYRKMLLCAGDTGFSSTKTYDLEVWLPGQGAYREISSCSNFKD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +R+R+P + + HTLNGSG+A GR LIA++ENY +A+G + IP LRPYM Sbjct: 358 FQARRLQARWRNPETGKPELAHTLNGSGLAAGRTLIAVMENYQDAEGRIHIPDALRPYMG 417 Query: 419 NLAVI 423 L VI Sbjct: 418 GLEVI 422 >gi|257896269|ref|ZP_05675922.1| seryl-tRNA synthetase [Enterococcus faecium Com12] gi|293379350|ref|ZP_06625494.1| serine--tRNA ligase [Enterococcus faecium PC4.1] gi|257832834|gb|EEV59255.1| seryl-tRNA synthetase [Enterococcus faecium Com12] gi|292641873|gb|EFF60039.1| serine--tRNA ligase [Enterococcus faecium PC4.1] Length = 423 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 201/426 (47%), Positives = 275/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQN E + L R ++ + + LDE R L+ K E+++ RN SA+I Sbjct: 1 MLDVKMMRQNIEEVQEKLMTRGVKKETLAEFMELDENRRKLLVKSEELKKYRNDVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q A E + + L+ E EV LK++ + +PN+P + VP+G+ Sbjct: 61 QLKRA--KEDASAKIAEMKEVGGNIKALDTEIAEVDEKLKQIATTLPNLPHDSVPVGSDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR + + + H+EI E L ++DF+R K++G+RF G A LERA+ Sbjct: 119 EDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI++ LP+ FT L+P+FRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNDEILDGADLPVYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+ILK+L L YRV++L TGD+GFSA KTYDLEVW+ Q+ YREISSCS C + Sbjct: 299 LEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD + K + + HTLNGSG+AVGR + A+LENY N DGSVT+P L PYM Sbjct: 359 FQARRAMIRYRDNDGK-IHYAHTLNGSGLAVGRTVAAVLENYQNEDGSVTVPEALVPYMG 417 Query: 419 NLAVIK 424 NL VIK Sbjct: 418 NLKVIK 423 >gi|154248324|ref|YP_001419282.1| seryl-tRNA synthetase [Xanthobacter autotrophicus Py2] gi|238686792|sp|A7INN1|SYS_XANP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|154162409|gb|ABS69625.1| seryl-tRNA synthetase [Xanthobacter autotrophicus Py2] Length = 468 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 236/466 (50%), Positives = 291/466 (62%), Gaps = 41/466 (8%) Query: 1 MLDIQWIRQNPEHLDIALKKRH---------LEPQSEYILSLDEKNRILIKKIEDIRARR 51 M DI+WIR P L AL +R E Y++ LDE+ R + +E ARR Sbjct: 1 MHDIKWIRDEPVGLITALVRRGGGSDEAKSAAEKLVAYLIGLDEQRRRTLTDLEGKLARR 60 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 N+ S +IGQA A+ + L E + LK +P LE + SL ++ IPN PL Sbjct: 61 NAASKEIGQAKAQKDEERASRLMAEVANLKADIPTLEALAKDWEKSLDNALAAIPNAPLA 120 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 EVP G ++N+ G S ++HFE+GEALG MDF+ A KLSGARF V G L Sbjct: 121 EVPPGADEHDNVEKSRFGVARSYAFTPKQHFEVGEALGQMDFETAAKLSGARFVVNKGPL 180 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------- 222 A LERALGQF +D+HT EHGY EV+ PLLVRD+AM+GT Q+PKF +D F Sbjct: 181 ARLERALGQFFLDVHTGEHGYMEVNPPLLVRDDAMFGTAQLPKFREDQFFVNTVDGIEAI 240 Query: 223 -----------------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 GRWLIPT+EV LTNL I+ + LPLR T P Sbjct: 241 SAETKGFETFSDEFKSKLTEAMSYQGRWLIPTAEVPLTNLVRESILSEEELPLRLTACTP 300 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRV 319 FR+EAG+AGRDTRGM+RQHQF K ELVSIT E S EHERML+CAE +LK+LDLHYRV Sbjct: 301 CFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEKSAEEHERMLACAEAVLKKLDLHYRV 360 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFT 379 V+LCTGD+GF++ KTYD+EVWL GQ +REISSCS CG+FQ+RRMN+RYR K +F Sbjct: 361 VTLCTGDMGFASQKTYDIEVWLPGQGAFREISSCSVCGDFQARRMNARYRPAEGKGPRFV 420 Query: 380 HTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 HTLNGSGVAVGR L+A+LE Y +G+VT+P L PYM L I+K Sbjct: 421 HTLNGSGVAVGRALVAVLETYQQENGAVTVPDALLPYMGGLKTIEK 466 >gi|90407807|ref|ZP_01215984.1| seryl-tRNA synthetase [Psychromonas sp. CNPT3] gi|90311072|gb|EAS39180.1| seryl-tRNA synthetase [Psychromonas sp. CNPT3] Length = 428 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 195/429 (45%), Positives = 269/429 (62%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R N E L R + I L+EK + L + ED++A RNS S +IGQ Sbjct: 1 MLDPKLLRNNIEETAQLLAGRGFILDVDLINELEEKRKALQIQTEDLQAERNSRSKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L+ + + QL ++ +++ ++++ IPN+PL +VP+G + + Sbjct: 61 AAKRG--EDITELRAQMAEFGAQLDATKETFNQLVEQIQEIAYTIPNLPLSDVPVGKNED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI I + G + ++H ++GEALG +DF A K+SG+RF ++ G +A L RALGQ Sbjct: 119 DNIEISTWGTPKTFSFAVKDHVDLGEALGGLDFKSAVKISGSRFIIMQGQIAKLHRALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTSEV 234 +M++LHT+EHGYTE PLLV ++Y T Q+PKF DD+F T LIP++EV Sbjct: 179 YMLNLHTNEHGYTETYVPLLVNAASLYATTQLPKFGDDLFNTKPATEEGVVMSLIPSAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL I + LP++ T FRSEAGS GRDTRG++RQHQF K ELV + E Sbjct: 239 PLTNLSRDVIFDESELPIKITAQTACFRSEAGSYGRDTRGLIRQHQFEKVELVQFVQPEK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + + AE++L+ L+L YR V LCTGD+GFSA KTYDLEVWL QN YREISSCS Sbjct: 299 SAAALEELTAHAEQVLRNLELPYRKVILCTGDMGFSASKTYDLEVWLPAQNTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 G+FQ+RR+ +R+R K + HTLNGSG+AVGR L+A+LENY DG + IP VL+ Sbjct: 359 NVGDFQARRLQARFRPTGQKKAELIHTLNGSGLAVGRTLVAVLENYQLEDGRIEIPAVLQ 418 Query: 415 PYMNNLAVI 423 YM L I Sbjct: 419 HYMGGLTHI 427 >gi|257888112|ref|ZP_05667765.1| seryl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257824166|gb|EEV51098.1| seryl-tRNA synthetase [Enterococcus faecium 1,141,733] Length = 423 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 202/426 (47%), Positives = 274/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQN E + L R ++ + + LDE R L+ K E+++ RN SA I Sbjct: 1 MLDVKMMRQNIEEVQEKLMTRGVKKETLAEFMELDENRRKLLVKSEELKKYRNDVSADIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q A E + + L+ E EV LK++ + +PN+P + VP+G+ Sbjct: 61 QLKRA--KEDASAKIAEMKEVGGNIKALDTEIAEVDEKLKQIATTLPNLPHDSVPVGSDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR + + + H+EI E L ++DF+R K++G+RF G A LERA+ Sbjct: 119 EDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI++ LP+ FT L+P+FRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNDEILDGADLPVYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+ILK+L L YRV++L TGD+GFSA KTYDLEVW+ Q+ YREISSCS C + Sbjct: 299 LEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD + K + + HTLNGSG+AVGR + AILENY N DGSVT+P L PYM Sbjct: 359 FQARRAMIRYRDNDGK-IHYAHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEALVPYMG 417 Query: 419 NLAVIK 424 NL VIK Sbjct: 418 NLKVIK 423 >gi|160897351|ref|YP_001562933.1| seryl-tRNA synthetase [Delftia acidovorans SPH-1] gi|238687207|sp|A9BYK5|SYS_DELAS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|160362935|gb|ABX34548.1| seryl-tRNA synthetase [Delftia acidovorans SPH-1] Length = 438 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 192/439 (43%), Positives = 266/439 (60%), Gaps = 17/439 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ + L+ R E SL+ + + L + E+++++RN S Q Sbjct: 1 MLDILLLRKDLDSAVARLETRKKPQAFLNVEAFQSLEAERKSLQTRTEELQSKRNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G +A K E +LK +L ++ L+ ++ +PN+P + VP+G Sbjct: 61 IGMLMGKGEKDAAEAAKAEVGSLKTELDQSATRLEQIQGELQTMLLAVPNLPHDSVPVGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N+ R G + ++H ++G+ LG +DFD KLSG+RF+V+ G +A L RA Sbjct: 121 DESGNVEARRWGTPKTFDFEVKDHVDVGQPLG-LDFDMGVKLSGSRFTVMKGPIARLHRA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------------CTTDG 225 L QFMIDL T HGYTE P V +++ GTGQ+PKF D+F Sbjct: 180 LAQFMIDLQTDSHGYTECYVPYAVNADSLKGTGQLPKFEGDLFAAKKGGQDGEPVPDNAA 239 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPT+EV LTN ++ LP++ T +P FRSEAGS GRDTRGM+RQHQF K E Sbjct: 240 LYLIPTAEVPLTNFVRDVVVAEDQLPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVE 299 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I E S+ E M AE +L++L L YRV+SLCTGD+GF A KTYDLEVWL QN Sbjct: 300 MVQIVHPEKSYEALEEMTGHAEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQN 359 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LENY NADG Sbjct: 360 TYREISSVSNCEAFQARRLQARFKNAQGKN-ELVHTLNGSGLAVGRTLVAVLENYQNADG 418 Query: 406 SVTIPTVLRPYMNNLAVIK 424 SVTIP LRPYM ++K Sbjct: 419 SVTIPEALRPYMGGQTLLK 437 >gi|328954350|ref|YP_004371684.1| Seryl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328454674|gb|AEB10503.1| Seryl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 425 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 195/425 (45%), Positives = 279/425 (65%), Gaps = 3/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR + + AL R E E +LDE R+L+ ++ED R RN+ S ++G+ Sbjct: 1 MLDLKFIRTHLGEVKQALIHRGQEFLLEDFEALDEIRRLLLGQVEDRRRERNALSEEVGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 AL + +++ LE + + S+++ + +PN+P VP+G++++ Sbjct: 61 LKKAKQ--DAAALMERVREINQEIKDLELDLRDKESAVQDFLLNLPNLPHSSVPVGSTSD 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +++ G+ P +R H+EIGE LG++DF+ A K++GARF++L G + LERAL Sbjct: 119 DNPVVKRWGEPPVFGFPARPHWEIGEYLGILDFETAAKITGARFALLKGPASRLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHT +HGY EV P ++ + GTGQ+PKF +D+F +L PT+EV +TN+ Sbjct: 179 FMLDLHTQKHGYLEVWPPFIINRASAQGTGQLPKFKEDLFKLEDWDYYLTPTAEVPVTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ ++LP+ +T P FRSEAGS G+D RG++RQHQF K ELV T E S+ Sbjct: 239 HRDEILAEEALPISYTAYTPCFRSEAGSHGKDVRGLIRQHQFDKVELVKFTAPESSYEAL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++LS AEE+L+ L+L Y+VV LCTGD+GF+A KTYD+EVWL GQ LYREISSCS F Sbjct: 299 EKLLSDAEEVLQELELPYQVVVLCTGDMGFAAAKTYDIEVWLPGQGLYREISSCSNFEAF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +K HTLNGSG+AVGR L+AILENY ADGSV IP LRPYM Sbjct: 359 QARRANIRFRRRGAKGTDLVHTLNGSGLAVGRTLVAILENYQQADGSVVIPHKLRPYMGG 418 Query: 420 LAVIK 424 + VI+ Sbjct: 419 MEVIR 423 >gi|269122820|ref|YP_003305397.1| seryl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] gi|268314146|gb|ACZ00520.1| seryl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] Length = 422 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 272/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+N E + LK R E + +L +D K R L+ ++E ++ RN SA IG+ Sbjct: 1 MLDMKFIRENVELVKQGLKNRKSEYNLDELLEMDIKRRTLLTEVETLKKERNDVSAIIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG S LK + + ++ L+ E E+ K L+ IPNVP P+G S + Sbjct: 61 NAREGIDS--TELKENMAKVSNKIKELDVEVLEIEEKQKMLLLTIPNVPHVSTPVGESED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR GK + H E+G L ++DF+R KLSG+RF+V G A LERAL Sbjct: 119 DNVEIRRWGKPTEFNFEVKSHDELGVNLDILDFERGAKLSGSRFTVYKGMGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+D+HT EHG+TE+ P L + + M GTGQ+PKF +DM+ + +LIPT+EV+LTN+ Sbjct: 179 FMLDVHTEEHGFTEILTPQLAKKDIMIGTGQLPKFEEDMYKIQGEDLYLIPTAEVTLTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ EI++ + LP F FR EAGS GRD +G++RQHQF K E+V I + S+ E Sbjct: 239 YAGEILKEEELPKHFCGFTACFRQEAGSGGRDLKGLIRQHQFNKVEMVKIVHPDKSYEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M +C E+IL++L+L YRV+SLCTGD+GFSA KTYD+EVW+ QN YREISSCS +F Sbjct: 299 EHMTNCGEKILQKLNLPYRVLSLCTGDMGFSAAKTYDIEVWVPSQNKYREISSCSNTEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR ++R + K F HTLNGSG+AVGR L+AI+ENY DGS+ IP L PYM Sbjct: 359 QARRAMIKFRAED-KKSYFVHTLNGSGLAVGRTLLAIIENYQQEDGSILIPEALVPYMGG 417 Query: 420 LAVIK 424 I+ Sbjct: 418 KTEIR 422 >gi|293572385|ref|ZP_06683367.1| seryl-tRNA synthetase [Enterococcus faecium E980] gi|291607545|gb|EFF36885.1| seryl-tRNA synthetase [Enterococcus faecium E980] Length = 423 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 202/426 (47%), Positives = 275/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQN E + L R ++ + + LDE R L+ K E+++ RN SA+I Sbjct: 1 MLDVKMMRQNIEEVQEKLMTRGVKKETLVEFMELDENRRKLLVKSEELKKYRNDVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q A E + + L+ E EV LK++ + +PN+P + VP+G+ Sbjct: 61 QLKRA--KEDASAKIAEMKEVGGNIKALDTEIAEVDEKLKQIATTLPNLPHDSVPVGSDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR + + + H+EI E L ++DF+R K++G+RF G A LERA+ Sbjct: 119 EDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI++ LP+ FT L+P+FRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNDEILDGADLPVYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+ILK+L L YRV++L TGD+GFSA KTYDLEVW+ Q+ YREISSCS C + Sbjct: 299 LEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD + K + + HTLNGSG+AVGR + AILENY N DGSVT+P L PYM Sbjct: 359 FQARRAMIRYRDNDGK-IHYAHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEALVPYMG 417 Query: 419 NLAVIK 424 NL VIK Sbjct: 418 NLKVIK 423 >gi|302872935|ref|YP_003841568.1| seryl-tRNA synthetase [Clostridium cellulovorans 743B] gi|307686551|ref|ZP_07628997.1| seryl-tRNA synthetase [Clostridium cellulovorans 743B] gi|302575792|gb|ADL49804.1| seryl-tRNA synthetase [Clostridium cellulovorans 743B] Length = 426 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 177/428 (41%), Positives = 262/428 (61%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR N + + AL R + + ++ LDE R ++ ++E+ + +RN+ SA Sbjct: 1 MLDLKRIRSNKDEIKAALSNRGEDFDLTVIDKVVELDESRRAILVEVENKKNQRNTESAL 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + G + +L +++ L+ + + ++ ++ IPN+P VP G Sbjct: 61 VPKLKKAG--EDASEVLQRMKSLSDEIKELDDKVRAIDEEIEYIMLRIPNIPNPLVPDGA 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N+ I+ G+ + + H+++G L ++DF+RA K++G+RF+ G A LERA Sbjct: 119 TDEDNLEIKRWGEPRKFENEPKAHWDLGVDLKILDFERAGKVTGSRFTFYRGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 L + +D H +GYTE+ PL+ +M GTGQ+PKF +D F + + IPT+EV + Sbjct: 179 LISYFLDTHVDINGYTEIMPPLMANRNSMKGTGQLPKFEEDAFTIQNNGYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN Y EI+ + LP++ + FRSEAGSAGRDTRG++RQHQF K ELV T++E S+ Sbjct: 239 TNYYRDEILVGEELPIKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKQEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E ++++ AE IL+ L L YR V +C GDLGF+A YDLEVW+ N Y EISSCS Sbjct: 299 EELDKLVKDAESILEGLGLPYRKVRICKGDLGFTAALKYDLEVWMPSYNKYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +YR+ +F HTLNGSG+AVGR AILENY N DGSVTIP VLR Y Sbjct: 359 EDFQARRANIKYREDAKAKPQFVHTLNGSGLAVGRTFAAILENYQNEDGSVTIPEVLRKY 418 Query: 417 MNNLAVIK 424 M + VIK Sbjct: 419 MGGVEVIK 426 >gi|293603800|ref|ZP_06686216.1| serine--tRNA ligase [Achromobacter piechaudii ATCC 43553] gi|292817798|gb|EFF76863.1| serine--tRNA ligase [Achromobacter piechaudii ATCC 43553] Length = 448 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 203/452 (44%), Positives = 276/452 (61%), Gaps = 31/452 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R++ + + LK R + +E L+ + + + + E ++ARRN+ + QIGQ Sbjct: 1 MLDPILLRKDLQTVVDRLKSRGVSFDTERFNDLESRRKAVQTETESLQARRNALAKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G A+ E+ + +L LE+E + + L L+ +PN+P VP+G SA+ Sbjct: 61 LKAKG--EDASAVMAESQAVPVRLKQLEEELAALQAPLNDLLMSVPNLPHASVPVGESAD 118 Query: 121 ENILIRSV--------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 EN+ +R G P+ +R+H IGE LG +DFD A KLSGARFS + G +A Sbjct: 119 ENVEVRRWLPGAAGADGNPPALAFEARDHVAIGEPLG-LDFDMAAKLSGARFSFMRGPIA 177 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------------ 220 L RAL QFM+DL T HGYTE P +V +YGTGQ+PKF DDMF Sbjct: 178 RLHRALSQFMLDLQTGTHGYTECYTPYIVNASTLYGTGQLPKFKDDMFAVSKGGGDDDPK 237 Query: 221 -------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + ++LI TSE++LT++ I + LPL+ T P FRSEAGS GRDTR Sbjct: 238 VDAAGNPYVREDQYLISTSEITLTSVARDTIQAAADLPLKLTAHTPCFRSEAGSGGRDTR 297 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 GM+RQHQF K E+V IT+ + S+ E M+ AE +L+ L L YRV+ LCTGD+GF + K Sbjct: 298 GMIRQHQFDKVEMVQITQPDQSYEALEDMVGHAERVLQLLGLPYRVMLLCTGDMGFGSAK 357 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 TYDLEVWL QN +REISS S C FQ+RRM +R+R+ K +F HTLNGSG+AVGR L Sbjct: 358 TYDLEVWLPAQNTWREISSVSNCETFQARRMQARFRNAQGK-PEFVHTLNGSGLAVGRAL 416 Query: 394 IAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +A+LEN+ ADGSV IP L+PYM L V+K Sbjct: 417 VAVLENHQQADGSVVIPEALQPYMGGLTVLKP 448 >gi|51245616|ref|YP_065500.1| seryl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|67461743|sp|Q6AMD2|SYS_DESPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|50876653|emb|CAG36493.1| probable seryl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 425 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 193/424 (45%), Positives = 271/424 (63%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML++++IR+N + + +R + + +D+K + ++E ++ +RN S +I Sbjct: 1 MLELRFIRENLDLVQERCNRRGMSDELITSFTEIDQKRLSTLAEVESLKNKRNVASKEIA 60 Query: 60 QAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + + L E + +++ IL+ +++ L K++ IPN+ ++VP+G Sbjct: 61 ELKRGTDEQKLEAEPLILEMRQIGDKIKILDTSLNQIQEDLDKVVMAIPNLCQDDVPVGN 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S ENI +R GKKP + H+E+GE +DF+RA K+SGARF++L G + L+RA Sbjct: 121 SDEENIELRVWGKKPEFTFTPKAHYELGEEADTIDFERAAKISGARFAILKGFASRLDRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSL 236 L FM+DLHT +HGYTEV P LV ++ TGQ+PKF +D+F +LIPT+EV + Sbjct: 181 LTNFMLDLHTQKHGYTEVLPPFLVNSASLTATGQLPKFKEDLFAIKDWDLYLIPTAEVPV 240 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ E I + LP+++T P FRSEAGS GRDTRG++RQHQF K ELV T E S Sbjct: 241 TNIHRDETIAEQDLPIKYTAFTPCFRSEAGSHGRDTRGLVRQHQFNKVELVKFTTPERST 300 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E +L AEE+L+ L LHYRVV LCTGDLGFS+ KTYD+EVWL GQ YREISSCS Sbjct: 301 DELESLLGDAEEVLQLLGLHYRVVKLCTGDLGFSSSKTYDIEVWLPGQQKYREISSCSNF 360 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYR K K HTLNGSG+AVGR L+A++ENY DGS+TIP VL+PY Sbjct: 361 LDFQARRGGIRYRPEGQKKSKLVHTLNGSGLAVGRTLLAVMENYQQEDGSITIPEVLKPY 420 Query: 417 MNNL 420 N Sbjct: 421 FENR 424 >gi|227550622|ref|ZP_03980671.1| serine--tRNA ligase [Enterococcus faecium TX1330] gi|227180246|gb|EEI61218.1| serine--tRNA ligase [Enterococcus faecium TX1330] Length = 422 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 274/425 (64%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQN E + L R ++ + + LDE R L+ K E+++ RN SA+I Sbjct: 1 MLDVKMMRQNIEEVQEKLMTRGVKKETLAEFMELDENRRKLLVKSEELKKYRNDVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q A E + + L+ E EV LK++ + +PN+P + VP+G+ Sbjct: 61 QLKRA--KEDASAKIAEMKEVGGNIKALDTEIAEVDEKLKQIATTLPNLPHDSVPVGSDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR + + + H+EI E L ++DF+R K++G+RF G A LERA+ Sbjct: 119 EDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI++ LP+ FT L+P+FRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNDEILDGADLPVYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+ILK+L L YRV++L TGD+GFSA KTYDLEVW+ Q+ YREISSCS C + Sbjct: 299 LEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD + K + + HTLNGSG+AVGR + A+LENY N DGSVT+P L PYM Sbjct: 359 FQARRAMIRYRDNDGK-IHYAHTLNGSGLAVGRTVAAVLENYQNEDGSVTVPEALVPYMG 417 Query: 419 NLAVI 423 NL VI Sbjct: 418 NLKVI 422 >gi|92117336|ref|YP_577065.1| seryl-tRNA synthetase [Nitrobacter hamburgensis X14] gi|122417947|sp|Q1QME2|SYS_NITHX RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|91800230|gb|ABE62605.1| seryl-tRNA synthetase [Nitrobacter hamburgensis X14] Length = 470 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 241/469 (51%), Positives = 299/469 (63%), Gaps = 45/469 (9%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP D ALK+R L P S +L++DEK R I E +ARRN+ S +IG+ Sbjct: 1 MHDIKAIRDNPAAFDAALKRRGLAPLSSSLLAIDEKRRAAILASEQAQARRNAASKEIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E + LK +P ++ L+K ++ IPN+PL+EVP GT + Sbjct: 61 AKKAKDEARAAKLMAEVAELKTSMPEMDAAAKAADEKLRKALAEIPNLPLDEVPDGTDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 NI GKK + H ++G ALG MDF+ A KLSGARF VL LA LERA+GQ Sbjct: 121 GNIQHHVFGKKRDYAFTPKPHEDLGGALGDMDFEAAAKLSGARFVVLKRGLARLERAIGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----------------- 223 F +D+HT EHGYTEV+ PLLVRD+AM+GT Q+PKFA+D F Sbjct: 181 FFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFAEDQFDFIKDRTISEQLEQTVVEID 240 Query: 224 ------------------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 D WLIPT+EV LTNL I++ K LPLRFT L P Sbjct: 241 QRKVRPGHFDMEQKVTPLSAPTRKDRLWLIPTAEVPLTNLVRESILDEKELPLRFTALTP 300 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRV 319 FR+EAG+AGRDTRGM+RQHQF K ELVSIT E S EHERMLSCAEE+L+RLDLHYRV Sbjct: 301 CFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDEHERMLSCAEEVLRRLDLHYRV 360 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCSTCGNFQSRRMNSRYRDPNSKSL 376 ++LCTGD+GF++ KTYD+EVW+ GQ YREISSCS CG+FQ+RRM++R R P+ K Sbjct: 361 MTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREISSCSVCGDFQARRMDARSRGPDGK-P 419 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +F HTLNGSG AVGR LIA++E Y ADGS+ +P VL PYM L VI K Sbjct: 420 RFVHTLNGSGTAVGRALIAVMETYQQADGSIAVPDVLLPYMGGLKVIAK 468 >gi|187479159|ref|YP_787184.1| seryl-tRNA synthetase [Bordetella avium 197N] gi|123514094|sp|Q2KWF5|SYS_BORA1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|115423746|emb|CAJ50296.1| seryl-tRNA synthetase [Bordetella avium 197N] Length = 449 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 202/451 (44%), Positives = 272/451 (60%), Gaps = 30/451 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R++ + + L+ R + +E L+ + +++ + E ++ARRN+ + QIGQ Sbjct: 1 MLDPILLRKDLQTVVDRLQSRGVSFDTERFNDLESRRKLVQTETEALQARRNALAKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G A+ E+ L QL LE+ + L +L+ +PN+P VP+G S++ Sbjct: 61 LKAKG--EDASAVMAESQALPGQLKQLEESLAMLQQQLNELLMSVPNLPHASVPVGASSD 118 Query: 121 ENILIRSV--------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 +N+ +R G R+H IGE LG +DFD A KLSGARFS + G +A Sbjct: 119 DNVEVRRWLPAEAGADGNPAPLGFAPRDHVAIGEPLG-LDFDTAAKLSGARFSFMRGQMA 177 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------- 222 L RAL QFM+DL T EHGYTE P +V +YGTGQ+PKF DDMF Sbjct: 178 RLHRALAQFMLDLQTGEHGYTECYTPYIVNSSTLYGTGQLPKFKDDMFFVTKGGGDDDPK 237 Query: 223 ---------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + ++LI TSE++LT++ I+ LPLR T P FRSEAGS GRDTR Sbjct: 238 VDEQGKPLAREDQYLISTSEITLTSVVRDTIVPGDVLPLRMTAHTPCFRSEAGSGGRDTR 297 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 GM+RQHQF K E+V + E S+ E+M+ AEE+L+RL L YRV+ LCTGD+GF A K Sbjct: 298 GMIRQHQFDKVEMVQVANPEQSYDALEQMVGHAEEVLRRLGLPYRVMLLCTGDMGFGAAK 357 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 TYDLEVWL QN +REISS S C +FQ+RRM +R+R +F HTLNGSG+AVGR L Sbjct: 358 TYDLEVWLPAQNTWREISSVSNCESFQARRMQARFRADAKSKPEFVHTLNGSGLAVGRAL 417 Query: 394 IAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 +A+LENY DGSV IP LRPYM + +K Sbjct: 418 VAVLENYQQEDGSVRIPEALRPYMGGIEQLK 448 >gi|28377392|ref|NP_784284.1| seryl-tRNA synthetase [Lactobacillus plantarum WCFS1] gi|38258545|sp|Q88Z60|SYS1_LACPL RecName: Full=Seryl-tRNA synthetase 1; AltName: Full=Serine--tRNA ligase 1; Short=SerRS 1; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase 1 gi|28270224|emb|CAD63125.1| serine--tRNA ligase [Lactobacillus plantarum WCFS1] Length = 423 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 273/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+ +++R NPE + L+ R ++P + + L LD++NR I K+E ++ ++N + QIG Sbjct: 1 MLNPKFVRNNPELVKTKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q ++ AL + L + E + EV L L PN+P ++VP+G Sbjct: 61 Q--SDPQSEAGQALIQQVKQLNGDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ +R G P+ + H+E+GE+LG++DFDRA K++GARF A LERA+ Sbjct: 119 DSNVEMRKHGDIPTFDFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDAGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FM+DLHT + GY E+ P LV + MYGTGQ PKF +D++ LIPT+EV LTN Sbjct: 179 SFMLDLHTQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVYTVESSGMTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI+ LP FT + P +RSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 239 YYANEILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+ L L Y V+ L TGD GFS+ KTYD+EVW+ Q +YREISSCS C + Sbjct: 299 LEKLTDNAEEVLRELGLAYHVIKLSTGDTGFSSAKTYDVEVWMPEQGVYREISSCSNCLD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR + ++ + HTLNGSG+AVGR + AILENY ADG+V IP VL+PYM+ Sbjct: 359 FQARRAMIRYRKADG-TVDYVHTLNGSGLAVGRTVAAILENYQQADGTVKIPKVLQPYMH 417 Query: 419 NLAVIK 424 + IK Sbjct: 418 GMTEIK 423 >gi|254480733|ref|ZP_05093980.1| seryl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214039316|gb|EEB79976.1| seryl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 432 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 189/432 (43%), Positives = 273/432 (63%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +RQ+PE++ +AL+KR E SLD + + + + + A R + S QIG Sbjct: 1 MLDIKAVRQDPENVALALEKRGFSFDIEQFKSLDARRKQADVQSQHLLAERKAASKQIGA 60 Query: 61 AIAEGNLSLVDALKNETST----LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + +G VD K + + + Q+ L E V + L++L+ +PN+P +EVP+G Sbjct: 61 LVGQGMS--VDDAKAQVNETLQKIAAQIDDLTNEAKVVQALLEELLLAVPNIPADEVPLG 118 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 S ++N+ + G S ++H +GE LG +DF+ A K++G+RF+V+ G +A + R Sbjct: 119 ASEDDNLEVARWGDPRSYDFEVKDHVALGEDLGQLDFETAGKITGSRFNVMYGDVARMHR 178 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEV 234 AL QFM++ H +HGY+E+ P +V +++ GTGQ+PKF +D+F G +LIPT+EV Sbjct: 179 ALIQFMLNQHIEKHGYSEIYVPYIVNSDSLRGTGQLPKFEEDLFKLEGEQGYYLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPL---RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +TN+ I E L +F P FRSEAGS GRDTRG++RQHQF K ELV R Sbjct: 239 PVTNVARDRIFEDAELGQDGVKFVCHTPCFRSEAGSYGRDTRGIIRQHQFEKVELVQFVR 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 S + + AE+IL+ L+L YR V LC GD+GFSA KTYDLEVWL Q+ YREIS Sbjct: 299 PSQSDDALDSLTGHAEKILQLLELPYRKVILCGGDIGFSARKTYDLEVWLPAQDTYREIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS+ G++Q+RRM +R+R+P S + HTLNGSG+AVGR L+AI+ENY ADGS+ +P Sbjct: 359 SCSSFGDYQARRMQARWRNPQSGKPELLHTLNGSGLAVGRTLVAIMENYQQADGSIEVPA 418 Query: 412 VLRPYMNNLAVI 423 VL+PYM + Sbjct: 419 VLQPYMGGATTL 430 >gi|254428921|ref|ZP_05042628.1| seryl-tRNA synthetase [Alcanivorax sp. DG881] gi|196195090|gb|EDX90049.1| seryl-tRNA synthetase [Alcanivorax sp. DG881] Length = 429 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 200/431 (46%), Positives = 276/431 (64%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +RQ+ E + AL KR + +LD K + + ++++A R S Q+G+ Sbjct: 1 MLDIRALRQDGEAIKTALTKRGYTLDLDAFAALDAKRKQADIRSQELQADRKKASKQVGE 60 Query: 61 AIAEGNLSLVDALKNETST----LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 I G V+ K++ + + +L + +++ + IPNVP + VP G Sbjct: 61 LIKSGMA--VEDAKSQVAETLQTIDAELDREVASAKAIQEEIREFLMGIPNVPQDAVPAG 118 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEA-LGLMDFDRATKLSGARFSVLTGHLAHLE 175 ++N+ +R G + R+H ++GEA G +DF+RA KLSGARFSV++G LA + Sbjct: 119 NDEDDNVEVRQWGTPKTLPFEPRDHVDVGEALDGGLDFERAAKLSGARFSVMSGGLARMH 178 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSE 233 RAL FM+D+H+ EHGY EV P LV EA+ GTGQ+PKFA+D+F +LIPT+E Sbjct: 179 RALIDFMLDMHSDEHGYQEVYVPFLVGPEALRGTGQLPKFAEDLFKMEGERELYLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL + EI+E+ ++P R+T P FRSEAGS G+DTRGM+RQHQF K ELV + R E Sbjct: 239 VPVTNLAADEILEADTMPRRYTCHTPCFRSEAGSHGKDTRGMIRQHQFEKVELVQMVRAE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S E + AE +L++LDL YRVV LC GDLGFS+ KTYD+EVWL Q YREISSC Sbjct: 299 ESDAALEALTGHAEAVLQKLDLPYRVVILCGGDLGFSSSKTYDIEVWLPSQQRYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S ++QSRRM +R+R+P + + HTLNGS +AVGR L+AILENY N DGSVT+P L Sbjct: 359 SNFQDYQSRRMQARWRNPETGKPELVHTLNGSALAVGRTLVAILENYQNEDGSVTVPEAL 418 Query: 414 RPYMNNLAVIK 424 R YM L +K Sbjct: 419 RSYMRGLERLK 429 >gi|260584327|ref|ZP_05852074.1| serine--tRNA ligase [Granulicatella elegans ATCC 700633] gi|260157845|gb|EEW92914.1| serine--tRNA ligase [Granulicatella elegans ATCC 700633] Length = 426 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 203/428 (47%), Positives = 271/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R + E + + L+ R +E Q E + LDEK R LI K E ++ RN+ + +I Sbjct: 1 MLDMKRVRDHFEEVVVGLQNRGVERQVVEELRDLDEKRRELILKTEQLKQYRNTVTEEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N A E + E + + EV L+ + S +PN+ +VP+G Sbjct: 61 QLKR--NKEDASAKIAEMKQVGEDVKATDALLAEVEEKLEYIASRLPNIAAADVPVGEDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+ IR G + H+E+ EAL ++DF+R K+SG+RF G A LERA+ Sbjct: 119 NENVEIRREGTPRVFDFEPKPHWEVAEALDILDFERGAKVSGSRFLYYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLT 237 +MIDLH +HGYTE+ P LV +++MYGTGQ PKF +D+F LIPT+EV LT Sbjct: 179 NYMIDLHVEKHGYTEMITPYLVNEQSMYGTGQFPKFKEDVFQINDERNLTLIPTAEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y++EI+E LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V E SF Sbjct: 239 NYYANEILEEAQLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFATPETSFE 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+M AE++L+ L L +R + LCTGD+GFSA KTYD+EVW+ Q+ YREISSCS C Sbjct: 299 ELEKMTDNAEDVLRGLGLPFRTIVLCTGDMGFSASKTYDVEVWIPAQDTYREISSCSNCV 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RYR + ++ HTLNGSG+AVGR + AILENY ADGSVTIP VL PYM Sbjct: 359 DFQARRAKIRYRQAETGKIELLHTLNGSGLAVGRTVAAILENYQEADGSVTIPEVLVPYM 418 Query: 418 NNLAVIKK 425 + I K Sbjct: 419 GGVTKITK 426 >gi|89892754|ref|YP_516241.1| seryl-tRNA synthetase [Desulfitobacterium hafniense Y51] gi|122484260|sp|Q252J5|SYS_DESHY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|89332202|dbj|BAE81797.1| seryl-tRNA synthetase [Desulfitobacterium hafniense Y51] Length = 421 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 190/424 (44%), Positives = 268/424 (63%), Gaps = 5/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R NPE + ALKKR+ + L +E+ R L+ ++E ++A+RN+ S ++G+ Sbjct: 1 MLDLKFVRTNPEVVKEALKKRNSNVSLDAFLEQEEERRKLLFEVESLKAKRNTVSEEVGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + L E + +++ LE + E+ S++ ++ IPN+P E VP+G Sbjct: 61 RKKHG--EDAEQLILEMREVGQKVKNLEDKLGEIEQSMEAVLYEIPNIPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R+ G S H+EIGE L ++DF RA K++GARF+ G A LERAL Sbjct: 119 ANVEVRTWGTPRSFDFEPLAHYEIGEKLDILDFARAGKVTGARFTFYKGLGAKLERALIS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+D H S GY EV P +V +M GTGQ+PKF +D F + IPT+EV +TN+ Sbjct: 179 FMLDRH-SAKGYVEVLPPYMVHRNSMIGTGQLPKFEEDAFKVAGTDYFLIPTAEVPVTNM 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+E++ LP+ + FR+EAGSAGRDTRG++RQHQF K ELV E+S+ E Sbjct: 238 YREEILEAEQLPIHHCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFAFPENSYEEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AE IL+ L+L YRV++L TGDLGF++ KTYDLEVWL N YREISSCS +F Sbjct: 298 ESLTRDAESILQELELPYRVMALSTGDLGFTSAKTYDLEVWLPSFNTYREISSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R +F HTLNGSG+A+GR + AILENY ADG V +P L+PY+ Sbjct: 358 QARRANIRFRRAPKAKPEFLHTLNGSGLAIGRTVSAILENYQEADGRVRVPKALQPYL-G 416 Query: 420 LAVI 423 + I Sbjct: 417 VEYI 420 >gi|77414886|ref|ZP_00790994.1| seryl-tRNA synthetase [Streptococcus agalactiae 515] gi|77159061|gb|EAO70264.1| seryl-tRNA synthetase [Streptococcus agalactiae 515] Length = 425 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 202/427 (47%), Positives = 282/427 (66%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + + LD K R L+ K E+ +A+RN SA I Sbjct: 1 MLDLKRIRTDFDAVAKKLAMRGVDQETLTTLKELDIKRRELLIKAEEAKAQRNVASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL + ++ E +V ++L+ +++ +PN P ++VP+G Sbjct: 61 QAKR--NKENADEQIAAMQTLSADIKAIDAELADVDANLQSMVTVLPNTPADDVPLGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE+LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPREFDFETKAHWDLGESLGILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 SFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSPFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD ++ HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEVDGKVRLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 N+ +IK Sbjct: 418 NIDIIKP 424 >gi|158522755|ref|YP_001530625.1| seryl-tRNA synthetase [Desulfococcus oleovorans Hxd3] gi|238686901|sp|A8ZXS1|SYS_DESOH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|158511581|gb|ABW68548.1| seryl-tRNA synthetase [Desulfococcus oleovorans Hxd3] Length = 425 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 198/425 (46%), Positives = 268/425 (63%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +++R+ + AL R+ +P + L D + ++ +IE +R +RN S I Sbjct: 1 MLDSRFVREQADRARQALAHRNEDPVMIDAFLGYDTARKDILAEIEALRHKRNVASDTIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q G + D + ++ LE E L+ IPN+P VPIG Sbjct: 61 QMKKAGQTA--DEPIAAMREVSAKIKELEVLLAENQEKSDALLMRIPNIPHASVPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ R VG P+ R H EIGEALG+ DF RA K++GARF + G A +ERAL Sbjct: 119 SANVTEREVGTPPAFDFAPRPHEEIGEALGIFDFARAAKIAGARFPLYKGAGALMERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D+HT+EHGYTE PL+V + M GTGQ+PKF +D+F G +LIPT+EV +TN Sbjct: 179 NFMLDIHTTEHGYTECLPPLMVNAKTMTGTGQLPKFEEDLFKLERWGFYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +++ EI+ LP+++T P FRSEAGS G+DT+G++RQHQF K ELV E S+ E Sbjct: 239 IFADEILNEADLPIKYTAYTPCFRSEAGSYGKDTKGLIRQHQFNKVELVKFAHPEHSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++L+ AE IL+RL L YRV++LC+GD+GFSA KTYD+EVW QN YREISSCS + Sbjct: 299 LEKLLADAETILQRLGLAYRVITLCSGDMGFSAAKTYDIEVWFPAQNRYREISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ P K F HTLNGSG+AVGR L AILEN+ +G+V IP LRPYM Sbjct: 359 FQARRANIRFKRPGQKGTGFVHTLNGSGLAVGRTLAAILENFQTKEGAVEIPDTLRPYMR 418 Query: 419 NLAVI 423 N+AV+ Sbjct: 419 NMAVL 423 >gi|269926095|ref|YP_003322718.1| seryl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269789755|gb|ACZ41896.1| seryl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 423 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 175/424 (41%), Positives = 258/424 (60%), Gaps = 5/424 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD++ IR++P+ + LK+R + + +++LD + R ++ ++E +R+ RN S QI + Sbjct: 3 LDLRLIREHPDIVKAGLKRRGSDAPIDEVIALDSRRRKILTEVEGLRSERNKVSKQIPRI 62 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + ++L + + Q+ LE E EV S L L+ IPN+P EVP G ++ Sbjct: 63 ---SDKTERESLISRMRQVGNQIESLESELREVESKLHTLLLQIPNIPDPEVPDGKDESD 119 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 N+++R G+ +R H+EIGE LG++DF + K+SG+RF VL G A L+RAL + Sbjct: 120 NVVVRQHGEPRELPFDARPHWEIGERLGIIDFAQGQKISGSRFYVLHGDGARLQRALITW 179 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLY 240 M+DL + GY EV P +V++E ++ + +P F D M+ D W IPT+E LT ++ Sbjct: 180 MLDLR-RQEGYKEVYPPAIVKEETLWASAHLPDFEDTMYHDVEDDVWFIPTAEAPLTGIH 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +EII +SLP+R+ P FR E SAG+D RG+ R HQF K E+ T EDS E Sbjct: 239 MNEIIPVESLPIRYAAYTPCFRREKMSAGKDVRGIKRGHQFDKVEMYHYTLPEDSPKHLE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 ++ AE+ +L L RVV LCTGDLGF + +T+D+EVW G + E+SSCS G+FQ Sbjct: 299 ELVKHAEDTAIKLGLTCRVVELCTGDLGFKSRRTFDIEVWSPGVREWLEVSSCSNVGDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR R++ ++ HTLNGSG+A+ R +IAILENY DGSV IP VLRPYM Sbjct: 359 ARRAGIRFKRTPKSETEYVHTLNGSGLALPRVMIAILENYQQPDGSVVIPEVLRPYMGGQ 418 Query: 421 AVIK 424 VIK Sbjct: 419 EVIK 422 >gi|254555575|ref|YP_003061992.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|254044502|gb|ACT61295.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1] Length = 423 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 272/426 (63%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+ +++R NPE + L+ R ++P + + L LD++NR I K+E ++ ++N + QIG Sbjct: 1 MLNPKFVRNNPELVKTKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q ++ AL + L + E + EV L L PN+P ++VP+G Sbjct: 61 Q--SDPQSEAGQALIQQVKQLNGDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ +R G P+ + H+E+GE+LG++DFDRA K++GARF A LERA+ Sbjct: 119 DSNVEMRKHGDIPTFDFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDAGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FM+DLHT + GY E+ P LV + MYGTGQ PKF +D++ LIPT+EV LTN Sbjct: 179 SFMLDLHTQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVYTVESSGMTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI+ LP FT + P +RSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 239 YYANEILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L L L Y V+ L TGD GFS+ KTYD+EVW+ Q +YREISSCS C + Sbjct: 299 LEKLTDNAEEVLHELGLAYHVIKLSTGDTGFSSAKTYDVEVWMPEQGVYREISSCSNCLD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR + ++ + HTLNGSG+AVGR + AILENY ADG+V IP VL+PYM+ Sbjct: 359 FQARRAMIRYRKSDG-TVDYVHTLNGSGLAVGRTVAAILENYQQADGTVKIPKVLQPYMH 417 Query: 419 NLAVIK 424 + IK Sbjct: 418 GMTEIK 423 >gi|241668826|ref|ZP_04756404.1| seryl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877358|ref|ZP_05250068.1| seryl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843379|gb|EET21793.1| seryl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 426 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 185/428 (43%), Positives = 283/428 (66%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I+ N E + L R + + + K + L ++ ++++++RN+ S +IG+ Sbjct: 1 MLDAKYIKDNLEEVAEKLATRGYQFDIAEFKAQEAKRKDLQERTQELQSQRNTISKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++G + + + + ++L ++EK+ ++ + + +PN+P ++VP+G + Sbjct: 61 RKSKG--EDASDIFAKVNDINDELKVIEKKLKDLQDCINNTLLSMPNLPADDVPVGKDES 118 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN+ I+ G +++H +IGE L ++DF A K++G+RF VL +A L RAL Sbjct: 119 ENVEIKKWGTPREFHPEAQAKDHADIGEILNMIDFKAAAKITGSRFVVLKSKIAKLHRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+D+HT +HGY E+ P +V ++++YGTGQ+PKF++D+F LIPT+EV + Sbjct: 179 TQFMLDMHTEKHGYEELYVPYMVNNDSLYGTGQLPKFSEDLFKLEGDFEYSLIPTAEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI++++SLP +T P FRSEAGS GRDT+G++RQHQF K ELV IT + Sbjct: 239 TNLVRDEILDTESLPRYYTAHTPCFRSEAGSYGRDTKGLIRQHQFEKVELVHITIADKGE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + S AE++L++L+L YRVV LCTGD+GFSA KTYDLEVW+ QN YREISSCS C Sbjct: 299 ESLELLTSHAEKVLQKLNLPYRVVKLCTGDMGFSAKKTYDLEVWIPSQNTYREISSCSWC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+++P+ K + HTLNGSG+AVGR L+AI+ENY DGS+ IP L Y Sbjct: 359 GDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIENYQQEDGSIMIPEALINY 418 Query: 417 MNNLAVIK 424 M ++VIK Sbjct: 419 MGGISVIK 426 >gi|77409224|ref|ZP_00785933.1| seryl-tRNA synthetase [Streptococcus agalactiae COH1] gi|77172167|gb|EAO75327.1| seryl-tRNA synthetase [Streptococcus agalactiae COH1] Length = 425 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 202/427 (47%), Positives = 282/427 (66%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++ + + LD K R L+ K E+ +A+RN SA I Sbjct: 1 MLDLKRIRTDFDAVAKKLATRGVDQETLTTLKELDIKRRELLIKSEEAKAQRNVASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D TL + ++ E +V ++L+ +++ +PN P ++VP+G Sbjct: 61 QAKR--NKENADEQITAMQTLSADIKAIDAELADVDANLQSMVTVLPNTPADDVPLGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G ++ H+++GE+LG++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPREFDFEAKAHWDLGESLGILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 SFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSPFVLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EII+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 238 YYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 298 LEKMTANAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD ++ HTLNGSG+AVGR + AILENY N DGSVTIP VLRPYM Sbjct: 358 FQARRAQIRYRDEVDGKVRLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMG 417 Query: 419 NLAVIKK 425 N+ +IK Sbjct: 418 NIDIIKP 424 >gi|295425887|ref|ZP_06818566.1| serine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] gi|295064429|gb|EFG55358.1| serine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] Length = 462 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 190/438 (43%), Positives = 269/438 (61%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D K R +K+ E ++A RN S +IG Sbjct: 28 MLDIKVIRENLDWAKDKLATRGIKPEELDEVVAIDAKRRDALKQSEQLKAERNEVSKKIG 87 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A N + ++ L+ E ++ + ++ +PN P + PIG Sbjct: 88 EAKR--NKEDASDAIKSMKEVSSKIKDLDNEIRDLSEKQEYILLRLPNFPADSDPIGPDD 145 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H++IG L ++D++RA+K+SGARF G A LERA+ Sbjct: 146 SYNEEVRKWNEPTKFNFKPKAHWDIGTDLDILDWNRASKVSGARFVFYKGAGALLERAVF 205 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T E GYTE+ P LV D +M GTGQ PKF +D++ LIPT Sbjct: 206 NFFLDENTKE-GYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 264 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + EII + LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 265 AEVPLVNYFRDEIIHGEKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCK 324 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS+ + E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 325 PEDSWDQLEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPYQDKYREIS 384 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR + RYRD N K L HTLNGSG+AVGRC+ AILENY N DGSVT+P Sbjct: 385 SCSNCTDFQARRAHIRYRDENGK-LHLVHTLNGSGLAVGRCVAAILENYQNEDGSVTVPD 443 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 444 VLVPYMNGMKKITKEDSL 461 >gi|268317520|ref|YP_003291239.1| seryl-tRNA synthetase [Rhodothermus marinus DSM 4252] gi|262335054|gb|ACY48851.1| seryl-tRNA synthetase [Rhodothermus marinus DSM 4252] Length = 426 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 171/426 (40%), Positives = 250/426 (58%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD+Q IRQ P+ + A++ + + + +L+LD ++R + ++++ R R+N+ + QI Sbjct: 1 MLDLQRIRQEPDRVREAIRTKGIGDPELVDRVLALDAEHRRTLTELQEARHRQNTLARQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 GQ + EG AL E + LKE + LE E E+ +L+ L+ IPN+P VP+G Sbjct: 61 GQLMREGRRDEAQALIEENTRLKEHIKTLEARERELGEALEALLLEIPNIPHPSVPVGRG 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+++ G P+ H+E+ GL+DF+R K++G+ F G A L+RAL Sbjct: 121 PEDNVVLHEEGCPPAFDFEPLPHWELATRHGLIDFERGAKVTGSGFPFYVGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLT 237 QF +DL +E GY E+ PL V ++ GTGQ+P D M+ + IPT+EV +T Sbjct: 181 VQFFLDLAVNEGGYVEIQPPLFVNADSARGTGQLPDKEDLMYVIERDGLYPIPTAEVPVT 240 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y EI+E LP++F +P FR EAGS G+D RG+ R HQF K ELV + S+ Sbjct: 241 NYYRDEILEESRLPIKFCAYSPCFRREAGSYGKDVRGLNRLHQFDKVELVQFVHPDTSYD 300 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E++ AE L+ L L YR V +CT + GF+ K YDLEVW AGQ + E+SS S Sbjct: 301 ALEQLREDAERPLRLLGLPYRRVLMCTAETGFTQAKKYDLEVWSAGQQRWLEVSSISNFE 360 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R+R + +F HTLNGSG+A+ R + A+LE+Y ADGS+ IP VLRPY Sbjct: 361 DFQARRARIRFRPADGGRPRFVHTLNGSGLALPRVVAALLEHYQQADGSIIIPEVLRPYT 420 Query: 418 NNLAVI 423 I Sbjct: 421 -GFDRI 425 >gi|295798138|emb|CAX68980.1| Seryl-tRNA synthetase [uncultured bacterium] Length = 423 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 172/426 (40%), Positives = 261/426 (61%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +RQ PE + ALK R+ + + L +D R LI++IE +RA +N + ++ Sbjct: 1 MLDIKLVRQQPELVRQALKNRNYKFDLDDFLKIDVDLRSLIQQIESLRAEQNKINQEVPL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 I + E+ +++++ L + K +PN+P E +P+G + Sbjct: 61 LIKAKQDASAK--IEESRQIRKKVDELNVKLAANQEEWDKRYQRLPNIPHESLPVGAPSA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ VG KP ++H E+ +L ++DF+R KL+G+ F + G A LERAL Sbjct: 119 NRVVKE-VGNKPQFSFKPKDHIELASSLDIIDFERGAKLAGSNFVLYKGQGALLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+ +HT+EHGY E+ P+LV ++M+GTGQ+P +DM+ D +LIPT+EV LTN+ Sbjct: 178 FMLQVHTTEHGYKEMWPPVLVNPDSMFGTGQLPNLEEDMYKLKNDDLYLIPTAEVPLTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI++ + LP + T + FR EAGS G+DTRG++R HQF K ELV + EDS+ E Sbjct: 238 YREEILDEEVLPHKITAYSSCFRREAGSYGKDTRGLVRLHQFDKVELVKFVKPEDSYNEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E +LS A +IL +L L YR++ L TGD+ F++ K YD+E++ G + + E+SSCS +F Sbjct: 298 ELLLSDACDILDKLKLPYRILLLATGDISFASSKCYDIELYAPGMDRWLEVSSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYRD S+ +F HTLNGSGVA+ R +IA+LENY DG++++P L PY+ Sbjct: 358 QARRANIRYRDKKSQKTRFVHTLNGSGVALPRLVIALLENYQQEDGTISVPEALVPYLYG 417 Query: 420 LAVIKK 425 I K Sbjct: 418 RKKIAK 423 >gi|167626395|ref|YP_001676895.1| seryl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189083569|sp|B0TYM9|SYS_FRAP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|167596396|gb|ABZ86394.1| Serine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 426 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 185/428 (43%), Positives = 282/428 (65%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I+ N E + L R + + + K + L ++ ++++++RN+ S +IG+ Sbjct: 1 MLDAKYIKDNLEEVAEKLATRGYQFDIAEFKAQEAKRKDLQERTQELQSQRNTISKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++G + + + + ++L ++EK ++ + + +PN+P ++VP+G + Sbjct: 61 RKSKG--EDASDIFAKVNDINDELKVIEKVLKDLQDCINNTLLSMPNLPADDVPVGKDES 118 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN+ I+ G +++H +IGE L ++DF A K++G+RF VL +A L RAL Sbjct: 119 ENVEIKKWGTPREFHPEAQAKDHADIGEILNMIDFKAAAKITGSRFVVLKSKIAKLHRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+D+HT +HGY E+ P +V ++++YGTGQ+PKF++D+F LIPT+EV + Sbjct: 179 TQFMLDMHTEKHGYEELYVPYMVNNDSLYGTGQLPKFSEDLFKLEGDFEYSLIPTAEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI++++SLP +T P FRSEAGS GRDT+G++RQHQF K ELV IT + Sbjct: 239 TNLVRDEILDTESLPRYYTAHTPCFRSEAGSYGRDTKGLIRQHQFEKVELVHITIADKGE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + S AE++L++L+L YRVV LCTGD+GFSA KTYDLEVW+ QN YREISSCS C Sbjct: 299 ESLELLTSHAEKVLQKLNLPYRVVKLCTGDMGFSAKKTYDLEVWIPSQNTYREISSCSWC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+++P+ K + HTLNGSG+AVGR L+AI+ENY DGS+ IP L Y Sbjct: 359 GDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIENYQQEDGSIMIPEALINY 418 Query: 417 MNNLAVIK 424 M ++VIK Sbjct: 419 MGGISVIK 426 >gi|171463819|ref|YP_001797932.1| seryl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238689067|sp|B1XVE1|SYS_POLNS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|171193357|gb|ACB44318.1| seryl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 436 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 185/439 (42%), Positives = 260/439 (59%), Gaps = 18/439 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D Q +R++ + L R + E +L+ + + L + E+++A+RN S IG Sbjct: 1 MIDPQLLRKDIAAVAARLATRKFQLDVEKFNALESERKSLQTRTEELQAKRNQLSKAIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + + E + + + + + + + IPN+P E VP Sbjct: 61 KKGKGEGAAAE--MAEVTQVNADMESGSSRLAVLQAEISDFLMGIPNLPDESVPASKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN ++ G++P ++H ++G LG +DF+ A K+SG+RF VL G +A L RAL Q Sbjct: 119 ENKEVKRWGEQPIFDFEVKDHVDLGGPLG-LDFEVAAKISGSRFIVLKGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-------------- 226 FMID H +EH Y EV AP +V +M GTGQ+PKF +D+F Sbjct: 178 FMIDTHATEHQYQEVYAPYMVNAASMRGTGQLPKFEEDLFKVPRQMGGEDGNGEAKTENF 237 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LIPT+EV +TNL EI+ + +LP++F P FRSEAGS GRD RGM+RQHQF K EL Sbjct: 238 YLIPTAEVPVTNLVRDEIVNTDNLPMKFVAHTPCFRSEAGSYGRDVRGMIRQHQFDKVEL 297 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 V IT+ EDS E + AE IL+ L+L YR V LCTGD+GF + KTYDLEVW+ QN Sbjct: 298 VQITKPEDSMQALEDLTGHAERILELLELPYRKVLLCTGDMGFGSTKTYDLEVWVPSQNA 357 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 YREISSCS+ G+FQ+RRM +R++ K + HTLNGSG+AVGR L+A+LEN DGS Sbjct: 358 YREISSCSSMGDFQARRMQARFKVGQGK-PELVHTLNGSGLAVGRALVALLENKQQVDGS 416 Query: 407 VTIPTVLRPYMNNLAVIKK 425 + IP L+PY+ L V+K Sbjct: 417 IAIPKALQPYLGGLEVLKP 435 >gi|126700456|ref|YP_001089353.1| seryl-tRNA synthetase [Clostridium difficile 630] gi|115251893|emb|CAJ69728.1| Seryl-tRNA synthetase 1 (Seryl-tRNA(Ser/Sec) synthetase 1) (Serine--tRNA ligase 1) (SerRS 1) [Clostridium difficile] Length = 423 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 183/426 (42%), Positives = 278/426 (65%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + + A+++R + + ++ LD++ R +++++E ++ N+ S I Sbjct: 1 MLDIKRIRENLDCIKKAMERRGEKDFNLDEVVKLDDERRKILQEVEVMKNELNTASKNIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 I EG + +K L +++ ++++ EV ++ L+ IPNVP EVP G + Sbjct: 61 NLIKEGKDVENEKIK--LKELSDKIKVIDQNLKEVEDKMEYLLMRIPNVPHPEVPQGETD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R+ GK + S+ H+EIG LG++DF+ A+K++G+RF++ G A LERAL Sbjct: 119 EDNVEVRTWGKTTTFDFESKAHWEIGTELGILDFETASKITGSRFTLYKGLGARLERALL 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 F +D +T +GYTEV P + + GTGQ+PKF +DMF ++IPTSEV LTN Sbjct: 179 NFYLDTNTKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGLDYFMIPTSEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++++EI++ + LP+ +T P FRSEAGSAGRDTRG++RQHQF K E+V I E+S+ E Sbjct: 239 IHANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKIVAPEESYNE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ + AE +L+ L+L YRVV +CTGDLGF+A YD+EVW+ N Y EISSCS C + Sbjct: 299 LEKLTNNAETMLQLLNLPYRVVKICTGDLGFTASFKYDVEVWMPSYNRYVEISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R++ ++ HTLNGSG+A+GR + ILENY DGSV +P VLR YM Sbjct: 359 FQARRAGIRFKRDKDSKTEYVHTLNGSGLAIGRSVAVILENYQQEDGSVVVPEVLRAYM- 417 Query: 419 NLAVIK 424 ++VIK Sbjct: 418 GVSVIK 423 >gi|114800440|ref|YP_760631.1| seryl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] gi|123027986|sp|Q0C0W2|SYS_HYPNA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|114740614|gb|ABI78739.1| seryl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] Length = 432 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 218/432 (50%), Positives = 284/432 (65%), Gaps = 10/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M DI+ IR NP+ A +R L + IL LD + R +D + RN+NS I Sbjct: 1 MFDIRAIRDNPDAFRNAWNRRKSGLGSVVDDILKLDAQWREATTAKQDAESARNANSKLI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 GQA A+ + + L + K + + E +L L+ +PN+PL+EVP G+ Sbjct: 61 GQAKAKKDEAEAARLMALVAEAKTTMEQAGEAEDNARKALDDLLMGLPNLPLDEVPEGSD 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEA------LGLMDFDRATKLSGARFSVLTGHLA 172 + N+ + G +P I+ ++H ++GEA +MDF+ A ++SGARF L G L Sbjct: 121 EHGNVEQHTWG-EPKLINDPKDHADLGEALKGQGGFPMMDFEAAARMSGARFVALRGKLT 179 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 LERAL FM+DL T+EHGY E+S P+LVRD+A+YGTGQ+PKFA+D+F TT WL PT+ Sbjct: 180 RLERALANFMLDLQTTEHGYEEMSVPVLVRDQALYGTGQLPKFAEDLFRTTVDHWLTPTA 239 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EVSLTNL +I+++ LPLRFT P FRSEAGSAGRDT+GM+RQHQF K ELVSI Sbjct: 240 EVSLTNLVREQILDAAQLPLRFTAHTPCFRSEAGSAGRDTKGMIRQHQFNKVELVSIVAN 299 Query: 293 EDS-FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E E ERM CAEE+LKRL+L +R + LCTGD+G A KTYDLEVWL QN YREIS Sbjct: 300 EAEGLAELERMTGCAEEVLKRLELPFRRMLLCTGDMGAGARKTYDLEVWLPSQNTYREIS 359 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS CG+FQ+RRM++RYR ++ HTLNGSG+AVGR L+A+LENY NADGS+T+P Sbjct: 360 SCSYCGDFQARRMDARYRPEPKAKPEYVHTLNGSGLAVGRTLVAVLENYQNADGSITVPK 419 Query: 412 VLRPYMNNLAVI 423 L PYM + VI Sbjct: 420 ALVPYMGGVEVI 431 >gi|320355012|ref|YP_004196351.1| seryl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] gi|320123514|gb|ADW19060.1| seryl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] Length = 423 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 193/420 (45%), Positives = 269/420 (64%), Gaps = 2/420 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+++++R+N + + R ++PQ + D + + ++E ++ +RN+ S I Sbjct: 1 MLELRFVRENLDLVRSKSLLRGVDPQLIDRFAETDRRRLATLAEVEGLKNQRNTVSKTIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 G + L E + +++ L+ + L+ ++ IPN+ + VP G Sbjct: 61 GFKQSGRNDEAEPLIVEMRAVSDRIKELDVVLAGIEEELQDIVMSIPNLCDDSVPQGRDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +NI I+ G+ P+ R H+EIGE LG++DFD A++L+GARFS+L G + L RAL Sbjct: 121 QDNIEIKRWGEIPTFAFPPRPHWEIGEQLGILDFDTASRLAGARFSLLKGFGSRLSRALV 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 F +DLHT HGYTEV P +V +AM GTGQ+PKF +D+F WLIPT+EV +TN Sbjct: 181 NFFLDLHTQRHGYTEVLPPFMVNSKAMTGTGQLPKFKEDLFKLEGWDLWLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +++ E I+ LPL++T P FRSEAGS G+DTRG++RQHQF K ELV T E S+ E Sbjct: 241 IHAGETIDGAELPLKYTAYTPCFRSEAGSYGKDTRGLIRQHQFEKVELVKFTAPETSWEE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E +L+ AE L+ L+L YRV++LCTGDLGFSA KTYD+EVWL GQN YREISSCS + Sbjct: 301 LESLLADAEAALQLLELPYRVITLCTGDLGFSAAKTYDIEVWLPGQNCYREISSCSNFLD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR K + HTLNGSG+AVGR L+AILENY ADG+V +P+VL PY N Sbjct: 361 FQARRAGIRYRAKGEKKSRLVHTLNGSGLAVGRTLLAILENYQQADGTVRLPSVLEPYFN 420 >gi|69247503|ref|ZP_00604373.1| Seryl-tRNA synthetase, class IIa [Enterococcus faecium DO] gi|257878632|ref|ZP_05658285.1| seryl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257881297|ref|ZP_05660950.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257890514|ref|ZP_05670167.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257893090|ref|ZP_05672743.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|258615286|ref|ZP_05713056.1| seryl-tRNA synthetase [Enterococcus faecium DO] gi|260558212|ref|ZP_05830408.1| seryl-tRNA synthetase [Enterococcus faecium C68] gi|293563863|ref|ZP_06678294.1| seryl-tRNA synthetase [Enterococcus faecium E1162] gi|293569174|ref|ZP_06680480.1| seryl-tRNA synthetase [Enterococcus faecium E1071] gi|294623744|ref|ZP_06702572.1| seryl-tRNA synthetase [Enterococcus faecium U0317] gi|314940146|ref|ZP_07847326.1| seryl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314943022|ref|ZP_07849826.1| seryl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314948140|ref|ZP_07851536.1| seryl-tRNA synthetase [Enterococcus faecium TX0082] gi|314953446|ref|ZP_07856364.1| seryl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314993814|ref|ZP_07859151.1| seryl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314998160|ref|ZP_07863042.1| seryl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|68194828|gb|EAN09303.1| Seryl-tRNA synthetase, class IIa [Enterococcus faecium DO] gi|257812860|gb|EEV41618.1| seryl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257816955|gb|EEV44283.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257826874|gb|EEV53500.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257829469|gb|EEV56076.1| seryl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260075386|gb|EEW63692.1| seryl-tRNA synthetase [Enterococcus faecium C68] gi|291588143|gb|EFF19985.1| seryl-tRNA synthetase [Enterococcus faecium E1071] gi|291596698|gb|EFF27921.1| seryl-tRNA synthetase [Enterococcus faecium U0317] gi|291604174|gb|EFF33677.1| seryl-tRNA synthetase [Enterococcus faecium E1162] gi|313587872|gb|EFR66717.1| seryl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313591737|gb|EFR70582.1| seryl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313594549|gb|EFR73394.1| seryl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313598222|gb|EFR77067.1| seryl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313640651|gb|EFS05231.1| seryl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|313645394|gb|EFS09974.1| seryl-tRNA synthetase [Enterococcus faecium TX0082] Length = 423 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 204/426 (47%), Positives = 276/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +RQN E + L R ++ + + LDE R L+ K E+++ RN SA+I Sbjct: 1 MLDVKMMRQNIEEVQEKLMTRGVKKETLAEFMELDENRRKLLVKSEELKKYRNDVSAEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q A E + + L+ E EV LK++ + +PN+P + VP+GT Sbjct: 61 QLKRA--KEDASAKIAEMKEVGGNIKALDTEIAEVDEKLKQIATTLPNLPHDSVPVGTDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR + + + H+EI E L ++DF+R K++G+RF G A LERA+ Sbjct: 119 EDNVEIRRWSEPRTFAFEPKPHWEIAENLDILDFERGAKVAGSRFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FM+D H EHGYTE+ P +V +AM+GTGQ PKF +D+F LIPT+EV LTN Sbjct: 179 NFMLDQHIYEHGYTEMITPYIVNSKAMFGTGQFPKFKEDVFQLENTDLTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EI++ LP+ FT L+P+FRSEAGSAGRDTRG++R HQF K E+V + E S+ E Sbjct: 239 YYNDEILDGADLPIYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDVEHSYEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE+ILK+L L YRV++L TGD+GFSA KTYDLEVW+ Q+ YREISSCS C + Sbjct: 299 LEKMTADAEDILKKLHLPYRVMALSTGDMGFSAAKTYDLEVWIPAQDTYREISSCSNCED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD + K + +THTLNGSG+AVGR + AILENY N DGSVT+P L PYM Sbjct: 359 FQARRAMIRYRDNDGK-IHYTHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEALVPYMG 417 Query: 419 NLAVIK 424 NL VIK Sbjct: 418 NLKVIK 423 >gi|161485645|ref|NP_560930.2| seryl-tRNA synthetase [Clostridium perfringens str. 13] gi|168206221|ref|ZP_02632226.1| seryl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|168210470|ref|ZP_02636095.1| seryl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|168214044|ref|ZP_02639669.1| seryl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|168217726|ref|ZP_02643351.1| seryl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|169343428|ref|ZP_02864431.1| seryl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|182625424|ref|ZP_02953197.1| seryl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|30173188|sp|Q8XPE9|SYS_CLOPE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|169298514|gb|EDS80600.1| seryl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|170662379|gb|EDT15062.1| seryl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|170711415|gb|EDT23597.1| seryl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|170714531|gb|EDT26713.1| seryl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|177909421|gb|EDT71873.1| seryl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|182380223|gb|EDT77702.1| seryl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 425 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 169/421 (40%), Positives = 260/421 (61%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ +R N E + AL R + + +++LDE+ R ++ +E ++ +RN SA+ Sbjct: 1 MLDLKKLRSNTEEVKKALSNRGEDFDVNVIDEVIALDEERRKILVDVEALKKQRNEVSAE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G V + E + +++ + + E+ + ++ IPN+P VP G Sbjct: 61 IPKRKKAG--EDVTEVMAEMREIGDKIKADDAKVAELNDKINYIMLRIPNIPNPAVPEGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N+ I+ G+ + H+++G L L+DF+R K++G+RF+V G A LER+ Sbjct: 119 TDEDNVEIKRWGEPTKFNFEPKAHWDLGTDLDLLDFERGGKVAGSRFTVYKGMGARLERS 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT E+GYTEV P +V ++M GTGQ+PKF +D F + + IPT+EV + Sbjct: 179 IINYFLDKHTFENGYTEVLPPYMVNRDSMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y +E +E LP++ + FR+EAGSAGRDTRG++RQHQF K ELV + E S+ Sbjct: 239 TNMYRNETLEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E ++++ AE +L+ L L YR+V +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 EELDKLVQDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +Y++ + +F HTLNGSGVA+GR + AILENY DGSV IP L+ Y Sbjct: 359 EDFQARRANIKYKNSPKEKPQFVHTLNGSGVAIGRTVAAILENYQQEDGSVVIPEALKEY 418 Query: 417 M 417 M Sbjct: 419 M 419 >gi|124267877|ref|YP_001021881.1| seryl-tRNA synthetase [Methylibium petroleiphilum PM1] gi|166222744|sp|A2SJA7|SYS_METPP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|124260652|gb|ABM95646.1| seryl-tRNA synthetase [Methylibium petroleiphilum PM1] Length = 432 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 199/434 (45%), Positives = 271/434 (62%), Gaps = 15/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ E + L+ R E +L+ + + + + E+++ARRNS S Q Sbjct: 1 MLDINLLRKDLEGVVARLETRKSPQPFLDVERFTALEAERKAIQTRTEELQARRNSLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ A+G A+ E + + L + + S L L+ +PN+P VP+G Sbjct: 61 IGQLKAKG--EDTAAVMAEVGGIGDGLKASAERLEVIQSELNALLMALPNLPQAGVPVGA 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N+ +R G+ + ++H ++G LG +DF+ KLSGARFS L G +A L RA Sbjct: 119 DEHANVEVRRWGQPRALDFAPKDHVDLGAPLG-LDFETGAKLSGARFSFLRGPVARLHRA 177 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLI 229 L QFM+D+ T EHGYTE P +V E + GTGQ+PKF DMF T ++LI Sbjct: 178 LAQFMLDVQTQEHGYTECYTPYIVNREVLEGTGQLPKFEADMFWVTRGGDDDEATTQYLI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 TSE+SLTN +++ + LP++ T +P FRSEAGSAGRDTRGM+RQHQF K E+V I Sbjct: 238 STSEISLTNSVREQVLAADQLPIKLTAHSPCFRSEAGSAGRDTRGMIRQHQFDKVEMVQI 297 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T E S E M+ AE +L++L+L YRV++LCTGD+GF A KTYDLEVWL QN YRE Sbjct: 298 TTAEQSDAALEAMVGHAEAVLQKLELPYRVITLCTGDMGFGAAKTYDLEVWLPAQNTYRE 357 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS C FQ+RRM +RY+ K+ + HTLNGSG+AVGR L+A+LEN NADGS+TI Sbjct: 358 ISSCSNCEAFQARRMQTRYKTAQGKN-ELVHTLNGSGLAVGRALVAVLENGQNADGSITI 416 Query: 410 PTVLRPYMNNLAVI 423 P LRPY+ L + Sbjct: 417 PAALRPYLGGLERL 430 >gi|157363097|ref|YP_001469864.1| seryl-tRNA synthetase [Thermotoga lettingae TMO] gi|166987318|sp|A8F3R6|SYS_THELT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157313701|gb|ABV32800.1| seryl-tRNA synthetase [Thermotoga lettingae TMO] Length = 424 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 206/420 (49%), Positives = 279/420 (66%), Gaps = 3/420 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ IR+ P+ + AL+KR+ E + + +LSLD + R L +I +RA+RNS S + Sbjct: 1 MIDIRLIREKPDFVKKALEKRNYEKKMVDDLLSLDAQFRELTNQINQLRAQRNSISKMVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + G ++ L E + Q+ +E + E+ ++KL+ +PN+P + VP G Sbjct: 61 QAKSSGKTEEIENLTEEGKKIGRQIDSIEDQLKEIKVQMEKLMLLVPNIPDDSVPEGKDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N IR G + + H+++G +LGLMDFDRA KLSG+RF+V+ G A LERAL Sbjct: 121 TSNREIRKWGDPKKFDYNPQAHWDLGPSLGLMDFDRAAKLSGSRFTVMYGMFAKLERALT 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D+HT EHGYTEV P +V+ E M TGQ+PKF ++ + D +LIPT+EV L Sbjct: 181 NFMLDMHTKEHGYTEVWLPHIVKRETMTITGQLPKFEEEAYRIEADDLFLIPTAEVPLVA 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L S+EI+E K LPL +T P +R EAGS G+D RGM+RQHQF K ELV IT E SF + Sbjct: 241 LRSNEILEEKDLPLLYTAYTPCYRREAGSYGKDVRGMIRQHQFDKVELVWITTPERSFED 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E ++S AEE+L+RL+L YRV+ LC+GDLGF A KTYDLEVWL N Y+EISSCS + Sbjct: 301 LETLVSHAEEVLRRLELPYRVIQLCSGDLGFGAAKTYDLEVWLPSYNSYKEISSCSNDTD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR + K + F HTLNGSGVAVGR L+AI+ENY ADG + +P L+PY+ Sbjct: 361 FQARRGNIRYRRKDGK-ISFVHTLNGSGVAVGRTLVAIIENYQRADGRIDVPKALQPYLG 419 >gi|18143671|dbj|BAB79720.1| serine-tRNA ligase [Clostridium perfringens str. 13] Length = 427 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 169/421 (40%), Positives = 260/421 (61%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ +R N E + AL R + + +++LDE+ R ++ +E ++ +RN SA+ Sbjct: 3 MLDLKKLRSNTEEVKKALSNRGEDFDVNVIDEVIALDEERRKILVDVEALKKQRNEVSAE 62 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G V + E + +++ + + E+ + ++ IPN+P VP G Sbjct: 63 IPKRKKAG--EDVTEVMAEMREIGDKIKADDAKVAELNDKINYIMLRIPNIPNPAVPEGE 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N+ I+ G+ + H+++G L L+DF+R K++G+RF+V G A LER+ Sbjct: 121 TDEDNVEIKRWGEPTKFNFEPKAHWDLGTDLDLLDFERGGKVAGSRFTVYKGMGARLERS 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT E+GYTEV P +V ++M GTGQ+PKF +D F + + IPT+EV + Sbjct: 181 IINYFLDKHTFENGYTEVLPPYMVNRDSMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPV 240 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y +E +E LP++ + FR+EAGSAGRDTRG++RQHQF K ELV + E S+ Sbjct: 241 TNMYRNETLEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSY 300 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E ++++ AE +L+ L L YR+V +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 301 EELDKLVQDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 360 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +Y++ + +F HTLNGSGVA+GR + AILENY DGSV IP L+ Y Sbjct: 361 EDFQARRANIKYKNSPKEKPQFVHTLNGSGVAIGRTVAAILENYQQEDGSVVIPEALKEY 420 Query: 417 M 417 M Sbjct: 421 M 421 >gi|300769636|ref|ZP_07079520.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300492789|gb|EFK27973.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 434 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 193/426 (45%), Positives = 273/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+ +++R NPE + L+ R ++P + + L LD++NR I K+E ++ ++N + QIG Sbjct: 12 MLNPKFVRNNPELVKTKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQIG 71 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q ++ AL + L + E + EV L L PN+P ++VP+G Sbjct: 72 Q--SDPQSEAGQALIQQVKQLNGDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDE 129 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ +R G P+ + H+E+GE+LG++DFDRA K++GARF A LERA+ Sbjct: 130 DSNVEMRKHGDIPTFDFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDAGALLERAVY 189 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FM+DLHT + GY E+ P LV + MYGTGQ PKF +D++ LIPT+EV LTN Sbjct: 190 SFMLDLHTQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVYTVESSGMTLIPTAEVPLTN 249 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI+ LP FT + P +RSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 250 YYANEILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDE 309 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+ L L Y V+ L TGD GFS+ KTYD+EVW+ Q +YREISSCS C + Sbjct: 310 LEKLTDNAEEVLRELGLAYHVIKLSTGDTGFSSAKTYDVEVWMPEQGVYREISSCSNCLD 369 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR + ++ + HTLNGSG+AVGR + AILENY ADG+V IP VL+PYM+ Sbjct: 370 FQARRAMIRYRKADG-TVDYVHTLNGSGLAVGRTVAAILENYQQADGTVKIPKVLQPYMH 428 Query: 419 NLAVIK 424 + IK Sbjct: 429 GMTEIK 434 >gi|160946180|ref|ZP_02093391.1| hypothetical protein PEPMIC_00142 [Parvimonas micra ATCC 33270] gi|158447703|gb|EDP24698.1| hypothetical protein PEPMIC_00142 [Parvimonas micra ATCC 33270] Length = 421 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 198/426 (46%), Positives = 274/426 (64%), Gaps = 6/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR N E + +L R + +L LDEK R +I ++E+ +AR+N S Q+ + Sbjct: 1 MLDIKRIRTNKEEVIESLNSRFGNYNIDKVLELDEKRREIIFEVENKKARQNEVSKQVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G V L E L +++ L+ + ++ ++K + IPN P +++PIG S Sbjct: 61 LKKDGI--DVSELFKEMKALSDEIKELDVKVKDLDEEIRKELLSIPNTPNKDIPIGKSDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR + + H+++G L ++DF+RA K+SG+RFSV G A LERAL Sbjct: 119 DNVEIRKFLEPKKFDFEVKAHWDLGVDLDILDFERAVKISGSRFSVFKGLGAKLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FM+DLH+ + GY EV P+L+ +MYGTGQ+PKF DDMF +L PT+EV +TNL Sbjct: 179 FMLDLHSGQ-GYEEVGVPVLINRNSMYGTGQLPKFEDDMFYVPSKDLFLAPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++EI+E + LP +T FR EAGSAGRDTRG++R HQF K E+V E+S+ E Sbjct: 238 LANEILEFEKLPTYYTAFTYCFRQEAGSAGRDTRGLIRNHQFDKVEMVKFVNPENSYDEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AEEILK L++ YRVV LCTGD+GFS+ KTYD+EVW+ Y EISSCS +F Sbjct: 298 EKLTNDAEEILKLLEIPYRVVCLCTGDIGFSSAKTYDIEVWMPSYGRYVEISSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYRD + K +KF HTLNGSG+AVGR A+LENY DGS+ IP VLR YM Sbjct: 358 QARRANIRYRDTDGK-VKFVHTLNGSGLAVGRTFAAVLENYQREDGSIEIPYVLRKYM-G 415 Query: 420 LAVIKK 425 L I+K Sbjct: 416 LDEIRK 421 >gi|90961171|ref|YP_535087.1| seryl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|301299680|ref|ZP_07205935.1| serine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] gi|122449395|sp|Q1WVB3|SYS_LACS1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|90820365|gb|ABD99004.1| Seryl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|300852720|gb|EFK80349.1| serine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 425 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 202/428 (47%), Positives = 277/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR N E L R ++P+ + +++ D+K R L+ + E+++ RN S I Sbjct: 1 MLDIKDIRLNTEEYKRRLGTRGVKPEEIDELVAEDKKRRELLVETENLKKERNEVSEAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + ++ L+++ +V ++K + + +PN+P +P+G Sbjct: 61 QAKR--NKEDASEQIQAMRKVGTKIKELDEKLAKVEENVKSMAAHLPNLPNPTIPVGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ + VG + H++IGE LG++DFDRA K+SGARF G A LERA+ Sbjct: 119 DSNVELYKVGTPRKFDFEPKAHWDIGEDLGILDFDRAAKVSGARFVFYKGLGAKLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H E GYTEV P +V+ ++MYGTGQ PKF D ++ + LIPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYIVKSKSMYGTGQFPKFKDQVYQVNGEDMTLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I ++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V T+ EDS+ E Sbjct: 238 YYREEVIPTEDLPVYFTALSPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKPEDSYNE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M A I+++L L Y V++L TGD+GFSA T+DLEVW+ Q+ YREISSCS C + Sbjct: 298 LEKMTKNAGNIMEKLGLPYHVITLSTGDMGFSAAMTHDLEVWMPAQDTYREISSCSNCED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR +YRD N K L++ HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRARIQYRDENGK-LQYVHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMQ 416 Query: 419 NLAVIKKE 426 L VIKKE Sbjct: 417 GLEVIKKE 424 >gi|331702090|ref|YP_004399049.1| Seryl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] gi|329129433|gb|AEB73986.1| Seryl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] Length = 427 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 190/431 (44%), Positives = 275/431 (63%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR++P+ L R +P+ + ++ D K R LI + E ++A+RN+ S QI Sbjct: 1 MLDIKKIRKDPDFTKEKLATRGTKPETIDELVGYDAKRRDLIVESESLKAKRNAVSDQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N N+ + +++ L+++ +V L + +PN+P ++VP+ + Sbjct: 61 QKKR--NKEDATEAINQMKQVGQRIKELDEQLRQVEEDEHNLAAHLPNIPHDDVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +R +G+ PS + H+EIGE LG++DF+RA K+SG+RF G A LERA+ Sbjct: 119 EGSVELRKIGQIPSFDFEPKHHWEIGENLGILDFERAAKVSGSRFVYYIGDGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD---MFCTTDGRWLIPTSEVSL 236 F +D +T GYTEV P +V +++MYGTGQ PKF ++ LIPT+EV L Sbjct: 179 NFYLDQNT-AAGYTEVIPPYMVNNDSMYGTGQFPKFLENKSGYEIQDSDLTLIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y +E+I ++ LP+ T L+P+FRSEAGSAGRDT+G++R HQF K E+V T+ EDS+ Sbjct: 238 VNYYRNEVIPTEKLPVSVTALSPAFRSEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE L++L L Y V++L T D+ F+A T+DLEVW Q+ YREISSCS C Sbjct: 298 KALEEITHQAEVNLQKLGLAYHVITLTTSDMSFTAAMTHDLEVWFPAQDKYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + +YRD K L F HTLNGSG+AVGR + AILENY N DGSVTIP VLRPY Sbjct: 358 TDFQARRAHIQYRDDEGK-LHFVHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPY 416 Query: 417 MNNLAVIKKEH 427 M+ + I+K++ Sbjct: 417 MHGMTKIEKQN 427 >gi|309792285|ref|ZP_07686757.1| seryl-tRNA synthetase [Oscillochloris trichoides DG6] gi|308225826|gb|EFO79582.1| seryl-tRNA synthetase [Oscillochloris trichoides DG6] Length = 422 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 170/425 (40%), Positives = 272/425 (64%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+ P+ + L++R +P Q + IL++DE+ R LIK++E ++A RN+ S +I Sbjct: 1 MLDIKLIREQPDLVRAGLRRRGDDPAQVDAILAVDERRRSLIKEVEVLKAERNAVSKEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + +A + + +++ L+++ + + ++L+ +PN+P +VP G++ Sbjct: 61 KL---RDATEREAKISAMRAVGDRIAELDQQANAAEAEFQRLLLWLPNLPHADVPDGSTE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+++R G+ + H+E+GEALG++DF+R KLSG+RF VL G + L+RAL Sbjct: 118 HDNVVVRVEGQPRQFDFTPKPHWELGEALGIIDFERGVKLSGSRFFVLKGAGSRLQRALI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +M+DLHT +HGY+E++ P +V+++ + GTG +P+F +++F LIPT+EV +TN Sbjct: 178 TWMLDLHTQQHGYSEITPPYVVKEDVLVGTGNLPRFGENLFRIEGADLTLIPTAEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY EI+E+ LP+ P +R+E SAGRD RG+ R +QF K E+V E S+ E Sbjct: 238 LYRDEILEASDLPIFHVAYTPCWRNEQMSAGRDVRGIKRVYQFDKVEMVKFVTPETSYAE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ++ AE++ K L + YR++ LCT DLG +A YDLE+W G + E+SSCS Sbjct: 298 LLTLVDNAEDVCKALKIPYRLLKLCTADLG-TATMKYDLEMWAPGVEEWLEVSSCSNFEA 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +QSRR N RYR +F HTLNGSG+A+ R +IAI+ENY DG++ +P VLRPYM Sbjct: 357 YQSRRANLRYRPSPGAKPEFLHTLNGSGLALPRVMIAIMENYQQPDGTIVVPEVLRPYMG 416 Query: 419 NLAVI 423 + VI Sbjct: 417 GVEVI 421 >gi|110801909|ref|YP_697363.1| seryl-tRNA synthetase [Clostridium perfringens SM101] gi|122956934|sp|Q0SWW9|SYS_CLOPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|110682410|gb|ABG85780.1| serine--tRNA ligase [Clostridium perfringens SM101] Length = 425 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 169/421 (40%), Positives = 260/421 (61%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ +R N E + AL R + + +++LDE+ R ++ +E ++ +RN SA+ Sbjct: 1 MLDLKKLRSNTEEVKKALSNRGEDFDVNVIDEVIALDEERRKILVDVEALKKQRNEVSAE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G V + E + +++ + + E+ + ++ IPN+P VP G Sbjct: 61 IPKRKKAG--EDVTEVMAEMREIGDKIKADDAKVAELNDKINYIMLRIPNIPNPAVPEGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N+ I+ G+ + H+++G L L+DF+R K++G+RF+V G A LER+ Sbjct: 119 TDEDNVEIKRWGEPTKFNFEPKAHWDLGTDLDLLDFERGGKIAGSRFTVYKGMGARLERS 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT E+GYTEV P +V ++M GTGQ+PKF +D F + + IPT+EV + Sbjct: 179 IINYFLDKHTFENGYTEVLPPYMVNRDSMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y +E +E LP++ + FR+EAGSAGRDTRG++RQHQF K ELV + E S+ Sbjct: 239 TNMYRNETLEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E ++++ AE +L+ L L YR+V +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 EELDKLVQDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +Y++ + +F HTLNGSGVA+GR + AILENY DGSV IP L+ Y Sbjct: 359 EDFQARRANIKYKNSPKEKPQFVHTLNGSGVAIGRTVAAILENYQQEDGSVVIPEALKEY 418 Query: 417 M 417 M Sbjct: 419 M 419 >gi|30248204|ref|NP_840274.1| seryl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] gi|46577223|sp|Q820S5|SYS_NITEU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|30180089|emb|CAD84091.1| tRNA synthetases, class-II (G, H, P and S):Seryl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] Length = 437 Score = 413 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 202/438 (46%), Positives = 272/438 (62%), Gaps = 18/438 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N +++ L +R + SL+ + + + + ++A+RNS S QIG Sbjct: 1 MLDIQQLRSNLQNIITRLAQRGYDFPVADFESLESQRKSVQTLTQTLQAKRNSASKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G V + E + + ++L E + V + L++L+ IPN+P + VP G N Sbjct: 61 ARQRG--EDVSLIMAEVANMGDELKQAENQLEAVQTRLQQLLLEIPNLPHDSVPAGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H IGE L L+DF+ A KLSGARFS+L G LA L RAL Q Sbjct: 119 DNLEMRRWGTPKTFDFPVQDHASIGEHLKLIDFETAAKLSGARFSLLKGGLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------------- 225 FM+D HT E+GY E+ P LV + + GTGQ+PKF D+F G Sbjct: 179 FMLDTHTQENGYNEIYVPYLVNADCLRGTGQLPKFEQDLFAVRSGAQEEADNPDKTGPAG 238 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 LIPT+EV LTN+ + I+ ++LPL+F P FRSEAGS GRDTRG++RQHQF K E Sbjct: 239 LHLIPTAEVPLTNIVRNTIVPLENLPLQFVAHTPCFRSEAGSYGRDTRGLIRQHQFDKVE 298 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 LV IT E S E ++ AE+IL++L+L YRV+ LCTGD+GFSA KTYD+EVWL Q Sbjct: 299 LVQITHPEKSHEALESLVGHAEKILQKLELPYRVMLLCTGDMGFSAAKTYDIEVWLPAQQ 358 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISSCS C FQ+RRM +R+R + + HTLNGSG+AVGR L+AILENY N DG Sbjct: 359 AYREISSCSNCEAFQARRMQARFR-KGQEKPELLHTLNGSGLAVGRTLVAILENYQNEDG 417 Query: 406 SVTIPTVLRPYMNNLAVI 423 S+TIP +LR YM + I Sbjct: 418 SITIPEILRAYMGGIERI 435 >gi|93006674|ref|YP_581111.1| seryl-tRNA synthetase [Psychrobacter cryohalolentis K5] gi|122415030|sp|Q1Q9M6|SYS_PSYCK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|92394352|gb|ABE75627.1| seryl-tRNA synthetase [Psychrobacter cryohalolentis K5] Length = 428 Score = 413 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 193/430 (44%), Positives = 271/430 (63%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R + L L R + +++ + + L K E++++RRN+ + Q+G Sbjct: 1 MIDPKLLRGDLTDLQQQLATRGYTLDIAFWQNIENERKSLQVKTEELQSRRNTGAKQVGV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L E ++ ++ E E + + + IPN+P +VP+GTS + Sbjct: 61 LKKSG--EDASELLAEMQSVSGEIKTAEDELRTLQERISQAAMQIPNIPAADVPVGTSED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H IGE LG++DF+ ATKL+G+RF+VL G LA + RAL Q Sbjct: 119 DNVEVRKWGTPREFDFEIKDHTHIGETLGMLDFEAATKLTGSRFNVLKGQLAQMHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-------RWLIPTSE 233 FM++ HT ++GYTE P +V E++ GTGQ+PKF DD+F T+ +LIPT+E Sbjct: 179 FMLNTHTIKYGYTETYVPYIVNSESLKGTGQLPKFEDDLFKLTNHTNNDDMDFYLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL E ++ K LPL+FT P FRSEAGS GRDTRG++RQHQF K E+V+I E Sbjct: 239 VPMTNLVRGERLDIKELPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFEKVEMVNIATAE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E M AE IL++L+L YR V LCTGD+GF+A KTYD+EVWL Q YREISSC Sbjct: 299 QSDELLEAMTGQAEFILQQLNLPYRTVKLCTGDMGFAAQKTYDIEVWLPSQETYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S CG+FQ+RRM +R +D K HTLNGSG+AVGR L+A++EN+ NADGS+TIP VL Sbjct: 359 SNCGDFQARRMGTRVKD--GKQTSLAHTLNGSGLAVGRTLLAVMENHQNADGSITIPEVL 416 Query: 414 RPYMNNLAVI 423 RP+M +I Sbjct: 417 RPFMGGADII 426 >gi|198282690|ref|YP_002219011.1| seryl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667554|ref|YP_002424882.1| seryl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226701652|sp|B7J4C9|SYS_ACIF2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238689968|sp|B5EMC5|SYS_ACIF5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|198247211|gb|ACH82804.1| seryl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519767|gb|ACK80353.1| seryl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 421 Score = 413 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 203/425 (47%), Positives = 274/425 (64%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R +PE + L +RH + +LD++ + L ++E +R RN S QIGQ Sbjct: 1 MLDPSLLRSSPETVAAGLARRHFTLDVAALNALDQQRKALQIQLEQLRNARNEASRQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +G + ++ ++ E++ LE+ + L +PN+P + VP G Sbjct: 61 ARRQGLDTGA--MQAAAASNGEEIKTLEQSLERTLAEWDTLTIGLPNIPQDSVPDGRDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+++R G + R+H E+GEALG++DF +L+G RF VL G A LERAL Q Sbjct: 119 DNVVLRHWGSPSTFAFPPRDHVELGEALGIIDFAAGARLAGTRFVVLRGAGARLERALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNL 239 FM+DLHT+EHGYTE++ P L +++YGTGQ+PKF +D+F D +LIPT+EV LTNL Sbjct: 179 FMLDLHTTEHGYTEIAPPFLANADSLYGTGQLPKFEEDLFALRDDPYYLIPTAEVPLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 EI+ SLP RF P FR EAG+ GRDTRGM+RQHQF K ELV I R EDS H Sbjct: 239 LRGEIVA--SLPQRFCAYTPCFRREAGAYGRDTRGMIRQHQFDKVELVQIVRPEDSAQAH 296 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + + AE++L+ L+L YRV +LC GDLGFSA KTYDLEVWL GQN YREISSCS +F Sbjct: 297 ETLTAHAEKVLQLLELPYRVTALCAGDLGFSAAKTYDLEVWLPGQNQYREISSCSNFESF 356 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+ RYR + K + HTLNGSG+AVGR L+A+LEN+ ADG + IP LRPY+ Sbjct: 357 QARRLQLRYRAEDGK-PQLVHTLNGSGLAVGRTLVALLENHQQADGRIRIPAALRPYLGG 415 Query: 420 LAVIK 424 + VI+ Sbjct: 416 MTVIQ 420 >gi|227892467|ref|ZP_04010272.1| seryl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|227865760|gb|EEJ73181.1| seryl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|300214095|gb|ADJ78511.1| Seryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase) (SerRS) [Lactobacillus salivarius CECT 5713] Length = 425 Score = 413 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 202/428 (47%), Positives = 277/428 (64%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR N E L R ++P+ + +++ D+K R L+ + E+++ RN S I Sbjct: 1 MLDIKDIRLNTEEYKRRLGTRGVKPEEIDELVAEDKKRRELLVETENLKKERNEVSEAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + ++ L+++ +V ++K + + +PN+P +P+G Sbjct: 61 QAKR--NKEDASEQIQAMRKVGTKIKELDEKLAKVEENVKSMAAHLPNLPNPTIPVGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ + VG + H++IGE LG++DFDRA K+SGARF G A LERA+ Sbjct: 119 DSNVELYKVGTPRKFDFEPKAHWDIGEDLGILDFDRAAKVSGARFVFYKGLGAKLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D H E GYTEV P +V+ ++MYGTGQ PKF D ++ + LIPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYIVKAKSMYGTGQFPKFKDQVYQVNGEDMTLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y E+I ++ LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V T+ EDS+ E Sbjct: 238 YYREEVIPTEDLPVYFTALSPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKPEDSYNE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M A I+++L L Y V++L TGD+GFSA T+DLEVW+ Q+ YREISSCS C + Sbjct: 298 LEKMTKNAGNIMEKLGLPYHVITLSTGDMGFSAAMTHDLEVWMPAQDTYREISSCSNCED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR +YRD N K L++ HTLNGSG+AVGR + AILENY N DGSVTIP LRPYM Sbjct: 358 FQARRARIQYRDENGK-LQYVHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMQ 416 Query: 419 NLAVIKKE 426 L VIKKE Sbjct: 417 GLEVIKKE 424 >gi|110798993|ref|YP_694487.1| seryl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|123050143|sp|Q0TV53|SYS_CLOP1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|110673640|gb|ABG82627.1| seryl-tRNA synthetase [Clostridium perfringens ATCC 13124] Length = 425 Score = 413 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 169/421 (40%), Positives = 259/421 (61%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ +R N E + AL R + + +++LDE+ R ++ +E ++ +RN SA+ Sbjct: 1 MLDLKKLRSNTEEVKKALSNRGEDFDVNVIDEVIALDEERRKILVDVEALKKQRNEVSAE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G V + E + ++ + + E+ + ++ IPN+P VP G Sbjct: 61 IPKRKKAG--EDVTEVMAEMREIGGKIKADDAKVAELNDKINYIMLRIPNIPNPAVPEGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N+ I+ G+ + H+++G L L+DF+R K++G+RF+V G A LER+ Sbjct: 119 TDEDNVEIKRWGEPTKFNFEPKAHWDLGTDLDLLDFERGGKVAGSRFTVYKGMGARLERS 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT E+GYTEV P +V ++M GTGQ+PKF +D F + + IPT+EV + Sbjct: 179 IINYFLDKHTFENGYTEVLPPYMVNRDSMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y +E +E LP++ + FR+EAGSAGRDTRG++RQHQF K ELV + E S+ Sbjct: 239 TNMYRNETLEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E ++++ AE +L+ L L YR+V +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 EELDKLVQDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +Y++ + +F HTLNGSGVA+GR + AILENY DGSV IP L+ Y Sbjct: 359 EDFQARRANIKYKNSPKEKPQFVHTLNGSGVAIGRTVAAILENYQQEDGSVVIPEALKEY 418 Query: 417 M 417 M Sbjct: 419 M 419 >gi|255527097|ref|ZP_05393985.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296187885|ref|ZP_06856278.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255509199|gb|EET85551.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296047506|gb|EFG86947.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 426 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 179/428 (41%), Positives = 268/428 (62%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR+N E + ALK R + + +L LDEK R ++ ++E ++ ++N +S Q Sbjct: 1 MLDLKRIRKNKEEIKKALKNRGEHFEETIIDEVLDLDEKRRRILIEVEVLKNKKNQDSIQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ EG S + +E L +++ + E EV + ++ ++ IPN+P VP G Sbjct: 61 IGKLKKEGKSSDF--IVSEIKNLTDKIKQFDIELSEVDNKIQYIMLRIPNIPHISVPEGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++N+ IR K + H++IG L ++DF+R K++G+RF+ G A LERA Sbjct: 119 TDSDNVEIRRWSKPTKFEFTPKAHWDIGADLNILDFERGGKVAGSRFTFYRGLGARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSL 236 + + +D+HT +HGY E+ P +V +M GTGQ+PKF +D F +LIPT+EV + Sbjct: 179 VITYFLDVHTEKHGYEELFPPYMVNSSSMVGTGQLPKFEEDTFRISNSDLFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN Y E+++ + LP++ + FRSE+ SAGRDTRG++RQ QF K ELV T+ E S+ Sbjct: 239 TNFYRDEVLKGEDLPIKHVAYSACFRSESSSAGRDTRGLVRQRQFNKVELVKFTKPEQSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AEEIL+ L L YRVV +C GDLGF+A YD+EVW+ N + EISSCS Sbjct: 299 DELEKLTNDAEEILQGLCLPYRVVKICKGDLGFTAALKYDIEVWMPSYNRFVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +Y++ + ++ HTLNGSG+A GR + AILENY DGSV IP VLR Y Sbjct: 359 EDFQARRANIKYKETSKDKPQYVHTLNGSGLAAGRTVAAILENYQQPDGSVIIPEVLRQY 418 Query: 417 MNNLAVIK 424 M + I+ Sbjct: 419 MGDKEKIR 426 >gi|88812898|ref|ZP_01128142.1| seryl-tRNA synthetase [Nitrococcus mobilis Nb-231] gi|88789820|gb|EAR20943.1| seryl-tRNA synthetase [Nitrococcus mobilis Nb-231] Length = 425 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 203/422 (48%), Positives = 262/422 (62%), Gaps = 4/422 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R N E L L++R E + L+E+ R L + ++ RN S IGQ Sbjct: 1 MLDPKELRNNREALAGQLRRRGFELDTARYGELEERRRQLQMDTQALQNERNRQSRAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L E + L E+L K H + L +L IPNVP VP G Sbjct: 61 AKAAG--EDIEPLLAEVAQLGERLGAANKALHAIQVELHRLQLEIPNVPHASVPDGADET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI IR G +P+ + R+H E+G MDF+ KL+ ARF VL G A L RAL Q Sbjct: 119 DNIEIRRWGDQPTFDYAPRDHVELGALSREMDFEAGAKLATARFVVLRGRFAQLHRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 M+DLHT EHGY EV P LV + M GTGQ+PKF +D+F + +LIPT+EV +TN Sbjct: 179 LMLDLHTQEHGYEEVHVPYLVNPQTMQGTGQLPKFEEDLFRVAAENPLFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L I+E+ LPLRF P FRSEAGS G+DTRGM+R HQF K ELV + R E S+ Sbjct: 239 LVRECIVEADVLPLRFVCHTPCFRSEAGSYGKDTRGMIRLHQFDKVELVQVVRSEASYGA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + S AE++L+ L L YRVV+LC GD+GF+A KTYDLEVWL GQ YREISSCS C Sbjct: 299 LEELTSHAEKVLQLLGLPYRVVALCAGDMGFAAAKTYDLEVWLPGQQRYREISSCSNCEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R+P + + HTLNGSG+A+GRCL+A+LENY ADG V +P L+PY+ Sbjct: 359 FQARRMQARWRNPETGRPEPVHTLNGSGLAIGRCLVAVLENYQEADGRVRVPAALQPYLG 418 Query: 419 NL 420 Sbjct: 419 GR 420 >gi|260072736|gb|ACX30632.1| seryl-tRNA synthetase [uncultured bacterium ARCTIC96BD-19] Length = 431 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 194/434 (44%), Positives = 277/434 (63%), Gaps = 13/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+ + +R N + + LK+R+ + L+ + +I+ + ++++ RN+ S IGQ Sbjct: 1 MLESKLLRGNIDFVVEQLKRRNFSFDVDEFNELENQRKIVQVQTQELQNLRNTKSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L +E S L E+L + + E+ S + +++ IPN+P VP G S + Sbjct: 61 AKASG--ENIEPLLDEVSELGEKLDSAKDQLQEIQSKINEIVLSIPNIPHPSVPEGNSED 118 Query: 121 EN--ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N + + ++H +IGE G +DF A K+SG+RF V+TG LA L+RAL Sbjct: 119 DNDEVFSWPENGPATLDFKPKDHVDIGEMHG-IDFAAAAKISGSRFVVITGKLAKLQRAL 177 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------RWLIP 230 QFM+D HT ++GYTE AP LV +++ GTGQ+PKF D+F T +LIP Sbjct: 178 TQFMLDHHTEKNGYTETYAPYLVNSDSLMGTGQLPKFEADLFKTHLHGEEGEARALYLIP 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV +TNL I++ LP++F P FRSEAGS G+DTRG++RQHQF K ELV I+ Sbjct: 238 TAEVPVTNLVRDSILKESELPVKFVAHTPCFRSEAGSYGKDTRGLIRQHQFEKVELVQIS 297 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + +S+ + + + AE IL+ L+L YR V LCTGDLGFS+ KTYDLEVWL GQN YREI Sbjct: 298 KPSESYKILDELTNDAEGILQLLELPYRKVVLCTGDLGFSSAKTYDLEVWLPGQNAYREI 357 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS +FQ+RRM R+++P + +F HTLNGSG+AVGR L+A++ENY N DGS+TIP Sbjct: 358 SSCSCFESFQARRMQLRWKNPETNDSEFLHTLNGSGLAVGRTLVAVIENYQNVDGSITIP 417 Query: 411 TVLRPYMNNLAVIK 424 VL+ YM L IK Sbjct: 418 KVLQTYMGGLTKIK 431 >gi|254462156|ref|ZP_05075572.1| seryl-tRNA synthetase [Rhodobacterales bacterium HTCC2083] gi|206678745|gb|EDZ43232.1| seryl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 430 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 204/429 (47%), Positives = 283/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR N E D AL +R P SE IL++D R I+ E+ +A +N S +G Sbjct: 1 MHDIRAIRDNAETFDAALARRGDAPLSEQILAIDSARRSKIQAAEEAQAEQNKASKLVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ + K + L +E + L +++ IPN+P +VP G + Sbjct: 61 AKASGDEAEFERLRALVTEKKAAVAQLNEEAKAEDARLTDMLARIPNLPAVDVPDGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G + ++EHFEI MDFD A K+SGARF +L G +A + RAL Q Sbjct: 121 DNKEVRLWGAPRTFNFDAKEHFEIAGVAASMDFDTAAKISGARFVMLKGPVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID H E+G TEV++P+LVRDEAMYGT ++PKF +D + TT+G WL+PTSEV LT Sbjct: 181 FMIDTHVDENGLTEVNSPVLVRDEAMYGTDKLPKFGEDSYQTTNGWWLVPTSEVPLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + ++++ +LP+R T FRSEAGSAGRDT GMLRQHQF K E+VS+T +DS E + Sbjct: 241 AGDVLDHSALPIRMTAHTLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSVTHPDDSDAEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML+CAE +L++L + YR + LCTGD+GF A +T+D+E WL GQN YREISS ST G+FQ Sbjct: 301 RMLACAEGLLEKLGVPYRTILLCTGDMGFGAHRTFDIEAWLPGQNAYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + +F HTLNGSG+AVGRCLIA+LEN DGS+ +P VL PY+ Sbjct: 361 ARRMNARFKPEDGGKPQFVHTLNGSGLAVGRCLIAVLENGQQTDGSIELPEVLAPYLGGK 420 Query: 421 AVIKKEHIL 429 + + + +L Sbjct: 421 STLTADGVL 429 >gi|325915438|ref|ZP_08177752.1| seryl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] gi|325538320|gb|EGD10002.1| seryl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] Length = 426 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 210/427 (49%), Positives = 279/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ+P L L+ R + + SL+ + + + + +++++ RNS S IG Sbjct: 1 MLDPALLRQHPADLAERLRSTRSFSLDTAELESLESERKRIQVRTQELQSMRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V AL E + ++L E + + L+ + +PN+P +VP+G Sbjct: 61 QAKAKG--EDVAALMAEVAGFGDELKASEDALDVIRAKLETIALGLPNLPAADVPLGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ G S ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 SENVEQSRWGTPRSFDFSVKDHVELGAPHGWLDGETAAKLSGARFTVLRGPIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 QFM+DLH EHGY E + PLLV E+M GTGQ+PKF DD+F T R+LIPTSEV L Sbjct: 179 QFMLDLHVGEHGYEETNVPLLVNAESMRGTGQLPKFEDDLFQTEVGESRRYLIPTSEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ EI++++ LPLR T + FR+EAGS GRDTRGM+RQHQF K ELV+ +DS Sbjct: 239 TNIVRDEIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACAPDDSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L+RL L YR V LCTGD+GF+A KTYDLEVWL QN YREISSCS C Sbjct: 299 AEHQRMTRCAEVVLERLGLPYRKVLLCTGDMGFAAIKTYDLEVWLPSQNTYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P S + H+LNGSG AVGR +IA++ENY NADGS+ +P VLRPY Sbjct: 359 GDFQARRMQARWRNPASGKPELLHSLNGSGTAVGRAMIAVMENYQNADGSIDVPQVLRPY 418 Query: 417 MNNLAVI 423 M L I Sbjct: 419 MGGLERI 425 >gi|56961795|ref|YP_173517.1| seryl-tRNA synthetase [Bacillus clausii KSM-K16] gi|67461675|sp|Q5WM19|SYS_BACSK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|56908029|dbj|BAD62556.1| seryl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 424 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 190/425 (44%), Positives = 276/425 (64%), Gaps = 4/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ +R + E + L++R+ + E LD R +I+++E+++++RN S QI Sbjct: 1 MLDVKKLRSDFEGVKAQLERRNGTIEGLERFSQLDASRRTMIQEVEELKSKRNDVSEQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + ++L E + E++ +++ + + L+ L+ IPN+P E+VP G S Sbjct: 61 ALKRDKK--DANSLIAEMKQVSERIKEQDEQLRSIETELEALLLTIPNIPQEDVPYGESE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N R G P R H+E+G AL ++DF+RA K++G+RF+V G A LERAL Sbjct: 119 EDNREERKWGDVPDFSFEPRPHWELGTALDILDFERAAKVTGSRFTVYKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D+H +EH YTEV P +V +M GTGQ+PKF +D+F ++ + IPT+EV +TN Sbjct: 179 NFMMDMHATEHDYTEVLPPYIVNRASMIGTGQLPKFEEDVFKISEEDYFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ E+++ + LP+ + + +FRSEAGSAGRDTRG++RQHQF K ELV + EDS + Sbjct: 239 LHRGEVLQGEQLPIAYNAYSTNFRSEAGSAGRDTRGLIRQHQFNKVELVRFSLPEDSNNQ 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M + AE +LKRL L YRVV+LCTGDL F++ KTYDLEVW+ N YREISSCS G+ Sbjct: 299 LEIMTTHAENVLKRLGLPYRVVTLCTGDLTFASTKTYDLEVWMPSANTYREISSCSNIGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N ++R ++ HTLNGSGVAVGR + AILENY DGS+ IP LRPYM Sbjct: 359 FQARRANIKFRRDPKSKPEYVHTLNGSGVAVGRTVAAILENYQQEDGSIVIPEALRPYMG 418 Query: 419 NLAVI 423 N+ ++ Sbjct: 419 NVNIL 423 >gi|313885298|ref|ZP_07819049.1| serine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] gi|312619404|gb|EFR30842.1| serine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] Length = 432 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 196/430 (45%), Positives = 267/430 (62%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD + +R + E + L R ++ + E +LD+K R LI K E+ + RN S +I Sbjct: 1 MLDRKVLRNDFEAVADRLANRGVKREILEQYQALDQKRRQLIVKAEEDKKLRNQVSQEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N DA E L ++ + E +V + L+ + +PN+P E+VP+G Sbjct: 61 QLKK--NKEDADAKIKEMQELGGRIKAQDGELAQVQADLEAIEFGLPNLPHEDVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G+ P ++ H++I E L ++DFDR K++GARF G A LERA+ Sbjct: 119 EDNVEIRRWGQIPEFDFEAKNHWDIAENLDILDFDRGAKVAGARFVYYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--RWLIPTSEVSLT 237 FM+D HT +GY E+ P +V D+AM+GTGQ PKF +D+F TD LIPT+EV LT Sbjct: 179 NFMLDTHT-NNGYKEMIVPYIVNDKAMFGTGQFPKFKEDVFQLTDERGLTLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y+ EI++ LP +F L+P+FRSEAGSAGRDTRG++R HQF K ELV + S+ Sbjct: 238 NFYADEILDLDQLPTKFVGLSPAFRSEAGSAGRDTRGLIRMHQFNKVELVKFAHPDHSYE 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E M AE IL+ L++ YR + LCTGD+GFSA KTYD+E W+ GQ+ YREISSCS Sbjct: 298 ELEGMTRDAESILQALEIPYRTIVLCTGDMGFSAAKTYDIEAWIPGQDTYREISSCSNTE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R R+R+ K + + HTLNGSG+AVGR L+AILENY DGSV IP L PYM Sbjct: 358 AFQAHRAMIRFRNEEGK-VDYVHTLNGSGLAVGRTLVAILENYQQVDGSVKIPEKLVPYM 416 Query: 418 NNLAVIKKEH 427 + I KE+ Sbjct: 417 GGVTKITKEN 426 >gi|288818895|ref|YP_003433243.1| seryl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|288788295|dbj|BAI70042.1| seryl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|308752482|gb|ADO45965.1| seryl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] Length = 424 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 198/429 (46%), Positives = 278/429 (64%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IR+ P+ + LK R P + +L LDE+ R +I+++E +R+ RN S +I Sbjct: 1 MLDIELIRKKPDWVKERLKTRGEEYPPLVDDVLILDEERRSIIRELEGLRSERNRISKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +G + AL+ + LKE++ LE + V K L+ IPN+P VP+G Sbjct: 61 GSMKKQG--ADTTALEVQMKKLKERIEELEHKLSIVERDHKNLMLRIPNLPHTSVPVGED 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ +R G + H+EIGE LG++DF+R KLSG+RF+VL G A LERAL Sbjct: 119 EKDNVEVRRWGIPKEFGFEPKPHWEIGEKLGILDFERGAKLSGSRFTVLKGMGAKLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLT 237 FM+D+H + GY E+ P LV+ + + GTGQ+PKF ++++ C D +LIPT+EV LT Sbjct: 179 INFMLDMHA-KKGYVEIMPPHLVKPQVLEGTGQLPKFEEELYRCERDELYLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+ EI+ LP+ T+ P +R EAG+ G+D RG++RQHQF K ELV I + EDS+ Sbjct: 238 NLFRDEILREDQLPIYLTSYTPCYRREAGAYGKDIRGIIRQHQFNKVELVKIVKPEDSYR 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E + S AE+IL+ L+L YRVV LCTGD+GFS+ KTYD+EVW Q+ YRE+SSCS C Sbjct: 298 ELEGLTSDAEDILRALELPYRVVLLCTGDMGFSSAKTYDIEVWFPSQSRYREVSSCSNCE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RRM +RY+D +++ + HTLNGS +A+GR L AILENY DGSV +P LR Y+ Sbjct: 358 EFQARRMGTRYKDQKGRNI-YVHTLNGSALAIGRTLAAILENYQREDGSVIVPHALRDYV 416 Query: 418 NNLAVIKKE 426 +IK E Sbjct: 417 K-ADIIKPE 424 >gi|148360873|ref|YP_001252080.1| seryl tRNA synthetase [Legionella pneumophila str. Corby] gi|296106062|ref|YP_003617762.1| seryl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] gi|166222738|sp|A5IH84|SYS_LEGPC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|148282646|gb|ABQ56734.1| seryl tRNA synthetase [Legionella pneumophila str. Corby] gi|295647963|gb|ADG23810.1| seryl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] Length = 426 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 190/428 (44%), Positives = 276/428 (64%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD Q +R+NP+++ L KR + + L+EK + L + ++ RN S IG+ Sbjct: 1 MLDNQLLRENPQYVATQLLKRGFQFDAVTFSQLEEKRKALQVSTQSLQNERNLRSKAIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G ++ ++ E + L +L + E EV ++ + +PN+P E VP+G Sbjct: 61 AKSRG--ENIEPMREEVNKLGAKLEQQKTELDEVLKQIEVISLSLPNIPHESVPVGKDEL 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G P+ + H E+GEALG MDF A K++G+RF V+ GHLA L RAL Q Sbjct: 119 DNQEIRKWGDVPAFSFPVKSHDELGEALGQMDFALAAKITGSRFVVMKGHLARLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+D+H +HGY E+ P +V +++ GTGQ+PKF D+F +G +L TSE+ +TN Sbjct: 179 FMLDIHIQQHGYQEIYVPYIVNADSLLGTGQLPKFEADLFKLTGDNGYYLTSTSEIPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I+ ++ LP+R+ +P FRSEAGS G+DT+GM+RQHQF K ELV IT+ EDS+ Sbjct: 239 TVREMILSAEQLPIRYVCHSPCFRSEAGSYGKDTKGMIRQHQFEKVELVWITKPEDSYNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+RL+L YRVV+LCTGD+G + KTYDLEVWL QN YREISSCS Sbjct: 299 LEQLTQHAEVILQRLNLPYRVVALCTGDIGAGSAKTYDLEVWLPSQNTYREISSCSNMEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R+P++ ++ HTLNGSG+AVGR L+AI+ENY + G++ IP L+PY+ Sbjct: 359 FQARRMKARFRNPDTNEIQLVHTLNGSGLAVGRTLVAIMENYQDEHGNIHIPDALKPYLG 418 Query: 419 NLAVIKKE 426 + +I + Sbjct: 419 GIDIISVK 426 >gi|54296544|ref|YP_122913.1| seryl-tRNA synthetase [Legionella pneumophila str. Paris] gi|67461683|sp|Q5X7N0|SYS_LEGPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|53750329|emb|CAH11723.1| hypothetical protein lpp0575 [Legionella pneumophila str. Paris] Length = 426 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 189/428 (44%), Positives = 276/428 (64%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD Q +R+NP+++ L KR + + L+EK + L + ++ RN S IG+ Sbjct: 1 MLDNQLLRENPQYVATQLLKRGFQFDAVTFSQLEEKRKALQVSTQSLQNERNLRSKAIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G ++ ++ E + L +L + E E+ ++ + +PN+P E VP+G Sbjct: 61 AKSRG--ENIEPMREEVNKLGAKLEQQKTELDEILKQIEVISLSLPNIPHESVPVGKDEL 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G P+ + H E+GEALG MDF A K++G+RF V+ GHLA L RAL Q Sbjct: 119 DNQEIRKWGDVPAFSFPVKSHDELGEALGQMDFALAAKITGSRFVVMKGHLARLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+D+H +HGY E+ P +V +++ GTGQ+PKF D+F +G +L TSE+ +TN Sbjct: 179 FMLDIHIQQHGYQEIYVPYIVNADSLLGTGQLPKFEADLFKLTGDNGYYLTSTSEIPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I+ ++ LP+R+ +P FRSEAGS G+DT+GM+RQHQF K ELV IT+ EDS+ Sbjct: 239 TVREMILSAEQLPIRYVCHSPCFRSEAGSYGKDTKGMIRQHQFEKVELVWITKPEDSYNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+RL+L YRVV+LCTGD+G + KTYDLEVWL QN YREISSCS Sbjct: 299 LEQLTQHAEVILQRLNLPYRVVALCTGDIGAGSAKTYDLEVWLPSQNTYREISSCSNMEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R+P++ ++ HTLNGSG+AVGR L+AI+ENY + G++ IP L+PY+ Sbjct: 359 FQARRMKARFRNPDTNEIQLVHTLNGSGLAVGRTLVAIMENYQDEHGNIHIPDALKPYLG 418 Query: 419 NLAVIKKE 426 + +I + Sbjct: 419 GIDIISVK 426 >gi|330993311|ref|ZP_08317246.1| Seryl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] gi|329759341|gb|EGG75850.1| Seryl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] Length = 423 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 213/424 (50%), Positives = 283/424 (66%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ +R +P+ D LK+R ++ +L LD R +++++ARRN S +IG Sbjct: 1 MHDLRALRADPDGFDADLKRRGEPAVAQAVLLLDHDRRAAETALQELQARRNQISREIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + AL+ E + K + L+ ++ ++ + +PN E VP G + Sbjct: 61 MRRSG--ADTSALEAEVTGAKAHMEALQARVDDLDGQIRGTLERLPNRLDESVPAGADES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ + G P +REHFE+GEALGLMDF+ A++LSGARF VL G LA +ERALGQ Sbjct: 119 GNVQVHQHGTPPEFAFAAREHFELGEALGLMDFETASRLSGARFVVLRGQLARMERALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT E+GY E + P+LV +EAMYGT ++PKFAD F T DGRWLIPT+EV LT Sbjct: 179 FMLDLHTGENGYEETAVPVLVNNEAMYGTDKLPKFADQSFRTEDGRWLIPTAEVPLTASV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I+ LP R L+ FRSEAG+AGRDTRGMLRQHQF K E+VSIT E+S EHE Sbjct: 239 AGQILPVGVLPQRLVALSSCFRSEAGAAGRDTRGMLRQHQFQKVEMVSITTPEESDAEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +L++L + YR + LC GD GF A +T+DLE WL GQ +REISSCST +FQ Sbjct: 299 RMTRCAEMVLEKLGIPYRRMLLCAGDTGFGAARTFDLEAWLPGQKAWREISSCSTTRDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR+N+RYR + K F HTLNGSG+AVGR LIA++ENY ADGS+T+P VLRPYM + Sbjct: 359 ARRLNARYRAADGK-PAFVHTLNGSGLAVGRTLIAVMENYQTADGSITVPDVLRPYMGGI 417 Query: 421 AVIK 424 VI+ Sbjct: 418 EVIR 421 >gi|81429415|ref|YP_396416.1| seryl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] gi|123563655|sp|Q38UM4|SYS_LACSS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|78611058|emb|CAI56111.1| Seryl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 424 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 191/427 (44%), Positives = 260/427 (60%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++ + + +++LDEK R LI + E+++ RN+ S I Sbjct: 1 MLDIRVIRENVQWAKDKLATRGIDAAEIDEVVALDEKRRALIVRTEELKKNRNAASEAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A N + ++ L+ + EV + ++ +PN P + P+G Sbjct: 61 VAKR--NKEDATEQIAAMKNVGAEIKELDAQLAEVKEKVDYILVRLPNFPDDSAPVGLDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + R H++IGE LG++DF+RA K+SG+RF G A LERA+ Sbjct: 119 SFSREERKWSTPREFDFEPLAHWDIGEKLGILDFERAAKVSGSRFVYYKGAGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD---MFCTTDGRWLIPTSEVSL 236 FM+D H E GY E+ P LV E+M+GTGQ PKF +D M + LIPT+EV L Sbjct: 179 NFMLDQHAKE-GYEEMITPYLVNGESMFGTGQFPKFTEDVYTMTNEGEPMTLIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN Y EI++ LP+ FT L+P+FRSEAGSAGRDTRG++R HQF K E+V T+ E+SF Sbjct: 238 TNFYRDEILDGAQLPIYFTALSPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFTKPEESF 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E+M + AE ILK L+L Y V++L TGD F++ KTYD+EVWL QN YREISSCS C Sbjct: 298 NELEKMTADAENILKALNLPYHVITLATGDASFTSAKTYDIEVWLPAQNTYREISSCSDC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD + + HTLNGSG+AVGR + AILENY N DG+VTIP L PY Sbjct: 358 TDFQARRAQIRYRDEDG-HVNLVHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEPLVPY 416 Query: 417 MNNLAVI 423 M + I Sbjct: 417 MGGMTKI 423 >gi|54293502|ref|YP_125917.1| seryl-tRNA synthetase [Legionella pneumophila str. Lens] gi|67461679|sp|Q5WZ31|SYS_LEGPL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|53753334|emb|CAH14781.1| hypothetical protein lpl0551 [Legionella pneumophila str. Lens] Length = 426 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 189/428 (44%), Positives = 275/428 (64%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD Q +R+NP+++ L KR + + L+EK + L + ++ RN S IG+ Sbjct: 1 MLDNQLLRENPQYVATQLLKRGFQFDAVTFSQLEEKRKALQVSTQSLQNERNLRSKAIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G ++ ++ E + L +L + E E+ ++ + +PN+P E VP+G Sbjct: 61 AKSRG--ENIEPMREEVNKLGAKLEQQKTELDEILKQIEVISLSLPNIPHESVPVGKDEL 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G P+ + H E+GEALG MDF A K++G+RF V+ GHLA L RAL Q Sbjct: 119 DNQEIRKWGDVPAFSFPVKSHDELGEALGQMDFALAAKITGSRFVVMKGHLARLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+D+H +HGY E+ P +V +++ GTGQ+PKF D+F +G +L TSE+ +TN Sbjct: 179 FMLDIHIQQHGYQEIYVPYIVNADSLLGTGQLPKFEADLFKLTGDNGYYLTSTSEIPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I+ ++ LP+R+ +P FRSEAGS G+DT+GM+RQHQF K ELV IT+ EDS+ Sbjct: 239 TVREMILSAEQLPIRYVCHSPCFRSEAGSYGKDTKGMIRQHQFEKVELVWITKPEDSYNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+RL L YRVV+LCTGD+G + KTYDLEVWL QN YREISSCS Sbjct: 299 LEQLTQHAEVILQRLKLPYRVVALCTGDIGAGSAKTYDLEVWLPSQNTYREISSCSNMEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R+P++ ++ HTLNGSG+AVGR L+AI+ENY + G++ IP L+PY+ Sbjct: 359 FQARRMKARFRNPDTNEIQLVHTLNGSGLAVGRTLVAIMENYQDEHGNIHIPDALKPYLG 418 Query: 419 NLAVIKKE 426 + +I + Sbjct: 419 GIDIISVK 426 >gi|163855897|ref|YP_001630195.1| seryl-tRNA synthetase [Bordetella petrii DSM 12804] gi|229559873|sp|A9IGG4|SYS_BORPD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|163259625|emb|CAP41926.1| serS [Bordetella petrii] Length = 448 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 201/452 (44%), Positives = 275/452 (60%), Gaps = 31/452 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R++ + + LK R ++ ++ L+ + + + + E ++ARRN+ + QIGQ Sbjct: 1 MLDPILLRKDLQTVVSRLKTRGVDFDTQRFNELEARRKAVQTETESLQARRNALAKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G A+ E+ + +L LE + V SL L+ +PN+P E VP G SA+ Sbjct: 61 LKAQGQ--DASAVLAESQAIPARLKQLEDDLAVVQQSLGDLLMAVPNLPHESVPAGASAD 118 Query: 121 ENILIRSV--------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 +N+ +R G P ++H +GE LG +DFD A KLSGARFS + G +A Sbjct: 119 DNVEVRRWLPGPPAADGNPPPLPFEPKDHVALGEPLG-LDFDTAAKLSGARFSFMRGPVA 177 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------- 222 L RAL QFM+DL T +HGYTE P +V +YGTGQ+PKF DDMF Sbjct: 178 RLHRALAQFMLDLQTGQHGYTECYTPYIVNSSTLYGTGQLPKFKDDMFFVTKGGEDDDPK 237 Query: 223 ---------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + ++LI TSE++LT++ II + +LPLR T P FRSEAGS GRDTR Sbjct: 238 VDERGNALAREDQYLISTSEITLTSVARDSIIPAANLPLRLTAHTPCFRSEAGSGGRDTR 297 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 GM+RQHQF K E+V I E S+ E M+ AE +L+ L+L YRVV LCTGD+GF + K Sbjct: 298 GMIRQHQFDKVEMVQIVHPETSYQVLEDMVGHAEHVLQLLELPYRVVLLCTGDMGFGSAK 357 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 TYDLEVWL QN +REISS S C FQ+RRM +R+R K + HTLNGSG+AVGR L Sbjct: 358 TYDLEVWLPAQNTWREISSVSNCETFQARRMQARFRAAQGK-PDYVHTLNGSGLAVGRAL 416 Query: 394 IAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +A+LEN+ ADGS+ +P VL+PYM L V++ Sbjct: 417 VAVLENHQQADGSIAVPKVLQPYMGGLTVLQP 448 >gi|307609316|emb|CBW98796.1| hypothetical protein LPW_05921 [Legionella pneumophila 130b] Length = 426 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 189/428 (44%), Positives = 275/428 (64%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD Q +R+NP+++ L KR + + L+EK + L + ++ RN S IG+ Sbjct: 1 MLDNQLLRENPQYVATQLLKRGFQFDAVTFSQLEEKRKALQVSTQSLQNERNLRSKAIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G ++ ++ E + L +L + + EV ++ + +PN+P E VP+G Sbjct: 61 AKSRG--ENIEPMREEVNKLGAKLEQQKTDLEEVLKQIEAITLSLPNIPHESVPVGKDEL 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G P+ + H E+GEALG MDF A K++G+RF V+ GHLA L RAL Q Sbjct: 119 DNQEIRKWGDVPAFSFPVKSHDELGEALGQMDFALAAKITGSRFVVMKGHLARLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+D+H +HGY E+ P +V +++ GTGQ+PKF D+F +G +L TSE+ +TN Sbjct: 179 FMLDIHIQQHGYQEIYVPYIVNADSLLGTGQLPKFEADLFKLTGDNGYYLTSTSEIPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I+ ++ LP+R+ +P FRSEAGS G+DT+GM+RQHQF K ELV IT+ EDS+ Sbjct: 239 TVREMILSAEQLPIRYVCHSPCFRSEAGSYGKDTKGMIRQHQFEKVELVWITKPEDSYNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+RL+L YRVV+LCTGD+G + KTYDLEVWL QN YREISSCS Sbjct: 299 LEQLTQHAEVILQRLNLPYRVVALCTGDIGAGSAKTYDLEVWLPSQNTYREISSCSNMEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R+P + ++ HTLNGSG+AVGR L+AI+ENY + G++ IP L+PY+ Sbjct: 359 FQARRMKARFRNPETNEIQLVHTLNGSGLAVGRTLVAIMENYQDEHGNIHIPDALKPYLG 418 Query: 419 NLAVIKKE 426 + +I + Sbjct: 419 GIDIISVK 426 >gi|171911399|ref|ZP_02926869.1| seryl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136] Length = 423 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 179/426 (42%), Positives = 268/426 (62%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ R+ P+++ L R L + + SLDE+ R + + ++ RN S +I Sbjct: 1 MLDIRLFREKPDYVKERLSTRGAGLSSMVDEVTSLDEQRREAETERQKLQGDRNRISKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G A +G A++ + + +++ + ++ + + L+ IPN+P + PIG S Sbjct: 61 GIAKKKG--EDTSAIEAQVRGIGDRIEQIGRDADALDVKQRDLMLGIPNLPHDACPIGES 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N ++ G+KP+ ++H +G G++DF+ K++G+ F V G A LERAL Sbjct: 119 AEQNPEVKVWGEKPTYDFAPKDHVALGAQHGMLDFEAGAKITGSAFVVYRGAGARLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 F++DLHT+ HGYTEV+ P +V+ +A+ GT Q+PKFAD ++ D +L+PT+EV +T Sbjct: 179 INFLLDLHTTSHGYTEVNTPFVVKADALVGTTQLPKFADQVYHCQEDDLYLVPTAEVPVT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+ EI++++SLP+++ P FR EAGSAG TRG++R HQF K ELV IT E S Sbjct: 239 NLHREEIVKAESLPIQYAAYTPCFRREAGSAGLGTRGLIRMHQFDKVELVKITTPETSMD 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E++ + AE +L+ L LHYR++ LCTGD+GF + KTYD+EVW GQ Y E+SSCS G Sbjct: 299 ELEKLTANAEAVLQTLGLHYRIIELCTGDVGFGSTKTYDIEVWAPGQGTYLEVSSCSNFG 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RRMN RY+D N K+ +F HTLNGSG A+ R +A++E Y ADGS+TIP L+ Y Sbjct: 359 EFQARRMNLRYKDENGKN-RFCHTLNGSGTALARLFVALVETYQQADGSITIPAPLQRYF 417 Query: 418 NNLAVI 423 I Sbjct: 418 -GTEKI 422 >gi|146340973|ref|YP_001206021.1| seryl-tRNA synthetase [Bradyrhizobium sp. ORS278] gi|166200605|sp|A4YV70|SYS_BRASO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|146193779|emb|CAL77796.1| Seryl-tRNA synthetase (Serine--tRNA ligase) [Bradyrhizobium sp. ORS278] Length = 442 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 233/443 (52%), Positives = 300/443 (67%), Gaps = 19/443 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP+ D AL +R L P S +L++DE+ R I E +ARRN+ S +IG+ Sbjct: 1 MHDIKSIRDNPQDFDAALTRRGLSPLSSQLLAIDERRRAAILASEQAQARRNAASREIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + AL E + LK +P LE + L + +S IPN+PL+EVP G + Sbjct: 61 AKKAKDEGRASALMEEVAKLKTTMPELEAAAKQADEELARELSAIPNLPLDEVPDGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ G + + + H +IG ALG MDF+ A KLSGARF VL LA LERA+GQ Sbjct: 121 DNVERHVFGARRNYAFAPKAHDDIGTALG-MDFESAAKLSGARFVVLKKGLARLERAIGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--------------TTDGR 226 FM+DLHT+EHGYTEV+ PLLVR++ M+GTGQ+PKF DD F + Sbjct: 180 FMLDLHTTEHGYTEVNPPLLVRNDVMFGTGQLPKFEDDQFWAVRGELLIAPDERLKAERL 239 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 LIPT+EV+LTNL I++ K LP+R T L P FR+EAG+AGRDTRGM+RQHQF K EL Sbjct: 240 GLIPTAEVALTNLVRESIVDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVEL 299 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ-- 344 VSIT E S EHERML+CAEE+L+RLDLHYRV++LCTGD+GFS+ KTYD+EVW+ GQ Sbjct: 300 VSITTPETSKDEHERMLACAEEVLRRLDLHYRVITLCTGDMGFSSQKTYDIEVWMPGQGD 359 Query: 345 -NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 +REISSCS CG+FQ+RRM++RYR + K +F HTLNGSG AVGR LIA++E Y A Sbjct: 360 GGAFREISSCSVCGDFQARRMDARYRASDGK-PRFVHTLNGSGTAVGRALIAVMETYQQA 418 Query: 404 DGSVTIPTVLRPYMNNLAVIKKE 426 DGS+ +P VL+PYM L V+ + Sbjct: 419 DGSIAVPDVLQPYMGGLKVVAAD 441 >gi|227512854|ref|ZP_03942903.1| seryl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] gi|227083854|gb|EEI19166.1| seryl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] Length = 427 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 191/430 (44%), Positives = 271/430 (63%), Gaps = 8/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR++P++ L R ++ + + +L D K R LI K E ++A RN S +I Sbjct: 1 MLDIKKIRKDPDYTKEKLATRGIKAETIDELLGFDAKRRDLIVKSESLKATRNDVSDKIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N E + + L+++ H++ L + +PN+P ++VP+ + Sbjct: 61 QLKR--NKEDASEAIAEMKKTGQTIKDLDEQLHQIEIDENDLAAHLPNIPADDVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + ++ +R VG+ PS + H++IGE LG++DF+RA K+SG+RF G A LERA+ Sbjct: 119 DGSVELRRVGETPSFGFKPKHHWDIGENLGILDFERAAKVSGSRFVYYMGDGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD---MFCTTDGRWLIPTSEVSL 236 F +D +T E GY EV P +V +MYGTGQ PKF + T +IPT+EV L Sbjct: 179 NFYLDQNT-EAGYQEVIPPYMVNGASMYGTGQFPKFLESKAGYEITGTDLTMIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y +EII + LP+ FT L+P+FRSEAGSAGRDT+G++R HQF K E+V T+ EDS+ Sbjct: 238 VNYYRNEIIPEEKLPVSFTALSPAFRSEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E++ AE+ LK+L L Y V++L T D+ F+A T+DLEVW Q+ YREISSCS Sbjct: 298 DALEQITHQAEDNLKKLGLAYHVITLTTSDMSFTAAMTHDLEVWFPAQDKYREISSCSNT 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + +YRD + K L + HTLNGSG+AVGR + AILENY N DGSVTIP VLRPY Sbjct: 358 TDFQARRAHIQYRDEDGK-LHYVHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPY 416 Query: 417 MNNLAVIKKE 426 M+ I+K+ Sbjct: 417 MHGKTKIEKQ 426 >gi|71066173|ref|YP_264900.1| seryl-tRNA synthetase [Psychrobacter arcticus 273-4] gi|123648178|sp|Q4FR92|SYS_PSYA2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|71039158|gb|AAZ19466.1| seryl-tRNA synthetase [Psychrobacter arcticus 273-4] Length = 427 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 189/430 (43%), Positives = 267/430 (62%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R + L L R + S++ + + L + E++++RRN+ + Q+G Sbjct: 1 MIDPKLLRGDLTDLQQQLATRGYTLDMAFWQSIENERKSLQVQTEELQSRRNAGAKQVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L + ++ ++ E E + + + IPN+P +VP+G S + Sbjct: 61 LKKSG--EDTSELLADMQSVSGEIKTAEDELRTLQERINQAALQIPNIPAADVPVGASED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G ++H IGE LG++DF+ A KL+G+RF+VL G LA + RAL Q Sbjct: 119 DNVEVRKWGTPREFDFEIKDHAHIGETLGMLDFEAAAKLTGSRFNVLKGQLAQMHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-------RWLIPTSE 233 FM++ HT ++GYTE P +V E++ GTGQ+PKF D+F + +LIPT+E Sbjct: 179 FMLNTHTIKYGYTETYVPYIVNSESLKGTGQLPKFEGDLFKLINHTNNDDMDFYLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V +TNL E ++ K LPL+FT P FRSEAGS GRDTRG++RQHQF K E+V+I E Sbjct: 239 VPMTNLVRGERLDIKELPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFEKVEMVNIATAE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E M AE IL++L+L YR V LCTGD+GF+A KTYD+EVWL Q+ YREISSC Sbjct: 299 QSDELLEAMTGQAEFILQQLNLPYRTVKLCTGDMGFAAQKTYDIEVWLPSQDTYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S CG+FQ+RRM +R +D K HTLNGSG+AVGR L+A++ENY NADGS+TIP VL Sbjct: 359 SNCGDFQARRMGTRVKD--GKQTSLVHTLNGSGLAVGRTLLAVMENYQNADGSITIPEVL 416 Query: 414 RPYMNNLAVI 423 RP+M I Sbjct: 417 RPFMGGADSI 426 >gi|82701314|ref|YP_410880.1| seryl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] gi|123545225|sp|Q2YCN3|SYS_NITMU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|82409379|gb|ABB73488.1| seryl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] Length = 456 Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 201/458 (43%), Positives = 271/458 (59%), Gaps = 34/458 (7%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI +R +H+ L +R+ +L+ + + L ++++ARRN S QIG Sbjct: 1 MLDIHLLRTQLDHVARLLAERNYVFPLAEFSALEAERKNLQTSTQELQARRNGASKQIGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G A+ E + L ++L E +V ++L+ ++ IPN+P VP G S + Sbjct: 61 AKSRG--EDASAILAEVAHLGDELKQAESRLDQVQAALQHILLQIPNLPHSSVPEGRSES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G P+ +H IGE LGL+DF A K+SGARFS+LTG LAHL RAL Q Sbjct: 119 DNREVRRWGTPPTFDFSPADHVSIGERLGLLDFPTAAKISGARFSLLTGSLAHLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------------- 225 FM+D+H EHGYTE P LV E++ GTGQ+PKF +D+F Sbjct: 179 FMLDVHVREHGYTETYVPYLVNAESLRGTGQLPKFKEDLFEVPRRKTAEPFLENQPVAAT 238 Query: 226 ----------------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +LIPTSEV L+N+ I++ + LP++ T P FRSEAGS G Sbjct: 239 LPSNSNSPQGGQDDDDLYLIPTSEVPLSNIVRDRIVDPELLPIKLTAHTPCFRSEAGSYG 298 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 RDTRGM+RQHQF K ELV I S+ E + AE IL++L L YRV++LCT D+GF Sbjct: 299 RDTRGMIRQHQFEKVELVQIVHPAHSYKALEELTGHAEAILQKLKLPYRVMALCTADMGF 358 Query: 330 SACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAV 389 +A KTYD+EVWL Q YREISSCS C FQ+RRM +R+R+ K + HTLNGSG+AV Sbjct: 359 AAAKTYDIEVWLPQQGTYREISSCSNCEAFQARRMQARFRNEKGK-PELLHTLNGSGLAV 417 Query: 390 GRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEH 427 GR L+AILEN+ NADGSV+IP VL+ YM + + Sbjct: 418 GRTLVAILENFQNADGSVSIPKVLQGYMGGTERLVPHN 455 >gi|227522981|ref|ZP_03953030.1| seryl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] gi|227089799|gb|EEI25111.1| seryl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] Length = 427 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 190/430 (44%), Positives = 270/430 (62%), Gaps = 8/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR++P++ L R ++ + + +L D K R LI K E ++A RN S +I Sbjct: 1 MLDIKKIRKDPDYTKEKLATRGIKAETIDELLGFDAKRRDLIVKSESLKATRNDVSDKIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N E + + L+++ H++ L + +PN+P ++VP+ + Sbjct: 61 QLKR--NKEDASEAIAEMKKTGQTIKDLDEQLHQIEIDENDLAAHLPNIPADDVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + ++ +R VG+ PS + H++IGE LG++DF+RA K+SG+RF G A LERA+ Sbjct: 119 DGSVELRRVGETPSFGFKPKHHWDIGENLGILDFERAAKVSGSRFVYYMGDGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD---MFCTTDGRWLIPTSEVSL 236 F +D +T E Y EV P +V +MYGTGQ PKF + T +IPT+EV L Sbjct: 179 NFYLDQNT-EASYQEVIPPYMVNGASMYGTGQFPKFLESKAGYEITGTDLTMIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y +EII + LP+ FT L+P+FRSEAGSAGRDT+G++R HQF K E+V T+ EDS+ Sbjct: 238 VNYYRNEIIPEEKLPVSFTALSPAFRSEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E++ AE+ LK+L L Y V++L T D+ F+A T+DLEVW Q+ YREISSCS Sbjct: 298 DALEQITHQAEDNLKKLGLAYHVITLTTSDMSFTAAMTHDLEVWFPAQDKYREISSCSNT 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + +YRD + K L + HTLNGSG+AVGR + AILENY N DGSVTIP VLRPY Sbjct: 358 TDFQARRAHIQYRDEDGK-LHYVHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPY 416 Query: 417 MNNLAVIKKE 426 M+ I+K+ Sbjct: 417 MHGKTKIEKQ 426 >gi|114330290|ref|YP_746512.1| seryl-tRNA synthetase [Nitrosomonas eutropha C91] gi|122314663|sp|Q0AJC4|SYS_NITEC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|114307304|gb|ABI58547.1| seryl-tRNA synthetase [Nitrosomonas eutropha C91] Length = 437 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 198/438 (45%), Positives = 270/438 (61%), Gaps = 18/438 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + +++ L +R +L+ + + + + ++A+RNS S QIG Sbjct: 1 MLDIQQLRSDLQNITTCLAQRGYNFPVSDFENLESQRKSIQTLTQTLQAKRNSASKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +G V + E + + + L E + + + L++L+ IPN+P VP G +A+ Sbjct: 61 AKQQG--EDVSTIMAEIANMGDALKQAENQFESIQTKLQQLLMEIPNLPHNSVPTGKNAD 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G + ++H IGE LGL+DF+ A KLSGARF +L G +A L RAL Q Sbjct: 119 GNLEIRRWGTPKNFDFTVKDHVSIGEHLGLIDFETAAKLSGARFCLLKGGVARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------------TDG 225 FM+D HT E+GY EV P LV + + GTGQ+PKF D+F G Sbjct: 179 FMLDAHTQENGYNEVYVPYLVNADCLRGTGQLPKFEQDLFSVLTNAQDETDNVDKTGMVG 238 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 LIPT+EV L N+ + I+ + LPL+F P FRSEAGS G+DTRG++RQHQF K E Sbjct: 239 LHLIPTAEVPLANIVRNTIVPLEQLPLKFVAHTPCFRSEAGSYGKDTRGLIRQHQFDKVE 298 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 LV IT E S+ E ++ AE+IL++L+L YR++ LCTGD+GFSA KTYD+EVWL Q Sbjct: 299 LVQITHPEKSYEALESLVGHAEKILQKLELPYRIMLLCTGDMGFSAAKTYDIEVWLPAQQ 358 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISSCS C FQ+RRM +R+R K + HTLNGSG+AVGR L+AILENY N DG Sbjct: 359 TYREISSCSNCEAFQARRMQARFRKGQDK-PELLHTLNGSGLAVGRTLVAILENYQNEDG 417 Query: 406 SVTIPTVLRPYMNNLAVI 423 SVTIP +L+ YM + I Sbjct: 418 SVTIPEILQTYMGGIKRI 435 >gi|77917941|ref|YP_355756.1| seryl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|123575016|sp|Q3A7Q8|SYS_PELCD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|77544024|gb|ABA87586.1| seryl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] Length = 423 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 190/424 (44%), Positives = 263/424 (62%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++R + + L R LD + R L+ + E ++A +N SA IG+ Sbjct: 1 MLDLKFVRDHFAEAEQRLATRGGAVDLSAFTDLDARRRTLLGESESLKAEKNQVSALIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S V + ++ L++E +V L+ L+ +PN+P E+ P+GTS + Sbjct: 61 TK---DKSQVQGEIARMKDVSVRIKELDEELKQVEGDLRTLLMTLPNLPHEDCPVGTSED 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G+ P ++ H++IGE L ++DF+RA KL+GARF++ G A LERAL Sbjct: 118 DNKEVRRWGQVPEFDFEAQSHWDIGERLDILDFERAGKLAGARFAIYKGAGARLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHT EH Y E+ PL+V + M GTGQ+PKF D+F +LIPT+EV +TN+ Sbjct: 178 FMLDLHTGEHKYVEILPPLMVNRDTMTGTGQLPKFESDLFHLDDPDFFLIPTAEVPVTNI 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ LP+ + P FR EAGS GRDTRG++R HQF K ELV R E+S E Sbjct: 238 HRDEILADGDLPVCYAAYTPCFRKEAGSHGRDTRGLIRMHQFNKVELVKFARPEESDQEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ++L AEE+L+RL L YRVV LCTGD+GFSA +T+D+EVWL GQ +REISSCS +F Sbjct: 298 LKLLDNAEEVLRRLKLPYRVVDLCTGDIGFSAARTFDIEVWLPGQQTFREISSCSNFRDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R+R + HTLNGSG+AVGR L+AILENY DGSV IP LRPYM Sbjct: 358 QARRAAIRFRREEKGKPELVHTLNGSGLAVGRTLVAILENYQQEDGSVVIPEALRPYMGG 417 Query: 420 LAVI 423 + I Sbjct: 418 VEKI 421 >gi|239905015|ref|YP_002951754.1| seryl-tRNA synthetase [Desulfovibrio magneticus RS-1] gi|259511666|sp|C4XHA0|SYS_DESMR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|239794879|dbj|BAH73868.1| seryl-tRNA synthetase [Desulfovibrio magneticus RS-1] Length = 429 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 184/428 (42%), Positives = 264/428 (61%), Gaps = 3/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++RQNPE + L +R + L+L+E+ R I E +++RN+ SA++ + Sbjct: 1 MLDLKFLRQNPEAVAAGLARRRFPFDLDAFLALEERRRACITAAEQKKSQRNAASAEVAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + + +++ L+++ + + + L+ +PN+P P G S Sbjct: 61 AKRAGGDASAALAGLGALS--DEIKALDEDAKAIDAEVAALLLGVPNLPHATTPDGASEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +R G+ + + A +D +RA KLSGARF+VL G LA LERAL Sbjct: 119 DNPEVRRWGQPREFTEFAPREHQDVGAALGLDAERAVKLSGARFAVLRGALARLERALAA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHT HGY EV P +V DE + GTGQ+PKFA+D+F +LIPT+EV +TNL Sbjct: 179 FMLDLHTGSHGYVEVVTPYIVTDECLVGTGQLPKFAEDLFKLEGRAAYLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E++ +LPL +T FRSEAGS G+DT+G++R HQF K ELV + S+ E Sbjct: 239 HRGEVLPESALPLGYTCHTQCFRSEAGSYGKDTKGLIRLHQFGKVELVRFVHPDTSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AE +L+ L+L YRVV+LC GD+GFS+ KTYDLEVWL Q YREISSCS +F Sbjct: 299 EKLTNQAEAVLQALELPYRVVALCAGDIGFSSAKTYDLEVWLPAQGKYREISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R++ K + HTLNGSG+AVGR + AILEN + ADGSV +P L PYM Sbjct: 359 QARRADIRFKPDGGKKTAYVHTLNGSGLAVGRTMAAILENGVQADGSVVLPRALVPYMGG 418 Query: 420 LAVIKKEH 427 L V++ E Sbjct: 419 LEVLEPEG 426 >gi|329910977|ref|ZP_08275424.1| Seryl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327546036|gb|EGF31113.1| Seryl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 431 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 195/433 (45%), Positives = 264/433 (60%), Gaps = 12/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DIQ +R++ + + L R L+ + + + + ED++ +RN+ S QIG Sbjct: 1 MIDIQLLRKDIDSVAARLATRKFVLDVAGFNLLEGERKQIQIRAEDLQGKRNALSKQIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G S A+ E + + ++L V L + + IPN+P E P+G Sbjct: 61 LKGKGEDS--SAVMAEVAGIADELKSSADRLEAVQLQLSEFMLQIPNLPHESTPVGKEEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG + +H +IG LG +DFD A KL+G+RFSV+ G +A L RAL Q Sbjct: 119 DNVEVRRVGVPRNVDFTVLDHVDIGAPLG-LDFDVAVKLTGSRFSVMKGGIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------DGRWLIPTS 232 FM+D HT EHGYTE P +V +++ GTGQ+PKF ++F + +LIPTS Sbjct: 178 FMLDTHTGEHGYTECYTPYIVNADSLRGTGQLPKFEAELFAVKKGGQEGEGETLYLIPTS 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EVSLTN+ +II LP++ T P FRSEAGS GRDTRGM+RQHQF K E+V + Sbjct: 238 EVSLTNIVRDQIIAIDDLPVKMTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E SF E M+ AE IL++L L YRVVSLCTGD+GFSA KTYD+EVWL Q YREISS Sbjct: 298 EQSFAVLEEMVGHAEVILQKLGLPYRVVSLCTGDIGFSATKTYDIEVWLPAQKTYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C +FQ+RRM +R+R+ K + HTLNGSG+AVGR L+A+LEN+ ADGSV IP V Sbjct: 358 LSNCDSFQARRMQTRFRNAQGK-PELLHTLNGSGLAVGRTLVAVLENFQQADGSVDIPEV 416 Query: 413 LRPYMNNLAVIKK 425 L YM L + Sbjct: 417 LWNYMGGLKRLVP 429 >gi|295693517|ref|YP_003602127.1| seryl-tRNA synthetase [Lactobacillus crispatus ST1] gi|295031623|emb|CBL51102.1| Seryl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 435 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 191/438 (43%), Positives = 266/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++ +D K R + K E ++A+RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDAKRRKDLTKSEQLKAKRNDVSKQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + +++ L+KE E+ ++ +PN P + PIG Sbjct: 61 EKKR--NKEDASDAIAAMREVGKEIKDLDKEVAELTEKQNYILLRLPNFPADSDPIGPDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + H++IG LG++D+DRA+K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWHPTTEFNFKPKAHWDIGTDLGILDWDRASKVSGARFVYYIGAGALLERAVF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T E GYTE+ P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKE-GYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 238 AEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGRC+ AILENY N DGSVT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRCVAAILENYQNEDGSVTVPD 416 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 417 VLVPYMNGMKKITKESGL 434 >gi|126739018|ref|ZP_01754712.1| seryl-tRNA synthetase [Roseobacter sp. SK209-2-6] gi|126719635|gb|EBA16343.1| seryl-tRNA synthetase [Roseobacter sp. SK209-2-6] Length = 430 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 207/429 (48%), Positives = 283/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R S IL+LDE+ R I++ E +A +N + +IG Sbjct: 1 MHDIRAIRENPAAFDAALARRGDAGVSSEILALDEERRAKIQEAEAAQAAQNKAAKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + L+ E + K ++ L+ E+ + +++ I N+P +VP G + Sbjct: 61 AKAKGDNETFERLRAEVAEKKSEVAALQNAAKELDAKQTDILARIANLPAADVPEGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G ++EHFEI MDF+ A K SGARF L G +A + RAL Q Sbjct: 121 DNVEVNRWGTPAELDFDAKEHFEITGVAANMDFETAAKTSGARFVFLKGGVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G TEV P+LVRDEAMYGT ++PKF DD + TT+G WL+PTSEV+LT Sbjct: 181 FMVDTHVDENGLTEVQTPVLVRDEAMYGTDKLPKFGDDSYQTTNGWWLVPTSEVTLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + ++++++ LP+R T FRSEAGSAG+DT GMLRQHQF K E+VSITR ++S E + Sbjct: 241 AGDVLDARDLPIRMTAHTQCFRSEAGSAGKDTSGMLRQHQFEKVEMVSITRPDESDNEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE +L++LD+ YR V LCTGD+GF A +TYD+E WL GQ+ YREISS ST G+FQ Sbjct: 301 RMLRCAEGLLEKLDVPYRTVVLCTGDMGFGARRTYDIEAWLPGQDTYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R +F HTLNGSG+AVGRCLIA+LEN ADGSV +P VL PY+ Sbjct: 361 ARRMNARFRPEEGAKPEFVHTLNGSGLAVGRCLIAVLENGQQADGSVKLPEVLSPYLGGK 420 Query: 421 AVIKKEHIL 429 + E +L Sbjct: 421 LTLTAEGVL 429 >gi|219848336|ref|YP_002462769.1| seryl-tRNA synthetase [Chloroflexus aggregans DSM 9485] gi|254783016|sp|B8G8S1|SYS_CHLAD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|219542595|gb|ACL24333.1| seryl-tRNA synthetase [Chloroflexus aggregans DSM 9485] Length = 426 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 168/425 (39%), Positives = 255/425 (60%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+ P+ + L + ++ + +L+ DE+ R LI ++E +A RN+ S QIG Sbjct: 1 MLDIKLIREQPDEVKRQLARCGVDGAIIDQVLAFDEQRRRLIYEVETRKAERNAVSKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + A L +++ L+++ V + + I N+P +VP G Sbjct: 61 AMK---DQAERQAKIEAMRRLGDEIAELDRQLAAVEEQQRAAMLEIRNLPHPDVPDGVDE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+++ G++ +R H+E+GEALG++DF+R KL+G+RF V+ G A L+RA+ Sbjct: 118 HDNVVVYQEGEERQLPFPARPHWELGEALGILDFERGVKLAGSRFYVMRGAGARLQRAVI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q+++DLH + GY E+ P +V++ ++ +GQ+PKF D+++ G WL+PT+EV LT Sbjct: 178 QWLLDLHLRQ-GYQEIYTPFVVKESVLWASGQLPKFRDNLYRDEESGLWLVPTAEVPLTG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY+ EI+E+ LP+ P FR E SAGRD RG+ R HQF K E+ + E+S+ Sbjct: 237 LYADEILEASQLPIYHAAYTPCFRKEQLSAGRDVRGIKRGHQFDKVEMYMFVKPEESYQA 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE + L L +R LCT DLGF + KTYD+EVW G + E+SSCS Sbjct: 297 LEKLRRDAEECARLLGLPFRTKLLCTADLGFGSTKTYDIEVWAPGVGEWLEVSSCSNVEA 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR +F HTLNGSG+ + R +IAI+ENY DGS+ IP VLRPYM Sbjct: 357 FQARRANIRYRPEPGAKPEFVHTLNGSGLGLPRTIIAIMENYQQEDGSILIPEVLRPYMG 416 Query: 419 NLAVI 423 + I Sbjct: 417 GMERI 421 >gi|227878024|ref|ZP_03996017.1| seryl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256850727|ref|ZP_05556150.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|227862378|gb|EEJ69904.1| seryl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256712440|gb|EEU27438.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] Length = 435 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 191/438 (43%), Positives = 266/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++ +D K R + K E ++A+RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDAKRRQDLTKSEQLKAKRNDVSKQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + +++ L+KE E+ ++ +PN P + PIG Sbjct: 61 EKKR--NKEDASDAIAAMREVGKEIKDLDKEVAELTEKQNYILLRLPNFPADSDPIGPDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + H++IG LG++D+DRA+K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWHPTTEFNFKPKAHWDIGTDLGILDWDRASKVSGARFVYYIGAGALLERAVF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T E GYTE+ P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKE-GYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 238 AEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGRC+ AILENY N DGSVT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRCVAAILENYQNEDGSVTVPD 416 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 417 VLVPYMNGMKKITKESGL 434 >gi|270159162|ref|ZP_06187818.1| seryl-tRNA synthetase [Legionella longbeachae D-4968] gi|289166007|ref|YP_003456145.1| Seryl-tRNA synthetase [Legionella longbeachae NSW150] gi|269987501|gb|EEZ93756.1| seryl-tRNA synthetase [Legionella longbeachae D-4968] gi|288859180|emb|CBJ13112.1| putative Seryl-tRNA synthetase [Legionella longbeachae NSW150] Length = 428 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 184/427 (43%), Positives = 276/427 (64%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R P+ + L K+ + ++L+EK + L ++ ++ RN+ S IG+ Sbjct: 1 MLDIQLLRDEPQFVATQLLKKGFQFDVSSFIALEEKRKSLQVTVQSLQNERNTRSKAIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G ++ ++ + + L ++L + E +V ++ + +PN+P E VP+G Sbjct: 61 AKSRG--EDIEGMREDMNRLAKELEQRKGELDDVLQQIEAIALRLPNIPHESVPVGEDEQ 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N IR G P+ + H E+G+ LG MDF A KL+G+RF V+ LA L R L Q Sbjct: 119 HNQEIRRWGIIPTFDFPVKSHDELGDGLGQMDFALAAKLTGSRFVVMKNQLARLHRGLIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+DLHT +HGY E+ P +V +++ GTGQ+PKF +D+F G +LIPT+E+ +TN Sbjct: 179 FMLDLHTQQHGYQEIYVPYIVNADSLLGTGQLPKFEEDLFKLTGDHGYYLIPTAEIPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ ++LP+R+ +P FRSEAGS G+DT+GM+RQHQF K ELV IT+ EDS+ Sbjct: 239 TVRDTLLAEENLPIRYACHSPCFRSEAGSYGKDTKGMIRQHQFEKVELVWITKPEDSYAA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+++ AE +L+RL+L YRVV+LC+GD+ SA KTYD+EVWL QN YREISSCS Sbjct: 299 LEQLVRHAEMVLQRLELPYRVVTLCSGDMSPSAAKTYDIEVWLPSQNTYREISSCSNMEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +RYR ++ + HTLNGSG+AVGR L+A++ENY + DG++ IP LRPY++ Sbjct: 359 FQARRMKARYRHEKTREINLVHTLNGSGLAVGRTLVALMENYQDKDGNIHIPMALRPYLD 418 Query: 419 NLAVIKK 425 + I++ Sbjct: 419 GIECIER 425 >gi|254468456|ref|ZP_05081862.1| seryl-tRNA synthetase [beta proteobacterium KB13] gi|207087266|gb|EDZ64549.1| seryl-tRNA synthetase [beta proteobacterium KB13] Length = 425 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 198/427 (46%), Positives = 267/427 (62%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DI +R + L+ LK R + + SL+E+ + + K ++++ RN S Q+G Sbjct: 1 MIDISLLRNDIGSLEKILKHRGFDLDVNFFNSLEEERKRIQIKTQELQQERNDLSKQVGV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++G + N+ S + Q E + + L + IPNVP E VP+G Sbjct: 61 LKSQGK--DASDVLNKVSNISAQSKEFELQLALIQEKLNNFLLLIPNVPHESVPLGPDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L++ VG P ++H ++G LG +DFD A K+SG+RF + +A L RA+GQ Sbjct: 119 SNELVKEVGTLPEFDFEVKDHVDLGAPLG-LDFDTAAKVSGSRFVFMKNDIARLHRAIGQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSL 236 FMID HT HGYTE P LV +++ GTGQ+PKF DD+F T +LIPTSEVSL Sbjct: 178 FMIDTHTENHGYTEYYTPYLVNGDSLLGTGQLPKFGDDLFVTQKNDDESLYLIPTSEVSL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN EII++K LP+R T P FRSEAGS G+DTRGM+RQHQF K E+V IT+ E S+ Sbjct: 238 TNSVRDEIIDAKHLPIRMTAHTPCFRSEAGSYGKDTRGMIRQHQFDKVEMVQITKPELSY 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E MLS AE ILK LDL YRV++L +GD+GF A KTYD+EVWL Q YREISS S C Sbjct: 298 EALEEMLSHAENILKALDLPYRVMTLSSGDMGFGAAKTYDIEVWLPSQEQYREISSISNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR+ +R+++ K+ HTLNGSG+AVGR L+AI+EN ADGS+ IP+ L+PY Sbjct: 358 EDFQARRLKARFKNQEGKNT-LVHTLNGSGLAVGRTLVAIMENNQKADGSINIPSALQPY 416 Query: 417 MNNLAVI 423 M N I Sbjct: 417 MKNKTTI 423 >gi|261856154|ref|YP_003263437.1| seryl-tRNA synthetase [Halothiobacillus neapolitanus c2] gi|261836623|gb|ACX96390.1| seryl-tRNA synthetase [Halothiobacillus neapolitanus c2] Length = 431 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 201/425 (47%), Positives = 273/425 (64%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R +PE + L +R +L+ + + + E ++A RNS S IG+ Sbjct: 1 MLDPKLVRTDPEAVAAQLARRGFTFDVARFAALENERKQVQVDTEQMQAERNSRSKLIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + +L E L ++L ++ E+ S L L S +PN+P E+VP G Sbjct: 61 MKAAG--EDISSLMAEIGGLGQKLDQAKQRLGEIQSELDALFSLVPNLPAEDVPFGEDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 NI +R G + ++H +G ALG M+F++A KL+G+RF L G LA L RAL Q Sbjct: 119 GNIEVRRWGTPKTFDFNVQDHVALGAALG-MNFEQAVKLTGSRFVTLAGDLARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+DLH+++HGYTE+ P +V D++++GTGQ+PKF +D+F +LIPT+EV LTN Sbjct: 178 FMLDLHSNQHGYTEMYVPYIVNDKSLFGTGQLPKFGEDLFALNGDADWYLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L E++ + LP R+ PSFR+EAG+AGRDTRGM+RQHQF K ELV I R EDS Sbjct: 238 LVRDELLSANDLPRRYVAHTPSFRAEAGAAGRDTRGMIRQHQFDKVELVQIVRAEDSAAA 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + S AE +L+ L+L YRV+ LCTGD+GFSA KTYDLEVWL GQN YREISSCS C + Sbjct: 298 LEALTSHAEAVLQALELPYRVMQLCTGDMGFSAAKTYDLEVWLPGQNTYREISSCSNCTD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +R RD SK + HTLNGSG+AVGR L+A+LEN+ ADGS+ +P LRPY Sbjct: 358 FQARRLQARVRDAESK-PQLVHTLNGSGLAVGRTLVALLENHQQADGSIALPLALRPYFQ 416 Query: 419 NLAVI 423 I Sbjct: 417 GRTAI 421 >gi|116493174|ref|YP_804909.1| seryl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|122265362|sp|Q03EA5|SYS_PEDPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116103324|gb|ABJ68467.1| seryl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] Length = 426 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 185/430 (43%), Positives = 270/430 (62%), Gaps = 8/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + E + L R ++P+ + +L+ D + R LI K E+++ RN S QI Sbjct: 1 MLDLKMIRNHVEDVKAKLATRGVKPEAIDDLLAKDNERRELIVKSENLKKLRNEVSDQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N + E + + + L+++ + ++ + +PN+P E+VP+ + Sbjct: 61 QLKR--NKEDANDKIQEMRKVSQDIKGLDEQLENIAEEVESKAAHLPNLPHEDVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ R G + + H+EIGE LG++DF+RA K++G+RF G A LERA+ Sbjct: 119 EGSVEQRRNGTPRTFDFTPKAHWEIGEELGILDFERAAKVAGSRFVYYVGDGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD---MFCTTDGRWLIPTSEVSL 236 F +D + + G+TE P +V D +M+GTGQ PKF + +G LIPT+EV L Sbjct: 179 NFFLDQN-NAAGFTEEITPYMVNDASMFGTGQFPKFKETHAGYEVKDEGLTLIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y EII+ + LP+ T L+P+FRSEAGSAGRDTRG++R HQF K E+V I + E S+ Sbjct: 238 VNYYRDEIIDEEKLPISVTALSPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKIAKPEQSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ + AE +L++L L YRV++L TGD+ F+A KTYDLEVW+ Q+ YREISSCS C Sbjct: 298 NELEKLTTHAETLLQKLGLPYRVITLTTGDMSFTAAKTYDLEVWIPAQDKYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + R+RD N K L++ HTLNGSG+AVGR + AILENY N DG+V +P L PY Sbjct: 358 TDFQARRAHIRFRDENGK-LQYVHTLNGSGLAVGRTVAAILENYQNEDGTVNVPEALVPY 416 Query: 417 MNNLAVIKKE 426 M VI K+ Sbjct: 417 MQGTTVIGKK 426 >gi|256844211|ref|ZP_05549698.1| seryl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|262047844|ref|ZP_06020793.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|312976669|ref|ZP_07788418.1| serine--tRNA ligase [Lactobacillus crispatus CTV-05] gi|256614116|gb|EEU19318.1| seryl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|260571837|gb|EEX28409.1| seryl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|310895997|gb|EFQ45062.1| serine--tRNA ligase [Lactobacillus crispatus CTV-05] Length = 435 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 191/438 (43%), Positives = 266/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++ +D K R + K E ++A+RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDTKRRKDLTKSEQLKAKRNDVSKQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + +++ L+KE E+ ++ +PN P + PIG Sbjct: 61 EKKR--NKEDASDAIAAMREVGKEIKDLDKEVAELTEKQNYILLRLPNFPADSDPIGPDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + H++IG LG++D+DRA+K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWHPTTEFNFKPKAHWDIGTDLGILDWDRASKVSGARFVYYIGAGALLERAVF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T E GYTE+ P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKE-GYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 238 AEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGRC+ AILENY N DGSVT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRCVAAILENYQNEDGSVTVPD 416 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 417 VLVPYMNGMKKITKESGL 434 >gi|306821728|ref|ZP_07455324.1| serine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550197|gb|EFM38192.1| serine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 425 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 179/428 (41%), Positives = 272/428 (63%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ I+++ E + + KR + + ++ LD+K L++++E ++ ++N++S I Sbjct: 1 MLDIRRIKKDKEQILKLMAKRGEKDFSLDEVIELDDKRIALLQEVEVLKNKQNTDSKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 EG + L E L + + +L+++ E ++L + + IPNVP E VPIGT+ Sbjct: 61 VYKKEGKDT--APLMEELKKLSDDIAVLDEKVKETENTLNEKMLGIPNVPNENVPIGTTD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G+ + H++IG L ++DF+RA K++G RF++ G A LER++ Sbjct: 119 EDNVEVRKYGEPTKFDFEPKAHWDIGTNLDILDFERAGKITGTRFTLYKGAGARLERSVI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 F +D HT +HGYTEV P + D++ GTGQ+PKF +DMF +L+PT+EV +TN Sbjct: 179 SFFLDTHTEKHGYTEVIPPFMANDKSFIGTGQLPKFEEDMFKVDKTNYYLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ + L +++ P FR+EAGSAGRDTRG++RQHQF K ELV T+ EDS+ E Sbjct: 239 IHRDEILSADELTIKYCAYTPCFRAEAGSAGRDTRGLIRQHQFNKVELVKFTKPEDSYAE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AE +L+ L + YR+V +C+GDLGF+A YD+EVW+ N Y EISSCS + Sbjct: 299 LESLTHDAETMLQMLKIPYRIVKICSGDLGFTAAFKYDIEVWMPSYNRYVEISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N +++ + ++ HTLNGSG+AVGR + AILEN NADGSVTIP VL YM Sbjct: 359 FQARRANIKFKRDKASKPEYVHTLNGSGLAVGRTVAAILENCQNADGSVTIPEVLVKYM- 417 Query: 419 NLAVIKKE 426 I K+ Sbjct: 418 GTDKITKK 425 >gi|308179597|ref|YP_003923725.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045088|gb|ADN97631.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 423 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 191/426 (44%), Positives = 271/426 (63%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+ +++R N E + L+ R ++P + + L LD++NR I K+E ++ ++N + QIG Sbjct: 1 MLNPKFVRNNSELVKAKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q ++ AL + L + E + EV L L PN+P ++VP+G Sbjct: 61 Q--SDPQSEAGQALIQQVKQLNGDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ +R G P+ + H+E+GE+LG++DFDRA K++GARF A LERA+ Sbjct: 119 DSNVEMRKHGDIPTFEFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDAGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FM+DLH + GY E+ P LV + MYGTGQ PKF +D++ LIPT+EV LTN Sbjct: 179 SFMLDLHIQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVYTVESSGMTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI+ LP FT + P +RSEAGSAGRDTRG++R HQF K E+V + E+S+ E Sbjct: 239 YYANEILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEE+L+ L L Y V+ L TGD GFS+ KTYD+EVW+ Q +YREISSCS C + Sbjct: 299 LEKLTDNAEEVLRELGLAYHVIKLSTGDTGFSSAKTYDVEVWMPEQGVYREISSCSNCLD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR + ++ + HTLNGSG+AVGR + AILENY ADG+V IP VL+PYM+ Sbjct: 359 FQARRAMIRYRKADG-TVDYVHTLNGSGLAVGRTVAAILENYQQADGTVKIPKVLQPYMH 417 Query: 419 NLAVIK 424 + IK Sbjct: 418 GMTEIK 423 >gi|310815836|ref|YP_003963800.1| seryl-tRNA synthetase [Ketogulonicigenium vulgare Y25] gi|308754571|gb|ADO42500.1| seryl-tRNA synthetase [Ketogulonicigenium vulgare Y25] Length = 444 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 210/443 (47%), Positives = 271/443 (61%), Gaps = 14/443 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R + P S IL+LDE R I E A +N S ++G Sbjct: 1 MHDIRAIRENPTAFDAALGRRGISPVSSQILALDEGRRARILAAETATAEQNRASKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A GN + + L+ + K ++ L E L + ++ IPN+P ++VP G N Sbjct: 61 AKAAGNEAEFERLRALVAEKKAEVARLTDEAKAEDLRLNEFLAAIPNLPYDDVPDGVDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G EH++I +DFD KLSGARF VL G A L RAL Q Sbjct: 121 DNVEIRRWGTPRVFDFAPVEHYQIPAVAADLDFDTGGKLSGARFVVLKGAAARLHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID H EHG EV P+LVR E MYGTGQ+PKF +D + TT+G WLIPT+EV+LTN Sbjct: 181 FMIDTHVDEHGLLEVQTPVLVRPEMMYGTGQLPKFGEDSYETTNGWWLIPTAEVTLTNTV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRS--------------EAGSAGRDTRGMLRQHQFWKCEL 286 + ++++ +LP+R T FRS EAGSAGRDT GMLRQHQF K E+ Sbjct: 241 NGDLLDETALPIRMTADTQCFRSPPPPPPADTQCFRSEAGSAGRDTAGMLRQHQFEKVEM 300 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 VS+ + S EH+RM +CA+ IL++L L YR + LC GD+G A +T+DLEVWL GQ Sbjct: 301 VSVVAPDQSEAEHDRMTTCAQNILEKLGLPYRTMKLCAGDMGAGARRTHDLEVWLPGQTR 360 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 YREISS STCG++Q+RRMN+R+R +F HTLNGSG+AVGR LIA+LEN ADGS Sbjct: 361 YREISSVSTCGDYQARRMNARFRPAGGGKPEFLHTLNGSGLAVGRTLIAVLENGQQADGS 420 Query: 407 VTIPTVLRPYMNNLAVIKKEHIL 429 VT+P VL Y+ I E L Sbjct: 421 VTLPAVLSHYLGGKTRITAEGKL 443 >gi|227509920|ref|ZP_03939969.1| seryl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190640|gb|EEI70707.1| seryl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 427 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 192/431 (44%), Positives = 272/431 (63%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR++P++ L R ++ + + +L D K R LI K E ++A RN S +I Sbjct: 1 MLDIKKIRKDPDYTKEKLATRGVKAETIDELLGFDAKRRDLIVKSESLKATRNDVSDKIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N E + + L+++ H++ L + +PN+P ++VP+ + Sbjct: 61 QLKR--NKEDASEAIAEMKKTGQTIKDLDEQLHQIEIDENDLAAHLPNIPADDVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + ++ +R VG+ PS + H++IGE LG++DF+RA K+SG+RF G A LERA+ Sbjct: 119 DGSVELRRVGETPSFGFKPKHHWDIGENLGILDFERAAKVSGSRFVYYMGDGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD---MFCTTDGRWLIPTSEVSL 236 F +D +T E GY EV P +V +MYGTGQ PKF + T +IPT+EV L Sbjct: 179 NFYLDQNT-EAGYQEVIPPYMVNGASMYGTGQFPKFLESKAGYEITGTDLTMIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y +EII + LP+ FT L+P+FRSEAGSAGRDT+G++R HQF K E+V T+ EDS+ Sbjct: 238 VNYYRNEIIPEEKLPVSFTALSPAFRSEAGSAGRDTKGLIRLHQFNKVEMVKFTKSEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E++ AE+ LK+L L Y V++L T D+ F+A T+DLEVW Q+ YREISSCS Sbjct: 298 DALEQITHQAEDNLKKLGLAYHVITLTTSDMSFTAAMTHDLEVWFPAQDKYREISSCSNT 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + +YRD + K L + HTLNGSG+AVGR + AILENY N DGSVTIP VLRPY Sbjct: 358 TDFQARRAHIQYRDEDGK-LHYVHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPY 416 Query: 417 MNNLAVIKKEH 427 M+ I+K+H Sbjct: 417 MHGKTKIEKQH 427 >gi|293381923|ref|ZP_06627889.1| seryl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|290921510|gb|EFD98546.1| seryl-tRNA synthetase [Lactobacillus crispatus 214-1] Length = 435 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 191/438 (43%), Positives = 265/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++ +D K R + K E ++A+RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDAKRRQDLTKSEQLKAKRNDVSKQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + +++ L+KE E+ ++ +PN P + PIG Sbjct: 61 EKKR--NKEDASDAIAAMREVGKEIKDLDKEVAELTEKQNYILLRLPNFPADSDPIGPDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + H++IG LG++D+DRA+K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWHPTTEFNFKPKAHWDIGTDLGILDWDRASKVSGARFVYYIGAGALLERAVF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T E GYTE+ P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKE-GYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + Sbjct: 238 AEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCE 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGRC+ AILENY N DGSVT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRCVAAILENYQNEDGSVTVPD 416 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 417 VLVPYMNGMKKITKESGL 434 >gi|187934733|ref|YP_001884277.1| seryl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|238691597|sp|B2THC5|SYS_CLOBB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|187722886|gb|ACD24107.1| serine--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 425 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 173/428 (40%), Positives = 270/428 (63%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR NPE + L R + + I++LDE+ R ++ ++E ++++RN SA+ Sbjct: 1 MLDLKRIRNNPEEIKKLLSNRGEDFDVAVIDEIVTLDEERRKILVEVESLKSKRNQVSAE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G V + N+ L E++ + +E+ ++ ++ IPN+P EVP G Sbjct: 61 IPKLKKAG--EDVTEIMNDMRKLGEEIKNFDTRVNEINERIEYIMLRIPNIPNPEVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N+ I+ G+ + H+++G L ++DF+R K++G+RF+V G A LER+ Sbjct: 119 TDEDNVEIKKWGEPTKFNFEPKAHWDLGTDLNILDFERGGKVAGSRFTVYKGLGARLERS 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT+E+GYTE+ P +V ++M GTGQ+PKF +D F + + IPT+EV + Sbjct: 179 IINYFLDKHTTENGYTEILPPYMVNRDSMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y +E++ LP++ + FR+EAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 TNMYRNEVLSGDILPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKVELVKFCKPEDSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E ++++ AE +L+ L L YR+V +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 AELDKLVEDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +YR+ KF HTLNGSGVA+GR + A+LENY DG+V IP ++ + Sbjct: 359 EDFQARRANIKYRETPKDKPKFIHTLNGSGVAIGRTVAAVLENYQKEDGTVEIPEAIKRF 418 Query: 417 MNNLAVIK 424 MN + IK Sbjct: 419 MN-VDFIK 425 >gi|120612410|ref|YP_972088.1| seryl-tRNA synthetase [Acidovorax citrulli AAC00-1] gi|166200589|sp|A1TTM6|SYS_ACIAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|120590874|gb|ABM34314.1| seryl-tRNA synthetase [Acidovorax citrulli AAC00-1] Length = 439 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 194/443 (43%), Positives = 269/443 (60%), Gaps = 23/443 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ + L+ R Q E SL+ + + L + E++++RRN S Q Sbjct: 1 MLDILLLRKDLDSAIARLETRKKPQAFLQVEAFQSLESERKTLQTRTEELQSRRNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +GQ A G DA+ E LK +L ++ + L L+ +PN+P E VP+G+ Sbjct: 61 VGQLKARG--ENADAVMAEVGGLKAELENSAARLEQIQAELHTLLVAVPNLPHESVPVGS 118 Query: 118 SANENILIRSV----GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + N+ +R +++H ++GE LG +DFD KLSG+RF+V+ G +A Sbjct: 119 DESGNVEVRRWSPDGQDPKPLGFPAKDHVDLGEPLG-LDFDMGVKLSGSRFTVMKGPIAR 177 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------------C 221 L RAL QFM+D+ T EHGYTE P +V +++ GTGQ+PKF D+F Sbjct: 178 LHRALAQFMLDVQTREHGYTECYVPYVVNADSLRGTGQLPKFEGDLFAAKKGGQDGEPVP 237 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 +LIPTSEV LTN +++ LP+R T P FRSEAGS GRDTRGM+RQHQF Sbjct: 238 DNAALYLIPTSEVPLTNFVRDQVVPESELPIRLTAHTPCFRSEAGSYGRDTRGMIRQHQF 297 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E+V IT + S+ E M AE +L++L L YRV+SLCTGD+GF A KTYDLEVWL Sbjct: 298 DKVEMVQITHPDRSYEALEEMTGHAEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWL 357 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 QN YREISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LENY Sbjct: 358 PAQNTYREISSVSNCEAFQARRLQARFKNAQGKN-ELVHTLNGSGLAVGRTLVAVLENYQ 416 Query: 402 NADGSVTIPTVLRPYMNNLAVIK 424 ADGSV +P LRPY+ +V++ Sbjct: 417 QADGSVAVPEALRPYLGGDSVLR 439 >gi|161507947|ref|YP_001577911.1| seryl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|172048352|sp|A8YWU9|SYS_LACH4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|160348936|gb|ABX27610.1| Seryl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 435 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 189/438 (43%), Positives = 266/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++ +D K R + K E ++A+RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDAKRRKDLTKSEQLKAKRNDVSKQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + +++ L+KE E+ ++ +PN P + PIG Sbjct: 61 EKKR--NKEDASDAIQAMREVGKEIKDLDKEVAELTEKQNYILLRLPNFPADSDPIGPDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H++IG LG++D+DRA+K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWNEPTKFDFKPKAHWDIGTDLGILDWDRASKVSGARFVYYIGAGALLERAVF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKD-GYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 238 AEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ +TYDLEVW+ Q+ YREIS Sbjct: 298 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSARTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGR + AILENY N DGSVT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRAVAAILENYQNEDGSVTVPD 416 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 417 VLVPYMNGMKKITKESGL 434 >gi|296114988|ref|ZP_06833632.1| seryl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295978450|gb|EFG85184.1| seryl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 425 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 210/424 (49%), Positives = 286/424 (67%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ +R +P+ D L +R P + +L LD R +++ +A+R + S ++G Sbjct: 1 MHDLRALRADPDAFDADLTRRGEAPVAHVLLELDRDRRAAETALQECQAQRKTLSKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + A++ +++ L++++ L + ++ + L+ + C+PN VP G + Sbjct: 61 LRRTG--ADSSAVEAKSAALRDRMEELSTQVADLDTKLRGTLECLPNRLDAGVPDGRDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++ G ++EHFE+GEALGLMDF+ A++LSGARF VL G LA +ERALGQ Sbjct: 119 ANVVCHIWGTVREMGFPAKEHFELGEALGLMDFETASRLSGARFVVLRGALARMERALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT E+GY E + P+LV DEAMYGT ++PKFAD F TTDGRWL+PT+EV LT Sbjct: 179 FMLDLHTRENGYDETAVPVLVNDEAMYGTDKLPKFADQSFRTTDGRWLVPTAEVPLTASV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI+ + +LP R L+ FRSEAG+AGRDTRGMLRQHQF K E+VSIT EDS EHE Sbjct: 239 AGEILSADTLPRRMVALSSCFRSEAGAAGRDTRGMLRQHQFQKVEMVSITAPEDSEAEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +L+RL + YR + LC GD GF A +T+DLE WL GQ +REISSCST +FQ Sbjct: 299 RMTRCAEMVLERLGVPYRRMLLCAGDTGFGAARTFDLEAWLPGQKAWREISSCSTTRDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + K F HTLNGSG+AVGR LIA++EN N DGS+T+P VLRPYM Sbjct: 359 ARRMNARYRAADGK-PAFVHTLNGSGLAVGRTLIAVMENGQNEDGSITVPEVLRPYMGGT 417 Query: 421 AVIK 424 +I+ Sbjct: 418 DIIR 421 >gi|163743213|ref|ZP_02150595.1| seryl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] gi|161383630|gb|EDQ08017.1| seryl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] Length = 430 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 204/429 (47%), Positives = 281/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R S IL+LDE R I+ E +A +N + IG Sbjct: 1 MHDIRAIRENPAAFDAALARRGDAAMSSDILALDESRRAKIQAAETAQADQNKAAKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ E + K ++ L+ E E+ + L +++ IPN+P E+VP G + Sbjct: 61 AKAKGDDAEFERLRAEVAGKKAEVAALQTEAKELDAKLTDVLARIPNLPAEDVPQGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G P+ +EHF+I MDF+ A K+SGARF +L G +A + RAL Q Sbjct: 121 DNVEVSKWGAIPNFAFDPKEHFDIKGVSAAMDFETAAKISGARFVLLKGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G TEV++P+LVRDEAMYGT ++PKF DD + TT+G WL+PTSEV LT Sbjct: 181 FMVDTHVDENGLTEVNSPVLVRDEAMYGTDKLPKFGDDSYQTTNGWWLVPTSEVPLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + + ++ +LP+R T FRSEAGSAG+DT GMLRQHQF K E+VS+ S E + Sbjct: 241 AGDTLDEAALPIRMTAHTLCFRSEAGSAGKDTSGMLRQHQFEKVEMVSVVHPTQSDDEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE IL++L + YR V LCTGD+GF A +T+D+E W+ GQN YREISS ST G+FQ Sbjct: 301 RMLRCAEGILEKLGIPYRTVVLCTGDMGFGARRTFDIEAWVPGQNTYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + ++ HTLNGSG+AVGRCLIA+LEN DGSV +P VL PY+ Sbjct: 361 ARRMNARFKPADGGKPEYLHTLNGSGLAVGRCLIAVLENGQQEDGSVKLPEVLAPYLGGR 420 Query: 421 AVIKKEHIL 429 + E L Sbjct: 421 LSLTAEGAL 429 >gi|56479428|ref|YP_161017.1| seryl-tRNA synthetase [Aromatoleum aromaticum EbN1] gi|67461652|sp|Q5NXU8|SYS_AZOSE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|56315471|emb|CAI10116.1| Seryl-tRNA synthetase [Aromatoleum aromaticum EbN1] Length = 427 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 191/430 (44%), Positives = 265/430 (61%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + + AL R + S++ + + L + +D++ARRN+ S QIG Sbjct: 1 MLDIQLLRTQIDAVAAALAARGANFDAAAFQSMENERKTLQTRTQDLQARRNTLSKQIGV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + G A E + ++L E+ + + ++ +PN+P + VP G + Sbjct: 61 LKSRG--EDASAAMAEVGGIGDELKANEQALATLLERINAFVAGLPNLPHDSVPPGRDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ I G +H +IG LG +DF+ A K+SG+RF+++ LA L RAL Q Sbjct: 119 ANVEIARWGTPREFDFEVSDHVDIGSGLGGLDFETAAKISGSRFALMRDGLARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSLT 237 FM+D+HT EHGYTEV P LV ++M+GTGQ+PKF ++F +LIPT+EV +T Sbjct: 179 FMLDVHTREHGYTEVHVPYLVNPDSMFGTGQLPKFEAELFSVMKDDGRFYLIPTAEVPIT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+ +E++ LPL+F P FRSEAGS GRDTRGM+RQHQF K ELV I + S+ Sbjct: 239 NIVRNELLAHDVLPLKFVGHTPCFRSEAGSYGRDTRGMIRQHQFDKVELVRIEHPDASWA 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E + AE IL++L+L YR V LCTGD+GFSA KTYDLEVWL Q YREISSCS G Sbjct: 299 ALEELTGHAEAILRKLELPYRKVVLCTGDMGFSAAKTYDLEVWLPAQKTYREISSCSCTG 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RRM +R+R+ K+ + HTLNGSG+AVGR L+A+LENY ADGSV +P VL P+M Sbjct: 359 AFQARRMQARFRNTQGKN-ELVHTLNGSGLAVGRTLVAVLENYQQADGSVVVPKVLVPWM 417 Query: 418 NNLAVIKKEH 427 + V++ Sbjct: 418 GGIEVLEPRG 427 >gi|315038965|ref|YP_004032533.1| seryl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|325957391|ref|YP_004292803.1| seryl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|312277098|gb|ADQ59738.1| seryl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|325333956|gb|ADZ07864.1| seryl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|327184099|gb|AEA32546.1| seryl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 435 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 190/438 (43%), Positives = 266/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++ +D K R + K E ++A+RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDTKRRKDLTKSEQLKAKRNDVSKQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + +++ L+KE E+ ++ +PN P + P+G Sbjct: 61 EKKR--NKEDASDAIAAMREVGKEIKDLDKEVDELTEKQNYILLRLPNFPADSDPVGPDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H++IG LG++D+DRA K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWEEPTKFDFKPKAHWDIGTDLGILDWDRAAKVSGARFVYYIGAGALLERAVF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKD-GYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 238 AEVPLVNYFRNEIIHGDKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGRC+ AILENY N DGSVT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRCVAAILENYQNEDGSVTVPD 416 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 417 VLVPYMNGMKKITKESSL 434 >gi|254374079|ref|ZP_04989561.1| seryl-tRNA synthetase [Francisella novicida GA99-3548] gi|151571799|gb|EDN37453.1| seryl-tRNA synthetase [Francisella novicida GA99-3548] Length = 426 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 285/428 (66%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I+ N + + L R + + ++K + L ++ +D++++RN+ S +IGQ Sbjct: 1 MLDAKYIKDNLQQVAEKLATRGYQFDIAEFEAQEQKRKHLQERTQDLQSQRNTISKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G + + + + E+L I+EKE ++ ++ + + +PN+P ++VP+G N Sbjct: 61 KKAKG--EDTSDIFAKVNQINEELKIIEKELKDLQDTINQTLLSMPNLPADDVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ IR G +++H +IGE L ++DF A K++G+RF VL +A L RAL Sbjct: 119 DNVEIRRWGTPREFHPEAPAKDHADIGEILKMIDFKAAAKVTGSRFMVLKNKIAKLHRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+DLHT +HGY E+ P LV ++++YGTGQ+PKFA D+F LIPT+EV + Sbjct: 179 SQFMLDLHTEKHGYEELYVPYLVNNDSLYGTGQLPKFAADLFKLEGDFEYSLIPTAEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI+++++LP +T P FRSEAGS GRDT+GM+RQHQF K ELV IT + Sbjct: 239 TNLVRDEILDTETLPRYYTAHTPCFRSEAGSYGRDTKGMIRQHQFEKVELVHITTADKGE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + S AE++L++L+L YRV+ LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 ESLELLTSHAEKVLQKLNLPYRVMKLCTGDMGFSAKKTYDLEVWLPSQNTYREISSCSWC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+++P+ K + HTLNGSG+AVGR L+AI+ENY DGS+ +P L Y Sbjct: 359 GDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIENYQQEDGSIMVPDALIKY 418 Query: 417 MNNLAVIK 424 M ++VIK Sbjct: 419 MGGISVIK 426 >gi|56708386|ref|YP_170282.1| seryl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670857|ref|YP_667414.1| seryl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|134302372|ref|YP_001122341.1| seryl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|187931980|ref|YP_001891965.1| seryl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|224457515|ref|ZP_03665988.1| seryl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254371010|ref|ZP_04987013.1| seryl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC033] gi|254875208|ref|ZP_05247918.1| seryl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|67461645|sp|Q5NFB0|SYS_FRATT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|122970886|sp|Q14GR3|SYS_FRAT1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166222727|sp|A4IZ69|SYS_FRATW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238691511|sp|B2SDH2|SYS_FRATM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|56604878|emb|CAG45963.1| Seryl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321190|emb|CAL09346.1| Seryl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|134050149|gb|ABO47220.1| seryl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|151569251|gb|EDN34905.1| seryl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC033] gi|187712889|gb|ACD31186.1| seryl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|254841207|gb|EET19643.1| seryl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282160006|gb|ADA79397.1| seryl-tRNA synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 426 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 285/428 (66%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I+ N + + L R + + ++K + L ++ +D++++RN+ S +IGQ Sbjct: 1 MLDAKYIKDNLQQVAEKLATRGYQFDIAEFEAQEQKRKHLQERTQDLQSQRNTISKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G + + + + E+L I+EKE ++ ++ + + +PN+P ++VP+G N Sbjct: 61 KKAKG--EDTSDIFAKVNQINEELKIIEKELKDLQDTINQTLLSMPNLPADDVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ IR G +++H +IGE L ++DF A K++G+RF VL +A L RAL Sbjct: 119 DNVEIRRWGTPREFHPEAPAKDHSDIGEILKMIDFKAAAKVTGSRFMVLKNKIAKLHRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+DLHT +HGY E+ P LV ++++YGTGQ+PKFA D+F LIPT+EV + Sbjct: 179 SQFMLDLHTEKHGYEELYVPYLVNNDSLYGTGQLPKFAADLFKLEGDFEYSLIPTAEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI+++++LP +T P FRSEAGS GRDT+GM+RQHQF K ELV IT + Sbjct: 239 TNLVRDEILDTETLPRYYTAHTPCFRSEAGSYGRDTKGMIRQHQFEKVELVHITTADKGE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + S AE++L++L+L YRV+ LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 ESLELLTSHAEKVLQKLNLPYRVMKLCTGDMGFSAKKTYDLEVWLPSQNTYREISSCSWC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+++P+ K + HTLNGSG+AVGR L+AI+ENY DGS+ +P L Y Sbjct: 359 GDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIENYQQEDGSIMVPDALIKY 418 Query: 417 MNNLAVIK 424 M ++VIK Sbjct: 419 MGGISVIK 426 >gi|33597976|ref|NP_885619.1| seryl-tRNA synthetase [Bordetella parapertussis 12822] gi|33602882|ref|NP_890442.1| seryl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|46577215|sp|Q7W545|SYS_BORPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|46577216|sp|Q7WCM7|SYS_BORBR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|33574405|emb|CAE38743.1| seryl-tRNA synthetase [Bordetella parapertussis] gi|33577324|emb|CAE35881.1| seryl-tRNA synthetase [Bordetella bronchiseptica RB50] Length = 451 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 195/453 (43%), Positives = 269/453 (59%), Gaps = 30/453 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R++ + + LK R ++ L+ + + + + E +ARRN+ + QIGQ Sbjct: 1 MLDPILLRKDLQTVVDRLKSRGVDFDIARFNELESRRKAVQTETESQQARRNALAKQIGQ 60 Query: 61 AIAEGNLS-LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +G V A+ E+ L +L LE E + + L L+ +PN+P VP G S+ Sbjct: 61 LKGKGAPEAEVQAVMAESQALPARLKALEDELAQTQAQLNDLLMSVPNLPHASVPQGASS 120 Query: 120 NENILIRSVGKKPSAI--------HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 +EN+ +R + R+H +GE LG +DFD A +LSGARFS + G + Sbjct: 121 DENVEVRRWLPGAADERGNPAALGFEVRDHVAVGEPLG-LDFDLAARLSGARFSFMRGQM 179 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------- 222 A L RAL QFM+DL T HGYTE P +V ++GTGQ+PKF DDMF Sbjct: 180 ARLHRALAQFMLDLQTGTHGYTECYTPYIVNSSTLFGTGQLPKFKDDMFFVTKGGGDDEP 239 Query: 223 ----------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + ++LI TSE++LT++ I+ LPLR T P FRSEAGS GRDT Sbjct: 240 KVDEQGNPLAREDQYLISTSEITLTSVVRETIVAGADLPLRLTAHTPCFRSEAGSGGRDT 299 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 RGM+RQHQF K E+V I E S+ E M+ AE +L+ L+L YRV+ LCTGD+GF + Sbjct: 300 RGMIRQHQFDKVEMVQIAHPEHSYEALEEMVGHAERVLQLLELPYRVMLLCTGDMGFGSA 359 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 KTYDLEVWL Q+ +REISS S C FQ+RRM +R+R+ +K ++ HTLNGSG+AVGR Sbjct: 360 KTYDLEVWLPAQDTWREISSVSNCETFQARRMQARFRNAQNK-PEYVHTLNGSGLAVGRA 418 Query: 393 LIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 L+A+LEN ADGSV +P VL+PYM L V++ Sbjct: 419 LVAVLENCQQADGSVRVPAVLQPYMGGLTVLEP 451 >gi|33593453|ref|NP_881097.1| seryl-tRNA synthetase [Bordetella pertussis Tohama I] gi|46577212|sp|Q7VW08|SYS_BORPE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|33572809|emb|CAE42742.1| seryl-tRNA synthetase [Bordetella pertussis Tohama I] gi|332382862|gb|AEE67709.1| seryl-tRNA synthetase [Bordetella pertussis CS] Length = 451 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 195/453 (43%), Positives = 269/453 (59%), Gaps = 30/453 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R++ + + LK R ++ L+ + + + + E +ARRN+ + QIGQ Sbjct: 1 MLDPILLRKDLQTVVDRLKSRGVDFDIARFNELESRRKAVQTETESQQARRNALAKQIGQ 60 Query: 61 AIAEGNLS-LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +G V A+ E+ L +L LE E + + L L+ +PN+P VP G S+ Sbjct: 61 LKGKGAPEAEVQAVMAESQALPARLKALEDELAQTQAQLNDLLMSVPNLPHASVPQGASS 120 Query: 120 NENILIRSVGKKPSAI--------HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 +EN+ +R + R+H +GE LG +DFD A +LSGARFS + G + Sbjct: 121 DENVEVRRWLPGAADERGIPAALGFEVRDHVAVGEPLG-LDFDLAARLSGARFSFMRGQM 179 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------- 222 A L RAL QFM+DL T HGYTE P +V ++GTGQ+PKF DDMF Sbjct: 180 ARLHRALAQFMLDLQTGTHGYTECYTPYIVNSSTLFGTGQLPKFKDDMFFVTKGGGDDEP 239 Query: 223 ----------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + ++LI TSE++LT++ I+ LPLR T P FRSEAGS GRDT Sbjct: 240 KVDEQGNPLAREDQYLISTSEITLTSVVRETIVAGADLPLRLTAHTPCFRSEAGSGGRDT 299 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 RGM+RQHQF K E+V I E S+ E M+ AE +L+ L+L YRV+ LCTGD+GF + Sbjct: 300 RGMIRQHQFDKVEMVQIAHPEHSYEALEEMVGHAERVLQLLELPYRVMLLCTGDMGFGSA 359 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 KTYDLEVWL Q+ +REISS S C FQ+RRM +R+R+ +K ++ HTLNGSG+AVGR Sbjct: 360 KTYDLEVWLPAQDTWREISSVSNCETFQARRMQARFRNAQNK-PEYVHTLNGSGLAVGRA 418 Query: 393 LIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 L+A+LEN ADGSV +P VL+PYM L V++ Sbjct: 419 LVAVLENCQQADGSVRVPAVLQPYMGGLTVLEP 451 >gi|84623645|ref|YP_451017.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|161898995|ref|YP_200755.2| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|188576837|ref|YP_001913766.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188577030|ref|YP_001913959.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|123522189|sp|Q2P3Y4|SYS_XANOM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|84367585|dbj|BAE68743.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521289|gb|ACD59234.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521482|gb|ACD59427.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 449 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 211/450 (46%), Positives = 279/450 (62%), Gaps = 29/450 (6%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ+P L L+ R + + SL+ + + + + +++++ RNS S IG Sbjct: 1 MLDPALLRQHPADLAERLRSTRGFALDTAKLESLESERKHMQVRTQELQSLRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V AL E + + ++L V L+K+ + IPN+P +VP+G S Sbjct: 61 QAKAKG--EDVAALMAEVAGVGDELLHSHGRLTVVQHELEKIYAVIPNLPHADVPLGKSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ G ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 ADNVEQSRWGTPRQFDFPVKDHVELGAPNGWLDGETAVKLSGARFTVLRGPIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-------------- 225 QFM+DLH EHGY E + PLLV ++M GTGQ+PKF DD+F + Sbjct: 179 QFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFRIYENEYEGHTDEETGESF 238 Query: 226 ------------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 +LIPTSEV LTN+ EII+++ LPLR T + FR+EAGS GRDTR Sbjct: 239 YTPTGGVDPDPAYYLIPTSEVPLTNIVRDEIIDAERLPLRMTAHSMCFRAEAGSGGRDTR 298 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 GM+RQHQF K ELV+ EDS EH+RM CAE +L++L L YR V LCTGD+GFSA K Sbjct: 299 GMIRQHQFEKVELVTACAPEDSDAEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIK 358 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 TYDLEVWL QN YREISSCS CG+FQ+RRM +R+R+P S L+ HTLNGSG AVGR + Sbjct: 359 TYDLEVWLPSQNTYREISSCSNCGDFQARRMQARWRNPVSGKLELLHTLNGSGTAVGRAM 418 Query: 394 IAILENYLNADGSVTIPTVLRPYMNNLAVI 423 IA++ENY NADGS+ +P VLRPYM + I Sbjct: 419 IAVMENYQNADGSIDVPQVLRPYMGGIERI 448 >gi|311104420|ref|YP_003977273.1| seryl-tRNA synthetase [Achromobacter xylosoxidans A8] gi|310759109|gb|ADP14558.1| seryl-tRNA synthetase [Achromobacter xylosoxidans A8] Length = 452 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 201/452 (44%), Positives = 275/452 (60%), Gaps = 31/452 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R++ + + LK R + +E L+ + + + + E ++ARRN+ + QIGQ Sbjct: 1 MLDPILLRKDLQTVVDRLKSRGVSFDTERFNELESRRKAVQTETESLQARRNALAKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G A+ E+ + +L LE+E + L +L+ +PN+P VP+G SA+ Sbjct: 61 LKAKG--EDASAVMAESQAVPVRLKQLEEELAALQQPLNELLMSVPNLPHASVPLGESAD 118 Query: 121 ENILIRSV--------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 +N+ +R G P+ +R+H IGE LG +DFD A KLSGARFS + G +A Sbjct: 119 DNVEVRRWLPGAAGADGNPPALAFEARDHVAIGEPLG-LDFDMAAKLSGARFSFMRGPIA 177 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------------ 220 L RAL QFM+DL T HGYTE P +V +YGTGQ+PKF DDMF Sbjct: 178 RLHRALSQFMLDLQTGTHGYTECYTPYIVNASTLYGTGQLPKFKDDMFAVSKGGGDDDPK 237 Query: 221 -------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + ++LI TSE++LT++ I + LPL+ T P FRSEAGS GRDTR Sbjct: 238 VDDQGKPYVREDQYLISTSEITLTSVARDTIQAAADLPLKLTAHTPCFRSEAGSGGRDTR 297 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 GM+RQHQF K E+V IT+ + S+ E M+ AE +L+ L L YRVV LCTGD+GF + K Sbjct: 298 GMIRQHQFDKVEMVQITQPDQSYEALEDMVGHAERVLQLLGLPYRVVLLCTGDMGFGSAK 357 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 TYDLEVWL QN +REISS S C FQ+RRM +R+R+ K ++ HTLNGSG+AVGR L Sbjct: 358 TYDLEVWLPAQNTWREISSVSNCETFQARRMQARFRNAQGK-PEYVHTLNGSGLAVGRAL 416 Query: 394 IAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +A+LEN+ ADGSV IP L+PYM L V+ Sbjct: 417 VAVLENHQQADGSVLIPQALQPYMGGLTVLNP 448 >gi|161344096|ref|YP_399468.2| seryl-tRNA synthetase [Synechococcus elongatus PCC 7942] gi|161621818|ref|YP_171779.2| seryl-tRNA synthetase [Synechococcus elongatus PCC 6301] gi|146345525|sp|Q8GMR7|SYS_SYNE7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase Length = 428 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 193/421 (45%), Positives = 265/421 (62%), Gaps = 5/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ +R+NPE L +RH + +LSLD++ R ++ ++AR N +GQ Sbjct: 1 MLDLRLLRENPEATQARLDRRHSSYDIQPLLSLDQQVRQWEQERTQLQARSNEIGRSVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + EG + AL+ E + LK+Q+ LE++E +V S L + +PN+P E VP+G+ Sbjct: 61 KMREGADPQSEEIAALREEGNQLKQQIADLEQQERQVRSELDTYLLTLPNLPDETVPLGS 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +EN I G H+EIGE LGL DF+R+T+++ +RF L G A LERA Sbjct: 121 SEDENREIHRWGDDRIREGEFAPHWEIGERLGLFDFERSTRIAQSRFVTLLGAGAALERA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSL 236 L FM+D T GYTEV+ P L+ ++ +GQ+PKF + C D WL PT+EV L Sbjct: 181 LIAFMLDRQT-AAGYTEVAPPYLINSASLTASGQLPKFSEESFRCDRDDLWLTPTAEVPL 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+LY EI+ + LPLR+ P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 240 TSLYRDEILSADQLPLRYCAYTPCFRREAGSYGRDTRGLIRLHQFNKVELYQFVHPDHSE 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++L+ AE IL+ L+L YR + LCTGDLGFSA KTYD+EVWL YREISSCS C Sbjct: 300 AAHQQLLANAEAILQALELPYRTIELCTGDLGFSAQKTYDIEVWLPSAGRYREISSCSNC 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR N R+++ K +F HTLNGSG+AVGR + A+LENY DGSV +P L+PY Sbjct: 360 GDFQARRANIRFKEAGQKGTRFVHTLNGSGLAVGRTMAAVLENYQQPDGSVRVPEALQPY 419 Query: 417 M 417 + Sbjct: 420 L 420 >gi|227902950|ref|ZP_04020755.1| seryl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] gi|227869299|gb|EEJ76720.1| seryl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] Length = 441 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 189/438 (43%), Positives = 267/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++ +D K R + E ++A+RN S QI Sbjct: 7 MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDTKRRKDLTMSEQLKAKRNDVSKQIA 66 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N E + +++ L+KE E+ ++ +PN P + PIG Sbjct: 67 EKKR--NKEDASDAIAEMREVGKEIKKLDKEVDELTEKQNYILLRLPNFPADSDPIGPDD 124 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+++G LG++D+DRA+K+SGARF G A LERA+ Sbjct: 125 SYNEEVRKWEEPTKFDFKPKAHWDLGTDLGILDWDRASKVSGARFVYYIGAGALLERAVF 184 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTE+ P LV D +M GTGQ PKF +D++ LIPT Sbjct: 185 NFFLDENTKD-GYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 243 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T ++P+FRSEAGSAGRDTRG++R H+F K E+V I + Sbjct: 244 AEVPLVNYFRNEIIHENKLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKICK 303 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 304 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 363 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGRC+ AILENY N DGSVT+P Sbjct: 364 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRCVAAILENYQNEDGSVTVPD 422 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 423 VLVPYMNGMKKITKESGL 440 >gi|52840758|ref|YP_094557.1| seryl-tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|67461694|sp|Q5ZY59|SYS_LEGPH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|52627869|gb|AAU26610.1| seryl tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 426 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 190/428 (44%), Positives = 274/428 (64%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD Q +R+NP+++ L KR + + L+EK + L + ++ RN S IG+ Sbjct: 1 MLDNQLLRENPQYVATQLLKRGFQFDAVTFSQLEEKRKALQVSTQSLQNERNLRSKAIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G + ++ E + L L + E EV ++ + +PN+P E VP+G Sbjct: 61 AKSRG--ENIGPMREEVNKLGAILEQQKTELDEVLKQIEVISLSLPNIPHESVPVGKDEL 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G P+ + H E+GEALG MDF A K++G+RF V+ GHLA L RAL Q Sbjct: 119 DNQEIRKWGDVPAFSFPVKSHDELGEALGQMDFALAAKITGSRFVVMKGHLARLHRALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+D+H +HGY E+ P +V +++ GTGQ+PKF D+F +G +L TSE+ +TN Sbjct: 179 FMLDIHIQQHGYQEIYVPYIVNADSLLGTGQLPKFEADLFKLTGDNGYYLTSTSEIPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I+ ++ LP+R+ +P FRSEAGS G+DT+GM+RQHQF K ELV IT+ EDS+ Sbjct: 239 TVREMILSAEQLPIRYVCHSPCFRSEAGSYGKDTKGMIRQHQFEKVELVWITKPEDSYNA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AE IL+RL+L YRVV+LCTGD+G + KTYDLEVWL QN YREISSCS Sbjct: 299 LEQLTQHAEIILQRLNLPYRVVALCTGDIGAGSAKTYDLEVWLPSQNTYREISSCSNMEA 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM +R+R+P++ ++ HTLNGSG+AVGR L+AI+ENY + G++ IP L+PY+ Sbjct: 359 FQARRMKARFRNPDTNEIQLVHTLNGSGLAVGRTLVAIMENYQDEHGNIHIPDALKPYLG 418 Query: 419 NLAVIKKE 426 + +I + Sbjct: 419 GIDIISVK 426 >gi|85716192|ref|ZP_01047167.1| seryl-tRNA synthetase [Nitrobacter sp. Nb-311A] gi|85697025|gb|EAQ34908.1| seryl-tRNA synthetase [Nitrobacter sp. Nb-311A] Length = 479 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 242/480 (50%), Positives = 305/480 (63%), Gaps = 54/480 (11%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP+ D ALK+R LEPQ+++++S+DE R I+ E +ARRN+ S +IG Sbjct: 1 MHDIKAIRDNPQAFDAALKRRGLEPQADHLISIDELRRARIRVAESFQARRNAASKEIGD 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E + LK +P +E LKK +S IPN+PL+EVP G + Sbjct: 61 AKKMKDEARAAKLMAEVAELKTTMPEMEAAAKAADEELKKALSEIPNLPLDEVPYGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ GKK + H ++G ALG MDF+ A KLSGARF VL LA LERA+GQ Sbjct: 121 SNVQHHIFGKKRDYAFAPKPHDDLGGALGDMDFEAAAKLSGARFVVLKRGLARLERAIGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----------------- 223 F +D+HT EHGYTEV+ PLLVRD+AM+GT Q+PKF +D F T Sbjct: 181 FFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFLEDQFATFAGPIDLSEDRKGMAEVW 240 Query: 224 -----------------------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 D WLIPT+EVSLTNL I++ K LPLRF Sbjct: 241 QRALDEAERYGVEKARTVEFNFEELQYHEDRYWLIPTAEVSLTNLVRESILDEKELPLRF 300 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 T L P FR+EAG+AGRDTRGM+RQHQF K ELVSIT E S EHERMLSCAEE+L+RLD Sbjct: 301 TALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPETSKDEHERMLSCAEEVLRRLD 360 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQ-------NLYREISSCSTCGNFQSRRMNSR 367 LHYRV++LCTGD+GF++ KTYD+EVW+ GQ YREISSCS CG+FQ+RRM++R Sbjct: 361 LHYRVMTLCTGDMGFASQKTYDIEVWMPGQISGQGEGGAYREISSCSVCGDFQARRMDAR 420 Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEH 427 YR + K +F HTLNGSG AVGR LIA++E Y ADGS+ +P VL+PYM L +I +E Sbjct: 421 YRASDGK-PRFVHTLNGSGTAVGRALIAVMETYQQADGSIAVPDVLQPYMGGLKMIGREG 479 >gi|251778552|ref|ZP_04821472.1| serine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082867|gb|EES48757.1| serine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 425 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 173/428 (40%), Positives = 268/428 (62%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR NPE + L R + + I++LDE+ R ++ ++E ++ +RN SA+ Sbjct: 1 MLDLKRIRNNPEEIKKLLSNRGEDFDIAVIDEIITLDEERRKILVEVESLKGKRNQVSAE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G V + N+ L E++ + +E+ ++ ++ IPN+P EVP G Sbjct: 61 IPKLKKAG--EDVTEIMNDMRKLGEEIKNFDTRVNEINERIEYIMLRIPNIPNPEVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N+ I+ G+ + H+++G L ++DF+R K++G+RF+V G A LER+ Sbjct: 119 TDEDNVEIKKWGEPTKFNFEPKAHWDLGTDLNILDFERGGKVAGSRFTVYKGLGARLERS 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT+E+GYTE+ P +V ++M GTGQ+PKF +D F + + IPT+EV + Sbjct: 179 IINYFLDKHTTENGYTEILPPYMVNRDSMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y +E++ LP++ + FR+EAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 TNMYRNEVLSGDILPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKVELVKFCKPEDSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E +++ AE +L+ L L YR+V +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 DELNKLVEDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +YR+ KF HTLNGSGVA+GR + A+LENY DG+V IP ++ + Sbjct: 359 EDFQARRANIKYRETPKDKPKFIHTLNGSGVAIGRTVAAVLENYQKEDGTVEIPEAIKRF 418 Query: 417 MNNLAVIK 424 MN + IK Sbjct: 419 MN-VDFIK 425 >gi|208779037|ref|ZP_03246383.1| seryl-tRNA synthetase [Francisella novicida FTG] gi|208744837|gb|EDZ91135.1| seryl-tRNA synthetase [Francisella novicida FTG] gi|328676733|gb|AEB27603.1| Seryl-tRNA synthetase [Francisella cf. novicida Fx1] Length = 426 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 285/428 (66%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I+ N + + L R + + ++K + L ++ +D++++RN+ S +IGQ Sbjct: 1 MLDAKYIKDNLQQVAEKLATRGYQFDIAEFEAQEQKRKHLQERTQDLQSQRNTISKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G + + + + E+L I+EKE ++ ++ + + +PN+P ++VP+G N Sbjct: 61 KKAKG--EDTSDIFAKVNQINEELKIIEKELKDLQDTINQTLLSMPNLPADDVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ IR G +++H +IGE L ++DF A K++G+RF VL +A L RAL Sbjct: 119 DNVEIRRWGTPREFHPEAPAKDHADIGEILKMIDFKAAAKVTGSRFMVLKNKIAKLHRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+DLHT +HGY E+ P LV ++++YGTGQ+PKFA D+F LIPT+EV + Sbjct: 179 SQFMLDLHTEKHGYEELYVPYLVNNDSLYGTGQLPKFAADLFKLEGDFEYSLIPTAEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI+++++LP +T P FRSEAGS GRDT+GM+RQHQF K ELV IT + Sbjct: 239 TNLVRDEILDTETLPRYYTAHTPCFRSEAGSYGRDTKGMIRQHQFEKVELVHITAADKGE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + S AE++L++L+L YRV+ LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 ESLELLTSHAEKVLQKLNLPYRVMKLCTGDMGFSAKKTYDLEVWLPSQNTYREISSCSWC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+++P+ K + HTLNGSG+AVGR L+AI+ENY DGS+ +P L Y Sbjct: 359 GDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIENYQQEDGSIMVPDALIKY 418 Query: 417 MNNLAVIK 424 M ++VIK Sbjct: 419 MGGISVIK 426 >gi|217076603|ref|YP_002334319.1| seryl-tRNA synthetase [Thermosipho africanus TCF52B] gi|226701415|sp|B7IFW4|SYS_THEAB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|217036456|gb|ACJ74978.1| seryl-tRNA synthetase [Thermosipho africanus TCF52B] Length = 426 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 202/428 (47%), Positives = 290/428 (67%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NPE A+KKR+++ + + IL +D++ R L+ K+ +++A+RN S + Sbjct: 1 MIDVKLLRKNPEIFYDAIKKRNMDTEIIDKILEVDKEWRELVAKVNELKAKRNEFSKLVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + L E+ + E++ +E++E ++ ++ L IPN+P E+VP G Sbjct: 61 KAKVEKDNEKASKLIEESKKIGEEIKKIEEQEKKLEEEMQNLALNIPNIPAEDVPFGKDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +ENI IR G+ + H+++G L +MDF+R KLSG+RF+VL +LA LERAL Sbjct: 121 SENIEIRRWGEPRKFDFEPKAHWDLGPELSMMDFERGAKLSGSRFTVLYSYLARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 QFM+D+HT EHGYTEV P LV+ +AM TG++PKF +D +C D +LIPT+EV L Sbjct: 181 QFMLDVHTKEHGYTEVWVPQLVKRDAMLWTGKLPKFEEDAYCIEKDDMFLIPTAEVPLVA 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L++ EI+ K LP+++T + +R EAGS G+D RGM+RQHQF K ELV IT E SF + Sbjct: 241 LHAQEILSEKDLPIKYTAYSACYRREAGSYGKDVRGMIRQHQFDKVELVWITTPERSFED 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ER+ AE IL+ L+L YRVVSLC+GDLGF + KTYD+EVWL N Y+EISSCS + Sbjct: 301 LERLTQDAERILQLLELPYRVVSLCSGDLGFVSAKTYDIEVWLPSYNSYKEISSCSNTTD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N RYR ++K L + H LNGSG+AVGR L+AI+ENY N DGS+T+P VL PYM Sbjct: 361 FQTRRSNIRYRGSDNK-LHYAHALNGSGLAVGRTLVAIVENYQNEDGSITVPKVLVPYM- 418 Query: 419 NLAVIKKE 426 + I+ + Sbjct: 419 GVEKIEVK 426 >gi|58337885|ref|YP_194470.1| seryl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|67461604|sp|Q5FIN5|SYS_LACAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|58255202|gb|AAV43439.1| seryl-tRNA synthetase [Lactobacillus acidophilus NCFM] Length = 435 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 189/438 (43%), Positives = 267/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++ +D K R + E ++A+RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDTKRRKDLTMSEQLKAKRNDVSKQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N E + +++ L+KE E+ ++ +PN P + PIG Sbjct: 61 EKKR--NKEDASDAIAEMREVGKEIKKLDKEVDELTEKQNYILLRLPNFPADSDPIGPDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+++G LG++D+DRA+K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWEEPTKFDFKPKAHWDLGTDLGILDWDRASKVSGARFVYYIGAGALLERAVF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTE+ P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKD-GYTEIIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T ++P+FRSEAGSAGRDTRG++R H+F K E+V I + Sbjct: 238 AEVPLVNYFRNEIIHENKLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKICK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGRC+ AILENY N DGSVT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRCVAAILENYQNEDGSVTVPD 416 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 417 VLVPYMNGMKKITKESGL 434 >gi|58426333|gb|AAW75370.1| seryl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 466 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 211/450 (46%), Positives = 279/450 (62%), Gaps = 29/450 (6%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ+P L L+ R + + SL+ + + + + +++++ RNS S IG Sbjct: 18 MLDPALLRQHPADLAERLRSTRGFALDTAKLESLESERKHMQVRTQELQSLRNSKSKAIG 77 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V AL E + + ++L V L+K+ + IPN+P +VP+G S Sbjct: 78 QAKAKG--EDVAALMAEVAGVGDELLHSHGRLTVVQHELEKIYAVIPNLPHADVPLGKSE 135 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ G ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 136 ADNVEQSRWGTPRQFDFPVKDHVELGAPNGWLDGETAVKLSGARFTVLRGPIARLHRALA 195 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-------------- 225 QFM+DLH EHGY E + PLLV ++M GTGQ+PKF DD+F + Sbjct: 196 QFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFRIYENEYEGHTDEETGESF 255 Query: 226 ------------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 +LIPTSEV LTN+ EII+++ LPLR T + FR+EAGS GRDTR Sbjct: 256 YTPTGGVDPDPAYYLIPTSEVPLTNIVRDEIIDAERLPLRMTAHSMCFRAEAGSGGRDTR 315 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 GM+RQHQF K ELV+ EDS EH+RM CAE +L++L L YR V LCTGD+GFSA K Sbjct: 316 GMIRQHQFEKVELVTACAPEDSDAEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIK 375 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 TYDLEVWL QN YREISSCS CG+FQ+RRM +R+R+P S L+ HTLNGSG AVGR + Sbjct: 376 TYDLEVWLPSQNTYREISSCSNCGDFQARRMQARWRNPVSGKLELLHTLNGSGTAVGRAM 435 Query: 394 IAILENYLNADGSVTIPTVLRPYMNNLAVI 423 IA++ENY NADGS+ +P VLRPYM + I Sbjct: 436 IAVMENYQNADGSIDVPQVLRPYMGGIERI 465 >gi|326318495|ref|YP_004236167.1| seryl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375331|gb|ADX47600.1| seryl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 439 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 196/443 (44%), Positives = 269/443 (60%), Gaps = 23/443 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ + L+ R Q E SL+ + + L + E++++RRN S Q Sbjct: 1 MLDILLLRKDLDSAIARLETRKKPQAFLQVEAFQSLESERKTLQTRTEELQSRRNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +GQ A G DA+ E LK +L ++ + L L+ +PN+P E VP+G+ Sbjct: 61 VGQLKARG--ENADAVMAEVGGLKAELESSAARLEQIQAELHTLLVAVPNLPHESVPVGS 118 Query: 118 SANENILIRSV----GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + N+ +R +R+H ++GE LG +DFD KLSG+RF+V+ G +A Sbjct: 119 DESGNVEVRRWSPDGQDPKPLGFPARDHVDLGEPLG-LDFDMGVKLSGSRFTVMKGPIAR 177 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------------C 221 L RAL QFM+D+ T EHGYTE P +V +++ GTGQ+PKF D+F Sbjct: 178 LHRALAQFMLDVQTREHGYTECYVPYVVNADSLRGTGQLPKFEGDLFAAKKGGQDGEPVP 237 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 +LIPTSEV LTN +++ LP+R T P FRSEAGS GRDTRGM+RQHQF Sbjct: 238 DNAALYLIPTSEVPLTNFVRDQVVPEAELPIRLTAHTPCFRSEAGSYGRDTRGMIRQHQF 297 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E+V IT + S+ E M AE +L++L L YRV+SLCTGD+GF A KTYDLEVWL Sbjct: 298 DKVEMVQITHPDRSYEALEEMTGHAEAVLRKLGLPYRVMSLCTGDMGFGAAKTYDLEVWL 357 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 QN YREISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LENY Sbjct: 358 PAQNTYREISSVSNCEAFQARRLQARFKNAQGKN-ELVHTLNGSGLAVGRTLVAVLENYQ 416 Query: 402 NADGSVTIPTVLRPYMNNLAVIK 424 ADGSV +P VLRPY+ V++ Sbjct: 417 QADGSVAVPEVLRPYLGGDNVLR 439 >gi|284007596|emb|CBA73182.1| seryl-tRNA synthetase [Arsenophonus nasoniae] Length = 417 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 189/417 (45%), Positives = 255/417 (61%), Gaps = 10/417 (2%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 L +R + + L+++ + L K E ++A RNS S IG A A G VDAL+ Sbjct: 2 AEKLARREFILDVDKLRKLEQERKDLQIKTETLQAERNSRSKTIGAAKARG--EDVDALR 59 Query: 75 NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E + L E+L + + ++ ++ + +PN+P E VP G +N+ I G+ Sbjct: 60 KEVNQLAEELDNTKNKLTQIQDEIRNIALTLPNLPDESVPDGKDETDNVEISRWGEPRQY 119 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 ++H +GE +DF A K++G+RF V+ G +A L RAL QFM+DLHT +HGYTE Sbjct: 120 DFAIKDHVALGELTDGLDFPAAVKITGSRFVVMKGQIARLHRALAQFMLDLHTEQHGYTE 179 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPTSEVSLTNLYSHEIIE 246 P LV +YGTGQ+PKF++D+F T LIPT+EV +TNL EII Sbjct: 180 TYVPYLVNHATLYGTGQLPKFSEDLFHTKPLAEQVSNQQYALIPTAEVPVTNLVRDEIIA 239 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 ++ LP+R T P FRSEAGS GRDTRG++R HQF K ELV I + S E + A Sbjct: 240 AERLPIRLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVEPDKSMAALEELTGHA 299 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 E++L+ L L YR + LCTGD+GF+ACKTYDLEVWL QN YREISSCS +FQ+RRM + Sbjct: 300 EKVLQLLKLPYRKIVLCTGDMGFAACKTYDLEVWLPAQNTYREISSCSNTWDFQARRMQA 359 Query: 367 RYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 R+R K + HTLNGSG+AVGR L+A++ENY ADG + +P VLRPYM L I Sbjct: 360 RFRHKEDKKPQLLHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMKGLTYI 416 >gi|319764030|ref|YP_004127967.1| seryl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|317118591|gb|ADV01080.1| seryl-tRNA synthetase [Alicycliphilus denitrificans BC] Length = 438 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 190/438 (43%), Positives = 268/438 (61%), Gaps = 17/438 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ L+ R E +L+ + + + + E++++RRN S Q Sbjct: 1 MLDILLLRKDLASAVARLETRKKPQAFLNVEAFQALESERKTIQTRTEELQSRRNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + +G +A K + + +KE+L ++ S L+ +++ +PN+P E VP+G+ Sbjct: 61 IGQLMGKGEKDAAEAAKAQVAAIKEELDGSAARLEQIQSELQAMLAAVPNLPHESVPVGS 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+ +R G ++H ++G LG +DFD KLSG+RF+V+ G +A L RA Sbjct: 121 DEAGNVEVRRWGTPRDFGFAVKDHVDLGAPLG-LDFDMGAKLSGSRFTVMKGPIARLHRA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------------CTTDG 225 L QFM+D+ T EHGYTE P +V +++ GTGQ+PKF D+F Sbjct: 180 LAQFMLDVQTGEHGYTECYVPYIVNADSLRGTGQLPKFEGDLFAAKKGGQEGEPVPDDAQ 239 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPTSEV LTNL E++ +LP+R T +P FRSEAGS GRDTRGM+RQHQF K E Sbjct: 240 LYLIPTSEVPLTNLVRGEVVPESALPIRLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVE 299 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I + S+ E M AE +L++L L YRVV LCTGD+GF + KTYDLEVWL Q Sbjct: 300 MVQIVHPDKSYEALEEMTRHAEAVLQKLGLPYRVVCLCTGDMGFGSAKTYDLEVWLPAQG 359 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISS S C FQ+RRM +R+++ ++ + HTLNGSG+AVGR L+A+LEN ADG Sbjct: 360 TYREISSVSNCEAFQARRMQARFKNAQGRN-ELVHTLNGSGLAVGRTLVAVLENCQQADG 418 Query: 406 SVTIPTVLRPYMNNLAVI 423 S+ IP VLRPYM L + Sbjct: 419 SIAIPEVLRPYMGGLERL 436 >gi|308272097|emb|CBX28705.1| Seryl-tRNA synthetase [uncultured Desulfobacterium sp.] Length = 431 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 196/424 (46%), Positives = 278/424 (65%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+++RQN + + ++ KRH E + D K R ++ +IE++R RRN S +I Sbjct: 8 MLEIKFVRQNLDLVQSSILKRHKSADIEGFKNYDSKVRSILLEIEELRHRRNVFSDKIAS 67 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G L E E++ IL E E L K+I IPN+P VP G + Sbjct: 68 MKKKGIDPNT--LVLEMRNESEKIKILNSELLENEEKLNKIIMEIPNMPNASVPEGKDCS 125 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+LIR+VGK P + H+E+GE+L + DF+RA+K++GARF + G A LER++ Sbjct: 126 DNLLIRTVGKIPDFDFEPKNHWELGESLKIFDFERASKITGARFPLYFGAGAKLERSIIN 185 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+++HT+EHGYTEV P +V +++ TGQ+PKF DD+F +++PT+EV +TN+ Sbjct: 186 FMLEIHTTEHGYTEVLPPFIVNSQSLTSTGQLPKFKDDLFKLEGWDYYMVPTAEVPVTNI 245 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + +EI++ LP+ +T P FRSEAGS G+DT+G++RQHQF K ELV + E S+ E Sbjct: 246 HQNEILDESDLPILYTAYTPCFRSEAGSYGKDTKGLIRQHQFNKVELVKFVKPETSYDEL 305 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AE ILKRL+L YRVVSLC GDLGFS+ +TYD+EVW+ Q +YREISSCS NF Sbjct: 306 EKLTQDAESILKRLNLPYRVVSLCAGDLGFSSAQTYDIEVWMPAQGVYREISSCSNFENF 365 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R++ +K + HTLNGSG+AVGR + AI+ENY DGS+ IP LRPYM N Sbjct: 366 QARRGNIRFKRKGAKKTELVHTLNGSGLAVGRTVAAIIENYQQKDGSIIIPDSLRPYMGN 425 Query: 420 LAVI 423 + I Sbjct: 426 MERI 429 >gi|329894895|ref|ZP_08270694.1| Seryl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328922624|gb|EGG29959.1| Seryl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 431 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 189/432 (43%), Positives = 263/432 (60%), Gaps = 10/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + L + E LD + +D++A+R S +IG Sbjct: 1 MLDLKYIRNNLDEVVAKLAVKGFAFDREAFERLDAARKQADISAQDLQAQRKQASKKIGS 60 Query: 61 AIAEGNLSLVDALKNETSTL----KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +A G VD K E + + EQL +E E+ L+ ++ PN+P +VP G Sbjct: 61 LVASGKS--VDEAKAEVAAILELIDEQLGAATQEAKEIQGKLEAMLLATPNIPSTQVPAG 118 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 +S +N + G+ ++H ++GEAL + ++ K++G+RF+VL LA L R Sbjct: 119 SSEEDNQEVYRWGEPRIFDFEPKDHVDLGEALRQLSQEQGAKIAGSRFTVLQSGLARLHR 178 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--CTTDGRWLIPTSEV 234 AL QFM+D HT +HGY EV P +V ++ GTGQ+PKF +D+F T +L PT+EV Sbjct: 179 ALTQFMLDTHTEQHGYQEVYVPYIVNATSLQGTGQLPKFEEDLFKLQTEHAFYLTPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPL--RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 +TNL EI+ ++ L +F P FRSEAG++GRDTRGM+RQHQF K ELV I R Sbjct: 239 PVTNLVRDEILSAEQLEYGLKFACHTPCFRSEAGASGRDTRGMIRQHQFEKVELVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 DS E + AE IL+ L+L YR V LC GDLGFSA KTYDLEVWL GQ+ YREISS Sbjct: 299 NDSEAALEALTGHAEAILQALELPYRKVVLCGGDLGFSAQKTYDLEVWLPGQSAYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G++Q+RR+ +R+R+P + + HTLNGSG+AVGR L+A+LENY DGS+ IP Sbjct: 359 CSNFGDYQARRLQARWRNPETGKPELVHTLNGSGLAVGRTLVALLENYQQEDGSIVIPRA 418 Query: 413 LRPYMNNLAVIK 424 L PYM + VI+ Sbjct: 419 LVPYMRGVEVIQ 430 >gi|330823695|ref|YP_004386998.1| Seryl-tRNA synthetase [Alicycliphilus denitrificans K601] gi|329309067|gb|AEB83482.1| Seryl-tRNA synthetase [Alicycliphilus denitrificans K601] Length = 438 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 192/438 (43%), Positives = 269/438 (61%), Gaps = 17/438 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ L+ R E +L+ + + + + E++++RRN S Q Sbjct: 1 MLDILLLRKDLASAVARLETRKKPQAFLNVEAFQALESERKTIQTRTEELQSRRNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + +G +A K + +T+KE+L ++ S L+ +++ +PN+P E VP+G+ Sbjct: 61 IGQLMGKGEKDAAEAAKAQVATIKEELDGSAARLEQIQSELQAMLAAVPNLPHESVPVGS 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+ +R G ++H ++G LG +DFD KLSG+RF+V+ G +A L RA Sbjct: 121 DEAGNVEVRRWGTPRDFSFAVKDHVDLGAPLG-LDFDMGAKLSGSRFTVMKGPIARLHRA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------------CTTDG 225 L QFM+D+ T EHGYTE P +V +++ GTGQ+PKF D+F Sbjct: 180 LAQFMLDVQTGEHGYTECYVPYIVNADSLRGTGQLPKFEGDLFAAKKGGQEGEPVPDDAQ 239 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPTSEV LTN+ E++ LP+R T +P FRSEAGS GRDTRGM+RQHQF K E Sbjct: 240 LYLIPTSEVPLTNIVRDEVLAESDLPIRLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKIE 299 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I + S+ E M AE IL++L L YRVVSLCTGD+GF + KTYDLEVWL Q Sbjct: 300 MVQIVHPDKSYEALEEMTRHAEAILQKLGLPYRVVSLCTGDMGFGSAKTYDLEVWLPAQG 359 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISS S C FQ+RRM +R+++ ++ + HTLNGSG+AVGR L+A+LEN ADG Sbjct: 360 TYREISSVSNCEAFQARRMQARFKNAQGRN-ELVHTLNGSGLAVGRTLVAVLENCQQADG 418 Query: 406 SVTIPTVLRPYMNNLAVI 423 S+ IP VLRPYM L + Sbjct: 419 SIAIPEVLRPYMGGLERL 436 >gi|188588464|ref|YP_001919477.1| seryl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|238689621|sp|B2UX54|SYS_CLOBA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|188498745|gb|ACD51881.1| seryl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 425 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 173/428 (40%), Positives = 269/428 (62%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++ IR NPE + L R + + I++LDE+ R ++ ++E ++ +RN SA+ Sbjct: 1 MLDLKRIRNNPEEIKKLLSNRGEDFDVAVIDEIVTLDEERRKILVEVESLKGKRNQVSAE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G V + N+ L E++ + +E+ ++ ++ IPN+P EVP G Sbjct: 61 IPKLKKAG--EDVTQIMNDMRKLGEEIKNFDTRVNEINERIEYIMLRIPNIPNPEVPDGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N+ I+ G+ + H+++G L ++DF+R K++G+RF+V G A LER+ Sbjct: 119 TDEDNVEIKKWGEPTKFTFEPKAHWDLGTDLNILDFERGGKVAGSRFTVYKGLGARLERS 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSL 236 + + +D HT+E+GYTE+ P +V ++M GTGQ+PKF +D F + + IPT+EV + Sbjct: 179 IINYFLDKHTTENGYTEILPPYMVNRDSMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y +E++ LP++ + FR+EAGSAGRDTRG++RQHQF K ELV + EDS+ Sbjct: 239 TNMYRNEVLSGDILPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKVELVKFCKPEDSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E ++++ AE +L+ L L YR+V +C GDLGF+A YD+EVW+ N Y EISSCS Sbjct: 299 AELDKLVEDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N +YR+ KF HTLNGSGVA+GR + A+LENY DG+V IP ++ + Sbjct: 359 EDFQARRANIKYRETPKDKPKFIHTLNGSGVAIGRTVAAVLENYQKEDGTVEIPEAIKRF 418 Query: 417 MNNLAVIK 424 MN + IK Sbjct: 419 MN-VDFIK 425 >gi|57339548|gb|AAW49761.1| hypothetical protein FTT1330 [synthetic construct] Length = 461 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 285/428 (66%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I+ N + + L R + + ++K + L ++ +D++++RN+ S +IGQ Sbjct: 27 MLDAKYIKDNLQQVAEKLATRGYQFDIAEFEAQEQKRKHLQERTQDLQSQRNTISKEIGQ 86 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G + + + + E+L I+EKE ++ ++ + + +PN+P ++VP+G N Sbjct: 87 KKAKG--EDTSDIFAKVNQINEELKIIEKELKDLQDTINQTLLSMPNLPADDVPVGKDEN 144 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ IR G +++H +IGE L ++DF A K++G+RF VL +A L RAL Sbjct: 145 DNVEIRRWGTPREFHPEAPAKDHSDIGEILKMIDFKAAAKVTGSRFMVLKNKIAKLHRAL 204 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+DLHT +HGY E+ P LV ++++YGTGQ+PKFA D+F LIPT+EV + Sbjct: 205 SQFMLDLHTEKHGYEELYVPYLVNNDSLYGTGQLPKFAADLFKLEGDFEYSLIPTAEVPI 264 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI+++++LP +T P FRSEAGS GRDT+GM+RQHQF K ELV IT + Sbjct: 265 TNLVRDEILDTETLPRYYTAHTPCFRSEAGSYGRDTKGMIRQHQFEKVELVHITTADKGE 324 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + S AE++L++L+L YRV+ LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 325 ESLELLTSHAEKVLQKLNLPYRVMKLCTGDMGFSAKKTYDLEVWLPSQNTYREISSCSWC 384 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+++P+ K + HTLNGSG+AVGR L+AI+ENY DGS+ +P L Y Sbjct: 385 GDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIENYQQEDGSIMVPDALIKY 444 Query: 417 MNNLAVIK 424 M ++VIK Sbjct: 445 MGGISVIK 452 >gi|118497244|ref|YP_898294.1| seryl-tRNA synthetase [Francisella tularensis subsp. novicida U112] gi|194323546|ref|ZP_03057323.1| seryl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|166222726|sp|A0Q5M5|SYS_FRATN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|118423150|gb|ABK89540.1| seryl-tRNA synthetase [Francisella novicida U112] gi|194322401|gb|EDX19882.1| seryl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] Length = 426 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 284/428 (66%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I+ N + + L R + + ++K R L ++ +D++++RN+ S +IGQ Sbjct: 1 MLDAKYIKDNLQQVAEKLATRGYQFDIAEFEAQEQKRRHLQERTQDLQSQRNTISKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G + + + + E+L I+EKE ++ ++ + + +PN+P ++VP+G N Sbjct: 61 KKAKG--EDTSDIFAKVNQINEELKIIEKELKDLQDTINQTLLSMPNLPADDVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ IR G +++H +IGE L ++DF A K++G+RF VL +A L RAL Sbjct: 119 DNVEIRRWGTPREFHPEAPAKDHADIGEILKMIDFKAAAKVTGSRFMVLKNKIAKLHRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+DLHT +HGY E+ P LV ++++YGTGQ+PKFA D+F LIPT+EV + Sbjct: 179 SQFMLDLHTEKHGYEELYVPYLVNNDSLYGTGQLPKFAADLFKLEGDFEYSLIPTAEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI+++++LP +T P FRSEAGS GRDT+GM+RQHQF K ELV IT + Sbjct: 239 TNLVRDEILDTETLPRYYTAHTPCFRSEAGSYGRDTKGMIRQHQFEKVELVHITAADKGE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + S AE++L++L+L YRV+ LCTGD+ FSA KTYDLEVWL QN YREISSCS C Sbjct: 299 ESLELLTSHAEKVLQKLNLPYRVMKLCTGDMSFSAKKTYDLEVWLPSQNTYREISSCSWC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+++P+ K + HTLNGSG+AVGR L+AI+ENY DGS+ +P L Y Sbjct: 359 GDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIENYQQEDGSIMVPDALIKY 418 Query: 417 MNNLAVIK 424 M ++VIK Sbjct: 419 MGGISVIK 426 >gi|327399276|ref|YP_004340145.1| Seryl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181905|gb|AEA34086.1| Seryl-tRNA synthetase [Hippea maritima DSM 10411] Length = 419 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 192/423 (45%), Positives = 266/423 (62%), Gaps = 5/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+ +R+ PE L LKKR + + ++ LD++ R +++++ ++RNS S +IG+ Sbjct: 1 MLDLNILRKTPEILRENLKKRLAKIDVDELIELDKRVRQKKAELDELLSKRNSLSKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A D L + + +QL +E E ++ +PN+ ++VP G N Sbjct: 61 RKA--KKEAADDLIESVNQILKQLEAVEDEYKKLHKDFMDRWLLVPNILDDDVPSGADEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ P +EHFEI E LG++DF+RA+KLSG+RF+V G A LERAL Sbjct: 119 DNVEIRRWGEPPQFSFKPKEHFEIAEKLGILDFERASKLSGSRFAVYKGDGAKLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT +H Y E+ P +V + M GTGQ PKF ++ + T G++LIPT+EV L NL+ Sbjct: 179 FMLDLHTQKHRYKEIIPPYIVNYDVMVGTGQFPKFIEEAYET-SGQYLIPTAEVPLVNLH 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 E++ LP+++ FR EAGS G+D +G++RQHQF K ELV T+ E+S E Sbjct: 238 REEMLSEDELPIKYVAYTACFRKEAGSYGKDVKGIIRQHQFNKVELVQFTKPEESDKALE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + AEE+L+ L L YRVV LC+GD+GFSA KTYD+EVWL GQN YREISSCS +FQ Sbjct: 298 VLTKDAEEVLRLLGLPYRVVVLCSGDIGFSAAKTYDIEVWLPGQNRYREISSCSNTRDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR + + +K +F HTLNGSGVAVGRCL+AILENY DGSV IP L PY Sbjct: 358 ARRASIK-FKDKNKKKQFVHTLNGSGVAVGRCLVAILENYQQKDGSVKIPEALVPYF-GK 415 Query: 421 AVI 423 I Sbjct: 416 EKI 418 >gi|285018475|ref|YP_003376186.1| seryl-tRNA synthetase (serine--tRNA ligase) (serrs) protein [Xanthomonas albilineans GPE PC73] gi|283473693|emb|CBA16196.1| probable seryl-trna synthetase (serine--trna ligase) (serrs) protein [Xanthomonas albilineans] Length = 437 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 203/427 (47%), Positives = 278/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ P L L+ +R + +L+ + + + +++++ RNS S IG Sbjct: 12 MLDPALLRQQPAVLAEQLRSRRGYVLDVLALDALEADRKRIQVRTQELQSLRNSRSKAIG 71 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V AL E + ++L E+ E+ + L+ L IPN+P +VP G Sbjct: 72 QAKAKG--EDVAALMAEVAGFGDELKASEQRLDEIRAQLETLALEIPNLPQADVPTGKDE 129 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ ++ G + ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 130 VDNVEVQRWGTPRTFDFPVKDHVELGMQHGWLDGESAAKLSGARFTVLRGPIARLHRALA 189 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSL 236 QFM+DLHT H Y E + P++V +++YGTGQ+PKF +DMF T R+LI TSE+SL Sbjct: 190 QFMLDLHTGPHAYQETNVPVIVNADSLYGTGQLPKFEEDMFATALGEQKRYLISTSEISL 249 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI+E++ LPLR T + FRSEAGS GRDTRGM+RQHQF K ELVS+ R E+S Sbjct: 250 TNLVRDEIVEAERLPLRMTAHSLCFRSEAGSGGRDTRGMIRQHQFEKVELVSVCRPEESA 309 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHERM CAE +L+ L L YR + LC+GD+GFSA KTYDLEVWL Q +REISSCS C Sbjct: 310 AEHERMTRCAEVVLETLGLPYRKMLLCSGDMGFSASKTYDLEVWLPSQQTFREISSCSNC 369 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+P + + HTLNGSG AVGR +IA++ENY NADGS+++P L+ Y Sbjct: 370 GDFQARRMQARWRNPATGKPELLHTLNGSGTAVGRAMIAVMENYQNADGSISVPQALQSY 429 Query: 417 MNNLAVI 423 M + I Sbjct: 430 MGGVERI 436 >gi|162148003|ref|YP_001602464.1| seryl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209542619|ref|YP_002274848.1| seryl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|189083571|sp|A9HLG2|SYS_GLUDA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|161786580|emb|CAP56162.1| Seryl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209530296|gb|ACI50233.1| seryl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 424 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 220/426 (51%), Positives = 287/426 (67%), Gaps = 2/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ +R +P D AL +R P + +I SLDE R + ++D +ARR S S ++G Sbjct: 1 MHDLRALRADPAAFDAALARRGEAPAAIHIASLDEDRRAAVTALQDKQARRKSLSKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G S L+ E L+E + LE E+ + ++ + +PN + VP G + Sbjct: 61 LRRTGEDSTA--LEAEAVQLREDIEKLEVLVRELDAEIRDCLVVLPNRLDDGVPEGADES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+++ VG++ REHF +GEALGLMDF+ A KLSGARF VL G LA +ERALGQ Sbjct: 119 ANVVVHQVGERRDFAFPPREHFALGEALGLMDFETAGKLSGARFVVLRGALARMERALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH EHGYTE + P+LV + AM+GT ++PKFAD F T DGRWLIPT+EV LT Sbjct: 179 FMLDLHVQEHGYTETAVPVLVNEAAMFGTDKLPKFADQSFRTEDGRWLIPTAEVPLTASV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I+ + +LP R L+ FRSEAG+AGRDTRGMLRQHQF K E+VSIT DS EHE Sbjct: 239 AGDILPASALPRRMVALSSCFRSEAGAAGRDTRGMLRQHQFQKVEMVSITAPGDSDAEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE++L+RL + YR + LC GD GF A +T+DLE WL GQ+ +REISSCST +FQ Sbjct: 299 RMTRCAEKVLERLGIPYRRMLLCAGDTGFGAARTFDLEAWLPGQDAWREISSCSTTRDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR + +F HTLNGSG+AVGR LIA++ENY NADGS+T+P LRPYMN L Sbjct: 359 ARRMNARYRPADGAGPEFVHTLNGSGLAVGRTLIAVMENYQNADGSITVPQALRPYMNGL 418 Query: 421 AVIKKE 426 A I Sbjct: 419 AAISAR 424 >gi|254369671|ref|ZP_04985681.1| serine-tRNA ligase [Francisella tularensis subsp. holarctica FSC022] gi|157122630|gb|EDO66759.1| serine-tRNA ligase [Francisella tularensis subsp. holarctica FSC022] Length = 426 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 192/428 (44%), Positives = 285/428 (66%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I+ N + + L R + + ++K + L ++ +D++++RN+ S +IGQ Sbjct: 1 MLDAKYIKDNLQQVAEKLATRGYQFDIAEFEAQEQKRKHLQERTQDLQSQRNTISKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G + + + + E+L I+EKE ++ ++ + + +PN+P ++VP+G N Sbjct: 61 KKAKG--EDTSDIFAKVNQINEELKIIEKELKDLQDTINQTLLSMPNLPADDVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ IR G +++H +IGE L ++DF A K++G+RF VL +A L RAL Sbjct: 119 DNVEIRRWGTPREFHPEAPAKDHSDIGEILKMIDFKAAAKVTGSRFMVLKNKIAKLHRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+DLHT +HGY E+ P LV ++++YGTGQ+PKFA ++F LIPT+EV + Sbjct: 179 SQFMLDLHTEKHGYEELYVPYLVNNDSLYGTGQLPKFAANLFKLEGDFEYSLIPTAEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI+++++LP +T P FRSEAGS GRDT+GM+RQHQF K ELV IT + Sbjct: 239 TNLVRDEILDTETLPRYYTAHTPCFRSEAGSYGRDTKGMIRQHQFEKVELVHITTADKGE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + S AE++L++L+L YRV+ LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 ESLELLTSHAEKVLQKLNLPYRVMKLCTGDMGFSAKKTYDLEVWLPSQNTYREISSCSWC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+++P+ K + HTLNGSG+AVGR L+AI+ENY DGS+ +P L Y Sbjct: 359 GDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIENYQQEDGSIMVPDALIKY 418 Query: 417 MNNLAVIK 424 M ++VIK Sbjct: 419 MGGISVIK 426 >gi|196230472|ref|ZP_03129334.1| seryl-tRNA synthetase [Chthoniobacter flavus Ellin428] gi|196225402|gb|EDY19910.1| seryl-tRNA synthetase [Chthoniobacter flavus Ellin428] Length = 423 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 184/426 (43%), Positives = 275/426 (64%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ +R+ P+ + L R + + IL+ D+K R +++ ++A R S +I Sbjct: 1 MLDIRLLREQPDLVKQRLATRDAKLVSAVDEILACDQKRRSAETRLQQLQADRKRISKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G A+G ++ + L ++ LE E ++ ++ + L+ +PN+P ++ P+GT+ Sbjct: 61 GAKKAKG--EDTTEIEAQVRALGTEMTELENETKQLDAAQRTLLLNVPNLPHDQCPVGTT 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N ++R+ G+KP+ + H ++G+ LGL+DF+RATK+SG+ F++ TG A LERAL Sbjct: 119 AEDNPVVRTWGEKPAFAFTPKSHVDLGKDLGLLDFERATKISGSGFALYTGQGARLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLT 237 F++DLHT EHGY EVS P LV +A+ GT Q+PKF + + C D +L+PT+EV +T Sbjct: 179 INFLLDLHTREHGYGEVSPPFLVNSDALVGTTQLPKFEEQQYRCERDDMYLVPTAEVPVT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+ EI+ + LP+R+ P FR EAG+AG TRG++R HQF K ELV IT E SF Sbjct: 239 NLHREEILRQEQLPIRYAAYTPCFRREAGAAGLGTRGLIRIHQFDKVELVKITTPETSFA 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E + + AE++L+ L LHYRV+ LCTGD+GF + KTYD+EVW GQN Y E+SSCS G Sbjct: 299 ELESLTANAEKVLQLLGLHYRVIELCTGDIGFGSAKTYDIEVWAPGQNAYLEVSSCSNFG 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RRMN R+++ K+ +F HTLNGSG A+ R +A+ E Y ADG++ IP LR + Sbjct: 359 DFQARRMNLRFKNAEGKN-QFAHTLNGSGTALPRLFVALTETYQQADGTIAIPEALRGHF 417 Query: 418 NNLAVI 423 I Sbjct: 418 -GAERI 422 >gi|323467135|gb|ADX70822.1| Serine-tRNA ligase [Lactobacillus helveticus H10] Length = 502 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 189/438 (43%), Positives = 265/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++ +D K R + K E ++A+RN S QI Sbjct: 68 MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDAKRRKDLTKSEQLKAKRNDVSKQIA 127 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + +++ L+KE E+ ++ +PN P + PIG Sbjct: 128 EKKR--NKEDASDAIQAMREVGKEIKDLDKEVAELTEKQNYILLRLPNFPADSDPIGPDD 185 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H++IG LG++D+DRA+K+SGARF G A LERA+ Sbjct: 186 SYNEEVRKWNEPTKFDFKPKAHWDIGTDLGILDWDRASKVSGARFVYYIGAGALLERAVF 245 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + YTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 246 NFFLDENTKD-DYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 304 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 305 AEVPLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCK 364 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 365 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 424 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGR + AILENY N DGSVT+P Sbjct: 425 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRAVAAILENYQNEDGSVTVPD 483 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 484 VLVPYMNGMKKITKESGL 501 >gi|328464544|gb|EGF35915.1| seryl-tRNA synthetase [Lactobacillus helveticus MTCC 5463] Length = 435 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 189/438 (43%), Positives = 265/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++ +D K R + K E ++A+RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDAKRRKDLTKSEQLKAKRNDVSKQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + +++ L+KE E+ ++ +PN P + PIG Sbjct: 61 EKKR--NKEDASDAIQAMREVGKEIKDLDKEVAELTEKQNYILLRLPNFPADSDPIGPDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H++IG LG++D+DRA+K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWNEPTKFDFKPKAHWDIGTDLGILDWDRASKVSGARFVYYIGAGALLERAVF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKD-GYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T L+ +FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 238 AEVPLVNYFRNEIIHENKLPINVTALSQAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGR + AILENY N DGSVT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRAVAAILENYQNEDGSVTVPD 416 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 417 VLVPYMNGMKKITKESGL 434 >gi|300811782|ref|ZP_07092255.1| serine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497281|gb|EFK32330.1| serine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|325685463|gb|EGD27561.1| serine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 435 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 186/435 (42%), Positives = 270/435 (62%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D K R + + E+++A RN S +I Sbjct: 1 MLDIKVIRENLDWAKEKLATRGIKPEQLDELVAIDAKRREAMVQCENLKAERNEVSKKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E + + ++ L+KE E+ + ++ +PN P + PIG Sbjct: 61 AAKRE--KADASEAIANMREVGAKIKELDKEVDELQEKQEYILLRLPNFPADSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + + H+++G L ++D+D A+K+S ARF G A LERA+ Sbjct: 119 SYNEEVRRWNEPTKFDYQPKAHWDLGTDLNILDWDAASKVSAARFVYYKGAGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------DGRWLIPT 231 F +D +TSE GYTEV P LV +++M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTSE-GYTEVITPSLVNNDSMQGTGQFPKFTEDVYTIVDNDDPEVARNLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +II+ K+LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 238 AEVPLVNYFRGDIIDGKNLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVVK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS+ E E + AE +L++L L YRVV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 PEDSWKELENLTHNAEHLLQKLGLPYRVVALSTGDASFTSAKTYDLEVWMPAQDTYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K +K THTLNGSG+AVGR + AILENY N DG+VT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-VKLTHTLNGSGLAVGRTVAAILENYQNEDGTVTVPE 416 Query: 412 VLRPYMNNLAVIKKE 426 LRPYM+ + I E Sbjct: 417 ALRPYMHGMTKITPE 431 >gi|329889968|ref|ZP_08268311.1| seryl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] gi|328845269|gb|EGF94833.1| seryl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] Length = 427 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 207/426 (48%), Positives = 282/426 (66%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M DI+ IR NPE R ++ + I +LD R + +D A+RN+ S Sbjct: 1 MHDIRAIRDNPEAFVAGWSSRGVDDADDVVARIRALDVDLRAAQTRGQDALAKRNAASKA 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG A+ + +++ D LK E LK ++ + E + L+ L++ + N+ +VP G Sbjct: 61 IGAAMGKKDMAEADRLKAEVEALKGEIAEAGEAETAKGAELRDLLAGLKNLAAADVPDGE 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N N+ + G +P ++H ++GEALGL+DF+ A K+SG+RF+VL G LA LERA Sbjct: 121 DENGNVEVLKWG-EPRTTGPVKDHADLGEALGLLDFEAAAKMSGSRFAVLKGQLARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 +GQFM+DL T +HGY EV+ P +V+D+AM+GTGQ+PKF +D+F + LIPT+EVSLT Sbjct: 180 IGQFMLDLQTGKHGYQEVAPPYMVKDDAMFGTGQLPKFEEDLFRAGEHL-LIPTAEVSLT 238 Query: 238 NLYSHEIIESKSL--PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 NL +I+ + PLR L P FR+EAGSAGRDTRG++RQHQF K E+VSI R EDS Sbjct: 239 NLVREQILSEDEVAQPLRMAALTPCFRAEAGSAGRDTRGLIRQHQFSKVEMVSICRPEDS 298 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EHERM CAE +L+ L+L YR V LC GD+GFSA KTYDLEVWL QN YREISSCS Sbjct: 299 EAEHERMTGCAEAVLQALELPYRKVLLCKGDMGFSAQKTYDLEVWLPSQNTYREISSCSN 358 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 CG+FQ+RRM++R++ K +F HTLNGSG+AVGR L+A++ENY DG++ +P L+P Sbjct: 359 CGDFQARRMDARFKRAGEKKTEFLHTLNGSGLAVGRTLVAVMENYQQEDGTIAVPAALQP 418 Query: 416 YMNNLA 421 YM L Sbjct: 419 YMGGLK 424 >gi|319899194|ref|YP_004159287.1| Seryl-tRNA synthetase [Bartonella clarridgeiae 73] gi|319403158|emb|CBI76717.1| Seryl-tRNA synthetase [Bartonella clarridgeiae 73] Length = 425 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 240/424 (56%), Positives = 305/424 (71%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR +PE LD L KR +EPQ++ +L D + R+ + K++ + RN++S +I Q Sbjct: 1 MLDIKWIRDHPEELDAVLAKRGIEPQAKNLLEFDLERRLHVSKVQQAQKLRNASSEKIRQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A G+ D +K E +K L EE + L+ +S IPN+PL++VP G N Sbjct: 61 ALAVGDQKTADHVKAEVEKIKVFLSSAVLEEKRLTDRLEAALSAIPNIPLDDVPEGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++IR G P +EHF++G+ L MDF+RA++LSG+RF+VL+G LA LERALGQ Sbjct: 121 DNVVIRYFGTPPMFDFSPKEHFDLGQNLKQMDFERASRLSGSRFTVLSGSLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH EHGY E+S PLLVRDE +YG Q+PKF++D+F TTDGRWLI T+EV L NL Sbjct: 181 FMLDLHVDEHGYQEISVPLLVRDEIVYGAAQLPKFSEDLFRTTDGRWLISTAEVPLVNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ LPLRFT+L P FRSEAG+AGRDTRGMLRQHQF K ELVSIT EE S E E Sbjct: 241 NSEILDVTELPLRFTSLTPCFRSEAGAAGRDTRGMLRQHQFRKVELVSITTEEQSLDELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +LK L L +R + L TGD+GF+A KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 301 RMTECAENVLKHLGLPFRTIVLSTGDMGFAARKTYDIEVWLPGQECYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR K+L F H+LNGSG A+GRCL+AILENY ADGS+ IP VLRPYM + Sbjct: 361 GRRMNARYRLEGEKALHFVHSLNGSGTAIGRCLVAILENYQQADGSIVIPDVLRPYMQGM 420 Query: 421 AVIK 424 I Sbjct: 421 NYIT 424 >gi|313124469|ref|YP_004034728.1| seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281032|gb|ADQ61751.1| Seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 435 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 186/435 (42%), Positives = 270/435 (62%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D K R + + E+++A RN S +I Sbjct: 1 MLDIKVIRENLDWAKEKLATRGIKPEQLDELVAIDAKRREAMVQCENLKAERNEVSKKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E + + ++ L+KE E+ + ++ +PN P + PIG Sbjct: 61 AAKRE--KADASEAIANMREVGAKIKELDKEIDELQEKQEYILLRLPNFPADSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + + H+++G L ++D+D A+K+S ARF G A LERA+ Sbjct: 119 SYNEEVRRWNEPTKFDYQPKAHWDLGTDLNILDWDAASKVSAARFVYYKGAGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------DGRWLIPT 231 F +D +TSE GYTEV P LV +++M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTSE-GYTEVITPSLVNNDSMQGTGQFPKFTEDVYTIVDNDDPEVARNLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +II+ K+LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 238 AEVPLVNYFRGDIIDGKNLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVVK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS+ E E + AE +L++L L YRVV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 PEDSWKELENLTHNAEHLLQKLGLPYRVVALSTGDASFTSAKTYDLEVWMPAQDTYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K +K THTLNGSG+AVGR + AILENY N DG+VT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-VKLTHTLNGSGLAVGRTVAAILENYQNEDGTVTVPE 416 Query: 412 VLRPYMNNLAVIKKE 426 LRPYM+ + I E Sbjct: 417 ALRPYMHGMTKITPE 431 >gi|260102998|ref|ZP_05753235.1| serine-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|260083209|gb|EEW67329.1| serine-tRNA ligase [Lactobacillus helveticus DSM 20075] Length = 457 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 189/438 (43%), Positives = 265/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++ +D K R + K E ++A+RN S QI Sbjct: 23 MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDAKRRKDLTKSEQLKAKRNDVSKQIA 82 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + +++ L+KE E+ ++ +PN P + PIG Sbjct: 83 EKKR--NKEDASDAIQAMREVGKEIKDLDKEVAELTEKQNYILLRLPNFPADSDPIGPDD 140 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H++IG LG++D+DRA+K+SGARF G A LERA+ Sbjct: 141 SYNEEVRKWNEPTKFDFKPKAHWDIGTDLGILDWDRASKVSGARFVYYIGAGALLERAVF 200 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 201 NFFLDENTKD-GYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 259 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T L+ +FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 260 AEVPLVNYFRNEIIHENKLPINVTALSQAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCK 319 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 320 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 379 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGR + AILENY N DGSVT+P Sbjct: 380 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRAVAAILENYQNEDGSVTVPD 438 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 439 VLVPYMNGMKKITKESGL 456 >gi|319407542|emb|CBI81192.1| Seryl-tRNA synthetase [Bartonella sp. 1-1C] Length = 425 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 241/424 (56%), Positives = 308/424 (72%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR +PE LD AL KR LEPQ++ + D + R+ + K++ + RNS S +I Q Sbjct: 1 MLDIKWIRDHPEELDRALAKRGLEPQAKNLQEFDRERRLHVSKVQQAQELRNSASEKIRQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A G+ + +K E +K L EE + L++ +S IPN+PL++ P G N Sbjct: 61 ALAVGDKETANRIKAEVEEIKVFLSSAVLEEKRLTDRLEEALSAIPNIPLDDAPEGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+++R G P+ L +EHF++G+ L MDF+RA++LSG+RF+VL+G LA LERALGQ Sbjct: 121 DNVVMRYFGAPPTFDFLPKEHFDLGQNLKQMDFERASRLSGSRFTVLSGSLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+H EHGY E+S PLLVRDE +YG Q+PKF++D+F T DGRWLI T+EV L NL Sbjct: 181 FMLDMHVDEHGYQEISVPLLVRDEIVYGAAQLPKFSEDLFRTIDGRWLISTAEVPLVNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ LPLRFT+L P FRSEAG+AGRDTRGMLRQHQF K ELVSIT EE S E E Sbjct: 241 NSEILDITELPLRFTSLTPCFRSEAGAAGRDTRGMLRQHQFRKVELVSITTEEQSLDELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +LKRL L +R V L TGD+GF+A KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 301 RMTECAENVLKRLGLPFRTVVLSTGDMGFAARKTYDIEVWLPGQECYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR K+L+F H+LNGSG A+GRCLIAILENY ADGS+ IP VLRPYM ++ Sbjct: 361 GRRMNARYRLEGEKTLRFVHSLNGSGTAIGRCLIAILENYQQADGSIIIPDVLRPYMQDM 420 Query: 421 AVIK 424 I Sbjct: 421 NYIT 424 >gi|297182388|gb|ADI18553.1| seryl-tRNA synthetase [uncultured gamma proteobacterium HF4000_23L14] Length = 429 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 194/432 (44%), Positives = 274/432 (63%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML + +R N + + LK+R+ + L+++ ++ + +D++ RN+ S IGQ Sbjct: 1 MLGSKLLRTNIKFVVEQLKRRNFVFDVDGFNKLEDQRKVAQIQTQDLQNLRNTKSKAIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L +E S L ++L + + ++ + +++ IPN+P VP G S + Sbjct: 61 AKASG--ENMQPLLDEVSDLGKKLDDAKSKLQDIQVKIDEIVMVIPNIPHPSVPEGDSED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI I G+ + ++H E+GE G MD A K+SGARF V+TG LA L+RAL Q Sbjct: 119 DNIEIFKWGEPATLDFDVKDHVELGEMHG-MDLAAAAKISGARFVVITGKLAKLQRALTQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------RWLIPTS 232 FM+D H ++GYTE P LV +++ GTGQ+PKF D+F T +LIPT+ Sbjct: 178 FMLDHHIEKNGYTETYVPYLVNADSLTGTGQLPKFEADLFKTHLHGEEGEAKVLYLIPTA 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TN+ II+ LPL+F P FRSEAGS G+DTRG++RQHQF K ELV I++ Sbjct: 238 EVPVTNIVRESIIKGSELPLKFVAHTPCFRSEAGSYGKDTRGLIRQHQFEKVELVQISKP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 ++S+ E + S AE IL+ L+L YR V LCTGDLGF++ KTYDLEVWL GQ YREISS Sbjct: 298 DNSYEVLEELTSDAEGILQLLELPYRKVILCTGDLGFASAKTYDLEVWLPGQKAYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS FQ+RRM R+++P +K +F HTLNGSG+AVGR L+A++ENY NADGS+ IP V Sbjct: 358 CSCFEGFQARRMQLRWKNPETKETEFLHTLNGSGLAVGRALVAVMENYQNADGSIAIPKV 417 Query: 413 LRPYMNNLAVIK 424 L+ YM + IK Sbjct: 418 LQGYMGGITTIK 429 >gi|325288210|ref|YP_004264391.1| seryl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324963611|gb|ADY54390.1| seryl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 421 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 184/425 (43%), Positives = 264/425 (62%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ +R NPE + AL R+ + + L LDE+ R ++ +E ++ARRN S ++G+ Sbjct: 1 MLDLKLVRSNPERVKEALNHRNSDINLDDFLKLDEERRKILADVEKMKARRNKVSEEVGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G D L E E++ LE + + + + +++ IPN+P VP+G + Sbjct: 61 LKKAG--ENADQLVTEMREEGERIKALESDLNTIDRQMTEILYVIPNIPHSTVPVGKDEH 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI +R G + HFE+GE L ++DF R K++GARF+ G A LER+L Sbjct: 119 DNIELRKWGTPKKFEFEPKAHFELGENLDILDFVRGGKVTGARFTFYKGLGAKLERSLIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 FM+D HT GY+E+ P +V +M+GTGQ+PKF D F + + IPT+EV +TNL Sbjct: 179 FMLDRHT-AKGYSEIFPPFMVHRNSMFGTGQLPKFEQDAFKVENTEYFLIPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+E++ LP+R + FR+EAG+AGRDTRG++RQHQF K ELV + E S+ E Sbjct: 238 YRDEILEAEKLPIRHCAYSACFRAEAGAAGRDTRGIIRQHQFNKVELVKFSLPEKSYEEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + + AE IL+ L+L YRVV+L TGD+GFS+ KTYD+EVWL N YREISSCS +F Sbjct: 298 EELTNSAETILQELELPYRVVALSTGDMGFSSAKTYDIEVWLPSFNTYREISSCSNFEDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R + +F HTLNGSG+A+GR + AILEN DG + +P L YM Sbjct: 358 QARRANIRFRRGPKEKPEFVHTLNGSGLAIGRTVAAILENCQEEDGRIRVPKALWSYM-G 416 Query: 420 LAVIK 424 + I+ Sbjct: 417 VEYIE 421 >gi|119476159|ref|ZP_01616511.1| seryl-tRNA synthetase [marine gamma proteobacterium HTCC2143] gi|119450786|gb|EAW32020.1| seryl-tRNA synthetase [marine gamma proteobacterium HTCC2143] Length = 429 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 275/431 (63%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IRQNP+ + L+K+ + L+LD + + ++A R S +IG+ Sbjct: 1 MLDIKLIRQNPDLVAEQLQKKKFTLNTAEFLTLDAARKQAEADSQSLQAERKQASKKIGE 60 Query: 61 AIAEGNLSLVDALKNETST----LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + +G + V+ K + ++ QL L+++ + +L L+ IPN+P ++VP G Sbjct: 61 LVKQG--TPVEEAKKTVNETLAKIETQLEALKQKAQQASDALHNLMMEIPNIPDDDVPAG 118 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 N N I S GK R+H +IG LG +DFD A+KL+G+RF+V++G +A L R Sbjct: 119 DDENANKEILSWGKPKKIDFEVRDHVDIGTELGGLDFDLASKLTGSRFAVMSGGMARLHR 178 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEV 234 AL QFM++ H +HGY+E+ P +V E++ GTGQ+PKFADD+F +LIPT+EV Sbjct: 179 ALTQFMLNTHIVDHGYSEIHVPFIVNAESLRGTGQLPKFADDLFKLEGEQNYYLIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPL--RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 +TN+ I E+K F P FRSEAGS GRDTRGM+RQHQF K ELV + R Sbjct: 239 PVTNIARDRIFEAKEFADGLHFVCHTPCFRSEAGSYGRDTRGMIRQHQFEKVELVKMVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 + S E E++ AE IL++L+L YR V LC GDLGFSA KTYDLEVWL GQ YREISS Sbjct: 299 DQSSDELEKLTLHAEAILQQLELPYRKVILCGGDLGFSALKTYDLEVWLPGQQKYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS G+FQ+RRM +R+R+P + + HT+NGSG+AVGR L+A+LENY ADG V +P V Sbjct: 359 CSNMGDFQARRMMARWRNPETNKPELLHTINGSGLAVGRTLVAVLENYQTADGRVEVPEV 418 Query: 413 LRPYMNNLAVI 423 L+PYM ++V+ Sbjct: 419 LKPYMGGISVL 429 >gi|91786855|ref|YP_547807.1| seryl-tRNA synthetase [Polaromonas sp. JS666] gi|91696080|gb|ABE42909.1| seryl-tRNA synthetase [Polaromonas sp. JS666] Length = 468 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 195/453 (43%), Positives = 272/453 (60%), Gaps = 32/453 (7%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ L+ R E +L+ + + L + E+++++RN+ S Q Sbjct: 17 MLDINLLRKDLPSAIARLEMRKSPQAFLNVEAFQALEAERKALQIRTEELQSQRNTLSKQ 76 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ ++G A+ + S K +L ++ S L+ L+ +PN+P E VP+GT Sbjct: 77 IGQLKSKG--EDASAIMAQVSASKAELESSAARLDQIQSELQGLLLAVPNLPHESVPLGT 134 Query: 118 SANENILIRSVGK-------KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 N+ +R P+ ++H ++G+ LG +DF+ TKL+G+RF+V+ G Sbjct: 135 DEQGNVEVRKWSPIEGPGGEPPAFAFEVKDHVDVGQPLG-LDFELGTKLTGSRFTVMKGQ 193 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--------- 221 LA L RAL QFM+D+ T EHGYTE P +V +++ GTGQ+PKF D+F Sbjct: 194 LARLHRALAQFMLDVQTLEHGYTECYTPYIVNGDSLRGTGQLPKFEGDLFRVEAGLGLAT 253 Query: 222 ---------TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 T +LIPTSEV LTN EI+ LPL+FT P FRSEAGS GRDT Sbjct: 254 AHDEQIAELTKRSLYLIPTSEVPLTNFVRDEIVPEAQLPLKFTAHTPCFRSEAGSYGRDT 313 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 RGM+RQHQF K E+V I E S+ E M AE IL++L L YRV+ LCTGD+GF A Sbjct: 314 RGMIRQHQFDKVEMVQIVHPEKSYEALEDMTGHAEMILQKLGLPYRVMLLCTGDMGFGAS 373 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 KTYDLEVWL Q+ YREISS S C FQ+RR+ +R+++ K+ +F HTLNGSG+AVGR Sbjct: 374 KTYDLEVWLPAQSTYREISSISNCEAFQARRLQARFKNAQGKN-EFVHTLNGSGLAVGRT 432 Query: 393 LIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 L+A+LENY +ADG+V +P VL+PYM + V+ Sbjct: 433 LVAVLENYQHADGTVEVPLVLQPYMGGMTVLAP 465 >gi|296136104|ref|YP_003643346.1| seryl-tRNA synthetase [Thiomonas intermedia K12] gi|295796226|gb|ADG31016.1| seryl-tRNA synthetase [Thiomonas intermedia K12] Length = 430 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 199/433 (45%), Positives = 273/433 (63%), Gaps = 11/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ H+ L+ R +L+ + + L K+ ED++ARRN S Q Sbjct: 1 MLDITLLRKDLPHVIARLETRQSPQPFLDVARFEALETERKTLQKQTEDLQARRNLLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQA A+G V + E +K L + + L+ L+ +PN+P +VP+G Sbjct: 61 IGQAKAKG--EDVAPIMEEVGHIKTTLEADAARLDALQAELQGLLMAVPNLPAADVPVGA 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N+ +R G + R+H ++G LG +DF+ A ++SG+RF+VL G +A L RA Sbjct: 119 DETQNVELRRWGTPRTFEFPVRDHVDVGADLG-LDFEAAARISGSRFAVLRGPIARLHRA 177 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSE 233 L QFM+D+HT+EHGYTE P +V +A+ GTGQ+PKF +D+F +LIPT+E Sbjct: 178 LAQFMLDVHTTEHGYTEAYVPYIVSAQALRGTGQLPKFEEDLFPVKHGEGESHYLIPTAE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTNL +I+++ LPLRF P FRSEAGS GRD RG++RQHQF K ELV +TR E Sbjct: 238 VPLTNLVRDQIVDAAQLPLRFVAHTPCFRSEAGSGGRDVRGLIRQHQFDKVELVWVTRAE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S T E++ + AE IL+RL L YR + LCTGD+GF + +T+D+EVWL QN YREISSC Sbjct: 298 ESATALEQLTAHAESILQRLQLPYRTIVLCTGDMGFGSARTHDIEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +RYR N K + HTLNGSG+AVGR L+AILENY ADG + IP L Sbjct: 358 SNMEAFQARRMQARYRAENGK-TELAHTLNGSGLAVGRTLVAILENYQRADGGIDIPQAL 416 Query: 414 RPYMNNLAVIKKE 426 +PYM L I+ Sbjct: 417 QPYMGGLTQIEPR 429 >gi|104774578|ref|YP_619558.1| seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514698|ref|YP_813604.1| seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274570|sp|Q048F6|SYS_LACDB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123077195|sp|Q1G8N2|SYS_LACDA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|103423659|emb|CAI98620.1| Seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116094013|gb|ABJ59166.1| seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126383|gb|ADY85713.1| Seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 435 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 186/435 (42%), Positives = 270/435 (62%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D K R + K E+++A RN S +I Sbjct: 1 MLDIKVIRENLDWAKEKLATRGIKPEQLDELVAIDAKRREAMVKCENLKAERNEVSKKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E + + ++ L++E E+ + ++ +PN P + PIG Sbjct: 61 AAKRE--KADASEAIANMREVGVKIKELDQEVDELQEKQEYILLRLPNFPADSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + + H+++G L ++D+D A+K+S ARF G A LERA+ Sbjct: 119 SYNEEVRRWNEPTKFDYQPKAHWDLGTDLNILDWDAASKVSAARFVYYKGAGALLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------DGRWLIPT 231 F +D +TSE GYTEV P LV +++M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTSE-GYTEVITPSLVNNDSMQGTGQFPKFTEDVYTIVDNDDPEVARNLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +II+ K+LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 238 AEVPLVNYFRGDIIDGKNLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVVK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS+ E E + AE +L++L L YRVV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 PEDSWKELENLTHNAEHLLQKLGLPYRVVALSTGDASFTSAKTYDLEVWMPAQDTYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K +K THTLNGSG+AVGR + AILENY N DG+VT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-VKLTHTLNGSGLAVGRTVAAILENYQNEDGTVTVPE 416 Query: 412 VLRPYMNNLAVIKKE 426 LRPYM+ + I E Sbjct: 417 ALRPYMHGMTKITPE 431 >gi|89256780|ref|YP_514142.1| seryl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|115315171|ref|YP_763894.1| seryl-tRNA synthetase [Francisella tularensis subsp. holarctica OSU18] gi|156502942|ref|YP_001429007.1| seryl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010731|ref|ZP_02275662.1| seryl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC200] gi|254368068|ref|ZP_04984088.1| seryl-tRNA synthetase [Francisella tularensis subsp. holarctica 257] gi|122324830|sp|Q0BKX7|SYS_FRATO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|122500428|sp|Q2A2B0|SYS_FRATH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166221439|sp|A7NDJ8|SYS_FRATF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|89144611|emb|CAJ79930.1| Seryl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|115130070|gb|ABI83257.1| serine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|134253878|gb|EBA52972.1| seryl-tRNA synthetase [Francisella tularensis subsp. holarctica 257] gi|156253545|gb|ABU62051.1| seryl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 426 Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 191/428 (44%), Positives = 285/428 (66%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++++ N + + L R + + ++K + L ++ +D++++RN+ S +IGQ Sbjct: 1 MLDAKYVKDNLQQVAEKLATRGYQFDIAEFEAQEQKRKHLQERTQDLQSQRNTISKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G + + + + E+L I+EKE ++ ++ + + +PN+P ++VP+G N Sbjct: 61 KKAKG--EDTSDIFAKVNQINEELKIIEKELKDLQDTINQTLLSMPNLPADDVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ IR G +++H +IGE L ++DF A K++G+RF VL +A L RAL Sbjct: 119 DNVEIRRWGTPREFHPEAPAKDHSDIGEILKMIDFKAAAKVTGSRFMVLKNKIAKLHRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+DLHT +HGY E+ P LV ++++YGTGQ+PKFA ++F LIPT+EV + Sbjct: 179 SQFMLDLHTEKHGYEELYVPYLVNNDSLYGTGQLPKFAANLFKLEGDFEYSLIPTAEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI+++++LP +T P FRSEAGS GRDT+GM+RQHQF K ELV IT + Sbjct: 239 TNLVRDEILDTETLPRYYTAHTPCFRSEAGSYGRDTKGMIRQHQFEKVELVHITTADKGE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + S AE++L++L+L YRV+ LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 ESLELLTSHAEKVLQKLNLPYRVMKLCTGDMGFSAKKTYDLEVWLPSQNTYREISSCSWC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+++P+ K + HTLNGSG+AVGR L+AI+ENY DGS+ +P L Y Sbjct: 359 GDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIENYQQEDGSIMVPDALIKY 418 Query: 417 MNNLAVIK 424 M ++VIK Sbjct: 419 MGGISVIK 426 >gi|254514314|ref|ZP_05126375.1| seryl-tRNA synthetase [gamma proteobacterium NOR5-3] gi|219676557|gb|EED32922.1| seryl-tRNA synthetase [gamma proteobacterium NOR5-3] Length = 433 Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 190/431 (44%), Positives = 264/431 (61%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +R+ PE + AL KR +LD + + + ++A R S S +IGQ Sbjct: 1 MLDIKEVRKQPEVVVEALSKRGFVFDVAAFEALDARRKSADVTSQQLQAERKSASKKIGQ 60 Query: 61 AIAEGN--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + G ++ + +L E E V + L +PN+P EVP GTS Sbjct: 61 LVGGGTSVDEAKASVDETLKEIAARLDQAEHEARAVQAELDTFFEGVPNLPASEVPAGTS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N+ + G S +H ++GE L +D + K++G+RF+V++G LAHL RAL Sbjct: 121 EDDNVAVDHWGDVRSFDFEVSDHVDLGERLDGLDSELGGKITGSRFTVISGPLAHLHRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+DLHT E+G TE++ P +V +++ GTGQ+PKFA+D+F G +LIPT+EV + Sbjct: 181 IQFMLDLHTREYGCTELNVPYIVNSDSLRGTGQLPKFAEDLFRLEGDHGYYLIPTAEVPV 240 Query: 237 TNLYSHEIIESKSLPL---RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 TN+ I E L RF +P FRSEAGS GRDTRGM+RQHQF K ELV + R E Sbjct: 241 TNIARDRIFEDAELGEEGVRFACHSPCFRSEAGSYGRDTRGMIRQHQFEKVELVYLVRPE 300 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E + S AEE+L+RL+L YR + LC GD+GFSA KTYDLEVWL GQ YREISSC Sbjct: 301 QSEAALEHLTSQAEEVLRRLELPYRKMLLCGGDMGFSARKTYDLEVWLPGQGKYREISSC 360 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S+ G++Q+RRM +R+R+P + + HTLNGS +AVGR ++A++ENY ADGS+ IP L Sbjct: 361 SSFGDYQARRMQARWRNPATGKPELLHTLNGSALAVGRTMVAVMENYQQADGSIAIPWAL 420 Query: 414 RPYMNNLAVIK 424 + YM I Sbjct: 421 QAYMGGQTEIP 431 >gi|223936711|ref|ZP_03628621.1| seryl-tRNA synthetase [bacterium Ellin514] gi|223894562|gb|EEF61013.1| seryl-tRNA synthetase [bacterium Ellin514] Length = 433 Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 185/435 (42%), Positives = 276/435 (63%), Gaps = 12/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IR+ P+ + L R+ E + + +L DE+ R L+ ++E ++A+RN S +I Sbjct: 1 MLDIKLIRERPDFVRQRLATRNAGDEARIDEVLKFDEQRRKLLAEVEGLKAQRNRVSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + + L +A K ET L +++ L+K+ ++ +++ +PN+P E V IG + Sbjct: 61 GALMGQKKLDEAEAKKKETRDLGDRIAELDKQAAAAETARDEILLRLPNLPHESVAIGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A EN IR+ G+K S + H E+ E L L+DF R TKLSG+ F + T A LERAL Sbjct: 121 AEENPEIRTWGEKLSYEFKPKSHIELCERLKLVDFARGTKLSGSGFLLYTNWGARLERAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIP 230 QF++DLHT++HGYTEVS P +V + M G GQ PKF D + + +L+P Sbjct: 181 IQFLLDLHTTQHGYTEVSPPYIVNRDCMVGVGQFPKFVDQAYAVREGEDNSTLGSLYLVP 240 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+E + N++ EI+ K LP+ + +P FR+EAG+AG TRGM+R HQF K EL+ + Sbjct: 241 TAEAPVANIHRGEILAEKELPIFYCAYSPCFRAEAGAAGLGTRGMIRVHQFDKVELIKLV 300 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 R E + E E+M+ AE++L+ LDLHYRV++LCTGD+GF++ KTYD+EVW GQ Y E+ Sbjct: 301 RPEVGYEELEKMVGNAEKVLQLLDLHYRVINLCTGDMGFASAKTYDIEVWAPGQGQYLEV 360 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS C +FQ+RRMN R++ S++ +F H LNGSG A+ R +A++E + DGS++IP Sbjct: 361 SSCSNCEDFQARRMNLRFKTETSEN-RFPHILNGSGTALARLFVALVETHQQPDGSISIP 419 Query: 411 TVLRPYMNNLAVIKK 425 L+PY+ IK Sbjct: 420 APLQPYLR-ADSIKP 433 >gi|291165779|gb|EFE27827.1| serine--tRNA ligase [Filifactor alocis ATCC 35896] Length = 423 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 177/426 (41%), Positives = 266/426 (62%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ I+++ + + ++ R + + ++ LD ++K+E ++ + + S QI Sbjct: 1 MLDIKRIKKDLDVIKERMQIRGEKDFSLDEVVELDNHRIEYLQKVEAMKNEQKTKSKQIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q EG + L E L + + L+ E L + + CIPNVP E+V G + Sbjct: 61 QYKKEGKDTTA--LMAELKRLSDAISDLDVRVKETEDILYQKMLCIPNVPNEKVIHGETD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N +R G+ P ++ H++IG L ++DFDR +K++G+RF++ A LER++ Sbjct: 119 EDNKEVRKWGEVPKFDFEAKAHWDIGTDLNILDFDRGSKITGSRFTLYRDLGARLERSII 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 F ++ HT+E+GYTE+ P + + GTGQ+PKF +DMF +L+PT+EV +TN Sbjct: 179 NFFLNTHTAENGYTEMLPPFIANARSFIGTGQLPKFEEDMFRLEGLDYYLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++++ L ++ + P FR+EAGSAGRDTRG++RQHQF K ELV T+ EDS+ E Sbjct: 239 IHRDEIMKAEDLTTKYCSYTPCFRAEAGSAGRDTRGLIRQHQFQKVELVKFTKPEDSYAE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E ++ AE +L++L L YRVV +C+GDLGF+A YDLEVW+ Y EISSCS + Sbjct: 299 LETLVQDAESVLQKLGLPYRVVQICSGDLGFTAAFKYDLEVWMPSYGRYVEISSCSNFED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQSRR N R++ +F HTLNGSGVA+GR + AILENY +DGSV +P VLRPYM Sbjct: 359 FQSRRANIRFKRSKEDKPEFVHTLNGSGVAIGRTVAAILENYQQSDGSVVVPEVLRPYM- 417 Query: 419 NLAVIK 424 + VIK Sbjct: 418 GVDVIK 423 >gi|254284395|ref|ZP_04959363.1| seryl-tRNA synthetase [gamma proteobacterium NOR51-B] gi|219680598|gb|EED36947.1| seryl-tRNA synthetase [gamma proteobacterium NOR51-B] Length = 431 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 200/431 (46%), Positives = 272/431 (63%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R+NPE + L ++ E L+ + R + + ++A R S S QIG Sbjct: 1 MLDTKTVRKNPEAIAAQLLRKGFEFPVTEFKDLESRRREADVRAQSLQAERKSASRQIGT 60 Query: 61 AIAEGN--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 IA G ++ + + ++ + V S+L+ L+ +PNVP E+VP G+ Sbjct: 61 LIAAGKSVDEAKAEVQQQLDRIAAEIDTATAAANAVQSALETLLMSVPNVPHEQVPAGSD 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+NI ++ G + + ++H ++GE LG +D A K++G+RF+V+TG LA L+RAL Sbjct: 121 ENDNIEVKRWGSPRNFDYEVKDHVDLGEGLGFLDTQAAVKITGSRFAVMTGPLAQLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+D HT +HGYTE P LV E++ GTGQ+PKF +D+F G +LIPT+EV + Sbjct: 181 VQFMLDRHTLDHGYTETYVPYLVNRESLAGTGQLPKFEEDLFRIVSDQGYYLIPTAEVPV 240 Query: 237 TNLYSHEIIESKSLPL---RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 TNL I E+ L RF P FRSEAGS GRDTRG++RQHQF K ELV I R + Sbjct: 241 TNLCRDRIFEADELGEEGLRFVAHTPCFRSEAGSYGRDTRGLIRQHQFEKVELVRIVRPQ 300 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E + + AE IL+ L+L YR V LC GDLGFSA TYDLEVWL QN +REISSC Sbjct: 301 QSDAALESLTAHAESILEALELPYRKVILCGGDLGFSAQLTYDLEVWLPAQNTFREISSC 360 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S G+FQ+RRM++R+R+P + + HTLNGSG+AVGR L+AILENY ADGS+TIPT L Sbjct: 361 SNFGDFQARRMSARWRNPETGKPELLHTLNGSGLAVGRTLVAILENYQCADGSITIPTAL 420 Query: 414 RPYMNNLAVIK 424 RPYM VI+ Sbjct: 421 RPYMRGSDVIR 431 >gi|238852918|ref|ZP_04643319.1| serine--tRNA ligase [Lactobacillus gasseri 202-4] gi|238834454|gb|EEQ26690.1| serine--tRNA ligase [Lactobacillus gasseri 202-4] Length = 436 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 186/435 (42%), Positives = 265/435 (60%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D++ R + K E ++ +RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDKLVAIDKERREALTKSEQLKQKRNEVSDQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + +++ L+KE ++ K ++ +PN P + PIG Sbjct: 61 QAKR--NKEDASDAIKAMREVGKEIKDLDKEVEDLTQKQKYILLRLPNFPADSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+EIG L ++D+D A K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWNEPTKFDFEPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKD-GYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +I+++K LP+ T +P+FRSEAGSAGRDTRG++R H+F K E+V I Sbjct: 238 AEVPLVNYFRGKILDAKQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVD 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E+ S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 EDSSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD N K L HTLNGSG+AVGR + AILENY N DG+V +P Sbjct: 358 SCSNCTDFQARRSLIRYRDENGK-LHLAHTLNGSGLAVGRTVAAILENYQNEDGTVNVPE 416 Query: 412 VLRPYMNNLAVIKKE 426 L+PYM+ + VI KE Sbjct: 417 ALQPYMHGMKVITKE 431 >gi|163736768|ref|ZP_02144187.1| seryl-tRNA synthetase [Phaeobacter gallaeciensis BS107] gi|161390638|gb|EDQ14988.1| seryl-tRNA synthetase [Phaeobacter gallaeciensis BS107] Length = 430 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 204/429 (47%), Positives = 279/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R S IL+LDE R I+ E +A +N + IG Sbjct: 1 MHDIRAIRENPAAFDAALARRGDAAMSSDILALDESRRAKIQAAETAQADQNKAAKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + + L+ E + K ++ L+ E E+ + L +++ IPN+P E+VP G + Sbjct: 61 AKAKGEDAEFERLRAEVAGKKAEVAALQTEAKELDAKLTDVLARIPNLPAEDVPAGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G P+ +EHFEI MDF+ A K+SGARF +L G +A + RAL Q Sbjct: 121 DNVEVSKWGALPNFAFDPKEHFEIKGVAAAMDFETAAKISGARFVLLKGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G TEV++P+LVRDEAMYGT ++PKF DD + TT+G WL+PTSEV LT Sbjct: 181 FMVDTHVDENGLTEVNSPVLVRDEAMYGTDKLPKFGDDSYQTTNGWWLVPTSEVPLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + + ++ +LP+R T FRSEAGSAG+DT GMLRQHQF K E+VS+ S E + Sbjct: 241 AGDTLDEAALPIRMTAHTLCFRSEAGSAGKDTSGMLRQHQFEKVEMVSVVHPTQSDDEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE IL++L + YR V LCTGD+GF A +T+D+E W+ GQN YREISS ST G+FQ Sbjct: 301 RMLRCAEGILEKLGIPYRTVVLCTGDMGFGARRTFDIEAWVPGQNTYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ + ++ HTLNGSG+AVGRCLIA+LEN DGSV +P VL PY+ Sbjct: 361 ARRMNARFKPADGGKPEYLHTLNGSGLAVGRCLIAVLENGQQEDGSVKLPEVLAPYLGGR 420 Query: 421 AVIKKEHIL 429 + L Sbjct: 421 LTLTAAGDL 429 >gi|294340309|emb|CAZ88690.1| Seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) [Thiomonas sp. 3As] Length = 430 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 198/433 (45%), Positives = 273/433 (63%), Gaps = 11/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ H+ L+ R +L+ + + L K+ ED++ARRN S Q Sbjct: 1 MLDITLLRKDLPHVIARLETRQCPQPFLDVARFEALEAERKTLQKQTEDLQARRNLLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQA A+G V + E +K L + + L+ L+ +PN+P +VP+G Sbjct: 61 IGQAKAKG--EDVAPIMEEVGHIKTTLEADAARLDALQAELQGLLMAVPNLPAADVPVGA 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N+ +R G + R+H ++G LG +DF+ A ++SG+RF+VL G +A L RA Sbjct: 119 DETQNVELRRWGTPRTFEFPVRDHVDVGADLG-LDFEAAARISGSRFAVLRGPIARLHRA 177 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSE 233 L QFM+D+HT+EHGYTE P +V +A+ GTGQ+PKF +D+F +LIPT+E Sbjct: 178 LAQFMLDVHTTEHGYTEAYVPYIVSAQALRGTGQLPKFEEDLFPVKHGEGESHYLIPTAE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTNL +I+++ LPLRF P FRSEAGS GRD RG++RQHQF K ELV +TR E Sbjct: 238 VPLTNLVRDQIVDAVQLPLRFVAHTPCFRSEAGSGGRDVRGLIRQHQFDKVELVWVTRAE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S T E++ + AE IL+RL L YR + LCTGD+GF + +T+D+EVWL QN YREISSC Sbjct: 298 ESATALEQLTAHAESILQRLQLPYRTIVLCTGDMGFGSARTHDIEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S FQ+RRM +RYR + K + HTLNGSG+AVGR L+AILENY ADG + IP L Sbjct: 358 SNMEAFQARRMQARYRAESGK-TELAHTLNGSGLAVGRTLVAILENYQRADGGIDIPQAL 416 Query: 414 RPYMNNLAVIKKE 426 +PYM L I+ Sbjct: 417 QPYMGGLTQIEPR 429 >gi|259501267|ref|ZP_05744169.1| serine-tRNA ligase [Lactobacillus iners DSM 13335] gi|302191075|ref|ZP_07267329.1| seryl-tRNA synthetase [Lactobacillus iners AB-1] gi|309803335|ref|ZP_07697430.1| serine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|309807340|ref|ZP_07701309.1| serine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|309809016|ref|ZP_07702890.1| serine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|312871091|ref|ZP_07731193.1| serine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|312872053|ref|ZP_07732128.1| serine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|312873500|ref|ZP_07733550.1| serine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|312875339|ref|ZP_07735347.1| serine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|315653217|ref|ZP_07906140.1| serine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325911293|ref|ZP_08173706.1| serine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|325913547|ref|ZP_08175912.1| serine--tRNA ligase [Lactobacillus iners UPII 60-B] gi|329920825|ref|ZP_08277412.1| serine--tRNA ligase [Lactobacillus iners SPIN 1401G] gi|259167394|gb|EEW51889.1| serine-tRNA ligase [Lactobacillus iners DSM 13335] gi|308164499|gb|EFO66751.1| serine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|308166322|gb|EFO68532.1| serine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|308170672|gb|EFO72691.1| serine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|311089173|gb|EFQ47609.1| serine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|311091009|gb|EFQ49403.1| serine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311092346|gb|EFQ50715.1| serine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|311093419|gb|EFQ51761.1| serine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|315489380|gb|EFU79019.1| serine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325476853|gb|EGC80006.1| serine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|325477126|gb|EGC80273.1| serine--tRNA ligase [Lactobacillus iners UPII 60-B] gi|328935605|gb|EGG32072.1| serine--tRNA ligase [Lactobacillus iners SPIN 1401G] Length = 436 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 185/435 (42%), Positives = 265/435 (60%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D K R ++ K E ++ +RN SAQI Sbjct: 1 MLDIKVIRENLDWAKKKLATRGIKPEELDELVAIDVKRREVLTKTETLKNKRNEVSAQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D E + +++ L+ E E+ K ++ +PN P + PIG Sbjct: 61 QAKK--NKENADDAIKEMREVGQEIKALDVEVSELTEKQKYILLRLPNFPDDSDPIGPDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+++G L ++D+D A K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWNEPTKFTFEPKAHWDLGTDLNILDWDAAAKVSGARFVYYKGAGALLERAVF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D + + GYTEV P LV ++M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENV-KAGYTEVIPPYLVNYDSMQGTGQFPKFTEDVYTIVDNDDPDKPRELTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +I++ K LP+ T ++P+FRSEAGSAGRDTRG++R H+F K E+V I Sbjct: 238 AEVPLVNYFRDKILDIKQLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKICD 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E+ S+ E +++ AE +L++L+L Y VV+L TGD F++ KTYDLEVW+ QN YREIS Sbjct: 298 EDSSWQELDKLTKNAEHLLQKLELPYHVVALSTGDASFTSAKTYDLEVWMPAQNQYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD K L HTLNGSG+AVGR + AILENY N DG+V +P Sbjct: 358 SCSNCTDFQARRSLIRYRDEAGK-LHLAHTLNGSGLAVGRTVAAILENYQNEDGTVNVPE 416 Query: 412 VLRPYMNNLAVIKKE 426 L PYM+ + VIK E Sbjct: 417 ALVPYMHGMTVIKPE 431 >gi|42519649|ref|NP_965579.1| seryl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|227889410|ref|ZP_04007215.1| seryl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] gi|67461827|sp|Q74HZ5|SYS_LACJO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|41583938|gb|AAS09545.1| seryl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|227850042|gb|EEJ60128.1| seryl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] Length = 436 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 185/435 (42%), Positives = 263/435 (60%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D++ R + K E ++ +RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDKLVAIDKERREALTKSEQLKQKRNEVSDQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + +++ L+KE ++ ++ +PN P + PIG Sbjct: 61 QAKR--NKEDASDAIKAMREVGKEIKDLDKEVEDLTQKQNYILLRLPNFPADSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+EIG L ++D+D A K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWHEPTKLDFEPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKD-GYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +I++ + LP+ T +P+FRSEAGSAGRDTRG++R H+F K E+V I Sbjct: 238 AEVPLVNYFRGKILDGEQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVD 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EE S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 EESSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD N K L HTLNGSG+AVGR + AILENY N DG+V +P Sbjct: 358 SCSNCTDFQARRSLIRYRDENGK-LHLAHTLNGSGLAVGRTVAAILENYQNEDGTVNVPE 416 Query: 412 VLRPYMNNLAVIKKE 426 L+PYM+ + VI KE Sbjct: 417 ALQPYMHGMKVITKE 431 >gi|116630183|ref|YP_815355.1| seryl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|311110225|ref|ZP_07711622.1| serine--tRNA ligase [Lactobacillus gasseri MV-22] gi|122272880|sp|Q041F5|SYS_LACGA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116095765|gb|ABJ60917.1| seryl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|311065379|gb|EFQ45719.1| serine--tRNA ligase [Lactobacillus gasseri MV-22] Length = 436 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 186/435 (42%), Positives = 265/435 (60%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D++ R + K E ++ +RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDKLVAIDKERREALTKSEQLKQKRNEVSDQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + +++ L+KE ++ K ++ +PN P + PIG Sbjct: 61 QAKR--NKEDASDAIKTMREVGKEIKDLDKEVEDLTQKQKYILLRLPNFPADSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+EIG L ++D+D A K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWNEPTKFDFEPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKD-GYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +I+++K LP+ T +P+FRSEAGSAGRDTRG++R H+F K E+V I Sbjct: 238 AEVPLVNYFRGKILDAKQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVD 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E+ S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 EDSSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD N K L HTLNGSG+AVGR + AILENY N DG+V +P Sbjct: 358 SCSNCTDFQARRSLIRYRDENGK-LHLAHTLNGSGLAVGRTVAAILENYQNEDGTVNVPE 416 Query: 412 VLRPYMNNLAVIKKE 426 L+PYM+ + VI KE Sbjct: 417 ALQPYMHGMKVITKE 431 >gi|88703345|ref|ZP_01101061.1| Seryl-tRNA synthetase [Congregibacter litoralis KT71] gi|88702059|gb|EAQ99162.1| Seryl-tRNA synthetase [Congregibacter litoralis KT71] Length = 433 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 190/432 (43%), Positives = 268/432 (62%), Gaps = 7/432 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR++PE + AL+KR + +LD + + + ++A R S S +IGQ Sbjct: 1 MLDIKEIRKDPEGVVSALEKRGFVFDTAAFEALDARRKTADVTSQQLQAERKSASKKIGQ 60 Query: 61 AIAEGN--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + G ++ + QL E E V S L+ + +PN+P +VP GT Sbjct: 61 LVGSGMSVDEAKASVDATLKEIAAQLDQAESEARVVQSELEAFLHSVPNLPDADVPAGTD 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N ++ G+ P ++H ++GEALG +D + K++G+RF+V++G LA L RAL Sbjct: 121 EEDNAVVAQWGELPGFDFAVKDHVDLGEALGGLDSEMGGKITGSRFTVISGPLAQLHRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+DLHT E+G TE++ P +V +++ GTGQ+PKFA+D+F G +LIPT+EV + Sbjct: 181 IQFMLDLHTREYGCTELNVPYIVNSDSLRGTGQLPKFAEDLFRLEGDQGYYLIPTAEVPV 240 Query: 237 TNLYSHEIIESKSLPL---RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 TN+ I E L RF +P FRSEAGS GRDTRGM+RQHQF K ELV +TR Sbjct: 241 TNIARGRIFEDAELGEAGIRFACHSPCFRSEAGSYGRDTRGMIRQHQFEKVELVYLTRPS 300 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E + AE +L+RL+L YR + LC GD+GFSA KTYDLEVWL GQ+ YREISSC Sbjct: 301 QSEEALEALTGQAETVLQRLELPYRKMLLCGGDMGFSARKTYDLEVWLPGQDKYREISSC 360 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S G++Q+RRM +R+R+P + + HTLNGS +AVGR L+A++ENY DGS+ IP L Sbjct: 361 SLFGDYQARRMQARWRNPETGKPELLHTLNGSALAVGRTLVAVMENYQREDGSIAIPRAL 420 Query: 414 RPYMNNLAVIKK 425 + YM I + Sbjct: 421 QSYMGGQTEIAR 432 >gi|227894178|ref|ZP_04011983.1| seryl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] gi|227864019|gb|EEJ71440.1| seryl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] Length = 435 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 191/438 (43%), Positives = 266/438 (60%), Gaps = 13/438 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI IR+N + L R ++P+ + ++ +D K R + K E ++A+RN S QI Sbjct: 1 MLDITVIRENLDWSKKKLATRGIKPEELDELVEIDTKRRKDLTKSEQLKAKRNDVSKQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N + + +++ L+KE E+ ++ +PN P + P+G Sbjct: 61 EKKR--NKEDASDAISAMREVGKEIKDLDKEVAELTEKQNYILLRLPNFPADSDPVGPDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H++IG LG++D+DRA K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWEEPTKFDFKPKAHWDIGTDLGILDWDRAAKVSGARFVYYIGAGALLERAVF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T E GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKE-GYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +EII LP+ T L+P+FRSEAGSAGRDTRG++R H+F K E+V + + Sbjct: 238 AEVPLVNYFRNEIIHGSKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCK 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 PDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD + K L HTLNGSG+AVGRC+ AILENY N DGSVT+P Sbjct: 358 SCSNCTDFQARRAQIRYRDEDGK-LHLAHTLNGSGLAVGRCVAAILENYQNEDGSVTVPD 416 Query: 412 VLRPYMNNLAVIKKEHIL 429 VL PYMN + I KE L Sbjct: 417 VLVPYMNGMKKITKESSL 434 >gi|225016772|ref|ZP_03705964.1| hypothetical protein CLOSTMETH_00684 [Clostridium methylpentosum DSM 5476] gi|224950440|gb|EEG31649.1| hypothetical protein CLOSTMETH_00684 [Clostridium methylpentosum DSM 5476] Length = 425 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 186/429 (43%), Positives = 266/429 (62%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IR + E + A++ R+ + IL +D + R + + + ++A +N S QI Sbjct: 1 MLDIKLIRTDAEMVKKAMRDRNKNMDETIDEILEIDRERREISTQKDAMKAEQNKVSKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 E V+ + L +++ L + E+ + K L+ IPN+P VPIG S Sbjct: 61 PILKKENGN--VEEVMENMKKLSDEIKELNAKTSELEAKQKDLLLRIPNIPHPSVPIGKS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N IR G + + H+++G+ LG++D D A K++GARF G A LERA+ Sbjct: 119 EDDNQEIRKFGTPTTFDFEPKAHWDLGKDLGILDPDTAAKVTGARFHFYKGAGARLERAV 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLT 237 F +D HT ++GYTEV P +V +M GTGQ+PKF +D F + + IPT+EV +T Sbjct: 179 INFYLDTHT-KNGYTEVFPPFMVNRASMTGTGQLPKFEEDAFRLANMDYFLIPTAEVPVT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y EII+ +P++F + FR+EAGSAGRDTRG++RQHQF K ELV E+S+ Sbjct: 238 NMYRDEIIDGDKIPVKFCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFADPENSYE 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E++ + AE +L+ L+L YRVV L TGDLGFS+ KTYD+EVWL N Y+EISSCS Sbjct: 298 ELEKLTADAERVLQLLELPYRVVCLSTGDLGFSSAKTYDIEVWLPSYNNYKEISSCSNFE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N +++ + + HTLNGSGVA+GR + AILENY N DGSVT+P VL PYM Sbjct: 358 DFQARRANIKFKKSAKEKAQLVHTLNGSGVAIGRTVAAILENYQNEDGSVTVPKVLVPYM 417 Query: 418 NNLAVIKKE 426 VI+ E Sbjct: 418 -GCEVIQAE 425 >gi|329667903|gb|AEB93851.1| seryl-tRNA synthetase [Lactobacillus johnsonii DPC 6026] Length = 436 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 185/435 (42%), Positives = 263/435 (60%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D++ R + K E ++ +RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDKLVAIDKERREALTKSEQLKQKRNEVSDQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + +++ L+KE ++ ++ +PN P + PIG Sbjct: 61 QAKR--NKEDASDAIKAMREVGKEIKDLDKEVEDLTQKQNYILLRLPNFPADSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+EIG L ++D+D A K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWHEPTKLGFEPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKD-GYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +I++ + LP+ T +P+FRSEAGSAGRDTRG++R H+F K E+V I Sbjct: 238 AEVPLVNYFRGKILDGEQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVD 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EE S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 EESSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD N K L HTLNGSG+AVGR + AILENY N DG+V +P Sbjct: 358 SCSNCTDFQARRSLIRYRDENGK-LHLAHTLNGSGLAVGRTVAAILENYQNEDGTVNVPE 416 Query: 412 VLRPYMNNLAVIKKE 426 L+PYM+ + VI KE Sbjct: 417 ALQPYMHGMKVITKE 431 >gi|327393325|dbj|BAK10747.1| seryl-tRNA synthetase SerS [Pantoea ananatis AJ13355] Length = 416 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 192/413 (46%), Positives = 258/413 (62%), Gaps = 10/413 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + E + SL+E+ ++L + E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVEMLRSLEERRKVLQVETENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E ++L E+L + E E+ + ++ +PN+P + VP+G Sbjct: 61 AKARG--EDIEPLRQEVNSLGERLDAAKAELDELQNQIRDFSLALPNLPADVVPLGKDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ I G+ ++H E+GEA +DF A KL+G+RF V+ G +A L RAL Q Sbjct: 119 ENLEISRWGEPRQFDFQVKDHVELGEAAKGLDFAAAVKLTGSRFVVMQGQIARLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FMIDLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMIDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTRPLEEESESSHYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EI+E ++LPL+ T P FRSEAGS GRDTRG++R HQF K E+V I Sbjct: 239 EVPLTNLVRDEIVEEENLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVAP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E ++ AE++L+ L+L YR V LCTGD+GF A KTYDLEVWL QN YREISS Sbjct: 299 ETSMDALEELVGHAEKVLQLLNLPYRKVLLCTGDMGFGATKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 CS G+FQ+RRM +R R K + HTLNGSG+AVGR L+A+LENY DG Sbjct: 359 CSNMGDFQARRMQARTRGKQDKKPRLVHTLNGSGLAVGRTLVAVLENYQQQDG 411 >gi|300867994|ref|ZP_07112633.1| Seryl-tRNA synthetase [Oscillatoria sp. PCC 6506] gi|300334015|emb|CBN57811.1| Seryl-tRNA synthetase [Oscillatoria sp. PCC 6506] Length = 424 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 192/426 (45%), Positives = 264/426 (61%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR+NP+ + +L +R + E IL LD + R L K ++AR N +GQ Sbjct: 1 MLDLKLIRENPQAVQESLNRRGGDYDIEPILQLDRQQRDLEGKRSQLQARSNEIGKLVGQ 60 Query: 61 AIAEG-NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 I + ++ALK E + +K +L LE +E ++ + ++ L+ +PN+P + PIG S Sbjct: 61 KIKSDPKGAEIEALKAEGNQIKAELSELEPQEKDLKAQIEALLLPLPNLPSDSTPIGKSE 120 Query: 120 NENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN+ +R + HFEIGE LG+++F RA K++ RF L G A LERA+ Sbjct: 121 EENVEVRRWGDEYIPQTTDILPHFEIGEKLGIINFIRAVKVAQPRFVTLIGAGAALERAI 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLT 237 Q M+D HT GY EV P LV ++ TGQ+PKFA++ F C D WLIPTSEV + Sbjct: 181 IQLMLDRHT-TAGYVEVIPPFLVNSASLTATGQLPKFAEESFKCDQDDLWLIPTSEVPVV 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY EI+ ++ LP+ + P FR EAGS G+DTRG++R HQF K ELV + S Sbjct: 240 NLYRDEILAAEQLPIYHCSYTPCFRREAGSYGKDTRGLIRLHQFNKVELVKLVHPSTSAA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EH++++ AE +L+ L L YRV+ LCTGD+GFSA KTYDLEVWL YREISSCS G Sbjct: 300 EHQKLVQDAEGVLQALKLPYRVIELCTGDIGFSAAKTYDLEVWLPSAGKYREISSCSNVG 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N R+++ K +F H LNGSG+AVGR + AILENY DG+V IP L+ YM Sbjct: 360 DFQARRANIRFKEAGKKGTQFVHALNGSGLAVGRTMAAILENYQQPDGTVKIPEALQVYM 419 Query: 418 NNLAVI 423 V+ Sbjct: 420 -GREVL 424 >gi|268320022|ref|YP_003293678.1| hypothetical protein FI9785_1556 [Lactobacillus johnsonii FI9785] gi|262398397|emb|CAX67411.1| serS [Lactobacillus johnsonii FI9785] Length = 436 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 185/435 (42%), Positives = 263/435 (60%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D++ R + K E ++ +RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDKLVAIDKERREALTKSEQLKQKRNEVSDQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + +++ L+KE ++ ++ +PN P + PIG Sbjct: 61 QAKR--NKEDTSDAIKAMREVGKEIKDLDKEVEDLTQKQNYILLRLPNFPADSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+EIG L ++D+D A K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWHEPTKFDFEPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKD-GYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +I++ + LP+ T +P+FRSEAGSAGRDTRG++R H+F K E+V I Sbjct: 238 AEVPLVNYFRGKILDGEQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVD 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EE S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 EESSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD N K L HTLNGSG+AVGR + AILENY N DG+V +P Sbjct: 358 SCSNCTDFQARRSLIRYRDENGK-LHLAHTLNGSGLAVGRTVAAILENYQNEDGTVNVPE 416 Query: 412 VLRPYMNNLAVIKKE 426 L+PYM+ + VI KE Sbjct: 417 ALQPYMHGMKVITKE 431 >gi|115524706|ref|YP_781617.1| seryl-tRNA synthetase [Rhodopseudomonas palustris BisA53] gi|122296078|sp|Q07N47|SYS_RHOP5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|115518653|gb|ABJ06637.1| seryl-tRNA synthetase [Rhodopseudomonas palustris BisA53] Length = 476 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 234/474 (49%), Positives = 301/474 (63%), Gaps = 52/474 (10%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP+ D A +R L P ++ ++ LDE RI I E +ARRN+ S +IG+ Sbjct: 1 MHDIKSIRDNPQAFDAAFTRRGLAPIADSLIKLDETRRIAIIASEQAQARRNAASKEIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + +AL E + LK +P L++ ++LKK +S IPN+PL EVP G + Sbjct: 61 AKKAKDNARAEALMAEVTELKTTMPALDEAVKAADAALKKALSEIPNLPLAEVPQGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++ G S + H+E+GEALG MDF+ A K+SGARF VL LA LERA+GQ Sbjct: 121 GNVVRSHFGAPRSYAFTPKPHYELGEALGQMDFEAAAKMSGARFVVLKKGLARLERAIGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------------ 222 F +D+HT EHGYTEV+ PLLV+D+AM+GT Q+PKF++D F Sbjct: 181 FFLDVHTGEHGYTEVNPPLLVKDDAMFGTAQLPKFSNDQFRVDTEEIQIKSAYEEFEKAK 240 Query: 223 ------------------------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 D RWLIPT+EVSLTNL I++ K LP+ Sbjct: 241 NAILNYVEEAGIKSAREEKLEVLGFAYEPNPDRRWLIPTAEVSLTNLVRESILDEKELPM 300 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 R T L P FR+EAG+AGRDTRGM+RQHQF K ELVSIT E S EHERML+CAEE+L+R Sbjct: 301 RLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEQSKDEHERMLACAEEVLRR 360 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCSTCGNFQSRRMNSRYR 369 L LHYRV++LCTGD+GF++ KTYD+EVW+ GQ YREISSCS CG+FQ+RRM++R R Sbjct: 361 LGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREISSCSVCGDFQARRMDARSR 420 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 P+ K +F HTLNGSG AVGR LIA++ENY DGS+ +P L PYM L VI Sbjct: 421 GPDGK-PRFVHTLNGSGTAVGRALIAVIENYQQEDGSIAVPDALLPYMGGLKVI 473 >gi|270291145|ref|ZP_06197368.1| seryl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|270280541|gb|EFA26376.1| seryl-tRNA synthetase [Pediococcus acidilactici 7_4] Length = 426 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 185/429 (43%), Positives = 267/429 (62%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++P+ + +L+ D + R LI K E ++ RN S QI Sbjct: 1 MLDLKMIRNHTDEVKEKLATRGVQPETIDQLLAKDNQRRELIVKSESLKKVRNDVSDQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N + + + +++ L+++ +V + ++ + +PN+P +VP+ + Sbjct: 61 QMKR--NHEDANEPIQKMRKVSQEIKELDEQLEKVAAEVEDQAAHLPNLPHPDVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +R G + H+EIGEALG++DF+RA K++G+RF G A LERA+ Sbjct: 119 EGSVELRKFGTPRKFDFKPKAHWEIGEALGILDFERAAKVAGSRFVYYVGDGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD---MFCTTDGRWLIPTSEVSL 236 F +D + G+TE P +V D +MYGTGQ PKF + + LIPT+EV L Sbjct: 179 NFFLDQNV-AAGFTEEITPYMVNDASMYGTGQFPKFKETHAGYEIKDEQLTLIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y EI++ LP+ T L+P+FRSEAGSAGRDTRG++R HQF K E+V IT+ EDS+ Sbjct: 238 VNFYRDEILDEDQLPINVTALSPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKITKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E++ AE +L++L L Y V++L TGD+ F+A T+DLEVW+ QN YREISSCS Sbjct: 298 QELEKLTRHAETLLQKLGLPYHVITLTTGDMSFTAAMTHDLEVWIPAQNKYREISSCSNT 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD N K L++ HTLNGSG+AVGR + AILENY N DG+VT+P VL PY Sbjct: 358 TDFQARRAQIRYRDENGK-LQYVHTLNGSGLAVGRTVAAILENYQNEDGTVTVPDVLIPY 416 Query: 417 MNNLAVIKK 425 M VI K Sbjct: 417 MQGTKVIGK 425 >gi|56686037|dbj|BAD79259.1| seryl-tRNA synthetase [Synechococcus elongatus PCC 6301] gi|81168141|gb|ABB56481.1| seryl-tRNA synthetase [Synechococcus elongatus PCC 7942] Length = 443 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 192/420 (45%), Positives = 264/420 (62%), Gaps = 5/420 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD++ +R+NPE L +RH + +LSLD++ R ++ ++AR N +GQ Sbjct: 17 LDLRLLRENPEATQARLDRRHSSYDIQPLLSLDQQVRQWEQERTQLQARSNEIGRSVGQK 76 Query: 62 IAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + EG + AL+ E + LK+Q+ LE++E +V S L + +PN+P E VP+G+S Sbjct: 77 MREGADPQSEEIAALREEGNQLKQQIADLEQQERQVRSELDTYLLTLPNLPDETVPLGSS 136 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +EN I G H+EIGE LGL DF+R+T+++ +RF L G A LERAL Sbjct: 137 EDENREIHRWGDDRIREGEFAPHWEIGERLGLFDFERSTRIAQSRFVTLLGAGAALERAL 196 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLT 237 FM+D T GYTEV+ P L+ ++ +GQ+PKF + C D WL PT+EV LT Sbjct: 197 IAFMLDRQT-AAGYTEVAPPYLINSASLTASGQLPKFSEESFRCDRDDLWLTPTAEVPLT 255 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +LY EI+ + LPLR+ P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 256 SLYRDEILSADQLPLRYCAYTPCFRREAGSYGRDTRGLIRLHQFNKVELYQFVHPDHSEA 315 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H+++L+ AE IL+ L+L YR + LCTGDLGFSA KTYD+EVWL YREISSCS CG Sbjct: 316 AHQQLLANAEAILQALELPYRTIELCTGDLGFSAQKTYDIEVWLPSAGRYREISSCSNCG 375 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N R+++ K +F HTLNGSG+AVGR + A+LENY DGSV +P L+PY+ Sbjct: 376 DFQARRANIRFKEAGQKGTRFVHTLNGSGLAVGRTMAAVLENYQQPDGSVRVPEALQPYL 435 >gi|89071126|ref|ZP_01158326.1| seryl-tRNA synthetase [Oceanicola granulosus HTCC2516] gi|89043337|gb|EAR49559.1| seryl-tRNA synthetase [Oceanicola granulosus HTCC2516] Length = 429 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 212/429 (49%), Positives = 282/429 (65%), Gaps = 1/429 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+ P D AL +R L P S IL++DE R I+ E +A N + +IG Sbjct: 1 MHDIRAIRETPGAFDAALSRRGLAPVSSEILAIDEARRAKIQAAETAQAEANRAAKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ E + K + L E + L +L+ +PN+P + +P G + Sbjct: 61 AKARGDDAAFERLRAEVADKKAAIARLNDEAKAEDARLTELLLGLPNLPDDSIPDGDDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + +EH+EI A G +DF+ A LSG+RF VL G +A L RAL Q Sbjct: 121 DNVELRRTGSPRNFSFTPKEHYEIPAARGGLDFETAATLSGSRFVVLKGAMARLHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT EHG TE+ P+LVR+E MYGTGQ+PKF +D + TT+G WLIPTSEV+LTN+ Sbjct: 181 FMLDVHTEEHGLTEMITPVLVREEMMYGTGQLPKFGEDSYQTTNGWWLIPTSEVTLTNVV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +++E+++LP+R + FRSEAGSAGRDT GMLRQHQF K E+VSITR EDS EHE Sbjct: 241 HGKLLEAEALPIRMASHTQCFRSEAGSAGRDTSGMLRQHQFEKVEMVSITRPEDSAAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM AE IL +L L YR V LCTGDLG KT+D+EVWL GQ+ YREISS S G++Q Sbjct: 301 RMTRQAEAILDKLGLPYRTVVLCTGDLGAGMRKTHDIEVWLPGQDRYREISSVSVAGDYQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYRD + K +F HTLNGSG+AVGR LIA+LEN DGSV +P L Y+ Sbjct: 361 ARRMNARYRDEDGK-PRFVHTLNGSGLAVGRTLIAVLENGQQDDGSVELPEALYRYLGGR 419 Query: 421 AVIKKEHIL 429 + + +L Sbjct: 420 TRVTADGVL 428 >gi|225849021|ref|YP_002729185.1| seryl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643211|gb|ACN98261.1| seryl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] Length = 417 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 200/420 (47%), Positives = 274/420 (65%), Gaps = 6/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IR+ P+ + L R + +L +DE+ R + K+I+D+RA RN S Sbjct: 1 MLDIRLIREKPDFVKERLSTRDPSYAQMIDKLLEIDEERRKIKKEIDDLRAERNEKSKLF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 EG + ++ + E++ LE++ + V LI IPN+P +VPIG Sbjct: 61 PIYKKEGKDT--TQIQERVKEIGERIKYLEEKLNTVEEEFNNLILYIPNLPALDVPIGKD 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+N+ +R G+ HFEIGE LG++DF+R KLSG+RF+V+ A LERAL Sbjct: 119 ENDNVEVRRWGESRKFDFEPLPHFEIGERLGILDFERGAKLSGSRFTVMFKEAARLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 FM+D+HT +HGYTEV PLLV+ + + GTGQ+PKF +D++ + +LIPT+EV+LT Sbjct: 179 INFMLDVHTKQHGYTEVWTPLLVKSKTLQGTGQLPKFKEDLYKIEDEDLYLIPTAEVTLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL++ EII LP +T P FR EAGS G+D RG+LRQHQF K ELV I + EDS+ Sbjct: 239 NLHADEIIPEDQLPKYYTAYTPCFRKEAGSHGKDVRGILRQHQFDKVELVKIVKPEDSYN 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E++++ AE+IL+ L+L YRVV LCTGD+GFSA KTYD+EVW+ QN YREISSCS Sbjct: 299 ELEKLVNEAEKILQLLELPYRVVLLCTGDMGFSAAKTYDIEVWIPSQNRYREISSCSNTE 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RY+D K+ F HTLNGSG+AVGR L+AI+ENY DG+ +P VLR Y+ Sbjct: 359 DFQARRAMIRYKDKEGKN-HFVHTLNGSGLAVGRTLLAIIENYQKPDGTFEVPKVLRDYL 417 >gi|319404548|emb|CBI78154.1| Seryl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 425 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 242/424 (57%), Positives = 308/424 (72%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR +PE LD AL KR LEPQ+E + D + R+ + K++ + RNS S +I Q Sbjct: 1 MLDIKWIRDHPEELDRALAKRGLEPQAENLQKFDRERRLHVSKVQQAQELRNSASEKIRQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A G+ + +K E +K L EE + L++ +S IPN+PL++VP G N Sbjct: 61 ALAVGDKETANRVKAEVEEIKVFLSSAVLEEKRLTDRLEEALSAIPNIPLDDVPEGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+++R G + L +EHF++G+ L MDF+RA++LSG+RF+VL+G LA LERALGQ Sbjct: 121 DNVVMRYFGIPQTFDFLPKEHFDLGQNLKQMDFERASRLSGSRFTVLSGSLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+H EHGY E+S PLLVRDE +YG Q+PKF++D+F T DGRWLI T+EV L NL Sbjct: 181 FMLDMHVDEHGYQEISVPLLVRDEIVYGAAQLPKFSEDLFRTIDGRWLISTAEVPLVNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ LPLRFT+L P FRSEAG+AGRDTRGMLRQHQF K ELVSIT EE S E E Sbjct: 241 NSEILDITELPLRFTSLTPCFRSEAGAAGRDTRGMLRQHQFRKVELVSITTEEQSLEELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +LKRL L +R V L TGD+GF+A KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 301 RMTECAENVLKRLGLPFRTVVLSTGDMGFAARKTYDIEVWLPGQECYREISSCSICGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR K+L+F H+LNGSG A+GRCLIAILENY ADGS+ IP VLRPYM ++ Sbjct: 361 GRRMNARYRLEGEKTLRFVHSLNGSGTAIGRCLIAILENYQQADGSIIIPDVLRPYMRDM 420 Query: 421 AVIK 424 I Sbjct: 421 NYIT 424 >gi|254495943|ref|ZP_05108851.1| seryl-tRNA synthetase [Legionella drancourtii LLAP12] gi|254354821|gb|EET13448.1| seryl-tRNA synthetase [Legionella drancourtii LLAP12] Length = 421 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 182/419 (43%), Positives = 268/419 (63%), Gaps = 4/419 (0%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+NP+ + L R + +L+E+ + L + ++ RN+ S IG+A + G Sbjct: 2 RENPQFVASQLLTRGFKFDVAAFSALEERRKALQVATQALQNERNTRSKAIGEAKSRG-- 59 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 +++++ E + L +L + E +V ++ + +PN+P E VP+G N+N +R Sbjct: 60 EDIESMRAEVNRLGAELEQKKLELDDVLHQIEAIALRLPNLPHESVPVGEDENDNQEVRR 119 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 G P+ + H E+GEALG MDF A KL+G+RF V+ LA + RAL QFM+D+HT Sbjct: 120 WGTVPTFDFPVKSHDELGEALGQMDFALAAKLTGSRFVVMKAQLARVHRALIQFMLDIHT 179 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTNLYSHEII 245 +HGY E+ P +V +++ GTGQ+PKF +D+F G +L T+E+ +TN ++ Sbjct: 180 QQHGYQEIYVPYIVNADSLLGTGQLPKFEEDLFKLNGDQGYYLTSTAEIPVTNTVRDMLL 239 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LP+R +P FRSEAGS G+DT+GM+RQHQF K ELV IT+ EDS+ E++ Sbjct: 240 SEEVLPIRHACHSPCFRSEAGSYGKDTKGMIRQHQFEKVELVWITKPEDSYAALEQLTQH 299 Query: 306 AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMN 365 AE IL+RL+L YRVV+LCTGDLG + KTYDLEVWL QN YREISSCS FQ+RRM Sbjct: 300 AEIILQRLELPYRVVALCTGDLGAGSAKTYDLEVWLPSQNTYREISSCSNMEAFQARRMK 359 Query: 366 SRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 +RYR ++ ++ HTLNGSG+AVGR L+A++ENY + +G++ IPT LRPY+ + I+ Sbjct: 360 ARYRQSQTREIELVHTLNGSGLAVGRTLVALMENYQDKEGNIHIPTALRPYLGGMECIR 418 >gi|206890029|ref|YP_002247872.1| seryl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|238065108|sp|B5YGU2|SYS_THEYD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|206741967|gb|ACI21024.1| seryl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 424 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 204/426 (47%), Positives = 282/426 (66%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+++R NPE L AL KR + E LSL+ + +L+++IE RA RNS S +I Sbjct: 1 MLDIKFVRANPEKLKEALDKRGYQIDFEEFLSLERERLLLLREIEQKRAIRNSVSQEIAH 60 Query: 61 AIA-EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + +D L E L E+L +E++ E+ ++ + +PN+P + VP+G Sbjct: 61 LKKLKSDNETIDKLIAEMRKLGEELGSIEQKLREIEDKVQNFLLFLPNIPHDSVPLGKDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+ IR G+ H++IGE LG++DF+RA+K++G+RF+++ G A LERAL Sbjct: 121 NENVEIRRWGEPSHFDFEPMNHWDIGEILGIIDFERASKIAGSRFAIMKGMGARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+DLHT + GY EV P+LV +M GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 181 NFMLDLHT-QKGYIEVLPPILVNKVSMTGTGQLPKFEEDLFKIVDPEFYLIPTAEVPVTN 239 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ LP+ + + P FR EAGS G+D RG++RQHQF K ELV + EDS+ E Sbjct: 240 IHREEILSEDELPIYYVSYTPCFRKEAGSHGKDVRGLIRQHQFNKVELVKFVKPEDSYEE 299 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + AEE+LK L L YRVV+LCTGDLGF++ KTYD+EVWL GQ YREISSCS + Sbjct: 300 LESLTRDAEEVLKMLGLPYRVVALCTGDLGFASAKTYDIEVWLPGQGRYREISSCSNFED 359 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R + K +F HTLNGSG+A+GR L+AILENY DGSV +P VLRPYM Sbjct: 360 FQARRANIRFRRRDKKGTEFVHTLNGSGLAIGRTLVAILENYQQKDGSVIVPEVLRPYM- 418 Query: 419 NLAVIK 424 + VI+ Sbjct: 419 GIDVIR 424 >gi|222111942|ref|YP_002554206.1| seryl-tRNA synthetase [Acidovorax ebreus TPSY] gi|254783024|sp|B9MEG7|SYS_ACIET RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|221731386|gb|ACM34206.1| seryl-tRNA synthetase [Acidovorax ebreus TPSY] Length = 442 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 191/443 (43%), Positives = 269/443 (60%), Gaps = 21/443 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ L+ R E +L+ + + + + E+++++RN S Q Sbjct: 1 MLDILLLRKDLASAVARLETRKKPQAFLNVEAFQALESERKTIQMRTEELQSQRNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G +A K + + +K +L ++ L+ +++ +PN+P E VP+G+ Sbjct: 61 IGMLMGKGEKDAAEAAKAQVAAIKAELDGSATRLDQIQGELQSMLAAVPNLPHESVPVGS 120 Query: 118 SANENILIRSV----GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + N+ +R + S ++H ++GE LG +DFD KLSG+RF+V+ G +A Sbjct: 121 DESANVEVRRWSPDGPQPRSLGFTPKDHVDLGEPLG-LDFDMGVKLSGSRFTVMKGGIAR 179 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------------C 221 L RAL QFM+D+ T EHGYTE P +V +++ GTGQ+PKF D+F Sbjct: 180 LHRALAQFMLDVQTQEHGYTECYVPYVVNADSLKGTGQLPKFEGDLFAAQKGGQDAEPVP 239 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 +LIPTSEV LTN E++ LPL+ T P FRSEAGS GRDTRGM+RQHQF Sbjct: 240 DNAQLYLIPTSEVPLTNFVRDEVLAEAQLPLKLTAHTPCFRSEAGSYGRDTRGMIRQHQF 299 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E+V I + S+ E M AE +L++L L YRV+SLCTGD+GF A KTYDLEVWL Sbjct: 300 DKVEMVQIVHPDKSYEALEEMTRHAEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWL 359 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 QN YREISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LENY Sbjct: 360 PAQNTYREISSVSNCEAFQARRLQARFKNAQGKN-ELVHTLNGSGLAVGRTLVAVLENYQ 418 Query: 402 NADGSVTIPTVLRPYMNNLAVIK 424 N DGSVTIP VLRPYM A + Sbjct: 419 NEDGSVTIPEVLRPYMGGQATLP 441 >gi|264679951|ref|YP_003279860.1| seryl-tRNA synthetase [Comamonas testosteroni CNB-2] gi|299531457|ref|ZP_07044865.1| seryl-tRNA synthetase [Comamonas testosteroni S44] gi|262210466|gb|ACY34564.1| seryl-tRNA synthetase [Comamonas testosteroni CNB-2] gi|298720620|gb|EFI61569.1| seryl-tRNA synthetase [Comamonas testosteroni S44] Length = 438 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 184/439 (41%), Positives = 270/439 (61%), Gaps = 17/439 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDIQ +R++ + + L+ R E +L+ + + + + E+++++RN S Q Sbjct: 1 MLDIQLLRKDLDSVVARLQTRKNPQAFLNVEAFKALESERKSIQTRTEELQSKRNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G +A K E + +K +L ++ + L+ +++ +PN+P E VP+G Sbjct: 61 IGMLMGKGEKDAAEAAKAEVAAMKTELEQSATRLDQIQTELQAMLAAVPNLPHESVPVGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+ +R G + ++H ++G +G +DF+ KLSGARF+V+ G +A L RA Sbjct: 121 DEEGNVEVRRFGTPRNFDFEIKDHVDLGAPIG-LDFEAGVKLSGARFTVMQGQIARLHRA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------------G 225 L QFM+DL T +HGYTE P +V +++ GTGQ+PKF D+F Sbjct: 180 LAQFMLDLQTEQHGYTECYVPYIVNSDSLKGTGQLPKFEGDLFAAQKGGQDAEPLPDTAA 239 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPT+EV LTNL E++ LP++ T +P FRSEAGS GRDTRG++RQHQF K E Sbjct: 240 LYLIPTAEVPLTNLVRDEVLAEDRLPIKLTAHSPCFRSEAGSGGRDTRGLIRQHQFDKVE 299 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I E S+ E M AE +L++L L YRV+SLCTGD+GF + KTYDLEVW+ Q Sbjct: 300 MVQIVHPEKSYEALEEMTGHAEAVLQKLGLPYRVMSLCTGDMGFGSAKTYDLEVWVPAQG 359 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISS S C FQ+RRM +R+++ K+ + HTLNGSG+AVGR L+A+LENY NADG Sbjct: 360 TYREISSVSNCEAFQARRMQARFKNAQGKN-ELVHTLNGSGLAVGRTLVAVLENYQNADG 418 Query: 406 SVTIPTVLRPYMNNLAVIK 424 S+T+P L YM ++K Sbjct: 419 SITVPEALVSYMGGKTLLK 437 >gi|304385427|ref|ZP_07367772.1| serine--tRNA ligase [Pediococcus acidilactici DSM 20284] gi|304328634|gb|EFL95855.1| serine--tRNA ligase [Pediococcus acidilactici DSM 20284] Length = 426 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 184/429 (42%), Positives = 266/429 (62%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + + L R ++P+ + +L+ D + R LI K E ++ RN S QI Sbjct: 1 MLDLKMIRNHTDEVKEKLATRGVQPETIDQLLAKDNQRRELIVKSESLKKVRNDVSDQIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N + + + +++ L+++ +V + ++ + +PN+P +VP+ + Sbjct: 61 QMKR--NHEDANEPIQKMRKVSQEIKELDEQLEKVAAEVEDQAAHLPNLPHPDVPVSLTE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +R G + H+EIGEALG++DF+RA K++G+RF G A LERA+ Sbjct: 119 EGSVELRKFGTPRKFDFKPKAHWEIGEALGILDFERAAKVAGSRFVYYVGDGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD---MFCTTDGRWLIPTSEVSL 236 F +D + G+TE P +V D +M+GTGQ PKF + + LIPT+EV L Sbjct: 179 NFFLDQNV-AAGFTEEITPYMVNDASMFGTGQFPKFKETHAGYEIKDEQLTLIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y EI++ LP+ T L+P+FRSEAGSAGRDTRG++R HQF K E+V IT+ EDS+ Sbjct: 238 VNFYRDEILDEDQLPINVTALSPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKITKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E + AE +L++L L Y V++L TGD+ F+A T+DLEVW+ QN YREISSCS Sbjct: 298 QELENLTRHAETLLQKLGLPYHVITLTTGDMSFTAAMTHDLEVWIPAQNKYREISSCSNT 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD N K L++ HTLNGSG+AVGR + AILENY N DG+VT+P VL PY Sbjct: 358 TDFQARRAQIRYRDENGK-LQYVHTLNGSGLAVGRTVAAILENYQNEDGTVTVPDVLIPY 416 Query: 417 MNNLAVIKK 425 M VI K Sbjct: 417 MQGTKVIGK 425 >gi|21226967|ref|NP_632889.1| seryl-tRNA synthetase [Methanosarcina mazei Go1] gi|30173179|sp|Q8PYJ6|SYS_METMA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|20905281|gb|AAM30561.1| Seryl-tRNA synthetase [Methanosarcina mazei Go1] Length = 422 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 198/426 (46%), Positives = 271/426 (63%), Gaps = 8/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+++++R NP+ + AL R++ + +L D R + + +D++ +RN + +I Sbjct: 1 MLELKFVRNNPDIVGRALISRNMGTELIDSLLEYDAAWRECLIEGDDLKHKRNVVTREIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q E + NE + ++ L+ + + S + +++ IPN+P E P+G Sbjct: 61 QLKKENK--DAASRINEMQGINSRIKELDDKIRDYKSKINEIMLSIPNIPSETTPVGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N ++R VG+ + H+EIGE+L ++DF+RA K+SG F+V G A LERAL Sbjct: 119 NDNPVVRVVGEPREFTFTPKPHWEIGESLDILDFERAAKISGQGFAVYKGMGAKLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 FM+D+HT + GY EV P+L+ ++AM GTGQ+PKF DDM+ TDG +L PT+EV +TNL Sbjct: 179 NFMLDVHTRQ-GYLEVFPPVLINEKAMTGTGQLPKFKDDMYGCTDGFYLAPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E +E +LP+ T FR EAG G+DTRG++R HQF K ELV E S+ E Sbjct: 238 FMDEYME--NLPVFLTAYTACFRREAGKHGQDTRGIIRNHQFNKVELVKFVMPETSYEEL 295 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEEILK L L YRVVSLCTGDLGFSA KTYDLEVW+ Q YREISSCS NF Sbjct: 296 EKLTLDAEEILKLLKLPYRVVSLCTGDLGFSAAKTYDLEVWVPTQEKYREISSCSNFDNF 355 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYR P +F HTLNGSG+AVGR ++AILENY DGSV IP VLRPYM Sbjct: 356 QARRANIRYRTPEG--PQFVHTLNGSGLAVGRTVVAILENYQREDGSVEIPEVLRPYMGG 413 Query: 420 LAVIKK 425 I+K Sbjct: 414 AEEIRK 419 >gi|319943864|ref|ZP_08018145.1| serine--tRNA ligase [Lautropia mirabilis ATCC 51599] gi|319743097|gb|EFV95503.1| serine--tRNA ligase [Lautropia mirabilis ATCC 51599] Length = 453 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 206/456 (45%), Positives = 282/456 (61%), Gaps = 34/456 (7%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DIQ +R++ ++ LK R +L+ + + L + E ++A+RN+ S QIGQ Sbjct: 1 MIDIQTLRRDAAQVESRLKTRGFVFDRAGYEALEARRKALQTRAEALQAQRNALSKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +G AL E + + ++ + E V +SL L++ +PN+P E VP+G S Sbjct: 61 AKGKG--EDASALLAEVNAVTQEQAGIPAELESVQASLDALLASLPNLPHESVPVGRSEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + ++H ++GE LG +D KLSGARF+V+ G +A L RAL Q Sbjct: 119 DNVEVRRWGTPATFDFAVKDHLDVGEPLG-LDAAAGAKLSGARFTVMRGGVARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------------- 224 FM+D+HT+ HGYTE P LV A++GTGQ+PKF +D+F Sbjct: 178 FMLDMHTTRHGYTECYTPYLVNASALFGTGQLPKFEEDLFRVQKLGDQGPAAGTEAGQEA 237 Query: 225 -------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 +LIPTSEVSLTNL + EI+ ++LPLR T P FRSEAGS GRDTRGM+R Sbjct: 238 SGQAVPATMYLIPTSEVSLTNLVAGEILPGEALPLRLTAHTPCFRSEAGSYGRDTRGMIR 297 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 QHQF K E+V +TR EDS+ E M+ AE IL+ L+L YRVV+LCTGD+GFSA KTYDL Sbjct: 298 QHQFDKVEMVQVTRPEDSYATLESMVGHAEAILQALELPYRVVALCTGDMGFSAAKTYDL 357 Query: 338 EVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--------SLKFTHTLNGSGVAV 389 EVWL GQ+ YREISS S FQ+RRM +R+R +++ + HTLNGSG+AV Sbjct: 358 EVWLPGQSAYREISSISNTEAFQARRMQARFRPADAEGKGGKGKAKPEHVHTLNGSGLAV 417 Query: 390 GRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 GR L+A+LEN+ ADGSV IP L+PYM + V+K Sbjct: 418 GRTLVAVLENHQQADGSVRIPKALQPYMGGVEVLKP 453 >gi|241766628|ref|ZP_04764478.1| seryl-tRNA synthetase [Acidovorax delafieldii 2AN] gi|241363097|gb|EER58720.1| seryl-tRNA synthetase [Acidovorax delafieldii 2AN] Length = 452 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 189/444 (42%), Positives = 268/444 (60%), Gaps = 21/444 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ + L+ R E +L+ + + L + E+++A+RN S Q Sbjct: 11 MLDILLLRKDLDTAIARLETRKKPQAFLNVEAFQALESERKTLQTRTEELQAQRNQLSKQ 70 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +G ++ G+ +A K + + K +L ++ + L+ ++ +PN+P E VP+G+ Sbjct: 71 VGMLMSRGDKDGAEAAKAQVAAGKAELEQSAARLEQIQAELQAMLVAVPNLPHESVPVGS 130 Query: 118 SANENILIRSVGK----KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 N+ +R + ++H ++G LG +DFD KLSG+RF+V+ G +A Sbjct: 131 DEAGNVEVRRWSPDGKGPRTFDFEVKDHVDVGTPLG-LDFDMGVKLSGSRFTVMKGQIAR 189 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------------C 221 L RAL QFM+D+ T EHGYTE P V +++ GTGQ+PKF D+F Sbjct: 190 LHRALSQFMLDVQTQEHGYTECYVPYAVNADSLKGTGQLPKFEGDLFAAKKGGQDGEPVP 249 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 +LIPTSEV LTN ++ LP++ T P FRSEAGS GRDTRGM+RQHQF Sbjct: 250 DNAALYLIPTSEVPLTNFVRDVVVAEDQLPIKLTAHTPCFRSEAGSYGRDTRGMIRQHQF 309 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E+V I E S+ E M AE +L++L L YRV+SLCTGD+GF A KTYDLEVWL Sbjct: 310 DKVEMVQIVHPEKSYETLEEMTRHAEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWL 369 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 QN YREISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LENY Sbjct: 370 PAQNTYREISSVSNCEAFQARRLQARFKNAQGKN-ELLHTLNGSGLAVGRTLVAVLENYQ 428 Query: 402 NADGSVTIPTVLRPYMNNLAVIKK 425 ADGSVT+P VLRPY+ +AV+K Sbjct: 429 QADGSVTVPEVLRPYLGGIAVLKP 452 >gi|297569922|ref|YP_003691266.1| seryl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296925837|gb|ADH86647.1| seryl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 423 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 195/420 (46%), Positives = 264/420 (62%), Gaps = 2/420 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML++++IR+N E + R L+ + SLD + R +++++E R RR S S +IG Sbjct: 1 MLELRFIRENLELVKEKTAARGLDRALLDNFSSLDRQRRDILQELESGRNRRKSESQEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 G A T L ++L LE++ E+ L++++ +PN+ + VP+G Sbjct: 61 TLKKAGREEEAAAKMAATKELGQRLKELEEQLAEIDQRLEEIVMGVPNLCDDSVPLGNDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ R G P + H+E+GE G +DF RA KLSGARF++L G A LERAL Sbjct: 121 TDNVEYRRWGSPPEFAFSPKAHWELGEEDGSLDFGRAAKLSGARFALLRGFAARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+DLHT HGYTEV P LV +M TGQ+PKFA+D+F WLIPT+EV +TN Sbjct: 181 SFMLDLHTQRHGYTEVLPPFLVNTASMTATGQLPKFAEDLFKIADSDLWLIPTAEVPVTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ E I + LP+R+ P FRSEAGS GRDT+G++RQHQF K ELV T E S E Sbjct: 241 IHREETIAEQELPIRYCAYTPCFRSEAGSYGRDTKGLIRQHQFDKVELVKFTTPESSEEE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E +LS AE +L+ L+L YRVV+LC+GDLGFSA KTYD+EVW+ QN YREISSCS G+ Sbjct: 301 LEMLLSNAETVLQLLELPYRVVTLCSGDLGFSARKTYDIEVWMPAQNCYREISSCSNFGD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR + HTLNGSG+AVGR L AI EN+ DG++ +P +RPY + Sbjct: 361 FQARRGGIRYRPKDRNKSTLVHTLNGSGLAVGRTLAAIYENHQQPDGTIRLPEAIRPYFD 420 >gi|89902012|ref|YP_524483.1| seryl-tRNA synthetase [Rhodoferax ferrireducens T118] gi|122478532|sp|Q21TF1|SYS_RHOFD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|89346749|gb|ABD70952.1| seryl-tRNA synthetase [Rhodoferax ferrireducens T118] Length = 452 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 192/447 (42%), Positives = 272/447 (60%), Gaps = 23/447 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ + + L+ R + +L+ + + + + E+++ +RN+ S Q Sbjct: 1 MLDITTLRKDLDSVIARLETRKSPQAFLNVDTFRTLEAERKTIQMRTEELQGKRNTLSKQ 60 Query: 58 IGQAIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IGQ A+G + DA+ E + LK +L ++ L+ L+ +PN+P E VP+ Sbjct: 61 IGQLKAKGAAGQAESDAVMAEVAGLKAELETSATRLEQIQLELQALLLGVPNLPHESVPV 120 Query: 116 GTSANENILIRSVGK----KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 G + N+++RS + ++H +IG LG +DF+ KL+GARF+V+ G + Sbjct: 121 GADEHGNVVVRSWSPDGKGPKAFDFEVKDHVDIGTPLG-LDFELGVKLTGARFTVMKGLI 179 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF----------- 220 A L RAL QFM+D+ T EHGYTE P +V ++M GTGQ+PKF D+F Sbjct: 180 ARLHRALAQFMLDVQTQEHGYTECYTPYIVNAQSMRGTGQLPKFEADLFAAKKGGQEAEA 239 Query: 221 -CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 +LIPTSEV LTN ++ LP++ T P FRSEAGSAGRDTRG++RQH Sbjct: 240 APDNSALYLIPTSEVPLTNFVRDVVLAEAELPVKLTAHTPCFRSEAGSAGRDTRGLIRQH 299 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E+V I + S+ E+M AE IL++L L YRV+SLCTGD+GF A KTYDLEV Sbjct: 300 QFDKVEMVQIVHPDKSYETLEQMTGHAEAILQKLGLPYRVMSLCTGDMGFGASKTYDLEV 359 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 WL QN YREISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LEN Sbjct: 360 WLPAQNTYREISSVSNCEAFQARRLQARFKNAQGKN-ELVHTLNGSGLAVGRALVAVLEN 418 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKE 426 Y NADGSVT+P LRPY+ V+ Sbjct: 419 YQNADGSVTVPQALRPYVGGQKVLGAT 445 >gi|322383128|ref|ZP_08056955.1| seryl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152790|gb|EFX45416.1| seryl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 409 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 188/411 (45%), Positives = 264/411 (64%), Gaps = 4/411 (0%) Query: 18 LKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 ++ R E + + LD K R L+++ E +++ RN S ++ AI + N D L E Sbjct: 1 MRNRGSEIAELDRFTDLDRKRRELLQETEQLKSTRNKVSQEV--AIRKKNKENADDLIQE 58 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + +++ L++E + + L L+ IPN+P E VP+G S N+ IR +G+ PS Sbjct: 59 MKIVGDKIKSLDEEIRNLETDLNSLLLSIPNMPHESVPVGMSEEYNVEIRRIGEVPSFNF 118 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 ++ H+++ L ++DF+RA K++G+RF G A LERAL FM+DLH+ EHGY E+ Sbjct: 119 ETKPHWDLAAGLDILDFERAGKVTGSRFVFYKGLGARLERALLNFMMDLHSDEHGYMEIL 178 Query: 197 APLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNLYSHEIIESKSLPLRFT 255 P LV +++ GTGQ+PKFA+D+F + + IPT+EV +TN + EI+ + LP F Sbjct: 179 PPYLVNRDSLTGTGQLPKFAEDVFRIDNSDYFLIPTAEVPVTNYHRDEILTEEQLPGNFV 238 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + FRSEAG+AGRDTRG++RQHQF K ELV + + EDS+ E E + S AE +L+ L L Sbjct: 239 AFSACFRSEAGAAGRDTRGLIRQHQFNKVELVKLVKPEDSYKELEILTSHAERVLQLLHL 298 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS 375 YRV++LCTGDLGFS+ KTYDLEVWL YREISSCS +FQ+RR N R+R Sbjct: 299 PYRVLTLCTGDLGFSSAKTYDLEVWLPSSGTYREISSCSNFEDFQARRSNIRFRRDAKAK 358 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 +F HTLNGSG+A+GR + AILENY DGSV IP VL PYMN + I K+ Sbjct: 359 PEFVHTLNGSGLAIGRTVAAILENYQQEDGSVVIPDVLVPYMNQITHISKK 409 >gi|282852800|ref|ZP_06262141.1| serine--tRNA ligase [Lactobacillus gasseri 224-1] gi|282555908|gb|EFB61529.1| serine--tRNA ligase [Lactobacillus gasseri 224-1] Length = 436 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 185/435 (42%), Positives = 265/435 (60%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D++ R + K E ++ +RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDKLVAIDKERREALTKSEQLKQKRNEVSDQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + +++ L+KE ++ K ++ +PN P + PIG Sbjct: 61 QAKR--NKEDASDAIKAMREVGKEIKDLDKEVEDLTQKQKYILLRLPNFPADSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+EIG L ++D+D A K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWNEPTKFDFEPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKD-GYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +I+++K LP+ T +P+FRSE+GSAGRDTRG++R H+F K E+V I Sbjct: 238 AEVPLVNYFRGKILDAKQLPINVTAFSPAFRSESGSAGRDTRGLIRMHEFRKVEMVKIVD 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E+ S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 EDSSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD N K L HTLNGSG+AVGR + AILENY N DG+V +P Sbjct: 358 SCSNCTDFQARRSLIRYRDENGK-LHLAHTLNGSGLAVGRTVAAILENYQNEDGTVNVPE 416 Query: 412 VLRPYMNNLAVIKKE 426 L+PYM+ + VI KE Sbjct: 417 ALQPYMHGMKVITKE 431 >gi|17231468|ref|NP_488016.1| seryl-tRNA synthetase [Nostoc sp. PCC 7120] gi|30173193|sp|Q8YQ59|SYS_ANASP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|17133110|dbj|BAB75675.1| seryl-tRNA synthetase [Nostoc sp. PCC 7120] Length = 426 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 197/428 (46%), Positives = 270/428 (63%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+NP+ + L R+ + IL LD++ R L I+AR N +GQ Sbjct: 1 MLDIKQIRENPQLIQERLNSRNGTYDIQPILQLDKQQRELEATRSQIQARSNEIGKIVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + AL++E + +K QL LE E E+ + +++LI +PN+P + PIG Sbjct: 61 KIKSGINPQDPEIQALRDEGNAIKAQLSELEPREKELKAEIEQLILALPNLPSDSTPIGK 120 Query: 118 SANENILIRSVGKKP-SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 EN+ +R G + H+EIGE LG+++F+RA K++ +RF L G A LER Sbjct: 121 GEEENVEVRLWGDEYLPQNPNIIPHWEIGEKLGILNFERAVKVAQSRFVNLIGAGAALER 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVS 235 AL FM+ + T GY EVS PLLV +++ GTGQ+PKFA++ F C D WLIPT+EV Sbjct: 181 ALINFMLKMQT-AAGYIEVSPPLLVNTDSLTGTGQLPKFAEESFKCADDELWLIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLY EI+ +++LP+ P FR EAGS GRD RG++R HQF K ELV + S Sbjct: 240 VTNLYRGEILAAENLPIYHCAYTPCFRREAGSYGRDMRGLIRLHQFNKVELVKVVHPSTS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 F E E+++ AE IL+ L L YRV++LCTGDLGF A KTYDLEVWL YREISSCS Sbjct: 300 FDELEKLVGNAEAILQALKLPYRVINLCTGDLGFGATKTYDLEVWLPSSGKYREISSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +FQ+RR + R+++ K +F HTLNGSG+AVGR + AILENY DG++ IP VL+P Sbjct: 360 CFDFQARRADIRFKEAGKKGTQFVHTLNGSGLAVGRTMAAILENYQQPDGTILIPEVLQP 419 Query: 416 YMNNLAVI 423 ++ V+ Sbjct: 420 FL-GREVL 426 >gi|39935910|ref|NP_948186.1| seryl-tRNA synthetase [Rhodopseudomonas palustris CGA009] gi|192291558|ref|YP_001992163.1| seryl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] gi|67461786|sp|Q6N5X5|SYS_RHOPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|229890230|sp|B3Q6H9|SYS_RHOPT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|39649764|emb|CAE28286.1| seryl-tRNA synthetase [Rhodopseudomonas palustris CGA009] gi|192285307|gb|ACF01688.1| seryl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] Length = 434 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 235/434 (54%), Positives = 303/434 (69%), Gaps = 10/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP+ D A +R L P + ++ LDE R ++ E +ARRN+ S +IG Sbjct: 1 MHDIKAIRDNPQAFDAAFTRRGLAPIAGSLMKLDEVRRAAVQAAEQAQARRNAASKEIGD 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + +AL E + LK +P L+ E +LKK +S IPN+PL EVP G + Sbjct: 61 AKKAKDNARAEALMAEVTELKTTMPALDAAVKEADEALKKALSEIPNLPLPEVPEGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ G+KPS + H+++GEALG+MDF+ A KLSGARF+VL LA LERA+GQ Sbjct: 121 GNVEHHRFGEKPSYSFTPKPHYDLGEALGMMDFEAAAKLSGARFTVLKKGLARLERAIGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------TDGRWLIPTSEV 234 F +D+HT +HGYTEV+ PLLV+D+AM+GT Q+PKF +D F +G WLIPT+EV Sbjct: 181 FFLDVHTGDHGYTEVNPPLLVKDDAMFGTAQLPKFREDQFAAGAIGSGGEGYWLIPTAEV 240 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 SLTNL I++ K LP+R T L P FR+EAG+AGRDTRGM+RQHQF K ELVSIT E Sbjct: 241 SLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEQ 300 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREIS 351 S EHERMLSCAEE+L+RL LHYRV++LCTGD+GF++ KTYD+EVW+ GQ YREIS Sbjct: 301 SKDEHERMLSCAEEVLRRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREIS 360 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS CG+FQ+RRM++R R + K +F HTLNGSG AVGR LIA++ENY DGS+ +P Sbjct: 361 SCSVCGDFQARRMDARSRGSDGK-PRFVHTLNGSGTAVGRALIAVIENYQQEDGSIAVPD 419 Query: 412 VLRPYMNNLAVIKK 425 VL+PYM L VI K Sbjct: 420 VLQPYMGGLKVIAK 433 >gi|319406057|emb|CBI79687.1| Seryl-tRNA synthetase [Bartonella sp. AR 15-3] Length = 425 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 238/424 (56%), Positives = 306/424 (72%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR +PE LD AL KR LEPQ++ +L D + R+ + K++ + RNS S +I Q Sbjct: 1 MLDIKWIRDHPEELDTALAKRGLEPQAKNLLKFDLERRLYVSKVQQAQELRNSASEKIRQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ G+ + +K E +K L EE + L++ +S IPN+PL++VP G Sbjct: 61 ALTAGDQKTANRVKAEVEEIKVFLSAAVLEEKRLTDRLEEALSAIPNIPLDDVPEGKDER 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI++R G P+ L ++HF++G+ L MDF+RA++LSG+RF+VL+ LA LERALGQ Sbjct: 121 DNIVVRYFGTPPTFDFLPKQHFDLGQNLKQMDFERASRLSGSRFTVLSSSLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+H EHGY E+S P LVR E +YG Q+PKF++D+F TTDGRWLI T+EV L NL Sbjct: 181 FMLDMHVDEHGYQEISVPFLVRSEIVYGAAQLPKFSEDLFQTTDGRWLISTAEVPLVNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ LPLRFT+L P FRSEAG+AGRDTRGMLRQHQF K ELVSIT EE S E E Sbjct: 241 NSEILDITELPLRFTSLTPCFRSEAGAAGRDTRGMLRQHQFRKVELVSITTEEQSLDELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +LKRL L +R V L TGD+GF+A KTYD+EVWL GQ YREISSCS CG+FQ Sbjct: 301 RMTECAENVLKRLGLPFRTVVLSTGDMGFTARKTYDIEVWLPGQECYREISSCSVCGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 RRMN+RYR + K+L F H+LNGSG A+GRCLIAILENY ADGS+ IP VL+PYM + Sbjct: 361 GRRMNARYRLEDKKTLHFVHSLNGSGTAIGRCLIAILENYQQADGSIIIPDVLQPYMQGM 420 Query: 421 AVIK 424 + I Sbjct: 421 SCIT 424 >gi|28199204|ref|NP_779518.1| seryl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182681934|ref|YP_001830094.1| seryl-tRNA synthetase [Xylella fastidiosa M23] gi|32130164|sp|Q87BX8|SYS_XYLFT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238691047|sp|B2I631|SYS_XYLF2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|28057310|gb|AAO29167.1| seryl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182632044|gb|ACB92820.1| seryl-tRNA synthetase [Xylella fastidiosa M23] gi|307578190|gb|ADN62159.1| seryl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 426 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 205/427 (48%), Positives = 279/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ L L R + +L+ + + + +++++ RNS S IG Sbjct: 1 MLDPTLLRQQLAKLAECLLTVRGFTLDVAALEALESERKRIQVHTQELQSLRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA ++G V AL E + + L E E+ + L+K+ IPN+P ++VP+G Sbjct: 61 QARSKG--EDVSALMAEVAAFSDDLKASEIALEEIRTELEKVALDIPNLPQQDVPLGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ G + ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 RDNVEQARWGVPRTFDFAIKDHVELGACHGWLDAESAAKLSGARFTVLRGPIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 Q M+DLH S+HGY EV+ P++V ++++GTGQ+PKF +DMF T R+LI TSE+SL Sbjct: 179 QCMLDLHVSQHGYEEVNVPIIVNADSLHGTGQLPKFEEDMFSTQLGEHRRYLISTSEISL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL +EIIE+ LPLR + FRSEAGS GRDTRGM+RQHQF K ELVS+ + +DS Sbjct: 239 TNLVRNEIIEADRLPLRMVAHSLCFRSEAGSGGRDTRGMIRQHQFEKVELVSVCKPQDSE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH RM CAE +L+ L L YR + LCTGD+GF+A KTYDLEVWL Q +YREISSCS C Sbjct: 299 GEHHRMTRCAETVLEMLGLPYRKILLCTGDMGFAATKTYDLEVWLPSQGMYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+ + + HTLNGSGVAVGR +IA++ENY NADGS+T+P VLRPY Sbjct: 359 GDFQARRMQARWRNSVTGKPELVHTLNGSGVAVGRAMIAVMENYQNADGSITVPEVLRPY 418 Query: 417 MNNLAVI 423 M+ L+ I Sbjct: 419 MDGLSRI 425 >gi|329119631|ref|ZP_08248312.1| serine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] gi|327464228|gb|EGF10532.1| serine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] Length = 430 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 197/430 (45%), Positives = 274/430 (63%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R + L R + + +L+ K ++L K E+++A RN S +IG Sbjct: 1 MLDIQLLRNDTAAAAARLAARGFDFDTVRFDALENKRKLLQVKTEELQAERNGESKKIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G +A + +K L + V + L ++ IPN+P E VP+G Sbjct: 61 LKGQGKHEEAEAAMAAVARIKADLEQAAADLEAVQAELDAWLAAIPNLPHESVPVGRDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R VG ++H ++GE LG +DF+ A LSGARFS++ G +A L RAL Q Sbjct: 121 QNVEVRRVGTPRVFDFPVKDHVDLGEKLG-LDFETAAALSGARFSLMKGKIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT HGYTE P +V D ++GTGQ+PKF +D+F T ++LIPT+E Sbjct: 180 FMLDTHTQRHGYTECYTPYIVSDTTLFGTGQLPKFGEDLFHVTRGGDEAKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN I+ + LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I R E Sbjct: 240 VTLTNTVRERILPASELPLKLTAHSPCFRSEAGSHGKDTRGLIRQHQFDKVEMVQIVRPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE+IL+ L+L YRV++LCTGD+GF A KTYDLEVW+ QN YREISSC Sbjct: 300 ASYAALEEMVGHAEKILQLLELPYRVITLCTGDMGFGAAKTYDLEVWVPAQNTYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN+ NADGS+TIP L Sbjct: 360 SNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLENHQNADGSITIPAAL 418 Query: 414 RPYMNNLAVI 423 RPY+ + V+ Sbjct: 419 RPYLGGIEVL 428 >gi|297587952|ref|ZP_06946596.1| serine--tRNA ligase [Finegoldia magna ATCC 53516] gi|297574641|gb|EFH93361.1| serine--tRNA ligase [Finegoldia magna ATCC 53516] Length = 421 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 195/424 (45%), Positives = 273/424 (64%), Gaps = 5/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR NPE + ALKKR E + +L DEK R +I+K+E ++A +N S Q+ Q Sbjct: 1 MLDIKRIRNNPEEIVEALKKRRGEYPIQKLLDTDEKRREVIQKVESMKAEQNKLSKQVPQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L L + + ++ + ++ +++ + IPN P ++VP+G Sbjct: 61 MKKNG--EDTTELFKNLKKLSDDIKSMDDDLKDIDEEIREYLMEIPNTPNKDVPVGLDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + H+++G L ++DF+RATK+S +RFSV G A LERAL Sbjct: 119 ENLEMRKWGEPRKFDFDIKAHWDLGVDLDILDFERATKISKSRFSVFKGKGARLERALMN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSLTNL 239 FM+DLHT + GYTE++ P+L+ AM GTGQIPKF +DM +C D +L PT+EV +TNL Sbjct: 179 FMVDLHTDKQGYTEMNTPVLMSPSAMMGTGQIPKFKEDMFYCEKDDMYLAPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+E SLP+ +T FR EAGSAGRDTRG++R HQF K E+V S+ E Sbjct: 239 LAGEILEQGSLPIYYTAFTQCFRREAGSAGRDTRGLIRNHQFEKVEMVKFVEPSTSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AEEIL+ L++ YRVV LC+GDLGFS+ TYD+EVW+ N Y EISSCS +F Sbjct: 299 EKLTNNAEEILQLLEIPYRVVRLCSGDLGFSSAMTYDVEVWMPSYNRYVEISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYRD N+K ++ HTLNGSG+A+GRC A++ENY ADGS+ IP VL+ Y Sbjct: 359 QARRANIRYRDENNK-PQYVHTLNGSGLAIGRCFAAVIENYQQADGSIKIPEVLQKYT-G 416 Query: 420 LAVI 423 +I Sbjct: 417 FDII 420 >gi|161378160|ref|NP_299565.2| seryl-tRNA synthetase [Xylella fastidiosa 9a5c] gi|30173217|sp|Q9PB58|SYS_XYLFA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase Length = 426 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 203/427 (47%), Positives = 279/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ L L R + +L+ + + + +++++ RNS S IG Sbjct: 1 MLDPTLLRQQLAKLAECLSTVRGFTLDVAALEALESERKRIQVHTQELQSLRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA ++G V +L E + + L E E+ + L+K+ IPN+P ++VP+G Sbjct: 61 QARSKG--EDVSSLMAEVAAFSDDLKASEIALEEIRTELEKVALGIPNLPQQDVPLGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ G + ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 RDNVEQARWGVPRTFDFSIKDHVELGACHGWLDAESAAKLSGARFTVLRGPIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 Q M+DLH +HGY EV+ P++V +++YGTGQ+PKF +DMF T R+LI TSE+SL Sbjct: 179 QCMLDLHVRQHGYEEVNVPIIVNADSLYGTGQLPKFEEDMFSTQLGEHRRYLISTSEISL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL +EIIE+ LPLR + FRSEAGS GRDTRGM+RQHQF K ELVS+ + ++S Sbjct: 239 TNLVRNEIIEADRLPLRMAAHSLCFRSEAGSGGRDTRGMIRQHQFEKVELVSVCKPQESE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L+ L L YR + LCTGD+GF+A KTYDLEVWL Q +YREISSCS C Sbjct: 299 GEHQRMTRCAETVLEMLGLPYRKILLCTGDMGFAATKTYDLEVWLPSQGMYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+ + + HTLNGSGVAVGR +IA++ENY NADGS+T+P VLRPY Sbjct: 359 GDFQARRMQARWRNSVTGKPELVHTLNGSGVAVGRAMIAVMENYQNADGSITVPEVLRPY 418 Query: 417 MNNLAVI 423 M+ L+ I Sbjct: 419 MDGLSRI 425 >gi|294676987|ref|YP_003577602.1| seryl-tRNA synthetase [Rhodobacter capsulatus SB 1003] gi|294475807|gb|ADE85195.1| seryl-tRNA synthetase [Rhodobacter capsulatus SB 1003] Length = 429 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 211/423 (49%), Positives = 274/423 (64%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP D L +R L P S +L+LDE+ R I E +A +N+ + ++G Sbjct: 1 MHDIRAIRDNPAQFDADLARRSLPPLSAEVLALDERRRAAILAAETAQAAQNAAAKEVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + + L+ + K ++ ++ E + + L+ + IPN PL EVP G Sbjct: 61 AKAKGDEAEFERLRALVAEKKSEVAAMQAEAGRLDAELRDRLMLIPNAPLPEVPEGADEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ ++ G PS + EH+++ MDF+ A KLSGARF VL +A + RAL Q Sbjct: 121 GNVEVKRWGTIPSFAFKALEHYQLSAVAKAMDFETAAKLSGARFVVLRAGVARVHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLH HG TE P+LVR EAM GTGQ+PKFA+D + TTDG W+IPT+EV+LTN Sbjct: 181 FMLDLHVDSHGLTEAITPVLVRAEAMLGTGQLPKFAEDSYATTDGWWMIPTAEVTLTNFI 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++EI + +LP R T FRSEAGSAG+DT GMLRQHQF K E+V+I R ED+ EHE Sbjct: 241 ANEIWDEAALPCRMTAHTNCFRSEAGSAGKDTAGMLRQHQFEKVEMVTICRPEDALAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +L+ L L YR + LCTGD+GF + KTYDLEVWL GQN +REISS STCG FQ Sbjct: 301 RMTGCAEAVLEALGLPYRRIVLCTGDMGFGSQKTYDLEVWLPGQNCFREISSVSTCGQFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 SRRMN RY+ F TLNGSG+AVGRCLIA+LEN DGSVT+P VL PY+ Sbjct: 361 SRRMNGRYKPAAGGKPDFVATLNGSGLAVGRCLIAVLENGQQEDGSVTLPAVLHPYLGGK 420 Query: 421 AVI 423 + Sbjct: 421 TRL 423 >gi|300363019|ref|ZP_07059189.1| serine--tRNA ligase [Lactobacillus gasseri JV-V03] gi|300353069|gb|EFJ68947.1| serine--tRNA ligase [Lactobacillus gasseri JV-V03] Length = 436 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 186/435 (42%), Positives = 265/435 (60%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D++ R + K E ++ +RN S QI Sbjct: 1 MLDIKVIRENLDWSKKKLATRGIKPEELDKLVAIDKERREALTKSEQLKQKRNEVSDQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N + +++ L+KE ++ K ++ +PN P + PIG Sbjct: 61 QAKR--NKEDASDAIKAMREVGKEIRDLDKEVEDLTQKQKYILLRLPNFPADSDPIGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N +R + + H+EIG L ++D+D A K+SGARF G A LERA+ Sbjct: 119 SYNEEVRKWNEPTKFDFEPKPHWEIGTELNILDWDTAAKVSGARFVYYKGAGALLERAVS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPT 231 F +D +T + GYTEV P LV D +M GTGQ PKF +D++ LIPT Sbjct: 179 NFFLDENTKD-GYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKPRDLTLIPT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV L N + +I+++K LP+ T +P+FRSEAGSAGRDTRG++R H+F K E+V I Sbjct: 238 AEVPLVNYFRGKILDAKQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVD 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E+ S+ E E++ AE +L++L L Y VV+L TGD F++ KTYDLEVW+ Q+ YREIS Sbjct: 298 EDSSWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C +FQ+RR RYRD N K L HTLNGSG+AVGR + AILENY N DG+V +P Sbjct: 358 SCSNCTDFQARRSLIRYRDENGK-LHLAHTLNGSGLAVGRTVAAILENYQNEDGTVDVPE 416 Query: 412 VLRPYMNNLAVIKKE 426 L+PYM+ + VI KE Sbjct: 417 ALQPYMHGMKVITKE 431 >gi|71899891|ref|ZP_00682039.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1] gi|71730331|gb|EAO32414.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1] Length = 426 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 204/427 (47%), Positives = 279/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ L L R + +L+ + + + +++++ RNS S IG Sbjct: 1 MLDPTLLRQQLAKLAECLLTVRGFTLDVAALEALESERKRIQVHTQELQSLRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA ++G V AL E + + L E E+ + L+K+ IPN+P ++VP+G Sbjct: 61 QARSKG--EDVSALMAEVAAFSDDLKASEIALEEIRTELEKVALDIPNLPQQDVPLGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ G + ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 RDNVEQARWGVPRTFDFAIKDHVELGACHGWLDAESAAKLSGARFTVLRGPIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 Q M+DLH S+HGY EV+ P++V ++++GTGQ+PKF +DMF T R+LI TSE+SL Sbjct: 179 QCMLDLHVSQHGYEEVNVPIIVNADSLHGTGQLPKFEEDMFSTQLGEHRRYLISTSEISL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL +EIIE+ LPLR + FRSEAGS GRDTRGM+RQHQF K ELVS+ + ++S Sbjct: 239 TNLVRNEIIEADRLPLRMVAHSLCFRSEAGSGGRDTRGMIRQHQFEKVELVSVCKPQESE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH RM CAE +L+ L L YR + LCTGD+GF+A KTYDLEVWL Q +YREISSCS C Sbjct: 299 GEHHRMTRCAETVLEMLGLPYRKILLCTGDMGFAATKTYDLEVWLPSQGMYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+ + + HTLNGSGVAVGR +IA++ENY NADGS+T+P VLRPY Sbjct: 359 GDFQARRMQARWRNSVTGKPELVHTLNGSGVAVGRAMIAVMENYQNADGSITVPEVLRPY 418 Query: 417 MNNLAVI 423 M+ L+ I Sbjct: 419 MDGLSRI 425 >gi|303235352|ref|ZP_07321969.1| serine--tRNA ligase [Finegoldia magna BVS033A4] gi|302493473|gb|EFL53262.1| serine--tRNA ligase [Finegoldia magna BVS033A4] Length = 421 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 196/424 (46%), Positives = 273/424 (64%), Gaps = 5/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR NPE + ALKKR E + +L+ DEK R +I+K+E ++A +N S Q+ Q Sbjct: 1 MLDIKRIRNNPEEIVEALKKRRGEYPIQKLLATDEKRREVIQKVESMKAEQNKLSKQVPQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L L + + L+ + ++ +++ + IPN P ++VP+G Sbjct: 61 MKKNG--EDTTELFKNLKKLSDDIKNLDDDLKDIDDEIREYLMEIPNTPNKDVPVGLDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + H+++G L ++DF+RATK+S +RFSV G A LERAL Sbjct: 119 ENLEMRKWGEPRKFDFDIKAHWDLGVDLDILDFERATKISKSRFSVFKGKGARLERALMN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSLTNL 239 FM+DLHT + GYTE++ P+L+ AM GTGQIPKF +DM +C D +L PT+EV +TNL Sbjct: 179 FMVDLHTDKQGYTEMNTPVLMSPSAMRGTGQIPKFKEDMFYCEKDDMYLAPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 EI+E SLP+ +T FR EAGSAGRDTRG++R HQF K E+V S+ E Sbjct: 239 LGGEILEQGSLPIYYTAFTQCFRREAGSAGRDTRGLIRNHQFEKVEMVKFVEPSTSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AEEIL+ L++ YRVV LC+GDLGFS+ TYD+EVW+ N Y EISSCS +F Sbjct: 299 EKLTNNAEEILQLLEIPYRVVRLCSGDLGFSSAMTYDIEVWMPSYNRYVEISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYRD N+K ++ HTLNGSG+A+GRC A++ENY ADGS+ IP VL+ Y Sbjct: 359 QARRANIRYRDENNK-PQYVHTLNGSGLAIGRCFAAVIENYQQADGSIKIPEVLQKYT-G 416 Query: 420 LAVI 423 +I Sbjct: 417 FDII 420 >gi|221065437|ref|ZP_03541542.1| seryl-tRNA synthetase [Comamonas testosteroni KF-1] gi|220710460|gb|EED65828.1| seryl-tRNA synthetase [Comamonas testosteroni KF-1] Length = 438 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 184/439 (41%), Positives = 270/439 (61%), Gaps = 17/439 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDIQ +R++ + + L+ R E +L+ + + + + E+++++RN S Q Sbjct: 1 MLDIQLLRKDLDSVVARLQTRKNPQAFLNVEAFKALESERKSIQTRTEELQSKRNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G +A K E + +K +L ++ + L+ +++ +PN+P E VP+G Sbjct: 61 IGMLMGKGEKDAAEAAKAEVAAMKTELEQSATRLDQIQTELQAMLAAVPNLPHESVPVGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+ +R G + ++H ++G +G +DF+ KLSGARF+V+ G +A L RA Sbjct: 121 DEEGNVEVRRFGTPRNFDFEIKDHVDLGAPIG-LDFEAGVKLSGARFTVMQGQIARLHRA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------------G 225 L QFM+DL T +HGYTE P +V +++ GTGQ+PKF D+F Sbjct: 180 LAQFMLDLQTEQHGYTECYVPYIVNSDSLKGTGQLPKFEGDLFAAQKGGQDAEPLPDTAA 239 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPT+EV LTNL E++ LP++ T +P FRSEAGS GRDTRG++RQHQF K E Sbjct: 240 LYLIPTAEVPLTNLVRDEVLAEDRLPIKLTAHSPCFRSEAGSGGRDTRGLIRQHQFDKVE 299 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I E S+ E M AE +L++L L YRV+SLCTGD+GF A KTYDLEVW+ Q Sbjct: 300 MVQIVHPEKSYEALEEMTGHAEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWVPAQG 359 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISS S C FQ+RRM +R+++ ++ + HTLNGSG+AVGR L+A+LENY NADG Sbjct: 360 TYREISSVSNCEAFQARRMQARFKNAQGRN-ELVHTLNGSGLAVGRTLVAVLENYQNADG 418 Query: 406 SVTIPTVLRPYMNNLAVIK 424 S+T+P L YM ++K Sbjct: 419 SITVPEALVSYMGGKTLLK 437 >gi|169823798|ref|YP_001691409.1| seryl-tRNA synthetase [Finegoldia magna ATCC 29328] gi|238687725|sp|B0RZY8|SYS_FINM2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|167830603|dbj|BAG07519.1| seryl-tRNA synthetase [Finegoldia magna ATCC 29328] Length = 421 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 196/424 (46%), Positives = 273/424 (64%), Gaps = 5/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR NPE + ALKKR E + +L+ DEK R +I+K+E ++A +N S Q+ Q Sbjct: 1 MLDIKRIRNNPEEIVEALKKRRGEYPIQKLLATDEKRREVIQKVESMKAEQNKLSKQVPQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L L + + L+ + ++ +++ + IPN P ++VP+G Sbjct: 61 MKKNG--EDTTELFKNLKKLSDDIKNLDDDLKDIDDEIREYLMEIPNTPNKDVPVGLDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + H+++G L ++DF+RATK+S +RFSV G A LERAL Sbjct: 119 ENLEMRKWGEPRKFDFDIKAHWDLGVDLDILDFERATKISKSRFSVFKGKGARLERALMN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSLTNL 239 FM+DLHT + GYTE++ P+L+ AM GTGQIPKF +DM +C D +L PT+EV +TNL Sbjct: 179 FMVDLHTDKQGYTEMNTPVLMSPSAMMGTGQIPKFKEDMFYCEKDDMYLAPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 EI+E SLP+ +T FR EAGSAGRDTRG++R HQF K E+V S+ E Sbjct: 239 LGGEILEQGSLPIYYTAFTQCFRREAGSAGRDTRGLIRNHQFEKVEMVKFVEPSTSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AEEIL+ L++ YRVV LC+GDLGFS+ TYD+EVW+ N Y EISSCS +F Sbjct: 299 EKLTNNAEEILQLLEIPYRVVRLCSGDLGFSSAMTYDIEVWMPSYNRYVEISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYRD N+K ++ HTLNGSG+A+GRC A++ENY ADGS+ IP VL+ Y Sbjct: 359 QARRANIRYRDENNK-PQYVHTLNGSGLAIGRCFAAVIENYQQADGSIKIPEVLQKYT-G 416 Query: 420 LAVI 423 +I Sbjct: 417 FDII 420 >gi|121595739|ref|YP_987635.1| seryl-tRNA synthetase [Acidovorax sp. JS42] gi|166200592|sp|A1WBD4|SYS_ACISJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|120607819|gb|ABM43559.1| seryl-tRNA synthetase [Acidovorax sp. JS42] Length = 442 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 191/442 (43%), Positives = 269/442 (60%), Gaps = 21/442 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ L+ R E +L+ + + + + E+++++RN S Q Sbjct: 1 MLDILLLRKDLASAVARLETRKKPQAFLNVEAFQALESERKTIQMRTEELQSQRNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G +A K + + +K +L ++ L+ +++ +PN+P E VP+G+ Sbjct: 61 IGMLMGKGEKDAAEAAKAQVAAIKAELDGSATRLDQIQGELQTMLAAVPNLPHESVPVGS 120 Query: 118 SANENILIRSV----GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + N+ +R + S ++H ++GE LG +DFD KLSG+RF+V+ G +A Sbjct: 121 DESANVEVRRWSPDGQQPRSLGFTPKDHVDLGEPLG-LDFDMGVKLSGSRFTVMKGGIAR 179 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------------C 221 L RAL QFM+D+ T EHGYTE P +V +++ GTGQ+PKF D+F Sbjct: 180 LHRALAQFMLDVQTQEHGYTECYVPYVVNADSLKGTGQLPKFEGDLFAAQKGGQDAEPVP 239 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 +LIPTSEV LTN E++ LPL+ T P FRSEAGS GRDTRGM+RQHQF Sbjct: 240 DNAQLYLIPTSEVPLTNFVRDEVLAEAQLPLKLTAHTPCFRSEAGSYGRDTRGMIRQHQF 299 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E+V I + S+ E M AE +L++L L YRV+SLCTGD+GF A KTYDLEVWL Sbjct: 300 DKVEMVQIVHPDKSYEALEEMTRHAEAVLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWL 359 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 QN YREISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LENY Sbjct: 360 PAQNTYREISSVSNCEAFQARRLQARFKNAQGKN-ELVHTLNGSGLAVGRTLVAVLENYQ 418 Query: 402 NADGSVTIPTVLRPYMNNLAVI 423 N DGSVTIP VLRPYM A + Sbjct: 419 NEDGSVTIPEVLRPYMGGQATL 440 >gi|269468360|gb|EEZ80031.1| seryl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 441 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 188/431 (43%), Positives = 268/431 (62%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML + +R + + + ALKKR+ + L+ + + ++++ RN S IG+ Sbjct: 13 MLSKKQLRNDIKAVSEALKKRNFSFDINQLEFLENQRKKNQINTQELQNLRNMQSKSIGK 72 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L S L +QL + E + S + ++ +PN+P E VP G S + Sbjct: 73 AKASG--EDIKPLLEAVSDLGDQLDEAKSELQNIQSQISDIVMAMPNIPHESVPRGNSED 130 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ +++H ++GEA G +DF+ A K+SGARFSV+TG +A L RAL Q Sbjct: 131 DNVEVSKWGEPGQYDFEAKDHVDLGEAYG-LDFETAVKISGARFSVMTGKIARLHRALTQ 189 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------RWLIPTS 232 FM+D H +GY E P LV E++ GTGQ+PKF D+F T +LIPT Sbjct: 190 FMLDQHVEVNGYVEAYVPYLVNAESLTGTGQLPKFEADLFKTHLHGEEGDAKTLYLIPTG 249 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TN+ I++ LPL+F PSFRSEAG+ G+DTRG++RQHQF K ELV + + Sbjct: 250 EVPITNMVRDTIVKEDDLPLKFVGHTPSFRSEAGAYGKDTRGLIRQHQFEKVELVQVVKA 309 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 +DS+ E + + AE IL+ L+L YR V LC GDLGFSA KTYDLEVWL GQ+ YREISS Sbjct: 310 QDSYQALEELTAHAEGILQALELPYRKVVLCAGDLGFSAAKTYDLEVWLPGQDAYREISS 369 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RR+ R+++P + + HTLNGSG+AVGR L+A+LEN+ ADGS+ IP+V Sbjct: 370 CSCFEDFQARRLQLRWKNPETNKSELLHTLNGSGLAVGRTLVAVLENHQKADGSIKIPSV 429 Query: 413 LRPYMNNLAVI 423 L+ YM L +I Sbjct: 430 LQSYMGGLDII 440 >gi|310819975|ref|YP_003952333.1| seryl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|309393047|gb|ADO70506.1| Seryl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 426 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 204/427 (47%), Positives = 275/427 (64%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++ QN + + LK R L + R L +E + ARRN+ + ++ + Sbjct: 1 MLDLRYVAQNFDAVVARLKARSGNLDLGPFQKLFTERRELYVSVEGLSARRNAANDEM-K 59 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ + +DAL+ + + +++ E EV + +++ IPN+P E VP G S Sbjct: 60 RKAKEDPKALDALRGDLRAVSQEIKEKEARLKEVEEEISRILLLIPNIPHESVPTGASEQ 119 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++ R+ G+KP + R+HFEIGE LG++DF+RA K+SG+RF+ LA LERAL Sbjct: 120 DNVVTRTWGEKPDFLFTPRQHFEIGEKLGMLDFERAAKVSGSRFTFYKAALARLERALVT 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FMID+HT + GYTE+ P LV E M GTGQ+PKF DD F T R+LIPT+EV +TN Sbjct: 180 FMIDVHT-QKGYTELLPPYLVLRETMMGTGQLPKFEDDAFKTSGDPERFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI+E LPL++ +P FR+EAG+AGRDTRG++RQHQF K ELV E S +E Sbjct: 239 YHSDEILEGGQLPLKYCAFSPCFRAEAGAAGRDTRGLIRQHQFHKVELVKFATPETSLSE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M A +IL+RL LH+RV+ LCTGD+GF+A KT+D+EVWL GQ YREISSCS CG+ Sbjct: 299 LEGMTDDACDILRRLGLHHRVMLLCTGDMGFAARKTFDIEVWLPGQGAYREISSCSDCGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR + HTLNGSG+AVGR IAILENY DGSV IP L PYM Sbjct: 359 FQARRAKIRYRAQKGDKPQLLHTLNGSGLAVGRTSIAILENYQREDGSVAIPDALVPYMG 418 Query: 419 NLAVIKK 425 L I+ Sbjct: 419 GLKEIRP 425 >gi|71274488|ref|ZP_00650776.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon] gi|71898321|ref|ZP_00680494.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1] gi|170730591|ref|YP_001776024.1| seryl-tRNA synthetase [Xylella fastidiosa M12] gi|238687926|sp|B0U3G5|SYS_XYLFM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|71164220|gb|EAO13934.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon] gi|71731844|gb|EAO33902.1| Seryl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1] gi|167965384|gb|ACA12394.1| Serine--tRNA ligase [Xylella fastidiosa M12] Length = 426 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 205/427 (48%), Positives = 279/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ L L R + +L+ + + + +++++ RNS S IG Sbjct: 1 MLDPTLLRQQLAKLAECLLTVRGFTLDVAALEALESERKRIQVHTQELQSLRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA ++G V AL E + + L E E+ + L+K+ IPN+P ++VP+G Sbjct: 61 QARSKG--EDVSALMAEVAAFSDDLKASEIALEEIRTELEKVALDIPNLPQQDVPLGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ G + ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 RENVEQARWGVPRTFDFAIKDHVELGACHGWLDAESAAKLSGARFTVLRGPIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 Q M+DLH S+HGY EV+ P++V ++++GTGQ+PKF +DMF T R+LI TSE+SL Sbjct: 179 QCMLDLHVSQHGYEEVNVPIIVNADSLHGTGQLPKFEEDMFSTQLGEHRRYLISTSEISL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL +EIIE+ LPLR + FRSEAGS GRDTRGM+RQHQF K ELVS+ + ++S Sbjct: 239 TNLVRNEIIEADRLPLRMVAHSLCFRSEAGSGGRDTRGMIRQHQFEKVELVSVCKPQESE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH RM CAE +L+ L L YR + LCTGD+GF+A KTYDLEVWL Q +YREISSCS C Sbjct: 299 GEHHRMTRCAETVLEMLGLPYRKILLCTGDMGFAATKTYDLEVWLPSQGMYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+ + + HTLNGSGVAVGR +IA++ENY NADGS+T+P VLRPY Sbjct: 359 GDFQARRMQARWRNSVTGKPELVHTLNGSGVAVGRAMIAVMENYQNADGSITVPEVLRPY 418 Query: 417 MNNLAVI 423 M+ L+ I Sbjct: 419 MDGLSRI 425 >gi|302379863|ref|ZP_07268346.1| serine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|302312341|gb|EFK94339.1| serine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] Length = 421 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 197/424 (46%), Positives = 274/424 (64%), Gaps = 5/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR NPE + ALKKR E + +L+ DEK R +I+K+E ++A +N S Q+ Q Sbjct: 1 MLDIKRIRNNPEEIVEALKKRRGEYPIQKLLATDEKRREVIQKVESMKAEQNKLSKQVPQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L L + + L+ + ++ +++ + IPN P ++VP+G Sbjct: 61 MKKNG--EDTTELFKNLKKLSDDIKNLDDDLKDIDDEIREYLMEIPNTPNKDVPVGLDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ + H+++G L ++DF+RATK+S +RFSV G A LERAL Sbjct: 119 ENLEMRKWGEPRKFDFDIKAHWDLGVDLDILDFERATKISKSRFSVFKGKGARLERALMN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSLTNL 239 FM+DLHT + GYTE++ P+L+ AM GTGQIPKF +DM +C D +L PT+EV +TNL Sbjct: 179 FMVDLHTDKQGYTEMNTPVLMSPSAMRGTGQIPKFKEDMFYCEKDDMYLAPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 S EI+E SLP+ +T FR EAGSAGRDTRG++R HQF K E+V S+ E Sbjct: 239 LSGEILEQGSLPIYYTAFTQCFRREAGSAGRDTRGLIRNHQFEKVEMVKFVEPSTSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AEEIL+ L++ YRVV LC+GDLGFS+ TYD+EVW+ N Y EISSCS +F Sbjct: 299 EKLTNNAEEILQLLEIPYRVVRLCSGDLGFSSAMTYDIEVWMPSYNRYVEISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N RYRD N+K ++ HTLNGSG+A+GRC A++ENY ADGS+ IP VL+ Y Sbjct: 359 QARRANIRYRDENNK-PQYVHTLNGSGLAIGRCFAAVIENYQQADGSIKIPEVLQKYT-G 416 Query: 420 LAVI 423 +I Sbjct: 417 FDII 420 >gi|9107447|gb|AAF85085.1|AE004040_10 seryl-tRNA synthetase [Xylella fastidiosa 9a5c] Length = 432 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 203/427 (47%), Positives = 279/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ L L R + +L+ + + + +++++ RNS S IG Sbjct: 7 MLDPTLLRQQLAKLAECLSTVRGFTLDVAALEALESERKRIQVHTQELQSLRNSKSKAIG 66 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA ++G V +L E + + L E E+ + L+K+ IPN+P ++VP+G Sbjct: 67 QARSKG--EDVSSLMAEVAAFSDDLKASEIALEEIRTELEKVALGIPNLPQQDVPLGADE 124 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ G + ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 125 RDNVEQARWGVPRTFDFSIKDHVELGACHGWLDAESAAKLSGARFTVLRGPIARLHRALA 184 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 Q M+DLH +HGY EV+ P++V +++YGTGQ+PKF +DMF T R+LI TSE+SL Sbjct: 185 QCMLDLHVRQHGYEEVNVPIIVNADSLYGTGQLPKFEEDMFSTQLGEHRRYLISTSEISL 244 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL +EIIE+ LPLR + FRSEAGS GRDTRGM+RQHQF K ELVS+ + ++S Sbjct: 245 TNLVRNEIIEADRLPLRMAAHSLCFRSEAGSGGRDTRGMIRQHQFEKVELVSVCKPQESE 304 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+RM CAE +L+ L L YR + LCTGD+GF+A KTYDLEVWL Q +YREISSCS C Sbjct: 305 GEHQRMTRCAETVLEMLGLPYRKILLCTGDMGFAATKTYDLEVWLPSQGMYREISSCSNC 364 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+R+ + + HTLNGSGVAVGR +IA++ENY NADGS+T+P VLRPY Sbjct: 365 GDFQARRMQARWRNSVTGKPELVHTLNGSGVAVGRAMIAVMENYQNADGSITVPEVLRPY 424 Query: 417 MNNLAVI 423 M+ L+ I Sbjct: 425 MDGLSRI 431 >gi|239816998|ref|YP_002945908.1| seryl-tRNA synthetase [Variovorax paradoxus S110] gi|259516224|sp|C5CWN5|SYS_VARPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|239803575|gb|ACS20642.1| seryl-tRNA synthetase [Variovorax paradoxus S110] Length = 443 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 187/446 (41%), Positives = 263/446 (58%), Gaps = 26/446 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ L+KR +L+ + + L + E+I+ARRN+ + Q Sbjct: 1 MLDITLLRKDLASAVAGLEKRKKNQPYLDVSAFTALEAERKTLQTRTEEIQARRNALNKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG A+G VDAL E + LK + ++ L+ L+ +PN+P VP+G Sbjct: 61 IGPLKAKGEP--VDALMAEVNALKAEQESQSARLDQIQPELQALLLAVPNLPHVSVPVGE 118 Query: 118 SANENILIRSVGKK-------PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 N+ +R + +++H ++G LG +DF+ KL+G+RF+V+ G Sbjct: 119 DEAGNVEMRRWSPQGGAGANAAPLPFAAKDHVDLGAPLG-LDFEMGAKLAGSRFTVMKGP 177 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---------- 220 +A L RAL QFM+D+ T +HGY E P +V + GTGQ+PKF D+F Sbjct: 178 IARLHRALAQFMLDIQTEKHGYAECYVPYIVNAATLSGTGQLPKFEGDLFAAKKGGQEGE 237 Query: 221 --CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 +LIPTSEV LTN E++ LP++ T P FRSEAGSAGRDTRGM+RQ Sbjct: 238 PAPDHSALYLIPTSEVPLTNFVRDEVVAEAQLPIKLTAHTPCFRSEAGSAGRDTRGMIRQ 297 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 HQF K E+V I E S+ E+M AE +L+ L+L YRVV LCTGD+GF A KTYDLE Sbjct: 298 HQFDKVEMVQIVHPEKSYDALEQMTGHAEAVLQALELPYRVVLLCTGDMGFGATKTYDLE 357 Query: 339 VWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 VWL QN YREISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LE Sbjct: 358 VWLPAQNTYREISSVSNCEAFQARRLQARFKNAQGKN-ELVHTLNGSGLAVGRTLVAVLE 416 Query: 399 NYLNADGSVTIPTVLRPYMNNLAVIK 424 N+ N DGS+ +P LRPY+ L +++ Sbjct: 417 NHQNEDGSINVPAALRPYLGGLELLR 442 >gi|220910001|ref|YP_002485312.1| seryl-tRNA synthetase [Cyanothece sp. PCC 7425] gi|254783020|sp|B8HL86|SYS_CYAP4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|219866612|gb|ACL46951.1| seryl-tRNA synthetase [Cyanothece sp. PCC 7425] Length = 424 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 188/422 (44%), Positives = 261/422 (61%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +R NP+ L KR + + IL LD + R L + ++AR N+ + QIG+ Sbjct: 1 MIDLKLLRDNPQEFSDRLAKRG-KFDLQPILDLDRQQRELEVERSQLQARSNAIAKQIGE 59 Query: 61 AIAEGNLSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + GN S ++ L+ E +K L LE +E ++ L++ + IPN+P + P+G Sbjct: 60 KMKSGNKSDPALEGLRAEAGQIKTTLAELEPKEKQLKDELEQQLLLIPNLPSDSTPVGKD 119 Query: 119 ANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 EN+ +R + H+E+GE LG+++F+R+ K++ +RF+ L G A LERA Sbjct: 120 EAENVEVRRWGEEYIPKSKDILPHWEMGEKLGILNFERSVKIAQSRFATLIGAGAALERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L QFM+D HT GY EV P L+ ++ TGQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LIQFMLDRHT-SAGYLEVLPPFLINSTSLTATGQLPKFAEESFKCEADDLWLAPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EI+ +++LP+ P FR EAGS GRDTRG++R HQF K ELV + S Sbjct: 239 TNLYRDEILTAENLPIYHCAYTPCFRREAGSYGRDTRGLIRLHQFNKVELVKLVHPSTSE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHE ++ A IL+ L L YRV+ LCTGDLGFSA K YDLEVWL YREISSCS Sbjct: 299 QEHEALVRDASAILEALQLPYRVIELCTGDLGFSAAKCYDLEVWLPSAGCYREISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR R+++ K +F HTLNGSG+AVGR + AILENY DGSV IP VL+PY Sbjct: 359 YDFQARRGKIRFKESGQKGTQFVHTLNGSGLAVGRTMAAILENYQQPDGSVRIPPVLQPY 418 Query: 417 MN 418 + Sbjct: 419 LG 420 >gi|325921976|ref|ZP_08183781.1| seryl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] gi|325547526|gb|EGD18575.1| seryl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] Length = 449 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 209/450 (46%), Positives = 281/450 (62%), Gaps = 29/450 (6%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +RQ+P L L+ R + + SL+ + + + + +++++ RNS S IG Sbjct: 1 MLDPALLRQHPADLAERLRSTRSFALDTAKLESLESERKRMQVRTQELQSLRNSKSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+G V AL E + ++L + ++ L+KL + IPN+P +VP+G S Sbjct: 61 QAKAKG--EDVTALMAEVAGFADELLQSQVHLKDIQVKLEKLYAVIPNLPHADVPLGKSE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ GK ++H E+G G +D + A KLSGARF+VL G +A L RAL Sbjct: 119 ADNVEQSRWGKPRQFDFAVKDHVELGAPNGWLDGETAAKLSGARFTVLRGPIARLHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-------------- 225 QFM+DLH EHGY E + PLLV E+M+GTGQ+PKF DD+F + Sbjct: 179 QFMLDLHVGEHGYEETNVPLLVNAESMHGTGQLPKFEDDLFRIYEDEYDSQTDEETGEVA 238 Query: 226 ------------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 +LIPTSEV LTN+ EI++++ LPLR T + FR+EAGS GRDTR Sbjct: 239 HWRTGQIDPEPAYYLIPTSEVPLTNIVRDEIVDAERLPLRMTAHSMCFRAEAGSGGRDTR 298 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 GM+RQHQF K ELV+ EDS EH+RM CAE +L++L L YR V LCTGD+GF+A K Sbjct: 299 GMIRQHQFEKVELVTACAPEDSDAEHQRMTRCAEVVLEKLGLPYRKVLLCTGDMGFAAIK 358 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 TYDLEVWL Q+ YREISSCS CG+FQ+RRM +R+R+P S + HTLNGSG AVGR + Sbjct: 359 TYDLEVWLPSQDTYREISSCSNCGDFQARRMQARWRNPTSGKPELMHTLNGSGTAVGRAM 418 Query: 394 IAILENYLNADGSVTIPTVLRPYMNNLAVI 423 IA++ENY NADGS+ +P VLRPYM + I Sbjct: 419 IAVMENYQNADGSIDVPEVLRPYMGGIERI 448 >gi|197105423|ref|YP_002130800.1| seryl-tRNA synthetase [Phenylobacterium zucineum HLK1] gi|238690162|sp|B4RDI1|SYS_PHEZH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|196478843|gb|ACG78371.1| seryl-tRNA synthetase [Phenylobacterium zucineum HLK1] Length = 426 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 221/423 (52%), Positives = 287/423 (67%), Gaps = 1/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+ PE + A + + IL LDE R ++ +A RN S +IGQ Sbjct: 1 MHDIRAIRETPELYEKAWAAKGSPGKVAEILKLDEALRAAQTALQAAQAERNEASKKIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+ + + L TLK+ L + E +L+ L++ +PN+P EVP G + Sbjct: 61 AKAQKDEAEATRLMAHVETLKKALEEQGEVERSAGEALRALLAGLPNIPAAEVPDGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G +P AI ++H +GEA+GLMDF+ A ++SGARF VL G LA LERALGQ Sbjct: 121 DNVEVRRWG-EPRAIAAPKDHATLGEAMGLMDFEAAARMSGARFVVLKGQLARLERALGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DL T EHGYTEV+ PLLV D A YGT ++PKFA+D+F TTDGRWLIPT+EV LT+L Sbjct: 180 FMLDLQTQEHGYTEVNPPLLVNDAAAYGTDKLPKFAEDLFQTTDGRWLIPTAEVPLTSLV 239 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +I+ + LPLR+T L P FRSEAG++GRDTRGM+RQHQF K ELVSIT E S EHE Sbjct: 240 MGQIVAEEELPLRYTALTPCFRSEAGASGRDTRGMIRQHQFNKVELVSITTPEQSADEHE 299 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM+ CAE +LKRL+L +R + LC GD+GF A KTYDLEVWL Q YREISSCS G+FQ Sbjct: 300 RMVGCAEAVLKRLELPFRTMLLCRGDMGFGARKTYDLEVWLPSQEKYREISSCSNTGDFQ 359 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM++R + K ++ HTLNGSG+AVGR L+A+LENY + G + IP LRPYM + Sbjct: 360 ARRMDARAKKAGEKGTRYVHTLNGSGLAVGRTLVAVLENYQDEGGRIAIPEALRPYMPGM 419 Query: 421 AVI 423 I Sbjct: 420 THI 422 >gi|20092841|ref|NP_618916.1| seryl-tRNA synthetase [Methanosarcina acetivorans C2A] gi|30173184|sp|Q8TIU3|SYS_METAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|19918144|gb|AAM07396.1| seryl-tRNA synthetase [Methanosarcina acetivorans C2A] Length = 421 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 275/428 (64%), Gaps = 9/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+++++R NP+ + AL R++ + +L D R + + + ++ +RN + +I Sbjct: 1 MLELKFVRNNPDIVGRALVNRNMGTELIDSLLEYDVAWRKCLTEGDSLKHKRNVVTREIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q E +L NE + ++ ++ + + S + +++ IPN+P E P+G Sbjct: 61 QLKKENKDTLSK--INEMQDINNRIKEIDDKIRDYKSKINEIMLSIPNIPSETTPVGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N ++R VG+K + H+EIGEAL ++DF+R K++G F+V G A LERAL Sbjct: 119 NDNPVVRVVGEKKKFTFTPKPHWEIGEALDILDFERGAKIAGQGFTVYKGLGAKLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTN 238 FM+D+HT + GY EV P+L+ ++AM GTGQ+PKF +DM+ C DG +L PT+EV +TN Sbjct: 179 NFMLDVHTRQ-GYLEVFPPVLINEKAMTGTGQLPKFKEDMYLCCADGYYLAPTAEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ E +E +LP+ T FR EAG G+DTRG++RQHQF K ELV + E S+ E Sbjct: 238 LFMDEYME--NLPVSLTAYTACFRREAGKHGQDTRGIIRQHQFNKVELVKFVKPETSYEE 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E++ AEEILK L L YR+V+LCTGDLGFSA KTYD+EVW+ Q YREISSCS N Sbjct: 296 LEKLTLDAEEILKLLKLPYRLVTLCTGDLGFSAAKTYDIEVWVPTQEKYREISSCSNFEN 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R+R P +F HTLNGSG+AVGR ++AILENY DGSV IP VLRPYM Sbjct: 356 FQARRANIRFRTPEG--PQFVHTLNGSGLAVGRTVVAILENYQREDGSVEIPEVLRPYMG 413 Query: 419 NLAVIKKE 426 + I++E Sbjct: 414 GVEEIREE 421 >gi|332285168|ref|YP_004417079.1| seryl-tRNA synthetase [Pusillimonas sp. T7-7] gi|330429121|gb|AEC20455.1| seryl-tRNA synthetase [Pusillimonas sp. T7-7] Length = 450 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 189/454 (41%), Positives = 262/454 (57%), Gaps = 31/454 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R++ + AL+ R + +E L+ + + + + E ++ARRN+ S IGQ Sbjct: 1 MLDPNQLRKDLPAVVKALELRGIAFDTERFSQLEARRKSVQVETEALQARRNAVSKLIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + G + + E+ + +L LE + V L + IPN+P VP G ++ Sbjct: 61 LKSRGEDASKE--MAESQQIPARLKELENDLAAVQGELNAWLMTIPNLPHASVPAGKDSD 118 Query: 121 ENILIRSVG----------KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 +NI +R ++H +GE LG +DF+ A KLSGARF +L G Sbjct: 119 DNIEVRRWIPPGLETDADGNPQPLAFEPKDHVALGEPLG-LDFETARKLSGARFMMLRGP 177 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------- 222 +A L RAL QFM+DL T+EHGY E P +V ++GTGQ+PKF DDMF Sbjct: 178 IARLHRALAQFMLDLQTTEHGYQECYTPYIVNSSTLFGTGQLPKFKDDMFWVTKGGQDDE 237 Query: 223 ---------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + +LI TSE++L I+ S++LPL+ T P FRSEAGS GRDTR Sbjct: 238 ASGQEEESAHEDLYLISTSEITLAGSVRDTIVASEALPLKMTAHTPCFRSEAGSGGRDTR 297 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 GM+RQHQF K E+V I + S+ E M+ AE +L+RL + YRVV LC GD+GF A K Sbjct: 298 GMIRQHQFDKVEMVQIVHPDHSYDALEEMVGHAEAVLQRLGVAYRVVLLCGGDMGFGAAK 357 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 TYDLEVWL QN +REISS S C FQ+RRM +RYR K ++ H+LNGSG+AVGR L Sbjct: 358 TYDLEVWLPAQNTWREISSVSNCEAFQARRMQARYRPEKGK-PEYLHSLNGSGLAVGRAL 416 Query: 394 IAILENYLNADGSVTIPTVLRPYMNNLAVIKKEH 427 +A+LEN+ ADGSV +P LRPYM + ++ + Sbjct: 417 VAVLENHQQADGSVRVPEALRPYMGGIDLLAVQG 450 >gi|118594714|ref|ZP_01552061.1| seryl-tRNA synthetase [Methylophilales bacterium HTCC2181] gi|118440492|gb|EAV47119.1| seryl-tRNA synthetase [Methylophilales bacterium HTCC2181] Length = 426 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 187/429 (43%), Positives = 267/429 (62%), Gaps = 9/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI +R + + + LK R + + L+ + ++ K ++++ +RN S +IG Sbjct: 1 MLDINQLRNELDEVSLRLKSRGFKFDAALFTDLETQRKVHQVKAQELQEKRNDISKKIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++GN L + + + E L + + + +PN+P + VP G + + Sbjct: 61 EKSKGN--EATDLMADVTQINESLKEQNDALTFIQKQIHDYLLKVPNLPHKSVPQGLTED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+++R +G+K ++H ++G LG +DFD KLSGARF+V+ +LA L RALGQ Sbjct: 119 DNVIVRELGEKKLFDFEVKDHVDLGHPLG-LDFDMGIKLSGARFAVIRSNLALLHRALGQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----DGRWLIPTSEVS 235 FM+D HT EH Y E P LV +E++ GTGQ+PKF +D+F T D +LIPT EV Sbjct: 178 FMLDTHTREHNYEECYTPYLVNNESLLGTGQLPKFEEDLFNTKKGGSEDNLFLIPTGEVP 237 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTN I++ LP+R T L P FRSEAGS G+DTRGM+RQHQF K E+V I E S Sbjct: 238 LTNFVRDVIVDKNELPIRLTALTPCFRSEAGSYGKDTRGMIRQHQFDKVEMVQIAHPESS 297 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + + ML AE I+++L L YRV+SLC GD+GF A KT+D+EVW+ QN YREISS S Sbjct: 298 YEALDEMLGHAESIMQKLALPYRVISLCAGDMGFGATKTFDIEVWVPSQNCYREISSVSN 357 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +FQ+RR+ +R+RD N K KF HTLNGSGVAVGR ++A++ENY +G + +P VL P Sbjct: 358 CEDFQARRLKARFRD-NDKKNKFLHTLNGSGVAVGRAMVAVMENYQLKNGDIEVPEVLIP 416 Query: 416 YMNNLAVIK 424 YM + VI Sbjct: 417 YMGGIKVIT 425 >gi|239831764|ref|ZP_04680093.1| seryl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] gi|239824031|gb|EEQ95599.1| seryl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] Length = 407 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 241/404 (59%), Positives = 303/404 (75%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + S +++LDEK R + K++ + RRN+ S +IG+A+A + + D LK E + LK Sbjct: 2 GAQSLSSELMALDEKRREYVGKVQAAQERRNAASKEIGKAMAAKDAATADKLKAEVAELK 61 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + L E EE + L +S IPN+PLE+VP+G ++N+ IR +G + + +EH Sbjct: 62 DFLAQAEDEERRLTRELNDALSSIPNIPLEDVPLGKDESDNVEIRRIGNQRNFAFQPKEH 121 Query: 142 FEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 FE+GEALG MDF+RA KL+G+RF+VL G LA LERALGQFM+DLHT+EHGYTE PL+V Sbjct: 122 FELGEALGYMDFERAAKLAGSRFTVLKGPLARLERALGQFMLDLHTTEHGYTETMPPLMV 181 Query: 202 RDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 RDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL + EI+++KSLP R+T L P F Sbjct: 182 RDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLVADEIVDAKSLPQRYTALTPCF 241 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVS 321 RSEAGSAGRDTRGMLRQHQF K E+VSIT + S EHERM +CAEE+LKRL L +R V Sbjct: 242 RSEAGSAGRDTRGMLRQHQFLKVEMVSITDADSSIEEHERMTACAEEVLKRLGLPFRTVV 301 Query: 322 LCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHT 381 LCTGD+GF A KTYD+EVWL GQN YREISSCS CG+FQ RRMN+RYR KS +F HT Sbjct: 302 LCTGDMGFGAQKTYDIEVWLPGQNTYREISSCSVCGDFQGRRMNARYRPEGEKSTRFVHT 361 Query: 382 LNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 LNGSGVAVGR LIA++ENY DGS+ IP L+PYM L I+K Sbjct: 362 LNGSGVAVGRALIAVMENYQEEDGSIHIPEALQPYMGGLTRIEK 405 >gi|171057383|ref|YP_001789732.1| seryl-tRNA synthetase [Leptothrix cholodnii SP-6] gi|238689100|sp|B1Y0I6|SYS_LEPCP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|170774828|gb|ACB32967.1| seryl-tRNA synthetase [Leptothrix cholodnii SP-6] Length = 431 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 192/430 (44%), Positives = 267/430 (62%), Gaps = 14/430 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI +R++ + + L R +E +L+ + R L ED++ARRN S Q Sbjct: 1 MIDITLLRKDLDAVLARLSARKNPQPFLDAERFRALEAERRTLQSSTEDLQARRNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG A+G V + +E + + L + ++ L ++ +PN+P +VP+G Sbjct: 61 IGHLKAKGG--DVAPVMDEVGGIGDTLKAGAERLEQIQGELGLMLMHVPNLPQADVPVGA 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+ +R G R+H ++G LG +DF+ + KLSGARFS L G A L RA Sbjct: 119 DETANLEVRRWGSPREFDFTVRDHVDLGAPLG-LDFETSAKLSGARFSFLKGPAARLHRA 177 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIP 230 L QFM+D+ T EHGYTE P +V E + GTGQ+PKF +DMF T ++LI Sbjct: 178 LAQFMLDVQTQEHGYTECYTPYIVNREVLEGTGQLPKFKEDMFWVSRGGDETQPEQYLIS 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 TSE+SLTN +++ + LP++ T +P FRSEAGSAGRDTRG++RQHQF K E+V IT Sbjct: 238 TSEISLTNSVREQVLAADQLPIKLTAHSPCFRSEAGSAGRDTRGLIRQHQFDKVEMVQIT 297 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E S E M+ AE +L++L L YRV+ L TGD+GF + KTYDLEVW+ Q YREI Sbjct: 298 TPEQSDAALESMVGHAEAVLQKLGLPYRVLLLSTGDMGFGSAKTYDLEVWVPAQATYREI 357 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS C FQ+RRM +R+++ K+ +F HTLNGSG+AVGR L+A+LENY NADGS+T+P Sbjct: 358 SSCSNCEAFQARRMQTRFKNAQGKN-EFVHTLNGSGLAVGRTLVAVLENYQNADGSITVP 416 Query: 411 TVLRPYMNNL 420 +LRPY+ L Sbjct: 417 EILRPYLGGL 426 >gi|170748700|ref|YP_001754960.1| seryl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] gi|170655222|gb|ACB24277.1| seryl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] Length = 467 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 230/446 (51%), Positives = 294/446 (65%), Gaps = 23/446 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP+ D L++R L P S +++LDE + + + + RRN+ + +IG Sbjct: 20 MHDIRAIRENPDAFDRDLQRRGLAPLSAELIALDEARKSSVSAAQANQERRNALAKEIGG 79 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + AL E + LK P L+ + +L ++ IPN P +VP G + Sbjct: 80 AKKAKDEDRAAALMAEVAALKAAEPELKAAQDAADRTLADRLAAIPNRPKPDVPEGADEH 139 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+L RS + REHFE+GEA GLMDF+ A KLSG+RF VL G LA LERALGQ Sbjct: 140 GNVLYRSHAATRERLTEGREHFELGEASGLMDFEAAAKLSGSRFVVLKGQLARLERALGQ 199 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----------------- 223 FM+DLHT EHGY EV+ P+LVRD AM+GT Q+PKF DD F Sbjct: 200 FMLDLHTQEHGYLEVAPPVLVRDAAMFGTAQLPKFEDDQFSVFKGLDYVRSLQGQAGADT 259 Query: 224 -----DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + WL+PT+EV LTNL I+ + LPLRFT L P FR+EAG+AGRDTRGMLRQ Sbjct: 260 APVSDEHFWLVPTAEVPLTNLVREAILREEELPLRFTALTPCFRAEAGAAGRDTRGMLRQ 319 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 HQF K ELVSIT E+S EHERML+ AE +LK+LDL YRV++LCTGD+GF++ KTYD+E Sbjct: 320 HQFSKVELVSITTPEESANEHERMLTSAEAVLKKLDLPYRVMTLCTGDMGFASQKTYDIE 379 Query: 339 VWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 VW+ GQ +REISSCS CG+FQ+RRMN+RYR + K + HTLNGSGVAVGR LIA++E Sbjct: 380 VWVPGQRTHREISSCSVCGDFQARRMNARYRGKDGK-PAYVHTLNGSGVAVGRALIAVME 438 Query: 399 NYLNADGSVTIPTVLRPYMNNLAVIK 424 NY N DGS+T+P+VL PYM L I+ Sbjct: 439 NYQNPDGSITVPSVLHPYMGGLNRIE 464 >gi|322368267|ref|ZP_08042836.1| seryl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320552283|gb|EFW93928.1| seryl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 451 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 174/435 (40%), Positives = 252/435 (57%), Gaps = 13/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR +P+ + L+ R + + L LD + R L + +D+R RN S IG+ Sbjct: 1 MLDRKFIRDHPDEVREGLENRGDDVDLDGFLDLDAEWRELKARGDDLRHERNEVSRSIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG A +S LKE+L +E + E+ L++ + IPNVP E VP+G Sbjct: 61 LKQEGKEEEAQAAIERSSALKEELEEVETKASELEEELEERMLEIPNVPHESVPVGADEG 120 Query: 121 ENILIRS--VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ R H+E+GE L ++D +RA K +G+ F L G A LE A+ Sbjct: 121 DNVEQRREGFDDLRDLPADVIPHYELGEELDIIDEERAAKTTGSGFYFLKGDGARLEHAI 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 QFM+D+H E Y ++ P+ + ++M GTGQ+PKFA+D + + WL PT+EV +T Sbjct: 181 MQFMLDVH-REQDYVDIFPPIPINSDSMTGTGQLPKFAEDAYKIEGEDLWLCPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y+ +I+ LPL+ P+FR EAG G +TRG++R HQF K E+V+ E+S+ Sbjct: 240 NMYADDILLRDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVEMVNFVEPEESYD 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---------NLYR 348 + +L AEE+L+RL+L YRV+ LCTGDLGF A K DLEVW G + Sbjct: 300 RLDILLDEAEEVLRRLELPYRVLELCTGDLGFKATKQIDLEVWAPGDDLDDGPEEGGRWL 359 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 E+S+ S +FQ+RR RYR +S ++ HTLN SG+A+ R ++AILE Y N DG+VT Sbjct: 360 EVSTASNFEDFQARRAGLRYRPERHESTEYLHTLNASGLALPRVMVAILEYYQNDDGTVT 419 Query: 409 IPTVLRPYMNNLAVI 423 IP LRPYM VI Sbjct: 420 IPEALRPYMGGQEVI 434 >gi|328675779|gb|AEB28454.1| Seryl-tRNA synthetase [Francisella cf. novicida 3523] Length = 426 Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 284/428 (66%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I+ N + + L R + + ++K + L ++ +D++++RN+ S +IGQ Sbjct: 1 MLDAKYIKDNLQQVAEKLATRGYQFDIAEFEAQEQKRKYLQERTQDLQSQRNTISKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G + + + E+L I+EK+ E+ S+ + + +PN+P ++VP+G N Sbjct: 61 RKAKG--EDTSDSFAKVNQINEELKIIEKDLKELQDSINQTLLSMPNLPADDVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI IR G +++H +IGE L ++DF A K++G+RF VL +A L R+L Sbjct: 119 DNIEIRRWGTPREFHPEAPAKDHADIGEILKMIDFKAAAKVTGSRFMVLKNKIAKLHRSL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSL 236 QFM+D+HT +HGY E+ P LV ++++YGTGQ+PKFA D+F LIPT+EV + Sbjct: 179 SQFMLDMHTEKHGYEELYVPYLVNNDSLYGTGQLPKFAADLFKLEGDFEYSLIPTAEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EI+++++LP +T P FRSEAGS GRDT+GM+RQHQF K ELV IT + Sbjct: 239 TNLVRDEILDTETLPRYYTAHTPCFRSEAGSYGRDTKGMIRQHQFEKVELVHITTADKGE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + S AE++L++L+L YRV+ LCTGD+GFSA KTYDLEVWL QN YREISSCS C Sbjct: 299 ESLELLTSHAEKVLQKLNLPYRVMKLCTGDMGFSAKKTYDLEVWLPSQNTYREISSCSWC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RRM +R+++P+ K + HTLNGSG+AVGR L+AI+ENY DGS+ +P L Y Sbjct: 359 GDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIENYQQEDGSIMVPDALINY 418 Query: 417 MNNLAVIK 424 M ++VIK Sbjct: 419 MGGISVIK 426 >gi|187736593|ref|YP_001878705.1| seryl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] gi|238691874|sp|B2UPP6|SYS_AKKM8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|187426645|gb|ACD05924.1| seryl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 426 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 184/430 (42%), Positives = 261/430 (60%), Gaps = 8/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IR+NPE + LK R + + +L+ DE R + + +++ RN+ S QI Sbjct: 1 MLDIRVIRENPEEVKARLKPRSGDAWKLVDDVLACDEARRNAETEKQALQSERNATSKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +G +++ + +++ L++ E + L L+ IPN+P E P+G Sbjct: 61 GMLKKKG--EDTSSIEARVREIGDRIRELDRVAEENAAQLTSLLMNIPNLPHLECPVGAD 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N I+ G+KP+ I ++H E+ LG++ F+ +++G+ F V G A LERAL Sbjct: 119 ETANPEIKLWGEKPA-IENPKDHVELAANLGMISFEDGARITGSGFVVYRGAGARLERAL 177 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 F+++ T E+GY EV P +V+ E M GTGQ+PKF +DM+ T +LIPT+EV +T Sbjct: 178 INFLLNTQTVENGYQEVGVPFVVKRECMEGTGQLPKFEEDMYGTEDQQMFLIPTAEVPVT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY I++ LP++ P FR EAGSAGR RGM+R HQF K ELV I + EDSF Sbjct: 238 NLYRDTILQESDLPIKMAAYTPCFRREAGSAGRINRGMIRVHQFDKVELVQILKPEDSFR 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E + S AE IL++L LHYRV+ LCTGDLGFS+ KTYD+EVW GQ Y E+SSCS Sbjct: 298 ELEVLRSHAESILQKLGLHYRVIELCTGDLGFSSAKTYDIEVWAPGQGQYLEVSSCSCFT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RRM RY+D + K+ +F HTLNGSG A+ R +A+LE Y DGS+ IP L PY Sbjct: 358 DYQARRMRLRYKDADGKN-QFCHTLNGSGTALPRLYVALLETYQQPDGSIRIPEALVPYF 416 Query: 418 NNLAVIKKEH 427 I+ E Sbjct: 417 -GADCIRPEQ 425 >gi|297181982|gb|ADI18158.1| seryl-tRNA synthetase [uncultured Verrucomicrobiales bacterium HF0200_39L05] Length = 456 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 167/433 (38%), Positives = 259/433 (59%), Gaps = 12/433 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 LDI+ R P+ + L R E + + ++ LD + R I +E+++A+RN+ S +IG Sbjct: 24 LDIRQFRDTPDLVRERLATRGEEFAAKVDVVVRLDAERREAITVVEELKAKRNAASKEIG 83 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + +A K E + +Q+ L+ + + + L+ + +PN+P +VPIG S Sbjct: 84 MLMGQKKTDDAEAKKAEVRDIGDQISELDNQTAQADAELRDTLLRLPNLPHADVPIGASE 143 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N IR G+KP+ + H E+ E+LGL+DF R KL+G+ F + +G A LERAL Sbjct: 144 EDNREIRQWGEKPNHDFEPKPHTELCESLGLVDFARGAKLAGSGFLLYSGWGARLERALI 203 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPT 231 Q+++DLH H YTEVS P +V + M G GQ PKF D + + +L+PT Sbjct: 204 QYLLDLHVHVHSYTEVSPPFMVDHDCMIGVGQFPKFEDQAYMVQEGLDEESRGKLYLVPT 263 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +E + N++ E++++ LP + +P FR+EAG+AG TRGM+R HQF K EL+ I Sbjct: 264 AEAPVANIHREELLKAGELPKNYCAYSPCFRAEAGAAGVGTRGMIRVHQFDKVELIKIVE 323 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E S++E + ML AE++L+ L+LHYR++ LCT D+ F + TYD+EVW GQ Y E+S Sbjct: 324 PEGSYSELDSMLGHAEKVLQSLNLHYRILQLCTADMSFGSATTYDIEVWAPGQGDYLEVS 383 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C ++Q+RRMN RY+D + + H LNGSG A+ R +A++E Y +DGS+ IP Sbjct: 384 SCSNCEDYQARRMNLRYKD-DGGKNRHPHILNGSGTALARLFVALIETYQQSDGSILIPE 442 Query: 412 VLRPYMNNLAVIK 424 ++PY+ I Sbjct: 443 PIQPYLR-AERIP 454 >gi|307151559|ref|YP_003886943.1| seryl-tRNA synthetase [Cyanothece sp. PCC 7822] gi|306981787|gb|ADN13668.1| seryl-tRNA synthetase [Cyanothece sp. PCC 7822] Length = 430 Score = 401 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 197/431 (45%), Positives = 264/431 (61%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IR+NPE + L +R+ IL LD++ R L ++ R N S I Sbjct: 1 MLDIKQIRENPEQVQERLNRRNAAKGYDLTPILELDQQQRELESSRIQLQTRSNEISKLI 60 Query: 59 GQAIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q I G + ALK E + +K +L LE +E E+ + ++ L+ +PN+P E PI Sbjct: 61 PQKIKAGSDPKGEEIKALKEEGNEVKNKLSSLEPQEREIKAQIENLLLQLPNLPAESTPI 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G EN+ +R G + H+EIGE LG++DF+RA K++ +RF L G A LE Sbjct: 121 GKDETENVEVRRWGDEYLPTLQVLPHWEIGEKLGILDFERAVKVAQSRFVNLVGLGAALE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEV 234 RAL FM+D E GY EV P+L+ ++ GTGQ+PKF + C+ D WL PT+EV Sbjct: 181 RALINFMLDRQI-EAGYLEVMPPILINSTSLQGTGQLPKFSEESFKCSEDELWLAPTAEV 239 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNLY EII+ LP++ P FR EAGS GRDT+G++R HQF K ELV I + Sbjct: 240 PVTNLYRDEIIDLDQLPIKHCAYTPCFRREAGSYGRDTKGLIRLHQFNKVELVKIVPPDT 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S EH+ ++S AE IL+ L L YRV+ LCTGDLGF A K YDLEVWL N YREISSCS Sbjct: 300 SEAEHQALVSDAEAILQALKLPYRVIELCTGDLGFGAAKCYDLEVWLPSSNTYREISSCS 359 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR N R+++ K ++ HTLNGSG+A+GR + AILENY ADG+V +P VL+ Sbjct: 360 NFRDFQARRANIRFKEKGKKGTQYVHTLNGSGLAIGRTMSAILENYQQADGTVKVPEVLQ 419 Query: 415 PYMNNLAVIKK 425 PY+ VI K Sbjct: 420 PYLK-REVIGK 429 >gi|76801495|ref|YP_326503.1| seryl-tRNA synthetase [Natronomonas pharaonis DSM 2160] gi|76557360|emb|CAI48937.1| serine--tRNA ligase [Natronomonas pharaonis DSM 2160] Length = 456 Score = 401 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 174/443 (39%), Positives = 258/443 (58%), Gaps = 20/443 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML Q++R+NPE + AL + ++ + IL +DE+ R L + +D+R +RN S++IG+ Sbjct: 1 MLSRQFVRENPEEVRRALDTKGVDVDLDRILDIDEEWRELKAEGDDLRRQRNEVSSEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + LKE++ +E E+ S L+ + +PNVP + P+G + Sbjct: 61 LKRDGEEEAAAEAIERSQELKEEIEAVEDRADELESELEAALLRLPNVPHPDAPVGDDES 120 Query: 121 ENILIRSVGK--KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ I G + S H+++GE L ++DF+R K+SG F G A LE AL Sbjct: 121 DNVEIDRWGFDDRRSLPDEVVPHYDLGEELDILDFERGAKVSGGGFYFAKGEGARLEHAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLI 229 QFM+D+H EHGYT+V PL V +M GTGQ PKF +D + D WL+ Sbjct: 181 VQFMLDVHRDEHGYTDVFPPLPVNSASMRGTGQFPKFVEDAYRIGGDNDDPYDDDDLWLL 240 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+Y EI+ LPL+ +P+FR EAG G +TRG++R HQF K E+V+ Sbjct: 241 PTAEVPVTNMYRDEILLDDDLPLKQQAYSPNFRREAGEHGTETRGIVRVHQFNKVEMVNF 300 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ----- 344 R E+S+ E +L A ++L+RL L YRV+ +CTGD+GF+ K YD+EVW G Sbjct: 301 VRPENSYDRLEGLLGEATDVLERLGLPYRVLEMCTGDMGFTQAKKYDVEVWAPGDDMEDG 360 Query: 345 ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + E+SS S +FQ+RR + +YR +S ++ HTLN SG+AV R ++AILE Y Sbjct: 361 PDVGGRWLEVSSVSNFEDFQARRAHIQYRPEQHESAEYIHTLNASGLAVPRVVVAILEYY 420 Query: 401 LNADGSVTIPTVLRPYMNNLAVI 423 N DG+V +P L+PYM VI Sbjct: 421 QNDDGTVDVPEPLQPYMGGTDVI 443 >gi|332637146|ref|ZP_08416009.1| seryl-tRNA synthetase [Weissella cibaria KACC 11862] Length = 427 Score = 401 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 193/432 (44%), Positives = 273/432 (63%), Gaps = 8/432 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR E + L R ++ + + +++ D K R L+ + E+++ARRN+ S +IG Sbjct: 1 MLDMKLIRNETESVKERLATRGVDAAEVDALVADDAKRRELLVQTEELKARRNTVSDEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + N + E T+ ++ L++E +V +++ + PN+P +P+G Sbjct: 61 --LKKRNKEDASDVIAEMQTVSAKIKELDEEVAKVDEAIQDRMLHFPNLPNPTIPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N R G+ PS + H+EIGE LG++D++R K++GARF G A LERA+ Sbjct: 119 EANREERVWGEIPSFDFKPKAHYEIGEDLGILDWERGAKVAGARFVYYVGQGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLT 237 FM+D H + GY E+ P +V+D AM+GTGQ PKF +D + T + LIPT+EV LT Sbjct: 179 NFMLDEH-QKEGYKEMITPYMVKDAAMFGTGQYPKFMEDAYRVGTNEDMTLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + E+I++ LP T ++PSFR EAGSAGRDTRG++R HQF K E+V T+ E S+ Sbjct: 238 NYFREEVIDADKLPYSVTAVSPSFRQEAGSAGRDTRGLIRMHQFNKVEMVKFTKPEQSYQ 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M + AE IL++L+L Y V++L TGD+GFSA KTYDLEVW+ Q++YREISS S Sbjct: 298 ALEDMTANAENILQKLNLPYHVITLSTGDMGFSAAKTYDLEVWMPEQDIYREISSVSNTE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR +YRD K L+F HTLNGSG+AVGR + AILENY NADG+VTIP VLRPY Sbjct: 358 AFQARRARIQYRDEEGK-LQFVHTLNGSGLAVGRTVAAILENYQNADGTVTIPEVLRPYF 416 Query: 418 NNLAVIKKEHIL 429 I E L Sbjct: 417 -GADKIVPEDTL 427 >gi|302037512|ref|YP_003797834.1| seryl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300605576|emb|CBK41909.1| Seryl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 428 Score = 401 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 198/429 (46%), Positives = 267/429 (62%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ +R N + L L R + + +L E R ++E++R + S + + Sbjct: 1 MYDLRVLRDNLDQLRDQLGARGKDVAWADLRTLTEDRRTRTIRVEELRHQLKKGSDDVAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + D L E + I E++ V L + IPN+P VP G Sbjct: 61 LKREKQPA--DEAMAAMKALGETIKIHEEQLRVVEEQLAHIALRIPNLPHTSVPDGRDEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI +R G P ++ H+++GEALG++DFDRA +++ ARF+VLTG A LERAL Sbjct: 119 DNIEVRRWGTPPQLSAPAQSHWDLGEALGILDFDRAVRMAKARFAVLTGSGARLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTNL 239 +M+D+HT+ HGY EV PLLV AM GTGQ+PKF DD+F D +LIPT+EV +TNL Sbjct: 179 YMLDMHTTRHGYREVLPPLLVNRTAMTGTGQLPKFEDDLFQLRDEELFLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ +SLP+R+T P FR EAGS G+DTRG++R HQF K ELV+ R E S+ E Sbjct: 239 HREEIMAEESLPIRYTAYTPCFRREAGSYGKDTRGLIRLHQFNKVELVAFARPEQSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ER+ S AE IL+ L LHYRV++LC GD+GFSA KTYD+EVWL Q +REISSCS F Sbjct: 299 ERLTSHAEAILQGLGLHYRVITLCKGDMGFSAAKTYDIEVWLPSQQTFREISSCSNFEAF 358 Query: 360 QSRRMNSRYRDPNSK---SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 Q+RR N R R K +F HTLNGSG+AVGR L+AILENY DG+VT+PT L+PY Sbjct: 359 QARRANIRCRAKAGKKDNKPEFVHTLNGSGLAVGRTLVAILENYQQPDGTVTVPTALQPY 418 Query: 417 MNNLAVIKK 425 M + I++ Sbjct: 419 MGGMRTIER 427 >gi|303257971|ref|ZP_07343980.1| serine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|331000048|ref|ZP_08323743.1| serine--tRNA ligase [Parasutterella excrementihominis YIT 11859] gi|302859314|gb|EFL82396.1| serine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|329572932|gb|EGG54552.1| serine--tRNA ligase [Parasutterella excrementihominis YIT 11859] Length = 433 Score = 401 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 193/435 (44%), Positives = 269/435 (61%), Gaps = 12/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R+N + L R + +E +L+ + + + + E+++ARRN + + Sbjct: 1 MLDSNLLRKNLPEVVARLATRKFQFPTEKYEALEGERKAIQTETEELQARRNQVAKK--I 58 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ L E + + E L LE + V +L L+ IPN+P VP+G Sbjct: 59 GAAKKAGQDATELLKEGAAIAEGLAALEGKNAAVKKALNDLLLTIPNLPDPSVPVGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DFD KL+G RF + G +A L RAL Q Sbjct: 119 ENVEVRRWGTPREFDFEIKDHVDVGGPLG-LDFDVGAKLAGTRFCFMKGQVARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--------MFCTTDGRWLIPTS 232 FM+D HT E+GYTE P + E + GTGQ+PKF +D + +LIPTS Sbjct: 178 FMLDTHTQENGYTECYTPYIANQETLIGTGQLPKFEEDLFAAKKGGQEGEGEIFYLIPTS 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV+LTN ++++ LP++ T P FRSEAGS G+DTRGM+RQHQF K E+V I + Sbjct: 238 EVTLTNSVRGQMLKESDLPIKITAQTPCFRSEAGSYGKDTRGMIRQHQFEKVEMVRIVKP 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S+ E M+ CAE IL++L L YRV++LCTGD+GF + KTYDLEVW+ QN YREISS Sbjct: 298 EESYKHLEEMVVCAEGILQKLGLPYRVITLCTGDMGFGSAKTYDLEVWIPAQNTYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C FQ+RRM +R+++ K ++ HTLNGSG+AVGR L+A+LENY NADGSVT+P V Sbjct: 358 VSNCEAFQARRMQTRFKNAQGK-TEYVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEV 416 Query: 413 LRPYMNNLAVIKKEH 427 LRPYMN LAV+K E+ Sbjct: 417 LRPYMNGLAVLKPEN 431 >gi|229553320|ref|ZP_04442045.1| serine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|229313406|gb|EEN79379.1| serine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] Length = 427 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 184/431 (42%), Positives = 269/431 (62%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQ PE L R ++ + + +++LDEK R + + E+++A+RN S QI Sbjct: 1 MLDLKLIRQKPEWAKKKLAARAIKGEEIDELIALDEKRRKVTVQTEELKAKRNEVSGQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + +++ L+KE E+ + ++ +PN P ++VP+ + Sbjct: 61 VMKR--NKENADEQIAAMREVGQKISQLDKELAELNEKVTYILVRLPNFPADDVPMSLNE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +++ G P + H++IGE LG++DF+RA K+SG+RF G A LERA+ Sbjct: 119 DDSREEYKWGNIPHFDFQPKHHWDIGEKLGILDFERAAKVSGSRFVYYKGAGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSL 236 F +D H + GY E+ P LV +++M+GTGQ PKF D + T+ +IPT+EV L Sbjct: 179 NFFLDEH-QKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTITNDGEPLTMIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y +I+++ LP+ FT L P+FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 238 VNYYRGDIMDAAKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + ++ AE++L++L L Y V++L + D F++ KT DLEVW Q+ YREISSCS C Sbjct: 298 KELKNLIHDAEDLLRKLGLPYHVITLASNDASFTSAKTNDLEVWFPAQDRYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD + K L+F HTLNGSG+AVGR + AILENY ADG+V IP VL PY Sbjct: 358 TDFQARRAQIRYRDDDGK-LQFVHTLNGSGLAVGRTVAAILENYQQADGTVKIPDVLVPY 416 Query: 417 MNNLAVIKKEH 427 M+ IK+E Sbjct: 417 MHGQTAIKQED 427 >gi|86604971|ref|YP_473734.1| seryl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] gi|123507911|sp|Q2JXL1|SYS_SYNJA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|86553513|gb|ABC98471.1| seryl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] Length = 435 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 196/421 (46%), Positives = 261/421 (61%), Gaps = 5/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ +R PE + AL KR + IL LD K R L + ++A NS ++G+ Sbjct: 1 MLDLKLLRDRPEEVRQALNKRGAVADLDRILELDGKRRQLETRRVALQAESNSLGKKVGE 60 Query: 61 AIAEGNL---SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I +G + V AL+ + + LK ++ LE+ E E+ ++ L+ +PN+PL VP+G Sbjct: 61 LIRQGADPQGAEVTALRQQGADLKAEIAQLEQRERELEEEMQTLLLTLPNLPLPSVPVGQ 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 EN+ +R G H H E+ E LGL++ RA K++ +RF + G A LERA Sbjct: 121 DETENVEVRRWGDALKPTHPVLPHDEVAEKLGLLEVGRAVKVAQSRFVAMVGAGAALERA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSL 236 L M++ H GYTEV P LV A+ GTGQ+PKFA + C D WLIPT+EV L Sbjct: 181 LIAMMLERHI-AAGYTEVIPPFLVNSAALEGTGQLPKFAAESFRCADDDLWLIPTAEVPL 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY E+I ++ LPL F P FR EAGS GRDT+G++R HQF K ELV +T S Sbjct: 240 TNLYREEVIPAERLPLYFCAYTPCFRREAGSYGRDTKGLIRLHQFQKVELVKVTHPTQSE 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHE+++ AE IL+ L+L YRVV LCTGDLGFSA + +DLEVW QN YREISSCS C Sbjct: 300 AEHEKLVQDAEAILQMLELPYRVVELCTGDLGFSAARCFDLEVWFPSQNRYREISSCSNC 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ K F HTLNGSG+AVGR L A+LEN+ DGS+ IP LRP+ Sbjct: 360 WDFQARRANLRYKEAGQKGTHFVHTLNGSGLAVGRALAALLENHQQPDGSIRIPQALRPF 419 Query: 417 M 417 + Sbjct: 420 L 420 >gi|162446896|ref|YP_001620028.1| seryl-tRNA synthetase [Acholeplasma laidlawii PG-8A] gi|189083556|sp|A9NE72|SYS_ACHLI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|161985003|gb|ABX80652.1| seryl-tRNA synthetase [Acholeplasma laidlawii PG-8A] Length = 423 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 190/426 (44%), Positives = 274/426 (64%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD+++I +N + + + L R + ++ L E+ + +IK++ED++A+RN S +IG Sbjct: 1 MLDLKYITENIDEVILKLNTRGGDFSHLRQLIDLQEERKSVIKEVEDLKAKRNEYSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + + ++K +P LE + E+ + K + +PN+P ++VP+G Sbjct: 61 ELKRQKQ--DASHVLLKVESIKSDIPALELKLGEIDEKINKELIVLPNIPADDVPVGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + NI I+ G ++H ++GEAL ++DF+RATK++G RF V G A LERAL Sbjct: 119 SANIEIKKWGTIRHFDFEVKDHTQLGEALNILDFERATKITGPRFVVDKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FMID H HGYTE+ P +V D++MY TGQ PKF +D F W PT+EV N Sbjct: 179 NFMIDTHAYTHGYTEIIPPFIVNDKSMYATGQFPKFKEDAFKLEGFDWYLNPTAEVPTIN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EII++ +LP+++ +FRSEAGSAGRDT+G+LRQHQF K EL+ R EDS Sbjct: 239 LFRDEIIDNDALPIQYVAYTTAFRSEAGSAGRDTKGILRQHQFNKVELIKFARPEDSEQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ ML+ +E IL+ L++ YRVV L TGD+GF KTYD+EVWL GQN+YREI S S + Sbjct: 299 HQDMLANSERILQLLNIPYRVVVLSTGDMGFGMSKTYDIEVWLPGQNMYREIGSISNARD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ ++ HTLNGSG+AVGR +IA+LENY N DGS+TIP VL+PYM Sbjct: 359 FQARRANIRFKRSKDAKTEYVHTLNGSGLAVGRTMIAVLENYQNQDGSITIPEVLKPYM- 417 Query: 419 NLAVIK 424 + VIK Sbjct: 418 GVEVIK 423 >gi|258540068|ref|YP_003174567.1| seryl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] gi|257151744|emb|CAR90716.1| Seryl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] Length = 427 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 183/431 (42%), Positives = 269/431 (62%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQ PE L R ++ + + +++LDEK R + + E+++A+RN S QI Sbjct: 1 MLDLKLIRQKPEWAKKKLAARAIKGEEIDELIALDEKRRKVTVQTEELKAKRNEVSGQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + +++ L+KE E+ + ++ +PN P ++VP+ + Sbjct: 61 VMKR--NKENADEQIAAMREVGQKISQLDKELAELNEKVTYILVRLPNFPADDVPMSLNE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +++ G P + H++IGE LG++DF+RA K+SG+RF G A LERA+ Sbjct: 119 DDSREEYKWGNIPHFDFQPKHHWDIGEKLGILDFERAAKVSGSRFVYYKGAGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSL 236 F +D H + GY E+ P LV +++M+GTGQ PKF D + T+ +IPT+EV L Sbjct: 179 NFFLDEH-QKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTITNDGEPLTMIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y +I+++ LP+ FT L P+FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 238 VNYYRGDIMDAAKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + ++ AE++L++L L + V++L + D F++ KT DLEVW Q+ YREISSCS C Sbjct: 298 KELKNLIHDAEDLLRKLGLPHHVITLASNDASFTSAKTNDLEVWFPAQDRYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD + K L+F HTLNGSG+AVGR + AILENY ADG+V IP VL PY Sbjct: 358 TDFQARRAQIRYRDDDGK-LQFVHTLNGSGLAVGRTVAAILENYQQADGTVKIPDVLVPY 416 Query: 417 MNNLAVIKKEH 427 M+ IK+E Sbjct: 417 MHGQTAIKQED 427 >gi|166364046|ref|YP_001656319.1| seryl-tRNA synthetase [Microcystis aeruginosa NIES-843] gi|189083574|sp|B0JTT9|SYS_MICAN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166086419|dbj|BAG01127.1| seryl-tRNA synthetase [Microcystis aeruginosa NIES-843] Length = 427 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 189/428 (44%), Positives = 264/428 (61%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR+NPE + L R IL L+++ + L + ++ R N +GQ Sbjct: 1 MLDLKQIRENPEEVQKRLDSRGGSYDIAPILQLNQQQKALELERSSLQGRGNEIGKLVGQ 60 Query: 61 AIAEGNLS---LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + G+ + + LK E + +K +L LE +E + +++ + I +PN+P E PIG Sbjct: 61 KVKSGSDANSPEILVLKTEGNEIKSKLAQLEPQEKAIKAAIDQKILDLPNLPSETTPIGK 120 Query: 118 SANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 EN+ +R + H+EIGE LG++DF+RA K++ +RF L A LER Sbjct: 121 DERENVEVRRWGEEYKPTNPNILPHWEIGEKLGILDFERAVKIAQSRFVNLIALGAALER 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVS 235 AL FM+D H GYTEV P+L+ +++ GTGQ+PKFA++ F C D WL PT+EV Sbjct: 181 ALINFMLDRHI-VAGYTEVLPPILINSDSLRGTGQLPKFAEESFKCRDDELWLAPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLY EI+ S+ LP++ P FR EAGS G+DTRG++R HQF K E+V I + S Sbjct: 240 VTNLYRDEILSSEQLPIKHCAYTPCFRREAGSYGKDTRGLIRLHQFNKVEMVKIVHPDAS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EHE +++ AE IL+ L L YRV+ LC+GDLGFSA K YDLEVWL N YREISSCS Sbjct: 300 AQEHESLVANAEAILQALQLPYRVIELCSGDLGFSAAKCYDLEVWLPSANTYREISSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR N R+++ K F HTLNGSG+A+GR + AILENY DG+V +P VL+P Sbjct: 360 FRDFQARRANIRFKEKGQKGTNFVHTLNGSGLAIGRTMAAILENYQQPDGTVKVPEVLQP 419 Query: 416 YMNNLAVI 423 Y+ VI Sbjct: 420 YLK-REVI 426 >gi|108757304|ref|YP_630179.1| seryl-tRNA synthetase [Myxococcus xanthus DK 1622] gi|122981222|sp|Q1DAZ4|SYS_MYXXD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|108461184|gb|ABF86369.1| seryl-tRNA synthetase [Myxococcus xanthus DK 1622] Length = 426 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 204/427 (47%), Positives = 276/427 (64%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ + QN + + LK R L + R L +E + ARRN+ + ++ + Sbjct: 1 MLDLRNVAQNFDAVVARLKTRGGNLDLGPFQRLFAERRELYVSVESLAARRNAANEEM-K 59 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ + +DAL+ + + +++ E +V L +++ IPNVP E VP G A Sbjct: 60 RKAKEDPKALDALRGDLRAVSQEIKEKEARLKDVEEELNRILLLIPNVPHESVPEGGGAE 119 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+KP + ++HFE+GE LG++DF+RA K+SG+RF+ G LA LERAL Sbjct: 120 DNVQVSIWGQKPDLLFAPKQHFELGEKLGMLDFERAAKVSGSRFTFYKGALARLERALVT 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FMID+HT GYTE+ P LV E M GTGQ+PKF DD F T R+LIPT+EV +TN Sbjct: 180 FMIDVHT-SKGYTELLPPYLVLRETMMGTGQLPKFEDDAFKTLGEPERFLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+E +SLP+R+ +PSFR+EAG+AG+DTRG++RQHQF K ELV +E S E Sbjct: 239 YHADEILEGESLPIRYCAFSPSFRAEAGAAGKDTRGLIRQHQFHKVELVKFAHQEKSLDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M A +IL+RL +H+RV+ LCTGD+GF+A KTYD+EVWL GQN YREISSCS CG+ Sbjct: 299 LEAMTDDACDILRRLGIHHRVMLLCTGDMGFAARKTYDIEVWLPGQNSYREISSCSDCGD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR + HTLNGSG+AVGR IAILENY DGSV IP L PYM Sbjct: 359 FQARRAKIRYRAQRGDKPQLAHTLNGSGLAVGRTTIAILENYQREDGSVAIPEALVPYMG 418 Query: 419 NLAVIKK 425 L +K Sbjct: 419 GLKELKP 425 >gi|254477289|ref|ZP_05090675.1| seryl-tRNA synthetase [Ruegeria sp. R11] gi|214031532|gb|EEB72367.1| seryl-tRNA synthetase [Ruegeria sp. R11] Length = 430 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 200/429 (46%), Positives = 274/429 (63%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R S +L+LDE R I+ E+ +A +N + IG Sbjct: 1 MHDIRAIRENPAAFDAALARRGESALSSDVLALDEARRAKIQAAEEAQAEQNKAAKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + L+ + K ++ ++ E E+ + L +++ IPN P E+VP G + Sbjct: 61 AKAKGDNEEFERLRAAVAEKKAEVAAMQTEAKELDAKLTDMLARIPNNPAEDVPEGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G P +EHFEI MDF+ A K+SG+RF VL G +A + RAL Q Sbjct: 121 DNVEVNKWGTLPEFTFAPKEHFEIAGVAAAMDFETAAKISGSRFVVLKGAVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID H E+ EV++P+LVRDEAMYGT ++PKF DD + TT+G WL+PTSEV LT Sbjct: 181 FMIDTHVDENDLMEVNSPVLVRDEAMYGTDKLPKFGDDSYQTTNGWWLVPTSEVPLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + + ++ +LP+R T FRSEAGSAG+DT GMLRQHQF K E+VSI S E + Sbjct: 241 AGDTLDEAALPIRMTAHTLCFRSEAGSAGKDTSGMLRQHQFEKVEMVSIVHPSQSDDEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE +L++L + YR V LCTGD+GF A +T+D+E W+ GQN YREISS ST G+FQ Sbjct: 301 RMLRCAEGLLEKLGIPYRTVILCTGDMGFGARRTFDIEAWVPGQNTYREISSVSTTGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R++ +F HTLNGSG+AVGRCLIA+LEN DGSV +P L PY+ Sbjct: 361 ARRMNARFKPAEGGKPEFVHTLNGSGLAVGRCLIAVLENGQQEDGSVKLPEALAPYLGGK 420 Query: 421 AVIKKEHIL 429 + + L Sbjct: 421 LTLSADGKL 429 >gi|158335226|ref|YP_001516398.1| seryl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|189083555|sp|B0BYR8|SYS_ACAM1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|158305467|gb|ABW27084.1| seryl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 424 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 188/421 (44%), Positives = 262/421 (62%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +R+NPE L +R + + IL LD+K R L + ++AR N IG+ Sbjct: 1 MIDLKQLRENPEAFAECLSRRG-DYDLQAILDLDQKQRELETERSQLQARSNQIGKTIGE 59 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + G + L+ E ST+K L LE +E ++ + + +L+ IPN+P ++ P+G Sbjct: 60 RMKGGANPKDPEIQNLRQEGSTVKATLSDLEPKERDLKAEIGELLLTIPNLPSDDTPVGK 119 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+ + G + + H+EIGE LG+++F+R+ K++ +RF+ L G A LERA Sbjct: 120 DETANVEVSRWGDEYIPKNAKLAHWEIGENLGILNFERSVKVAQSRFATLVGAGAALERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L QFM+D E GY EV P+LV +++ TGQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LIQFMLDQQV-EAGYVEVLPPVLVNSDSLTATGQLPKFAEESFKCAEDDLWLSPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EII + LP+ P FR EAGS GRDTRG++R HQF K ELV + S Sbjct: 239 TNLYRDEIINADDLPIFHCAYTPCFRREAGSYGRDTRGLIRLHQFNKVELVKLVHPSTSA 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHE ++ A IL+ L L YRV+ LCTGDLGFSA K YDLEVWL + YREISSCS Sbjct: 299 AEHEALVKNAAAILEALKLPYRVLQLCTGDLGFSAAKCYDLEVWLPSADCYREISSCSNF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N R+++ K +F HTLNGSG+AVGR + A+LENY DGSV +P VL+PY Sbjct: 359 LDFQARRGNIRFKESGQKGTQFVHTLNGSGLAVGRTMAAVLENYQQPDGSVQVPDVLQPY 418 Query: 417 M 417 + Sbjct: 419 L 419 >gi|283853860|ref|ZP_06371077.1| seryl-tRNA synthetase [Desulfovibrio sp. FW1012B] gi|283570757|gb|EFC18800.1| seryl-tRNA synthetase [Desulfovibrio sp. FW1012B] Length = 435 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 192/428 (44%), Positives = 275/428 (64%), Gaps = 3/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++++RQNP+ + L +R + L+L+E+ R I ++E + +RN+ SA++ + Sbjct: 1 MLDMKFLRQNPQAVADGLARRRFPFDLDAFLALEERRRETITEVERKKGQRNAASAEVAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + L E + L+++ +V +++ +L+ +PN+P P G + N Sbjct: 61 IKRQGG--DAAHVLAGLGALSEDIKALDEKTRDVDAAVTELLLGVPNIPHATTPDGANEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR VG + + EH ++G LG +DF+RA KLSGARF VL G LA LERAL Sbjct: 119 DNVEIRRVGVPRALDFPAMEHQDVGTGLGGLDFERAAKLSGARFVVLRGGLARLERALAA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNL 239 FM+D HT HGYTEV+ P +V E++ GTGQ+PKFA+D+F +LIPT+EV +TNL Sbjct: 179 FMLDTHTLGHGYTEVATPYIVNAESLTGTGQLPKFAEDLFKLDGQAAYLIPTAEVPVTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + E++ +LPL +T FRSEAGS G+DT+G++R HQF K ELV + + S+ E Sbjct: 239 HRGEVLPEAALPLAYTCHTQCFRSEAGSYGKDTKGLIRLHQFGKVELVRLVHPDTSYQEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + AE IL+ L L YRVV+LC GDLGFS+ KTYDLEVWL GQ+ YREISSCS +F Sbjct: 299 EVLTGHAEAILQALGLPYRVVALCAGDLGFSSAKTYDLEVWLPGQDKYREISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR + R++ K HTLNGSG+A+GR + AILENY+ DGSV +P VL P+M Sbjct: 359 QARRADIRFKPEGGKKTALVHTLNGSGLAIGRTMAAILENYVRKDGSVVVPPVLVPFMGG 418 Query: 420 LAVIKKEH 427 V++ E Sbjct: 419 TEVLEPEG 426 >gi|24414814|emb|CAD55627.1| serine-tRNA ligase [Synechococcus elongatus PCC 7942] Length = 438 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 191/418 (45%), Positives = 262/418 (62%), Gaps = 5/418 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD++ +R+NPE L +RH + +LSLD++ R ++ ++AR N +GQ Sbjct: 17 LDLRLLRENPEATQARLDRRHSSYDIQPLLSLDQQVRQWEQERTQLQARSNEIGRSVGQK 76 Query: 62 IAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + EG + AL+ E + LK+Q+ LE++E +V S L + +PN+P E VP+G+S Sbjct: 77 MREGADPQSEEIAALREEGNQLKQQIADLEQQERQVRSELDTYLLTLPNLPDETVPLGSS 136 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +EN I G H+EIGE LGL DF+R+T+++ +RF L G A LERAL Sbjct: 137 EDENREIHRWGDDRIREGEFAPHWEIGERLGLFDFERSTRIAQSRFVTLLGAGAALERAL 196 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLT 237 FM+D T GYTEV+ P L+ ++ +GQ+PKF + C D WL PT+EV LT Sbjct: 197 IAFMLDRQT-AAGYTEVAPPYLINSASLTASGQLPKFSEESFRCDRDDLWLTPTAEVPLT 255 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +LY EI+ + LPLR+ P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 256 SLYRDEILSADQLPLRYCAYTPCFRREAGSYGRDTRGLIRLHQFNKVELYQFVHPDHSEA 315 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H+++L+ AE IL+ L+L YR + LCTGDLGFSA KTYD+EVWL YREISSCS CG Sbjct: 316 AHQQLLANAEAILQALELPYRTIELCTGDLGFSAQKTYDIEVWLPSAGRYREISSCSNCG 375 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR N R+++ K +F HTLNGSG+AVGR + A+LENY DGSV +P L+P Sbjct: 376 DFQARRANIRFKEAGQKGTRFVHTLNGSGLAVGRTMAAVLENYQQPDGSVRVPEALQP 433 >gi|239629757|ref|ZP_04672788.1| seryl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527369|gb|EEQ66370.1| seryl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 427 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 182/431 (42%), Positives = 271/431 (62%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQ PE L R ++ + + +L+LD + R + + E+++A+RN S QI Sbjct: 1 MLDLKLIRQKPEWAKEKLAARAIKGEEIDELLALDTRRRQVTVQTEELKAKRNDVSGQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + + +++ L+KE ++ + ++ +PN P ++VP+ + Sbjct: 61 VMKR--NKENADDQIKDMREVGQKIAALDKELAQLNEKVTYILVRLPNFPADDVPMSLNE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +++ G P+ + H++IGE LG++DF+RA K++G+RF G A LERA+ Sbjct: 119 DDSREEYKWGNMPTFDFEPKHHWDIGEKLGILDFERAAKVAGSRFVYYKGAGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSL 236 F +D H + GY E+ P LV +++M+GTGQ PKF D + T+ LIPT+EV L Sbjct: 179 NFFLDEH-QKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTITNDGEPLTLIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y ++II+++ LP+ FT L P+FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 238 VNYYRNDIIDAEKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + + ++ AE++L++L L Y V++L + D F++ KT DLEVW+ Q+ YREISSCS C Sbjct: 298 KQLQNLIHDAEDLLQKLGLPYHVITLASNDASFTSAKTNDLEVWMPAQDRYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD + K L+F HTLNGSG+AVGR + +ILENY ADGSV IP VL PY Sbjct: 358 TDFQARRAQIRYRDDDGK-LQFVHTLNGSGLAVGRTVASILENYQQADGSVKIPDVLVPY 416 Query: 417 MNNLAVIKKEH 427 M I KE Sbjct: 417 MQGQTTITKED 427 >gi|119503245|ref|ZP_01625329.1| seryl-tRNA synthetase [marine gamma proteobacterium HTCC2080] gi|119460891|gb|EAW41982.1| seryl-tRNA synthetase [marine gamma proteobacterium HTCC2080] Length = 434 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 188/432 (43%), Positives = 262/432 (60%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +R++P + ALK + E ++ L LD + + + + + A R S S +IG+ Sbjct: 1 MLDIKVVREDPTAIAAALKLKGYEFPVDHFLELDARRKQADIRAQGLLADRKSASKKIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQL----PILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + +G V+ K E + L E++ I +E + +L L+ PN P VP G Sbjct: 61 LVGQGRS--VEEAKAEVAELLEKISGDITIATEEARQAQEALHDLLLATPNAPDARVPAG 118 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +N + + G+ + +H +IGE G +D A K++G+RF+V++G LA L R Sbjct: 119 ATEEDNHEVLTWGEPKAFDFEPLDHVDIGELSGQLDAGTAGKITGSRFTVMSGALARLHR 178 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEV 234 AL QFM++ H HGYTE+ P +V E++ GTGQ+PKF +D+F +LIPT+EV Sbjct: 179 ALVQFMLNEHIVVHGYTEIYVPYIVNRESLIGTGQLPKFEEDLFRIQGDQDYYLIPTAEV 238 Query: 235 SLTNL---YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +TN+ E E L +R+ P FRSEAGS GRDTRG++RQHQF K ELV + R Sbjct: 239 PVTNIARDRIFEDQEFGELGIRYVAHTPCFRSEAGSYGRDTRGLIRQHQFEKVELVQLVR 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 S E + + AE IL+ L+L YR V LC GDLGF A TYDLEVWL GQ+ YREIS Sbjct: 299 PSQSDEALESLTAHAEHILRSLELPYRKVILCGGDLGFGAQLTYDLEVWLPGQDAYREIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS G +Q+RRM +R+R+P + + HT+NGSG+AVGR L+AILENY A G V IP Sbjct: 359 SCSNYGAYQARRMQARWRNPATGKPEPLHTINGSGLAVGRTLVAILENYQEAGGDVLIPE 418 Query: 412 VLRPYMNNLAVI 423 VLRPYM+ L I Sbjct: 419 VLRPYMHGLERI 430 >gi|319778381|ref|YP_004129294.1| Seryl-tRNA synthetase [Taylorella equigenitalis MCE9] gi|317108405|gb|ADU91151.1| Seryl-tRNA synthetase [Taylorella equigenitalis MCE9] Length = 459 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 188/458 (41%), Positives = 268/458 (58%), Gaps = 44/458 (9%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI +R++ + L +R ++ L+++ + + + E ++A RN + QIGQ Sbjct: 1 MLDIALLRKDLNFVKAQLARRGVDFDEARFQQLEDERKSVQVETEQLQASRNGIAKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A ++G L + + + EQL LE + + + +SL+ ++ IPN+P VP G Sbjct: 61 AKSKG--EDASDLMRQAAQIPEQLKQLEGKLNGIKASLETMLHGIPNLPHASVPDGDDEG 118 Query: 121 ENILIRSVGKKPSAI----------HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 N+ I+ + ++H +GE LG +DFD A KL+G+RFS + G Sbjct: 119 GNVEIKRWIPGSGYVDASVDVKPLGFEVKDHVTLGEPLG-LDFDCAIKLTGSRFSFMKGA 177 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------- 223 +A + RAL QFM++ HTSEHGYTE P +V ++GTGQ+PKF +DMF Sbjct: 178 VARMHRALAQFMLNTHTSEHGYTECYTPYIVNSSTLFGTGQLPKFKEDMFWVIKGGEGLD 237 Query: 224 -----------------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 + +LI TSE++LT + I+ LP+R T +P Sbjct: 238 PEAKTDSEDSSLGASGATTSEQKEDLYLISTSEITLTGTVKNSIVVETELPIRLTAHSPC 297 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 FRSEAGS GRDTRG++RQHQF K E+V I E S+ E ML AE+IL+ L L YRVV Sbjct: 298 FRSEAGSGGRDTRGIIRQHQFDKVEMVQIAHPEKSYEALEEMLGHAEKILQALALPYRVV 357 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH 380 LCTGD+GFSA KTYDLEVW+ QN +REISS S C FQ+RR+ +R+++ + K+ ++ H Sbjct: 358 QLCTGDMGFSAAKTYDLEVWVPSQNTFREISSVSNCEAFQARRLQARFKNSSGKN-EYVH 416 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 TLNGSGVAVGR L+A++ENY DGS+ +P VLRPYM Sbjct: 417 TLNGSGVAVGRALVAVMENYQQHDGSIIVPEVLRPYMG 454 >gi|199598496|ref|ZP_03211914.1| Seryl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|258508888|ref|YP_003171639.1| seryl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|199590680|gb|EDY98768.1| Seryl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|257148815|emb|CAR87788.1| Seryl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|259650182|dbj|BAI42344.1| seryl-tRNA synthetase [Lactobacillus rhamnosus GG] Length = 427 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 186/431 (43%), Positives = 269/431 (62%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQ PE L R ++ + + +++LDEK R + + E+++A+RN S QI Sbjct: 1 MLDLKLIRQKPEWAKKKLAARTIKGEEIDELIALDEKRRKVTVQTEELKAKRNEVSGQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + +++ L+KE E+ + ++ +PN P ++VP+ + Sbjct: 61 VMKR--NKENADEQITAMREVGQKISQLDKELAELNEKVTYILVRLPNFPADDVPMSLNE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +++ G P + H++IGE LG++DF+RA K+SG+RF G A LERA+ Sbjct: 119 DDSREEYKWGNIPHFDFQPKHHWDIGEKLGILDFERAAKVSGSRFVYYKGAGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSL 236 F +D H + GY E+ P LV +++M+GTGQ PKF D + T+ +IPT+EV L Sbjct: 179 NFFLDEH-QKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTITNDGEPLTMIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y +II++ LP+ FT L P+FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 238 VNYYRGDIIDAAKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + ++ AE++L++L L Y V++L + D F++ KT DLEVW QN YREISSCS C Sbjct: 298 QELKNLIHDAEDLLRKLGLPYHVITLASNDASFTSAKTNDLEVWFPAQNRYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD + K L+F HTLNGSG+AVGR + AILENY ADG+V IP VL PY Sbjct: 358 TDFQARRAQIRYRDDDGK-LQFVHTLNGSGLAVGRTVAAILENYQQADGTVKIPDVLVPY 416 Query: 417 MNNLAVIKKEH 427 M+ IK+E Sbjct: 417 MHGQTAIKQED 427 >gi|218438799|ref|YP_002377128.1| seryl-tRNA synthetase [Cyanothece sp. PCC 7424] gi|226701389|sp|B7KCF5|SYS_CYAP7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|218171527|gb|ACK70260.1| seryl-tRNA synthetase [Cyanothece sp. PCC 7424] Length = 430 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 194/431 (45%), Positives = 263/431 (61%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IR+NPE + L +R + IL LDE+ R L ++ R N S I Sbjct: 1 MLDIKQIRENPELVQEKLNRRSAAKDYDLTPILQLDERQRELESSRVQLQTRGNEISKLI 60 Query: 59 GQAIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q I G + ALK E +T+K QL LE +E E+ + ++ L+ +PN+P + P+ Sbjct: 61 PQKIKGGSDPKGEEIKALKEEGNTVKNQLSSLEPQEKEIKAQIESLLLQLPNLPSDSTPL 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G EN+ IR G + H+EIGE LG++DF+RA K++ +RF L G A LE Sbjct: 121 GKDETENVEIRRWGDEYLPKIKVLPHWEIGEKLGILDFERAVKVAQSRFVNLIGAGAALE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEV 234 RAL FM+D E GY EV P+L+ ++ GTGQ+PKF + C+ D WL PT+EV Sbjct: 181 RALINFMLDRQI-EAGYLEVMPPILINTTSLQGTGQLPKFSEESFKCSEDELWLAPTAEV 239 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNLY +IE + LP++ P FR EAGS G+DTRG++R HQF K ELV + E Sbjct: 240 PVTNLYRDNVIEGEQLPIKHCAYTPCFRREAGSYGKDTRGLIRLHQFNKVELVKLVHPET 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S EHE ++ AE IL+ L L YRV+ LCTGDLGF A K YD+EVWL + YREISSCS Sbjct: 300 SEAEHEALVKDAEAILQALKLPYRVIELCTGDLGFGAAKCYDIEVWLPSSDTYREISSCS 359 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR N R+++ K ++ HTLNGSG+A+GR + AILENY DG++ +P VL+ Sbjct: 360 NFRDFQARRANIRFKEKGKKGTQYVHTLNGSGLAIGRTMSAILENYQQEDGTIKVPEVLQ 419 Query: 415 PYMNNLAVIKK 425 PY+ VI K Sbjct: 420 PYLK-REVIGK 429 >gi|75907945|ref|YP_322241.1| seryl-tRNA synthetase [Anabaena variabilis ATCC 29413] gi|123609900|sp|Q3MCE0|SYS_ANAVT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|75701670|gb|ABA21346.1| seryl-tRNA synthetase [Anabaena variabilis ATCC 29413] Length = 426 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 198/428 (46%), Positives = 269/428 (62%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+NP+ + L R + IL LD++ R L I+AR N +GQ Sbjct: 1 MLDIKQIRENPQLIQERLNSRSGTYDIQPILQLDKQQRELEATRSQIQARSNEIGKIVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + AL++E +++K QL LE E E+ + +++LI +PN+P + PIG Sbjct: 61 KIKSGINPQDPEIQALRDEGNSIKAQLSELEPREKELKAEIEQLILALPNLPSDSTPIGK 120 Query: 118 SANENILIRSVGKKP-SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 S EN+ +R G + H+EIGE LG+++F+RA K++ +RF L G A LER Sbjct: 121 SEEENVEVRRWGDEYLPQNPNIIPHWEIGEKLGILNFERAVKVAQSRFVNLIGAGAALER 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVS 235 AL FM+ T GY EVS PLLV +++ GTGQ+PKFA++ F C D WLIPT+EV Sbjct: 181 ALINFMLKTQT-VAGYVEVSPPLLVNTDSLTGTGQLPKFAEESFKCADDELWLIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLY EI+ +++LP+ P FR EAGS GRD RG++R HQF K ELV + S Sbjct: 240 VTNLYRGEILAAENLPIYHCAYTPCFRREAGSYGRDMRGLIRLHQFNKVELVKVVHPSTS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 F E E+++ AE IL+ L L YRV++LCTGDLGF A KTYDLEVWL YREISSCS Sbjct: 300 FDELEKLVGNAEAILQALKLPYRVINLCTGDLGFGATKTYDLEVWLPSSGKYREISSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +FQ+RR + R+++ K +F HTLNGSG+AVGR + AILENY DG++ IP VL+ Sbjct: 360 CFDFQARRADIRFKEAGKKGTQFVHTLNGSGLAVGRTMAAILENYQQPDGTILIPEVLQV 419 Query: 416 YMNNLAVI 423 Y+ V+ Sbjct: 420 YL-GREVL 426 >gi|313473046|ref|ZP_07813533.1| serine--tRNA ligase [Lactobacillus jensenii 1153] gi|313448839|gb|EEQ67733.2| serine--tRNA ligase [Lactobacillus jensenii 1153] Length = 423 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 185/424 (43%), Positives = 259/424 (61%), Gaps = 13/424 (3%) Query: 15 DIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 L R ++P+ + ++++DEK R + + E ++A+RN S +I N D Sbjct: 3 KEKLATRGIKPEELDEVVAIDEKRRAKLSETEALKAKRNEVSKEIAAKKR--NKENADDA 60 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 + EQ+ L++E E+ ++ +PN P + PIG + N +R + Sbjct: 61 IKAMREVGEQIKKLDEEVAELTEKQNYILLRLPNFPDDSDPIGPDESYNQEVRKWNEPTK 120 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 + H+++G+ L ++DFD A K+SGARF G A LERA+ F +D +T E GYT Sbjct: 121 FNFEPKAHWDLGDDLHILDFDTAAKVSGARFVYYKGAGALLERAVYNFFLDENTKE-GYT 179 Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------RWLIPTSEVSLTNLYSHEII 245 EV P LV D++M GTGQ PKF +D++ D LIPT+EV L N + +I+ Sbjct: 180 EVIPPYLVNDDSMQGTGQFPKFTEDVYTIVDNDDPDKPLNLTLIPTAEVPLVNYFRGDIV 239 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + K LP+ T L P+FRSEAGSAGRDTRG++R HQF K E+V + + E+S+ E +R+ Sbjct: 240 DGKKLPINVTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKVCKPEESWNELDRLTHN 299 Query: 306 AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMN 365 AE +L++L L Y VV+L TGD F++ KTYDLEVW+ QN YREISSCS C +FQ+RR Sbjct: 300 AEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQNKYREISSCSNCTDFQARRAQ 359 Query: 366 SRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 RYRD + K +K HTLNGSG+AVGR + AILENY N DGSVT+P VL PYM+ + I K Sbjct: 360 IRYRDEDGK-VKLVHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEVLVPYMHGMTKITK 418 Query: 426 EHIL 429 E L Sbjct: 419 EDTL 422 >gi|222150263|ref|YP_002559416.1| seryl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] gi|254783034|sp|B9E909|SYS_MACCJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|222119385|dbj|BAH16720.1| seryl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] Length = 423 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 186/426 (43%), Positives = 262/426 (61%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R PE + L+ R ++ + IL LD R L + E+++A+RN S +I Sbjct: 1 MLDIKLFRTEPEFVKKKLEMRAIDTSIVDEILELDIAARELTARTEELKAKRNKTSEEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q N D + E++ ++ E +EV +LK + +PN+ +E P G Sbjct: 61 QKKR--NKENADDAIKAMREVGEEIKRIDTELNEVSQTLKDKLVRLPNLVSDETPFGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ ++ G + ++ H++I E L + DF+RA K+SGARF+ LT A LERAL Sbjct: 119 DENVEVKKWGTPRTFDFEAKAHWDIVENLKMADFERAAKVSGARFAFLTKDGARLERALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FM+D H +GY E+ P LV +M+GTGQ+PKF +D+F + IPTSEV LTN Sbjct: 179 NFMLDTH-RANGYEEMVTPQLVNAASMFGTGQLPKFEEDLFKVEKEGLYTIPTSEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y EI+ + LP +FT + FRSEAGSAGRDTRG++R HQF K E+V R EDS+ Sbjct: 238 FYRDEILTNDMLPTKFTAMTACFRSEAGSAGRDTRGLIRMHQFNKVEMVRFERPEDSYAA 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL++L++ YR ++LC+GD+GF A KTYD+EVWL + Y+EISSCS + Sbjct: 298 LEDMTRSAESILEKLNIPYRTIALCSGDIGFGAAKTYDVEVWLPSYDAYKEISSCSNMTD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N R++ + + +TLNGSG+AVGR A++ENY N DGS+T+P VL PYM Sbjct: 358 FQARRANIRFKRDKNAKAELVNTLNGSGLAVGRTFAAVVENYQNEDGSITVPEVLVPYMG 417 Query: 419 NLAVIK 424 VIK Sbjct: 418 GQTVIK 423 >gi|91200885|emb|CAJ73940.1| strongly similar to seryl-tRNA synthetase [Candidatus Kuenenia stuttgartiensis] Length = 439 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 183/441 (41%), Positives = 273/441 (61%), Gaps = 18/441 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI +IR N + A+ + + + IL +D + R I+ E ++ +RN S + Sbjct: 1 MLDIHFIRNNVNAVKEAIANKQEIAVNIDAILEIDAQRRKKIQICEQLKNQRNEKSRAVS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + G A+ ET + + + ++ E ++ S L L+ IPN+P +VP+G A Sbjct: 61 ELKKNGQ--DASAIIEETKKIGDDIKSIDGELRDMESQLNDLLLGIPNIPAADVPVGKDA 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N ++R G++ + + H+E+G L ++D +RA K++G+ F +L G A LERAL Sbjct: 119 SDNEIVRYWGERKAFHFTPQPHWELGRTLDILDLERAAKITGSGFILLKGAGAKLERALF 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR------------- 226 FM+D+HT +HGYTE+ P LV ++M GTGQ+PK DDM+ T Sbjct: 179 NFMLDIHTRDHGYTEIFPPFLVNRKSMTGTGQLPKLEDDMYRTLQMYTAHASEKKAVAED 238 Query: 227 -WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +L+PT+EV +TN++ EI+ K+LP+ +T P FR EAGS G+DTRG++R HQF K E Sbjct: 239 LFLVPTAEVPVTNIHRDEILLYKNLPIYYTAYTPCFRREAGSYGKDTRGIMRVHQFNKVE 298 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 LV + R E S+ E E +L+ AE+IL+ L+L YRVV LCTGD+ F+A K YD+EVW G + Sbjct: 299 LVKLVRPETSYGELETLLANAEKILQLLELEYRVVKLCTGDMSFAAAKCYDIEVWAPGVD 358 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 Y E+SSCS +FQ+RR+N R+RD + K L++ HTLNGSG+A+ R +IAILE Y DG Sbjct: 359 KYLEVSSCSNFEDFQARRINLRFRDEDGK-LQYVHTLNGSGLALPRTVIAILETYQQEDG 417 Query: 406 SVTIPTVLRPYMNNLAVIKKE 426 S+ IP VL+PYM +I + Sbjct: 418 SILIPDVLQPYMKETRIIANQ 438 >gi|191638818|ref|YP_001987984.1| seryl-tRNA synthetase [Lactobacillus casei BL23] gi|238693001|sp|B3W8V7|SYS_LACCB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|190713120|emb|CAQ67126.1| Seryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase) (SerRS) [Lactobacillus casei BL23] gi|327382865|gb|AEA54341.1| Seryl-tRNA synthetase [Lactobacillus casei LC2W] gi|327386050|gb|AEA57524.1| Seryl-tRNA synthetase [Lactobacillus casei BD-II] Length = 427 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 181/431 (41%), Positives = 270/431 (62%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQ PE L R ++ + + +L+LD + R + + E+++A+RN S QI Sbjct: 1 MLDLKLIRQKPEWAKEKLAARAIKGEEIDELLALDTRRRQVTVQTEELKAKRNDVSGQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + +++ L+KE ++ + ++ +PN P ++VP+ + Sbjct: 61 VMKR--NKENADDQIKAMREVGQKIAALDKELAQLNEKVTYILVRLPNFPADDVPMSLNE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +++ G P+ + H++IGE LG++DF+RA K++G+RF G A LERA+ Sbjct: 119 DDSREEYKWGNMPTFDFEPKHHWDIGEKLGILDFERAAKVAGSRFVYYKGAGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSL 236 F +D H + GY E+ P LV +++M+GTGQ PKF D + T+ LIPT+EV L Sbjct: 179 NFFLDEH-QKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTITNDGEPLTLIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y ++I++++ LP+ FT L P+FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 238 VNYYRNDIVDAEKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + + ++ AE++L++L L Y V++L + D F++ KT DLEVW+ Q+ YREISSCS C Sbjct: 298 KQLQNLIHDAEDLLQKLGLPYHVITLASNDASFTSAKTNDLEVWMPAQDRYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD + K L+F HTLNGSG+AVGR + +ILENY ADGSV IP VL PY Sbjct: 358 TDFQARRAQIRYRDDDGK-LQFVHTLNGSGLAVGRTVASILENYQQADGSVKIPDVLVPY 416 Query: 417 MNNLAVIKKEH 427 M I KE Sbjct: 417 MQGQTAITKED 427 >gi|159027764|emb|CAO89634.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 427 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 191/422 (45%), Positives = 265/422 (62%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR+NPE + L R IL L+++ + L + ++AR N +GQ Sbjct: 1 MLDLKQIRENPEEVQKRLDSRGGSYDIAPILQLNQQQKALELERSSLQARGNEIGKLVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + G N + A+K E + +K +L LE +E E+ +++ + I +PN+P E PIG Sbjct: 61 KVKSGSDVNSPEILAMKTEGNEIKSKLAQLEPQEKEIKAAIDQKILDLPNLPSETTPIGK 120 Query: 118 SANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 EN+ +R + H+EIGE LG++DF+RA K++ +RF L A LER Sbjct: 121 DERENVEVRRWGEEYKPTNPNILPHWEIGEKLGILDFERAVKIAQSRFVNLIALGAALER 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVS 235 AL FM+D H GYTEV P+L+ +++ GTGQ+PKFA++ F C D WL PT+EV Sbjct: 181 ALINFMLDRHI-VAGYTEVLPPILINSDSLRGTGQLPKFAEESFKCRDDELWLAPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLY EI+ S+ LP++ P FR EAGS G+DTRG++R HQF K E+V I + S Sbjct: 240 VTNLYRDEILSSEQLPIKHCAYTPCFRREAGSYGKDTRGLIRLHQFNKVEMVKIVHPDAS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EHE +++ AE IL+ L L YRV+ LCTGDLGFSA K YDLEVWL N YREISSCS Sbjct: 300 AQEHESLVANAEAILQALQLPYRVIELCTGDLGFSAAKCYDLEVWLPSANTYREISSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR N R+++ K F HTLNGSG+A+GR + A+LENY ADG+V +P VL+P Sbjct: 360 FRDFQARRANIRFKEKGQKGTNFVHTLNGSGLAIGRTMAAVLENYQQADGTVKVPEVLQP 419 Query: 416 YM 417 Y+ Sbjct: 420 YL 421 >gi|94986559|ref|YP_594492.1| seryl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] gi|94730808|emb|CAJ54170.1| Seryl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 424 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 182/416 (43%), Positives = 260/416 (62%), Gaps = 4/416 (0%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV 70 PE + AL R LD K R L+ ++E ++A+RN S Q+ Q G Sbjct: 12 PEIVSTALIHRGSPLNITSFEELDTKRRELLSEVETLKAKRNQASIQVAQMKRNG--ENT 69 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + + E S L ++ +L+ ++V + L + +PN+P VPIG +N I G+ Sbjct: 70 NTIIAELSELSSKIVVLDNMINQVKNELYDWMLAVPNIPHYSVPIGKDETDNKEIYRWGE 129 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 P +EH+E+G L +DF+RA+K++G+RF++L A LER+L F +D H ++ Sbjct: 130 IPIFDFQPKEHWELGSTLQGLDFERASKITGSRFTILWKWAARLERSLINFFLDFHLAQ- 188 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEIIESKS 249 G TEV PL+V +++M TGQ+PKFADD+F +LIPT+EV LTN++S EII+ Sbjct: 189 GRTEVLPPLIVNEKSMTNTGQLPKFADDLFKLEGTDYFLIPTAEVPLTNIHSDEIIDEYL 248 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LPL + FRSEAGSAG+DT+G++RQHQF K E+V + + S+ E+M AE + Sbjct: 249 LPLSYCAQTACFRSEAGSAGKDTKGLIRQHQFTKVEMVYFSHPDQSYDLLEQMRKSAETL 308 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR 369 L++L+L YR V LCTGDLGFS+ KTYD+EVWL GQN Y+EISSCS C +FQ+RR N R+R Sbjct: 309 LEQLELPYRTVVLCTGDLGFSSSKTYDIEVWLPGQNTYKEISSCSNCESFQARRANIRFR 368 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 + + +F HTLNGSG+ +GR ++AILEN DGSV +P L PYM + I+ Sbjct: 369 ASSGEKTQFVHTLNGSGLPIGRTIVAILENGQQKDGSVKLPKKLVPYMGGIECIEP 424 >gi|121606224|ref|YP_983553.1| seryl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] gi|166222759|sp|A1VSK4|SYS_POLNA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|120595193|gb|ABM38632.1| seryl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] Length = 444 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 186/443 (41%), Positives = 264/443 (59%), Gaps = 24/443 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ L+ R E +L+ + + + + E+++ +R + S Q Sbjct: 1 MLDINLLRKDLPSAIARLETRKSPQTFLNVEAFQTLEAERKAVQIRTEELQGQRGTLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ ++G A+ S K +L K ++ + ++ L+ +PN+P + VP G Sbjct: 61 IGQLKSKG--EDASAVMALVSHSKAELESSAKRLEQIQTEMQALLLAVPNLPHDSVPQGI 118 Query: 118 SANENILIRSVGK-------KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 N+ +R + R+H ++G+ LG +DF+ TKL+G+RF+V+ G Sbjct: 119 GEAGNVEVRKWSPFEGLGGEPAALSFEPRDHVDVGQPLG-LDFELGTKLTGSRFTVMKGP 177 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM----------F 220 LA L RAL QFM+D+ T+EHGYTE P +V +++ GTGQ+PKF +D+ Sbjct: 178 LARLHRALSQFMLDVQTAEHGYTECYVPYIVNSDSLRGTGQLPKFEEDLFAARKGGQEGQ 237 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 +LIPTSEV LTN E++ LPL+FT P FRSEAGS GRDTRGM+RQHQ Sbjct: 238 AENAALYLIPTSEVPLTNFVRDEVVPEAQLPLKFTAHTPCFRSEAGSYGRDTRGMIRQHQ 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E+V + E S+ E M AE IL++L L YRV+ LCTGD+GF A KTYDLEVW Sbjct: 298 FDKVEMVQVVHPEKSYEALEAMTGHAEVILQKLGLPYRVMLLCTGDMGFGATKTYDLEVW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 L Q+ YREISS S C FQ+RR+ +R+++ K+ +F HTLNGSG+AVGR L+A+LENY Sbjct: 358 LPAQSTYREISSVSNCEAFQARRLQARFKNAQGKN-EFVHTLNGSGLAVGRTLVAVLENY 416 Query: 401 LNADGSVTIPTVLRPYMNNLAVI 423 ADG V IP VL+PYM + + Sbjct: 417 QRADGGVDIPAVLQPYMGGMTTL 439 >gi|282891888|ref|ZP_06300367.1| hypothetical protein pah_c200o037 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498148|gb|EFB40488.1| hypothetical protein pah_c200o037 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 436 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 168/431 (38%), Positives = 258/431 (59%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IRQNPE + +K + E + IL LD ++R + K+E +++ RN S QI Sbjct: 9 MLDIKLIRQNPEAIKAKVKTKEPSSESVIDAILVLDRQSREIKTKVEQLKSERNVLSDQI 68 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G AL + S+ +++ L+ + L +L+S IPN+P++++P+ S Sbjct: 69 GALKRRG--EDASALLEKVSSFGDEIHSLDHALAPLEEELIQLLSTIPNLPMDDIPVSDS 126 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N++I+ ++P + H E+ E L L DF R K+SG + V G A LE AL Sbjct: 127 PKDNVMIKEFKQRPVFDFPFKNHVELNERLELFDFKRGAKISGTGWPVYRGMGARLEWAL 186 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVS 235 +MI++H ++G+ + P+LVR E ++G+GQ+PKF + F D +LIPT+EV Sbjct: 187 LNYMIEIHI-KNGFEQWIPPILVRKEILFGSGQLPKFENQQFKINDPDYHLYLIPTAEVP 245 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L L+ EI+E+ LPL++ P FR EAG+AG RG++R HQF K E+ ++ E+S Sbjct: 246 LNGLHYDEILETDHLPLKYIAYTPCFRREAGAAGSQERGLIRMHQFNKVEMFCFSKPEES 305 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 ++M++ AEEIL+ LDLHYR + L TGD+ F++ +T D+EVWL GQ+ Y E+SS S Sbjct: 306 MKLFDQMMASAEEILQGLDLHYRNMLLVTGDMSFASARTVDIEVWLPGQDRYYEVSSVSN 365 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR R+R + + HTLNGSG+A R ++A+LEN DGSV IP VL+ Sbjct: 366 CTDYQSRRSQIRFR-KKGEKPELVHTLNGSGLATSRLMVALLENNQQPDGSVLIPPVLQK 424 Query: 416 YMNNLAVIKKE 426 Y+ + + Sbjct: 425 YLGGINRLTPT 435 >gi|284163661|ref|YP_003401940.1| seryl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] gi|284013316|gb|ADB59267.1| seryl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] Length = 459 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 180/444 (40%), Positives = 256/444 (57%), Gaps = 21/444 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D ++R+NPE + AL R + E IL +DE+ R L K +++R RN + QIG+ Sbjct: 1 MIDRTYLRENPEEVREALDDRGADVDLEEILEIDERWRELKAKGDELRHERNQITQQIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +AEG + ++ LK ++ +E E E+ L + + +P +P E VP G Sbjct: 61 LVAEGKDEEREEAIEQSKELKSEIEDIETEADELKDELDERLLEVPQIPDESVPKGVDER 120 Query: 121 ENILIRSVGKKPSAI--HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+ R G S H+E+GE L ++D RA K +G+ F L G A LE AL Sbjct: 121 HNVEDRRWGFDDSHDLPEEVTPHYELGEELDIIDEQRAAKTTGSGFYFLKGAGAQLEHAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---------CTTDGRWLI 229 QFM+DLH E GY ++ P+ V+ +M GTGQ+PKFADD + + WL Sbjct: 181 IQFMMDLH-REQGYVDLFPPIPVKSSSMRGTGQLPKFADDAYRLGGSNEEDYEDEDLWLC 239 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+Y+ EI+ LPL+ P+FR EAG G +TRG++R HQF K ELV+ Sbjct: 240 PTAEVPVTNMYADEILLQDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVNF 299 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ----- 344 E+S+ E +L AEE+L++L L YR++ LCTGDL F++ KTYD+EVW G Sbjct: 300 VEPEESYDRLENLLDEAEEVLRQLGLPYRILELCTGDLTFASAKTYDIEVWAPGDDMDDG 359 Query: 345 ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + E+SS S +FQ+RR RYR +S ++ HTLN SG+A+ R ++AILE Y Sbjct: 360 PEEGGRWLEVSSASNFEDFQARRAGLRYRPERHESAEYLHTLNASGLAIPRVMVAILEYY 419 Query: 401 LNADGSVTIPTVLRPYMNNLAVIK 424 N DG+VTIP LRPYM VI+ Sbjct: 420 QNEDGTVTIPEPLRPYMGGKEVIE 443 >gi|161712041|ref|YP_304102.2| seryl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] gi|146325743|sp|Q46F20|SYS_METBF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase Length = 423 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 188/427 (44%), Positives = 270/427 (63%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++++R +P+ + AL R++ + + +L D R + + ++++ +RN + +I Sbjct: 1 MLDLKFVRSSPDIVRHALINRNMSTELIDSLLEYDIAWRKCLTEGDELKHKRNVVTREIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E +L E + ++ ++ + S + +++ IPN+P P+G Sbjct: 61 KLKKENKDTLSK--IEEMQGINSRIKEIDDIIRDYKSKIHEIMLRIPNIPSSTTPVGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N ++R VG+ + H+EIGEAL ++DF++ K+SG F+V G A LERAL Sbjct: 119 NDNPVVRIVGEPRKFTFTPKPHWEIGEALDILDFEKGAKISGQGFTVYKGMGAKLERALV 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 FM+++H + GY EV P+L+ ++AM GTGQ+PKF DDM+ TDG +L PT+EV +TNL Sbjct: 179 NFMLEVHARQ-GYLEVFPPVLINEKAMTGTGQLPKFKDDMYLCTDGYYLAPTAEVPVTNL 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + + IE LP+ T FR EAG G+DTRG++RQHQF K ELV + E S+ E Sbjct: 238 FMDDYIE--KLPVFLTAYTACFRREAGKHGQDTRGIIRQHQFNKVELVKFVKPETSYDEL 295 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AEEILK L L YRVV+LCTGD+GFSA KTYDLEVW+ Q YREISSCS NF Sbjct: 296 EKLTNDAEEILKLLKLPYRVVNLCTGDIGFSAAKTYDLEVWVPTQEKYREISSCSNFENF 355 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R P+ +F HTLNGSG+AVGR ++AILENY DGSV IP VLRPY+ Sbjct: 356 QARRANIRFRTPDG--PQFVHTLNGSGLAVGRTVVAILENYQREDGSVEIPEVLRPYLGG 413 Query: 420 LAVIKKE 426 I E Sbjct: 414 AKEISNE 420 >gi|114327916|ref|YP_745073.1| seryl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] gi|122327121|sp|Q0BSQ2|SYS_GRABC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|114316090|gb|ABI62150.1| seryl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] Length = 423 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 223/423 (52%), Positives = 291/423 (68%), Gaps = 2/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ +R +P D AL +R L + +L+LD R+ +++D +ARRN+ + +IGQ Sbjct: 1 MHDIRALRADPAAFDAALGRRGLPASASSLLALDADRRMAQTRLQDYQARRNALAKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + + L+ L++++ LE + + K L+ +PN EVP G + Sbjct: 61 GKRQGIDTSM--LEATAVALRDEMEALEARSASLDAEQKSLLERLPNTLDAEVPTGPDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++++ VG+ S +R+HFE+GEALG+M FD A +LSGARF VL G LA LERALGQ Sbjct: 119 ANVILKQVGEPISLPFSARQHFELGEALGMMLFDAAARLSGARFVVLRGALARLERALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 +M+DLH++EHG+TE+ P LV D YGTGQ+PKF +D+F TTDGRWLIPT+EV LTNL Sbjct: 179 YMLDLHSTEHGFTEMQVPALVNDATAYGTGQLPKFTEDLFRTTDGRWLIPTAEVPLTNLV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +++ SLP+R T L FRSEAGSAGRDTRGMLRQHQF K E+V ITR EDS EHE Sbjct: 239 ADSVVDEASLPMRMTALTDCFRSEAGSAGRDTRGMLRQHQFHKVEMVCITRPEDSDAEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +L+ L L YR V LC+GD GFSA +TYDLEVWL GQ +REISSCS C +FQ Sbjct: 299 RMTRCAETVLENLGLAYRRVFLCSGDTGFSAARTYDLEVWLPGQQAWREISSCSNCRDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM++RYR + K HTLNGSGVAVGR LIA++E Y DGS+ +P VLRPYM L Sbjct: 359 ARRMSARYRGADGKVAGVPHTLNGSGVAVGRALIAVMETYQREDGSIDVPAVLRPYMGGL 418 Query: 421 AVI 423 I Sbjct: 419 ERI 421 >gi|291532482|emb|CBL05595.1| seryl-tRNA synthetase [Megamonas hypermegale ART12/1] Length = 402 Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 174/401 (43%), Positives = 255/401 (63%), Gaps = 3/401 (0%) Query: 26 QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLP 85 + + L+++ R +I + E++++++N+ S +I + N DA+ E + E++ Sbjct: 2 NLDRFMELEKQRREIIAETENLKSQKNAVSKKISEMKK--NKENADAVILEMRQVGEKIS 59 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 L+K+ EV L ++ IPN+ E VP+G ++N +R G + H++IG Sbjct: 60 QLDKQLREVQDELHDILLRIPNMCHESVPVGKDDSDNPEVRRWGTPREFDFEPKAHWDIG 119 Query: 146 EALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEA 205 L ++D +RA K++G RF+ G A LERAL FM+DLH + GYTE+ AP + ++ Sbjct: 120 ADLDILDPERAAKVTGTRFTFYKGLGARLERALINFMMDLHVDKQGYTEMLAPFIANKDS 179 Query: 206 MYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 M GTGQ+PKF++DMF +L+PT EV TN + EI++ LP ++ FR+E Sbjct: 180 MTGTGQLPKFSEDMFKLEGLDYYLVPTGEVPATNYHRDEILDGDKLPEYYSVYTACFRAE 239 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 AGSAGRDTRG++RQHQF K E++ + E S+ E E+M++ AEE+L+ L++ Y VV LCT Sbjct: 240 AGSAGRDTRGLIRQHQFNKVEMIKFVKPETSYDELEKMVNNAEEVLQLLEIPYHVVKLCT 299 Query: 325 GDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNG 384 GD+GF+A TYD+EVWL N YREISSCS ++Q+RR N ++R +F HTLNG Sbjct: 300 GDIGFTAAMTYDIEVWLPSYNTYREISSCSNVCDYQARRANIKFRRSAGAKPEFVHTLNG 359 Query: 385 SGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 SG+AVGR + A+LENY ADGSV IP VLRPYM + VIKK Sbjct: 360 SGLAVGRTVAAVLENYQQADGSVVIPKVLRPYMGGIEVIKK 400 >gi|72395249|gb|AAZ69522.1| seryl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] Length = 450 Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 188/427 (44%), Positives = 270/427 (63%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++++R +P+ + AL R++ + + +L D R + + ++++ +RN + +I Sbjct: 28 MLDLKFVRSSPDIVRHALINRNMSTELIDSLLEYDIAWRKCLTEGDELKHKRNVVTREIA 87 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E +L E + ++ ++ + S + +++ IPN+P P+G Sbjct: 88 KLKKENKDTLSK--IEEMQGINSRIKEIDDIIRDYKSKIHEIMLRIPNIPSSTTPVGKDE 145 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N ++R VG+ + H+EIGEAL ++DF++ K+SG F+V G A LERAL Sbjct: 146 NDNPVVRIVGEPRKFTFTPKPHWEIGEALDILDFEKGAKISGQGFTVYKGMGAKLERALV 205 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 FM+++H + GY EV P+L+ ++AM GTGQ+PKF DDM+ TDG +L PT+EV +TNL Sbjct: 206 NFMLEVHARQ-GYLEVFPPVLINEKAMTGTGQLPKFKDDMYLCTDGYYLAPTAEVPVTNL 264 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + + IE LP+ T FR EAG G+DTRG++RQHQF K ELV + E S+ E Sbjct: 265 FMDDYIE--KLPVFLTAYTACFRREAGKHGQDTRGIIRQHQFNKVELVKFVKPETSYDEL 322 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ + AEEILK L L YRVV+LCTGD+GFSA KTYDLEVW+ Q YREISSCS NF Sbjct: 323 EKLTNDAEEILKLLKLPYRVVNLCTGDIGFSAAKTYDLEVWVPTQEKYREISSCSNFENF 382 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR N R+R P+ +F HTLNGSG+AVGR ++AILENY DGSV IP VLRPY+ Sbjct: 383 QARRANIRFRTPDG--PQFVHTLNGSGLAVGRTVVAILENYQREDGSVEIPEVLRPYLGG 440 Query: 420 LAVIKKE 426 I E Sbjct: 441 AKEISNE 447 >gi|189499787|ref|YP_001959257.1| seryl-tRNA synthetase [Chlorobium phaeobacteroides BS1] gi|238692278|sp|B3ENZ9|SYS_CHLPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189495228|gb|ACE03776.1| seryl-tRNA synthetase [Chlorobium phaeobacteroides BS1] Length = 427 Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 163/423 (38%), Positives = 248/423 (58%), Gaps = 6/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +IRQ+PE + LKKR E + +L D + R L+++ + ++A RN S Sbjct: 1 MLDINYIRQSPEEVAGMLKKRRQEEDCATLDELLEYDRQRRELVQETDALKALRNKVSKD 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI-G 116 I G S + L E + +++ +++ E+ ++ ++ +PN +VP Sbjct: 61 IAVIKRTGQGS-AEDLIREMKEVADRIAGMDETLGEIEKQMESILLSLPNKLHPDVPEGY 119 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++ +I V + +H ++G LG++DF+R K+SG F V G A LER Sbjct: 120 SAEENHICKDPVAFDHALDFPLMDHLDLGNKLGILDFERGAKISGTGFPVYIGKGARLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL FM+D HT HGYTEV P +V ++++ GTGQ PKFAD ++ D + IPT+EV Sbjct: 180 ALLNFMLDCHTENHGYTEVFPPFMVNEDSLRGTGQWPKFADQVYYMNEDNLYAIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNL+ +E+++ + LP+ + + FR EAGS G+DTRG LR HQF K E+V TR E+S Sbjct: 240 VTNLHRNEMLKDEELPISYAAYSACFRREAGSYGKDTRGFLRVHQFNKIEMVKFTRPEES 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E++L AE IL L + YRV+ LC+GD+ A K YD+EVW + Y E SSCS Sbjct: 300 YDALEKILQNAEAILNALRIPYRVLLLCSGDISAGATKCYDIEVWSPAEKKYLEASSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RR N R++ S + HTLNGSG+A R ++++LENY A+G++ +P VLR Sbjct: 360 FEDYQARRANIRFKPAGSSKPTYVHTLNGSGLATSRLMVSLLENYQTAEGTIVVPEVLRK 419 Query: 416 YMN 418 Y Sbjct: 420 YTG 422 >gi|86138471|ref|ZP_01057045.1| seryl-tRNA synthetase [Roseobacter sp. MED193] gi|85824996|gb|EAQ45197.1| seryl-tRNA synthetase [Roseobacter sp. MED193] Length = 430 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 209/429 (48%), Positives = 281/429 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D AL +R S IL+LDE R I++ E +A +N + +IG Sbjct: 1 MHDIRAIRENPAAFDAALARRGDAGVSSDILALDEARRAKIQEAEAAQAAQNKAAKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G+ + L+ E + K Q+ L+ E E+ + +++ I N+P E+VP G + Sbjct: 61 AKAKGDTETFERLRAEVAEKKAQVAALQTEAKELDAKQTDMLARIANLPAEDVPEGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G ++EHFEI MDF+ A K SGARF L G +A + RAL Q Sbjct: 121 DNVEVNRWGTPRELDFDAKEHFEIAGVAQAMDFETAAKTSGARFVFLKGGVARIHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G TEV P+LVRDEAMYGT ++PKF DD + TT+G WL+PTSEV+LT Sbjct: 181 FMVDTHVDENGLTEVQTPVLVRDEAMYGTDKLPKFGDDSYQTTNGWWLVPTSEVTLTYSV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +++E+ LP+R T FRSEAGSAGRDT GMLRQHQF K E+VSIT ++S +E + Sbjct: 241 AGDVLEASDLPIRMTAHTQCFRSEAGSAGRDTSGMLRQHQFEKVEMVSITHPDESDSEQK 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML CAE +L++L + YR V LCTGD+GF A +T+D+E WL GQN YREISS ST G FQ Sbjct: 301 RMLRCAEGLLEKLGVPYRTVVLCTGDMGFGARRTFDIEAWLPGQNTYREISSVSTTGAFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R + +F H+LNGSG+AVGRCLIA+LEN ADGSVT+P VL PY+ Sbjct: 361 ARRMNARFRPADGGKPEFVHSLNGSGLAVGRCLIAVLENGQQADGSVTLPEVLGPYLKGK 420 Query: 421 AVIKKEHIL 429 + L Sbjct: 421 LTLTATGEL 429 >gi|159900855|ref|YP_001547102.1| seryl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|238687062|sp|A9AY92|SYS_HERA2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|159893894|gb|ABX06974.1| seryl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 422 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 178/425 (41%), Positives = 261/425 (61%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R+ PE + K +P + ++ LD K R I ++E ++A RN+ S + Sbjct: 1 MLDIRLFREQPELVREGFAKVGRDPGLVDQVIGLDLKRREAITEVERLKAERNAGSKDVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + D + +Q+ L+ + + + L L+ +PN+PL EVP+G Sbjct: 61 RTK---DKAERDVKIAAMKLVGDQITELDAQANAIDLELHNLLLDLPNLPLPEVPVGKDE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+++R G + H+E+GEALG++DF+R ++SG RF V+ G L+RAL Sbjct: 118 HDNVVVRVEGTIQEPDFAVKPHWELGEALGILDFERGVRMSGTRFFVMKGLGVRLQRALI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 +MID+H +HGYTE++ P LV+ +AM GTG +PKFAD +F WLIPT+EV +TN Sbjct: 178 SWMIDMHVDQHGYTELAVPYLVKADAMVGTGNLPKFADTIFHIEDTDLWLIPTAEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI++ LPLR+ P FR+E SAGRD RG+ R +QF K E+V + S+ E Sbjct: 238 LHREEILDKAQLPLRYVAHTPCFRNEQMSAGRDVRGIKRLYQFDKVEMVKMVEPATSYDE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ++S AE++ K L + YR++ LCT DLG + K YDLE+W G N + E+SSC G+ Sbjct: 298 LFSLISNAEDVCKGLKIPYRLLQLCTADLGIATVK-YDLEMWAPGMNEWLEVSSCGLFGD 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR N RYR +F HTLNGSG+A+ R +IAILENY NADGSVT+P VLRPYM Sbjct: 357 YQARRANIRYRPEAGAKPEFVHTLNGSGLALPRVIIAILENYQNADGSVTVPEVLRPYMG 416 Query: 419 NLAVI 423 + I Sbjct: 417 GIERI 421 >gi|282898294|ref|ZP_06306285.1| tRNA synthetase, class II (G, H, P and S) [Raphidiopsis brookii D9] gi|281196825|gb|EFA71730.1| tRNA synthetase, class II (G, H, P and S) [Raphidiopsis brookii D9] Length = 426 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 266/428 (62%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+NP+ + L R + + IL L +K R L + +++AR N +GQ Sbjct: 1 MLDIKQIRENPQLIQKKLNSRGGKYDIQPILDLSQKQRELELERNELQARSNEIGKLVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + G + +LK E + +K +L LE E E+ +++L+ +PN+P + PIG Sbjct: 61 KVKTGIGPQSEEILSLKEEGNLVKTKLTDLEPREKELKGQIEQLLLALPNLPSDSTPIGE 120 Query: 118 SANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 S ++N IR + H+EIGE LG+++F+RA K++ +RF L G A LER Sbjct: 121 SEDDNPEIRRWGDEYKPQNANILPHWEIGEKLGILNFERAVKIAQSRFVNLIGAGAALER 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVS 235 AL QFM+ H ++GY E+S PLLV +++ GTGQ+PKF + C D WLIPT+EV Sbjct: 181 ALIQFMLSKHI-DNGYIEISPPLLVNTDSLTGTGQLPKFAQESFKCAEDELWLIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLY EI+ + LP+ T P FR EAGS GRD RG++R HQF K ELV I E S Sbjct: 240 VTNLYRGEILNKEDLPIYHTAYTPCFRREAGSYGRDMRGLIRLHQFNKVELVKIVTPESS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 F E E+++ AE IL+ L L YRV+ LCTGDLGF A KTYDLEVWL + YREISSCS Sbjct: 300 FEELEKLVGSAESILQSLKLPYRVIELCTGDLGFGATKTYDLEVWLPSLDKYREISSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +FQ+RR + R+++ K +F HTLNGSG+AVGR + AILENY DG++ +P LR Sbjct: 360 CIDFQARRADIRFKESGKKGTRFVHTLNGSGLAVGRTMAAILENYQQHDGTIKVPEALRS 419 Query: 416 YMNNLAVI 423 Y+ V+ Sbjct: 420 YL-GREVL 426 >gi|220927137|ref|YP_002502439.1| seryl-tRNA synthetase [Methylobacterium nodulans ORS 2060] gi|254783036|sp|B8IN20|SYS_METNO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|219951744|gb|ACL62136.1| seryl-tRNA synthetase [Methylobacterium nodulans ORS 2060] Length = 437 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 235/437 (53%), Positives = 293/437 (67%), Gaps = 11/437 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D L KR LEP S +++LD+ + I + + RRN+ S +IG Sbjct: 1 MHDIRVIRENPAAFDEGLAKRGLEPLSAELIALDDARKAAISAAQGAQERRNALSKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E + LK++ P LE +L ++ IPN P EVP+G + Sbjct: 61 AKKAKDEARAQDLMAEVARLKDEAPALEAAADAAAKALDARLAAIPNTPKAEVPLGRDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ R R+HFE+GEA GLMDF+ A KLSGARF VL GHLA LERALGQ Sbjct: 121 DNVEYRRFE-GRGRAEAGRQHFELGEATGLMDFEAAAKLSGARFVVLKGHLARLERALGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----------GRWLIP 230 FM+DLHT+EHGYTEV+ PLLVRDE M+GT Q+PKF DD F RWLIP Sbjct: 180 FMLDLHTTEHGYTEVAPPLLVRDEVMFGTAQLPKFRDDQFAAMPGSVEAEGGAPTRWLIP 239 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV LTNL I+ LPLRFT L P FR+EAG+AGRDTRGMLRQHQF K ELVS+T Sbjct: 240 TAEVPLTNLVRESILSEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFTKVELVSVT 299 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E S EHERML+ AE +LK+LDL YRVV+LCTGD+GF++ KTYD+EVWL GQ +REI Sbjct: 300 TPEQSDEEHERMLASAEAVLKKLDLPYRVVTLCTGDMGFASQKTYDIEVWLPGQGTFREI 359 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS CG+FQ+RRM++R+R + + HTLNGSGVAVGR LIA++ENY N DGSVT+P Sbjct: 360 SSCSVCGDFQARRMDARFRRREGRGVAHVHTLNGSGVAVGRALIAVMENYQNPDGSVTVP 419 Query: 411 TVLRPYMNNLAVIKKEH 427 + L PYM + I+ H Sbjct: 420 SALVPYMGGITRIEGPH 436 >gi|332687374|ref|YP_004457147.1| seryl-tRNA synthetase [Melissococcus plutonius ATCC 35311] gi|332687375|ref|YP_004457148.1| seryl-tRNA synthetase [Melissococcus plutonius ATCC 35311] gi|332371383|dbj|BAK22338.1| seryl-tRNA synthetase [Melissococcus plutonius ATCC 35311] gi|332371384|dbj|BAK22339.1| seryl-tRNA synthetase [Melissococcus plutonius ATCC 35311] Length = 423 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 270/426 (63%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N ++L + ++R +E +++L LD+ R ++ K+E+ + RN S ++ Sbjct: 1 MLDIKKIRKNYDNLIVLFEQRGVEKSTIDHLLELDQTRRNILPKLEEQKQLRNKLSDEVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + S + + + + L E ++ +PN+P E VP Sbjct: 61 ELKKSNQSSEEN--IENIRKINKNIKELAGELSLTEKQYTDILVNLPNLPDETVPFVQDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++NI ++ K + H+EIGEAL ++DF R K++GARF A LERA+ Sbjct: 119 DDNIEVKRWSKPRQFDFHPKAHYEIGEALDILDFQRGAKVTGARFLYYKNLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H +EHG+ E+ P +V ++M+GTGQ PKF +D+F D + IPT+EV LTN Sbjct: 179 NFMLDTHINEHGFQEMITPYMVNSKSMFGTGQFPKFKEDVFQVADTDYTLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI+ LP+ FT ++P FRSEAGSAG+DTRG++R HQF K E+V T EE S+ E Sbjct: 239 YYANEILSEDELPIYFTAMSPCFRSEAGSAGKDTRGLIRLHQFHKVEMVKFTTEETSYDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + EEIL++L+L YR + LCTGD+GFSA KTYD+EVW+ QN YREISSCS C + Sbjct: 299 LESLTRAGEEILEKLELPYRTIVLCTGDMGFSAAKTYDIEVWMPAQNTYREISSCSNCVD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYR + + +K+ HTLNGSG+AVGR + AI+ENY N DGSVTIP VL+PYM Sbjct: 359 FQARRAMIRYRTKDGE-IKYAHTLNGSGLAVGRTVAAIIENYQNEDGSVTIPEVLQPYMG 417 Query: 419 NLAVIK 424 +V+K Sbjct: 418 GQSVLK 423 >gi|289422591|ref|ZP_06424434.1| serine--tRNA ligase [Peptostreptococcus anaerobius 653-L] gi|289157163|gb|EFD05785.1| serine--tRNA ligase [Peptostreptococcus anaerobius 653-L] Length = 443 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 183/422 (43%), Positives = 271/422 (64%), Gaps = 8/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH---LEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD++ IR+N E + + + +R +P + +++LD+K + ++K++E ++ + N +S Sbjct: 19 MLDVKRIRENLEDIKVLMGRRGEGEFDPKDLDEVIALDDKRKEILKEVEVMKNQSNVDSK 78 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I + I G + +K E L +++ L+ + EV L + IPNVP +VP G Sbjct: 79 KIPEMIKNGQ--DIGPIKAELKELSDKIKELDAQLKEVEEGLVYRLLRIPNVPNPDVPQG 136 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +N+ IR+ G+ + H++IG L ++DF+R K++G+RF+VL G A LER Sbjct: 137 ETDEDNVQIRTWGEPRKFDFEEKAHWDIGTDLDILDFERGGKITGSRFTVLKGLGARLER 196 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVS 235 AL F +D H SE+GYTE+ P + + GTGQ+PKF +DMF + +PT+EV Sbjct: 197 ALLSFYMDQH-SENGYTEIIPPFMANRNSFIGTGQLPKFEEDMFKIEGLDYFLVPTAEVP 255 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLY++EI++ SLP++ P FRSEAGSAGRDTRG++RQHQF K ELV + EDS Sbjct: 256 VTNLYNNEIVDFDSLPIKHCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDS 315 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E E + + AE++L+ L L YRVV +CTGDLGF+A K YDLEVW+ N Y EISSCS Sbjct: 316 YEELESLTNDAEKMLQLLGLPYRVVKICTGDLGFTAAKKYDLEVWMPSYNRYVEISSCSN 375 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR N R++ + +F HTLNGSG+A+GR + AILENY DG+V +P LR Sbjct: 376 FEDFQARRANIRFKRDRNAKTEFVHTLNGSGLAIGRTVAAILENYQQEDGTVVVPEALRS 435 Query: 416 YM 417 YM Sbjct: 436 YM 437 >gi|225874558|ref|YP_002756017.1| serine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] gi|254782997|sp|C1F4G5|SYS_ACIC5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|225793357|gb|ACO33447.1| serine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] Length = 444 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 200/444 (45%), Positives = 267/444 (60%), Gaps = 17/444 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD+ ++R N E ++ L+ R P ++D+ R I + E ++A RN S ++ Sbjct: 1 MLDLAFVRANLELVEARLRARGQNPAELLGDFAAVDQHRRERITEAEQLKATRNKLSEEV 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + A+ ET LK ++ LE+ E L++ ++ IPN+P E+VP G S Sbjct: 61 ARLRKA--KEDASAVMEETRQLKTKIEDLERAATEAEEQLRERMARIPNLPYEDVPTGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N+ ++ G + H+E+GE LG++DF+RA KLSGARF+V A LERAL Sbjct: 119 AEDNVEVKRWGTPREFDFAPKPHWELGEQLGILDFERAAKLSGARFAVYWAEGARLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------------DGR 226 FM+DLHT EHGYTEV PL+V +++GTGQ+PKFA+D+F + Sbjct: 179 AAFMLDLHTREHGYTEVLPPLMVNSRSLFGTGQLPKFAEDLFRCEDGEPYQAGKYRENDH 238 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 WLIPT+EV LTNL+ E ++ L FRSEAGS G+D RG++RQHQF K EL Sbjct: 239 WLIPTAEVPLTNLFRDETLDDSQLSTSLVAHTSCFRSEAGSYGKDVRGIIRQHQFQKVEL 298 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 V TR EDS EHE + AE +L+RL L YR + LCTGD+GFS+ KTYDLEVWL GQ + Sbjct: 299 VKFTRPEDSAAEHEALTRHAETVLERLGLPYRRMLLCTGDMGFSSAKTYDLEVWLPGQQV 358 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 YREISSCS FQ+RR RYR HTLNGSG+A+GR +AILENY ADGS Sbjct: 359 YREISSCSNFDAFQARRAGIRYRPRGQGKSAHVHTLNGSGLAIGRTWLAILENYQQADGS 418 Query: 407 VTIPTVLRPYMNNLAVIKKEHILE 430 V IP L PYM VI+ ++ + Sbjct: 419 VRIPEALIPYM-GTEVIESRNVAQ 441 >gi|86609248|ref|YP_478010.1| seryl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|123501982|sp|Q2JKN4|SYS_SYNJB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|86557790|gb|ABD02747.1| seryl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 435 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 197/433 (45%), Positives = 272/433 (62%), Gaps = 6/433 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ +R PE + AL+ R + IL LD + R L + ++A NS ++G+ Sbjct: 1 MLDLKLLRDRPEQVRQALQNRRATVDLDGILQLDRERRQLETRKGSLQAESNSLGKKVGE 60 Query: 61 AIAEGNLS---LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I +G V AL+ LK ++ LE++E E+ ++ + +PN+PL VP+G Sbjct: 61 IIRQGADPQGPEVAALRQRGVDLKAEIAQLEQQERELEEEIRARLLTLPNLPLPSVPVGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N+ +R G++ H H EI E LGL++ RA K++ +RF + G A LERA Sbjct: 121 DEADNVEVRRWGEELKPAHPVLPHDEIAEKLGLLEIGRAVKVAQSRFVAMVGAGAALERA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L M++ H GYTEV P LV A+ GTGQ+PKFA+D F C D WLIPT+EV L Sbjct: 181 LIAMMLERHI-AAGYTEVIPPFLVNSAALQGTGQLPKFAEDSFRCADDDLWLIPTAEVPL 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY E+I ++SLPL F P FR EAGS GRDT+G++R HQF K ELV +TR + S Sbjct: 240 TNLYRDEMIPAESLPLYFCAYTPCFRREAGSYGRDTKGLIRLHQFQKVELVKVTRPDQSE 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHE+++ AE IL+ L+L YRVV LC+GDLGF+A + +DLEVW QN YREISSCS C Sbjct: 300 AEHEKLVQDAEAILQMLELPYRVVELCSGDLGFAAARCFDLEVWFPSQNQYREISSCSNC 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N RY++ K +F HTLNGSG+AVGR L A+LEN+ DGS+ IP LRP+ Sbjct: 360 WDFQARRANLRYKEAGQKGTQFVHTLNGSGLAVGRSLAALLENHQQPDGSIRIPKALRPF 419 Query: 417 MNNLAVIKKEHIL 429 ++ + ++ IL Sbjct: 420 LS-SRFLSEDGIL 431 >gi|148259967|ref|YP_001234094.1| seryl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|166200591|sp|A5FX43|SYS_ACICJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|146401648|gb|ABQ30175.1| seryl-tRNA synthetase [Acidiphilium cryptum JF-5] Length = 433 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 241/434 (55%), Positives = 293/434 (67%), Gaps = 13/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-------EPQSEYILSLDEKNRILIKKIEDIRARRNS 53 M D++ IR + A+++R L E + I +LDE+ R +++ RRN Sbjct: 1 MHDLKAIRDDAAAFGAAMRRRGLAGPEGADEGAAAPIRALDEERRRAQTELQGHETRRNE 60 Query: 54 NSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 + IGQA G AL+ E + L++ + E L +L++ +PNV +V Sbjct: 61 LARAIGQAKRAG--EDTTALEAEGTALRQSIETANAWLAESARKLDELLAVLPNVLDADV 118 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 P G N+ + VG PS +R+HFE+GEALGLMDF A KL+GARF+VL G LA Sbjct: 119 PDGPDETANVEQKRVGAPPSFDFEARQHFELGEALGLMDFAGAAKLAGARFTVLRGDLAR 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSE 233 LERALGQFM+DLH +EHGYTEVS PLLV D MYGTGQ+PKFA+D+F TTDGRWLIPT+E Sbjct: 179 LERALGQFMLDLHVNEHGYTEVSPPLLVNDATMYGTGQLPKFAEDLFRTTDGRWLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTNL + EI+++ SLPLR T L PSFRSEAGSAGRDTRGMLRQHQFWK ELVS+T E Sbjct: 239 VPLTNLAAGEILDAASLPLRMTALTPSFRSEAGSAGRDTRGMLRQHQFWKVELVSLTTPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S EHERM SCAE +L+RL L YR + LC GD GFS+ KTYDLEVWL GQ YREISSC Sbjct: 299 ASADEHERMTSCAESVLERLGLPYRRMLLCAGDTGFSSAKTYDLEVWLPGQGAYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 S C FQ+RRMN+RYR P + F HTLNGSGVA GR LIA++ENY NADGS+T+ Sbjct: 359 SNCRAFQARRMNARYRPPQTGPKPAKPDFVHTLNGSGVATGRALIAVMENYQNADGSITV 418 Query: 410 PTVLRPYMNNLAVI 423 P LRPYM I Sbjct: 419 PDALRPYMRGCDRI 432 >gi|313680047|ref|YP_004057786.1| seryl-tRNA synthetase [Oceanithermus profundus DSM 14977] gi|313152762|gb|ADR36613.1| seryl-tRNA synthetase [Oceanithermus profundus DSM 14977] Length = 417 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 179/421 (42%), Positives = 266/421 (63%), Gaps = 7/421 (1%) Query: 1 MLDIQWIRQNPEHLDIAL-KKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD+++IR++P+ + + KKR + P + +L LD + R L+ +IE +RA++ + Sbjct: 1 MLDLRFIREHPDLVKEGIRKKREFDALPLVDELLELDRRRRELLAEIETLRAQQKKLAKA 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +GQA A G L ++S L E L LE EE ++ + ++ ++ IPN+P VP G Sbjct: 61 VGQAKARG--EDAGPLLEKSSELAEYLRGLEAEEKQLSARIQAILPQIPNLPHPSVPEGE 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N++++ G+KP + H+E+ E LG++DF+R K+SG+ F G A L RA Sbjct: 119 SEADNVVVKEWGEKPIFDFEPKPHWELAERLGVVDFERGAKVSGSGFPFFLGRGARLVRA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L F +D HT G+ EV PLLVR+ A +GTGQIP M+ + G +LIPTSEV +T Sbjct: 179 LENFFLDFHT-ARGFVEVRPPLLVREPAAFGTGQIPDKEGMMYEVSGGYYLIPTSEVPVT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL++ EI+E+ LPL++T P+FR EAGS G+D RG+ R HQF K E+V + ++S+ Sbjct: 238 NLHAGEILEADRLPLKYTAYTPNFRVEAGSYGKDVRGLNRLHQFDKVEMVVFSHPDESYD 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 ER+ AEE+L+RL L YR + +CT D+GF+ K YDLEVW AGQ + E+SS S Sbjct: 298 WLERLTRQAEELLERLGLPYRRLLMCTADMGFTQAKKYDLEVWSAGQQKWLEVSSISNME 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RRM +R+R+P K + HTLNGSG+A R L A++ENY +G T+P L PY+ Sbjct: 358 DYQARRMKTRFREPGGK-PRLVHTLNGSGLAFPRVLAALMENYQTPEGDFTLPEALAPYL 416 Query: 418 N 418 N Sbjct: 417 N 417 >gi|313125296|ref|YP_004035560.1| seryl-tRNA synthetase [Halogeometricum borinquense DSM 11551] gi|312291661|gb|ADQ66121.1| seryl-tRNA synthetase [Halogeometricum borinquense DSM 11551] Length = 460 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 171/445 (38%), Positives = 261/445 (58%), Gaps = 22/445 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+ Q++R+NPE + AL+ + ++ ++IL +DE+ R L K+ +D+R RN S++IG Sbjct: 1 MISRQFLRENPETVREALRSKGVDDVDLDHILEVDEEWRSLKKRGDDLRHERNETSSKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + AEG + LK +L +E E+ + L++ + +P +P ++VP+G Sbjct: 61 ELKAEGKDEEAQEAIERSQELKSELAEVEDRADELEAELEERLLELPQIPHDDVPVGEDE 120 Query: 120 NENILIRS--VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ R H+++GE L ++DF+R K++G F G A LE A Sbjct: 121 SENVERRREGFDDLRELPDEVIPHYDLGEELDILDFERGAKVTGGGFYFAKGDGARLEHA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWL 228 L QFM+D+H E GY ++ P+ V ++M GTGQ PKF +D + D WL Sbjct: 181 LIQFMMDVH-REQGYVDLFPPIPVNSQSMTGTGQFPKFTEDAYRIGKANGKERDDDDLWL 239 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 PT+EV +TN+Y EI+ LP++ P+FR EAG G +TRG++R HQF K E+V+ Sbjct: 240 CPTAEVPVTNMYRDEILLDDDLPVKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVEMVN 299 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---- 344 R E+S+ + E +L AEE+L+RL+L YR++ +CTGDLGF+ K YD+EVW G Sbjct: 300 FVRPENSYEQFEELLDEAEEVLRRLELPYRILEMCTGDLGFTQAKKYDIEVWAPGDDMED 359 Query: 345 -----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 + E+SS S +FQ+RR RYR +S ++ HTLNGSG+A+ R ++AI+E Sbjct: 360 GPEEGGRWLEVSSVSNFEDFQARRAGLRYRPERHESAEYLHTLNGSGLAIPRVVVAIMEY 419 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIK 424 Y N DG+VT+P LRPYM VI+ Sbjct: 420 YQNDDGTVTVPEALRPYMGGTEVIE 444 >gi|319795325|ref|YP_004156965.1| seryl-tRNA synthetase [Variovorax paradoxus EPS] gi|315597788|gb|ADU38854.1| seryl-tRNA synthetase [Variovorax paradoxus EPS] Length = 443 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 186/446 (41%), Positives = 262/446 (58%), Gaps = 26/446 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++ L+KR +L+ + + + + E+I+ARRN+ + Q Sbjct: 1 MLDITLLRKDLASAVAGLEKRKKNQPYLDVSAFTALEAERKTVQTRTEEIQARRNALNKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG A+G DAL E + LK + K E+ L+ L+ +PN+P VP+G Sbjct: 61 IGPLKAKG--ESTDALMAEVNALKAEQESQSKRLDEIQPELQALLLAVPNLPHASVPVGE 118 Query: 118 SANENILIRSVGKK-------PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 N+ +R + +++H ++G LG +DF+ KL+G+RF+V+ G Sbjct: 119 DETGNVEVRRWSPQGGAGANATPLGFAAKDHVDLGAPLG-LDFEMGAKLAGSRFTVMKGP 177 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---------- 220 +A L RAL QFM+D T +HGY E P +V + GTGQ+PKF D+F Sbjct: 178 IARLHRALAQFMLDTQTEKHGYAECYVPYIVNAATLSGTGQLPKFEGDLFAAKKGGQDGE 237 Query: 221 --CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 +LIPTSEV LTN E++ LP++ T P FRSEAGSAGRDTRGM+RQ Sbjct: 238 PAPDHSALYLIPTSEVPLTNFVRDEVVAESQLPIKLTAHTPCFRSEAGSAGRDTRGMIRQ 297 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 HQF K E+V I E S+ E+M AE +L+ L+L YRVV LCTGD+GF A KTYDLE Sbjct: 298 HQFDKVEMVQIVHPEKSYDALEQMTGHAEAVLQALELPYRVVLLCTGDMGFGATKTYDLE 357 Query: 339 VWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 VWL Q+ YREISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LE Sbjct: 358 VWLPAQDTYREISSVSNCEAFQARRLQARFKNAQGKN-ELVHTLNGSGLAVGRALVAVLE 416 Query: 399 NYLNADGSVTIPTVLRPYMNNLAVIK 424 N+ N DGS+ +P LRPY+ L +++ Sbjct: 417 NHQNEDGSINVPVALRPYLGGLELLR 442 >gi|282901474|ref|ZP_06309399.1| tRNA synthetase, class II (G, H, P and S) [Cylindrospermopsis raciborskii CS-505] gi|281193753|gb|EFA68725.1| tRNA synthetase, class II (G, H, P and S) [Cylindrospermopsis raciborskii CS-505] Length = 426 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 196/428 (45%), Positives = 268/428 (62%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+NP+ + L R + + + IL L +K R L + +++AR N +GQ Sbjct: 1 MLDIKQIRENPQLIQKKLNSRGGKYEIQPILDLSQKQRELELERNELQARSNEIGKLVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + G + +LK E + +K +L LE E E+ +++L+ +PN+P + PIG Sbjct: 61 KVKTGISPQSEELLSLKEEGNLVKTKLSDLEPREKELKGQIEQLLLALPNLPSDSTPIGE 120 Query: 118 SANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 S ++N IR + H+EIGE LG+++F+RA K++ +RF L G A LER Sbjct: 121 SEDDNPEIRRWGDEYKPQNANILPHWEIGEKLGILNFERAVKIAQSRFVNLIGAGAALER 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVS 235 AL QFM+ H E+GY E+S PLLV +++ GTGQ+PKF + C D WLIPT+EV Sbjct: 181 ALIQFMLSKHI-ENGYIEISPPLLVNTDSLTGTGQLPKFAQESFKCAEDELWLIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLY EI+ + LP+ T P FR EAGS GRD RG++R HQF K ELV I E S Sbjct: 240 VTNLYRGEILNKEDLPIYHTAYTPCFRREAGSYGRDMRGLIRLHQFNKVELVKIVSPESS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 F E E+++ AE IL+ L L YRV+ LCTGDLGF A KTYDLEVWL N YREISSCS Sbjct: 300 FEELEKLVGSAESILQSLKLPYRVIELCTGDLGFGATKTYDLEVWLPSFNKYREISSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +FQ+RR + R+++ K +F HTLNGSG+AVGR + AILENY ADG+V +P L+ Sbjct: 360 CIDFQARRADIRFKEAGKKGTRFVHTLNGSGLAVGRTMAAILENYQQADGTVKVPEALQS 419 Query: 416 YMNNLAVI 423 Y+ V+ Sbjct: 420 YL-GREVL 426 >gi|301066873|ref|YP_003788896.1| seryl-tRNA synthetase [Lactobacillus casei str. Zhang] gi|300439280|gb|ADK19046.1| Seryl-tRNA synthetase [Lactobacillus casei str. Zhang] Length = 427 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 182/431 (42%), Positives = 270/431 (62%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQ PE L R ++ + + +L+LD + R + + E+++A+RN S QI Sbjct: 1 MLDLKLIRQKPEWAKEKLAARAIKGEEIDELLALDTRRRQVTVQTEELKAKRNDVSGQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + +++ L+KE ++ + ++ +PN P ++VP+ + Sbjct: 61 VMKR--NKENGDDQIKNMREVGQKMAALDKELAQLNEKVTYILVRLPNFPADDVPMSLNE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +++ G P+ + H++IGE LG++DF+RA K++G+RF G A LERA+ Sbjct: 119 DDSREEYKWGNMPTFDFEPKHHWDIGEKLGILDFERAAKVAGSRFVYYKGAGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSL 236 F +D H + GY E+ P LV +++M+GTGQ PKF D + T+ LIPT+EV L Sbjct: 179 NFFLDEH-QKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTITNDGEPLTLIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y ++II+++ LP+ FT L P+FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 238 VNYYRNDIIDAEKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + + ++ AE++L++L L Y V++L + D F++ KT DLEVW+ Q+ YREISSCS C Sbjct: 298 KQLQNLIHDAEDLLQKLGLPYHVITLASNDASFTSAKTNDLEVWMPAQDRYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD + K L+F HTLNGSG+AVGR + +ILENY ADGSV IP VL PY Sbjct: 358 TDFQARRAQIRYRDDDGK-LQFVHTLNGSGLAVGRTVASILENYQQADGSVKIPDVLVPY 416 Query: 417 MNNLAVIKKEH 427 M I KE Sbjct: 417 MQGQTTITKED 427 >gi|193212290|ref|YP_001998243.1| seryl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] gi|238692624|sp|B3QM90|SYS_CHLP8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|193085767|gb|ACF11043.1| seryl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] Length = 427 Score = 396 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 175/429 (40%), Positives = 262/429 (61%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +IRQNPE + L++R + +L D + + ++++ +D++A RN S + Sbjct: 1 MLDISYIRQNPEEVKEMLRRRQQSDDAPKVDRLLERDAERKAMVQRTDDLKALRNRVSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G S + L ++ + +Q+ L+ + +++L+ +PN E VP G Sbjct: 61 IANIKRTGQGSG-EELISQMKEVSDQIADLDLGLSTLEGEIEELLLTLPNKLHESVPEGR 119 Query: 118 SANENILIR-SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 SA+ENIL + V + + ++H E+G++LGL+DF+R K++GA F V TG A LER Sbjct: 120 SADENILYKGPVSFEHNLDFPVKDHLELGKSLGLLDFERGAKITGAGFPVYTGKGARLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVS 235 AL FM+D H++ HGYTEV P +V E++ GTGQ PKFAD ++ + + IPT+EV Sbjct: 180 ALINFMLDTHSANHGYTEVFPPFMVNKESLRGTGQWPKFADQVYHMPEDGLYAIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNL+ E++E LP+ + + FR EAGS G+DTRG LR HQF K E+V TR E S Sbjct: 240 VTNLHRGEMLEDDKLPIAYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVRFTRPEKS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E +LS AE IL L + YRV++LC+GD+ +A K YD+EVW +N Y E SS S Sbjct: 300 YEALEEILSHAEAILCALKIPYRVITLCSGDISANAAKCYDIEVWSPAENKYLEASSVSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RR N R++ +F HTLNGSG+A R ++++LE+Y ADG + +P VLRP Sbjct: 360 FEDYQARRSNIRFKPGGKGKPEFVHTLNGSGLATSRLMVSLLEHYQTADGKIMVPEVLRP 419 Query: 416 YMNNLAVIK 424 Y VI+ Sbjct: 420 YT-GFDVIE 427 >gi|145588877|ref|YP_001155474.1| seryl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189083578|sp|A4SWP6|SYS_POLSQ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|145047283|gb|ABP33910.1| seryl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 436 Score = 396 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 185/439 (42%), Positives = 259/439 (58%), Gaps = 18/439 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D Q +R++ + L R + E +L+ + + L + E+++A+RN + IG Sbjct: 1 MIDPQLLRKDIAAVQARLATRKFQLDVEKFNTLESERKSLQTRTEELQAKRNQLAKAIG- 59 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +G A E S + + + + + + IPN+P E VP G Sbjct: 60 -MKKGKGEDAAAEMAEASQINVDMESGAARLSVLQAEIADFLMGIPNLPDESVPAGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN ++ G++P ++H ++G LG +DF+ A K+SG+RF VL G +A L RAL Q Sbjct: 119 ENKEVKVWGEQPMFDFEIKDHVDLGGPLG-LDFEVAAKISGSRFVVLKGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-------------- 226 FMID H + HGY EV AP +V +M GTGQ+PKF +D+F Sbjct: 178 FMIDTHATHHGYQEVYAPYMVNAASMRGTGQLPKFEEDLFKVPRQMGGEDEGGEAKTENF 237 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LIPT+EV +TNL EI+ + +LPL+F P FRSEAGS GRD RGM+RQHQF K EL Sbjct: 238 YLIPTAEVPVTNLVRDEIVNADTLPLKFVAHTPCFRSEAGSYGRDVRGMIRQHQFDKVEL 297 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 V IT+ E S E + AE IL+ L+L YR V LCTGD+GF + KTYDLEVW+ QN Sbjct: 298 VQITKPEHSMQALEELTGHAERILELLELPYRKVLLCTGDMGFGSTKTYDLEVWVPSQNA 357 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 YREISSCS+ G+FQ+RRM +R++ K + HTLNGSG+AVGR L+A++EN DGS Sbjct: 358 YREISSCSSMGDFQARRMQARFKAGQGK-PELLHTLNGSGLAVGRALVALIENKQLVDGS 416 Query: 407 VTIPTVLRPYMNNLAVIKK 425 + IP L+PY+ L +K Sbjct: 417 IAIPKALQPYLGGLETLKP 435 >gi|116495303|ref|YP_807037.1| seryl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|227534260|ref|ZP_03964309.1| seryl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|122263281|sp|Q037M7|SYS_LACC3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116105453|gb|ABJ70595.1| seryl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|227188114|gb|EEI68181.1| seryl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 427 Score = 396 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 181/431 (41%), Positives = 270/431 (62%), Gaps = 8/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IRQ PE L R ++ + + +L+LD + R + + E+++A+RN S QI Sbjct: 1 MLDLKLIRQKPEWAKEKLAARAIKGEEIDELLALDTRRRQVTVQTEELKAKRNDVSGQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N D + +++ L+KE ++ + ++ +PN P ++VP+ + Sbjct: 61 VMKR--NKENADDQIKAMREVGQKIAALDKELAQLNEKVTYILVRLPNFPADDVPMSLNE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +++ G P+ + H++IGE LG++DF+RA K++G+RF G A LERA+ Sbjct: 119 DDSREEYKWGNMPTFDFEPKHHWDIGEKLGILDFERAAKVAGSRFVYYKGAGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSL 236 F +D H + GY E+ P LV +++M+GTGQ PKF D + T+ LIPT+EV L Sbjct: 179 NFFLDEH-QKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTITNDGEPLTLIPTAEVPL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N Y ++II+++ LP+ FT L P+FRSEAGSAGRDTRG++R HQF K E+V + EDS+ Sbjct: 238 VNYYRNDIIDAEKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + + ++ AE++L++L L Y V++L + D F++ KT DLEVW+ Q+ YREISSCS C Sbjct: 298 KQLQNLIHDAEDLLQKLGLPYHVITLASNDASFTSAKTNDLEVWMPAQDRYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD + K L+F HTLNGSG+AVGR + +ILENY ADGSV IP V+ PY Sbjct: 358 TDFQARRAQIRYRDDDGK-LQFVHTLNGSGLAVGRTVASILENYQQADGSVKIPDVIVPY 416 Query: 417 MNNLAVIKKEH 427 M I KE Sbjct: 417 MQGQTAITKED 427 >gi|194333565|ref|YP_002015425.1| seryl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] gi|238693328|sp|B4S6M3|SYS_PROA2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|194311383|gb|ACF45778.1| seryl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] Length = 431 Score = 396 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 166/423 (39%), Positives = 246/423 (58%), Gaps = 6/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSL---DEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +IRQNPE + L++R + L D + R ++++ ++++A RN S Sbjct: 1 MLDINFIRQNPEKVSRMLEQRQQREDIAKLNQLLDFDVRRRTMVQRTDELKALRNKVSKD 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G S D L + + +++ ++ + + +++L+ +PN E+VP G Sbjct: 61 IAVIKRSGQGS-ADDLIVQMKAVADEISGMDDTLKSLEAQIEELLLSLPNKLHEDVPEGR 119 Query: 118 S-ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +I + H ++G+ LG++DF+R K++GA F V T A LER Sbjct: 120 CADDNHIYREKLSFDHKLDFPLDNHLDLGKRLGILDFERGAKITGAGFPVYTAKGARLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL FM+D HTS +GYTEV PL V E++ GTGQ PKFAD ++ D + IPT+EV Sbjct: 180 ALINFMLDQHTSVNGYTEVLPPLFVNRESLRGTGQWPKFADQVYYMNEDNLYAIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTN++ EI+++ +PL + P FR EAGS G+DTRG LR HQF K ELV S Sbjct: 240 LTNMHRDEILDASDIPLAYAAYTPCFRREAGSYGKDTRGFLRVHQFNKVELVRYATPTTS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + + +LS AE IL+ L + YRV+ LC+GD+ +A K YD+EVW G+ + E SSCS Sbjct: 300 YDALQEILSHAEGILQALKIPYRVLLLCSGDISANATKCYDIEVWAPGEGKFLEASSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RR N RYR + + HTLNGSG+A R ++A+LENY +GS+ IP VL+P Sbjct: 360 FEDYQARRANIRYRPEDGGKPTYVHTLNGSGLATSRLMVALLENYQTPEGSIRIPDVLQP 419 Query: 416 YMN 418 Y Sbjct: 420 YTG 422 >gi|332980824|ref|YP_004462265.1| seryl-tRNA synthetase [Mahella australiensis 50-1 BON] gi|332698502|gb|AEE95443.1| seryl-tRNA synthetase [Mahella australiensis 50-1 BON] Length = 424 Score = 396 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 187/423 (44%), Positives = 270/423 (63%), Gaps = 3/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ +R+NP+ + A+ K+ + + L +DE R L+ + E++R+RRN S +I + Sbjct: 1 MLDIKLVRENPDFVKDAIAKKKDKADIDRFLEVDENRRRLLAQAEEMRSRRNDESRRIAE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L + L +++ L+ + + L+ ++ IPN+P VP+G S + Sbjct: 61 MKRRG--EDASELMADMKALSDKIKALDDQIRALDDELEAILLTIPNIPHPSVPVGDSED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N IR G+ + + H++IG+ LG++DF+ A ++SGARF+ G A LERAL Sbjct: 119 DNAEIRRWGQPRAFAFEPKAHWDIGQDLGILDFEAAARVSGARFTFYKGAGARLERALVN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNL 239 M+D+HT +HGY EV P LV +M GTGQ+PKF DD F T D + IPT+EV +TN+ Sbjct: 179 LMLDMHTRQHGYVEVFPPFLVHRRSMVGTGQLPKFEDDAFKTVDPEYFLIPTAEVPVTNM 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y I+++K LP++ + FR+EAG+AGRDTRG++RQHQF K ELV T EDS+ E Sbjct: 239 YRELILDAKDLPIKHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTLPEDSYDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ AEE+L+ L++ YRVV++CT DLGF+A K YDLEVW+ N Y EISSCS +F Sbjct: 299 EKLTHDAEEVLQALEIPYRVVAICTADLGFAAAKKYDLEVWMPSYNRYVEISSCSNFEDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR RYR + ++ HTLNGSGVA+GR AILEN+ NADG+V+IP L PYM Sbjct: 359 QARRAGIRYRPAPKEKPRYVHTLNGSGVAIGRTTAAILENFQNADGTVSIPPALVPYMGT 418 Query: 420 LAV 422 + Sbjct: 419 DKI 421 >gi|241895222|ref|ZP_04782518.1| seryl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] gi|241871528|gb|EER75279.1| seryl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] Length = 427 Score = 396 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 198/432 (45%), Positives = 268/432 (62%), Gaps = 8/432 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR E + L R + P+ + +++ D K R L+ + E+++A RN+ S QIG Sbjct: 1 MLDMKLIRHETEQVKERLATRGVAPEEVDALVADDAKRRELLVQTEELKAHRNTVSDQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + E + + L+++ + ++ PN+P + +P+G Sbjct: 61 LKKRQ--KEDASEVIAEMQKVSATIKELDEQVTALDKQIQDRALHFPNLPNKTIPVGPDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N R G+ P+ + HFEIGE LG++DF+R K+SGARF G A LERA+ Sbjct: 119 DSNREERQWGEIPTFDFTPKAHFEIGEELGILDFERGAKVSGARFVYYVGQGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLT 237 FM+D H + GY E+ P LV+DEAMYGTGQ PKF DD + T D LIPT+EV LT Sbjct: 179 NFMLDEH-QKEGYKEMITPYLVKDEAMYGTGQYPKFMDDAYRVGTNDEMTLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + E+I++ LP T L+P+FR EAGSAGRDTRG++R HQF K E+V T+ EDS+ Sbjct: 238 NYFREEVIDADKLPYSVTALSPAFRQEAGSAGRDTRGLIRMHQFNKVEMVKFTKPEDSYQ 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M AE +LK+L+L Y V++L TGD+GFSA KTYD+EVW+ QN+YREISS S Sbjct: 298 ALEDMTVNAENLLKKLNLPYHVITLSTGDMGFSAAKTYDVEVWMPQQNIYREISSVSNTE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR +YRD N K L+F HTLNGSG+AVGR + AILENY N DG+VTIP VLRPY Sbjct: 358 AFQARRARIQYRDENGK-LQFVHTLNGSGLAVGRTVAAILENYQNQDGTVTIPEVLRPYF 416 Query: 418 NNLAVIKKEHIL 429 I E L Sbjct: 417 -GADKIVPEDSL 427 >gi|315652083|ref|ZP_07905084.1| serine--tRNA ligase [Eubacterium saburreum DSM 3986] gi|315485730|gb|EFU76111.1| serine--tRNA ligase [Eubacterium saburreum DSM 3986] Length = 427 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 147/429 (34%), Positives = 227/429 (52%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+++R+NP+ + +K + + P + ++ LDEK R + +++RA+RN S + Sbjct: 1 MIDIKFLRENPDEVRQNIKNKFQDFKLPLVDEVIELDEKLRKTKVEADELRAKRNKISKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K ++L EQL LE E ++ +KK + IPN+ VPIG Sbjct: 61 IGTLMAQGKKEEAEQVKASVASLGEQLAKLEPIEADLEEKIKKDMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H EI E L +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIEKFGEPFVPDFEIPYHTEIMEKLNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCVPPFMIRSEVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + E LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTMNEEAKLPYTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R +D N F HTLN + VA R LIA LEN LN DGS+ IP VLRPY Sbjct: 360 GDAQARRLRIRVKDENGNKY-FAHTLNNTVVAPPRMLIAFLENNLNEDGSIRIPEVLRPY 418 Query: 417 MNNLAVIKK 425 M VI K Sbjct: 419 MGGKEVIGK 427 >gi|121610578|ref|YP_998385.1| seryl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] gi|166223307|sp|A1WP10|SYS_VEREI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|121555218|gb|ABM59367.1| seryl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] Length = 438 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 194/440 (44%), Positives = 267/440 (60%), Gaps = 17/440 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R++P L+ R +L+ + + L + E++++RRN S Q Sbjct: 1 MLDILLLRKDPASAIARLETRQKPQPFLNLSAFQALEAERKTLQTRTEELQSRRNQLSRQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG ++ +G+ D + + + K +L ++ + L+ ++ +PN+P + VP+G Sbjct: 61 IGISLGQGDPGSADTARAQVAASKLELAQSAARLEQIQAELQTMLEAVPNLPHDSVPVGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A+ NI +R G+ S ++H +IG LG +D D KLSGARF+V+ G +A L RA Sbjct: 121 DASGNIELRRWGQPASPAFALKDHVDIGRPLG-LDLDLGVKLSGARFAVMKGQIARLHRA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------TDG 225 L QFM+D+ T EHGYTE P V E++ GTGQ+PKF D+F T Sbjct: 180 LAQFMLDVQTGEHGYTECYVPYAVNAESLKGTGQLPKFESDLFSTKKGGQDGEPVPDNTA 239 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPTSEV LTN ++ LP+R T P FRSEAGS GRDTRGM+RQHQF K E Sbjct: 240 LYLIPTSEVPLTNFVRGLVLTEAELPIRLTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVE 299 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +V I S+ E M AE +L++L L YRV+SLCTGD+GF A KTYDLEVWL QN Sbjct: 300 MVQIVHPATSYQALEEMTGHAEALLQKLGLPYRVMSLCTGDMGFGAAKTYDLEVWLPAQN 359 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISS S C FQ+RR+ +R+++ K+ + HTLNGSG+AVGR L+A+LENY ADG Sbjct: 360 SYREISSVSNCEAFQARRLQARFKNAQGKN-EPVHTLNGSGLAVGRTLVALLENYQQADG 418 Query: 406 SVTIPTVLRPYMNNLAVIKK 425 SVTIP LRPYM +A ++ Sbjct: 419 SVTIPPALRPYMAGIAALRP 438 >gi|326403078|ref|YP_004283159.1| seryl-tRNA synthetase [Acidiphilium multivorum AIU301] gi|325049939|dbj|BAJ80277.1| seryl-tRNA synthetase [Acidiphilium multivorum AIU301] Length = 433 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 240/434 (55%), Positives = 292/434 (67%), Gaps = 13/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-------EPQSEYILSLDEKNRILIKKIEDIRARRNS 53 M D++ IR + A+++R L E + I +LDE+ R +++ RRN Sbjct: 1 MHDLKAIRDDAAAFGAAMRRRGLAGPEGADEGAAAPIRALDEERRRAQTELQGHETRRNE 60 Query: 54 NSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 + IGQA G AL+ E + L++ + E L +L++ +PNV +V Sbjct: 61 LARAIGQAKRAG--EDTTALEAEGTALRQSIETANAWLAESARKLDELLAVLPNVLDADV 118 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 P G N+ + VG PS +R+HFE+GEALGLMDF A KL+GARF+VL LA Sbjct: 119 PDGPDETANVEQKRVGAPPSFDFEARQHFELGEALGLMDFAGAAKLAGARFTVLRSDLAR 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSE 233 LERALGQFM+DLH +EHGYTEVS PLLV D MYGTGQ+PKFA+D+F TTDGRWLIPT+E Sbjct: 179 LERALGQFMLDLHVNEHGYTEVSPPLLVNDTTMYGTGQLPKFAEDLFRTTDGRWLIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTNL + EI+++ SLPLR T L PSFRSEAGSAGRDTRGMLRQHQFWK ELVS+T E Sbjct: 239 VPLTNLAAGEILDAASLPLRMTALTPSFRSEAGSAGRDTRGMLRQHQFWKVELVSLTTPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S EHERM SCAE +L+RL L YR + LC GD GFS+ KTYDLEVWL GQ YREISSC Sbjct: 299 ASADEHERMTSCAESVLERLGLPYRRMLLCAGDTGFSSAKTYDLEVWLPGQGAYREISSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 S C FQ+RRMN+RYR P + F HTLNGSGVA GR LIA++ENY NADGS+T+ Sbjct: 359 SNCRAFQARRMNARYRPPQTGPKPAKPDFVHTLNGSGVATGRALIAVMENYQNADGSITV 418 Query: 410 PTVLRPYMNNLAVI 423 P LRPYM I Sbjct: 419 PDALRPYMRGCDRI 432 >gi|186684160|ref|YP_001867356.1| seryl-tRNA synthetase [Nostoc punctiforme PCC 73102] gi|238689425|sp|B2J6K8|SYS_NOSP7 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|186466612|gb|ACC82413.1| seryl-tRNA synthetase [Nostoc punctiforme PCC 73102] Length = 426 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 191/428 (44%), Positives = 266/428 (62%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+NP+ + L R + E IL LD + R L ++AR N +GQ Sbjct: 1 MLDIKQIRENPQLVQERLNSRSGKYDIEPILQLDRQQRELEGTRSQLQARSNEIGKIVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + AL++E +++K L LE +E ++ + + +L+ +PN+P + P+G Sbjct: 61 KIKSGINSQDPEIQALRDEGNSVKATLSELEPQEKDLKAQIAQLVLALPNLPSDSTPLGK 120 Query: 118 SANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +N+ +R + H+EIGE LG+++ +RA K++ +RF L G A LER Sbjct: 121 NEEDNVEVRRWGDEYIPQNPNILPHWEIGEKLGILNVERAVKVAQSRFVALVGAGAALER 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVS 235 AL QFM+ LHT + GY EVS PLLV E++ TGQ+PKFA++ F C D WLIPT+EV Sbjct: 181 ALIQFMLTLHT-QAGYLEVSPPLLVNTESLTATGQLPKFAEESFKCADDDLWLIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLY EI+ ++ LP+ P FR EAGS GRD RG++R HQF K E+V S Sbjct: 240 VTNLYRGEILAAEDLPIYHCAFTPCFRREAGSYGRDMRGLIRLHQFNKVEMVKFVEPSTS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 F E E+++ AE IL+ L L YRVV+L TGDLGF++ KTYDLEVWL YREISSCS Sbjct: 300 FDELEKLVGNAEAILQALRLPYRVVNLSTGDLGFASTKTYDLEVWLPSSGKYREISSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR + R+++ K +F HTLNGSG+AVGR + AILENY DG+V IP L+P Sbjct: 360 TIDFQARRADIRFKEAGKKGTQFVHTLNGSGLAVGRTMAAILENYQQPDGTVKIPEALQP 419 Query: 416 YMNNLAVI 423 Y+ V+ Sbjct: 420 YL-GREVL 426 >gi|284052154|ref|ZP_06382364.1| seryl-tRNA synthetase [Arthrospira platensis str. Paraca] gi|291568222|dbj|BAI90494.1| seryl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 431 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 196/434 (45%), Positives = 264/434 (60%), Gaps = 14/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+NP+ + L +R E IL LDEK R L ++ + R N +G+ Sbjct: 1 MLDIKLIRENPQEIQQRLNRRG-NYDLEAILELDEKRRELEQQRIQLETRSNEIGKLVGE 59 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + AL+ E +K QL LE +E ++ S + L+ +PN+P + P G Sbjct: 60 KIKSGTDPKGPEIQALREEGQQIKSQLSDLEPQEKDLESQITSLLLPLPNLPSDTTPEGK 119 Query: 118 SANENILIRSVGKKPS-AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 S EN+ +R G + H+EIGE LG+++F+R K++ +RF L G A LER Sbjct: 120 SEAENVEVRRWGDEYKLPNTDILPHWEIGEKLGILNFERGVKIAQSRFVSLVGAGAALER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVS 235 AL QFM+D HT +GY EV PLLV ++ TGQ+PKFA++ F C D WLIPTSEV Sbjct: 180 ALVQFMLDTHT-ANGYLEVIPPLLVNSISLTATGQLPKFAEESFKCADDDLWLIPTSEVP 238 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 + NLY EI+E + LP+ + P FR EAGS G+DTRG++R HQF K ELV + + S Sbjct: 239 VVNLYRDEILEGEQLPIYHCSFTPCFRREAGSYGKDTRGLIRLHQFNKVELVKLVHPDTS 298 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EHE++++ AE IL+ L L YRV+ LCTGDLGF+A K YDLEVWL YREISSCS Sbjct: 299 ELEHEKLVADAEGILQALKLPYRVIELCTGDLGFAAAKCYDLEVWLPSAGTYREISSCSN 358 Query: 356 CGNFQSRRMNSRYRDPNSKS------LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 +FQ+RR N R+R+ +F H LNGSG+AVGR + A+LENY DGSV + Sbjct: 359 VKDFQARRANIRFREAKGDPKKKKKKTEFVHALNGSGLAVGRTMAAVLENYQQPDGSVKV 418 Query: 410 PTVLRPYMNNLAVI 423 P VL+PY+ V+ Sbjct: 419 PEVLQPYL-GREVL 431 >gi|227431355|ref|ZP_03913408.1| seryl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352948|gb|EEJ43121.1| seryl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 435 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 193/436 (44%), Positives = 275/436 (63%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R+N + L+ R + P+ + +L LD+K R LI+K+E ++A+RN S +I Sbjct: 1 MLDIRYMRKNSAEVKQRLEYRGVNPETIDELLELDQKRRDLIQKVESLKAQRNDVSDKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + + + + + E+ + ++++ + +PN+ +VP+G Sbjct: 61 FAKRQ--KEDASDAILQMKQVGADIKSFDNEQTLLDEQVREIAAHLPNMAAVDVPVGPDE 118 Query: 120 NENILIRSV--------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 + N+ R + H+EIGE LG++DF+R K+SGARF G Sbjct: 119 SANVEQRKWDPEEYGSRPHALEEASWVKAHYEIGENLGILDFERGAKVSGARFLYYVGDG 178 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIP 230 A LERA+ FM+D H + GYTE+ P++V D AM+GTGQ PKF DD + + IP Sbjct: 179 ARLERAVYNFMLDEH-RQEGYTEMITPIVVNDSAMFGTGQYPKFQDDAYRVEGLNQTYIP 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV LTN YS E + S+ LP++FT L+PSFR EAGSAG+DTRG++R HQF K E+V T Sbjct: 238 TAEVPLTNYYSGEELPSEDLPIKFTALSPSFRKEAGSAGKDTRGLIRLHQFNKVEMVKFT 297 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + EDS+ E E+M AE IL++L+L Y V+ L TGD+GFSA KTYD+EVW+ QN+YREI Sbjct: 298 KPEDSYEELEKMTLDAENILQKLNLPYHVIVLSTGDMGFSAAKTYDIEVWMPQQNVYREI 357 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SS S +FQ+RRM+ YRD ++K L+ HTLNGSG+AVGR + AILENY N DGSVTIP Sbjct: 358 SSVSNTEDFQARRMHITYRDADNK-LQLVHTLNGSGLAVGRTVAAILENYQNEDGSVTIP 416 Query: 411 TVLRPYMNNLAVIKKE 426 VLRPY+ ++ Sbjct: 417 EVLRPYLGGQEKLEPT 432 >gi|294507878|ref|YP_003571936.1| seryl-tRNA synthetase [Salinibacter ruber M8] gi|294344206|emb|CBH24984.1| seryl-tRNA synthetase [Salinibacter ruber M8] Length = 428 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 158/421 (37%), Positives = 239/421 (56%), Gaps = 4/421 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD+ +R +P + AL+ + + + +L +DE R I +++D+++R+N S QI Sbjct: 1 MLDLDTVRNDPRRVKEALRAKGIGSPDLVDTLLKVDETRRSAITELQDVQSRQNELSQQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G EG +A+ +T +KE++ L++E E + ++L+ +PN+P VP+G Sbjct: 61 GALKREGKDEEAEAIIEKTGRMKEKINRLKEEVQEAEARQEELVLELPNIPHPSVPVGAD 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N + ++G+ P+ H+E+ + L+D +R K++G+ F G A L+RAL Sbjct: 121 EDDNEVEETIGEPPAFDFNPAPHWELADRHNLVDLERGAKVAGSGFPFYLGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLT 237 F +D E GYTE+ APL V E+ GTGQ+P M+ + IPT+EV +T Sbjct: 181 LNFFLDR-ARERGYTEMQAPLFVNPESAKGTGQLPDKDALMYEIPRDDFYPIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + EI+ + LP R+ T +P +R EAGS G D RG+ R HQF K ELV I ++S+ Sbjct: 240 NFHRDEILAADDLPRRYCTYSPCWRREAGSYGSDVRGLNRLHQFDKVELVRIVPPDESYR 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + +L AE L LDL YR + +CTGD+GF+ K YDLEVW A Q + E+SS S Sbjct: 300 ALDALLEDAESALDALDLPYRRLLMCTGDMGFTQAKVYDLEVWSAAQERWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RYR + HTLNGSG+A R + A+LEN DGS+ +P L PY Sbjct: 360 AFQARRAQIRYRPEPEAKPELVHTLNGSGLAFPRIVAALLENNQQPDGSIELPEALHPYT 419 Query: 418 N 418 Sbjct: 420 G 420 >gi|37520285|ref|NP_923662.1| seryl-tRNA synthetase [Gloeobacter violaceus PCC 7421] gi|46577178|sp|Q7NMP9|SYS_GLOVI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|35211278|dbj|BAC88657.1| seryl-tRNA synthetase [Gloeobacter violaceus PCC 7421] Length = 429 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 198/422 (46%), Positives = 257/422 (60%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD + +R +P L L R + E +++LD + R +A N Q+ Sbjct: 1 MLDPKLLRDDPAKLIERLNTRGGDFTEVIEQLVALDSQRRASQTAFNRAQAEGNQIGKQV 60 Query: 59 GQAIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 G+ + G V ALK LK L +L+ +E E+ L+ +PNVP EVPI Sbjct: 61 GERLRRGTAVGDPEVLALKQRGIDLKATLALLQDQERELAERFAALLPTLPNVPRPEVPI 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G N+N +R G P H+++GE LGLM+F RAT ++ ARF L G A LE Sbjct: 121 GKDENDNREMRFWGTPPIFDFEPAAHWDLGERLGLMNFARATLVAQARFVTLMGDGALLE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEV 234 RAL FM+D H HGY E+ P LV +M GTGQ+PKFA+D F C D WLIPT+EV Sbjct: 181 RALIAFMLDRH-RAHGYIEILPPYLVNTASMTGTGQLPKFAEDSFRCRDDDLWLIPTAEV 239 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNLY EI+ LP+ P FR EAGS GRDTRG++R HQF K ELV R E Sbjct: 240 PVTNLYRDEILTDMQLPIHHCAFTPCFRREAGSYGRDTRGLIRLHQFHKVELVKFCRPEH 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S TEHE++++ AE++L++L+L YRV+ LCTGDLGF A + +DLEVWL QN YREISSCS Sbjct: 300 SPTEHEKLVADAEDVLQQLELPYRVIELCTGDLGFGAARCFDLEVWLPSQNRYREISSCS 359 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR N R++ P+ K +F HTLNGSG+AVGR AILENY N DG+V +P L+ Sbjct: 360 NFEDFQARRANLRFKAPDKKGTEFVHTLNGSGLAVGRTFAAILENYQNRDGTVRVPEALK 419 Query: 415 PY 416 PY Sbjct: 420 PY 421 >gi|113477024|ref|YP_723085.1| seryl-tRNA synthetase [Trichodesmium erythraeum IMS101] gi|122964624|sp|Q10YR2|SYS_TRIEI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|110168072|gb|ABG52612.1| seryl-tRNA synthetase [Trichodesmium erythraeum IMS101] Length = 425 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 199/428 (46%), Positives = 270/428 (63%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+NP+ + LK+R E + I+ LDEK R L + ++AR N Q+G+ Sbjct: 1 MLDIRQIRENPQIVQELLKRRG-EYDLQPIIELDEKQRQLETERSQLQARSNQVGKQVGE 59 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + + ALK E + +K +L LE EE E+ + ++ L+ +PN+P E PIG Sbjct: 60 KIKSGSDPKGTEIKALKEEGNKVKAKLSELEPEEKELKAKIEALLLPLPNLPSESTPIGK 119 Query: 118 SANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 S ENI ++ + H+EIGE LG+MDF+R K++ +RF L G A LER Sbjct: 120 SEAENIEVKRWGDEYIPQNPKIIPHYEIGEKLGIMDFERGVKIAQSRFVALMGAGAALER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVS 235 A+ QFM+ H GY EV APLLV +++ TGQ+PKFA++ F C D WLIPTSEVS Sbjct: 180 AIIQFMLKRHIQV-GYVEVMAPLLVNSQSLTATGQLPKFAEESFKCAADDLWLIPTSEVS 238 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 NLY EI+ ++ LP+ P FR EAG+ G+DTRG++R HQF K E+V I E S Sbjct: 239 TMNLYRDEILSAEQLPIYHCAFTPCFRREAGAYGKDTRGLIRLHQFNKVEMVKIVHPETS 298 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++++ AE IL+ L L YR++ LC+GDLGFSA K YDLEVWL YREISSCS Sbjct: 299 EEEHQKLVADAEAILQALKLPYRILELCSGDLGFSAAKCYDLEVWLPSSGTYREISSCSN 358 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR N R+++ N K ++ H LNGSG+AVGR + AILENY DGSV +P VL+P Sbjct: 359 VKDFQARRANIRFKERNKKGTQYVHALNGSGLAVGRTMAAILENYQQVDGSVKVPEVLQP 418 Query: 416 YMNNLAVI 423 YM + Sbjct: 419 YM-GREFL 425 >gi|330984183|gb|EGH82286.1| seryl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 425 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 179/428 (41%), Positives = 263/428 (61%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +RQ+P ++ AL +R + +L+ + +++ E +A RN+ + +IGQ Sbjct: 1 MLDPKLLRQDPIAVEAALSRRG-PVSLDEYTTLESRRKLVQAAAEGFQAERNARAKEIGQ 59 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + + + + + ++ + +PN+P E VP G + Sbjct: 60 AKRAGQ--DIAQLMTDDARAQAHYRDAQDDLKAIQERMEAIAMALPNLPDESVPDGVDES 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI +R G+ + + +H ++GE L MDF +LSGARF VL H+A L RAL Q Sbjct: 118 DNIEVRRWGQPRAFGFVPVDHVKLGEDLAGMDFTAGAELSGARFVVLKRHIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSL 236 FM+D H HGY EV P LV +A+ GTGQ+PKF +D+F +LIPT+EV+L Sbjct: 178 FMLDYHVDHHGYQEVYTPYLVGAQALRGTGQLPKFEEDLFKVARHGQADLYLIPTAEVTL 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL + +I+ LP++ T P FRSEAG++GRDTRG++RQHQF K E+V I ++S Sbjct: 238 TNLVADKILNEHDLPIKMTAHTPCFRSEAGASGRDTRGLIRQHQFDKVEMVQIAHPDNSM 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + M AE+IL+ L+L YRVV LC GD+GFSA KT+D+EVW+ Q YREISSCS C Sbjct: 298 EALDSMTGHAEKILQLLELPYRVVQLCAGDIGFSAVKTFDIEVWVPSQEKYREISSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR+ +R+RD ++ HTLNGSG+AVGR L+A+LEN+ +G + IP LRPY Sbjct: 358 GDFQARRLQARFRDTSTGKTSLVHTLNGSGLAVGRTLVALLENHQKENGRINIPAALRPY 417 Query: 417 MNNLAVIK 424 + +I Sbjct: 418 LGLAELIP 425 >gi|78186477|ref|YP_374520.1| seryl-tRNA synthetase [Chlorobium luteolum DSM 273] gi|123583337|sp|Q3B5A4|SYS_PELLD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|78166379|gb|ABB23477.1| seryl-tRNA synthetase [Chlorobium luteolum DSM 273] Length = 430 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 169/430 (39%), Positives = 256/430 (59%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +IRQNPE + L R EP+ + +L +D + R L++K ++++A RN+ S + Sbjct: 1 MLDINYIRQNPEEVATMLHDRQLQGDEPKLQRLLFIDTERRTLVQKTDELKALRNTRSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G+ S D L + + E++ L+ + +++++ +PN VP+G Sbjct: 61 IAELKKSGSGS-ADQLIADMQAVGEEIAGLDSRLSALNMEMEEILLALPNRLDPSVPVGR 119 Query: 118 SANEN-ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 +A +N + V + H E+G+ALG++DF+R K++GA F V G A LER Sbjct: 120 TAEDNLVFGEPVHFPHPLEFDVKNHLELGKALGILDFERGAKVTGAGFPVYVGKGARLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVS 235 AL FM+D HT EHGYTEV P LV +++ GTGQ PKFAD + D + IPT+EV Sbjct: 180 ALINFMLDRHTEEHGYTEVFPPFLVNRDSLRGTGQWPKFADQVYHMEEDELYAIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNL+ E++ +++LP+ + + FR EAGS G+DTRG LR HQF K E+V TR E+S Sbjct: 240 VTNLHRDEMLSAEALPISYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEES 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E + AE IL L++ YRV+ LC+GD+ +A K YD+EVW + Y E SSCS Sbjct: 300 YAALETIRGHAEAILCALEIPYRVLLLCSGDISANAAKCYDIEVWSPAERKYLEASSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RR N R++ +F HTLNGSG+A R +++I+E+Y +G + +P VL P Sbjct: 360 FEDYQARRANIRFKADGKSKPEFVHTLNGSGLATSRLMVSIIEHYQTLEGGIRVPEVLVP 419 Query: 416 YMNNLAVIKK 425 Y + I Sbjct: 420 YT-GFSQISP 428 >gi|83815326|ref|YP_445967.1| seryl-tRNA synthetase [Salinibacter ruber DSM 13855] gi|123528514|sp|Q2S1G4|SYS_SALRD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|83756720|gb|ABC44833.1| seryl-tRNA synthetase [Salinibacter ruber DSM 13855] Length = 428 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 160/421 (38%), Positives = 239/421 (56%), Gaps = 4/421 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD+ +R +P + AL+ + + + +L +DE R I +++D+++R+N S QI Sbjct: 1 MLDLDTVRNDPRRVKEALRAKGIGSPDLVDTLLEIDETRRSAITELQDVQSRQNELSQQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G EG +A+ +T +KE++ L++E E + ++L+ +PN+P VP+G Sbjct: 61 GALKREGKDEEAEAIIEKTGRMKEKINRLKEEVQEAEARQEELVLELPNIPHPSVPVGAD 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N + +VG+ P+ H+E+ + L+D +R K++G+ F G A L+RAL Sbjct: 121 EDDNEVEATVGEMPAFDFDPAPHWELADRHNLVDLERGAKVAGSGFPFYLGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLT 237 F +D E GYTE+ APL V E+ GTGQIP M+ + IPT+EV +T Sbjct: 181 LNFFLDR-ARERGYTEMQAPLFVNPESAKGTGQIPDKDALMYEIPRDDFYPIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + EI+ + LP R+ T +P +R EAGS G D RG+ R HQF K ELV I ++S+ Sbjct: 240 NFHRDEILAADDLPRRYCTYSPCWRREAGSYGSDVRGLNRLHQFDKVELVRIVPPDESYR 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + +L AE L LDL YR + +CTGD+GF+ K YDLEVW A Q + E+SS S Sbjct: 300 ALDALLEDAESALDALDLPYRRLLMCTGDMGFTQAKVYDLEVWSAAQERWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RYR + HTLNGSG+A R + A+LEN DGS+ +P L PY Sbjct: 360 AFQARRAQIRYRLEPEAKPELVHTLNGSGLAFPRIVAALLENNQQPDGSIELPEALHPYT 419 Query: 418 N 418 Sbjct: 420 G 420 >gi|295688845|ref|YP_003592538.1| seryl-tRNA synthetase [Caulobacter segnis ATCC 21756] gi|295430748|gb|ADG09920.1| seryl-tRNA synthetase [Caulobacter segnis ATCC 21756] Length = 479 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 216/475 (45%), Positives = 285/475 (60%), Gaps = 52/475 (10%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP+ D + + + LD + R +++ +A+RN +S IG Sbjct: 1 MHDIKAIRDNPKAFDRQWSAKGRSGAAAEAVKLDAQLRAAQTALQEAQAKRNESSKLIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+ + + L E TLK + +EE V LK L++ +PN+P EVP+G Sbjct: 61 AKAKKDEAEAQRLMAEVETLKGVMATASEEEALVGGKLKDLLASLPNIPAPEVPVGEDEA 120 Query: 121 ENILIRSVGKKPSAI----HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 N+ R G + ++H ++G ALG MDF+ A ++SGARF VL +A LER Sbjct: 121 GNVEQRRWGDAAKLPAGKLNKPKDHVDLGAALGGMDFEAAARMSGARFVVLKKEIARLER 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------------- 222 A+GQFM+DL T EHGYTE+S PLLVRDEA++GTGQ+PKF DD+F T Sbjct: 181 AIGQFMLDLQTVEHGYTEISPPLLVRDEALFGTGQLPKFEDDLFFTGNVTEVERGVTEAL 240 Query: 223 ----------------------------------TDGRWLIPTSEVSLTNLYSHEIIESK 248 RWLIPT+EVSLTN+ +++ + Sbjct: 241 AYLDQHQPVAEGSSLASQIAEQNELRGIRELVLKHSRRWLIPTAEVSLTNIVREQLVAEE 300 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LP+R T L PSFR+EAGSAGRDTRGM+RQHQF+K ELVSIT + S EH+RM+ CAE Sbjct: 301 ELPMRLTALTPSFRAEAGSAGRDTRGMIRQHQFYKVELVSITTPDQSEAEHQRMVECAET 360 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 +LK+L+L +R + LCTGD+GF A KTYDLEVWL Q++YREISSCS CG FQ+RRM +RY Sbjct: 361 VLKKLELPFRTMLLCTGDMGFGARKTYDLEVWLPSQDMYREISSCSNCGEFQARRMEARY 420 Query: 369 RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 R K F HTLNGSG+AVGR L+A+LENY + G + IP VL+PYM + I Sbjct: 421 RKTGEKGGHFVHTLNGSGLAVGRTLVAVLENYQDEGGRIHIPAVLQPYMGGITHI 475 >gi|218247950|ref|YP_002373321.1| seryl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|226701390|sp|B7JY63|SYS_CYAP8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|218168428|gb|ACK67165.1| seryl-tRNA synthetase [Cyanothece sp. PCC 8801] Length = 427 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 189/423 (44%), Positives = 265/423 (62%), Gaps = 7/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ IR+NP+++ L +R E IL D + R + ++AR N I Sbjct: 1 MLDLKQIRENPDYIQELLNRRSASNEYDLTPILDRDRQQRDIEATRTQLQARSNEIGKLI 60 Query: 59 GQAIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 GQ + G + ALK E + LK QL LE +E ++ S ++ L+ +PN+P E P+ Sbjct: 61 GQKMKSGINPQSEEIQALKTEGNDLKTQLSELEPQEKQLKSEIEALLLQLPNLPSESTPL 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G S +N+ +R G + H+EI E LG+++ +RA K++ +RF L G A LE Sbjct: 121 GKSEADNVEVRRWGDEYLPKIEVLPHWEIAERLGILEVERAVKIAQSRFIALVGAGAALE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEV 234 RAL FM+D GY EV P+L+ +++ GTGQ+PKFA++ F C+ D WL PT+EV Sbjct: 181 RALINFMLDCQI-NAGYLEVIPPVLINSDSLQGTGQLPKFAEESFKCSEDDLWLAPTAEV 239 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNLY EI+E++ LP++ P FR EAGS G+DTRG++R HQF K ELV + E Sbjct: 240 PVTNLYRDEIVEAEQLPIKHCAYTPCFRREAGSYGKDTRGLIRLHQFNKVELVKLVHPET 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S EH+ +++ AE IL+ L L YRV+ LCTGDLGF A K YDLEVWL YREISSCS Sbjct: 300 SEAEHQSLVNNAEAILQALKLPYRVLELCTGDLGFGATKCYDLEVWLPSSGTYREISSCS 359 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 CG+FQ+RR N R ++ K ++ HTLNGSG+AVGR + AILENY ++G+V +P VL+ Sbjct: 360 NCGDFQARRANIRLKEKGKKGTQYVHTLNGSGLAVGRTMAAILENYQQSNGTVKVPDVLQ 419 Query: 415 PYM 417 PY+ Sbjct: 420 PYL 422 >gi|195952750|ref|YP_002121040.1| seryl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] gi|229890220|sp|B4U7F1|SYS_HYDS0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|195932362|gb|ACG57062.1| seryl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 421 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 192/422 (45%), Positives = 281/422 (66%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+ I+ IR+NPE++ L KR L+ + + IL LDE+ R IK+IED+RA RN+ S +I Sbjct: 1 MISIELIRKNPEYVKENLAKRDMFLKDRIDDILKLDEERRHKIKRIEDLRALRNAKSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +G + ++L+ E +KE++ LE+E + + L+ +PN+ E VP G Sbjct: 61 GSLKKQGLNT--ESLEEEIRLIKEEISKLEEELARIEKYTEDLLLRVPNLLHESVPYGKD 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+N+ I+ G+ P ++H ++G G +DFD+AT +SG+RFS+L G LA LERAL Sbjct: 119 ENDNVEIKRWGEIPKFDFGIKDHADLGVLRGFIDFDQATAISGSRFSILKGPLAKLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 FM++++ ++GY E+ P LV+ + + GTGQ+PKF ++++ D +LIPT+EV L Sbjct: 179 INFMLEINA-KNGYQEMIVPHLVKPQTLVGTGQLPKFQEELYYVKDDDLYLIPTAEVPLV 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ I++ LP+ T P +R EAGS G+D +G++RQHQF K ELV I + S+ Sbjct: 238 NVFKDTILKEDDLPINLTAYTPCYRREAGSHGKDVKGLIRQHQFDKVELVKIVHPDSSYD 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ER+LS AEEIL+ L+L YRVV+LC+GD+GFSA KTYD+EVW+ QN YREISSCS C Sbjct: 298 ELERLLSNAEEILQLLELPYRVVALCSGDIGFSASKTYDIEVWIPSQNKYREISSCSNCE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N R++D K+ +F HTLNGS +AVGR L+AI+ENY D + IP VL+ Y+ Sbjct: 358 DFQARRANMRFKDKTGKN-RFVHTLNGSSLAVGRTLVAIMENYQTKDHKIRIPKVLKDYI 416 Query: 418 NN 419 Sbjct: 417 KG 418 >gi|257060727|ref|YP_003138615.1| seryl-tRNA synthetase [Cyanothece sp. PCC 8802] gi|256590893|gb|ACV01780.1| seryl-tRNA synthetase [Cyanothece sp. PCC 8802] Length = 427 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 190/423 (44%), Positives = 265/423 (62%), Gaps = 7/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ IR+NPE++ L +R E IL D + R + ++AR N I Sbjct: 1 MLDLKQIRENPEYIQELLNRRSASNEYDLTPILDRDRQQRDIEATRTQLQARSNEIGKLI 60 Query: 59 GQAIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 GQ + G + ALK E + LK QL LE +E ++ S ++ L+ +PN+P E P+ Sbjct: 61 GQKMKSGINPQSEEIQALKTEGNDLKTQLSELEPQEKQLKSEIEALLLQLPNLPSESTPL 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G S +N+ +R G + H+EI E LG+++ +RA K++ +RF L G A LE Sbjct: 121 GKSEADNVEVRRWGDEYLPKIEVLPHWEIAERLGILEVERAVKIAQSRFIALVGAGAALE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEV 234 RAL FM+D GY EV P+L+ +++ GTGQ+PKFA++ F C+ D WL PT+EV Sbjct: 181 RALINFMLDCQI-NAGYLEVIPPVLINSDSLQGTGQLPKFAEESFKCSEDDLWLAPTAEV 239 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNLY EI+E++ LP++ P FR EAGS G+DTRG++R HQF K ELV + E Sbjct: 240 PVTNLYRDEIVEAEQLPIKHCAYTPCFRREAGSYGKDTRGLIRLHQFNKVELVKLVHPET 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S EH+ +++ AE IL+ L L YRV+ LCTGDLGF A K YDLEVWL YREISSCS Sbjct: 300 SEAEHQSLVNNAEAILQALKLPYRVLELCTGDLGFGATKCYDLEVWLPSSGTYREISSCS 359 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 CG+FQ+RR N R ++ K ++ HTLNGSG+AVGR + AILENY ++G+V +P VL+ Sbjct: 360 NCGDFQARRANIRLKEKGKKGTQYVHTLNGSGLAVGRTMAAILENYQQSNGTVKVPDVLQ 419 Query: 415 PYM 417 PY+ Sbjct: 420 PYL 422 >gi|300710201|ref|YP_003736015.1| seryl-tRNA synthetase [Halalkalicoccus jeotgali B3] gi|299123884|gb|ADJ14223.1| seryl-tRNA synthetase [Halalkalicoccus jeotgali B3] Length = 457 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 173/444 (38%), Positives = 256/444 (57%), Gaps = 21/444 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R++PE + AL + ++ + +L++DE+ R L + + +R RN S++IG+ Sbjct: 1 MLDRSILREDPERVRWALDVKGVDVDLDEVLAVDEEWRELKAEGDSLRHERNEVSSEIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G +S LK +L LE E+ L++ + +P +P E VP+G + Sbjct: 61 LKQAGEEEKAQQAIERSSELKAELQDLEDRADELEGRLEEALLELPQIPHESVPVGEDED 120 Query: 121 ENILIRS--VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ H++IGE L L+DF+R K++G + + G A LE AL Sbjct: 121 DNVERYREGFSDLRDLPEEIVPHYDIGEELDLLDFERGAKVTGGGYQFVKGDGARLEHAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLI 229 QFM+D+H E YT+V P+ V +M GTGQ+PKFA+D + D WL+ Sbjct: 181 IQFMLDVH-REQSYTDVFPPIPVNSASMRGTGQLPKFAEDAYRVGARQEDTYDDDDLWLL 239 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+Y EI+ + LPL+ P+FR EAG G +TRG +R HQF K ELV+ Sbjct: 240 PTAEVPVTNMYRDEILLDEDLPLKHQAFTPNFRREAGEHGTETRGYVRVHQFNKVELVNF 299 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ----- 344 R E+S+ E +L+ AEE+LKRL+L YRV+ +CTGD+GF+ K YD+EVW G Sbjct: 300 VRPEESYDRLEGLLTEAEEVLKRLELPYRVLDMCTGDMGFTQAKKYDIEVWAPGDDMAEG 359 Query: 345 ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + E+SS S FQ+RR ++R + + ++ HTLNGSGVAV R ++AILE Y Sbjct: 360 PEEGGRWLEVSSVSNFEAFQARRAGIQFRPEHHEPAQYLHTLNGSGVAVPRVMVAILEYY 419 Query: 401 LNADGSVTIPTVLRPYMNNLAVIK 424 N DG++T+P LRPYM AVI+ Sbjct: 420 QNEDGTITVPEALRPYMGGQAVIE 443 >gi|225378561|ref|ZP_03755782.1| hypothetical protein ROSEINA2194_04229 [Roseburia inulinivorans DSM 16841] gi|225209609|gb|EEG91963.1| hypothetical protein ROSEINA2194_04229 [Roseburia inulinivorans DSM 16841] Length = 429 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 138/431 (32%), Positives = 224/431 (51%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+D++++R+NPE + +K + + P + ++ LD K R K+ +++RA RN+ S Q Sbjct: 1 MIDLKFLRENPEIVKQNIKNKFQDQKLPLVDEVIELDAKARATQKEADELRASRNTLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + +G +A+K + S +L LE+ E E+ + K++ IPN+ VPIG Sbjct: 61 IGQLMGQGKKEEAEAVKAQVSANAARLAELEETEKELQEKVTKIMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N+ I G+ H +I + +D D A K++G F L G +A + A Sbjct: 121 DDSCNVEIEKFGEPVVPDFEIPYHTDIMDRFDGIDLDAAGKVAGNGFYYLMGDIARIHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCVPPFMIRSNVVTGVMSFDEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I + + LP T+ +P FR E G+ G + RG+ R HQF K E++ + R E+S Sbjct: 240 IGKFIDTINDEEKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCRPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 VWYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 GDAQARRLKIRVKGKDGNKY-FAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPKALQPY 418 Query: 417 MNNLAVIKKEH 427 M + I +H Sbjct: 419 MGGIEKIVPKH 429 >gi|218961936|ref|YP_001741711.1| seryl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] gi|167730593|emb|CAO81505.1| seryl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] Length = 419 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 179/419 (42%), Positives = 257/419 (61%), Gaps = 4/419 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++IR N E + A+ ++ + + +L +DE+ R L + + ++A +NS SA I Q Sbjct: 1 MLDIKFIRNNIELVRQAISNKNEKADLDKLLEIDEQRRQLQFEFDYLKAHQNSVSALIAQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + LK + E++ L + V L+KL+ IPN+P E+VP+G + Sbjct: 61 KKKTGENIE-NELKA-MTKTAEEIKALSAQLSIVNGELEKLLLTIPNIPQEDVPVGKDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+ G+ ++H E+ L+D R K+SG+ F + TG A +ERAL Sbjct: 119 ANKIIKIWGEPKQFSFTPKDHLELAIQNKLLDLPRGAKISGSGFPLYTGEGARIERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 FM++ H +H YTE+ AP++V + M GTGQ+PK +DM+ D +LIPT+EV +TN+ Sbjct: 179 FMLEFHLQKHNYTELMAPVIVNRKTMTGTGQLPKLEEDMYRIEKDDLFLIPTAEVPVTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ E++ K LP +F P FR EAGS G++T+G+ R HQF K ELV T E S Sbjct: 239 FADEVLSYKDLPQKFVAYTPCFRREAGSYGKETKGLQRLHQFNKVELVHFTEPEKSAEAL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++LS AE+IL+ +LHYRVV+LCTGDL F++ KTYDLEVW G Y E+SS ST G F Sbjct: 299 EQILSDAEDILQAFNLHYRVVALCTGDLSFASQKTYDLEVWAPGTGKYLEVSSVSTFGEF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RR N RY+D K +K HTLNGSGVA R LIAI E Y DG++ +P VL P++ Sbjct: 359 QARRANIRYKDKTGK-VKHLHTLNGSGVATPRLLIAIWETYQQEDGTIKLPAVLDPFLG 416 >gi|170078923|ref|YP_001735561.1| seryl-tRNA synthetase [Synechococcus sp. PCC 7002] gi|238689047|sp|B1XJM0|SYS_SYNP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|169886592|gb|ACB00306.1| seryl-tRNA synthetase [Synechococcus sp. PCC 7002] Length = 427 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 189/423 (44%), Positives = 264/423 (62%), Gaps = 7/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R+NP + L R E + IL LD + R L ++AR N IG Sbjct: 1 MLDIKLLRENPTLVQERLDARKAGEYAIQPILDLDIQQRTLEGDRSQLQARSNEIGKLIG 60 Query: 60 QAIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 Q I G + LK E + +K++L LE +E E+ + + L+ +PN+P + P+G Sbjct: 61 QKIKGGADPKGEEIATLKAEGNEIKQKLADLEPQEKELKAQIYNLLLALPNLPDQSTPVG 120 Query: 117 TSANENILIRSVGKKPSA-IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 T+ EN+ +R G+ H+EIGE LG+++F R+ K++ +RF L G A LE Sbjct: 121 TNETENVEVRRWGEAHKPTNENILPHWEIGEQLGILEFARSVKVAQSRFVSLVGAGAALE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEV 234 RAL FM+D GY EV P+L+ +++ GTGQ+PKFA++ F C D WL PT+EV Sbjct: 181 RALINFMLDQQI-AAGYVEVMPPVLINSDSLTGTGQLPKFAEESFRCADDDLWLTPTAEV 239 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNLY +EI+E+++LP+ P FR EAGS G+DTRG++R HQF K ELV E Sbjct: 240 PVTNLYRYEILEAENLPIYHCAYTPCFRREAGSYGKDTRGLIRLHQFNKVELVKFVHPET 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S EHE++++ AE IL+ L L YRV+ LC+GDLGFSA K YDLEVWL + YREISSCS Sbjct: 300 SAAEHEKLVANAEAILQALKLPYRVLELCSGDLGFSAGKCYDLEVWLPSADTYREISSCS 359 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR R+++ K +F HTLNGSG+A+GR + AILENY +G+V +P VLR Sbjct: 360 NFYDFQARRAGIRFKEAGKKGTQFVHTLNGSGLAIGRTMAAILENYQQPNGTVAVPEVLR 419 Query: 415 PYM 417 PY+ Sbjct: 420 PYL 422 >gi|119510137|ref|ZP_01629276.1| tRNA synthetase, class II (G, H, P and S) [Nodularia spumigena CCY9414] gi|119465198|gb|EAW46096.1| tRNA synthetase, class II (G, H, P and S) [Nodularia spumigena CCY9414] Length = 455 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 196/427 (45%), Positives = 270/427 (63%), Gaps = 7/427 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LDI+ IR+NP+ + L R + E IL LD++ R L ++AR N +GQ Sbjct: 31 LDIKQIRENPQLIQERLNSRSGKYDIEPILQLDKQQRELEGTRSQLQARSNEIGKLVGQK 90 Query: 62 IAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 I G + AL++E +++K QL LE +E + + +++L+ +PN+P E P GTS Sbjct: 91 IKSGTDPQSPEIQALRDEGNSVKAQLSELEPQEKALKAEIEQLVLALPNLPSEFTPFGTS 150 Query: 119 ANENILIRSVGKKP-SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N +R G + H+EIGE +G+++F+RA K++ +RF L G A LERA Sbjct: 151 EDDNQEVRRWGDEYLPQNPKIIPHWEIGEKMGILNFERAVKVAQSRFVTLVGAGAALERA 210 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L QFM+ T E GY EVS PLLV +A+ GTGQ+PKFA++ F C D WLIPT+EV + Sbjct: 211 LIQFMLKTQT-EAGYVEVSPPLLVNTDALTGTGQLPKFAEESFKCADDELWLIPTAEVPV 269 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY EI+ ++ LP+ P FR EAGS GRD RG++R HQF K ELV + SF Sbjct: 270 TNLYRGEILAAEELPIYHCAYTPCFRREAGSYGRDMRGLIRLHQFNKVELVKVVHPSSSF 329 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E E+++ AE IL+ L L YRV++LCT DLGF A KTYDLEVWL YREISSCS C Sbjct: 330 EELEKLVVNAEAILQALKLPYRVINLCTADLGFGATKTYDLEVWLPSSGKYREISSCSNC 389 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + R+++ K +F HTLNGSG+AVGR + AILENY DG++ +P VL+PY Sbjct: 390 VDFQARRADIRFKEAGKKGTQFVHTLNGSGLAVGRTMAAILENYQQPDGTIKVPAVLQPY 449 Query: 417 MNNLAVI 423 + V+ Sbjct: 450 L-GREVL 455 >gi|298491543|ref|YP_003721720.1| seryl-tRNA synthetase ['Nostoc azollae' 0708] gi|298233461|gb|ADI64597.1| seryl-tRNA synthetase ['Nostoc azollae' 0708] Length = 426 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 270/428 (63%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+NP+ + L R + + IL L +K R L K +++AR N +GQ Sbjct: 1 MLDIKQIRENPQLVQYKLNSRSGKYDIQSILDLSQKQRELEAKRNELQARSNEIGKLVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + G + LK E + LK L LE +E E+ + +++L+ +PN+P + P+G Sbjct: 61 KVKSGVNPQDPEIQPLKEEGNALKITLSELEPQEKELKAQIQELLLALPNLPSDSTPMGA 120 Query: 118 SANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 S +N +R + H+EIGE LG+++F+RA K++ +RF L G A LER Sbjct: 121 SEEDNPEVRRWGDQYKRENPNILPHWEIGEKLGILNFERAVKIAQSRFVSLIGTGAALER 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVS 235 AL QFM+ H + GY EVS PLLV +++ GTGQ+PKFA++ F C D WLIPT+EV Sbjct: 181 ALIQFMLSKHI-QAGYIEVSPPLLVNTDSLTGTGQLPKFAEESFKCADDELWLIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TN Y EII ++ LP+ P FR EAGS GRD RG++R HQF K ELV + + E+S Sbjct: 240 VTNFYRGEIINAEELPIYHCAYTPCFRREAGSYGRDMRGLIRLHQFNKVELVKLVKPENS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 F E E+++ AE IL+ L L YRV++LCT D+GF A KTYDLEVWL + YREISSCS Sbjct: 300 FDELEKLVESAESILQALKLPYRVINLCTADVGFGATKTYDLEVWLPYSSKYREISSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 CG+FQ+RR + R+++ K +F HTLNGSG+AVGR + AILENY DG++ +P VL+ Sbjct: 360 CGDFQARRADIRFKEAGKKGTQFVHTLNGSGLAVGRTMAAILENYQQPDGTIQVPEVLQV 419 Query: 416 YMNNLAVI 423 Y+ V+ Sbjct: 420 YL-GREVL 426 >gi|206602909|gb|EDZ39389.1| Seryl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG'] Length = 442 Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats. Identities = 187/433 (43%), Positives = 259/433 (59%), Gaps = 10/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ I + + AL R + + +L ++ L K+ E +R RN S +IG+ Sbjct: 1 MLDIRRILSDTDACRKALLDRKTDIPIDDVLEEEKDLASLRKRWESLRETRNRLSEEIGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G +L E+ ++ ++ ++E++ + +L++ + +PN+P VP+G Sbjct: 61 KKRVG--EETASLMEESRSVNGEIALMEQDLLKREEALRERLLLLPNIPHPSVPVGPDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N + G H+EIG LG++DFDRA LSG+RFSVLTG A LERAL Sbjct: 119 ANKEVHRQGSPREFPFSPLPHWEIGNRLGILDFDRAAVLSGSRFSVLTGDGARLERALTS 178 Query: 181 FMIDLHT-------SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTS 232 +M+D HT S+ YTEVS PLLVR E M GTGQ PKF ++ F D LIPT+ Sbjct: 179 WMLDTHTASGVTRRSQKSYTEVSVPLLVRPEMMEGTGQFPKFREESFQIPEDNLVLIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL I+E + LP+++ FR EAG+AG+DTRG++RQHQF K ELV +T Sbjct: 239 EVPVTNLNRDSILEEEDLPVKYVASTTCFRREAGAAGKDTRGLIRQHQFQKVELVWVTSP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 + S+ + E + AE+IL L L +R ++LCTGDLGFS+ KTYDLEVW+ Q +YREISS Sbjct: 299 DTSYDDLEELTRDAEQILAGLGLPFRRIALCTGDLGFSSAKTYDLEVWMPAQGVYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RR RYR + HT+NGSGVA+GR + AILEN+ DGSV IP V Sbjct: 359 CSNFEDFQARRAGIRYRPKGGGKPRLVHTMNGSGVAIGRTIAAILENFQEQDGSVVIPEV 418 Query: 413 LRPYMNNLAVIKK 425 LRPYM + + Sbjct: 419 LRPYMGGKSRLVP 431 >gi|238898398|ref|YP_002924079.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259511673|sp|C4K5T8|SYS_HAMD5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|229466157|gb|ACQ67931.1| serine tRNA synthetase; also charges selenocystein tRNA with serine [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 430 Score = 391 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 192/430 (44%), Positives = 264/430 (61%), Gaps = 10/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R+ P + L +R+ + ++ ++L K E ++A+RNS SA I + Sbjct: 1 MLDPHILRKEPHTVAEKLARRYFSLNLSMLFEQEQHRKMLQVKTEALQAKRNSLSASIAE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G +D+L E + LK L +KE E+ ++ +PN+P + VP G + Sbjct: 61 GKKKG--ENIDSLYIEVNQLKITLDSAQKELEELQKKIRAFQLSLPNLPDDSVPEGKNEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I G+ + +H +GE L +DF A +L+G+RF V+ G +A L RAL Q Sbjct: 119 DNQEIMRWGQPKKYSFPALDHVTLGEKLTGLDFASAAQLAGSRFVVMKGPIARLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEV 234 FM+DLHT ++GYTE P V +++ GTGQ+PKF +D+F LIPT+EV Sbjct: 179 FMLDLHTKQNGYTEFYVPYFVNHDSLLGTGQLPKFGEDLFHIEPLGSDDKKYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNL +I+E SLPL+ P FRSEAGS GRDTRG++R HQF K ELV ITR ED Sbjct: 239 PLTNLVRQQILEESSLPLKMMAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQITRPED 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + AE++LK+L+L YR + LCTGD+GF A KTYDLEVWL GQ YREISSCS Sbjct: 299 SMRALEELTEHAEQVLKKLELPYRKMLLCTGDMGFGAKKTYDLEVWLEGQKTYREISSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 G+FQ+RRM +RY+ + F HTLNGSG+AVGR L+A++ENY +GS+ +P VL+ Sbjct: 359 NMGDFQARRMQTRYKTAS--KNCFVHTLNGSGLAVGRTLVAVMENYQQENGSIAVPQVLQ 416 Query: 415 PYMNNLAVIK 424 PYM L IK Sbjct: 417 PYMEGLEYIK 426 >gi|124516121|gb|EAY57629.1| Seryl-tRNA synthetase [Leptospirillum rubarum] Length = 445 Score = 391 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 189/435 (43%), Positives = 261/435 (60%), Gaps = 10/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ I + E AL R + + +L +++ L K+ E +R RN S +IG+ Sbjct: 1 MLDIRRILSDTEACRKALLDRKTDIPIDAVLEEEKELSSLRKRWESLRETRNRLSEEIGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G L E+ ++ ++ ++E++ + +L++ + IPN+P VP+G Sbjct: 61 KKRVG--EETAPLMEESRSVNAEIALIEQDLLKREEALRERLLLIPNIPHPSVPVGPDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N + G H+EIG LG++DFDRA LSG+RFSVLTG A LERAL Sbjct: 119 ANREVHRKGSPREFPVSPLPHWEIGNRLGILDFDRAAVLSGSRFSVLTGEGARLERALTS 178 Query: 181 FMIDLHTSE-------HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTS 232 +M+D HT+ YTEVS PLLVR E M GTGQ PKF ++ F D LIPT+ Sbjct: 179 WMLDTHTASGRTRRSGKAYTEVSVPLLVRPEMMEGTGQFPKFREESFQIPEDNLVLIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL I+E++ LPL++ FR EAG+AG+DTRG++RQHQF K ELV +T Sbjct: 239 EVPVTNLNRDSILEAEDLPLKYVASTTCFRREAGAAGKDTRGLIRQHQFQKVELVWLTSP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 + S+ + E + AE+IL+ L L +R ++LCTGDLGFS+ KTYDLEVW+ Q +YREISS Sbjct: 299 DTSYDDLEELTQDAEQILEGLGLPFRRIALCTGDLGFSSAKTYDLEVWMPAQGVYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RR RYR + HT+NGSGVA+GR + AILEN+ DGSV IP V Sbjct: 359 CSNFEDFQARRAGIRYRPRGGGKPRLVHTMNGSGVAIGRTIAAILENFQEQDGSVVIPEV 418 Query: 413 LRPYMNNLAVIKKEH 427 LRPYM + + + Sbjct: 419 LRPYMGGESRLLPAN 433 >gi|330719001|ref|ZP_08313601.1| seryl-tRNA synthetase [Leuconostoc fallax KCTC 3537] Length = 436 Score = 391 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 183/437 (41%), Positives = 275/437 (62%), Gaps = 15/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R++ + L R + P+ + +L++D++ R I+K+E ++++RN + +I Sbjct: 1 MLDIKYLRKSTQEAKQRLVDRGVAPEKLDELLAVDQQRRDTIQKVESLKSQRNDVTEKI- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A+ + + + ++ L+ ++ ++ ++ L + +PN+ E+VP+G Sbjct: 60 -AFAKRHKEDASEAIAQMQEVGAEIKTLDAQQAQLDEQVQSLAAHLPNLAHEDVPVGPDE 118 Query: 120 NENILIRSVGKK---------PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 N+ R + H++IGE LG++DF+R K+SGARF G Sbjct: 119 AANVEQRKWEPAVYGHRPQALAPTPEWVKAHYDIGERLGILDFERGAKVSGARFLYYVGD 178 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLI 229 A LERA+ FM+D H + GYTE+ P++V D AM+GTGQ PKF +D + + I Sbjct: 179 GARLERAVYNFMLDEH-RKEGYTEMITPIVVNDSAMFGTGQYPKFQEDAYRVAGLDQTYI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN YS E + ++ LP++FT L+PSFR EAG+AG+DTRG++R HQF K E+V Sbjct: 238 PTAEVPLTNYYSGETLPAEDLPIKFTALSPSFRKEAGAAGKDTRGLIRLHQFNKVEMVKF 297 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ E S+ E E+M + AE IL++L L Y V++L TGD+GFSA KTYD+EVW+ Q +YRE Sbjct: 298 TKPEQSYDELEKMTANAENILQKLGLPYHVIALSTGDMGFSAAKTYDVEVWMPQQQVYRE 357 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISS S +FQ+RRM+ YRD K L+ HTLNGSG+AVGR + AILENY N DG+VTI Sbjct: 358 ISSVSNTEDFQARRMHITYRDEQGK-LQLVHTLNGSGLAVGRTIAAILENYQNEDGTVTI 416 Query: 410 PTVLRPYMNNLAVIKKE 426 P VL+PYM ++ Sbjct: 417 PEVLQPYMGGQEYLQAT 433 >gi|116617315|ref|YP_817686.1| seryl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272484|sp|Q03ZQ9|SYS_LEUMM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116096162|gb|ABJ61313.1| seryl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 435 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 194/436 (44%), Positives = 276/436 (63%), Gaps = 14/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R+N + L+ R + P+ + +L LD+K R LI+K+E ++A+RN S +I Sbjct: 1 MLDIRYMRKNSAEVKQRLEYRGVNPETIDELLELDQKRRDLIQKVESLKAQRNDVSDKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + + + + L+ E+ + ++++ + +PN+ +VP+G Sbjct: 61 FAKRQ--KEDASEAILQMKQVGADIKSLDNEQTLLDEQVREIAAHLPNMAAFDVPVGPDE 118 Query: 120 NENILIRSV--------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 + N+ R + H+EIGE LG++DF+R K+SGARF G Sbjct: 119 SANVEQRKWAPEEYGSRPHALEEASWVKAHYEIGENLGILDFERGAKVSGARFLYYVGDG 178 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIP 230 A LERA+ FM+D H + GYTE+ P++V D AM+GTGQ PKF DD + + IP Sbjct: 179 ARLERAVYNFMLDEH-RQEGYTEMITPIVVNDSAMFGTGQYPKFQDDAYRVEGLNQTYIP 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV LTN YS E + S+ LP++FT L+PSFR EAGSAG+DTRG++R HQF K E+V T Sbjct: 238 TAEVPLTNYYSGEELPSEDLPIKFTALSPSFRKEAGSAGKDTRGLIRLHQFNKVEMVKFT 297 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + EDS+ E E+M AE IL++L+L Y V+ L TGD+GFSA KTYD+EVW+ QN+YREI Sbjct: 298 KPEDSYEELEKMTLDAENILQKLNLPYHVIVLSTGDMGFSAAKTYDIEVWMPQQNVYREI 357 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SS S +FQ+RRM+ YRD ++K L+ HTLNGSG+AVGR + AILENY N DGSVTIP Sbjct: 358 SSVSNTEDFQARRMHITYRDADNK-LQLVHTLNGSGLAVGRTVAAILENYQNEDGSVTIP 416 Query: 411 TVLRPYMNNLAVIKKE 426 VLRPY+ ++ Sbjct: 417 EVLRPYLAGQEKLEPT 432 >gi|296535523|ref|ZP_06897707.1| serine--tRNA ligase [Roseomonas cervicalis ATCC 49957] gi|296264149|gb|EFH10590.1| serine--tRNA ligase [Roseomonas cervicalis ATCC 49957] Length = 426 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 229/427 (53%), Positives = 296/427 (69%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ +R +P D AL +R L P +E IL+ D R ++++ARRN S +IG Sbjct: 1 MHDIRIVRADPAAFDAALARRGLAPVAEAILAQDTARRAAQTAAQEVQARRNQISKEIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +G + AL+ E +TL+ ++ LE E + ++ L+ +PN+ EVP G + Sbjct: 61 AKRQGGDT--AALEAEGATLRGRMEALEAEAKQADAAQTALLEALPNLLDAEVPEGRDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+++ G+ P+ ++HFE+GEALGLMDF A KL+GARF+VL G LA LERALGQ Sbjct: 119 DNVVLHQQGEPPALDFAPKQHFELGEALGLMDFGAAAKLAGARFTVLRGALARLERALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 +MI LH EHGYTE S PLLV D MYGTGQ+PKF +D+F TTDGRWLIPT+EV LTNL Sbjct: 179 YMISLHVEEHGYTETSVPLLVNDATMYGTGQLPKFEEDLFRTTDGRWLIPTAEVPLTNLV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + E++ ++LPLR+T L+P FRSEAGSAGRDTRGMLRQHQF K E+V+ITR EDS EHE Sbjct: 239 AGELLAEQALPLRYTALSPCFRSEAGSAGRDTRGMLRQHQFTKVEMVAITRAEDSAAEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE +L L L +R V LC GD GFSA +TYDLEVWL GQ +REISSCS C +FQ Sbjct: 299 RMTRCAERVLTELGLVWRRVLLCAGDTGFSAARTYDLEVWLPGQGAWREISSCSNCRDFQ 358 Query: 361 SRRMNSRYRDPNSKSLK----FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +RRMN+RYR + K + HTLNGSG+AVGR LIA++E + ADGS+ +P VL P+ Sbjct: 359 ARRMNARYRPEAAPGTKAAPAYLHTLNGSGIAVGRALIAVMETHQQADGSIRVPPVLAPW 418 Query: 417 MNNLAVI 423 M + I Sbjct: 419 MGGVTSI 425 >gi|224372146|ref|YP_002606518.1| seryl-tRNA synthetase [Nautilia profundicola AmH] gi|254783040|sp|B9L7B0|SYS_NAUPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|223589986|gb|ACM93722.1| seryl-tRNA synthetase [Nautilia profundicola AmH] Length = 416 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 183/419 (43%), Positives = 264/419 (63%), Gaps = 5/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + ++ E++ LK + ++ E I L ++ + + ++ + +RN S QIG Sbjct: 1 MIDLKLLEKDFENVSKRLKLKGVDENNLEEIKKLFKEKKEIKTTLDKLLEQRNILSKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + G + +K E ++LKE++ +LE++ + SL + IPN+P E+VPIG Sbjct: 61 NFMKNGEKDKAEEIKKEVNSLKEEISVLEEKLKTIEDSLLQKALVIPNIPDEDVPIGKDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ I+ VG+ P+ + H E+GE L +DF R KL+ +RF+V+ A LERAL Sbjct: 121 DENVEIKRVGEIPTFDFEPKPHDELGEKLDWLDFTRGVKLAKSRFTVMKKDAARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 F +D H E G+ EV P +V E M GTGQ+PKF +D+F + +LIPT+EV LTN Sbjct: 181 NFFLD-HNREWGFEEVYVPFMVNRETMTGTGQLPKFEEDLFKIENEELYLIPTAEVPLTN 239 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EII + P++ T P FR EAGS G+DT+G++RQHQF K ELV+IT+ EDS Sbjct: 240 LFRDEIITNLDEPIKLTAYTPCFRKEAGSYGKDTKGIIRQHQFDKVELVAITKPEDSDKM 299 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M++CA L++L L YR + LCTGDLGFSA KT DLEVW+ QN YREISS S + Sbjct: 300 FDEMVACASNALEKLGLPYRQLMLCTGDLGFSAAKTIDLEVWIPSQNKYREISSVSNTRD 359 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY+D K K HTLNGS +AVGR L+AI+ENY DG++ IP L+ Y+ Sbjct: 360 FQARRAKIRYKD--GKKNKLVHTLNGSSLAVGRTLVAIMENYQTKDGNIQIPEALKKYL 416 >gi|254421409|ref|ZP_05035127.1| seryl-tRNA synthetase [Synechococcus sp. PCC 7335] gi|196188898|gb|EDX83862.1| seryl-tRNA synthetase [Synechococcus sp. PCC 7335] Length = 449 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 191/425 (44%), Positives = 265/425 (62%), Gaps = 8/425 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LDI+ IR E + AL KR + +L+LD + R L K+ D++AR N +G Sbjct: 24 LDIKQIRNQTEQVKAALDKRG-SYDLQPLLALDTQQRDLEKRRSDLQARSNEVGKSVGGK 82 Query: 62 IAEGNL---SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 I G V L+ E + +K+++ LE +E ++ + ++ ++ +PN+P + P+G S Sbjct: 83 IRAGADPQGDEVKTLREEGNRVKQEIGELEPKERDLKAQIESILLTLPNLPSDSTPVGES 142 Query: 119 ANENILIRSVGKK--PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 +N+ +R G + H+EIGE LG+M+F+R+ K++ +RF L+G A LER Sbjct: 143 EADNVEVRRWGDELITPDGKDRLAHYEIGEKLGIMNFERSVKIAQSRFVTLSGAGAALER 202 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD-MFCTTDGRWLIPTSEVS 235 +L FM+D HT GYTE+ P+LV E+M G+GQ+PKFA+D C D WL PT+EV Sbjct: 203 SLISFMLDRHT-RAGYTEILPPILVNSESMQGSGQLPKFAEDGFKCDRDDLWLTPTAEVP 261 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTNL+ E++ S LPL + P FR EAGS GRDTRG++R HQF K E+ E S Sbjct: 262 LTNLHRDEVLASDELPLNYCAYTPCFRREAGSYGRDTRGLIRLHQFNKVEMYKFVHPETS 321 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 F E E++ + AE+IL++L L YRV+ LC+GDLGF+A KTYDLEVWL YREISSCS Sbjct: 322 FDELEKLTADAEDILQQLKLPYRVIELCSGDLGFNATKTYDLEVWLPSAGKYREISSCSN 381 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +FQ RR N R++ K ++ HTLNGSG+AVGR + AILENY DGSV IP VL+ Sbjct: 382 CVDFQGRRANIRFKAAGKKGTEYVHTLNGSGLAVGRTMAAILENYQRPDGSVGIPEVLQK 441 Query: 416 YMNNL 420 YM Sbjct: 442 YMGTQ 446 >gi|78212123|ref|YP_380902.1| seryl-tRNA synthetase [Synechococcus sp. CC9605] gi|123578699|sp|Q3AM35|SYS_SYNSC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|78196582|gb|ABB34347.1| seryl-tRNA synthetase [Synechococcus sp. CC9605] Length = 425 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 184/430 (42%), Positives = 262/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NPE + L +R + + ++ R L ++ ++A N ++GQ Sbjct: 1 MLDQRLVRDNPETIAQQLGRRGKAVDLTKLQLIAQQQRDLEQQRSGLQAEGNRIGKEVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G V L+ + + +K+++ +LE+EE ++ S LK+ + PN+P E P G Sbjct: 61 RIKSGADPKGDEVAELRQQGNAIKQKVAVLEEEEKQLSSELKQQLLGFPNLPSEACPDGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S ++N+ +R G P EH++I E L L D +R+ +++ +RF L G A LERA Sbjct: 121 SEDDNVEVRRWG-TPRVDDGLYEHWQIAERLQLFDTERSVRIAQSRFVTLMGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLHT GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LINFMLDLHT-SKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCAEDDLWLTPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII + LPLR+ +P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 239 TSLHRDEIIPADQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVHPDHSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+R+ + AE +L+ L+L YRV+ LCT DLGFSA +TYDLEVWL G YREISSCS C Sbjct: 299 EAHQRITADAEAVLQALELPYRVLDLCTADLGFSARRTYDLEVWLPGAGAYREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR + R K+ K HTLNGSG+AVGR + A+LEN +DGSV +P L PY Sbjct: 359 GDFQARRSSIR--TKEGKATKLVHTLNGSGLAVGRTMAALLENGQQSDGSVLLPKALVPY 416 Query: 417 MNNLAVIKKE 426 + ++ E Sbjct: 417 V-GRERLQPE 425 >gi|160914819|ref|ZP_02077033.1| hypothetical protein EUBDOL_00826 [Eubacterium dolichum DSM 3991] gi|158433359|gb|EDP11648.1| hypothetical protein EUBDOL_00826 [Eubacterium dolichum DSM 3991] Length = 428 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 144/431 (33%), Positives = 235/431 (54%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + +KK+ + + ++ LD++NR L +K +D+RA+RNS S Q Sbjct: 1 MLDMKFLRENPEIVKENIKKKFQDHKLLMVDEVIELDKQNRALKQKGDDLRAQRNSLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G +A+K + + +++ EK+E E+ + +K ++ IPN+ VP+G Sbjct: 61 IGGLMAKGEKEEANAIKAQVQAMADEMKETEKQEEELSAKIKNIMMQIPNIIDPSVPLGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ H +I E +D D A K++G F L G +A L A Sbjct: 121 DDSENVELKKYGEPVVPAFEVPYHTDIMERFDGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T V P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DKGFTYVVPPFMIRSDVVTGVMSFAEMEGMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I++ K LP +T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTILDEKKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ E+ + LD+ R + C+GDL CK+ D+E W Q Y E+ SCS Sbjct: 300 EWFTKLYMNTVELFRSLDIPVRALECCSGDLADLKCKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + Q+RR+ R + N K F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 TDAQARRLGIRVKGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPKALQPY 417 Query: 417 MNNLAVIKKEH 427 M V+ ++ Sbjct: 418 MGGKTVLVPKN 428 >gi|313902776|ref|ZP_07836173.1| seryl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313466896|gb|EFR62413.1| seryl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 424 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 193/420 (45%), Positives = 270/420 (64%), Gaps = 4/420 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDE-KNRILIKKIEDIRARRNSNSAQIG 59 MLD++++RQ+PE + AL++R L+ L + + R ++++E++RARRN S IG Sbjct: 1 MLDLRFVRQHPEVVREALRRRRLDAADLDALLEADARWRQHLQRLEELRARRNETSEAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG L + + + LE++ ++ ++ + +P +P EVP G A Sbjct: 61 RLRREGG--DASELIAAMRQVGDTIKELEEQVRQLEQEIQDRLLRLPMIPDPEVPDGDDA 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ +R G P R H+++G ALG++DF+RA K++GARF+V G A L RAL Sbjct: 119 GDNVEVRRWGTPPEFGFEPRAHWDLGPALGILDFERAAKITGARFTVFRGLGARLVRALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 QFM+DLHT EHGYTEV P LV ++M GTGQ+PKF +D F +L+PT+EV +TN Sbjct: 179 QFMLDLHTREHGYTEVLPPFLVHRQSMIGTGQLPKFEEDAFRVADSDFYLVPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY EI+++ LP+ P FR+EAGSAGRDTRG++RQHQF K ELV R E S E Sbjct: 239 LYRDEILDAGQLPIYHVAYTPCFRAEAGSAGRDTRGLIRQHQFDKVELVKFVRPEASPEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE++++ AE +L+RL L YRVV +CTGD+GF+ + YDLEVW+ Y EISSCS + Sbjct: 299 HEKLVADAEAVLQRLGLPYRVVLICTGDMGFAQARQYDLEVWMPSYGRYVEISSCSNYRD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR N R+R +F HTLNGSG+AVGR L A+LENY ADGSV IP LRPY+ Sbjct: 359 YQARRANIRFRPEPGARPQFVHTLNGSGLAVGRTLAALLENYQQADGSVVIPPALRPYVG 418 >gi|254420826|ref|ZP_05034550.1| seryl-tRNA synthetase [Brevundimonas sp. BAL3] gi|196187003|gb|EDX81979.1| seryl-tRNA synthetase [Brevundimonas sp. BAL3] Length = 482 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 212/479 (44%), Positives = 282/479 (58%), Gaps = 59/479 (12%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M DI+ IR+NP+ R ++ IL LD + R +D A+RN+ S Sbjct: 1 MHDIRAIRENPQVYVAGWSSRGVDEADGLVADILRLDAELRHAQTTGQDALAKRNAASKL 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG A+ + +++ D LK E LK + + E V L+ L++ N+ E+VP G Sbjct: 61 IGAAMGKKDMAEADRLKAEVEALKGDIAAAAEVEARVGKELRDLLAAQKNLAAEDVPDGE 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+ + G P +++H ++GEALG++DF+ A ++SGARF+VL G LA LERA Sbjct: 121 DEAGNLEVSRWG-TPREGGPAKDHADLGEALGMLDFEAAARMSGARFAVLKGQLARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC---------------- 221 +GQFM+DL T +HGY EV+ PLLVRDEAM+GTGQ+PKF +D+F Sbjct: 180 VGQFMLDLQTDQHGYLEVNPPLLVRDEAMFGTGQLPKFEEDLFKASHVDFDDYQIAHMNL 239 Query: 222 -------------------------------------TTDGRWLIPTSEVSLTNLYSHEI 244 +LIPT+EVSLTNL I Sbjct: 240 INTAWLESSWEFSDGWTNPPEDLVKRLGEVAGEAWRAVETRHFLIPTAEVSLTNLIRETI 299 Query: 245 IESKSL--PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + L P+R T L P FR+EAGSAGRDTRG++RQHQF K E+VSI R EDS EHERM Sbjct: 300 LSEDDLATPMRMTALTPCFRAEAGSAGRDTRGLIRQHQFSKVEMVSIARPEDSDAEHERM 359 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSR 362 +CAE +LK L+L +R + LC GD+GFSA KT+DLEVWL QN YREISSCS CG+FQ+R Sbjct: 360 TACAEAVLKALELPFRRMLLCKGDMGFSAQKTFDLEVWLPSQNTYREISSCSNCGDFQAR 419 Query: 363 RMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLA 421 RM++R++ K +F HTLNGSG+AVGR L+AI+ENY DG + +P VL+PYM L Sbjct: 420 RMDARFKRAGEKKTEFVHTLNGSGLAVGRTLVAIMENYQQEDGRIAVPKVLQPYMGGLT 478 >gi|110669023|ref|YP_658834.1| seryl-tRNA synthetase [Haloquadratum walsbyi DSM 16790] gi|121684671|sp|Q18FL9|SYS_HALWD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|109626770|emb|CAJ53238.1| serine--tRNA ligase [Haloquadratum walsbyi DSM 16790] Length = 460 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 179/445 (40%), Positives = 261/445 (58%), Gaps = 22/445 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D Q +R+NP+ + AL ++ + + + IL+LD++ R + +++R RN S++IG Sbjct: 1 MIDRQLLRKNPDAIRGALDEKGVTDVNLDQILTLDQEWRERKARGDELRHERNQISSKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + A G+ ++ LK +L +E+E ++ S L + IP VP + VP+GT Sbjct: 61 KLKAAGDEDAASEAIAQSQELKNELEEIEREADKLKSELDTAMLKIPQVPDDAVPVGTDE 120 Query: 120 NENILIRSVGKK--PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ R G S H+++GE L ++DF+R K++G F G A LE A Sbjct: 121 SENVERRREGFDSLRSLPDTVIPHYDLGEELEILDFERGAKVTGGGFYFAKGDGARLEHA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---------CTTDGRWL 228 L QFM+D+H E GY +V P+ V ++M GTGQ PKF +D + D WL Sbjct: 181 LVQFMLDIH-REQGYQDVFPPIPVNSQSMVGTGQFPKFTEDAYRIGETNDEPWDNDDLWL 239 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 PT+EV +TN+Y EI+ LP++ P+FR EAG G +TRG++R HQF K ELV+ Sbjct: 240 CPTAEVPVTNMYRDEILLDDDLPVKIQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVN 299 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---- 344 R EDS + +L+ AE +L+RL L YR++ +CTGDLGF+ K YD+EVW G Sbjct: 300 FVRPEDSAERFDGLLTEAEVVLQRLGLPYRILEMCTGDLGFTQRKKYDIEVWAPGDDMAT 359 Query: 345 -----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 + E+SS S G FQSRR RYR +S + HTLNGSGVAV R ++AI+E Sbjct: 360 GPDIGGRWLEVSSVSNFGAFQSRRAGLRYRPERHESASYLHTLNGSGVAVPRVMVAIMEY 419 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIK 424 Y N DG++TIP L+PYMN L+VI+ Sbjct: 420 YQNDDGTITIPEPLQPYMNGLSVIE 444 >gi|326692251|ref|ZP_08229256.1| seryl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 436 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 192/437 (43%), Positives = 269/437 (61%), Gaps = 15/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++++R+N L R + + + +L+LD++ R I+++E+++A+RN+ S +I Sbjct: 1 MLDMKYLRKNEAEATQRLLDRGVPAEKLQELLALDQERREAIQQVENLKAQRNAVSDKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A N + ++ L+ + E+ ++K L + +PN+ EVP+G Sbjct: 61 YAKR--NKEDAREAIAAMQQVGAEIKALDARQAELDEAVKNLAAHLPNLAAPEVPVGPDD 118 Query: 120 NENILIRSV---------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 N+ R + H+EIGEALG++DF+R K+SGARF G Sbjct: 119 TANVEQRVWEPADYGTRPHALADTPSWLKAHYEIGEALGILDFERGAKVSGARFLYYVGD 178 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLI 229 A LERA+ FM+D H + GYTE+ P++V D AM+GTGQ PKF DD + + I Sbjct: 179 GARLERAVYNFMLDEH-RQEGYTEMITPIVVNDTAMFGTGQYPKFQDDAYRVEGLAQTYI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN Y+ E I S+ LP++FT L+PSFR EAG+AG+DTRG++R HQF K E+V Sbjct: 238 PTAEVPLTNYYAGETIPSEDLPIKFTALSPSFRKEAGAAGKDTRGLIRLHQFNKVEMVKF 297 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ E S+ E M + AE IL++L L Y VV L TGD+GFSA KTYD+EVW+ Q +YRE Sbjct: 298 TKPEQSYAELASMTANAENILQKLGLPYHVVMLSTGDMGFSAAKTYDIEVWMPQQKVYRE 357 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISS S +FQ+RRM+ YRD N K L+ HTLNGSG+AVGR + AILENY N DG+VTI Sbjct: 358 ISSVSNTEDFQARRMHITYRDDNDK-LQLVHTLNGSGLAVGRTVAAILENYQNEDGTVTI 416 Query: 410 PTVLRPYMNNLAVIKKE 426 P VLRPYM + Sbjct: 417 PEVLRPYMGGQETLSPT 433 >gi|209522691|ref|ZP_03271249.1| seryl-tRNA synthetase [Arthrospira maxima CS-328] gi|209496740|gb|EDZ97037.1| seryl-tRNA synthetase [Arthrospira maxima CS-328] Length = 431 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 197/434 (45%), Positives = 264/434 (60%), Gaps = 14/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+N + + L +R E IL LDEK R L ++ + R N +G+ Sbjct: 1 MLDIKLIRENSQEIQQRLNRRG-NYDLEAILELDEKRRELEQQRIQLETRSNEIGKLVGE 59 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + AL+ E +K QL LE +E ++ S + L+ +PN+P + P G Sbjct: 60 KIKSGTDPKGPEIQALREEGQQIKSQLSDLEPQEKDLESQITSLLLPLPNLPSDTTPEGK 119 Query: 118 SANENILIRSVGKKPS-AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 S EN+ +R G + H+EIGE LG+++F+R K++ +RF L G A LER Sbjct: 120 SEAENVEVRRWGDEYKLQNAEILPHWEIGEKLGILNFERGVKIAQSRFVSLVGAGAALER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVS 235 AL QFM+D HT +GY EV PLLV ++ TGQ+PKFA++ F C D WLIPTSEV Sbjct: 180 ALVQFMLDTHT-ANGYLEVIPPLLVNSISLTATGQLPKFAEESFKCADDDLWLIPTSEVP 238 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 + NLY EI+ES+ LP+ + P FR EAGS G+DTRG++R HQF K ELV + E S Sbjct: 239 VVNLYRDEILESEQLPIYHCSFTPCFRREAGSYGKDTRGLIRLHQFNKVELVKLVHPETS 298 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EHE++++ AE IL+ L L YRV+ LCTGDLGF+A K YDLEVWL YREISSCS Sbjct: 299 ELEHEKLVADAEGILQALKLPYRVIELCTGDLGFAAAKCYDLEVWLPSAGTYREISSCSN 358 Query: 356 CGNFQSRRMNSRYRDPNSKS------LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 +FQ+RR N R+R+ +F H LNGSG+AVGR + A+LENY DGSV + Sbjct: 359 VKDFQARRANIRFREAKGDPKKKKKKTEFVHALNGSGLAVGRTMAAVLENYQQPDGSVKV 418 Query: 410 PTVLRPYMNNLAVI 423 P VL+PY+ V+ Sbjct: 419 PEVLQPYL-GREVL 431 >gi|218134359|ref|ZP_03463163.1| hypothetical protein BACPEC_02253 [Bacteroides pectinophilus ATCC 43243] gi|217989744|gb|EEC55755.1| hypothetical protein BACPEC_02253 [Bacteroides pectinophilus ATCC 43243] Length = 427 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 143/429 (33%), Positives = 223/429 (51%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++ + + P + +++LDE+ R K+ ++IR+ RN S Q Sbjct: 1 MLDLKFVRENPEVVKQNIRNKFQDQKLPLVDEVIALDEQARATQKEADEIRSSRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + LK + + E+L LE E E+ + K++ IPN+ VPIG Sbjct: 61 IGMLMGQGKKEEAEELKAQVAKNAERLTELEAREAELNEKVTKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G H +I E L +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIEKFGDPFVPDFEIPYHTDIMEKLHGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTITPEAELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSN 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + LD+ R ++ C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDLFRSLDIPVRTLNCCSGDLADLKVKSLDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K F HTLN + VA R LIA LEN LN DGSV IP VL+PY Sbjct: 360 GDAQARRLKIRVNGEDGKKY-FAHTLNNTVVAPPRMLIAFLENNLNEDGSVRIPKVLQPY 418 Query: 417 MNNLAVIKK 425 M VI+ Sbjct: 419 MGGKTVIEP 427 >gi|289581841|ref|YP_003480307.1| seryl-tRNA synthetase [Natrialba magadii ATCC 43099] gi|289531394|gb|ADD05745.1| seryl-tRNA synthetase [Natrialba magadii ATCC 43099] Length = 459 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 168/444 (37%), Positives = 252/444 (56%), Gaps = 21/444 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D +R+ PE + AL+ R + + +L DE+ R L + +++R RN + IG+ Sbjct: 1 MIDQTTLREQPEAVREALENRGADIDLDDLLETDERWRELKARGDELRHERNEITDTIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +AEG + E+ LK ++ +E E E+ L + + IP +P E VP+G + Sbjct: 61 LVAEGKDEEREEAIAESKELKAEIEDVEAEAAELRDELDERLLEIPQLPDESVPVGEDED 120 Query: 121 ENILIRSVGKKPSAI--HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ R G H+++GE + ++D R K +G+ F L G A LE AL Sbjct: 121 DNVEDRRWGFDDMRDLPDDIVPHYDLGEEMDIIDEARGAKTTGSGFYFLKGDGARLEHAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---------CTTDGRWLI 229 QFM+D+H E Y ++ P+ V E+M GTGQ+PKFADD + + WL Sbjct: 181 IQFMLDIH-REQDYVDLFPPVPVTSESMRGTGQLPKFADDAYRLGGSNEEDYEDEDLWLC 239 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+Y+ +I+ LPL+ P+FR EAG G +TRG++R HQF K ELV+ Sbjct: 240 PTAEVPVTNMYADDILLKDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVNF 299 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ----- 344 E+S+ E +LS AEE+L++L L YR++ LCTGDL F++ KTYD+E+W Sbjct: 300 VEPENSYDRLEGLLSEAEEVLQQLGLPYRILELCTGDLTFASAKTYDIEIWAPADDMDDG 359 Query: 345 ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + E+SS S +FQ+RR RYR +S + HTLN SG+A+ R ++A+LE Y Sbjct: 360 PDEGGRWLEVSSASNFEDFQARRAGLRYRPERHESADYLHTLNASGLALPRVMVAVLEYY 419 Query: 401 LNADGSVTIPTVLRPYMNNLAVIK 424 N DG+VT+P LRPYM VI+ Sbjct: 420 QNEDGTVTVPEALRPYMGGQEVIE 443 >gi|118602970|ref|YP_904185.1| seryl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567909|gb|ABL02714.1| seryl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 429 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 188/431 (43%), Positives = 268/431 (62%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML + +R N + + ALKKRH ++ L+ + + ++++ RN S IG+ Sbjct: 1 MLSKKQLRLNIKAVADALKKRHFYFDVNQLIELENNRKKNQIETQNLQNVRNIQSKAIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G V L + L ++L +++ + S + ++ +PN+P VP G S Sbjct: 61 AKVSG--EDVKPLLKNIADLSDKLNLVKSNLQVIQSDIDAIVLLMPNIPHYSVPWGKSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ ++H ++GE G +DF+ + K+SG RFSV+TG +A L RAL Q Sbjct: 119 DNVEVSKWGEPGQYDFDVKDHVDLGEMYG-LDFETSVKISGTRFSVMTGKIARLHRALTQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------RWLIPTS 232 FM+D H+ +GYTE P LV E++ GTGQ+PKF D+F T +LIP++ Sbjct: 178 FMLDRHSEVNGYTEAYVPYLVNAESLIGTGQLPKFEADLFKTYLHGEQGEAKTLYLIPSA 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TN+ + I++ LPL+F PSFRSEAGS GRDTRG++RQHQF K ELV + + Sbjct: 238 EVPVTNMMRNMIVKESDLPLKFVAHTPSFRSEAGSYGRDTRGLIRQHQFEKVELVQVVKA 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 +DS+ E + + AE IL+ L+L YR V+LCTGDLGFSA KTYDLEVWL GQN YREISS Sbjct: 298 QDSYQALEELTAHAEGILQALELPYRKVNLCTGDLGFSAAKTYDLEVWLPGQNAYREISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS NFQ+RR+ RY++ + + HTLNGSG+AVGR L+A+LEN+ AD S+ IP V Sbjct: 358 CSCFENFQARRLQLRYKNEETNKPELLHTLNGSGLAVGRTLVAVLENHQQADRSIKIPFV 417 Query: 413 LRPYMNNLAVI 423 L+ YM +L VI Sbjct: 418 LQSYMGSLKVI 428 >gi|307243436|ref|ZP_07525592.1| serine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] gi|306493160|gb|EFM65157.1| serine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] Length = 426 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 181/422 (42%), Positives = 263/422 (62%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH---LEPQSEYILSLDE-KNRILIKKIEDIRARRNSNSA 56 MLD++ IR+N + + + + +R +P+ + + K + ++K++E ++ + N +S Sbjct: 1 MLDVKRIRENLDEIKLLMGRRGEGEFDPKDLDEVLDLDDKRKAILKEVEVLKNKSNVDSK 60 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I + G +D +K E L +++ + E EV L + IPNVP +VP G Sbjct: 61 KIPVMMKNG--ENIDEIKAELKVLSDKIKEFDVELREVEEKLVYRLMRIPNVPHPDVPQG 118 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +N+ IR G+ + H++IG L ++DF+R K++G+RF+VL G + LER Sbjct: 119 ETDEDNVEIRRWGEPTKFDFEHKAHWDIGTDLDILDFERGGKITGSRFTVLKGLGSKLER 178 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVS 235 +L F +D HT +GYTEV P + + GTGQ+PKF +DMF + +PT+EV Sbjct: 179 SLIGFFLDQHTENNGYTEVIPPFIANRNSFIGTGQLPKFEEDMFKLEGLEYFLVPTAEVP 238 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLY++EI+ LP++ P FRSEAGSAGRDTRG++RQHQF K ELV + EDS Sbjct: 239 VTNLYNNEILSLDKLPIKHCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDS 298 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E E + + AE++L+ L L YRVV +CTGDLGF+A K YDLEVW+ N Y EISSCS Sbjct: 299 YQELETLTNDAEKMLQLLGLPYRVVKICTGDLGFTAAKKYDLEVWMPSYNRYVEISSCSN 358 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR N R++ + +F HTLNGSG+AVGR L AILENY ADGSV +P LR Sbjct: 359 FEDFQARRANIRFKRDRNAKTEFVHTLNGSGLAVGRTLAAILENYQQADGSVVVPEALRK 418 Query: 416 YM 417 YM Sbjct: 419 YM 420 >gi|21673441|ref|NP_661506.1| seryl-tRNA synthetase [Chlorobium tepidum TLS] gi|30173171|sp|Q8KES6|SYS_CHLTE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|21646543|gb|AAM71848.1| seryl-tRNA synthetase [Chlorobium tepidum TLS] Length = 427 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 169/429 (39%), Positives = 262/429 (61%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +IRQNP+ + L++R P+ + +L D + + ++++ +D++A RN S + Sbjct: 1 MLDITYIRQNPDDVKEMLRRRQQQGDAPKVDRLLERDAERKAMVQRTDDLKALRNRVSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G S D L + + +++ L+ + + +++L+ +PN + VP G Sbjct: 61 IANIKRTGQGS-ADELIGQMKQVSDEIADLDLALSALEAEIEELLLTLPNKLHKSVPEGR 119 Query: 118 SANENILIR-SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 SA EN+L + V + + + H E+G++LG++DF+R K+SGA F V TG A LER Sbjct: 120 SAEENVLYKGPVSFEHNLDFPVKNHLELGKSLGILDFERGAKISGAGFPVYTGKGARLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVS 235 AL FM+D H++ HGYTEV P +V E++ GTGQ PKFAD ++ + + IPT+EV Sbjct: 180 ALINFMLDTHSANHGYTEVFPPFMVNQESLRGTGQWPKFADQVYHMPEDGLYAIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNL+ EI+++ LP+ + + FR EAGS G+DTRG LR HQF K E+V TR E S Sbjct: 240 VTNLHRGEILDADKLPIAYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVRFTRPEAS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E +L AE IL L + YRV++LC+GD+ +A K YD+EVW +N Y E SS S Sbjct: 300 YEALEEILGHAEAILVALKIPYRVITLCSGDISANAAKCYDIEVWSPAENKYLEASSVSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RR N R++ + +F HTLNGSG+A R ++++LE+Y ADG + +P L+P Sbjct: 360 FEDYQARRSNIRFKPDSKSKPEFVHTLNGSGLATSRLMVSLLEHYQTADGKLMVPEALKP 419 Query: 416 YMNNLAVIK 424 Y +I+ Sbjct: 420 YT-GFEIIE 427 >gi|255994652|ref|ZP_05427787.1| serine--tRNA ligase [Eubacterium saphenum ATCC 49989] gi|255993365|gb|EEU03454.1| serine--tRNA ligase [Eubacterium saphenum ATCC 49989] Length = 421 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 184/426 (43%), Positives = 275/426 (64%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R + E+ +K+R + S + LDE+ R ++K++E ++ ++ + SA+I Sbjct: 1 MLDIKKFRIDSENFIAGIKRRGKGDFGSGSLAKLDEQRRAILKEVEALKNKKKTESAKIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +G VD L E + ++ L+KE E+ ++ L+ IPN+P E VP G Sbjct: 61 ELKKQGQ--DVDGLLAEMKKISDKTKELDKEVAEIEDKIEDLLLGIPNIPHESVPDGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ IR +G+ P + H+E+G+ L ++DF+RA K++G+RF+V G A LER++ Sbjct: 119 SANVEIRKIGEVPVKNFREQAHWELGDKLDILDFERAGKITGSRFTVYKGLGARLERSVI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM++ H ++GYTEV P +V AM GTGQ+PKF +D+F + IPT+EV +TN Sbjct: 179 NFMLNTHV-DNGYTEVMTPFMVNRRAMTGTGQLPKFEEDLFAVNAKDYFLIPTAEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+S EI+ + +P + FR EAG+AGRDT+G++RQHQF K ELV + + E+S+ E Sbjct: 238 LHSGEILNVEEVPKNYVAYTACFRKEAGAAGRDTKGLIRQHQFNKVELVKLVQPENSYEE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 +++L+ AE ILK+L+L YRVV LCTGDLGFSA TYD+EVW+ Y EISSCS + Sbjct: 298 LDKLLANAESILKKLELPYRVVKLCTGDLGFSAAMTYDIEVWMPSYGRYVEISSCSNFED 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR N R R+ ++K + F HTLNGSG+AVGR + AILEN DGS+ +P VL+ YM Sbjct: 358 YQARRANIRMRNADNKPV-FVHTLNGSGLAVGRTVAAILENCQQEDGSIKVPDVLQSYM- 415 Query: 419 NLAVIK 424 +IK Sbjct: 416 GRELIK 421 >gi|240143768|ref|ZP_04742369.1| serine--tRNA ligase [Roseburia intestinalis L1-82] gi|257204237|gb|EEV02522.1| serine--tRNA ligase [Roseburia intestinalis L1-82] gi|291537259|emb|CBL10371.1| seryl-tRNA synthetase [Roseburia intestinalis M50/1] gi|291539204|emb|CBL12315.1| seryl-tRNA synthetase [Roseburia intestinalis XB6B4] Length = 429 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 136/429 (31%), Positives = 223/429 (51%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+D++++R+NPE + +K + + P + ++ LD K R + ++ +D+RA RN S Q Sbjct: 1 MIDLKFLRENPEVVKQNIKNKFQDHKLPLVDEVIELDAKARAVQQEADDLRASRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + +G +A+K + + +L LE++E E+ + +++ IPN+ VPIG Sbjct: 61 IGQLMGQGKKDEAEAVKAQVNANAARLAELEEQEKELQEKVTRIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N+ I G H +I E +D D A K++G F L G +A L A Sbjct: 121 DDSCNVEIEKFGDPVVPDFEIPYHTDIMERFNGIDLDAAGKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T V P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYVIPPFMIRSNVVTGVMSFDEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I + + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTINDEEKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 T ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 TWYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + F HTLN + VA R LIA LEN LN DGSV +P L+PY Sbjct: 360 GDAQARRLKIRVKGSDGNKY-FAHTLNNTVVAPPRMLIAFLENNLNEDGSVNVPKALQPY 418 Query: 417 MNNLAVIKK 425 M + Sbjct: 419 MGGKEKLVP 427 >gi|187251906|ref|YP_001876388.1| seryl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|238065101|sp|B2KEV5|SYS_ELUMP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|186972066|gb|ACC99051.1| Seryl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 424 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 185/428 (43%), Positives = 259/428 (60%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ + E + +L R+ I L++ + L+ +E++RA+RN S + Sbjct: 1 MLDIKLFANDLEGVKKSLASRNPALLTLVGEITELNKTYKELLTSVENMRAKRNELSKSV 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + + + + E S +K + E E+ + + IPN+P V IG Sbjct: 61 GILK-QKDPAAAEEAMKEVSLIKTGMSEKENMLEEIKKKISNTMLNIPNMPDPSVTIGKD 119 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N IR G PS +H +GE LG++DF+ A LSG+RF++L G A LERAL Sbjct: 120 EKDNKEIRKDGAAPSFSFKPLDHHAVGEKLGILDFETAAVLSGSRFALLKGDGARLERAL 179 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSL 236 +M+D H + GYTEV P +V +E + GTGQ+PKF +DM+ ++LI T+E+ L Sbjct: 180 ISYMLDKHA-KKGYTEVVPPSIVNEEILIGTGQLPKFREDMYALEGEPKQFLISTAEIPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ ++++ LP++ T P FR EAG+ G+DTRG++R HQF K ELV I+ DSF Sbjct: 239 TNMNRGKVLQEAELPVKLTAGTPCFRKEAGTYGKDTRGLIRNHQFDKVELVMISNSNDSF 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E M + AE++LK L L YR V LCTGD+GFS+ KTYD+EVW+ +N YREISSCS C Sbjct: 299 NLLEAMTADAEDVLKGLGLAYRTVELCTGDMGFSSAKTYDIEVWMPSENKYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RRMN RY++ K ++F HTLNGSGVAVGR L AILENY DGSV +P LRPY Sbjct: 359 TSFQARRMNLRYKNAEGK-IEFVHTLNGSGVAVGRALAAILENYQQEDGSVIVPEALRPY 417 Query: 417 MNNLAVIK 424 +IK Sbjct: 418 F-GKDIIK 424 >gi|238923500|ref|YP_002937016.1| seryl-tRNA synthetase [Eubacterium rectale ATCC 33656] gi|238875175|gb|ACR74882.1| seryl-tRNA synthetase [Eubacterium rectale ATCC 33656] gi|291525557|emb|CBK91144.1| seryl-tRNA synthetase [Eubacterium rectale DSM 17629] gi|291528340|emb|CBK93926.1| seryl-tRNA synthetase [Eubacterium rectale M104/1] Length = 429 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 139/431 (32%), Positives = 221/431 (51%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+D++++R+NP+ + +KK+ + P + ++ D+K R ++ +D+RA++N S Q Sbjct: 1 MIDLKFLRENPDLVKENIKKKFQDHKLPLVDEVIEYDKKAREAQQEADDLRAKKNQVSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G +A+K E + + ++L LE E E + + + IPN+ VPIG Sbjct: 61 IGALMAQGKKEEAEAVKAEVAQISKRLTELEPLEKEYQDKVLEDMMKIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+ G+ H +I E +D D A K++G F L G +A L A Sbjct: 121 DDTFNVENEKFGEPVVPDFEIPYHTDIMERFDGIDLDAAGKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 MTAYARDFMI-GKGFTYCIPPFMIRSNVVTGVMSFEEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + +DS Sbjct: 240 IGKFIDTINDESKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPQDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E+M E+ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWYEKMWKYTVELFRSLDVPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + K F HTLN + VA R LIA LEN LNADGSV IP L+PY Sbjct: 360 GDAQARRLKIRVKGEDGKKY-FAHTLNNTVVAPPRMLIAFLENNLNADGSVNIPKALQPY 418 Query: 417 MNNLAVIKKEH 427 M + +H Sbjct: 419 MGGTEKLIPKH 429 >gi|302535646|ref|ZP_07287988.1| seryl-tRNA synthetase [Streptomyces sp. C] gi|302444541|gb|EFL16357.1| seryl-tRNA synthetase [Streptomyces sp. C] Length = 425 Score = 388 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 155/429 (36%), Positives = 246/429 (57%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + + +LS DE+ R + +++R + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVELVDALLSADERRRSSGMRFDELRNEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + LK+ + E E++E + K+L+ + N+ E+VP+G Sbjct: 61 KA----SPEERAELLTKAEQLKQDVKAAEAEQNEADEAAKQLLLKLGNIVHEDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + R+H E+GE+LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFTVLETHGTIRDFGAEGFAPRDHLELGESLGAIDVERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+ + P LVR AM GTG + + A++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFIPMLTPALVRPRAMEGTGFLGQAAENVYHLEKDDYYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII+++ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S ED+ Sbjct: 236 AAYHMDEIIDAEKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L ++V+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHKRLLEWEKQWLTSLELPFQVIDVATGDLGASASRKFDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR+ RYRD K TLNG+ AV R ++AILEN+ ADGSV +P VLRPY Sbjct: 356 DGFQARRLAIRYRD--GKKTAPLSTLNGTLCAVPRTIVAILENHQQADGSVRVPPVLRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|67924788|ref|ZP_00518188.1| Seryl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501] gi|67853356|gb|EAM48715.1| Seryl-tRNA synthetase, class IIa [Crocosphaera watsonii WH 8501] Length = 427 Score = 388 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 192/423 (45%), Positives = 260/423 (61%), Gaps = 7/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ IR+ P+ + L +R IL D R L +++AR N I Sbjct: 1 MLDLKQIRETPDTIQALLNRRSASDQYDLTPILERDRTTRELESVRTELQARSNEIGKLI 60 Query: 59 GQAIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 GQ I G + LK E +TLK +L LE +E ++ + ++ L+ PN+P + PI Sbjct: 61 GQKIKSGVDPKGEEIKTLKEEGNTLKTKLGELEPQERQLKAEIEALLLKFPNLPSDSTPI 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G EN+ IR G + H+EI E LG+++ +RA K++ +RF L G A LE Sbjct: 121 GKDETENVEIRKWGDEFLPKIEILPHWEIAERLGILEVERAVKIAQSRFIALIGAGAALE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEV 234 RAL FM+D GY EV P+L+ EA+ GTGQ+PKFA++ F D WL PT+EV Sbjct: 181 RALINFMLDQQI-SAGYLEVMPPVLINSEALQGTGQLPKFAEESFKVPDDDLWLAPTAEV 239 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNLYS EI+E++ LP++ P FR EAGS G+DTRG++R HQF K ELV + E Sbjct: 240 PVTNLYSSEILEAEKLPIKHCAFTPCFRREAGSYGKDTRGLIRLHQFNKVELVKLVHPET 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S EH++++ AE IL+ L L YRV+ LCTGDLGF A K YDLEVWL N YREISSCS Sbjct: 300 SEVEHQQLVKDAEAILQLLKLPYRVLELCTGDLGFGATKCYDLEVWLPSSNSYREISSCS 359 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 C +FQ+RR N R+++ K ++ HTLNGSG+A+GR + AILENY ADG+V IP VL+ Sbjct: 360 NCWDFQARRANIRFKEKGKKGTRYVHTLNGSGLAIGRTMAAILENYQQADGTVKIPDVLQ 419 Query: 415 PYM 417 PY+ Sbjct: 420 PYL 422 >gi|170744612|ref|YP_001773267.1| seryl-tRNA synthetase [Methylobacterium sp. 4-46] gi|238688057|sp|B0UD12|SYS_METS4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|168198886|gb|ACA20833.1| seryl-tRNA synthetase [Methylobacterium sp. 4-46] Length = 435 Score = 388 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 236/435 (54%), Positives = 295/435 (67%), Gaps = 9/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP D L++R LEP + +++LD+ + I + + RRN+ S +IG Sbjct: 1 MHDIRVIRDNPAAFDAGLRRRGLEPLAAELVALDDARKAAISAAQVAQERRNALSKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + AL E + LKEQ P L+ +L ++ IPN P EVP G + Sbjct: 61 AKKARDEERARALMAEVARLKEQAPGLDAAADAAARALDARLAAIPNTPGPEVPEGRDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R R+HFE+GEA GLMDF+ A +LSG+RF VL G LA LERALGQ Sbjct: 121 DNVELRRFE-GRGRAESGRQHFELGEAAGLMDFEAAARLSGSRFVVLKGRLARLERALGQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------RWLIPTS 232 FM+DLHT+EHGYTEV+ PLLVRDEAM+GT Q+PKF DD F G RWLIPT+ Sbjct: 180 FMLDLHTAEHGYTEVAPPLLVRDEAMFGTAQLPKFRDDQFAAQPGAVEPGAPGRWLIPTA 239 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL I+ LPLRFT L P FR+EAG+AGRDTRGMLRQHQF K ELVSIT Sbjct: 240 EVPLTNLVRESILSEDELPLRFTALTPCFRAEAGAAGRDTRGMLRQHQFTKVELVSITAP 299 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S EHERML+CAE +L+RLDL YRV++LCTGD+GF++ KTYD+EVWL GQ YREISS Sbjct: 300 EQSAEEHERMLACAEAVLRRLDLPYRVMTLCTGDMGFASQKTYDIEVWLPGQGTYREISS 359 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS CG+FQ+RRM +R+R + L + H+LNGSGVAVGR LIA++ENY N DGSVT+P+ Sbjct: 360 CSVCGDFQARRMEARFRRREDRGLGYVHSLNGSGVAVGRALIAVMENYQNPDGSVTVPSA 419 Query: 413 LRPYMNNLAVIKKEH 427 L PYM + I+ H Sbjct: 420 LAPYMGGVTRIEGPH 434 >gi|55379420|ref|YP_137270.1| seryl-tRNA synthetase [Haloarcula marismortui ATCC 43049] gi|1711651|sp|P54221|SYS_HALMA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|1004231|emb|CAA62489.1| seryl-tRNA synthetase [Haloarcula marismortui] gi|55232145|gb|AAV47564.1| seryl-tRNA synthetase [Haloarcula marismortui ATCC 43049] Length = 460 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 170/445 (38%), Positives = 257/445 (57%), Gaps = 22/445 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML Q++R++PE + A++++ + + IL +DE+ R L + + +R RN S++IG Sbjct: 1 MLSRQFVREHPETVRDAIERKGVTGVDLDEILDIDEEWRELKAEGDGLRQERNEVSSKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +G + + LK++L +E+ E+ S L++ + +PN+P E VP G Sbjct: 61 ELKQDGKDEEAQEAIDRSQELKDELQDIEERADELESQLEEALLELPNIPHESVPTGEGE 120 Query: 120 NENILIRS--VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N+ H+++GE L L+DF+R K+SG + + G A LE A Sbjct: 121 ADNVERYREGFDDLRDLPDEVVPHYDLGEDLDLLDFERGAKVSGGGYQFVKGEGARLEHA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWL 228 L QFM+D+H E Y +V P+ V ++M GTGQ+PKFA+D + +D WL Sbjct: 181 LIQFMLDVH-REQEYVDVLPPIPVNSDSMEGTGQLPKFAEDAYRVGARQDDDYDSDDLWL 239 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 +PT+EV +TN+Y EI+ LP++ +P+FR EAG G +TRG +R HQF K ELV+ Sbjct: 240 LPTAEVPVTNMYRGEILLDDDLPVKHQAFSPNFRREAGEHGTETRGYVRVHQFHKVELVN 299 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---- 344 R E+S+ E +L A E+L RL+L YRV+ +CTGD+GF+ K YD+EVW G Sbjct: 300 FVRPENSYDRLESLLDEAAEVLDRLELPYRVLDMCTGDMGFTQAKKYDIEVWAPGDDMED 359 Query: 345 -----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 + E+SS S +FQ+RR RYR +S + HTLNGSG+AV R L+AI+E Sbjct: 360 GPDRGGRWLEVSSVSNFEDFQARRAGLRYRPERHESADYLHTLNGSGLAVPRVLVAIMEY 419 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIK 424 Y N DG++T+P LRPYM VI+ Sbjct: 420 YQNDDGTITVPEPLRPYMGGQEVIE 444 >gi|332705412|ref|ZP_08425490.1| seryl-tRNA synthetase [Lyngbya majuscula 3L] gi|332355772|gb|EGJ35234.1| seryl-tRNA synthetase [Lyngbya majuscula 3L] Length = 427 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 193/424 (45%), Positives = 256/424 (60%), Gaps = 7/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR+NP+ + L +R + + IL L+++ R L ++AR N IG Sbjct: 1 MLDLKQIRENPQKVQELLDRRSVNQYDLQPILELNQRQRELETSRTQLQARSNEIGKLIG 60 Query: 60 QAIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 Q I G + +LK E + +K +L LE +E ++ L L+ +PN+P E PIG Sbjct: 61 QKIKSGSPPQSPEIQSLKEEGNQIKTKLSELEPKEKDLKDQLNTLLLSLPNLPSESTPIG 120 Query: 117 TSANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 S EN+ + + H+EIGE LG+++F+R K++ +RF L G A LE Sbjct: 121 KSEAENVEVHRWGDEYIPKDFPILPHWEIGEKLGILNFERGVKIAQSRFVTLIGAGAALE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEV 234 RAL FM+D GYTEV P+L+ E++ TGQ+PKFA+D F C+ D WL PT+EV Sbjct: 181 RALINFMLDQQI-AAGYTEVMPPVLINSESLTATGQLPKFAEDSFKCSDDDLWLAPTAEV 239 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 L NLY EI+E+ LP+ P FR EAGS GRDTRG++R HQF K ELV I Sbjct: 240 PLVNLYRDEILEASQLPINLCAFTPCFRREAGSYGRDTRGLIRLHQFNKVELVKIVEPST 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S EH+++L AE IL+ L L YR V LCTGD+GFSA TYDLEVWL Q YREISSCS Sbjct: 300 SSQEHQKLLKNAEAILETLKLPYRTVELCTGDIGFSAATTYDLEVWLPSQRTYREISSCS 359 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 C +FQ+RR R+++ K F HTLNGSG+AVGR + ILENY DG+V IP L+ Sbjct: 360 NCFDFQARRGRIRFKESGKKGTHFVHTLNGSGLAVGRTMSGILENYQQPDGTVKIPEALQ 419 Query: 415 PYMN 418 PYM Sbjct: 420 PYMG 423 >gi|126658831|ref|ZP_01729975.1| seryl-tRNA synthetase [Cyanothece sp. CCY0110] gi|126619929|gb|EAZ90654.1| seryl-tRNA synthetase [Cyanothece sp. CCY0110] Length = 427 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 191/423 (45%), Positives = 262/423 (61%), Gaps = 7/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ IR+ P+ + L +R E IL D R L +++AR N I Sbjct: 1 MLDLKQIRETPDTIQALLNRRSASSEYDLTPILDRDRTTRELESVRTELQARSNEIGKLI 60 Query: 59 GQAIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 GQ I G + ALK E +T+K +L LE +E ++ + ++ L+ +PN+P E PI Sbjct: 61 GQKIKGGVDPKGEEIQALKEEGNTVKTKLNELEPQEKQLKAEIEALLLQLPNLPSESTPI 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G EN+ IR G + H+EI E LG+++ +RA K++ +RF L G A LE Sbjct: 121 GKDETENVEIRKWGDEFLPKIEVLPHWEIAERLGILEVERAVKIAQSRFIALIGAGAALE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEV 234 RAL FM+D GY EV P+L+ A+ GTGQ+PKFA++ F D WL PT+EV Sbjct: 181 RALINFMLDQQI-AAGYLEVMPPVLINSSALQGTGQLPKFAEESFKVPDDDLWLAPTAEV 239 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNLYS EI+E+++LP++ P FR EAGS G+DTRG++R HQF K ELV + E Sbjct: 240 PVTNLYSGEILEAETLPIKHCAFTPCFRREAGSYGKDTRGLIRLHQFNKVELVKLVHPET 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S H+++++ AE IL+ L L YRV+ LCTGDLGF A K YDLEVWL N YREISSCS Sbjct: 300 SEVAHQQLVNDAEAILQALKLPYRVLELCTGDLGFGATKCYDLEVWLPSSNSYREISSCS 359 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 C +FQ+RR N R+++ K ++ HTLNGSG+A+GR + AILENY DG+V IP VL+ Sbjct: 360 NCWDFQARRANIRFKEKGQKGTQYVHTLNGSGLAIGRTMAAILENYQQGDGTVKIPDVLQ 419 Query: 415 PYM 417 PY+ Sbjct: 420 PYL 422 >gi|73748415|ref|YP_307654.1| seryl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|147669195|ref|YP_001214013.1| seryl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|289432463|ref|YP_003462336.1| seryl-tRNA synthetase [Dehalococcoides sp. GT] gi|123619533|sp|Q3ZWY0|SYS_DEHSC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083567|sp|A5FRN4|SYS_DEHSB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|73660131|emb|CAI82738.1| seryl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|146270143|gb|ABQ17135.1| seryl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|288946183|gb|ADC73880.1| seryl-tRNA synthetase [Dehalococcoides sp. GT] Length = 413 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 169/425 (39%), Positives = 260/425 (61%), Gaps = 13/425 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+NPE + A+ R+ + + IL LD R L ++++++RA+R + Q Sbjct: 1 MLDLKFIRENPELVRKAVADRNTDAPIDEILELDNSRRNLTQELDNLRAKRKIMAKQ--- 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + E L+ Q+ LE E +V L + +PN+P VP+G + Sbjct: 58 --------RDETAIEEGRVLRGQISTLESELSQVDEKLTDRLLRVPNIPDPSVPVGKDES 109 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+++ G+K + + H+E+GEAL ++DFDR KLSG+RF +L G A L+RAL Sbjct: 110 ENVVLYYRGEKRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGAGARLQRALIA 169 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHT +H YTE+ P +++ E + +G +PKFAD+++ + W +PT+E LTNL Sbjct: 170 FMLDLHTRKHDYTEIYPPYMIKRECLVASGNLPKFADNLYHDAEEDYWWVPTAEAPLTNL 229 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ ++ LP+ + FR E SAG+D RG+ R HQF K EL + EDSF E Sbjct: 230 HRDEILSAEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFAEL 289 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M++ AEEI L + YR+ L T D+ F + K+YD+E++ G + + E+SSCS C +F Sbjct: 290 EKMVADAEEIADALKIPYRLKQLVTADISFGSAKSYDIEMYSPGVDEWLEVSSCSNCTDF 349 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q RR N R+R + +F HTLNGSG+A+ R +I+++ENY DGS+ IP VLRP+M Sbjct: 350 QGRRANVRFRRTSEAKPEFVHTLNGSGLALPRVMISVIENYQQPDGSIVIPEVLRPFM-G 408 Query: 420 LAVIK 424 + VI+ Sbjct: 409 VDVIR 413 >gi|261416780|ref|YP_003250463.1| seryl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373236|gb|ACX75981.1| seryl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326186|gb|ADL25387.1| serine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 428 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 163/432 (37%), Positives = 243/432 (56%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+NPE+ +K++ +L++D + R L+ ++E +++ RN+ S +IG+ Sbjct: 1 MLDIKKIRENPEYYIAETEKKYTTVSLRDVLAVDNERRPLLTEVERLKSERNAQSKRIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV----PLEEVPIG 116 +G D + T L ++ L+K+ E+ +++ +PN+ P + Sbjct: 61 LKKKG--ENADEAQAATRELGNKIDELDKKLKELDYKQTEMLMHVPNIAPRSPEGKDSSD 118 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++ I + +H +GE LG+ DF+R K+SG+ F V G + LER Sbjct: 119 NVVEKDGPIPFDYYTKNDDFARVDHKTLGERLGIFDFERGAKISGSGFPVYRGLGSRLER 178 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEV 234 AL QF +D H + G+ E + P LV M GTGQ+PKF +DM+ D +LIPT+EV Sbjct: 179 ALIQFFLDEH-QKAGFEEFTPPYLVTRNTMRGTGQLPKFEEDMYRCDKDDDLFLIPTAEV 237 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNLYS E+I LP R + FR EAGS G+DTRG+LR HQF K E+V E Sbjct: 238 PLTNLYSGEVIPESELPKRICAYSACFRREAGSYGKDTRGLLRLHQFNKVEMVYFAHPEH 297 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S+ +HE + E++L++L L Y ++LC GDLGF A K YDLEV+ + + E+SSCS Sbjct: 298 SYEDHEELTRFGEKLLEKLGLPYHRLALCKGDLGFGAAKCYDLEVYAPVEKKWLEVSSCS 357 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 ++Q+RR N + + HTLNGSG+A R ++ I +NY DGS+ IP VLR Sbjct: 358 NFEDYQARRANI--KTKVGGKNVYLHTLNGSGLATPRVMVGICDNYQQKDGSLKIPEVLR 415 Query: 415 PYMNNLAVIKKE 426 PYM L I + Sbjct: 416 PYMGGLEFITPK 427 >gi|254384853|ref|ZP_05000190.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces sp. Mg1] gi|194343735|gb|EDX24701.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces sp. Mg1] Length = 425 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 151/429 (35%), Positives = 242/429 (56%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++R + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVDLVDALLSADERRRSSGMRFDELRNEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + LK + E E++E + K+L+ + N+ +VP+G Sbjct: 61 KA----SPEERAELLKKAEQLKGDVKAAEAEQNEADEAAKRLLLQLGNIVHTDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + ++H E+GE+LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFTVLETHGTIRDFAAEGFEPKDHLELGESLGAIDVERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+ + P LVR AM GTG + + A++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFIPMLTPALVRPRAMEGTGFLGQAAENVYHLEKDDYYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII++ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S E++ Sbjct: 236 AAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L ++V+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHQRLLEWEKQWLTSLELPFQVIDVATGDLGSSASRKFDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ RYRD K TLNG+ AV R ++AILEN+ ADGSV +P LRPY Sbjct: 356 DGFQARRLSIRYRD--GKKTAPLSTLNGTLCAVPRTIVAILENHQQADGSVRVPAALRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|260434791|ref|ZP_05788761.1| seryl-tRNA synthetase [Synechococcus sp. WH 8109] gi|260412665|gb|EEX05961.1| seryl-tRNA synthetase [Synechococcus sp. WH 8109] Length = 425 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 182/430 (42%), Positives = 261/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NPE + L +R + + ++ R L ++ +++A N ++GQ Sbjct: 1 MLDQRLVRDNPETIAQQLGRRGKAVDLTKLQLIAQQQRDLEQQRSNLQAEGNRIGKEVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G V L+ + + +K+++ +LE+EE ++ S LK+ + PN+P E P G Sbjct: 61 LIKSGADPKGDEVAGLRQQGNAIKQKVAVLEEEEKKLSSELKQQLLGFPNLPSETCPDGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S ++N+ +R G P EH++I E L L D +R+ +++ +RF L G A LER Sbjct: 121 SEDDNVEVRRWG-TPRVDDNLDEHWQIAERLQLFDTERSVRIAQSRFVTLMGQGARLERG 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLHT GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LINFMLDLHT-SKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCAEDDLWLTPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII + LPLR+ +P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 239 TSLHRDEIIPADQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVHPDQSE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++ + AE +L+ L+L YRV+ LCT DLGFSA +TYDLEVWL G YREISSCS C Sbjct: 299 EAHQQITADAEAVLQALELPYRVLDLCTADLGFSARRTYDLEVWLPGAGAYREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR + R K+ K HTLNGSG+AVGR + A+LEN DGSV +P L PY Sbjct: 359 GDFQARRSSIR--TKEGKATKLVHTLNGSGLAVGRTMAALLENGQQPDGSVLMPKALVPY 416 Query: 417 MNNLAVIKKE 426 + ++ E Sbjct: 417 V-GRERLQPE 425 >gi|90424017|ref|YP_532387.1| seryl-tRNA synthetase [Rhodopseudomonas palustris BisB18] gi|122476273|sp|Q214W8|SYS_RHOPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|90106031|gb|ABD88068.1| seryl-tRNA synthetase [Rhodopseudomonas palustris BisB18] Length = 481 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 233/479 (48%), Positives = 296/479 (61%), Gaps = 57/479 (11%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP D A +R L P ++ ++ D+ R I E +ARRN+ S +IG Sbjct: 1 MHDIKAIRDNPTAFDDAYTRRGLAPIAQSLIDKDDARRKAILASEQAQARRNAASKEIGD 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + +AL E + LK +P L+ + ++LKK +S IPN+PL +VP G + Sbjct: 61 AKKAKDNVRAEALMAEVAELKTTMPALDAAVKDADAALKKALSEIPNLPLADVPEGKDEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + G K S + H+E+GEAL MDF+ A KLSGARF VL LA LERA+GQ Sbjct: 121 DNEVRSHYGVKRSYAFTPKPHYELGEALKQMDFEAAAKLSGARFVVLKKGLARLERAIGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------------- 224 F +D+HT EHGYTEV+ PLLVRDEAM+GT Q+PKF DD F + Sbjct: 181 FFLDVHTEEHGYTEVNPPLLVRDEAMFGTAQLPKFEDDQFFVGNGNNVRRLQQEMRATIE 240 Query: 225 -------------------------------------GRWLIPTSEVSLTNLYSHEIIES 247 RWLIPT+EV LTNL I++ Sbjct: 241 ADDVKNIPDMFVPKSKYDRLLENYLRLETEQIALELTRRWLIPTAEVPLTNLVRESILDE 300 Query: 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAE 307 K LPLR T L FR+EAG+AGRDTRGM+RQHQF K ELVS+T E S EHERMLSCAE Sbjct: 301 KELPLRMTALTQCFRAEAGAAGRDTRGMIRQHQFTKVELVSVTTPEQSKDEHERMLSCAE 360 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCSTCGNFQSRRM 364 E+L+RL+LHYRV++LCTGD+GF++ KTYD+EVW+ GQ YREISSCS CG+FQ+RRM Sbjct: 361 EVLRRLELHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREISSCSVCGDFQARRM 420 Query: 365 NSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 ++R R P+ K +F HTLNGSG AVGR LIA++ENY DGS+ +PTVL+ YM L VI Sbjct: 421 DARSRGPDGK-PRFVHTLNGSGTAVGRALIAVIENYQQEDGSIAVPTVLQRYMGGLKVI 478 >gi|291547583|emb|CBL20691.1| seryl-tRNA synthetase [Ruminococcus sp. SR1/5] Length = 431 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 138/430 (32%), Positives = 223/430 (51%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + ++ + + + + +L LD++NR + +++E +RA RN S Q Sbjct: 1 MLDIKFVRENPEVVKQNIRNKFQDSKLELVDKVLELDKENREIKQEVEALRAERNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + + ++ L + E EV L K + IPN+ VPIG Sbjct: 61 IGALMGQGKREEAEEVKKQVAASGTRIEELSQREKEVEEELLKDMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N+ I G+ H +I E +D D A +++G F L G +A L A Sbjct: 121 DDSQNVEIEKFGEPVVPDFEVPYHTDIMENFDGIDLDSARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +II + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDQIIPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSLDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K HTLN + VA R LIA LEN LNADGSV IP L+PY Sbjct: 360 GDAQARRLKIRVNGKDGKKY-LAHTLNNTVVAPPRMLIAFLENNLNADGSVNIPKALQPY 418 Query: 417 MNNLAVIKKE 426 M + I+K+ Sbjct: 419 MGGMTKIEKK 428 >gi|189347312|ref|YP_001943841.1| seryl-tRNA synthetase [Chlorobium limicola DSM 245] gi|238692177|sp|B3EF00|SYS_CHLL2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189341459|gb|ACD90862.1| seryl-tRNA synthetase [Chlorobium limicola DSM 245] Length = 427 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 172/428 (40%), Positives = 254/428 (59%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +IRQN + + L+ R LE P+ +L LD + R L+++ +D++A RN S Sbjct: 1 MLDITYIRQNQDDVTAMLRNRLLESEIPRVAELLGLDRQRRELVQQADDMKALRNRVSRD 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G+ D L + ++ E + + + S++++++ +PN VP+G Sbjct: 61 IADMKKSGSGP-ADELIGKMKSVAENIAASDTSLKNLESAIEEILLTLPNRLHNSVPVGK 119 Query: 118 SANENIL-IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 SA EN++ G + H E+G++LG++DF+R K+ GA F V TG A LER Sbjct: 120 SAEENVILKEQGGFDYPLDFPLKNHTELGKSLGILDFERGAKVGGAGFPVYTGKGARLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVS 235 +L FM+D HTS HGYTE+ P LV E++ GTGQ PKFAD ++ + + IPT+EV Sbjct: 180 SLINFMLDTHTSGHGYTEIFPPFLVNRESLRGTGQWPKFADQVYTIEEDGLYAIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNL+ E++++ LP+ + + FR EAGS G+DTRG LR HQF K E+V TR E S Sbjct: 240 VTNLHRGEMLDAADLPIAYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVRFTRPEVS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E + AE IL L + YRV+ LC+GD+ +A K YD+EVW ++ Y E SSCS Sbjct: 300 YEALEEIRQHAEAILLALKIPYRVLLLCSGDISANATKCYDIEVWSPAEDKYLEASSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RRMN RYR +F HTLNGSG+A R ++++LE+ +G V +P VLRP Sbjct: 360 FEDYQARRMNIRYRPDGKSRPEFVHTLNGSGLATSRLMVSLLEHNQTPEGKVIVPEVLRP 419 Query: 416 YMNNLAVI 423 Y +I Sbjct: 420 YT-GFDII 426 >gi|291541854|emb|CBL14964.1| seryl-tRNA synthetase [Ruminococcus bromii L2-63] Length = 426 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 142/428 (33%), Positives = 228/428 (53%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+++R+NP+ + +KK+ + P + ++ LDE++R + K+ +++R+ RN S Q Sbjct: 1 MIDIKFLRENPDAVKENIKKKFQDYKLPLVDQVIELDEQSRAVKKQADELRSNRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G ALK E + EQL LEK+E ++ + + +++ IPN+ VPIG Sbjct: 61 IGSLMAQGKKEEGMALKEEVTKQAEQLAELEKQESDLSAKVTEIMMQIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N+ I G H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSQNVEIEKFGDPFVPDFEIPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VIAYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I + ++LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTINKEENLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + +D+ R + C+GDL ++ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSMDIPVRTLECCSGDLADLKVRSLDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K F HTLN + VA R LIA LEN LN DG++ IP LRPY Sbjct: 360 GDAQARRLKIRVTGEDGKKY-FAHTLNNTVVAPPRMLIAFLENNLNEDGTIRIPEALRPY 418 Query: 417 MNNLAVIK 424 M + VIK Sbjct: 419 MGGMEVIK 426 >gi|167647077|ref|YP_001684740.1| seryl-tRNA synthetase [Caulobacter sp. K31] gi|189083561|sp|B0T1Q3|SYS_CAUSK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|167349507|gb|ABZ72242.1| seryl-tRNA synthetase [Caulobacter sp. K31] Length = 474 Score = 386 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 215/473 (45%), Positives = 287/473 (60%), Gaps = 47/473 (9%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR N + + A + + + LD R +++ +A+RN +S IG Sbjct: 1 MHDIKAIRDNQQAFEAAWSAKGRSGAAAEAVKLDALLRAAQTALQEAQAKRNESSKLIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+ + + L E LK + + E EV L+ L++ +PN+P EVP G Sbjct: 61 AKAKKDEAEATRLMAEVEHLKAVMASAAQTETEVGGQLRDLLASLPNIPAPEVPAGEDEA 120 Query: 121 ENILIRSVGKKPS----AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 N+ IR G ++ ++H ++G ALG MDF+ A ++SGARF VL G +A LER Sbjct: 121 GNVEIRRWGDASKLPAGRLNNPKDHVDLGAALGGMDFEAAARMSGARFVVLKGQIARLER 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----------- 225 ALGQFM+DL T +HGYTEVS PLLV+DEA++GTGQ+PKF D+F T++ Sbjct: 181 ALGQFMLDLQTVQHGYTEVSPPLLVKDEALFGTGQLPKFKADLFKTSEQNWVERLDEQIA 240 Query: 226 --------------------------------RWLIPTSEVSLTNLYSHEIIESKSLPLR 253 RWLIPT+EVSLTN+ +I + LPLR Sbjct: 241 LRVPPLLNITQTDVVENLKGLRAAASMDEQAARWLIPTAEVSLTNIVREQITDEAELPLR 300 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 T L PSFRSEAG++GRDTRGM+RQHQF+K ELVSIT + S EHERM+ CAE +LK L Sbjct: 301 MTALTPSFRSEAGASGRDTRGMIRQHQFYKVELVSITTPDQSDEEHERMVGCAEAVLKAL 360 Query: 314 DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS 373 +L +R + LCTGD+GF A KTYDLEVWL QN YREISSCS CG+FQ+RRM++R++ Sbjct: 361 ELPFRTMLLCTGDMGFGAKKTYDLEVWLPSQNTYREISSCSNCGDFQARRMDARFKKVGE 420 Query: 374 KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 K ++ HTLNGSG+AVGR L+A+LENY + G +T+P VL PYM + I E Sbjct: 421 KGARYVHTLNGSGLAVGRTLVAVLENYQDETGRITVPAVLVPYMGGVTHIGGE 473 >gi|260575191|ref|ZP_05843191.1| seryl-tRNA synthetase [Rhodobacter sp. SW2] gi|259022451|gb|EEW25747.1| seryl-tRNA synthetase [Rhodobacter sp. SW2] Length = 429 Score = 386 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 216/430 (50%), Positives = 280/430 (65%), Gaps = 1/430 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP D +L +R + P S IL+ DE R I+ E +A +N+ S +G Sbjct: 1 MHDIRAIRENPAAFDASLARRGIAPLSPEILAHDEARRSAIQAAESAQAAQNTASKAVGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A GN + + L+ + K ++ + + L+ L++ IPN+PL EVP G Sbjct: 61 AKAAGNDAEFERLRALVAEKKAEIAAMTTTANAEDLRLRDLLAGIPNLPLAEVPDGRDEA 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G + +EHFEI MDF A KLSGARF +L G + + RALGQ Sbjct: 121 DNVEVRRWGSPRNLSFTPKEHFEIKAVQPGMDFAAAAKLSGARFVLLRGAVLRVHRALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H +EHG TE P+LV+DEAM+GTG +PKFA+D + TT+G WLIPT+EV+LTN Sbjct: 181 FMLDTHINEHGLTETWTPVLVKDEAMFGTGNLPKFAEDSYQTTNGWWLIPTAEVTLTNTV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ LP+R L FRSEAGSAG+DT GMLRQHQF K E+VSIT E S EH+ Sbjct: 241 AGEILDDAQLPIRMCALTQCFRSEAGSAGKDTSGMLRQHQFEKVEMVSITTPEASLAEHD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE IL++L L YR + LCTGD+GF + KT+DLEVWL GQN YREISS S CG+FQ Sbjct: 301 RMTRCAEAILEKLGLPYRTIVLCTGDMGFGSQKTHDLEVWLPGQNTYREISSVSICGDFQ 360 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+R+R K +F HTLNGSG+AVGRCLIA+LEN DGSV +P VL PY+ Sbjct: 361 ARRMNARFRAQGGK-PEFVHTLNGSGLAVGRCLIAVLENGQQEDGSVDLPAVLHPYLGGN 419 Query: 421 AVIKKEHILE 430 I LE Sbjct: 420 TRINAAGGLE 429 >gi|153854269|ref|ZP_01995568.1| hypothetical protein DORLON_01562 [Dorea longicatena DSM 13814] gi|149753044|gb|EDM62975.1| hypothetical protein DORLON_01562 [Dorea longicatena DSM 13814] Length = 429 Score = 386 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 137/430 (31%), Positives = 222/430 (51%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NP+ + +K + + P + ++ LD+KNR + ++E +RA +N S Q Sbjct: 1 MLDIKFVRNNPDVVKQNIKNKFQDEKLPLVDEVIELDQKNRDIKGEVEALRAEKNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + + ++ L KEE EV LK+ + IPN+ VPIG Sbjct: 61 IGACMAQGKKEEAEELKRKVAESAARIEELSKEEKEVEEKLKQNMMIIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N+ I G+ H EI EA +D + A +++G F L G +A + + Sbjct: 121 DDSQNVEIEKFGEPFVPDFEIPYHTEIMEAFDGIDLESAGRVAGNGFYYLMGDIARIHSS 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VLAYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + ++E K LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTMLEEKQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 IWYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + F HTLN + VA R LIA LEN L DGSV IP L+PY Sbjct: 360 GDAQARRLGIRVKGEDGTKY-FAHTLNNTVVAPPRMLIAFLENNLQEDGSVKIPKALQPY 418 Query: 417 MNNLAVIKKE 426 M + + Sbjct: 419 MGGTEKLVPK 428 >gi|332296462|ref|YP_004438385.1| Seryl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] gi|332179565|gb|AEE15254.1| Seryl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] Length = 426 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 176/429 (41%), Positives = 262/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+++R++ E L +L KR ++ + + LD K + L +I ++R +N S +I Sbjct: 1 MLDIRFLREDFEILKDSLAKRGVKLNFSLDDLRELDLKLKNLRNEISNLREAQNKLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 N L ++ ++ +++ L + E + S K + +PN+ L +VP GT Sbjct: 61 SVLKK--NKEDATELVEKSRSIGDEISKLAENERGLDSQFKTMWYQLPNILLPDVPFGTD 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+++ GK H+++G+ LGL+D +RA K++G+RFS G A L RAL Sbjct: 119 ETQNVVVNYFGKPKEFDFEILPHWDLGKTLGLLDIERAGKVTGSRFSFHVGLGARLVRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLT 237 FM+D+H G+ E+ P LV + +MYGTGQ+PKF D++F C D +LIPT+EV +T Sbjct: 179 LNFMMDMH-RSDGFVELWPPYLVNEASMYGTGQLPKFRDELFKCADDPYFLIPTAEVPVT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + EI+ SLP+RF + FR EAGS G+D RG++RQHQF K ELV R EDS Sbjct: 238 NFFRDEILSDDSLPIRFCAYSACFRREAGSYGKDVRGIIRQHQFDKVELVVFCRPEDSMN 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E + A+++LK+L L YRV+ LC+GDLGF + KTYD+EV++A YREISSCS Sbjct: 298 ELSIITEQAQKVLKQLKLPYRVIELCSGDLGFGSAKTYDIEVYMAYSKNYREISSCSNFT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N RY+ K ++ HTLNGSG+A+GR L AI E Y + DG + +P VL PY+ Sbjct: 358 DFQARRANIRYKPKGGK-TRYVHTLNGSGLAIGRTLAAIYEYYQDKDGCLIVPDVLVPYI 416 Query: 418 NNLAVIKKE 426 + I+ + Sbjct: 417 -GMERIEPK 424 >gi|257386809|ref|YP_003176582.1| seryl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] gi|257169116|gb|ACV46875.1| seryl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] Length = 461 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 178/445 (40%), Positives = 258/445 (57%), Gaps = 22/445 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML Q++R+N E + A++++ + + IL +D + R L + +D+R +RN S++IG Sbjct: 1 MLSRQFVRENAEMVREAIEQKGVTGVDLDEILRIDAEWRELKAEGDDLRHQRNEVSSEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG +S LK +L +E E+ + L+ + IPNVP E VP+G Sbjct: 61 EYKREGEEEKAQDAIERSSELKAELQRVEDRADELEAKLEARLLEIPNVPHESVPVGEGE 120 Query: 120 NENILIRS--VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N+ + H+E+GE L ++DF+R K+SG F + G A LE A Sbjct: 121 DDNVERYREGFDDLRTLPEDVVPHYELGERLDILDFERGAKVSGGGFQFVKGEGARLEYA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWL 228 L QFM+D+H E Y +V PL V E+M GTGQ+PKFA+D + D WL Sbjct: 181 LIQFMLDVH-REQEYIDVFPPLPVNSESMRGTGQLPKFAEDAYRIEARQDDEYDDDDLWL 239 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 +PT+EV +TN+Y EI+ LP++ +P+FR EAG G +TRG +R HQF K ELV+ Sbjct: 240 LPTAEVPVTNMYRDEILLDDDLPIKHQAFSPNFRREAGEHGTETRGYVRVHQFNKVELVN 299 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---- 344 R E+S+ E +LS AEE+L RLDL YRV+ +CTGD+GF+ K YD+EVW G Sbjct: 300 FVRPENSYERLEGLLSEAEEVLDRLDLPYRVLDMCTGDMGFTQAKKYDIEVWAPGDDMDD 359 Query: 345 -----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 + E+SS S +FQ+RR YR +S ++ HTLNGSGVAV R ++AI+E Sbjct: 360 GPEEGGRWLEVSSISNFEDFQARRAGIHYRPERHESAEYLHTLNGSGVAVPRVMVAIMEY 419 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIK 424 Y N DG++T+P LRPYM VI+ Sbjct: 420 YQNDDGTITVPEPLRPYMGGQEVIE 444 >gi|254413141|ref|ZP_05026913.1| seryl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] gi|196180305|gb|EDX75297.1| seryl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] Length = 427 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 191/429 (44%), Positives = 262/429 (61%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR+NP+ + L+KR + + IL L+++ R L ++AR N IG Sbjct: 1 MLDLKQIRENPQSVQKRLEKRGAGQYDLQPILDLNQRQRELETSRSRLQARSNEIGKLIG 60 Query: 60 QAIAEGNLSLV---DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 Q I G+ L+ E + +K Q+ LE +E E+ + ++ L+ +PN+P P+G Sbjct: 61 QKIKAGSPPDAPETQQLREEGNQVKTQISELEPQEKELKAEIEALLLSLPNLPSPSTPVG 120 Query: 117 TSANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 S EN+ +R + H+EIGE LG+++F+RA K++ +RF L G A LE Sbjct: 121 QSEAENVEVRRWGDEYIPQNDKILPHWEIGETLGILNFERAVKVAQSRFVSLIGVGAALE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEV 234 RAL FM+D GY EV P+L+ ++ TGQ+PKFA++ F C +D WL PT+EV Sbjct: 181 RALISFMLDRQI-AAGYVEVIPPILINSRSLTATGQLPKFAEESFKCDSDDLWLSPTAEV 239 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 LTNLY EI+++ LP+ P FR EAGS GRDT+G++R HQF K ELV I Sbjct: 240 PLTNLYRDEILDASQLPIYHCAYTPCFRREAGSYGRDTKGLIRLHQFNKVELVKIVHPST 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S EHE+++ A IL+ L L YRV+ LCTGDLGFSA K YDLEVWL YREISSCS Sbjct: 300 SEAEHEKLVENAAAILEALKLPYRVIELCTGDLGFSATKCYDLEVWLPSSGKYREISSCS 359 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 CG+FQ+RR + R+++ K +F HTLNGSG+AVGR L AILENY +G+V IP VL Sbjct: 360 NCGDFQARRGSLRFKEAGKKGTQFVHTLNGSGLAVGRTLSAILENYQQPNGTVKIPEVLH 419 Query: 415 PYMNNLAVI 423 YM V+ Sbjct: 420 SYM-GREVL 427 >gi|225026108|ref|ZP_03715300.1| hypothetical protein EUBHAL_00349 [Eubacterium hallii DSM 3353] gi|224956569|gb|EEG37778.1| hypothetical protein EUBHAL_00349 [Eubacterium hallii DSM 3353] Length = 428 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 142/429 (33%), Positives = 223/429 (51%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++ + + P + ++ LD + R ++ +D+R+ R S Q Sbjct: 1 MLDLKFVRENPEVVKQNIRNKFQDEKLPLVDEVIELDAQRRATQQEADDLRSNRKKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G DA+K + + E+L LEK E E+ +KK++ IPN+ VPIG Sbjct: 61 IGALMAQGKKEEADAVKEQVTKNAERLAELEKLEAELGEKVKKIMMIIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H +I E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIQKYGEPFVPDFEVPYHTDIMERFDGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + ++ S +LP T+ +P FR E G+ G + RG+ R HQF K E++ + EDS Sbjct: 240 IGKFIDTVLPSDTLPRTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCEPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSMDIPVRTLECCSGDLADLKVKSIDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R K F HTLN + VA R LIA LEN LN DGSV IP VLRPY Sbjct: 360 GDAQARRLKIRVTGEKGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVRIPEVLRPY 417 Query: 417 MNNLAVIKK 425 M V+ Sbjct: 418 MGGKEVLVP 426 >gi|154503064|ref|ZP_02040124.1| hypothetical protein RUMGNA_00886 [Ruminococcus gnavus ATCC 29149] gi|153796305|gb|EDN78725.1| hypothetical protein RUMGNA_00886 [Ruminococcus gnavus ATCC 29149] Length = 433 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 145/430 (33%), Positives = 226/430 (52%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NPE + +K + + P + +L LD+KNR + ++E +RA +N S Q Sbjct: 6 MLDIKFVRSNPEVVKQNIKNKFQDSKLPLVDEVLELDQKNREIKGEVEALRAEKNKTSKQ 65 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + + +++ L EE EV +KK++ IPN+ VPIG Sbjct: 66 IGAMMAQGKKEEAEELKRKVTESADKMEALSAEEKEVEEKIKKIMMTIPNIIDPSVPIGK 125 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI E +D D A K++G F L G +A L A Sbjct: 126 DDSENVELERFGEPVVPDFEVPYHTEIMERFNGIDLDSARKVAGNGFYYLMGDIARLHSA 185 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 186 VISYARDFMI-NRGFTYCIPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 244 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + ++ + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 245 IGKFIDTLLPEEQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESM 304 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 305 DWYEKLWKNTVDLFRSMDIPVRTLECCSGDLADLKVKSVDVEAWSPRQQKYFEVGSCSNL 364 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + K F HTLN + VA R LIA LEN L ADGSV IP LRPY Sbjct: 365 GDAQARRLGIRVKGADGK--YFAHTLNNTVVAPPRMLIAFLENNLQADGSVKIPEALRPY 422 Query: 417 MNNLAVIKKE 426 M AVI+ + Sbjct: 423 MGGNAVIEPK 432 >gi|227489079|ref|ZP_03919395.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227543355|ref|ZP_03973404.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] gi|227090960|gb|EEI26272.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227180860|gb|EEI61832.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] Length = 418 Score = 384 bits (987), Expect = e-104, Method: Composition-based stats. Identities = 149/427 (34%), Positives = 244/427 (57%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NP+ + + + R +P + +L+ DE R I+K + +R +N +IG Sbjct: 1 MIDLKFLRENPDVVRESQRTRGEDPSLVDKLLAADETRRDAIQKADQLRQEQNGFGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + + AL E++ LK +L E + + + + + NV G Sbjct: 61 QA----SPAERPALIEESTALKAKLKDAEAAQKQAEQDVFDIQMQLGNVVEGAPAGGEDD 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + VG+K + ++H +I E LG++D +R K+SG+RF L G A L+ A+ Sbjct: 117 FIVVEE--VGEKTTFDFEPKDHLDIAENLGILDMERGAKVSGSRFYFLKGLGAQLQLAMM 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 EHG+T + P++VR E M GTG + + +D+++ D ++L+ TSEV+L Sbjct: 175 NLAAQKAI-EHGFTLMITPVIVRPETMQGTGFLGQHSDEIYYLQEDNQYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EII+ PL + + FR EAGS G+DTRG++R HQF K E+ + ED+ + Sbjct: 234 YHSDEIIDLSQGPLHYAGWSSCFRREAGSYGKDTRGIIRVHQFDKLEMFVYCKPEDAEAQ 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ +L+ +++L +++ YR++ + GDLG SA + +D E W+ QN YRE++S S C Sbjct: 294 HQALLAMEKDMLAAIEVPYRIIDIAGGDLGSSAARKFDTEAWIPTQNTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD + + + TLNG+ +A R L+AILEN+ ADGSV IP LRP+M Sbjct: 354 FQARRLKIRYRDEDGR-TQIAATLNGT-LATTRWLVAILENHQQADGSVIIPAALRPFMG 411 Query: 419 NLAVIKK 425 + I K Sbjct: 412 GIERITK 418 >gi|298245535|ref|ZP_06969341.1| seryl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] gi|297553016|gb|EFH86881.1| seryl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] Length = 428 Score = 384 bits (987), Expect = e-104, Method: Composition-based stats. Identities = 153/430 (35%), Positives = 242/430 (56%), Gaps = 5/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+ +IR N + + A + ++ +L LD + L +++E+ RA++N+ S +I Q Sbjct: 1 MLDLTFIRTNTDAVKEAARLKNNPIDINALLELDRRVVSLQQEVEEARAQQNALSKKIQQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E N+ L + + L E + E ++ + + +PN+P P+G + Sbjct: 61 AAKEKNVELRNQYIAQGKQLSEAIKEKEPLLAQLQEERYQQLLLVPNIPDPSTPVGKDED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I+ G+KP+ + +H+++ + L ++D +RA K++G+R L G A LE AL Sbjct: 121 DNVPIKYWGEKPNFAFPALDHYDLMQKLEMVDIERAVKVAGSRSYSLKGAAARLELALMN 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 F D S GYT + P + RD A G GQ PK D ++ +L+ T+EVS+T + Sbjct: 181 FAFDR-LSRKGYTPIIVPSMARDFAFVGNGQFPKGRDQVYEIEGQDLFLVGTAEVSITGM 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFT 297 Y EI++++ LPL + +P FR EAG+ G+DTRG+ R HQF K E I + S Sbjct: 240 YKDEILKAEELPLTYVGYSPCFRQEAGTYGKDTRGVFRIHQFNKVEQYIICEADHAVSVQ 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E + AEE+++ L+L YR+V++CTGD+G +D+E W+ +N YRE SCS Sbjct: 300 WFEELERNAEELIQALELPYRIVNVCTGDMGDGKVGMHDIECWVPSENRYRETHSCSYFH 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RYRD K ++F HTLN + +A R LI ++EN+ DGSV IP LRPYM Sbjct: 360 DWQARRANIRYRDAEGK-VRFVHTLNNTAIASPRILIPLIENHQQPDGSVRIPEALRPYM 418 Query: 418 NNLAVIKKEH 427 I+ Sbjct: 419 GGQDYIRPRQ 428 >gi|225418653|ref|ZP_03761842.1| hypothetical protein CLOSTASPAR_05877 [Clostridium asparagiforme DSM 15981] gi|225041824|gb|EEG52070.1| hypothetical protein CLOSTASPAR_05877 [Clostridium asparagiforme DSM 15981] Length = 426 Score = 384 bits (987), Expect = e-104, Method: Composition-based stats. Identities = 141/428 (32%), Positives = 220/428 (51%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NP+ + +K + + P + ++ LD K+R K+ +D+RA RN S Q Sbjct: 1 MLDLKFVRENPDIVKQNIKNKFQDGKLPLVDEVIELDAKSRATQKEADDLRASRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + +G +A+K + S ++L L+ E E+ + K++ IPN+ VPIG Sbjct: 61 IGQLMGQGKKEEAEAVKQQVSANSDRLSELQALESELSEKITKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEVERFGEPVVPDFEIPYHTEIMERFNGIDLDAARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I LPL T+ +P FR E G+ G + RG+ R HQF K E++ + E+S Sbjct: 240 IGKFIDTITPESKLPLTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCTPEESP 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYEKLWKNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + HTLN + VA R LIA LEN L ADGSV IP LRPY Sbjct: 360 GDAQARRLKIRVQGEDGGKY-LAHTLNNTVVAPPRMLIAFLENNLQADGSVRIPEALRPY 418 Query: 417 MNNLAVIK 424 M + I+ Sbjct: 419 MGGMEAIR 426 >gi|119357562|ref|YP_912206.1| seryl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] gi|166228638|sp|A1BHA5|SYS_CHLPD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|119354911|gb|ABL65782.1| seryl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] Length = 431 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 170/423 (40%), Positives = 262/423 (61%), Gaps = 6/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI ++RQN ++ L+ R L +P+ +L D+ R L+++ ++++A+RN S + Sbjct: 1 MLDITYVRQNLAEIESMLQNRQLASEKPRLRQLLEYDKNRRELVQRSDEMKAQRNKVSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G S + L + + +++ +++ ++ S +++++ +PN E VP G Sbjct: 61 IADIKRTGQGSG-EELIRQMKEVSDEITMMDATLSKLASDIEEILLSLPNRLHESVPTGK 119 Query: 118 SANENILIR-SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 A +N++ + V + H E+G +LG++DF+R K+SGA F V G A LER Sbjct: 120 CAEDNVICKAPVPYLHLLDFPIKNHLELGRSLGILDFERGAKISGAGFPVYIGKGARLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL FM+D HT HG+TEV P V E++ GTGQ PKFAD ++ D + IPT+EV Sbjct: 180 ALINFMLDYHTDHHGFTEVFPPFFVNQESLRGTGQWPKFADQVYHIEEDNLYAIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNL+ +E+I+++ LP+ + + FR EAGS G+DTRG LR HQF K E+V TR E+S Sbjct: 240 VTNLHRNEMIDAERLPVSYVAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEES 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E E++L AE IL+ L + YRV+ LC+GD+ +A K YD+EVW + Y E SSCS Sbjct: 300 YQELEKILMSAEAILQALMIPYRVLLLCSGDISANATKCYDIEVWSPAEEKYLEASSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RRMN R++ + +F HTLNGSG+A R ++++LE+Y N DGS+TIP LRP Sbjct: 360 FEDYQARRMNIRFKADSRSKPEFVHTLNGSGLATSRLMVSLLEHYQNRDGSITIPEALRP 419 Query: 416 YMN 418 Y Sbjct: 420 YTG 422 >gi|146298609|ref|YP_001193200.1| seryl-tRNA synthetase [Flavobacterium johnsoniae UW101] gi|146153027|gb|ABQ03881.1| seryl-tRNA synthetase [Flavobacterium johnsoniae UW101] Length = 423 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 155/426 (36%), Positives = 240/426 (56%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I +IR+N E + AL KR+++ + E ++ LDE R ++++ A N S I Sbjct: 1 MLQIAFIRENQEKVIKALAKRNIDAKSVVEEVVQLDENRRAAQVELDNTLAESNKLSKDI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ + G LK +T +LKE+ L ++ + L + +PN+P + VP G + Sbjct: 61 GELMKAGEKVKAAILKEKTVSLKEKSKELGEKAEALAVELTNKLYTLPNLPADIVPEGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N+ + G+ P ++ H+E+ + ++DF+ K++GA F V G A L+RAL Sbjct: 121 PDDNLNVFEEGEIPVLHEGAQPHWELVKKYDIIDFELGVKITGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T GY EV P LV + + YGTGQ+P M+ D +LIPT+EV +T Sbjct: 181 INYFLDKNT-AAGYNEVQVPHLVNEASGYGTGQLPDKEGQMYHAGVDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+ I+ LP+ T P FR EAGS G RG+ R HQF K E+V + ++S+ Sbjct: 240 NLFRDVILNESELPILHTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRVEHPDNSYA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + IL+ L L YR++ LC GD+GF++ TYD EV+ Q+ + EISS S Sbjct: 300 ALDGMVEHVKNILQELKLPYRILRLCGGDMGFTSALTYDFEVFSTAQDRWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R++D + K+ + HTLNGS +A+ R L ILENY +G + IP VLRPY Sbjct: 360 TFQANRLKLRFKDKDGKN-QLAHTLNGSSLALPRVLAGILENYQTPEG-IVIPEVLRPYC 417 Query: 418 NNLAVI 423 +I Sbjct: 418 -GFDII 422 >gi|331002452|ref|ZP_08325970.1| seryl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] gi|330410268|gb|EGG89702.1| seryl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] Length = 426 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 145/428 (33%), Positives = 226/428 (52%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+++R+NP+ + +K + + + + ++ LDEK R + +++R++RN S + Sbjct: 1 MIDIKFLRENPDIVRQNIKNKFQDFKLPMVDEVIELDEKLRKTKAEADELRSKRNKISKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K +++ E L LE E E+ +KK++ IPN+ VPIG Sbjct: 61 IGALMAQGKREEAEQVKASVASIGETLAGLEPLEAELEEKVKKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H +I E L +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIEKFGEPFVPEFEIPYHTDIMEKLSGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D E G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-ERGFTYCVPPFMIRAEVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + E LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTLNEEAKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYEKLWQNTVDLFRSLDVPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ QSRR+ R +D N F HTLN + VA R LIA LEN LN DGS+ IP LRPY Sbjct: 360 GDAQSRRLRIRVKDENGNKY-FAHTLNNTVVAPPRMLIAFLENNLNEDGSIRIPVALRPY 418 Query: 417 MNNLAVIK 424 M VIK Sbjct: 419 MGGKEVIK 426 >gi|302383732|ref|YP_003819555.1| seryl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302194360|gb|ADL01932.1| seryl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 471 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 211/467 (45%), Positives = 278/467 (59%), Gaps = 47/467 (10%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M DI+ IR+ P+ R +E ILSLD R +D ARRN+ S Sbjct: 1 MHDIRAIRETPDTFVAGWSARGVEDAKALVAEILSLDTALRAAQTAGQDALARRNATSKL 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG A+ + +++ D LK E LK ++ E E + ++L+ L++ N+ ++VP G Sbjct: 61 IGAAMGKKDMAEADRLKAEVEGLKAEIAAAEAVEADKGTALRDLLAAQKNLAADDVPDGE 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+ + G +P +++H ++GEALGL+DF+ A ++SGARF+VL G LA LERA Sbjct: 121 DEAGNVEVSVWG-EPRRTGPAKDHADLGEALGLLDFEAAARMSGARFAVLKGGLARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD------------------- 218 +GQFM+DL T+EHGY EV+ P LV+D+AM+GTGQ+PKF +D Sbjct: 180 IGQFMLDLQTTEHGYLEVNPPYLVKDDAMFGTGQLPKFWEDLFQMPLEQRAEIERTLKAA 239 Query: 219 ------------------------MFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 M RWLIPT+EVSLTNL +I LPLR Sbjct: 240 FAAGVHLDGFETLSDAEFQEMGKRMTYFEGRRWLIPTAEVSLTNLVREQITAEDELPLRL 299 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 T L P FR+EAGSAGRDTRG++RQHQF K ELVSIT E S EHERM +CAE +L+RL Sbjct: 300 TALTPCFRAEAGSAGRDTRGLIRQHQFHKVELVSITTPEASDDEHERMTTCAETVLQRLG 359 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK 374 L YR + LC GD+GFSA KT+DLEVWL Q YREISS S CG+FQ+RRM++R++ Sbjct: 360 LPYRRMLLCKGDMGFSARKTFDLEVWLPSQGAYREISSVSNCGDFQARRMDARFKRAGGG 419 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLA 421 +F HTLNGSG+AVGR L+AI+ENY + G + P L PYM L Sbjct: 420 KPEFVHTLNGSGLAVGRTLVAIMENYQDEGGRIAAPEALVPYMGGLT 466 >gi|118587514|ref|ZP_01544938.1| seryl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163] gi|118431965|gb|EAV38707.1| seryl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163] Length = 439 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 190/439 (43%), Positives = 266/439 (60%), Gaps = 14/439 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N + + L R++ + + +L+ DEK R LI+K E ++A+RN S QIG Sbjct: 1 MLDIKYLRNNRDEANQRLIDRNVEDGVLDKLLADDEKRRSLIRKAEQLKAKRNQVSDQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + S ++ T+ +Q+ L+K+ + S+ + +PN+ VP+G Sbjct: 61 AAKRAKDNSAAQKAISDMQTVADQIKDLDKQLSAIEESVHTQAAHLPNLADPRVPVGPDD 120 Query: 120 NENILIRSVGK---------KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + N+ R + HFEIGE LG++DF R K+SGARF G Sbjct: 121 SYNVEQRKWQPTDLQGRPAAFSKTPTWLKAHFEIGEDLGILDFQRGAKVSGARFLYYVGA 180 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWL 228 A LERA+ FM+D H GYTE+ P +V +E+MY TGQ PKF DD + + Sbjct: 181 GARLERAVYNFMLDEH-RREGYTELLTPYMVTNESMYATGQFPKFVDDAYEVGKNQSMTM 239 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV+L N E+++ LPL T L+P+FR EAG+AG+DTRG++R HQF K E+V Sbjct: 240 IPTAEVALVNWRRDEVLDESELPLYITALSPAFRQEAGAAGKDTRGLIRLHQFNKVEMVK 299 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 T+ EDS+ E E+M AE IL++L+L Y V+ L TGD+GF + TYDLEVW Q+ YR Sbjct: 300 FTKPEDSYNELEKMTVDAENILQKLELPYHVIRLSTGDMGFGSAMTYDLEVWFPTQDKYR 359 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISS S +FQ+RR + +YRD + L+F HTLNGSG+AVGR + AILENY N DG++T Sbjct: 360 EISSVSNDEDFQARRGHIQYRDSKTGKLRFVHTLNGSGLAVGRTVAAILENYQNEDGTIT 419 Query: 409 IPTVLRPYMNNLAVIKKEH 427 IP VLRPY I KE+ Sbjct: 420 IPEVLRPYF-GEDKISKEN 437 >gi|16126242|ref|NP_420806.1| seryl-tRNA synthetase [Caulobacter crescentus CB15] gi|221235015|ref|YP_002517451.1| seryl-tRNA synthetase [Caulobacter crescentus NA1000] gi|30173208|sp|Q9A6T4|SYS_CAUCR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783015|sp|B8GX53|SYS_CAUCN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|13423468|gb|AAK23974.1| seryl-tRNA synthetase [Caulobacter crescentus CB15] gi|220964187|gb|ACL95543.1| seryl-tRNA synthetase [Caulobacter crescentus NA1000] Length = 482 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 213/481 (44%), Positives = 288/481 (59%), Gaps = 55/481 (11%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NP+ D + ++ + LD + R +++ +A+RN +S IG Sbjct: 1 MHDIKAIRENPKAYDRHWSGKGRSGAADEAVRLDAELRAAQTTLQEAQAKRNESSKLIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+ + + L E +LK + + E+ LK L++ +PN+P EVP G + Sbjct: 61 AKAKKDEAEAARLMAEVESLKGVMATAAEAENLADGQLKDLLASLPNIPAPEVPAGEDEH 120 Query: 121 ENILIRSVGKKPSAI----HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 N+ R G + ++H ++G ALG MDF+ A ++SGARF VL +A LER Sbjct: 121 GNLEQRRWGDATKLPAGKLNKPKDHVDLGAALGGMDFEAAARMSGARFVVLKKEIARLER 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----------- 225 A+GQFM+DL T EHGYTEVS PLLV+D A+YGTGQ+PKFADD+F TT Sbjct: 181 AIGQFMLDLQTVEHGYTEVSPPLLVKDHALYGTGQLPKFADDLFATTSFDLGRYDDEFAR 240 Query: 226 ----------------------------------------RWLIPTSEVSLTNLYSHEII 245 WLIPT+EVSLTN+ +++ Sbjct: 241 QAAAIGSALDKLSDEHRNQLKYLLSKEYIHASVQNALERSHWLIPTAEVSLTNIVREQLV 300 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LP+R T L PSFR+EAGSAGRDTRGM+RQHQF+K ELVSIT + S EH+RM+ C Sbjct: 301 AEEELPMRLTALTPSFRAEAGSAGRDTRGMIRQHQFYKVELVSITTPDQSEAEHQRMVEC 360 Query: 306 AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMN 365 AE +LK+L+L +R + LCTGD+GF A KTYDLEVWL Q++YREISSCS CG+FQ+RRM+ Sbjct: 361 AETVLKKLELPFRTMLLCTGDMGFGAKKTYDLEVWLPSQDMYREISSCSNCGDFQARRMD 420 Query: 366 SRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +RYR K F HTLNGSG+AVGR L+A+LENY + G + IP L+PYM + I Sbjct: 421 ARYRKTGEKGGHFVHTLNGSGLAVGRTLVAVLENYQDEGGRIHIPAALQPYMGGVTHIGG 480 Query: 426 E 426 + Sbjct: 481 Q 481 >gi|307297951|ref|ZP_07577755.1| seryl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916037|gb|EFN46420.1| seryl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 422 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 186/425 (43%), Positives = 269/425 (63%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ IR+NPE + AL+ R + + I+ L+ K R ++ +E +A RNS S++I Sbjct: 1 MIDVRLIRENPEIVRRALECRQMTSELLDEIVYLESKRREALQVVEQKKAERNSISSEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A A ++SL +L + ++ L+ + ++ LKK + +PN+P P+G S Sbjct: 61 RAKASKDVSLSLSLMERAKEISSEVKELDLQTSQIEEELKKKLLYLPNIPSSTTPVGKSE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N++IR G+ R H++ G GL+DF+RA K+SGARF++L A LERA+ Sbjct: 121 EDNVVIRMWGEPRKVDFEIRPHWDYGPETGLIDFERAAKISGARFTILRRDFARLERAIA 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FM+DLH GY EV+ P +V+ + M TGQ+PKF ++ + ++IPT+EV L + Sbjct: 181 NFMLDLH-HSKGYEEVALPFMVKRDTMQATGQLPKFEEEAYRIDPDDMFMIPTAEVPLVS 239 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+ LP ++T + FR EAGS G+D RGM+R HQF K ELV T +DS+ Sbjct: 240 QHMDEIL-EGDLPKKYTAYSACFRREAGSYGKDVRGMIRVHQFDKVELVWFTHPDDSYDA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E + + AE++L++L+L YRVVSLCTGD+GF+A KTYDLEVWL N YREISSCS + Sbjct: 299 LENLTADAEDVLRKLELPYRVVSLCTGDIGFAAAKTYDLEVWLPSYNTYREISSCSNVED 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ RR N R+RD ++K LKF H LNGSG+AVGR L+AI+ENY DG + +P L PYM Sbjct: 359 FQPRRANIRFRDVDNK-LKFVHCLNGSGLAVGRTLVAIVENYQRRDGKIDVPKALVPYMR 417 Query: 419 NLAVI 423 VI Sbjct: 418 -QEVI 421 >gi|193214281|ref|YP_001995480.1| seryl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] gi|238692702|sp|B3QV79|SYS_CHLT3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|193087758|gb|ACF13033.1| seryl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] Length = 427 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 161/428 (37%), Positives = 259/428 (60%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NP+ + L+ R + + ++ D + + + + + ++A RNS + + Sbjct: 1 MLDIKYVRENPDAVKKMLEMRLLASESKKIDELIRYDSERKAKVTESDTLKAMRNSVTQE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + E S D L E + +++ ++ E E+ + ++L+ +PN+ E VP G Sbjct: 61 IAKIKREKTGS-ADELIAEMKIVSDRISEIDAELREIETKQEELLLAVPNILHESVPEGK 119 Query: 118 SANENILIRSVG-KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 SA +N++ + V K ++H E+G++LG++DF+R K++GA F + G A LER Sbjct: 120 SAADNVVYKEVMDCKREFDFKPKDHIELGKSLGMLDFERGAKIAGAGFPLYIGKGASLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVS 235 AL FM+DLH +HGY EV P V +++ GTGQ PKFAD ++ D + IPT+EV Sbjct: 180 ALINFMLDLHLEKHGYKEVFPPFFVNRDSLRGTGQWPKFADQVYYMNDDDIYAIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TN++ E+++SK LP+++ + FR EAGS G+DT+G LR HQF K E+V E S Sbjct: 240 VTNMHRDEMLQSKELPIKYAAYSACFRREAGSYGKDTKGFLRVHQFNKVEMVKFVLPETS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E E +L AE++LK L++ YRV+ LC+GD+ +A K YD+EVW + + E SSCS Sbjct: 300 YDELEALLGDAEDVLKALEIPYRVLLLCSGDISANAAKCYDIEVWSPAEEKFLEASSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RR R+R +F HTLNGSG+A R +++++ENY DG + +P VL+ Sbjct: 360 FEDYQARRAQIRFRRQPKAKPEFVHTLNGSGLATSRLMVSLMENYQTPDGKIQVPKVLQK 419 Query: 416 YMNNLAVI 423 YM VI Sbjct: 420 YM-GCEVI 426 >gi|160939797|ref|ZP_02087144.1| hypothetical protein CLOBOL_04688 [Clostridium bolteae ATCC BAA-613] gi|158437231|gb|EDP14996.1| hypothetical protein CLOBOL_04688 [Clostridium bolteae ATCC BAA-613] Length = 429 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 140/431 (32%), Positives = 224/431 (51%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NP+ + +K + + P + ++SLD + R K+ +D+RA RN S Q Sbjct: 1 MLDLRFVRENPDIVKQNIKNKFQDSKLPLVDEVISLDTEARATQKEADDLRASRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G +A+K E S +L LE++E ++ + K++ IPN+ VPIG Sbjct: 61 IGMLMGQGKKDEAEAVKQEVSANSARLAELEEKEGQLSEKITKIMMTIPNIIDPTVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G H +I E +D D A +++G F L G +A L A Sbjct: 121 DDSENVEVERFGDPVVPDFEIPYHTDIMERFNGIDLDAARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I + LPL T+ +P FR E G+ G + RG+ R HQF K E++ + R E+S Sbjct: 240 IGKFIDTITPEQQLPLTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCRPEESP 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYEKLWQNTVDLFRSLDVPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + HTLN + VA R LIA LEN L ADGSV IP VLRPY Sbjct: 360 GDAQARRLRIRVQGEDGGKY-LAHTLNNTVVAPPRMLIAFLENNLQADGSVKIPEVLRPY 418 Query: 417 MNNLAVIKKEH 427 M + ++ ++ Sbjct: 419 MGGMEMMVPKN 429 >gi|313904712|ref|ZP_07838086.1| seryl-tRNA synthetase [Eubacterium cellulosolvens 6] gi|313470505|gb|EFR65833.1| seryl-tRNA synthetase [Eubacterium cellulosolvens 6] Length = 434 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 134/430 (31%), Positives = 229/430 (53%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+++R+NP+ + +KK+ + P + ++ D++ R +++K E ++A +N S + Sbjct: 1 MIDIKFLRENPDVVKENIKKKFQDRKLPMVDEVIEFDKERREILQKKEALQAEKNKISKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ + +G + +K + + + +++P LE+ V +KK + IPN+ VPIG Sbjct: 61 IGKLMGQGKKDEANEVKAKVAEISKEIPALEERGRVVDEEIKKRMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E+ +D D A +++G F L G +A L A Sbjct: 121 DDSENVEIQKYGEPVVPDFEVPYHTEIMESFDGIDMDAAGRVAGNGFYYLLGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T V P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VLSYGRDFMI-DRGFTYVIPPYMIRSAVVNGVMSFDEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII + LP+ T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGRFIDEIIPEQKLPITLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E++ + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 DWYEKLWQNTVDFFRSLDVPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + + +TLN + VA R LIA LEN LNADG+++IP LRPY Sbjct: 360 GDAQARRLKIRVQGEDGEKY-LANTLNNTCVAPPRMLIAFLENNLNADGTISIPVPLRPY 418 Query: 417 MNNLAVIKKE 426 M + Sbjct: 419 MGGKEKLVPR 428 >gi|153811956|ref|ZP_01964624.1| hypothetical protein RUMOBE_02349 [Ruminococcus obeum ATCC 29174] gi|149831855|gb|EDM86941.1| hypothetical protein RUMOBE_02349 [Ruminococcus obeum ATCC 29174] Length = 431 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 138/430 (32%), Positives = 224/430 (52%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + ++ + + + ++ LD++NR + +++E +RA RN S Q Sbjct: 1 MLDIKFVRENPEIVKQNIRNKFQDNKLELVDKVIELDKENREIKQEVEALRAERNKTSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + + ++ L E EV L K + IPN+ VPIG Sbjct: 61 IGALMAQGKRDEAEEVKKQVAASGARIDELSAREKEVEEELLKNMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H +I E+ +D D A +++G F L G +A L A Sbjct: 121 DDSENVEIEKFGEPVVPDFEVPYHTDIMESFDGIDLDSARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VIAYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +I+ + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDQIVPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESP 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSLDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K HTLN + VA R LIA LEN LNADGSV+IP L+PY Sbjct: 360 GDAQARRLRIRVNGKDGKKY-LAHTLNNTVVAPPRMLIAFLENNLNADGSVSIPEALQPY 418 Query: 417 MNNLAVIKKE 426 M + I+K+ Sbjct: 419 MGGMKRIEKK 428 >gi|116490520|ref|YP_810064.1| seryl-tRNA synthetase [Oenococcus oeni PSU-1] gi|290889920|ref|ZP_06553007.1| hypothetical protein AWRIB429_0397 [Oenococcus oeni AWRIB429] gi|122277293|sp|Q04GM3|SYS_OENOB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116091245|gb|ABJ56399.1| seryl-tRNA synthetase [Oenococcus oeni PSU-1] gi|290480530|gb|EFD89167.1| hypothetical protein AWRIB429_0397 [Oenococcus oeni AWRIB429] Length = 439 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 190/439 (43%), Positives = 265/439 (60%), Gaps = 14/439 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R N + + L R++ + + +L+ DEK R LI+K E ++A+RN S QIG Sbjct: 1 MLDIKYLRNNRDEANQRLIDRNVEDGVLDKLLADDEKRRSLIRKAEQLKAKRNQVSDQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + S ++ T+ Q+ L+K+ + S+ + +PN+ VP+G Sbjct: 61 AAKRAKDNSAAQKAISDMQTVAGQIKDLDKQLSAIEESVHTQAAHLPNLADPRVPVGPDD 120 Query: 120 NENILIRSVGK---------KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + N+ R + HFEIGE LG++DF R K+SGARF G Sbjct: 121 SYNVEQRKWQPTDLQGRPAAFSKTPTWLKAHFEIGEDLGILDFQRGVKVSGARFLYYVGA 180 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWL 228 A LERA+ FM+D H GYTE+ P +V +E+MY TGQ PKF DD + + Sbjct: 181 GARLERAVYNFMLDEH-RREGYTELLTPYMVTNESMYATGQFPKFVDDAYEVGKNQSMTM 239 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 IPT+EV+L N E+++ LPL T L+P+FR EAG+AG+DTRG++R HQF K E+V Sbjct: 240 IPTAEVALVNWRRDEVLDESELPLYITALSPAFRQEAGAAGKDTRGLIRLHQFNKVEMVK 299 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 T+ EDS+ E E+M AE IL++L+L Y V+ L TGD+GF + TYDLEVW Q+ YR Sbjct: 300 FTKPEDSYNELEKMTVDAENILQKLELPYHVIRLSTGDMGFGSAMTYDLEVWFPTQDKYR 359 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 EISS S +FQ+RR + +YRD + L+F HTLNGSG+AVGR + AILENY N DG++T Sbjct: 360 EISSVSNDEDFQARRGHIQYRDSKTGKLRFVHTLNGSGLAVGRTVAAILENYQNEDGTIT 419 Query: 409 IPTVLRPYMNNLAVIKKEH 427 IP VLRPY I KE+ Sbjct: 420 IPEVLRPYF-GEDKISKEN 437 >gi|222480484|ref|YP_002566721.1| seryl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] gi|254783030|sp|B9LQZ7|SYS_HALLT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|222453386|gb|ACM57651.1| seryl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 456 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 173/444 (38%), Positives = 256/444 (57%), Gaps = 21/444 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML Q++R+NPE + AL + ++ + IL +DE+ R L + +D+R RN S+ IG+ Sbjct: 1 MLSRQFVRENPEVVREALDNKGVDVDLDRILDVDEEWRELKSRGDDLRHERNEVSSTIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + +K +L +E+ E+ + L++ + +P +P E VP+G + Sbjct: 61 LKQAGEEEAAQEAIERSQEVKSELQEIEERADELEAELEESLLELPQIPHESVPVGADES 120 Query: 121 ENILIRS--VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN+ R H+++GE L ++DF+R K++G F V G A LE AL Sbjct: 121 ENVERRREGFDDLREVPDNVEPHYDLGEELEILDFERGAKVAGGGFYVAKGDGARLEHAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLI 229 QFM+D+H E Y +V P+ V +M GTGQ+PKF +D + D WL+ Sbjct: 181 IQFMLDVH-REQDYRDVFPPIAVNSTSMRGTGQLPKFTEDAYRIEGTNEDAYDDDDLWLL 239 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TNL+ EI+ + LPL++ P+FR EAG G +TRG++R HQF K E+V+ Sbjct: 240 PTAEVPVTNLHRDEILLGEDLPLKYQAYTPNFRQEAGEHGTETRGIVRVHQFNKVEMVNF 299 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ----- 344 R E+S E ++ AEE+L+RL+L YR++ +CTGDLGF+ K YDLEVW Sbjct: 300 VRPEESHERFEGLVDEAEEVLRRLELPYRILEMCTGDLGFTQAKKYDLEVWAPADDMDEG 359 Query: 345 ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + E+SS S FQ+RR RYR+ + +S +F HTLNGSG+AV R ++AILE Y Sbjct: 360 PAEGGRWLEVSSVSNFEEFQARRAGIRYREEHHESAEFLHTLNGSGLAVPRIVVAILEYY 419 Query: 401 LNADGSVTIPTVLRPYMNNLAVIK 424 N DG+VT+P LRPYM VI+ Sbjct: 420 QNDDGTVTVPEALRPYMGGTEVIE 443 >gi|257052836|ref|YP_003130669.1| seryl-tRNA synthetase [Halorhabdus utahensis DSM 12940] gi|256691599|gb|ACV11936.1| seryl-tRNA synthetase [Halorhabdus utahensis DSM 12940] Length = 451 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 179/440 (40%), Positives = 259/440 (58%), Gaps = 14/440 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML Q++R++P + L R ++ + IL +DE+ R L + +D+R RN S++IG Sbjct: 1 MLSRQYVREHPGEVRETLAARGVDDVDLDAILEIDEEWRELKARGDDLRHDRNEVSSKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG+ + LK++L +E+ E+ L++ + IPN+P E VP G Sbjct: 61 ELKQEGDEEAAQEAIERSQELKDELQEVEERADELERELEERLLEIPNIPQEGVPEGEDE 120 Query: 120 NENILIRSVGKKPSAI--HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N+ R G + H+++GE L ++DF+R K+SG F L G A LE A Sbjct: 121 SDNVETRRWGFEDLRDLPEDVTPHYDLGEELDILDFERGAKVSGGGFYFLKGDAARLEHA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L QFM D+H E GY EV P+ V E+M GTGQ+PKFADD + + WL PT+EV + Sbjct: 181 LIQFMRDIH-REQGYEEVFPPIPVSSESMTGTGQLPKFADDAYKLEEEDLWLCPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y EI+ LPL+ P+FR EAG G +TRG++R HQF K ELV+ E+S Sbjct: 240 TNMYRDEILLDDDLPLKHQAYTPNFRQEAGEHGTETRGIVRVHQFNKVELVNFVEPEESD 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---------NLY 347 E +L AEE+L+RL+L YR++ LCTGDL F++ KTYD+EVW G + Sbjct: 300 ERLEGLLDEAEEVLRRLELPYRILELCTGDLTFASAKTYDVEVWAPGDDMEEGPTEGGRW 359 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 E+SS S +FQ+RR RYR +S ++ HTLN SGVA+ R L+AILE Y N DG+V Sbjct: 360 LEVSSASNFEDFQARRAGIRYRPERHESAEYLHTLNASGVALPRVLVAILEYYQNDDGTV 419 Query: 408 TIPTVLRPYMNNLAVIKKEH 427 T+P LRPY++ +I+ + Sbjct: 420 TVPEALRPYLDGQELIEGQD 439 >gi|163815000|ref|ZP_02206387.1| hypothetical protein COPEUT_01154 [Coprococcus eutactus ATCC 27759] gi|158449683|gb|EDP26678.1| hypothetical protein COPEUT_01154 [Coprococcus eutactus ATCC 27759] Length = 429 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 136/430 (31%), Positives = 225/430 (52%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+++R+NP+ + +K + P + ++ LD++ R ++ + +RA +N+ + Q Sbjct: 1 MIDIKFLRENPDVVKQNIKNKFQNDKLPLVDEVIELDKQARAAQQEADALRANKNTIAKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + + +K + + +L LE E E+ +KK++ IPN+ VPIG Sbjct: 61 IGSLMAQGKKAEAEEVKKQVAETSARLKELETLEPELKEKVKKIMMIIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ H +I E+LG +D D A K++G F L G +A L A Sbjct: 121 DDSENVEVQRYGEPVVPDFEIPYHADIMESLGGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 IISYARDFMI-DRGFTYCIPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + II + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTIIPEEELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSMDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + K HTLN + VA R LIA LEN L ADG V IP LRPY Sbjct: 360 GDAQARRLQIRVKGEDGKKY-LAHTLNNTVVAPPRMLIAFLENNLQADGRVRIPEKLRPY 418 Query: 417 MNNLAVIKKE 426 M ++K Sbjct: 419 MGGKEYLEKT 428 >gi|161349975|ref|NP_280742.2| seryl-tRNA synthetase [Halobacterium sp. NRC-1] gi|169236663|ref|YP_001689863.1| seryl-tRNA synthetase [Halobacterium salinarum R1] gi|30179880|sp|Q9HNJ8|SYS_HALSA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|229559949|sp|B0R6Z8|SYS_HALS3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|167727729|emb|CAP14517.1| serine--tRNA ligase [Halobacterium salinarum R1] Length = 460 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 175/444 (39%), Positives = 256/444 (57%), Gaps = 21/444 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML Q++R++PE + AL + ++ + IL +DE+ R L + +++R RN S++IG+ Sbjct: 1 MLSRQFVREHPEKVRDALDAKGVDADLDRILEVDEEWRELKARGDELRHDRNEVSSKIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G+ + LK++L +E ++ + L++L+ +P VP E+ P+G S Sbjct: 61 LKQAGDEDAAQEAIERSQALKDELADVEARADDLEAELERLLLTLPMVPDEDAPVGDSEA 120 Query: 121 ENILIRSVGKKPSAI--HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN+ R G H+++GE L ++DF+R K+SG F G A LE AL Sbjct: 121 ENVERRREGFDDRRDLPESVVPHYDLGEELDILDFERGAKVSGGGFYFSKGAGARLEHAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLI 229 QFM+D+H E GY +V P+ V +M GTGQ PKF +D + D WL+ Sbjct: 181 VQFMLDVH-REQGYEDVFPPMPVSARSMEGTGQFPKFVEDAYRIGGENDADYDDDDLWLL 239 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+Y EI+ LP++ +P+FR EAG G +TRG++R HQF K ELV+ Sbjct: 240 PTAEVPVTNMYRDEILLDDDLPVKHQAYSPNFRREAGEHGTETRGIVRVHQFNKVELVNF 299 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ----- 344 R EDS +L AE +L+RLDL YRV+ +CTGD+GF+ K YD+EVW G Sbjct: 300 VRPEDSAERFHGLLDEAEAVLRRLDLPYRVLEMCTGDMGFTQAKKYDIEVWAPGDDMDGG 359 Query: 345 ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + E+SS S +FQ+RR + +YR +S + HTLNGSGVAV R L+AILE Y Sbjct: 360 PEMGGRWLEVSSVSNFKDFQARRADIQYRPERHESAEHLHTLNGSGVAVPRVLVAILEYY 419 Query: 401 LNADGSVTIPTVLRPYMNNLAVIK 424 N DG+VT+P L+PYMN I+ Sbjct: 420 QNDDGTVTVPEALQPYMNGQTRIE 443 >gi|148245038|ref|YP_001219732.1| seryl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] gi|166223308|sp|A5CVL9|SYS_VESOH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|146326865|dbj|BAF62008.1| seryl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 429 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 189/430 (43%), Positives = 268/430 (62%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML + +R + + + ALKKR+ ++++ L+ + + ++++ RN S IG+ Sbjct: 1 MLSKKQLRLDMKAVANALKKRYFYFDVDHLIELESNRKKNQIETQNLQNLRNMQSKAIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + +L S L +L + + + S + ++ +PN+P VP G S Sbjct: 61 AKASG--EDIKSLLKNVSDLSTKLNLAKSNLQLIQSEIDVIVLSMPNIPHHSVPNGKSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI + GK + ++H ++G G +DF+ A K+SGARFSV+TG +A L RAL Q Sbjct: 119 DNIEVSKWGKLVNYDFDVKDHVDLGAMYG-LDFETAVKISGARFSVMTGKIARLHRALTQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--------RWLIPTS 232 FM+D H+ +GYTE P LV E++ GTGQ+PKF D+F T +LIPT Sbjct: 178 FMLDRHSEVNGYTEAYVPYLVNTESLIGTGQLPKFEADLFKTYLHGEKGETKTLYLIPTG 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TN+ II+ LPL+F T PSFRSEAGS GR TRG++RQHQF K ELV + + Sbjct: 238 EVPVTNMMRDMIIKENDLPLKFVTHTPSFRSEAGSYGRYTRGLIRQHQFEKVELVQVVKA 297 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 +DS+ E + + AE+IL+ L+L YR +SLC GDLGFSA KTYDLEVWL GQN+Y EISS Sbjct: 298 QDSYQALEVLTTHAEDILQALELPYRKISLCAGDLGFSATKTYDLEVWLPGQNVYCEISS 357 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RR+ RY++ + L+ HTLNGSG+AVGR L+A+LEN+ AD S+ IP V Sbjct: 358 CSCFEDFQARRLQLRYKNKETNKLELLHTLNGSGLAVGRTLVAVLENHQQADRSIKIPFV 417 Query: 413 LRPYMNNLAV 422 L+ YM L V Sbjct: 418 LQSYMGGLEV 427 >gi|291452730|ref|ZP_06592120.1| seryl-tRNA synthetase [Streptomyces albus J1074] gi|291355679|gb|EFE82581.1| seryl-tRNA synthetase [Streptomyces albus J1074] Length = 423 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 150/430 (34%), Positives = 240/430 (55%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++R+ + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + L + + E+ E K+L+ + N+ +VP+G Sbjct: 61 KATGDEKTE----LLKKAGELSAAVKAADAEKDEADQEAKQLLLRLGNLVHPDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + R+H E+GEALG +D +RA K+SG+RF LTG A LE A Sbjct: 117 DFAVLAKHGTIRDFAAEGFEPRDHLELGEALGAIDVERAAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I + G+T + P LVR AM GTG + + A+D++ D +L+ TSEV L Sbjct: 177 LVNAAIAQ-ATAAGFTPMLTPALVRPRAMEGTGFLGQAAEDVYHLEKDDFYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EIIE+ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S ED+ Sbjct: 236 AAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVEPEDAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L + L+ L+L ++V+ + + DLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHQRLLDWEIQWLQSLELPFQVIDVASADLGSSASRKFDCEAWIPTQGKYRELTSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R R K ++ TLNG+ AV R ++AILEN+ ADGSV +P VLRPY Sbjct: 356 TEFQARRLSVRMR--EGKKVQPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKKE 426 + + + Sbjct: 414 LGGRETLDPQ 423 >gi|217967764|ref|YP_002353270.1| seryl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] gi|226701462|sp|B8E0R9|SYS_DICTD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|217336863|gb|ACK42656.1| seryl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] Length = 425 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 148/431 (34%), Positives = 242/431 (56%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ +R+NPE + + R+L+P +YI+ LD K R L K+++++RA+RN S + Sbjct: 1 MIDIKILRENPEIMKENIILRNLDPQKYDVDYIIELDAKRRSLQKELDNLRAQRNKISQE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ + L E LKE++ L KE V L + +PN + P G Sbjct: 61 IGK----HQGEEREKLIKEAKILKEKIEELAKEYDNVEKELFSRLWQLPNFLSPKAPRGK 116 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N+ I+ G+ + ++H ++ L+DF+R +K++G+ F L LE A Sbjct: 117 DEKDNVEIKKWGEIKTFNFTPKDHLDLALLNDLVDFERGSKVTGSNFYYLKNEAVLLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 L + +ID E G+ P L R E + G G P+ + LI T+E++ Sbjct: 177 LFRLVIDTLLPE-GFKLFITPDLARMEIIDGIGFQPRGPEAQIYRVEDTDLGLIATAEIT 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L + EI++ LPL++ + FR+EAG+ GR RG+ R HQF K E+ I R EDS Sbjct: 236 LGGYHKDEILDELDLPLKYLGFSHCFRTEAGAYGRYNRGLYRVHQFSKAEIFIICRPEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 HE +L E+I ++L++ YRV+ +C+GDLG A + +D+E W+ G+ + E++SCS Sbjct: 296 EEMHEYILGLEEKIFQKLEIPYRVLDICSGDLGAPAARKFDIEAWMPGRGEFGEVTSCSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++Q+RR+N R+R + +++ H LNG+ +A+ R LIAI ENY DGS+ IP L+P Sbjct: 356 CTDYQARRLNIRFRRVTGE-VEYVHMLNGTAIAISRALIAIFENYQQEDGSILIPKALQP 414 Query: 416 YMNNLAVIKKE 426 Y+ ++ I+ + Sbjct: 415 YI-GISEIRPK 424 >gi|254430508|ref|ZP_05044211.1| seryl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197624961|gb|EDY37520.1| seryl-tRNA synthetase [Cyanobium sp. PCC 7001] Length = 425 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 185/427 (43%), Positives = 265/427 (62%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R +P + L +R L P + + + R L ++ ++A N ++GQ Sbjct: 1 MLDQRLLRDDPALIAAPLARRGLSPDLASLQQIALQQRDLQEQRSGLQAEGNRIGKEVGQ 60 Query: 61 AIAEGNLS---LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + V AL+ + +K+ + LE+ E ++ L++ + +PN+P VP GT Sbjct: 61 QIKAGAAAGGPEVKALRERGNAIKQDVAALEEREKDLQQQLQEALLALPNLPAAAVPDGT 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ ++ G P EH++I E LGL D +R+ +++ +RF L G A LERA Sbjct: 121 SEADNVEVKRWG-NPRQESGLLEHWQIAEQLGLFDTERSVRIAQSRFVTLLGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+D H GYTEV P+LV ++ +GQ+PKFA++ F C+ D WL PT+EV L Sbjct: 180 LISFMLDRH-GSRGYTEVMPPILVNSASLTASGQLPKFAEESFRCSGDDLWLTPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ E+I ++ LPL++ P FR EAGS GRDTRG++R HQF K EL TR + S Sbjct: 239 TSLHRDEVIPAEQLPLKYCAYTPCFRREAGSYGRDTRGLIRLHQFNKVELYWFTRPDHSA 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++ S AE IL+ L+L YR + LCTGDLGFSA +T+DLEVWL G YREISSCS C Sbjct: 299 EAHEQITSDAEAILEALELPYRRIELCTGDLGFSAARTFDLEVWLPGAGAYREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR + R++DP++KS + HTLNGSG+AVGR + A+LEN ADG+V +P L PY Sbjct: 359 GDFQARRASIRFKDPDTKSTQLVHTLNGSGLAVGRTMAALLENGQQADGTVRLPKALVPY 418 Query: 417 MNNLAVI 423 I Sbjct: 419 F-GAERI 424 >gi|254442001|ref|ZP_05055477.1| seryl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] gi|198256309|gb|EDY80617.1| seryl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] Length = 423 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 161/426 (37%), Positives = 241/426 (56%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D +++R+NP+ + + K+H++ + IL+LDEK R LI ++E +RA + + ++ Sbjct: 1 MIDPKFLRENPDAVRAGIAKKHIKCDLDAILALDEKRRELIAEVESLRAAQKPANNEMAN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G+ + + E + Q+ + E + + I IPN+P E VP G + Sbjct: 61 L-PKGSPEFIAKV-QEMKAVSGQVKAKDAELNAAEEEWNEAILNIPNLPDESVPEGRDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+++R G+ P+ + H++I ++D R TK+SGA F G A L R L Sbjct: 119 ENVVVREWGEIPTEAEYQQAHYDIDWIEQILDLRRGTKVSGAGFPFFVGDGAKLARGLIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTNL 239 F ++ G+ EV P V E+ TGQ+P M+ T + + IPT+EV LTN Sbjct: 179 FFLNEG-GNAGFQEVGVPFFVNAESATATGQLPDKEAQMYQTVEEGLYAIPTAEVPLTNF 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EIIE LP+ + FR EAGS G++ RG+ R HQF K EL+ + E S E Sbjct: 238 YRDEIIEEADLPIYRCGHSACFRREAGSYGKEVRGLNRVHQFDKVELLKWVKPETSMGEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E + + AE +L++L L +R + +C GD+GF+ CK YDLEVW AGQ + E+SSCS G+F Sbjct: 298 ETLRAYAESLLEKLGLPFRTLLMCGGDMGFTNCKQYDLEVWAAGQKRWLEVSSCSNFGSF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR RYR+ + + HTLNGSG+AV R +AILEN L ADG + IP L PY+ Sbjct: 358 QARRAKIRYRNSETGKPEILHTLNGSGLAVPRVFVAILENGLQADGRIRIPDALVPYV-G 416 Query: 420 LAVIKK 425 I+K Sbjct: 417 KEFIEK 422 >gi|295108598|emb|CBL22551.1| seryl-tRNA synthetase [Ruminococcus obeum A2-162] Length = 431 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 138/430 (32%), Positives = 223/430 (51%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + ++ + + + +++LD++NR + +++E +RA RN S Q Sbjct: 1 MLDIKFVRENPEIVKQNIRNKFQDNKLELVDKVIALDKENREIKQEVEALRAERNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + + ++ L E EV L K + IPN+ VPIG Sbjct: 61 IGALMGQGKREEAEEVKKQVAASGARIDELSAREKEVEEELLKNMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ + H EI E +D D A +++G F L G +A L A Sbjct: 121 DDSENVEIEKFGEPVVPDYEIPYHTEIMENFDGIDLDSARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VIAYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +I+ + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDQIVPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESP 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSLDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K HTLN + VA R LIA LEN LNADGSV IP L+PY Sbjct: 360 GDAQARRLRIRVNGKDGKKY-LAHTLNNTVVAPPRMLIAFLENNLNADGSVNIPEALQPY 418 Query: 417 MNNLAVIKKE 426 M + I+K+ Sbjct: 419 MGGMKKIEKK 428 >gi|87123701|ref|ZP_01079551.1| putative seryl-tRNA synthetase [Synechococcus sp. RS9917] gi|86168270|gb|EAQ69527.1| putative seryl-tRNA synthetase [Synechococcus sp. RS9917] Length = 425 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 181/430 (42%), Positives = 262/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R+NP+ + L +R LE + + ++ R L ++ ++A N ++G Sbjct: 1 MLDQRLVRENPDLIARELGRRGLEVDLTGLQLMAQQQRNLEEQRSSLQAEGNRIGKEVGV 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G V AL+ + + +K ++ +LE EE ++ L++ + +PN+P + P G+ Sbjct: 61 QIKAGADPKGEEVAALRQQGNAIKHKVAVLEDEEKQLQGRLREQLLTLPNLPSPDCPEGS 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N +R G P +EH+ I + LGL D +R+ +++ +RF L G A LERA Sbjct: 121 DETDNQEVRRWG-TPRRGDGLQEHWAIADQLGLFDTERSVRIAQSRFVTLFGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLHT GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LINFMLDLHT-SKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCADDDLWLTPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII + LPLR+ +P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 239 TSLHRDEIIAADQLPLRYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFAHPDQSE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H ++ + AE +L+ L+L YRV+ LCTGDLGFSA +TYDLEVWLAG YREISSCS C Sbjct: 299 EAHAQITADAESVLQALELPYRVLDLCTGDLGFSARRTYDLEVWLAGAGAYREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR + R K+ + HTLNGSG+A+GR + A+LEN DGSV +P LRPY Sbjct: 359 GDFQARRSSIR--TKEGKTTRLLHTLNGSGLAIGRTMAALLENGQQEDGSVLLPEALRPY 416 Query: 417 MNNLAVIKKE 426 ++ E Sbjct: 417 F-GSDRLQPE 425 >gi|172035843|ref|YP_001802344.1| seryl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171697297|gb|ACB50278.1| seryl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 429 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 188/422 (44%), Positives = 258/422 (61%), Gaps = 7/422 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 LD++ IR+ P+ + L +R E IL D R L +++AR N IG Sbjct: 4 LDLKQIRETPDTIQALLNRRSASDEYDLTPILERDRTTRELESVRTELQARSNEIGKLIG 63 Query: 60 QAIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 Q I G + LK E + +K +L LE +E ++ + ++ L+ +PN+P E PIG Sbjct: 64 QKIKSGVDPKGEEIKGLKEEGNRVKTKLSELEPQEKQLKAEIEALLLQLPNLPSESTPIG 123 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 EN+ IR G + H+EI E LG+++ +RA K++ +RF L G A LER Sbjct: 124 KDETENVEIRKWGDEFLPKIEGLPHWEIAERLGILEVERAVKIAQSRFIALIGAGAALER 183 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL FM+D GY EV P+L+ A+ GTGQ+PKFA++ F D WL PT+EV Sbjct: 184 ALINFMLDQQI-AAGYLEVMPPVLINSAALQGTGQLPKFAEESFNVPEDDLWLAPTAEVP 242 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLYS EI+E++ LP++ P FR EAGS G+DTRG++R HQF K ELV + E S Sbjct: 243 VTNLYSGEILEAEILPIKHCAFTPCFRREAGSYGKDTRGLIRLHQFNKVELVKLVHPETS 302 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 H++++ AE IL+ L L YRV+ LCTGDLGF A K YDLEVW+ N YREISSCS Sbjct: 303 EAAHQQLVEDAEAILQALKLPYRVLELCTGDLGFGATKCYDLEVWMPSSNSYREISSCSN 362 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +FQ+RR N R+++ K ++ HTLNGSG+A+GR + AILENY ADG+V IP VL+P Sbjct: 363 CWDFQARRANIRFKEKGKKGTQYVHTLNGSGLAIGRTMAAILENYQQADGTVKIPDVLQP 422 Query: 416 YM 417 Y+ Sbjct: 423 YL 424 >gi|296111415|ref|YP_003621797.1| seryl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] gi|295832947|gb|ADG40828.1| seryl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] Length = 436 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 192/434 (44%), Positives = 268/434 (61%), Gaps = 15/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R+N + L+ R + P+ +L+LDE R I+ +E ++A RN S +I Sbjct: 1 MLDIKYLRKNTDEAMRRLQDRGVAPEKLTELLTLDEARRDTIRTVESLKADRNVASDKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A N + ++ +L+ ++ E+ ++ L + +PN+ EVP+G Sbjct: 61 YAKR--NKEDASEAIAAMQMVSSKIKLLDSKQVELDEQVQDLAAHLPNLAASEVPVGPDE 118 Query: 120 NENILIRSVGKKPSAI---------HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + NI R + HF+IGEALG++DF+R K+SGARF G Sbjct: 119 SANIEQRVWEPAEYKNRPHALVESPKWLKAHFDIGEALGILDFERGAKVSGARFLYYVGD 178 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLI 229 A LERA+ FM+D H + GYTE+ P++V D AM+GTGQ PKF DD + + I Sbjct: 179 GARLERAVYNFMLDQH-HQEGYTEMITPIVVNDSAMFGTGQYPKFQDDAYRVEGLEQTYI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN Y+ E + + LP++FT L+PSFR EAGSAG+DTRG++R HQF K E+V Sbjct: 238 PTAEVPLTNYYAGETLPGQDLPIKFTALSPSFRKEAGSAGKDTRGLIRLHQFNKVEMVKF 297 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ E S+ E E+M AE IL++L L Y V+ L TGD+GFSA KTYD+EVW+ QN YRE Sbjct: 298 TKPEQSYDELEKMTDNAENILRQLGLPYHVIMLSTGDMGFSAAKTYDVEVWMPQQNTYRE 357 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISS S +FQ+RRM+ +RD + K L+ HTLNGSG+AVGR + AILENY N DG+VTI Sbjct: 358 ISSVSNTEDFQARRMHITFRDDSGK-LQLVHTLNGSGLAVGRTVAAILENYQNEDGTVTI 416 Query: 410 PTVLRPYMNNLAVI 423 P VLRPY+ + Sbjct: 417 PEVLRPYLGGQEKL 430 >gi|319953428|ref|YP_004164695.1| seryl-tRNA synthetase [Cellulophaga algicola DSM 14237] gi|319422088|gb|ADV49197.1| seryl-tRNA synthetase [Cellulophaga algicola DSM 14237] Length = 423 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 159/426 (37%), Positives = 234/426 (54%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + IR+N + + ALKKR+ + +L LDEK R ++++ A N S +I Sbjct: 1 MLQLNVIRENKDAIIEALKKRNSDAASLINSVLDLDEKRRATQTQLDNTLADSNKLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G +ALK ET+ LKE L +E + + + L+ + IPNVP + VP G S Sbjct: 61 GILYKSGKAPEANALKEETANLKETSKELSEELNTIATELQNALYLIPNVPHDSVPTGKS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N I G P + H+E+ + ++DF+ K++GA F V G A L+RAL Sbjct: 121 EEDNEEIFKEGAIPVLADGALPHWELAKKYDIIDFELGVKIAGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 + +D +T GY E+ P +V + + YGTGQ+P M+ D +LIPT+E+ +T Sbjct: 181 INYFLDKNT-AAGYNEIQVPHVVNEASGYGTGQLPDKEGQMYYMPADDLYLIPTAEIPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ I+ K P+ T P FR EAGS G RG+ R HQF K E+V + S+ Sbjct: 240 NVFRDVIVTEKDFPITHTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRVEHPSKSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + IL+ L L YR++ LC GDLGF++ T+D EV+ Q+ + EISS S Sbjct: 300 ALDGMVEHVKGILRELKLPYRILRLCAGDLGFTSALTFDFEVFSTAQDRWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +Q+ R+ R++D + KS + HTLNGS +A+ R L ILENY DG +TIP VL PY Sbjct: 360 TYQANRLKLRFKDEDGKS-QLAHTLNGSALALPRVLAGILENYQTPDG-ITIPEVLIPYC 417 Query: 418 NNLAVI 423 I Sbjct: 418 -GFDKI 422 >gi|10581491|gb|AAG20222.1| serine-tRNA synthetase [Halobacterium sp. NRC-1] Length = 474 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 175/444 (39%), Positives = 256/444 (57%), Gaps = 21/444 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML Q++R++PE + AL + ++ + IL +DE+ R L + +++R RN S++IG+ Sbjct: 15 MLSRQFVREHPEKVRDALDAKGVDADLDRILEVDEEWRELKARGDELRHDRNEVSSKIGE 74 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G+ + LK++L +E ++ + L++L+ +P VP E+ P+G S Sbjct: 75 LKQAGDEDAAQEAIERSQALKDELADVEARADDLEAELERLLLTLPMVPDEDAPVGDSEA 134 Query: 121 ENILIRSVGKKPSAI--HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN+ R G H+++GE L ++DF+R K+SG F G A LE AL Sbjct: 135 ENVERRREGFDDRRDLPESVVPHYDLGEELDILDFERGAKVSGGGFYFSKGAGARLEHAL 194 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLI 229 QFM+D+H E GY +V P+ V +M GTGQ PKF +D + D WL+ Sbjct: 195 VQFMLDVH-REQGYEDVFPPMPVSARSMEGTGQFPKFVEDAYRIGGENDADYDDDDLWLL 253 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV +TN+Y EI+ LP++ +P+FR EAG G +TRG++R HQF K ELV+ Sbjct: 254 PTAEVPVTNMYRDEILLDDDLPVKHQAYSPNFRREAGEHGTETRGIVRVHQFNKVELVNF 313 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ----- 344 R EDS +L AE +L+RLDL YRV+ +CTGD+GF+ K YD+EVW G Sbjct: 314 VRPEDSAERFHGLLDEAEAVLRRLDLPYRVLEMCTGDMGFTQAKKYDIEVWAPGDDMDGG 373 Query: 345 ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + E+SS S +FQ+RR + +YR +S + HTLNGSGVAV R L+AILE Y Sbjct: 374 PEMGGRWLEVSSVSNFKDFQARRADIQYRPERHESAEHLHTLNGSGVAVPRVLVAILEYY 433 Query: 401 LNADGSVTIPTVLRPYMNNLAVIK 424 N DG+VT+P L+PYMN I+ Sbjct: 434 QNDDGTVTVPEALQPYMNGQTRIE 457 >gi|160871597|ref|ZP_02061729.1| seryl-tRNA synthetase [Rickettsiella grylli] gi|159120396|gb|EDP45734.1| seryl-tRNA synthetase [Rickettsiella grylli] Length = 424 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 183/420 (43%), Positives = 262/420 (62%), Gaps = 6/420 (1%) Query: 1 MLDIQWIRQNP--EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD +++R + E + L R + + I L+ + + L + E ++ N ++ I Sbjct: 1 MLDPKYLRHDIQIEEIAKQLANRGYQLDTRLITRLEAQRKKLQSETESLQNTSNRSAKAI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G A ++G + L E + +K+Q + E + ++ L + IPN+ VPIG Sbjct: 61 GLAKSKG--ESITGLLEEVADIKKQREVCEGKLKDILEELSAIYLTIPNLAHASVPIGQD 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N R GK P ++H +GEA GLMDF A+K++G+RF VL G LA L+RAL Sbjct: 119 ESQNKTQRHWGKVPHFDFAVKDHVALGEANGLMDFASASKIAGSRFVVLYGRLARLQRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR--WLIPTSEVSL 236 QFM+D+H EH Y EV P + E++ GTGQ+P FA+D+F + +LIPT+EVS+ Sbjct: 179 IQFMLDVHIKEHAYQEVYVPYIANTESLMGTGQLPGFAEDLFNLKGEQGFYLIPTAEVSV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL I + LP ++ P FRSEAGS G+DTRGM+RQHQF K EL+ ++S+ Sbjct: 239 TNLARDTIFAATDLPKKYVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELIRFVEPKNSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE IL++L+L YRVV+LCTGDLGFS+ KTYDLEVWL QN YREISSCS Sbjct: 299 HALEELTQEAESILQKLELPYRVVALCTGDLGFSSAKTYDLEVWLPSQNTYREISSCSHF 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR+ +R+R+P + ++ HTLNGSG+AVGR L+A++ENY DG + IP VL+ Y Sbjct: 359 ESFQARRLAARWRNPETDKIELIHTLNGSGLAVGRALVALMENYQTKDGKIRIPEVLKNY 418 >gi|29830787|ref|NP_825421.1| seryl-tRNA synthetase [Streptomyces avermitilis MA-4680] gi|46577430|sp|Q82FK8|SYS1_STRAW RecName: Full=Seryl-tRNA synthetase 1; AltName: Full=Serine--tRNA ligase 1; Short=SerRS 1; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase 1 gi|29607900|dbj|BAC71956.1| putative seryl-tRNA synthetase [Streptomyces avermitilis MA-4680] Length = 425 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 145/429 (33%), Positives = 244/429 (56%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++R+ + + I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRSEQKALGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + LK + + E+HE K+L+ + N+ +VP+G Sbjct: 61 KA----SPEERAELLKKAEQLKADVKAADVEQHEADEEAKRLLLQLGNLVHPDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + ++H E+GEALG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVVLETHGTIRDFGAEGFEPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+ + P LVR AM GTG + + +++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFIPMLTPALVRPRAMEGTGFLGQASENVYHLEKDDYYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EI+++ LP+R+ +P FR EAG+ G+DTRG+ R HQF K E+ S ED+ Sbjct: 236 AAYHMDEILDADKLPMRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L ++V+ + +GDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 NEHKRLLEWEKQWLTGLELPFQVIDVASGDLGASATRKFDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR++ R RD K ++ TLNG+ AV R ++AILEN+ DGSV +P +LRPY Sbjct: 356 DSFQARRLSVRMRD--GKKVQPLATLNGTLCAVPRTIVAILENHQLPDGSVRVPEMLRPY 413 Query: 417 MNNLAVIKK 425 + +++ Sbjct: 414 LGGRELLEP 422 >gi|297200865|ref|ZP_06918262.1| seryl-tRNA synthetase [Streptomyces sviceus ATCC 29083] gi|197716361|gb|EDY60395.1| seryl-tRNA synthetase [Streptomyces sviceus ATCC 29083] Length = 425 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 150/429 (34%), Positives = 242/429 (56%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++R+ + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A L + LK + E +++ K+L + N+ +VP+G Sbjct: 61 KA----TPEERAELLQKAEQLKADVKAAEAAQNDADDETKRLALQLGNLVHPDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + ++H E+GEALG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVVLETHGTIRDFGAEGFEPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+T + P LVR AM GTG + + A++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFTPMLTPALVRPRAMEGTGFLGQAAENVYHLEKDDYYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EI+++ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S ED+ Sbjct: 236 AAYHMDEILDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L ++V+ + +GDLG SA + YD E W+ Q YRE++S S C Sbjct: 296 NEHKRLLDWEKQWLTGLELPFQVIDVASGDLGSSASRKYDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R RD K ++ TLNG+ AV R ++AILEN+ ADGSV +P VLRPY Sbjct: 356 DGFQARRLSVRMRD--GKKVQPLATLNGTLCAVPRTIVAILENHQLADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKK 425 + +++ Sbjct: 414 LGGRELLEP 422 >gi|239626544|ref|ZP_04669575.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516690|gb|EEQ56556.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 429 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 137/430 (31%), Positives = 223/430 (51%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NP+ + +K + E + +++LD +NR+ K+ +D+RA RN S + Sbjct: 1 MLDLKFVRENPDIVKQNIKNKFQEGKLALVDEVIALDAENRVTQKEADDLRASRNKLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ +A+G +++K + S +L LE +E E+ + K++ IPN+ VPIG Sbjct: 61 IGKLMAQGKKEEAESVKAQVSANSTRLAELEAKEGELSEKIMKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI E +D D A +++G F L G +A L + Sbjct: 121 DDSENVEVERFGEPAVPDFEIPYHTEIMERFEGIDLDAARRVAGNGFYYLMGDIARLHSS 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTITPEAQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESP 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++R+ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDRLWQNTVDLFRTLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + HTLN + VA R LIA LEN L ADGSV IP LRPY Sbjct: 360 GDAQARRLKIRVQGEDGSKY-LAHTLNNTVVAPPRMLIAFLENNLQADGSVKIPEALRPY 418 Query: 417 MNNLAVIKKE 426 M + V+ + Sbjct: 419 MGGMEVMVPK 428 >gi|197302255|ref|ZP_03167314.1| hypothetical protein RUMLAC_00982 [Ruminococcus lactaris ATCC 29176] gi|197298686|gb|EDY33227.1| hypothetical protein RUMLAC_00982 [Ruminococcus lactaris ATCC 29176] Length = 428 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 138/430 (32%), Positives = 222/430 (51%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NP+ + +K + + P + ++ LD++NR + +++E +RA +N S + Sbjct: 1 MLDIKFLRSNPDVVKQNIKNKFQDEKLPLVDEVIELDKRNREIKQEVEALRAEKNKASKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+ L +ALK + + ++ L +EE EV +KK + IPN+ VPIG Sbjct: 61 IGAMMAQKKLEEAEALKKKVAESNGRINDLSEEEKEVEEKIKKNMMIIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI E+ +D D A +++G F L G +A L A Sbjct: 121 DDSENVEVERFGEPVVPDFEIPYHTEIMESFNGIDLDAARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VIAYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + ++ LP T+ +P FR E G+ G + RG+ R HQF K E++ + EDS Sbjct: 240 IGKFIGTTLDKTELPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCEPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWYDKLWKNTVDLFRSMDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + F HTLN + VA R LIA LEN L ADGSV IP VL+PY Sbjct: 360 GDAQARRLGIRIKGEKGS--YFAHTLNNTVVAPPRMLIAFLENNLQADGSVKIPEVLQPY 417 Query: 417 MNNLAVIKKE 426 M I + Sbjct: 418 MGGNKEITPK 427 >gi|167759564|ref|ZP_02431691.1| hypothetical protein CLOSCI_01921 [Clostridium scindens ATCC 35704] gi|167662791|gb|EDS06921.1| hypothetical protein CLOSCI_01921 [Clostridium scindens ATCC 35704] Length = 428 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 140/430 (32%), Positives = 226/430 (52%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NP+ + +KK+ + P + +L LD++NR + +++E +RA RN S + Sbjct: 1 MLDIKFVRMNPDVVKENIKKKFQDEKLPLVDEVLELDKRNRDIKQEVEALRADRNKISKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + ++L L EE +V + +KK++ IPN+ VPIG Sbjct: 61 IGACMAQGKKDEAEELKKKVQENADRLESLSTEEKDVEAKIKKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 NEN+ I G+ H EI E+ +D + A +++G F L G +A L A Sbjct: 121 DDNENVEIEKFGEPVVPDFEIPYHTEIMESFSGIDLESAGRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VLSYARDFMI-GRGFTYCIPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + ++ LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTMLTEDQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDLFRSMDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + +SK F HTLN + A R LIA LEN L ADGSV IP VL+PY Sbjct: 360 GDAQARRLGIRVKGEDSK--YFAHTLNNTVAAPPRMLIAFLENNLQADGSVKIPEVLQPY 417 Query: 417 MNNLAVIKKE 426 M + + Sbjct: 418 MGGTTRLIPK 427 >gi|297193371|ref|ZP_06910769.1| seryl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC 25486] gi|197718310|gb|EDY62218.1| seryl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC 25486] Length = 425 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 150/429 (34%), Positives = 243/429 (56%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++R+ + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVGLVDALLSADERRRSSGLRFDELRSEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A L + LK + E E+++ ++L+ + N+ E+VP+G Sbjct: 61 KA----TPDERAELLKKAEQLKSDVKAAEAEQNDAEEETRRLLLQVGNLVHEDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + ++H E+GEALG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVVLETHGTIRDFGAEGFTPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+ + P LVR AM GTG + + A++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFIPMLTPALVRPRAMEGTGFLGQAAENVYHLEKDDYYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII++ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S ED+ Sbjct: 236 AAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L ++V+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHKRLLDWEKQWLTALELPFQVIDVATGDLGSSASRKFDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R R K ++ TLNG+ AV R ++AILEN+ ADGSV +P VLRPY Sbjct: 356 DGFQARRLSVRMR--EGKKVQPLATLNGTLCAVPRTIVAILENHQLADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKK 425 + +++ Sbjct: 414 LGGRELLEP 422 >gi|254393739|ref|ZP_05008859.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294813672|ref|ZP_06772315.1| Seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|326441924|ref|ZP_08216658.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197707346|gb|EDY53158.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294326271|gb|EFG07914.1| Seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 425 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 149/429 (34%), Positives = 247/429 (57%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + + +LS DE+ R + +++R+ + Q+G Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVELVDALLSADERRRSSGVRFDELRSEQ----KQLG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + + L LK ++ E ++E K+L+ + N+ E+VP+G Sbjct: 57 KLVPKASPEERAELLKRAEQLKSEVKAAEATQNEADEEAKRLLLRLGNIVHEDVPVGGED 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + ++H E+GEAL +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVVLETHGTIRDFAAEGFEPKDHLELGEALRAIDVERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+T + P LVR AM GTG + + A++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFTPMLTPTLVRPRAMEGTGFLGQAAENVYHLEKDDYYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII++ LPLR+ +P +R EAG+ G+DTRG+ R HQF K E+ S ED+ Sbjct: 236 AAYHMDEIIDADQLPLRYAGFSPCYRREAGTYGKDTRGIFRVHQFDKVEMFSYVMPEDAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L ++V+ + TGDLG SA + YD E W+ Q YRE++S S C Sbjct: 296 AEHKRLLEWEKQWLTSLELPFQVIDVATGDLGASASRKYDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR++ R R K ++ TLNG+ AV R ++A+LEN+ ADGSV +P VLRPY Sbjct: 356 DSFQARRLSVRMR--EGKKVQPLATLNGTLCAVPRTIVALLENHQLADGSVRVPPVLRPY 413 Query: 417 MNNLAVIKK 425 + +++ Sbjct: 414 LGGRELLEP 422 >gi|58040190|ref|YP_192154.1| seryl-tRNA synthetase [Gluconobacter oxydans 621H] gi|67461607|sp|Q5FQ48|SYS_GLUOX RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|58002604|gb|AAW61498.1| Seryl-tRNA synthetase [Gluconobacter oxydans 621H] Length = 420 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 209/423 (49%), Positives = 281/423 (66%), Gaps = 4/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ +R +P D AL +R L P + ++S DE R + +++ + R + + +IG Sbjct: 1 MHDLKALRADPAAFDAALARRGLSPVGQQLVSDDEGRRAALAALQEAQGARKALAKEIGL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + ++ + L++Q+ LE+ + + + + ++ +PN VP G + Sbjct: 61 LKRQKLDT--AEIEAKAVALRDQIAGLEERANTIQTRIDDVLKSLPNCLDASVPDGKGED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+++ G+K +++HFE+GEALGLMDF A KLSG RF VL G LA LERALGQ Sbjct: 119 ENVVVHVRGEKREFAFEAKQHFELGEALGLMDFPTAAKLSGTRFVVLRGALARLERALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D HT+E GY+E S PLLV D+AMYGT ++PKFA+D F T DGRWLIPT+EV LT Sbjct: 179 FMLDTHTTEFGYSETSVPLLVNDDAMYGTDKLPKFAEDSFRTEDGRWLIPTAEVPLTASV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EI+ + +LP+R T L+ FRSEAGSAGRD RGMLRQHQF KCELVS+ + EDS EHE Sbjct: 239 MGEILPADALPIRMTALSQCFRSEAGSAGRDVRGMLRQHQFTKCELVSVVKPEDSDAEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM AE +L+RL + +R + LC GD GF A KT+DLE WL GQ +REISSCS +FQ Sbjct: 299 RMTQAAETVLERLGITFRRMLLCAGDTGFGAAKTFDLEAWLPGQKAWREISSCSNTRDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRMN+RYR N F +TLNGSG+AVGR +IA++E Y N DGS+ IP VLRPYM L Sbjct: 359 ARRMNARYRAENG--PAFVNTLNGSGLAVGRTMIAVMETYQNEDGSIDIPEVLRPYMGGL 416 Query: 421 AVI 423 I Sbjct: 417 NRI 419 >gi|152993537|ref|YP_001359258.1| seryl-tRNA synthetase [Sulfurovum sp. NBC37-1] gi|166223301|sp|A6QBP2|SYS_SULNB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|151425398|dbj|BAF72901.1| seryl-tRNA synthetase [Sulfurovum sp. NBC37-1] Length = 414 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 253/419 (60%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D+++++ N + + L+K+ ++ E++ +L + + K+E +A +NS S G Sbjct: 1 MIDLKYLQNNFNEVSMKLQKKGVDAASLEHLQTLFKTLKEANAKLEAAKAEQNSMSKLFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q EG + LK + KE + L++ E +L + IPN+P + VP G Sbjct: 61 QYKREGK--DITELKAKVDANKEAMVPLQEAAREAEEALYAVALAIPNLPDDSVPEGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ + V + S +EH+++ E G +DF+R KL+ +RFSVL G A LERAL Sbjct: 119 EDNVELIKVLEPRSFDFEPKEHWDLAEKNGWIDFERGVKLAKSRFSVLRGDAARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 F +D + E G+ E P + + GTGQ+PKF DD+F + +LIPT+EV LTN Sbjct: 179 NFFLDTN-RERGFEEFCVPFMNNAAMLQGTGQLPKFEDDLFKIEDEDLYLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y EI+ LP+ T P FR EAGSAGRDTRGM+RQHQF K E+V+I ++S Sbjct: 238 MYHDEILAEIDLPVLMTGYTPCFRKEAGSAGRDTRGMIRQHQFDKVEMVAIAHPDNSDEV 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M+ A +IL L L +RVV LC GDLGFSA KT DLEVWL GQN YREISS S + Sbjct: 298 FDMMVQNASDILTALGLPHRVVELCGGDLGFSAAKTIDLEVWLPGQNKYREISSISNTRD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR R++D K + HTLNGS +AVGR LIAI+ENY N DG++ IP VL+ YM Sbjct: 358 FQARRAKIRFKD--GKKNRLVHTLNGSALAVGRTLIAIMENYQNEDGTIEIPEVLKKYM 414 >gi|302672302|ref|YP_003832262.1| seryl-tRNA synthetase SerS [Butyrivibrio proteoclasticus B316] gi|302396775|gb|ADL35680.1| seryl-tRNA synthetase SerS [Butyrivibrio proteoclasticus B316] Length = 431 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 137/430 (31%), Positives = 226/430 (52%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+++R+NP+ + +KK+ + P + ++ LDE+ R ++ ++IRA +N S + Sbjct: 1 MIDIKFLRENPDVVRENIKKKFQDEKLPLVDEVIKLDEQRRTNQQEADEIRAHKNKISKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G ALK+E + ++L LE+ + ++ + + IP + E VPIG Sbjct: 61 IGGLMAQGKKDEAMALKDEVAKEAKRLEELEENQKKLDEEVTNKMMIIPQIIDESVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N+ I G+ H +I E+ +D D A +++G F L G +A L A Sbjct: 121 DDSQNVEIEKFGEPVVPDFEIPYHTDIMESFDGIDLDAARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++ + G P+ M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCVPPFMIHGNVVAGVMSFPEMEAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +II + +P T+ +P FR E G+ G + RG+ R HQF K E+V I + E+S Sbjct: 240 IGKFIDQIIPEEEMPKALTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVICKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + +D+ R + C+GDL CK+ D+E W Q Y E+ SCS Sbjct: 300 AWYDKLWKNTVDLFRSMDIPVRTLECCSGDLADLKCKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + HTLN + VA R LIA LEN L ADGSV IP VLRPY Sbjct: 360 GDAQARRLKIRIKGKDGN--YLAHTLNNTVVAPPRMLIAFLENNLQADGSVRIPEVLRPY 417 Query: 417 MNNLAVIKKE 426 M V+ Sbjct: 418 MGGKEVLVPT 427 >gi|78185357|ref|YP_377792.1| seryl-tRNA synthetase [Synechococcus sp. CC9902] gi|123580767|sp|Q3AV47|SYS_SYNS9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|78169651|gb|ABB26748.1| seryl-tRNA synthetase [Synechococcus sp. CC9902] Length = 425 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 179/430 (41%), Positives = 259/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R NPE + LK+R + + + R L ++ ++A N ++G Sbjct: 1 MIDQRLVRDNPEVIAQQLKRRGKSIDLTGLQLIARQQRGLEEERSTLQADGNRVGKEVGL 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G N V AL+ + + +K+++ + E+EE + S L+ + +PN+P P G Sbjct: 61 KIKGGADPNGEEVAALRQQGNAIKQKVAVFEEEEKALSSQLRDQLLSLPNLPSPLCPDGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S ++N+ +R G P EH++I + L L D +R+ +++ +RF L G A LERA Sbjct: 121 SEDDNVEVRRWG-TPRIEEGLEEHWQIAQRLNLFDTERSVRIAQSRFVTLMGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLHT GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LINFMLDLHT-SKGYREVMPPVLVNTASLTGSGQLPKFAEESFRCADDDLWLTPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII + LPLR++ +P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 239 TSLHRDEIIPADQLPLRYSAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVHPDQSE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++ + AE +L+ LDL YRV+ LCTGDLGFSA +TYDLEVWL G +REISSCS C Sbjct: 299 EAHQQITADAEAVLQALDLPYRVLDLCTGDLGFSAQRTYDLEVWLPGAGAFREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR R + K K HTLNGSG+AVGR + A+LE DGS+ +P L PY Sbjct: 359 GDFQARRSAIR--TKDGKQTKLVHTLNGSGLAVGRTMAALLETGQQPDGSILLPKPLVPY 416 Query: 417 MNNLAVIKKE 426 + ++ E Sbjct: 417 V-GFERLQPE 425 >gi|33866426|ref|NP_897985.1| seryl-tRNA synthetase [Synechococcus sp. WH 8102] gi|46577187|sp|Q7U518|SYS_SYNPX RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|33633204|emb|CAE08409.1| putative seryl-tRNA synthetase [Synechococcus sp. WH 8102] Length = 425 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 180/430 (41%), Positives = 258/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R+NP+ + L +R + + ++ R L ++ ++A N ++GQ Sbjct: 1 MLDQRLVRENPDAIATELGRRGKAVDLTRLQVIAQQQRKLEEERSGLQAEGNRIGKEVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G V L+ + + +K+++ +LE+EE + + LK+ + PN+P + P G Sbjct: 61 KIKGGADPKGEEVAELRQQGNAIKQKVAVLEEEEKHLFTQLKEQLLTYPNLPSPDCPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N+ +R G P EH++I E L L D +R+ +++ +RF L G A LERA Sbjct: 121 DETDNVELRRWG-SPRQEEGLEEHWQIAERLHLFDTERSVRIAQSRFVTLMGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLHT GY EV P+LV ++ G+GQ+PKFADD F C+ D WL PT+EV + Sbjct: 180 LINFMLDLHT-SKGYREVMPPVLVNSASLTGSGQLPKFADDCFRCSEDDLWLTPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII + LPLR+ +P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 239 TSLHRDEIIPADQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFAHPDHSA 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H ++ + AE +L+ L+L YRV+ LCT D+GFSA +TYDLEVWL G YREISSCS C Sbjct: 299 EAHAQITADAEAVLQALELPYRVLDLCTADIGFSAQRTYDLEVWLPGAEAYREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR R KS K HTLNGSG+AVGR + A+LE +DGSV +P L PY Sbjct: 359 GDFQARRSAIR--TKEGKSTKLVHTLNGSGLAVGRTMAAVLETGQQSDGSVLLPKALVPY 416 Query: 417 MNNLAVIKKE 426 + ++ E Sbjct: 417 V-GDERLQPE 425 >gi|116072764|ref|ZP_01470030.1| seryl-tRNA synthetase [Synechococcus sp. BL107] gi|116064651|gb|EAU70411.1| seryl-tRNA synthetase [Synechococcus sp. BL107] Length = 425 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 176/430 (40%), Positives = 257/430 (59%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R NPE + LK+R + + + R L ++ ++A N ++G Sbjct: 1 MIDQRLVRDNPEVIAQQLKRRGKSIDLTGLQLIARQQRGLEEERSTLQADGNRIGKEVGL 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G V AL+ + + +K+++ + E+EE + L+ + +PN+P P G Sbjct: 61 KIKGGADPKGDEVAALRQQGNAIKQKVAVFEEEEKTLSGQLRDQLLSLPNLPSPLCPDGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++N+ +R G P EH++I + L L D +R+ +++ +RF L G A LERA Sbjct: 121 NEDDNVEVRRWG-TPRIEEGLEEHWQIAQRLNLFDTERSVRIAQSRFVTLIGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLHT GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LINFMLDLHT-SKGYREVMPPVLVNTASLTGSGQLPKFAEESFRCAEDDLWLTPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII + LPLR++ +P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 239 TSLHRDEIIPADQLPLRYSAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVHPDQSE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++ + AE +L+ LDL YRV+ LCTGDLGFSA +TYDLEVWL G +REISSCS C Sbjct: 299 EAHQQITADAEAVLQALDLPYRVLDLCTGDLGFSAQRTYDLEVWLPGAGAFREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR R + K K HTLNGSG+AVGR + A+LE DGS+ +P L PY Sbjct: 359 GDFQARRSAIR--TKDGKQTKLVHTLNGSGLAVGRTMAALLETGQQPDGSILLPKPLVPY 416 Query: 417 MNNLAVIKKE 426 + ++ E Sbjct: 417 V-GFERLQPE 425 >gi|116073516|ref|ZP_01470778.1| seryl-tRNA synthetase [Synechococcus sp. RS9916] gi|116068821|gb|EAU74573.1| seryl-tRNA synthetase [Synechococcus sp. RS9916] Length = 425 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 182/430 (42%), Positives = 263/430 (61%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NP+ + L +R + + + ++ R L +K ++A N ++GQ Sbjct: 1 MLDQRLVRDNPDLIARELGRRGMNVDLTGLQLIAQQQRNLEEKRSSLQADGNRIGKEVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G V L+ + + +K+Q+ +LE+EE E+ + L++ + PN+P + P G Sbjct: 61 KIKGGADPKGEEVADLRRQGNQIKQQVAVLEEEEKELSAKLREQLLSFPNLPSPQCPEGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S ++N +R G P EH++I + LGL+D +R+ ++S +RF L G A LERA Sbjct: 121 SEDDNQEVRRWG-TPRQDEGLEEHWQIADRLGLLDTERSVRISQSRFVTLMGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLH GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LINFMLDLH-CSKGYKEVLPPVLVNSASLQGSGQLPKFAEESFRCAEDDLWLTPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII + LP+R+ +P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 239 TSLHRDEIIPADQLPVRYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVHPDHSE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H ++ + AE +L+ L+L YRV+ LCTGD+GFSA +TYDLEVWLAG YREISSCS C Sbjct: 299 KAHAQITADAEAVLQALELPYRVLDLCTGDIGFSAARTYDLEVWLAGAGAYREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR + R KS + HTLNGSG+A+GR + A+LEN ADGSV +P L PY Sbjct: 359 GDFQARRSSIR--TKEGKSTRLVHTLNGSGLAIGRTMAALLENGQQADGSVLLPKALVPY 416 Query: 417 MNNLAVIKKE 426 ++ E Sbjct: 417 F-GRERLQPE 425 >gi|87303148|ref|ZP_01085946.1| seryl-tRNA synthetase [Synechococcus sp. WH 5701] gi|87282315|gb|EAQ74275.1| seryl-tRNA synthetase [Synechococcus sp. WH 5701] Length = 430 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 180/433 (41%), Positives = 258/433 (59%), Gaps = 11/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NPE + L +R + + + + R L ++ D++A N Q+G+ Sbjct: 1 MLDQRLLRDNPELIVEQLGRRGMTLDLTALQLIARQERDLEQQRSDLQAEGNRIGRQVGE 60 Query: 61 AIAEGN---LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G V AL++ +T+K+Q+ +LE+EE + + L++ + PN+P P G Sbjct: 61 LIRGGEAPHSPEVQALRDRGNTIKQQVAVLEEEEKSLETRLREQLLAFPNLPSPHCPDGA 120 Query: 118 SANENILIRSV---GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 EN+ R + EH++I E LGL+D +R+ +++ +RF L G A L Sbjct: 121 GEAENVERRRWGTPRMPVAGEPSLEEHWQIAERLGLIDSERSVRIAQSRFVTLIGQGARL 180 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSE 233 ERAL FM+D H GY E+ P+LV ++ +GQ+PKFA++ F C D WL PT+E Sbjct: 181 ERALISFMLDQHA-SRGYREMLPPILVNSASLTASGQLPKFAEESFSCADDDLWLTPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LT+ + EI+ ++ LPL++ P FR EAGS GRDTRG++R HQF K EL + Sbjct: 240 VPLTSFHRDEILAAEQLPLKYAAYTPCFRREAGSYGRDTRGLIRLHQFNKVELYWFCHPD 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S H ++ + AE IL+ L+L YRV+ LC GDLGFSA +T+DLEVWL G YREISSC Sbjct: 300 ESEAAHAQLTADAEAILQSLELPYRVLDLCCGDLGFSAARTFDLEVWLPGAGAYREISSC 359 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 STCG FQ+RR + R++D K + HTLNGSG+AVGR + A+LE ADGSV +P VL Sbjct: 360 STCGEFQARRASIRFKD--GKKTRLLHTLNGSGLAVGRTMAALLETGQQADGSVRLPEVL 417 Query: 414 RPYMNNLAVIKKE 426 PYM + E Sbjct: 418 VPYM-GCDRLVPE 429 >gi|291543437|emb|CBL16546.1| seryl-tRNA synthetase [Ruminococcus sp. 18P13] Length = 426 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 141/428 (32%), Positives = 221/428 (51%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ IR NPE + +KK+ + P + ++ LD++ R K + +R +R + S Sbjct: 1 MIDIKLIRTNPELVKENIKKKFQDEKLPLVDEVVELDKQYRETKVKSDALRNQRKTISKA 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G +A K E + L ++L E E+++ + ++K++ IPN+ + VPIG Sbjct: 61 IGGLMAKGQKEEAEARKAEVAELAKELSESEAMENDLEARIRKIMLVIPNIIDDTVPIGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G H +I E L +D D A K SG F L G +A L A Sbjct: 121 DDSENVEVERFGDPFVPEFEVPYHVDIMEKLHGIDIDSARKTSGNGFYYLCGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYFIPPYMIRSDVVTGVMSFAEMEGMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I+ +SLP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGRFIDTILPEESLPQTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 AWFVKLYQNTVDFFRSLDIPVRTLECCSGDLADLKVKSIDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + + HTLN + VA R LIA LEN LNADGSV IP LR Y Sbjct: 360 GDAQARRLGIRVKGADGEKY-LAHTLNNTVVAPPRMLIAFLENNLNADGSVRIPEPLRMY 418 Query: 417 MNNLAVIK 424 M VI+ Sbjct: 419 MGGKDVIR 426 >gi|255283799|ref|ZP_05348354.1| serine--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255265682|gb|EET58887.1| serine--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 429 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 136/431 (31%), Positives = 224/431 (51%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + ++ + + P + +++LD++NR + ++E +RA RN S Q Sbjct: 1 MLDIKFLRENPEIVKQNIRNKFQDQKLPMVDEVIALDKRNREIKNEVEALRANRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + + Q+ L +EE EV ++++++ IPN+ VPIG Sbjct: 61 IGALMGQGKREKAEEIKKQVAAQAGQVEALSQEEKEVEENIRRIMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H EI E +D D A +++G F L G +A + A Sbjct: 121 DDSENVEIEKFGEPVVPDFEIPYHTEIMERFDGIDLDAAREVAGNGFYYLMGDIARIHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSKVVTGVMSFAEMESMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDSLTPEAELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + K HTLN + VA R LIA LEN LN DGSV IP L+ Y Sbjct: 360 GDAQARRLGIRVKGEDGKKY-LAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPKALQMY 418 Query: 417 MNNLAVIKKEH 427 M + I +H Sbjct: 419 MGGIEKIVPKH 429 >gi|329938706|ref|ZP_08288102.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045] gi|329302197|gb|EGG46089.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045] Length = 425 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 151/429 (35%), Positives = 246/429 (57%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++R+ + S I Sbjct: 1 MIDLRQLREDPDRVRASQRARGEDVGLVDALLSADERRRSSGLRFDELRSEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + LK + + E+HE ++L+ + N+ +VP+G Sbjct: 61 KA----SPEEKAELLRKAEQLKSDVKAADAEQHEAEDETRRLLLQLGNLVHPDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + +V + ++H E+G+ALG MD +RA K+SG+RF LTG A LE A Sbjct: 117 DFVVLETHGTVRDFGAEGFEPKDHLELGQALGAMDVERAAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+T + P LVR +AM GTG + + A++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFTPMLTPALVRPQAMEGTGFLGQAAENVYHLEKDDLYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII+++ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ + ++ Sbjct: 236 AAYHMDEIIDAEKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFTFVDPSEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L ++ L L+L ++V+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 NEHRRLLDWEKQWLTSLELPFQVIDVATGDLGASASRKFDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R RD K ++ TLNG+ AV R ++A+LEN+ ADGSV +P VLRPY Sbjct: 356 DGFQARRLSVRMRD--GKKVQPLSTLNGTLCAVPRTIVALLENHQLADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|302386494|ref|YP_003822316.1| seryl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302197122|gb|ADL04693.1| seryl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 429 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 134/430 (31%), Positives = 222/430 (51%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + +K + + + ++ LDE+NR ++ + +RA RN S Q Sbjct: 1 MLDLKFVRENPEIVKENIKNKFQDNKLSLVDEVIELDEQNRKTKQEGDALRAERNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + + + L LE++E ++ +KK++ IPN+ VPIG Sbjct: 61 IGALMGQGKKEEAEGMKKQVTDASQHLAQLEEKERDLEERIKKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H +I E+ +D D A K++G F L G +A L + Sbjct: 121 DDSENVEVERYGEPVVPEFDIPYHTDIMESFDGIDLDSARKVAGNGFYYLMGDIARLHSS 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSEVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I+ LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTILPEGKLPQTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEDSM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + F HTLN + VA R LIA LEN L ADG+V IP L+PY Sbjct: 360 GDAQARRLKIRVAGDDGRKY-FAHTLNNTVVAPPRMLIAFLENNLQADGTVRIPDALQPY 418 Query: 417 MNNLAVIKKE 426 M + + Sbjct: 419 MGGTKALIPK 428 >gi|189485027|ref|YP_001955968.1| seryl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|238065109|sp|B1GZ25|SYS_UNCTG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|170286986|dbj|BAG13507.1| seryl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 423 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 182/426 (42%), Positives = 262/426 (61%), Gaps = 4/426 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+N + + A+ R+L+ + +L+ D + + +I KIE +R +RN S +IG+ Sbjct: 1 MLDIKVIRENVKEVKQAMLNRNLDISFDQLLNWDSERKTIIGKIEQLRLKRNKESEEIGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + L E + +++ + EK+ + ++ + IPN+P + VP+G Sbjct: 61 LKKESKEPPAE-LLAEINKVRDIIQEQEKQLLTIEKHIEDFLLRIPNIPDKSVPVGKDEK 119 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N +IR VGK + H+EIGE LG++DF A+K+SG F+VL + LERA+ Sbjct: 120 DNKIIRFVGKPEKFSFKPKYHWEIGEKLGIIDFAAASKISGPHFAVLKNEGSALERAIIS 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 F +D H E GY E++ P LV +M GTGQ+P +D F C D +LIPT+EV +TN+ Sbjct: 180 FFLDKH-KEKGYKEITTPYLVNRASMTGTGQLPNLEEDSFKCAIDDLYLIPTAEVPVTNI 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y +++E +LP ++ + + FR E+GS G+DT+G++R HQF K ELV + E S E Sbjct: 239 YRDDVLEESALPQKYVSYSACFRRESGSYGKDTKGLIRNHQFDKVELVKFAKPETSSEEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E ++ A +L+ L L YRVV L TGD+GFS+ KTYDLEVW AG +YREISSCS +F Sbjct: 299 ESLVLDAGNVLELLGLPYRVVLLSTGDIGFSSSKTYDLEVWFAGYGIYREISSCSNLKDF 358 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RRMN + + +K + HTLNGSGVAVGR AILENY DGSV IP LR Y Sbjct: 359 QARRMNIKVKYSQNKKRELLHTLNGSGVAVGRTFAAILENYQQEDGSVVIPNSLREYT-G 417 Query: 420 LAVIKK 425 +IK Sbjct: 418 FDIIKP 423 >gi|182414546|ref|YP_001819612.1| seryl-tRNA synthetase [Opitutus terrae PB90-1] gi|177841760|gb|ACB76012.1| seryl-tRNA synthetase [Opitutus terrae PB90-1] Length = 423 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 150/424 (35%), Positives = 231/424 (54%), Gaps = 5/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R++P+ + A+ K+HL+ + +L+LD R ++++E +R R+ + + + Sbjct: 1 MLDAKLLRESPDLVRAAIAKKHLDVDVDAVLALDAAWRTQLQEVETLRGRQKAANTAMAA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E + +Q+ + + + + ++ + +PN+P VP G + Sbjct: 61 LPK--GSPEFQAKVAEMKAVSQQVKEQDAKLKDAEGAFRQAMLSLPNLPHATVPEGRTPQ 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN++ G + H+EI L DF R K++GA F G A + RAL Sbjct: 119 ENVVFSLHGDHEKPHPSAVPHWEIPGFERLFDFARGAKVTGAGFPFYVGDGARMVRALLH 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 F ++ + GY EV+ P+ V + TGQ+P M+ T D + +PT+EV LTN Sbjct: 179 FFLEENA-RAGYVEVNPPIFVNAASATATGQLPDKEGQMYETTPDHLYAVPTAEVPLTNF 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI++ +LP+ P FR EAGS G+D RG+ R HQF K EL+ S+ E Sbjct: 238 FRDEIVDEAALPIYRCAYTPCFRREAGSYGKDVRGLNRLHQFDKVELLKWVHPSTSYEEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++ AE +L++L+L YRV+ +C GDLGF+ K YDLEVW AGQ + E+SSCS F Sbjct: 298 DKLRGDAEALLQKLNLPYRVLLMCGGDLGFAQAKKYDLEVWAAGQKRWLEVSSCSNFEAF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R+R + + HTLNGSG+AV R L A+LEN L ADG V IP VL+PY Sbjct: 358 QARRAQIRFRSKETGKPELVHTLNGSGLAVPRVLAALLENNLQADGRVHIPEVLQPYF-G 416 Query: 420 LAVI 423 + Sbjct: 417 KEFL 420 >gi|145219987|ref|YP_001130696.1| seryl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265] gi|189083579|sp|A4SFD5|SYS_PROVI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|145206151|gb|ABP37194.1| seryl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265] Length = 430 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 159/430 (36%), Positives = 253/430 (58%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R +P+ + L R EP+ +L D + R L+++ +++++ RN S + Sbjct: 1 MLDITLLRDSPDEIVTMLHNRQQPEDEPKLRQLLEEDAERRKLVQESDELKSLRNRKSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI-G 116 I + G+ S DAL E ++ + ++ + +S++ ++ +PN VP+ Sbjct: 61 IAEIKKSGSGS-ADALILEMQSVGTAIAEMDSRLTALETSMEDILLALPNRLHPSVPVGR 119 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++ + V + H E+G++LG++DF+R K+SGA F V G A LER Sbjct: 120 SAEENEVFGEPVSFTHPLDFSLKNHLELGKSLGILDFERGAKVSGAGFPVYVGKGARLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVS 235 AL FM+D HT +HGY EV P +V E++ GTGQ PKFA +++ + +LIPT+EV Sbjct: 180 ALINFMLDSHTEKHGYKEVFPPFMVNRESLRGTGQWPKFAGEVYHAPEDELYLIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNL+ E++E++SLP+ + + FR EAGS G++TRG LR HQF K E+V T+ EDS Sbjct: 240 VTNLHRGELLETESLPISYAAYSACFRREAGSYGKETRGFLRVHQFNKVEMVKFTKPEDS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E + AE IL+ L++ YRV+ LC+GD+ +A K YD+EVW + Y E SSCS Sbjct: 300 YQALEDIRGHAEAILRALEIPYRVLLLCSGDISANAAKCYDIEVWSPAEEKYLEASSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RR N R+R +F HTLNGSG+A R +++++E+Y +G + +P VL+P Sbjct: 360 FEDYQARRANIRFRRDGKSKPEFVHTLNGSGLATSRLMVSLMEHYQTPEGGILVPEVLKP 419 Query: 416 YMNNLAVIKK 425 Y + I Sbjct: 420 YT-GFSEITP 428 >gi|213965358|ref|ZP_03393554.1| seryl-tRNA synthetase [Corynebacterium amycolatum SK46] gi|213951974|gb|EEB63360.1| seryl-tRNA synthetase [Corynebacterium amycolatum SK46] Length = 423 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 148/427 (34%), Positives = 246/427 (57%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NPE + + R +P + +L D K R +I + +R+ + +IG Sbjct: 1 MIDLKFLRENPEVARESQRTRGEDPALVDQLLEADAKRREVIASTDALRSEQKGFGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E ++++ K + +K ++ E EV + + + P Sbjct: 61 QASKEERPAMLEKAKELSDAVKAAEAEQKEAEAEVERLQYLIGNIVTGAP------AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +++ +G+ P ++H ++GE+LGL+D +R K+SG+RF LTG+ A L+ A+ Sbjct: 115 DDFVVLEEIGEIPQFDFEPKDHLDLGESLGLIDMERGVKVSGSRFYFLTGYGAMLQLAMM 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 ++G+ + P+LVR E M GTG + +D+++ D +L+ TSEV+L Sbjct: 175 NLAAQKAI-QNGFQLMVPPVLVRPETMAGTGFLGAHSDEIYYLQEDDLYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S+EII+ P R+ + FR EAGS G+DTRG+LR HQF K E+ S E + E Sbjct: 234 YHSNEIIDLSEGPRRYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFSYCPPEQAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+++L+ E+L +++ YR++ + GDLG SA + +D E W+ QN YRE++S S C Sbjct: 294 HQKLLNMEREMLAAVEVPYRIIDVAGGDLGASAARKFDTEAWVPTQNTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD + KS ++ TLNG+ +A R L+AILEN+ ADGSV IP LRP+M Sbjct: 354 FQARRLKTRYRDADGKS-QYCATLNGT-LATTRWLVAILENHQQADGSVVIPEALRPFMM 411 Query: 419 NLAVIKK 425 V++ Sbjct: 412 GKEVLEP 418 >gi|315498366|ref|YP_004087170.1| seryl-tRNA synthetase [Asticcacaulis excentricus CB 48] gi|315416378|gb|ADU13019.1| seryl-tRNA synthetase [Asticcacaulis excentricus CB 48] Length = 468 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 211/467 (45%), Positives = 282/467 (60%), Gaps = 44/467 (9%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M DI+ +R+ PE R E + +L+LD+ R E +A+ S + Sbjct: 1 MHDIKALRETPEAYVRGWSSRGRESAQADVDALLTLDKDLRAAKTTFETNQAQLKKLSGE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+A A+ + + L E LK + + ++ E + L+ L++ +PN+P E+VP+G Sbjct: 61 IGKAKAQKDEARAAELMTEVEGLKGAIAVAQETERQTEEDLRTLLASLPNIPFEDVPLGE 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGL-----MDFDRATKLSGARFSVLTGHLA 172 N+ IR G L+++H ++GEAL MDF+ A ++SG+RF VL G LA Sbjct: 121 DEAGNVEIRRHGAPNILSFLAKDHADLGEALKGPTGPLMDFEAAARMSGSRFVVLKGQLA 180 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM------------- 219 LERA+GQ+M+D T+EHGYTEV+ P+LVR+ A++GTGQ+PKF +D+ Sbjct: 181 RLERAIGQWMLDTQTTEHGYTEVNPPVLVRENALFGTGQLPKFEEDLFKAGLTFSRERLA 240 Query: 220 -----------------------FCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 + R+LIPT+EVSLTNL I + LPLR T Sbjct: 241 GQAREAGIELKSLDEQTYELIIAQMGENARYLIPTAEVSLTNLVREAITAEEELPLRLTA 300 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 L FR+EAGSAGRDT+GM+RQHQF K ELVSIT E S EHERM CAE ILK+LDL Sbjct: 301 LTNCFRAEAGSAGRDTKGMIRQHQFQKVELVSITTPEQSAAEHERMTECAEAILKKLDLS 360 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSL 376 +R + LCTGD+GF A KTYDLEVWL QN YREISSCS CG+FQ+RRM++R R K Sbjct: 361 FRTMLLCTGDMGFGARKTYDLEVWLPSQNTYREISSCSNCGDFQARRMDARTRKAGEKGT 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 +F HTLNGSG+AVGR L+AI+ENY + G + IP+VL+PYM L I Sbjct: 421 RFLHTLNGSGLAVGRTLVAIMENYQDEGGRIAIPSVLQPYMGGLTHI 467 >gi|290959073|ref|YP_003490255.1| serine-tRNA ligase [Streptomyces scabiei 87.22] gi|260648599|emb|CBG71710.1| serine-tRNA ligase [Streptomyces scabiei 87.22] Length = 425 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 154/429 (35%), Positives = 238/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++RA + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A AE L LK + + E + ++L+ + N+ +VP+G Sbjct: 61 KASAEEKAE----LLKRAEQLKADVKAADAERDAADTETQELLLQLGNLVHPDVPVGGEE 116 Query: 120 NENILIRS--VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + L + + ++H E+G LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVTLETHGEIRDFTAEGFAPKDHLELGTILGAIDTERGAKVSGSRFYFLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I + G+T + P LVR ++M GTG + + A D++ D +L+ TSEV+L Sbjct: 177 LVNAAIAQ-ATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLDRDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII++ LPLR+ +P FR EAGS G+DTRG+ R HQF K E+ S EDS Sbjct: 236 AAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQ 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L +RV+ + + DLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHQRLLDWEKQWLTSLELPFRVIDVASADLGSSASRKFDCEAWIPTQGKYRELTSTSDC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQSRR+ R RD K +K TLNG+ AV R ++AILEN+ ADGSV +P VLRPY Sbjct: 356 TEFQSRRLQIRVRD--GKQVKPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|78188671|ref|YP_379009.1| seryl-tRNA synthetase [Chlorobium chlorochromatii CaD3] gi|123580121|sp|Q3ASQ9|SYS_CHLCH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|78170870|gb|ABB27966.1| seryl-tRNA synthetase [Chlorobium chlorochromatii CaD3] Length = 426 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 169/427 (39%), Positives = 258/427 (60%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +IRQNP+ + L+ R L EP+ + +L D + + L+++ ++ +A RN S + Sbjct: 1 MLDIAYIRQNPDEVAAMLRHRQLASEEPKLQQLLECDRQRKELVQRSDEQKALRNKVSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI-G 116 + + +G S D L ++ + + + ++ E+ + ++ L+ +PN VPI Sbjct: 61 VAEIKKKGVGSP-DELISQMKAVSDAITAMDSRLSELEAEMENLLLALPNKLHPSVPIGR 119 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++ + + V + S + H E+G+AL ++DF+R K+SGA F V G A LER Sbjct: 120 SAEDNMVFGEPVHFEHSLNFPLKNHLELGKALRILDFERGAKVSGAGFPVYVGKGARLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVS 235 AL FM+D+HT +HGYTEV P LV E++ GTGQ PKFAD ++ D + IPT+EV Sbjct: 180 ALINFMLDMHTEQHGYTEVFPPFLVNQESLRGTGQWPKFADQVYYIGEDDLYAIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTNL+ E++E+ +LP+ +T FR EAGS G+DTRG LR HQF K E+V TR EDS Sbjct: 240 LTNLHRGEMVETNALPISYTAYTACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEDS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 +T E + A+ IL+ L + YRV+ LC+GD+ +A K YD+EVW + Y E SSCS Sbjct: 300 YTALEEIRHHAQAILEALKIPYRVLLLCSGDISANATKCYDIEVWSPAEEKYLEASSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +Q+RR N R++ + +F HTLNGSG+A R ++++LE+Y ADG + +P VL+ Sbjct: 360 FEEYQARRSNIRFKPDSKSKPEFVHTLNGSGLATSRLMVSLLEHYQTADGHIRVPNVLQR 419 Query: 416 YMNNLAV 422 Y + Sbjct: 420 YTGFTEI 426 >gi|206901603|ref|YP_002251096.1| seryl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] gi|238065098|sp|B5YEY8|SYS_DICT6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|206740706|gb|ACI19764.1| seryl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] Length = 425 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 154/431 (35%), Positives = 246/431 (57%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ +R+NPE + + R+L+P +YIL LD K R L K+++ ++A+RN S + Sbjct: 1 MIDIKVLRENPELMKENIVLRNLDPNKYDVDYILELDAKRRSLQKELDTLKAQRNKISQE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ + L + TLKE++ LEKE ++ L + +PN + P G Sbjct: 61 IGKRKG----EEREELIKKAKTLKEKIEELEKEYEKIEKELYLKLWQLPNFLSPKAPKGK 116 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +NI I+ G + ++H ++ L+DF+R +K++G+ F L LE A Sbjct: 117 DEKDNIEIKRWGNIKTFTFTPKDHLDLALLNDLVDFERGSKVTGSNFYYLKNEAVLLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 L + +ID E G+ P L R E + G G P+ + LI T+E++ Sbjct: 177 LFRLVIDTLLPE-GFKLFITPDLARMEIIDGIGFQPRGPEAQIYRVEDTDLGLIATAEIT 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L + EI++ LPL++ + FR+EAG+ GR RG+ R HQF K E+ I R EDS Sbjct: 236 LGGYHKDEILDELDLPLKYLGFSHCFRTEAGAYGRYNRGLYRVHQFSKAEIFIICRPEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 HE +LS E+I ++L++ YRVV +C+GDLG A + +D+E W+ G+ + E++SCS Sbjct: 296 EEMHEYILSLEEKIFQKLEIPYRVVDICSGDLGAPAARKFDIEAWMPGRGDFGEVTSCSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++Q+RR+N R+R + +++ H LNG+ +A+ R LIAILENY DGS+ IP VL+P Sbjct: 356 CTDYQARRLNIRFRRVTGE-VEYVHMLNGTAIAISRALIAILENYQQEDGSILIPKVLQP 414 Query: 416 YMNNLAVIKKE 426 Y+ ++ IK + Sbjct: 415 YI-GISEIKPK 424 >gi|328883781|emb|CCA57020.1| Seryl-tRNA synthetase [Streptomyces venezuelae ATCC 10712] Length = 429 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 151/431 (35%), Positives = 243/431 (56%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++R+ + + I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKALGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A L + LK + E E++E + +KL+ + N+ +VP+G Sbjct: 61 KA----TPEERAELLQKAEQLKTDVKAAEAEQNEADETARKLLLQLGNIVHTDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + ++H E+GEALG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVVLETHGTIRDFAAEGFEPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+ + P LVR AM GTG + + A++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFIPMLTPALVRPRAMEGTGFLGQAAENVYHLEKDDYYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EIIE+ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S ED+ Sbjct: 236 AAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L ++V+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHKRLLEWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSL--KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR++ R RD + TLNG+ AV R ++AILEN+ ADGSV +P +LR Sbjct: 356 DSFQARRLSVRMRDDQGGKKVVQPLATLNGTLCAVPRTIVAILENHQLADGSVRVPEMLR 415 Query: 415 PYMNNLAVIKK 425 PY+ V++ Sbjct: 416 PYLGGREVLEP 426 >gi|291005181|ref|ZP_06563154.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 421 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 158/428 (36%), Positives = 242/428 (56%), Gaps = 10/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++PE + + + R + + +LS DE+ R + + + +RA + Q+G Sbjct: 1 MIDLKTLREDPEAVRASQRARGEDASVVDALLSADERRRSAVSRADSLRAEQKQLGKQVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + L Q+ E E+ E +L + + N+ VP G Sbjct: 61 KAAG----EEREHLLKKAKELSAQVKDAEAEQAEADQALVEAQKKLSNIVGPGVPPGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L VG P ++H E+G +LG MD +R K++GARF LTG A LE AL Sbjct: 117 DYAVLKH-VGVPPEFDFEVKDHLELGTSLGAMDMERGAKVAGARFYFLTGIGAQLELALL 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 H + +G+T V P+LVR E M GTG + + +++ D +L+ TSEV L Sbjct: 176 NMAA-AHATANGFTLVVPPVLVRPEIMEGTGFLGAHSSEVYRLEEDDLYLVGTSEVPLAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EII+ + PLR+ + FR EAGS GRDTRG++R HQF K E+ REED+ E Sbjct: 235 YHSGEIIDLGAGPLRYAGWSSCFRREAGSYGRDTRGIIRVHQFNKLEMFVYCREEDAVAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HER+L EE+L ++++ YRV+ GDLG SA + YD E W+ Q YRE++S S C Sbjct: 295 HERLLGWEEEMLAKIEVPYRVIDTAAGDLGASAARKYDCEAWIPSQQTYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+N+RYR+ + + TLNG+ +A R ++AILEN+ ADGSV +P LRP++ Sbjct: 355 FQARRLNTRYREADG-PTRIAATLNGT-LATTRWIVAILENHQQADGSVRVPEALRPFLG 412 Query: 419 NLAVIKKE 426 V++ Sbjct: 413 GREVLEPT 420 >gi|256545460|ref|ZP_05472822.1| serine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] gi|256398856|gb|EEU12471.1| serine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] Length = 429 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 140/431 (32%), Positives = 224/431 (51%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NP+ + +KK+ + + ++ LDEK R + + +++RA+RN S Q Sbjct: 1 MLDIKFVRENPDFVKENIKKKFQDEKLVLVDEVIKLDEKLRDVKTEGDNLRAKRNKTSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K E S + ++L +E++ + LK+ + IP + + VPIG Sbjct: 61 IGALMGQGKKDEAEKVKEEVSDINDRLVQIEEDTRKFQDQLKEKMQVIPQIIDDSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ + H +I E+ +D D A SGA F L G +A L A Sbjct: 121 DDSENVEIERFGENVTPDFEVPYHVDIMESFNGIDLDSARDTSGAGFYYLKGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + GY P ++R + + G + D M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DKGYEYHIPPFMIRSDVVTGVMSFAEMEDMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + I + +PLR T+ +P FR E G+ G + RG+ R HQF K E+V I + EDS Sbjct: 240 IGKFINSITDENEMPLRMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ + E + L++ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 KFYDELWKNTVEFFRSLEIPVRTLECCSGDLADLKVKSCDVEAWSPRQGKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R F HTLN + VA R LIA LEN L DGSV IP L+ Y Sbjct: 360 GDAQARRLKIRLRGEKGN--YFAHTLNNTVVAPPRMLIAFLENLLQEDGSVKIPKPLQMY 417 Query: 417 MNNLAVIKKEH 427 M + + ++ Sbjct: 418 MGGIEKLVPKN 428 >gi|257066090|ref|YP_003152346.1| seryl-tRNA synthetase [Anaerococcus prevotii DSM 20548] gi|256797970|gb|ACV28625.1| seryl-tRNA synthetase [Anaerococcus prevotii DSM 20548] Length = 429 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 141/431 (32%), Positives = 219/431 (50%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ +R+NPE + +KK+ + + +L LDEK R + +++R+ RN S + Sbjct: 1 MIDIKLLRENPELVKENIKKKFQDEKLVLVDEVLELDEKLRSFKTEGDNLRSERNKTSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + K + + ++L +E + E +KK + IP + + VPIG Sbjct: 61 IGALMGQGKKDEAEEAKAQVKEINDKLTDIEAKTEEYGKEVKKRMQVIPQIIDDSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 EN+ I G+ + H +I E +D D A SGA F L G +A L A Sbjct: 121 DDTENVEIEKFGEPVVPDYEIPYHIDIMETFDGVDLDAARDTSGAGFYYLRGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + GYT P ++R + + G + D M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGYTYYIPPFMIRSDVVTGVMSFSEMEDMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + I E + +PLR T+ +P FR E G+ G + RG+ R HQF K E+V I + EDS Sbjct: 240 IGKFINTINEEEKMPLRMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 T + + + + L++ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 TLYNELWKNTVDFFRSLEIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R N F HTLN + VA R LIA LEN + DGSV IP L+ Y Sbjct: 360 GDAQARRLGIRLRGENG--TYFAHTLNNTVVAPPRMLIAFLENLIQEDGSVKIPKPLQMY 417 Query: 417 MNNLAVIKKEH 427 M I+ ++ Sbjct: 418 MGGKDKIEPKN 428 >gi|302531546|ref|ZP_07283888.1| seryl-tRNA synthetase [Streptomyces sp. AA4] gi|302440441|gb|EFL12257.1| seryl-tRNA synthetase [Streptomyces sp. AA4] Length = 422 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 152/427 (35%), Positives = 240/427 (56%), Gaps = 10/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R++PE + + + R + + +L LD + R I + +RA + S S Q+ Sbjct: 1 MIDPRTLREDPEAVRASQRARGEDEGVVDKLLDLDTRRRSAIATADKLRAEQKSVSKQVP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + L L Q+ E E++E +L +PN+ + PIG Sbjct: 61 KASPEDKPA----LLARAKDLSAQVKAAEVEQNEASEEFDQLFRVLPNLVHPDAPIGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L VG+ P+ R+H ++ E LG +D +R K+SG+RF L+G A L+ AL Sbjct: 117 DFAVLKT-VGEVPTFDFAPRDHLDLMEGLGALDMERGAKVSGSRFYFLSGVGAQLQLALL 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 + T +G+T + P LVR E M GTG + + +++ D +L+ TSEV L Sbjct: 176 NMAVARAT-ANGFTPMITPSLVRPEIMAGTGFLGAHSSEVYRLRDDDLYLVGTSEVPLAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ + P R+ + +R EAGS G+DTRG++R HQF K E+ + ED+ E Sbjct: 235 YHSDEILDLSAGPRRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEMFVFAKPEDAEAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HER+L E++L +++ YRV+ TGDLG SA + YD E W+ Q YRE++S S C Sbjct: 295 HERLLGWEEDMLAAIEVPYRVIDTATGDLGTSAYRKYDCEAWVPTQETYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR++ RYRD N K + TLNG+ +A R ++AI+EN+ DGSV +P LRP++ Sbjct: 355 FQARRLSVRYRDDNGK-PQTAATLNGT-LATTRWIVAIVENHQQPDGSVRVPVALRPFLG 412 Query: 419 NLAVIKK 425 L V++ Sbjct: 413 GLEVLEP 419 >gi|21222366|ref|NP_628145.1| seryl-tRNA synthetase [Streptomyces coelicolor A3(2)] gi|289770434|ref|ZP_06529812.1| seryl-tRNA synthetase [Streptomyces lividans TK24] gi|8928384|sp|Q9ZBX1|SYS_STRCO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|3928737|emb|CAA22233.1| seryl-tRNA synthase [Streptomyces coelicolor A3(2)] gi|289700633|gb|EFD68062.1| seryl-tRNA synthetase [Streptomyces lividans TK24] Length = 425 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 150/429 (34%), Positives = 235/429 (54%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++RA + IG Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKGLGKLIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L LK + + E + ++L+ + N+ +VP+G Sbjct: 61 KAAGDEKAE----LLKRAEQLKTDVKAADAERDAADAETQELLQRLGNLVHPDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + + R+H E+G+ LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVTLETHGTHRDFAAEGFEPRDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L I + G+T + P LVR ++M GTG + + A D++ D +L+ TSEV L Sbjct: 177 LVNAAIAQ-ATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLDKDDLYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EI++ LPLR+ +P FR EAGS G+DTRG+ R HQF K E+ S EDS Sbjct: 236 AAYHMDEILDGDRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVLPEDSQ 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L +RV+ + + DLG SA + YD E W+ Q YRE++S S C Sbjct: 296 AEHQRLLEWEKQWLTSLELPFRVIDVASADLGSSAARKYDCEAWIPTQGKYRELTSTSDC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQSRR++ R R K ++ TLNG+ AV R ++AILEN+ ADGSV +P VLRPY Sbjct: 356 TEFQSRRLSIRVR--EGKKVRPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|296126531|ref|YP_003633783.1| seryl-tRNA synthetase [Brachyspira murdochii DSM 12563] gi|296018347|gb|ADG71584.1| seryl-tRNA synthetase [Brachyspira murdochii DSM 12563] Length = 426 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 192/429 (44%), Positives = 264/429 (61%), Gaps = 5/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ IR+N E ++ L+KR + + + +L+ + L+K++E RA++N S +IG+ Sbjct: 1 MIDVKLIRENIELVEENLRKRRSKVSLDKLKALEHERLNLLKEVEQDRAKKNEASKKIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + GN + +K E E L E++ E+ S+ I +PN+ E+VP G N Sbjct: 61 YMKAGNKEEAEKIKEEMKNFTESLNKKEEKLTELEESVNNEILYLPNMLSEDVPEGDDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N I G+ ++H ++ L ++D +RA +++ RFS++ G A LERAL Sbjct: 121 ANKEIIRWGEPRKFDFEVKDHVDVALGLDILDIERAVRMARTRFSLMKGKGAALERALIN 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+ HTSEHGYTE P+LV M GTGQ+PKF +D+F T +LIPT+EV LTN Sbjct: 181 FMLKKHTSEHGYTEYVPPMLVNSRTMTGTGQLPKFEEDLFKTTDDPALYLIPTAEVPLTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y EII LP+ T P FRSEAGS GRD RG++RQHQF K ELV + + S E Sbjct: 241 IYREEIIPENMLPIYATAYTPCFRSEAGSYGRDMRGLIRQHQFDKVELVKVCAADKSKEE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE+ML AE IL+ L+L YRVV L +GD+G +A KT+D+EVWL QN YREISS S C + Sbjct: 301 HEKMLKDAESILQALELPYRVVVLSSGDIGNAAYKTFDIEVWLPSQNTYREISSVSNCWD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +QSRRM R R + + HTLNGSG+AVGR IAILENY ADGSV IP LRP+ Sbjct: 361 YQSRRMQMRTRR--NGKTELVHTLNGSGIAVGRTWIAILENYQQADGSVIIPEALRPFT- 417 Query: 419 NLAVIKKEH 427 I+K + Sbjct: 418 GFDKIEKPN 426 >gi|313900857|ref|ZP_07834347.1| serine--tRNA ligase [Clostridium sp. HGF2] gi|312954277|gb|EFR35955.1| serine--tRNA ligase [Clostridium sp. HGF2] Length = 428 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 135/431 (31%), Positives = 235/431 (54%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + +KK+ + + ++++D++NR L ++ +++R++RN+ S + Sbjct: 1 MLDMKFLRENPEIVKENIKKKFQDHKIELVDKVIAMDKENRSLKQRGDELRSKRNAMSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G +A+K + T+ +++ E +E E+ +K+++ IPN+ VP+G Sbjct: 61 IGGLMAKGLKDEANAIKAKVQTMADEMKETEVKETELAEKIKEMMMQIPNIIHPTVPVGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ H +I E +D D A K++G F L G +A L A Sbjct: 121 DDSENVELQKYGEPVIPDFEIPYHTDIMERFEGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T V P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYVVPPFMIRSNVVTGVMSFAEMEGMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I++ K LP +T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTILDEKKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ + ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 DWFVKLYTNTVDLFRSLDIPVRTLECCSGDLADLKNKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + Q+RR+ R + N K F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 TDAQARRLGIRVKGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNKDGSVNIPEKLQPY 417 Query: 417 MNNLAVIKKEH 427 M ++ ++ Sbjct: 418 MGGTKILMPKN 428 >gi|325478615|gb|EGC81727.1| serine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13] Length = 429 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 139/431 (32%), Positives = 225/431 (52%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ +R+NP+ + +KK+ + + + +L LDEK R + +++R++RN S + Sbjct: 1 MIDIKLLRENPDLVKENIKKKFQDDKLKLVDEVLDLDEKLRSFKTEGDNLRSQRNKTSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + K + ++L +E + + + +KK + IP + + VP+G Sbjct: 61 IGALMAQGKKDAAEDAKKLVKDINDKLEHIEADTEKFAAEVKKRMQVIPQIIDDTVPLGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G H H +I E+ +D D A + SGA F L G +A L A Sbjct: 121 DDSENVEIEKYGDPVVPDHDVPYHIDIMESFDGVDLDAARETSGAGFYYLRGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + GYT P ++R + + G + D M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGYTYYIPPFMIRSDVVTGVMSFSEMEDMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + I E + +PLR T+ +P FR E G+ G + RG+ R HQF K E+V I + EDS Sbjct: 240 IGKFINTITEEEKMPLRMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ + + + + L++ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 KFYDELWNNTVDFFRSLEIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R + F HTLN + VA R LIA LEN L DGSV IP L+ Y Sbjct: 360 GDAQARRLGIRLRGEDG--TYFAHTLNNTVVAPPRMLIAFLENLLQEDGSVRIPEPLQMY 417 Query: 417 MNNLAVIKKEH 427 M I+ ++ Sbjct: 418 MGGKDKIEPKN 428 >gi|108803927|ref|YP_643864.1| seryl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] gi|123069166|sp|Q1AX26|SYS_RUBXD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|108765170|gb|ABG04052.1| seryl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] Length = 424 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 159/427 (37%), Positives = 239/427 (55%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+N E + + R +E + ++ L ++ LI+++E +RAR+N + + Sbjct: 1 MLDLRYIRENAEAVKKNCRDRGVEADVDLVVELADRRSALIRELEGLRARQNQLAKAVA- 59 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + L E+ LK +P E+E V L + IPN+ E P+G + Sbjct: 60 --KERDERSRGRLIEESRELKGLIPRREEELRGVEERLAEEQLKIPNMTHPEAPVGRDDS 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ IR G+ P ++H E+GEALG++DFD K +G++F L G LE L + Sbjct: 118 ENVEIRRWGEAPEFGFEPKDHVELGEALGIIDFDAGAKTTGSKFYFLRGEAVLLELGLVR 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 F +DL + GY P L RD + GTG +P+ + LI T+E++L Sbjct: 178 FALDL-LAGRGYELAMTPDLARDRMLLGTGFVPRGPETQIYSVENTDLSLIATAEITLAG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EI+ +SLP RF L+ FR+EAG+ GR +RG+ R HQF K E+ + T E S Sbjct: 237 QLVDEIVAEESLPRRFAGLSHCFRTEAGAHGRASRGLYRVHQFTKVEMFAFTTPEQSGEM 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE MLS EEI + L++ YRVV +CTGDLG +A + YD+E W+ G+ Y E++S S + Sbjct: 297 HEEMLSIEEEIFRTLEIPYRVVDICTGDLGAAAYRKYDVEAWMPGRGDYGEVTSTSNTTD 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR+ RYR + + HTLNG+ +AV R +IA+LEN+ DGSV +P L PY+ Sbjct: 357 YQARRLGIRYRPEGGR-PRLLHTLNGTAIAVSRTMIALLENHQREDGSVALPEALVPYV- 414 Query: 419 NLAVIKK 425 VI Sbjct: 415 GREVIGP 421 >gi|291548778|emb|CBL25040.1| seryl-tRNA synthetase [Ruminococcus torques L2-14] Length = 429 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 138/431 (32%), Positives = 225/431 (52%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NP+ + +K + + P + ++ LD++NR + +++E +RA +N S + Sbjct: 1 MLDIKFVRNNPDVVKQNIKNKFQDEKLPLVDEVIELDKRNREIKQEVEALRAEKNKASKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+ + +ALK + + ++ L +EE EV LKK + IPN+ VPIG Sbjct: 61 IGAMMAQKKIEEAEALKKKVAESNGRINELSEEEKEVEEKLKKNMMIIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +ENI + G+ H +I E+ +D D A +++G F L G +A L A Sbjct: 121 DDSENIEVERFGEPVVPDFEVPYHTDIMESFNGIDLDAARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + +E +P T+ +P FR E G+ G + RG+ R HQF K E++ + E+S Sbjct: 240 IGKFIGQTLEKDQVPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCEPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWYDKLWKNTVDLFRSMDIPVRTLECCSGDLADLKVKSVDVEAWSPRQQKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + N F HTLN + VA R LIA LEN L ADGSV IP VL+PY Sbjct: 360 GDAQARRLGIRIKGENGS--YFAHTLNNTVVAPPRMLIAFLENNLQADGSVRIPEVLQPY 417 Query: 417 MNNLAVIKKEH 427 M I ++ Sbjct: 418 MGGNKEITPKN 428 >gi|323487011|ref|ZP_08092323.1| hypothetical protein HMPREF9474_04074 [Clostridium symbiosum WAL-14163] gi|323692053|ref|ZP_08106300.1| seryl-tRNA synthetase [Clostridium symbiosum WAL-14673] gi|323399659|gb|EGA92045.1| hypothetical protein HMPREF9474_04074 [Clostridium symbiosum WAL-14163] gi|323503853|gb|EGB19668.1| seryl-tRNA synthetase [Clostridium symbiosum WAL-14673] Length = 425 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 139/428 (32%), Positives = 223/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + +K + + + + ++ LD KNR K+ +D+RA +N + Q Sbjct: 1 MLDLKFVRENPEIVKQNIKNKFQDSKLGLVDEVIELDAKNRAAKKEADDLRANKNKIAKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + + +L LE++E E+ + K++ IPN+ VPIG Sbjct: 61 IGALMGQGKKDEAEEMKKQVAEQSARLAALEEQEKELGDKILKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEVQKYGEPVIPDFEIPYHTEIMERFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +I+ + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTVIQEEELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSLDVPVRTLECCSGDLADLKVKSVDVEAWSPRQQKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K F HTLN + VA R LIA LEN L ADGSV IP LRPY Sbjct: 360 GDAQARRLKIRVNGQDGK--YFAHTLNNTVVAPPRMLIAFLENNLQADGSVRIPEPLRPY 417 Query: 417 MNNLAVIK 424 M + I+ Sbjct: 418 MGGMTEIR 425 >gi|163753729|ref|ZP_02160852.1| serine-tRNA synthetase [Kordia algicida OT-1] gi|161325943|gb|EDP97269.1| serine-tRNA synthetase [Kordia algicida OT-1] Length = 423 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 166/426 (38%), Positives = 249/426 (58%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML +Q+IR+N + ALKKR+ + ++SLDE R L ++++ A N S +I Sbjct: 1 MLQLQFIRENKAEIIEALKKRNFDATEVVNEVVSLDEARRSLQVELDNTLASSNKLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 GQ G + L+ +++ LK Q L+ + E +S+ +L+ IPNVP E VP G S Sbjct: 61 GQLFKSGERQKAEILREKSTQLKSQAESLKADLKEKETSVAELLYTIPNVPNELVPAGNS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N + G P+ ++ H+E+ + ++DF+ K++GA F V G A L+RAL Sbjct: 121 EDDNEEVFRKGDIPTLHENAQPHWELAKKYDIIDFELGNKITGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 Q+ +D +T + GYTE P LV + + YGTGQ+P M+ T D +LIPT+EV +T Sbjct: 181 IQYFLDKNT-DAGYTEYQVPHLVNEASGYGTGQLPDKEGQMYHVTADDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ +++++ LP+ T P FR EAGS G RG+ R HQF K E+V I R EDS+ Sbjct: 240 NMFRGDLLKADDLPICCTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIERPEDSYK 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M++ +EIL+ L L YR++ LC GDLGF+A TYD EV+ Q+ + EISS S Sbjct: 300 ALDGMVNHVKEILEELKLPYRILRLCGGDLGFTAALTYDFEVFSTAQDRWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R +D + K + HTLNGS +A+ R L ILENY +G + IP VL+ Y Sbjct: 360 TFQANRLKLRIKDKDGKK-QLAHTLNGSALALPRVLAGILENYQTENG-IEIPEVLQKYT 417 Query: 418 NNLAVI 423 +I Sbjct: 418 -GFDII 422 >gi|167748072|ref|ZP_02420199.1| hypothetical protein ANACAC_02816 [Anaerostipes caccae DSM 14662] gi|167652064|gb|EDR96193.1| hypothetical protein ANACAC_02816 [Anaerostipes caccae DSM 14662] Length = 425 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 226/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + +K + + P + +L LDEKNR + ++++ +RA RN S Q Sbjct: 1 MLDIKFVRENPEAVKQNIKNKFQDRKLPLVDEVLELDEKNREIKQEVQSLRANRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK E S ++ L +EE EV + K++ IPN+ VPIG Sbjct: 61 IGGLMAQGKKEEAEQLKQEVSNQAGRIEELTEEEKEVEEKILKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIEKFGEPIVPDFEIPYHTEIMENFSGIDLDSARKVAGQGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFDEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +I+ + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + ++S Sbjct: 240 IGKFIDTMIQEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPQESM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 DWYEKLWKNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K + HTLN + VA R LIA LEN L ADGSV IP L+PY Sbjct: 360 GDAQARRLKIRVNGEDGK--YYAHTLNNTVVAPPRMLIAFLENNLQADGSVKIPEALQPY 417 Query: 417 MNNLAVIK 424 M + VI+ Sbjct: 418 MGGMNVIQ 425 >gi|148240241|ref|YP_001225628.1| seryl-tRNA synthetase [Synechococcus sp. WH 7803] gi|166223303|sp|A5GN16|SYS_SYNPW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|147848780|emb|CAK24331.1| Seryl-tRNA synthetase [Synechococcus sp. WH 7803] Length = 425 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 186/430 (43%), Positives = 262/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R+NPE + L +R L + +L ++ R L ++ ++A N ++G Sbjct: 1 MLDQRLVRENPELMARELARRGLTVDLNSLQALAQQQRDLEEQRSSLQAEGNRVGKEVGL 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G S V L+ + + +K+++ +LE EE ++ + LK + PN+P P G Sbjct: 61 KIKAGADPKGSDVAELRQQGNAIKQKVAVLEDEERQLAAELKTQLLTFPNLPSPACPDGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+NI +RS G P EH+ I + LGL+D +R+ +++ +RF L G A LERA Sbjct: 121 DENDNIEVRSWG-DPRRQEGLDEHWAIADRLGLLDSERSVRIAQSRFVTLFGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLHT GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV L Sbjct: 180 LINFMLDLHT-GKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCADDDLWLTPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII LPLR+ +P FR EAGS GRDTRG++R HQF K EL + + Sbjct: 239 TSLHRDEIIPLDQLPLRYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVHPDHAD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H + + AE +L+ L+L YRV+ LCTGDLGFSA +TYDLEVWLAG YREISSCS C Sbjct: 299 EAHAAITADAEAVLQALELPYRVLELCTGDLGFSAARTYDLEVWLAGAGAYREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR + R + K+ + HTLNGSG+A+GR + A+LEN ADGSV +P L PY Sbjct: 359 GDFQARRSSIR--TKDGKTTRLVHTLNGSGLAIGRTMAALLENGQQADGSVLLPQALVPY 416 Query: 417 MNNLAVIKKE 426 ++ E Sbjct: 417 F-GSDRLQPE 425 >gi|325265456|ref|ZP_08132179.1| serine--tRNA ligase [Clostridium sp. D5] gi|324029314|gb|EGB90606.1| serine--tRNA ligase [Clostridium sp. D5] Length = 428 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 142/431 (32%), Positives = 226/431 (52%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NP+ + +KK+ + + + +L LD+KNR + +++E +RA +N S + Sbjct: 1 MLDIKFVRSNPDAVKQNIKKKFQDDKLHLVDEVLELDQKNRDIKQEVEALRADKNKISKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G LK + + +++ L EE EV ++KK++ IPN+ VPIG Sbjct: 61 IGAMMAQGKKEEAAVLKQKVAENADRMEALSAEEKEVEENIKKIMMIIPNIIDSSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI E +D D A +++G F L G +A L A Sbjct: 121 DDSENVEVERYGEPVVPDFEIPYHTEIMERFNGIDLDSARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPYMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTQLAESELPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWYDKLWQNTVDLFRSLDVPVRTLECCSGDLADLKVKSVDVEAWSPRQEKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K+ F HTLN + VA R LIA LEN L ADGSV IP LRPY Sbjct: 360 GDAQARRLGIRVK--GDKTKYFAHTLNNTVVAPPRMLIAFLENNLQADGSVKIPEALRPY 417 Query: 417 MNNLAVIKKEH 427 M AV+ ++ Sbjct: 418 MGGNAVMTPKN 428 >gi|254520356|ref|ZP_05132412.1| seryl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226914105|gb|EEH99306.1| seryl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 425 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 148/428 (34%), Positives = 229/428 (53%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + +K + + P + ++ LD+K R ++ E +RA RN S Q Sbjct: 1 MLDLKFVRENPEIVKKNIKNKFQDSKLPLVDEVIELDKKLREAKQQAEALRADRNKFSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + + E+L LE +E E+ + ++ +PN+ VPIG Sbjct: 61 IGALMAQGKREEAEEMKRKVTENSERLSELEVKETELSERVNNIMMTLPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI E L +D D A K++G+ F L G++A L A Sbjct: 121 DDSENVEVERFGEPKVPDFEVPYHTEIMEKLSGLDLDSARKVAGSGFYYLMGNVARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 IISYARDFMI-DRGFTYCIPPYMIRSEVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 Y I+ SLP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKYIDTILPEDSLPHTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E++ E+ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 DWYEKLWVNTVELFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K F HTLN + VA R LIA LEN LN DGSV IPT L+PY Sbjct: 360 GDAQARRLKIRVNSKDGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPTALQPY 417 Query: 417 MNNLAVIK 424 M N+ VIK Sbjct: 418 MGNMKVIK 425 >gi|291438592|ref|ZP_06577982.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291341487|gb|EFE68443.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 425 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 148/429 (34%), Positives = 240/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++RA + + + Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKALGKLVP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + LK + + + + ++L+ + N+ +VP+G Sbjct: 61 KATGDEKAE----LLKKAEQLKADVKAADADRDAAAAETQELLLKLGNLIHPDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +V + ++H E+G+ LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVTLETHGTVRDFAAEGFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L I + G+T + P LVR ++M GTG + + A D++ D +L+ TSEV L Sbjct: 177 LVNAAIAQ-ATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLDKDDLYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII++ LPLR+ +P FR EAGS G+DTRG+ R HQF K E+ S E+S Sbjct: 236 AAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEESQ 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L +RV+ + +GDLG SA + YD E W+ Q YRE++S S C Sbjct: 296 AEHQRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKYDCEAWIPTQGKYRELTSTSDC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQSRR+ R RD K+++ TLNG+ AV R ++AILEN+ ADGSV +P VLRPY Sbjct: 356 TEFQSRRLQIRVRD--GKTVRPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKK 425 + +++ Sbjct: 414 LGGREILEP 422 >gi|114776321|ref|ZP_01451366.1| seryl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] gi|114553151|gb|EAU55549.1| seryl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] Length = 427 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 182/431 (42%), Positives = 256/431 (59%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-----QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 M+D Q +R++ + + AL +R + + LD + R L + E ++A RN S Sbjct: 1 MIDRQALRRDFDSMQAALARRGEDVVGAGSAWAKVALLDIRQRELKTESEALQADRNRVS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IGQ G + + + Q L+ + + + + IPN + VP Sbjct: 61 KLIGQKKGAGEDASAE--MAAMGEVARQAKALDAQAKDAEAEFAAALLEIPNPLHDSVPN 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G S ++N+ + G + H++IG LG++DF+ L+G+RF+V+ G A +E Sbjct: 119 GASEDDNVEVSRWGNPR--MDEVPPHWDIGVDLGILDFEAGATLAGSRFTVMKGAAARME 176 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEV 234 RAL QFM+DLH HGY EV P + + M GTGQ+PKFADD++ + +LIPT+EV Sbjct: 177 RALMQFMLDLHADAHGYQEVWVPAIANSKTMTGTGQLPKFADDLYKLEGEDAFLIPTAEV 236 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TNLY +I+++ LP R P FR EAGSAGRD RG++RQHQF K ELV IT E Sbjct: 237 PVTNLYQDKILDASELPKRHCAYTPCFRREAGSAGRDERGIIRQHQFDKVELVHITTPER 296 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 + ++ E + + AE +L+ L+L YR V LC+ D+GFS+ KTYDLEVWL QN YREISSCS Sbjct: 297 ALSDLEELTAHAEAVLQALELPYRKVELCSADIGFSSQKTYDLEVWLPSQNCYREISSCS 356 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 + G FQ RR RYRD + K + TLNGSG+A+GRCL+A+LEN +DGSV IP VL+ Sbjct: 357 SFGQFQGRRAGIRYRDESGK-PQPAATLNGSGLAIGRCLVAVLENGWQSDGSVLIPQVLQ 415 Query: 415 PYMNNLAVIKK 425 PYM + I Sbjct: 416 PYMGGMQRITP 426 >gi|325286672|ref|YP_004262462.1| seryl-tRNA synthetase [Cellulophaga lytica DSM 7489] gi|324322126|gb|ADY29591.1| seryl-tRNA synthetase [Cellulophaga lytica DSM 7489] Length = 423 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 167/421 (39%), Positives = 241/421 (57%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML +Q IR+ + + IALKKR+++ P E +LSLDEK R K+++ A N S +I Sbjct: 1 MLQLQAIREQKDEIIIALKKRNIDAAPLLENVLSLDEKRRDAQTKLDNTLAESNKLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G S LK T LKE+ ++E + V L+ L+ IPNVP VP G + Sbjct: 61 GMLFKSGKASEATVLKERTVVLKEESKTYQEELNTVAEELQSLLYQIPNVPHPSVPAGNT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N I G P I + H+E+ + ++DF+ K++GA F V G A L+RAL Sbjct: 121 DEDNEEIFREGDIPELIEGALPHWELAKKYDIIDFELGVKIAGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 + +D +T GY E+ P LV + + YGTGQ+P M+ T D +LIPT+EV +T Sbjct: 181 IAYFLDKNT-AAGYQEIQVPHLVNETSGYGTGQLPDKEGQMYHVTADDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ + I+ K P+ +T P FR EAGS G RG+ R HQF K ELV + ++S+ Sbjct: 240 NIFRNTIVNQKDFPITYTGYTPCFRREAGSYGAHVRGLNRLHQFDKVELVRVEHPDNSYA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ ++IL+ L L YR++ LC GDLGF++ T+D EV+ Q+ + EISS S Sbjct: 300 ALDGMVEHIKDILRELKLPYRLLRLCGGDLGFTSALTFDFEVFSTAQDRWLEISSASNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +Q+ R+ R++D N KS +F HTLNGS +A+ R L ILENY G + IP VL PY Sbjct: 360 AYQANRLKLRFKDENGKS-QFAHTLNGSSLALPRVLAGILENYQTEKG-IKIPDVLVPYC 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|270307939|ref|YP_003329997.1| seryl-tRNA synthetase [Dehalococcoides sp. VS] gi|270153831|gb|ACZ61669.1| seryl-tRNA synthetase [Dehalococcoides sp. VS] Length = 413 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 169/425 (39%), Positives = 258/425 (60%), Gaps = 13/425 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+N E + A+ R+ + + IL LD + R L ++++++RA+R + Q Sbjct: 1 MLDLKFIRENAELVRKAVADRNTDAPIDEILELDNRRRHLTQELDNLRAKRKMMAKQ--- 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 D E L+ Q+ LE E EV L + +PN+P VP+G + Sbjct: 58 --------RDDTAIEEGRVLRGQITELEAELSEVDEKLTDRLLRVPNIPDASVPVGRDES 109 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+++ G+K S + H+E+GE L ++DFDR KLSG+RF +L G A L+RAL Sbjct: 110 ENVVLYYRGEKRSFSFTPKPHWELGETLDIIDFDRGIKLSGSRFYILKGEGARLQRALIA 169 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHT +H YTE+ P +++ E + +G +PKFAD+++ + W +PT+E LTNL Sbjct: 170 FMLDLHTRKHDYTEIYPPYMIKRECLVASGNLPKFADNLYHDAEEDYWWVPTAEAPLTNL 229 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ + LP+ + FR E SAG+D RG+ R HQF K EL + EDSF E Sbjct: 230 HRDEILSVEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFDEL 289 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M++ AEEI L + YR+ L T D+ F + K+YD+E++ G + + E+SSCS C +F Sbjct: 290 EKMVADAEEIADALKIPYRLKQLVTADISFGSAKSYDIEMYSPGVDEWLEVSSCSNCTDF 349 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q RR N R+R + +F HTLNGSG+A+ R +I+++ENY DGS+ +P VLRP+M Sbjct: 350 QGRRANVRFRRTSEAKPEFVHTLNGSGLALPRVMISVIENYQQPDGSIVVPEVLRPFM-G 408 Query: 420 LAVIK 424 + VI+ Sbjct: 409 VDVIR 413 >gi|170017957|ref|YP_001728876.1| seryl-tRNA synthetase [Leuconostoc citreum KM20] gi|238688940|sp|B1MW28|SYS_LEUCK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|169804814|gb|ACA83432.1| seryl-tRNA synthetase [Leuconostoc citreum KM20] Length = 436 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 187/434 (43%), Positives = 265/434 (61%), Gaps = 15/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+++R+N L+ R +E + +LSLD+ R I+++E ++A+RN S +I Sbjct: 1 MLDIKYLRKNVAEATRRLQDRGIESEKLTTLLSLDKARREAIQQVESLKAQRNEVSDKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A N + + ++ L+ + + +K L + +PN+ +VP+G Sbjct: 61 YAKR--NKTDASEAILAMQEVGSKIKALDARQASLDMEVKNLAAHLPNLAASDVPVGPDE 118 Query: 120 NENILIRSVGK---------KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 N+ R A + H+E+GE LG++DF+R K+SGARF G Sbjct: 119 AANVEQRVWEPKTYGQRLKAHQEAPEWLKAHYEVGETLGILDFERGAKVSGARFLYYVGD 178 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLI 229 A LERA+ FM+D H + GYTE+ P++V D AM+GTGQ PKF DD + + I Sbjct: 179 GARLERAVYNFMLDEH-RQEGYTEMITPIVVNDAAMFGTGQYPKFQDDAYRVEGLEQTYI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN YS E + ++ LP++FT L+PSFR EAG+AG+DTRG++R HQF K E+V Sbjct: 238 PTAEVPLTNYYSGETLPAEDLPIKFTALSPSFRKEAGAAGKDTRGLIRLHQFNKVEMVKF 297 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ E S+ E E M + AE IL++L L Y V+ L TGD+GFSA KTYD+EVW+ Q +YRE Sbjct: 298 TKPEQSYEELESMTANAENILQKLGLPYHVIMLSTGDMGFSAAKTYDVEVWMPQQQVYRE 357 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISS S +FQ+RRM+ YR+ + L HTLNGSG+AVGR + AILENY N DGSVT+ Sbjct: 358 ISSVSNTEDFQARRMHITYRNEAGQ-LALVHTLNGSGLAVGRTVAAILENYQNPDGSVTV 416 Query: 410 PTVLRPYMNNLAVI 423 P VLRPY+ + Sbjct: 417 PEVLRPYLGGQDKL 430 >gi|332878894|ref|ZP_08446609.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683245|gb|EGJ56127.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 423 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 158/426 (37%), Positives = 237/426 (55%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + IR+ + + LKKR+ + + I++LDEK R +++ A+ N+ S +I Sbjct: 1 MLQLNTIREEKDRVLAGLKKRNFKELGLIDEIIALDEKRRSTQLALDESLAKSNTLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G +ALK ET+TLK+ + L + SL +L+ +PN+P + VP GTS Sbjct: 61 GSLFKSGETEKANALKAETATLKDTIKTLTDTLNGTVESLNELLYRVPNIPNDLVPEGTS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+++ G+ P+ + H+E+ + L+DF+ KL+GA F V G A L+RAL Sbjct: 121 EADNVVVFEAGEIPNLGKDALPHWELAKKYDLIDFELGVKLTGAGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T E GY E P +V + + YGTGQ+P M+ D +LIPT+EV +T Sbjct: 181 ITYFLDKNT-EAGYNEYQVPHVVNEASGYGTGQLPDKEGQMYHVGVDNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++ LP+ T P FR EAGS G RG+ R HQF K E+V I + S+ Sbjct: 240 NIFRDTLLNESDLPICCTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDHSYK 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ + IL L L Y ++ LC GDLGF++ TYD EV+ Q + EISS S Sbjct: 300 ALEGMIEHVKGILNELKLPYHILRLCGGDLGFTSAITYDFEVYSTAQEKWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R++D K+ + HTLNGS +A+ R L ILENY +G + +P VLR Y Sbjct: 360 TFQANRLKLRFKDNEGKN-RLVHTLNGSSLALPRVLAGILENYQTPEG-IVVPEVLRKYT 417 Query: 418 NNLAVI 423 +I Sbjct: 418 -GFDII 422 >gi|309774995|ref|ZP_07670011.1| serine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308917249|gb|EFP62973.1| serine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 428 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 136/430 (31%), Positives = 234/430 (54%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + +KK+ + + ++++D++NR L ++ +++R++RN+ S + Sbjct: 1 MLDMKFLRENPELVKENIKKKFQDHKIELVDKVIAMDKENRSLKQRGDELRSKRNAMSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G +A+K + + +++ E +E E+ +K+++ IPN+ VPIG Sbjct: 61 IGGLMAKGLKDEANAIKAKVQAMADEMKETEIKESELAEKIKEMMMQIPNIIHATVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ H EI E+ +D D A K++G F L G +A L A Sbjct: 121 DDSENVELQKYGEPAVPDFEIPYHTEIMESFDGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T V P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYVVPPFMIRSNVVTGVMSFAEMEGMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I++ K LP +T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTILDEKKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ + ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWFVKLYTNTVDLFRSLDIPVRTLECCSGDLADLKNKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + Q+RR+ R + N K F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 TDAQARRLGIRVKGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNKDGSVNIPEKLQPY 417 Query: 417 MNNLAVIKKE 426 M ++ + Sbjct: 418 MGGTKILMPK 427 >gi|194336041|ref|YP_002017835.1| seryl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|238693405|sp|B4SF71|SYS_PELPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|194308518|gb|ACF43218.1| seryl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 431 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 168/421 (39%), Positives = 255/421 (60%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI IRQ+PE + L R L EP+ E +L+LD + + L+++ +D++A RN S + Sbjct: 1 MLDINTIRQHPEEIISMLHNRQLASEEPKIEQLLNLDRERKGLVQRSDDLKALRNKVSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + G S + L + ++ E++ ++ + ++ ++ +PN VP+G Sbjct: 61 IAEIKKSGIGSSGE-LILQMKSVSEEIAGMDTSLGHLEEEIETILLGLPNKLHPSVPVGR 119 Query: 118 SANENILIRSVGKKPSA-IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 SA++N + + P + H E+G++L ++DF+R K+ GA F V G A LER Sbjct: 120 SADDNQIFKEPISFPYHLDFPLKNHLELGKSLRILDFERGAKVCGAGFPVYIGKGARLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVS 235 AL FM+D HT HGYTEV P V E++ GTGQ PKFAD + D + IPT+EV Sbjct: 180 ALINFMLDCHTERHGYTEVFPPFFVNQESLRGTGQWPKFADQVYHMEEDDLYAIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNL+ E++++K+LP+ + + FR EAGS G+DTRG LR HQF K E+V TR E+S Sbjct: 240 ITNLHRGEMLDTKTLPISYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEES 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E + AE IL L + YRV+ LC+GD+ +A K YD+EVW + Y E SSCS Sbjct: 300 YEALETIRENAEAILTALKIPYRVLLLCSGDISANATKCYDIEVWSPAEQKYLEASSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RR N R++ ++ +F HTLNGSG+A R ++++LE+Y A+GS+ +P VLR Sbjct: 360 FEDYQARRANIRFKSESNAKPEFVHTLNGSGLATSRLMVSLLEHYQTAEGSIMVPEVLRH 419 Query: 416 Y 416 Y Sbjct: 420 Y 420 >gi|251771791|gb|EES52366.1| seryl-tRNA synthetase [Leptospirillum ferrodiazotrophum] Length = 435 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 194/431 (45%), Positives = 261/431 (60%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD I ++PE A + R E E +L LD + ++ E +R RRN+ S++IG+ Sbjct: 1 MLDRNRILKDPEAAARAFRARQTEIDLEGLLDLDGRWFEANREWERLRERRNALSSEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + L E + E + + E+ ++ +PN+P VP+G N Sbjct: 61 KKRAGEPT--EELYAEVLRINEAIEASDTLRRELDRQREERWLLLPNIPDASVPVGQDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ IR VG PS R H+E+G LG++DFDRA ++SGARFS+L G A LERAL Sbjct: 119 ENVEIRRVGTPPSFSFAPRPHWEVGAGLGILDFDRAARMSGARFSILLGAGARLERALIS 178 Query: 181 FMIDLHTSEHG----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 FM+D HT Y E+S P +V E++ TGQ+PKF +++F D +LIPT+EV Sbjct: 179 FMLDCHTGPREGESAYRELSVPYMVLPESLLATGQLPKFREELFHMPADDLFLIPTAEVP 238 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TN Y EI++ LP++F+ FR EAG+AG+DTRG++RQHQF K ELV ++ E S Sbjct: 239 VTNYYRGEILDEADLPVKFSAYTACFRREAGAAGKDTRGLIRQHQFDKVELVWLSTPESS 298 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 ER+ A IL+RL L YRV+SLCTGDLGFS+ KTYD+EVWL Q YREISSCS Sbjct: 299 MENLERLTRDATTILERLGLPYRVISLCTGDLGFSSAKTYDVEVWLPSQGRYREISSCSN 358 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR RYR + ++ HTLNGS +AVGR L AILEN+ DGSV +P L P Sbjct: 359 FMDFQARRAQIRYRRTADRKVQLVHTLNGSALAVGRTLAAILENFQTEDGSVLVPEALHP 418 Query: 416 YMNNLAVIKKE 426 YM L I E Sbjct: 419 YMGGLTRISPE 429 >gi|225620534|ref|YP_002721791.1| seryl-tRNA synthetase [Brachyspira hyodysenteriae WA1] gi|254783009|sp|C0R1U9|SYS_BRAHW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|225215353|gb|ACN84087.1| seryl-tRNA synthetase [Brachyspira hyodysenteriae WA1] Length = 426 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 192/429 (44%), Positives = 265/429 (61%), Gaps = 5/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ IR+N E ++ L+KR + + + +L+ + L+K++E RA++N +S +IG+ Sbjct: 1 MIDVKLIRENIELVEENLRKRRSKVSLDKLKALEHERLDLLKEVEQDRAKKNESSKKIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + GN + +K E E L E++ ++ ++ I +PN+ E+VP G Sbjct: 61 YMKAGNKEEAEKIKEEMKNFTESLNKKEEKLSQLEEAVNNEILYLPNMLSEDVPDGDDEK 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N I G+ ++H +I L ++D +RA ++S RFS++ G A LERAL Sbjct: 121 ANKEIIRWGEPRKFDFEVKDHVDIAMGLDILDIERAVRMSRTRFSLMKGKGAALERALIN 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+ HTSEHGYTE P+LV M GTGQ+PKF +D+F T +LIPT+EV LTN Sbjct: 181 FMLKKHTSEHGYTEYVPPILVNGRTMTGTGQLPKFEEDLFKTTDDPALYLIPTAEVPLTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y EII LPL T P FRSEAGS GRD RG++RQHQF K ELV I + S E Sbjct: 241 IYREEIIPENMLPLYCTAYTPCFRSEAGSYGRDMRGLIRQHQFDKVELVKICAADKSKEE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE+ML AE IL+ L+L YRVV L +GD+G +A KT+D+EVWL QN+YREISS S C + Sbjct: 301 HEKMLKDAESILQALELPYRVVVLSSGDIGNAAYKTFDIEVWLPSQNMYREISSVSNCWD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RRM R R + + HTLNGSG+AVGR IAILENY ADGSV IP LRP+ Sbjct: 361 YQARRMQMRTRR--NGKTELVHTLNGSGIAVGRTWIAILENYQQADGSVIIPDALRPFT- 417 Query: 419 NLAVIKKEH 427 I+K + Sbjct: 418 GFDKIEKPN 426 >gi|315186579|gb|EFU20338.1| seryl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 425 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 154/428 (35%), Positives = 244/428 (57%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++++++ + + ++ R +E E +++L ++ L +++++RARRN ++ Sbjct: 1 MLDLRFVKEHVDLVKENVRNRFMEVDVEGVVALYDRRNDLKARVDELRARRNEHAR---- 56 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + AL E LKE++ LE E V L++ IPN+ E P+G Sbjct: 57 LMKSASPEERPALVEEGRRLKEEIARLEGELAAVEEELRREALRIPNLSHPEAPVGKEEK 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G+ PS R+H E+G L ++DFDRA K+SGA+F L LE AL + Sbjct: 117 DNLEIRRWGEVPSFDFEPRDHLELGRLLDIVDFDRAAKVSGAKFYYLKNEGTLLELALIR 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 + +D+ E G+ + P L R+ + G G P+ A+ T L+ T+E++L Sbjct: 177 YALDV-LREKGFDLFTTPDLARESIVEGIGFQPRGAESNIYTVEETDLCLVGTAEITLGG 235 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y+ EII ++LPLRF L+ FR EAG+AG+ ++G+ R HQF K E+ R E+S Sbjct: 236 MYADEIIPGQALPLRFAGLSHCFRKEAGAAGQYSKGLYRVHQFTKVEMFVYCRPEESEGM 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H +L+ EEI L + YRVV CTGDLG A + +DLE W+ G+ + EI+S S C + Sbjct: 296 HRELLAIEEEIHAGLGIPYRVVDTCTGDLGAPAYRKFDLEAWMPGREGWGEITSTSNCTD 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR+ R+++ +F H LNG+ +AV R +IAILEN+ DGSV IP L PY Sbjct: 356 YQARRLGVRFKEAEGGKPRFVHMLNGTALAVPRVIIAILENFQERDGSVRIPEALVPYT- 414 Query: 419 NLAVIKKE 426 VI+ + Sbjct: 415 GFDVIRPK 422 >gi|225570312|ref|ZP_03779337.1| hypothetical protein CLOHYLEM_06409 [Clostridium hylemonae DSM 15053] gi|225160844|gb|EEG73463.1| hypothetical protein CLOHYLEM_06409 [Clostridium hylemonae DSM 15053] Length = 427 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 146/430 (33%), Positives = 230/430 (53%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NP+ + +KK+ + P + +L LD+KNR + +++E +RA RN S Q Sbjct: 1 MLDIKFVRNNPDIVKENIKKKFQDDKLPLVDEVLQLDQKNRDIKQEVEALRADRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + +++ L EE +V +KK++ IPN+ VPIG Sbjct: 61 IGACMAQGKKEEAEELKKKVQENADRVETLSAEEKQVEEKIKKIMMSIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D + A K++G F L G +A L A Sbjct: 121 DDSENVEIQKYGEPVVPDFEIPYHTEIMENFNGIDLESAGKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VITYARDFMI-DRGFTYCIPPFMIRSNVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + ++ LP T+ +P FR E G+ G + RG+ R HQF K E++ + R E+S Sbjct: 240 IGKFIDTMLSEDQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCRPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 T ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 TWYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + +SK F HTLN + VA R LIA LEN L DGSV IP VL+PY Sbjct: 360 GDAQARRLGIRVKGTDSK--YFAHTLNNTVVAPPRMLIAFLENNLQEDGSVRIPEVLQPY 417 Query: 417 MNNLAVIKKE 426 M + I+K+ Sbjct: 418 MGGMKKIEKK 427 >gi|148241646|ref|YP_001226803.1| seryl-tRNA synthetase [Synechococcus sp. RCC307] gi|166223304|sp|A5GRE1|SYS_SYNR3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|147849956|emb|CAK27450.1| Seryl-tRNA synthetase [Synechococcus sp. RCC307] Length = 425 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 177/430 (41%), Positives = 264/430 (61%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NPE + L +R +E + + ++ R L ++ +++A N ++G Sbjct: 1 MLDQRLLRDNPELISQQLGRRGMEVDLTKLQLIAKQERDLEEQRSNLQAEGNRTGKEVGM 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + V AL+ + + +K+Q+ +LE+EE + + L++ + +PN+P + P G Sbjct: 61 LIKGGAAPDSDEVKALREKGNRIKQQVAVLEEEEKGLEAKLREQLLALPNLPSADAPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ ++ G +P EH+++ + LGL + +R+ +++ +RF L G A LERA Sbjct: 121 SEADNVEVKRWG-EPRQGKDLEEHWQLADRLGLFETERSVRIAQSRFITLMGDGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLH S GYTEV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV L Sbjct: 180 LISFMLDLH-STKGYTEVMPPILVNSASLTGSGQLPKFAEESFRCADDDLWLTPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ E+I + LPL++ P FR EAGS GRDTRG++R HQF K EL E S Sbjct: 239 TSLHRDEVIAVEQLPLKYAAYTPCFRREAGSYGRDTRGLIRLHQFNKVELYWFCHPEKSA 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++ AE +L+ L+L YR + LCTGD+GFSA +TYDLEVWL G YREISSCSTC Sbjct: 299 EAHEQLTLDAEAVLEALELPYRRLELCTGDMGFSAARTYDLEVWLPGAGSYREISSCSTC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR R++ K + HTLNGSG+A+GR + A+LEN DGS+ +P L PY Sbjct: 359 GDFQARRSAIRFK--EGKGTQLLHTLNGSGLAIGRTMAALLENGQQPDGSIQLPAALVPY 416 Query: 417 MNNLAVIKKE 426 + + Sbjct: 417 F-GRERLTPQ 425 >gi|218283249|ref|ZP_03489310.1| hypothetical protein EUBIFOR_01899 [Eubacterium biforme DSM 3989] gi|218216004|gb|EEC89542.1| hypothetical protein EUBIFOR_01899 [Eubacterium biforme DSM 3989] Length = 453 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 136/427 (31%), Positives = 223/427 (52%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NP+ + +KK+ + P +L D++ R + +D+RA R S + Sbjct: 27 MLDMKFVRENPDIVKENIKKKFQDYKLPLVNEVLMEDKELRQTQQHADDLRANRKKISKE 86 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ + +G + +K + + + +L LE++E ++ S+ + + IPN+ + VPIG Sbjct: 87 IGKLMGQGKKEEAEEIKQQMAEIAHELTALEEKEIKLRESVTEKMMQIPNIIDDSVPIGK 146 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI E L +D D A +++G F L G +A L A Sbjct: 147 DDSENVELERFGEPVVPDFEIPYHTEIMERLSGIDLDAARRVAGNGFYYLMGDIARLHSA 206 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T V P ++R + G + M+ + +LI TSE S+ Sbjct: 207 ILNYARDFMIDKKGFTFVIPPYMIRSSVVDGVMSFAEMEGMMYKIEGEDLYLIGTSEHSM 266 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I+E K LP +T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 267 IGKFKDTILEEKDLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSM 326 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ E + LD+ R + C+GDL CK+ D+E W Q Y E+ SCS Sbjct: 327 EWFKKLYMNTVEFFRTLDIPVRTLECCSGDLADLKCKSVDVEAWSPRQKKYFEVGSCSNL 386 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + Q+RR+ R + N + + HTLN + VA R LIA LEN L DGS+ IP L+PY Sbjct: 387 TDAQARRLKIRVKGENGEKY-YAHTLNNTCVAPPRMLIAFLENNLQEDGSILIPEALQPY 445 Query: 417 MNNLAVI 423 M I Sbjct: 446 MGGKKKI 452 >gi|14521535|ref|NP_127011.1| seryl-tRNA synthetase [Pyrococcus abyssi GE5] gi|13878800|sp|Q9UZ21|SYS_PYRAB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|5458754|emb|CAB50241.1| serS seryl-tRNA synthetase [Pyrococcus abyssi GE5] Length = 455 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 162/450 (36%), Positives = 253/450 (56%), Gaps = 27/450 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ IR+NPE + LKKR + + IL LD + R +K+I +R RN + + Sbjct: 1 MLDIKLIRENPELVKNDLKKRGELEKIKWIDEILKLDAEWRAKLKEINKLRHERNKIAIE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ +G V+ L ++ + +++ LEKE E+ + + +PN+ VPIG Sbjct: 61 IGKRRKKGEP--VEELLAKSKEIVKRIESLEKEVEELKKKIDYYLWRLPNITHPSVPIGE 118 Query: 118 SANENILIRSVGKKPSAI--------------------HLSREHFEIGEALGLMDFDRAT 157 S +N+ IR GK + H ++ E LG DF RA Sbjct: 119 SEEDNVPIRFWGKARVWEGHLERFLEQSQGKMEYEVLEWRPKLHVDLLEILGGADFARAA 178 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K+SG+RF L + L+ AL +F +D + G+T V P +VR G+ F D Sbjct: 179 KVSGSRFYYLLNEIVILDLALIRFALDE-LIKKGFTPVIPPYMVRRFVEEGSTTFEDFED 237 Query: 218 DMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LIPT+E L ++++EI++ K LPL + ++P FR EAG+AG+DT+G+ Sbjct: 238 VIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGISPCFRKEAGTAGKDTKGIF 297 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E +R E+S+ HER++ AEE+ ++L++ YRVV++CTGDLG+ A K YD Sbjct: 298 RVHQFHKVEQFVYSRPEESWEWHERIIRNAEELFQKLEIPYRVVNICTGDLGYVAAKKYD 357 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E W+ GQ +RE+ S S C ++Q+RR+N R+RD + ++ HTLN + +A R ++AI Sbjct: 358 IEAWMPGQGRFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAI 417 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 LEN+ DG+V IP VL Y ++ E Sbjct: 418 LENHQEEDGTVKIPKVLWKYTGFKEIVPVE 447 >gi|297621844|ref|YP_003709981.1| Seryl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] gi|297377145|gb|ADI38975.1| Seryl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] Length = 423 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 163/426 (38%), Positives = 260/426 (61%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DI+ IR N E ++ LK++ IL LD+K R L K+E +++ RN S +IG+ Sbjct: 1 MIDIKLIRANREEIEEKLKRKEPGISLFPILELDQKIRGLKTKVEQLKSERNHVSKKIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G S A+ +E S ++ ++ E + + ++ +PN+P++++ I Sbjct: 61 MKRKGEDS--SAMMSEVSGKSAEIHAIDHELGPLEEKFRLELAKLPNLPMDDIKIHDDPA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN++I+ G+K + H E+ E L L DF R K++G+ + + G A LE AL Sbjct: 119 ENVMIKEFGEKREFDFPFKNHVELNEQLKLFDFVRGAKIAGSGWPIYRGWGARLEWALLH 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW---LIPTSEVSLT 237 +M+ ++ ++G+T+ P LVR E M+G+GQ+PKFA+ F D + LIPT+EV L Sbjct: 179 YMMSVNI-KNGFTQWMPPALVRPEVMFGSGQLPKFANQQFAIHDEEYNLFLIPTAEVPLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 L++ EI+E + LPL++ P FR EAG+AG + RG++R HQF K E+ + E+S Sbjct: 238 GLHADEILEEEELPLKYCAYTPCFRREAGAAGSNERGLIRTHQFNKVEMFCFCKPEESGK 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M++ AEEIL+ L LHYR + L TGD+ F++ +T D+EVWL GQ+ Y E+SS S C Sbjct: 298 IFDEMIANAEEILEGLGLHYRNMLLVTGDMSFASARTVDIEVWLPGQDRYYEVSSVSNCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++QSRR R+R + + HTLNGSG+A R +++++EN N+DGS+ IPTVL+PY+ Sbjct: 358 DYQSRRSQIRFRRK-GEKPELLHTLNGSGLATSRLMVSLIENNQNSDGSINIPTVLQPYL 416 Query: 418 NNLAVI 423 + V+ Sbjct: 417 DGKTVL 422 >gi|256419264|ref|YP_003119917.1| seryl-tRNA synthetase [Chitinophaga pinensis DSM 2588] gi|256034172|gb|ACU57716.1| seryl-tRNA synthetase [Chitinophaga pinensis DSM 2588] Length = 424 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 152/425 (35%), Positives = 243/425 (57%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + +IRQN + + L ++ + +L LD+K + L + ++ +A+ NSNS +I Sbjct: 1 MLQVPFIRQNKDQVLERLTLKNFRELELVDQVLELDDKRKKLTLEYDETQAKVNSNSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ +A+G ++ K+E ++LK +L + +E L + +PN+P VP G + Sbjct: 61 GKLMAQGQKDEAESRKSEVASLKARLQPINEELAATEKLLHDTLVKLPNLPSPLVPPGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN+ +R G P + H+++ + L+DF+ K++GA F V A L+RA+ Sbjct: 121 PEENVEVRKGGDIPQLHEGAVPHWDLVKKYDLIDFELGNKITGAGFPVYKNRGARLQRAM 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 Q+ ++ +T + GYTE P LV ++ YGTGQ+P M+ D +LIPT+EV LT Sbjct: 181 IQYFLNFNT-DKGYTEFQVPHLVNSDSGYGTGQLPDKEGQMYFVGEDELYLIPTAEVPLT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ EI++ LP++ T P FR EAGS G+D RG+ R HQF K E+V + E S+ Sbjct: 240 NIFRDEILKDTELPVKLTGYTPCFRREAGSYGKDVRGLNRLHQFDKVEVVQVVHPEKSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M++ EE++K L+L YR++ LC GD+GF++ TYD EV+ Q + E+SS S Sbjct: 300 ILDEMVAHVEELVKSLELPYRILRLCGGDMGFASALTYDFEVYSTAQQKWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+ R R++D + HTLNGS +A+ R L ILEN +G + IP VL+PY Sbjct: 360 SFQANRAKIRFKD-GGGKPQLVHTLNGSSLALPRILACILENNQTPEG-INIPKVLQPYF 417 Query: 418 NNLAV 422 + Sbjct: 418 GADKI 422 >gi|325663368|ref|ZP_08151818.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|331086941|ref|ZP_08336017.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470822|gb|EGC74052.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|330409602|gb|EGG89041.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 425 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 140/428 (32%), Positives = 224/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NP+ + +K + + P + +++LD +NR + +++E +RA +N S Sbjct: 1 MLDIKFLRANPDIVKQNIKNKFQDSKLPLVDEVIALDLRNREIKQEVEALRAEKNKISKM 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + K + S + + L EE EV +K ++ IPN+ VPIG Sbjct: 61 IGACMAQGKKEEAEEYKRQVSAQGDTIEKLSVEEKEVEEKIKTIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ + H EI E +D + A K++G F L G +A L A Sbjct: 121 DDSENVELERYGEPVVPDYEIPYHTEIMEKFDGIDLESAGKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCIPPFMIRSNVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +++ K+LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTMLDEKTLPRTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ M ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 KWYDVMWKNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQQKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+N R + + K F HTLN + VA R LIA LEN L ADGS+ IP L+PY Sbjct: 360 GDAQARRLNIRVKGEDGK--YFAHTLNNTVVAPPRMLIAFLENNLQADGSIKIPAALQPY 417 Query: 417 MNNLAVIK 424 M IK Sbjct: 418 MGGKTEIK 425 >gi|18977576|ref|NP_578933.1| seryl-tRNA synthetase [Pyrococcus furiosus DSM 3638] gi|30173185|sp|Q8U1K2|SYS_PYRFU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|18893291|gb|AAL81328.1| seryl-tRNA synthetase [Pyrococcus furiosus DSM 3638] Length = 455 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 163/451 (36%), Positives = 248/451 (54%), Gaps = 29/451 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ----SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLDI IR NPE + LKKR E + IL LDE+ R +K+I +R RN + Sbjct: 1 MLDINLIRNNPELVKNDLKKRG-ELDKIAWIDEILRLDEEWRKKLKEINRLRHERNKIAI 59 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +IG+ G V+ L ++ + +++ LEKE E+ + + +PN+ VP+G Sbjct: 60 EIGKRKKAG--EPVEDLLAKSKEIVKRIEELEKEVEELRKRIDYYLWRLPNITHPSVPVG 117 Query: 117 TSANENILIRSVGKKPSA--------------------IHLSREHFEIGEALGLMDFDRA 156 N+N+ IR GK + H ++ E LG DF RA Sbjct: 118 KDENDNVPIRFWGKAKVWKGHLESFLEQSQGKMEYEVLEWRPKLHVDLLEILGGADFARA 177 Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 K+SG+RF L + L+ AL +F +D E G+T V P +VR G+ F Sbjct: 178 AKVSGSRFYYLLNEIVILDLALIRFALDR-LIEKGFTPVIPPYMVRRFVEEGSTTFEDFE 236 Query: 217 DDMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 D ++ + +LIPT+E L ++++EI++ K LPL + +P FR EAG+AG+DT+G+ Sbjct: 237 DVIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVAFSPCFRKEAGTAGKDTKGI 296 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 R HQF K E +R E+S+ HER++ AEE+ + L++ YRVV++CTGDLG+ A K Y Sbjct: 297 FRVHQFHKVEQFVYSRPEESWEWHERLVRNAEELFQELEIPYRVVNICTGDLGYVAAKKY 356 Query: 336 DLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIA 395 D+E W+ GQ +RE+ S S C ++Q+RR+N R+RD + ++ HTLN + +A R ++A Sbjct: 357 DIEAWMPGQGRFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVA 416 Query: 396 ILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 ILEN+ DG+V IP L Y ++ E Sbjct: 417 ILENHQQEDGTVKIPRALWKYTGFKEIVPVE 447 >gi|331092099|ref|ZP_08340930.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] gi|330402300|gb|EGG81871.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] Length = 425 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 140/428 (32%), Positives = 222/428 (51%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NPE + +K + + P + ++ LD++NR + +++E +RA +N S + Sbjct: 1 MLDIKFLRSNPEIVKQNIKNKFQDAKLPLVDEVIELDKRNREIKQEVEALRANKNQISKK 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + K + + + L EE EV +K ++ IPN+ VPIG Sbjct: 61 IGACMAQGKKEEAEEYKRQVAQNAGRTEELSAEEKEVEEKIKTIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI + +D + A K++G F L G +A L A Sbjct: 121 DDSENVELEKFGEPVVPDFEVPYHTEIMDKFNGIDLEAAGKVAGQGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCIPPYMIRSNVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + + + LP T+ +P FR E GS G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTLNDEEKLPYTLTSYSPCFRKEKGSHGIEERGVYRIHQFEKQEMIVVCKPEESM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E+M ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWYEKMWKNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQQKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + K F HTLN + VA R LIA LEN L ADGSV IP LRPY Sbjct: 360 GDAQARRLGIRVKGKDGK--YFAHTLNNTVVAPPRMLIAFLENNLQADGSVKIPEALRPY 417 Query: 417 MNNLAVIK 424 M A I+ Sbjct: 418 MGGKAEIR 425 >gi|261368853|ref|ZP_05981736.1| serine--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282569039|gb|EFB74574.1| serine--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 435 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 138/436 (31%), Positives = 237/436 (54%), Gaps = 11/436 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + ++K+ + P + +++LD + R I + D+RA RN S Q Sbjct: 1 MLDIRFVRENPEAVKENIRKKFQDAKLPLVDEVIALDAEYRAAIGEASDLRANRNKLSKQ 60 Query: 58 IGQAIAEGNL-----SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 IG + + + + +K + + ++L LE +E E+ + +++++ IP + Sbjct: 61 IGVLMGQAKKDPAKAAEAEEVKKQVTAQADRLKELEAKETELQAKIQEIMYTIPQMIDPS 120 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VPIG + N+ ++ G+ + H +I E+ +D D A +++G F L G +A Sbjct: 121 VPIGPDDSHNVEVQRFGEPVVPDYPIPYHVDIMESFDGIDLDSAGRVAGNGFYYLLGDIA 180 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPT 231 L A+ + D + G+T V P ++ + G P+ M+ + +LI T Sbjct: 181 RLHEAVLAYARDFMI-DKGFTYVIPPFMMHGNVVKGVMSFPEMDAMMYKIEGEDLYLIGT 239 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 SE ++ + + ++ LPL T+ +P FR E G+ G + RG+ R HQF K E++ + + Sbjct: 240 SEHTMIGRFIDQTLDGAKLPLTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQEMIVVCK 299 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS ++++ + E+ + +++ R + C+GDL K+ D+E W Q Y E+ Sbjct: 300 PEDSMMWYDKLWHNSVELFRSMEIPVRQLECCSGDLADLKVKSCDIEAWSPRQQKYFEVC 359 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS G+ Q+RR++ RY+D N K + HTLN + VA R LIA LEN+L ADG+VTIP Sbjct: 360 SCSNLGDAQARRLHIRYKDENGK-PQLAHTLNNTCVAPPRMLIAFLENHLQADGTVTIPE 418 Query: 412 VLRPYMNNLAVIKKEH 427 VLRPYM A++ H Sbjct: 419 VLRPYMGGKALLVPNH 434 >gi|229828653|ref|ZP_04454722.1| hypothetical protein GCWU000342_00718 [Shuttleworthia satelles DSM 14600] gi|229793247|gb|EEP29361.1| hypothetical protein GCWU000342_00718 [Shuttleworthia satelles DSM 14600] Length = 434 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 143/431 (33%), Positives = 227/431 (52%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ +R+NPE + ++K+ E + ++ LDEK R L + +D+RARRN S Q Sbjct: 1 MIDIKLLRENPELVKENIRKKFQEHKLALVDEVIELDEKVRTLKGEGDDLRARRNELSRQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + +K + + ++L ++E+EE E+ L K + IPN+ + VPIG Sbjct: 61 IGSLMKEGKRQEAEEVKAQVTANADRLKVIEEEERELSEKLTKDMMVIPNIIDDSVPIGP 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+ I G+ + H +I EA +D D A +++G F L G +A L A Sbjct: 121 DDTCNVEIEKFGEPLVPDYPIPYHTDIMEAFDGIDMDAAGRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + D G+T V P ++ + G + M+ + +LI TSE S+ Sbjct: 181 CLSYARDFMI-NKGFTYVIPPYMIHGNVVSGVMSFDEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + + + LP +T+ +P FR E G+ G + RG+ R HQF K E++ + R E+++ Sbjct: 240 IGKFIDTLNDEEKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCRPEEAW 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ++ S E+ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 DWYNKLWSNTVELFRSMDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R +D + F TLN + VA R LIA LEN L ADGSV IP VL+PY Sbjct: 360 GDAQARRLKIRVKDKDGNKY-FATTLNNTCVAPPRMLIAFLENNLQADGSVRIPEVLQPY 418 Query: 417 MNNLAVIKKEH 427 M V+ +H Sbjct: 419 MGGTKVLLPKH 429 >gi|162456419|ref|YP_001618786.1| hypothetical protein sce8136 [Sorangium cellulosum 'So ce 56'] gi|189083589|sp|A9FM88|SYS_SORC5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|161167001|emb|CAN98306.1| serS2 [Sorangium cellulosum 'So ce 56'] Length = 433 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 196/428 (45%), Positives = 270/428 (63%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD + + ++ + + AL R + + S R I+++E +A RN+ + Sbjct: 1 MLDPRHVAEHLDEVRAALALRSPAAAASLGDDFASTVSARRSNIQELERWQAERNAANEA 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + + ++E L ++ E+ E+ + +L+S +PN+P VP+G Sbjct: 61 MARL--DKKSPEFAQKRDELKALSTRIKEAEQVVSELEKRMTELLSVVPNLPDPSVPVGA 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+++R+ G+KPS + H++IG ALGL+DF+RA KLSGARF+VL G A LERA Sbjct: 119 GEEGNVVVRAWGEKPSFSFAPKSHWDIGTALGLLDFERAAKLSGARFTVLMGAAARLERA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIP 230 L FM+DLHT E GY EV P LV+D A++GTG +PKFA+D+F T +LIP Sbjct: 179 LISFMLDLHTREQGYLEVLPPFLVKDTALFGTGNLPKFAEDLFKTQKSDPERAYDLYLIP 238 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV +TNL++ EI++ SLP+ + P FRSEAGS GRD RG++RQHQF K ELV + Sbjct: 239 TAEVPVTNLHADEILDGASLPIAYAAYTPCFRSEAGSHGRDVRGLIRQHQFDKVELVRFS 298 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 EDS +HE + S AEE+LKRL LHYRV +LCTGDLGF + KTYDLEVWL GQ +YREI Sbjct: 299 APEDSARQHELLTSHAEEVLKRLGLHYRVSALCTGDLGFGSQKTYDLEVWLPGQGVYREI 358 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS G+FQ+RR RYR + HT+NGS +AVGR +IAILE Y ADG+V +P Sbjct: 359 SSCSNFGDFQARRAQIRYRPEPKAKPRLVHTMNGSALAVGRTVIAILEQYQQADGTVVVP 418 Query: 411 TVLRPYMN 418 LR +M Sbjct: 419 EPLRAFMG 426 >gi|294630258|ref|ZP_06708818.1| seryl-tRNA synthetase [Streptomyces sp. e14] gi|292833591|gb|EFF91940.1| seryl-tRNA synthetase [Streptomyces sp. e14] Length = 425 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 148/430 (34%), Positives = 241/430 (56%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + R + + +LS DE+ R + +++RA + + I Sbjct: 1 MIDLRLLREDPDRARASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKALGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + S L + + E + ++L+ + N+ +VP+G Sbjct: 61 KASGDEKAE----LLKKASQLAADVKAADAERDAADAETQELLLQLGNLVHPDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + ++H E+G+ LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVTLETHGTIRDFDAEGFAPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L + + G+T + P LVR ++M GTG + + A D++ D +L+ TSEV+L Sbjct: 177 LVNAAMAQ-ATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLDKDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII+++ LPLR+ +P FR EAGS G+DTRG+ R HQF K E+ S E+S Sbjct: 236 AAYHMDEIIDAERLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVTPEESQ 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L ++ L L+L +RV+ + +GDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 EEHRRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKFDCEAWIPTQGKYRELTSTSDC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQSRR++ R RD K ++ TLNG+ AV R ++AILEN+ ADGSV +P VLRPY Sbjct: 356 TEFQSRRLSIRVRD--GKQVRPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKKE 426 + V++ + Sbjct: 414 LGGREVLEPQ 423 >gi|331089226|ref|ZP_08338128.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] gi|330405778|gb|EGG85307.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] Length = 429 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 141/430 (32%), Positives = 224/430 (52%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NPE + +K + + P + ++ LD +NR + +++E +RA +N +S + Sbjct: 1 MLDIKFLRSNPEIVKQNIKNKFQDEKLPLVDEVIELDLRNREIKQEVEALRAEKNKSSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+ + LK + S ++ L EE EV +KK++ IPN+ VPIG Sbjct: 61 IGAMMAQKKFEEAEVLKKKVSESAGRIEELSVEEKEVEEKIKKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI EA +D D A K++G F L G +A L A Sbjct: 121 DDSENVELERFGEPVVPDFEIPYHTEIMEAFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + + + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFINTQLTEEELPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWYEKLWKNTVDLFRSMDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + F HTLN + VA R LIA LEN L ADGSV IP VLRPY Sbjct: 360 GDAQARRLGIRVKGKDGN--YFAHTLNNTVVAPPRMLIAFLENNLQADGSVKIPEVLRPY 417 Query: 417 MNNLAVIKKE 426 M I+ + Sbjct: 418 MGGNEKIEVK 427 >gi|88807545|ref|ZP_01123057.1| seryl-tRNA synthetase [Synechococcus sp. WH 7805] gi|88788759|gb|EAR19914.1| seryl-tRNA synthetase [Synechococcus sp. WH 7805] Length = 425 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 185/430 (43%), Positives = 263/430 (61%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R+NPE + L +R L + +L ++ R L ++ ++A N ++G Sbjct: 1 MLDQRLVRENPELMARELARRGLTVDLNSLQALAQQQRDLEEQRSGLQAEGNRVGKEVGL 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G V L+ + + +K+++ +LE EE ++ + LK + PN+P + P G Sbjct: 61 KIKAGADPKGDEVAELRQQGNAIKQRVAVLEDEERQLAADLKSQLLTFPNLPSPDCPDGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+NI IR+ G P EH+ I + LGL+D +R+ +++ +RF L G A LERA Sbjct: 121 DENDNIEIRAWG-DPRRQEGLEEHWAIADRLGLLDSERSVRIAQSRFVTLFGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLHT GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV L Sbjct: 180 LINFMLDLHT-GKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCADDDLWLTPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII + LPLR+ +P FR EAGS GRDTRG++R HQF K EL + + Sbjct: 239 TSLHRDEIIPADQLPLRYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVHPDHAH 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H + + AE +L+ L+L YRV+ LCTGDLGFSA +TYDLEVWLAG YREISSCS C Sbjct: 299 EAHAAITADAEAVLQALELPYRVLELCTGDLGFSAARTYDLEVWLAGAGAYREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR + R + K+ + HTLNGSG+A+GR + A+LEN ADGSV +P L PY Sbjct: 359 GDFQARRSSIR--TKDGKATRLVHTLNGSGLAIGRTMAALLENGQQADGSVLLPQALIPY 416 Query: 417 MNNLAVIKKE 426 ++ E Sbjct: 417 F-GSDRLQPE 425 >gi|255525903|ref|ZP_05392830.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255510397|gb|EET86710.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 425 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 142/428 (33%), Positives = 224/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + +K + + + + ++ LD + R + K+ + +RA RN S Q Sbjct: 1 MLDLRFVRENPEVVKQNIKNKFQDNKLGLVDEVIELDTELRNIKKEADSLRADRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + + E L LE +E E+ +K + IPN+ VPIG Sbjct: 61 IGGLMAQGKKDEAEEMKKKVTEHSEHLAQLEAKEDELEKKIKTDMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H +I E L +D D A K++G F L G +A L A Sbjct: 121 DDSENVEVERFGEPAVPDFEVPYHTDIMEKLNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCIPPFMIRSEVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I+ +LP T+ +P FR E G+ G + RG+ R HQF K E++ + +DS Sbjct: 240 IGKFIDTILPEDTLPRTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCEPKDSP 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWKNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K F HTLN + VA R LIA LEN LN DGS+ IPTVL+PY Sbjct: 360 GDAQARRLKIRVDGKDGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSINIPTVLQPY 417 Query: 417 MNNLAVIK 424 M VIK Sbjct: 418 MGGKKVIK 425 >gi|149194939|ref|ZP_01872032.1| seryl-tRNA synthetase [Caminibacter mediatlanticus TB-2] gi|149134860|gb|EDM23343.1| seryl-tRNA synthetase [Caminibacter mediatlanticus TB-2] Length = 415 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 190/419 (45%), Positives = 269/419 (64%), Gaps = 6/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + ++ E++ L + ++ + I +L ++ + L+ KIE+++A+RN+ S +IG Sbjct: 1 MIDLKQLEKDFENISKKLSLKGIDENILKDIKNLFQQKKELLHKIEELKAKRNTLSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + I N + LK E S +KE++ LE + E+ +L K IPN+P ++VPIG Sbjct: 61 KNIKT-NPQKAEELKKEVSNIKEEISNLENKLKEIEDNLNKKALIIPNIPDDDVPIGKDE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+ VG+ P + H E+GE L +D R KL+ +RF+V+ A LERAL Sbjct: 120 NDNVEIKRVGEIPKFDFEIKSHDELGEKLDWLDSIRGVKLAKSRFTVMKKDAARLERALI 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 F +D H E+G+ EV P++V E M GTGQ+PKF +D+F +LIPT+EV LTN Sbjct: 180 NFFLD-HNREYGFEEVWVPVIVNKETMTGTGQLPKFEEDLFKIEKEGLYLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EIIE+ P++ T+ P FR EAGS G+DT+G++RQHQF K ELV+IT+ EDS Sbjct: 239 LFRDEIIENLDTPIKLTSYTPCFRKEAGSYGKDTKGIIRQHQFDKVELVAITKPEDSDKV 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M+ CA L++L+L YR V LCTGDLGFSA KT DLEVW+ QN YREISS S + Sbjct: 299 FEEMVECASSALEKLELPYRQVMLCTGDLGFSAAKTIDLEVWIPSQNKYREISSISNTRD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY+D K K HTLNGS +AVGR L+AI+ENY DG + IP VL Y+ Sbjct: 359 FQARRAKIRYKD--GKKNKLVHTLNGSSLAVGRTLVAIMENYQTKDGKIKIPKVLEKYL 415 >gi|153815410|ref|ZP_01968078.1| hypothetical protein RUMTOR_01645 [Ruminococcus torques ATCC 27756] gi|317500872|ref|ZP_07959084.1| serine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|145847269|gb|EDK24187.1| hypothetical protein RUMTOR_01645 [Ruminococcus torques ATCC 27756] gi|316897752|gb|EFV19811.1| serine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] Length = 429 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 141/430 (32%), Positives = 224/430 (52%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NPE + +K + + P + ++ LD +NR + +++E +RA +N +S + Sbjct: 1 MLDIKFLRSNPEIVKQNIKNKFQDEKLPLVDEVIELDLRNREIKQEVEALRAEKNKSSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+ + LK + S ++ L EE EV +KK++ IPN+ VPIG Sbjct: 61 IGAMMAQKKFEEAEVLKKKVSESAGRIEELSVEEKEVEEKIKKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI EA +D D A K++G F L G +A L A Sbjct: 121 DDSENVELERFGEPVVPDFEIPYHTEIMEAFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + + + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFINTQLTEEELPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWYEKLWKNTVDLFRSMDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + F HTLN + VA R LIA LEN L ADGSV IP VLRPY Sbjct: 360 GDAQARRLGIRVKGKDGS--YFAHTLNNTVVAPPRMLIAFLENNLQADGSVKIPEVLRPY 417 Query: 417 MNNLAVIKKE 426 M I+ + Sbjct: 418 MGGNEKIEVK 427 >gi|300087729|ref|YP_003758251.1| seryl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527462|gb|ADJ25930.1| seryl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 413 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 168/419 (40%), Positives = 265/419 (63%), Gaps = 13/419 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ R+NPE + A+ R + E I++ D++ +++ + ++++R ++ + S G Sbjct: 1 MLDLKLFRENPEVIKKAMNDRQAKAPIEEIITADDERKVISQSLDELRRQKKTLSKS-GP 59 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + E + ++E++ LE+ ++ LK L+ +PN+P VP GT Sbjct: 60 IVPE-----------KGRIVREKISELEERLRDIEGCLKDLLLQVPNIPQPSVPYGTGEA 108 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N++ R G+K + H+E+GE L ++DF+R K+SG+RF VL A L+R+L Sbjct: 109 DNVVRRYYGEKREFEFTPKSHWELGEQLDIIDFERGVKISGSRFYVLKNAGARLQRSLIS 168 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 +D+HT +HGY+E+ P +V+ E+++G+G +PKFAD+++ D W++PT+EV LTNL Sbjct: 169 LFLDIHTRQHGYSEMYLPFMVKQESLFGSGNLPKFADNLYRDANDDLWMVPTAEVPLTNL 228 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ S LP + FR E SAG+DTRG+ R HQF K EL T E S E Sbjct: 229 HRDEILASSELPKHYCAYTACFRREKMSAGKDTRGIKRGHQFDKVELYKFTTPESSNQEL 288 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++L+ AE I K L+L YR+V LCTGD+GF++ K+YD+E+W G + E+SSCS C +F Sbjct: 289 EKLLNDAEAIAKALELPYRIVELCTGDIGFASSKSYDIEIWAPGVGEWLEVSSCSNCLDF 348 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RR N RYR ++ +++ HTLNGSG+A+ R +IA+LENY +DGS+TIP L+PYM Sbjct: 349 QARRANIRYRREDNNKVEYVHTLNGSGLALPRVVIAVLENYQESDGSITIPAALKPYMG 407 >gi|317967929|ref|ZP_07969319.1| seryl-tRNA synthetase [Synechococcus sp. CB0205] Length = 426 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 175/426 (41%), Positives = 261/426 (61%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NPE + L +R ++ + + + R L +K +++A N ++G Sbjct: 1 MLDQRLLRDNPELITEQLGRRGMKLDLTGLQLMARQERDLEEKRSNLQAEGNRIGKEVGL 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G V AL++E + +K+Q+ +LE++E + + L++ + +PN+P E P G Sbjct: 61 KIKGGAAPGSPEVQALRDEGNRIKQQVAVLEEQEKTLEAKLREELLTLPNLPSAEAPDGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+N+ I++ G + EH++I E LGL + +R+ +++ +RF L G A LER+ Sbjct: 121 DENDNVEIKTWGSPRAKEDWLEEHWQIAERLGLFETERSVRIAQSRFVTLMGLGARLERS 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLH GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 181 LINFMLDLH-GGKGYREVLPPILVNSASLTGSGQLPKFAEESFRCAEDDLWLTPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ E+I + LPL++ P FR EAGS GRDTRG++R HQF K EL E S Sbjct: 240 TSLHRGEVIPADQLPLKYVAYTPCFRREAGSYGRDTRGLIRLHQFNKVELYWFCHPEHSA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++ + AE +L+ L+L YR + LCTGD+GFSA +TYDLEVWL G YREISSCS C Sbjct: 300 DAHQQITADAEAVLEALELPYRKIELCTGDMGFSATRTYDLEVWLPGAGAYREISSCSVC 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR R + K+ + HTLNGSG+AVGR + A+LEN DGS+ +P L PY Sbjct: 360 GDFQARRSAIRCK--EGKTTQLLHTLNGSGLAVGRTMAALLENGQQIDGSIKLPAALVPY 417 Query: 417 MNNLAV 422 + + Sbjct: 418 FGSDTI 423 >gi|253581104|ref|ZP_04858364.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847640|gb|EES75610.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 430 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 142/431 (32%), Positives = 223/431 (51%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + ++ + + + +L LD++NR + +++E +RA RN S Q Sbjct: 1 MLDIKFVRENPEVVKQNIRNKFQDNKLELVDKVLELDKENREIKQEVEALRAERNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + + ++ L E EV L K + IPN+ VPIG Sbjct: 61 IGALMAQGKKEEAEEVKKQVAASGTRIEELSTREKEVEEELLKDMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H EI E +D D A +++G F L G +A L A Sbjct: 121 DDSENVEIEKFGEPVVPDFEVPYHTEIMENFDGIDLDSARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +II + LP T+ +P FR E G+ G + RG+ R HQF K E++ + R E+S Sbjct: 240 IGKFIDQIIPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCRPEESP 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSLDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K HTLN + VA R LIA LEN LN DGSV+IP L+PY Sbjct: 360 GDAQARRLKIRVNGKDGKKY-LAHTLNNTVVAPPRMLIAFLENNLNEDGSVSIPKALQPY 418 Query: 417 MNNLAVIKKEH 427 M + I+K+H Sbjct: 419 MGGMTKIEKKH 429 >gi|212695810|ref|ZP_03303938.1| hypothetical protein ANHYDRO_00343 [Anaerococcus hydrogenalis DSM 7454] gi|212677185|gb|EEB36792.1| hypothetical protein ANHYDRO_00343 [Anaerococcus hydrogenalis DSM 7454] Length = 429 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 139/431 (32%), Positives = 224/431 (51%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + +KK+ + + ++ LD+K R + + +++RA+RN S Q Sbjct: 1 MLDIKFVRENPELVKENIKKKFQDEKLVLVDEVIELDQKLRDVKTEGDNLRAKRNKTSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K E + ++L +E++ + LK+ + IP + + VPIG Sbjct: 61 IGALMGQGKKDEAEEVKKEVGDINDRLVQIEEDTRKFQDQLKEKMQVIPQMIDDSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ + + H +I E+ +D D A SGA F L G +A L A Sbjct: 121 DDSENVEIERFGENVTPDYEVPYHVDIMESFNGIDLDSARDTSGAGFYYLKGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + GY P ++R + + G + D M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DKGYEYHIPPFMIRSDVVTGVMSFAEMEDMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + I E +PL+ T+ +P FR E G+ G + RG+ R HQF K E+V I + EDS Sbjct: 240 IGKFINSINEESDMPLKMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ + E + L++ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 KFYDELWQNTVEFFRSLEIPVRTLECCSGDLADLKVKSCDVEAWSPRQGKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R F HTLN + VA R LIA LEN L DGSV IP L+ Y Sbjct: 360 GDAQARRLKIRLRGEKGN--YFAHTLNNTVVAPPRMLIAFLENLLQEDGSVKIPQPLQMY 417 Query: 417 MNNLAVIKKEH 427 M + + ++ Sbjct: 418 MGGMEKLVPKN 428 >gi|332665948|ref|YP_004448736.1| seryl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] gi|332334762|gb|AEE51863.1| seryl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] Length = 425 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 158/423 (37%), Positives = 238/423 (56%), Gaps = 8/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ----SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 ML + +IR N E + LKKR+ + E IL LDE + L +++D+ A RN S Sbjct: 1 MLQVNFIRNNKERVLAGLKKRNAKEDLFQTVESILELDELRKRLKTELDDLNAERNRFST 60 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +IG + +G + +++ LKE+ ++E++ L +L+ +PN+P E VP+G Sbjct: 61 EIGALMKQGKKEEAEQFRSQVVGLKERSAVIEEDLKSSEGQLTELLYLVPNIPHESVPVG 120 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +N + R G +P + H+E+ + D + KL+GA F V G A LER Sbjct: 121 ITPEDNEIFRP-GPEPELGESALPHWELAAKYKVFDLELGVKLTGAGFPVYRGKGAKLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL F +D S GY E+ PL+V +++ GTGQ+P M+ T D +LIPT+EV Sbjct: 180 ALINFFLDE-ASAAGYEEIIPPLMVNEDSARGTGQLPDKEAQMYHVTLDNLYLIPTAEVP 238 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TN+Y EI+++ +LP++ T P FR EAGS G RG+ R HQF K E+V I + S Sbjct: 239 VTNIYRDEILDAAALPIKMTAYTPCFRREAGSYGAHVRGLNRVHQFDKIEIVQIVHPDKS 298 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + ML +L +L L +R++ LC GD+GF++ T+D EVW A Q + E+SS S Sbjct: 299 YDTLMEMLEHVAGLLNKLGLPFRILRLCGGDMGFTSALTFDFEVWSAAQKRWLEVSSVSN 358 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 FQS RM R+R+ K ++ HTLNGS +A+ R + +ILEN +G + IP VLR Sbjct: 359 FETFQSNRMKMRFREGRDKDIQLVHTLNGSALALARIVASILENNQTPEG-IVIPEVLRK 417 Query: 416 YMN 418 Y Sbjct: 418 YTG 420 >gi|113953126|ref|YP_731293.1| seryl-tRNA synthetase [Synechococcus sp. CC9311] gi|123327682|sp|Q0I8C9|SYS_SYNS3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|113880477|gb|ABI45435.1| seryl-tRNA synthetase [Synechococcus sp. CC9311] Length = 425 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 185/430 (43%), Positives = 263/430 (61%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NPE + L +R ++ + + + R L ++ ++A N ++GQ Sbjct: 1 MLDQRLLRDNPELISRELGRRGMDVDLTGLQLIAKLQRDLEERRSGLQAEGNRIGKEVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + V L+ + + +K+++ ILE EE ++ + L++ + PN+P E P G Sbjct: 61 RIQAGADPKGAEVAELRLQGNQIKQKVAILEDEEKQLTAQLREELLSYPNLPSEACPDGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S ++N +R G P +EH++I E L L+D +R+ +++ +RF L G A LERA Sbjct: 121 SEDDNKEVRRWG-DPRVEDGLKEHWQIAEQLSLLDTERSVRIAQSRFVTLFGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLHT GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV L Sbjct: 180 LINFMLDLHT-GKGYREVLPPVLVNSASLTGSGQLPKFAEESFRCADDDLWLTPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII S LPLR+ +P FR EAGS GRDTRG++R HQF K EL E S Sbjct: 239 TSLHRDEIIPSDQLPLRYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVHPEHSE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE + + AE +L+ L+L YRV+ LCTGDLGFSA +TYDLEVWLAG YREISSCS C Sbjct: 299 EAHELITADAEAVLQALELPYRVLELCTGDLGFSAARTYDLEVWLAGAGAYREISSCSVC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + R + K+ + HTLNGSG+A+GR + A+LEN DGSV +P L PY Sbjct: 359 SDFQARRSSIR--TKDGKTTRLVHTLNGSGLAIGRTMAALLENGQQPDGSVKLPQALVPY 416 Query: 417 MNNLAVIKKE 426 ++ E Sbjct: 417 F-GCDRLQPE 425 >gi|226947753|ref|YP_002802844.1| serine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] gi|226844320|gb|ACO86986.1| serine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 425 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 225/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++K+ + +++LD + R + + +++RA+RN S Q Sbjct: 1 MLDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRDIKPEADNLRAKRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + + + L LEK E E+ +KK++ IPN+ VPIG Sbjct: 61 IGGLMAQGKKGEAEELKKQVTAASDHLAELEKGESELEEKIKKIMITIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIQRYGEPVVPDFEVPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSEVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I SLP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSV 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N K F HTLN + VA R LIA LEN LNADGSV IP L+PY Sbjct: 360 GDAQARRLKIRVAGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNADGSVNIPVPLQPY 417 Query: 417 MNNLAVIK 424 M + +IK Sbjct: 418 MGGMTIIK 425 >gi|320009684|gb|ADW04534.1| seryl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331] Length = 425 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 148/429 (34%), Positives = 238/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE R + +++R+ + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVALVDALLSADELRRSSGVRFDELRSEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A L + LK + + + E + K+L+ + N+ E+VP+G Sbjct: 61 KA----TPEERAELLKKADQLKAGVKAADAAQDEADAEAKRLLLQLGNIVHEDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + ++H E+GEALG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVVLETHGTIRDFGAEGFEPKDHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+ + P LVR AM GTG + + A++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFVPMITPALVRPRAMEGTGFLGQAAENVYHLEKDDYYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII++ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S D+ Sbjct: 236 AAYHMDEIIDADKLPLRYAGYSPCFRREAGTYGKDTRGIFRVHQFEKVEMFSYVDPTDAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L ++ L L+L ++V+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHRRLLDWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R RD K ++ TLNG+ AV R ++AILEN+ DGSV +P LRPY Sbjct: 356 DGFQARRLSVRMRD--GKKVQPLATLNGTLCAVPRTIVAILENHQLPDGSVRVPEALRPY 413 Query: 417 MNNLAVIKK 425 + +++ Sbjct: 414 LGGRELLEP 422 >gi|315230878|ref|YP_004071314.1| seryl-tRNA synthetase [Thermococcus barophilus MP] gi|315183906|gb|ADT84091.1| seryl-tRNA synthetase [Thermococcus barophilus MP] Length = 455 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 165/450 (36%), Positives = 251/450 (55%), Gaps = 27/450 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ IR+NP+ + L KR + + IL LD+K R ++KI +R RN + + Sbjct: 1 MLDIKLIRENPDIVKGDLIKRGELEKLKWIDEILELDKKWRENLRKINQLRRERNRIAVE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ G VD L ++ + +Q+ ILEKE E+ + + +PN+ E VPIG Sbjct: 61 IGKRKKAG--ESVDDLLTKSKEIVKQIEILEKENEEIRKKIDFYLWRLPNITHESVPIGK 118 Query: 118 SANENILIRSVGKKPSA--------------------IHLSREHFEIGEALGLMDFDRAT 157 EN+ I+ GK + H ++ E L DF+RA Sbjct: 119 DDTENVPIKFWGKARVWKGHLESFLEQSQGKMEYEVLEWKPKLHVDLLEILRGADFERAA 178 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K+SG+RF L + L+ AL +F +D E G+T V P +VR G F + Sbjct: 179 KVSGSRFYYLLNEIVILDLALIRFALDR-LIEKGFTPVIPPYMVRRYVEEGVTTFDDFEN 237 Query: 218 DMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LIPT+E L ++++EII+ K LPL + ++P FR EAG+AG+DT+G+ Sbjct: 238 VIYKVEGEDLYLIPTAEHPLAGMHANEIIDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIF 297 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E +R E+S+ HE++L AEE+ + L++ YRVV++CTGDLG+ A K YD Sbjct: 298 RVHQFHKVEQFVYSRPEESWEWHEKLLQNAEELFQELEIPYRVVNICTGDLGYVAAKKYD 357 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E W+ GQ +RE+ SCS C ++Q+RR+N R+RD + KF HTLN + +A R ++AI Sbjct: 358 IEAWMPGQGKFREVVSCSNCTDWQARRLNIRFRDKTHEKPKFVHTLNSTAIATSRAIVAI 417 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 LEN+ DG+V IP L Y ++ + Sbjct: 418 LENFQEEDGTVRIPKALWKYTGFKEIVPAD 447 >gi|260437674|ref|ZP_05791490.1| serine--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292809900|gb|EFF69105.1| serine--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 428 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 139/430 (32%), Positives = 229/430 (53%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NP+ + +KK+ + P + ++ LDE+ R + ++ + +RA RN S Q Sbjct: 1 MLDIKFVRENPDIVKENIKKKFQDHKIPMVDEVIKLDEEARKVQQEADSLRADRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + +L LE++E E+ + +KK++ IPN+ VPIG Sbjct: 61 IGALMGQGKKEEAEEVKKQVGLNSARLAELEEKETELQAKVKKIMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + EN+ ++ G+ H EI E+ +D D A +++G F L G +A L A Sbjct: 121 NDQENVEVQRYGEPVVPDFEIPYHTEIMESFNGIDLDSARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSDVVTGVMSFDEMEAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + ++E K+LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDNVLEEKNLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRTLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + Q+RR+ R + + + HTLN + VA R LIA LEN LNADGSV IP L+PY Sbjct: 360 SDAQARRLGIRVKAEDGSKY-YAHTLNNTVVAPPRMLIAFLENNLNADGSVNIPEALQPY 418 Query: 417 MNNLAVIKKE 426 M + I K+ Sbjct: 419 MGGMTKIVKK 428 >gi|118486579|gb|ABK95128.1| unknown [Populus trichocarpa] Length = 523 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 142/439 (32%), Positives = 226/439 (51%), Gaps = 19/439 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N + + + +K R+ E +L L EK + K++E +RA RN+ + + Sbjct: 88 IDFKWIRDNKDAVALNIKNRNSNANLELVLELYEKMLAVQKEVERLRAERNAVA---NKM 144 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + +S L E LKE L LE++ ++ L+ CIPN+ VPIG + Sbjct: 145 KGKLEISERQKLIEEGKNLKEGLATLEEDLVKLTDELQLEAQCIPNLTHPLVPIGGEDSS 204 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + G ++H ++G+ L L DFD A ++SG++F L LE AL + Sbjct: 205 TVRKMA-GTPRDFGFPVKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVMLEMALVNW 263 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 + + G+T ++ P LVR + G P+ + + LI T+E+ + + Sbjct: 264 TLSE-VMKKGFTPLTTPELVRSSVVEKCGFQPRGDNTQVYSIEGSDQCLIGTAEIPVGGI 322 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+ LPL++ + FR+EAG+AG TRG+ R HQF K E+ + R E+S + H Sbjct: 323 HMDTILAETQLPLKYVAYSHCFRTEAGAAGTATRGLYRVHQFTKVEMFVLCRPEESDSYH 382 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E ++ E++ L LHY+ + + +GDLG A + +D+E W+ G Y EISS S C ++ Sbjct: 383 EELIKIEEDLFSALGLHYKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEISSASNCIDY 442 Query: 360 QSRRMNSRYR--------DPNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 QSRR+ RYR K +F HTLN + AV R ++ +LENY DGSV Sbjct: 443 QSRRLGIRYRPSEPTPAPPKKGKGSLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSV 502 Query: 408 TIPTVLRPYMNNLAVIKKE 426 IP LR +M L +I + Sbjct: 503 IIPGPLRAFMGGLELITPK 521 >gi|153940879|ref|YP_001389876.1| seryl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|152936775|gb|ABS42273.1| serine--tRNA ligase [Clostridium botulinum F str. Langeland] gi|295317959|gb|ADF98336.1| serine--tRNA ligase [Clostridium botulinum F str. 230613] Length = 425 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 145/428 (33%), Positives = 223/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++K+ + +++LD + R + + +++RA+RN S Q Sbjct: 1 MLDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRNIKPEADNLRAKRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + + + L LEK E E+ +KK++ IPN+ VPIG Sbjct: 61 IGGLMAQGKKGEAEELKKQVTVASDHLAELEKRESELEEKIKKIMITIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIQRYGEPVVPDFEVPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSEVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I SLP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSV 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 IWYDKLWQNTVDFFRSFDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N K F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 GDAQARRLKIRVAGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPVPLQPY 417 Query: 417 MNNLAVIK 424 M + VIK Sbjct: 418 MGGMTVIK 425 >gi|291558328|emb|CBL35445.1| seryl-tRNA synthetase [Eubacterium siraeum V10Sc8a] Length = 431 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 142/431 (32%), Positives = 223/431 (51%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+++R+NPE + +KK+ + ++ LD++ R K +++R RN S Q Sbjct: 1 MIDIKFLRENPEAVKENIKKKFQDEKIVLVNEVIELDKELRAAQLKADNLRGDRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + ++L LEK+E E+ +KK + IPN+ VPIG Sbjct: 61 IGGLMAQGKKDEAEQIKAQVKQFSDELEELEKKEEELGEEVKKRMMIIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A +++G F L G +A L A Sbjct: 121 DDSENVEIKRYGEPVVPDFEVPYHSEIMERFNGIDLDSARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VLAYARDFMI-DRGFTYCIPPYMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I E + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTINEEEKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + +D+ R + C+GDL K+YD+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSMDIPVRTIECCSGDLADLKVKSYDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + K F HTLN + VA R LIA LEN L ADGSV IP VLR Y Sbjct: 360 GDAQARRLKIRVKSKD-KGNYFAHTLNNTVVAPPRMLIAFLENNLCADGSVKIPEVLRKY 418 Query: 417 MNNLAVIKKEH 427 M + I + Sbjct: 419 MGGIDRIVPKD 429 >gi|160893423|ref|ZP_02074208.1| hypothetical protein CLOL250_00973 [Clostridium sp. L2-50] gi|156864818|gb|EDO58249.1| hypothetical protein CLOL250_00973 [Clostridium sp. L2-50] Length = 427 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 139/428 (32%), Positives = 225/428 (52%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+++R+NP+ + +K + + P + ++ LD + R ++ +D+RA RN S Q Sbjct: 1 MIDIKFLRENPDVVKQNIKNKFQDSKLPLVDEVIELDAQARATQQEADDLRANRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + + E+L L++ E E+ + +K+++ IPN+ VPIG Sbjct: 61 IGALMAQGKKEEAEEIKKQVTEQAERLSELQENETELQAKVKEIMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H EI E L +D D A +++G F L G +A L A Sbjct: 121 DDSENVEIERFGEPVVPDFEIPYHSEIMEHLHGLDLDSARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +II + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDQIIPEEELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSLDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + K HTLN + VA R LIA LEN L DGSV IP VLRPY Sbjct: 360 GDAQARRLQIRVKGEDGKKY-LAHTLNNTVVAPPRMLIAFLENNLQEDGSVRIPEVLRPY 418 Query: 417 MNNLAVIK 424 M I+ Sbjct: 419 MGGKDKIE 426 >gi|331083503|ref|ZP_08332615.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] gi|330404196|gb|EGG83744.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] Length = 428 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 138/429 (32%), Positives = 222/429 (51%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + ++ + + P + ++ LD++NR + +++E +RA RN S Sbjct: 1 MLDIRFLRENPEVVKQNIRNKFQDNKLPMVDEVIELDKRNREIKQEVEALRAERNKISKM 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + K + + E + L EE EV +K ++ IPN+ VPIG Sbjct: 61 IGGLMKEGKREEAEEAKKQVTANAETVERLSAEEKEVEEKIKTIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ + H +I E+ +D D A K++G F L G +A L A Sbjct: 121 DDSENVEVQKYGEPVVPDYEIPYHADIMESFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSDVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + II + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTIIPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESP 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K HTLN + VA R LIA LEN L ADGSV+IP LR Y Sbjct: 360 GDAQARRLKIRVNGKDEK--YLAHTLNNTVVAPPRMLIAFLENNLQADGSVSIPEALRSY 417 Query: 417 MNNLAVIKK 425 M ++ I Sbjct: 418 MGGMSAITP 426 >gi|293400049|ref|ZP_06644195.1| serine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306449|gb|EFE47692.1| serine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 428 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 138/430 (32%), Positives = 234/430 (54%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+N + + +KK+ E + ++ +D+ NR L ++ +D+RA+RN+ S + Sbjct: 1 MLDMKFLRENVDSVKENMKKKFQEHKLELVDKVVEMDKVNRQLKQRGDDLRAKRNAMSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G +A+K + + +++ +E++E ++ + +K+++ IPN+ VPIG Sbjct: 61 IGGLMAKGLKDEANAVKAKVQAMADEMKEIEEKEAKMAAEIKEIMMKIPNMIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVELQKYGEPIVPAFEIPYHTEIMERFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D E G+T V P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-ERGFTYVVPPFMIRSNVVTGVMSFAEMEGMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I++ K LP +T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTILDEKDLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ + ++ + LD+ R + C+GDL CK+ D+E W Q Y E+ SCS Sbjct: 300 DWFVKLYTNTVDLFRSLDIPVRTLECCSGDLADLKCKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + Q+RR+ R + + K F HTLN + VA R LIA LEN LN DGSV IP VL+PY Sbjct: 360 TDAQARRLGIRVKGKDGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPKVLQPY 417 Query: 417 MNNLAVIKKE 426 M + + Sbjct: 418 MGGTEKLVPK 427 >gi|224541629|ref|ZP_03682168.1| hypothetical protein CATMIT_00801 [Catenibacterium mitsuokai DSM 15897] gi|224525467|gb|EEF94572.1| hypothetical protein CATMIT_00801 [Catenibacterium mitsuokai DSM 15897] Length = 428 Score = 376 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 136/430 (31%), Positives = 220/430 (51%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI +R++PE + +KK+ + P + L LD++ R I + ++R+ RN S + Sbjct: 1 MIDIARLREDPEAVRENIKKKFQDHKLPLVDEALELDKQYRAAITRASELRSMRNKLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG K + + E+L LE+ E E L++++ IPN VPIG Sbjct: 61 IGQFMREGKKEEAAENKKKVGEMAEELKSLEEVEKESGDKLREVMMKIPNFLDPTVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G + H +I E+ +D D A +++G F L G +A L A Sbjct: 121 DDSENVEITKYGDPVVPDYEVPYHTDIMESFDGIDLDAAGRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VLAYARDFMI-NRGFTYCVPPYMIRSNVVNGVMSFEEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + E+++ LP +T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIGELLDEDKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ + ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWNNTVDLFRSLDIPVRTLECCSGDLADLKSKSLDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + Q+RR+N R + K + HTLN + VA R LIA LEN LN DG+V+IP LRPY Sbjct: 360 TDAQARRLNIRINGKDGK--YYAHTLNNTVVAPPRMLIAFLENNLNEDGTVSIPKALRPY 417 Query: 417 MNNLAVIKKE 426 M + + Sbjct: 418 MGGTEKLVPK 427 >gi|260588834|ref|ZP_05854747.1| serine--tRNA ligase [Blautia hansenii DSM 20583] gi|260540613|gb|EEX21182.1| serine--tRNA ligase [Blautia hansenii DSM 20583] Length = 428 Score = 376 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 138/429 (32%), Positives = 221/429 (51%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + ++ + + P + ++ LD++NR + +++E +RA RN S Sbjct: 1 MLDIRFLRENPEVVKQNIRNKFQDNKLPMVDEVIELDKRNREIKQEVEALRAERNKISKM 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + K + + E + L EE EV +K ++ IPN+ VPIG Sbjct: 61 IGGLMKEGKREEAEEAKKQVTANAETVERLSAEEKEVEEKIKTIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ + H +I E+ +D D A K++G F L G +A L A Sbjct: 121 DDSENVEVQKYGEPVVPDYEIPYHADIMESFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSDVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + II + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTIIPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESP 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R K HTLN + VA R LIA LEN L ADGSV+IP LR Y Sbjct: 360 GDAQARRLKIRVNGKGEK--YLAHTLNNTVVAPPRMLIAFLENNLQADGSVSIPEALRSY 417 Query: 417 MNNLAVIKK 425 M ++ I Sbjct: 418 MGGMSAITP 426 >gi|332519199|ref|ZP_08395666.1| seryl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] gi|332045047|gb|EGI81240.1| seryl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] Length = 423 Score = 376 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 159/421 (37%), Positives = 234/421 (55%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + +IR N E + L KRH + + E ++ LDE+ R L K+++ A N S +I Sbjct: 1 MLQVPFIRDNKETVIAGLAKRHFDAKDLVEQVIVLDEERRTLQSKLDNTLAESNVISKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G +ALK +TS LKE L ++ + L+ L+ +PNVP E VP G S Sbjct: 61 GILYKSGQGEKANALKEKTSALKESSKTLTEDLNTTAEKLQNLLYQLPNVPHESVPAGKS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN I + G+ P ++ H+E+ + ++DF+ K+SGA F V G A L+RAL Sbjct: 121 EEENEEIFNEGEVPKLFDGAQPHWELAKKYDIIDFELGNKISGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T GYTE P LV + + YGTGQ+P M+ D +LIPT+EV T Sbjct: 181 ISYFLDKNT-AAGYTEYQLPHLVNEASCYGTGQLPDKEGQMYHDSRDDLYLIPTAEVPGT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++ LP+ T P FR EAGS G RG+ R HQF K E++ + E+S+ Sbjct: 240 NVFRDVLLNESDLPIGITGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIIRVEHPENSYN 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 M+ + IL+ L L YR++ LC GD GF + TYD EV+ Q+ + EISS S Sbjct: 300 AFFGMVEHIKSILRELKLPYRILKLCGGDTGFPSAMTYDFEVFSTAQDRWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +Q+ R+ R+++ + K+ + HTLNGS +A+ R L ILENY +G ++IP VL PY Sbjct: 360 TYQANRLKLRFKNSDGKN-ELAHTLNGSSLALPRVLAGILENYQTENG-ISIPDVLVPYT 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|238917966|ref|YP_002931483.1| seryl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|238873326|gb|ACR73036.1| seryl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 429 Score = 376 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 136/429 (31%), Positives = 217/429 (50%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NP+ + +K + + P + ++ LD K R + +++RA RN S Q Sbjct: 1 MLDLKFVRENPDIVKQNIKNKFQDRKLPLVDEVIELDAKARATQTEADELRANRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G +A+K + S +L LE +E E+ + K++ IPN+ VPIG Sbjct: 61 IGALMAQGKKEEAEAVKAQVSADAAKLAELEADEKELNEKITKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H +I E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIEKFGEPVVPDFEVPYHTDIMERFNGIDMDAAGKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 IISYARDFMI-DRGFTYCIPPYMIRSNVVTGVMSFDEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTITPEEELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ + + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWKNTVDFFRTMDIPVRTLECCSGDLADLKVKSIDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + K+ F HTLN + VA R LIA LEN L ADG V IP LR Y Sbjct: 360 GDAQARRLKIRVQGKD-KNKYFAHTLNNTCVAPPRMLIAFLENNLQADGRVLIPEALRMY 418 Query: 417 MNNLAVIKK 425 M + Sbjct: 419 MGGKTELVP 427 >gi|294668779|ref|ZP_06733872.1| serine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309296|gb|EFE50539.1| serine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 384 Score = 376 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 185/385 (48%), Positives = 250/385 (64%), Gaps = 9/385 (2%) Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 ++A RNS S +IG +G + N + +K L E V + L+ +S IP Sbjct: 1 MQAERNSESKKIGMLKGQGKHEEAEQAMNAVAQIKTGLEQAAAELEAVQAELEAWLSAIP 60 Query: 107 NVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 N+P E VP G EN+ +R VG + ++H ++G LG +DF+ LSG+RF+V Sbjct: 61 NLPHESVPAGKDETENVEVRRVGTPRTFDFDIKDHVDLGAPLG-LDFEGGAALSGSRFTV 119 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-- 224 + G +A L RAL QFM+D HT +H YTE P +V D +YGTGQ+PKF +D+F T Sbjct: 120 MKGQIARLHRALAQFMLDTHTQQHDYTEHYTPYIVNDSTLYGTGQLPKFGEDLFHVTRGG 179 Query: 225 -----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 ++LIPT+EV+LTN I+ S+ LPL+ T +P FRSEAGS G+D RG++RQH Sbjct: 180 DESKTTQYLIPTAEVTLTNTVRDSIVPSEKLPLKLTAHSPCFRSEAGSHGKDVRGLIRQH 239 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E+V I R E S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEV Sbjct: 240 QFDKVEMVQIVRPETSYDALEEMVGHAENILKALELPYRVITLCTGDMGFGAAKTYDLEV 299 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ QN YREISSCS C +FQ+RRM +R++D N K+ + HTLNGSG+AVGR L+A+LEN Sbjct: 300 WVPAQNTYREISSCSNCEDFQARRMKARFKDENGKN-RLVHTLNGSGLAVGRTLVAVLEN 358 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIK 424 + NADGS+ IP LRPY+ L ++ Sbjct: 359 HQNADGSINIPAALRPYLGGLEKLE 383 >gi|148284580|ref|YP_001248670.1| seryl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] gi|166222756|sp|A5CDU5|SYS_ORITB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|146740019|emb|CAM80103.1| seryl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] Length = 429 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 198/425 (46%), Positives = 274/425 (64%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR NP+ LD +L KR ++ S+ I+ +D + R LI I+ ++ R S + Sbjct: 1 MLDIKWIRANPDKLDESLSKRGIDSVSKSIIHIDSEKRTLISLIQKLQHERKEKSNSVAH 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 I + + + + ++N+ + +++ LE L +++ +PN+ ++VP + + Sbjct: 61 -IYDKSSTDFEEIQNDVKLINQKITELETSLLHHEKRLSEIMDNLPNLVADDVP-YGTNS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + + I + H+EIG+ LG++DF+ ATK+SG+RF +L LA LERAL Sbjct: 119 DMNKVLKECGTIQNIKFPKHHYEIGKNLGMIDFNTATKMSGSRFVILKHDLAKLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT+E + EVS P LV+D AMY GQ+PKFAD F TT G LIPT+EV LTN++ Sbjct: 179 FMIDVHTTEFNFFEVSPPCLVKDHAMYNVGQLPKFADASFETTTGYRLIPTAEVPLTNIF 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++ + + LP+R P FRSE GSAG+D +GMLR HQF K EL +I E+S E E Sbjct: 239 ANTTLLEEKLPIRLVAFTPCFRSEVGSAGKDVKGMLRMHQFGKVELFTIATPEESNREFE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + AE ILK+L L YRVV LC+GD+GF+A KTYDLEVWL QN YREISSCS +FQ Sbjct: 299 YLTTAAETILKKLCLPYRVVLLCSGDIGFAAHKTYDLEVWLPAQNCYREISSCSHFSSFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR S+YR+ SK + F HT+NGSG+AVGR +IAILENY N DGSVTIP LR YM Sbjct: 359 ARRSLSKYRELCSKKVNFLHTINGSGLAVGRTIIAILENYQNPDGSVTIPEKLRNYMGGQ 418 Query: 421 AVIKK 425 +I Sbjct: 419 KLITP 423 >gi|329943234|ref|ZP_08292008.1| seryl-tRNA synthetase [Chlamydophila psittaci Cal10] gi|332287813|ref|YP_004422714.1| seryl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|313848385|emb|CBY17389.1| seryl-tRNA synthetase [Chlamydophila psittaci RD1] gi|325506521|gb|ADZ18159.1| seryl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|328814781|gb|EGF84771.1| seryl-tRNA synthetase [Chlamydophila psittaci Cal10] gi|328915073|gb|AEB55906.1| seryl-tRNA synthetase [Chlamydophila psittaci 6BC] Length = 426 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 164/429 (38%), Positives = 242/429 (56%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ PE + L+K+ + IL LD++ R L + E ++++R S QI + Sbjct: 1 MLDIKLIRKAPEECEARLRKKDPLISLQPILDLDKEVRNLKTQTEALQSQRKLLSNQIHK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G +L + + + L LE + S+L+ L+ +PN P E+VP+ Sbjct: 61 AKAQG--EDASSLIDSVEKIAQDLANLEPLLEQKESTLQDLLVRLPNYPDEDVPVCPDKT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+ VG P+ + H E+ + L ++DF K SG+ + LE AL Sbjct: 119 GNQVIKQVGSLPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVCLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 ++++ EHG+ PLLV+ + ++G+GQIPKF + +LIPT+EV L Sbjct: 179 YLLNKQ-REHGFQLWLPPLLVKHDILFGSGQIPKFDGQYYRVEDGDQSLYLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +S EI K LP+ + P FR EAG+AG RG++R HQF K E+ + T + + Sbjct: 238 GFHSQEIFSEKDLPIYYAAFTPCFRREAGAAGAHERGLVRVHQFHKVEMFAFTTPDQADQ 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +++MLS E+IL L L YR+ L TGD+ F+A KT D EVWL GQ Y E+SS S C Sbjct: 298 AYDKMLSVVEDILTELKLPYRLSLLSTGDMSFTASKTIDAEVWLPGQQSYYEVSSISQCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQS R +RY+D + K + F HTLNGSG+A R +AILEN DGSV IP VLRPY+ Sbjct: 358 DFQSHRSETRYKDNHGK-MHFVHTLNGSGLATPRLFVAILENNQQEDGSVIIPEVLRPYL 416 Query: 418 NNLAVIKKE 426 N ++ + Sbjct: 417 GNQEILLPQ 425 >gi|224063277|ref|XP_002301073.1| predicted protein [Populus trichocarpa] gi|222842799|gb|EEE80346.1| predicted protein [Populus trichocarpa] Length = 523 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 143/439 (32%), Positives = 226/439 (51%), Gaps = 19/439 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N + + + +K R+ E +L L EK + K++E +RA RN+ + + Sbjct: 88 IDFKWIRDNKDAVALNIKNRNSNANLELVLELYEKMLAVQKEVERLRAERNAVA---NKM 144 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + +S L E LKE L LE++ ++ L+ CIPN+ VPIG + Sbjct: 145 KGKVEISERQKLIEEGKNLKEGLATLEEDLVKLTDELQLEAQCIPNLTHPLVPIGGEDSS 204 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + G R+H ++G+ L L DFD A ++SG++F L LE AL + Sbjct: 205 TVRKMA-GTPRDFGFPVRDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVMLEMALVNW 263 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 + + G+T ++ P LVR + G P+ + + LI T+E+ + + Sbjct: 264 TLSE-VMKKGFTPLTTPELVRSSVVEKCGFQPRGDNTQVYSIEGSDQCLIGTAEIPVGGI 322 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+ LPL++ + FR+EAG+AG TRG+ R HQF K E+ + R E+S + H Sbjct: 323 HMDAILAETQLPLKYVAYSHCFRTEAGAAGTATRGLYRVHQFTKVEMFVLCRPEESDSYH 382 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E ++ E++ L LHY+ + + +GDLG A + +D+E W+ G Y EISS S C ++ Sbjct: 383 EELIKIEEDLFSALGLHYKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEISSASNCIDY 442 Query: 360 QSRRMNSRYR--------DPNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 QSRR+ RYR K +F HTLN + AV R ++ +LENY DGSV Sbjct: 443 QSRRLGIRYRPSEPTPAPPKKGKGSLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSV 502 Query: 408 TIPTVLRPYMNNLAVIKKE 426 IP LR +M L +I + Sbjct: 503 IIPGPLRAFMGGLELITPK 521 >gi|297158697|gb|ADI08409.1| seryl-tRNA synthetase [Streptomyces bingchenggensis BCW-1] Length = 425 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 145/429 (33%), Positives = 235/429 (54%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++RA + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVAVVDALLSADERRRSSSVRFDELRAEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + L + + E+ + ++L+ + N+ +VP+G Sbjct: 61 KASGDEKAE----LLKKAGELSASVKTADAEQDQAAEETQRLLLQLGNLVHPDVPVGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L + + ++H E+GE LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFAVLETVGTPRDFAAEGFTPKDHLELGELLGAIDTERGAKVSGSRFYYLTGVGALLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L I + G+ V P LV+ +AM GTG + + ADD++ D +L+ TSEV L Sbjct: 177 LVNAAIAQ-ATAAGFIPVLTPALVKPKAMEGTGFLGQAADDVYHLDKDDLFLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EI++ LP R+ + FR EAGS G+DTRG+ R HQF K E+ T E++ Sbjct: 236 AAYHMDEILDVSQLPRRYAGFSSCFRREAGSYGKDTRGIFRVHQFDKVEMFVYTTPEEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L +RV+ L +GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 AEHQRLLEWEKQWLTSLELPFRVIDLASGDLGASATRKFDCEAWIPTQGKYRELTSTSNT 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQSRR++ R R K ++ TLNG+ AV R ++A+LEN+ ADGSV +P LRPY Sbjct: 356 TEFQSRRLSIRMR--EDKRVRPLATLNGTLCAVTRTIVALLENHQQADGSVRVPEGLRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|266624055|ref|ZP_06116990.1| serine--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288864123|gb|EFC96421.1| serine--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 431 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 141/431 (32%), Positives = 226/431 (52%), Gaps = 6/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++ + + P + ++ LDE NR ++ + +RA RN S Q Sbjct: 1 MLDLKFVRENPEAVKQNIRNKFQDSKLPLVDEVIELDELNRAAKQEGDALRAERNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + LK + + + L LE++E E+ +KK++ IPN+ VPIG Sbjct: 61 IGGLMGQGKKEEAEELKKQVTAASDHLAELEEKERELDEKIKKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ H +I E +D D A K++G F L G +A L + Sbjct: 121 DDSENVEVQRYGEPVVPDFEVPYHTDIMERFDGIDLDSARKVAGNGFYYLMGDIARLHSS 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCVPPFMIRSEVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + II +SLP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTIIPEESLPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N + F HTLN + VA R LIA LEN L ADGSV IP VLRPY Sbjct: 360 GDAQARRLKIRVNGENGRKY-FAHTLNNTVVAPPRMLIAFLENNLQADGSVRIPEVLRPY 418 Query: 417 MNNLAVIKKEH 427 M + + + Sbjct: 419 MGGMEAMVPKG 429 >gi|302552608|ref|ZP_07304950.1| seryl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302470226|gb|EFL33319.1| seryl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 425 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 147/429 (34%), Positives = 240/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++RA + + I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKALGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + S L ++ + E + ++L+ + N+ +VP+G Sbjct: 61 KASGDEKAE----LLKKASRLAAEVKAADAERDAAATETQELLQRLGNLVHPDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + ++H E+G+ LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVTLETHGTIRDFGAEGFEPKDHLELGQILGAIDVERGAKVSGSRFYFLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LVR ++M GTG + + A D++ D +L+ TSEV L Sbjct: 177 LVNAAMAQ-ATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLADDDLYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EI+++ LPLR+ +P FR EAGS G+DTRG+ R HQF K E+ S EDS Sbjct: 236 AAYHMDEILDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQ 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L +RV+ + + DLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHQRLLEWEKQWLTSLELPFRVIDVASADLGSSAARKFDCEAWIPTQGKYRELTSTSDC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQSRR++ R RD K ++ TLNG+ AV R ++AILEN+ ADGSV +P VLRPY Sbjct: 356 AEFQSRRLSIRVRD--GKQVRPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|182417617|ref|ZP_02948938.1| seryl-tRNA synthetase [Clostridium butyricum 5521] gi|237669568|ref|ZP_04529548.1| serine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378536|gb|EDT76066.1| seryl-tRNA synthetase [Clostridium butyricum 5521] gi|237655012|gb|EEP52572.1| serine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 426 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 141/428 (32%), Positives = 225/428 (52%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NP+ + +KK+ + + + ++ LD++ R + +RA R + S Q Sbjct: 1 MLDLKFVRENPDIVKENIKKKFQDHKLQLVDEVIELDKEARKAQTDADALRANRKTVSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + + E+L LE EE + +K+ + IPN+ VPIG Sbjct: 61 IGALMAQGKKEEAEKLKEQVNNDAEKLANLEAEESRLQDEVKERMMKIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 NEN+ + G+ H +I E +D D A K++G+ F L G +A L A Sbjct: 121 DDNENVEVEKFGEPVVPDFEIPYHTDIMEKFNGIDLDSARKVAGSGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D E G+T V P ++R + G + + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-EKGFTYVIPPFMIRSSVVTGVMSFEEMGEMMYKIDGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I++ K+LP T+ +P FR E GS G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTIVDEKTLPQTLTSYSPCFRKEKGSHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWFDKLWKNTVDLFRSLDIPVRTLECCSGDLADLKVKSLDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + Q+RR+ R + K F HTLN + VA R LIA LEN LN DGS+ IP LRPY Sbjct: 360 SDAQARRLKIRVNGEDGKKY-FPHTLNNTVVAPPRMLIAFLENNLNEDGSINIPEALRPY 418 Query: 417 MNNLAVIK 424 M ++IK Sbjct: 419 MGGKSIIK 426 >gi|291531935|emb|CBK97520.1| seryl-tRNA synthetase [Eubacterium siraeum 70/3] Length = 431 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 142/429 (33%), Positives = 222/429 (51%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+++R+NPE + +KK+ + ++ LD++ R K +++R RN S Q Sbjct: 1 MIDIKFLRENPEAVKENIKKKFQDEKIVLVNEVIELDKELRAAQLKADNLRGDRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + ++L LEK+E E+ +KK + IPN+ VPIG Sbjct: 61 IGGLMAQGKKDEAEQIKAQVKQFSDELEELEKKEEELGEEVKKRMMIIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A +++G F L G +A L A Sbjct: 121 DDSENVEIKRYGEPVVPDFEVPYHSEIMERFNGIDLDSARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VLAYARDFMI-DRGFTYCIPPYMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I E + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTINEEEKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + +D+ R + C+GDL K+YD+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSMDIPVRTIECCSGDLADLKVKSYDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + K F HTLN + VA R LIA LEN L ADGSV IP VLR Y Sbjct: 360 GDAQARRLKIRVKSKD-KGNYFAHTLNNTVVAPPRMLIAFLENNLCADGSVKIPEVLRKY 418 Query: 417 MNNLAVIKK 425 M + I Sbjct: 419 MGGIDRIVP 427 >gi|282863390|ref|ZP_06272449.1| seryl-tRNA synthetase [Streptomyces sp. ACTE] gi|282561725|gb|EFB67268.1| seryl-tRNA synthetase [Streptomyces sp. ACTE] Length = 425 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 151/429 (35%), Positives = 240/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE R + +++R+ + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVALVDALLSADELRRSSGVRFDELRSEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A L + LK ++ + E + K+L+ + NV E+VP+G Sbjct: 61 KA----TPEERTELLKKADQLKTEVKAADAARDEADAEAKRLLLLLGNVVHEDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + ++H E+GE+LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVVLETHGTIRDFGAEGFEPKDHLELGESLGAIDMERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+ + P LVR AM GTG + + A++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFVPMLTPALVRPRAMEGTGFLGQAAENVYHLEKDDYYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EIIE+ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S D+ Sbjct: 236 AAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L ++ L L+L ++V+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHRRLLDWEKQWLTALELPFQVIDVATGDLGASASRKFDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R RD K ++ TLNG+ AV R ++AILEN+ ADGSV +P +LRPY Sbjct: 356 DGFQARRLSVRMRD--GKKVQPLSTLNGTLCAVPRTIVAILENHQLADGSVRVPEILRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|328950765|ref|YP_004368100.1| Seryl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] gi|328451089|gb|AEB11990.1| Seryl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] Length = 424 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 164/429 (38%), Positives = 252/429 (58%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI++IR++PE + ++K+ P E +L LD + R +++ +E RA + + + Sbjct: 1 MLDIKFIREHPEQVKEGIRKKGELEALPLVEAVLELDARRRQILRTLEAQRAEQKRLAKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +G+ A+G + L ++ LE EE V L++ + IPN+P VP G Sbjct: 61 VGRRKAQG--EDAREILEAAGRLASEIKALEAEERTVAERLREALLQIPNLPHPSVPEGA 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N ++++ G+ P + H+E+ LGL+DF+R K++G+ F G A L R Sbjct: 119 DETGNQVVKTWGEPPGFDFEPKPHWELARTLGLVDFERGAKVTGSGFPFFVGDGARLVRG 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L Q +D H E G+TEV +PLLV + GT Q+P M+ +DG +LIPT+E S+T Sbjct: 179 LVQLFLDFHA-ERGFTEVHSPLLVNRASAIGTAQLPDKEGQMYEVSDGFYLIPTAETSVT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+ EI+ +++LPL++ P FR EAGS G+D RG+ R HQF K E+V + S+ Sbjct: 238 NLHRDEILPAEALPLKYAAYTPCFRREAGSYGKDVRGLNRLHQFDKVEMVVFEHPDRSYE 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E + AEE+L+ L L YR + +CTGD+GF+ K YDLEVW AGQ + E+SS S Sbjct: 298 ALEWLTREAEELLELLGLPYRRLLMCTGDMGFAQAKKYDLEVWSAGQGRWLEVSSVSNFE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +Q+RRMN R+R+P K +F HTLNGSG+A+ R + A+LE+ +A+G+V +P + Y+ Sbjct: 358 AYQARRMNLRFREPGGK-PQFVHTLNGSGLALPRVIAALLEHNQDAEGNVHLPEAVAEYV 416 Query: 418 NNLAVIKKE 426 V+K Sbjct: 417 -GKRVLKAR 424 >gi|148378513|ref|YP_001253054.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153934301|ref|YP_001382901.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153937368|ref|YP_001386467.1| seryl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|148287997|emb|CAL82064.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152930345|gb|ABS35845.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152933282|gb|ABS38781.1| serine--tRNA ligase [Clostridium botulinum A str. Hall] Length = 425 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 145/428 (33%), Positives = 223/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++K+ + +++LD + R + + +++RA+RN S Q Sbjct: 1 MLDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRDIKPEADNLRAKRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+ + LK + + + L LEK E E+ +KK++ IPN+ VPIG Sbjct: 61 IGGLMAQEKKGEAEELKKQVTAASDHLAELEKGESELEEKIKKIMITIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIQRYGEPVVPDFEVPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSEVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I SLP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSV 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N K F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 GDAQARRLKIRVAGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPVPLQPY 417 Query: 417 MNNLAVIK 424 M + VIK Sbjct: 418 MGGMTVIK 425 >gi|319956131|ref|YP_004167394.1| seryl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] gi|319418535|gb|ADV45645.1| seryl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] Length = 414 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 256/419 (61%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D+++++ N E L+K+ + E + EK + + E+ +A +N S G Sbjct: 1 MIDLKYLQNNFEEASALLRKKGVGEEALNRLKERFEKLKEFQRAFEESKAEQNRLSRLFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q EG V L+ ++LK Q+ L+++ E +L L IPN P E VP G Sbjct: 61 QYKREGK--DVGELQERVASLKSQVNELQEQAREAEKALVALAMGIPNFPDESVPEGLDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ I+ V + + +EH+E+ E G +DF+R KL+ +RF++L G A L+ AL Sbjct: 119 EDNVEIKRVLEPRAFDFQPKEHWELAEQNGWIDFERGVKLAKSRFALLRGQGARLQTALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 F +D + G+ E + P +V E + GTGQ+PKF +D+F D +LIPT+EV LTN Sbjct: 179 NFFLDRNI-AAGFEEYAVPFMVNSEMLRGTGQLPKFEEDLFKVCDEDLYLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y EI+ ++ LP+ T +P FR EAGSAGRDTRGM+RQHQF K E+V+ITR E+S Sbjct: 238 IYHDEILPAEELPVLMTAYSPCFRKEAGSAGRDTRGMIRQHQFAKVEMVAITRPEESDEI 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ++M+ A ++L L L +R V LCTGDLGFSA +T DLEVWL GQ YREISS S + Sbjct: 298 FQKMVQQASDLLTELGLPHRWVELCTGDLGFSAARTVDLEVWLPGQGKYREISSISNTRD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR R++D K HTLNGS +AVGR L+AI+ENY ADGS+ IP L+PY+ Sbjct: 358 FQARRAKIRFKD--GKKNWLVHTLNGSALAVGRTLVAIMENYQQADGSIEIPEALKPYL 414 >gi|317054822|ref|YP_004103289.1| seryl-tRNA synthetase [Ruminococcus albus 7] gi|315447091|gb|ADU20655.1| seryl-tRNA synthetase [Ruminococcus albus 7] Length = 429 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 135/430 (31%), Positives = 219/430 (50%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ IR NPE + +KK+ + + + D++ R K +++R +RN S Q Sbjct: 1 MIDIKLIRTNPELVKENIKKKFQDEKLVLVDEVAEFDKEYRAARTKADELRNQRNVKSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G +A+K E + + ++L LE +E E+ + +++ + IPN+ + VPIG Sbjct: 61 IGALMGKGQKEEAEAVKAEVNAMAKELADLEVKEEELEAKIRERMLVIPNIIDDSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H +I E +D D A + SG F L G +A L A Sbjct: 121 DDSENVEIEKFGEPVVPDFEVPYHVDIMETFDGIDLDAARETSGNGFYYLKGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYYVPPFMIRSSVVTGVMSFAEMENMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIKTTLPEAKLPQTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 T ++++ + + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 TWYDKLWQNSVDFFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + F HTLN + VA R LIA LEN LN DG+V+IP LR Y Sbjct: 360 GDAQARRLQIRVKGEDGSKY-FAHTLNNTVVAPPRMLIAFLENNLNGDGTVSIPEPLRMY 418 Query: 417 MNNLAVIKKE 426 M + Sbjct: 419 MGGKDKLVPT 428 >gi|213962016|ref|ZP_03390281.1| seryl-tRNA synthetase [Capnocytophaga sputigena Capno] gi|213955369|gb|EEB66686.1| seryl-tRNA synthetase [Capnocytophaga sputigena Capno] Length = 423 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 159/426 (37%), Positives = 237/426 (55%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + IR+ + + LKKR+ + + I++LDEK R +++ A+ N+ S +I Sbjct: 1 MLQLNTIREEKDRVLSGLKKRNFKELHLIDNIIALDEKRRATQLSLDETLAKSNNLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G +ALK +T+TLKE + L + L L+ +PN+P E VP GTS Sbjct: 61 GNLFKAGETDKANALKEQTATLKEDIKTLTDTLNTTVEELNNLLYRVPNIPNELVPEGTS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+++ G+ P+ + H+E+ + L+DF+ KL+GA F V G A L+RAL Sbjct: 121 EADNVVVFEAGEIPNLGKEALPHWELAKKYDLIDFELGVKLTGAGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T E GY E P +V + + YGTGQ+P M+ D +LIPT+EV +T Sbjct: 181 ITYFLDKNT-EAGYNEFQVPHVVNEASGYGTGQLPDKEGQMYHIGVDNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++ LP+ T P FR EAGS G RG+ R HQF K E+V I ++S+ Sbjct: 240 NIFRDTLLNESDLPICCTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDNSYK 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ + IL L L Y ++ LC GDLGF++ TYD EV+ Q + EISS S Sbjct: 300 ALEGMIEHVKGILNELKLPYHILRLCGGDLGFTSAITYDFEVYSTAQEKWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R++D + K+ + HTLNGS +A+ R L ILENY +G + IP VLR Y Sbjct: 360 TFQANRLKLRFKDSDGKN-RLAHTLNGSSLALPRVLAGILENYQTPEG-IVIPEVLRKYT 417 Query: 418 NNLAVI 423 +I Sbjct: 418 -GFDII 422 >gi|57234640|ref|YP_181319.1| seryl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|123618838|sp|Q3Z8Y0|SYS_DEHE1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|57225088|gb|AAW40145.1| seryl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 413 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 166/419 (39%), Positives = 253/419 (60%), Gaps = 12/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+N E + A+ R+ + + IL LD R L ++++ +RA+R + Q Sbjct: 1 MLDLKFIRENTELVRKAVAARNTDAPIDEILELDSCRRTLSQELDTLRAKRKIIAKQ--- 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A E L+ ++ LE EV L + +PN+P VP+G + Sbjct: 58 --------RDEAAIEEGRVLRGRISELETGLSEVEEKLTDRLLRVPNIPDASVPVGKDES 109 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+++ G+K + + H+E+GEAL ++DFDR KLSG+RF +L G A L+RAL Sbjct: 110 ENVVLYYRGEKRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGEGARLQRALIA 169 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 FM+DLHT +HGYTE+ P +++ E + +G +PKFAD+++ + W +PT+E LTNL Sbjct: 170 FMLDLHTRKHGYTEIYPPYMIKRECLVASGNLPKFADNLYHDAEEDYWWVPTAEAPLTNL 229 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+ + LP+ + FR E SAG+D RG+ R HQF K EL + EDSF E Sbjct: 230 HRDEILSVEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFDEL 289 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+M++ AEEI L + YR+ L T D+ F + K+YD+E++ G + + E+SSCS C +F Sbjct: 290 EKMVADAEEIADALKIPYRLKQLVTADISFGSAKSYDIEMYSPGVDEWLEVSSCSNCTDF 349 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q RR N R+R +F HTLNGSG+A+ R +I+++ENY DGS+ +P VLRP+M Sbjct: 350 QGRRANVRFRRTPEAKPEFVHTLNGSGLALPRVMISVIENYQLPDGSIVVPEVLRPFMG 408 >gi|8039794|sp|O58441|SYS_PYRHO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|149241121|pdb|2DQ0|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus Horikoshii Complexed With A Seryl-Adenylate Analog gi|149241122|pdb|2DQ0|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus Horikoshii Complexed With A Seryl-Adenylate Analog gi|149241128|pdb|2DQ1|A Chain A, Crystal Structure Of Ph0710 With Atp gi|149241129|pdb|2DQ1|B Chain B, Crystal Structure Of Ph0710 With Atp gi|149241130|pdb|2DQ2|A Chain A, Crystal Structure Of Ph0710 Apo Form gi|149241131|pdb|2DQ2|B Chain B, Crystal Structure Of Ph0710 Apo Form gi|198443182|pdb|2ZR2|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus Horikoshii Complexed With Atp gi|198443183|pdb|2ZR2|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus Horikoshii Complexed With Atp gi|198443184|pdb|2ZR3|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus Horikoshii gi|198443185|pdb|2ZR3|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus Horikoshii Length = 455 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 160/450 (35%), Positives = 250/450 (55%), Gaps = 27/450 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ IR+NPE + L KR + + IL LD + R +K+I +R RN + + Sbjct: 1 MLDIKLIRENPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNKIAVE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ +G VD L ++ + +++ LE E E+ + + +PN+ VP+G Sbjct: 61 IGKRRKKGEP--VDELLAKSREIVKRIGELENEVEELKKKIDYYLWRLPNITHPSVPVGK 118 Query: 118 SANENILIRSVGKKPSA--------------------IHLSREHFEIGEALGLMDFDRAT 157 N+N+ IR GK + H ++ E LG DF RA Sbjct: 119 DENDNVPIRFWGKARVWKGHLERFLEQSQGKMEYEILEWKPKLHVDLLEILGGADFARAA 178 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K+SG+RF L + L+ AL +F +D E G+T V P +VR G+ F D Sbjct: 179 KVSGSRFYYLLNEIVILDLALIRFALDR-LIEKGFTPVIPPYMVRRFVEEGSTSFEDFED 237 Query: 218 DMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LIPT+E L ++++EI++ K LPL + ++P FR EAG+AG+DT+G+ Sbjct: 238 VIYKVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIF 297 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E +R E+S+ HE+++ AEE+ + L++ YRVV++CTGDLG+ A K YD Sbjct: 298 RVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYD 357 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E W+ GQ +RE+ S S C ++Q+RR+N R+RD + ++ HTLN + +A R ++AI Sbjct: 358 IEAWMPGQGKFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAI 417 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 LEN+ DG+V IP VL Y ++ E Sbjct: 418 LENHQEEDGTVRIPKVLWKYTGFKEIVPVE 447 >gi|291518415|emb|CBK73636.1| seryl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4] Length = 429 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 137/429 (31%), Positives = 223/429 (51%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+++R+NP+ + +KK+ E + + ++ LD+K R ++ +D+RA N S Q Sbjct: 1 MIDIKFLRENPDAVKENIKKKFQEHKLGLVDEVIELDDKRRATQQQADDMRAEMNKASKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G +A K E + LK+++ LE E E+ +++++ IPN+ VPIG Sbjct: 61 IGALMAQGKKEEAEAAKAEVAELKQKIKDLEPVEKELADKVEEIMMKIPNIIDPSVPIGP 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N+ I G+ H +I E +D D A K++G F L G +A L A Sbjct: 121 DDSCNVEIEKFGEPVVPDFEIPYHTDIMERFNGIDLDAAGKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCIPPFMIRSNVVTGVMSFEEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + + +LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTLNDEANLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MYYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + F HTLN + VA R LIA LEN L ADGSV IP L+PY Sbjct: 360 GDAQARRLKIRVKGEDGSKY-FAHTLNNTVVAPPRMLIAFLENNLRADGSVAIPKALQPY 418 Query: 417 MNNLAVIKK 425 M + Sbjct: 419 MGGKTELTP 427 >gi|14590588|ref|NP_142656.1| seryl-tRNA synthetase [Pyrococcus horikoshii OT3] gi|3257118|dbj|BAA29801.1| 460aa long hypothetical seryl-tRNA synthetase [Pyrococcus horikoshii OT3] Length = 460 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 160/450 (35%), Positives = 250/450 (55%), Gaps = 27/450 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ IR+NPE + L KR + + IL LD + R +K+I +R RN + + Sbjct: 6 MLDIKLIRENPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNKIAVE 65 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ +G VD L ++ + +++ LE E E+ + + +PN+ VP+G Sbjct: 66 IGKRRKKGEP--VDELLAKSREIVKRIGELENEVEELKKKIDYYLWRLPNITHPSVPVGK 123 Query: 118 SANENILIRSVGKKPSA--------------------IHLSREHFEIGEALGLMDFDRAT 157 N+N+ IR GK + H ++ E LG DF RA Sbjct: 124 DENDNVPIRFWGKARVWKGHLERFLEQSQGKMEYEILEWKPKLHVDLLEILGGADFARAA 183 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K+SG+RF L + L+ AL +F +D E G+T V P +VR G+ F D Sbjct: 184 KVSGSRFYYLLNEIVILDLALIRFALDR-LIEKGFTPVIPPYMVRRFVEEGSTSFEDFED 242 Query: 218 DMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LIPT+E L ++++EI++ K LPL + ++P FR EAG+AG+DT+G+ Sbjct: 243 VIYKVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIF 302 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E +R E+S+ HE+++ AEE+ + L++ YRVV++CTGDLG+ A K YD Sbjct: 303 RVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYD 362 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E W+ GQ +RE+ S S C ++Q+RR+N R+RD + ++ HTLN + +A R ++AI Sbjct: 363 IEAWMPGQGKFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAI 422 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 LEN+ DG+V IP VL Y ++ E Sbjct: 423 LENHQEEDGTVRIPKVLWKYTGFKEIVPVE 452 >gi|210614282|ref|ZP_03290153.1| hypothetical protein CLONEX_02367 [Clostridium nexile DSM 1787] gi|210150766|gb|EEA81775.1| hypothetical protein CLONEX_02367 [Clostridium nexile DSM 1787] Length = 425 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 139/428 (32%), Positives = 225/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NPE + +K + + P + ++ LD +NR + +++E +RA +N S Q Sbjct: 1 MLDIKFLRANPEIVKQNIKNKFQDSKLPLVDEVIELDLRNREIKQEVEALRAEKNKVSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + +++ L EE EV +K ++ IPN+ VPIG Sbjct: 61 IGALMAQGKKEEAEEVKKRIAEDGQKIEQLSVEEKEVEEKIKTIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ H EI E +D + A K++G F L G +A L A Sbjct: 121 DDSENVELQKYGEPVVPDFEIPYHTEIMEKFNGIDLEAAGKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCIPPYMIRSNVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + ++E ++LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTMLEEETLPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++M ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWYDKMWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQQKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+N R + + K F HTLN + VA R LIA LEN L DGSV IP L+PY Sbjct: 360 GDAQARRLNIRVKGKDGK--YFAHTLNNTVVAPPRMLIAFLENNLQEDGSVKIPAALQPY 417 Query: 417 MNNLAVIK 424 M I+ Sbjct: 418 MGGKTEIR 425 >gi|332158998|ref|YP_004424277.1| seryl-tRNA synthetase [Pyrococcus sp. NA2] gi|331034461|gb|AEC52273.1| seryl-tRNA synthetase [Pyrococcus sp. NA2] Length = 456 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 161/450 (35%), Positives = 248/450 (55%), Gaps = 27/450 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ IR+NP+ + L KR + + IL LD + R +K+I +R RN + + Sbjct: 1 MLDIKLIRENPDLVKNDLIKRGELEKVKWIDEILKLDAEWRAKLKEINKLRHERNKIAIE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG G +D L ++ + ++ LEKE E+ + + +PN+ VP+G Sbjct: 61 IGNKRKRGEP--IDDLLAKSKEIVRRIETLEKEVEELRKRIDYYLWRLPNITHPTVPVGK 118 Query: 118 SANENILIRSVGKKPSA--------------------IHLSREHFEIGEALGLMDFDRAT 157 N+N+ IR GK R H ++ E LG DF RA Sbjct: 119 DENDNVPIRFWGKAKVWKGHLERFLEQSQGKMEYEVLEWKPRLHVDLLEILGGADFARAA 178 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K+SG+RF L + L+ AL +F +D E G+T V P +VR G+ F D Sbjct: 179 KVSGSRFYYLLNEIVILDLALIRFALDR-LIEKGFTPVIPPYMVRRFVEEGSTTFEDFED 237 Query: 218 DMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LIPT+E L ++++EI++ K LPL + ++P FR EAG+AG+DT+G+ Sbjct: 238 VIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIF 297 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E +R E+S+ HER++ AEE+ + L++ YRVV++CTGDLG+ A K YD Sbjct: 298 RVHQFHKVEQFVYSRPEESWEWHERIIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYD 357 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E W+ GQ +RE+ S S C ++Q+RR+N R+RD + ++ HTLN + +A R ++AI Sbjct: 358 IEAWMPGQGRFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAI 417 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 LEN+ DG+V IP VL Y ++ E Sbjct: 418 LENHQEEDGTVKIPKVLWKYTGFKEIVPVE 447 >gi|300870425|ref|YP_003785296.1| seryl-tRNA synthetase [Brachyspira pilosicoli 95/1000] gi|300688124|gb|ADK30795.1| seryl-tRNA synthetase [Brachyspira pilosicoli 95/1000] Length = 426 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 190/427 (44%), Positives = 264/427 (61%), Gaps = 5/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ IR+N E ++ L+KR + + + +L+ + L+K++E RA++N +S ++G+ Sbjct: 1 MIDVKLIRENIELVEENLRKRRSKVSLDKLKALEHERLDLLKEVEQDRAKKNESSKKVGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + G + +K E T E L E++ E+ ++ I +PN+ E+VP G Sbjct: 61 CMKAGKKEEAEKIKEEMKTFTESLNKKEEKLAELEEAVNNEILYLPNMLSEDVPDGDDEK 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N I G+ ++H +I L ++D +RA +++ RFS++ G A LERAL Sbjct: 121 ANKEIIRWGEPRKFDFEVKDHVDIAVGLDILDIERAVRMARTRFSLMKGKGAALERALIN 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 FM+ HTSEHGYTE P+LV M GTGQ+PKF +D+F T +LIPT+EV LTN Sbjct: 181 FMLKKHTSEHGYTEYVPPMLVNGRTMTGTGQLPKFEEDLFKTTDDPALYLIPTAEVPLTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y EII LPL T P FRSEAGS G+D RG++RQHQF K ELV I + S E Sbjct: 241 IYREEIIPENMLPLYCTAYTPCFRSEAGSYGKDMRGLIRQHQFDKVELVKICAADKSKEE 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE+ML AE IL+ L+L YRVV L +GD+G +A KT+D+EVWL QN+YREISS S C + Sbjct: 301 HEKMLKDAESILQALELPYRVVVLSSGDIGNAAYKTFDIEVWLPSQNMYREISSVSNCWD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RRM R R + + HTLNGSG+AVGR IAILENY ADGSV IP LRP+ Sbjct: 361 YQARRMQMRTRR--NGKTELVHTLNGSGIAVGRTWIAILENYQQADGSVIIPDALRPFT- 417 Query: 419 NLAVIKK 425 I+K Sbjct: 418 GFDKIEK 424 >gi|257054210|ref|YP_003132042.1| seryl-tRNA synthetase [Saccharomonospora viridis DSM 43017] gi|256584082|gb|ACU95215.1| seryl-tRNA synthetase [Saccharomonospora viridis DSM 43017] Length = 421 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 146/427 (34%), Positives = 242/427 (56%), Gaps = 10/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+ P+ + + + R + + +LSLD + R I K +++RA + +IG Sbjct: 1 MIDLRTLREEPDVVRASQRARGEDVGVVDRLLSLDAERRSAIAKADNLRAEQKQLGKRIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A +AL L Q+ E E++ +KL + +PN+ +VP Sbjct: 61 KASG----EEREALLARGKELAAQVKEAEAEQNRASEEFEKLYNVVPNIVHPDVP-EGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ ++++ VG ++H E+GEALG +D +R K+SGARF LTG A L+ AL Sbjct: 116 DDYVVLKRVGTPREFDFTPKDHLELGEALGAIDTERGAKVSGARFYFLTGVGAQLQLALL 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 E G+ + P+LVR E M GTG + + +++ D +L+ TSEVSL Sbjct: 176 NMAA-AQAVEKGFQLMIPPVLVRPEIMAGTGFLGAHSSEVYRLADDDLYLVGTSEVSLAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + PLR+ + FR EAGS G+DTRG++R HQF K E+ R ++ E Sbjct: 235 YHADEILDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFIFCRPSEAEAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE++L+ EE+L ++++ YRV+ GDLG SA + YD E W+ Q YRE++S S C Sbjct: 295 HEKLLAWEEEMLAKIEVPYRVIDTAAGDLGTSAARKYDCEAWIPTQQAYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+R+++ RYRD + + + TLNG+ +A R ++AILEN+ DGSV +P ++P++ Sbjct: 355 YQARKLSVRYRDEDGR-PQHAATLNGT-LATTRWIVAILENHQQPDGSVRVPEAMQPFLG 412 Query: 419 NLAVIKK 425 V+ Sbjct: 413 GRTVLTP 419 >gi|170754762|ref|YP_001780158.1| seryl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|169119974|gb|ACA43810.1| seryl-tRNA synthetase [Clostridium botulinum B1 str. Okra] Length = 425 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 147/428 (34%), Positives = 223/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++K+ + +++LD + R + + +++RA RN S Q Sbjct: 1 MLDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRNIKPEADNLRAMRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + + + L LEK E E+ +KK++ IPN+ VPIG Sbjct: 61 IGGLMAQGKKGEAEELKKQVTVASDHLAELEKRESELEEKIKKIMITIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIQRYGEPVVPDFQVPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSEVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I SLP T+ +P FR E G+ G + RG+ R HQF K E++ + R EDS Sbjct: 240 IGKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCRPEDSV 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N K F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 GDAQARRLKIRVAGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPVPLQPY 417 Query: 417 MNNLAVIK 424 M + VIK Sbjct: 418 MGGMTVIK 425 >gi|300174045|ref|YP_003773211.1| seryl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299888424|emb|CBL92392.1| Seryl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 436 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 190/434 (43%), Positives = 271/434 (62%), Gaps = 15/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++++R+N + L+ R + P +L+LD++ R I+K+E+++A RN+ S +I Sbjct: 1 MLDMKYLRKNVTEVTQKLQDRGVSPDNLIELLNLDQERRDTIQKVENLKADRNTASDKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A N + +++ L+ + E+ ++ L + +PN+ EVP+G Sbjct: 61 YAKR--NQEDASQSILAMQRVSQEIKKLDARQLELNDQVQNLAAHLPNLAAPEVPVGVDE 118 Query: 120 NENILIRSVGKKP---------SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + NI R + H+EIGEALG++DF+R K+SGARF G Sbjct: 119 STNIEQRVWEPTDYQKRPHARLETPKWLKAHYEIGEALGILDFERGAKVSGARFLYYVGD 178 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLI 229 A LERA+ FM+D H + GYTE+ P++V D AM+GTGQ PKF DD + + + I Sbjct: 179 GARLERAVYNFMLDEH-RKEGYTEMITPIVVNDAAMFGTGQYPKFQDDAYRVSGLAQTYI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+EV LTN YS E + ++ LP++FT L+PSFR EAG+AG+DTRG++R HQF K E+V Sbjct: 238 PTAEVPLTNYYSGETLPAEDLPIKFTALSPSFRKEAGAAGKDTRGLIRLHQFNKVEMVKF 297 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T+ + S+ E E M + AE IL++L L Y V+ L TGD+GFSA KTYD+EVW+ Q LYRE Sbjct: 298 TKPDQSYAELESMTANAESILQKLGLPYHVIMLSTGDMGFSAAKTYDIEVWMPQQTLYRE 357 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISS S FQ+RRM+ YRD ++K L+ HTLNGSG+AVGR + AILENY N DGS+TI Sbjct: 358 ISSVSNTEAFQARRMHITYRDEDNK-LQLVHTLNGSGLAVGRTVAAILENYQNEDGSITI 416 Query: 410 PTVLRPYMNNLAVI 423 P +LR YM + Sbjct: 417 PEILRSYMGGQEKL 430 >gi|291558417|emb|CBL37217.1| seryl-tRNA synthetase [butyrate-producing bacterium SSC/2] Length = 428 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 135/430 (31%), Positives = 223/430 (51%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NP+ + +K + + P + ++ LD++NR + ++++ +RA RN S Q Sbjct: 1 MLDIKFLRENPDVVKQNIKNKFQDRKLPLVDQVIELDKENREIKQEVQALRADRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + + +++ L + E V +K+++ IPN+ VPIG Sbjct: 61 IGALMGQGKKEEAEEVKKQVTASADRIEELSEREKVVEEKIKEIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI E+ +D D A K++G F L G +A L A Sbjct: 121 DDSENVELERFGEPVVPDFEVPYHTEIMESFDGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VIAYARDFMI-DRGFTYCVPPFMIRSNVVTGVMSFDEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + E LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTTTEEAELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 DWYEKLWKNTVDLFRSMDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + N F HTLN + VA R LIA LEN L DGSV IP VLRPY Sbjct: 360 GDAQARRLRIRIKGENGN--YFAHTLNNTVVAPPRMLIAFLENNLREDGSVAIPEVLRPY 417 Query: 417 MNNLAVIKKE 426 M ++ + Sbjct: 418 MGGKESLQPK 427 >gi|153006815|ref|YP_001381140.1| seryl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] gi|152030388|gb|ABS28156.1| seryl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] Length = 463 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 184/430 (42%), Positives = 275/430 (63%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ + Q+ E + L +R + L + R L ++E + ++ +A+I Sbjct: 29 MLDLKAVAQDFEGFERKLARRGEAAVQAIAPVKPLAARRRELNVQLEKQKKEQSDANAKI 88 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + + + + + + + L + + E+E +V + +++L+ +PN P E VP G Sbjct: 89 RELMRT-DKAAGEKARADLRALGDSVKATEQELGQVEAEIERLLLLVPNPPHESVPDGKD 147 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N ++ + G+KP+ + H+E+GEALG++++ +A KLSG+RF++ G A LERAL Sbjct: 148 EHDNRVVSTWGEKPAMDFKPKPHWELGEALGVLEWQQAAKLSGSRFTISKGAAARLERAL 207 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSL 236 F +D+HT GYTE+ P LV E M GTGQ+PKF +D+F T +LIPT+EV + Sbjct: 208 AAFFVDVHT-SRGYTEILPPYLVTAETMTGTGQLPKFEEDLFKTQGESPMYLIPTAEVPV 266 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI E+ LP+ + P FR+EAG+AGRDTRG++RQHQF K ELV + E+S+ Sbjct: 267 TNMHRDEIFEANQLPISYCAWTPCFRAEAGAAGRDTRGLIRQHQFHKVELVKFAKAEESY 326 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHE+M+ A E+L+RL LH+RV LCTGD+GFS+ KTYD+EVW GQ+ +REISS S C Sbjct: 327 AEHEKMVDDACEVLRRLGLHHRVSLLCTGDMGFSSAKTYDVEVWCPGQDQFREISSVSNC 386 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR+ RYR K + HTLNGSGVA+GR ++AILENY ADG+V +P LRPY Sbjct: 387 EDFQARRIRVRYRGEGGK-PRLAHTLNGSGVAIGRTVVAILENYQQADGTVVVPEALRPY 445 Query: 417 MNNLAVIKKE 426 M L I + Sbjct: 446 MGGLERIAPQ 455 >gi|291563547|emb|CBL42363.1| seryl-tRNA synthetase [butyrate-producing bacterium SS3/4] Length = 426 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 142/428 (33%), Positives = 228/428 (53%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++ + + P + ++ LDE+NR + K+ +D+RA RN S Q Sbjct: 1 MLDLRFVRENPEIVKQNIRNKFQDAKLPLVDEVIELDEENRKVKKEADDLRASRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + + + L LE++E ++ +KK++ IPN+ VPIG Sbjct: 61 IGALMGQGKKEEAEEVKKQVTAASDHLAELEEKEKDLEERIKKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G H EI E +D D A +++G F L G +A L A Sbjct: 121 DDSENVEVQKYGDPVVPDFEIPYHTEIMEKFNGIDLDSARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 VIAYARDFMI-DRGFTYCVPPFMIRSDVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +II + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDQIIPEEELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSMDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R P+ K F HTLN + VA R LIA LEN L ADGSV IP VLRPY Sbjct: 360 GDAQARRLRIRVNGPDGKKY-FAHTLNNTVVAPPRMLIAFLENNLQADGSVRIPEVLRPY 418 Query: 417 MNNLAVIK 424 M IK Sbjct: 419 MGGKTEIK 426 >gi|255530329|ref|YP_003090701.1| seryl-tRNA synthetase [Pedobacter heparinus DSM 2366] gi|255343313|gb|ACU02639.1| seryl-tRNA synthetase [Pedobacter heparinus DSM 2366] Length = 423 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 160/426 (37%), Positives = 238/426 (55%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + +IR+N E + L R+ + + I+ DE+ R ++++ A NS++ QI Sbjct: 1 MLQVNYIRENREKVLAGLNLRNFKQPELVDEIIKTDEERRQFQTSLDNLSAVANSSAKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ + G + LK ET+ KEQ+ L E S L L+ +PN+P V G++ Sbjct: 61 GELMRNGKKDEAEVLKAETTANKEQIKTLSDELAAAESKLHNLLVQLPNLPYHLVKAGST 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN ++ G + + H+E+ ++DF+ TK++GA F V G A L+RAL Sbjct: 121 PEENEVVYVHGAPAAITETALPHWELTSKYDIIDFELGTKIAGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 F +D H++ GY E+ P LV + + +GTGQ+P M+ D +LIPT+EV +T Sbjct: 181 INFFLD-HSTAEGYREMQVPHLVNEASGFGTGQLPDKEGQMYHVGIDNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY I++ + LP++ T P FR EAGS G RG+ R HQF K E+V I E S+ Sbjct: 240 NLYRDVILKEEELPVKNTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVQIVHPEASYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E+M + + +L++L LHYRV+ LC GD+GF+A TYD+EVW A Q + E+SS S Sbjct: 300 VLEQMSAYVQTLLQKLGLHYRVLRLCAGDMGFTAAMTYDMEVWSAAQQRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +QS R+ R++ K + HTLNGS +A+ R + AILEN A G + IP VL PY Sbjct: 360 TYQSNRLKLRFKGATGK-TQLAHTLNGSALALPRIVAAILENNQTAKG-IKIPEVLVPYT 417 Query: 418 NNLAVI 423 I Sbjct: 418 -GFEYI 422 >gi|226326130|ref|ZP_03801648.1| hypothetical protein COPCOM_03949 [Coprococcus comes ATCC 27758] gi|225205672|gb|EEG88026.1| hypothetical protein COPCOM_03949 [Coprococcus comes ATCC 27758] Length = 426 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 140/428 (32%), Positives = 224/428 (52%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++RQNP+ + +KK+ + P + ++ LD++NR + ++E +RA +N S + Sbjct: 1 MLDIKFLRQNPDVVKENIKKKFQDEKLPLVDEVIELDKRNREIKGEVEALRAEKNKVSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A G + LK + ++ L EE EV + +KK + IPN+ VPIG Sbjct: 61 IGACMAHGEKEKAEELKKKVQENAARMEELSAEEKEVEAKIKKDMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N+ I G+ H EI E +D + A K++G F L G +A L A Sbjct: 121 DDSQNVEIEKFGEPVVPDFEIPYHTEIMEKFNGIDLESAGKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCIPPFMIRSNVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +++ LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTMLDEAELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 EWYDKLWKNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + F HTLN + VA R LIA LEN L ADGSV IP VLRPY Sbjct: 360 GDAQARRLGIRVKGSDGNKY-FAHTLNNTVVAPPRMLIAFLENNLQADGSVRIPEVLRPY 418 Query: 417 MNNLAVIK 424 M + I+ Sbjct: 419 MGGKSEIR 426 >gi|318040473|ref|ZP_07972429.1| seryl-tRNA synthetase [Synechococcus sp. CB0101] Length = 424 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 177/422 (41%), Positives = 255/422 (60%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NPE + L +R + + + + R L ++ +++A N ++G Sbjct: 1 MLDQRLLRDNPELITQQLGRRGMSLDLTGLQLMARQERDLEEQRSNLQAEGNRIGKEVGL 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G N V L+NE + +K+Q+ +LE+EE + + LK + +PN+P E P G Sbjct: 61 KIKGGAAPNSPEVQELRNEGNRIKQQVAVLEEEEKALEAKLKAQLLTLPNLPSPEAPDGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ I+ G + EH++I E L L + +R+ +++ +RF L G A LERA Sbjct: 121 SEVDNVEIKRWGSPRAQEDWLEEHWQIAERLELFEAERSVRIAQSRFVTLLGQGARLERA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLH GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 181 LINFMLDLH-GGKGYREVLPPILVNSASLTGSGQLPKFAEESFRCAEDDLWLTPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ E+I ++ LPL++ P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 240 TSLHRDEVIPAEQLPLKYVAYTPCFRREAGSYGRDTRGLIRLHQFNKVELYWFCHPDHSA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++ + AE +L+ L+L YR + LCTGD+GFSA +TYDLEVWL G YREISSCS C Sbjct: 300 EAHQQITADAEAVLEALELPYRKIELCTGDMGFSAARTYDLEVWLPGAGAYREISSCSVC 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR R + K + HTLNGSG+AVGR + A+LEN DGSV +P L PY Sbjct: 360 GDFQARRSAIRMK--EGKGTQLVHTLNGSGLAVGRTMAALLENGQQVDGSVKLPAALVPY 417 Query: 417 MN 418 Sbjct: 418 FG 419 >gi|167751430|ref|ZP_02423557.1| hypothetical protein EUBSIR_02426 [Eubacterium siraeum DSM 15702] gi|167655676|gb|EDR99805.1| hypothetical protein EUBSIR_02426 [Eubacterium siraeum DSM 15702] Length = 444 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 142/429 (33%), Positives = 222/429 (51%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+++R+NPE + +KK+ + ++ LD++ R K +++R RN S Q Sbjct: 14 MIDIKFLRENPEAVKENIKKKFQDEKIVLVNEVIELDKELRAAQLKADNLRGDRNKLSKQ 73 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + ++L LEK+E E+ +KK + IPN+ VPIG Sbjct: 74 IGGLMAQGKKDEAEQIKAQVKQFSDELEELEKKEEELGEEVKKRMMIIPNIIDPSVPIGK 133 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A +++G F L G +A L A Sbjct: 134 DDSENVEIKRYGEPVVPDFEVPYHSEIMERFNGIDLDSARRVAGNGFYYLMGDIARLHSA 193 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 194 VLAYARDFMI-DRGFTYCIPPYMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 252 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I E + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 253 IGKFIDTINEEEKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSA 312 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + +D+ R + C+GDL K+YD+E W Q Y E+ SCS Sbjct: 313 MWFDKLWQNTVDLFRSMDIPVRTIECCSGDLADLKVKSYDVEAWSPRQKKYFEVGSCSNL 372 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + K F HTLN + VA R LIA LEN L ADGSV IP VLR Y Sbjct: 373 GDAQARRLKIRVKSKD-KGNYFAHTLNNTVVAPPRMLIAFLENNLCADGSVKIPEVLRKY 431 Query: 417 MNNLAVIKK 425 M + I Sbjct: 432 MGGIDRIVP 440 >gi|256819573|ref|YP_003140852.1| seryl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] gi|256581156|gb|ACU92291.1| seryl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] Length = 423 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 157/426 (36%), Positives = 233/426 (54%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + IR+ + + LKKR+ + + I++LDEK R +++ A+ N+ S +I Sbjct: 1 MLQLNTIREEKDRVLTGLKKRNFKELSLIDDIIALDEKRRSTQLSLDETLAKSNNLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + LK +T+TLKE + L + L L+ +PN+P E VP GTS Sbjct: 61 GNLFKAGETDKANTLKEQTATLKEDIKTLTDTLNTTVEELNDLLYRVPNIPNELVPEGTS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+++ G P + H+E+ + L+DF+ KL+GA F V G A L+RAL Sbjct: 121 EADNVVVFEAGTIPDLGKDALPHWELAKKYDLIDFELGVKLTGAGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T E GY E P +V + + YGTGQ+P M+ D +LIPT+EV +T Sbjct: 181 ITYFLDKNT-EAGYNEYQVPHVVNEASGYGTGQLPDKEGQMYHIGVDNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++ LP+ T P FR EAGS G RG+ R HQF K E+V I + S+ Sbjct: 240 NIFRDTLLNESDLPICCTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDRSYK 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ + IL L L Y ++ LC GDLGF++ TYD EV+ Q + EISS S Sbjct: 300 ALEGMIEHVKGILNELKLPYHILRLCGGDLGFTSAITYDFEVYSTAQEKWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R++D + K+ + HTLNGS +A+ R L ILENY +G + +P VLR Y Sbjct: 360 TFQANRLKLRFKDADGKN-RLAHTLNGSSLALPRVLAGILENYQTPNG-IVVPEVLRKYT 417 Query: 418 NNLAVI 423 +I Sbjct: 418 -GFDII 422 >gi|295837833|ref|ZP_06824766.1| serine-tRNA ligase [Streptomyces sp. SPB74] gi|197698265|gb|EDY45198.1| serine-tRNA ligase [Streptomyces sp. SPB74] Length = 429 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 149/429 (34%), Positives = 239/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + + +L+ DE+ R + +++RA + Q+G Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVELVDSLLAADERRRSSGVRFDELRAEQ----KQLG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + I + L T L + + E+ + + + L+ + N+ +VP+G Sbjct: 57 KLIPKAQGDEKQELLKRTGELAAAVKAADAEQSDAAAQTQDLLRRLGNLVHPDVPVGGEE 116 Query: 120 NEN--ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + ++H E+G LG +D +RA K+SG+RF L+G A LE A Sbjct: 117 DFALLETHGTIRDFAAEGFAPKDHLELGHLLGAIDVERAAKVSGSRFYYLSGIGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I + G+T + P LVR +AM GTG + + D++ D +L+ TSEV+L Sbjct: 177 LVNAAIAQ-ATAAGFTPMLTPALVRPQAMEGTGFLGQAGQDVYHLKDDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EIIE+ LPLR+ +P FR EAGS G+DTRG+ R HQF K E+ + EDS Sbjct: 236 AGYHMDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFTYVAPEDSE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L ++ L L L +RV+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHRRLLEWEKQWLTSLGLPFRVIDVATGDLGSSAARKFDCEAWIPTQGKYRELTSTSDC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R RD K + TLNG+ AV R ++A+LEN+ ADGSV +P VLRPY Sbjct: 356 TEFQARRLSIRMRD--GKKTRPLATLNGTLCAVSRTIVALLENHQQADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|91216110|ref|ZP_01253078.1| seryl-tRNA synthetase [Psychroflexus torquis ATCC 700755] gi|91185627|gb|EAS72002.1| seryl-tRNA synthetase [Psychroflexus torquis ATCC 700755] Length = 423 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 172/426 (40%), Positives = 248/426 (58%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML+++ IR + + ALKKR+ E S E IL+LDE+ R KK+++I NS S +I Sbjct: 1 MLEVKHIRAHQKEYVQALKKRNFEADSVFEAILNLDERRRSTQKKLDEILFESNSLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G +A K +T+ LKE L +E +V + L+ L+ +PN+P VP G S Sbjct: 61 GMLFKSGETEKANAAKEKTAGLKEDSKRLGEEMGDVATELQALLYQVPNIPHPSVPAGKS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N I S G+ P + H+E+ + ++DF+ K++GA F V G A L+RAL Sbjct: 121 EEDNEEIFSEGEIPILSKSALPHWELAKKYDIIDFELGNKITGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T E GY EV PLLV + + YGTGQ+P M+ D +LIPTSEV LT Sbjct: 181 ISYFLDKNT-EAGYNEVQVPLLVNEASGYGTGQLPDKEGQMYHVGNDDLYLIPTSEVPLT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y +++ K LP++ T P FR EAGS G RG+ R HQF K ELV++ + +DS+ Sbjct: 240 NIYRDDLLNFKDLPIQLTAYTPCFRREAGSYGAHVRGLNRLHQFDKVELVNLVKPDDSYQ 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + IL+ L L YR++ LC GDLGF++ T+D E++ Q+ + EISS S Sbjct: 300 VLDTMVEHIKTILRELKLPYRILRLCGGDLGFTSALTFDFELFSTAQDRWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ RY+D ++K HTLNGS +A+ R L ILENY +G + IP VLRPY Sbjct: 360 TFQANRLKIRYKDADNKKA-LIHTLNGSSLALPRVLAGILENYQTDEG-IVIPEVLRPY- 416 Query: 418 NNLAVI 423 I Sbjct: 417 AGFDKI 422 >gi|262277223|ref|ZP_06055016.1| seryl-tRNA synthetase [alpha proteobacterium HIMB114] gi|262224326|gb|EEY74785.1| seryl-tRNA synthetase [alpha proteobacterium HIMB114] Length = 422 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 212/426 (49%), Positives = 291/426 (68%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML+I+ IR NPE+ LKKR+++ IL LD+ R +++ E + RN S + Sbjct: 1 MLNIKDIRLNPENFIQNLKKRNIDDPKKIISNILELDKTYRNFLEQKEKLLNERNIISKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +G+ + + L N+ S +KE++ L+K E S+ +++ +PNVP E+VP+GT Sbjct: 61 LGKNK--DDQKKFNELSNKVSMIKEEIFKLDKITEEKILSINEILMSLPNVPHEDVPVGT 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +NI IR VG+ + H EIGE + +DF+ A K+SG+RF +L +LA LERA Sbjct: 119 DDRQNIEIRKVGQCKVSDK-IMPHDEIGERIKKIDFETAVKISGSRFVILKENLAKLERA 177 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L FM+D+HT E+GYTE S P++V +++MYGTGQ+PKF +D F + +WLIPTSEVSLT Sbjct: 178 LINFMLDVHTEENGYTEYSVPVIVNEKSMYGTGQLPKFKEDQFQLNNNQWLIPTSEVSLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+ S IIE + LPLRF + FR+EAG+AG+DT+GM+RQHQF K E+VSI + E F Sbjct: 238 NMVSESIIEYEKLPLRFVSATQCFRAEAGAAGKDTKGMIRQHQFAKVEMVSIIQPEFRFK 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ERM+ CAE+ILK+L L YRV+ L +GD+GFSA KTYDLEVWL QN YREISSCS+CG Sbjct: 298 ELERMVECAEKILKKLKLPYRVMLLSSGDMGFSAEKTYDLEVWLPSQNKYREISSCSSCG 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ RM +RY+ + K TLNGSG+AVGR ++AILENY NADGS++IP L+ YM Sbjct: 358 TFQANRMRARYKTLD-KKNNLVATLNGSGLAVGRTIVAILENYQNADGSISIPECLKKYM 416 Query: 418 NNLAVI 423 N+ + Sbjct: 417 GNVETL 422 >gi|315225082|ref|ZP_07866899.1| serine--tRNA ligase [Capnocytophaga ochracea F0287] gi|314944765|gb|EFS96797.1| serine--tRNA ligase [Capnocytophaga ochracea F0287] Length = 423 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 157/426 (36%), Positives = 233/426 (54%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + IR+ + + LKKR+ + + I++LDEK R +++ A+ N+ S +I Sbjct: 1 MLQLNTIREEKDRVLTGLKKRNFKELSLIDDIIALDEKRRSTQLSLDETLAKSNNLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + LK +T+TLKE + L + L L+ +PN+P E VP GTS Sbjct: 61 GNLFKAGETDKANTLKEQTATLKEDIKTLTDTLNTTVEELNDLLYRVPNIPNELVPEGTS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+++ G P + H+E+ + L+DF+ KL+GA F V G A L+RAL Sbjct: 121 EADNVVVFEAGTIPDLGKDALPHWELAKKYDLIDFELGVKLTGAGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T E GY E P +V + + YGTGQ+P M+ D +LIPT+EV +T Sbjct: 181 ITYFLDKNT-EAGYNEYQVPHVVNEASGYGTGQLPDKEGQMYHVGVDNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++ LP+ T P FR EAGS G RG+ R HQF K E+V I + S+ Sbjct: 240 NIFRDTLLNESDLPICCTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDRSYK 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ + IL L L Y ++ LC GDLGF++ TYD EV+ Q + EISS S Sbjct: 300 ALEGMIEHVKGILNELKLPYHILRLCGGDLGFTSAITYDFEVYSTAQEKWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R++D + K+ + HTLNGS +A+ R L ILENY +G + +P VLR Y Sbjct: 360 TFQANRLKLRFKDADGKN-RLAHTLNGSSLALPRVLAGILENYQTPNG-IVVPEVLRKYT 417 Query: 418 NNLAVI 423 +I Sbjct: 418 -GFDII 422 >gi|296436275|gb|ADH18449.1| seryl-tRNA synthetase [Chlamydia trachomatis G/9768] gi|296438135|gb|ADH20296.1| seryl-tRNA synthetase [Chlamydia trachomatis G/11074] gi|297140636|gb|ADH97394.1| seryl-tRNA synthetase [Chlamydia trachomatis G/9301] Length = 428 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 170/431 (39%), Positives = 244/431 (56%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ P+ + L+K+ E +L LD+ R L E + A+R S QI + Sbjct: 1 MLDIRLIRKEPKECESRLQKKDPAISLERLLDLDKTVRQLKADSEALLAKRKVLSGQIHK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A DAL E +T+ QL E E + L+ L++ +PN P E+VP+ Sbjct: 61 AKVA--NENADALIQEVNTIANQLVAFETTLQEQEALLEDLMARLPNYPDEDVPVSPDKT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+ G+ P+ + H ++ EAL ++DF K +G+ + LE AL Sbjct: 119 GNQVIKGHGEVPTFPFPPKHHMQLNEALQILDFKLPAKTTGSGWPAYCNEGVLLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 ++++ HG+ PLLV+ + ++G+GQIPKF + +LIPT+EV L Sbjct: 179 YLLNKQ-QAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGDQSLFLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +S EI+ + LPL +T P FR EAG+ G RG++R HQF K E+ + T E Sbjct: 238 GFHSQEILNEQDLPLCYTAFTPCFRREAGAGGAHERGLVRVHQFHKVEMFAFTTPEQEEV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +++ML EEIL L L Y++ L TGD+ F+A KT D EVWL GQ + E+SS S CG Sbjct: 298 VYQKMLHVVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVWLPGQKAFYEVSSISKCG 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR +RYRD K L F +TLNGSG+A R L+AILENY ADGSV IP+VLRPYM Sbjct: 358 DFQARRSETRYRDAQGK-LHFVNTLNGSGLATPRLLVAILENYQQADGSVVIPSVLRPYM 416 Query: 418 NNLAVIKKEHI 428 NN ++ + + Sbjct: 417 NNQEILLPKTV 427 >gi|260060926|ref|YP_003194006.1| seryl-tRNA synthetase [Robiginitalea biformata HTCC2501] gi|88785058|gb|EAR16227.1| seryl-tRNA synthetase [Robiginitalea biformata HTCC2501] Length = 423 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 160/427 (37%), Positives = 237/427 (55%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + +R+NP+ + AL KR ++ P + +L LD++ R L +++ A N+ S +I Sbjct: 1 MLPLHTLRENPDSIAQALGKRGIDAQPMIQEVLELDKQRRTLQTQLDATLAEANTLSREI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G LK ++ LKE L + ++ +L++ + +PN P VP GT Sbjct: 61 GNLFKAGKSEEAQELKARSAKLKESSKALTESLNDAADTLQQALYQVPNAPHTSVPAGTD 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N ++ + G P A + H+E+ L+DF+ K++GA F V G A L+RAL Sbjct: 121 EEDNEVVFTSGDLPQAGGSALPHWELAAQYDLIDFELGVKITGAGFPVYKGKCARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLT 237 F +D +T E GY EV P LV + + GTGQ+P M+ D +LIPT+EV +T Sbjct: 181 VSFFLDRNT-EAGYQEVQVPHLVNEASGLGTGQLPDKEGQMYELRDDKLFLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+ E+++ LPL +T P FR EAGS G RG+ R HQF K E+V + +S+ Sbjct: 240 NMLRDELMDLGDLPLCYTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRVEEPGNSYA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E+M+ + +L L L YR++ LC GDLGF++ TYD EVW A Q + E+SS S Sbjct: 300 ALEQMVEHVKGLLGELGLPYRILRLCGGDLGFTSALTYDFEVWSAAQERWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ RYRD N+K + HTLNGS +A+ R L ILE+Y + G + IP VL PY Sbjct: 360 AFQANRLKLRYRDENNK-PQLAHTLNGSALALPRILACILEDYQDESG-IRIPDVLVPYT 417 Query: 418 NNLAVIK 424 I+ Sbjct: 418 -GFDRIE 423 >gi|326202421|ref|ZP_08192290.1| seryl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325987539|gb|EGD48366.1| seryl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 425 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 147/428 (34%), Positives = 228/428 (53%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++ + + + +++LD + R +++ E +RA RN S Q Sbjct: 1 MLDLRFVRENPEIVKQNIRNKFQDRKLGLVDEVIALDAEMRSTMQEAETLRANRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + + +K + + E+L LE +E E+ +K ++ IPN+ VPIG Sbjct: 61 IGGLMAQGKKAEAEEMKQQVTAQSERLAALEVKETELEEKVKNILMTIPNIIDSSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ H EI E L +D D A K++G F L G +A L A Sbjct: 121 DDSENVEVQRYGEPVVPEFEVPYHTEIMEKLKGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D E G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-ERGFTYCIPPFMIRSEVVTGVMSFAEMEAMMYKIEGEDLFLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + II SLP T+ +P FR E G+ G + RG+ R HQF K E+V + + EDS Sbjct: 240 IGKFIDTIIPETSLPHTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++M ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKMWQNTVDLFRSMDIPVRTLECCSGDLADLKVKSVDIEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N K F HTLN + VA R LIA LEN LNADG+V IP L+PY Sbjct: 360 GDAQARRLKIRVDGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNADGTVNIPVALQPY 417 Query: 417 MNNLAVIK 424 M VIK Sbjct: 418 MGGKTVIK 425 >gi|239942745|ref|ZP_04694682.1| seryl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|239989205|ref|ZP_04709869.1| seryl-tRNA synthetase [Streptomyces roseosporus NRRL 11379] gi|291446211|ref|ZP_06585601.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces roseosporus NRRL 15998] gi|291349158|gb|EFE76062.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces roseosporus NRRL 15998] Length = 425 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 149/429 (34%), Positives = 239/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE R + +++R + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVDLVDALLSADELRRSSGVRFDELRNEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A L + LK + + + E + K+L+ + N+ E+VP+G Sbjct: 61 KA----TPEERTELLKKAEQLKADVKAADAAQDEADADAKRLLLQLGNIVHEDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + ++H E+GE+LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVVLETHGTIRDFGAEGFEPKDHLELGESLGAIDMERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+T + P LVR AM GTG + + A++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFTPMLTPALVRPRAMEGTGFLGQAAENVYHLEKDDYYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII++ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S D+ Sbjct: 236 AAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L ++ L L+L ++V+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHRRLLEWEKQWLTGLELPFQVIDVATGDLGASASRKFDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R RD K ++ TLNG+ AV R ++A+LEN+ DGSV +P VLRPY Sbjct: 356 DGFQARRLSVRMRD--GKKVQPLATLNGTLCAVPRTIVALLENHQLPDGSVRVPEVLRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|170758288|ref|YP_001785859.1| seryl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|169405277|gb|ACA53688.1| serine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 425 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 145/428 (33%), Positives = 224/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++K+ + +++LD + R + + +++RA+RN S Q Sbjct: 1 MLDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRNIKPEADNLRAKRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + + + L LEK E E+ +KK++ IPN+ VPIG Sbjct: 61 IGGLMAQGKKGEAEEVKKQVAAASDHLAELEKRESELEEKIKKIMIIIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIQRYGEPVVPDFEVPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSEVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I SLP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSV 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N K F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 GDAQARRLKIRVAGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPVPLQPY 417 Query: 417 MNNLAVIK 424 M + VIK Sbjct: 418 MGGMTVIK 425 >gi|111021024|ref|YP_703996.1| seryl-tRNA synthetase [Rhodococcus jostii RHA1] gi|122955575|sp|Q0S9E8|SYS_RHOSR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|110820554|gb|ABG95838.1| serine--tRNA ligase [Rhodococcus jostii RHA1] Length = 418 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 150/427 (35%), Positives = 242/427 (56%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NP+ + + + R +P + +L D R + +++RA + + ++G Sbjct: 1 MIDLKFLRENPDAVRESQRTRGEDPALVDALLEADASRRAAVLAGDNLRAEQKAFGKKVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L + L ++ E E+HE ++L I NV E P Sbjct: 61 QASPEERPA----LLEGSKELAAKVKQAEAEQHEAQAALDAAHRAISNVVQEGAP-AGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ + + +VG P+ ++H E+GE+LGL+D +R K+SGARF LTG A L+ + Sbjct: 116 DDFVTLETVGDIPAFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGML 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q +G+ + P+LVR E M GTG + AD+++ D +L+ TSEV L Sbjct: 176 QLAAQ-KAMANGFQMMIPPVLVRPEIMAGTGFLGAHADEVYHLADDDLYLVGTSEVPLAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ P R+ + FR EAGS G+DTRG++R HQF K E+ + + ED+ E Sbjct: 235 YHSGEILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L+ E+L +D+ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 295 HQRLLAWEREMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQQAYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD N K + TLNG+ +A R ++AILEN+ +DG+V +P L P++ Sbjct: 355 FQARRLGVRYRDENGK-PQTAATLNGT-LATTRWIVAILENHQQSDGTVRVPEALVPFV- 411 Query: 419 NLAVIKK 425 V+K Sbjct: 412 GTDVLKP 418 >gi|148907095|gb|ABR16691.1| unknown [Picea sitchensis] Length = 542 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 148/441 (33%), Positives = 226/441 (51%), Gaps = 21/441 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N E + + + R E ++ L E+ L ++E +RA RN + + Sbjct: 104 IDFKWIRDNKEAVALNARNRKSVANVELVVELYEQLCNLQTEVESLRAERNVVA---NRM 160 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + S + L E LK+ L LE++ ++ L++ IPN +VPIG Sbjct: 161 KQKLDPSEREKLIAEGKHLKDNLVALEEDLAQLTDKLQREAQSIPNSTHPDVPIGGEDAA 220 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 L + VG K ++H ++G+ L L DFD A ++SG +F L LE L + Sbjct: 221 -SLRKMVGTKCEFDFPVKDHVDLGQELDLFDFDAAAEVSGTKFYYLKNEAVLLEIGLINW 279 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 + + GYT +S P +VR + G P+ + + L T+E+ + + Sbjct: 280 ALSE-LVKRGYTPLSTPDIVRSSVLEKCGFQPRALNTQVYSIEGTDQCLAGTAEIPVGGM 338 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y +II+ LPL+F + FR+EAG+AG TRG+ R HQF K E+ I R EDS + H Sbjct: 339 YMDQIIDDSLLPLKFVAFSHCFRTEAGAAGYATRGLYRVHQFSKVEMFIICRPEDSDSFH 398 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E ++S E + L LH++ + + + DLG A + YD+E W+ G Y EISS S C ++ Sbjct: 399 EELISIEESLFSSLGLHFKTLDMPSEDLGAPAYRKYDVEAWMPGLGRYGEISSSSNCTDY 458 Query: 360 QSRRMNSRYRD--------------PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 QSRR+N RYR LKF HTLN + AV R +I+ILEN+ DG Sbjct: 459 QSRRLNIRYRPAIEESNPSTVVKPKKRKGQLKFVHTLNATACAVPRMIISILENFQQEDG 518 Query: 406 SVTIPTVLRPYMNNLAVIKKE 426 S+ IP VL+P+M + VI + Sbjct: 519 SIIIPEVLQPFMGGVKVISPK 539 >gi|124022316|ref|YP_001016623.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] gi|166222762|sp|A2C798|SYS_PROM3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123962602|gb|ABM77358.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] Length = 425 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 176/430 (40%), Positives = 259/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NP+ + L +R + + + ++ R L ++ ++A N ++GQ Sbjct: 1 MLDQRLVRDNPDLIANELGRRGMTLDLTGLQLIAQQQRNLEEQRSSLQAEGNRIGKEVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I +G S V L+++ + +K+++ +LE EE ++ + L++ + +PN+P + P G Sbjct: 61 RIQQGSDPKASDVAELRHQGNLIKQKVAVLEDEEKQLSARLREQLLSLPNLPSPDCPEGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+N G KP EH+ I E L L + +R+ +++ +RF L G A LERA Sbjct: 121 DENDNQERHCWG-KPREGKDLLEHWSIAERLNLFETERSVRIAQSRFVTLMGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLHT GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LINFMLDLHT-SKGYREVMPPVLVNTASLTGSGQLPKFAEESFRCAEDDLWLTPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII + LPLR+ +P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 239 TSLHRDEIIPADQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVHPDHSQ 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H ++ + AE +L+ L+L YRV+ LCTGDLGFS+ +TYDLEVWL G +REISSCS C Sbjct: 299 AAHAQITADAEAVLQALELPYRVIELCTGDLGFSSSRTYDLEVWLPGAGAFREISSCSIC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR R +D + HTLNGSG+AVGR + A+LE +DGSV +P L PY Sbjct: 359 GDFQARRSAIRTKDQKG--TRLIHTLNGSGLAVGRTMAALLETGQQSDGSVLLPKALVPY 416 Query: 417 MNNLAVIKKE 426 ++ E Sbjct: 417 F-GKDRLEPE 425 >gi|333025791|ref|ZP_08453855.1| putative serine-tRNA ligase [Streptomyces sp. Tu6071] gi|332745643|gb|EGJ76084.1| putative serine-tRNA ligase [Streptomyces sp. Tu6071] Length = 429 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 150/429 (34%), Positives = 238/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++RA + Q+G Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVGLVDSLLSADERRRSSGVRFDELRAEQ----KQLG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + I + L T L + + E+ + + + L+ + N+ +VP+G Sbjct: 57 KLIPKAQGDEKQELLKRTGELAAAVKAADAEQSDAAAQTQDLLRRLGNLVHPDVPVGGEE 116 Query: 120 NEN--ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + ++H E+G LG +D +RA K+SG+RF L+G A LE A Sbjct: 117 DFALLETHGTIRDFEAEGFAPKDHLELGHLLGAIDVERAAKVSGSRFYYLSGIGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I + G+T + P LVR +AM GTG + + D++ D +L+ TSEV+L Sbjct: 177 LVNAAIAQ-ATAAGFTPMLTPALVRPQAMDGTGFLGQAGQDVYHLKDDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EIIE+ LPLR+ +P FR EAGS G+DTRG+ R HQF K E+ + EDS Sbjct: 236 AGYHMDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFTYVAPEDSE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L ++ L L L +RV+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHRRLLEWEKQWLTSLGLPFRVIDVATGDLGSSAARKFDCEAWIPTQGKYRELTSTSDC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R RD K + TLNG+ AV R ++A+LEN+ ADGSV +P VLRPY Sbjct: 356 TEFQARRLSIRMRD--GKKTRPLATLNGTLCAVPRTIVALLENHQQADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|187777605|ref|ZP_02994078.1| hypothetical protein CLOSPO_01197 [Clostridium sporogenes ATCC 15579] gi|187774533|gb|EDU38335.1| hypothetical protein CLOSPO_01197 [Clostridium sporogenes ATCC 15579] Length = 425 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 144/428 (33%), Positives = 225/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++K+ + + +++LD + R + + + +RA+RN S Q Sbjct: 1 MLDLKFVRENPEVVKENMRKKFQYNKLELVDEVIALDIELRNIKPEADTLRAKRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + + + L LEK E E+ +K+++ IPN+ VPIG Sbjct: 61 IGGLMAQGKKGEAEELKKQVTAASDHLAELEKREGELEEKIKRIMITIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIQRYGEPIVPDFEVPYHTEIMEKFSGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+ P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFIYCIPPFMIRSEVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I+ SLP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTILLEASLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDST 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K F HTLN + VA R LIA LEN LNADGSV IP L+PY Sbjct: 360 GDAQARRLKIRVDGEDGK--YFAHTLNNTVVAPPRMLIAFLENNLNADGSVNIPVALQPY 417 Query: 417 MNNLAVIK 424 M + VIK Sbjct: 418 MGGMTVIK 425 >gi|305665469|ref|YP_003861756.1| seryl-tRNA synthetase [Maribacter sp. HTCC2170] gi|88710225|gb|EAR02457.1| seryl-tRNA synthetase [Maribacter sp. HTCC2170] Length = 423 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 166/426 (38%), Positives = 243/426 (57%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML +Q IR+N + L+IALKKR+++ E ++ LDEK R ++++ A N S +I Sbjct: 1 MLQLQAIRENRDRLEIALKKRNIDATQIFENVVQLDEKRRATQSELDNTLAESNRLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ G + LK +TS LKE+ L +E + L+ L+ IPN+P + VP G S Sbjct: 61 GELFKSGRAQDANVLKEKTSGLKEESKRLGEELNTTAEELQNLLYQIPNIPHDLVPAGNS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+N I G P+ + H+E+ + ++DF+ K++GA F V G A L+RAL Sbjct: 121 ENDNEEIFKEGTVPTLSAEAIPHWELAKKYDIIDFELGVKITGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 + +D +T E GYTE+ PLLV + + YGTGQ+P M+ D +LIPT+EV +T Sbjct: 181 IAYFLDKNT-EAGYTEMQVPLLVNEASGYGTGQLPDKEGQMYHVGADDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ I+ P+ +T P FR EAGS G RG+ R HQF K E+V + S+ Sbjct: 240 NIFRDVILNESDFPICYTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRVEHPSKSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + IL+ L L YR++ LC GDLGF+A TYD EV+ Q+ + EISS S Sbjct: 300 ALDGMVEHVKTILRELKLPYRILRLCGGDLGFTAALTYDFEVFSTAQDRWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +Q+ R+ R++D N K+ HTLNGS +A+ R L ILENY +G + IP VL PY Sbjct: 360 AYQANRLKLRFKDENGKN-NLAHTLNGSSLALPRVLAGILENYQTPEG-IKIPEVLVPYC 417 Query: 418 NNLAVI 423 +I Sbjct: 418 -GFDII 422 >gi|161350042|ref|NP_895201.2| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] gi|46577198|sp|Q7V608|SYS_PROMM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase Length = 425 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 177/430 (41%), Positives = 260/430 (60%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NP+ + L +R + + + ++ R L ++ ++A N ++GQ Sbjct: 1 MLDQRLVRDNPDLIANELGRRGITLDLTGLQLIAQQQRNLEEQRSSLQAEGNRIGKEVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I +G S V L+ + + +K+++ +LE EE ++ + L++ + +PN+P + P G Sbjct: 61 RIQQGSDPKASDVAELRQQGNLIKQKVAVLEDEEKQLSARLREQLLSLPNLPSPDCPEGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+N G KP EH+ I E L L + +R+ +++ +RF L G A LERA Sbjct: 121 DENDNQERHRWG-KPREGKDLLEHWSIAERLKLFETERSVRIAQSRFVTLMGQGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLHT GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LINFMLDLHT-SKGYREVMPPVLVNTASLTGSGQLPKFAEESFRCAEDDLWLTPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII ++ LPLR+ +P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 239 TSLHRDEIIPAEQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVHPDHSQ 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H ++ + AE +L+ L+L YRV+ LCTGDLGFS+ +TYDLEVWL G +REISSCS C Sbjct: 299 AAHAQITADAEAVLQALELPYRVIELCTGDLGFSSSRTYDLEVWLPGAGAFREISSCSIC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR R +D + HTLNGSG+AVGR + A+LE +DGSV +P L PY Sbjct: 359 GDFQARRSAIRTKDEKG--TRLIHTLNGSGLAVGRTMAALLETGQQSDGSVLLPKALVPY 416 Query: 417 MNNLAVIKKE 426 N ++ E Sbjct: 417 FGN-DRLEPE 425 >gi|256389475|ref|YP_003111039.1| seryl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256355701|gb|ACU69198.1| seryl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 425 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 152/429 (35%), Positives = 238/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R +PE + + + R +P + +LS DE R + + + +R + QI Sbjct: 1 MIDLRLLRTDPERVRASQRARGEDPALVDALLSADEARRAAVSRFDTLRNEQKVLGKQIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E AL + L + + E ++HE LK+L + NV ++ VP G Sbjct: 61 KAAGEEK----AALLEQAKKLADGVKAAEADQHEADDVLKQLQLSLSNVVIDGVPEGGED 116 Query: 120 NE--NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + + + R+H E+G+ LG +D +R K+ GAR LTG A LE A Sbjct: 117 DFVLRETVGTPRDFAADGFEPRDHVELGKLLGAIDLERGVKVGGARQYYLTGVGALLEIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + T +G+T + P LV+ EAM GTG + + A++++ T D +L+ TSEV L Sbjct: 177 LLNMAMAQAT-TYGFTPMITPSLVKPEAMAGTGFLGQAAENVYHLTEDDMYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EI+++ LPLR+ + +R EAGS G+DTRG++R HQF K E+ S E++ Sbjct: 236 AAYHMDEILDAAKLPLRYAGYSSCYRREAGSYGKDTRGIIRVHQFEKVEMFSYVLPEEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L +E L L++ +RV+ + GDLG SA + YD E W+ Q YRE++S S C Sbjct: 296 AEHLRLLGWEKEFLTALEIPFRVIDVAAGDLGSSAARKYDCEAWIPTQGKYREVTSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR+ R R + +K TLNG+ A+ R ++AILEN+ NADGSVT+P LRPY Sbjct: 356 TEFQARRLQIRMRGADG--VKPLATLNGTLCAMTRMIVAILENHQNADGSVTVPAALRPY 413 Query: 417 MNNLAVIKK 425 + ++ Sbjct: 414 LGGREKLEP 422 >gi|15605462|ref|NP_220248.1| seryl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX] gi|76789469|ref|YP_328555.1| seryl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|237803159|ref|YP_002888353.1| seryl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|237805080|ref|YP_002889234.1| seryl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|255311560|ref|ZP_05354130.1| seryl-tRNA synthetase [Chlamydia trachomatis 6276] gi|255317861|ref|ZP_05359107.1| seryl-tRNA synthetase [Chlamydia trachomatis 6276s] gi|8928371|sp|O84734|SYS_CHLTR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123606634|sp|Q3KKW5|SYS_CHLTA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|3329186|gb|AAC68324.1| Seryl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX] gi|76167999|gb|AAX51007.1| seryl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|231273380|emb|CAX10295.1| seryl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274393|emb|CAX11188.1| seryl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|296437204|gb|ADH19374.1| seryl-tRNA synthetase [Chlamydia trachomatis G/11222] gi|297748860|gb|ADI51406.1| Seryl-tRNA synthetase [Chlamydia trachomatis D-EC] gi|297749740|gb|ADI52418.1| Seryl-tRNA synthetase [Chlamydia trachomatis D-LC] Length = 428 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 169/431 (39%), Positives = 244/431 (56%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ P+ + L+K+ E +L LD+ R L E + A+R S QI + Sbjct: 1 MLDIRLIRKEPKECESRLQKKDPAISLERLLDLDKTVRQLKADSEALLAKRKVLSGQIHK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A DAL E +T+ +QL E E + L+ L++ +PN P E+VP+ Sbjct: 61 AKVA--NENADALIQEVNTIADQLVAFETTLQEQEALLEDLMARLPNYPDEDVPVSPDKT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+ G+ P+ + H ++ EAL ++DF K +G+ + LE AL Sbjct: 119 GNQVIKGHGEVPTFPFPPKHHMQLNEALQILDFKLPAKTTGSGWPAYCNEGVLLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 ++++ HG+ PLLV+ + ++G+GQIPKF + +LIPT+EV L Sbjct: 179 YLLNKQ-QAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGDQSLFLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +S EI+ + LPL + P FR EAG+ G RG++R HQF K E+ + T E Sbjct: 238 GFHSQEILNEQDLPLCYAAFTPCFRREAGAGGAHERGLVRVHQFHKVEMFAFTTPEQEEV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +++ML EEIL L L Y++ L TGD+ F+A KT D EVWL GQ + E+SS S CG Sbjct: 298 VYQKMLHVVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVWLPGQKAFYEVSSISKCG 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR +RYRD K L F +TLNGSG+A R L+AILENY ADGSV IP+VLRPYM Sbjct: 358 DFQARRSETRYRDAQGK-LHFVNTLNGSGLATPRLLVAILENYQQADGSVVIPSVLRPYM 416 Query: 418 NNLAVIKKEHI 428 NN ++ + + Sbjct: 417 NNQEILLPKTV 427 >gi|268680375|ref|YP_003304806.1| seryl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268618406|gb|ACZ12771.1| seryl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 414 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 186/419 (44%), Positives = 257/419 (61%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ I+ + + + AL+K+ ++ E + ++ + + +E ++A +N+ S G Sbjct: 1 MLDIKLIQNDFDTVATALRKKKVDESLLEELRAISLELKSARLVLEPLQAEQNAKSKLFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 EG V ALK E S KE++ + + L+ L + IPN+P VP G Sbjct: 61 VYAKEGK--DVGALKAELSLNKEKIAEKTEVVRALEEKLEALATIIPNMPSSLVPEGEDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ ++ V + + +EH++I +DF+R KL+ +RFSVL A LERAL Sbjct: 119 NDNVELKRVLEPKTFSFTPKEHWDIDSKQNWIDFERGVKLAKSRFSVLKNDAARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +M+D + G+ EV+ P +V E + GTGQ+PKF DD+F + +LIPT+EV +TN Sbjct: 179 NYMLDFN-RSRGFHEVAVPYIVNRETLMGTGQLPKFEDDLFKIDGEELFLIPTAEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ + LPL+ T + FR EAGSAG+DTRGM+RQHQF K ELVSIT E S T Sbjct: 238 LFRDEILSKEELPLKMTAYSACFRKEAGSAGKDTRGMIRQHQFDKVELVSITTPEQSETV 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E MLSCA ++L L L +R + LC GDLGFSA KT DLEVWL GQN YREISS S + Sbjct: 298 FEEMLSCASDLLSSLGLPHRHLMLCGGDLGFSAAKTVDLEVWLPGQNRYREISSVSNTFD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR R++D + HTLNGS +AVGR LIAI+ENY DGSV IP VL+ YM Sbjct: 358 FQARRAKIRFKDE--GKNRLVHTLNGSSLAVGRTLIAIMENYQQEDGSVAIPEVLKKYM 414 >gi|167766878|ref|ZP_02438931.1| hypothetical protein CLOSS21_01395 [Clostridium sp. SS2/1] gi|167711426|gb|EDS22005.1| hypothetical protein CLOSS21_01395 [Clostridium sp. SS2/1] Length = 432 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 135/430 (31%), Positives = 223/430 (51%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NP+ + +K + + P + ++ LD++NR + ++++ +RA RN S Q Sbjct: 5 MLDIKFLRENPDVVKQNIKNKFQDRKLPLVDQVIELDKENREIKQEVQALRADRNKLSKQ 64 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + + +++ L + E V +K+++ IPN+ VPIG Sbjct: 65 IGALMGQGKKEEAEEVKKQVTASADRIEELSEREKVVEEKIKEIMMTIPNIIDPSVPIGK 124 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI E+ +D D A K++G F L G +A L A Sbjct: 125 DDSENVELERFGEPVVPDFEVPYHTEIMESFDGIDLDSARKVAGNGFYYLMGDIARLHSA 184 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 185 VIAYARDFMI-DRGFTYCVPPFMIRSNVVTGVMSFDEMDAMMYKIEGEDLYLIGTSEHSM 243 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + E LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 244 IGKFIDTTTEEAELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 303 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 304 DWYEKLWKNTVDLFRSMDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 363 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + N F HTLN + VA R LIA LEN L DGSV IP VLRPY Sbjct: 364 GDAQARRLRIRIKGENGN--YFAHTLNNTVVAPPRMLIAFLENNLREDGSVAIPEVLRPY 421 Query: 417 MNNLAVIKKE 426 M ++ + Sbjct: 422 MGGKESLQPK 431 >gi|307721641|ref|YP_003892781.1| seryl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] gi|306979734|gb|ADN09769.1| seryl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] Length = 418 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 182/420 (43%), Positives = 260/420 (61%), Gaps = 5/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ ++++ + + L ++ ++ + E + E+ + E ++A +N+ S + G Sbjct: 1 MIDLKLLQKDFDSISKKLMRKSVDEKLLEKVKIKFEELKEAKANFETLQAAQNAMSKEFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 G + + LK + K ++ + + L+ L IPN+P E+VP G Sbjct: 61 MLKRAGMVHEIPKLKAKVDENKIRIADALEIQRLRQEELEALAMAIPNIPDEDVPDGEDE 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+NI I+ V +EH+E+ E G +DF+R KL+ +RFSV G A LERAL Sbjct: 121 NDNIEIKKVLTPRKFSFTPKEHWELAEQNGWIDFERGVKLATSRFSVSFGMGARLERALI 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FM+D + + G+ EVS P LV +A+ GTGQ+PKF DD++ D +LIPT+EV +TN Sbjct: 181 NFMLDFN-RQRGFDEVSVPALVNRKALEGTGQLPKFEDDLYKIQDQELFLIPTAEVPVTN 239 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY EI+ LP R T FR EAG+AGRDTRGM+RQHQF K ELVSI+ +S Sbjct: 240 LYQDEILSVDELPKRMTAYTSCFRKEAGAAGRDTRGMIRQHQFHKVELVSISTPGESNII 299 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M++CA ++LK L+L +R+V+LCTGDLGFSA KT DLEVWL GQN YREISS S + Sbjct: 300 FDDMVTCASDLLKALELPHRLVTLCTGDLGFSAAKTIDLEVWLPGQNTYREISSVSNTRD 359 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R++ N K + HTLNGS +AVGR L+AI+EN+ NADGS+ IP VL PY+ Sbjct: 360 FQARRAKIRFK--NGKKNELVHTLNGSSLAVGRTLVAIMENFQNADGSIDIPKVLHPYLG 417 >gi|71083670|ref|YP_266390.1| serine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062] gi|123646556|sp|Q4FM02|SYS_PELUB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|71062783|gb|AAZ21786.1| serine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062] Length = 419 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 194/430 (45%), Positives = 267/430 (62%), Gaps = 17/430 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M +I+ IR + E AL KR +E + ILSLDE NR I++ E + + S Sbjct: 1 MHNIKKIRNDVEAFKKALNKRFIEIDVDKILSLDENNRDYIQQRELLEKEKKDISK---- 56 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 S +L ++ + ++ + K + V + L+ ++S IPN+P +VP G N Sbjct: 57 -------SKDQSLFEKSKKITVEIDNISKLQAGVKNELETILSSIPNIPHPDVPTGKDEN 109 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ I G P+ + H+E+GE L ++DFD ATK +G+RF + LA LERAL Sbjct: 110 SNVEISKSGTIPNFKFKPKSHYELGENLNMLDFDLATKTTGSRFVFVKDKLAMLERALSN 169 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----DGRWLIPTSEVS 235 FM+D H + +GY E+S PL+ D MYGTGQ+PKF +D F D ++LIPT+EV Sbjct: 170 FMLDTHVNTNGYEEISPPLIATDATMYGTGQLPKFDNDQFELKLDDSSDRKFLIPTAEVI 229 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTN+ +II+ K LP+R P FR EAGS G+DT+GM+RQHQF+K E+VSI + Sbjct: 230 LTNIVKDQIIDKKKLPMRMVASTPCFRKEAGSYGKDTKGMIRQHQFYKVEMVSIVEIDKC 289 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 E +RM CA +IL L L YR + LCTGD+GFSA KT+D+EVWL ++ YREISSCS+ Sbjct: 290 LPELDRMTDCATKILDLLKLPYRKIVLCTGDMGFSAEKTFDIEVWLPSEDKYREISSCSS 349 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 CG+FQ+RRM +RY++ K TLNGSG+AVGR L+AILENY DGS+ +P L+P Sbjct: 350 CGSFQARRMKARYKNEK-KETVLVGTLNGSGLAVGRTLVAILENYQQEDGSILVPEALKP 408 Query: 416 YMNNLAVIKK 425 YMNN+ I K Sbjct: 409 YMNNIEKIVK 418 >gi|220930544|ref|YP_002507453.1| seryl-tRNA synthetase [Clostridium cellulolyticum H10] gi|220000872|gb|ACL77473.1| seryl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 425 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 149/428 (34%), Positives = 229/428 (53%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++ + + + + ++SLD + R ++ E +RA RN S Q Sbjct: 1 MLDLKFVRENPEIVKQNIRNKFQDKKLGLVDEVISLDSELRSAKQEAEALRANRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + + +K + + E L LE +E+E+ +K ++ IPN+ VPIG Sbjct: 61 IGGLMAQGKKAEAEEMKQQVTAQSECLAALEAKENELEEKVKNVLMAIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ H EI E L +D D A K++G F L G +A L A Sbjct: 121 DDSENVEVQRYGEPVVPDFEVPYHTEIMEKLKGIDLDSARKVAGNGFYYLMGDVARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D ++ G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMINQ-GFTYCIPPFMIRSEVVTGVMSFAEMEAMMYKIEGEDLFLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + II SLP T+ +P FR E G+ G + RG+ R HQF K E+V + + ED Sbjct: 240 IGKFIDTIIPEASLPHTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVVCKPEDGM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +E+M ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 IWYEKMWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDIEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N K F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 GDAQARRLKIRVDGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNQDGSVNIPVALQPY 417 Query: 417 MNNLAVIK 424 M +AVIK Sbjct: 418 MGGMAVIK 425 >gi|284929345|ref|YP_003421867.1| seryl-tRNA synthetase [cyanobacterium UCYN-A] gi|284809789|gb|ADB95486.1| seryl-tRNA synthetase [cyanobacterium UCYN-A] Length = 427 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 190/423 (44%), Positives = 268/423 (63%), Gaps = 7/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ IR+NPE + L R + + + IL+ D + R L +++ + N S I Sbjct: 1 MLDLKKIRENPEIIQTLLNSREPYPKHDLKPILNYDRQQRELEVLRTELQTKSNEISKLI 60 Query: 59 GQAIAEGNL---SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 GQ I G + L+ + ++LK++L LE EE ++ L+ L+ +PN+P+ PI Sbjct: 61 GQKIKNGLDPTVKEISNLREQGNSLKKKLFELEPEEKKIKEKLENLLLQLPNLPVSSAPI 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G ENI ++S G++ H+EI E LG+++ ++A K++ +RF L G A LE Sbjct: 121 GKDETENIEVKSWGEEYLPKIEVLPHWEIAEKLGILEVEKAVKIARSRFVALFGVGAALE 180 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEV 234 RAL +M+D H + GY EV P+LV A+ GTGQ+PKFA++ F D WL PT+EV Sbjct: 181 RALISYMLDQHIAS-GYIEVMPPILVNSNALRGTGQLPKFAEESFFCREDDLWLSPTAEV 239 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 + NLYS+EI+E ++L +R P FR EAGS G+DTRG++R HQF K ELV I +D Sbjct: 240 PVMNLYSNEILEKEALSIRHCAFTPCFRREAGSYGKDTRGLIRLHQFNKVELVKIVHPQD 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S EH+R++ E IL+ L L YR++ LCTGDLGF A K YDLEVWL N YREISSCS Sbjct: 300 SEIEHQRLVENVESILQNLKLPYRILELCTGDLGFGAAKCYDLEVWLPSSNSYREISSCS 359 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 C +FQ+RR N R+R+ K K+ H+LNGSG+AVGR + AILENY ADG++ +P VL+ Sbjct: 360 NCWDFQARRANIRFREKGQKGTKYVHSLNGSGLAVGRTMAAILENYQQADGTIKVPEVLQ 419 Query: 415 PYM 417 PY+ Sbjct: 420 PYL 422 >gi|255349124|ref|ZP_05381131.1| seryl-tRNA synthetase [Chlamydia trachomatis 70] gi|255503661|ref|ZP_05382051.1| seryl-tRNA synthetase [Chlamydia trachomatis 70s] gi|255507340|ref|ZP_05382979.1| seryl-tRNA synthetase [Chlamydia trachomatis D(s)2923] gi|289525773|emb|CBJ15254.1| seryl-tRNA synthetase [Chlamydia trachomatis Sweden2] gi|296435348|gb|ADH17526.1| seryl-tRNA synthetase [Chlamydia trachomatis E/150] gi|296439065|gb|ADH21218.1| seryl-tRNA synthetase [Chlamydia trachomatis E/11023] Length = 428 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 170/431 (39%), Positives = 245/431 (56%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ P+ + L+K+ E +L LD+ R L E + A+R S QI + Sbjct: 1 MLDIRLIRKEPKECESRLQKKDPAISLERLLDLDKTVRQLKADSEALLAKRKVLSGQIHK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A DAL E +T+ +QL E E + L+ L++ +PN P E+VP+ Sbjct: 61 AKVA--NENADALIQEVNTIADQLVAFETTLQEQEALLEDLMARLPNYPDEDVPVSPDKT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+S G+ P+ + H ++ EAL ++DF K +G+ + LE AL Sbjct: 119 GNQVIKSHGEVPTFPFPPKHHMQLNEALQILDFKLPAKTTGSGWPAYCNEGVLLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 ++++ HG+ PLLV+ + ++G+GQIPKF + +LIPT+EV L Sbjct: 179 YLLNKQ-QAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGDQSLFLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +S EI+ + LPL + P FR EAG+ G RG++R HQF K E+ + T E Sbjct: 238 GFHSQEILNEQDLPLCYAAFTPCFRREAGAGGAHERGLVRVHQFHKVEMFAFTTPEQEEV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +++ML EEIL L L Y++ L TGD+ F+A KT D EVWL GQ + E+SS S CG Sbjct: 298 VYQKMLHVVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVWLPGQKAFYEVSSISKCG 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR +RYRD K L F +TLNGSG+A R L+AILENY ADGSV IP+VLRPYM Sbjct: 358 DFQARRSETRYRDAQGK-LHFVNTLNGSGLATPRLLVAILENYQQADGSVVIPSVLRPYM 416 Query: 418 NNLAVIKKEHI 428 NN ++ + + Sbjct: 417 NNQEILLPKTV 427 >gi|255545800|ref|XP_002513960.1| seryl-tRNA synthetase, putative [Ricinus communis] gi|223547046|gb|EEF48543.1| seryl-tRNA synthetase, putative [Ricinus communis] Length = 517 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 144/439 (32%), Positives = 225/439 (51%), Gaps = 19/439 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N E + + +K R+ E +L L EK + K++E +R RN+ + + Sbjct: 82 IDFKWIRDNKEEVALNIKNRNSNANLELVLELYEKMLAVQKEVERLRGERNAVA---NKM 138 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S L +E LKE L LE++ ++ L++ CIPN+ VPIG Sbjct: 139 KGKLEPSERSKLIDEGKNLKEGLMTLEEDMLKLTDELQQEAQCIPNMTHPAVPIGVEDCS 198 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + VG ++H ++G+ L L DFD A ++SG++F L LE AL + Sbjct: 199 TVRKM-VGSPREFSFPVKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVMLEMALVNW 257 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 + + G+T ++ P LVR + G P+ + + LI T+E+ + + Sbjct: 258 TLSE-VMKRGFTPLTTPELVRASVVEKCGFQPRGDNTQVYSIEGSDQCLIGTAEIPVGGI 316 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+ + LPL++ + FR+EAG+AG TRG+ R HQF K E+ + E+S + H Sbjct: 317 HMESILTASMLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKVEMFILCPAEESESHH 376 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E ++ E++ L LH++ + + + DLG A + +D+E W+ G Y EISS S C ++ Sbjct: 377 EELIKIEEDLFSSLGLHFKTIDMASADLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDY 436 Query: 360 QSRRMNSRYR--------DPNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 QSRR+ RYR K KF HTLN + AV R LI +LENY DGSV Sbjct: 437 QSRRLGIRYRPSDPTLRNPKKGKSSLGPTKFVHTLNATACAVPRMLICLLENYQQEDGSV 496 Query: 408 TIPTVLRPYMNNLAVIKKE 426 IP LRP+M L +I + Sbjct: 497 IIPEPLRPFMGGLELIAPK 515 >gi|29840653|ref|NP_829759.1| seryl-tRNA synthetase [Chlamydophila caviae GPIC] gi|33301682|sp|Q821P2|SYS_CHLCV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|29835003|gb|AAP05637.1| seryl-tRNA synthetase [Chlamydophila caviae GPIC] Length = 426 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 171/429 (39%), Positives = 245/429 (57%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ PE +I L+K+ IL LD++ R L E ++++R S QI + Sbjct: 1 MLDIKLIRKAPEECEIRLRKKDPNISLLPILDLDKEVRRLKTDSESLQSQRKLLSTQIHK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G + +E + + L LE E ++L+ L+ +PN P E+VP+ + Sbjct: 61 AKAQG--EDASNMISEVERISQDLEKLEASLEEKNATLQDLLVRLPNYPEEDVPVCPDKS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+SVG P+ + H E+ + L ++DF K SG+ + LE AL Sbjct: 119 GNQVIKSVGALPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVMLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 ++++ EHG+ PLLV+ E ++G+GQIPKF +C +LIPT+EV L Sbjct: 179 YLLNKQ-REHGFQLWLPPLLVKREILFGSGQIPKFDGQYYCVEDGDQSLYLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +S EI K LP+ + P FR EAG+AG + RG++R HQF K E+ + T E + Sbjct: 238 GFHSQEIFNEKDLPIYYAACTPCFRREAGAAGANERGLVRVHQFNKVEMFAFTTPEQADQ 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +E+ML+ E+IL L L YR+ L TGD+ F+A KT D EVWL GQ Y E+SS S C Sbjct: 298 AYEKMLAVVEDILTELKLPYRLSLLSTGDMSFTASKTIDAEVWLPGQQSYYEVSSISQCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQSRR +RY+D K + F HTLNGSG+A R +AILEN DGSV IP VLRPY+ Sbjct: 358 DFQSRRSETRYKDSQGK-MHFIHTLNGSGLATPRLFVAILENNQQKDGSVVIPEVLRPYL 416 Query: 418 NNLAVIKKE 426 N V+ + Sbjct: 417 GNQEVLLPQ 425 >gi|301336273|ref|ZP_07224475.1| seryl-tRNA synthetase [Chlamydia muridarum MopnTet14] Length = 428 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 172/429 (40%), Positives = 245/429 (57%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ P+ + L+K+ E +L LD+K R L + + ARR + S QI + Sbjct: 1 MLDIRLIRKEPKECEARLQKKDPLISLERLLDLDKKVRQLKSDSDALLARRKTLSGQIHK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A L E S + +QL LE E + L+ L++ +PN P E+VP+ + Sbjct: 61 AKVA--KEDATPLIQEVSAIADQLIALENILQEQEALLQDLMARLPNYPDEDVPVSPDKS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+S GK PS + H ++ EAL ++DF K +G+ + LE AL Sbjct: 119 GNQVIKSHGKLPSFTFPPKHHMQLNEALRILDFKLPAKTTGSGWPAYKNTGVLLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLT 237 ++++ HG+ PLLV+ + ++G+GQIPKF + +LIPT+EV L Sbjct: 179 YLLNKQ-QSHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGEQSLFLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +S EI+ + LPL + P FR EAG+ G RG++R HQF K E+ + T E T Sbjct: 238 GFHSQEILNEQDLPLYYAAFTPCFRREAGAGGSHERGLVRVHQFHKIEMFAFTTPEQEET 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +++M+ EEIL L L Y++ L TGD+ F+A KT D EVWL GQN + E+SS S CG Sbjct: 298 AYQKMIGIVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVWLPGQNAFYEVSSISKCG 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR +RYRD K L F +TLNGSG+A R L+AILENY DGSV IP VLRPYM Sbjct: 358 DFQARRSETRYRDAQGK-LHFVNTLNGSGLATPRLLVAILENYQQEDGSVLIPDVLRPYM 416 Query: 418 NNLAVIKKE 426 NN ++ + Sbjct: 417 NNQEILLPK 425 >gi|110003912|emb|CAK98252.1| seryl-trna synthetase protein [Spiroplasma citri] Length = 422 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 276/425 (64%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+ + I +N + + L +RH + + I L + R LI K E ++ +RN S ++G Sbjct: 1 MLEQKGIVENFDEVIKKLNRRHDDFSYLQDIKKLSVQRRELIGKSEKLKEKRNLESKKVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 IAE V K +T+K+++ I++ + EV +K ++ PN+P + VP G Sbjct: 61 TLIAEKKDQEVQKNKKLINTIKQEIEIIDGQLDEVEEKIKAILEVTPNIPDDSVPSGEDK 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ IR GK + +EH+E+ L L+DFDR TK+SG+RF V G A LERAL Sbjct: 121 NDNVEIRKWGKISNHQK-VKEHWEVATKLDLIDFDRGTKISGSRFVVYKGMGAKLERALM 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+D H + GY E+ P+LV+ + MYGTG +PKF +D++ D +LIPTSEV +TN Sbjct: 180 NFMLDEHA-KRGYIEIEPPILVQPQIMYGTGNLPKFKEDLYYIEKDNLYLIPTSEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY EI+E LP+ T P FR E+GSAGRDT+G++R HQF K E+V T EE SF E Sbjct: 239 LYREEILEKDQLPIYHTAYTPCFRQESGSAGRDTKGIIRLHQFKKVEMVKFTTEEASFEE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M+ AE IL+ L++ YRV+ LC+GD+GFS+ KTYD+EVW+ GQN YREISSCS C + Sbjct: 299 LEKMVLDAENILQLLEIPYRVILLCSGDMGFSSTKTYDVEVWMPGQNKYREISSCSNCLD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRM RYRD N +K+ HTLNGSG+A+ R + AILENY N DG++TIP L+PY Sbjct: 359 FQARRMKLRYRDDNE--IKYVHTLNGSGLAIDRLIAAILENYQNEDGTITIPKKLQPYFQ 416 Query: 419 NLAVI 423 N VI Sbjct: 417 NQTVI 421 >gi|91069868|gb|ABE10799.1| seryl-tRNA synthetase [uncultured Prochlorococcus marinus clone ASNC1363] Length = 425 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 173/422 (40%), Positives = 257/422 (60%), Gaps = 8/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + IR+NP ++ +L R I L + + + +I +++ S IGQ Sbjct: 1 MLDQKLIRENPTSVEESLSLRGKVFNISQIQKLTLQKKEIDIEISSLQSESKKLSKLIGQ 60 Query: 61 AIAEGNLS---LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I++ + V+ LK + + + ++ E+++ + ++ K I +PN+P ++ PIG Sbjct: 61 EISKSKNTDSPEVNNLKKKGNEYRIKISEFEEKKRNLDKNIHKEICNLPNLPSKDAPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N+ +++ G PS + H+EIGE+L L D ++TK+S +RF L G+ A LERA Sbjct: 121 DESHNVQLKTWG-DPSVPENLKSHWEIGESLNLFDSVKSTKISKSRFVTLIGNGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSL 236 L FM+D+HT +GY E+ P LV E++ G+GQ+PKF+ + C+ D WL PT+EV L Sbjct: 180 LINFMLDMHT-SNGYLELMPPALVNSESLTGSGQLPKFSNESFKCSNDDLWLSPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T + ++II+ K LPL++ +P FR EAGS GRDT+G++R HQF K EL S Sbjct: 239 TAFHRNDIIDPKKLPLKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYWFCEPSKSI 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++ AE ILK+L+L YR++ +CTGDLGFS+ +TYDLEVWL YREISSCS C Sbjct: 299 EAHKKITLDAESILKKLNLPYRLIDICTGDLGFSSSRTYDLEVWLPSSKCYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + R + K + HTLNGSG+A+GR + AILEN DGSV IP L PY Sbjct: 359 LDFQARRSSIRAKI--DKKNTYLHTLNGSGLAIGRTMAAILENGQQTDGSVKIPDALVPY 416 Query: 417 MN 418 Sbjct: 417 FG 418 >gi|166154071|ref|YP_001654189.1| seryl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|166154946|ref|YP_001653201.1| seryl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335275|ref|ZP_07223519.1| seryl-tRNA synthetase [Chlamydia trachomatis L2tet1] gi|238687414|sp|B0BAI4|SYS_CHLTB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238687427|sp|B0B8V5|SYS_CHLT2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|165930059|emb|CAP03542.1| seryl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|165930934|emb|CAP06496.1| seryl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 428 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 170/431 (39%), Positives = 245/431 (56%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ P+ + L+K+ E +L LD+ R L E + A+R S QI + Sbjct: 1 MLDIRLIRKEPKECESRLQKKDPAISLERLLDLDKTVRQLKADSEALLAKRKVLSGQIHK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A DAL E +T+ +QL E E + L+ L++ +PN P E+VP+ Sbjct: 61 AKVA--NENADALIQEVNTIADQLVAFETTLQEQEALLEDLMARLPNYPDEDVPVSPDKT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+S G+ P+ + H ++ EAL ++DF K +G+ + LE AL Sbjct: 119 GNQMIKSHGEVPTFPFPPKHHMQLNEALQILDFKLPAKTTGSGWPAYCNEGVLLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 ++++ HG+ PLLV+ + ++G+GQIPKF + +LIPT+EV L Sbjct: 179 YLLNKQ-QAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGDRSLFLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +S EI+ + LPL + P FR EAG+ G RG++R HQF K E+ + T E Sbjct: 238 GFHSQEILNEQDLPLCYAAFTPCFRREAGAGGAHERGLVRVHQFHKVEMFAFTTPEQEEV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +++ML EEIL L L Y++ L TGD+ F+A KT D EVWL GQ + E+SS S CG Sbjct: 298 VYQKMLHVVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVWLPGQKAFYEVSSISKCG 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR +RYRD K L F +TLNGSG+A R L+AILENY ADGSV IP+VLRPYM Sbjct: 358 DFQARRSETRYRDAQGK-LHFVNTLNGSGLATPRLLVAILENYQQADGSVVIPSVLRPYM 416 Query: 418 NNLAVIKKEHI 428 NN ++ + + Sbjct: 417 NNQEILLPKTV 427 >gi|227486613|ref|ZP_03916929.1| serine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227235431|gb|EEI85446.1| serine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 429 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 140/430 (32%), Positives = 216/430 (50%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ +R+NP+ + +KK+ + + +L LDEK R + + +R+ RN S + Sbjct: 1 MIDIKLLRENPDFVKENIKKKFQDEKLVLVDEVLELDEKLRSYKTEGDRLRSERNKTSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + ++L +E+E + +KK + IP + E VP+G Sbjct: 61 IGALMGQGKKEEAEKVKAHVVEINDELVHIEEETARLNEEVKKRMQVIPQIIDETVPLGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 EN+ I G+ H +I E+ +D D + SGA F L G +A L A Sbjct: 121 DDTENVEIERFGEPVVPDFEVPYHIDIMESFDGIDLDSSRNTSGAGFYYLKGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + GYT P ++R E + G + D M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGYTYFVPPFMIRSEVVTGVMSFAEMQDMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + I E + +PL+ T+ +P FR E G+ G + RG+ R HQF K E+V I + EDS Sbjct: 240 IGKFINTINEEEKMPLKMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + + E + L++ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 KLYNELWQNTVEFFRSLEIPVRTLECCSGDLADLKVKSCDVEAWSPRQEKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R + F HTLN + VA R LIA LEN L ADGSV IP L+ Y Sbjct: 360 GDAQARRLGIRLRGEDGN--YFAHTLNNTVVAPPRMLIAFLENLLQADGSVKIPAPLQMY 417 Query: 417 MNNLAVIKKE 426 M I Sbjct: 418 MGGKDKIVPT 427 >gi|189183335|ref|YP_001937120.1| seryl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] gi|238692234|sp|B3CQX9|SYS_ORITI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189180106|dbj|BAG39886.1| seryl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] Length = 429 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 277/425 (65%), Gaps = 2/425 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR NP+ LD +L KR ++ S+ I+ +D + R LI I+ ++ R S+ + Sbjct: 1 MLDIKWIRANPDKLDESLSKRGIDSVSKSIIHIDSEKRTLISLIQKLQHERKEKSSSVAH 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 I + + + + ++N+ + +++ LE L +++ +PN+ ++VP + + Sbjct: 61 -IYDKSSTDFEEIQNDVKLINQKITELETSLLHHEKRLSEIMDNLPNLVADDVP-YGTNS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + + I + H+EIG+ LG+MDF+ ATK+SG+RF +L LA LERAL Sbjct: 119 DMNKVLKECGTIQNIKFPKHHYEIGKNLGMMDFNTATKMSGSRFVILKHDLAKLERALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT+E + EVS P LV+D AMY GQ+PKFAD F TT G LIPT+EV LTN++ Sbjct: 179 FMIDVHTTEFNFFEVSPPCLVKDHAMYNVGQLPKFADASFETTTGYRLIPTAEVPLTNIF 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++ + + LP+R P FRSE GSAG+D +GMLR HQF K EL +I ++S E E Sbjct: 239 ANTTLLEEKLPIRLVAFTPCFRSEVGSAGKDVKGMLRMHQFGKVELFTIATPKESNREFE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + AE+IL++L L YRVV LC+GD+GF+A KTYDLEVWL QN YREISSCS +FQ Sbjct: 299 YLTAAAEKILEKLGLPYRVVLLCSGDIGFAAHKTYDLEVWLPAQNCYREISSCSHFSSFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RR S+YR+ SK + F HT+NGSG+AVGR +IAILENY N+DGSVTIP LR YM Sbjct: 359 ARRSLSKYRELCSKKVNFLHTINGSGLAVGRTIIAILENYQNSDGSVTIPEKLRNYMGGQ 418 Query: 421 AVIKK 425 +I Sbjct: 419 KLITP 423 >gi|292656050|ref|YP_003535947.1| seryl-tRNA synthetase [Haloferax volcanii DS2] gi|291371684|gb|ADE03911.1| seryl-tRNA synthetase [Haloferax volcanii DS2] Length = 460 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 173/445 (38%), Positives = 248/445 (55%), Gaps = 22/445 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D Q +R PE + AL R++ + + +L + ++ R L + +D+R RN S QIG Sbjct: 1 MIDRQLLRDEPERVRDALAARNMEDVDIDRVLDVYDEWRSLKAEGDDLRHERNEVSQQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GT 117 Q EG + + LKE+L LE E+ + L + + +PN+P E VP+ Sbjct: 61 QLKQEGKDEEAQEAIDRSGELKEELQELETRADELEAELDEALMELPNLPHESVPVGADE 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 NE + H+++GE L ++D RA K +G+ F L G A LE A Sbjct: 121 DDNEEVRRVGFDDLRELPDEVTPHYDLGEELDIIDEGRAAKTTGSGFYFLKGEGAMLEHA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWL 228 L QFM+D+H E Y ++ P+ V+ +M GTGQ+PKFA+D + D WL Sbjct: 181 LVQFMLDVH-REQEYVDLFPPIPVKTTSMEGTGQLPKFAEDAYRIGGAETENYDDDDLWL 239 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 PT+EV +TN+Y EI+ LPL+ P+FR EAG G +TRG++R HQF K ELV+ Sbjct: 240 CPTAEVPVTNMYRDEILLKDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVN 299 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---- 344 ++S+ E ++ A E+L RL L YRV+SLCTGDL F++ KTYDLEVW G Sbjct: 300 FVEPDESYDRLEALVDEAAEVLDRLGLPYRVLSLCTGDLTFASAKTYDLEVWAPGTESED 359 Query: 345 -----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 + E+SS S +FQ+RR RYR +S ++ HTLN SG AVGR ++A+LE Sbjct: 360 APEQGGRWLEVSSASNFEDFQARRAGLRYRPERHESAEYLHTLNASGTAVGRVMVALLEY 419 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIK 424 Y N DG+V +P L+PYM VI+ Sbjct: 420 YQNEDGTVDVPEPLQPYMGGREVIE 444 >gi|326335021|ref|ZP_08201221.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692826|gb|EGD34765.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 423 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 161/426 (37%), Positives = 228/426 (53%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I +IR N + + LKKRH E L LDEK R +++ + A+ N S +I Sbjct: 1 MLQISYIRDNKDKVINGLKKRHFSEIELIEKSLDLDEKRRATQAELDQVLAQSNKLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + EG K +T KE L EV L +++ IPNVP E VP G S Sbjct: 61 GVLMKEGKKEEAQKAKEKTVQYKELTKNLSTTLDEVTEQLTQILYRIPNVPNEIVPQGKS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N+ + G+ P + H+E+ + ++DF+ KL+GA F V G A L+RAL Sbjct: 121 AEDNLTVFRSGEIPHLFEGALPHWELAKKYNIIDFELGVKLTGAGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 + +D +T GY E P +V + + YGTGQ+P M+ D +LIPT+EV +T Sbjct: 181 ISYFLDKNT-SAGYQEYQVPHMVNEASGYGTGQLPDKEGQMYHVQLDNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++ LP+ T P FR EAGS G RG+ R HQF K E+V I + S+ Sbjct: 240 NIFRDTLLSENDLPICCTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDRSYQ 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 ++M+ + IL L L YR++ LC GDLGF++ TYD EV+ Q + EISS S Sbjct: 300 ALDQMIEHVKGILNELKLPYRILRLCGGDLGFTSAITYDFEVYSTAQEKWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R+R+ K + HTLNGS +A+ R L ILENY +G + IP VLR Y Sbjct: 360 TFQANRLKLRFRNGEGK-PQLVHTLNGSSLALPRVLAGILENYQTLEG-IVIPEVLRKYT 417 Query: 418 NNLAVI 423 +I Sbjct: 418 -GFEII 422 >gi|297623943|ref|YP_003705377.1| seryl-tRNA synthetase [Truepera radiovictrix DSM 17093] gi|297165123|gb|ADI14834.1| seryl-tRNA synthetase [Truepera radiovictrix DSM 17093] Length = 426 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 161/425 (37%), Positives = 247/425 (58%), Gaps = 9/425 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD ++IR++ + A++ + L + +L LDE+ R+L +E +A RN++S + Sbjct: 1 MLDPRFIREHETRVRKAIRDKGLPEAERALDQVLLLDEEYRLLRSDLEAKQAERNASSKR 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ G + L STL +++ LE+ + + L+ + +PN+P E VP G Sbjct: 61 IGELKRRG--ESAEELIRAMSTLSDEVKRLEERSRSLEAQLQGALLELPNLPHESVPYGV 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S ++N+++ G KP+ + H+E+ A G +D + K +GA F V G A L RA Sbjct: 119 SEHDNVVVHERGDKPTFDFEPKPHWELAAARGWLDLEAGVKTTGAGFPVFKGPGARLLRA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L + ++ GYTEV+ PLLV E+ TGQ+P M+ DG +LIPTSE++LT Sbjct: 179 LNTYCLN-ALVAAGYTEVAVPLLVNAESATATGQLPDKEGQMYELRDGFYLIPTSELALT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+ EI+++ LPLR+ P FR EAGS G RG+ R HQF K E+V T + SF Sbjct: 238 NLHRGEILDAAELPLRYAAQTPCFRREAGSYGAHVRGVNRVHQFDKVEMVQFTHPDRSFE 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M + AE +L+ L + YR + +CTGD+GF+ K YDLEVW AGQ + E+SS S Sbjct: 298 ALEEMAAFAESLLETLGMPYRRLLMCTGDMGFTQAKKYDLEVWSAGQGRWLEVSSVSNIT 357 Query: 358 NFQSRRMNSRYRDPNSK---SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR+ +R+R+ ++ + HTLNGS + R A+LEN + DG+V++P L+ Sbjct: 358 DFQARRLGTRFREGGAQGRGKPELVHTLNGSAFGMVRLFAALLENAQHEDGTVSVPEPLQ 417 Query: 415 PYMNN 419 PY+ Sbjct: 418 PYVGG 422 >gi|62185467|ref|YP_220252.1| seryl-tRNA synthetase [Chlamydophila abortus S26/3] gi|81312384|sp|Q5L4Z0|SYS_CHLAB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|62148534|emb|CAH64305.1| seryl-tRNA synthetase [Chlamydophila abortus S26/3] Length = 424 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 166/428 (38%), Positives = 242/428 (56%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ PE + L+K+ + IL LD++ R L + E ++++R S QI + Sbjct: 1 MLDIKLIRKAPEECETRLRKKDPLISLQPILDLDKEIRHLKTETEALQSQRKLLSNQIHK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A+G V ++ + + + L LE + S+L+ ++ +PN P E+VP+ Sbjct: 61 AKAQG--EDVSSMMDNVERISQDLAKLEPLLEQKESTLQDMLVRLPNYPDEDVPVCPDKT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+ VG P+ + H E+ + L ++DF K SG+ + LE AL Sbjct: 119 GNQVIKQVGALPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVCLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLT 237 ++++ EHG+ PLLV+ E ++G+GQIPKF + +LIPT+EV L Sbjct: 179 YLLNKQ-REHGFQLWLPPLLVKHEILFGSGQIPKFDGQYYRVEDGEQSLYLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +S EI K LP+ + P FR EAG+AG RG++R HQF K E+ + T + + Sbjct: 238 GFHSQEIFSEKDLPIYYAAFTPCFRREAGAAGAHERGLVRVHQFHKVEMFAFTTPDQADQ 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +E+ML+ E+IL L L YR+ L TGD+ F+A KT D EVWL GQ Y E+SS S C Sbjct: 298 AYEKMLAVVEDILTELQLPYRLSLLSTGDMSFTASKTIDAEVWLPGQQSYYEVSSISQCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQSRR +RY+D K + F HTLNGSG+A R +AILEN DGSV IP VLRPY+ Sbjct: 358 DFQSRRSETRYKDNRGK-MHFVHTLNGSGLATPRLFVAILENNQQEDGSVIIPEVLRPYL 416 Query: 418 NNLAVIKK 425 N V+ Sbjct: 417 ENQEVLLP 424 >gi|225629896|ref|YP_002726687.1| seryl-tRNA synthetase [Wolbachia sp. wRi] gi|225591877|gb|ACN94896.1| seryl-tRNA synthetase [Wolbachia sp. wRi] Length = 432 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 214/427 (50%), Positives = 293/427 (68%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI++IR+NPE + A+K R + E +E IL +D + R L K++D+ +RN + +I Sbjct: 8 MHDIEYIRKNPEGFEKAMKSRGIRESTAEEILEIDHEKRSLTTKLQDLNRQRNEITEEIK 67 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + S + + ++ ++ + +E L ++S +PN+P ++VPIG Sbjct: 68 KLKMS--KSPCEEQIELSKSITNEIEAISLKEQAEKDKLVNVLSNLPNIPAQDVPIGADE 125 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N N+ +R G K + H+E+GE LGL+DF++A ++SG+RF++L G LA L RAL Sbjct: 126 NSNLEVRRYGGKRQFDFVPESHYELGEKLGLIDFEQAARISGSRFTILKGQLAKLGRALI 185 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 M+++H +E GYTEV P LV++EAMY GQ+PKF+DD + TTD LIPTSEV LTNL Sbjct: 186 NCMLEMHVNEFGYTEVYHPALVKNEAMYNVGQLPKFSDDSYLTTDELRLIPTSEVFLTNL 245 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + +I+E K LP+RFT + FR EAGSAGRDTRGM+RQHQF K ELVSIT E+ S E Sbjct: 246 VADKIMEEKELPIRFTAYSECFRKEAGSAGRDTRGMIRQHQFGKVELVSITTEDQSNDEL 305 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ERM S AEEILK+L+L YRV+ LC+GD+GF+A +TYD+EVWL GQN YREISSCS CG F Sbjct: 306 ERMTSVAEEILKKLELPYRVMLLCSGDMGFAAQRTYDIEVWLPGQNKYREISSCSNCGAF 365 Query: 360 QSRRMNSRYRDPNSKS-LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RRMN++Y K K+ HTLNGS +A+GR +IAI+ENY N+DGS+ IP VL+ YM+ Sbjct: 366 QARRMNAKYSSETDKKIKKYVHTLNGSALAIGRTIIAIMENYQNSDGSIAIPNVLQKYMS 425 Query: 419 NLAVIKK 425 N VI K Sbjct: 426 NDTVISK 432 >gi|89897924|ref|YP_515034.1| seryl-tRNA synthetase [Chlamydophila felis Fe/C-56] gi|123483891|sp|Q255Z9|SYS_CHLFF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|89331296|dbj|BAE80889.1| seryl tRNA synthetase [Chlamydophila felis Fe/C-56] Length = 426 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 168/429 (39%), Positives = 236/429 (55%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ PE + L+K+ IL+LD++ R L E +++++ S QI Q Sbjct: 1 MLDIKLIRKAPEECETRLRKKDPSISLLPILNLDKEVRQLKTDSESLQSQKKLLSRQIHQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + E + ++L LE E ++L+ L+ +PN P E+VPI Sbjct: 61 TKA--RNEDASDMIGEVERISQELTRLEALLEEKDAALQNLLVRLPNYPDEDVPISPDKT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+SVG + + H E+ + L ++DF K SG+ + LE AL Sbjct: 119 GNRVIKSVGSPSTFSFPPKHHLELNQKLQILDFKLPGKTSGSGWPAYKNRGVLLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 +++ HG+ PLLV+ E ++G+GQIPKF + +LIPT+EV L Sbjct: 179 YLLQKQ-QSHGFQLWLPPLLVKREILFGSGQIPKFDGQYYRVEDGDQSLYLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +S EI K LP+ + P FR EAG+AG RG++R HQF K E+ + T E + Sbjct: 238 GFHSQEIFNEKDLPIYYAACTPCFRREAGAAGAHERGLVRVHQFHKVEMFAFTTPEQADQ 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +E+MLS EEIL L L YR+ L TGD+ F+A KT D EVWL GQ Y E+SS S C Sbjct: 298 AYEKMLSIVEEILTELKLPYRLSLLSTGDMSFTASKTIDAEVWLPGQKSYYEVSSISQCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQSRR +RY+D K + F HTLNGSG+A R +AILEN DGSV IP VLRPY+ Sbjct: 358 DFQSRRSETRYKDSQGK-MHFVHTLNGSGLATPRLFVAILENNQQEDGSVIIPEVLRPYL 416 Query: 418 NNLAVIKKE 426 N V+ + Sbjct: 417 GNQEVLSAQ 425 >gi|183601984|ref|ZP_02963353.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219682896|ref|YP_002469279.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|241190472|ref|YP_002967866.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195878|ref|YP_002969433.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254783007|sp|B8DW52|SYS_BIFA0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|183218869|gb|EDT89511.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219620546|gb|ACL28703.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|240248864|gb|ACS45804.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250432|gb|ACS47371.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178199|gb|ADC85445.1| Seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BB-12] gi|295793459|gb|ADG32994.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9] Length = 428 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 144/431 (33%), Positives = 234/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++PE + + +KR + + +L DE+ R +K+ E+ RAR+ Q+ Sbjct: 1 MLDIQFIREHPEVVKESQRKRGESVELVDEVLRADEERRSSLKQFEEARARQKEIGKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L +T L EQ+ + + + N+ + P G Sbjct: 61 KAAPDEK----AKLIAQTKELSEQVASFKASADTADEQYTTAMWQLSNIVEPQAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +GE + +D R K+SG+RF L G +A L+ A Sbjct: 117 DYVVMRKVGQIRDFAAEGFEPKDHLTLGEEVAGIDMKRGVKVSGSRFYFLRGDVARLQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+ P LVR E M GTG + AD+++ D +L+ TSEV+ Sbjct: 177 MLTMAVD-QAQEHGFILAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDDYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ PLR+ + +R EAG+AG+DT G++R HQF K E+ + E+S Sbjct: 236 LAGMHENEILDLSDGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKPENS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++L+ EE+L ++++ YRV+ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 DAEHQKLLAMEEEMLAKVEVPYRVIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + TLNG+ +A R L+AILEN+ ADGS+ IP +RP Sbjct: 356 CTQYQARRLNIRERVADGG-TSPVATLNGT-LATTRWLVAILENHQQADGSIEIPKAMRP 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPR 424 >gi|172039818|ref|YP_001799532.1| seryl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] gi|171851122|emb|CAQ04098.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 446 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 150/428 (35%), Positives = 235/428 (54%), Gaps = 9/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + + R +P + +L D + R I + RA + + S +G Sbjct: 25 MIDLKLLRENPDLVRESQRTRGEDPALVDQLLEADRQRREAISAADQARAEQKAFSKAMG 84 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q +A + L+ E + + LE + +L L I NV Sbjct: 85 QKMAAASDEEKAQLREEGKQKAQAVKDLEATQSAAEQALHDLQMQISNVVEGAP--AGGE 142 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +++ VG+ + ++H E+GE+LGL+D R TK+SG+RF LTG A L+ + Sbjct: 143 EDFVVLEHVGEPTTFDFEPKDHLELGESLGLIDMKRGTKVSGSRFYFLTGDGALLQLGMM 202 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q T E G+ + P+LVR E M GTG + AD+++ D +L+ TSEV+L Sbjct: 203 QLAARKAT-EKGFQLMIPPVLVRPEVMGGTGFLGAHADEVYRLEEDDLYLVGTSEVALAG 261 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EII+ P R+ + FR EAGS G+DTRG++R HQF K E+ R E + Sbjct: 262 YHSDEIID-LDEPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKLEMFVYCRPEQATEI 320 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ +L +++L +D+ YRV+ GDLG SA + +D E W+ QN YRE++S S C Sbjct: 321 HQELLQLEKDMLAAIDVPYRVIDTAGGDLGSSAARKFDTEAWVPTQNTYRELTSTSNCTT 380 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD + K + TLNG+ +A R L+AILEN+ ADGSV +P LRP++ Sbjct: 381 FQARRLQTRYRDADGK-TQVAATLNGT-LATTRWLVAILENHQQADGSVVVPEALRPFV- 437 Query: 419 NLAVIKKE 426 V+ + Sbjct: 438 GKDVLTPK 445 >gi|150024186|ref|YP_001295012.1| seryl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86] gi|149770727|emb|CAL42191.1| Serine--tRNA ligase [Flavobacterium psychrophilum JIP02/86] Length = 423 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 155/426 (36%), Positives = 233/426 (54%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I +IR+N E + AL KR ++ + ++ +DEK R +++ I + NS S +I Sbjct: 1 MLQIAFIRENQEKVIKALAKRSIDATSIVQEVVQIDEKRRATQVELDTILSESNSISKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + G ALK + +T KE+ L + + L + +PN+P + VP G + Sbjct: 61 GDLMKSGEKEKATALKEKIATNKEKTKELSEITETLAKDLLDKLYTLPNLPADIVPEGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN+ I G P ++ H+E+ + ++DF+ TK++ F V G A L+RAL Sbjct: 121 PEENLNIFQEGDIPVLHEEAQPHWELIKKYDIVDFELGTKITAPGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 + +D +T + GY E P +V + + YGTGQ+P M+ D +LIPT+EV +T Sbjct: 181 ISYFLDKNT-DAGYQEYQVPHMVNEASAYGTGQLPDKEGQMYHDAKDNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ I+ LP+ T P FR EAGS G RG+ R HQF K E+V I + S+ Sbjct: 240 NIFRDVILNENELPVLCTGYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVRIEHPDKSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ + IL+ L L YR++ LC GD+GF++ TYD EV+ Q+ + EISS S Sbjct: 300 ALEGMVEHVKSILQELKLPYRILRLCGGDMGFASALTYDFEVFSTAQDRWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQS R+ R++D K+ + HTLNGS +A+ R L ILENY +G + IP VLR Y Sbjct: 360 TFQSNRLKLRFKDKEGKN-QLAHTLNGSSLALPRVLAGILENYQTPEG-IVIPEVLRKYT 417 Query: 418 NNLAVI 423 +I Sbjct: 418 -GFDII 422 >gi|310828864|ref|YP_003961221.1| hypothetical protein ELI_3296 [Eubacterium limosum KIST612] gi|308740598|gb|ADO38258.1| hypothetical protein ELI_3296 [Eubacterium limosum KIST612] Length = 426 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 136/428 (31%), Positives = 217/428 (50%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ +R NPE + ++K+ + + ++ +D K R + + +RA+RN+ S Q Sbjct: 1 MLDIKLLRTNPELVKENIRKKFQDEKLVLVDEVVEMDRKYRDSKTEGDTLRAQRNTISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +++G + K + + +QL LE E ++ +++ + IPN+ VPIG Sbjct: 61 IGGFMSKGQKDEAEKAKAQVVEINKQLEELEALEAKLEGDIRERMLVIPNIIDPSVPIGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ + H +I E +D D A K SG F L+G +A L Sbjct: 121 DDSENVEVERFGEPVVPEYEVPYHIDIMEKFNGVDLDSARKTSGNGFYYLSGDIARLHSG 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + + G + + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYYIPPFMIRSDVVTGVMSFSEMENMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I++ LP T+ +P FR E GS G + RG+ R HQF K E++ + EDS Sbjct: 240 IGKFIGTILDENQLPQTLTSYSPCFRKEVGSHGIEERGVYRIHQFEKQEMIVVCEPEDSM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ER+ + + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFERLYTNTVDFFRTLDIPVRTLECCSGDLADLKVKSIDVEAWSPRQQKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R K F HTLN + VA R LIA LEN +N DG++ IP LR Y Sbjct: 360 GDAQARRLGIRVRSKE-KGKYFAHTLNNTVVAPPRMLIAFLENNINEDGTINIPEPLRMY 418 Query: 417 MNNLAVIK 424 M I+ Sbjct: 419 MGGKEKIQ 426 >gi|229825079|ref|ZP_04451148.1| hypothetical protein GCWU000182_00429 [Abiotrophia defectiva ATCC 49176] gi|229790451|gb|EEP26565.1| hypothetical protein GCWU000182_00429 [Abiotrophia defectiva ATCC 49176] Length = 428 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 139/430 (32%), Positives = 230/430 (53%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NP+ + ++ + + P ++ LDEK+R L K + +RA +N S Q Sbjct: 1 MLDIRFVRENPDAVKQNIRNKFQDDKLPLVNEVIELDEKSRELKTKGDILRAEKNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK S ++L +EKE+ E+ +KK++ IPN+ VPIG Sbjct: 61 IGACMAQGMKDEAEELKRRVSADAKELEAMEKEQAELDEKIKKIMMTIPNIIDASVPIGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N+ ++ G+ H +I E+ +D + A +++G F L G +A L A Sbjct: 121 DDSQNVEVQKFGEPKVPDFEIPYHTQIMESFNGIDLESAGRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 VLSYARDFMI-DRGFTYCVPPFMIRSDVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +++ +SLP +FT+ +P FR E G+ G + RG+ R HQF K E++ + + E++ Sbjct: 240 IGRFIDRMLDEESLPQKFTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEEAM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++M ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 KWYDKMWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQQKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R+ N F TLN + A R LIA LEN LN DGSV IP VLRPY Sbjct: 360 GDAQARRLRIRVRNKNGN--YFATTLNNTVAAPPRMLIAFLENNLNEDGSVNIPEVLRPY 417 Query: 417 MNNLAVIKKE 426 M + + Sbjct: 418 MGGKEKLVPK 427 >gi|71892162|ref|YP_277894.1| seryl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123640954|sp|Q492S4|SYS_BLOPB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|71796268|gb|AAZ41019.1| seryl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 428 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 176/429 (41%), Positives = 249/429 (58%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D +R N + + L +R + +IL KK E ++ R + + IG Sbjct: 1 MIDPNLLRSNLDLVAKKLARRKFILNINKFRQQESLRKILQKKTESLQTERKAKAKIIGV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + G V+ L E L ++L L+ E E+ + +K+ +PN+P ++VP G Sbjct: 61 AKSRG--ENVEFLCQEAYVLGKKLTSLKLENKELKNRIKQFELSLPNIPDDQVPYGFRDQ 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I GK R+H +G +DF ATKL+G+RF V+ G +AHL RAL Q Sbjct: 119 DNLEIMRWGKPGQYNFPIRDHVALGALTNGLDFSNATKLTGSRFIVMKGQIAHLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEV 234 FMIDLH HGY E P LV +++YG GQ+PKF +D+F LIPT+EV Sbjct: 179 FMIDLHVKRHGYEEYYLPYLVNQDSLYGAGQLPKFYEDLFHIQHLQSGTNPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 L NL I++ + LP++ P FR EAGS G TRG++R HQF K E+V + + Sbjct: 239 PLINLVRDVILDEEELPIKMVAHTPCFRYEAGSYGHHTRGLIRMHQFDKVEMVQVVHPDK 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E + S AE++L+ L L YR + LCTG++GFS+CKTYDLEVWL N Y E+SSCS Sbjct: 299 SMQILEEITSHAEQVLQLLKLPYRKILLCTGNIGFSSCKTYDLEVWLPAYNAYCEVSSCS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 G+FQ+RR+ +RY+ ++ + HTLN SGVA+GR L A+LENY DG V IP+VL Sbjct: 359 NVGDFQARRIRARYKGRMNRKARLLHTLNASGVAIGRALAAVLENYQLEDGRVAIPSVLS 418 Query: 415 PYMNNLAVI 423 PYM+++ I Sbjct: 419 PYMSDITHI 427 >gi|254457173|ref|ZP_05070601.1| seryl-tRNA synthetase [Campylobacterales bacterium GD 1] gi|207085965|gb|EDZ63249.1| seryl-tRNA synthetase [Campylobacterales bacterium GD 1] Length = 416 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 175/420 (41%), Positives = 254/420 (60%), Gaps = 7/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ ++++ + + L ++ + E + + +E+ + E ++A +NS S + G Sbjct: 1 MIDLKLLQKDFDTVSAKLIRKGVGAALIEKLKTKNEELKKAKSSFETLQALQNSMSKEFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 EG + LK K + + + L+ + IPN+P + VP G Sbjct: 61 IYKREGK--DISELKQRVDANKIVINEALEIQRTCQEELENIAMSIPNMPDDNVPDGEDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+NI I+ V +EH+E+ E G +DF+R KL+ +RFSV G A LERAL Sbjct: 119 NDNIEIKKVLTPKEFSFTPKEHWELAEENGWIDFERGVKLATSRFSVSFGMGAKLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM++ + S+ G+ EVS P LV A+ GTGQ+PKF DD++ +LIPT+EV +TN Sbjct: 179 NFMLNFN-SKRGFEEVSVPALVNRTALEGTGQLPKFEDDLYKIDGQELFLIPTAEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY EI+ + LP + T FR EAG+AGRDTRGM+RQHQF K ELV++++ ++S Sbjct: 238 LYQDEILSADELPKKMTAYTSCFRKEAGAAGRDTRGMIRQHQFHKVELVALSKPDESEVI 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M+ CA +IL L+L +R+V+LCTGDLGFSA T D+EVWL GQN YREISS S + Sbjct: 298 FDEMVECASDILTALELPHRIVNLCTGDLGFSAAHTTDIEVWLPGQNQYREISSISNTRD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R++D HTLNGS +AVGR L+AI+ENY N DGS+ IP VL+PY+ Sbjct: 358 FQARRAKIRFKD--GNKNSIVHTLNGSSLAVGRTLVAIMENYQNEDGSIDIPEVLKPYLG 415 >gi|46400763|emb|CAF24212.1| probable seryl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] Length = 453 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 169/429 (39%), Positives = 249/429 (58%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DI+ IR++ ++ LK + + I LD R K+E ++A+RN S +IG+ Sbjct: 28 MIDIRLIRKDRFAVEKQLKTKDPQIDLTNICHLDHSIREAKTKVETLKAKRNEISQKIGE 87 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +L NE + ++ L+ + E +S +PN+P+E++ I Sbjct: 88 MKRANQDTF--SLMNEVAGFGTEIHFLDNQIKEWEEQFNYELSSLPNLPMEDIKISQDPK 145 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN++I+ G+KP + H E+ E L L DF R K+SG + V A LE AL Q Sbjct: 146 ENVVIKEFGQKPIFSFPFKNHVELNEKLNLFDFKRGAKISGTGWPVYRAMGARLEWALIQ 205 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSLT 237 +MI++H ++G+T+ PLLVR ++G+GQ+PKF F D +LIPT+EV L Sbjct: 206 YMIEIHV-KNGFTQWIPPLLVRKNTVFGSGQLPKFESQQFKIQDEDYHLYLIPTAEVPLN 264 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 L+ EII + L L++ P FR EAG+AG RG++R HQF K E+ T+ E+S Sbjct: 265 GLHMDEIIPQEELSLKYVAYTPCFRREAGAAGSQERGLIRMHQFNKVEMFCFTKPEESAQ 324 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +M+ AEEIL+ L+LHYR L TGD+ F+A +T D+EVWL GQN Y E+SS S C Sbjct: 325 VFNQMMDSAEEILQGLELHYRNALLVTGDMSFAAARTIDIEVWLPGQNRYYEVSSVSNCT 384 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++QSRR N+R+R + K L F HTLNGSG+A R ++A+LEN DGSV IP VL+ Y+ Sbjct: 385 DYQSRRSNTRFRREDGK-LDFVHTLNGSGLATSRLMVALLENNQREDGSVCIPNVLQRYL 443 Query: 418 NNLAVIKKE 426 N + + Sbjct: 444 NGQSTLNPT 452 >gi|225575633|ref|ZP_03784243.1| hypothetical protein RUMHYD_03726 [Blautia hydrogenotrophica DSM 10507] gi|225037143|gb|EEG47389.1| hypothetical protein RUMHYD_03726 [Blautia hydrogenotrophica DSM 10507] Length = 428 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 140/431 (32%), Positives = 226/431 (52%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + +K + + P + +L LD++NR + +++E +RA+RN S Q Sbjct: 1 MLDIKFVRENPELVKQNIKNKFQDSKLPLVDEVLELDKQNREIKQEVEALRAQRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + + ++ L +E EV L + + IPN+ VPIG Sbjct: 61 IGALMGQGKKEEAEEVKKQVAESGNRIEELSTKEKEVEEKLLRNMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI E+ +D D A +++G F L G +A L A Sbjct: 121 DDSENVEVEKFGEPIVPEFEIPYHTEIMESFQGIDLDSARRVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + II +LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTIIPENTLPQTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESP 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R K HTLN + VA R LIA LEN LNADGSV+IP L+PY Sbjct: 360 GDAQARRLKIRVNGEKGK--YLAHTLNNTVVAPPRMLIAFLENNLNADGSVSIPVALQPY 417 Query: 417 MNNLAVIKKEH 427 M + I+K++ Sbjct: 418 MGGMKKIEKKN 428 >gi|119486228|ref|ZP_01620288.1| seryl-tRNA synthetase [Lyngbya sp. PCC 8106] gi|119456719|gb|EAW37848.1| seryl-tRNA synthetase [Lyngbya sp. PCC 8106] Length = 429 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 201/426 (47%), Positives = 265/426 (62%), Gaps = 11/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+NP+ + LK R + + IL LDE+ R L K+ + R N Q+G+ Sbjct: 1 MLDIKQIRENPQAIQDRLKLRG-DYDLQPILDLDERRRELEKERIQLETRSNEIGKQVGE 59 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + + ALK E L+E L LE +E +V + ++ L+ IPN+P E P G Sbjct: 60 KIKSGSDPKGAEIQALKEEGQKLRESLSELEPKEKKVIAEIEALLLPIPNLPSESTPFGK 119 Query: 118 SANENILIRSVGKKP-SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 S EN+ +R G + H+EIGE LG+++F+R K++ +RF L G A LER Sbjct: 120 SEEENVEVRRWGDEYLPENPKILPHWEIGENLGILNFERGVKIAQSRFVSLIGAGAALER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVS 235 AL QFM+D HT +GY EV PLLV ++ GTGQ+PKFA++ F C+ D WLIPTSEV Sbjct: 180 ALVQFMLDTHT-SNGYVEVMPPLLVNSTSLQGTGQLPKFAEESFKCSEDDLWLIPTSEVP 238 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 + N Y EI++ + LP+ + P FR EAGS G+DTRG++R HQF K EL+ + R E S Sbjct: 239 VVNFYRDEILDGEQLPIYHCSFTPCFRREAGSYGKDTRGLIRLHQFHKVELIKLVRPETS 298 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EHE+++ AE IL+ L L YRV+ LCTGDLGFSA K YD+EVWL YREISSCS Sbjct: 299 EAEHEKLVQDAEGILQALKLPYRVIELCTGDLGFSAAKCYDIEVWLPSSQSYREISSCSN 358 Query: 356 CGNFQSRRMNSRY----RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 +FQ RR N R+ K +F H LNGSG+A+GR + AILENY DGSV IP Sbjct: 359 VKDFQPRRANIRFKESKSGKKKKKTEFVHALNGSGLAIGRTMAAILENYQQPDGSVRIPE 418 Query: 412 VLRPYM 417 VL+PYM Sbjct: 419 VLQPYM 424 >gi|34540153|ref|NP_904632.1| seryl-tRNA synthetase [Porphyromonas gingivalis W83] gi|34396465|gb|AAQ65531.1| seryl-tRNA synthetase [Porphyromonas gingivalis W83] Length = 423 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 143/421 (33%), Positives = 243/421 (57%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML ++ I +N E + L +H + + ++SLD + R + ++ A +N+ + +I Sbjct: 1 MLTLKQIIENKEEVIRRLAVKHFDAAAILDEVISLDRQRRETQQSLDARLAEQNAIAKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + G +A++ + + +K LE+ + ++ +++++ + IPN+P E VP G + Sbjct: 61 GALMKAGKKDEAEAIRAKVADMKAGSHHLEERKADLENAIRQQLLLIPNLPHESVPAGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A EN+ +++ G P H+++ + L+DF+ K++GA F V G A L+RAL Sbjct: 121 AEENVCVKTGGTVPELGTHKLPHWDLAKKYDLIDFELGVKITGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 F +D G+TE+ P +V +++ YGTGQ+P M+ T D +LIPT+EV +T Sbjct: 181 VNFFLDE-ARNAGFTEIEPPYVVNEDSGYGTGQLPDKEGQMYHVTADNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ I+ LP+ T + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 NIFRDVILSEDELPILLTAYSACFRREAGSYGKDVRGLNRLHQFNKVEIVCIDKPEHSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + ++M+ + ++ +L L +R++ LC GD+ F++ TYD EV+ A Q + E+SS S Sbjct: 300 QLDQMVGYVQGLVDKLGLPWRILRLCGGDISFTSALTYDFEVYSAAQERWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+ R+ RYR+ + K ++ HTLNGS +A+ R + A+LEN ADG + IP L PY Sbjct: 360 SFQANRLKCRYRNAD-KKVELCHTLNGSALALPRIVAALLENNQTADG-IRIPDCLVPYT 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|147921639|ref|YP_684544.1| seryl-tRNA synthetase [uncultured methanogenic archaeon RC-I] gi|121677008|sp|Q0W8S5|SYS_UNCMA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|110619940|emb|CAJ35218.1| seryl-tRNA synthetase [uncultured methanogenic archaeon RC-I] Length = 425 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 155/429 (36%), Positives = 244/429 (56%), Gaps = 10/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ----SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLDI+++R++P+ + L+KR+ + + + +L+ D + R + K++++R RRN S Sbjct: 1 MLDIRFVRESPDVVRADLRKRN-DLEKLAWVDDLLAKDSQARAMQVKVDELRRRRNEISR 59 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I +A G + AL E + Q+ E E E + + + +PN+ + VP+G Sbjct: 60 EINEARKAGKDT--SALMAEARDIPRQIKEAETEMEESRNKVHYYLMRLPNILDDSVPVG 117 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 EN+ ++ G+ + H + G DF+RA K++GA F L G++ L+ Sbjct: 118 KDDTENVEVKRWGEPVQKDFEIKNHGLLAVEHGWADFERAAKVAGAGFYFLKGNMVLLDM 177 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL +F +DL + G+T V+ P ++ ++ G + F M+ D +LI TSE Sbjct: 178 ALQRFAMDL-LVKRGFTPVTPPYMMNRKSYEGVTDLADFEKVMYKIEGDDMYLIATSEHP 236 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 + +Y EI E K LPLR ++P FR E G+ G DT+G+ R HQF K E + EDS Sbjct: 237 IGAMYQGEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVHQFHKIEQFVFCKPEDS 296 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + HE +L+ AE + ++L L Y VV++CTGD+G A K YD+EVW+ +N Y+E+ SCS Sbjct: 297 WKIHEEILANAEAVFQQLGLPYHVVNICTGDIGTVAAKKYDIEVWMPRENTYKEVVSCSN 356 Query: 356 CGNFQSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 C +Q+ R+N + RDP +S ++ HTLN + +A R + AILEN DGSV IP VLR Sbjct: 357 CTAYQATRLNIKVRDPKDFESKRYVHTLNSTAIATSRAMRAILENNQQKDGSVLIPEVLR 416 Query: 415 PYMNNLAVI 423 PYMN L + Sbjct: 417 PYMNGLEYL 425 >gi|242069129|ref|XP_002449841.1| hypothetical protein SORBIDRAFT_05g024270 [Sorghum bicolor] gi|241935684|gb|EES08829.1| hypothetical protein SORBIDRAFT_05g024270 [Sorghum bicolor] Length = 514 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 143/442 (32%), Positives = 232/442 (52%), Gaps = 22/442 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N + + ++ R+ + +L L ++ L K++E +RA RN+ + + Sbjct: 76 IDFKWIRDNRDAVADNIRSRNSTANLDLVLELYDQYLALQKEVERLRAERNAVA---NKM 132 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + S+ AL E LKE L LE++ ++ L+ IPN +VP+G + Sbjct: 133 KGKLDPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDVPVGGEESS 192 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 +L + VG + S ++H ++G+ L L DFD A ++SG++F L LE AL + Sbjct: 193 -VLRKEVGSQRSFNFTIKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNW 251 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 I S+ G+T + P +VR + G P+ + + LI T+E+ + + Sbjct: 252 AISE-VSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQVYSIEDSDQCLIGTAEIPVGGI 310 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+ +LPL++ + FR+EAG+AG TRG+ R HQF K E+ R ++S H Sbjct: 311 HMDSILAESALPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPDESDKLH 370 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E +++ E++ L LH++ + + TGDLG A + +D+E W+ G Y EISS S C ++ Sbjct: 371 EELITIEEDLYASLGLHFKTLDMATGDLGAPAYRKFDIEAWMPGLERYGEISSASNCTDY 430 Query: 360 QSRRMNSRYRD---------------PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 QSRR+ RYR S +F HTLN + VAV R ++ ILEN+ D Sbjct: 431 QSRRLGIRYRPSPSEPPSTNTKKGKGAGSGPTQFVHTLNATAVAVPRLIVCILENFQQDD 490 Query: 405 GSVTIPTVLRPYMNNLAVIKKE 426 GS+ +P LRPYM L VI + Sbjct: 491 GSIVVPEPLRPYMGGLEVISPK 512 >gi|91763289|ref|ZP_01265253.1| serine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002] gi|91717702|gb|EAS84353.1| serine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002] Length = 426 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 194/430 (45%), Positives = 267/430 (62%), Gaps = 17/430 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M +I+ IR + E AL KR +E + ILSLDE NR I++ E + + S Sbjct: 8 MHNIKEIRNDVEAFKKALNKRFIEIDVDKILSLDENNRDYIQQRELLEKEKKDISK---- 63 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 S +L ++ + ++ + K + V + L+ ++S IPN+P +VP G N Sbjct: 64 -------SKDQSLFEKSKKITVEIDNISKLQAGVKNELETILSSIPNIPHPDVPTGKDEN 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ I G P+ + H+E+GE L ++DFD ATK +G+RF + LA LERAL Sbjct: 117 SNVEISKSGTIPNFKFKPKSHYELGENLNMLDFDLATKTTGSRFVFVKDKLAMLERALSN 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----DGRWLIPTSEVS 235 FM+D H + +GY E+S PL+ D MYGTGQ+PKF +D F D ++LIPT+EV Sbjct: 177 FMLDTHVNTNGYEEISPPLIATDATMYGTGQLPKFDNDQFELKLDDSSDRKFLIPTAEVI 236 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTN+ +II+ K LP+R P FR EAGS G+DT+GM+RQHQF+K E+VSI + Sbjct: 237 LTNIVKDQIIDKKKLPMRMVASTPCFRKEAGSYGKDTKGMIRQHQFYKVEMVSIVEIDKC 296 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 E +RM CA +IL L L YR + LCTGD+GFSA KT+D+EVWL ++ YREISSCS+ Sbjct: 297 LPELDRMTDCATKILDLLKLPYRKIVLCTGDMGFSAEKTFDIEVWLPSEDKYREISSCSS 356 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 CG+FQ+RRM +RY++ K TLNGSG+AVGR L+AILENY DGS+ +P L+P Sbjct: 357 CGSFQARRMKARYKNEK-KETVLVGTLNGSGLAVGRTLVAILENYQQEDGSILVPEALKP 415 Query: 416 YMNNLAVIKK 425 YMNN+ I K Sbjct: 416 YMNNIEKIVK 425 >gi|332828951|gb|EGK01634.1| seryl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286] Length = 423 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 155/426 (36%), Positives = 240/426 (56%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML ++ I +NPE + L K+H + + E +L +D+ + ++ A N+ S I Sbjct: 1 MLTLKTISENPELVIKKLAKKHFDGKEIIEKVLDIDQTRKKTQTTLDASLAESNNLSKHI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 GQ + EG + +A KN S LK + ILE + L+ L+ IPN+P +EVP G + Sbjct: 61 GQLMKEGKKTEAEAAKNRVSELKGENKILEDALRQAEQDLQDLLVLIPNLPADEVPEGRT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N++ R+ G P + H+++ + L+DF+ K+SGA F V G A L+RAL Sbjct: 121 PEDNVVERTGGVIPDLGEDALPHWDLAKKYDLIDFELGVKISGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 + +D E GY EV P +V + YGTGQ+P M+ T D +LIPT+EV +T Sbjct: 181 INYFLD-KAREAGYLEVQPPYVVNAASGYGTGQLPDKEGQMYHATVDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y I+E K P+ T + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 NIYRDVILEEKDFPVMNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSYQ 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M++ + +++ L L +R++ LC GD+ F++ T+D EV+ A Q + E+SS S Sbjct: 300 SLKEMVAHVQSLVEELGLPWRILRLCGGDMSFTSALTFDFEVFSAAQQRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+ R+ RYRD + K ++ HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 SYQANRLKCRYRDAD-KKIQLVHTLNGSALALPRIVAALLENNQTPEG-IRIPDALVPYT 417 Query: 418 NNLAVI 423 I Sbjct: 418 -GFEFI 422 >gi|302544049|ref|ZP_07296391.1| serine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653] gi|302461667|gb|EFL24760.1| serine-tRNA ligase [Streptomyces himastatinicus ATCC 53653] Length = 425 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 145/429 (33%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +L+ DE+ R + +++R+ + S + Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVGIVDALLAADERRRSSSVRFDELRSEQKSLGKLVP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + L + + E+ + L+ + N+ +VP+G Sbjct: 61 KASGDEKAE----LLKKAGELSAAVKAADAEQDAAAEETQNLLRQLGNLVHPDVPVGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L + + ++H E+GE LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFTVLETVGTPRDFAAEGIAPKDHLELGELLGAIDTERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L + + G+T V P LV+ +AM GTG + + A+D++ D +L+ TSEV L Sbjct: 177 LVNAAMAQ-ATAAGFTPVLTPALVKPKAMEGTGFLGQAAEDVYHLDKDDLYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EI+ES+ LP R+ + FR EAGS G+DTRG+ R HQF K E+ T E++ Sbjct: 236 AAYHMDEILESEQLPRRYAGFSSCFRREAGSYGKDTRGIFRVHQFDKVEMFVYTTPEEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L +RVV L +GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 AEHQRLLEWEKQWLTSLELPFRVVDLASGDLGSSATRKFDCEAWIPTQGKYRELTSTSNT 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQSRR++ R R K ++ TLNG+ AV R ++AILEN+ ADGSV +P VLRP+ Sbjct: 356 TEFQSRRLSIRMR--EGKKVRPLATLNGTLCAVTRTIVAILENHQQADGSVRVPEVLRPF 413 Query: 417 MNNLAVIKK 425 + V+ Sbjct: 414 LGGREVLAP 422 >gi|110598390|ref|ZP_01386663.1| seryl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] gi|110339999|gb|EAT58501.1| seryl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] Length = 429 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 162/430 (37%), Positives = 251/430 (58%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +IR N + L +R L + + +L LD++ + L+++ +D +A RN S + Sbjct: 1 MLDINYIRLNQVEVMNMLHQRQLAVEVPRLQELLDLDKERKELVQRSDDQKALRNKVSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + G S + L ++ E++ +++ ++ ++ ++ +PN VP G Sbjct: 61 VADIKKSGQGS-AEELIVRMKSVSEEIALMDNRLSQLEEEMESILLALPNKLHSSVPAGK 119 Query: 118 SANEN-ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 SA EN + V + + H E+G++LG++DF+R K+SGA F G A LER Sbjct: 120 SAAENEVFGEPVTFVHNLDFPVKNHLELGKSLGILDFERGAKVSGAGFPAYMGKGARLER 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL FM+D+HT HGYTEV P V E++ GTGQ PKFAD ++ D + IPT+EV Sbjct: 180 ALINFMLDMHTENHGYTEVFPPFFVNRESLRGTGQWPKFADQVYHMQEDDLYAIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNL+ E++++ +LP+ + + FR EAGS G+DTRG LR HQF K E+V TR E+S Sbjct: 240 VTNLHRGEMLDNGALPISYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEES 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E++ AE IL L + YRV+ LC+GD+ +A K YD+EVW + Y E SSCS Sbjct: 300 YEALEQIRRNAEAILIALKIPYRVLLLCSGDISANAAKCYDIEVWSPAEQKYLEASSCSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RR N R++ +F HTLNGSG+A R ++++LE+Y A+G++ +P VLR Sbjct: 360 FEDYQARRANIRFKPNGKSKPEFVHTLNGSGLATSRLMVSLLEHYQTAEGNIRVPEVLRH 419 Query: 416 YMNNLAVIKK 425 Y + Sbjct: 420 YTRFDEITAP 429 >gi|223983497|ref|ZP_03633683.1| hypothetical protein HOLDEFILI_00964 [Holdemania filiformis DSM 12042] gi|223964669|gb|EEF68995.1| hypothetical protein HOLDEFILI_00964 [Holdemania filiformis DSM 12042] Length = 427 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 143/430 (33%), Positives = 224/430 (52%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +R NPE + +KK+ + ++ LD + R + +R +RN+ S Q Sbjct: 1 MLDINLLRTNPEVVKENIKKKFQNQKLELVDKVVELDRQFRKAKTDGDSLRGQRNAISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + K E + + +QL LE +E E+ + +KK++ +PN+ E VPIG Sbjct: 61 IGGFMKQGLKDKAEEAKKEVANIAKQLADLEVKEEELAAEIKKIMLVLPNIIDETVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ + H +I E+ +D D A K SG F L G +A L A Sbjct: 121 DDSENVEIEKFGEPVVPDYEIPYHTDIMESFDGIDLDSARKTSGNGFYYLKGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + + G + + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYYIPPFMIRSDVVTGVMSFAEMENMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + II+ + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTIIDEEQLPQTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 HWYDQLWKNSVDFFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K F HTLN + VA R LIA LEN LNADG+V IP LR Y Sbjct: 360 GDAQARRLGIRIQGKEGK--YFAHTLNNTVVAPPRMLIAFLENNLNADGTVNIPEPLRMY 417 Query: 417 MNNLAVIKKE 426 M I+K+ Sbjct: 418 MGGKTKIEKK 427 >gi|212224239|ref|YP_002307475.1| seryl-tRNA synthetase [Thermococcus onnurineus NA1] gi|229470724|sp|B6YWW5|SYS_THEON RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|212009196|gb|ACJ16578.1| Seryl-tRNA synthetase [Thermococcus onnurineus NA1] Length = 457 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 166/448 (37%), Positives = 249/448 (55%), Gaps = 27/448 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ IR+NP+ + L KR + + IL LD+K R ++KI +R RN + Q Sbjct: 1 MLDIKLIRENPDLVKGDLIKRGEIEKIKWIDEILELDKKWRENLRKINQLRKERNQLAVQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ G +D L +++ + +Q+ LEKE E+ + + + +PN+ E VPIG Sbjct: 61 IGKRKKAGEP--IDDLLAKSNEIVKQIETLEKEVEELRAKIDYYLWRLPNITHESVPIGK 118 Query: 118 SANENILIRSVGKKPSA--------------------IHLSREHFEIGEALGLMDFDRAT 157 +EN+ IR GK R H ++ E L D +RA Sbjct: 119 DDSENVPIRFWGKAKVWEGFLETFKEQSLGKMDYEVIDWRPRLHVDMLEILRGADIERAA 178 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K+SG+RF L L L+ AL +F +D E G+ V P +VR G F D Sbjct: 179 KVSGSRFYYLLNELVILDLALIRFALD-KLIEKGFIPVIPPYMVRRYVEEGVTSFGDFED 237 Query: 218 DMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LIPT+E L ++++EI+E K LPL + ++P FR EAG+AG+DT+G+ Sbjct: 238 VIYKVEGEDLYLIPTAEHPLAGMHANEILEGKDLPLLYVGISPCFRKEAGTAGKDTKGIF 297 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E +R E+S+ HE+++ AEEI + L++ YRVV++CTGDLG+ A K YD Sbjct: 298 RVHQFHKVEQFVYSRPEESWEWHEKLIQNAEEIFQELEIPYRVVNICTGDLGYVAAKKYD 357 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E W+AGQ +RE+ S S C +Q+RR+N RYRD + KF HTLN + +A R ++AI Sbjct: 358 IEAWMAGQGKFREVVSASNCTEWQARRLNIRYRDKTHEKPKFVHTLNSTAIATSRAIVAI 417 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIK 424 LEN+ +G V +P VL Y ++ Sbjct: 418 LENHQTEEGVVKLPKVLWKYTGFKEILP 445 >gi|166032905|ref|ZP_02235734.1| hypothetical protein DORFOR_02626 [Dorea formicigenerans ATCC 27755] gi|166027262|gb|EDR46019.1| hypothetical protein DORFOR_02626 [Dorea formicigenerans ATCC 27755] Length = 428 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 141/430 (32%), Positives = 230/430 (53%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NPE + +K + + P + ++ LD++NR + +++E +RA +N S Q Sbjct: 1 MLDIKFVRNNPEVVKQNIKNKFQDDKLPLVDEVIELDQRNREIKQEVEALRADKNQISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + E++ L KEE EV + +K+ + IPN+ VPIG Sbjct: 61 IGACMAQGKKEEAEELKKKVQENAERVEALSKEEKEVEAKIKQNMMIIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ + H +I E+ +D + A K++G F L G +A L A Sbjct: 121 DDSENVEIEKFGEPVVPDYEIPYHTDIMESFNGIDLESAGKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCIPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + ++ LP T+ +P FR E G+ G + RG+ R HQF K E++ + + E+S Sbjct: 240 IGKFIDTMLTEDQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ ++ + +D+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDLFRSMDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R +D + F +TLN + VA R LIA LEN L ADGSV IP VLRPY Sbjct: 360 GDAQARRLGIRVKDADGNKY-FANTLNNTVVAPPRMLIAFLENNLQADGSVRIPEVLRPY 418 Query: 417 MNNLAVIKKE 426 M + IK++ Sbjct: 419 MGGMTEIKRK 428 >gi|269302656|gb|ACZ32756.1| seryl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN] Length = 427 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 172/430 (40%), Positives = 244/430 (56%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ PE + L+K+ + E +LSLD++ R L E ++A+R S I + Sbjct: 1 MLDIKIIRKTPEECETRLRKKDPKISLEPVLSLDKEVRQLKTDSETLQAQRRLLSQDIHK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +G L E TL L +E+ + + L +L+S +PN P +++P+ Sbjct: 61 AKTQG--VDATNLIQEVETLAADLEKIEQHLDQKNAQLHELLSHLPNYPADDIPVSEDKA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+SVG P+ + H E+ + L ++DF A K +G+ + LE AL Sbjct: 119 GNQVIKSVGDLPTFSFPPKHHLELNQELDILDFQAAAKTTGSGWPAYKNRGVLLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVSLT 237 +M+ HG+ PLLV+ E ++G+GQIPKF + DG +LIPT+EV L Sbjct: 179 YMLQKQA-AHGFQLWLPPLLVKKEILFGSGQIPKFDGQYYRVEDGEQYLYLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 S +I+ K LPL + P FR EAG+AG RG++R HQF K E+ + T Sbjct: 238 GFRSQDILTEKELPLYYAACTPCFRREAGAAGAQERGLVRVHQFHKVEMFAFTTPNQDDI 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +E+MLS EE+L L L YR+ L TGD+ F+A KT D EVWL GQ + E+SS S C Sbjct: 298 AYEKMLSIVEEMLTELKLPYRLSLLSTGDMSFTASKTIDAEVWLPGQKAFYEVSSISQCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQSRR +RY+D K L+F HTLNGSG+A R L+AILEN ADGSV IP VLRPY+ Sbjct: 358 DFQSRRSGTRYKDSQGK-LQFVHTLNGSGLATPRLLVAILENNQQADGSVVIPEVLRPYL 416 Query: 418 NNLAVIKKEH 427 L ++ + Sbjct: 417 GGLEILLPKD 426 >gi|261872052|gb|ACY02860.1| seryl-tRNA synthetase 1 [Streptomyces sp. ATCC 700974] Length = 424 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 148/429 (34%), Positives = 237/429 (55%), Gaps = 12/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + + R + + +LS+DE R + + +RA + S I Sbjct: 1 MIDLRLLRENPDRVRASQRSRGEDVDLVDALLSVDELRRSSGVRFDGLRAEQRSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A L + LK + ++ + + L+ + N+ E+VP+G Sbjct: 61 KA----TPEERAELLKKAEQLKADVKADAAQDEAAADAKR-LLLQLGNIVHEDVPVGGEE 115 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + ++H E+GEALG +D +R K+SG+RF LTG A LE A Sbjct: 116 DFVVLETHGTIRDFGAEGFEPKDHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLELA 175 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+T + P LVR AM GTG + + A++++ D +L+ TSEV L Sbjct: 176 LVNAAIAQAT-EAGFTPMLTPALVRPRAMEGTGFLGQAAENVYHLEKDDYYLVGTSEVPL 234 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII++ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S D+ Sbjct: 235 AAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAE 294 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L ++ L L+L ++V+ + T DLG SA + +D E W+ Q YRE++S S C Sbjct: 295 AEHRRLLEWEKQWLTGLELPFQVIDVATADLGASASRKFDCEAWIPTQGKYRELTSASNC 354 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R RD K ++ TLNG+ AV R ++A+LEN+ DGSV +P VLRPY Sbjct: 355 DGFQARRLSVRMRD--GKKVQPLATLNGTLCAVPRTIVALLENHQLPDGSVRVPEVLRPY 412 Query: 417 MNNLAVIKK 425 + +++ Sbjct: 413 LGGREILEP 421 >gi|226363330|ref|YP_002781112.1| seryl-tRNA synthetase [Rhodococcus opacus B4] gi|254783043|sp|C1B914|SYS_RHOOB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226241819|dbj|BAH52167.1| seryl-tRNA synthetase [Rhodococcus opacus B4] Length = 418 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 146/427 (34%), Positives = 242/427 (56%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NP+ + + + R +P + +L D R + +++RA + + ++G Sbjct: 1 MIDLKFLRENPDAVRESQRTRGEDPALVDALLEADASRRAAVLAGDNLRAEQKAFGKKVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L + L ++ E +HE ++L I N+ + P Sbjct: 61 QASPEERPA----LLEGSKELAAKVKQAEAGQHEAQAALDAAHRAISNIVQDGAP-AGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ I + +VG+ P+ ++H E+GE+LGL+D +R K+SGARF LTG A L+ + Sbjct: 116 DDFITLETVGEIPAFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGML 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q +G+ + P+LVR E M GTG + +D+++ D +L+ TSEV L Sbjct: 176 QLAAQ-KAMANGFQMMIPPVLVRPEIMAGTGFLGAHSDEIYHLADDDLYLVGTSEVPLAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ P R+ + FR EAGS G+DTRG++R HQF K E+ + + ED+ E Sbjct: 235 YHSGEILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L+ ++L +D+ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 295 HQRLLAWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQQAYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD N K + TLNG+ +A R ++AILEN+ +DG+V +P L P++ Sbjct: 355 FQARRLGVRYRDENGK-PQTAATLNGT-LATTRWIVAILENHQQSDGTVRVPEALVPFV- 411 Query: 419 NLAVIKK 425 V+K Sbjct: 412 GTDVLKP 418 >gi|86130922|ref|ZP_01049521.1| Seryl-tRNA synthetase [Dokdonia donghaensis MED134] gi|85818333|gb|EAQ39493.1| Seryl-tRNA synthetase [Dokdonia donghaensis MED134] Length = 423 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 153/421 (36%), Positives = 235/421 (55%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML++ IR+N E AL KR+++ + +++ DE R +++++ A N S +I Sbjct: 1 MLEVAHIRENKEAFAKALSKRNIDAATLLDQVIAADELRRNSQSQLDEVLADSNKFSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + LK +T+ LKEQ L+++ + L+ L+ +PNVP + VP G S Sbjct: 61 GMLFKSGEAQKANLLKEKTAGLKEQSKTLQEQLNAATEELQNLLYQLPNVPHDSVPEGNS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N I G P + H+E+ + ++DF+ TK++GA F V G A L+RAL Sbjct: 121 DEDNEEIFREGDIPVLHDAALPHWELAKKYDIIDFELGTKITGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 + +D +T GYTE P LV + + +GTGQ+P M+ T D +LIPT+EV +T Sbjct: 181 IAYFLDKNT-AAGYTEYQVPHLVNEASGFGTGQLPDKEGQMYHVTEDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++ LP+ T P FR EAGS G RG+ R HQF K E+V I ++S Sbjct: 240 NMFRGDLRSHSELPITCTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDNSAA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + IL+ L+L YR++ LC GDLGF++ TYD E++ Q+ + EISS S Sbjct: 300 ALDGMVDHVKTILQELELPYRILRLCGGDLGFTSHLTYDFELFSTAQDRWLEISSVSNFL 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R++D + ++ K HTLNGS +A+ R L ILEN +G + IP L PY Sbjct: 360 TFQANRLKLRFKDQDGQN-KLAHTLNGSALALPRVLAGILENCQTPEG-IKIPKALVPYC 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|34581191|ref|ZP_00142671.1| seryl-tRNA synthetase [Rickettsia sibirica 246] gi|28262576|gb|EAA26080.1| seryl-tRNA synthetase [Rickettsia sibirica 246] Length = 425 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 207/423 (48%), Positives = 282/423 (66%), Gaps = 3/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L +R +EP S I LD + R + I++++ R S +G Sbjct: 1 MLNIKWIRENKELFDEKLSQRFIEPMSSKIAMLDGEKRKITSLIQELQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A + + L+ + + E+L LE++ + + L +PN+P EEVP G + Sbjct: 61 -MASKSGEEFEGLQRDVKHINEKLEALEQDLNNNNELNELLNM-LPNIPDEEVPYGMDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+R+ G + + L+++HFE+G L LMDF++ K+SG RF L G LA LERAL Sbjct: 119 MNKLVRTYG-ETNPNALNKQHFELGIKLNLMDFEQTAKISGTRFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT E + E+S P+LVRD AMY GQ+PKFA++ F TT+G LIPT+EVSL N+ Sbjct: 178 FMIDVHTKEWDFFEISPPVLVRDNAMYNAGQLPKFAEESFATTNGYRLIPTAEVSLINMV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R+ P FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 238 ADTIIPREKLPIRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESTNEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E IL++L+L YRV+ LCTGD+GF+A KTYD+EVWL GQ YREI+SCS CG+FQ Sbjct: 298 YITNASETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNEDGSITIPDVLINYMGGL 417 Query: 421 AVI 423 I Sbjct: 418 QKI 420 >gi|307719618|ref|YP_003875150.1| seryl-tRNA synthetase [Spirochaeta thermophila DSM 6192] gi|306533343|gb|ADN02877.1| seryl-tRNA synthetase [Spirochaeta thermophila DSM 6192] Length = 425 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 155/428 (36%), Positives = 245/428 (57%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++++++ E + ++ R +E E +++L ++ L +++++RARRN ++ Sbjct: 1 MLDLRFVKEHVELVKENVRNRFMEVDVEGVVALYDRRNDLKARVDELRARRNEHAR---- 56 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + A E LKE++ LE+E V L++ IPN+ E P+G Sbjct: 57 LMKSASPDERPARVEEGRRLKEEIARLEEELAAVEEELRREALRIPNLSHPEAPVGKEEK 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR GK PS R+H E+G L ++DFDRA K+SGA+F L A LE AL + Sbjct: 117 DNLEIRRWGKVPSFDFEPRDHLELGRLLDIVDFDRAAKVSGAKFYYLKNEGALLELALVR 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 + +D+ E G+ + P L R+ + G G P+ A+ T L+ T+E++L Sbjct: 177 YALDV-LREKGFDLFTTPDLARESIVEGIGFQPRGAESNIYTVEETDLCLVGTAEITLGG 235 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y+ EII ++LPLRF ++ FR EAG+AG+ ++G+ R HQF K E+ R E+S Sbjct: 236 MYADEIIPGETLPLRFAGVSHCFRKEAGAAGQYSKGLYRVHQFTKVEMFVYCRPEESEGI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H +L+ EEI L + YRVV CTGDLG A + +DLE W+ G+ + EI+S S C + Sbjct: 296 HRELLAIEEEIHAGLGIPYRVVDTCTGDLGAPAYRKFDLEAWMPGREGWGEITSTSNCTD 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR+ R+++ +F H LNG+ +AV R +IAILEN+ DGSV IP L PY Sbjct: 356 YQARRLGVRFKEAEGGKPRFVHMLNGTALAVPRVIIAILENFQERDGSVRIPEALVPYT- 414 Query: 419 NLAVIKKE 426 VI+ + Sbjct: 415 GFNVIRPK 422 >gi|294056084|ref|YP_003549742.1| seryl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] gi|293615417|gb|ADE55572.1| seryl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] Length = 423 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 159/418 (38%), Positives = 229/418 (54%), Gaps = 5/418 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DI+ +R+ P+ + A+ + + +L LD R I + E RA++ + + ++ Sbjct: 1 MIDIKLLREQPDRVRAAIANKKFNCDIDAVLELDATRRAKITEAETARAQQKAANKEMAA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G+ ++ +K E + Q LE E + + IPN+P VPIG + Sbjct: 61 L-AKGSPEFLEKVK-EMKAIAAQAKELEAEAKAADEAFQAPFLEIPNLPDPSVPIGKGED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN++ + G + + HF+I +DF R K +GA F G ++ L RAL Sbjct: 119 ENVVASTWGDADADFPNAVAHFDIPWFESRIDFARGVKATGAGFPFYVGEMSRLVRALVN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 F + E+GY EV P++V E+ TGQ+P M+ +G +LIPT+EV +TN Sbjct: 179 FFLQE-AQENGYEEVLPPIVVNAESATATGQLPDKEGQMYVDENEGLYLIPTAEVPVTNF 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y EI+E+ LP+ P FR EAGS G RG+ R HQF K ELV T E S E Sbjct: 238 YRDEILEADQLPIYRCAYTPCFRREAGSWGAHVRGLNRLHQFDKVELVKWTDAETSMDEL 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++ E L++L L YRV+ +CTGD+GF K YDLEV+ AGQ + E+SSCS +F Sbjct: 298 EKLRENVEGTLQKLGLPYRVLRMCTGDIGFPHAKQYDLEVFAAGQKRWLEVSSCSNFTDF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 Q+RR RYR + K + HTLNGSG+AV R L AILEN L ADG V +P L+ +M Sbjct: 358 QARRAGIRYRGEDGKPVT-AHTLNGSGLAVPRVLAAILENNLQADGRVKVPECLQYWM 414 >gi|328958438|ref|YP_004375824.1| serine--tRNA ligase [Carnobacterium sp. 17-4] gi|328674762|gb|AEB30808.1| serine--tRNA ligase [Carnobacterium sp. 17-4] Length = 423 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 200/425 (47%), Positives = 274/425 (64%), Gaps = 5/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI IR N +H + R +E + I++LDE R +K++E +R +N ++ Sbjct: 1 MLDISRIRTNEDHYHQRMIDRGIEKRVIKEIINLDEDRRTKLKEVEYLRNEKNMAYKKVQ 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q G D + +T +++ L+++ + L ++ +PN+ VPIG Sbjct: 61 QLKKNG--VYTDEVDYDTKEKNKEIKKLQEQLTSIEEELNDILFTLPNIADGSVPIGNDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN IR G+K H+E+GE LG++DF R +K++G RF G A LERA+ Sbjct: 119 QENEEIRVNGEKKKFEFEVLPHYELGENLGILDFVRGSKVAGKRFVYYKGLGARLERAVY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+DLHT +HGYTEV P LV++ AM+GTGQ PKF +D+F + LIPT+EV LTN Sbjct: 179 NFMLDLHTRKHGYTEVIPPYLVKESAMFGTGQFPKFKEDVFSIENENLVLIPTAEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EIIE + LP+ FT L+PSFRSEAGSAGRDTRG++R HQF K E+V T +E SF E Sbjct: 239 YYANEIIEYEKLPIYFTALSPSFRSEAGSAGRDTRGLIRMHQFHKVEMVKFTDKESSFDE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M AEE+L+ L++ Y+ + L TGD+GFSA KTYD+EVW Q+ YREISSCS C + Sbjct: 299 LEKMTHDAEEVLQLLEIPYKTIVLSTGDMGFSATKTYDIEVWFPSQDTYREISSCSNCLD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RYRD K ++F HTLNGSG+AVGR + AILENY DGS+ +PT+L PYM+ Sbjct: 359 FQARRAKIRYRDSKGK-IEFVHTLNGSGLAVGRTVAAILENYQQLDGSILVPTILIPYMD 417 Query: 419 NLAVI 423 + VI Sbjct: 418 GIEVI 422 >gi|325954605|ref|YP_004238265.1| seryl-tRNA synthetase [Weeksella virosa DSM 16922] gi|323437223|gb|ADX67687.1| seryl-tRNA synthetase [Weeksella virosa DSM 16922] Length = 422 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 156/425 (36%), Positives = 232/425 (54%), Gaps = 7/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + +I++N E + LKKR+ + + +LSLDE R +++ I A N S +I Sbjct: 1 MLVVSYIQENKEEVIEGLKKRNFKELYLIDEVLSLDELRRKTQFELDTILAESNKLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + LK +T+ LK L+ E +S++ ++ IPNVP E + Sbjct: 61 GNLFKSGQTEDANKLKEQTTELKSSSKELQDLLSEYEASIQNILYQIPNVPNE-LVKAGK 119 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + I S H+E+ + L+DF+ K++GA F V G A L+RAL Sbjct: 120 DENDNEIVFSSGDASPKKGYLPHWEVAKKYDLIDFELGVKITGAGFPVYKGKGARLQRAL 179 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 Q+ +D +T Y E+ P +V + + YGTGQ+P M+ D +LIPTSEV +T Sbjct: 180 IQYFLDKNT-AADYQEIIPPFVVNEASGYGTGQLPDKEGQMYYVKEDDLYLIPTSEVPVT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y I+ + LPL+ T +P FR EAGS G+D RG+ R HQF K E+V I + E+S Sbjct: 239 NIYRDVILRDEELPLKHTAYSPCFRREAGSYGKDVRGLNRLHQFEKVEIVRIEKPENSMA 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + +L+ LDL YR++ LC GD GF++ TYD EV+ Q + E+SS S Sbjct: 299 ALDEMVEHVKGLLEELDLPYRILRLCAGDTGFASSITYDFEVFSQAQEKWLEVSSVSNFR 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+ R+ RY+ + + HTLNGS +A+ R L +ILENY DGS+ IP VL PY Sbjct: 359 DFQANRLKLRYKA--GNASQLLHTLNGSALALPRILASILENYQQEDGSIRIPKVLVPYT 416 Query: 418 NNLAV 422 + Sbjct: 417 GFSEI 421 >gi|73667073|ref|YP_303089.1| seryl-tRNA synthetase [Ehrlichia canis str. Jake] gi|123745850|sp|Q3YS14|SYS_EHRCJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|72394214|gb|AAZ68491.1| seryl-tRNA synthetase [Ehrlichia canis str. Jake] Length = 423 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 213/426 (50%), Positives = 285/426 (66%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D+ +I++NPE D A++ R+ E ++ I+ LD K + L+ ++ ++ RN + +I + Sbjct: 1 MHDVDFIKRNPELFDYAMQNRNYEKVAQKIIELDIKKKQLLTQLYSLQKERNQITREIEK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + + E++ + + S L L++ +PNVP + VP+G + Sbjct: 61 LKKDGVKCDTQ--IESSKNITEKINDIN-NMIKEDSQLIDLLNVLPNVPDDIVPVGKDES 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR G K + + H+E+GE L LMDF +A KLSG+RF +L LA L+RAL Sbjct: 118 SNVEIRKHGYKRNFDFQVKTHYELGEKLNLMDFKQAAKLSGSRFVILKNQLAQLDRALAN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GY+E+S P+LV + AMYG GQ+PKFADD F TT+ L+PTSEV+LTNL Sbjct: 178 FMLDIHTKEFGYSEISHPILVHESAMYGVGQLPKFADDSFKTTENFRLVPTSEVALTNLV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S I S LP+R T +P FR EAGSAG+DTRGM+RQHQF K ELVSI EE S +E E Sbjct: 238 SGMNINSCDLPIRLTACSPCFRLEAGSAGKDTRGMMRQHQFNKVELVSIVTEEQSASELE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM+ AEE+LKRL+L YRV+ LCTGD+GFSA TYD+EVW+ QN YREISSCS C +FQ Sbjct: 298 RMVQVAEEVLKRLELPYRVMMLCTGDMGFSASITYDIEVWVPSQNRYREISSCSNCKDFQ 357 Query: 361 SRRMNSRYR--DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +RRMN++Y N K KF HTLNGS +A+GR +IAILENY N DGS+TIP LR YMN Sbjct: 358 ARRMNTKYTTITNNVKVSKFAHTLNGSALAIGRTIIAILENYQNMDGSITIPLALRKYMN 417 Query: 419 NLAVIK 424 + IK Sbjct: 418 DQEFIK 423 >gi|30682484|ref|NP_849647.1| SRS (SERYL-TRNA SYNTHETASE); serine-tRNA ligase [Arabidopsis thaliana] gi|20268723|gb|AAM14065.1| putative seryl-tRNA synthetase [Arabidopsis thaliana] gi|21689901|gb|AAM67511.1| putative seryl-tRNA synthetase [Arabidopsis thaliana] gi|332190684|gb|AEE28805.1| Seryl-tRNA synthetase [Arabidopsis thaliana] Length = 514 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 142/440 (32%), Positives = 234/440 (53%), Gaps = 19/440 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N E ++I ++ R+ E +L L E L K++E +R RN+ + + Sbjct: 79 IDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEVERLREERNNVAK---KM 135 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S + L E LKE L LE++ ++ L+ + IPN+ +VP+G + Sbjct: 136 KGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHPDVPVGGEDSS 195 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + VG ++H ++G+ L L+DFD A ++SG++F L LE AL + Sbjct: 196 -AIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLLEMALLNW 254 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--GRWLIPTSEVSLTNL 239 + + GYT ++ P +VR + G P+ + + D + LI T+E+ + + Sbjct: 255 TLS-QVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTDQCLIGTAEIPVGGI 313 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+ +LPL++ + FR+EAG+AG T+G+ R HQF K E+ I + EDS + H Sbjct: 314 HMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQPEDSESFH 373 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + ++ E++ L LH++ + + T DLG A + +D+E W+ G + EISS S C ++ Sbjct: 374 QELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMPGLGRFGEISSASNCTDY 433 Query: 360 QSRRMNSRYR--------DPNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 QSRR+ RYR K + KF HTLN + AV R ++ +LENY DGSV Sbjct: 434 QSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVPRMMVCLLENYQQEDGSV 493 Query: 408 TIPTVLRPYMNNLAVIKKEH 427 IP LRP+M + +IK +H Sbjct: 494 VIPEPLRPFMGGIELIKPKH 513 >gi|15618779|ref|NP_225065.1| seryl-tRNA synthetase [Chlamydophila pneumoniae CWL029] gi|15836403|ref|NP_300927.1| seryl-tRNA synthetase [Chlamydophila pneumoniae J138] gi|16752169|ref|NP_445536.1| seryl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|33242230|ref|NP_877171.1| seryl-tRNA synthetase [Chlamydophila pneumoniae TW-183] gi|8928381|sp|Q9Z736|SYS_CHLPN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|4377187|gb|AAD19008.1| Seryl tRNA Synthetase-2 [Chlamydophila pneumoniae CWL029] gi|7189912|gb|AAF38777.1| seryl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|8979244|dbj|BAA99078.1| seryl tRNA synthetase-2 [Chlamydophila pneumoniae J138] gi|33236741|gb|AAP98828.1| seryl-tRNA synthetase [Chlamydophila pneumoniae TW-183] Length = 427 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 172/430 (40%), Positives = 243/430 (56%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ PE + L+K+ + E +LSLD++ R L E ++A+R S I + Sbjct: 1 MLDIKIIRKTPEECETRLRKKDPKISLEPVLSLDKEVRQLKTDSETLQAQRRLLSQDIHK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +G L E TL L +E+ + + L +L+S +PN P +++P+ Sbjct: 61 AKTQG--VDATNLIQEVETLAADLEKIEQHLDQKNAQLHELLSHLPNYPADDIPVSEDKA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+SVG P + H E+ + L ++DF A K +G+ + LE AL Sbjct: 119 GNQVIKSVGDLPIFSFPPKHHLELNQELDILDFQAAAKTTGSGWPAYKNRGVLLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVSLT 237 +M+ HG+ PLLV+ E ++G+GQIPKF + DG +LIPT+EV L Sbjct: 179 YMLQKQA-AHGFQLWLPPLLVKKEILFGSGQIPKFDGQYYRVEDGEQYLYLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 S +I+ K LPL + P FR EAG+AG RG++R HQF K E+ + T Sbjct: 238 GFRSQDILTEKELPLYYAACTPCFRREAGAAGAQERGLVRVHQFHKVEMFAFTTPNQDDI 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +E+MLS EE+L L L YR+ L TGD+ F+A KT D EVWL GQ + E+SS S C Sbjct: 298 AYEKMLSIVEEMLTELKLPYRLSLLSTGDMSFTASKTIDAEVWLPGQKAFYEVSSISQCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQSRR +RY+D K L+F HTLNGSG+A R L+AILEN ADGSV IP VLRPY+ Sbjct: 358 DFQSRRSGTRYKDSQGK-LQFVHTLNGSGLATPRLLVAILENNQQADGSVVIPEVLRPYL 416 Query: 418 NNLAVIKKEH 427 L ++ + Sbjct: 417 GGLEILLPKD 426 >gi|188995510|ref|YP_001929762.1| seryl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] gi|188595190|dbj|BAG34165.1| seryl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] Length = 423 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 143/421 (33%), Positives = 244/421 (57%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML ++ I +N E + L +H + + ++SLD + R + ++ A +N+ + +I Sbjct: 1 MLTLKQIIENKEEVIRRLAVKHFDAAAILDEVISLDRQRRETQQSLDARLAEQNAIAKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + G +A++ + + +K + LE+ + ++ +++++ + IPN+P E VP G + Sbjct: 61 GALMKAGKKGEAEAIRTKVADMKAESHHLEERKADLENAIRQQLLLIPNLPHESVPAGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A EN+ +++ G P H+++ + L+DF+ K++GA F V G A L+RAL Sbjct: 121 AEENVCVKTGGTVPELGTHKLPHWDLAKKYDLIDFELGVKITGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 F +D G+TE+ P +V +++ YGTGQ+P M+ T D +LIPT+EV +T Sbjct: 181 VNFFLDE-ARNAGFTEIEPPYVVNEDSGYGTGQLPDKEGQMYHVTADNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ I+ LP+ T + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 NIFRDVILSEDELPILLTAYSACFRREAGSYGKDVRGLNRLHQFNKVEIVCIDKPEHSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + ++M+ + ++ +L L +R++ LC GD+ F++ TYD EV+ A Q + E+SS S Sbjct: 300 QLDQMVGYVQGLVDKLGLPWRILRLCGGDISFTSALTYDFEVYSAAQERWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+ R+ RYR+ + K ++ HTLNGS +A+ R + A+LEN ADG + IP L PY Sbjct: 360 SFQANRLKCRYRNAD-KKVELCHTLNGSALALPRIVAALLENNQTADG-IRIPDCLVPYT 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|295132331|ref|YP_003583007.1| seryl-tRNA synthetase [Zunongwangia profunda SM-A87] gi|294980346|gb|ADF50811.1| seryl-tRNA synthetase [Zunongwangia profunda SM-A87] Length = 423 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 166/421 (39%), Positives = 234/421 (55%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + IR++ + ALKKR+ + +S + +LSLDE R +++D A N S QI Sbjct: 1 MLQVNNIREHKDAYIEALKKRNFDAESIFDEVLSLDETRRSTQSRLDDTLAESNKLSKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + LK +T LKE + + L+KL+ IPNVP E VP GTS Sbjct: 61 GLMFKNGEHQKANLLKEKTGKLKEDSRNYSEVLATTIADLEKLLYTIPNVPNEVVPAGTS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N I G P S H+E+ + ++DF+ K++GA F + G A L+RAL Sbjct: 121 EDDNEEIYKEGDVPVLAEGSLPHWELAKKYDIIDFELGNKVTGAGFPIYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 + +D E GY+E PL+V + + YGTGQ+P M+ T D ++IPT+EV +T Sbjct: 181 VSYFLD-KAVEAGYSEYQLPLMVNEASGYGTGQLPDKEGQMYHITADDLYMIPTAEVPIT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y ++ K P+ T P FR EAGS G RG+ R HQF K ELV I + EDS+ Sbjct: 240 NMYRDNLLTDKDFPIACTGYTPCFRREAGSYGAHVRGLNRLHQFDKVELVRIEKPEDSYA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ + +LK L L YR++ LC GDLGF++ TYD EV+ Q+ + EISS S Sbjct: 300 ALEGMVDHVKVLLKELKLPYRILRLCGGDLGFTSALTYDFEVFSTAQDRWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ RY++ K + HTLNGS +A+ R L ILENY +G + IP VL PY Sbjct: 360 TFQANRLKLRYKNKEGKK-ELVHTLNGSALALPRVLAGILENYQTENG-IKIPDVLVPYT 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|126696727|ref|YP_001091613.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] gi|166222760|sp|A3PE37|SYS_PROM0 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|126543770|gb|ABO18012.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] Length = 425 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 174/422 (41%), Positives = 256/422 (60%), Gaps = 8/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + IR+NP ++ L R + +I L K + + +I +++ S IGQ Sbjct: 1 MLDQKLIRENPTFVEENLSLRGKVYKISHIHELTVKKKEIDIEISSLQSESKKLSKLIGQ 60 Query: 61 AIAE---GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + N ++ LK + + + ++ LE+++ + + + +PN P ++ PIG Sbjct: 61 VIGKSQNNNSKELNDLKKKGNEYRIKISELEEKQRILDKEVDDEVYNLPNFPSKDAPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N+ I++ G P + H+EIGE+L L DF ++TK+S +RF L G+ A LERA Sbjct: 121 DESDNLQIKTWG-DPLIKENIKSHWEIGESLNLFDFVKSTKISKSRFVTLIGNGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSL 236 L FM+D+HT ++GY E+ P LV E++ G+GQ+PKF+ + C D WL PT+EV L Sbjct: 180 LINFMLDMHT-KNGYLELMPPALVNSESLTGSGQLPKFSNESFKCFNDDLWLSPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T + +E+I+ K LP+++ +P FR EAGS GRDT+G++R HQF K EL S Sbjct: 239 TAFHRNELIDPKKLPIKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYWFCDPSKSL 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++ S AE ILK+L+L YR+V +CTGDLGFS+ +T+DLEVWL YREISSCS C Sbjct: 299 EAHKKITSDAESILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSSKCYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + R K + HTLNGSG+A+GR + AILEN DGSV IP L PY Sbjct: 359 LDFQARRSSIR--SKIDKKNTYIHTLNGSGLAIGRTMAAILENGQQTDGSVKIPDALVPY 416 Query: 417 MN 418 Sbjct: 417 FG 418 >gi|325678148|ref|ZP_08157778.1| serine--tRNA ligase [Ruminococcus albus 8] gi|324110153|gb|EGC04339.1| serine--tRNA ligase [Ruminococcus albus 8] Length = 429 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 131/430 (30%), Positives = 215/430 (50%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ IR PE + ++K+ + + + D++ R + +++R +RN S Q Sbjct: 1 MIDIKLIRTEPELVKENIRKKFQDEKLVLVDEVAEFDKEYRAARTRADELRNQRNVKSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K E + + ++L LE +E E+ +++ + IPN+ E VPIG Sbjct: 61 IGALMGKGQKDEAEKVKAEVNAMAKELADLEVKEEELEGKIRERMLVIPNIIDESVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H +I E +D D A + SG F L G +A L A Sbjct: 121 DDSENVEIEKFGEPVVPDFEVPYHVDIMETFDGIDLDAARETSGNGFYYLKGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYYVPPFMIRSSVVTGVMSFAEMENMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIKTTLPEAQLPQTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 AWYDKLWQNSVDFFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + F HTLN + VA R LIA LEN LN DG+V+IP LR Y Sbjct: 360 GDAQARRLQIRVKGEDGSKY-FAHTLNNTVVAPPRMLIAFLENNLNGDGTVSIPEPLRMY 418 Query: 417 MNNLAVIKKE 426 M + Sbjct: 419 MGGKDKLVPT 428 >gi|183222806|ref|YP_001840802.1| seryl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912838|ref|YP_001964393.1| seryl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|238687768|sp|B0S8Z4|SYS_LEPBA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238687846|sp|B0SRZ1|SYS_LEPBP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|167777514|gb|ABZ95815.1| Serine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781228|gb|ABZ99526.1| Seryl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 418 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 193/419 (46%), Positives = 260/419 (62%), Gaps = 6/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI I QNPE L L+KR + E I S+ EK RIL ++E++RA RN S +I Sbjct: 1 MLDINRIVQNPEELLSTLQKRGVVSSDIEAKIKSVSEKQRILKLEVEELRAERNRVSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G ++G + + N + +++ +E+E + SL +L +PN+ VP G S Sbjct: 61 GIQKSQGK--DITEISNSMKGVGDRIKSIEEELTKEEESLHELNLGLPNLLDPSVPEGKS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+LIR G+ P ++ HF+IGE LG+ DF+R KLSGARF G A LER+L Sbjct: 119 EEDNVLIRQWGEIPKLSFEAKTHFDIGEKLGIFDFERGVKLSGARFYTYRGLGAKLERSL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 M+D HTSE+GY E+ P+LV DE+M TGQ+PKFA+D + DG LIPT+EV LT Sbjct: 179 MNLMLDTHTSENGYEEMWVPVLVNDESMTATGQLPKFAEDFYRLEKDGLNLIPTAEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y EII+ K LP+ FR EAGS GRDTRG++R HQF K ELV E S Sbjct: 239 NYYRDEIIQEKELPISVCAHTSCFRREAGSYGRDTRGLVRVHQFQKVELVKFVEPEKSGE 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 HE+ML AE IL++L L YRV+ LC+ D+ ++ KTYD+EVW+ G + EISS S Sbjct: 299 AHEKMLQDAESILQKLKLPYRVMLLCSKDMSSASSKTYDIEVWMPGLGRFMEISSVSNFK 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+RR RY+ K+L HTLNGSG+A+GR L A++ENY + DG+ IP VL+PY Sbjct: 359 DYQARRGKIRYKSKEGKNL-LVHTLNGSGLAIGRTLAAVIENYQSEDGTFQIPDVLKPY 416 >gi|242399373|ref|YP_002994797.1| Seryl-tRNA synthetase [Thermococcus sibiricus MM 739] gi|259516210|sp|C6A4A3|SYS_THESM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|242265766|gb|ACS90448.1| Seryl-tRNA synthetase [Thermococcus sibiricus MM 739] Length = 455 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 156/448 (34%), Positives = 248/448 (55%), Gaps = 27/448 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ IR+NP+ + L KR + + IL LD+K R +K+I ++R RN + + Sbjct: 1 MIDIKLIRENPDLIKGDLIKRGELEKLRWIDEILELDKKWRENLKEINNLRRERNKLAIE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ G +D L ++ + +++ +EKE + + + + +PN+ E VPIG Sbjct: 61 IGKRKKSG--EAIDELIKKSDNIAKRIEEIEKENNIIREKIDYYLWRLPNITHESVPIGK 118 Query: 118 SANENILIRSVGKKPSA--------------------IHLSREHFEIGEALGLMDFDRAT 157 EN+ IR GK H ++ +G D +RA Sbjct: 119 DDTENVPIRFWGKARVWEGHLETFLEQSQGKMKYETITWKPELHADLLPKIGGADLERAA 178 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K+SGARF L L L+ +L +F +D E G+ V P +VR G F D Sbjct: 179 KVSGARFFYLLNELVILDLSLIRFALD-KLIEKGFIPVIPPYMVRKYVEEGVTSFGDFED 237 Query: 218 DMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LIPTSE L ++S+EI++ +LP+ + ++P FR EAG+AG+DT+G+ Sbjct: 238 VIYKIEGEDLYLIPTSEHPLAGMHSNEILDGHNLPILYAGVSPCFRKEAGTAGKDTKGIF 297 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E R E+S+ HE++L AEEI + L++ YR+V++CTGDLG++A K YD Sbjct: 298 RVHQFHKVEQFVYARPEESWEWHEKLLQNAEEIFQALEIPYRIVNICTGDLGYAAAKKYD 357 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E W++ Q +RE+ SCS C +Q+RR+N R+RD ++ +F HTLN + +A R ++AI Sbjct: 358 IEAWMSAQGKFREVVSCSNCTEWQARRLNIRFRDKPNEKPRFVHTLNSTAIATSRAIVAI 417 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIK 424 +EN+ DG+V IP L PY ++ Sbjct: 418 IENFQEEDGTVKIPKALWPYTGFKEILP 445 >gi|157827781|ref|YP_001496845.1| seryl-tRNA synthetase [Rickettsia bellii OSU 85-389] gi|166223280|sp|A8GY58|SYS_RICB8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157803085|gb|ABV79808.1| seryl-tRNA synthetase [Rickettsia bellii OSU 85-389] Length = 426 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 208/424 (49%), Positives = 282/424 (66%), Gaps = 2/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L++R +EP ++ I LD K R + I++ + R S +G Sbjct: 1 MLNIKWIRENQELFDDKLRQRFIEPMAKRIEELDGKKRKITNLIQEFQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + + L+ + + E+L LE ++ + L +L++ +PN+P EEVP G + Sbjct: 61 INPK-SGEEFEGLQRDVKDINEKLEELE-QDLNNNNELNELLNTLPNIPDEEVPYGIDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N LIR+ G+ ++HFE+G L LMDF++ K+SGARF L G LA LERAL Sbjct: 119 MNKLIRTHGEVDLNAQNKKQHFELGVKLDLMDFEQTAKISGARFVTLKGDLAKLERALAN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E G+ EVS P+LVRD AMY +GQ+PKFAD+ F TT+G LIPT+EVSL N+ Sbjct: 179 FMLDVHTGEFGFLEVSPPVLVRDNAMYNSGQLPKFADESFATTNGYRLIPTAEVSLVNMV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R P FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 239 ADTIIPREKLPMRLVAYTPCFRSEAGSSGRDTRGMIRLHQFSKVELVSITTPEESKNEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 M + +E IL++L L YR + LCTGD+GF++ KTYD+EVWL GQ YREI+SCS CG+FQ Sbjct: 299 YMTNASETILQKLGLPYRTMLLCTGDMGFASQKTYDIEVWLPGQKQYREIASCSNCGDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+T+P VL YM L Sbjct: 359 ARRMKARYKEFGSHDTTLVHTLNASGLPIGRTMVAILENYQNEDGSITVPDVLVNYMGGL 418 Query: 421 AVIK 424 I Sbjct: 419 QKIT 422 >gi|15834727|ref|NP_296486.1| seryl-tRNA synthetase [Chlamydia muridarum Nigg] gi|270284894|ref|ZP_06194288.1| seryl-tRNA synthetase [Chlamydia muridarum Nigg] gi|270288922|ref|ZP_06195224.1| seryl-tRNA synthetase [Chlamydia muridarum Weiss] gi|13878799|sp|Q9PLJ7|SYS_CHLMU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|7190137|gb|AAF38982.1| seryl-tRNA synthetase [Chlamydia muridarum Nigg] Length = 428 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 166/429 (38%), Positives = 238/429 (55%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ P+ + L+K+ E +L LD+ R L E + ARR + S QI + Sbjct: 1 MLDIRLIRKEPKECEARLQKKDPSISLERLLDLDKNVRQLKADSESLLARRKALSGQIHK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A L + + +QL EK E + L L++ +PN P E+VP+ + Sbjct: 61 AKVA--NEDATPLIQGVNAIADQLVAFEKTLQEQEALLLDLMARLPNYPDEDVPVSPDKS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+S G+ P+ + H ++ E L ++DF K SG+ + LE AL Sbjct: 119 GNKIIKSHGEIPTFTFPPKHHVQLNEKLQILDFKLPAKTSGSGWPAYKNEGVLLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLT 237 ++++ HG+ PLLV+ + ++G+GQIPKF + +LIPT+EV L Sbjct: 179 YLLNKQ-QAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGEQSLFLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +S EI+ + LPL + P FR EAG+ G RG++R HQF K E+ + T E Sbjct: 238 GFHSQEILNEQDLPLYYAAFTPCFRREAGAGGSHERGLVRVHQFHKVEMFAFTTPEQEEI 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +++M+ EEIL L L Y++ L TGD+ F+A KT D EVWL GQ + E+SS S CG Sbjct: 298 AYQKMIGIVEEILSELQLPYQLSLLSTGDMSFTAKKTIDAEVWLPGQQAFYEVSSISKCG 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQSRR +RYRD K L F +TLNGSG+A R L+AILENY DGSV IP LRPYM Sbjct: 358 DFQSRRSETRYRDAQGK-LHFVNTLNGSGLATPRLLVAILENYQQEDGSVVIPHALRPYM 416 Query: 418 NNLAVIKKE 426 NN ++ + Sbjct: 417 NNQEILLPK 425 >gi|237784844|ref|YP_002905549.1| seryl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] gi|259511663|sp|C4LGQ1|SYS_CORK4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|237757756|gb|ACR17006.1| Seryl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] Length = 423 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 144/427 (33%), Positives = 241/427 (56%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R +P+ + + + R +P + +L D+ R I + RA + + +G Sbjct: 1 MIDLKQLRDDPDRVRESQRTRGEDPGLVDQLLQADQARREAISAADATRAEHKAYTKSMG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + + + L+ + + L + E+ + +S+ L I N+ Sbjct: 61 KKMRDASPEEKENLRAKGTELSNVVKEKEEAQRVAEASVHDLQMQISNIVEGAP--AGGE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +++ VG P ++H E+GE+LG++D +R K+SG+RF L G A L+ + Sbjct: 119 EDFVVVEKVGTPPQFDFEPKDHLELGESLGIIDMERGAKVSGSRFYFLKGAGALLQLGML 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 Q +HG+ + P++V E+M GTG + + AD+++ D ++L+ TSEV+L Sbjct: 179 QLAAQ-KAVQHGFELMITPVIVNPESMSGTGFLGQHADEIYYLQEDNQYLVGTSEVALAG 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EII+ + P R+ + FR EAGS G+DTRG+LR HQF K E+ S + ED+ E Sbjct: 238 YHSKEIIDLSAGPKRYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFSYCKPEDAAAE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+++LS E+L +++ YR++ + GDLG SA + +D E W+ QN YRE++S S C Sbjct: 298 HQKLLSMEREMLAAVEVPYRIIDVAGGDLGSSAARKFDTEAWVPTQNTYRELTSTSNCTT 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD N+K + TLNG+ +A R L+AILEN ADGSV +P L+PY+ Sbjct: 358 FQARRLGIRYRDENNK-TQIAATLNGT-LATTRWLVAILENNQQADGSVKVPEALQPYV- 414 Query: 419 NLAVIKK 425 V+K Sbjct: 415 GQDVLKP 421 >gi|167752847|ref|ZP_02424974.1| hypothetical protein ALIPUT_01108 [Alistipes putredinis DSM 17216] gi|167659916|gb|EDS04046.1| hypothetical protein ALIPUT_01108 [Alistipes putredinis DSM 17216] Length = 423 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 155/427 (36%), Positives = 242/427 (56%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I+ +R + E L K+ ++ P I LD++ + + ++++ A +N + QI Sbjct: 1 MLTIKQLRDDREAAIRRLAKKGVDAAPVIAEIEKLDDRRKAIQHELDECLATQNQAAKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + +G +A K E ++LKE+ L E EV +L+ I +PN P + VP G + Sbjct: 61 GALMGQGRRDEAEAKKAEVASLKERSNALNAEFKEVSDALQAAIVTLPNFPADIVPEGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N++++ V H+E+ ++DFD KL+GA F V G A L+RAL Sbjct: 121 AEDNLVVKLVESYTQLPENPLPHWELARKYDIIDFDLGVKLTGAGFPVYKGQGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 F +D +T GY EV P++V + + +GTGQ+P M+ T D +L+PT+EV +T Sbjct: 181 INFFLDCNT-RAGYLEVEPPVMVNEASGFGTGQLPDKEGQMYHATADNFYLVPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y I++ K P++ T P FR EAGS G+D RG+ R HQF K E+V ++ E S+ Sbjct: 240 NIYRDVILDEKDFPVKMTAYTPCFRREAGSYGKDVRGLNRLHQFDKVEIVQLSLPEKSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M++ E I+K L+L YR++ LC GD+ F++ TYD EV+ Q + E+SS S Sbjct: 300 ALDGMVAHVESIVKALELPYRILRLCGGDMSFTSALTYDFEVYSEAQKRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+ R+ RY+D + K + HTLNGS +A+ R + A+LEN DG + IP L PY Sbjct: 360 SFQANRLKLRYKDAD-KKTRLAHTLNGSSLALPRIVAALLENNQTPDG-IRIPEALIPYT 417 Query: 418 NNLAVIK 424 +IK Sbjct: 418 -GFDMIK 423 >gi|91204894|ref|YP_537249.1| seryl-tRNA synthetase [Rickettsia bellii RML369-C] gi|122426103|sp|Q1RKF4|SYS_RICBR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|91068438|gb|ABE04160.1| Seryl-tRNA synthetase [Rickettsia bellii RML369-C] Length = 426 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 209/424 (49%), Positives = 283/424 (66%), Gaps = 2/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L++R +EP ++ I LD K R + I++ + R S +G Sbjct: 1 MLNIKWIRENQELFDDKLRQRFIEPMAKRIEELDGKKRKITNLIQEFQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + + L+ + + E+L LE ++ + L +L++ +PN+P EEVP G + Sbjct: 61 INPK-SGEEFEGLQRDVKDINEKLEELE-QDLNNNNELNELLNTLPNIPDEEVPYGIDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N LIR+ G+ ++HFE+G L LMDF++ K+SGARF L G LA LERAL Sbjct: 119 MNKLIRTHGEVDLNAQNKKQHFELGVKLDLMDFEQTAKISGARFVTLKGDLAKLERALAN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E G+ EVS P+LVRD AMY +GQ+PKFAD+ F TT+G LIPT+EVSL N+ Sbjct: 179 FMLDVHTGEFGFLEVSPPVLVRDNAMYNSGQLPKFADESFATTNGYRLIPTAEVSLVNMV 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R P FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 239 ADTIIPREKLPMRLVAYTPCFRSEAGSSGRDTRGMIRLHQFSKVELVSITTPEESKNEHE 298 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 M + +E IL++L LHYR + LCTGD+GF++ KTYD+EVWL GQ YREI+SCS CG+FQ Sbjct: 299 YMTNASETILQKLGLHYRTMLLCTGDMGFASQKTYDIEVWLPGQKQYREIASCSNCGDFQ 358 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+T+P VL YM L Sbjct: 359 ARRMKARYKEFGSHDTTLVHTLNASGLPIGRTMVAILENYQNEDGSITVPDVLVNYMGGL 418 Query: 421 AVIK 424 I Sbjct: 419 QKIT 422 >gi|124008140|ref|ZP_01692838.1| seryl-tRNA synthetase [Microscilla marina ATCC 23134] gi|123986388|gb|EAY26201.1| seryl-tRNA synthetase [Microscilla marina ATCC 23134] Length = 424 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 150/427 (35%), Positives = 240/427 (56%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I IR + + + L+KR + E + +L D + + K+++++A N+ + + Sbjct: 1 MLQIPHIRTHQQKVIEGLQKRGVKNAEDLVDQVLEYDTQRKNTQTKLDNLKASSNNQAKR 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + +G D LK + K+++ LE + V + +++ +PN+P VP G Sbjct: 61 IGQLMKQGKKVEADKLKQQVGGSKQEVKDLEAKLKIVSNKRDEVLYKLPNIPHPSVPKGN 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N + G P+ + H+++ + ++DF+ TK++GA F V G A L+RA Sbjct: 121 TDADNKVESEHGSVPTLHDKAVPHWDLIKQYDIIDFEVGTKITGAGFPVYKGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSL 236 L F +D GY+EV P LV ++ +GTGQ+P M+ + +LIPT+EV + Sbjct: 181 LINFFLDEAV-NAGYSEVIPPYLVNQDSGFGTGQLPDKDGQMYHAQEDGLYLIPTAEVPI 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+E LP++ P FR EAG+ G RG+ R HQF K E+V I E S+ Sbjct: 240 TNMYRDVIVEETDLPIKHVGYTPCFRREAGAWGAQVRGLNRLHQFDKVEIVQIQHPEKSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 M + + +L++LDL YRV+ LC+GDLGF++ T+D+EV+ A Q + E+SS S Sbjct: 300 ETLNEMCTHVQGLLQKLDLPYRVLRLCSGDLGFTSALTFDMEVYSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+ RM RYR ++K FTHTLNGS +A+ R + A+LEN +G + +P VL+PY Sbjct: 360 ETFQANRMKLRYRTGDNKK-HFTHTLNGSALALPRIVAALLENNQTPEG-IKVPAVLQPY 417 Query: 417 MNNLAVI 423 +I Sbjct: 418 T-GFDII 423 >gi|15221121|ref|NP_172651.1| SRS (SERYL-TRNA SYNTHETASE); serine-tRNA ligase [Arabidopsis thaliana] gi|332190686|gb|AEE28807.1| Seryl-tRNA synthetase [Arabidopsis thaliana] Length = 512 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 142/440 (32%), Positives = 234/440 (53%), Gaps = 19/440 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N E ++I ++ R+ E +L L E L K++E +R RN+ + + Sbjct: 77 IDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEVERLREERNNVAK---KM 133 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S + L E LKE L LE++ ++ L+ + IPN+ +VP+G + Sbjct: 134 KGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHPDVPVGGEDSS 193 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + VG ++H ++G+ L L+DFD A ++SG++F L LE AL + Sbjct: 194 -AIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLLEMALLNW 252 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--GRWLIPTSEVSLTNL 239 + + GYT ++ P +VR + G P+ + + D + LI T+E+ + + Sbjct: 253 TLS-QVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTDQCLIGTAEIPVGGI 311 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+ +LPL++ + FR+EAG+AG T+G+ R HQF K E+ I + EDS + H Sbjct: 312 HMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQPEDSESFH 371 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + ++ E++ L LH++ + + T DLG A + +D+E W+ G + EISS S C ++ Sbjct: 372 QELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMPGLGRFGEISSASNCTDY 431 Query: 360 QSRRMNSRYR--------DPNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 QSRR+ RYR K + KF HTLN + AV R ++ +LENY DGSV Sbjct: 432 QSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVPRMMVCLLENYQQEDGSV 491 Query: 408 TIPTVLRPYMNNLAVIKKEH 427 IP LRP+M + +IK +H Sbjct: 492 VIPEPLRPFMGGIELIKPKH 511 >gi|154496097|ref|ZP_02034793.1| hypothetical protein BACCAP_00381 [Bacteroides capillosus ATCC 29799] gi|150274652|gb|EDN01716.1| hypothetical protein BACCAP_00381 [Bacteroides capillosus ATCC 29799] Length = 433 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 142/435 (32%), Positives = 222/435 (51%), Gaps = 12/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI++IR+NPE + +KK+ + P + +L LD NR + + ++RA RN+ S Q Sbjct: 1 MLDIRFIRENPEAVKENIKKKFQDAKLPLVDKVLELDAANRAAMTEANELRASRNTLSKQ 60 Query: 58 IGQAIAEGNL-----SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 IG + + +A+K + ++L LE++E ++ ++ ++ IPN+ Sbjct: 61 IGMLMGQAKKDPSKLEEAEAVKAQVKANADRLAELEEQEVKLAEEIRHIMLQIPNIIDPS 120 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VPIG + N+ + G+ + H +I E +D D A ++SG F L G +A Sbjct: 121 VPIGPDDSCNVEVERFGEPVTPDFEIPYHTQIMETFNGVDMDAAGRVSGNGFYYLMGDIA 180 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPT 231 L A+ + D G+T P ++ + G + M+ + +LI T Sbjct: 181 RLHSAVLAYARDFMI-NKGFTYCIPPFMIHGNVVEGVMSQTEMDAMMYKIEGEDLYLIGT 239 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 SE S+ + +II +LP T+ +P FR E GS G + RG+ R HQF K E+V + + Sbjct: 240 SEHSMIGKFIDQIIPEDNLPQTLTSYSPCFRKEKGSHGIEERGVYRIHQFEKQEMVVVCK 299 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS +E+M + E+ + LD+ R + C+GDL K+ D+E W Q Y E+ Sbjct: 300 PEDSMAWYEKMWRFSVELFRSLDIPVRQLECCSGDLADLKVKSCDIEAWSPRQQKYFEVC 359 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS G+ Q+RR+ R + + HTLN + VA R LIA LEN L ADGSV IP Sbjct: 360 SCSNLGDAQARRLKMRVKGEKG--MYLPHTLNNTVVAPPRMLIAFLENNLQADGSVKIPV 417 Query: 412 VLRPYMNNLAVIKKE 426 LRPYM V+ + Sbjct: 418 ALRPYMGGQEVLVPK 432 >gi|160879264|ref|YP_001558232.1| seryl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|160427930|gb|ABX41493.1| seryl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 425 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 141/428 (32%), Positives = 226/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + +K + + P + +++LD ++R + +++RA RN+ S + Sbjct: 1 MLDLKFVRENPEVVRQNIKNKFQDHKLPLVDEVIALDVESRNAKGEADNLRADRNAISKK 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + E+L LE+ E+E+ +K ++ +PN+ VPIG Sbjct: 61 IGGLMAQGKREEAEEMKQLVTKESERLAELEERENELQERIKTIMMTLPNIIDASVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIKRYGEPVVPDFEIPYHAEIMEKFNGLDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCIPPFMIRSDVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I+ ++LP T+ +P FR E G+ G + RG+ R HQF K E++ + EDS Sbjct: 240 IGKFIDTILPEETLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCNPEDSM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E++ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFEKLWENTVDLFRSLDIPVRTLECCSGDLADLKVKSIDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N K F HTLN + VA R LIA LEN LN DGS+ IP L+PY Sbjct: 360 GDAQARRLKIRVVGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSINIPKALQPY 417 Query: 417 MNNLAVIK 424 M VIK Sbjct: 418 MGGKTVIK 425 >gi|332654801|ref|ZP_08420543.1| serine--tRNA ligase [Ruminococcaceae bacterium D16] gi|332516144|gb|EGJ45752.1| serine--tRNA ligase [Ruminococcaceae bacterium D16] Length = 433 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 136/435 (31%), Positives = 221/435 (50%), Gaps = 12/435 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NP+ + +KK+ + P + +L LD +NR I + +++R +RN+ S Q Sbjct: 1 MLDIKFVRENPDVVKENIKKKFQDQKLPLVDEVLELDSQNRAAIAEAQELRTQRNALSKQ 60 Query: 58 IGQAIAEGNLS-----LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +G + + + K + ++L LE E E+ ++ ++ IPN+ Sbjct: 61 VGILMGQAKKDPSKLQEAEEAKAKVKANADRLAELEALETELAQKIRHIMLQIPNIIDPS 120 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VPIG + N+ ++ G+ + H +I E+ +D D A ++SG F L G +A Sbjct: 121 VPIGPDDSANVEVQRFGEPVTPDFDIPYHTQIMESFNGIDMDAAGRVSGNGFYYLMGDIA 180 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPT 231 L + + D + G+T P ++ + G + M+ + +LI T Sbjct: 181 RLHEGVLAYARDFMI-DKGFTFCIPPFMIHGNVVEGVMSQTEMDAMMYKIEGEDLYLIGT 239 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 SE S+ + +I+ LP T+ +P FR E G+ G + RG+ R HQF K E+V + + Sbjct: 240 SEHSMIGKFIDQILTEDQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVVCK 299 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS +E+M + E+ + LD+ R + C+GDL K+ D+E W Q Y E+ Sbjct: 300 PEDSMDWYEKMWRYSVELFRSLDIPVRQLECCSGDLADLKVKSCDIEAWSPRQQKYFEVC 359 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS G+ Q+RR+ R + HTLN + VA R LIA LEN L ADGSV IP Sbjct: 360 SCSNLGDAQARRLKMRVKGEKG--TYLPHTLNNTVVAPPRMLIAFLENNLQADGSVKIPE 417 Query: 412 VLRPYMNNLAVIKKE 426 VLRPYM ++ + Sbjct: 418 VLRPYMGGKELLIPK 432 >gi|161611303|ref|YP_008487.2| seryl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] Length = 426 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 169/429 (39%), Positives = 249/429 (58%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DI+ IR++ ++ LK + + I LD R K+E ++A+RN S +IG+ Sbjct: 1 MIDIRLIRKDRFAVEKQLKTKDPQIDLTNICHLDHSIREAKTKVETLKAKRNEISQKIGE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +L NE + ++ L+ + E +S +PN+P+E++ I Sbjct: 61 MKRANQDTF--SLMNEVAGFGTEIHFLDNQIKEWEEQFNYELSSLPNLPMEDIKISQDPK 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN++I+ G+KP + H E+ E L L DF R K+SG + V A LE AL Q Sbjct: 119 ENVVIKEFGQKPIFSFPFKNHVELNEKLNLFDFKRGAKISGTGWPVYRAMGARLEWALIQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSLT 237 +MI++H ++G+T+ PLLVR ++G+GQ+PKF F D +LIPT+EV L Sbjct: 179 YMIEIHV-KNGFTQWIPPLLVRKNTVFGSGQLPKFESQQFKIQDEDYHLYLIPTAEVPLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 L+ EII + L L++ P FR EAG+AG RG++R HQF K E+ T+ E+S Sbjct: 238 GLHMDEIIPQEELSLKYVAYTPCFRREAGAAGSQERGLIRMHQFNKVEMFCFTKPEESAQ 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +M+ AEEIL+ L+LHYR L TGD+ F+A +T D+EVWL GQN Y E+SS S C Sbjct: 298 VFNQMMDSAEEILQGLELHYRNALLVTGDMSFAAARTIDIEVWLPGQNRYYEVSSVSNCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++QSRR N+R+R + K L F HTLNGSG+A R ++A+LEN DGSV IP VL+ Y+ Sbjct: 358 DYQSRRSNTRFRREDGK-LDFVHTLNGSGLATSRLMVALLENNQREDGSVCIPNVLQRYL 416 Query: 418 NNLAVIKKE 426 N + + Sbjct: 417 NGQSTLNPT 425 >gi|26553858|ref|NP_757792.1| seryl-tRNA synthetase [Mycoplasma penetrans HF-2] gi|30173161|sp|Q8EW01|SYS_MYCPE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|26453865|dbj|BAC44196.1| seryl-tRNA synthetase [Mycoplasma penetrans HF-2] Length = 426 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 177/427 (41%), Positives = 261/427 (61%), Gaps = 3/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M++ IR + + L+ +LK R+ + + LD+K L+ IE +RN S IG Sbjct: 1 MINKSIIRNDFKTLETSLKNRNSKLDISSLKDLDKKQSELLLIIESCNKKRNEISKSIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 I + + VD LK E ++K L +E + + + ++ IPN+P VPIG S + Sbjct: 61 YIGKKDNKKVDELKKEMESIKNTLETTNEELKTISAKVDDILLSIPNIPDSSVPIGKSED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ I+ G + H+++ L + DF+RATK++G+RF + G + L RAL Sbjct: 121 ENVEIKKWGTPTKFDFNHKAHWDLITDLDIGDFERATKVTGSRFFIYKGLGSKLMRALQM 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 +D++T +GY E+S P++V ++ TGQ+PKF +D+F +L PT EV LTN Sbjct: 181 LTLDINT-SNGYLEMSLPVIVNSASLTSTGQLPKFKEDLFALENSDYYLSPTLEVQLTNY 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y +EI+E +LP++FT + +FRSEAGSAG+DTRG++RQHQF+K ELV++ E S+ Sbjct: 240 YRNEILEESALPMKFTASSLNFRSEAGSAGKDTRGIIRQHQFYKTELVNLVHPEKSYQAL 299 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M AE IL+ L+L YR + LCTGD+GFS+ KTYD+EVWL N Y+EISSCS C +F Sbjct: 300 EEMTLNAESILEALELPYRRILLCTGDMGFSSSKTYDIEVWLPSYNSYKEISSCSNCLDF 359 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R+++ + + HTLNGS +A+ R A++ENY N DGS+TIP L YM Sbjct: 360 QARRSMIRFKNSKTNKNELVHTLNGSSLALDRLFAAVVENYQNKDGSITIPKALVKYM-G 418 Query: 420 LAVIKKE 426 + IKK Sbjct: 419 IDSIKKT 425 >gi|149369572|ref|ZP_01889424.1| seryl-tRNA synthetase [unidentified eubacterium SCB49] gi|149356999|gb|EDM45554.1| seryl-tRNA synthetase [unidentified eubacterium SCB49] Length = 423 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 156/421 (37%), Positives = 237/421 (56%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + I++N + +AL+KR ++ P E +SLDE+ R K+++ A N S +I Sbjct: 1 MLQVHEIKENKDAYVVALQKRGIDAQPLLEEAISLDEQRRTTQAKLDETLAEANVLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + LK +T LKE L + + +L+KL+ IPN+P + VP G + Sbjct: 61 GNLFKSGKAQEANVLKEKTGELKEASKELGGQLDSISETLQKLLWTIPNIPNDLVPAGMT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N G P + H+E+ + ++DF+ K++GA F V G A L+RAL Sbjct: 121 EDDNEETFREGDIPVLHEGALPHWELAKKYDIIDFELGVKITGAGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T + GY EV PLLV + + +GTGQ+P M+ D +LIPT+EV +T Sbjct: 181 INYFLDKNT-DAGYKEVQVPLLVNEASGFGTGQLPDKEGQMYHVGVDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ +++ LP+ T P FR EAGS G RG+ R HQF K E+V + ++S+ Sbjct: 240 NMFRDNLVQESDLPITCTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRVEHPDNSYK 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ EIL+ L L +R++ LC GDLGF++ TYD EV+ Q+ + EISS S Sbjct: 300 ALDGMVDHITEILRELKLPFRILRLCAGDLGFTSALTYDFEVFSTAQDRWLEISSASNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R++D + K+ K HTLNGS +A+ R L ILENY +G + IP VL PY Sbjct: 360 AFQANRLKLRFKDSDGKN-KLAHTLNGSSLALPRVLAGILENYQTPEG-IKIPEVLVPYC 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|115486243|ref|NP_001068265.1| Os11g0610900 [Oryza sativa Japonica Group] gi|108864576|gb|ABA94784.2| seryl-tRNA synthetase family protein, expressed [Oryza sativa Japonica Group] gi|113645487|dbj|BAF28628.1| Os11g0610900 [Oryza sativa Japonica Group] Length = 509 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 141/441 (31%), Positives = 230/441 (52%), Gaps = 21/441 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR+N + + ++ R+ + +L L ++ L K++E +RA RN+ + + Sbjct: 72 IDFKWIRENTDAVAANIRDRNSAANLDLVLQLYDEYLALQKEVERLRAERNAVA---NKM 128 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S+ AL E LKE L LE++ ++ L+ IPN + P+G + Sbjct: 129 KGKLEPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDAPVGGEESS 188 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 ++ + VG + + R+H ++G+ L L DFD A ++SG++F L LE AL + Sbjct: 189 -VVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNW 247 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 I S+ G+T + P +VR + G P+ + + LI T+E+ + + Sbjct: 248 AITE-VSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQVYSIDNSDQCLIGTAEIPVGGI 306 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+ LP ++ + FR+EAG+AG TRG+ R HQF K E+ R E+S H Sbjct: 307 HMDSILPDSDLPRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEESDKCH 366 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E +++ EE+ L LH++ + + TGDLG A + +D+E W+ G + Y EISS S C ++ Sbjct: 367 EELITIEEELYASLGLHFKTLDMATGDLGAPAYRKFDIEAWMPGLDRYGEISSASNCTDY 426 Query: 360 QSRRMNSRYRD----------PNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 QSRR+ R+R K +F HTLN + VAV R +I ILEN+ DG Sbjct: 427 QSRRLGIRFRPSPADPPPANAKKGKGSSGPTQFVHTLNATAVAVPRLIICILENFQQEDG 486 Query: 406 SVTIPTVLRPYMNNLAVIKKE 426 +V IP LRP+M L V+ + Sbjct: 487 TVVIPEPLRPFMGGLEVLSPK 507 >gi|42519946|ref|NP_965861.1| seryl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] gi|67461816|sp|Q73IW5|SYS_WOLPM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|42409683|gb|AAS13795.1| seryl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 425 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 215/427 (50%), Positives = 293/427 (68%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI++IR+NPE + A+K R + E +E IL +D + R L K++D+ +RN + +I Sbjct: 1 MHDIEYIRKNPEGFEKAMKSRGIRESTAEEILEIDHEKRSLTTKLQDLNRQRNEITEEIK 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + S + + ++ ++ + +E L ++S +PN+P ++VPIG Sbjct: 61 KLKMS--KSPCEEQIELSKSITNEIEAISLKEQAEKDKLVNVLSNLPNIPAQDVPIGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N N+ +R G K + H+E+GE LGLMDF++A ++SG+RF++L G LA L RAL Sbjct: 119 NSNLEVRRYGGKRQFDFVPESHYELGEKLGLMDFEQAARISGSRFTILKGQLAKLGRALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 M+++H +E GYTEV P LV++EAMY GQ+PKF+DD + TTD LIPTSEV LTNL Sbjct: 179 NCMLEMHVNEFGYTEVYHPALVKNEAMYNVGQLPKFSDDSYLTTDELRLIPTSEVFLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + +I+E K LP+RFT + FR EAGSAGRDTRGM+RQHQF K ELVSIT E+ S E Sbjct: 239 VADKIMEEKELPIRFTAYSECFRKEAGSAGRDTRGMIRQHQFGKVELVSITTEDQSNDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ERM S AEEILK+L+L YRV+ LC+GD+GF+A +TYD+EVWL GQN YREISSCS CG F Sbjct: 299 ERMTSVAEEILKKLELPYRVMLLCSGDMGFAAQRTYDIEVWLPGQNKYREISSCSNCGAF 358 Query: 360 QSRRMNSRYRDPNSKS-LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RRMN++Y K K+ HTLNGS +A+GR +IAI+ENY N+DGS+ IP VL+ YM+ Sbjct: 359 QARRMNTKYSSETDKKMKKYIHTLNGSALAIGRTIIAIMENYQNSDGSIAIPNVLQKYMS 418 Query: 419 NLAVIKK 425 N VI K Sbjct: 419 NDTVISK 425 >gi|302559736|ref|ZP_07312078.1| seryl-tRNA synthetase [Streptomyces griseoflavus Tu4000] gi|302477354|gb|EFL40447.1| seryl-tRNA synthetase [Streptomyces griseoflavus Tu4000] Length = 425 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 148/429 (34%), Positives = 237/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE+ R + +++RA + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L T L + + + S + L+ + N+ +VP+G Sbjct: 61 KAAGDEKAE----LLERTGRLAADVKAADADRDAAASETQDLLLKLSNLVHPDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + R+H E+G+ L +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVTLETHGTIRDFDAEGFAPRDHLELGQLLAAIDVERGAKVSGSRFYFLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L + + G+T + P LVR ++M GTG + + A D++ D +L+ TSEV+L Sbjct: 177 LVNAAMAQ-ATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLDKDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII++ LPLR+ +P FR EAGS G+DTRG+ R HQF K E+ S EDS Sbjct: 236 AAYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQ 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L ++ L L+L +RV+ + +GDLG SA + YD E W+ Q YRE++S S C Sbjct: 296 AEHQRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARKYDCEAWIPTQGKYRELTSTSDC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +QSRR++ R R K ++ TLNG+ AV R ++AILEN+ ADGSV +P VLRPY Sbjct: 356 TEYQSRRLSIRLR--EDKKVRPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPY 413 Query: 417 MNNLAVIKK 425 + +++ Sbjct: 414 LGGREILEP 422 >gi|157826236|ref|YP_001493956.1| seryl-tRNA synthetase [Rickettsia akari str. Hartford] gi|166223279|sp|A8GPX3|SYS_RICAH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157800194|gb|ABV75448.1| seryl-tRNA synthetase [Rickettsia akari str. Hartford] Length = 425 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 208/424 (49%), Positives = 282/424 (66%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML I+WIR+N E D L KR +EP S I LD + R + I++ + R S +G Sbjct: 1 MLSIKWIRENQELFDEKLSKRFIEPMSSKIAMLDGEKRKITSLIQEFQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A + +A++ + + E+L LE++ + + L +PN+P EEVP G + Sbjct: 61 -MASKSGEEFEAIQRDVKHINEKLEELEQDLNNNNELNELLNM-LPNIPDEEVPYGMDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+R+ G + + L+++HFE+G L LMDF++ K+SGARF L G LA LERAL Sbjct: 119 MNKLVRTYG-ETNPNALNKQHFELGTKLNLMDFEQTAKISGARFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT E + E+S P+LVRD AMY +GQ+PKFA++ F TT+G LIPT+EV L N+ Sbjct: 178 FMIDVHTKEFNFFEMSPPVLVRDNAMYNSGQLPKFAEESFATTNGYRLIPTAEVFLVNIV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R+ P FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 238 ADTIIPREKLPMRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESKHEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E IL++L+L YRV+ LCTGD+GF+A KTYD+EVWL GQ YREI+SCS CG+FQ Sbjct: 298 YITNSSETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNEDGSITIPDVLINYMGGL 417 Query: 421 AVIK 424 I Sbjct: 418 QKIT 421 >gi|33635224|emb|CAE21549.1| putative seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] Length = 429 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 176/429 (41%), Positives = 259/429 (60%), Gaps = 9/429 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD + +R NP+ + L +R + + + ++ R L ++ ++A N ++GQ Sbjct: 6 LDQRLVRDNPDLIANELGRRGITLDLTGLQLIAQQQRNLEEQRSSLQAEGNRIGKEVGQR 65 Query: 62 IAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 I +G S V L+ + + +K+++ +LE EE ++ + L++ + +PN+P + P G Sbjct: 66 IQQGSDPKASDVAELRQQGNLIKQKVAVLEDEEKQLSARLREQLLSLPNLPSPDCPEGRD 125 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+N G KP EH+ I E L L + +R+ +++ +RF L G A LERAL Sbjct: 126 ENDNQERHRWG-KPREGKDLLEHWSIAERLKLFETERSVRIAQSRFVTLMGQGARLERAL 184 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLT 237 FM+DLHT GY EV P+LV ++ G+GQ+PKFA++ F C D WL PT+EV +T Sbjct: 185 INFMLDLHT-SKGYREVMPPVLVNTASLTGSGQLPKFAEESFRCAEDDLWLTPTAEVPVT 243 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +L+ EII ++ LPLR+ +P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 244 SLHRDEIIPAEQLPLRYAAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVHPDHSQA 303 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H ++ + AE +L+ L+L YRV+ LCTGDLGFS+ +TYDLEVWL G +REISSCS CG Sbjct: 304 AHAQITADAEAVLQALELPYRVIELCTGDLGFSSSRTYDLEVWLPGAGAFREISSCSICG 363 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R +D + HTLNGSG+AVGR + A+LE +DGSV +P L PY Sbjct: 364 DFQARRSAIRTKDEKG--TRLIHTLNGSGLAVGRTMAALLETGQQSDGSVLLPKALVPYF 421 Query: 418 NNLAVIKKE 426 N ++ E Sbjct: 422 GN-DRLEPE 429 >gi|41327072|emb|CAF20916.1| SERYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032] Length = 432 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 148/427 (34%), Positives = 243/427 (56%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R NP+ + + R +P + ++S DE R IK +D+RA + + +IG Sbjct: 11 MIDLKFLRDNPDVVRASQITRGEDPALVDELISADESRREAIKAADDLRAEQKAFGKKIG 70 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L ++ LK ++ E + + + +L + NV Sbjct: 71 QASPEDRPA----LLEGSNELKAKVKDAEAAQEAAEAKVNELQMKLSNVVSGAP--AGGE 124 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +++ ++G+ + ++H E+GE+LGL+D R TK+SGARF LTG A L+ + Sbjct: 125 DDFVVLETIGEPRTFDFEPKDHLELGESLGLIDMKRGTKVSGARFYYLTGDGAMLQLGML 184 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 E G++ + P+LVR E M GTG + +++++ D +L+ TSEV+L Sbjct: 185 MLAAQ-KAREAGFSMMIPPVLVRPEIMAGTGFLGDHSEEIYYLERDDMYLVGTSEVALAG 243 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ P+++ + FR EAGS G+DTRG+LR HQF K E+ + ED+ Sbjct: 244 YHKDEIIDLNEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYCKPEDAEDV 303 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+++L +E+L +++ YRV+ + GDLG SA + +D E W+ Q+ YRE++S S C Sbjct: 304 HQQLLGMEKEMLAAIEVPYRVIDVAGGDLGASAARKFDTEAWVPTQDTYRELTSTSNCTT 363 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD N K + TLNG+ +A R L+AILEN ADGSV +P LRP++ Sbjct: 364 FQARRLQTRYRDENGK-PQIAATLNGT-LATTRWLVAILENNQQADGSVVVPEALRPFV- 420 Query: 419 NLAVIKK 425 V+K Sbjct: 421 GKDVLKP 427 >gi|23308986|ref|NP_602083.2| seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|145296881|ref|YP_001139702.1| seryl-tRNA synthetase [Corynebacterium glutamicum R] gi|161486716|ref|YP_227132.2| seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|30173172|sp|Q8NLP6|SYS_CORGL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|21325666|dbj|BAC00287.1| Seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|140846801|dbj|BAF55800.1| hypothetical protein [Corynebacterium glutamicum R] Length = 422 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 148/427 (34%), Positives = 243/427 (56%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R NP+ + + R +P + ++S DE R IK +D+RA + + +IG Sbjct: 1 MIDLKFLRDNPDVVRASQITRGEDPALVDELISADESRREAIKAADDLRAEQKAFGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L ++ LK ++ E + + + +L + NV Sbjct: 61 QASPEDRPA----LLEGSNELKAKVKDAEAAQEAAEAKVNELQMKLSNVVSGAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +++ ++G+ + ++H E+GE+LGL+D R TK+SGARF LTG A L+ + Sbjct: 115 DDFVVLETIGEPRTFDFEPKDHLELGESLGLIDMKRGTKVSGARFYYLTGDGAMLQLGML 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 E G++ + P+LVR E M GTG + +++++ D +L+ TSEV+L Sbjct: 175 MLAAQ-KAREAGFSMMIPPVLVRPEIMAGTGFLGDHSEEIYYLERDDMYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ P+++ + FR EAGS G+DTRG+LR HQF K E+ + ED+ Sbjct: 234 YHKDEIIDLNEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYCKPEDAEDV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+++L +E+L +++ YRV+ + GDLG SA + +D E W+ Q+ YRE++S S C Sbjct: 294 HQQLLGMEKEMLAAIEVPYRVIDVAGGDLGASAARKFDTEAWVPTQDTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD N K + TLNG+ +A R L+AILEN ADGSV +P LRP++ Sbjct: 354 FQARRLQTRYRDENGK-PQIAATLNGT-LATTRWLVAILENNQQADGSVVVPEALRPFV- 410 Query: 419 NLAVIKK 425 V+K Sbjct: 411 GKDVLKP 417 >gi|86140926|ref|ZP_01059485.1| seryl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] gi|85832868|gb|EAQ51317.1| seryl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] Length = 422 Score = 368 bits (944), Expect = e-99, Method: Composition-based stats. Identities = 164/426 (38%), Positives = 228/426 (53%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + IR + E AL KR+ E + + +L LDEK R +++ A N S +I Sbjct: 1 MLHVTDIRDHKEAYIQALTKRNFEASAIFDQVLELDEKRRSTQASLDNTLAESNKLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + LK T LKE L++ L++L+ IPN+P + VP G S Sbjct: 61 GMLFKNGEAQKANLLKERTGKLKEDSKNLQEVLSATVEELEQLLYTIPNIPQDSVPAGKS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N + G P S H+E+ + ++DF+ TK++GA F V G A L+RAL Sbjct: 121 DEDNEEVFRKGDVPVLAEGSLPHWELAKKYDIIDFELGTKVTGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T GY EV P LV + + +GTGQ+P M+ D +LIPT+EV +T Sbjct: 181 INYFLDKNT-AAGYNEVQVPHLVNEASGFGTGQLPDKEGQMYHIGIDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++E K LP+ T P FR EAGS G RG+ R HQF K E+V I + EDS Sbjct: 240 NMFRDSLLEEKDLPITCTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEKAEDSDA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + IL L L YR++ LC GDLGF++ TYD EV+ Q+ + EISS S Sbjct: 300 ALDGMVEHVKMILDELKLPYRILRLCGGDLGFTSTLTYDFEVFSTAQDRWLEISSVSNFK 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ RYRD + HTLNGS +A+ R L ILENY DG + IP VL PY Sbjct: 360 TFQANRLKLRYRDAEGNK-QLAHTLNGSSLALPRVLAGILENYQTEDG-INIPEVLIPYC 417 Query: 418 NNLAVI 423 I Sbjct: 418 -GFDKI 422 >gi|149277075|ref|ZP_01883217.1| serine-tRNA synthetase [Pedobacter sp. BAL39] gi|149231952|gb|EDM37329.1| serine-tRNA synthetase [Pedobacter sp. BAL39] Length = 423 Score = 368 bits (944), Expect = e-99, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 235/427 (55%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + +IR+N E + L +R+ + + I+ +DE+ R ++ + A N+++ QI Sbjct: 1 MLQVNYIRENREKVLEGLSRRNFKQPELVDEIIKIDEERRNTQTSLDQLSAVANASAKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ + G + LK+ET+ KE + L L +LI +PN+P VP G++ Sbjct: 61 GELMRNGKKEEAEVLKSETTANKENIKNLSDVLATAEEKLYQLIVQLPNIPYHLVPAGST 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A EN ++ G+ + H+E+ ++DF+ TK++GA F V G A L+RAL Sbjct: 121 AEENEVVYVHGEPAVLPENAMPHWELTAKYDIIDFELGTKITGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 F +D H + GY E+ P LV + + +GTGQ+P M+ D +LIPT+EV +T Sbjct: 181 INFFLD-HATAEGYKEMQVPHLVNEASGFGTGQLPDKEGQMYHAGVDNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY I++ + LP++ T P FR EAGS G RG+ R HQF K E+V + E S+ Sbjct: 240 NLYRDVILKEEELPVKNTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEVVQVVHPEKSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E+M + +L+ L LHYRV+ LC GD+GF++ TYD+EVW A Q + E+SS S Sbjct: 300 VLEQMSVYVQSLLQELGLHYRVLRLCGGDMGFTSAMTYDMEVWSAAQQRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +QS R+ R++ K + HTLNGS +A+ R + +ILEN G + IP L Y Sbjct: 360 TYQSNRLKLRFKGATGK-TQLAHTLNGSALALPRIVASILENNQTEKG-IKIPEALVKYT 417 Query: 418 NNLAVIK 424 I+ Sbjct: 418 -GFEYIE 423 >gi|15893139|ref|NP_360853.1| seryl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|30173197|sp|Q92GA7|SYS_RICCN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|15620347|gb|AAL03754.1| seryl-tRNA synthetase [Rickettsia conorii str. Malish 7] Length = 425 Score = 368 bits (944), Expect = e-99, Method: Composition-based stats. Identities = 206/423 (48%), Positives = 280/423 (66%), Gaps = 3/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L +R +EP S I LD + R + I++ + R S +G Sbjct: 1 MLNIKWIRENKELFDEKLSQRFIEPMSSKIAMLDGEKRKITSLIQEFQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A + + L+ + + E+L LE++ + + L PN+P +EVP G + Sbjct: 61 -MASKSGEEFEGLQRDVKHINEKLEALEQDLNNNNELNELLNM-FPNIPDDEVPYGMDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+R+ G + + L+++HFE+G L LMDF++ K+SG RF L G LA LERAL Sbjct: 119 MNKLVRTYG-ETNPNALNKQHFELGIKLNLMDFEQTAKISGTRFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT E + E+S P+LVRD AMY GQ+PKFA++ F TT+G LIPT+EVSL N+ Sbjct: 178 FMIDVHTKEWDFFEISPPVLVRDNAMYNAGQLPKFAEESFATTNGYRLIPTAEVSLVNMV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R+ P FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 238 ADTIIPREKLPIRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESTNEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E IL++L+L YRV+ LCTGD+GF+A KTYD+EVWL GQ YREI+SCS CG+FQ Sbjct: 298 YITNASETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNEDGSITIPDVLINYMGGL 417 Query: 421 AVI 423 I Sbjct: 418 QKI 420 >gi|255324118|ref|ZP_05365242.1| serine--tRNA ligase [Corynebacterium tuberculostearicum SK141] gi|311740372|ref|ZP_07714201.1| serine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] gi|255298819|gb|EET78112.1| serine--tRNA ligase [Corynebacterium tuberculostearicum SK141] gi|311304556|gb|EFQ80630.1| serine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] Length = 418 Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 148/428 (34%), Positives = 245/428 (57%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + R +P + +L DE+ R I+K +++R+ + + +IG Sbjct: 1 MIDLKLLRENPDVVRASQVNRGEDPSLVDQLLEADEQRRAAIQKADELRSEQKAFGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L ++ LK ++ E+ + + +++L + NV Sbjct: 61 QASPEERPA----LLEGSNELKAKVKEAEEAQSAAEAKVEELQYKLDNVVEGAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ ++I VG+ P ++H E+GE+LGL+D R K+ GARF LTG A L+ + Sbjct: 115 DDFVVIEEVGQIPEFDFEPKDHLELGESLGLIDVKRGAKVGGARFYYLTGDGAFLQLGML 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 E G+ + P+LVR + M GTG + + +D+++ D +L+ TSEV+L Sbjct: 175 MLAAQ-KAREAGFKLMIPPVLVRPDIMSGTGFLGQHSDEIYYLPADDMYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ + PL++ + FR EAGS G+DTRG+LR HQF K E+ + ED+ Sbjct: 234 YHKDEIIDLSNGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVYCKPEDAEEM 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+LS +++L ++L YR + + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HQRLLSMEKDMLAAMELPYRTIDIAGGDLGSSAARKFDNEAWVPTQGTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+++RYRD N K + TLNG+ +A R L+AILEN+ ADGSV +P LRP++ Sbjct: 354 FQARRLSTRYRDENGK-TQTAATLNGT-LATTRWLVAILENHQQADGSVVVPEALRPFV- 410 Query: 419 NLAVIKKE 426 V+ + Sbjct: 411 GKDVLTPQ 418 >gi|57641075|ref|YP_183553.1| seryl-tRNA synthetase [Thermococcus kodakarensis KOD1] gi|67461627|sp|Q5JE75|SYS_PYRKO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|57159399|dbj|BAD85329.1| Seryl-tRNA synthetase [Thermococcus kodakarensis KOD1] Length = 455 Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 166/448 (37%), Positives = 249/448 (55%), Gaps = 27/448 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ IR+NPE + L KR + + IL LD+K R +KKI +R RN + Q Sbjct: 1 MLDIKLIRENPEIVKRDLIKRGETEKLKWIDEILELDKKWRENLKKINQLRKERNQLAVQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ G +D L ++ + +Q+ LEKE E+ + + +PN+ E VP+G Sbjct: 61 IGKRKKAGEP--IDDLLKRSNEIVKQIEELEKENEELKKKIDYYLWRLPNITHESVPVGE 118 Query: 118 SANENILIRSVGKKPSAI--------------------HLSREHFEIGEALGLMDFDRAT 157 S +N+ IR GK R H ++ E L D +RA Sbjct: 119 SDEDNVPIRFWGKAKVWEGFLETFKEQSLGKMEYEVLSWRPRLHVDMLELLRGADLERAA 178 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K+SGARF L L L+ AL +F +D E G+T V P +VR G F D Sbjct: 179 KVSGARFYYLLNELVILDLALIRFALD-KLIEKGFTPVIPPYMVRRFVEEGATTFDDFED 237 Query: 218 DMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LIPT+E L ++++EI++ K LPL + ++P FR EAG+AG+DT+G+ Sbjct: 238 VIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIF 297 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E +R E+S+ HER+++ AEEI + L++ YRVV++CTGDLG+ A K YD Sbjct: 298 RVHQFHKVEQFVYSRPEESWEWHERIIANAEEIFQALEIPYRVVNICTGDLGYVAAKKYD 357 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E W+AGQ +RE+ S S C ++Q+RR+N R+RD + +F HTLN + +A R ++AI Sbjct: 358 IEAWMAGQGKFREVVSASNCTDWQARRLNIRFRDKTHEKPRFVHTLNSTAIATSRAIVAI 417 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIK 424 LEN+ +G V +P L Y ++ Sbjct: 418 LENHQTEEGVVKLPKALWKYTGFKEILP 445 >gi|291458613|ref|ZP_06598003.1| serine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] gi|291419146|gb|EFE92865.1| serine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] Length = 436 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 134/429 (31%), Positives = 219/429 (51%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R++PE + ++K+ E + ++ LD + R + ++ +++RAR+N S Q Sbjct: 1 MLDIRFVREHPELVKENIQKKFQEEKLLLVDEVIRLDAEARKIQQEADELRARKNQVSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A G + + E + +L LE EE ++ + K + IPN+ VPIG Sbjct: 61 IGALMAAGKKEEAEKARAEVADFSGRLSELEAEEPKLQDEIHKRMMVIPNMIDPSVPIGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N+ G+ H +I ++ G +D D A +++G F L G +A L A Sbjct: 121 DDSFNVENERFGEPVVPDFEIPYHSDIMQSFGGIDLDAAGRVAGNGFYYLIGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T V P ++R + G + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYVIPPYMIRSRVVDGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EI+ + LPL ++ +P FR E G+ G + RG+ R HQF K E++ + ED+ Sbjct: 240 IGRFIDEILPADKLPLTLSSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCEPEDAM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ++ + + L++ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 LWYGKLWKNTVDFFRSLEIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R + K L TLN + VA R LIA LEN + ADGSV IP LRPY Sbjct: 360 GDAQARRLKIRVRGADGK-LHLPFTLNNTCVAPPRMLIAFLENLIRADGSVRIPAPLRPY 418 Query: 417 MNNLAVIKK 425 M + Sbjct: 419 MGGKESLVP 427 >gi|154149298|ref|YP_001405817.1| seryl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] gi|166201246|sp|A7HZX6|SYS_CAMHC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|153805307|gb|ABS52314.1| seryl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] Length = 417 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 181/421 (42%), Positives = 267/421 (63%), Gaps = 8/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M++++ I N + + L ++++ +L ++ + ++E+++ +N+ S + G Sbjct: 1 MINLKLIETNFDEFNKKLIAKNVKNDVLSTLLEAYDELKKDRLELENLQNLQNTKSKEFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + + LK E S K ++ + L K+ SC+PN+ ++VP G Sbjct: 61 EIMRQKGDAG--ELKKELSINKSKIQTQSEIVKAAEIKLDKIASCVPNIIDDDVPFGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+ I+ + + P +EHFE+GE LG +DF+R KLSG+RF+ + G A L A+ Sbjct: 119 NENVCIKKILQPPVFDFQPKEHFELGEKLGWLDFERGVKLSGSRFTAIKGMGAKLNLAII 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVSL 236 +MID + G+ V+ P LV+DE ++GTGQ+PKF DD++ + +LIPTSEV+ Sbjct: 179 NYMIDFN-QSRGFELVNLPFLVKDEILFGTGQLPKFKDDLYKVDNDELSLYLIPTSEVTA 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN Y+ EI+ LP++FT+ + FR EAGSAG+DTRGM+RQHQF K ELVSIT+ EDS Sbjct: 238 TNFYNGEILSEDELPVKFTSYSHCFRKEAGSAGKDTRGMIRQHQFEKVELVSITKPEDSD 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + M+SCA ++LK L L +R + LC+GDLGFSA KT DLEVWL GQN YREISS S C Sbjct: 298 KMFDEMVSCASDLLKSLGLAHRQMMLCSGDLGFSAAKTIDLEVWLPGQNTYREISSISNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RY+D N K+ + +TLNGS +AVGR L+AI+ENY DGS+ IP VL Y Sbjct: 358 RDFQARRAKIRYKDKNGKN-RLVNTLNGSSLAVGRTLVAIMENYQQKDGSIKIPKVLEEY 416 Query: 417 M 417 + Sbjct: 417 L 417 >gi|33240753|ref|NP_875695.1| seryl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|46577201|sp|Q7VAZ8|SYS_PROMA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|33238281|gb|AAQ00348.1| Seryl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 425 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 181/422 (42%), Positives = 263/422 (62%), Gaps = 8/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + IR+NP ++ L +R L+ + E+ + L + ++A+ N ++GQ Sbjct: 1 MLDQRKIRENPTLIEKGLARRGLKVNLAPLTEASERLKGLEQHRNSLQAKGNLIGKEVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G N V +L+++ + LK ++ +LE+EE + S++K I PN+P E P G Sbjct: 61 KIKSGISPNSEEVVSLRSKGNELKREINVLEEEEKALAKSIRKRILNYPNIPYSECPDGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+N+ IR+ G P +EH+EI E LGL+D +++ +++ +RF L H A LER+ Sbjct: 121 DENDNLQIRNWG-NPLKGEGYKEHWEIAEELGLLDTEKSVRIAKSRFVTLFNHGARLERS 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+D+HT GY+EV P+LV ++ G+GQ+PKFA++ F C+ D WL PT+EV L Sbjct: 180 LINFMLDIHT-SKGYSEVLPPVLVNTASLEGSGQLPKFAEESFKCSEDDLWLTPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ +E+I + LP+++ +P FR EAGS GRDTRG++R HQF K EL + S Sbjct: 239 TSLHRNEVIPFEKLPIKYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFVEPKKSK 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ + + AE IL++L+L YRVV LC+GDLGFSA TYDLEVWL G N YREISSCS C Sbjct: 299 EAHQIITADAEAILQKLELPYRVVELCSGDLGFSASCTYDLEVWLPGANSYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR R + HTLN SG+A+GR + AILEN +DG+V +P L PY Sbjct: 359 DDFQARRSFIR--TKKGNQTQLVHTLNASGLAIGRTMAAILENGQQSDGTVKLPKALVPY 416 Query: 417 MN 418 Sbjct: 417 FG 418 >gi|227505705|ref|ZP_03935754.1| seryl-tRNA synthetase [Corynebacterium striatum ATCC 6940] gi|227197673|gb|EEI77721.1| seryl-tRNA synthetase [Corynebacterium striatum ATCC 6940] Length = 418 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 148/428 (34%), Positives = 241/428 (56%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NP+ + + R +P + +L+ DE R I +++R+ + + +IG Sbjct: 1 MIDLKFLRENPDVVRASQVTRGEDPALVDQLLAADEARRSAILAADELRSEQKAFGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L ++ LKE++ E E E + + L I NV Sbjct: 61 QASPEERPA----LLEGSNELKEKVKKAEAELAEAEAKVNDLQFQISNVVEGAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ I++ VG P ++H E+GE+LGL+D R K+ GARF LTG A L+ + Sbjct: 115 DDFIVLEEVGAIPEFDFEPKDHLELGESLGLIDVKRGAKVGGARFYYLTGDGAFLQLGML 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 E G+ + P+LVR + M GTG + + +D+++ D +L+ TSEV+L Sbjct: 175 MLAAQ-KAREAGFQLMIPPVLVRPDIMAGTGFLGQHSDEIYYLPADDLYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI++ PL++T + FR EAGS G+DTRG+LR HQF K E+ + E++ Sbjct: 234 YHKDEILDLSDGPLKYTGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVFCKPEEAEEM 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ +L +++L ++L YR + + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HQMLLKMEKDMLAAMELPYRTIDIAGGDLGSSAARKFDNEAWVPTQGCYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD N K ++ TLNG+ +A R L+AILEN+ ADGSV +P LRP++ Sbjct: 354 FQARRLQTRYRDENGK-TQYAATLNGT-LATTRWLVAILENHQQADGSVVVPEALRPFV- 410 Query: 419 NLAVIKKE 426 V++ + Sbjct: 411 GKDVLRPK 418 >gi|238650802|ref|YP_002916657.1| seryl-tRNA synthetase [Rickettsia peacockii str. Rustic] gi|259511680|sp|C4K208|SYS_RICPU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238624900|gb|ACR47606.1| seryl-tRNA synthetase [Rickettsia peacockii str. Rustic] Length = 425 Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats. Identities = 207/423 (48%), Positives = 279/423 (65%), Gaps = 3/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L +R +EP S I LD + R + I++ + R S +G Sbjct: 1 MLNIKWIRENKELFDEKLSQRFIEPMSSKIAMLDREKRKITSLIQEFQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A + + L+ + + E+L LE + + + L PN+P EEVP G + Sbjct: 61 -MASKSGEEFEGLQRDVKHINEKLEALEHDLNNNNELNELLNM-FPNIPDEEVPYGMDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+R+ G + + L+++HFE+G L LMDF++ K+SG RF L G LA LERAL Sbjct: 119 MNKLVRTYG-ETNPNALNKQHFELGIKLNLMDFEQTAKISGTRFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT E + E+S P+LVRD AMY GQ+PKFA++ F TT+G LIPT+EVSL N+ Sbjct: 178 FMIDVHTKEWDFFEISPPVLVRDNAMYNAGQLPKFAEESFATTNGYRLIPTAEVSLVNMV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R+ P FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 238 ADTIIPREKLPIRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESTNEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E IL++L+L YRV+ LCTGD+GF+A KTYD+EVWL GQ YREI+SCS CG+FQ Sbjct: 298 YITNASETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNEDGSITIPDVLINYMGGL 417 Query: 421 AVI 423 I Sbjct: 418 QKI 420 >gi|157829048|ref|YP_001495290.1| seryl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933773|ref|YP_001650562.1| seryl-tRNA synthetase [Rickettsia rickettsii str. Iowa] gi|166223282|sp|A8GTQ7|SYS_RICRS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083581|sp|B0BV96|SYS_RICRO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157801529|gb|ABV76782.1| seryl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908860|gb|ABY73156.1| seryl-tRNA synthetase [Rickettsia rickettsii str. Iowa] Length = 425 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 206/423 (48%), Positives = 280/423 (66%), Gaps = 3/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L +R +EP S I LD + R + I++++ R S +G Sbjct: 1 MLNIKWIRENKELFDEKLSQRFIEPMSSKIAMLDGEKRKITSLIQELQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A + + L+ + + E+L LE + + + L PN+P EEVP G A+ Sbjct: 61 -MASKSGEEFEGLQRDVKHINEKLEALEHDLNNNNELNELLNM-FPNIPDEEVPYGMDAS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+R+ G + + L+++HFE+G L LMDF++ K+SG +F L G LA LERAL Sbjct: 119 MNKLVRTYG-ETNPNALNKQHFELGIKLNLMDFEQTAKISGTKFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT E + E+S P+LVRD AMY GQ+PKFA++ F TT+G LIPT+EVSL N+ Sbjct: 178 FMIDVHTKEWDFFEISPPVLVRDNAMYNAGQLPKFAEESFATTNGYRLIPTAEVSLVNMV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R+ FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 238 ADTIIPREKLPIRYVAYTQCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESTNEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E IL++L+L YRV+ LCTGD+GF+A KTYD+EVWL GQ YREI+SCS CG+FQ Sbjct: 298 YITNASETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNEDGSITIPDVLINYMGGL 417 Query: 421 AVI 423 I Sbjct: 418 QKI 420 >gi|72382646|ref|YP_292001.1| seryl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] gi|123620933|sp|Q46JN0|SYS_PROMT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|72002496|gb|AAZ58298.1| seryl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] Length = 426 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 183/430 (42%), Positives = 267/430 (62%), Gaps = 8/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R+NP + LK R ++ + + + L +K ++A+ NS ++GQ Sbjct: 1 MIDQRLLRENPNLISEGLKSRGMDVDLGPLQKFCKDLKELEEKRNSLQAQGNSIGKEVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I +G + + L+ + + +K+Q+ I+E+EE + + L + I C+PN+P + G Sbjct: 61 KIKQGLPHDSEEISNLRVKGNQIKKQVGIIEEEEKSISNKLNEQILCLPNLPEKNSLEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N +R G +P + + +EH+EI L L D +R++ ++ +RF L H A LER+ Sbjct: 121 NEKDNKELRRWG-EPISGNTLKEHWEIANQLNLWDSERSSVIAKSRFVTLFKHAAKLERS 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLH + GY EV P LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LINFMLDLHI-KKGYLEVLPPALVNTASLTGSGQLPKFAEESFRCADDDLWLTPTAEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII LPLR+ +P FR EAGS GRDTRG++R HQF K EL + E S Sbjct: 239 TSLHRGEIIPRDLLPLRYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFSTPERSE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E++ S AE +L+ L+L YRV+ LCTGDLGFSA KTYDLEVWL G N +REISSCS C Sbjct: 299 DALEQITSDAESVLQELELPYRVIQLCTGDLGFSAKKTYDLEVWLPGANTFREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR + R +D N+K HTLNGSG+A+GR + AILEN +DGS+ +P L PY Sbjct: 359 GDFQARRSSIRTKD-NNKKNILLHTLNGSGLAIGRTMAAILENGQQSDGSINLPKALIPY 417 Query: 417 MNNLAVIKKE 426 +K E Sbjct: 418 F-GSNKLKPE 426 >gi|226226949|ref|YP_002761055.1| seryl-tRNA synthetase [Gemmatimonas aurantiaca T-27] gi|259511670|sp|C1A8M5|SYS_GEMAT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226090140|dbj|BAH38585.1| seryl-tRNA synthetase [Gemmatimonas aurantiaca T-27] Length = 425 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 172/423 (40%), Positives = 245/423 (57%), Gaps = 8/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH----LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 M DI+ +R + L +++R L + SL++ R I ++E +ARRN + Sbjct: 1 MHDIRLLRDQLDVLREGMRRRGKLTELGDVLDRAESLEQARRTAITELEAQQARRNKVTQ 60 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 ++ Q G AL E + EQ+ LE+ +E ++++ ++ +PN+PL +VP G Sbjct: 61 EVAQRRKAG--EDATALIAEGRAIGEQITALEQRRNEADAAVQAMLYELPNIPLADVPEG 118 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++ G + H++ GEALG++D R K+SG+ F V A L R Sbjct: 119 DETANTVVRT-WGTPRTPDASIVPHWDKGEALGMLDLARGAKISGSGFIVYRNRGARLVR 177 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVS 235 AL M+D+HT EHGY E PL+V +M GTG PKF +D + T D +LIPT+EV Sbjct: 178 ALMNMMLDIHTEEHGYEETWVPLVVNRASMTGTGNFPKFEEDAYAITEDELFLIPTAEVP 237 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNLY EI++++ LP RF + FR EAG+AG+DTRG+LR H+F K ELV E S Sbjct: 238 VTNLYRDEILDAEELPKRFCAFSACFRREAGAAGKDTRGLLRVHEFDKVELVRYANPETS 297 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 E E + S AE ILKRL+L YRV+ L GD GFS+ KTYDLEV+ G + E+SSCS Sbjct: 298 LEELELLTSQAETILKRLELPYRVLLLAAGDTGFSSAKTYDLEVFAPGVGKWLEVSSCSL 357 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR N RYR + +F HTLNGS +A R + ++LE++ DGSV IP L+P Sbjct: 358 FTDFQARRANIRYRPAAGEKPRFVHTLNGSALAFSRIIASLLEHHQQPDGSVRIPEALQP 417 Query: 416 YMN 418 Y Sbjct: 418 YFG 420 >gi|94676816|ref|YP_588766.1| seryl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|166200602|sp|Q1LTE8|SYS_BAUCH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|94219966|gb|ABF14125.1| seryl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 430 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 176/431 (40%), Positives = 249/431 (57%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + + L ++ + + + + L K E ++ R S S + Sbjct: 1 MLDPYLLRHDIKIVAKKLASKNFLLAVDKVNQQEALRKQLQIKKEHLQFIRKSKSRIVNL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G + L E + + EQL + E + + + +PN+P ++VP G+ Sbjct: 61 AKANG--ENITILCQEINQINEQLKQTKSELSSLKQLINDYMLLLPNIPADDVPYGSDKK 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI I+ G+ ++H +G G +DF KL+G RF V+ G +A L RAL Q Sbjct: 119 DNIEIKRWGEPRKYNFPIKDHVNLGYITGNIDFTAGVKLAGTRFVVIRGQIARLYRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------DGRWLIPTS 232 FM+DLHT +HGY E P LV ++YGTG +PKF +D+F + LIPT+ Sbjct: 179 FMLDLHTQQHGYEEYYLPYLVNRTSLYGTGHLPKFYEDLFHIQSINKENISNIYTLIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV L NL +I + LPL+ T P FR+EAGS GRDT G++R HQF K E+V + Sbjct: 239 EVPLINLLRDKIFDENILPLKMTANTPCFRAEAGSYGRDTHGLIRMHQFDKVEMVQAIKP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E M AE++L+ L+LHYR V LCTGD GF++ KTYDLEVWL QN+Y E+SS Sbjct: 299 EHSMIALEEMTKHAEKVLQLLNLHYRKVLLCTGDTGFASSKTYDLEVWLPSQNIYCEVSS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS +FQ+RR+ +RYR+ K L+F HT+NGSG+A+GR LIAILENY ADG + +P Sbjct: 359 CSNTSDFQTRRVLARYRNKKDKQLRFLHTINGSGLAIGRTLIAILENYQLADGRIEVPKS 418 Query: 413 LRPYMNNLAVI 423 LR YM L ++ Sbjct: 419 LRSYMQGLTIL 429 >gi|314965938|gb|EFT10037.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA2] gi|315095165|gb|EFT67141.1| seryl-tRNA synthetase [Propionibacterium acnes HL060PA1] gi|327328793|gb|EGE70553.1| serine--tRNA ligase [Propionibacterium acnes HL103PA1] Length = 424 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 147/429 (34%), Positives = 235/429 (54%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R +P + +++ DE R I E++RA + +I Sbjct: 1 MIDPKLLRTDPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + T T+ ++ L+K E + + + NV + VP G Sbjct: 61 KASGDEKAE----LLSRTKTISGEVADLKKAADEADAKFTDIAKTLGNVVTDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ +++ Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS ++ + L + ++V+ + +GDLG SA + +D WL QN YREI+S S C Sbjct: 296 AWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV IP LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGREFIEP 422 >gi|257138294|ref|ZP_05586556.1| seryl-tRNA synthetase [Burkholderia thailandensis E264] Length = 475 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 179/399 (44%), Positives = 249/399 (62%), Gaps = 11/399 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R +L+ + R + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G A+ E + +++ + E+ + L +L+ +PNVP E VP+G Sbjct: 61 MKGRG--EDTSAVMAEVGGIGDEMKASAVKLDEIQARLSELMLEMPNVPHESVPVGRDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G ++H ++G LG +DF+ KLSGARF+VL G +A L RAL Q Sbjct: 119 ENVEVRRWGAPRQFDFDVKDHVDVGTPLG-LDFETGAKLSGARFTVLRGPIARLHRALAQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSE 233 FM+D HT +HGY+E P +V + +YGTGQ+PKFA+DMF ++LI TSE Sbjct: 178 FMLDTHTQQHGYSETYTPYIVNPDVLYGTGQLPKFAEDMFRVEKGGAENTVTQYLISTSE 237 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SLTN I+++ +LP++ T +P FRSEAGS GRDTRGM+RQHQF K E+V I E Sbjct: 238 ISLTNTVRDSIVDASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPE 297 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ + M+ AE IL+ L+L YRVV+LCTGD+GFSA KT+DLEVWL QN YREISSC Sbjct: 298 ASYAALDEMVGHAEAILQTLELPYRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 S +FQ+RRM +R+R+ K + HTLNGSG+AVGR Sbjct: 358 SNTESFQARRMQARFRNAQGK-PELVHTLNGSGLAVGRT 395 >gi|157964932|ref|YP_001499756.1| seryl-tRNA synthetase [Rickettsia massiliae MTU5] gi|166987316|sp|A8F2S3|SYS_RICM5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157844708|gb|ABV85209.1| Seryl-tRNA synthetase [Rickettsia massiliae MTU5] Length = 425 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 205/424 (48%), Positives = 280/424 (66%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N + D L +R +EP S I LD + R ++ I++ + R S +G Sbjct: 1 MLNIKWIRENQKLFDEKLSQRFIEPMSSKIAMLDREKRKIMSLIQEFQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A + + L+ + + E+L LE++ + + L PN+P EEVP G + Sbjct: 61 -MASKSGEEFEGLQRDVKHINEKLEALEQDLNNNNELNELLNM-FPNIPDEEVPYGMDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+R+ G + + L+++HFE+G L LMDF++ K+SG RF L G LA LERAL Sbjct: 119 MNKLVRTYG-ETNPNALNKQHFELGIKLNLMDFEQTAKISGTRFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT E + E+S P+LVRD AMY GQ+PKFA++ F TT+G LIPT+EV L N+ Sbjct: 178 FMIDVHTKELDFFEISPPVLVRDNAMYNAGQLPKFAEESFATTNGYRLIPTAEVPLVNIV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R+ P FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 238 ADTIIPREKLPMRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESKNEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E IL++L+L YRV+ LCTGD+GF+A KTYD+EVWL GQ YREI+SCS CG+FQ Sbjct: 298 YITNASETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNEDGSITIPDVLINYMGGL 417 Query: 421 AVIK 424 I Sbjct: 418 QKIT 421 >gi|157413737|ref|YP_001484603.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] gi|166987315|sp|A8G5Y6|SYS_PROM2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157388312|gb|ABV51017.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] Length = 425 Score = 367 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 172/422 (40%), Positives = 252/422 (59%), Gaps = 8/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + IR+NP ++ L R +I L K + + KI +++ S IGQ Sbjct: 1 MLDQKLIRENPTSVEENLSLRGKVYNISHIHELTVKKKDIDIKISSLQSESKKLSKLIGQ 60 Query: 61 AI---AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + + +LK + + + ++ LE+++ + + I +PN P + PIG Sbjct: 61 EISKSKNNDSPELISLKKKGNEYRIKISELEEKQRILDKEVDDEIYNLPNFPSKNAPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+NI +++ G P + H+EIGE+L + D ++TK+S +RF L G+ A LERA Sbjct: 121 DENDNIQVKTWG-NPLKDENLKSHWEIGESLNIFDSVKSTKISKSRFVTLIGNGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSL 236 L FM+D+HT ++GY E+ P LV E++ G+GQ+PKF+ + C+ D WL PT+EV L Sbjct: 180 LINFMLDMHT-KNGYLELMPPALVNSESLKGSGQLPKFSNESFKCSNDDLWLSPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T + +E+I+ K LP+++ +P FR EAGS G+DT+G++R HQF K EL S Sbjct: 239 TAFHRNELIDPKQLPIKYVAYSPCFRREAGSYGKDTKGLIRLHQFNKVELYWFCDPTKSL 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++ S AE I K+L+L YR+V +CTGDLGFS+ +T+DLEVWL YREISSCS C Sbjct: 299 EAHKKITSDAENIFKKLNLPYRIVDICTGDLGFSSSRTFDLEVWLPSSKCYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + R K + HTLNGSG+A+GR + AILEN DGSV IP L PY Sbjct: 359 LDFQARRSSIR--SKIDKKNIYLHTLNGSGLAIGRTMAAILENGQQTDGSVKIPDALVPY 416 Query: 417 MN 418 Sbjct: 417 FG 418 >gi|313817098|gb|EFS54812.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA1] gi|315100032|gb|EFT72008.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA2] Length = 424 Score = 367 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 145/429 (33%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R + + +++ DE R I E++RA + +I Sbjct: 1 MIDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + T T+ ++ L+K E + +L + N+ ++ VP G Sbjct: 61 KASGDEKAE----LLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ +++ Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS ++ + L + ++++ + +GDLG SA + +D WL QN YREI+S S C Sbjct: 296 AWHEKLLSFEKDFITALQIPFQMLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV IP LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGREFIEP 422 >gi|33861744|ref|NP_893305.1| seryl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|46577195|sp|Q7V0R7|SYS_PROMP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|33640112|emb|CAE19647.1| Seryl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 424 Score = 367 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 177/421 (42%), Positives = 251/421 (59%), Gaps = 7/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + IR+NP ++ L R I L + + + +I +++ S IGQ Sbjct: 1 MLDQKLIRENPTFVEDNLSLRGKVYDIARIRELSLERKEIDTEISSLQSESKKLSKIIGQ 60 Query: 61 AIAEGN--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 I N ++ LK++ + + ++ E+++ + L+ IS +PN+P ++ P+G + Sbjct: 61 EIRNSNINSKELNELKDKGNKYRIKVSEFEEQKRILDKQLQDEISKLPNLPSKDAPLGEN 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N NI I+ G P + H+EIGE L L D ++TK+S +RF LTG+ A LERAL Sbjct: 121 ENNNIQIKEWG-DPLTKDNLKAHWEIGENLNLFDSVKSTKISKSRFITLTGNGARLERAL 179 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSLT 237 FM+D+H S +GY E+ P LV E++ G+GQ+PKF+ + C D WL PT+EV LT Sbjct: 180 VNFMLDVH-SNNGYLELMPPALVNSESLQGSGQLPKFSNESFKCANDDLWLSPTAEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 + +EII+ K LPL++ +P FR EAGS GRDT+G++R HQF K EL S Sbjct: 239 AFHKNEIIDPKILPLKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYWFCHPNKSLE 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H+ + + AE ILK+L+L YR V +CTGDLGFS+ +T+DLEVWL YREISSCS C Sbjct: 299 AHKEITADAESILKKLNLPYRSVDICTGDLGFSSSRTFDLEVWLPSSQCYREISSCSNCL 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR + R K + HTLNGSG+A+GR + AILEN DGSV IP L PY Sbjct: 359 DFQARRSSIR--TKIDKKTSYIHTLNGSGLAIGRTMAAILENGQQLDGSVKIPDALVPYF 416 Query: 418 N 418 Sbjct: 417 G 417 >gi|291522902|emb|CBK81195.1| seryl-tRNA synthetase [Coprococcus catus GD/7] Length = 448 Score = 367 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 148/433 (34%), Positives = 239/433 (55%), Gaps = 13/433 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IR+NP+ + LK + ++ + IL LDE+ R L+++ E ++A +N S QI Sbjct: 21 MLDIKLIRENPDKIKAGLKAKEVDCDELIDRILELDEQRRTLLQQTEALKAEQNKVSKQI 80 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G A+ E +K ++ L+ + +V + ++ + C+PN+P +++ G Sbjct: 81 PALKKAG--EDTTAIFKEMGEIKGKISALDGQLRDVVNEYQQDLYCLPNMPDDDLLPGGK 138 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N +R G+ + H ++ LGL+D++R KL+G F + G A LE AL Sbjct: 139 ENN-EPLRYFGEPKKFDFEPKNHVDLCTNLGLIDYERGVKLAGNGFWIYKGMGARLEWAL 197 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPTS 232 + ID H ++ GY + P ++ + GQ PKFAD+++ + +++PT+ Sbjct: 198 LNYFIDTHLAD-GYEMIMPPYMLEYQCGLTAGQFPKFADEVYKIANPTDEGRIHYMLPTA 256 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E +L ++Y EI+ LP +F + P FR EAGS D RGM+R HQF K E+ T Sbjct: 257 EAALASVYRDEILTEADLPKKFFSYTPCFRREAGSYRADERGMVRGHQFNKVEMFQYTLP 316 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E +++ AE ++K L H+R V L GD S +TYD+E+ + N Y+E+SS Sbjct: 317 EKSDEAFEELVTKAENLVKGLGFHFRTVKLAAGDCSASMARTYDIEISIPSMNGYKEVSS 376 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S ++Q+RR N R R + ++++F HTLNGSG+A R L A++E DGS+ +P V Sbjct: 377 VSNARDYQARRGNMRVRRAD-RAIQFMHTLNGSGLATSRVLPALVEQNQLKDGSIVVPEV 435 Query: 413 LRPYMNNLAVIKK 425 LR Y+ + VI K Sbjct: 436 LRKYLGGIEVISK 448 >gi|282854499|ref|ZP_06263835.1| serine--tRNA ligase [Propionibacterium acnes J139] gi|282582360|gb|EFB87741.1| serine--tRNA ligase [Propionibacterium acnes J139] gi|314921979|gb|EFS85810.1| seryl-tRNA synthetase [Propionibacterium acnes HL001PA1] gi|314980741|gb|EFT24835.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA3] gi|315090940|gb|EFT62916.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA4] Length = 424 Score = 367 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 147/429 (34%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R +P + +++ DE R I E++RA + +I Sbjct: 1 MIDPKLLRTDPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + T T+ ++ L+K E + + + NV ++ VP G Sbjct: 61 KASGDEKAE----LLSRTKTISGEVADLKKAADEADAKFTDIAKTLGNVVIDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ +++ Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS ++ + L + ++V+ + +GDLG SA + +D WL QN YREI+S S C Sbjct: 296 AWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV IP LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGREFIEP 422 >gi|254525907|ref|ZP_05137959.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] gi|221537331|gb|EEE39784.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] Length = 425 Score = 367 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 172/422 (40%), Positives = 253/422 (59%), Gaps = 8/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + IR+NP ++ L R +I L K + + KI +++ S IGQ Sbjct: 1 MLDQKLIRENPTSVEENLSLRGKVYNISHIHELTVKKKDIDIKISSLQSESKKLSKLIGQ 60 Query: 61 AI---AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + + +LK + + + ++ LE+++ + + I +PN P + PIG Sbjct: 61 EISKSKNNDSPELISLKKKGNEYRIKISELEEKQRILEKEVADEIYNLPNSPSKNAPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N+N+ +++ G P + H+EIGE+L + D ++TK+S +RF L G+ A LERA Sbjct: 121 DENDNVQVKTWG-NPLTDDNLKSHWEIGESLNIFDSVKSTKISKSRFVTLIGNGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSL 236 L FM+D+HT ++GY E+ P LV E++ G+GQ+PKF+ + C+ D WL PT+EV L Sbjct: 180 LINFMLDMHT-KNGYLELMPPALVNSESLKGSGQLPKFSNESFKCSNDDLWLSPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T + +E+I+ K LP+++ +P FR EAGS G+DT+G++R HQF K EL S Sbjct: 239 TAFHRNELIDPKQLPIKYVAYSPCFRREAGSYGKDTKGLIRLHQFNKVELYWFCDPTKSL 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++ S AE ILK+L+L YR+V +CTGDLGFS+ +T+DLEVWL YREISSCS C Sbjct: 299 EAHKKITSDAENILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSSKCYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + R K + HTLNGSG+A+GR + AILEN DGSV IP L PY Sbjct: 359 LDFQARRSSIR--SKIDKKNIYLHTLNGSGLAIGRTMAAILENGQQTDGSVKIPDALVPY 416 Query: 417 MN 418 Sbjct: 417 FG 418 >gi|313826917|gb|EFS64631.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA1] Length = 424 Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats. Identities = 147/429 (34%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R + + +++ DE R I E++RA + +I Sbjct: 1 MIDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + T T+ ++ L+K E + +L + N+ ++ VP G Sbjct: 61 KASGDEKAE----LLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ +++ Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS E+ + L + ++V+ + +GDLG SA + +D WL QN YREI+S S C Sbjct: 296 AWHEKLLSFEEDFITALQIPFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV IP LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGREFIEP 422 >gi|319441450|ref|ZP_07990606.1| seryl-tRNA synthetase [Corynebacterium variabile DSM 44702] Length = 424 Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 240/428 (56%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NP+ + + + R +P + +L D++ R LI + R + S +G Sbjct: 1 MIDLKFLRENPDVVRDSQRTRGEDPSLVDQLLEADQRRRDLIAAADTARGEAKAYSRSMG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + + LK L E + +E +E + + L I N+ Sbjct: 61 KQMKDATPEEREQLKARGKELAEAVKKIEADEKDAEQDVHDLQFKISNIVTGAP--AGGE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +++ +G ++H E+GE+LGL+D +R K+SGARF LTG A L + Sbjct: 119 DDFVVLEHIGTPREFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGDGALL-QLAM 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 + EHG+ + P+LVR E M GTG + AD+++ D +L+ TSEV+L Sbjct: 178 LQLAARKAVEHGFQLMIPPVLVRPEIMAGTGFLGAHADEIYHLDEDDLFLVGTSEVALAG 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EII+ P+++ + FR EAGS G+DTRG+LR HQF K E+ + ED+ Sbjct: 238 YHSDEIIDLSEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYAKPEDAEEI 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+++L+ +++L +++ YRV+ + GDLG SA + +D E W+ QN YRE++S S C Sbjct: 298 HQQLLAMEKDMLAAVEVPYRVIDVAGGDLGSSASRKFDTEAWVPTQNTYRELTSTSNCTT 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD N K+ + TLNG+ +A R L+AILEN ADGSV +P LRP++ Sbjct: 358 FQARRLKTRYRDENGKA-QTAATLNGT-LATTRWLVAILENNQQADGSVVVPEALRPFI- 414 Query: 419 NLAVIKKE 426 V+ + Sbjct: 415 GKDVLTPK 422 >gi|325108605|ref|YP_004269673.1| seryl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] gi|324968873|gb|ADY59651.1| seryl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] Length = 428 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 142/433 (32%), Positives = 238/433 (54%), Gaps = 13/433 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+Q++ N + + + R ++ +L L ++ R LI + + +R + S +I + Sbjct: 1 MLDLQFLCDNLDDVAANCENRGIKVDLSALLKLRDRRRELIAQGDQLRTEQKETSGKIPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A AE L L+EQ+ +E+E+ +V L+ + S +PN+ + P+G + + Sbjct: 61 ASAEEKP----QLIARGKELREQVNQIEQEQKQVEEELRGIQSQVPNMTHPDAPVGKTDD 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +++ +R G KP +R+H E+ E+ L+D + +K++G F L LE AL Q Sbjct: 117 DSVTVREWGDKPQFEFKARDHVELMESNDLLDLESGSKVTGHGFYYLKNEAVLLELALVQ 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 F ++ + G+T +S P L R+E + G G P+ + L+ T+E++L Sbjct: 177 FAVE-KLVKEGFTIISTPDLARNEVLEGVGFNPRGDEAQIYSVENTDLSLVATAEITLGG 235 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SF 296 + EI++ +LP++ ++ FR+EAG+ GR TRG+ R HQF K E+ T + S Sbjct: 236 MLKDEILDEANLPVKTAGISHCFRTEAGAHGRATRGIYRVHQFTKVEIFGFTTPDTAVSD 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSC 353 H+ +L EEI + L + YRV+ + TGD+G A + +DLE W+ G+ Y E++SC Sbjct: 296 EYHQMILRIEEEIFQGLGIPYRVLDIATGDMGGPAYRKFDLEAWMPGRGEAGEYGEVTSC 355 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C ++QSRR+N R R K +F HTLNG+ VAV R +IA++ENY ADGS+ +P L Sbjct: 356 SNCTDYQSRRLNIRCRGKEKKGTQFVHTLNGTAVAVSRAMIALVENYQQADGSIRVPEAL 415 Query: 414 RPYMNNLAVIKKE 426 + ++ VI Sbjct: 416 QKWV-GKEVIGPR 427 >gi|300727856|ref|ZP_07061236.1| serine--tRNA ligase [Prevotella bryantii B14] gi|299774904|gb|EFI71516.1| serine--tRNA ligase [Prevotella bryantii B14] Length = 430 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 146/422 (34%), Positives = 240/422 (56%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I +N E + L+K+H E E +L D+ R +K+++ +A++N + Q Sbjct: 1 MLTLKLISENTEKVIKGLEKKHFEGAREAIEKVLEFDKARREAQQKLDNNKAQQNQLAKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG +A+K + + LK L+ E + ++ + + IPNVP ++VP G Sbjct: 61 IGGLMKEGKKDEANAIKEQVAALKVTDAELKAEMDKAEKNMTETLLSIPNVPNDDVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++++ G KP + H+++ + L+DFD K++GA F + G +A +RA Sbjct: 121 DAADNVVVKEGGLKPELPEDALCHWDLLKKYNLVDFDLGVKITGAGFPIYLGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY EV P +V + + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPYVVNEASGYGTGQLPDKEGQMYHANLDNLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ I++ K LP++ + FR EAGS G+D RG+ R HQF K E+V + E S+ Sbjct: 240 TNIFRDVILDEKDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRLDTPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + M+ E +LK+L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 ESLKEMMDHVEGLLKKLELPYHILRLCGGDMSFTSAICYDFEVWSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ R+R +K + HTLNGS +A+ R + +I+EN +G + +P VL PY Sbjct: 360 ESYQANRLKCRFRRSETKKTELVHTLNGSALALPRIVASIIENNQTPEG-IRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|76798465|ref|ZP_00780702.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|76799387|ref|ZP_00781541.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|76585255|gb|EAO61859.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|76586166|gb|EAO62687.1| seryl-tRNA synthetase [Streptococcus agalactiae 18RS21] Length = 381 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 189/383 (49%), Positives = 259/383 (67%), Gaps = 4/383 (1%) Query: 44 IEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 E+ +A+RN SA I QA N D TL + ++ E +V ++L+ +++ Sbjct: 1 AEEAKAQRNVASAAIAQAKR--NKENADEQIAAMQTLSADIKAIDAELADVDANLQSMVT 58 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 +PN P ++VP+G +EN+ +R G ++ H+++GE+LG++D++R K++G+R Sbjct: 59 VLPNTPADDVPLGADEDENVEVRRWGTPREFDFETKAHWDLGESLGILDWERGAKVTGSR 118 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 F G A LERA+ FM+D H E GYTEV P +V ++M+GTGQ PKF +D F Sbjct: 119 FLFYKGLGARLERAIYSFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELA 177 Query: 224 DGRWL-IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 D ++ IPT+EV LTN Y EII+ K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF Sbjct: 178 DSPFVLIPTAEVPLTNYYRDEIIDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFH 237 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 K E+V + E+S+ E E+M + AE IL++L+L YRV++LCTGD+GFSA KTYDLEVW+ Sbjct: 238 KVEMVKFAKPEESYQELEKMTANAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIP 297 Query: 343 GQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 QN YREISSCS +FQ+RR RYRD ++ HTLNGSG+AVGR + AILENY N Sbjct: 298 AQNTYREISSCSNTEDFQARRAQIRYRDEVDGKVRLLHTLNGSGLAVGRTVAAILENYQN 357 Query: 403 ADGSVTIPTVLRPYMNNLAVIKK 425 DGSVTIP VLRPYM N+ +IK Sbjct: 358 EDGSVTIPEVLRPYMGNIDIIKP 380 >gi|240104000|ref|YP_002960309.1| seryl-tRNA synthetase [Thermococcus gammatolerans EJ3] gi|259516204|sp|C5A226|SYS_THEGJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|239911554|gb|ACS34445.1| Seryl-tRNA synthetase (serS) [Thermococcus gammatolerans EJ3] Length = 455 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 161/448 (35%), Positives = 245/448 (54%), Gaps = 27/448 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ IR+ PE + L KR + + IL LD K R +KKI +R RN + Q Sbjct: 1 MLDIKLIREKPELVKKDLIKRGETEKVKWIDEILELDRKWRENLKKINQLRKERNQLAVQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ G ++ L ++ + +Q+ LEKE + + + +PN+ E VP+G Sbjct: 61 IGKRKKAGEP--IEDLLARSNEIVKQIEELEKEVEALKKKIDYYLWRLPNITHESVPVGK 118 Query: 118 SANENILIRSVGKKPSAI--------------------HLSREHFEIGEALGLMDFDRAT 157 EN+ IR GK R H ++ E L D +RA Sbjct: 119 DDTENVPIRFWGKAKVWEGFLESFKEQSLGKMDYEVLSWRPRLHVDMLELLRGADLERAA 178 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K+SG+RF L L L+ AL +F +D E G+T V P +VR G F D Sbjct: 179 KVSGSRFYYLLNELVILDLALIRFALDR-LIEKGFTPVIPPYMVRRFVEEGATTFEDFED 237 Query: 218 DMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LIPT+E L ++++EI++ K LPL + ++P FR EAG+AG+DT+G+ Sbjct: 238 VIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIF 297 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E +R E+S+ HE++++ AEE+ + L++ YRVV++CTGDLG+ A K YD Sbjct: 298 RVHQFHKVEQFVYSRPEESWEWHEKIIANAEELFQELEIPYRVVNICTGDLGYVAAKKYD 357 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E W+AGQ +RE+ S S C ++Q+RR+N R+RD + KF HTLN + +A R ++AI Sbjct: 358 IEAWMAGQGKFREVVSASNCTDWQARRLNIRFRDKTHEKPKFVHTLNSTAIATSRAIVAI 417 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIK 424 LEN+ +G V +P L Y ++ Sbjct: 418 LENHQTEEGVVKLPKALWKYTGFKEILP 445 >gi|323342248|ref|ZP_08082480.1| serine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463360|gb|EFY08554.1| serine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 428 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 143/429 (33%), Positives = 224/429 (52%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI R NPE + LKK+ E + + I++LD + R + + +++R +RN+ S Q Sbjct: 1 MLDINLFRTNPELIKENLKKKFQEHKADMVDEIIALDIEYRGIKTRADELRGQRNALSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + + + +A+K + +L +E+ E + +K L+ IPN+ ++VPIG Sbjct: 61 IGQLMGQKKIDEANAVKEQVQAFALELKDIEEREEPLFDKIKALMMEIPNIIADDVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ +VG H +I E+ G +D D A K++GA F L +A L A Sbjct: 121 DDSENVERYTVGDIVDKGFDVPYHTDIMESFGGIDLDAARKVAGAGFYYLQKDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + GY V P ++ + + G + + M+ + +LI TSE S+ Sbjct: 181 VTSYARDFMI-DRGYDYVIPPFMIHRDVVSGVMSFEEMENMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 Y II+ ++LP + T+ +P FR E G+ G + RG+ R HQF K E+V + +DS Sbjct: 240 IGKYIDTIIDGETLPHKLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVVVCHPDDSA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + + + LD+ RV+ C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 ALFEELYHNSVDFFRTLDIPVRVLECCSGDLADLKNKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + Q+RR+ R P + + HTLN + VA R LIA LEN L ADGSV IP L+PY Sbjct: 360 TDAQARRLKIRIDTPEGRV--YAHTLNNTVVAPPRMLIAFLENNLQADGSVLIPEALQPY 417 Query: 417 MNNLAVIKK 425 M I+ Sbjct: 418 MGFKKKIEP 426 >gi|269124398|ref|YP_003297768.1| seryl-tRNA synthetase [Thermomonospora curvata DSM 43183] gi|268309356|gb|ACY95730.1| seryl-tRNA synthetase [Thermomonospora curvata DSM 43183] Length = 418 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 155/427 (36%), Positives = 241/427 (56%), Gaps = 13/427 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++PE L + + R + + ++ LDE+ R + + E +RA + S + Sbjct: 1 MIDLRALREDPERLRASQRARGEDEAVVDRLIDLDERRRAALSQFEKLRAEQKSFGKSVS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A AL L Q+ E E + L +++ +PN+ E P G Sbjct: 61 KAKG----EERQALLERAKELARQVKEAEAEADRLQEELNEVLRGVPNIIEEGAPPGGEQ 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L VG+ P+ R+H E+GE LG +D +R K+SGARF LTG A L+ AL Sbjct: 117 DFVVLEH-VGEPPTFDFEPRDHLELGELLGAIDTERGAKVSGARFYYLTGVGARLQLALL 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 ++ E G+ + P+LV+ EAM GTG + A +++ D +L+ TSEV L Sbjct: 176 NLAME-QAIEAGFFPMYPPVLVKPEAMEGTGFLGAHASEVYRLEADDLYLVGTSEVPLAA 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +EII+ LP R+ + FR EAGS G+DTRG++R HQF K E+ S EDS E Sbjct: 235 YHMNEIID--DLPRRYVAWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFSYCTLEDSHAE 292 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L +++L +++L YRV+ + GDLG SA + YD E WL QN YRE++S S C + Sbjct: 293 HLRLLEWEKQMLAKVELPYRVIDVAAGDLGASAARKYDCEAWLPSQNTYREVTSTSNCTD 352 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ R+R + K + TLNG+ +A R ++AILEN+ ADGSV +P L+ ++ Sbjct: 353 FQARRLAVRHRGEDGK-PRPVATLNGT-LATTRWIVAILENHQQADGSVRVPKALQRHL- 409 Query: 419 NLAVIKK 425 L V++ Sbjct: 410 GLEVLEP 416 >gi|313794154|gb|EFS42174.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA1] gi|313803276|gb|EFS44472.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA2] gi|313839192|gb|EFS76906.1| seryl-tRNA synthetase [Propionibacterium acnes HL086PA1] gi|314964050|gb|EFT08150.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA1] gi|315078297|gb|EFT50336.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA2] gi|327334394|gb|EGE76105.1| serine--tRNA ligase [Propionibacterium acnes HL097PA1] gi|327457587|gb|EGF04242.1| seryl-tRNA synthetase [Propionibacterium acnes HL092PA1] Length = 424 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 146/429 (34%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R +P + +++ DE R I E++RA + +I Sbjct: 1 MIDPKLLRTDPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + T T+ ++ L+K E + +L + N+ ++ VP G Sbjct: 61 KASGDEKAE----LLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+ + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFIPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ +++ Sbjct: 236 AAFHSDEILDDVELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS ++ + L + ++V+ + +GDLG SA + +D WL QN YREI+S S C Sbjct: 296 AWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV IP LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGREFIEP 422 >gi|330443906|ref|YP_004376892.1| seryl-tRNA synthetase [Chlamydophila pecorum E58] gi|328807016|gb|AEB41189.1| seryl-tRNA synthetase [Chlamydophila pecorum E58] Length = 424 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 165/428 (38%), Positives = 238/428 (55%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+ IR+ PE ++ L+++ + IL+LD+ R L + E ++ARR + S +I + Sbjct: 1 MLDIKIIRKEPEKSELRLRRKDSNISLQPILTLDKTVRELKTQAEALQARRRALSEEIRK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G + E S + Q LE+ E + L +S +PN P E+VP + Sbjct: 61 LKAQGEDAQAH--IQEASKVASQQKDLEERLQENEALLHDEMSRLPNYPAEDVPDAPDKS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +I+S G + H E+ +AL ++DF K +G+ + LE AL Sbjct: 119 GNRVIKSFGTPREFSFPPKNHLELNKALDILDFKSPAKTTGSGWPAYKNFGVLLEWALLT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 +++ HG+ PLLV+ E +YG+GQIPKF + +LIPT+EV L Sbjct: 179 YLLQKQ-RAHGFELWLPPLLVKKEILYGSGQIPKFDGQYYRVEDGDHHLYLIPTAEVVLN 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +S E++ K LPL + P FR EAG+AG RG++R HQF K E+ + T + + Sbjct: 238 GFHSQELLNEKDLPLYYAACTPCFRREAGAAGSQERGLVRVHQFHKVEMFAFTTPDQEDS 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + +ML EEIL L+L YR+ L TGD+ F+A KT D EVWL GQN + E+SS S C Sbjct: 298 AYTKMLDIVEEILIELELPYRLSLLSTGDMSFTASKTIDAEVWLPGQNAFYEVSSISKCS 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQSRR +RY+D K + F HTLNGSG+A R L+AILEN DGSV IP VLR Y+ Sbjct: 358 DFQSRRSGTRYKDAQGK-MHFVHTLNGSGLATPRLLVAILENNQQEDGSVVIPKVLRAYL 416 Query: 418 NNLAVIKK 425 N ++ Sbjct: 417 GNQEKLEP 424 >gi|50843654|ref|YP_056881.1| seryl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|289425915|ref|ZP_06427667.1| serine--tRNA ligase [Propionibacterium acnes SK187] gi|289427861|ref|ZP_06429565.1| serine--tRNA ligase [Propionibacterium acnes J165] gi|295131740|ref|YP_003582403.1| serine--tRNA ligase [Propionibacterium acnes SK137] gi|81826360|sp|Q6A5P0|SYS_PROAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|50841256|gb|AAT83923.1| seryl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|289153691|gb|EFD02400.1| serine--tRNA ligase [Propionibacterium acnes SK187] gi|289158744|gb|EFD06944.1| serine--tRNA ligase [Propionibacterium acnes J165] gi|291377175|gb|ADE01030.1| serine--tRNA ligase [Propionibacterium acnes SK137] gi|313765178|gb|EFS36542.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA1] gi|313771554|gb|EFS37520.1| seryl-tRNA synthetase [Propionibacterium acnes HL074PA1] gi|313808611|gb|EFS47071.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA2] gi|313811953|gb|EFS49667.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA1] gi|313819045|gb|EFS56759.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA2] gi|313821678|gb|EFS59392.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA1] gi|313823814|gb|EFS61528.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA2] gi|313832385|gb|EFS70099.1| seryl-tRNA synthetase [Propionibacterium acnes HL007PA1] gi|313834182|gb|EFS71896.1| seryl-tRNA synthetase [Propionibacterium acnes HL056PA1] gi|314916818|gb|EFS80649.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA4] gi|314918995|gb|EFS82826.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA1] gi|314921174|gb|EFS85005.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA3] gi|314926153|gb|EFS89984.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA3] gi|314932479|gb|EFS96310.1| seryl-tRNA synthetase [Propionibacterium acnes HL067PA1] gi|314956294|gb|EFT00666.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA1] gi|314958685|gb|EFT02787.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA1] gi|314960992|gb|EFT05093.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA2] gi|314968817|gb|EFT12915.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA1] gi|314975052|gb|EFT19147.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA1] gi|314977463|gb|EFT21558.1| seryl-tRNA synthetase [Propionibacterium acnes HL045PA1] gi|314979051|gb|EFT23145.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA2] gi|314985840|gb|EFT29932.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA1] gi|314985971|gb|EFT30063.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA2] gi|314989277|gb|EFT33368.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA3] gi|315081396|gb|EFT53372.1| seryl-tRNA synthetase [Propionibacterium acnes HL078PA1] gi|315084964|gb|EFT56940.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA2] gi|315087495|gb|EFT59471.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA3] gi|315089597|gb|EFT61573.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA1] gi|315096907|gb|EFT68883.1| seryl-tRNA synthetase [Propionibacterium acnes HL038PA1] gi|315102807|gb|EFT74783.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA1] gi|315107363|gb|EFT79339.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA1] gi|327332982|gb|EGE74714.1| serine--tRNA ligase [Propionibacterium acnes HL096PA2] gi|327333974|gb|EGE75689.1| serine--tRNA ligase [Propionibacterium acnes HL096PA3] gi|327448690|gb|EGE95344.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA1] gi|327449117|gb|EGE95771.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA2] gi|327450347|gb|EGE97001.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA2] gi|327455505|gb|EGF02160.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA3] gi|327456161|gb|EGF02816.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA2] gi|328756832|gb|EGF70448.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA1] gi|328759113|gb|EGF72729.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA2] gi|328762221|gb|EGF75717.1| serine--tRNA ligase [Propionibacterium acnes HL099PA1] gi|332676603|gb|AEE73419.1| serine-tRNA ligase [Propionibacterium acnes 266] Length = 424 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 146/429 (34%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R + + +++ DE R I E++RA + +I Sbjct: 1 MIDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + T T+ ++ L+K E + +L + N+ ++ VP G Sbjct: 61 KASGDEKAE----LLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ +++ Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS ++ + L + ++V+ + +GDLG SA + +D WL QN YREI+S S C Sbjct: 296 AWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV IP LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGREFIEP 422 >gi|309805100|ref|ZP_07699153.1| serine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] gi|308165554|gb|EFO67784.1| serine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] Length = 406 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 175/404 (43%), Positives = 247/404 (61%), Gaps = 12/404 (2%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 +++D K R ++ K E ++ +RN SAQI QA N D E + +++ L+ E Sbjct: 2 VAIDVKRREVLTKTETLKNKRNEVSAQIAQAKK--NKENADDAIKEMREVGQEIKALDVE 59 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 E+ K ++ +PN P + PIG + N +R + + H+++G L + Sbjct: 60 VSELTEKQKYILLRLPNFPDDSDPIGPDDSYNEEVRKWNEPTKFTFEPKAHWDLGTDLNI 119 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 +D+D A K+SGARF G A LERA+ F +D + + GYTEV P LV ++M GTG Sbjct: 120 LDWDAAAKVSGARFVYYKGAGALLERAVFNFFLDENV-KAGYTEVIPPYLVNYDSMQGTG 178 Query: 211 QIPKFADDMFCT--------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFR 262 Q PKF +D++ LIPT+EV L N + +I++ K LP+ T ++P+FR Sbjct: 179 QFPKFTEDVYTIVDNDDPDKPRELTLIPTAEVPLVNYFRDKILDIKQLPINVTAMSPAFR 238 Query: 263 SEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSL 322 SEAGSAGRDTRG++R H+F K E+V I E+ S+ E +++ AE +L++L+L Y VV+L Sbjct: 239 SEAGSAGRDTRGLIRMHEFRKVEMVKICDEDSSWQELDKLTKNAEHLLQKLELPYHVVAL 298 Query: 323 CTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTL 382 TGD F++ KTYDLEVW+ QN YREISSCS C +FQ+RR RYRD K L HTL Sbjct: 299 STGDASFTSAKTYDLEVWMPAQNQYREISSCSNCTDFQARRSLIRYRDEAGK-LHLAHTL 357 Query: 383 NGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 NGSG+AVGR + AILENY N DG+V +P L PYM+ + VIK E Sbjct: 358 NGSGLAVGRTVAAILENYQNEDGTVNVPEALVPYMHGMTVIKPE 401 >gi|302207077|gb|ADL11419.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis C231] Length = 419 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 145/427 (33%), Positives = 242/427 (56%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NP+ + + + R +P+ + +L+ DE R I+ +++R+ + +IG Sbjct: 1 MIDLKFLRENPDIVRESQRIRGEDPELVDKLLAADEARRAAIQVADELRSEHKAFGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA AL ++ LK ++ E+ + + + +L NV + Sbjct: 61 QA----APEERTALLEGSNELKAKVKEAEEAQSAAEAKVDELQMLFSNVVTDAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ I++ VG+ + ++H E+GE+LGL+D R TK+ GARF LTG A L+ + Sbjct: 115 DDFIVLEHVGEPRTFDFEPKDHLELGESLGLIDTKRGTKVGGARFYYLTGDGAFLQLGML 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 E+G+ + P+LVR E M GTG + +D+++ D +L+ TSEV+L Sbjct: 175 NLAAQ-KARENGFQLMIPPVLVRPEIMQGTGFLGAHSDEIYYLERDDLYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ P+++ + FR EAGS G+DTRG+LR HQF K E+ + ED+ + Sbjct: 234 YHKDEIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVFCKPEDAVEQ 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ +L ++L +++ YRV+ + GDLG SA + +D E W+ QN YRE++S S C Sbjct: 294 HQALLKMERDMLAAVEVPYRVIDVAGGDLGSSAARKFDTEAWVPTQNTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD K+ + TLNG+ +A R L+AILEN ADGSV +P LRP++ Sbjct: 354 FQARRLQTRYRDETGKA-QTCATLNGT-LATTRWLVAILENNQQADGSVIVPEALRPFV- 410 Query: 419 NLAVIKK 425 V++ Sbjct: 411 GKDVLEP 417 >gi|332884348|gb|EGK04616.1| seryl-tRNA synthetase [Dysgonomonas mossii DSM 22836] Length = 423 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 153/426 (35%), Positives = 243/426 (57%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML ++ I +NPE + L K+H + + E +L +D+ + ++ + N+ S I Sbjct: 1 MLTLKTISENPELVIKKLAKKHFDAKEIIEKVLEIDQTRKKTQTSLDACLSESNNLSKHI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 GQ + EGN + + KN + +K Q +LE+ + L++L+ IPN+P +EVP G Sbjct: 61 GQLMKEGNKAEAEIAKNRVAEIKGQSKVLEETLRQAEQDLQELLVLIPNLPSDEVPEGRV 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N++ ++ G P + H+++ + L+DF+ K++GA F V G A L+RAL Sbjct: 121 AEDNVVEKTGGIIPELGEDALPHWDLAKKYDLIDFELGVKITGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 + +D E GY EV P +V + YGTGQ+P M+ T D +LIPT+EV +T Sbjct: 181 INYFLD-KARESGYLEVQPPYVVNAASGYGTGQLPDKEGQMYHATLDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y I+E K LP+ T + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 NIYRDVILEEKDLPIMNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M++ + ++ L+L +R++ LC GD+ F++ T+D EV+ A Q + E+SS S Sbjct: 300 SLKEMVAHVQSLVDELELPWRILRLCGGDMSFTSALTFDFEVFSAAQKRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+ R+ RYRD + K ++ HTLNGS +A+ R + A+LEN D + IP VL PY Sbjct: 360 SYQANRLKCRYRDAD-KKIQLAHTLNGSALALPRIVAALLENNQT-DAGIRIPKVLVPYT 417 Query: 418 NNLAVI 423 I Sbjct: 418 -GFEFI 422 >gi|282859535|ref|ZP_06268640.1| serine--tRNA ligase [Prevotella bivia JCVIHMP010] gi|282587763|gb|EFB92963.1| serine--tRNA ligase [Prevotella bivia JCVIHMP010] Length = 429 Score = 366 bits (940), Expect = 4e-99, Method: Composition-based stats. Identities = 153/431 (35%), Positives = 247/431 (57%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H E +LS D + R +K+++ + ++N S Q Sbjct: 1 MLTLKLISEETERVVKGLEKKHFSGAREAVEKVLSFDLQRREAQQKLDNNKQQQNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + + +KN+ + LK L++E + +++ IPN+ ++VP G Sbjct: 61 IGGLMKEGKKAEAEDIKNKVAELKALDKSLQEEMDRAQQDMTEVLLTIPNIANDDVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A+ NI+I+ G+KP+ + H++I + L+DF+ K++GA F + G +A L+RA Sbjct: 121 DASSNIVIKEGGEKPTLPADALCHWDICKKYNLIDFELGVKITGAGFPIYIGKMARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L F +D + GY EV PL+V + GTGQ+P M+ T D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPLVVNTASGLGTGQLPDKEGQMYHATVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 TNIFRDEILDEKDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ML E +LK+L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 DSLKEMLDHVEGLLKKLELPYHILKLCGGDMSFTSAICYDFEVWSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R++ RYR K ++ HTLNGS +A+ R + AI+EN +G V +P L PY Sbjct: 360 ESYQANRLHCRYRHTEDKKIELCHTLNGSALALPRIVAAIIENNQTPEG-VRVPKALVPY 418 Query: 417 MNNLAVIKKEH 427 V+ ++ Sbjct: 419 C-GFEVLDDKN 428 >gi|161486749|ref|YP_507395.2| seryl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 423 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 222/426 (52%), Positives = 284/426 (66%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI +I+QNPE D A++ R+ E ++ I+ LD K R L+ ++ ++ RN + +I + Sbjct: 1 MHDIDFIKQNPELFDNAMQVRNSEKVAKKIIELDVKKRHLLTQLYSLQKERNQITQEIEK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + + ++ + + S L L++ +PN+P E VPIG N Sbjct: 61 LKKNNLQCNIQ--IELSKNVTSKINDIN-NMIKEDSQLVNLLNMLPNIPDERVPIGKDEN 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G K S + H+E+GE L LMDF +A KLSG+RF +L LA L+RAL Sbjct: 118 SNVELRRHGNKTSFDFPIKTHYELGENLNLMDFKQAAKLSGSRFVILKNQLAQLDRALSN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GY+E+S P+LV + AMYG GQ+PKFADD F TT+ LIPTSEV+LTNL Sbjct: 178 FMLDIHTKEFGYSEISHPILVHESAMYGVGQLPKFADDSFKTTENFRLIPTSEVALTNLV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S+ I LPLRFT +P FRSEAGSAGRDTRGM+RQHQF K ELVSI EE S E E Sbjct: 238 SNMNINGCDLPLRFTACSPCFRSEAGSAGRDTRGMMRQHQFNKVELVSIVTEEQSAPELE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM AEEILKRL+L YRV+ LCTGD+GFSA TYD+EVW+ QN YREISSCS C FQ Sbjct: 298 RMTQIAEEILKRLELPYRVMMLCTGDMGFSASITYDIEVWIPSQNQYREISSCSNCKAFQ 357 Query: 361 SRRMNSRYRD--PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +RRMN++Y N K KF HTLNGS +A+GR +IAILENY N DGS+TIP +LR YM+ Sbjct: 358 ARRMNTKYTTIINNVKVSKFVHTLNGSALAIGRTIIAILENYQNRDGSITIPHILRKYMD 417 Query: 419 NLAVIK 424 N VIK Sbjct: 418 NQEVIK 423 >gi|38234776|ref|NP_940543.1| seryl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129] gi|81829836|sp|Q6NEN2|SYS_CORDI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|38201040|emb|CAE50764.1| seryl-tRNA synthetase [Corynebacterium diphtheriae] Length = 419 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 147/428 (34%), Positives = 242/428 (56%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + + R +P + +L DEK R IK +D+RA + +I Sbjct: 1 MIDLKLLRENPDVVRESQRIRGEDPALVDQLLEADEKRREAIKSADDLRAEHKAFGKKIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L ++ LK ++ E+ E E + + ++ NV + Sbjct: 61 QASPEERPA----LLEGSNELKSRVKAAEEAEAEALAKVNEIQMLFGNVVTDAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ I++ VG + ++H ++GE+LGL+D R TK+ GARF LTG A L+ + Sbjct: 115 DDYIVLEHVGTPRTFDFEPKDHLDLGESLGLIDVKRGTKVGGARFYYLTGDGAFLQLGML 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 E+G+ + P+LVR E M GTG + +D+++ D +L+ TSEV+L Sbjct: 175 NLAAQ-KARENGFQLMIPPVLVRPEVMSGTGFLGAHSDEIYYLERDDLYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ P+++ + FR EAGS G+DTRG+LR HQF K E+ + E++ + Sbjct: 234 YHQDEIIDLSDGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVYCKPEEAVAQ 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ +L+ E+L +++ YR++ + GDLG SA + +D E W+ QN YRE++S S C Sbjct: 294 HQALLNMEREMLAAVEVPYRIIDVAGGDLGSSAARKFDTEAWIPTQNTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD + K+ TLNG+ +A R L+AILEN ADGSV +P LRP++ Sbjct: 354 FQARRLRTRYRDESGKA-HTAATLNGT-LATTRWLVAILENNQQADGSVIVPEALRPFV- 410 Query: 419 NLAVIKKE 426 V++ + Sbjct: 411 GKEVLEPK 418 >gi|300814304|ref|ZP_07094576.1| serine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511571|gb|EFK38799.1| serine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 429 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 139/431 (32%), Positives = 224/431 (51%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ IR NPE + +KK+ + + + ++ LD+KNR +++RA+RNS S + Sbjct: 1 MLDIKLIRTNPELVKENIKKKFQDEKLKLVDEVIELDKKNREAKNHGDELRAKRNSISKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + G ++ K E + + ++L LE+E+ ++ +++ + IP + E VPIG Sbjct: 61 IGGFMKNGQKDKAESAKLEVAKINKELETLEEEQKKLDEEVRQRMLVIPQIIDETVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ + H +I E +D D + SGA F L G +A L A Sbjct: 121 DDSENVEIEKFGEPAIPSYEIPYHVDIIETFDGIDLDSSRNTSGAGFYYLKGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + + G + + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYYIPPFMIRSDVVTGVMSFAEMENMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + I + +PL T+ +P FR E G+ G + RG+ R HQF K E+V I + EDS Sbjct: 240 IGKFINTITDQDKMPLTMTSYSPCFRKEVGAHGIEERGIYRIHQFEKQEMVVICKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + + L++ R + C+GDL K+ D+E + QN Y E+ SCS Sbjct: 300 KWFENLWRNTVDFFRSLEIPVRTLECCSGDLADLKVKSLDVEAFSPRQNKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+N R R + + HTLN + VA R LIA LEN L DGS+ IP LR Y Sbjct: 360 GDAQARRLNIRLRGKDG--IYLAHTLNNTCVAPPRMLIAFLENLLQEDGSIKIPEPLRMY 417 Query: 417 MNNLAVIKKEH 427 M + ++ Sbjct: 418 MGGKDKLVPKN 428 >gi|163786666|ref|ZP_02181114.1| seryl-tRNA synthetase [Flavobacteriales bacterium ALC-1] gi|159878526|gb|EDP72582.1| seryl-tRNA synthetase [Flavobacteriales bacterium ALC-1] Length = 423 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 152/421 (36%), Positives = 238/421 (56%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + IR+N E + L KR+++ ++LDE + L K+++ +A N+ S +I Sbjct: 1 MLQVAVIRENKEDIIKRLAKRNIDATEMINEAITLDEDRKALQTKLDNTKAESNAISKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + LK +T+ LKE + LE++ ++ +L +L+ IPNVP E VP G S Sbjct: 61 GNLFKSGEAQKANLLKEKTTQLKETIKTLEQQLNDKVDALTELLYKIPNVPHESVPKGNS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N I + G P ++ H+E+ + ++DF+ K++GA F V G A L+RAL Sbjct: 121 EEDNEEIYNEGDIPELHSNAQPHWELAKKYDIIDFELGNKITGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T+E GYTE P LV + + YGTGQ+P M+ D +LIPT+EV T Sbjct: 181 IAYFLDKNTAE-GYTEYQLPHLVNEASCYGTGQLPDKDGQMYHDSRDDLYLIPTAEVPGT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ + ++ LP+ T P FR EAGS G RG+ R HQF K E++ + +S+ Sbjct: 240 NVFRNVLLNEVELPIGITGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIIRVEHPNNSYK 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + IL+ L L +R++ LC GD F++ TYD EV+ Q+ + EISS S Sbjct: 300 AFDGMIEHVKGILRELKLPFRILKLCGGDATFASAMTYDFEVFSTAQDRWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +Q+ R+ R+++ + K+ + HTLNGS +A+ R L ILENY +G + IP VL PY Sbjct: 360 TYQANRLKLRFKNSDGKN-ELCHTLNGSSLALPRVLAGILENYQTENG-IKIPEVLVPYT 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|182437423|ref|YP_001825142.1| seryl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778079|ref|ZP_08237344.1| Seryl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] gi|238688982|sp|B1VP80|SYS_STRGG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|178465939|dbj|BAG20459.1| putative seryl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658412|gb|EGE43258.1| Seryl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] Length = 425 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 149/429 (34%), Positives = 238/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +LS DE R + +++RA + S I Sbjct: 1 MIDLRLLREDPDRVRASQRARGEDVGLVDALLSADELRRSSGVRFDELRAEQRSLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A L + LK + + + E + K+L+ + N+ E+VP+G Sbjct: 61 KA----TPEERTELLKKAEQLKADVKAADAAQDEAAADAKRLLLQLGNIVHEDVPVGGEE 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + ++ + ++H E+GEALG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVVLETHGTIRDFGAEGFEPKDHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L I T E G+ + P LVR AM GTG + + A++++ D +L+ TSEV L Sbjct: 177 LVNAAIAQAT-EAGFVPMLTPALVRPRAMEGTGFLGQAAENVYHLEKDDYYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII++ LPLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S D+ Sbjct: 236 AAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L ++ L L+L ++V+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHRRLLDWEKQWLTALELPFQVIDVATGDLGSSASRKFDCEAWIPTQGKYRELTSASNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R R K ++ TLNG+ AV R ++AILEN+ DGSV +P +LRPY Sbjct: 356 DGFQARRLSVRMR--EGKKVQPLATLNGTLCAVPRTIVAILENHQLPDGSVRVPEMLRPY 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 LGGREVLEP 422 >gi|86160271|ref|YP_467056.1| seryl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|123496947|sp|Q2IGB1|SYS_ANADE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|85776782|gb|ABC83619.1| seryl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 435 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 189/430 (43%), Positives = 274/430 (63%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ + + E + L +R + L + R L +E + + +A+I Sbjct: 1 MLDLKAVAADFESFERRLARRGEGAVQALAPVKPLAARRRELNVLLEKQKKEQADANARI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + + V+ + L +++ E E EV + L +L+ +PN P + VP G Sbjct: 61 RELARTDKGA-VEGARASLRALGDEVKKTEAELGEVEAELTRLLMLVPNPPHDSVPDGKD 119 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N+++++ G++ + + H+E+GEALG++++ +A KLSG+RF++L G A LERA+ Sbjct: 120 EHDNVVVKTWGEQKAYGFTPKPHWEVGEALGVLEWQQAAKLSGSRFTILKGAAARLERAI 179 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSL 236 F ID+HT GYTE+ P LV E M GTGQ+PKF +D+F TT +LIPT+EV + Sbjct: 180 VSFFIDVHT-SRGYTEILPPYLVTGETMTGTGQLPKFEEDLFKTTNEPPMYLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI E+ ++P+ + +P FR+EAGSAGRDTRG++RQHQF K ELV +++ E+S+ Sbjct: 239 TNMHRDEIFEASAMPVSYCAFSPCFRAEAGSAGRDTRGIMRQHQFHKVELVKLSKAEESY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHE+ML A E+L+RL LH+RV LCTGD+GFS+ KTYD+EVW GQ YREISS S C Sbjct: 299 AEHEKMLDDACEVLRRLGLHHRVSLLCTGDMGFSSAKTYDIEVWCPGQGAYREISSVSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR+ RYR N K + HTLNGSGVAVGR ++AILE ADG+V IP LRPY Sbjct: 359 EDFQARRIRVRYRGENGK-PRLAHTLNGSGVAVGRTIVAILEQCQEADGTVVIPEPLRPY 417 Query: 417 MNNLAVIKKE 426 M L I E Sbjct: 418 MGGLERIAAE 427 >gi|227499894|ref|ZP_03929987.1| serine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227218003|gb|EEI83276.1| serine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 451 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 143/431 (33%), Positives = 222/431 (51%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ +R+NPE + +KK+ E + + +L LDEK R + +++R++RN S + Sbjct: 23 MIDIKLLRENPELVKENIKKKFQEEKLKLVDEVLELDEKLRAFKTEGDNLRSQRNKTSKE 82 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + K + ++L +E E E +KK + IP + + VPIG Sbjct: 83 IGALMGQGKKEAAEEAKKLVKEINDKLLHIESETEEFAKEVKKRMQVIPQIIDDTVPIGK 142 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 EN+ I G+ + H +I E+ +D D A + SGA F L G +A L A Sbjct: 143 DDTENVEIEKYGEPLVPDYEIPYHIDIMESFDGVDLDAARETSGAGFYYLRGDIARLHSA 202 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + GYT P ++R + + G + D M+ + +LI TSE S+ Sbjct: 203 ILSYARDFMI-DRGYTYYIPPFMIRSDVVTGVMSFSEMEDMMYKIEGEDLYLIGTSEHSM 261 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + I E + +PL+ T+ +P FR E G+ G + RG+ R HQF K E+V I + EDS Sbjct: 262 IGKFINTITEEEKMPLKMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSK 321 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 T + + + + L++ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 322 TLYNELWKNTVDFFRSLEIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 381 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R N F HTLN + VA R LIA LEN L DGSV IP L+ Y Sbjct: 382 GDAQARRLGIRLRGENG--TYFAHTLNNTVVAPPRMLIAFLENLLQEDGSVKIPAPLQMY 439 Query: 417 MNNLAVIKKEH 427 M I+ ++ Sbjct: 440 MGGKEKIEPKN 450 >gi|111221587|ref|YP_712381.1| seryl-tRNA synthetase [Frankia alni ACN14a] gi|111149119|emb|CAJ60802.1| Seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) [Frankia alni ACN14a] Length = 432 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 154/426 (36%), Positives = 241/426 (56%), Gaps = 9/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR+NP+ + A+ + ++ + +L LD+ NR L ++++ +ARR S + Q + Sbjct: 13 MLDKRFIRENPQAVRDAVAVKGIDLDVDELLQLDQDNRKLQFEVDEAQARRKSFAKQFAK 72 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L+ E QL L ++ + L +L+ PN+P P+G Sbjct: 73 A----DEARRAELRVEHEAFDAQLKDLREQLARTGARLSELMLLTPNIPWSGAPVGPDEA 128 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+++R+VG P +H E+ E G +F RA K++G R L G + LERA+ Sbjct: 129 ANVVLRTVGTPPEFDFTPLDHTELAEKRGWAEFARARKVAGERAYALVGDMVMLERAVHS 188 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 + +DL +T V+ P LVR+E + GTG +PK ++++ D +L T+EV+L L Sbjct: 189 YALDL-LRGREFTPVAVPALVREEPLIGTGMLPKAREEIYAIPEDDLYLAGTAEVALVGL 247 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFT 297 ++ EI+++ LP+R+ ++P FR E GSA RD RG+LR HQF K E + ++ S Sbjct: 248 HAGEILDAARLPIRYAGISPCFRREIGSASRDVRGLLRVHQFEKVEQFVLCAADEAESAR 307 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H +L+ AE IL L L Y VV TGD+G + D+ W +RE SCST Sbjct: 308 WHAELLATAERILSDLGLCYEVVECATGDMGVGKFRMNDINTWFPSLGRFRETHSCSTLH 367 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RYRDP+ +++F HTLN + VA R L A+LEN+ ADG+V +P VLRPY+ Sbjct: 368 DWQARRANLRYRDPDG-TIRFAHTLNNTAVATPRLLAALLENFQTADGAVRVPEVLRPYL 426 Query: 418 NNLAVI 423 +I Sbjct: 427 GGRELI 432 >gi|323358560|ref|YP_004224956.1| seryl-tRNA synthetase [Microbacterium testaceum StLB037] gi|323274931|dbj|BAJ75076.1| seryl-tRNA synthetase [Microbacterium testaceum StLB037] Length = 421 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 152/427 (35%), Positives = 241/427 (56%), Gaps = 10/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D+ +R++PE + + R P + L+ D R I E++RA +N++ ++ Sbjct: 1 MIDLTLLREDPELVKRSQIARGESPDSVDEALAADRDRRAAITAFEELRAAQNAHGKRVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E AL E L EQ+ + E ++ ++ I N+ L+ VP Sbjct: 61 QAPKEEK----AALVAEAKQLSEQVKAAQHAVGEAEAAADAALAKIENIVLDGVP-AGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +R+ G+ P+ R+H E+GE LG +D +R TK+SG+RF LTG A LE AL Sbjct: 116 ENFVTLRTHGEIPTYDFEPRDHLELGEMLGAIDMERGTKVSGSRFYFLTGIGARLELALM 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 +D + G+T + P LVR E M GTG + + AD+++ + +L+ TSEV L Sbjct: 176 TLALDRAL-QAGFTPMIPPTLVRPEVMRGTGFLGQHADEVYHLPKEDLYLVGTSEVPLAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI++ + R+ + +RSEAGS G+DTRG++R HQF K E+ T D+ E Sbjct: 235 YHMDEILDLERGAKRYAGWSTCYRSEAGSYGKDTRGIIRVHQFNKLEMFVYTDPADAEAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+++ E +L+ L L YRV+ + GDLG SA + +D+E W+ Q+ YRE++S S C Sbjct: 295 HDRLVAMQEAMLQDLGLAYRVIDVAAGDLGSSAARKFDIEAWVPTQDAYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR+N+R+R TLNG+ +A R ++A+LE + DGSVT+P VLRPY+ Sbjct: 355 YQARRLNTRFRPE-GSKTAPVATLNGT-LATTRWIVALLETHQREDGSVTVPEVLRPYLG 412 Query: 419 NLAVIKK 425 L V++ Sbjct: 413 GLEVMEP 419 >gi|124026368|ref|YP_001015484.1| seryl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] gi|166222761|sp|A2C409|SYS_PROM1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123961436|gb|ABM76219.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] Length = 426 Score = 366 bits (939), Expect = 5e-99, Method: Composition-based stats. Identities = 181/430 (42%), Positives = 267/430 (62%), Gaps = 8/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R+NP + LK R ++ + + + L +K ++A+ NS ++GQ Sbjct: 1 MIDQRLLRENPNLISEGLKSRGMDVDLGPLQKFCKDLKDLEEKRNSLQAQGNSIGKEVGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I +G + + L+ + + +K+Q+ I+E+EE + + L + I C+PN+P + G Sbjct: 61 KIKQGLPHDSEEISNLRVKGNQIKKQVGIIEEEEKSISNKLNEQILCLPNLPEKNSLEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N +R G +P + + +EH+EI L L D +R++ ++ +RF L H A LER+ Sbjct: 121 NEKDNKELRRWG-EPISGNTLKEHWEIANQLNLWDSERSSVIAKSRFVTLFKHAAKLERS 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+DLH + GY EV P LV ++ G+GQ+PKFA++ F C D WL PT+EV + Sbjct: 180 LINFMLDLHI-KKGYLEVLPPALVNTASLTGSGQLPKFAEESFRCADDDLWLTPTAEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII LPL++ +P FR EAGS GRDTRG++R HQF K EL + E S Sbjct: 239 TSLHRGEIIPRDLLPLKYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFSTPETSE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E++ S AE +L+ L+L YRV+ LCTGDLGFSA KTYDLEVWL G N +REISSCS C Sbjct: 299 DALEQITSDAESVLQELELPYRVIQLCTGDLGFSAKKTYDLEVWLPGANTFREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR + R +D N+K HTLNGSG+A+GR + AILEN +DGS+ +P L PY Sbjct: 359 GDFQARRSSIRTKD-NNKKNILLHTLNGSGLAIGRTMAAILENGQQSDGSINLPKALIPY 417 Query: 417 MNNLAVIKKE 426 ++ E Sbjct: 418 F-GSNKLQPE 426 >gi|297572279|ref|YP_003698053.1| seryl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296932626|gb|ADH93434.1| seryl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 425 Score = 366 bits (939), Expect = 5e-99, Method: Composition-based stats. Identities = 152/429 (35%), Positives = 240/429 (55%), Gaps = 12/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ +R+NPE + + + R +P + IL+ DEK R + ED+RA++ + S +G Sbjct: 1 MIDIRTLRENPEAVRASQQARGDDPALVDTILAADEKRRASQQAFEDLRAQQKNLSRTVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + + + + +Q+ LE E ++ + + + N L VP G Sbjct: 61 KASPEERPA----ILAQAKDMSDQVKALEAESNKAAEEFQAAMMKLANPVLPTVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L ++ + ++H ++ EA+G +D +R TK+SG+RF L G A LE A Sbjct: 117 DYEVLREVGTIRDFAAEGFEPKDHLDVAEAIGAVDMERGTKVSGSRFYYLKGIGARLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L D +G+T ++ P LVR E M GTG + +D+++ D +L TSEV+L Sbjct: 177 LLTMAAD-QAEANGFTLMNTPTLVRPEVMGGTGFLGAHSDEIYYLPADDLYLTGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ P R+ + +R EAGS GRDTRG++R HQF K E+ S ED+ Sbjct: 236 AGYHSDEILDLSDGPKRYAGWSTCYRREAGSYGRDTRGIIRVHQFNKVEMFSFCTAEDAA 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R L+ EE+L++++L YRV+++ GDLG SA + +D E WL QN Y E++S S C Sbjct: 296 DEHQRFLAWEEEMLQKVELPYRVINVAAGDLGSSAAQKFDCEAWLPTQNRYMEVTSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR+ R R + TLNG+ +A R L+A+LE Y ADGS+ IP+ LR Y Sbjct: 356 TTFQARRLGIRERVNGG--TQAVATLNGT-LATTRWLVAMLETYQQADGSIYIPSALRSY 412 Query: 417 MNNLAVIKK 425 + +I Sbjct: 413 LGGREIIAP 421 >gi|313813962|gb|EFS51676.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA1] Length = 424 Score = 366 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 146/429 (34%), Positives = 237/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R +P + +++ DE R I E++RA + +I Sbjct: 1 MIDPKLLRTDPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + T T+ ++ L+K E + +L + N+ ++ VP G Sbjct: 61 KASGDEKAE----LLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ +++ Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS ++ + L + ++V+ + +GDLG SA + +D WL Q+ YREI+S S C Sbjct: 296 AWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWLPTQDRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV IP LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGREFIEP 422 >gi|262183297|ref|ZP_06042718.1| seryl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 420 Score = 366 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 148/427 (34%), Positives = 245/427 (57%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NP+ + + R +P + +L+ DE+ R I K + +R+ + + +IG Sbjct: 1 MIDLKFLRENPDVVRASQVNRGEDPSLVDQLLAADEQRRAAIVKADQLRSEQKAFGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L ++ LKE++ +E + + +L + NV Sbjct: 61 QASPEERPA----LLEGSNELKEKVKAAGEEAAAAEAKVTELQYQLSNVVEGAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ I++ VG+KP ++H E+GE LGL+D R K+ GARF LTG A L+ + Sbjct: 115 DDFIVLEEVGEKPQFDFEPKDHLELGETLGLIDVKRGAKVGGARFYYLTGDGAFLQLGML 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 E G+ + P+LVR + M GTG + + +D+++ D +L+ TSEV+L Sbjct: 175 MLAAQ-KAREAGFKLMIPPVLVRPDVMQGTGFLGQHSDEIYYLPADDLYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ PL++ + FR EAGS G+DTRG+LR HQF K E+ + ED+ Sbjct: 234 YHKEEIIDLSKGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVYCKPEDAEEM 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+++L+ +++L+ ++L YR + + GDLG SA + +D E W+ Q+ YRE++S S C Sbjct: 294 HQKLLNMEKDMLEAMELSYRTIDIAGGDLGSSAARKFDNEAWVPTQDTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+++RYRD N K ++ TLNG+ +A R L+AILEN+ ADGSV +P LRP++ Sbjct: 354 FQARRLSTRYRDENGK-TQYAATLNGT-LATTRWLVAILENHQQADGSVVVPEALRPFV- 410 Query: 419 NLAVIKK 425 V+ Sbjct: 411 GKDVLYP 417 >gi|325279156|ref|YP_004251698.1| seryl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] gi|324310965|gb|ADY31518.1| seryl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] Length = 424 Score = 366 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 149/427 (34%), Positives = 239/427 (55%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML++++I++N E + L ++ + E I++LD + + L ++ E +A+ N + +I Sbjct: 1 MLNLKFIQENKETVIERLAVKNFDARESVEKIIALDNQRKSLQQEAEAKQAQMNIIAKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ + G + + ET+ LK + L EV + L ++ +PN+P V G S Sbjct: 61 GKLMQSGQKEAAEKARQETADLKSAIAGLNSRRTEVSNELTDILLRLPNMPHASVAKGKS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N +++ V P H+E+ L+DF+ K++GA F + G A L+RAL Sbjct: 121 EADNEIVKIVDNIPQKHENDLPHWELARKYDLIDFETGVKITGAGFPLYKGLGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 F +D + + GY EV PL+V ++ YGTGQ+P M+ D +LIPT+EV +T Sbjct: 181 INFFLDENI-KAGYQEVQPPLMVNADSGYGTGQLPDKDGQMYYVNEDNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y I++ LP++ T + FR EAGS G+D RG+ R HQF K E+V ITR E S+ Sbjct: 240 NIYRDVILDGDQLPVKNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVQITRPEVSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ E +L +L L YR+V LC GD+ F++ T+D EV+ Q + E+SS S Sbjct: 300 ALEGMVKHVESLLIKLGLPYRIVRLCGGDISFTSALTFDFEVYSKAQEKWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R++D K HTLNGS +A+ R + A+LENY +G + +P VL+ +M Sbjct: 360 EFQANRLKLRFKDKGDKKTTTCHTLNGSSLALPRIVAALLENYQCEEG-IRLPEVLQTFM 418 Query: 418 NNLAVIK 424 +I+ Sbjct: 419 -GTEMIR 424 >gi|328757719|gb|EGF71335.1| seryl-tRNA synthetase [Propionibacterium acnes HL020PA1] Length = 424 Score = 366 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 145/429 (33%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R + + +++ DE R I +++RA + +I Sbjct: 1 MIDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHDNLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + T T+ ++ L+K E + +L + N+ ++ VP G Sbjct: 61 KASGDEKAE----LLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ +++ Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS ++ + L + ++V+ + +GDLG SA + +D WL QN YREI+S S C Sbjct: 296 AWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV IP LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGREFIEP 422 >gi|34557266|ref|NP_907081.1| seryl-tRNA synthetase [Wolinella succinogenes DSM 1740] gi|46577165|sp|Q7M9J5|SYS_WOLSU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|34482982|emb|CAE09981.1| SERYL-TRNA SYNTHETASE [Wolinella succinogenes] Length = 428 Score = 366 bits (938), Expect = 6e-99, Method: Composition-based stats. Identities = 189/432 (43%), Positives = 262/432 (60%), Gaps = 19/432 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + + E + L KRHLE E L + + ++ E+++A +N+ S G Sbjct: 1 MIDLKLLMNDFEEVAERLAKRHLEADFLEQARLLAGQYKAKKRESEELQAEQNAKSKLFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q EG +D+LK E TLK +L + E + L+ L IPN+P E+ PIG Sbjct: 61 QYKKEGK--EIDSLKAELDTLKIRLSEILPEVSVLERELESLALIIPNLPDEKTPIGRDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++NI IR V + +EH+E+ E G ++FDR KL+ +RFSVL A + RAL Sbjct: 119 HDNIEIRRVLEPKMFDFRPKEHWELAEQNGWIEFDRGVKLAKSRFSVLRKEGARMSRALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------------DG 225 +M+D + G+ EV P++V E + GTGQ+PKF +D+F + Sbjct: 179 SYMLDFN-HSRGFEEVVTPVIVNRETLLGTGQLPKFENDLFKISEVIEEEQGGEKGRGHE 237 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPT+EV+LTNLY EII LPL T P FR EAGSAGRDTRG++RQHQF K E Sbjct: 238 LYLIPTAEVTLTNLYRDEIIPHDELPLLLTAHTPCFRKEAGSAGRDTRGIIRQHQFDKVE 297 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 LV++T+ E+S ++M+ CA ++L L L +R+V LC GDLGF A T D+EVWL GQN Sbjct: 298 LVALTKPEESDAIQQKMIDCASDLLSSLGLPHRLVQLCGGDLGFGASNTVDIEVWLPGQN 357 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISS S +FQ+RR RY+D + K + HTLNGS +AVGR L+AI+ENY NADG Sbjct: 358 CYREISSISNTRDFQARRAMIRYKDED-KKNRLVHTLNGSSLAVGRTLVAIMENYQNADG 416 Query: 406 SVTIPTVLRPYM 417 ++ IP VLR Y+ Sbjct: 417 TIEIPEVLRRYL 428 >gi|78777864|ref|YP_394179.1| seryl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] gi|123754693|sp|Q30PY7|SYS_SULDN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|78498404|gb|ABB44944.1| seryl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] Length = 415 Score = 366 bits (938), Expect = 6e-99, Method: Composition-based stats. Identities = 177/420 (42%), Positives = 254/420 (60%), Gaps = 7/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ ++++ + + L ++ ++ L + +E+ ++ E ++A +NS S G Sbjct: 1 MIDLKLLQKDFQTISNKLSRKGVDADLLENLKIRNEELKVAKVAYETLQAAQNSMSKDFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 EG + LK + K ++ + +L+ L IPN+P ++VP G Sbjct: 61 IYKKEGRDT--TELKAKVDENKIKIAEALDTQRIKQEALEYLAMSIPNIPDDDVPDGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+ V +EH+E+ G +DF+R KL+ +RFSV G A LERAL Sbjct: 119 NDNVEIKKVLTPKEFSFTPKEHWELAGQNGWIDFERGVKLATSRFSVSFGMGAKLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM++ + S+ G+ EVS P LV A+ GTGQ+PKF DD++ +LIPT+EV +TN Sbjct: 179 NFMLNFN-SKRGFEEVSVPSLVNRAALEGTGQLPKFEDDLYKIQGQELFLIPTAEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY EI+ + LP++ T FR EAG+AGRDTRGM+RQHQF K ELVSIT+ + S Sbjct: 238 LYQDEILHVERLPIKMTAYTSCFRKEAGAAGRDTRGMIRQHQFHKVELVSITKPQQSDEI 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M+ A ++L L+L +R+V LC GDLGF A KT DLEVWL GQN YREISS S Sbjct: 298 FDEMVQTASDLLSALELPHRLVRLCGGDLGFGAAKTVDLEVWLPGQNAYREISSVSNTRE 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR R++D F HTLNGS +AVGR L+AI+EN+ N DGS+TIP VL PY+N Sbjct: 358 FQARRAKIRFKD--GDKNSFVHTLNGSSLAVGRTLVAIMENFQNEDGSITIPKVLSPYLN 415 >gi|88599731|gb|ABD45200.1| seryl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 426 Score = 366 bits (938), Expect = 6e-99, Method: Composition-based stats. Identities = 222/426 (52%), Positives = 284/426 (66%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI +I+QNPE D A++ R+ E ++ I+ LD K R L+ ++ ++ RN + +I + Sbjct: 4 MHDIDFIKQNPELFDNAMQVRNSEKVAKKIIELDVKKRHLLTQLYSLQKERNQITQEIEK 63 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + + ++ + + S L L++ +PN+P E VPIG N Sbjct: 64 LKKNNLQCNIQ--IELSKNVTSKINDIN-NMIKEDSQLVNLLNMLPNIPDERVPIGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G K S + H+E+GE L LMDF +A KLSG+RF +L LA L+RAL Sbjct: 121 SNVELRRHGNKTSFDFPIKTHYELGENLNLMDFKQAAKLSGSRFVILKNQLAQLDRALSN 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GY+E+S P+LV + AMYG GQ+PKFADD F TT+ LIPTSEV+LTNL Sbjct: 181 FMLDIHTKEFGYSEISHPILVHESAMYGVGQLPKFADDSFKTTENFRLIPTSEVALTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S+ I LPLRFT +P FRSEAGSAGRDTRGM+RQHQF K ELVSI EE S E E Sbjct: 241 SNMNINGCDLPLRFTACSPCFRSEAGSAGRDTRGMMRQHQFNKVELVSIVTEEQSAPELE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM AEEILKRL+L YRV+ LCTGD+GFSA TYD+EVW+ QN YREISSCS C FQ Sbjct: 301 RMTQIAEEILKRLELPYRVMMLCTGDMGFSASITYDIEVWIPSQNQYREISSCSNCKAFQ 360 Query: 361 SRRMNSRYRD--PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +RRMN++Y N K KF HTLNGS +A+GR +IAILENY N DGS+TIP +LR YM+ Sbjct: 361 ARRMNTKYTTIINNVKVSKFVHTLNGSALAIGRTIIAILENYQNRDGSITIPHILRKYMD 420 Query: 419 NLAVIK 424 N VIK Sbjct: 421 NQEVIK 426 >gi|167755149|ref|ZP_02427276.1| hypothetical protein CLORAM_00654 [Clostridium ramosum DSM 1402] gi|167705199|gb|EDS19778.1| hypothetical protein CLORAM_00654 [Clostridium ramosum DSM 1402] Length = 426 Score = 366 bits (938), Expect = 6e-99, Method: Composition-based stats. Identities = 145/429 (33%), Positives = 221/429 (51%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI +R+NP + +KK+ + + + LD+ R ++ K ++R++RN S + Sbjct: 1 MIDIAILRENPTLVKENMKKKFQDDKIGLVDEAYKLDKDYREVLTKASELRSKRNKLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EGN + K + S + ++L LE E + S LK ++ IPN E VP+G Sbjct: 61 IGQFMREGNKDAAENNKKQVSAMADELAKLEDLETQYGSELKAIMMKIPNFIDESVPLGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H EI E +D D A +++G F L G +A L A Sbjct: 121 DDSENVEITKYGEPVVPDFEIPYHTEIMENFDGIDMDAAGRVAGQGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T V P ++R + G + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYVIPPYMIRSNVVTGVMSFEEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I+E LP +T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDNILEEDKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E++ + ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFEKLWNNTVDLFRSLDIPVRTLECCSGDLADLKSKSIDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + Q+RR+N R N K F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 TDAQARRLNIRINGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPKALQPY 417 Query: 417 MNNLAVIKK 425 M I K Sbjct: 418 MGGKEKITK 426 >gi|296272111|ref|YP_003654742.1| seryl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] gi|296096286|gb|ADG92236.1| seryl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] Length = 414 Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats. Identities = 178/419 (42%), Positives = 266/419 (63%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ ++++ + + AL ++ + + + +L + +++E++ A +NS S + G Sbjct: 1 MIDIKLLQKDFDEVATALNRKGVSQDILDNLKALSVDAKAKRQEMENVTAEQNSLSKEFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG + L+ + LK Q LE++ + L +I +PN+P +VP G Sbjct: 61 RYKKEGL--DIAPLQENINKLKNQKQELEEQVRVLEEELSSIILGVPNMPDSDVPDGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+++ ++G+KP+ +EH+++GE+ G +DF R KL+ +RF+ + G A LERAL Sbjct: 119 NENVVLETIGEKPNFSFEPKEHWDLGESNGTLDFIRGVKLAKSRFTAMRGQAAKLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +M+ + E G+ E P + A+ GTGQ+PKF +D+F + +LIPT+EV+LTN Sbjct: 179 NYMLKFNA-ERGFEEWYVPFMANTNALQGTGQLPKFGEDLFKIEGEDLYLIPTAEVALTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY+ EII + LP T+ P FR EAGSAGRDTRG++RQHQF K E+V+IT +E S Sbjct: 238 LYNDEIIPVEELPYLMTSYTPCFRKEAGSAGRDTRGLIRQHQFDKVEMVAITTQEQSEEV 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M++CA ++L L L ++ V LCTGDLGFSA +T DLEVWL GQ YREISS S + Sbjct: 298 FEKMVACASDLLTSLGLAHQKVMLCTGDLGFSATRTIDLEVWLPGQGKYREISSISNTRD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY+D K HTLNGS +AVGR L+AI+ENY DG++TIP VL+ YM Sbjct: 358 FQARRAKIRYKD--GKKNILAHTLNGSSLAVGRTLVAIMENYQQEDGTITIPEVLKKYM 414 >gi|315105281|gb|EFT77257.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA2] Length = 424 Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats. Identities = 146/429 (34%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R + + +++ DE R I E++RA + +I Sbjct: 1 MIDPKLLRTDPDAVRRSQIARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + T T+ ++ L+K E + +L + N+ ++ VP G Sbjct: 61 KASGDEKAE----LLSRTKTISGEVADLKKAADEADTKFTELAKTLGNIVIDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ +++ Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS ++ + L + ++V+ + +GDLG SA + +D WL QN YREI+S S C Sbjct: 296 AWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV IP LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGREFIEP 422 >gi|167770820|ref|ZP_02442873.1| hypothetical protein ANACOL_02173 [Anaerotruncus colihominis DSM 17241] gi|167666860|gb|EDS10990.1| hypothetical protein ANACOL_02173 [Anaerotruncus colihominis DSM 17241] Length = 427 Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats. Identities = 140/429 (32%), Positives = 223/429 (51%), Gaps = 6/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NPE + ++K+ E P + +L D+K R + +++RA+RN+ S Q Sbjct: 1 MLDIKFVRANPEAVRENIRKKFQEEKLPLVDEVLERDQKFRETKTRCDNLRAQRNTISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + K + + + ++L LE+ E ++ + +++ + IPN+ VPIG Sbjct: 61 IGGLMGKGLREEAEQAKAQVTAMAKELEELEELETKLEAEIRERMMVIPNIIDPSVPIGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H EI E L +D D A K SG F L G +A L A Sbjct: 121 DDSENVEVERFGEPTVPPFEVPYHVEIMERLNGIDLDSARKTSGNGFYYLCGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYYIPPFMIRSNVVNGVMSFAEMENMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +++ LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTMLDEDKLPQTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMIVVCKPEDSA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 AWYDKLWKNTVDFFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R+ K F HTLN + VA R LIA LEN LN DGSV IP LR Y Sbjct: 360 GDAQARRLGIRVRNKE-KGNYFAHTLNNTVVAPPRMLIAFLENNLNDDGSVRIPQPLRMY 418 Query: 417 MNNLAVIKK 425 M I+ Sbjct: 419 MGGKDAIRP 427 >gi|197124303|ref|YP_002136254.1| seryl-tRNA synthetase [Anaeromyxobacter sp. K] gi|238689868|sp|B4UFJ8|SYS_ANASK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|196174152|gb|ACG75125.1| seryl-tRNA synthetase [Anaeromyxobacter sp. K] Length = 435 Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats. Identities = 189/430 (43%), Positives = 271/430 (63%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ + + E + L +R + L + R L +E + + +A I Sbjct: 1 MLDLKAVAADFESFERRLARRGEGAVQALAPVKPLAARRRELNVLLEKQKKEQAEANANI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 Q + V+ + L +++ E +V + L +L+ +PN P + VP G Sbjct: 61 RQLARTDKDA-VEGARASLRALGDEVKKTEAALGDVEAELTRLLMVVPNPPSDSVPDGKD 119 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N+++R+ G++ + + H+E+GEALG++++ +A KLSG+RF++L G A LERA+ Sbjct: 120 EHDNVVVRTWGEQKAYGFTPKPHWELGEALGVLEWQQAAKLSGSRFTILKGAAARLERAI 179 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSL 236 F ID+HT GYTE+ P LV E M GTGQ+PKF +D+F TT +LIPT+EV + Sbjct: 180 VSFFIDVHT-SRGYTEILPPYLVTGETMTGTGQLPKFEEDLFKTTNEPPMYLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI E+ ++P+ + +P FR+EAGSAGRDTRG++RQHQF K ELV +++ E+S Sbjct: 239 TNMHRDEIFEASAMPVSYCAFSPCFRAEAGSAGRDTRGIMRQHQFHKVELVKLSKAEESE 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHE+ML A E+L+RL LH+RVV LC GD+GFS+ KTYD+EVW GQ YREISS S C Sbjct: 299 AEHEKMLDDACEVLRRLGLHFRVVLLCAGDMGFSSAKTYDIEVWCPGQGAYREISSVSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR+ RYR N K + HTLNGSGVAVGR ++AILE ADG+V IP LRPY Sbjct: 359 EDFQARRIRVRYRGENGK-PRLAHTLNGSGVAVGRTIVAILEQCQEADGTVVIPEPLRPY 417 Query: 417 MNNLAVIKKE 426 M L I E Sbjct: 418 MGGLERIAAE 427 >gi|89890029|ref|ZP_01201540.1| seryl-tRNA synthetase [Flavobacteria bacterium BBFL7] gi|89518302|gb|EAS20958.1| seryl-tRNA synthetase [Flavobacteria bacterium BBFL7] Length = 423 Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats. Identities = 162/426 (38%), Positives = 244/426 (57%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I IR++ + ALKKR+++ P E +S+DEK R L ++++ A N S QI Sbjct: 1 MLQIAAIREHKDAFAQALKKRNIDALPMLENAISVDEKRRSLQAQLDETLAVSNKLSKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G GN + LK++T LKE+ L +E + L+ ++ IPN+P VP G S Sbjct: 61 GDLYKSGNAKEANELKSQTGELKEKSKQLNEELTIAVTELQDILYTIPNIPQNSVPAGNS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N ++ G P+ ++ H+E+ + ++DF+ TK++GA F V A L+RAL Sbjct: 121 DEDNEILSQHGVIPTLHAGAKPHWELVKDYDIIDFELGTKITGAGFPVYKRKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T GY E+ P LV + + +GTGQ+P M+ D +LIPT+EV +T Sbjct: 181 INYFLDKNT-AAGYEEMQVPHLVNEASGFGTGQLPDKEGQMYHVGVDDLYLIPTAEVPIT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY +++E+K LP+ T P FR EAGS G D RG+ R HQF K E++ I + S + Sbjct: 240 NLYRGDLLEAKDLPIAMTGYTPCFRREAGSYGSDVRGLNRLHQFDKVEILRIEHPDQSDS 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + IL+ L+L YR++ LC GDLGF++ TYD E++ Q+ + E+SS S Sbjct: 300 ALDAMVVHVKNILEELELPYRILRLCGGDLGFTSTLTYDFEIYSTAQDKWLEVSSVSNFM 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQS R+ R+R+ K + HTLNGS +A+ R L ILENY G + IP VL+PY Sbjct: 360 AFQSNRLKLRFRNSEGK-TELAHTLNGSSLALPRILAGILENYQTESG-IQIPEVLKPYC 417 Query: 418 NNLAVI 423 +I Sbjct: 418 -GFDII 422 >gi|118475748|ref|YP_892488.1| seryl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] gi|166201245|sp|A0RQK5|SYS_CAMFF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|118414974|gb|ABK83394.1| seryl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] Length = 414 Score = 365 bits (937), Expect = 8e-99, Method: Composition-based stats. Identities = 184/419 (43%), Positives = 264/419 (63%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M++++ I N + + LK + ++ + +L + +I +++E+++A +N+ S ++G Sbjct: 1 MINLKLIETNFDEFNAKLKAKKVDEGVLKNLLDTYNELKIKKQELENLQAVQNAKSKEVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 G + LK E K+ + E+ + L + S +PNV ++VP+G Sbjct: 61 ILARSG--ADTTLLKTELEENKKLMQTASNLVSELETKLDTVASRVPNVIDDDVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+++ + +EHFE+GE LG +DF KLSG+RF+VL A L RAL Sbjct: 119 NDNVCIKTILEPREFNFTPKEHFELGENLGWLDFATGAKLSGSRFTVLRSDGARLSRALV 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FMID +T G+ V+ P LV +YGTGQ+PKF +D++ D +LIPTSEV +TN Sbjct: 179 NFMIDFNT-ARGFELVNVPFLVNSNTLYGTGQLPKFEEDLYKIRDEDLYLIPTSEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y++EII ++LP++ T + FR EAGSAGRDTRGM+RQHQF K ELVSI++ EDS Sbjct: 238 IYNNEIIPVENLPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELVSISKPEDSAKI 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M+SCA ++LK L L +R + LC+ DLGF A KT DLEVWL GQ YREISS S + Sbjct: 298 LDEMVSCASDMLKELGLPHRHMMLCSADLGFGAAKTIDLEVWLPGQGKYREISSISNTRD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY+D K HTLNGS +AVGR LIAI+ENY N+DGS+ IP VL+ YM Sbjct: 358 FQARRAKIRYKD--GKKNALVHTLNGSSLAVGRTLIAIMENYQNSDGSINIPEVLKKYM 414 >gi|225022356|ref|ZP_03711548.1| hypothetical protein CORMATOL_02395 [Corynebacterium matruchotii ATCC 33806] gi|305680222|ref|ZP_07403030.1| serine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] gi|224944869|gb|EEG26078.1| hypothetical protein CORMATOL_02395 [Corynebacterium matruchotii ATCC 33806] gi|305659753|gb|EFM49252.1| serine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] Length = 419 Score = 365 bits (937), Expect = 8e-99, Method: Composition-based stats. Identities = 143/427 (33%), Positives = 240/427 (56%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NP+ + + + R P + +++ DE R IK ++++A +N+ +IG Sbjct: 1 MIDLKFLRENPDLVRDSQRTRGANPILVDQLIAADESRRAAIKAADELKAEQNAFGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L + LK ++ E E +++ L I N+ Sbjct: 61 QAAPEDRPA----LLAGANELKAKVKAAEDARKEAEAAVTDLQMRIDNIVEGAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +++ VG+ S ++H ++G +LGL+D DR K+SGARF LTG A L+ A+ Sbjct: 115 DDFVVLEHVGEPRSFDFTPKDHLDLGISLGLIDMDRGAKVSGARFYYLTGDGAFLQLAML 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 G+ + P+LVR E M GTG + + A++++ D +L+ TSEV+L Sbjct: 175 TLAAQ-KARTAGFKLMIPPVLVRPEVMSGTGFLGEHAEEIYYLERDDLYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ + P ++ + FR EAGS G+DTRG++R HQF K E+ + E++ + Sbjct: 234 YHQDEIIDLSNGPRKYAGWSSCFRREAGSYGKDTRGIIRVHQFDKLEMFVYCKPEEAAAQ 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ +L ++L +++ YRV+ + GDLG SA + +D E W+ QN YRE++S S C Sbjct: 294 HQELLGMERDMLSAIEVPYRVIDVAGGDLGSSAARKFDTEAWVPTQNTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR+ +RYRD K+ TLNG+ +A R L+AILEN+ ADGSV +P LRP++ Sbjct: 354 YQARRLRTRYRDEAGKA-HIAATLNGT-LATTRWLVAILENHQQADGSVVVPEALRPFV- 410 Query: 419 NLAVIKK 425 V + Sbjct: 411 GKEVFEP 417 >gi|161350030|ref|YP_397784.2| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] Length = 425 Score = 365 bits (936), Expect = 9e-99, Method: Composition-based stats. Identities = 174/422 (41%), Positives = 255/422 (60%), Gaps = 8/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + IR+NP ++ L R + +I L K + + +I +++ S IGQ Sbjct: 1 MLDQKLIRENPTSVEENLSLRGKVYKISHIHELTVKKKEIDIEISSLQSESKKLSKLIGQ 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IA+ N ++ LK + + ++ LE+++ + + I +PN +E PIG Sbjct: 61 VIAKSQNTNSQELNDLKKRGNEYRIKISELEEKQRILDKQVDDEIYNLPNFSSKEAPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N+ I++ G + H+EIGE+L + D ++TK+S +RF L G+ A LERA Sbjct: 121 DESDNVQIKTWG-DTLIRENIKSHWEIGESLNIFDSVKSTKISKSRFITLIGNGAKLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSL 236 L FM+D+HT ++GY E+ P LV E++ G+GQ+PKF+ + C+ D WL PT+EV L Sbjct: 180 LINFMLDIHT-KNGYLELMPPALVNSESLRGSGQLPKFSNESFKCSNDDLWLSPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T + +EII+ K LP+++ +P FR EAGS GRDT+G++R HQF K EL S Sbjct: 239 TAFHRNEIIDPKQLPIKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYWFCDPSKSL 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++ S AE ILK+L+L YR+V +CTGDLGFS+ +T+DLEVWL YREISSCS C Sbjct: 299 EAHKKITSDAESILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSSKCYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + R +K + HTLNGSG+A+GR + AILEN DGSV IP L PY Sbjct: 359 LDFQARRSSIR--SKINKKNTYLHTLNGSGLAIGRTMAAILENGQQKDGSVKIPDALVPY 416 Query: 417 MN 418 Sbjct: 417 FG 418 >gi|24217038|ref|NP_714519.1| seryl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|45659295|ref|YP_003381.1| seryl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|30173162|sp|Q8EY78|SYS_LEPIN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|59798552|sp|Q72LS1|SYS_LEPIC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|24198447|gb|AAN51537.1| seryl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|45602541|gb|AAS72018.1| seryl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 417 Score = 365 bits (936), Expect = 9e-99, Method: Composition-based stats. Identities = 180/420 (42%), Positives = 256/420 (60%), Gaps = 6/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD+++I +N E L L+ R + + + S+ ++ R K+ + +R RN S ++ Sbjct: 1 MLDLRYITENTEDLKKVLELRGFKEIGIIDELKSIIQRKREFQKEADILREERNKASKEV 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ G + + + E++ +E + + ++L + +PN+ +VP G S Sbjct: 61 GKIKQSGG--DITKISASVKLVGEKIKEIESKLEQEENALLNINLGLPNILDPKVPPGKS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++NI+ VGK P+ + + HFEIGEAL +DF++ KLSGAR A LERAL Sbjct: 119 EHDNIVQYEVGKIPTFQFVPKTHFEIGEALHWIDFEKGVKLSGARAYTYWKDGARLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 FM+D+HT EH YTEV P +V DE+M TGQ PKF D+ + D LIPT+EV LT Sbjct: 179 MNFMLDVHTKEHDYTEVWVPSMVNDESMMATGQYPKFKDEFYRIDKDELNLIPTAEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY EII LP+ T FR EAGS G+DTRG++R HQF K ELV + EDS Sbjct: 239 NLYRDEIIPEDQLPISVTAHTSCFRREAGSYGKDTRGLVRVHQFQKVELVKFCKPEDSEE 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EH++MLS AE ILK+L+L YRV+ LC+GD+ ++ TYD+EVW+ G N Y EISS S Sbjct: 299 EHKKMLSHAENILKKLELPYRVIILCSGDISANSSITYDIEVWMPGLNRYMEISSVSNFR 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RY+ + K+ + HT+NGSG+A+GR AILEN+ N DG++ IP VL+ Y Sbjct: 359 DFQARRGKIRYKSKDGKN-QLVHTINGSGLALGRTYAAILENFQNEDGTLRIPEVLKSYF 417 >gi|284988898|ref|YP_003407452.1| seryl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] gi|284062143|gb|ADB73081.1| seryl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] Length = 433 Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats. Identities = 160/427 (37%), Positives = 251/427 (58%), Gaps = 9/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R + + +L+ D R +K+ +D+RA + + S + Sbjct: 1 MIDLRLVREHPDLVKASQRARGADESRVDELLAADAARREAVKRTDDLRAEQKAASQAVK 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A +E +++D + + +K+ E+ ++L+ I NV + VP G Sbjct: 61 KASSEERPAVLDRARALAAEVKD----AEEALRGADAALRAAHLRIANVVHDGVPPGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + +R+VG+ P+ R+H EIGEALG +D +R K+SGARF LTG A LE AL Sbjct: 117 DA-VTLRTVGEVPAYDFPVRDHLEIGEALGAIDTERGAKVSGARFYFLTGPGAMLEFALA 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 Q I G+T V AP LVR EAM GTG + + ++++ D +L+ TSEV+L Sbjct: 176 QLAI-GQAVSAGFTPVVAPALVRPEAMEGTGFLGEHDEEVYRVERDDLYLVGTSEVALAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + S+E+++ + PLR+ + FR EAGS G+DTRG++R H F K E+ S R ED+ E Sbjct: 235 MRSNEVLDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHWFDKVEMFSFCRPEDAAEE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L+ EE L+ L+L YRVV + GDLG SA + YD+E W Q YRE++S S C Sbjct: 295 HRRLLAWEEEFLQALELPYRVVDIAAGDLGTSAARKYDIEAWFPSQGTYRELTSTSDCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+N+RYRD K+ + TLNG+ AV R + +LE + ADGSV +P LRP++ Sbjct: 355 FQARRLNTRYRDAEGKN-QTAATLNGTLCAVARTIACLLEVHQRADGSVYVPKALRPWLG 413 Query: 419 NLAVIKK 425 + + Sbjct: 414 GVEALTP 420 >gi|239946845|ref|ZP_04698598.1| seryl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921121|gb|EER21145.1| seryl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] Length = 425 Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats. Identities = 208/424 (49%), Positives = 283/424 (66%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L +R +EP S I LD + R + I++ + R S +G Sbjct: 1 MLNIKWIRENQELFDEKLSQRFIEPMSSKIAMLDGEKRKITSLIQEFQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A + + L+ + + E+L LE++ + + L +PN+P EEVP G + Sbjct: 61 -MASKSGEEFEGLQRDVKHINEKLEELEQDLNNNNELNELLNM-LPNIPDEEVPYGIDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+R+ G + + L+++HFE+G L LMDF++ K+SGARF L G LA LERAL Sbjct: 119 MNKLVRTYG-ETNPNALNKQHFELGTKLNLMDFEQTAKISGARFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT E + E+S P+LVRD AMY GQ+PKFA++ F TT+G LIPT+EVSL N+ Sbjct: 178 FMIDVHTKEFDFFEISPPILVRDNAMYNAGQLPKFAEESFATTNGYRLIPTAEVSLVNIV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R+ P FRSEAGS+ RDTRGM+R HQF K ELVSIT +E+S TEHE Sbjct: 238 ADTIIPREKLPMRYVAYTPCFRSEAGSSSRDTRGMIRLHQFGKVELVSITTQEESKTEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E IL++L+L YRV+ LCTGD+GF+A KTYD+EVWL GQ YREI+SCS CG+FQ Sbjct: 298 YITNASETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNEDGSITIPDVLINYMGGL 417 Query: 421 AVIK 424 I Sbjct: 418 QKIT 421 >gi|150016311|ref|YP_001308565.1| seryl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|149902776|gb|ABR33609.1| seryl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 425 Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats. Identities = 144/428 (33%), Positives = 228/428 (53%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + +K + + + + +L+LD + R + +++E +RA RN S Q Sbjct: 1 MLDIKFVRENPEIVKQNIKNKFQDNKLGLVDEVLTLDIELRKVKQEVEALRADRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + +K + + E++ L+ +E E+ +K ++ IPN+ VPIG Sbjct: 61 IGGLMAQGKKEEAEEIKKKVNADSERMAELDVKEKELEEKVKVIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H +I E L +D D A K++G F L G++A L A Sbjct: 121 DDSENVEVEKFGEPVVPDFEIPYHTDIMEKLSGIDLDSARKVAGNGFYYLMGNIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSQVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I+ SLP T+ +P FR E G+ G + RG+ R HQF K E+V + + EDS Sbjct: 240 IGKFIDTILPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVVCKPEDSM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++M ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 AWYDKMWKDTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + K F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 GDAQARRLKIRVDGKDGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPVALQPY 417 Query: 417 MNNLAVIK 424 M + VIK Sbjct: 418 MGGMTVIK 425 >gi|168177860|ref|ZP_02612524.1| seryl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|182670409|gb|EDT82383.1| seryl-tRNA synthetase [Clostridium botulinum NCTC 2916] Length = 425 Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 224/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++K+ + +++LD + R + + +++RA+RN S Q Sbjct: 1 MLDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDTELRNIKPEADNLRAKRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + + + L LEK E E+ +KK++ IPN+ VPIG Sbjct: 61 IGGLMAQGKKEEAEELKKQVTAASDHLAELEKRESELEEKIKKIMITIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIQRYGEPVVPDFEIPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSEVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I SLP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSV 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N K F HTLN + VA R LIA LEN LN DGSV IP L+PY Sbjct: 360 GDAQARRLKIRVAGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPVPLQPY 417 Query: 417 MNNLAVIK 424 M + VIK Sbjct: 418 MGGMTVIK 425 >gi|229587145|ref|YP_002845646.1| seryl-tRNA synthetase [Rickettsia africae ESF-5] gi|259511679|sp|C3PLR3|SYS_RICAE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|228022195|gb|ACP53903.1| Seryl-tRNA synthetase [Rickettsia africae ESF-5] Length = 425 Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats. Identities = 207/423 (48%), Positives = 280/423 (66%), Gaps = 3/423 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L +R +EP S I LD K R + I++ + R S +G Sbjct: 1 MLNIKWIRENKELFDEKLSQRFIEPMSSKIAMLDGKKRKITSLIQEFQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A + + L+ + + E+L LE+E + + L PN+P EEVP G + Sbjct: 61 -MASKSGEEFEGLQRDVKHINEKLEALEQELNNNNELNELLNM-FPNIPDEEVPYGMDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+R+ G + + L+++HFE+G L LMDF++ K+SG RF L G LA LERAL Sbjct: 119 MNKLVRTYG-ETNPNALNKQHFELGIKLNLMDFEQTAKISGTRFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT E + E+S P+LVRD AMY GQ+PKFA++ F TT+G LIPT+EVSL N+ Sbjct: 178 FMIDVHTKEWDFFEISPPVLVRDNAMYNAGQLPKFAEESFATTNGYRLIPTAEVSLVNMV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R+ P FRSEAGS+G+DTRGM+R HQF K ELVSIT E+S EHE Sbjct: 238 ADTIIPREKLPIRYVAYTPCFRSEAGSSGKDTRGMIRLHQFGKVELVSITTPEESTNEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E IL++L+L YRV+ LCTGD+GF+A KTYD+E+WL GQ YREI+SCS CG+FQ Sbjct: 298 YITNASETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEIWLPGQKQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNEDGSITIPDVLINYMGGL 417 Query: 421 AVI 423 I Sbjct: 418 QKI 420 >gi|161485956|ref|NP_739334.2| seryl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259505719|ref|ZP_05748621.1| serine--tRNA ligase [Corynebacterium efficiens YS-314] gi|30173164|sp|Q8FLY5|SYS_COREF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|259166692|gb|EEW51246.1| serine--tRNA ligase [Corynebacterium efficiens YS-314] Length = 419 Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats. Identities = 145/427 (33%), Positives = 239/427 (55%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R NP+ + + R +P + +LS DE R I+ +++R+ + + +IG Sbjct: 1 MIDLKFLRDNPDVVRTSQITRGEDPALVDELLSADEARRQAIQVADELRSEQKAFGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L ++ LK ++ E + + L + NV Sbjct: 61 QASPEDRPA----LLEGSNELKAKVKEAEAAQETAEQRVHDLQMKLSNVVEGAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +++ VG+ + ++H E+GE+LGL+D R TK+SGARF LTG A L+ + Sbjct: 115 DDFVVLEHVGEPRTFDFEPKDHLELGESLGLIDMKRGTKVSGARFYYLTGDGAMLQLGML 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 T G+T + P+LVR E M GTG + +++++ D +L+ TSEV+L Sbjct: 175 TLAAQKAT-AAGFTMMIPPVLVRPEIMAGTGFLGDHSEEIYYLERDDMYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ + P+++ + FR EAGS G+DTRG+LR HQF K E+ + E++ + Sbjct: 234 YHKDEIIDLNNGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYCKPEEAEEQ 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L +++L +++ YR++ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HRRLLEMEKDMLAAVEVPYRIIDVAGGDLGASAARKFDTEAWVPTQGTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ RR+ +RYRD N K + TLNG+ +A R L+AILEN ADGSV +P LRP++ Sbjct: 354 FQGRRLQTRYRDENGK-PQIAATLNGT-LATTRWLVAILENNQQADGSVIVPEALRPFV- 410 Query: 419 NLAVIKK 425 V++ Sbjct: 411 GKDVLEP 417 >gi|23494568|dbj|BAC19534.1| putative seryl-tRNA synthetase [Corynebacterium efficiens YS-314] Length = 448 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 145/427 (33%), Positives = 239/427 (55%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R NP+ + + R +P + +LS DE R I+ +++R+ + + +IG Sbjct: 30 MIDLKFLRDNPDVVRTSQITRGEDPALVDELLSADEARRQAIQVADELRSEQKAFGKKIG 89 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L ++ LK ++ E + + L + NV Sbjct: 90 QASPEDRPA----LLEGSNELKAKVKEAEAAQETAEQRVHDLQMKLSNVVEGAP--AGGE 143 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +++ VG+ + ++H E+GE+LGL+D R TK+SGARF LTG A L+ + Sbjct: 144 DDFVVLEHVGEPRTFDFEPKDHLELGESLGLIDMKRGTKVSGARFYYLTGDGAMLQLGML 203 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 T G+T + P+LVR E M GTG + +++++ D +L+ TSEV+L Sbjct: 204 TLAAQKAT-AAGFTMMIPPVLVRPEIMAGTGFLGDHSEEIYYLERDDMYLVGTSEVALAG 262 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ + P+++ + FR EAGS G+DTRG+LR HQF K E+ + E++ + Sbjct: 263 YHKDEIIDLNNGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYCKPEEAEEQ 322 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L +++L +++ YR++ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 323 HRRLLEMEKDMLAAVEVPYRIIDVAGGDLGASAARKFDTEAWVPTQGTYRELTSTSNCTT 382 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ RR+ +RYRD N K + TLNG+ +A R L+AILEN ADGSV +P LRP++ Sbjct: 383 FQGRRLQTRYRDENGK-PQIAATLNGT-LATTRWLVAILENNQQADGSVIVPEALRPFV- 439 Query: 419 NLAVIKK 425 V++ Sbjct: 440 GKDVLEP 446 >gi|297625341|ref|YP_003687104.1| Seryl-tRNA synthetase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921106|emb|CBL55653.1| Seryl-tRNA synthetase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 424 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 157/431 (36%), Positives = 235/431 (54%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + + R + + L+ DE R I E RA + S G Sbjct: 1 MIDPKLLRTDPDRVRRSQRARGESVELVDQALAADEARRSSISAFEQARAEQKSL----G 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 IA+ + +AL + T L ++ L+ HE +++ N+ E+VP G Sbjct: 57 ALIAKASGDERNALLSRTKELAAKVRELDASAHEADEHYTEVVKQFGNIVFEDVPEGGED 116 Query: 120 NENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + A R+H E+GE L +D +R K+SG+RF L G A LE A Sbjct: 117 DLFVIDTEGTPRDFAGEGITIRDHLELGEMLDAIDMERGAKVSGSRFYYLKGPGAMLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L QF + E G T + P LV AM GTG + + ADD++ D ++L+ T+EV L Sbjct: 177 LIQFAL-HKALEWGLTPMIPPALVNPAAMEGTGFLGQAADDVYYLERDNQYLVGTAEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++SK LPLR+ +P++R EAGS G+DTRG+ R H F K E+ + R ED+ Sbjct: 236 AAYHSDEILDSKELPLRYAGFSPAYRREAGSYGKDTRGIFRVHWFDKFEMFTYCRPEDAV 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHER+L+ +E + L + + V+ + +GDLG SA + YD W+ Q+ YREI+S S C Sbjct: 296 AEHERLLAHEKEFISALGIPFEVLDVASGDLGLSAARKYDCYGWVPSQDKYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR+N R RD K + TLNG+ A+ R ++ ILENY DGSV IP VLRPY Sbjct: 356 TEFQARRLNIRMRD--GKQVTPLATLNGTLCAMTRMIVMILENYQQVDGSVVIPEVLRPY 413 Query: 417 MNNLAVIKKEH 427 + V + Sbjct: 414 LGGREVFTPKG 424 >gi|116329504|ref|YP_799224.1| seryl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329819|ref|YP_799537.1| seryl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282406|sp|Q04WE1|SYS_LEPBJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|122282717|sp|Q04XA4|SYS_LEPBL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116122248|gb|ABJ80291.1| Serine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123508|gb|ABJ74779.1| Serine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 417 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 179/420 (42%), Positives = 255/420 (60%), Gaps = 6/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD+ +I +N E L L+ R + + + S+ ++ R L ++++ +R RN S ++ Sbjct: 1 MLDLHYITENTEDLKKVLELRGFKEVGIIDELKSIIQRKRELQREVDLLREERNKVSKEV 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ G + + + E++ +E + + + L + +PN+ +VP G S Sbjct: 61 GRIKQSGG--DITEISASVKLVGEKIKEIETKLEQEENVLININLGLPNILDPKVPNGKS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N++ VGK PS + HFEIGEAL ++F++ KLSGAR A LERAL Sbjct: 119 EYDNVVQYEVGKIPSFSFPPKPHFEIGEALNWINFEKGVKLSGARAYTYWKDGAKLERAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 FM+D+HT EHGYTEV P +V DE+M TGQ PKF D+ + D LIPT+EV LT Sbjct: 179 MNFMLDVHTKEHGYTEVWVPSMVNDESMTATGQYPKFKDEFYRIEKDELNLIPTAEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY EII LP+ T FR EAGS G+DTRG++R HQF K ELV + EDS Sbjct: 239 NLYRDEIIPEDQLPISVTAHTSCFRREAGSYGKDTRGLVRVHQFQKVELVKFCKPEDSEE 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EH++MLS AE ILK+L L YRV+ LC+GD+ ++ TYD+EVW+ G N + EISS S Sbjct: 299 EHKKMLSHAENILKKLKLPYRVIILCSGDISANSSITYDIEVWMPGLNRFMEISSVSNFR 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RY+ + K+ + HT+NGSG+A+GR AILEN+ +A+G+V IP VL+ Y Sbjct: 359 DFQARRGKIRYKSKDGKN-QLVHTINGSGLAIGRTYAAILENFQDANGTVHIPEVLKSYF 417 >gi|313829289|gb|EFS67003.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA2] Length = 424 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 146/429 (34%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R + + +++ DE R I E++RA + +I Sbjct: 1 MIDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + T T+ ++ L+K E + +L + N+ ++ VP G Sbjct: 61 KASGDEKAE----LLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ +++ Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS ++ + L + ++V+ + +GDLG SA + +D WL QN YREI+S S C Sbjct: 296 AWHEKLLSFEKDFITALQISFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV IP LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRVIIMLLENHQQADGSVRIPEALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGREFIEP 422 >gi|282882666|ref|ZP_06291276.1| serine--tRNA ligase [Peptoniphilus lacrimalis 315-B] gi|281297479|gb|EFA89965.1| serine--tRNA ligase [Peptoniphilus lacrimalis 315-B] Length = 429 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 139/430 (32%), Positives = 223/430 (51%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ IR NPE + +KK+ + + + ++ LD+KNR +++RA+RNS S + Sbjct: 1 MLDIKLIRTNPELVKENIKKKFQDEKLKLVDEVIELDKKNREAKNHGDELRAKRNSISKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + G ++ K E + + ++L LE+E+ ++ +++ + IP + E VPIG Sbjct: 61 IGGFMKNGQKDKAESAKLEVAKINKELETLEEEQKKLDEEVRQRMLVIPQIIDETVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ + H +I E +D D + SGA F L G +A L A Sbjct: 121 DDSENVEIEKFGEPMIPSYEIPYHVDIIETFDGIDLDSSRNTSGAGFYYLKGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + + G + + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYYIPPFMIRSDVVTGVMSFAEMENMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + I + +PL T+ +P FR E G+ G + RG+ R HQF K E+V I + EDS Sbjct: 240 IGKFINTITDEDKMPLTMTSYSPCFRKEVGAHGIEERGIYRIHQFEKQEMVVICKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + + + L++ R + C+GDL K+ D+E + QN Y E+ SCS Sbjct: 300 KWFENLWRNTVDFFRSLEIPVRTLECCSGDLADLKVKSLDVEAFSPRQNKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+N R R + + HTLN + VA R LIA LEN L DGS+ IP LR Y Sbjct: 360 GDAQARRLNIRLRGKDG--IYLAHTLNNTCVAPPRMLIAFLENLLQEDGSIKIPEPLRMY 417 Query: 417 MNNLAVIKKE 426 M + + Sbjct: 418 MGGKDKLVPK 427 >gi|315110490|gb|EFT82466.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA2] Length = 424 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 146/429 (34%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R + + +++ DE R I E++RA + +I Sbjct: 1 MIDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + L + T T+ ++ L+K E + +L + N+ ++ VP G Sbjct: 61 KASGDEKAE----LLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ +++ Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS ++ + L + ++V+ + +GDLG SA + +D WL QN YREI+S S C Sbjct: 296 AWHEKLLSFEKDFITALQISFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV IP LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRIIIMLLENHQQADGSVRIPEALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGREFIEP 422 >gi|158316889|ref|YP_001509397.1| seryl-tRNA synthetase [Frankia sp. EAN1pec] gi|158112294|gb|ABW14491.1| seryl-tRNA synthetase [Frankia sp. EAN1pec] Length = 420 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 151/426 (35%), Positives = 244/426 (57%), Gaps = 9/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR+NP+ + A++ + ++ + +L LD++NR L ++++ +ARR S + Q + Sbjct: 1 MLDKRFIRENPDAVKEAVRLKGVDLDVDELLQLDQENRKLQFEVDEAQARRKSFAKQFAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L+ E + QL L ++ + + +L+ P +P E P+G + Sbjct: 61 A----DEARRAELRAEHAEFDRQLRDLREQLTRTSTRMSELMLLTPGIPWEGAPVGPDES 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+++R+VG +P +H E+ E G +F RA +++G R L G + LERA+ Sbjct: 117 ANVVVRTVGTRPEFDFTPIDHTELAEKRGWAEFARARRVAGERAYALVGDMVMLERAVHS 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNL 239 + +DL E +T VS P LV++ + GTG +PK ++++ +L T+EV+L L Sbjct: 177 YALDL-LRERDFTPVSVPALVKEGPLVGTGMLPKAREEIYEIPADDAFLAGTAEVALVGL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV--SITREEDSFT 297 ++ EI++++ LP+R+ ++P FR E GSA RD RG+LR HQF K E + +S Sbjct: 236 HAGEILDARRLPIRYAGISPCFRREIGSASRDVRGLLRVHQFEKVEQFVLCVNDPAESAR 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H +L+ AE IL L LHY VV TGD+G + D+ W +L+RE SCST Sbjct: 296 WHAELLATAEHILADLGLHYEVVECSTGDMGLGKFRMNDINTWFPTLDLFRETHSCSTLH 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RYRD + ++F HTLN + VA R L AILEN+ AD V +P VLRPY+ Sbjct: 356 DWQARRANLRYRDADGN-VRFAHTLNNTAVATPRLLAAILENFQTADHQVRVPEVLRPYL 414 Query: 418 NNLAVI 423 ++ Sbjct: 415 GGRDLL 420 >gi|16226853|gb|AAL16281.1|AF428351_1 At1g11870/F12F1_29 [Arabidopsis thaliana] Length = 512 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 142/440 (32%), Positives = 233/440 (52%), Gaps = 19/440 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N E ++I ++ R+ E +L L E L K++E +R RN+ + + Sbjct: 77 IDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEVERLREERNNVAK---KM 133 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S + L E LKE L LE++ ++ L+ + IPN+ +VP+G + Sbjct: 134 KGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHPDVPVGGEDSS 193 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + VG ++H ++G+ L L+DFD A ++SG++F L LE AL + Sbjct: 194 -AIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLLEMALLNW 252 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--GRWLIPTSEVSLTNL 239 + + GYT ++ P +VR + G P+ + + D + LI T+E+ + + Sbjct: 253 TLS-QVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTDQCLIGTAEIPVGGI 311 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+ +LPL++ + FR+EAG+AG T+G+ R HQF K E+ I + EDS + H Sbjct: 312 HMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQPEDSESFH 371 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + ++ E++ L LH++ + + T DLG A + +D+E W+ G + EISS S C + Sbjct: 372 QELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMPGLGRFGEISSASNCTDC 431 Query: 360 QSRRMNSRYR--------DPNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 QSRR+ RYR K + KF HTLN + AV R ++ +LENY DGSV Sbjct: 432 QSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVPRMMVCLLENYQQEDGSV 491 Query: 408 TIPTVLRPYMNNLAVIKKEH 427 IP LRP+M + +IK +H Sbjct: 492 VIPEPLRPFMGGIELIKPKH 511 >gi|298207340|ref|YP_003715519.1| seryl-tRNA synthetase [Croceibacter atlanticus HTCC2559] gi|83849976|gb|EAP87844.1| seryl-tRNA synthetase [Croceibacter atlanticus HTCC2559] Length = 423 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 158/426 (37%), Positives = 235/426 (55%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + IR + + ALKKR+ + E L D+ + ++ + A N S +I Sbjct: 1 MLQVNNIRAHKDAYITALKKRNFDATSLFEDALKYDDMRKASQTDLDAVLAESNRLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G +A+K +T+ LKE L+ E + L+ ++ IPN+P + VP G Sbjct: 61 GMLFKSGEHQKANAVKAQTADLKENSKRLQDELRDAEEKLQNILFEIPNIPNDLVPAGVD 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N + + G P S+ H+E+ + ++DF+ K++GA F V G A L+RAL Sbjct: 121 EADNEEVFNEGDIPVLAEGSQPHWELAKKYDIIDFELGNKITGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 + +D +T GY EV P LV + + +GTGQ+P M+ T D +LIPT+EV +T Sbjct: 181 ISYFLDKNT-AAGYNEVQVPHLVNEASGFGTGQLPDKEGQMYEATVDKLFLIPTAEVPIT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY ++++ K LP+ T P FR EAGS G RG+ R HQF K E+V I + EDS+ Sbjct: 240 NLYRGDLLDEKDLPITHTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEKAEDSYA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 ++M+ ++IL+ L L +R++ LC GDLGF++ TYD EV+ Q+ + EISS S Sbjct: 300 VLDQMVEHVKDILRELKLPFRILRLCGGDLGFTSSLTYDFEVFSTAQDRWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ RY+ + + HTLNGS +A+ R L ILENY DG + IP VL PY Sbjct: 360 TFQANRLKLRYKSADGSK-QLAHTLNGSALALPRVLAGILENYQTPDG-IKIPEVLVPYC 417 Query: 418 NNLAVI 423 VI Sbjct: 418 -GFDVI 422 >gi|88603748|ref|YP_503926.1| seryl-tRNA synthetase [Methanospirillum hungatei JF-1] gi|121721452|sp|Q2FS27|SYS_METHJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|88189210|gb|ABD42207.1| seryl-tRNA synthetase [Methanospirillum hungatei JF-1] Length = 425 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 165/428 (38%), Positives = 239/428 (55%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSL---DEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NP+ + LKKR+ + +I L D ++R LI + ++R RRNS S Sbjct: 1 MLDIRFVRANPDAIREDLKKRNDMEKLAWIDDLLVQDIRHRELIGQTNELRRRRNSISYD 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I +A G AL E + L ++ E E E+ ++ + IPN+ E VP+G Sbjct: 61 INRAKKAG--EDASALIAEAAGLPGRIKENEAEMEEISKKIRYYLMRIPNILHESVPVGA 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +N+ ++ G + + H ++ DF+RATK SGA F L G+L L+ A Sbjct: 119 DDTQNVEVKRYGTPRTFTFELKNHGQLAADNDWADFERATKTSGAGFYFLKGNLVLLDLA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSL 236 L +F +D+ E GYT + P ++ ++ + F M+ D +LI TSE + Sbjct: 179 LQRFSLDI-LMEKGYTPIIPPYMINRKSYEEVTDLDDFEKVMYKIEDDDAYLIATSEHPM 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +Y EI E K LPLR L+P FR E GS G DT+G+ R HQF K E +DS+ Sbjct: 238 AAMYQDEIFEEKDLPLRLAGLSPCFRREIGSHGLDTKGLFRVHQFHKVEQFVYCHPDDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 T HE + AEEI ++L++ YRVV++CTGD+G A K YD+E W+ +N YRE+ SCS C Sbjct: 298 TIHEELRENAEEIFQKLEIPYRVVNICTGDIGTVAAKKYDIEAWMPRENEYREVVSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +Q+ R+N R RD +S +F HTLN + +A R + AILEN DGSV IP VLRP Sbjct: 358 TTYQAVRLNIRVRDKEDFESKQFVHTLNSTAIATSRAMRAILENNQQEDGSVVIPKVLRP 417 Query: 416 YMNNLAVI 423 YMN+ + Sbjct: 418 YMNDKEFL 425 >gi|195625240|gb|ACG34450.1| seryl-tRNA synthetase [Zea mays] Length = 512 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 141/442 (31%), Positives = 231/442 (52%), Gaps = 22/442 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N + + ++ R+ + + L ++ L K++E +RA RN+ + + Sbjct: 74 IDFKWIRDNRDAVADNIRTRNSTANLDLVFELYDQYLTLQKEVERLRAERNAVA---NKM 130 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + S+ AL E LKE L LE++ ++ L+ IPN +VP+G + Sbjct: 131 KGKLDPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDVPVGGEESS 190 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 +L + VG + S ++H ++G+ L L DFD A ++SG++F L LE AL + Sbjct: 191 -VLRKEVGSQRSFNFAIKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNW 249 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 I S+ G+T + P +VR + G P+ + + LI T+E+ + + Sbjct: 250 AISE-VSKKGFTPLITPEIVRSSVVEKCGFQPRAKNTQVYSIEDSDQCLIGTAEIPVGGI 308 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+ +LPL++ + FR+EAG+AG TRG+ R HQF K E+ R E+S H Sbjct: 309 HMDSILAESALPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESGKWH 368 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E +++ E++ L LH++ + + TGDLG A + +D+E W+ G Y EISS S C ++ Sbjct: 369 EELITIEEDLYASLGLHFKTLDMATGDLGAPAYRKFDIEAWMPGLERYGEISSASNCTDY 428 Query: 360 QSRRMNSRYR----------DPNSK-----SLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 QSRR+ RYR K +F HTLN + VAV R ++ ILEN+ D Sbjct: 429 QSRRLGIRYRPSPSEPPSTSTKKGKGAASGPTQFVHTLNATAVAVPRLIVCILENFQQGD 488 Query: 405 GSVTIPTVLRPYMNNLAVIKKE 426 GS+ +P LRPYM L ++ + Sbjct: 489 GSIVVPEPLRPYMGGLELLSPK 510 >gi|189219734|ref|YP_001940375.1| Seryl-tRNA synthetase [Methylacidiphilum infernorum V4] gi|238692085|sp|B3DX68|SYS_METI4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189186592|gb|ACD83777.1| Seryl-tRNA synthetase [Methylacidiphilum infernorum V4] Length = 421 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 193/420 (45%), Positives = 254/420 (60%), Gaps = 7/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDIQ IR N L R LE ++I LD K R L +IE RA RN S +I Sbjct: 1 MLDIQLIRHNLAQTKQKLALRSKGLETLLDHIFELDFKKRSLQSEIEKYRALRNKQSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +G V+ +E + ++ +EKE + + + L+ +PN+P + VP G Sbjct: 61 GLKKIKG--ENVEGQFSELKKMGSRIEEMEKELIQFENQINTLLLSLPNIPHDSVPTGGP 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++ G+ A + H+E+G LG++D +R KLSG+ FS+ TG+ A L+RAL Sbjct: 119 EANKVVKT-WGEPRQANFPLKTHWELGRELGILDLERGAKLSGSGFSLFTGNGAKLQRAL 177 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 QFM+ +HT EHGY E+ P LV ++ M GTG +PKFA DM+ T D +LIPT EV LT Sbjct: 178 IQFMLTIHTEEHGYKELWPPYLVTEDCMRGTGHLPKFALDMYATDKDNLYLIPTGEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + EI+ SLPLR+ P FR EAGSAG+DTRG+LR HQF K ELV IT+ E+S+T Sbjct: 238 NFHRDEILAESSLPLRYVAYTPCFRREAGSAGKDTRGLLRLHQFDKVELVQITKPENSYT 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+S AE IL+ L+L YRVV L + D+GF A K YDLEVW G + E+SS S Sbjct: 298 ALEEMVSHAENILRSLNLCYRVVLLASQDMGFGAAKCYDLEVWSPGIQSWLEVSSVSNME 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 NFQSRRMN RY+ + K++ HTLNGSG A+ R + AILENY DG V IP +R Y Sbjct: 358 NFQSRRMNLRYKSSSGKNI-LCHTLNGSGTALPRLVAAILENYQKEDGRVLIPEKIRTYF 416 >gi|254172748|ref|ZP_04879422.1| seryl-tRNA synthetase [Thermococcus sp. AM4] gi|214032904|gb|EEB73732.1| seryl-tRNA synthetase [Thermococcus sp. AM4] Length = 455 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 163/448 (36%), Positives = 247/448 (55%), Gaps = 27/448 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+ IR+ PE + L KR + + IL LD K R +KKI +R RN + Q Sbjct: 1 MLDIKLIREKPELVKKDLLKRGETEKVKWIDEILELDRKWRENLKKINQLRKERNQLAVQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ G V+ L ++ + +Q+ LE+E E+ + + +PN+ E VP+G Sbjct: 61 IGKRKKAGEP--VEELLARSNEIVKQIEELEREVEELRKKIDYYLWRLPNITHESVPVGE 118 Query: 118 SANENILIRSVGKKPSAI--------------------HLSREHFEIGEALGLMDFDRAT 157 S +N+ IR GK R H ++ E L D +RA Sbjct: 119 SDEDNVPIRFWGKAKVWEGFLETFKEQSLGKMEYELLSWRPRLHVDMLELLRGADLERAA 178 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K+SG+RF L L L+ AL +F +D E G+T V P +VR G F D Sbjct: 179 KVSGSRFYYLLNELVILDLALIRFALD-KLIEKGFTPVIPPYMVRRFVEEGATTFDDFED 237 Query: 218 DMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LIPT+E L ++++EI++ K LPL + ++P FR EAG+AG+DT+G+ Sbjct: 238 VIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIF 297 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E +R E+S+ HE++++ AEEI + L++ YRVV++CTGDLG+ A K YD Sbjct: 298 RVHQFHKVEQFVYSRPEESWEWHEKIIANAEEIFQELEIPYRVVNICTGDLGYVAAKKYD 357 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E W+AGQ +RE+ S S C ++Q+RR+N R+RD + KF HTLN + +A R ++AI Sbjct: 358 IEAWMAGQGKFREVVSASNCTDWQARRLNIRFRDKTHEKPKFVHTLNSTAIATSRAIVAI 417 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIK 424 LEN+ +G V +P L Y ++ Sbjct: 418 LENHQTEEGIVKLPKALWKYTGFKEILP 445 >gi|312137683|ref|YP_004005019.1| seryl-tRNA ligase sers [Rhodococcus equi 103S] gi|311887022|emb|CBH46331.1| seryl-tRNA ligase SerS [Rhodococcus equi 103S] Length = 419 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 148/426 (34%), Positives = 244/426 (57%), Gaps = 11/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NP+ + + + R +P + +L D R I + +RA + + ++G Sbjct: 1 MIDLKFLRENPDAVRTSQRTRGEDPGLVDALLEADASRRAAILAGDTLRAEQKAFGKKVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L + L +++ E +HE + L + I N+ + P Sbjct: 61 QASPEERPA----LLAGSKELAQKVKDAEAAQHEAQAKLDEAHRAISNIVQDGAP-AGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ I + +VG+ P+ ++H E+GE+LGL+D +R K+SG+RF LTG A L+ + Sbjct: 116 DDFITLETVGEIPTFDFEPKDHLELGESLGLIDMERGAKVSGSRFYFLTGFGAMLQLGML 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q +G+T + P+LVR E M GTG + + +D+++ D +L+ TSEV L Sbjct: 176 QLAAQ-KAMANGFTMMIPPVLVRPEVMQGTGFLGQHSDEVYHLADDDLYLVGTSEVPLAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ + P R+ + FR EAGS G+DTRG++R HQF K E+ + + ED+ E Sbjct: 235 YHSGEILDLSNGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L+ ++L + L YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 295 HQRLLAWERDMLDAMGLPYRVIDVAGGDLGSSAARKFDCEAWVPTQQAYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR++ RYRD N K + TLNG+ +A R L+AILEN+ ADGSV +P L P++ Sbjct: 355 YQARRLSVRYRDENGK-PQTAATLNGT-LATTRWLVAILENHQQADGSVRVPAALVPFV- 411 Query: 419 NLAVIK 424 V+ Sbjct: 412 GREVLT 417 >gi|220919077|ref|YP_002494381.1| seryl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|254783000|sp|B8J8M9|SYS_ANAD2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|219956931|gb|ACL67315.1| seryl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 435 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 191/430 (44%), Positives = 271/430 (63%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ + + E + L +R + L + R L +E + + +A I Sbjct: 1 MLDLKAVAADFESFERRLARRGEGAVQALAPVKPLAARRRELNVLLEKQKKEQADANANI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 Q + V+ + L +++ E EV + L +L+ +PN P + VP G Sbjct: 61 RQLARTDKDA-VEGARASLRALGDEVKKTEAALGEVEAELTRLLMLVPNPPSDSVPDGKD 119 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N+++R+ G+K + + H+E+GEALG++++ +A KLSG+RF++L G A LERA+ Sbjct: 120 EHDNVVVRTWGEKKAYGFTPKPHWELGEALGVLEWQQAAKLSGSRFTILKGAAARLERAI 179 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSL 236 F ID+HT GYTE+ P LV E M GTGQ+PKF +D+F TT +LIPT+EV + Sbjct: 180 VSFFIDVHT-SRGYTEILPPYLVTGETMTGTGQLPKFEEDLFKTTNEPPMYLIPTAEVPV 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI E+ ++P+ + +P FR+EAGSAGRDTRG++RQHQF K ELV +++ E+S Sbjct: 239 TNMHRDEIFEANAMPVSYCAFSPCFRAEAGSAGRDTRGIMRQHQFHKVELVKLSKAEESD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHE+ML A E+L+RL LH+RV LCTGD+GFS+ KTYD+EVW GQ YREISS S C Sbjct: 299 AEHEKMLDDACEVLRRLGLHHRVSLLCTGDMGFSSAKTYDIEVWCPGQGAYREISSVSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR+ RYR N K + HTLNGSGVAVGR ++AILE ADG+V IP LRPY Sbjct: 359 EDFQARRIRVRYRGENGK-PRLAHTLNGSGVAVGRTIVAILEQCQEADGTVVIPEPLRPY 417 Query: 417 MNNLAVIKKE 426 M L I E Sbjct: 418 MGGLERIAAE 427 >gi|227538353|ref|ZP_03968402.1| serine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|227241868|gb|EEI91883.1| serine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] Length = 423 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 148/426 (34%), Positives = 234/426 (54%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + +IR+N + + L ++ + + I+SLDE R + + + A N+ + QI Sbjct: 1 MLQLNYIRENRDKVIERLGVKNFKELGLVDEIISLDELRRKTQSESDSLSAEANAAAKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + +G + +K+++S KEQ+ L ++ EV L I +PN+P VP G + Sbjct: 61 GDLMRQGKKEEAETVKSQSSGYKEQVKQLTEKLSEVEQELHNKIVQLPNLPHSSVPAGVA 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N +I + G PS + H+E+ ++DF+ TK++GA F V G A L+RAL Sbjct: 121 AEDNEVIYTAGDVPSLDEDALPHWELAAKYDIIDFELGTKVAGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 F +D GY EV P++V + + +GTGQ+P M+ D +LIPT+EV +T Sbjct: 181 INFFLDQAAEV-GYKEVQVPIVVNEASGFGTGQLPDKEGQMYHVGQDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y I++++ P+R P FR EAGS G RG+ R HQF K E V I + S+ Sbjct: 240 NMYRDVIVKAEDFPIRHCAYTPCFRREAGSYGAHVRGLNRLHQFDKVEAVQIVHPDQSYA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M + +L++L+L YRV+ LC GD+ F+A TYDLEV+ Q + E+SS S Sbjct: 300 VIEEMCKYVQGLLEKLELPYRVLRLCGGDMSFTAALTYDLEVYSTAQKRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +Q+ R+ R+++ K ++ HTLNGS +A+ R + ++LEN G + +P L PY Sbjct: 360 TYQANRLKVRFKNEEGK-MQLAHTLNGSALALPRIVASLLENNQTGKG-IKVPAALVPYT 417 Query: 418 NNLAVI 423 I Sbjct: 418 -GFEYI 422 >gi|325270159|ref|ZP_08136766.1| serine--tRNA ligase [Prevotella multiformis DSM 16608] gi|324987460|gb|EGC19436.1| serine--tRNA ligase [Prevotella multiformis DSM 16608] Length = 429 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 148/422 (35%), Positives = 241/422 (57%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H E +L D R +K++ + ++N S Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFSGAREAVEKVLEYDRLRRETQQKLDTNKQKQNQLSRQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + D++K E + LK L++ + + ++ IPN+P ++VP G Sbjct: 61 IGGLMKEGKKNEADSIKEEVAELKSADKALQEIMEKAQKDMTDVLLTIPNIPNDDVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N++++ G+KP + H+++ + L+DFD K++GA F + G +A +RA Sbjct: 121 DASDNVVVKEGGQKPDLPADALCHWDLLKKFNLVDFDLGVKITGAGFPLYIGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY EV PL+V ++ GTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPLVVNQDSGLGTGQLPDKEGQMYHANLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI++ + LP++ + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 TNIFRDEILDEQDLPVKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ML E +LK+L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 ASLDEMLEHVEGLLKKLELPYHILRLCGGDMSFTSAICYDFEVWSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R++ RYR + K ++ HTLNGS +A+ R + AI+EN +G V +P VL PY Sbjct: 360 ESYQANRLHCRYRHADDKKIELCHTLNGSALALPRIVAAIIENNQTPEG-VRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|300933155|ref|ZP_07148411.1| seryl-tRNA synthetase [Corynebacterium resistens DSM 45100] Length = 424 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 149/428 (34%), Positives = 244/428 (57%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + + R +P + +L D + R I + RA + + S +G Sbjct: 1 MIDLKLLRENPDVVRASQRTRGEDPALVDQLLEADARRREAISAADAARAEQKAFSKSMG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + + AL+ + E + +E ++ E ++ L + NV E P Sbjct: 61 QQMRTASDEEKAALREQGKAKAEAVKAVEAKQAEAEQAVHDLQMKLSNVVEEGAP-AGGE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +++ VG+ ++H E+GE+LGL+D R TK+SGARF LTG A L+ + Sbjct: 120 DDFVVLEHVGEPTEFDFEPKDHLELGESLGLIDMKRGTKVSGARFYFLTGDGALLQLGML 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q E G+T + P+LVR E M GTG + AD+++ D +L+ TSEV+L Sbjct: 180 QLAAQ-KAVERGFTLMIPPVLVRPEVMAGTGFLGAHADEIYHLEEDDLYLVGTSEVALAG 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EII+ P+R+ + FR EAGS G+DTRG++R HQF K E+ + E++ + Sbjct: 239 YHSDEIIDLNKGPVRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKLEMFVYCKPEEAQSI 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ +L +++L +++ YRV+ + GDLG SA + YD E W+ QN YRE++S S C Sbjct: 299 HQELLQMEKDMLAAIEVPYRVIDVAGGDLGSSAARKYDTEAWVPTQNTYRELTSTSNCTT 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD + K+ + TLNG+ +A R L+AILEN ADGSV +P L+P++ Sbjct: 359 FQARRLKTRYRDADGKA-QTAATLNGT-LATTRWLVAILENNQQADGSVRVPKALQPFV- 415 Query: 419 NLAVIKKE 426 V++ + Sbjct: 416 GKEVLEPK 423 >gi|169351626|ref|ZP_02868564.1| hypothetical protein CLOSPI_02407 [Clostridium spiroforme DSM 1552] gi|169291848|gb|EDS73981.1| hypothetical protein CLOSPI_02407 [Clostridium spiroforme DSM 1552] Length = 427 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 139/430 (32%), Positives = 220/430 (51%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI +R+NP + +KK+ + + + LD+ R ++ K ++R+ RN S + Sbjct: 1 MIDIAILRENPTLVKENMKKKFQDDKIGLVDEAYKLDKDYREVLTKASELRSMRNRLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EGN + K + + + ++L LE+ E + + LK ++ IPN + VP+G Sbjct: 61 IGQFMREGNKEAAENNKKQVNEMADELKQLEELETKYGNELKDVMMKIPNFIDDSVPLGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H EI E +D D A +++G F L G +A L A Sbjct: 121 DDSENVEITKYGEPVVPDFEIPYHTEIMEKFDGIDMDAAGRVAGQGFYYLMGDVARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T V P ++R + G + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYVIPPYMIRSNVVTGVMSFEEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I++ LP +T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDNILDESKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ + ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDKLWNNTVDLFRSLDIPVRTLECCSGDLADLKAKSIDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + Q+RR+N R K F HTLN + VA R LIA LEN LN DGSV IP LRPY Sbjct: 360 TDAQARRLNIRINGEKGK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPVALRPY 417 Query: 417 MNNLAVIKKE 426 M I + Sbjct: 418 MGGKEKITTK 427 >gi|123968914|ref|YP_001009772.1| seryl-tRNA synthetase [Prochlorococcus marinus str. AS9601] gi|166222764|sp|A2BSA4|SYS_PROMS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123199024|gb|ABM70665.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. AS9601] Length = 425 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 173/422 (40%), Positives = 254/422 (60%), Gaps = 8/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + IR+NP ++ L R + +I L K + + +I +++ S I Q Sbjct: 1 MLDQKLIRENPTSVEENLSLRGKVYKISHIHELTVKKKEIDIEISSLQSESKKLSKLISQ 60 Query: 61 AIAEGNL---SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + ++ LK + + + ++ LE+++ + + I +PN P ++ PIG Sbjct: 61 VIGKSQDNNSQELNDLKKKGNEYRIKISELEEKQRILNKKVDDEIYNLPNFPSKDAPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I++ G P + H+EIGE+L + D ++TK+S +RF L G+ A LERA Sbjct: 121 DESENLQIKTWG-DPLIKENIKSHWEIGESLNIFDSIKSTKISKSRFITLIGNGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSL 236 L FM+D+HT ++GY E+ P LV E++ G+GQ+PKF+ + C+ D WL PT+EV L Sbjct: 180 LINFMLDMHT-KNGYLELMPPALVNSESLTGSGQLPKFSNESFKCSNDDLWLSPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T L+ +E+I+ K LPL++ +P FR EAGS GRDT+G++R HQF K EL S Sbjct: 239 TALHRNELIDPKHLPLKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYWFCDPSKSL 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ + + AE ILK+L+L YR+V +CTGDLGFS+ +T+DLEVWL YREISSCS C Sbjct: 299 EAHKEITTDAESILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSSKCYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + R K + HTLNGSG+A+GR + AILEN DGSV IP L PY Sbjct: 359 LDFQARRSSIR--SKIDKKNTYIHTLNGSGLAIGRTMAAILENGQQTDGSVKIPDALVPY 416 Query: 417 MN 418 Sbjct: 417 FG 418 >gi|190570965|ref|YP_001975323.1| seryl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|238065111|sp|B3CQ06|SYS_WOLPP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|190357237|emb|CAQ54659.1| seryl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 426 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 215/428 (50%), Positives = 295/428 (68%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI+ IR+NP+ + A+K R + E ++ IL +D K R L K++ + +RN + +I Sbjct: 1 MHDIEHIRKNPKGFEKAIKSRGVKEFTAKEILEIDHKKRSLTTKLQALNKQRNEVTEEIK 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N S + + ++ ++ + +E + L ++S +PN+ + VPIG Sbjct: 61 RLK--MNKSPCEEQVKLSKSITSEIETISLKEQTEKNKLVDILSNLPNISAQNVPIGEDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ IR GKK + H+E+GE LGLMDF++A K+SG+RF++L G LA L RAL Sbjct: 119 SSNVEIRKYGKKRKFDFTPKFHYELGERLGLMDFEQAAKISGSRFTILKGQLAKLGRALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 FM++ H +E YTEV P LV++EAMY GQ+PKF+DD + TTD LIPTSEV LTNL Sbjct: 179 NFMLETHVNEFAYTEVYHPALVKNEAMYNVGQLPKFSDDSYLTTDKLRLIPTSEVVLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + +IIE K LP+RFT + FR EAGSAGRDTRGM+RQHQF K ELVSIT E+ S E Sbjct: 239 VADKIIEEKELPIRFTAYSECFRKEAGSAGRDTRGMIRQHQFGKVELVSITTEDQSKDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ERM + AEEILK+L+L YR++ LC+GD+GF+A KTYD+EVWL QN YREISSCS CG F Sbjct: 299 ERMTNAAEEILKKLELPYRIMLLCSGDMGFAAQKTYDIEVWLPEQNKYREISSCSNCGTF 358 Query: 360 QSRRMNSRYR-DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RRMN++Y + + K+ K+ HTLNGS +A+GR ++AI+ENY N+DGSVTIP VL+ YM+ Sbjct: 359 QARRMNTKYFLETDRKTKKYVHTLNGSALAIGRTIVAIMENYQNSDGSVTIPNVLQRYMS 418 Query: 419 NLAVIKKE 426 N VI K+ Sbjct: 419 NDTVISKQ 426 >gi|50364832|ref|YP_053257.1| seryl-tRNA synthetase [Mesoplasma florum L1] gi|67461751|sp|Q6F2A0|SYS_MESFL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|50363388|gb|AAT75373.1| seryl-tRNA synthetase [Mesoplasma florum L1] Length = 422 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 187/425 (44%), Positives = 273/425 (64%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI +I N + L KR + + L+ + + ++K++E+++A +N+ S Q+ Sbjct: 1 MLDINFIESNLVKVKEQLNKRSGDYSLIIDEAVELNVQRKSILKEVENLKANKNNLSKQV 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ + + +K E + + ++ L+ V L + IPN+P + +PIG Sbjct: 61 GELMRNKQSDEANKIKEEVTLINSKIEKLDDSLKLVQEQLTSKLQNIPNIPNDNMPIGND 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+N+ +R G + H + H++I + L L+DF+ KLSG+RF V TG A L R+L Sbjct: 121 DNDNVEVRQWGNELIKKHNT-PHWDIADKLKLVDFEAGPKLSGSRFVVYTGLGAKLVRSL 179 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 +++LHT GYTE++ PLLV +AMYGTGQ+PKF +D + TT+ ++LIPT EV LTN Sbjct: 180 SNILLNLHT-SKGYTEITVPLLVNPQAMYGTGQLPKFKEDAYITTNDQYLIPTGEVPLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L++ EI++ LP+ +TT + FR EAGSAGRDT+G++R HQF K ELV IT +E S E Sbjct: 239 LHAGEILDLNQLPIHYTTYSQCFRQEAGSAGRDTKGLIRLHQFNKVELVKITNQESSEAE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M++ AE +L+ +L YRVV LCTGD+GFS+ KTYDLEVW QN YREISSCS C + Sbjct: 299 LQAMVNDAEAVLQLFNLPYRVVELCTGDVGFSSSKTYDLEVWFPEQNKYREISSCSNCTD 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+R M +RYRD N + +K HTLNGSGVA+ R + AILENY + + + +PT L+PY + Sbjct: 359 FQARNMQTRYRDANGE-VKLAHTLNGSGVAIDRLIAAILENYWDGEKLI-LPTALKPYFD 416 Query: 419 NLAVI 423 N I Sbjct: 417 NKEYI 421 >gi|319950525|ref|ZP_08024436.1| seryl-tRNA synthetase [Dietzia cinnamea P4] gi|319435809|gb|EFV91018.1| seryl-tRNA synthetase [Dietzia cinnamea P4] Length = 420 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 148/427 (34%), Positives = 245/427 (57%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + + R +P + +L+ DE R I + RA + ++ ++G Sbjct: 1 MIDLKLLRENPDLVRDSQRTRGEDPSLVDQLLAADEARRSSIAAADSARAEQKAHGKKVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E +L++A +K+ + EV + + + +EE Sbjct: 61 KASPEERPALLEAAGALKQAVKDAEEAEKAAAAEV-----DRLQRLLSNVVEEGTPAGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ + I +G+ P+ ++H E+GE+LGL+D +R K+SGARF LTG+ A L+ + Sbjct: 116 DDFVEIERIGEIPTFDFEPKDHLELGESLGLLDMERGAKVSGARFYFLTGYGALLQLGML 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q T +G+T + P+LVR E M GTG + + AD+++ D +L+ TSEV+L Sbjct: 176 QLAAQKAT-ANGFTMMIPPVLVRPEIMQGTGFLGQHADEVYRLEDDDLYLVGTSEVALAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI++ + P R+ + FR EAGS G+DTRG++R HQF K E+ S + E++ E Sbjct: 235 YHQGEILDLSAGPKRYCGWSSCFRREAGSHGKDTRGIIRVHQFDKVEMFSWCKPEEAHEE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L +E+L+ + L +RV+ + GDLG SA + YD E W+ Q YRE++S S C Sbjct: 295 HKRLLGFEKEMLEAMGLPFRVIDIAGGDLGSSAARKYDCEAWVPTQGTYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD + + TLNG+ +A R L+AILEN+ ADGSV +P LRP++ Sbjct: 355 FQARRLGVRYRDDEGR-TQTAATLNGT-LATTRWLVAILENHQQADGSVVVPEALRPFV- 411 Query: 419 NLAVIKK 425 V++ Sbjct: 412 GKDVLEP 418 >gi|225011221|ref|ZP_03701680.1| seryl-tRNA synthetase [Flavobacteria bacterium MS024-3C] gi|225004635|gb|EEG42598.1| seryl-tRNA synthetase [Flavobacteria bacterium MS024-3C] Length = 423 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 158/421 (37%), Positives = 236/421 (56%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML IQ IR + + ALKKR ++ P IL D+ R +++ AR N + +I Sbjct: 1 MLQIQAIRAQEDAIITALKKRQIDAAPIVSKILEADQLRRATQTSLDENLARANQLAKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + ALK E++TLKE L+ +V +L+ L+ +PNVP E VP G S Sbjct: 61 GGLFKSGKAAEAQALKEESATLKEASKTLQVTLTQVSETLQDLLYTLPNVPHESVPSGKS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N I G P + H+E+ + L+DF+ K++GA F V G A L+RAL Sbjct: 121 EEDNEEIFRAGDIPILHKDALPHWELAKKYDLIDFELGVKIAGAGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLT 237 + +D +T GYTE+ PL+V + + GTGQ+P M+ + +LIPT+EV +T Sbjct: 181 IAYFLDKNT-AAGYTEIQPPLVVNEASALGTGQLPDKEGQMYYIPEDKLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++ P+++T P FR EAGS G RG+ R HQF K E+V ++ E S+ Sbjct: 240 NIFRDVVLSESDFPVKYTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVQVSHPEVSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ +EIL+ L++ YR++ LC GDLGF+A T+D E++ Q+ + EISS S Sbjct: 300 ALDGMVHHVKEILQELEIPYRILKLCGGDLGFTAALTFDFELFSTAQDRWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R++D KS+ HTLNGS +A+ R L ILEN +G + IP VL+PY Sbjct: 360 TFQANRLKLRFKDAAGKSV-LAHTLNGSALALPRVLAGILENCQTPEG-IKIPKVLQPYT 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|297844038|ref|XP_002889900.1| hypothetical protein ARALYDRAFT_471334 [Arabidopsis lyrata subsp. lyrata] gi|297335742|gb|EFH66159.1| hypothetical protein ARALYDRAFT_471334 [Arabidopsis lyrata subsp. lyrata] Length = 511 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 140/439 (31%), Positives = 232/439 (52%), Gaps = 19/439 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N E ++I +K R+ E +L L E L K++E +R RN+ + + Sbjct: 76 IDFKWIRDNKEAVEINIKNRNSNANLEAVLELYENMVNLQKEVEQLREERNNVAK---KM 132 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S + L E LKE L LE++ ++ L+ + IPN+ +VP+G + Sbjct: 133 KGKLEPSQRETLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHPDVPVGGEDSS 192 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + VG ++H ++G+ L L+DFD A ++SG++F L LE AL + Sbjct: 193 -AIRKEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLLEMALLNW 251 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--GRWLIPTSEVSLTNL 239 + + G+T ++ P +VR + G P+ + + D + LI T+E+ + + Sbjct: 252 TLS-QVMKQGFTPLTTPEIVRSAIVEKCGFQPRGDNTQVYSIDGTDQCLIGTAEIPVGGI 310 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+ LPL++ + FR+EAG+AG T+G+ R HQF K E+ I R EDS + H Sbjct: 311 HMDSILLESVLPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFNKAEMFVICRPEDSESFH 370 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + ++ E++ L LH++ + + T DLG A + +D+E W+ G + EISS S C ++ Sbjct: 371 QELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDVEAWMPGLGRFGEISSASNCTDY 430 Query: 360 QSRRMNSRYR--------DPNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 QSRR+ RYR K + KF HTLN + A+ R ++ +LENY DG+V Sbjct: 431 QSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAIPRMMVCLLENYQQEDGAV 490 Query: 408 TIPTVLRPYMNNLAVIKKE 426 IP LRP+M + +IK + Sbjct: 491 VIPEPLRPFMGGIELIKPK 509 >gi|213019481|ref|ZP_03335287.1| seryl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994903|gb|EEB55545.1| seryl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 433 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 215/428 (50%), Positives = 295/428 (68%), Gaps = 4/428 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI+ IR+NP+ + A+K R + E ++ IL +D K R L K++ + +RN + +I Sbjct: 8 MHDIEHIRKNPKGFEKAIKSRGVKEFTAKEILEIDHKKRSLTTKLQALNKQRNEVTEEIK 67 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N S + + ++ ++ + +E + L ++S +PN+ + VPIG Sbjct: 68 RLK--MNKSPCEEQVKLSKSITSEIETISLKEQTEKNKLVDILSNLPNISAQNVPIGEDE 125 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ IR GKK + H+E+GE LGLMDF++A K+SG+RF++L G LA L RAL Sbjct: 126 SSNVEIRKYGKKRKFDFTPKFHYELGERLGLMDFEQAAKISGSRFTILKGQLAKLGRALI 185 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 FM++ H +E YTEV P LV++EAMY GQ+PKF+DD + TTD LIPTSEV LTNL Sbjct: 186 NFMLETHVNEFAYTEVYHPALVKNEAMYNVGQLPKFSDDSYLTTDKLRLIPTSEVVLTNL 245 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + +IIE K LP+RFT + FR EAGSAGRDTRGM+RQHQF K ELVSIT E+ S E Sbjct: 246 VADKIIEEKELPIRFTAYSECFRKEAGSAGRDTRGMIRQHQFGKVELVSITTEDQSKDEL 305 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ERM + AEEILK+L+L YR++ LC+GD+GF+A KTYD+EVWL QN YREISSCS CG F Sbjct: 306 ERMTNAAEEILKKLELPYRIMLLCSGDMGFAAQKTYDIEVWLPEQNKYREISSCSNCGTF 365 Query: 360 QSRRMNSRYR-DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RRMN++Y + + K+ K+ HTLNGS +A+GR ++AI+ENY N+DGSVTIP VL+ YM+ Sbjct: 366 QARRMNTKYFLETDRKTKKYVHTLNGSALAIGRTIVAIMENYQNSDGSVTIPNVLQRYMS 425 Query: 419 NLAVIKKE 426 N VI K+ Sbjct: 426 NDTVISKQ 433 >gi|332291633|ref|YP_004430242.1| seryl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332169719|gb|AEE18974.1| seryl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 423 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 156/421 (37%), Positives = 237/421 (56%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML++ IR+N E AL KR+++ + +++ D+ R +++++ A N S +I Sbjct: 1 MLEVAHIRENKEAFAKALSKRNIDAATLLDQVVAADDLRRSSQAQLDEVLADSNKFSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + LK +T+ LKEQ L+++ + L+ L+ IPN+P + VP G S Sbjct: 61 GMLFKSGEAQKANILKEKTAGLKEQSKTLQEQLNTASEDLQNLLYQIPNIPHDSVPEGNS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N I G P ++ H+E+ + ++DF+ TK++GA F V G A L+RAL Sbjct: 121 DEDNEEIFRKGDIPELHEAAQPHWELAKKYDIIDFELGTKIAGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 + +D +T E GYTE P LV + + +GTGQ+P M+ T D +LIPT+EV +T Sbjct: 181 IAYFLDKNT-EAGYTEYQVPHLVNEASGFGTGQLPDKEGQMYHVTEDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++ LP+ T P FR EAGS G RG+ R HQF K E+V I R EDS Sbjct: 240 NMFRGDLRNHNELPITCTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIERPEDSAA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + IL L++ YR++ LC GDLGF+A TYD E++ Q+ + EISS S Sbjct: 300 ALDGMVDHVKTILDELEMPYRILRLCGGDLGFTAHLTYDFELFSTAQDRWLEISSVSNFL 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R++D + ++ K HTLNGS +A+ R L ILEN +G + IP L PY Sbjct: 360 TFQANRLKLRFKDEDGQN-KLAHTLNGSSLALPRVLAGILENCQTPEG-IKIPKALIPYC 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|253827922|ref|ZP_04870807.1| Seryl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253511328|gb|EES89987.1| Seryl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 430 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 183/433 (42%), Positives = 266/433 (61%), Gaps = 20/433 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + + E + L KR+++ E + + +E+++A++NS + Sbjct: 1 MIDLKLLVNDFEGVVAQLTKRNIDEVFLETLRQTHLNYKQKKIALEELQAKQNSKTKLFA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q EG + LK E LK ++ + +E L++ IPN+P + PIG Sbjct: 61 QYKQEGK--DIQPLKKECDLLKAEITLYTQEIQGWEEKLQEFSHIIPNIPDSKTPIGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ I+ + +EH+E+ E G +DF+R KL+ +RFSV G A LERAL Sbjct: 119 KDNVEIKKILTPREFSFTPKEHWELAEQNGWIDFERGVKLAKSRFSVFMGMAAKLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------------D 224 +M+D +T + G++EV P++V + ++GTGQ+PKF +D+F + Sbjct: 179 NYMLDFNT-QRGFSEVGTPVIVNSQILFGTGQLPKFENDLFKISDFEEEELDSKEAKKGH 237 Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 +LIPT+EV+LTNLY++EI++ + LPL T P FR EAGSAGRDTRG++RQHQF K Sbjct: 238 ELYLIPTAEVTLTNLYNNEILKEEDLPLMMTAYTPCFRKEAGSAGRDTRGIIRQHQFDKV 297 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 ELV+IT +DS ERM++CA ++L L L +R+V LC+GDLGFSA T D+EVWL GQ Sbjct: 298 ELVAITTPQDSDIMQERMVACASDLLTSLGLPHRLVQLCSGDLGFSASNTIDIEVWLPGQ 357 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 N YREISS S +FQ+RR RY+D N K+L HTLNGS +AVGR L+AI+ENY N D Sbjct: 358 NCYREISSISNTRDFQARRAKIRYKDSNKKNL-LVHTLNGSSLAVGRTLVAIMENYQNED 416 Query: 405 GSVTIPTVLRPYM 417 GS+ IP VL+PY+ Sbjct: 417 GSIEIPNVLQPYL 429 >gi|168181449|ref|ZP_02616113.1| serine--tRNA ligase [Clostridium botulinum Bf] gi|237793839|ref|YP_002861391.1| seryl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|182675284|gb|EDT87245.1| serine--tRNA ligase [Clostridium botulinum Bf] gi|229263567|gb|ACQ54600.1| serine--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 425 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 147/428 (34%), Positives = 226/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++K+ + +++LD + R + + +++RA+RN S Q Sbjct: 1 MLDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDTELRNIKPEADNLRAKRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + + + L LEK E E+ +KK++ IPN+ VPIG Sbjct: 61 IGGLMAQGKKEEAEELKKQVTAASDHLAELEKRESELEEKIKKIMITIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEIQRYGEPVVPDFEIPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++R E + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-NRGFTYCIPPFMIRSEVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + I SLP T+ +P FR E G+ G + RG+ R HQF K E++ + R EDS Sbjct: 240 IGKFINTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCRPEDSV 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYDKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N K F HTLN + VA R LIA LEN LNADGSV IP L+PY Sbjct: 360 GDAQARRLKIRVAGENGK--YFAHTLNNTVVAPPRMLIAFLENNLNADGSVNIPVPLQPY 417 Query: 417 MNNLAVIK 424 M + +IK Sbjct: 418 MGGMTIIK 425 >gi|16329819|ref|NP_440547.1| seryl-tRNA synthetase [Synechocystis sp. PCC 6803] gi|2501054|sp|P73201|SYS_SYNY3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|1652304|dbj|BAA17227.1| seryl-tRNA synthetase [Synechocystis sp. PCC 6803] Length = 430 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 183/426 (42%), Positives = 261/426 (61%), Gaps = 10/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ IR+NP + L +R E IL++ + + + +++R N I Sbjct: 1 MLDLKQIRENPTAIQNRLNQRGGGASYDLEPILAIAAEQKAKESERTVLQSRSNEIGKLI 60 Query: 59 GQAIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 GQ I +G + L+ E ++LK QL LE +E ++ L+KL+ +PN+P E PI Sbjct: 61 GQKIGQGADPKGEEIQTLREEGNSLKIQLADLEPQEKDLKEQLQKLLLELPNLPCETTPI 120 Query: 116 GTSANENILIRSV--GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 G S +NI ++ + H+EIGE LG++D +R K++ +RF L A Sbjct: 121 GASEADNIEVKRWGDQYLKAETVGILPHWEIGEKLGIIDSERGVKVAQSRFISLMKAGAA 180 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTS 232 LERAL FM++ H GY E+ P+LV +++ GTGQ+PKFA++ F D WLIPT+ Sbjct: 181 LERALINFMLERHIGV-GYQEIMPPILVNSDSLLGTGQLPKFAEESFQCRGDDLWLIPTA 239 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNLY E+++ + LP++ P FR EAGS GRDT+G++R HQF K ELV + + Sbjct: 240 EVPVTNLYRDEVLDLEQLPIKHCAYTPCFRREAGSYGRDTKGLIRLHQFNKVELVKLVKP 299 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S EH+ +++ AE IL+ L+L YRVV LCTGDLGF A K YDLEVWL N YREISS Sbjct: 300 EESAAEHQALVADAEAILQALELPYRVVELCTGDLGFGAAKCYDLEVWLPSANTYREISS 359 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA-DGSVTIPT 411 CS +FQ+RR N RY++ K +F HTLNGSG+A+GR + AILENY G V +P Sbjct: 360 CSNFHDFQARRANIRYKEKGKKGTQFVHTLNGSGLAIGRTMAAILENYYEPSSGQVKVPV 419 Query: 412 VLRPYM 417 VL+ ++ Sbjct: 420 VLQDFL 425 >gi|288919017|ref|ZP_06413358.1| seryl-tRNA synthetase [Frankia sp. EUN1f] gi|288349557|gb|EFC83793.1| seryl-tRNA synthetase [Frankia sp. EUN1f] Length = 420 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 153/426 (35%), Positives = 238/426 (55%), Gaps = 9/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR NP+ + A++ + ++ + +L+LD++NR L ++++ +ARR S + Q + Sbjct: 1 MLDKRFIRDNPDAVKDAVRLKGVDLDVDELLALDQENRKLQFEVDEAQARRKSFAKQFAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L+ E QL L + + + L +L+ P +P E P+G + Sbjct: 61 A----DEARRAELRAEHVEFDRQLQDLRERLAQTSARLSELMLLAPGIPWEGAPVGPDES 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++IR+VG +P +H E+ E G +F RA +++G R L G + LERA+ Sbjct: 117 ANVVIRTVGTRPEFDFPPLDHTELAEKRGWAEFARARRVAGERAYALVGDMVMLERAVHS 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNL 239 + +DL E +T V+ P LV++ + GTG PK D+++ +L T+EV+L L Sbjct: 177 YALDL-LRERDFTPVAVPALVKEAPLVGTGMFPKGRDEIYEIPADDAFLAGTAEVALVGL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV--SITREEDSFT 297 +S EI+++ LP+R+ ++P FR E GSA RD RG+LR HQF K E + +S Sbjct: 236 HSGEILDAGQLPIRYAGISPCFRREIGSASRDVRGLLRVHQFEKVEQFVLCVNDPAESAR 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H +L+ AE IL L LHY VV TGD+G + D+ W + +RE SCST Sbjct: 296 WHAELLATAERILTDLGLHYEVVECATGDMGLGKFRMNDINTWFPTLDRFRETHSCSTLH 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RYRD + F HTLN + VA R L AILEN+ AD V +P VLRPY+ Sbjct: 356 DWQARRANLRYRDSGGN-IHFAHTLNNTAVATPRLLAAILENFQTADQQVRVPEVLRPYL 414 Query: 418 NNLAVI 423 ++ Sbjct: 415 GGRDLL 420 >gi|300774202|ref|ZP_07084069.1| serine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] gi|300758881|gb|EFK55710.1| serine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] Length = 423 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 148/426 (34%), Positives = 233/426 (54%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + +IR+N + + L ++ + + I+SLDE R + + + A N+ + QI Sbjct: 1 MLQLNYIRENRDKVIERLGVKNFKELGLVDEIISLDELRRKTQSESDSLSAEANAAAKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + +G + +K+ +S KEQ+ L ++ EV L I +PN+P VP G + Sbjct: 61 GDLMRQGKKEEAETVKSLSSGYKEQVKQLTEKLSEVEQELHNKIVQLPNLPHSSVPAGVT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N +I + G PS + H+E+ ++DF+ TK++GA F V G A L+RAL Sbjct: 121 AEDNEVIYTAGDVPSLDEDALPHWELAAKYDIIDFELGTKVAGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 F +D GY EV P++V + + +GTGQ+P M+ D +LIPT+EV +T Sbjct: 181 INFFLDQAAEV-GYKEVQVPIVVNEASGFGTGQLPDKEGQMYHVGQDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y I++++ P+R P FR EAGS G RG+ R HQF K E V I + S+ Sbjct: 240 NMYRDVIVKAEDFPIRHCAYTPCFRREAGSYGAHVRGLNRLHQFDKVEAVQIVHPDQSYA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M + +L++L+L YRV+ LC GD+ F+A TYDLEV+ Q + E+SS S Sbjct: 300 VIEEMCKYVQGLLEKLELPYRVLRLCGGDMSFTAALTYDLEVYSTAQKRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +Q+ R+ R+++ K ++ HTLNGS +A+ R + ++LEN G + +P L PY Sbjct: 360 TYQANRLKVRFKNEEGK-MQLAHTLNGSALALPRIVASLLENNQTGKG-IKVPAALVPYT 417 Query: 418 NNLAVI 423 I Sbjct: 418 -GFEYI 422 >gi|257460194|ref|ZP_05625298.1| seryl-tRNA synthetase [Campylobacter gracilis RM3268] gi|257442635|gb|EEV17774.1| seryl-tRNA synthetase [Campylobacter gracilis RM3268] Length = 416 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 191/421 (45%), Positives = 275/421 (65%), Gaps = 9/421 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M++++ I N + + L + + PQ + +L + + ++E+++A +N+ S ++G Sbjct: 1 MINLKLIETNFDEFNKKLIAKKVPPQTLQTLLDAYNELKSKKTELENLQAVQNAKSKELG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A EG V ALK++ K+++ L + +E SL+ + +C+PN+ ++VPIG + Sbjct: 61 LAAREGK--DVGALKSQLEENKQKIQSLSELVNEREQSLEAIAACVPNIIDDDVPIGANE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+ I+ V + ++HF++GEALG +DF+R KLSG+RF+ + G A L AL Sbjct: 119 NENVCIKKVLDPRTFDFAPKQHFDLGEALGWLDFERGVKLSGSRFTAIRGLGAKLNMALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 +MI+ + + G+ V+ P LVRD+ +YGTGQ+PKF DD++ +LIPTSEV+ Sbjct: 179 NYMIEFN-NSRGFELVNMPFLVRDQILYGTGQLPKFKDDLYHVDDEEQNLYLIPTSEVTA 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL+S EI+ S+ LP++ T+ + FR EAGSAGRDTRGM+RQHQF K ELV+ITR EDS Sbjct: 238 TNLFSDEILRSEELPIKLTSYSHCFRKEAGSAGRDTRGMIRQHQFEKVELVAITRPEDSA 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E M+SCA ++L L L +R + LC+GDLGFSA KT DLEVWL GQN YREISS S C Sbjct: 298 KMLEEMISCASDLLASLGLPHRHMLLCSGDLGFSAAKTVDLEVWLPGQNQYREISSISNC 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR R++D K HTLNGS +AVGR LIA++ENY DGS+ IP VL Y Sbjct: 358 RDFQARRAKIRFKD--GKKNSLVHTLNGSSLAVGRTLIAVMENYQRKDGSIEIPHVLEKY 415 Query: 417 M 417 M Sbjct: 416 M 416 >gi|86134826|ref|ZP_01053408.1| Seryl-tRNA synthetase [Polaribacter sp. MED152] gi|85821689|gb|EAQ42836.1| Seryl-tRNA synthetase [Polaribacter sp. MED152] Length = 424 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 153/422 (36%), Positives = 229/422 (54%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML +Q+IR+N + L KR+ E E +L+ DE R ++++ A N S + Sbjct: 1 MLQVQFIRENKTKVLEGLAKRNFANAETLIEQVLTADENRRATQVELDNTLAESNKLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG G + LK +T LKE L ++ + L +L+ IPNVP V G+ Sbjct: 61 IGNLYKTGKAQEANVLKEKTGQLKESSKELSEKLSQFSDELDQLLYQIPNVPHASVKAGS 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N I S G P+ + H+E+ + ++DF+ TK+SGA F V G A L+RA Sbjct: 121 SEEDNENIFSEGTIPNLGDHALPHWELAKKYDIIDFELGTKISGAGFPVYKGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + +D +T GY EV P LV + TGQ+P M+ T D +LIPT+EV + Sbjct: 181 LINYFLDKNT-AAGYKEVQVPHLVNTASATATGQLPDKDGQMYHSTVDDLYLIPTAEVPI 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ ++++ P+ T P FR EAGS G RG+ R HQF K E+V + E+S+ Sbjct: 240 TNMFRGDLVQESDFPIALTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRVEHPENSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + M+ + IL+ L L YR++ LC GD GF++ T+D E++ Q+ + EISS S Sbjct: 300 KALDGMVEHIKNILRELKLPYRILRLCGGDTGFTSALTFDFELFSTAQDRWLEISSASNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+ R+ R+++ KS + HTLNGS +A+ R L ILENY +G + +P VL PY Sbjct: 360 ETFQANRLKLRFKNKEGKS-ELAHTLNGSSLALPRVLAGILENYQTENG-IQVPEVLIPY 417 Query: 417 MN 418 Sbjct: 418 TG 419 >gi|224418974|ref|ZP_03656980.1| seryl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 442 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 183/433 (42%), Positives = 266/433 (61%), Gaps = 20/433 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + + E + L KR+++ E + + +E+++A++NS + Sbjct: 13 MIDLKLLVNDFEGVVAQLTKRNIDEVFLETLRQTHLNYKQKKIALEELQAKQNSKTKLFA 72 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q EG + LK E LK ++ + +E L++ IPN+P + PIG Sbjct: 73 QYKQEGK--DIQPLKKECDLLKAEITLYTQEIQGWEEKLQEFSHIIPNIPDSKTPIGKDE 130 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ I+ + +EH+E+ E G +DF+R KL+ +RFSV G A LERAL Sbjct: 131 KDNVEIKKILTPREFSFTPKEHWELAEQNGWIDFERGVKLAKSRFSVFMGMAAKLERALI 190 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------------D 224 +M+D +T + G++EV P++V + ++GTGQ+PKF +D+F + Sbjct: 191 NYMLDFNT-QRGFSEVGTPVIVNSQILFGTGQLPKFENDLFKISDFEEEELDSKEAKKGH 249 Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 +LIPT+EV+LTNLY++EI++ + LPL T P FR EAGSAGRDTRG++RQHQF K Sbjct: 250 ELYLIPTAEVTLTNLYNNEILKEEDLPLMMTAYTPCFRKEAGSAGRDTRGIIRQHQFDKV 309 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 ELV+IT +DS ERM++CA ++L L L +R+V LC+GDLGFSA T D+EVWL GQ Sbjct: 310 ELVAITTPQDSDIMQERMVACASDLLTSLGLPHRLVQLCSGDLGFSASNTIDIEVWLPGQ 369 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 N YREISS S +FQ+RR RY+D N K+L HTLNGS +AVGR L+AI+ENY N D Sbjct: 370 NCYREISSISNTRDFQARRAKIRYKDSNKKNL-LVHTLNGSSLAVGRTLVAIMENYQNED 428 Query: 405 GSVTIPTVLRPYM 417 GS+ IP VL+PY+ Sbjct: 429 GSIEIPNVLQPYL 441 >gi|299144267|ref|ZP_07037347.1| serine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518752|gb|EFI42491.1| serine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 428 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 137/428 (32%), Positives = 220/428 (51%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NPE + +KK+ + P + ++ LDE+ R + K +++R+RRN S + Sbjct: 1 MLDIKFLRANPEVVKENIKKKFQDEKLPLVDEVIELDEQLRAVKTKGDELRSRRNYVSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + + + + K E + ++L LE EE E+ L + + IP + + VPIG Sbjct: 61 IGAFMQKKEIEKANEAKIEVKNINDELEKLEAEEKELDRELTQRMMIIPQIIDKSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ + H +I E +D D A + SG F L G +A L A Sbjct: 121 DDSENVEIEKFGEPVVPEYEVPYHIDIMEKFDGVDLDAARRTSGNGFYYLRGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + + G + + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DRGFTYYIPPFMIRSDVVTGVMSFAEMENMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + I +PL T+ +P FR E G+ G + RG+ R HQF K E+V I + EDS Sbjct: 240 IGKFINTITPENDMPLTMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVVICKPEDSP 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++ + + L++ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 YWFDQLWKNTVDFFRSLEIPVRTLECCSGDLADLKVKSLDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+N + + + HTLN + VA R LIA LEN L DGS+ IP L+PY Sbjct: 360 GDAQARRLNIKLKGEDGN--YLAHTLNNTVVAPPRMLIAFLENLLQEDGSIRIPEPLQPY 417 Query: 417 MNNLAVIK 424 M I+ Sbjct: 418 MGGKEKIE 425 >gi|309812922|ref|ZP_07706650.1| serine--tRNA ligase [Dermacoccus sp. Ellin185] gi|308432994|gb|EFP56898.1| serine--tRNA ligase [Dermacoccus sp. Ellin185] Length = 437 Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats. Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 23/441 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ +R NP+ + + + R + + IL LD R + + E +RA + S +G Sbjct: 1 MIDIRLLRDNPDAVRASQRARGADEGVVDRILELDATRRSSLGEFERVRAEQKQVSKSVG 60 Query: 60 -------QAIAEGNLSLVDALKNET-------STLKEQLPILEKEEHEVCSSLKKLISCI 105 +A G+ S V L+ E +TL ++ LE E L+ + Sbjct: 61 AAMGALNKAKKGGDDSEVARLQAEADAARENAATLSARVKELEATADEAGKEFDALLRTV 120 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 PNV L+ VP ++ + +++VG+ P+ ++H EIGE +G +D +R TK+SG+RF Sbjct: 121 PNVVLDGVP-AGGEDDFVTVKTVGEAPTFDFEPKDHLEIGELIGAIDMERGTKVSGSRFY 179 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-- 223 L G A LE AL Q +D + +T + P LVR E M GTG +++ Sbjct: 180 FLKGVGARLELALLQMALD-QAIANDFTPMITPTLVRPETMQGTGFDVAHDAEIYRVQEE 238 Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 D +L+ TSEV+L ++ EI+ P+R+ + +R EAGS G+DTRG++R HQF K Sbjct: 239 DNLYLVGTSEVALAGYHADEILN-VDAPVRYAGWSSCYRREAGSYGKDTRGIIRVHQFNK 297 Query: 284 CELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAG 343 E+ S R ED+ EH RML+ EE+L + +L YRV+ GDLG SA + +D E W+ Sbjct: 298 VEMFSYCRIEDAEAEHARMLAWEEEMLAKCELSYRVIDTAAGDLGTSAARKFDCEAWVPT 357 Query: 344 QNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 Q YRE++S S C FQ+RR+N R R + + TLNG+ +A R L+AILE + A Sbjct: 358 QGTYRELTSTSNCTTFQARRLNIRERT--DGATRSVATLNGT-LATTRWLVAILETHQQA 414 Query: 404 DGSVTIPTVLRPYMNNLAVIK 424 DGSV +P LR YM L V+ Sbjct: 415 DGSVRVPEALRTYMGGLEVLP 435 >gi|67459641|ref|YP_247265.1| seryl-tRNA synthetase [Rickettsia felis URRWXCal2] gi|75535963|sp|Q4UK35|SYS_RICFE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67005174|gb|AAY62100.1| Seryl-tRNA synthetase [Rickettsia felis URRWXCal2] Length = 425 Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats. Identities = 208/424 (49%), Positives = 282/424 (66%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L +R +EP S I LD + R + I++ + R S +G Sbjct: 1 MLNIKWIRENQELFDEKLSQRFIEPMSSKIAMLDGEKRKITCLIQEFQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A + + L+ + + E+L LE++ + + L +PN+P EEVP G + Sbjct: 61 -MASKSGEEFEGLQRDVKHINEKLEELEQDLNNNNELNELLNM-LPNIPDEEVPYGMDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+R+ G + + L+++HFE+G L LMDF++ K+SGARF L G LA LERAL Sbjct: 119 MNKLVRTYG-ETNPNALNKQHFELGTKLNLMDFEQTAKISGARFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT E + E+S P+LVRD AMY GQ+PKFA++ F TT+G LIPT+EVSL N+ Sbjct: 178 FMIDVHTKEFDFFEISPPVLVRDNAMYNAGQLPKFAEESFATTNGYRLIPTAEVSLVNIV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R+ P FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 238 ADTIIPREKLPMRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTTEESKNEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E IL++L+L YRV+ LCTGD+GF+A KTYD+EVWL GQ YREI+SCS CG+FQ Sbjct: 298 YITNASETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNEDGSITIPDVLINYMGGL 417 Query: 421 AVIK 424 I Sbjct: 418 QKIT 421 >gi|94985040|ref|YP_604404.1| seryl-tRNA synthetase [Deinococcus geothermalis DSM 11300] gi|166219870|sp|Q1IZU9|SYS_DEIGD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|94555321|gb|ABF45235.1| seryl-tRNA synthetase [Deinococcus geothermalis DSM 11300] Length = 437 Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats. Identities = 148/426 (34%), Positives = 236/426 (55%), Gaps = 9/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR++P + A+ + + + +L +D + L +++E ++ RN+N+ + + Sbjct: 1 MLDLKFIREHPGTVKHAIAVKGVNLDLDELLRIDRELVELRQRVEALQTERNANAKLVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E L + L E + LE + L++L+ +PN+P VP+G + Sbjct: 61 ATPEERP----HLIQKGKDLAEDIKALEPQLRAHEDQLRQLLLRVPNIPHPSVPVGQDDS 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G+ P +H E+ E G D +R ++SG+R +L G LE A+ Sbjct: 117 ENVELRREGQLPEFAFPPLDHVELLERQGWSDPERVARVSGSRSYLLKGDAVLLEMAVLM 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 F +D G T +S LVR E + G+G P D ++ D L T+EV + +L Sbjct: 177 FALDF-LRGRGLTPLSTTALVRPETLVGSGHFPGGEDQVYKIEGDELMLAGTAEVPVNSL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF--T 297 Y+ E + + LPL F ++ +FRSEAGSAGRD RG++R H+F K E +TR +++ Sbjct: 236 YAGEQLSYEELPLAFAAISAAFRSEAGSAGRDVRGLIRVHEFRKVEQYVMTRADEAEALR 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +L AE +L+ L+L YRVV CTGD+G YD+E W+ + YRE SCS G Sbjct: 296 WFGAILENAEGLLRALELPYRVVQNCTGDMGAGKVLMYDIETWVPSEGKYRETHSCSYLG 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR RYRD + K L + HTLN +G+A R L+ +LEN+ ADG++ +P LRPY+ Sbjct: 356 DWQARRTGLRYRDEHGK-LVYAHTLNNTGIATPRILVPLLENHQQADGTIRVPEALRPYL 414 Query: 418 NNLAVI 423 V+ Sbjct: 415 GGREVL 420 >gi|325851996|ref|ZP_08171079.1| serine--tRNA ligase [Prevotella denticola CRIS 18C-A] gi|325484552|gb|EGC87468.1| serine--tRNA ligase [Prevotella denticola CRIS 18C-A] Length = 429 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 147/422 (34%), Positives = 239/422 (56%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+ E +L D R +K++ + ++N S Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFVGAREAVEKVLEYDRLRRETQQKLDTNKQKQNQLSRQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG D++K E + LK L++ + + ++ IPNVP ++VP G Sbjct: 61 IGGLMKEGRKDEADSIKEEVAQLKSADKALQEIMDKAQKDMTDVLLTIPNVPNDDVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N++++ G+KP ++ H+++ + L+DFD K++GA F + G +A +RA Sbjct: 121 DASDNVVVKEGGRKPDLPADAQCHWDLLKKFNLVDFDLGVKITGAGFPLYIGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY EV PL+V ++ GTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPLVVNQDSGLGTGQLPDKEGQMYHANLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI++ + LP++ + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 TNIFRDEILDEQDLPVKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ML E +LK+L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 ASLNEMLEHVEGLLKKLELPYHILRLCGGDMSFTSAICYDFEVWSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R++ RYR + K ++ HTLNGS +A+ R + AI+EN +G + +P VL PY Sbjct: 360 ESYQANRLHCRYRHADDKKIELCHTLNGSALALPRIVAAIIENNQTPEG-IRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|325282734|ref|YP_004255275.1| Seryl-tRNA synthetase [Deinococcus proteolyticus MRP] gi|324314543|gb|ADY25658.1| Seryl-tRNA synthetase [Deinococcus proteolyticus MRP] Length = 423 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 155/424 (36%), Positives = 237/424 (55%), Gaps = 7/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI++IR+NP+ + A+ + + + +L+ D L +++E ++A RN+N+ + + Sbjct: 1 MQDIRFIRENPDTVRKAIADKFVSLDLDAVLAADRAVLELRQQVETLQAERNANAKLVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A AE + L + L QL LE + E +L+ L+ +PNVP P+G S + Sbjct: 61 ASAEERPA----LIEKGKALGAQLAELEPQLREQEEALRSLLLRVPNVPHGSAPVGPSDD 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ P+ +H ++ E G D +R ++SG+R +L G A LE A+ Sbjct: 117 DNVELRREGQLPTFKFQPLDHVDLLELQGWSDPERVARVSGSRSYLLKGEAARLEMAILT 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 F +D +E G +S LVR E + TG P D ++ + L TSEV + +L Sbjct: 177 FALDF-LAERGLEMLSTTALVRPETLTATGHFPGGEDQVYRLEDEELMLAGTSEVPINSL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ EI+ LPL F + +FRSEAGSAGRD RG++R H+F K E I R ED Sbjct: 236 YAGEILAESDLPLAFAGFSAAFRSEAGSAGRDVRGLIRVHEFRKVEQYVICRPEDGMAWF 295 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++L+ AE IL+ L+L YRVV TGD+G D+E W+ + YRE SCS ++ Sbjct: 296 EKLLANAEGILQALELPYRVVQNSTGDMGLGKHLMMDIETWVPSEEKYRETHSCSYLTDW 355 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR R++ + K +F HTLN +G+A R L+ LEN+ ADG+V IP L+PY+ Sbjct: 356 QARRTGLRFKGADGK-PQFAHTLNNTGIASPRILVPFLENHQQADGTVRIPAALQPYLGG 414 Query: 420 LAVI 423 AVI Sbjct: 415 KAVI 418 >gi|313836482|gb|EFS74196.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA2] gi|314928937|gb|EFS92768.1| seryl-tRNA synthetase [Propionibacterium acnes HL044PA1] gi|314971072|gb|EFT15170.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA3] gi|328906615|gb|EGG26390.1| serine--tRNA ligase [Propionibacterium sp. P08] Length = 424 Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats. Identities = 147/429 (34%), Positives = 236/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + + R +P + +++ DE R I E++RA + +I Sbjct: 1 MIDPKLLRTDPDTVRRSQVARGEDPSIVDNVVAADEARREAIAAHENLRAEQKGLGKRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GT 117 +A + L T T+ ++ L+K E + +L + N+ ++ VP Sbjct: 61 KASGDEKAE----LLTRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGED 116 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 I + + ++H EIGEALG +D +R TK+SG+RF VLTG A LE A Sbjct: 117 EGAIKETIGTPRDFAAEGFKPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + + G+T + P LV+ AM GTG + + ADD++ D ++L+ TSEV+L Sbjct: 177 LLNLAMSKAA-QWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P +R EAGS G+DTRG+ R H F K E+ E++ Sbjct: 236 AAFHSEEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPEEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS ++ + L++ ++V+ + +GDLG SA + YD WL QN YREI+S S C Sbjct: 296 AWHEKLLSFEKDFITALEIPFQVLDVASGDLGLSAARKYDCYGWLPTQNRYREITSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR++ R+R P+ ++ TLNG+ A+ R +I +LEN+ ADGSV +P LRPY Sbjct: 356 TTFQARRLSIRHRGPDG--VEPLATLNGTLCAMTRIIIMLLENHQQADGSVRVPKALRPY 413 Query: 417 MNNLAVIKK 425 + I+ Sbjct: 414 LGGRGFIEP 422 >gi|206895979|ref|YP_002247035.1| seryl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] gi|238065095|sp|B5Y8D8|SYS_COPPD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|206738596|gb|ACI17674.1| seryl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 418 Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats. Identities = 172/419 (41%), Positives = 259/419 (61%), Gaps = 5/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M ++++R+N + AL+KR + + +L++DE+ R + ++++ RRN ++ + Sbjct: 1 MYTLRFVRENENLMREALRKRQYDESIVDQLLAVDEQRRKEVTSLQELNTRRNELTSVVS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +G + LKE++ + E E+ S +++++ +PN+P E VP G + Sbjct: 61 KKKKDG--TDASQEIELLKKLKEEVSVKETIVSELESKIQEILKQLPNIPHESVPTGKDS 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G+ + + H+EIGE + ++DF RA K+SG+RF G A LE L Sbjct: 119 SENVEVRRWGEPRTFAFEPKPHWEIGENMNILDFQRAAKISGSRFVAYQGLGALLELTLI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+ H +HGYT V P LV+ + +GTG +PKF D+M+ D +LIPT+E+ + Sbjct: 179 NFMVWTHVKDHGYTFVIPPYLVKSDTAFGTGHLPKFKDEMYYCPEDDLYLIPTAELPMVA 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S E++ LP R+ + FR EAG+AGRDTRG++R+HQF K EL+ IT+ EDS+ E Sbjct: 239 YHSGEVLVEAELPKRYVAYSACFRREAGAAGRDTRGLIRRHQFNKVELIKITKPEDSYNE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M+S AE IL+ L+L YRVV LCTGD+GF+A KTYD+EVW+ Y EISSCS Sbjct: 299 LESMVSDAESILQLLELPYRVVLLCTGDMGFAAAKTYDIEVWMPSYGRYVEISSCSNTEG 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR N R R P+ + + H LNGSG+AVGR L AI+ENY DG+ IP LR +M Sbjct: 359 FQARRANVRMRRPDGSN-DYPHMLNGSGLAVGRTLAAIMENYQREDGTFDIPQALRAFM 416 >gi|271961743|ref|YP_003335939.1| serine--tRNA ligase [Streptosporangium roseum DSM 43021] gi|270504918|gb|ACZ83196.1| Serine--tRNA ligase [Streptosporangium roseum DSM 43021] Length = 420 Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats. Identities = 157/427 (36%), Positives = 244/427 (57%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ L + + R + E +L LD + R + + E +RA + S + Sbjct: 1 MIDLRTLREDPDRLRASQRARGEDDSVVETLLDLDSRRRGALSRFETLRAEQKSIGKTVS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + AL + L Q+ E E ++ L L+ +PN+ E P Sbjct: 61 RASGDEK----AALLDRAKDLAAQVKSAESEAEKLAGELDNLLYTVPNLVEEGAP-AGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +LI VG+KPS ++H E+GE LG +D +R K+SG+RF L G A L+ L Sbjct: 116 DDFVLIEEVGEKPSFDFEPKDHLELGELLGAIDMERGAKVSGSRFFFLRGVGARLQLGLL 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 + E G+ + P+LV+ E+M GTG + + A +++ D +L+ TSEV + Sbjct: 176 NMAMQ-QAIEAGFIPMIPPVLVKPESMKGTGFLGEHASEVYHLPEDDLFLVGTSEVPMAA 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ SLP R+ + FR EAGS G+DTRG++R HQF K E+ S TR ED+ E Sbjct: 235 YHADEILDGGSLPYRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFSYTRPEDAHEE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L +E+L +++L YRV+ + GDLG SA + +D E WL Q YRE++S S C Sbjct: 295 HLRLLDWEKEMLAKVELPYRVIDIAGGDLGVSAARKFDCEAWLPTQGQYREVTSTSNCTG 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD + K + TLNG+ +A R + AILEN+ ADGSV +P LRPY+ Sbjct: 355 FQARRLAVRYRDKDGK-PQHVATLNGT-LATTRWIAAILENHQQADGSVVVPKALRPYV- 411 Query: 419 NLAVIKK 425 L V++ Sbjct: 412 GLDVLEP 418 >gi|228473450|ref|ZP_04058203.1| serine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] gi|228275057|gb|EEK13860.1| serine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] Length = 423 Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats. Identities = 161/426 (37%), Positives = 236/426 (55%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I +IR+N E + LKKR+ E ++LDEK R L ++++ ++ N S +I Sbjct: 1 MLQISYIRENKEKVLTGLKKRNFGELELVEQAIALDEKRRALQTELDEALSKSNKLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + EG +A K +T+ KE L E E +SL +++ IPN+P E VP G S Sbjct: 61 GALMKEGKKEEAEAAKEQTAQYKELTKRLNAELDETATSLTQVLYRIPNIPNEIVPEGKS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N+ + G+ P+ + H+E+ + ++DF+ KL+GA F V G A L+RAL Sbjct: 121 AEDNLNVFQAGEIPALYEGALPHWELAKKYDIIDFELGVKLTGAGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 + +D +T GY E P +V +++ YGTGQ+P M+ D +LIPT+EV +T Sbjct: 181 ISYFLDKNT-AAGYQEFQVPHMVNEDSGYGTGQLPDKEGQMYHVQLDNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ I+ P+ T P FR EAGS G RG+ R HQF K E+V I + S+ Sbjct: 240 NIFRDVILSEADFPICCTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDRSYQ 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +M+ + IL L L YR++ LC GDLGF++ TYD EV+ Q + EISS S Sbjct: 300 ALTQMVEHVKGILNELKLPYRILRLCGGDLGFTSAITYDFEVYSTAQEKWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R+R+ K + HTLNGS +A+ R L ILENY +G + IP VLR Y Sbjct: 360 TFQANRLKLRFRNSEGK-TQLVHTLNGSSLALPRVLAGILENYQTPEG-ILIPEVLRKYT 417 Query: 418 NNLAVI 423 +I Sbjct: 418 -GFDII 422 >gi|296119113|ref|ZP_06837685.1| serine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] gi|295967948|gb|EFG81201.1| serine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] Length = 419 Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats. Identities = 151/427 (35%), Positives = 241/427 (56%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R++P+ + + R +PQ + +L D R I +++RA + + +IG Sbjct: 1 MIDLKFLRESPDVVRASQVTRGEDPQLVDQLLEADAARRSAILAADELRAEQKAFGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L ++ LK ++ E+ + E ++ L + NV Sbjct: 61 QASPEERPA----LLEGSNELKTKVKEAEEAQREAEQQVETLQYKLSNVVEGAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ I++ G+KP ++H E+GE+LGL+D R K+ GARF LTG A L+ ++ Sbjct: 115 DDFIVLEHYGEKPEFDFEPKDHLELGESLGLIDTKRGAKIGGARFYYLTGDGAFLQLSMM 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 + G++ + P+LVR E M GTG + +D+++ D +L+ TSEV+L Sbjct: 175 -VLAAQKARAAGFSLMIPPVLVRPEIMAGTGFLGDHSDEIYYLERDDLYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ P+++ + FR EAGS G+DTRG+LR HQF K E+ + + ED+ + Sbjct: 234 YHKDEIIDLSEGPIQYAGWSSCFRREAGSHGKDTRGILRVHQFDKVEMFTYCKPEDAEKQ 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H ++LS E+L ++LHYRV+ + GDLG SA + YD E W+ Q YRE++S S C Sbjct: 294 HLQLLSMEREMLDAMNLHYRVIDVAGGDLGASAARKYDTEAWVPTQGTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD N K + TLNG+ +A R L+AILEN ADGSV IP LRP M Sbjct: 354 FQARRLQTRYRDENGK-TQIAATLNGT-LATTRWLVAILENNQQADGSVVIPEALRP-MM 410 Query: 419 NLAVIKK 425 +++ Sbjct: 411 GKDILEP 417 >gi|157414684|ref|YP_001481940.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|172047058|sp|A8FKH6|SYS_CAMJ8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157385648|gb|ABV51963.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|307747324|gb|ADN90594.1| Seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1] gi|315932677|gb|EFV11607.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327] Length = 411 Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats. Identities = 179/419 (42%), Positives = 259/419 (61%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTALEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A ++LK + S K ++ + + + + L+++ IPN+P E VP+G Sbjct: 61 TA------EDKESLKAKLSENKSKINEQSVKVNALENELEEIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ ++ V PS +EHFE+GE+L +DF R K+S +RF VL A L RAL Sbjct: 115 DENVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + HG+ V+ P LV M+GTGQ+PKF +DM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSHGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S++LP++ T + FR EAGSAGRDTRG++RQHQF K ELVSIT+ E S + Sbjct: 234 LYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN YREISS S C + Sbjct: 294 FNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP L+ Y Sbjct: 354 FQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDALKKYF 411 >gi|283797843|ref|ZP_06346996.1| serine--tRNA ligase [Clostridium sp. M62/1] gi|291074531|gb|EFE11895.1| serine--tRNA ligase [Clostridium sp. M62/1] gi|295091944|emb|CBK78051.1| seryl-tRNA synthetase [Clostridium cf. saccharolyticum K10] Length = 425 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 141/428 (32%), Positives = 225/428 (52%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++ + + P + +++LD +NR K+ +D+RA +N + Q Sbjct: 1 MLDLRFVRENPEIVKQNIRNKFQDSKLPLVDEVIALDAENRAAKKEADDLRAGKNKIAKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + LK + +L LE++E E+ + K++ IPN+ VPIG Sbjct: 61 IGAMMAQGKKEEAEELKKKVGEDAARLAELEEKEKELSERITKIMMTIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ ++ G+ H EI E +D D A K++G F L G +A L A Sbjct: 121 DDSENVEVQKYGEPVVPDFEIPYHTEIMERFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 VISYARDFMI-DRGFTYCVPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +++ + LP T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS Sbjct: 240 IGKFIDTVLKEEELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +R+ ++ + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWFDRLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R N K F HTLN + VA R LIA LEN L ADGSV IP VLRPY Sbjct: 360 GDAQARRLKIRVNGENGK--YFAHTLNNTVVAPPRMLIAFLENNLQADGSVRIPEVLRPY 417 Query: 417 MNNLAVIK 424 M ++ Sbjct: 418 MGGKTELR 425 >gi|320527135|ref|ZP_08028322.1| seryl-tRNA synthetase [Solobacterium moorei F0204] gi|320132463|gb|EFW25006.1| seryl-tRNA synthetase [Solobacterium moorei F0204] Length = 433 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 134/429 (31%), Positives = 215/429 (50%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI IR+NPE + +KK+ + + + S+D + R + +++R RN S Q Sbjct: 1 MIDINLIRENPELVKENIKKKFQDEKLVLVDEVQSMDTEYRAAKTRGDNLRGERNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + + N+ + K + E+L LE +E ++ +K + IPN+ VPIG Sbjct: 61 IGLYMRDKNIEAAEQAKQFVKDMDEELESLEVKEAKLAEEIKNRMMVIPNIIDSSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ H +I E L +D D A + SG F L G +A L + Sbjct: 121 DDSENVEIQKYGEPFVPSFEIPYHTDILEKLAGIDIDSAGRTSGNGFYYLQGDIARLHSS 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D G+T P ++ + G + + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-NRGFTYFIPPFMIHSSVVTGVMSFAEMQNMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +I++ + LP T+ +P FR E G+ G + RG+ R HQF K E+V + + E+S Sbjct: 240 IGRFMGQILKEEDLPYALTSYSPCFRKEVGAHGIEERGLYRVHQFEKQEMVVVCKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 DWYDKLWQNSVDFFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + F HTLN + VA R LIA +EN LN DGS+ IP LRPY Sbjct: 360 GDAQARRLGIRIKGEKGN--YFAHTLNNTVVAPPRMLIAFVENNLNEDGSLNIPEPLRPY 417 Query: 417 MNNLAVIKK 425 M I Sbjct: 418 MGGQEKIVP 426 >gi|256374275|ref|YP_003097935.1| seryl-tRNA synthetase [Actinosynnema mirum DSM 43827] gi|255918578|gb|ACU34089.1| seryl-tRNA synthetase [Actinosynnema mirum DSM 43827] Length = 416 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 147/427 (34%), Positives = 239/427 (55%), Gaps = 14/427 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NPE + + + R + + +LS DE+ R + + + +R + + Q+G Sbjct: 1 MIDLKALRENPEAVRASQRARGEDESLVDALLSADERRRSAVSRADTLRGEQKAFGKQVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A +AL + L ++ E ++ + L +L +PN+ + P Sbjct: 61 KARG----EEREALLVKGKELAAEVKAAEADQAAAEAELTELHRSVPNLVHPDAP-EGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ ++++ VG+ +H ++G LG +D +R K+SG+RF LTG A LE AL Sbjct: 116 DDYVVVKHVGEPREFDFEPLDHLDLGTRLGAIDMERGAKVSGSRFYFLTGIGAQLELALL 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 + T G+ + P LVR E M GTG + + +++ D +L+ TSEV L Sbjct: 176 NMAVAQAT-AAGFQLMITPTLVRPEVMAGTGFLGAHSSEIYRLEADDLYLVGTSEVPLAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EII+ P R+ + +R EAGS G+DTRG++R HQF K E+ S E++ E Sbjct: 235 YHADEIID---GPRRYAGWSSCYRREAGSYGKDTRGIIRVHQFNKVEMFSYVPPEEAEAE 291 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L+ EE+L ++++ YRV+ GDLG SA + +D E W+ Q YRE++S S C Sbjct: 292 HARLLAWEEEMLAKVEVPYRVIDTAAGDLGTSASRKFDCEAWVPSQQAYRELTSTSNCTT 351 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+N RYRD N KS + T TLNG+ +A R ++AILEN+ ADGSV +P LRP++ Sbjct: 352 FQARRLNVRYRDENGKS-QITATLNGT-LATTRWIVAILENHQQADGSVVVPQALRPFL- 408 Query: 419 NLAVIKK 425 V+ Sbjct: 409 GKDVLLP 415 >gi|15604615|ref|NP_221133.1| seryl-tRNA synthetase [Rickettsia prowazekii str. Madrid E] gi|6226194|sp|Q9ZCG5|SYS_RICPR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|3861310|emb|CAA15209.1| SERYL-TRNA SYNTHETASE (serS) [Rickettsia prowazekii] gi|292572433|gb|ADE30348.1| Seryl-tRNA synthetase [Rickettsia prowazekii Rp22] Length = 425 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 209/424 (49%), Positives = 286/424 (67%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L +R +EP S I LD++ R + I++ + R S +G Sbjct: 1 MLNIKWIRENQELFDEKLSQRFIEPMSSKIAMLDQEKRKITSLIQEFQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + + L+ + + + E+L LE + + + L +L++ +PN+P EEVP G + Sbjct: 61 -MVSKSGEEFEELQRDVNHINEKLAELE-QNLDNNNELNELLNMLPNIPDEEVPYGIDGS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+R+ G K + L+++HFE+G L LMDF++ K+SG+RF L G LA LERAL Sbjct: 119 MNKLVRAYG-KTNKNALNKQHFELGTKLNLMDFEQTAKISGSRFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT E + E+S P LVRD AMY GQ+PKF+++ F TT+G LIPT+EVSL N+ Sbjct: 178 FMIDIHTKEFDFFEISPPFLVRDRAMYNAGQLPKFSEESFITTNGYRLIPTAEVSLVNIV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II+ + LP+R+ FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 238 ADTIIQREKLPMRYVAYTTCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESKNEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E ILK+LDL YRV+ LCTGD+GF+A KTYD+EVWL GQN YREI+SCS CG+FQ Sbjct: 298 YITNASETILKKLDLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQNQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNETTLVHTLNASGLPIGRTIVAILENYQNNDGSITIPDVLINYMGGL 417 Query: 421 AVIK 424 I Sbjct: 418 QKIT 421 >gi|86151194|ref|ZP_01069409.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|315123949|ref|YP_004065953.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841541|gb|EAQ58788.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|315017671|gb|ADT65764.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 411 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 179/419 (42%), Positives = 259/419 (61%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTALEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A ++LK + S K ++ + + + + L+++ IPN+P E VP+G Sbjct: 61 TA------EDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ ++ V PS +EHFE+GE+L +DF R K+S +RF VL A L RAL Sbjct: 115 DENVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + G+ V+ P LV M+GTGQ+PKF +DM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S++LP++ T + FR EAGSAGRDTRG++RQHQF K ELVSIT+ E S + Sbjct: 234 LYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN YREISS S C + Sbjct: 294 FNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP VL+ Y Sbjct: 354 FQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKYF 411 >gi|261879263|ref|ZP_06005690.1| serine-tRNA ligase [Prevotella bergensis DSM 17361] gi|270334095|gb|EFA44881.1| serine-tRNA ligase [Prevotella bergensis DSM 17361] Length = 430 Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats. Identities = 149/422 (35%), Positives = 238/422 (56%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H E + +L D R +K++ + ++N S + Sbjct: 1 MLTLKLIGEETERVIKGLEKKHFEGAREAIDKVLEHDRVRRESQQKLDSNKQQQNLLSKK 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + +KNE + LK L++ ++ + + IPN+PLE+VP G Sbjct: 61 IGSLMKEGKKDEANEIKNEVAELKALDKSLQEIMNKAQEDMNNELLQIPNIPLEKVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++++ G P + H+++ + L+DFD K++GA F + G +A +RA Sbjct: 121 DAADNVVVKEGGTVPDLGENALCHWDLLKKYNLVDFDLGVKVTGAGFPIYMGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY EV P +V + + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPYVVNEASGYGTGQLPDKEGQMYHVNLDELYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I + S Sbjct: 240 TNIFRDEILDEKELPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPDHSN 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ML+ E +LK+L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 DSLSEMLNHVEGLLKKLELPYHILLLCGGDMSFTSAICYDFEVWSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 GN+Q+ R++ RYR ++K + HTLNGS +A+ R + AI+EN +G + +P VL PY Sbjct: 360 GNYQANRLHCRYRREDTKKTELCHTLNGSALALPRIVAAIIENNQTPEG-IRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|161529019|ref|YP_001582845.1| seryl-tRNA synthetase [Nitrosopumilus maritimus SCM1] gi|238686942|sp|A9A4V3|SYS_NITMS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|160340320|gb|ABX13407.1| seryl-tRNA synthetase [Nitrosopumilus maritimus SCM1] Length = 421 Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats. Identities = 155/424 (36%), Positives = 244/424 (57%), Gaps = 4/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +++ P+ + LK R ++ + ++ D+K R I K ++ + RRN +I Q Sbjct: 1 MLDPKLLKEKPQVIRDMLKARAVDFDLDGLIESDQKRREFIIKTDEFKKRRNEIGNEIAQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + +E + +L LE ++ E+ S KL +PN+ E VP+G Sbjct: 61 KKKAG--EDTSTILDEMKNVSAELAKLESQQEEIESKYAKLAFTVPNLVHESVPVGPDDT 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +R G+ P +H ++ E L L+D +RA K++GARF L L L ++L Sbjct: 119 ANKEMRKWGEIPQFDFKINDHIDMSENLDLVDLERAAKVAGARFYYLKNDLVRLNQSLIH 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNL 239 F +D +E Y+ V P ++ +M G F + ++ + ++I TSE ++ + Sbjct: 179 FALDF-LAEKEYSLVQPPYMINRSSMEGAVIADDFEEVIYKVEEEDLYMIGTSEHAMAAM 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EIIE K LP+R+ ++P FR EAG+ GRD +G+ R HQF K E R EDS+ EH Sbjct: 238 HSKEIIEGKDLPIRYAGVSPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVYARPEDSWKEH 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+ML+ AEE ++L++ +RV+ L TGD+G + KTYD+E W+AGQN YREI SCS C ++ Sbjct: 298 EKMLAVAEEFYQKLEIPHRVMLLSTGDMGKISAKTYDIEAWMAGQNSYREIVSCSNCLDY 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+ R+RD ++ ++ HTLN + VA R L++I+EN+ DG + IP VL+ YM N Sbjct: 358 QARRLKIRFRDKTNEDTQYIHTLNSTLVATTRVLVSIMENFQTKDGHIKIPQVLQSYMGN 417 Query: 420 LAVI 423 I Sbjct: 418 QKEI 421 >gi|325846101|ref|ZP_08169195.1| serine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481694|gb|EGC84729.1| serine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 429 Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats. Identities = 139/431 (32%), Positives = 224/431 (51%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + +KK+ + + ++ LD+K R + + +++RA+RN S Q Sbjct: 1 MLDIKFVRENPELVKENIKKKFQDEKLVLVDEVIELDQKLRDVKTEGDNLRAKRNKTSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K E + ++L +E++ + LK+ + IP + + VPIG Sbjct: 61 IGALMGQGKKEEAEEVKKEVGDINDRLVQIEEDTRKFQDQLKEKMQVIPQMIDDSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ + + H +I E+ +D D A SGA F L G +A L A Sbjct: 121 DDSENVEIERFGENVTPDYEVPYHVDIMESFNGIDLDSARDTSGAGFYYLKGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + GY P ++R + + G + D M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DKGYEYHIPPFMIRSDVVTGVMSFAEMEDMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + + I E +PL+ T+ +P FR E G+ G + RG+ R HQF K E+V I + EDS Sbjct: 240 IGKFINSINEESDMPLKMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ + E + L++ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 KFYDELWQNTVEFFRSLEIPVRTLECCSGDLADLKVKSCDVEAWSPRQGKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R F HTLN + VA R LIA LEN L DGSV IP L+ Y Sbjct: 360 GDAQARRLKIRLRGEKGN--YFAHTLNNTVVAPPRMLIAFLENLLQEDGSVKIPQPLQMY 417 Query: 417 MNNLAVIKKEH 427 M + + ++ Sbjct: 418 MGGMEKLVPKN 428 >gi|145345412|ref|XP_001417206.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577433|gb|ABO95499.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 502 Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats. Identities = 134/431 (31%), Positives = 224/431 (51%), Gaps = 11/431 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +++R N E + R ++ + I++ E L K +++R RRN+N+ + Sbjct: 74 IDFKFVRDNAELVQKNATTRKVDVDVQEIIAKYEALNALNFKCDELRERRNANAKSM--- 130 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + + D L E +K++L LE + + S L+ + +PN+ +VPIG+ N Sbjct: 131 KGKMDKEVRDGLIAEGKAIKDELAALEGDLAGLESELQTMAQRLPNLTHPDVPIGSEENT 190 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + +VG++ + + H ++GE LG+ DF+ +K+SG+RF LTG A LE AL + Sbjct: 191 -VTRATVGEQRAFTFPVQNHVDVGEKLGMFDFETGSKVSGSRFVYLTGVGAMLELALINW 249 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 G+ + P +VR + G P+ + + T+E+ L + Sbjct: 250 AF-AKVLSKGFKPMMVPDMVRSSVVEKCGFQPRAENTQVYSIENSDLCMAGTAELLLGGV 308 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y E++E LP++ + FR+EAG+AG TRGM R HQF K E+ + E S H Sbjct: 309 YMDEVVEESQLPIKMAAFSHCFRTEAGAAGAQTRGMYRLHQFSKVEMFVVATPEQSDALH 368 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E ++ E+ L H++V+ + T DLG A + +D+E W+ Y EISS S C ++ Sbjct: 369 EELIGIETEMFAELGFHFKVLDMPTEDLGAPAYRKFDVEAWMPALERYGEISSASNCTDY 428 Query: 360 QSRRMNSRYRDP--NSKSLKF--THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 Q+RR+N +YR + K HTLN + A+ R ++ ILEN+ DGSV +P LRP Sbjct: 429 QARRLNIKYRPNAVDGKKQPLMHCHTLNATACAIPRMIVTILENFQQEDGSVVVPEPLRP 488 Query: 416 YMNNLAVIKKE 426 Y+ + V++ E Sbjct: 489 YLGGMDVLRPE 499 >gi|193217033|ref|YP_002000275.1| seryl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] gi|238692483|sp|B3PNG9|SYS_MYCA5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|193002356|gb|ACF07571.1| seryl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] Length = 424 Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats. Identities = 174/429 (40%), Positives = 260/429 (60%), Gaps = 8/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD+++I N + L R+ + I +L E LI ++E ++A+RN S +IG Sbjct: 1 MLDLKFILNNKNEVIKKLSTRNYDLANITKINNLGEMRSKLIFELEKLQAKRNKLSDEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 I + N D+L E + +K Q+ ++ E ++ S + +++ IPN+P ++VP+G+ Sbjct: 61 --IKKRNNENCDSLIEEVNAIKAQIEKVDHEADDIISQVNDILTKIPNLPYDDVPVGSDE 118 Query: 120 -NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + ++ + H++I L ++DF RA KL+ RF + A L RAL Sbjct: 119 LDNKVIKEHASLGRGLVKGVEAHYDIATKLDIIDFTRAVKLAQTRFVLYKNAGAKLIRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 FM+D H +GY E+ LV + ++GTGQ+PKF DD+F WLIPT+EV LT Sbjct: 179 ANFMLDTHI-NNGYKEIMPAHLVNSKMLFGTGQLPKFKDDLFRVSDSDLWLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + EI+ P+++ FRSEAGS GRDTRG++RQH+F K ELV I R+ED+ Sbjct: 238 NYHYDEILNLNE-PIKYVAYTKCFRSEAGSGGRDTRGIIRQHEFHKVELVKIVRQEDAMG 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+M++ A+ IL L+L YR + LCTGD+GFS+ KT DLE+W+ + YRE SS S C Sbjct: 297 EWEKMVNDAKNILTLLELPYREILLCTGDMGFSSAKTIDLEIWIPSEQRYRETSSISICK 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RY+D + K K+ T+NGSGVA+ R + AILENY N+DG++T+P VL PYM Sbjct: 357 DFQARRAKIRYKDADGK-TKYAFTMNGSGVAIDRVMAAILENYQNSDGTITVPKVLVPYM 415 Query: 418 NNLAVIKKE 426 N + I+ + Sbjct: 416 NGITKIEAK 424 >gi|51473951|ref|YP_067708.1| seryl-tRNA synthetase [Rickettsia typhi str. Wilmington] gi|67461735|sp|Q68VW6|SYS_RICTY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|51460263|gb|AAU04226.1| SerRS [Rickettsia typhi str. Wilmington] Length = 425 Score = 362 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 209/424 (49%), Positives = 285/424 (67%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L +R +EP S I LD + R + I++ + R S +G Sbjct: 1 MLNIKWIRENQELFDEKLSQRFIEPMSSKIAMLDREKRKITSLIQEFQHARKVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + + L+ + + + E+L LE + + + L +L++ +PN+P EEVP G + Sbjct: 61 -MVSKSGEEFEELQRDVNHINEKLEELE-QTLDNNNELNELLNMLPNIPDEEVPYGIDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+RS G + L+++HFE+G L LMDF++ K+SG+RF L G LA LERAL Sbjct: 119 MNKLVRSYG-NTNKNALNKQHFELGTKLNLMDFEQTAKISGSRFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E + E+S PLLVRD AMY GQ+PKF+++ F TT+G LIPT+EVSL N+ Sbjct: 178 FMVDIHTKEFDFFEISPPLLVRDSAMYNAGQLPKFSEESFITTNGYRLIPTAEVSLVNIV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II+ + LP+R+ FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 238 ADTIIQREKLPMRYVAYTTCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESKNEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E ILK+LDL YRV+ LCTGD+GF+A KTYD+EVWL GQN YREI+SCS CG+FQ Sbjct: 298 YITNASETILKKLDLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQNQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILENY N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNETTLVHTLNASGLPIGRTIVAILENYQNNDGSITIPDVLINYMGGL 417 Query: 421 AVIK 424 I Sbjct: 418 KKIT 421 >gi|88607906|ref|YP_505030.1| seryl-tRNA synthetase [Anaplasma phagocytophilum HZ] gi|123736440|sp|Q2GKS1|SYS_ANAPZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|88598969|gb|ABD44439.1| seryl-tRNA synthetase [Anaplasma phagocytophilum HZ] Length = 428 Score = 362 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 209/427 (48%), Positives = 280/427 (65%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI++I+ NPE D A+ R LE Q+ I+ LD + R L+ ++ +R +RN+ + ++ Sbjct: 1 MHDIEFIKNNPELFDKAMLSRGLESQAAKIIELDLQKRKLLTELYALREQRNAITKEVTV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + + L ++ LE+ L+ +PN+P + VP G SA+ Sbjct: 61 LKQSG--ADCSSHVETSKKLAHEISELEERIKRDTGLSY-LLCSLPNIPDDAVPFGKSAD 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +RS G+K S + H+ +GE L LMDF RA LSG+RFS+L+G LA LER L Sbjct: 118 DNVEVRSYGQKRSFSFEIKPHYVLGEMLNLMDFRRAAFLSGSRFSILSGQLAALERGLAS 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+++HT E GYTEV P LV D AM+ GQ+PKF D F TTD L+PTSEV LTNL Sbjct: 178 FMLEMHTKEFGYTEVFHPSLVNDLAMFNVGQLPKFTHDSFQTTDAMRLVPTSEVVLTNLV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++ + SLPLRFT + FRSEAGSAG+DTRGM+RQHQF K ELVSIT S E E Sbjct: 238 ANTNLHRNSLPLRFTAYSQCFRSEAGSAGQDTRGMIRQHQFSKVELVSITDASQSNVELE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RMLS AEE+LKRL+L YRVV LCTGD+GFSA +YD+EVW+ QN YREISSCS C +FQ Sbjct: 298 RMLSVAEEVLKRLELPYRVVLLCTGDMGFSASISYDIEVWMPAQNKYREISSCSNCKDFQ 357 Query: 361 SRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +RRM ++ Y + +K F HTLNGS +A+GR + AI+ENY N+DG++TIP LR +M+ Sbjct: 358 ARRMGAKCFYLEKQNKRSSFVHTLNGSALALGRTIAAIMENYQNSDGTITIPDALRKFMS 417 Query: 419 NLAVIKK 425 I+ Sbjct: 418 -ADYIRP 423 >gi|86153826|ref|ZP_01072029.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842787|gb|EAQ59999.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 411 Score = 362 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 178/419 (42%), Positives = 257/419 (61%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTALEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A ++LK + S K ++ + + + + L+++ IPN+P E VP+G Sbjct: 61 TA------EDKESLKAKLSENKSKINEQSAKVNVLENELEEIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ ++ V PS +EHFE+GE+L DF R K+S +RF VL A L RAL Sbjct: 115 DENVELKKVLNPPSFDFTPKEHFELGESLNWFDFMRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + G+ V+ P LV M+GTGQ+PKF +DM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S++LP++ T + FR EAGSAGRDTRG++RQHQF K ELVSI + E S + Sbjct: 234 LYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSIAKPEQSDSV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN YREISS S C + Sbjct: 294 FNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP VL+ Y Sbjct: 354 FQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKYF 411 >gi|299117081|emb|CBN73852.1| conserved unknown protein [Ectocarpus siliculosus] Length = 509 Score = 362 bits (928), Expect = 8e-98, Method: Composition-based stats. Identities = 205/440 (46%), Positives = 266/440 (60%), Gaps = 17/440 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ----SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 LD I NP+ + +K R + I L + R LI ED +RN+ SAQ Sbjct: 66 LDSVLISTNPDLVVDHMKARRMGEDSVEAVHRIGDLMDNRRELIMTKEDALKQRNAMSAQ 125 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ + G + KNE ++ + E++ +EV S L L+ +PN+ VP G Sbjct: 126 IGKLMKAGQAKEAEEKKNEVQSINKIAGSAEEDLNEVDSELNTLLMRLPNLLDSRVPDGD 185 Query: 118 SANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 EN+++ + H E+ LG D + A ++SGARFSVL G LA LER Sbjct: 186 GEEENVVVAEWGQEYIKNGEEYLWHDEVAIKLGGWDPEGAARISGARFSVLKGPLARLER 245 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPT 231 ALGQ+++D+HT+EHGYTEVS PLLV ++ GTGQ+PKF +D+F T +LIPT Sbjct: 246 ALGQWLLDVHTTEHGYTEVSLPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPT 305 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 EV LTNL ++++ LP+ L P FR+EAGSAGRDTRG+LRQHQF K ELV T Sbjct: 306 GEVPLTNLLRGQLLDKAQLPMSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTT 365 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS EHE + AE +LK L L +R VSLC+GD+GF A YDLEVW+ GQ +REIS Sbjct: 366 PEDSRNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQGAFREIS 425 Query: 352 SCSTCGNFQSRRMNSRYR--DPNSKSLK----FTHTLNGSGVAVGRCLIAILENYLNA-D 404 SCS C +FQ+RRMN RYR P +K K HT+NGSGVAVGR L+A+LENY N D Sbjct: 426 SCSNCQDFQARRMNLRYREPTPEAKKKKSRNLPCHTINGSGVAVGRALVAVLENYYNPID 485 Query: 405 GSVTIPTVLRPYMNNLAVIK 424 GSV+IP VLRPYM ++ Sbjct: 486 GSVSIPDVLRPYMGGAEKLE 505 >gi|13357663|ref|NP_077937.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762301|ref|YP_001752189.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|183508823|ref|ZP_02958276.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701768|ref|ZP_02971450.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|30173220|sp|Q9PR38|SYS_UREPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189083594|sp|B1AI95|SYS_UREP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|11271515|pir||D82932 seryl-tRNA synthetase UU106 [imported] - Ureaplasma urealyticum gi|6899062|gb|AAF30512.1|AE002111_1 seryl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827878|gb|ACA33140.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675788|gb|EDT87693.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701042|gb|EDU19324.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 418 Score = 362 bits (928), Expect = 8e-98, Method: Composition-based stats. Identities = 178/418 (42%), Positives = 257/418 (61%), Gaps = 4/418 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI IR++ + + + + I LD R L+++ +++ A++N S +IG Sbjct: 1 MFDINLIRKDIATTKEKMLNKKVPSNLFDQIFDLDVLVRSLMQQEQNLNAKKNQLSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + + + +K +L + L KL+ IPN+P + VPIG Sbjct: 61 IL-AKNKDPKLQQTLDLVNNIKNELQDISLTLSNKQDELNKLLLVIPNMPDDSVPIGNDE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+ V K L H+++ L+DFD++TK++G+RF + T A L RAL Sbjct: 120 NDNVEIKKVFKPKKFDFLPLAHWDLAVKNKLIDFDKSTKITGSRFIIYTNFGARLYRALQ 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 QF +D++ + G++E+ AP++V E++ G+G +PKFADD+F +L PT+EV LTN Sbjct: 180 QFCLDMNV-KAGFSEIWAPVIVNQESLIGSGNLPKFADDLFKLENSNYYLSPTAEVQLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ +EI+++ LPL +T L P FRSEAGSAGRD RG++RQHQF K ELV + + EDSF E Sbjct: 239 LHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L+L YR + LCTGDLGFS+ KTYDLEVWL N Y+EISSCS C N Sbjct: 299 LESMTRQAESILEALELPYRRIVLCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTN 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR RY++ + + HTLNGS +A+ R AI+ENY DGS+ IP VL+ Y Sbjct: 359 FQARRAKIRYKETIDATTELVHTLNGSSLAIDRLWAAIVENYQQEDGSINIPKVLKKY 416 >gi|300859395|ref|YP_003784378.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|300686849|gb|ADK29771.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|302331637|gb|ADL21831.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002] gi|308277330|gb|ADO27229.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis I19] Length = 427 Score = 362 bits (928), Expect = 8e-98, Method: Composition-based stats. Identities = 144/426 (33%), Positives = 241/426 (56%), Gaps = 12/426 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++++R+NP+ + + + R +P+ + +L+ DE R I+ +++R+ + +IGQ Sbjct: 10 IDLKFLRENPDIVRESQRIRGEDPELVDKLLAADEARRAAIQVADELRSEHKAFGKKIGQ 69 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A AL ++ LK ++ E+ + + + +L NV + + Sbjct: 70 A----APEERTALLEGSNELKAKVKEAEEAQSAAEAKVDELQMLFSNVVTDAP--AGGED 123 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + I++ VG+ + ++H E+GE+LGL+D R TK+ GARF LTG A L+ + Sbjct: 124 DFIVLEHVGEPRTFDFEPKDHLELGESLGLIDTKRGTKVGGARFYYLTGDGAFLQLGMLN 183 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 E+G+ + P+LVR E M GTG + +D+++ D +L+ TSEV+L Sbjct: 184 LAAQ-KARENGFQLMIPPVLVRPEIMQGTGFLGAHSDEIYYLERDDLYLVGTSEVALAGY 242 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EII+ P+++ + FR EAGS G+DTRG+LR HQF K E+ + ED+ +H Sbjct: 243 HKDEIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVFCKPEDAVEQH 302 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + +L ++L +++ YRV+ + GDLG SA + +D E W+ QN YRE++S S C F Sbjct: 303 QALLKMERDMLAAVEVPYRVIDVAGGDLGSSAARKFDTEAWVPTQNTYRELTSTSNCTTF 362 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+ +RYRD K+ + TLNG+ +A R L+AILEN ADGSV +P LRP++ Sbjct: 363 QARRLQTRYRDETGKA-QTCATLNGT-LATTRWLVAILENNQQADGSVIVPEALRPFV-G 419 Query: 420 LAVIKK 425 V++ Sbjct: 420 KDVLEP 425 >gi|161544988|ref|YP_153958.2| seryl-tRNA synthetase [Anaplasma marginale str. St. Maries] gi|146345524|sp|Q5PAH7|SYS_ANAMM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase Length = 429 Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats. Identities = 207/431 (48%), Positives = 274/431 (63%), Gaps = 5/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ I+++PE D A+ R Q+E I+ LD K R + + +R +RN+ + ++ Sbjct: 1 MHDIELIKKDPELFDRAMISRGFGEQAEKIIELDLKKRGELSTLYSLREQRNAVTREVAL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + L E++ LE + + L L+ +PNVP VP+G + Sbjct: 61 LKRSGI--ECTPQIEASKKLAEEIATLEH-SIKEDTKLSNLLESLPNVPDPIVPVGKDES 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +RS G++ R H+E+GE L L+DF RA LSGARFS+L G LA LERAL Sbjct: 118 HNVEVRSHGQRRDFAFGIRPHYELGEMLNLLDFKRAAVLSGARFSILKGQLAELERALAS 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE+S P+LV + MY GQ+PKF DD F TT+ L PTSEV+L NL Sbjct: 178 FMLDMHTKEFGYTEISHPVLVNERTMYNVGQLPKFHDDSFRTTNNFRLAPTSEVALANLV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S + SLP+RFT + FR+EAGSAG DTRGM+RQHQF K ELVSIT + S E E Sbjct: 238 SGTTLPRDSLPMRFTAYSQCFRAEAGSAGLDTRGMMRQHQFGKVELVSITTSDASNAELE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM S AEE+LKRL+L YRV+ LC+GD+GFSA +YDLEVW+ Q+ YREISSCS C +FQ Sbjct: 298 RMTSIAEEVLKRLELPYRVMLLCSGDMGFSASISYDLEVWMPAQDKYREISSCSNCRDFQ 357 Query: 361 SRRMNSRYRDPNSKSLK--FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +RRM ++Y +K HTLNGS +A+GR + AI+ENY N DGS+TIP VLR Y Sbjct: 358 ARRMGAKYFFFENKKKHSTLVHTLNGSALAIGRTIAAIMENYQNEDGSITIPDVLRKYTG 417 Query: 419 NLAVIKKEHIL 429 A+++ E L Sbjct: 418 ASAIMRAEDAL 428 >gi|313683011|ref|YP_004060749.1| seryl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] gi|313155871|gb|ADR34549.1| seryl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] Length = 414 Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats. Identities = 183/419 (43%), Positives = 255/419 (60%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +++N + AL ++ ++P + + +E + E ++A++N S G Sbjct: 1 MIDVKLLQKNFDETTTALMRKKVDPSVINELRTANENLKSAKTAYETLQAKQNELSRLFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q EG + D LK E K L L + +L +I IPN+P +VP G Sbjct: 61 QYKKEGKST--DELKIEVDANKATLNDLLDAQRAAEEALDAIIMRIPNIPDADVPDGEDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+NI IR V P+ +EH+E+ E G +DF+R KL+ +RFSV++G A LERAL Sbjct: 119 NDNIEIRKVLTPPTFSFTPKEHWELAEQNGWIDFERGVKLAKSRFSVVSGMGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 FM+D + E G+ E S P+LV A+ GTGQ+PKF DD+F + +LIPT+EV LTN Sbjct: 179 NFMLDFN-RERGFEEYSVPMLVNRRALEGTGQLPKFEDDLFKVEEEELYLIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EI+ LP++ T FR EAGS GRD RGM+RQHQF K ELV+ITR + S Sbjct: 238 LFQDEILNGTDLPIKMTGYTSCFRKEAGSGGRDVRGMIRQHQFHKVELVAITRADQSDAV 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M++CA ++L L L +R+V+LCTGDLGF A +T DLEVWL GQN YREISS S + Sbjct: 298 FEDMVACASDLLAALGLPHRLVTLCTGDLGFGAARTVDLEVWLPGQNSYREISSVSNTRD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY+ HTLNGS +AVGR +IAI+EN+ DG++ IP VL+ Y+ Sbjct: 358 FQARRAKIRYK--EEGKNILAHTLNGSSLAVGRTMIAIMENFQQEDGTILIPAVLQKYL 414 >gi|315605628|ref|ZP_07880661.1| serine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312583|gb|EFU60667.1| serine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 424 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 148/430 (34%), Positives = 230/430 (53%), Gaps = 13/430 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NPE + + R P + I++ D K R ++ E++RA + S +G Sbjct: 1 MIDVRALRENPEPARASQRARGANPDLVDEIIAADAKRREALQAFENLRATQKEVSKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + + + L EQ+ E + +L +PN+ ++ VP+G Sbjct: 61 RASKEERPA----ILAKAKELAEQVKEAEGRAGAADAEADRLARLLPNLIVDGVPVGGEE 116 Query: 120 NENILIRSVGKKPSA---IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +L +++H IGE L +D R K+SGARF L G A LE Sbjct: 117 DFVVLRHEGPTPRDFAAEGFEAKDHLAIGEGLDAIDTKRGAKVSGARFYYLKGIGARLEL 176 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL +D +G+ + P LV + M GTG + + +D+++ D +L TSEV+ Sbjct: 177 ALMTMAMDQAL-ANGFVPMMTPTLVTPQVMGGTGFLNEHSDEIYYLPADDLYLTGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EI++ P R+ + +R EAGSAG+DTRG++R HQF K E+ S R ED+ Sbjct: 236 LAGYHADEILDLSGGPKRYMGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSYCRPEDA 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+R L+ EE+L +++L YRV+ GDLG SA + +D E WL Q Y E++S S Sbjct: 296 AEEHQRFLAWEEEMLAKVELPYRVIDTAAGDLGTSAARKFDCEAWLPTQERYMEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+ R R + TLNG+ +A R ++AILEN+ ADGSV +P LRP Sbjct: 356 CTTFQARRLGIRERREGGMAP--VATLNGT-LATTRWIVAILENHQRADGSVYVPEALRP 412 Query: 416 YMNNLAVIKK 425 Y+ L V+ Sbjct: 413 YLGGLEVLVP 422 >gi|58617193|ref|YP_196392.1| seryl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] gi|81311339|sp|Q5FGY8|SYS_EHRRG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|58416805|emb|CAI27918.1| Seryl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 425 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 215/428 (50%), Positives = 283/428 (66%), Gaps = 5/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI +I+ NPE D A++ R+ + I+ L + + ++ ++ RN+ + +I + Sbjct: 1 MHDIDFIKNNPELFDEAMQNRNFGKIAHKIIELSANKKHTLTQLYSLQKERNNITQEIEK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + D + + +++ + + S L L++ +PN+P ++VPIG N Sbjct: 61 LKK--DNIQCDTQIELSKEITKKINHIN-NMIKTDSELIDLLNILPNIPDKKVPIGKDEN 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI IR GKK + H+E+GE L LMDF +A KLSG+RF +L LA L+RAL Sbjct: 118 DNIEIRRYGKKVDFKFPPKTHYELGENLNLMDFKQAAKLSGSRFVILKSQLAQLDRALAN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GY+E+S P+LV + AMYG GQ+PKFADD F TTD LIPTSEV+LTNL Sbjct: 178 FMLDVHTQEFGYSEISHPVLVHESAMYGVGQLPKFADDSFKTTDNFRLIPTSEVALTNLV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S+ I + LP+R T + FRSEAGSAG+D RGM+RQHQF K ELVSI EE S E E Sbjct: 238 SNANINANELPIRLTACSQCFRSEAGSAGKDVRGMMRQHQFNKVELVSIVTEEQSELELE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM AEEILK+L+L YRV+ LCTGDLGFSA TYD+EVW+ QN YREISSCS C FQ Sbjct: 298 RMTQVAEEILKKLELPYRVMMLCTGDLGFSASITYDIEVWIPSQNQYREISSCSNCKAFQ 357 Query: 361 SRRMNSRYRD--PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +RRMN++Y +K KF HTLNGS +A+GR +IAILENY N DGS+TIP VLR YMN Sbjct: 358 ARRMNAKYHTISNGNKVNKFVHTLNGSALAIGRTIIAILENYQNQDGSITIPHVLRKYMN 417 Query: 419 NLAVIKKE 426 N +IKK+ Sbjct: 418 NQDIIKKQ 425 >gi|260593112|ref|ZP_05858570.1| serine--tRNA ligase [Prevotella veroralis F0319] gi|260534912|gb|EEX17529.1| serine--tRNA ligase [Prevotella veroralis F0319] Length = 429 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 148/422 (35%), Positives = 240/422 (56%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H E +L D R +K++ + +N S Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFSGAREAVEKVLEYDRLRRETQQKLDTNKQHQNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + +G + +K E + LK L++ + +++ IPN+P ++VP G Sbjct: 61 IGQLMKDGKKDEANNIKEEVAELKSADKALQEIMENAQKEMTEVLLTIPNIPNDDVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 AN+N++++ G KP+ ++ H+++ + L+DFD K++GA F + G +A +RA Sbjct: 121 DANDNVVVKEGGTKPNLPADAQCHWDLLKKFNLVDFDLGVKITGAGFPLYIGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY EV PL+V ++ GTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPLVVNQDSGLGTGQLPDKEGQMYHANLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 TNIFRDEILDEKELPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ML+ E +LK+L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 ESLDEMLNHVEGLLKKLELPYHILRLCGGDMSFTSAICYDFEVWSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R++ RYR K ++ HTLNGS +A+ R + AI+EN +G + +P VL PY Sbjct: 360 ESYQANRLHCRYRHAEDKKIELCHTLNGSALALPRIVAAIIENNQTPEG-IRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|306837119|ref|ZP_07470056.1| serine--tRNA ligase [Corynebacterium accolens ATCC 49726] gi|304566967|gb|EFM42595.1| serine--tRNA ligase [Corynebacterium accolens ATCC 49726] Length = 418 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 151/428 (35%), Positives = 246/428 (57%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + R +P + +L+ DEK R+ I+K +++R+++ S +IG Sbjct: 1 MIDLKLLRENPDVVRASQVTRGEDPSLVDQLLAADEKRRLAIQKADEVRSQQKSLGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L LK ++ E+ +++++L I NV Sbjct: 61 QASPEERPA----LLEGADELKAKVKEAEEARSAAEATVEELQYKIDNVVEGAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +L+ VG+ P ++H E+GE+LGL+D R K+ GARF LTG A L+ + Sbjct: 115 DDFVLVEEVGEIPHFDFEPKDHLELGESLGLIDVKRGAKVGGARFYYLTGDGAFLQLGML 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 E G+ + P+LVR E M GTG + + +D+++ D R+L+ TSEV+L Sbjct: 175 MLAAQ-KAREAGFQLMIPPVLVRPEIMSGTGFLGQHSDEIYYLPADDRYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ + PL++ + FR EAGS G+DTRG+LR HQF K E+ + ED+ Sbjct: 234 YHKDEIIDLSNGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVYCKPEDAEDM 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+++L +E+L ++L YR + + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HQKLLDMEKEMLAAMELPYRTIDIAGGDLGSSAARKFDNEAWVPTQGTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+++RYRD N K + TLNG+ +A R ++AILEN+ ADGSV +P LRP++ Sbjct: 354 FQARRLSTRYRDENGK-TQVAATLNGT-LATTRWIVAILENHQQADGSVVVPEALRPFV- 410 Query: 419 NLAVIKKE 426 V+ + Sbjct: 411 GKDVLTPQ 418 >gi|315926699|gb|EFV06078.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 411 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 178/419 (42%), Positives = 257/419 (61%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTTLEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A ++LK + S K ++ + + + + L+++ IPN+P E VP+G Sbjct: 61 TA------EDKESLKAKLSENKSKINEQSAKVNVLENELEEIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ ++ V PS +EHFE+GE+L DF R K+S +RF VL A L RAL Sbjct: 115 DENVELKKVLNPPSFDFTPKEHFELGESLNWFDFMRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + G+ V+ P LV M+GTGQ+PKF +DM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S++LP++ T + FR EAGSAGRDTRG++RQHQF K ELVSI + E S + Sbjct: 234 LYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSIAKPEQSDSV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN YREISS S C + Sbjct: 294 FNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP VL+ Y Sbjct: 354 FQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKYF 411 >gi|222640339|gb|EEE68471.1| hypothetical protein OsJ_26871 [Oryza sativa Japonica Group] Length = 527 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 141/459 (30%), Positives = 230/459 (50%), Gaps = 39/459 (8%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR+N + + ++ R+ + +L L ++ L K++E +RA RN+ + + Sbjct: 72 IDFKWIRENTDAVAANIRDRNSAANLDLVLQLYDEYLALQKEVERLRAERNAVA---NKM 128 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S+ AL E LKE L LE++ ++ L+ IPN + P+G + Sbjct: 129 KGKLEPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDAPVGGEESS 188 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 ++ + VG + + R+H ++G+ L L DFD A ++SG++F L LE AL + Sbjct: 189 -VVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNW 247 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM--------------------FC 221 I S+ G+T + P +VR + G P+ + Sbjct: 248 AITE-VSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQLLELVVLGGSYAHNFKKKVYSI 306 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + LI T+E+ + ++ I+ LP ++ + FR+EAG+AG TRG+ R HQF Sbjct: 307 DNSDQCLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSHCFRTEAGAAGAATRGLYRVHQF 366 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E+ R E+S HE +++ EE+ L LH++ + + TGDLG A + +D+E W+ Sbjct: 367 SKVEMFVFCRPEESDKCHEELITIEEELYASLGLHFKTLDMATGDLGAPAYRKFDIEAWM 426 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRD----------PNSK----SLKFTHTLNGSGV 387 G + Y EISS S C ++QSRR+ R+R K +F HTLN + V Sbjct: 427 PGLDRYGEISSASNCTDYQSRRLGIRFRPSPADPPPANAKKGKGSSGPTQFVHTLNATAV 486 Query: 388 AVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 AV R +I ILEN+ DG+V IP LRP+M L V+ + Sbjct: 487 AVPRLIICILENFQQEDGTVVIPEPLRPFMGGLEVLSPK 525 >gi|3157938|gb|AAC17621.1| Similar to seryl-tRNA synthetase gb|U10400 from S cerevisiae. EST gb|N96627 comes from this gene [Arabidopsis thaliana] Length = 573 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 143/460 (31%), Positives = 233/460 (50%), Gaps = 38/460 (8%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N E ++I ++ R+ E +L L E L K++E +R RN+ + + Sbjct: 77 IDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEVERLREERNNVAK---KM 133 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S + L E LKE L LE++ ++ L+ + IPN+ +VP+G + Sbjct: 134 KGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHPDVPVGGEDSS 193 Query: 122 NILIR--------------------SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG 161 I VG ++H ++G+ L L+DFD A ++SG Sbjct: 194 AIRQEVSYFCQNSLNSCVDEGILLSKVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSG 253 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 ++F L LE AL + + + GYT ++ P +VR + G P+ + Sbjct: 254 SKFFYLKNEAVLLEMALLNWTLS-QVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVY 312 Query: 222 TTD--GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + D + LI T+E+ + ++ I+ +LPL++ + FR+EAG+AG T+G+ R H Sbjct: 313 SIDGTDQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVH 372 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E+ I + EDS + H+ ++ E++ L LH++ + + T DLG A + +D+E Sbjct: 373 QFSKAEMFVICQPEDSESFHQELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEA 432 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYR--------DPNSK----SLKFTHTLNGSGV 387 W+ G + EISS S C ++QSRR+ RYR K + KF HTLN + Sbjct: 433 WMPGLGRFGEISSASNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATAC 492 Query: 388 AVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEH 427 AV R ++ +LENY DGSV IP LRP+M + +IK +H Sbjct: 493 AVPRMMVCLLENYQQEDGSVVIPEPLRPFMGGIELIKPKH 532 >gi|227834214|ref|YP_002835921.1| Seryl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|227455230|gb|ACP33983.1| Seryl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 434 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 147/426 (34%), Positives = 244/426 (57%), Gaps = 12/426 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++++R+NP+ + + R +P + +L+ DE+ R I K + +R+ + + +IGQ Sbjct: 16 IDLKFLRENPDVVRASQVNRGEDPSLVDQLLAADEQRRAAIVKADQLRSEQKAFGKKIGQ 75 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E + L ++ LKE++ +E + + +L + NV + Sbjct: 76 ASPEERPA----LLEGSNELKEKVKAAGEEAAAAEAKVTELQYQLSNVVEGAP--AGGED 129 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + I++ VG+KP ++H E+GE LGL+D R K+ GARF LTG A L+ + Sbjct: 130 DFIVLEEVGEKPQFDFEPKDHLELGETLGLIDVKRGAKVGGARFYYLTGDGAFLQLGMLM 189 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 E G+ + P+LVR + M GTG + + +D+++ D +L+ TSEV+L Sbjct: 190 LAAQ-KAREAGFKLMIPPVLVRPDVMQGTGFLGQHSDEIYYLPADDLYLVGTSEVALAGY 248 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EII+ PL++ + FR EAGS G+DTRG+LR HQF K E+ + ED+ H Sbjct: 249 HKEEIIDLSKGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVYCKPEDAEEMH 308 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +++L+ +++L+ ++L YR + + GDLG SA + +D E W+ Q+ YRE++S S C F Sbjct: 309 QKLLNMEKDMLEAMELSYRTIDIAGGDLGSSAARKFDNEAWVPTQDTYRELTSTSNCTTF 368 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+++RYRD N K ++ TLNG+ +A R L+AILEN+ ADGSV +P LRP++ Sbjct: 369 QARRLSTRYRDENGK-TQYAATLNGT-LATTRWLVAILENHQQADGSVVVPEALRPFV-G 425 Query: 420 LAVIKK 425 V+ Sbjct: 426 KDVLYP 431 >gi|255004361|ref|ZP_05279162.1| seryl-tRNA synthetase [Anaplasma marginale str. Virginia] Length = 429 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 207/431 (48%), Positives = 274/431 (63%), Gaps = 5/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ I+++PE D A+ R Q+E I+ LD K R + + +R +RN+ + ++ Sbjct: 1 MHDIELIKKDPELFDRAMISRGFGEQAEKIIELDLKKRGELSTLYSLREQRNAVTREVAL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + L E++ LE + + L L+ +PNVP VP+G + Sbjct: 61 LKRSGI--ECTPQIEASKKLAEEIETLEH-SIKEDTKLSNLLESLPNVPDPIVPVGKDES 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +RS G++ R H+E+GE L L+DF RA LSGARFS+L G LA LERAL Sbjct: 118 HNVEVRSHGQRRDFAFGIRPHYELGEMLNLLDFKRAAVLSGARFSILKGQLAELERALAS 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GYTE+S P+LV + MY GQ+PKF DD F TT+ L PTSEV+L NL Sbjct: 178 FMLDMHTKEFGYTEISHPVLVNERTMYNVGQLPKFHDDSFRTTNNFRLAPTSEVALANLV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S + SLP+RFT + FR+EAGSAG DTRGM+RQHQF K ELVSIT + S E E Sbjct: 238 SGTTLPRDSLPMRFTAYSQCFRAEAGSAGLDTRGMMRQHQFGKVELVSITTSDASNAELE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM S AEE+LKRL+L YRV+ LC+GD+GFSA +YDLEVW+ Q+ YREISSCS C +FQ Sbjct: 298 RMTSIAEEVLKRLELPYRVMLLCSGDMGFSASISYDLEVWMPAQDKYREISSCSNCRDFQ 357 Query: 361 SRRMNSRYRDPNSKSLK--FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +RRM ++Y +K HTLNGS +A+GR + AI+ENY N DGS+TIP VLR Y Sbjct: 358 ARRMGAKYFFFENKKKHSTLVHTLNGSALAIGRTIAAIMENYQNEDGSITIPDVLRKYTG 417 Query: 419 NLAVIKKEHIL 429 A+++ E L Sbjct: 418 ASAIMRAEDAL 428 >gi|294786719|ref|ZP_06751973.1| serine--tRNA ligase [Parascardovia denticolens F0305] gi|315226335|ref|ZP_07868123.1| serine--tRNA ligase [Parascardovia denticolens DSM 10105] gi|294485552|gb|EFG33186.1| serine--tRNA ligase [Parascardovia denticolens F0305] gi|315120467|gb|EFT83599.1| serine--tRNA ligase [Parascardovia denticolens DSM 10105] Length = 428 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 138/431 (32%), Positives = 231/431 (53%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR+NPE + + +KR + +L D R + E RA + + Sbjct: 1 MLDIQFIRENPEVVKESQRKRGESADLVDQVLQADRLRRDALADFESTRAEQKKMGKAVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A AE + + +T L ++ ++ + + + N+ E P G Sbjct: 61 AASAEERPA----IIAQTKELAAKVSEYKETADKATEDYTTAMWKLSNIVEPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + + H E+GE + +D R K+SG+RF L G +A LE A Sbjct: 117 DYVVVKKVGQIRDFAAEGFEPKNHLELGEGVAGIDMKRGVKVSGSRFYFLRGAIARLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D +G+ + P LVR E M GTG + A++++ D ++L+ TSEV+ Sbjct: 177 MLTMGVD-QAERNGFIMATTPTLVRPEIMAGTGFLNSHAEEIYRLREPDEQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EI++ PL++ + +R EAG+AG+DT G++R HQF K E+ ++E+S Sbjct: 236 LAGMHEDEILDLSHGPLKYAGWSSCYRREAGAAGKDTMGIIRVHQFNKVEMFVYCKQEES 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + +H+++L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 YEQHQKLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQERYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + S + TLNG+ +A R L+AILEN+ DGSV IP LRP Sbjct: 356 CTEYQARRLNIRERTEDG-STRPVSTLNGT-LATTRWLVAILENHQQKDGSVVIPAALRP 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGREVIEPT 424 >gi|326529173|dbj|BAK00980.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 511 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 143/444 (32%), Positives = 235/444 (52%), Gaps = 23/444 (5%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N + + ++ R+ + +L L ++ L K++E +RA RN+ + + Sbjct: 71 IDFKWIRDNRDVVATNIRNRNSAANLDVVLQLYDQYLALQKEVERLRAERNAVA---NKM 127 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + SL AL +E LKE L LE++ + L+ IPN +VP+G + Sbjct: 128 KGKLDPSLRHALVDEGKNLKEILIALEEDLVHLTDKLQLEAQSIPNTTHPDVPLGDEESS 187 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + VG + + ++H ++G+ L L DFD A+++SG++F L LE AL + Sbjct: 188 -VTRKEVGSQRNFSFTIKDHLQLGKDLDLFDFDAASEVSGSKFYYLKNEAVLLEMALVNW 246 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 I S+ G+T + P +VR + G P+ + + LI T+E+ + + Sbjct: 247 GI-AEVSKKGFTPLITPEIVRSSVVERCGFQPRAQNTQVYSIDNSDQCLIGTAEIPVGGI 305 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + + I+ LPL++ + FR+EAG+AG TRG+ R HQF K E+ R E+S H Sbjct: 306 HINSILPDSDLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESDKYH 365 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E +++ E + L LH++ + + TGDLG A + YD+E W+ G + Y EISS S C ++ Sbjct: 366 EELITIEENLYASLGLHFKTLDMATGDLGAPAYRKYDIEAWMPGLDRYGEISSASNCTDY 425 Query: 360 QSRRMNSRYRD-----------PNSK-----SLKFTHTLNGSGVAVGRCLIAILENYLNA 403 QSRR++ R+R K +F HTLN + VAV R +I+ILEN+ Sbjct: 426 QSRRLDIRFRPAPLEPPSATNNKKGKGASSGPTQFVHTLNATAVAVPRLIISILENFQQE 485 Query: 404 DGSVTIPTVLRPYMNNLAVIKKEH 427 DG+V IP LRP+M L V+ ++ Sbjct: 486 DGTVVIPEPLRPFMGGLGVLTPKN 509 >gi|255326158|ref|ZP_05367245.1| serine--tRNA ligase [Rothia mucilaginosa ATCC 25296] gi|255296869|gb|EET76199.1| serine--tRNA ligase [Rothia mucilaginosa ATCC 25296] Length = 436 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 158/437 (36%), Positives = 236/437 (54%), Gaps = 19/437 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI +R+NP+ + + R + + IL D R LI + E +RA +N+ + Sbjct: 1 MIDINLLRENPDVFRASQRARGKDETHVDRILEADTARRALIGEYETLRAEQNAFGKTVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E +LV K + + E E + E +LIS I N+ ++ VP+G Sbjct: 61 KAPKEEKPALVAQAKELAARVNEAKTASEAKTAEYE----ELISSIENLIIDGVPVGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + R+H EIGE + +D R K+SGARF L G +A LE+A Sbjct: 117 DYVVVKEVGTPRDFTTEGFEPRDHLEIGELVDGIDMARGAKVSGARFYFLKGQVARLEQA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L +DL T EHG+T ++ P LVR E M GTG K D+++ D +L+ TSEV+L Sbjct: 177 LMWMALDLAT-EHGFTMMTTPTLVRPEIMNGTGFNVKHDDEIYRLERDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 ++ EI++ + ++ + +R EAGSAG+DTRG++R HQF K E+ E + Sbjct: 236 AGYHTDEILDFEKGAKKYLGWSSCYRREAGSAGKDTRGIIRVHQFNKAEMFVYCPVEQAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++LS EE+L+R L YRV+ GDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 EMHEKLLSLEEEMLQRCGLAYRVIDTAAGDLGTSAARKFDCEAWVPTQGTYRELTSTSNC 355 Query: 357 GNFQSRRMNSRYRDPN---------SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 +Q+RR+N R R P+ + TLNG+ +A R ++AILE + ADGSV Sbjct: 356 TTYQARRLNIRERTPDTVDEAGNVRKGRTRSVATLNGT-LATTRWVVAILETHQQADGSV 414 Query: 408 TIPTVLRPYMNNLAVIK 424 IP LRPYM VI Sbjct: 415 RIPEALRPYMGGAEVIP 431 >gi|159903816|ref|YP_001551160.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] gi|159888992|gb|ABX09206.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] Length = 442 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 183/430 (42%), Positives = 261/430 (60%), Gaps = 11/430 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLD-EKNRILIKKIEDIRARRNSNSAQIGQ 60 LD + IR+NP+ + L+ R ++ L LD EK + + ++ ++A N ++GQ Sbjct: 17 LDQRLIRENPKLIIEGLQTRGIQVDLGD-LQLDIEKLKQIEQQRNLLQAEGNEIGKEVGQ 75 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G + ++ L++ +T+K+++ LE+ E + + + I +PN+P +E PIG Sbjct: 76 KIRSGLDPSSPEIELLRSSGNTVKKKVNELEELEKAISEKITEEILHLPNIPDKECPIGK 135 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N+ +RS G +P +EH+EI E L L+D R+ K++ +RF L A LERA Sbjct: 136 NETDNVEVRSWG-EPLESKAYKEHWEIAEELQLLDTQRSVKIAKSRFVTLLNQGARLERA 194 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSL 236 L FM+D+H S+ GY EV P+LV ++ +GQ+PKF + C D WL PT+EV L Sbjct: 195 LINFMLDMH-SKKGYLEVLPPVLVNTASLTASGQLPKFSEESFRCAEDDLWLTPTAEVPL 253 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII S+ LP+++ P FR EAGS GRDTRG++R HQF K EL E S Sbjct: 254 TSLHRGEIIPSEELPIKYVAYTPCFRREAGSYGRDTRGLIRLHQFNKVELFWFVHPEKSP 313 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE++ AE IL+ L+L YRV+ LCTGDLGFSA +TYDLEVWL G N YREISS S C Sbjct: 314 AAHEQITKDAESILQALELPYRVLELCTGDLGFSASRTYDLEVWLPGANAYREISSSSIC 373 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + R K + HTLN SG+A+GR + AILEN N DG+V+IP L PY Sbjct: 374 NDFQARRSSIR--TKEGKKSRLVHTLNASGLAIGRTMAAILENGQNLDGTVSIPDALVPY 431 Query: 417 MNNLAVIKKE 426 I+ E Sbjct: 432 F-GKNKIQPE 440 >gi|327312423|ref|YP_004327860.1| serine--tRNA ligase [Prevotella denticola F0289] gi|326945210|gb|AEA21095.1| serine--tRNA ligase [Prevotella denticola F0289] Length = 429 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 147/422 (34%), Positives = 239/422 (56%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+ E +L D R +K++ + ++N S Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFVGAREAVEKVLEYDRLRRETQQKLDTNKQKQNQLSRQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG D++K E + LK L++ + + ++ IPNVP ++VP G Sbjct: 61 IGGLMREGRKDEADSIKEEVAQLKSADKALQEIMDKAQKDMTDVLFTIPNVPNDDVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N++++ G+KP ++ H+++ + L+DFD K++GA F + G +A +RA Sbjct: 121 DASDNVVVKEGGRKPDLPADAQCHWDLLKKFNLVDFDLGVKITGAGFPLYIGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY EV PL+V ++ GTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPLVVNQDSGLGTGQLPDKEGQMYHANLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI++ + LP++ + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 TNIFRDEILDEQDLPVKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ML E +LK+L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 ASLNEMLEHVEGLLKKLELPYHILRLCGGDMSFTSAICYDFEVWSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R++ RYR + K ++ HTLNGS +A+ R + AI+EN +G + +P VL PY Sbjct: 360 ESYQANRLHCRYRHADDKKIELCHTLNGSALALPRIVAAIIENNQTPEG-IRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|72160435|ref|YP_288092.1| seryl-tRNA synthetase [Thermobifida fusca YX] gi|123630454|sp|Q47TZ5|SYS_THEFY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|71914167|gb|AAZ54069.1| seryl-tRNA synthetase [Thermobifida fusca YX] Length = 422 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 152/427 (35%), Positives = 239/427 (55%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ L + + R + + +L LD ++R + + E +RA + S + Sbjct: 1 MIDLRALREDPDRLRASQRARGEDESVVDRLLDLDSRHRAALARFETLRAEQKSVGKSVS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A A +AL N +L ++ E E + L L+ +PNV E Sbjct: 61 RASA----EEREALLNRAKSLASEVKSAEAEAEALSDELTTLLRSVPNVV-ESDAPVGGV 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +++ VG R+H E+GE LG +D +R K+SGARF LTG A LE L Sbjct: 116 DDFVVVEEVGTPRQFDFTPRDHLELGEMLGAIDTERGAKVSGARFYFLTGVGALLELGLL 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 + +G+T + P+LV+ E M GTG + + A +++ D +L+ TSEV L Sbjct: 176 NLAMQRAV-ANGFTPMIPPVLVKPETMDGTGFLGEHAAEVYHLPADDLYLVGTSEVPLAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +++EI+ + +LP R+ + FR EAGS G+DTRG++R HQF K E+ +++ E Sbjct: 235 YHANEILPADALPTRYIGWSSCFRREAGSYGKDTRGIIRVHQFNKVEMFVYAHPDEAHEE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L+ E+L +++ YRVV + GDLG SA + YD E WL Q YRE++S S C Sbjct: 295 HLRLLAWEREMLDLIEVPYRVVDIAAGDLGTSAARKYDCEAWLPSQGRYRELTSTSNCTE 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQSRR+N RYRD + K +F TLNG+ +A R ++AILEN+ DGSV +P LRP++ Sbjct: 355 FQSRRLNIRYRDTDGK-PRFVATLNGT-LATTRWIVAILENHQQEDGSVVVPEALRPFV- 411 Query: 419 NLAVIKK 425 V+ Sbjct: 412 GQDVLHP 418 >gi|283457193|ref|YP_003361762.1| seryl-tRNA synthetase [Rothia mucilaginosa DY-18] gi|283133177|dbj|BAI63942.1| seryl-tRNA synthetase [Rothia mucilaginosa DY-18] Length = 435 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 157/437 (35%), Positives = 238/437 (54%), Gaps = 19/437 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI +R+NP+ + + R + + IL D R LI + E++RA +N+ ++ Sbjct: 1 MIDINLLRENPDVFRASQRARGKDETHVDRILEADTARRALIGEYENLRAEQNAFGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E +LV K + + E E + E +LIS I N+ ++ VP G Sbjct: 61 KAPKEEKPALVAQAKELAARVNEAKAASEAKTAEYE----ELISSIENLIIDGVPTGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + R+H EIGE + +D R K+SGARF L G +A LE+A Sbjct: 117 DYVVVKKVGTPRDFTADGFEPRDHLEIGELVDGIDMARGAKVSGARFYFLKGQVARLEQA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L +DL T EHG+T ++ P LVR E M GTG K D+++ D +L+ TSEV+L Sbjct: 177 LMWMALDLAT-EHGFTMMTTPTLVRPEIMNGTGFNVKHDDEIYRLERDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 ++ EI++ + ++ + +R EAGSAG+DTRG++R HQF K E+ E + Sbjct: 236 AGYHTDEILDFEKGAKKYLGWSSCYRREAGSAGKDTRGIIRVHQFNKAEMFVYCPVEQAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++LS EE+L+R L YRV+ GDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 EMHDKLLSLEEEMLQRCGLAYRVIDTAAGDLGTSAARKFDCEAWVPTQGTYRELTSTSNC 355 Query: 357 GNFQSRRMNSRYRDPN---------SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 +Q+RR+N R R P+ + TLNG+ +A R ++AILE + ADGSV Sbjct: 356 TTYQARRLNIRERTPDTVDEAGNVRKGRTRSVATLNGT-LATTRWVVAILETHQQADGSV 414 Query: 408 TIPTVLRPYMNNLAVIK 424 IP LRPYM VI Sbjct: 415 RIPEALRPYMGGAEVIP 431 >gi|86740088|ref|YP_480488.1| seryl-tRNA synthetase [Frankia sp. CcI3] gi|86566950|gb|ABD10759.1| seryl-tRNA synthetase [Frankia sp. CcI3] Length = 420 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 151/426 (35%), Positives = 236/426 (55%), Gaps = 9/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR+NP+ + A+ + ++ + +L LD NR L ++++ +ARR S + Q Sbjct: 1 MLDKRFIRENPQAVKDAVAAKGIDLDVDELLQLDRDNRKLQFEVDEAQARRKSFAKQFAG 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L+ E QL L ++ L +L+ +P +P P+G + Sbjct: 61 A----DAARRAELRAEHEAFDRQLKDLREQLARTGGRLSELMLLVPGIPWSGAPVGADES 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+++R+VG+ P +H + E G +F RA +++G R L G + LERA+ Sbjct: 117 ANVVLRTVGEPPEFDFTPLDHTALAEKRGWAEFARARRVAGERAYALVGDMVMLERAVHS 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 + +DL +T VS P LVR+E + GTG +PK ++++ D +L T+EV+L L Sbjct: 177 YALDL-LRGLDFTPVSVPALVREEPLVGTGMLPKAREEIYAIPADDLYLAGTAEVALVGL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFT 297 ++ EI++ LP+R+ ++P FR E GSA RD RG+LR HQF K E + ++ S Sbjct: 236 HAGEILDVGRLPIRYAGISPCFRREIGSASRDVRGLLRVHQFEKVEQFVLCAADEAESAR 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H +L+ AE IL L L Y VV TGD+G + D+ W +RE SCST Sbjct: 296 WHAELLATAERILSDLGLCYEVVECATGDMGVGKFRMNDINTWFPSLGRFRETHSCSTLH 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RYRD + +++F HTLN + VA R L A+LEN+ ADG V +P VLRPY+ Sbjct: 356 DWQARRANLRYRDTDG-TVRFAHTLNNTAVATPRLLAALLENFQTADGEVRVPKVLRPYL 414 Query: 418 NNLAVI 423 +I Sbjct: 415 GGRELI 420 >gi|257437753|ref|ZP_05613508.1| serine--tRNA ligase [Faecalibacterium prausnitzii A2-165] gi|257199768|gb|EEU98052.1| serine--tRNA ligase [Faecalibacterium prausnitzii A2-165] Length = 443 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 135/442 (30%), Positives = 228/442 (51%), Gaps = 17/442 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NP+ + +KK+ + P + ++ D K R +K++E ++A RN S Sbjct: 1 MLDIKFVRDNPDAVKENIKKKFQDAKLPLVDEVIEKDAKYRECLKEVESLKAARNKLSKA 60 Query: 58 ----IGQAIAEGNLSLVDALKNE-------TSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 GQ + + L+ + +++ LE EE ++ +++++ IP Sbjct: 61 NGPLFGQLKKCTDEAQKAQLQAQIDANNAAVKADADKMAELEAEEAKLADRIQEIMYTIP 120 Query: 107 NVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 + VPIG N+ + G+ H EI E+ +D D A +++G F Sbjct: 121 QMIDPSVPIGPDDTYNVEAQRFGEPVVPDFPIPYHTEIMESFDGIDMDAAGRVAGNGFYY 180 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DG 225 L G++A L A+ + D + G+T V P ++ + G P+ M+ + Sbjct: 181 LLGNIARLHEAVLAYARDFMI-DKGFTYVIPPFMMHGNVVQGVMSFPEMDAMMYKIEGED 239 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LI TSE ++ + + ++ +LPL T+ +P FR E G+ G + RG+ R HQF K E Sbjct: 240 LYLIGTSEHTMIGRFIDQTLDEATLPLTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQE 299 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 ++ + R E+S +E++ + E+ + +++ R ++ C+GDL K+ D+E W Q Sbjct: 300 MIVVCRPEESADWYEKLWKNSVELFRSMEIPVRQLNCCSGDLADLKVKSCDIEAWSPRQQ 359 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 Y E+ SCS G+ Q+RR++ R + + K HTLN + VA R LIA LEN+L ADG Sbjct: 360 KYFEVCSCSNLGDAQARRLHIRVKGKDGK-TYLAHTLNNTCVAPPRMLIAFLENHLQADG 418 Query: 406 SVTIPTVLRPYMNNLAVIKKEH 427 SVTIP VL+PYM L V+ H Sbjct: 419 SVTIPKVLQPYMGGLEVMVPTH 440 >gi|237752023|ref|ZP_04582503.1| seryl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229376590|gb|EEO26681.1| seryl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 425 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 182/428 (42%), Positives = 264/428 (61%), Gaps = 15/428 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + + + L KR++E E + + +E+++A +N+ + Sbjct: 1 MIDLKLLVNDFNAVVEKLSKRNIEATLLETLRQSSLNYKQKKIALEELQAEQNAKTKLFA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + EG ++ALK E LK ++ + KE + L++L IPN+P + P G Sbjct: 61 KYKQEGG--DINALKIECDGLKTKIDLYAKELEVWENQLQELTHNIPNIPDSKTPFGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ ++ V + P +EH+E+ E G +DF+R KL+ +RFSV G A LERAL Sbjct: 119 SDNVELKKVLEIPQFDFKPKEHWELAEQNGWIDFERGVKLAKSRFSVFMGMGAKLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----------DGRWLI 229 +M+D + S G++EV P++ + ++GTGQ+PKF +D+F + +LI Sbjct: 179 NYMLDFN-SARGFSEVGTPVIANAQTLFGTGQLPKFEEDLFKISDFKDEESGKGHALYLI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+E +LTNLYS EI++ LP+ T P FR EAGSAGRDTRG++RQHQF K ELV++ Sbjct: 238 PTAEATLTNLYSDEILKEDMLPVMLTAYTPCFRKEAGSAGRDTRGIIRQHQFDKVELVAL 297 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T +DS ERM++CA E+L L L +R+V LC GDLGFSA T D+EVWL GQN YRE Sbjct: 298 TMPQDSDMMQERMIACASELLVSLGLPHRLVQLCGGDLGFSASNTVDIEVWLPGQNCYRE 357 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISS S +FQ+RR RY+D N K++ HTLNGS +AVGR L+AI+ENY NADGS+ I Sbjct: 358 ISSISNTRDFQARRAKIRYKDSNKKNV-LVHTLNGSSLAVGRTLVAIMENYQNADGSINI 416 Query: 410 PTVLRPYM 417 P VL PY+ Sbjct: 417 PPVLEPYL 424 >gi|298372889|ref|ZP_06982879.1| serine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] gi|298275793|gb|EFI17344.1| serine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] Length = 424 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 152/427 (35%), Positives = 237/427 (55%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I +N + + L K+H E I+ LD++ R K+++ A +N + Q Sbjct: 1 MLTLKNIIENRQAVVEGLHKKHFAEAEKVIVEIIDLDKERRNTQKELDTALAEQNRIAKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG I +G S +A K +T+ KEQ +L + +E L+ + +PN+P E VP G Sbjct: 61 IGALIGQGKRSEAEAAKEQTARYKEQSKLLGDKLNEYEKMLRDKLLQVPNLPHESVPEGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +A +N R+ G P + H+E+ + L+DF+ K++GA F V G A L+RA Sbjct: 121 TAEDNKTERTGGVVPDMPTDALPHWELAKRYDLIDFELGVKITGAGFPVYKGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L F +D GY E+ P +V ++ YGTGQ+P M+ T D +LIPT+EV + Sbjct: 181 LINFFLDE-ARNAGYLEIEPPYVVNTDSGYGTGQLPDKEGQMYHVTVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ I+ K LP + T + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 TNIFRDVILAEKDLPCKLTAYSACFRREAGSYGKDVRGLNRLHQFNKVEIVRIDKPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + M+ E ++ +L+L YR++ LC GD+ F++ T+D EV+ A Q + E+SS S Sbjct: 300 DSLDEMVRYVENLICKLELPYRILRLCGGDMSFTSSLTFDFEVFSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RY+ K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 ESYQANRLKCRYKTAEGK-TELCHTLNGSALALPRIVAALLENNQTPNG-IRIPKTLVPY 417 Query: 417 MNNLAVI 423 +I Sbjct: 418 C-GFEII 423 >gi|320335112|ref|YP_004171823.1| Seryl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319756401|gb|ADV68158.1| Seryl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 422 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 148/426 (34%), Positives = 239/426 (56%), Gaps = 9/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + A++ + + + +L +D + L ++E ++A RN+N+ + + Sbjct: 1 MLDLKFIRDNADTVRHAIQVKGVPLDLDELLRVDRELVELRARLETLQAERNANAKLVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A AL L E++ E +LK+L+ +PN+P VP+G + Sbjct: 61 AGA----DERAALIARGKDLAEEIRAQEPALRAHEDALKQLLLRVPNIPHPSVPVGRDDS 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G P+ +H ++ E G D +R ++SG+R +L G LE+A+ Sbjct: 117 ENVELRREGTLPTFSFTPLDHVQLLEKHGWADLERVARVSGSRSYLLKGDAVRLEQAIIN 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 + +D ++ G+T VS LVR + + GTG P D ++ L T+EV + +L Sbjct: 177 YALDT-LADAGFTLVSTTALVRPDTLVGTGHFPGGEDQVYKIEGADLMLAGTAEVPVNSL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF--T 297 ++ E++ LP+ + ++ +FRSEAGSAGRD RG++R H+F K E ITR +++ Sbjct: 236 HAGEVLAEADLPVTYAAISAAFRSEAGSAGRDVRGLMRVHEFKKVEQYVITRADEAEGLA 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 ER+L AE IL+ L+L YRV+ CTGD+G YDLE W+ + YRE SCS G Sbjct: 296 MFERLLGNAETILRGLELPYRVLQNCTGDMGAGKVLMYDLECWVPSEEKYRETHSCSYLG 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR RYRD + ++F HTLN +G+A R L+ LE + ADG+V +P LRPY+ Sbjct: 356 DWQARRTGIRYRDEAGR-MQFPHTLNNTGIASPRILVPFLEVHQQADGTVRVPAALRPYL 414 Query: 418 NNLAVI 423 V+ Sbjct: 415 GGREVL 420 >gi|227501878|ref|ZP_03931927.1| seryl-tRNA synthetase [Corynebacterium accolens ATCC 49725] gi|227077372|gb|EEI15335.1| seryl-tRNA synthetase [Corynebacterium accolens ATCC 49725] Length = 418 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 150/428 (35%), Positives = 246/428 (57%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + R +P + +L+ DEK R+ I+K +++R+++ S +IG Sbjct: 1 MIDLKLLRENPDVVRASQVTRGEDPSLVDQLLAADEKRRLAIQKADEVRSQQKSLGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L LK ++ E+ +++++L I NV Sbjct: 61 QASPEERPA----LLEGADELKAKVKEAEEARSAAEATVEELQYKIDNVVEGAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +L+ VG+ P ++H E+GE+LGL+D R K+ GARF LTG A L+ + Sbjct: 115 DDFVLVEEVGEIPHFDFEPKDHLELGESLGLIDVKRGAKVGGARFYYLTGDGAFLQLGML 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 E G+ + P+LVR E M GTG + + +D+++ D R+L+ TSEV+L Sbjct: 175 MLAAQ-KAREAGFQLMIPPVLVRPEIMSGTGFLGQHSDEIYYLPADDRYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ + PL++ + FR EAGS G+DTRG+LR HQF K E+ + ED+ Sbjct: 234 YHKDEIIDLSNGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVYCKPEDAEDM 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+++L +E+L ++L YR + + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HQKLLDMEKEMLAAMELPYRTIDIAGGDLGSSAARKFDNEAWVPTQGTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+++RYRD + K + TLNG+ +A R ++AILEN+ ADGSV +P LRP++ Sbjct: 354 FQARRLSTRYRDESGK-TQVAATLNGT-LATTRWIVAILENHQQADGSVVVPEALRPFV- 410 Query: 419 NLAVIKKE 426 V+ + Sbjct: 411 GKDVLTPQ 418 >gi|86149043|ref|ZP_01067275.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597260|ref|ZP_01100495.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|148926480|ref|ZP_01810163.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486] gi|218562047|ref|YP_002343826.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|30173219|sp|Q9PIB3|SYS_CAMJE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|85840401|gb|EAQ57658.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190321|gb|EAQ94295.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|112359753|emb|CAL34539.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145844643|gb|EDK21749.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486] gi|284925660|gb|ADC28012.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902] Length = 411 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 259/419 (61%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKIALEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A ++LK + S K ++ + + + + L+++ IPN+P E VP+G Sbjct: 61 TA------EDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+ ++ V PS +EHFE+GE+L +DF R K+S +RF VL A L RAL Sbjct: 115 NENVELKKVLNPPSFDFTPKEHFELGESLNWLDFMRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + G+ V+ P LV M+GTGQ+PKF +DM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S++LP++ T + FR EAGSAGRDTRG++RQHQF K ELVSIT+ E S + Sbjct: 234 LYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN YREISS S C + Sbjct: 294 FNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP VL+ Y Sbjct: 354 FQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKYF 411 >gi|326802560|ref|YP_004320379.1| seryl-tRNA synthetase [Sphingobacterium sp. 21] gi|326553324|gb|ADZ81709.1| seryl-tRNA synthetase [Sphingobacterium sp. 21] Length = 423 Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats. Identities = 155/421 (36%), Positives = 238/421 (56%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I +IR+N E + L+ R+ + ++ LDE R + + E I A N+ + QI Sbjct: 1 MLQISYIRENREDVIKRLQVRNFGQLELVDEVIRLDEDIRSIKTRSESIAAEGNAAAKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ + +G + +K + KEQL +L +E + + I +PN+P ++VP+G + Sbjct: 61 GELMRQGKREEAEEIKTRSGEYKEQLKVLNEELGSLEEQFFQKIVQLPNLPYKDVPMGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N ++ G+KP + H+E+ ++DF+ K+SGA F V G A L+RAL Sbjct: 121 AEDNEIVLEHGEKPVLPENALPHWELAAKYDIIDFELGVKVSGAGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 F +D E+GY EV P+L+ ++ +GTGQ+P M+ T D +LIPT+EV +T Sbjct: 181 INFFLD-QAIENGYREVQVPILINGDSGFGTGQLPDKEGQMYYVTDDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y EI++ + P++ T P FR EAGS G RG+ R HQF K ELV I E S+ Sbjct: 240 NMYRGEILKEEDFPIKNTAYTPCFRREAGSYGAHVRGLNRLHQFDKVELVQIVHPEKSYD 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M + +L++L L YRV+ LC GD+GF++ TYD+EVW Q + E+SS S Sbjct: 300 VLEEMSKYVQSLLQKLQLPYRVLRLCGGDMGFASAMTYDMEVWSGAQQRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQS R+ +R++ + K + HTLNGS +A+ R + ILE G + +P+VL PY Sbjct: 360 TFQSNRLKARFKGQDGK-MHLAHTLNGSALALPRIVACILEENQTDQG-IKVPSVLVPYT 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|149179060|ref|ZP_01857633.1| seryl-tRNA synthetase [Planctomyces maris DSM 8797] gi|148842100|gb|EDL56490.1| seryl-tRNA synthetase [Planctomyces maris DSM 8797] Length = 426 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 148/425 (34%), Positives = 234/425 (55%), Gaps = 11/425 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+Q+I +N E + + R +E E + LD++ R LI + +++R + S S+QI + Sbjct: 1 MLDLQFICENQEVILENCRNRGIEVDLEQLSKLDQRRRELIVQGDNLRQEQKSVSSQIPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + L + L+EQ+ +E E EV S LK + +PN+ +VP+G Sbjct: 61 A---ADNDARQPLIAQGKELREQISAIEIELREVESLLKSEQARVPNLAHPDVPVGKEDK 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N ++R G+KP+ +H + E L+DF+ T+++G F L LE AL Q Sbjct: 118 ANTVVRMWGEKPAFEFTPLDHVALAEKHDLIDFEAGTRVAGHGFYYLKNEAVLLEMALCQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 + + + G+ S P L R E + G G P+ + L+ T+E++L Sbjct: 178 YAMQ-KLVQEGFVLHSTPDLARKEILEGIGFNPRGDETQIYSVENTDLSLVATAEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SF 296 +I++ ++LP + L+ FR+EAG+ G+ TRG+ R HQF K E+ + T + S Sbjct: 237 SMKDQIMDRETLPYKIAGLSHCFRTEAGAHGKATRGIYRVHQFSKVEMFAFTEPTNAASD 296 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN---LYREISSC 353 HE ++ EEI + L LHYRVV CTGDLG A + YDLE W+ G+ Y E++S Sbjct: 297 KMHEEIVRIEEEIFQGLGLHYRVVDTCTGDLGAPAYRKYDLEAWMPGRGDAGEYGEVTSA 356 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C ++QSRR+ +R + K +F HTLNG+ V++ R +IA+LENY ADG++ +P VL Sbjct: 357 SNCTDYQSRRLGTRCKSSGQKGTEFVHTLNGTAVSIARAIIAVLENYQQADGTILVPEVL 416 Query: 414 RPYMN 418 RP++ Sbjct: 417 RPWIG 421 >gi|302346704|ref|YP_003815002.1| serine--tRNA ligase [Prevotella melaninogenica ATCC 25845] gi|302150536|gb|ADK96797.1| serine--tRNA ligase [Prevotella melaninogenica ATCC 25845] Length = 429 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 148/422 (35%), Positives = 235/422 (55%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H + E +L D R +K++ + ++N S Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFKGAREAVEKVLEYDRLRRETQQKLDTNKQQQNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG D +K E + LK L++ + ++ IPN+P E VP G Sbjct: 61 IGGLMKEGKKDEADKIKEEVALLKSSDKALQEIMDMAQKDMTDVLLTIPNIPNEIVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++++ G+KP+ + H+++ + L+DFD K++GA F + G +A +RA Sbjct: 121 DAEDNVVVKEGGEKPNLPADALCHWDLLKKFNLVDFDLGVKITGAGFPLYIGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY EV PL+V E+ TGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPLVVNQESGQATGQLPDKEGQMYHANLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI+ + LP++ + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 TNIFRDEILNEQDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ML E +LK+L+L Y ++ LC GD+ F+A YD EVW A Q + E+SS S Sbjct: 300 QSLDEMLDHVEGLLKKLELPYHILRLCGGDISFTAALCYDFEVWSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R++ R+R K ++ HTLNGS +A+ R + AI+EN +G + +P VL PY Sbjct: 360 ESYQANRLHCRFRHAEDKKIELCHTLNGSALALPRIVAAIIENNQTPEG-IRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|188518695|ref|ZP_03004122.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188997689|gb|EDU66786.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] Length = 418 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 174/418 (41%), Positives = 255/418 (61%), Gaps = 4/418 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI IR++ + + + + + I LD R L+++ +++ A++N S +IG Sbjct: 1 MFDINLIRKDIVVIKEKMLNKKVSSDLFDQIFGLDVLVRNLMQQEQNLNAKKNQLSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + + +++K +L + L KL+ IPN+P + VPIG Sbjct: 61 IL-AKNKDPKLQQTLDLVNSIKSELQDISLTLSNKQDELNKLLLVIPNMPDDSVPIGNDE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+ V + H+++ L+DFD++TK++G+RF + T A L RAL Sbjct: 120 NDNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLYRALQ 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 QF +D++ + G+ E+ AP++V E++ G+G +PKF DD+F +L PT+EV LTN Sbjct: 180 QFCLDMNV-KAGFNEIWAPVIVNQESLIGSGNLPKFVDDLFKLENSNYYLSPTAEVQLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ +EI+++ LPL +T L P FRSEAGSAGRD RG++RQHQF K ELV + + EDSF E Sbjct: 239 LHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L+L YR ++LCTGDLGFS+ KTYDLEVWL N Y+EISSCS C N Sbjct: 299 LESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTN 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR RY++ + HTLNGS +A+ R A++ENY DGS+TIP L Y Sbjct: 359 FQARRAKIRYKETVDAPTELVHTLNGSSLAIDRLWAAVVENYQQEDGSITIPKALEKY 416 >gi|121613220|ref|YP_001000100.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|167005058|ref|ZP_02270816.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|166228636|sp|A1VYA9|SYS_CAMJJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|87250089|gb|EAQ73047.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] Length = 411 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 178/419 (42%), Positives = 258/419 (61%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTALEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A ++LK + S K ++ + + + + L+++ IPN+P E VP+G Sbjct: 61 TA------EDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ ++ V S +EHFE+GE+L +DF R K+S +RF VL A L RAL Sbjct: 115 DENVELKKVLNPSSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + G+ V+ P LV M+GTGQ+PKF +DM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S++LP++ T + FR EAGSAGRDTRG++RQHQF K ELVSIT+ E S + Sbjct: 234 LYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN YREISS S C + Sbjct: 294 FNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP VL+ Y Sbjct: 354 FQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKYF 411 >gi|242310618|ref|ZP_04809773.1| seryl-tRNA synthetase synthetase [Helicobacter pullorum MIT 98-5489] gi|239523016|gb|EEQ62882.1| seryl-tRNA synthetase synthetase [Helicobacter pullorum MIT 98-5489] Length = 431 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 179/434 (41%), Positives = 264/434 (60%), Gaps = 21/434 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + + E++ L KR+++ E + + +E+ +A +NS + Sbjct: 1 MIDLKLLVNDFENVVQGLSKRNIDEVFLETLRQTHLNYKQKKIALEEKQALQNSKTKLFA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q EG + LK E LK ++ + +E L++L IPN+P + P G Sbjct: 61 QYKQEGK--DIQELKKECDLLKAEISLYTQESQMWEEKLQELSYMIPNIPDSKTPFGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+ + + + +EH+E+ E G +DF+R KL+ +RFSV G A LERAL Sbjct: 119 NDNVEIKKILEPKTFSFSPKEHWELAEKNGWIDFERGVKLAKSRFSVFMGMGAKLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------------- 223 +M+D +T + G++EV P++V + ++GTGQ+PKF +D+F + Sbjct: 179 NYMLDFNT-QRGFSEVGTPVIVNSQMLFGTGQLPKFENDLFKISDFDDEESQDSKEAKRG 237 Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 +LIPT+EV+LTNL+++EI++ + LPL T P FR EAGSAGRDTRG++RQHQF K Sbjct: 238 HELYLIPTAEVTLTNLHNNEILQEEELPLMMTAYTPCFRKEAGSAGRDTRGIIRQHQFDK 297 Query: 284 CELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAG 343 ELV+IT ++S ERM++CA +L L L +R++ LC GDLGFSA T D+EVWL G Sbjct: 298 VELVAITTPQESEMMQERMVACASALLTSLGLPHRLIQLCGGDLGFSASNTIDIEVWLPG 357 Query: 344 QNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 QN YREISS S +FQ+RR RY+D N K HTLNGS +AVGR L+AI+ENY Sbjct: 358 QNCYREISSISNTRDFQARRAKIRYKDAN-KKNHLVHTLNGSSLAVGRTLVAIMENYQQE 416 Query: 404 DGSVTIPTVLRPYM 417 DGS+ IP+VL+PY+ Sbjct: 417 DGSIEIPSVLQPYL 430 >gi|283955812|ref|ZP_06373303.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283792767|gb|EFC31545.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 411 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 177/419 (42%), Positives = 257/419 (61%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTALEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 ++LK + S K ++ + + + + L+++ IPN+P E VP+G Sbjct: 61 T------TEDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ ++ V PS +EHFE+GE+L +DF R K+S +RF VL A L RAL Sbjct: 115 DENVELKEVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + G+ V+ P LV M+GTGQ+PKF +DM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S++LP++ T + FR EAGSAGRDTRG++RQHQF K ELVSIT+ E S + Sbjct: 234 LYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN YREISS S C + Sbjct: 294 FNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP L+ Y Sbjct: 354 FQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDALKKYF 411 >gi|298291864|ref|YP_003693803.1| seryl-tRNA synthetase [Starkeya novella DSM 506] gi|296928375|gb|ADH89184.1| seryl-tRNA synthetase [Starkeya novella DSM 506] Length = 494 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 191/495 (38%), Positives = 252/495 (50%), Gaps = 72/495 (14%) Query: 1 MLDIQWIRQNPEHLDIALKKRH-----LEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 M DI+WIR+ P+ L AL +R + + +L+LDE+ R I K+E+++ARRN+ S Sbjct: 1 MHDIKWIREEPQGLVEALVRRGTVAAEAKTLVDGLLALDERRRSGIVKLEELQARRNAAS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG A G+ S + L E + LK +P LE + + L ++ IPN PL VP Sbjct: 61 KEIGAAKKAGDNSRAELLMAEVAALKTDIPALEGDVKAAEAELNGKLAAIPNAPLAIVPD 120 Query: 116 GTSANENILIRSV------GKKPSAIHLSREHF--------------------------- 142 GT ++N+ I V P E Sbjct: 121 GTDEHDNVEIAKVGEKRSLAFAPKQHFELGEALGQMDFELAAKLSGARFVVLKNRLARLE 180 Query: 143 ---------EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 E G + ++ I T + Y Sbjct: 181 RAIGQFFIDTHTEEHGYTEVAPPILVNDEAMFGTAQLPKFRNDQFRADAIVEATHDWDYF 240 Query: 194 EVSAPLL--VRDEAMYG---------------------TGQIPKFADDMFCTTDGRWLIP 230 P L + + T D M WLIP Sbjct: 241 REKYPELRATWRDILNARLGAEQDKVDGLVHELSGRLSTEDWAALHDAMSG--RNLWLIP 298 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV LTNL I+ + LPLRFT L P FR+EAGSAGRDTRGM+RQHQF K E+VSIT Sbjct: 299 TAEVPLTNLVRESILSEEELPLRFTALTPCFRAEAGSAGRDTRGMIRQHQFNKVEMVSIT 358 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E S E ERML+CA+ +LK+LDLH+RVV+LCTGD+GF++ +T+D+EVWL GQN YREI Sbjct: 359 TPEASLDEQERMLACAQAVLKKLDLHHRVVTLCTGDMGFASARTFDIEVWLPGQNAYREI 418 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SS STC +FQ+RRMN+RYR +K +F HTLNGSGVAVGR ++AILENY N DGSVT+P Sbjct: 419 SSVSTCTDFQARRMNARYRPAGAKQPRFVHTLNGSGVAVGRAMVAILENYQNEDGSVTVP 478 Query: 411 TVLRPYMNNLAVIKK 425 VL PYM + I++ Sbjct: 479 DVLVPYMGEVRRIER 493 >gi|298345751|ref|YP_003718438.1| serine--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|304390549|ref|ZP_07372502.1| serine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235812|gb|ADI66944.1| serine--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|304326305|gb|EFL93550.1| serine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 443 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 151/430 (35%), Positives = 239/430 (55%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ ++ NPE + + R +P + L+ DE+ R + E RA + + S QIG Sbjct: 15 MIDLRAMKDNPEPMRASQLARGNDPATVDQALAADERRRAALTAFETARAEQKAFSKQIG 74 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E + L + L E + LE+ ++ KK + N+ L+ VP G Sbjct: 75 SASKEERPA----LLEQAKKLSENVKALEEASNQAAEEAKKAAMVLENLILDGVPSGGED 130 Query: 120 NENILIR---SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +L + + + ++H ++G L +D DR K+SGARF L G A LE Sbjct: 131 DYEVLSQEGAPIRDFTAEGFTPQDHLDLGIGLDAIDTDRGAKVSGARFYYLKGVGARLEL 190 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 A+ +D HG+T + P +V E M GTG + + +D+++ D +L TSEV+ Sbjct: 191 AILNAALDTAI-AHGFTPMITPCMVSPETMSGTGFLGEHSDEIYYLPADNLYLTGTSEVA 249 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L +++EII+ + P R+T + FR EAGS G+DTRG++R HQF K E+ S + ED+ Sbjct: 250 LAGYHTNEIIDLSAGPKRYTGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCKPEDA 309 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++L+ E+L +++L YR+++ GDLG SA + +D E WL QN + E++S S Sbjct: 310 VEEHQKLLNMEREMLAKVELPYRIINTAAGDLGSSAAQKFDCEAWLPTQNRFMEVTSTSN 369 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+ RYRD K + TLNG+ + R ++AILEN+ ADGSV +P LRP Sbjct: 370 CTTFQARRLQIRYRDTEGK-PQVCATLNGT-LGTTRWIVAILENHQQADGSVRVPAGLRP 427 Query: 416 YMNNLAVIKK 425 Y+ L V++ Sbjct: 428 YLGGLEVLEP 437 >gi|313112589|ref|ZP_07798248.1| seryl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310625085|gb|EFQ08381.1| seryl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 443 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 134/442 (30%), Positives = 229/442 (51%), Gaps = 17/442 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NP+ + +KK+ + P + ++ D K R +K++E ++A RN S Sbjct: 1 MLDIKFVRENPDAVKENIKKKFQDAKLPLVDEVIEKDAKYRACLKEVEALKAARNKLSKA 60 Query: 58 ----IGQAIAEGNLSLVDALKNE-------TSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 GQ + + L+ + +++ LEKEE + + +++++ IP Sbjct: 61 NGPLFGQLKKCTDEAQKAELQAQIDANNAAVKADADKMAELEKEEETLSARIQEIMYTIP 120 Query: 107 NVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 + VPIG N+ + G+ H EI E+ +D D A +++G F Sbjct: 121 QMIDPSVPIGPDDTYNVEAQRFGEPVVPDFPIPYHTEIMESFDGIDMDAAGRVAGNGFYY 180 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DG 225 L G++A L A+ + D G+T V P ++ + G P+ M+ + Sbjct: 181 LLGNIARLHEAVLAYARDFMI-NKGFTYVIPPFMMHGNVVQGVMSFPEMDAMMYKIEGED 239 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LI TSE ++ + + ++ +LPL T+ +P FR E G+ G + RG+ R HQF K E Sbjct: 240 LYLIGTSEHTMIGRFIDQTLDEATLPLTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQE 299 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 ++ + R ++S +E++ + E+ + +++ R ++ C+GDL K+ D+E W Q Sbjct: 300 MIVVCRPDESADWYEKLWKNSVELFRSMEIPVRQLNCCSGDLADLKVKSCDIEAWSPRQQ 359 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 Y E+ SCS G+ Q+RR++ R + + K HTLN + VA R LIA LEN+L ADG Sbjct: 360 KYFEVCSCSNLGDAQARRLHIRVKGKDGK-TYLAHTLNNTCVAPPRMLIAFLENHLQADG 418 Query: 406 SVTIPTVLRPYMNNLAVIKKEH 427 +VTIP VL+PYM L V+ H Sbjct: 419 TVTIPEVLQPYMGGLKVMVPTH 440 >gi|27904784|ref|NP_777910.1| seryl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29839436|sp|P59553|SYS_BUCBP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|27904182|gb|AAO27015.1| seryl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 432 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 171/434 (39%), Positives = 250/434 (57%), Gaps = 12/434 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+ +R + E + L +R + +++K +IL K+E++++R N+ S IG+ Sbjct: 1 MLNPNLLRNHIEFVFKNLARRGFSLDVKQFTEMEKKRKILQTKVEELQSRHNTLSKHIGR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +K TLK+++ +++KE + + + IPN+P +P G ++ Sbjct: 61 IKL--IHPNIQCMKERIITLKKKIDVMKKELKILLEQIHIFLMNIPNLPDINIPDGMGSD 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N + G + + H E+G L D+ A +SG+RF ++ G +A L R LGQ Sbjct: 119 DNQEVSRWGIIKNYNFKIKNHVELGNHLNGFDWKSAANISGSRFFIMKGKIALLYRVLGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC---------TTDGRWLIPT 231 FM+DLHT+EHGY E P LV+ +YGTGQ+P+F D+F + LIPT Sbjct: 179 FMLDLHTNEHGYLETYVPCLVKTNNLYGTGQLPRFKTDLFYAKSLLDESQNNNNFALIPT 238 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV LTNL+ I++ + LP+ P FRSEA S GRDT+G++R HQF K E+V I Sbjct: 239 AEVPLTNLFRDCILDEQQLPIMLVAKTPCFRSEALSYGRDTQGLIRTHQFDKVEIVQIVH 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 DS + E + AE +LK L L YR LCT D+GFS+ KTYDLEVW QN+YRE+S Sbjct: 299 PSDSMQKLEELTIHAERVLKLLKLPYRKTLLCTRDIGFSSSKTYDLEVWFPSQNVYREVS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS +FQ+RR+ +R+ F HT+NGSG+AVGR L AILENY DG + IP Sbjct: 359 SCSNMLDFQARRIKARFHCNAQNKKIFIHTINGSGLAVGRTLAAILENYQQKDGRIKIPK 418 Query: 412 VLR-PYMNNLAVIK 424 +LR YMN L ++ Sbjct: 419 ILRNNYMNGLEFLE 432 >gi|168051005|ref|XP_001777947.1| predicted protein [Physcomitrella patens subsp. patens] gi|162670707|gb|EDQ57271.1| predicted protein [Physcomitrella patens subsp. patens] Length = 461 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 144/450 (32%), Positives = 224/450 (49%), Gaps = 30/450 (6%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D ++IR N E + ++ R E ++ L E+ L ++++ +RA RN+ + Sbjct: 13 IDFKFIRDNKEAIAKNIQNRKCGGDVEQVVQLYEQTVSLNQEVDKLRAERNAVA---NAM 69 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + S + L + LK+Q+ LE E + L+ IPN+ +VP+G+ Sbjct: 70 KTKLDASRREELIEKGKQLKDQVSELEIELSLLQEKLQLEGQRIPNMTHPDVPVGSEDVA 129 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 L + VG + ++H E+G AL L DF+ A ++SG +F L LE AL + Sbjct: 130 -TLRKEVGSQRKFTFPVKDHVEVGLALDLFDFEAAAEVSGTKFYYLKNEAFLLEMALINW 188 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 + G+ +S P LVR + G P+ + L T+E+ + + Sbjct: 189 TMS-KLLPKGFIPMSTPDLVRSTVVEKCGFQPRGQNTQVYSVEGTDLCLAGTAEIPVGGM 247 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y ++ +LPL+ + FR+EAG+AG TRG+ R HQF K E+ I R E+S + H Sbjct: 248 YMDSMLPESALPLKIVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVICRPEESDSLH 307 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E ++S EE+ L LH++ + + T DLG A + YD+E W+ G Y EISS S C ++ Sbjct: 308 EELISIEEELYASLGLHFKTLDMSTEDLGAPAHRKYDVEAWMPGLGRYGEISSASNCTDY 367 Query: 360 QSRRMNSRYR----------------DPNSKS-------LKFTHTLNGSGVAVGRCLIAI 396 QSRR+N RYR +K +F HTLN + AV R +IAI Sbjct: 368 QSRRLNIRYRPAVVVATTAPSVPLQPPAKAKKVKNTLPPPRFAHTLNATACAVPRMMIAI 427 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 LEN DGSV IP LRP+M + VI+ + Sbjct: 428 LENNQQEDGSVIIPEALRPFMGGIDVIRPK 457 >gi|288802310|ref|ZP_06407750.1| serine--tRNA ligase [Prevotella melaninogenica D18] gi|288335277|gb|EFC73712.1| serine--tRNA ligase [Prevotella melaninogenica D18] Length = 429 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 148/422 (35%), Positives = 235/422 (55%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H + E +L D R +K++ + ++N S Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFKGAREAIEKVLEYDRLRRETQQKLDTNKQQQNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG D +K E + LK L++ + ++ IPN+P E VP G Sbjct: 61 IGGLMKEGKKDEADKIKEEVALLKSSDKALQEIMDMAQKDMTDVLLTIPNIPNEIVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++++ G+KP+ + H+++ + L+DFD K++GA F + G +A +RA Sbjct: 121 DAEDNVVVKEGGEKPNLPADALCHWDLLKKFNLVDFDLGVKITGAGFPLYIGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY EV PL+V E+ TGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPLVVNQESGQATGQLPDKEGQMYHANLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI+ + LP++ + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 TNIFRDEILNEQDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ML E +LK+L+L Y ++ LC GD+ F+A YD EVW A Q + E+SS S Sbjct: 300 QSLDEMLDHVEGLLKKLELPYHILRLCGGDISFTAALCYDFEVWSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R++ R+R K ++ HTLNGS +A+ R + AI+EN +G + +P VL PY Sbjct: 360 ESYQANRLHCRFRHAEDKKIELCHTLNGSALALPRIVAAIIENNQTPEG-IRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|78713171|gb|ABB50348.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] Length = 431 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 173/421 (41%), Positives = 254/421 (60%), Gaps = 8/421 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD + IR+NP ++ L R + +I L K + + +I +++ S IGQ Sbjct: 8 LDQKLIRENPTSVEENLSLRGKVYKISHIHELTVKKKEIDIEISSLQSESKKLSKLIGQV 67 Query: 62 IAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 IA+ N ++ LK + + ++ LE+++ + + I +PN +E PIG Sbjct: 68 IAKSQNTNSQELNDLKKRGNEYRIKISELEEKQRILDKQVDDEIYNLPNFSSKEAPIGKD 127 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N+ I++ G + H+EIGE+L + D ++TK+S +RF L G+ A LERAL Sbjct: 128 ESDNVQIKTWG-DTLIRENIKSHWEIGESLNIFDSVKSTKISKSRFITLIGNGAKLERAL 186 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSLT 237 FM+D+HT ++GY E+ P LV E++ G+GQ+PKF+ + C+ D WL PT+EV LT Sbjct: 187 INFMLDIHT-KNGYLELMPPALVNSESLRGSGQLPKFSNESFKCSNDDLWLSPTAEVPLT 245 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 + +EII+ K LP+++ +P FR EAGS GRDT+G++R HQF K EL S Sbjct: 246 AFHRNEIIDPKQLPIKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYWFCDPSKSLE 305 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H+++ S AE ILK+L+L YR+V +CTGDLGFS+ +T+DLEVWL YREISSCS C Sbjct: 306 AHKKITSDAESILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSSKCYREISSCSNCL 365 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR + R +K + HTLNGSG+A+GR + AILEN DGSV IP L PY Sbjct: 366 DFQARRSSIR--SKINKKNTYLHTLNGSGLAIGRTMAAILENGQQKDGSVKIPDALVPYF 423 Query: 418 N 418 Sbjct: 424 G 424 >gi|57239182|ref|YP_180318.1| seryl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58579140|ref|YP_197352.1| seryl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|81819249|sp|Q5HB76|SYS_EHRRW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|57161261|emb|CAH58182.1| seryl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58417766|emb|CAI26970.1| Seryl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 427 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 213/429 (49%), Positives = 281/429 (65%), Gaps = 5/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI +I+ NPE D A++ R+ + I+ L + + ++ ++ RN+ + +I + Sbjct: 1 MHDIDFIKNNPELFDEAMQNRNFGKIAHKIIELSANKKHTLTQLYSLQKERNNITQEIEK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + D + + +++ + + S L L++ +PN+P ++VPIG N Sbjct: 61 LKK--DNIQCDTQIELSKEITKKINHIN-NMIKTDSELIDLLNILPNIPDKKVPIGKDEN 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI IR GKK + H+E+GE L LMDF +A KLSG+RF +L LA L+RAL Sbjct: 118 DNIEIRRYGKKVDFKFPPKTHYELGENLNLMDFKQAAKLSGSRFVILKSQLAQLDRALAN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D+HT E GY+E+S P+LV + AMYG GQ+PKFADD F TTD LIPTSEV+LTNL Sbjct: 178 FMLDVHTQEFGYSEISHPVLVHESAMYGVGQLPKFADDSFKTTDNFRLIPTSEVALTNLV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S+ + LP+R T + FRSEAGSAG+D RGM+RQHQF K ELVSI EE S E E Sbjct: 238 SNTNTNANELPIRLTACSQCFRSEAGSAGKDVRGMMRQHQFNKVELVSIVTEEQSELELE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM AEEILK+L+L YRV+ LCTGDLGFSA TYD+EVW+ QN YREISSCS C FQ Sbjct: 298 RMTQVAEEILKKLELPYRVMMLCTGDLGFSASITYDIEVWIPSQNQYREISSCSNCKAFQ 357 Query: 361 SRRMNSRYRD--PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +RRMN++Y +K KF HTLNGS +A+GR +IAILENY N DGS+TIP VLR YMN Sbjct: 358 ARRMNAKYHTISNGNKVNKFVHTLNGSALAIGRTIIAILENYQNQDGSITIPHVLRKYMN 417 Query: 419 NLAVIKKEH 427 N +IK + Sbjct: 418 NQDIIKNNN 426 >gi|325474958|gb|EGC78144.1| seryl-tRNA synthetase [Treponema denticola F0402] Length = 422 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 146/427 (34%), Positives = 245/427 (57%), Gaps = 10/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I++N E + +K RH+ ++ + L +K L+ +++++ RN NS + Sbjct: 1 MLDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSM-- 58 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + L ++ +KE++ +E E E +L + +S IPN+ E P+G + Sbjct: 59 -KQKLSPEERQKLVDQGKAIKEKIAQVEAELAETEKALHEAVSKIPNMAHPEAPVGKEDS 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G P ++H ++G+ L L+DF+ TK+SG +F L LE+AL Sbjct: 118 DNLEVKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTM 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 + +++ +HG+ P + ++E +YG G P+ + +G L+ T+E++L Sbjct: 178 YGLNI-LRKHGFKPFITPDIAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EII+ +SLPL++ L+ FR EAG+AG+ ++G+ R HQF K E+ E+S Sbjct: 237 YHSDEIIKKESLPLKYCGLSHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDAL 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN--LYREISSCSTC 356 HE + EEI L + +RVV CTGDLG A + +DLE W+ G+N + E++S S C Sbjct: 297 HEELRLIEEEIFNGLGIPFRVVDTCTGDLGAPAYRKWDLEAWMPGRNGGEWGEVTSTSNC 356 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+RR+N RY+D + K+ KF HTLNG+ +A+ R +IA+LENY ADGS+ IP L PY Sbjct: 357 TDYQARRLNIRYKDDDGKN-KFLHTLNGTALAMSRAMIAVLENYQQADGSIKIPEALVPY 415 Query: 417 MNNLAVI 423 I Sbjct: 416 C-GFDRI 421 >gi|58584721|ref|YP_198294.1| seryl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|67461610|sp|Q5GSH2|SYS_WOLTR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|58419037|gb|AAW71052.1| Seryl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 425 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 213/427 (49%), Positives = 293/427 (68%), Gaps = 4/427 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI++IRQN E + A++ R + E +E IL +D K R+L K++D+ +RN + +I Sbjct: 1 MHDIEYIRQNSEEFEKAMESRGMKEFSAEEILKVDHKKRLLTTKLQDLNRQRNEITKKIK 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + S + + + ++ + +E L ++S +PN+P++ VPIG Sbjct: 61 ELKMS--KSPCEKQIKSSKNITNEIEAISLKEQMEKDKLVNILSNLPNIPVQGVPIGAGE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N N+ +R +K + + H+E+GE LGLMDF++A K+SG+RF++L G LA L RAL Sbjct: 119 NSNLEVRRYREKRQFDFVPKSHYELGERLGLMDFEQAAKISGSRFAILKGQLAKLGRALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 FM+++H +E GYTEV P+LV++EAMY GQ+PKF+DD + TTD LIPT EV LTN Sbjct: 179 NFMLEMHVNEFGYTEVYHPVLVKNEAMYNVGQLPKFSDDSYLTTDELRLIPTGEVVLTNS 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + +I+E K LP+RFT + FR EAGSAG+ TRGM+RQHQF K ELVSIT E+ S E Sbjct: 239 VADKIVEEKKLPIRFTAYSECFRKEAGSAGQSTRGMIRQHQFGKVELVSITTEDQSNDEL 298 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ERM AEEILKRL+L YRV+ LC+GD+GF+A KTYD+EVWL QN YREISSCS CGNF Sbjct: 299 ERMTGVAEEILKRLELPYRVILLCSGDMGFAAQKTYDIEVWLPEQNRYREISSCSNCGNF 358 Query: 360 QSRRMNSRYR-DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RRMN++Y + N K K+ HTLNGS +A+GR +IA++ENY N DGS+TIP VL+ Y++ Sbjct: 359 QARRMNAKYSLEANKKVKKYVHTLNGSALAIGRTIIAVMENYQNPDGSITIPNVLQKYIS 418 Query: 419 NLAVIKK 425 N VI K Sbjct: 419 NGTVISK 425 >gi|315929261|gb|EFV08477.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305] Length = 411 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 259/419 (61%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKIALEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A ++LK + S K ++ + + + + L+++ IPN+P E VP+G Sbjct: 61 TA------EDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+ ++ V PS +EHFE+GE+L +DF R K+S +RF VL A L RAL Sbjct: 115 NENVELKKVLNPPSFDFTPKEHFELGESLNWLDFMRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + G+ V+ P LV M+GTGQ+PKF +DM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S++LP++ T + FR EAGSAGRDTRG++RQHQF K ELVSIT+ E S + Sbjct: 234 LYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN YREISS S C + Sbjct: 294 FNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP VL+ Y Sbjct: 354 FQARRSKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKYF 411 >gi|325675174|ref|ZP_08154860.1| serine--tRNA ligase [Rhodococcus equi ATCC 33707] gi|325554135|gb|EGD23811.1| serine--tRNA ligase [Rhodococcus equi ATCC 33707] Length = 421 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 147/425 (34%), Positives = 242/425 (56%), Gaps = 11/425 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++++R+NP+ + + + R +P + +L D R I + +RA + + ++GQ Sbjct: 4 IDLKFLRENPDAVRTSQRTRGEDPGLVDALLEADASRRAAILAGDTLRAEQKAFGKKVGQ 63 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E + L + L +++ E +HE + L + I N+ + P + Sbjct: 64 ASPEERPA----LLAGSKELAQKVKDAEAAQHEAQAKLDEAHRAISNIVQDGAP-AGGED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + I + +VG+ P+ ++H E+GE+LGL+D +R K+SG+RF LTG A L+ + Q Sbjct: 119 DFITLETVGEIPTFDFEPKDHLELGESLGLIDMERGAKVSGSRFYFLTGFGAMLQLGMLQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 +G+T + P+LVR E M GTG + + +D+++ D +L+ TSEV L Sbjct: 179 LAAQ-KAMANGFTMMIPPVLVRPEVMQGTGFLGQHSDEVYHLADDDLYLVGTSEVPLAGY 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EI++ P R+ + FR EAGS G+DTRG++R HQF K E+ + + ED+ EH Sbjct: 238 HSGEILDLSKGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAEH 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +R+L+ ++L + L YRV+ + GDLG SA + +D E W+ Q YRE++S S C + Sbjct: 298 QRLLAWERDMLDAMGLPYRVIDVAGGDLGSSAARKFDCEAWVPTQQAYRELTSTSNCTTY 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR++ RYRD N K + TLNG+ +A R L+AILEN+ ADGSV +P L P++ Sbjct: 358 QARRLSVRYRDENGK-PQTAATLNGT-LATTRWLVAILENHQQADGSVRVPAALVPFV-G 414 Query: 420 LAVIK 424 V+ Sbjct: 415 REVLT 419 >gi|295101875|emb|CBK99420.1| seryl-tRNA synthetase [Faecalibacterium prausnitzii L2-6] Length = 442 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 135/442 (30%), Positives = 228/442 (51%), Gaps = 17/442 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R NP+ + +KK+ + P + ++ D K R +K++E ++A RN S Sbjct: 1 MLDIKFVRDNPDAVKENIKKKFQDAKLPLVDEVIEKDAKYRECLKEVETLKAARNKLSKA 60 Query: 58 ----IGQAIAEGNLSLVDALKNE-------TSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 GQ + + L+ + +++ LE EE ++ +++++ IP Sbjct: 61 NGPLFGQLKKCDDEAKKAELQAQIDANNAAVKADADKMAELEAEEAKLAERIQEIMYTIP 120 Query: 107 NVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 + VPIG N+ + G+ H EI E+ +D D A +++G F Sbjct: 121 QMIDPSVPIGPDDTYNVEAQRFGEPVVPDFPIPYHTEIMESFDGIDMDAAGRVAGNGFYY 180 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DG 225 L G++A L A+ + D + G+T V P ++ + G P+ M+ + Sbjct: 181 LLGNIARLHEAVLAYARDFMI-DKGFTYVIPPFMMHGNVVQGVMSFPEMDAMMYKIEGED 239 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LI TSE ++ + + ++ +LPL T+ +P FR E G+ G + RG+ R HQF K E Sbjct: 240 LYLIGTSEHTMIGRFIDQTLDEAALPLTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQE 299 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 ++ + R E+S +E++ + E+ + +++ R ++ C+GDL K+ D+E W Q Sbjct: 300 MIVVCRPEESADWYEKLWKNSVELFRSMEIPVRQLNCCSGDLADLKVKSCDIEAWSPRQQ 359 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 Y E+ SCS G+ Q+RR++ R + + K HTLN + VA R LIA LEN+L ADG Sbjct: 360 KYFEVCSCSNLGDAQARRLHIRVKGKDGK-TYLAHTLNNTCVAPPRMLIAFLENHLQADG 418 Query: 406 SVTIPTVLRPYMNNLAVIKKEH 427 SVTIP VL+PYM L V+ H Sbjct: 419 SVTIPKVLQPYMGGLEVMVPVH 440 >gi|313203755|ref|YP_004042412.1| seryL-tRNA synthetase [Paludibacter propionicigenes WB4] gi|312443071|gb|ADQ79427.1| seryl-tRNA synthetase [Paludibacter propionicigenes WB4] Length = 423 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 147/421 (34%), Positives = 235/421 (55%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML +++I +N E + + L K++ + ++ LD + K++ A N+ S +I Sbjct: 1 MLTLKYITENTEEVIVRLAKKNFDGADIIAQVVELDNVRKTTQVKVDTASAELNNLSKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +G K +T LKE + +L ++ L +L+ IPN+P E VP G Sbjct: 61 GLLFKQGKQDEAAQAKEKTVELKESIKVLGDQQTAAELKLNELLVQIPNLPHESVPAGKH 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N++ R+ G P+ + H+++ + L+DF+ K+SGA F V G A L+RAL Sbjct: 121 AEDNLIERTGGVMPNLHADAVPHWDLAKKYDLIDFELGVKISGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSLT 237 F +D + E GY EV P +V + YGTGQ+P M CT D +LIPT+EV +T Sbjct: 181 INFFLD-NAREAGYLEVQPPYVVNAASGYGTGQLPDKEGQMYHCTVDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y I+ LP+R T + FR EAGS G+D RG+ R HQF K E+V I + S+ Sbjct: 240 NIYRDVILNESELPIRNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVQIQHPDKSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 ++M++ + ++ +L+L +R++ LC GD+ F++ T+D EV+ A Q + E+SS S Sbjct: 300 TLDQMVNYVQTLVDKLELPWRILRLCGGDMSFTSALTFDFEVFSAAQERWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+ R+ R+R + K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 SYQANRLKCRFRTAD-KKTQLCHTLNGSAMALPRIVAALLENNQTPEG-IRIPKALIPYT 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|294790574|ref|ZP_06755732.1| serine--tRNA ligase [Scardovia inopinata F0304] gi|294458471|gb|EFG26824.1| serine--tRNA ligase [Scardovia inopinata F0304] Length = 428 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 142/430 (33%), Positives = 231/430 (53%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR+N + + + +KR + + +L D++ R + + E RA + + Sbjct: 1 MLDIQFIRENSDIVKESQRKRGESVELVDEVLQADKQRRDSLSQYETTRAEQKRIGKTVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A AE + + T L ++ + + + + N+ E P G Sbjct: 61 AASAEERPA----IIARTKELSARVSAFKDAADKATEEYTAAMWKLSNIVEPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + + H E+GE + +D R K+SG+RF L G +A LE A Sbjct: 117 DYVVVKKVGQLRDFAAEGFDPKNHLELGEGVAGIDMKRGVKVSGSRFYFLRGAVARLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D HG+ + P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMGVD-QAEAHGFIMTTTPTLVRPEIMAGTGFLNSHADEIYRLREPDDQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EI++ PLR+ + +R EAGSAG+DT G++R HQF K E+ R+EDS Sbjct: 236 LAGMHEDEILDLSKGPLRYAGWSSCYRREAGSAGKDTMGIIRVHQFNKVEMFVYCRQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + +H+ +L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 YAQHQNLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + S + TLNG+ +A R L+AILEN+ ADGS+ IP LRP Sbjct: 356 CTEYQARRLNIRERTEDG-STRPVSTLNGT-LATTRWLVAILENHQQADGSIEIPAALRP 413 Query: 416 YMNNLAVIKK 425 YM VI Sbjct: 414 YMGGRQVIDP 423 >gi|303235731|ref|ZP_07322338.1| serine--tRNA ligase [Prevotella disiens FB035-09AN] gi|302484178|gb|EFL47166.1| serine--tRNA ligase [Prevotella disiens FB035-09AN] Length = 429 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 142/422 (33%), Positives = 238/422 (56%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+ + + +L D+ R +K++ + ++N S Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFAGAKEAIDKVLEFDKTRRECQQKLDSNKQQQNQLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + +KN+ + LK L++E + + + +++ IPN+ ++VP G Sbjct: 61 IGGLMKEGKKDEANEIKNKVAALKVADKTLQEEMEKAQNDMTEVLLTIPNIANDDVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N++++ G KP+ + H+++ + L+DFD K++GA F + G +A +RA Sbjct: 121 DASQNVIVKEGGTKPTFEGEALCHWDLCKQYNLVDFDLGVKITGAGFPIYIGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F ++ + GY EV PLLV + GTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLEE-ARKSGYLEVQPPLLVNQASGLGTGQLPDKEGQMYHVQADDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I + S+ Sbjct: 240 TNIFRDEILDEKELPIKRCAYSSCFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPQHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ML E +L++L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 ESLNEMLEHVESLLQKLELPYHILRLCGGDMSFTSAICYDFEVWSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R++ RYR K ++ HTLNGS +A+ R + AI+EN +G + +P L PY Sbjct: 360 ESYQANRLHCRYRKAEDKKIELCHTLNGSALALPRIVAAIIENNQTPEG-IRVPKALVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|308802754|ref|XP_003078690.1| seryl-tRNA synthetase, putative / serine--tRNA ligase, putative (ISS) [Ostreococcus tauri] gi|116057143|emb|CAL51570.1| seryl-tRNA synthetase, putative / serine--tRNA ligase, putative (ISS) [Ostreococcus tauri] Length = 506 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 134/431 (31%), Positives = 219/431 (50%), Gaps = 11/431 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +++R N E + R ++ +++ E L K ++IR +RN+N+ + Sbjct: 80 IDFKFVRDNAEAVQKNAGVRRVDVNVAEVVAKYEALNALSFKCDEIREKRNANAKSM--- 136 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + DAL E LK+ L LE E + + L+ + +PN+ +VP+G N Sbjct: 137 KGKMEKETRDALIAEGKALKDSLAELEVELATLENELQTMAQRLPNLTHPDVPVGGEENA 196 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 ++ VG + + + H +IGE LG+ DF+ +K+SG+RF LTG A LE AL + Sbjct: 197 TVVAE-VGSQRAFTFPVQNHVDIGEKLGMFDFETGSKVSGSRFVYLTGVGAMLELALINW 255 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 G+ + P +VR + G P+ + + T+E+ L + Sbjct: 256 AF-AKVLSKGFKPMMVPDMVRSSVVEKCGFQPRAENTQVYSIENSDLCMAGTAELLLGGV 314 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y E++E LP++ + FR+EAG+AG TRGM R HQF K E+ + E S H Sbjct: 315 YMDEVVEESQLPIKMAAFSHCFRTEAGAAGAQTRGMYRLHQFSKVEMFVVATPEQSDAIH 374 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + + E+ + L H++V+ + T DLG A + +D+E W+ Y EISS S C ++ Sbjct: 375 QELKDIEIEMFQELGFHFKVLDMPTEDLGAPAYRKFDVEAWMPALERYGEISSASNCTDY 434 Query: 360 QSRRMNSRYRDP--NSKSLKFT--HTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 Q+RR+N +YR + K HTLN + A+ R ++ ILEN+ DGSV +P LRP Sbjct: 435 QARRLNIKYRPNPVDGKKQPLVHCHTLNATACAIPRMIVTILENFQQEDGSVVVPEPLRP 494 Query: 416 YMNNLAVIKKE 426 Y+ + V++ E Sbjct: 495 YLGGMDVLRPE 505 >gi|289449623|ref|YP_003475535.1| serine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184170|gb|ADC90595.1| serine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 432 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 141/436 (32%), Positives = 229/436 (52%), Gaps = 12/436 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ IR+ + L ++ L+ D+ R LI +E+++ARRN SAQI Q Sbjct: 1 MLDIQMIRKEAPKVQELLARKGCNVDFTEFLNKDKSRRDLIAAVENLKARRNQVSAQIPQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + E + Q+ ++ E + + ++ +PN+P E++ G N Sbjct: 61 LKKA--KADTTEIMAEMKDIAAQIKTMDAELAALEKDQLEFLAGLPNLPAEDLLPGGKEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ G KP ++ H E+ E+L ++D+ R +KLSG F + A LE AL Sbjct: 119 NRVVKV-FGNKPEFNFPAKHHVELAESLDIIDYARGSKLSGNGFWIYKNMGARLEWALLN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--------TTDGRWLIPTS 232 + + H ++ Y + P ++ + GQ PKF +D+F + ++++PT+ Sbjct: 178 YFMQEHLKDN-YEMLLVPHILNYTCGFTAGQFPKFKEDVFWLVSEEGTEEANRQFILPTA 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E +L NLY EI++ LP +F P +R EAGS + RGM+R HQF K E+ T Sbjct: 237 ETALVNLYRDEILDESDLPKKFFAYTPCYRKEAGSYRAEERGMIRGHQFNKIEMFQYTLP 296 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S + ++ A ++ L LH+R+ L GD S +T D+E+W+ N Y+E+SS Sbjct: 297 ENSAQAFDELVDKACRLVAGLGLHFRLSKLAAGDCSASMARTDDIEIWIPSMNDYKEVSS 356 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S ++Q+RR N ++R + ++ HTLN SG+A R L AILE ADGSV +P V Sbjct: 357 ASNACDYQARRGNMKFRRKATGKTEYLHTLNASGLATSRVLPAILEQNQQADGSVVVPEV 416 Query: 413 LRPYMNNLAVIKKEHI 428 LRP++ + VIK + + Sbjct: 417 LRPFLGGIDVIKPQQV 432 >gi|88801805|ref|ZP_01117333.1| seryl-tRNA synthetase [Polaribacter irgensii 23-P] gi|88782463|gb|EAR13640.1| seryl-tRNA synthetase [Polaribacter irgensii 23-P] Length = 424 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 161/428 (37%), Positives = 234/428 (54%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML +Q+IR+N + + L KR+ E + +L+ DE R ++ I A N S + Sbjct: 1 MLQVQFIRENKQIVLNGLAKRNFVNAETLIDNVLNTDENRRATQTSLDAILAESNKLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG G LK +T LKEQ L + + + SL+ L+ IPNVP E V G Sbjct: 61 IGAFFQSGERQKATILKEKTVQLKEQSKQLSENLNALSESLQTLLYLIPNVPHESVKPGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S ++N I S G P+ + H+E+ + ++DF+ TK++GA F V G A L+RA Sbjct: 121 SEDDNENIFSEGSIPNLGENALPHWELAKKYDIIDFELGTKITGAGFPVYKGKGAKLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + +D + E GY E P LV E+ TGQ+P M+ D +LIPT EV + Sbjct: 181 LINYFLDKNI-EAGYKEFQVPHLVNVESATATGQLPDKEGQMYHSNEDDLYLIPTGEVPI 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ + I++ P+ T P FR EAGS G RG+ R HQF K E+V I ++S+ Sbjct: 240 TNMFRNNIVQESDFPICCTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPKNSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + M+ + IL+ L+L YR++ LC GD GF+A T+D E++ QN + EISS S Sbjct: 300 AALDGMVEHIKGILRELELPYRILRLCGGDTGFTAALTFDFELFSTAQNRWLEISSASNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+ R+ R+++ KS ++ HTLNGS +A+ R L ILENY A+G + IP VL PY Sbjct: 360 ETFQANRLKLRFKNKEGKS-EYAHTLNGSSLALPRVLAGILENYQTAEG-IKIPEVLVPY 417 Query: 417 MNNLAVIK 424 IK Sbjct: 418 C-GFDYIK 424 >gi|171920478|ref|ZP_02931777.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902936|gb|EDT49225.1| seryl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 418 Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats. Identities = 176/418 (42%), Positives = 257/418 (61%), Gaps = 4/418 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI IR++ + + + + I LD R L+++ +++ A++N S +I Sbjct: 1 MFDINLIRKDITVTKEKMLNKKVPSNLFDQIFDLDVLVRNLMQQEQNLNAKKNQLSKEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + + +++K +L + L KL+ IPN+P + VPIG Sbjct: 61 IL-AKNKDPKLQQTLDLVNSIKNELQNISLTLSNKQDELNKLLLVIPNMPDDSVPIGNDE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+ V + L H+++ L+DFD++TK++G+RF + T A L RAL Sbjct: 120 NDNVEIKKVFEPKKFNFLPLAHWDLAVKNKLIDFDKSTKITGSRFIIYTNFGARLYRALQ 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 QF +D++ + G++E+ AP++V E++ G+G +PKFADD+F +L PT+EV LTN Sbjct: 180 QFCLDMNV-KAGFSEIWAPVIVNQESLIGSGNLPKFADDLFKLENSNYYLSPTAEVQLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ +EI+++ LPL +T L P FRSEAGSAGRD RG++RQHQF K ELV + + EDSF E Sbjct: 239 LHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L+L YR + LCTGDLGFS+ KTYDLEVWL N Y+EISSCS C N Sbjct: 299 LESMTRQAESILEALELPYRRIVLCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTN 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR RY++ + + HTLNGS +A+ R AI+ENY DGS+ IP VL+ Y Sbjct: 359 FQARRAKIRYKETIDATTELVHTLNGSSLAIDRLWAAIVENYQQEDGSINIPKVLKKY 416 >gi|227876462|ref|ZP_03994574.1| serine--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|227843003|gb|EEJ53200.1| serine--tRNA ligase [Mobiluncus mulieris ATCC 35243] Length = 425 Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats. Identities = 151/430 (35%), Positives = 244/430 (56%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +++NPE + + + R +P + ++ D+K ++ E+ RA + + S QIG Sbjct: 1 MIDMRLMKENPEPMRASQRARGNDPATVDAAIAADDKRLEALQAFENARAEQKAFSKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + L E + E++ LE+ +E ++ K+ + N L+ VP G Sbjct: 61 KASKEERPA----LLEEAKRMSEKVKTLEEAANEAATAAKQAAMVLENQILDGVPSGGED 116 Query: 120 NENILIR---SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +L + + + ++H ++G L +D DR K+SG+RF L G A LE Sbjct: 117 DYEVLSQEGTPIRDFAAEGFKPKDHLDLGLGLDAIDTDRGVKVSGSRFYYLKGVGARLEL 176 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 A+ ID HG+T + P +V M GTG + + +D+++ D +L TSEV+ Sbjct: 177 AILNAAIDTAI-AHGFTPMITPCMVSPATMSGTGFLGEHSDEIYYLPADDLYLTGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EII+ + P R++ + FR EAGS G+DTRG++R HQF K E+ S R E+S Sbjct: 236 LAGYHTDEIIDLSAGPKRYSGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCRPEES 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++L+ E+L +++L YRV++ GDLG SA + +D E WL Q + E++S S Sbjct: 296 VEEHQKLLNMEREMLAKVELPYRVINTAAGDLGSSAAQKFDCEAWLPTQQRFMEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+N RYRD N K + TLNG+ + R ++AILEN+ ADGSV +P LRP Sbjct: 356 CTTFQARRLNIRYRDENGK-TQTCATLNGT-LGTTRWIVAILENHQQADGSVRVPAGLRP 413 Query: 416 YMNNLAVIKK 425 YM L V++ Sbjct: 414 YMGGLEVLEP 423 >gi|220911065|ref|YP_002486374.1| seryl-tRNA synthetase [Arthrobacter chlorophenolicus A6] gi|254783002|sp|B8H9Q1|SYS_ARTCA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|219857943|gb|ACL38285.1| seryl-tRNA synthetase [Arthrobacter chlorophenolicus A6] Length = 426 Score = 359 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 146/430 (33%), Positives = 234/430 (54%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + +NP+ + + R + + I+S D R + + E++RA +N ++ Sbjct: 1 MIDVKDLSENPDKFRASQRARGADESVVDAIISADSARRAALIRYENLRAEQNVFGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E AL E L + E + ++L+ +PN+ + VP G Sbjct: 61 QAKGEEK----QALLAEVKELANSVKAASAEADAAQTKQEELLRTVPNLVEDGVPEGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + ++ + ++H EIGE +G +D +R K+SG+RF L G A LE AL Sbjct: 117 DYVVVKTVGTPREFPDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALL 176 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q ++ E G+ + P LVR E M GTG K +++ D +L+ TSEV+L Sbjct: 177 QMAME-QAIEAGFIPMITPTLVRPETMQGTGFDVKHDAEIYRLAEDDLYLVGTSEVALAG 235 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + P+R+ + +R EAGS G+DTRG++R HQF K E+ T E++ E Sbjct: 236 YHADEILDFSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAE 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L+ EE+L + +L YRV+ GDLG SA + YD E W+ Q YRE++S S C Sbjct: 296 HQRLLAWEEEMLAKCELPYRVIDTAAGDLGNSAARKYDCEAWVPTQGAYRELTSTSNCTT 355 Query: 359 FQSRRMNSRYRDPN----SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 FQ+RR+N R R N +K + TLNG+ +A R ++A+LE++ NADGSV +P L+ Sbjct: 356 FQARRLNIRERAVNAEGVAKGTRAVATLNGT-LATTRWIVALLEHHQNADGSVNVPKALQ 414 Query: 415 PYMNNLAVIK 424 Y+ L V+ Sbjct: 415 KYLGGLEVLP 424 >gi|307566104|ref|ZP_07628562.1| serine--tRNA ligase [Prevotella amnii CRIS 21A-A] gi|307345292|gb|EFN90671.1| serine--tRNA ligase [Prevotella amnii CRIS 21A-A] Length = 429 Score = 359 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 152/422 (36%), Positives = 245/422 (58%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H + E +LSLD R +K+++ + ++N S Q Sbjct: 1 MLTLKLISEETERVVRGLEKKHFQGARDAVEKVLSLDRMRREAQQKLDNNKQQQNLLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + +A+K + LK L++E + + + +L+ IPN+ ++VP G Sbjct: 61 IGGLMKEGKKADAEAIKQKVGELKSLDKSLQEEMEKAQNDMNELLLSIPNIANDDVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N++++ GKKP + H++I + L+DF+ K++GA F + G +A +RA Sbjct: 121 DASDNVVVKEGGKKPDLPKDALCHWDICKKYNLIDFELGVKITGAGFPIYIGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L F +D + GY EV PL+V + GTGQ+P M+ T D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPLVVNQASGLGTGQLPDKEGQMYHATLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I + S+ Sbjct: 240 TNIFRDEILDEKDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPKHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ML E +LK+L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 DSLKEMLDHVEGLLKKLELPYHILRLCGGDMSFTSAICYDFEVWSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R++ RYR K ++ HTLNGS +A+ R + AI+EN ++G V +P VL PY Sbjct: 360 ESYQANRLHCRYRHLEDKKIELCHTLNGSALALPRIVAAIIENNQTSEG-VRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|269976029|ref|ZP_06183033.1| seryl-tRNA synthetase [Mobiluncus mulieris 28-1] gi|307700484|ref|ZP_07637520.1| serine--tRNA ligase [Mobiluncus mulieris FB024-16] gi|269935857|gb|EEZ92387.1| seryl-tRNA synthetase [Mobiluncus mulieris 28-1] gi|307614291|gb|EFN93524.1| serine--tRNA ligase [Mobiluncus mulieris FB024-16] Length = 435 Score = 359 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 151/430 (35%), Positives = 244/430 (56%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +++NPE + + + R +P + ++ D+K ++ E+ RA + + S QIG Sbjct: 11 MIDMRLMKENPEPMRASQRARGNDPATVDAAIAADDKRLEALQAFENARAEQKAFSKQIG 70 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + L E + E++ LE+ +E ++ K+ + N L+ VP G Sbjct: 71 KASKEERPA----LLEEAKRMSEKVKTLEEAANEAATAAKQAAMVLENQILDGVPSGGED 126 Query: 120 NENILIR---SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +L + + + ++H ++G L +D DR K+SG+RF L G A LE Sbjct: 127 DYEVLSQEGTPIRDFAAEGFKPKDHLDLGLGLDAIDTDRGVKVSGSRFYYLKGVGARLEL 186 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 A+ ID HG+T + P +V M GTG + + +D+++ D +L TSEV+ Sbjct: 187 AILNAAIDTAI-AHGFTPMITPCMVSPATMSGTGFLGEHSDEIYYLPADDLYLTGTSEVA 245 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EII+ + P R++ + FR EAGS G+DTRG++R HQF K E+ S R E+S Sbjct: 246 LAGYHTDEIIDLSAGPKRYSGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCRPEES 305 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++L+ E+L +++L YRV++ GDLG SA + +D E WL Q + E++S S Sbjct: 306 VEEHQKLLNMEREMLAKVELPYRVINTAAGDLGSSAAQKFDCEAWLPTQQRFMEVTSTSN 365 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+N RYRD N K + TLNG+ + R ++AILEN+ ADGSV +P LRP Sbjct: 366 CTTFQARRLNIRYRDENGK-TQTCATLNGT-LGTTRWIVAILENHQQADGSVRVPAGLRP 423 Query: 416 YMNNLAVIKK 425 YM L V++ Sbjct: 424 YMGGLEVLEP 433 >gi|304439524|ref|ZP_07399431.1| serine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372004|gb|EFM25603.1| serine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 429 Score = 359 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 138/431 (32%), Positives = 230/431 (53%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + +KK+ + + +L +D + R + +++R +RN+ S Sbjct: 1 MLDIKFVRENPEIVKENIKKKFQDEKLALVDEVLEMDVEFRAKKTRGDELRGKRNALSKT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+ + +K E + + ++L LE++E E+ +++++ IP + ++VPIG Sbjct: 61 IGGHMAKKEFEEAEKVKGEVAHINDELEHLEEDEKELEKKIREIMLVIPQIMADDVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H +I E+ +D D A K SGA F L G +A L A Sbjct: 121 DDSENVELERFGEPVVPDFEIPYHVDIMESFDGIDLDSARKTSGAGFYYLKGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R E + G + + M+ + +LI TSE S+ Sbjct: 181 ILAYARDFMI-DRGFTYFIPPFMIRSEVVTGVMSFAEMENMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I + +PL T+ +P FR E G+ G + RG+ R HQF K E+V I + EDS Sbjct: 240 IGRFIDTITPEEDMPLTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVVICKPEDSM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +ER+ + + ++ + L++ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 MWYERLWNNSVDLFRSLEIPVRTLECCSGDLADLKVKSLDVEAWSPRQQKYFEVCSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R R + HTLN + VA R LIA LEN L DGSV IP L+PY Sbjct: 360 GDAQARRLGIRLRGEDGN--YLAHTLNNTVVAPPRMLIAFLENLLQEDGSVRIPEPLQPY 417 Query: 417 MNNLAVIKKEH 427 M + I+++ Sbjct: 418 MGGMKEIRRKD 428 >gi|116668708|ref|YP_829641.1| seryl-tRNA synthetase [Arthrobacter sp. FB24] gi|166200597|sp|A0JR71|SYS_ARTS2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116608817|gb|ABK01541.1| seryl-tRNA synthetase [Arthrobacter sp. FB24] Length = 426 Score = 359 bits (920), Expect = 7e-97, Method: Composition-based stats. Identities = 145/430 (33%), Positives = 235/430 (54%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + +NP+ + + R + + I+S D R + + E++RA +N+ ++ Sbjct: 1 MIDVKDLSENPDKFRASQRARGADESVVDAIISADAARRAALIRFENLRAEQNAFGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E AL E L + E + ++L+ IPN+ ++ VP G Sbjct: 61 QAKGEEK----QALLAEVKVLAASVKAASAEADVAQAQQEELLRAIPNLIVDGVPEGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + ++ + ++H EIGE +G +D +R K+SG+RF L G A LE AL Sbjct: 117 DYIVVKTVGEPREFPDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALL 176 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q ++ + G+ + P LVR E M GTG K +++ D +L+ TSEV+L Sbjct: 177 QMAME-QAIDAGFIPMITPTLVRPETMQGTGFDVKHDAEIYRLAEDDLYLVGTSEVALAG 235 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + P+R+ + +R EAGS G+DTRG++R HQF K E+ T E++ E Sbjct: 236 YHADEILDLSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAE 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HER+L+ EE+L + +L YRV+ GDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 HERLLAWEEEMLAKCELPYRVIDTAAGDLGNSAARKFDCEAWVPTQGAYRELTSTSNCTT 355 Query: 359 FQSRRMNSRYR--DPNS--KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 FQ+RR+N R R + + K + TLNG+ +A R ++AILE++ N DGSV +P L+ Sbjct: 356 FQARRLNIRERVLNEDGAPKGTRAVATLNGT-LATTRWIVAILEHHQNEDGSVNVPRALQ 414 Query: 415 PYMNNLAVIK 424 Y+ L V+ Sbjct: 415 KYLGGLEVLP 424 >gi|297564185|ref|YP_003683158.1| seryl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848634|gb|ADH70652.1| seryl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 436 Score = 359 bits (920), Expect = 7e-97, Method: Composition-based stats. Identities = 160/426 (37%), Positives = 244/426 (57%), Gaps = 11/426 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++ +R++PE L + + R +P + +L LD R + + E +RA + +G+ Sbjct: 15 IDLRALREDPERLRASQRARGEDPSVADRLLGLDADRRSALSRFETLRAEQ----KSVGR 70 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++++ + + L L ++ E E + L L+S +PN+ E P G + Sbjct: 71 SVSKASPEEREELLTRAKALAAEVKEAEAEAGRLADELDALLSGVPNLVEEGAPEGGVDD 130 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 IL VG S R+H E+GE LG +D +R K+SGARF LTG A LE AL Sbjct: 131 FRILET-VGTPRSFDFTPRDHLELGEMLGAIDMERGAKVSGARFYFLTGVGAQLELALLN 189 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 ++ + G+T + P+LVR E M GTG + AD+++ D +L+ TSEV L Sbjct: 190 MAMN-QAVQAGFTPMIPPVLVRPETMEGTGFLGAHADEVYHLPADDLYLVGTSEVPLAGY 248 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EI+ + +LP R+ +P FR EAGS G+DTRG++R HQF K E+ T + + EH Sbjct: 249 HSGEILPADALPNRYIGWSPCFRREAGSYGKDTRGIIRVHQFNKVEMFVYTHPDQAHEEH 308 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +R+L+ E+L +L+L YRVV + GDLG SA + YD E W+ Q YRE++S S C F Sbjct: 309 KRLLAWEREMLDKLELPYRVVDIAGGDLGTSAARKYDCEAWVPTQETYRELTSTSNCTEF 368 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+N R+RD + K +F TLNG+ +A R ++AILEN+ DGSV +P LRPY+ Sbjct: 369 QARRLNVRFRDEDGK-PRFAATLNGT-LATTRWIVAILENHQREDGSVVVPEALRPYL-G 425 Query: 420 LAVIKK 425 V++ Sbjct: 426 RDVLEP 431 >gi|157804152|ref|YP_001492701.1| seryl-tRNA synthetase [Rickettsia canadensis str. McKiel] gi|166223281|sp|A8EZY3|SYS_RICCK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157785415|gb|ABV73916.1| seryl-tRNA synthetase [Rickettsia canadensis str. McKiel] Length = 425 Score = 359 bits (920), Expect = 7e-97, Method: Composition-based stats. Identities = 205/424 (48%), Positives = 280/424 (66%), Gaps = 3/424 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+I+WIR+N E D L +R +EP S I LDE+ R + I++ + R S +G Sbjct: 1 MLNIKWIRENQELFDEKLSQRFIEPMSSKIAMLDEEKRKITSLIQEFQHARRVKSKILGN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + + L+ + + E+L LEK+ + + L +PN+P +EVP G + Sbjct: 61 -MTSKSSEEFEGLQRDVKHINEKLEELEKDLNNNNELNELLNM-LPNIPDDEVPYGIDES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N L+R+ G+ + L+++HFE+G L LMDF++ TK+SGARF L G LA LERAL Sbjct: 119 MNKLVRTYGEI-NPNALNKQHFELGTKLNLMDFEQTTKISGARFVTLKGDLAKLERALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FMID+HT E + E+S P+LVRD AMY GQ+PKF ++ F TT G LIPT+EVSL N+ Sbjct: 178 FMIDVHTKEFDFFEISPPVLVRDNAMYNAGQLPKFTEESFATTKGYRLIPTAEVSLVNIV 237 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + II + LP+R+ FRSEAGS+GRDTRGM+R HQF K ELVSIT E+S EHE Sbjct: 238 ADTIISREKLPMRYVAYTQCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESQNEHE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + +E IL++L+L YR++ LCTGD+GF+A KTYD+EVWL GQ YREI+SCS CG+FQ Sbjct: 298 YITNASETILQKLNLPYRIMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 +RRM +RY++ S HTLN SG+ +GR ++AILE+Y N DGS+TIP VL YM L Sbjct: 358 ARRMKARYKEFGSNDTTLVHTLNASGLPIGRTMVAILESYQNEDGSITIPDVLINYMGGL 417 Query: 421 AVIK 424 I Sbjct: 418 QKIT 421 >gi|291515571|emb|CBK64781.1| seryl-tRNA synthetase [Alistipes shahii WAL 8301] Length = 423 Score = 359 bits (920), Expect = 7e-97, Method: Composition-based stats. Identities = 155/427 (36%), Positives = 241/427 (56%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I+ IR + E L K+ ++ P E I+S D++ + L ++++ A +N + +I Sbjct: 1 MLTIKQIRDDKEAAARKLAKKGVDAAPVIEKIISFDDRRKALQLELDNTLAAQNKAAKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + +G + K + LKE+ LE E + L+ I +PN P E VP G + Sbjct: 61 GALMGQGRREEAEERKRFVADLKEKSSRLEAELTDARQELQSAIVSLPNFPAEIVPEGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N++++ V + H+E+ ++DFD KL+GA F V G A L+RAL Sbjct: 121 AEDNLVVKLVESYTALPENPLPHWELARKYDIIDFDLGVKLTGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 + +D +T GY EV P++V + + +GTGQ+P M+ T D +L+PT+EV +T Sbjct: 181 INYFLDCNT-AAGYLEVEPPVMVNEASGFGTGQLPDKEGQMYHATVDNFYLVPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y I+E + P++ T P FR EAGS G+D RG+ R HQF K E+V ++ E S+ Sbjct: 240 NIYRDVILEKEDFPVKMTAYTPCFRREAGSYGKDVRGLNRLHQFDKVEIVQLSLPEKSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M++ E I+K L L YR++ LC GD+ F++ TYD EV+ Q + E+SS S Sbjct: 300 ALDGMVAHVESIVKALGLPYRILRLCGGDMSFTSALTYDFEVYSEAQKRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+ R+ RYRD K ++ HTLNGS +A+ R + A+LENY +G + IP L PY Sbjct: 360 SFQANRLKLRYRDEE-KKIQLAHTLNGSSLALPRIVAALLENYQTPEG-IRIPEALIPYT 417 Query: 418 NNLAVIK 424 +IK Sbjct: 418 -GFDIIK 423 >gi|306817420|ref|ZP_07451165.1| serine--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|304649861|gb|EFM47141.1| serine--tRNA ligase [Mobiluncus mulieris ATCC 35239] Length = 425 Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats. Identities = 151/430 (35%), Positives = 244/430 (56%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +++NPE + + + R +P + ++ D+K ++ E+ RA + + S QIG Sbjct: 1 MIDMRLMKENPEPMRASQRARGNDPATVDAAIAADDKRLETLQAFENARAEQKAFSKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + L E + E++ LE+ +E ++ K+ + N L+ VP G Sbjct: 61 KASKEERPA----LLEEAKRMSEKVKTLEEAANEAATAAKQAAMVLENQILDGVPSGGED 116 Query: 120 NENILIR---SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +L + + + ++H ++G L +D DR K+SG+RF L G A LE Sbjct: 117 DYEVLSQEGTPIRDFAAEGFKPKDHLDLGLGLDAIDTDRGVKVSGSRFYYLKGVGARLEL 176 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 A+ ID HG+T + P +V M GTG + + +D+++ D +L TSEV+ Sbjct: 177 AILNAAIDTAI-AHGFTPMITPCMVSPATMSGTGFLGEHSDEIYYLPADDLYLTGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EII+ + P R++ + FR EAGS G+DTRG++R HQF K E+ S R E+S Sbjct: 236 LAGYHTDEIIDLSAGPKRYSGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCRPEES 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++L+ E+L +++L YRV++ GDLG SA + +D E WL Q + E++S S Sbjct: 296 VEEHQKLLNMEREMLAKVELPYRVINTAAGDLGSSAAQKFDCEAWLPTQQRFMEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+N RYRD N K + TLNG+ + R ++AILEN+ ADGSV +P LRP Sbjct: 356 CTTFQARRLNIRYRDENGK-TQTCATLNGT-LGTTRWIVAILENHQQADGSVRVPAGLRP 413 Query: 416 YMNNLAVIKK 425 YM L V++ Sbjct: 414 YMGGLEVLEP 423 >gi|120437825|ref|YP_863511.1| seryl-tRNA synthetase [Gramella forsetii KT0803] gi|117579975|emb|CAL68444.1| seryl-tRNA synthetase [Gramella forsetii KT0803] Length = 423 Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats. Identities = 160/421 (38%), Positives = 233/421 (55%), Gaps = 6/421 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + I ++ E ALKKR+ + + E +L+LDE R K++D A N S +I Sbjct: 1 MLQVSNIAEHKEEYIKALKKRNFDAEDIFEQVLTLDETRRTTQAKLDDTLATSNKISKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + LK +T LKE+ L ++ L+ L+ IPN+P + VP G + Sbjct: 61 GLMFKNGEHQKANVLKEKTGKLKEESKELSEKLTSTVDDLQNLLYTIPNIPHDSVPAGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N I G P + S H+E+ + ++DF+ K++GA F V G A L+RAL Sbjct: 121 EDDNEEIYKEGDIPVLVEGSLPHWELAKKYDIIDFELGNKVTGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 + +D T E GYTE PL+V + + GTGQ+P M+ T D +LIPTSEV +T Sbjct: 181 ITWFLDKAT-EAGYTEFQLPLMVNEASGLGTGQLPDKEGQMYHVTEDDLYLIPTSEVPMT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++ K P+ T P FR EAGS G RG+ R HQF K E+V + E+S+ Sbjct: 240 NMFRDRLMNEKDFPILCTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRLETPENSYA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + +LK L L YR++ LC GDLGF+A T D EV+ Q+ + EISS S Sbjct: 300 ALDSMVDHIKGLLKELKLPYRILRLCGGDLGFTAALTMDFEVFSTAQDRWLEISSVSNVE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 NFQ+ R+ RY++ ++ + HTLNGS +A+ R L ILENY DG + +P VL PY Sbjct: 360 NFQANRLKLRYKNKENQK-ELVHTLNGSALALPRVLAGILENYQTQDG-IKVPEVLVPYC 417 Query: 418 N 418 Sbjct: 418 G 418 >gi|171920715|ref|ZP_02931931.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|171903457|gb|EDT49746.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] Length = 418 Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats. Identities = 175/418 (41%), Positives = 255/418 (61%), Gaps = 4/418 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI IR++ + + + + I LD R L+++ +++ A++N S +IG Sbjct: 1 MFDINLIRKDIVVTKEKMLNKKVSSDLFDQIFGLDVLVRNLMQQEQNLNAKKNQLSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + + +++K +L + L KL+ IPN+P + VPIG Sbjct: 61 IL-AKNKDPKLQQTLDLVNSIKSELQDISLTLSNKQDELNKLLLVIPNMPDDSVPIGNDE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+ V + H+++ L+DFD++TK++G+RF + T A L RAL Sbjct: 120 NDNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLYRALQ 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 QF +D++ + G+ E+ AP++V E++ G+G +PKFADD+F +L PT+EV LTN Sbjct: 180 QFCLDMNV-KAGFNEIWAPVIVNQESLIGSGNLPKFADDLFKLENSNYYLSPTAEVQLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ +EI+++ LPL +T L P FRSEAGSAGRD RG++RQHQF K ELV + + EDSF E Sbjct: 239 LHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L+L YR ++LCTGDLGFS+ KTYDLEVWL N Y+EISSCS C N Sbjct: 299 LESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTN 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR RY++ + HTLNGS +A+ R A++ENY DGS+TIP L Y Sbjct: 359 FQARRAKIRYKETVDAPTELVHTLNGSSLAIDRLWAAVVENYQQEDGSITIPKALEKY 416 >gi|153951229|ref|YP_001398568.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] gi|166228635|sp|A7H4Y8|SYS_CAMJD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|152938675|gb|ABS43416.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] Length = 411 Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats. Identities = 179/419 (42%), Positives = 258/419 (61%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVTKKLKSKKVDENILKKLAELFASLKKEKTALEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A ++LK + S K ++ + + + + L+++ IPN+P E VP+G Sbjct: 61 TA------EDKESLKAKLSENKSKINEQSTKVNVLENELEEIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+ ++ V PS +EHFE+GE+L +DF R K+S +RF VL A L RAL Sbjct: 115 NENVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + G+ V+ P LV M+GTGQ+PKF +DM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPITN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S++LP++ T + FR EAGSAGRDTRG++RQHQF K ELVSIT+ E S + Sbjct: 234 LYSGEILTSETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN YREISS S C + Sbjct: 294 FNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP L+ Y Sbjct: 354 FQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDALKKYF 411 >gi|152991122|ref|YP_001356844.1| seryl-tRNA synthetase [Nitratiruptor sp. SB155-2] gi|166222754|sp|A6Q4S8|SYS_NITSB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|151422983|dbj|BAF70487.1| seryl-tRNA synthetase [Nitratiruptor sp. SB155-2] Length = 414 Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 259/419 (61%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + ++ + + L+ + +E + + L E+ + +++++ ++NS S G Sbjct: 1 MIDLRALEKDFDTIATRLQTKGVEEKVLAELKELFEEYKKEKTILQELQTKQNSLSKMFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q EG ++ LKNE K ++ ++ ++ LK + IPN P +VP+G + Sbjct: 61 QYKREGK--DINELKNELEINKGKIAAHQEVVRDLEEKLKNIALTIPNPPDPDVPVGENE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+++++V + +EH+E+GE LG +DF+R KL+ +RFSVL A LERAL Sbjct: 119 EDNVVLKTVLEPKGFDFEPKEHWELGEKLGWIDFERGVKLAKSRFSVLKKEAARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FM+D H E+G+ EV P + + GTGQ+PKF +D+F D ++IPT+EV LTN Sbjct: 179 NFMLD-HNKEYGFEEVCVPFMANSATLLGTGQLPKFEEDLFKICDEDLYMIPTAEVPLTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY EII+ P++ T P FR EAGS GRD RGM+RQHQF K ELV+ITR E+S Sbjct: 238 LYRDEIIKDLEDPIKLTAYTPCFRKEAGSGGRDVRGMIRQHQFDKVELVAITRPEESDKV 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M+ CA +L +L L +R V LCTGDLGFSA KT DLEVWL GQ YREISS S + Sbjct: 298 FDEMVKCASSLLAKLGLPHRHVMLCTGDLGFSAAKTIDLEVWLPGQGKYREISSISNTRD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR R++D K + HTLNGS +AVGR LIAI+ENY DGS+ IP VL Y+ Sbjct: 358 FQARRAQIRFKD--GKKNRLVHTLNGSSLAVGRTLIAIMENYQQKDGSIAIPKVLESYL 414 >gi|88856638|ref|ZP_01131294.1| seryl-tRNA synthetase [marine actinobacterium PHSC20C1] gi|88814099|gb|EAR23965.1| seryl-tRNA synthetase [marine actinobacterium PHSC20C1] Length = 421 Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 234/427 (54%), Gaps = 10/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D Q +R+NPE + + R Q + ++ D+K R I + E +RA +NS Q+ Sbjct: 1 MIDPQILRENPEAVRQSQIARGASVQLVDDAIAADQKRRASIGEFEALRAEQNSFGKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L E L ++ + E + +++ I N+ ++ VP+G Sbjct: 61 QAPPEEKKA----LVAEAQKLAARVKAAQSVSAEAEADFTRIVGAIGNIAVDGVPVGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + L+R VG S R+H ++GE LG +D R K+SG+RF L G A LE L Sbjct: 117 D-WELVREVGTPASFDFEPRDHADLGEILGAIDIPRGVKVSGSRFYFLKGVGARLELGLM 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +D + + + P LVR E M GTG + + +D+++ D +L TSEV+L Sbjct: 176 NMALDRAIAG-DFIPLITPTLVRPEIMAGTGFLGEHSDEVYYLPADELYLTGTSEVALAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ LR+ + +R EAGSAG+D RG+LR HQF K E+ S E++ E Sbjct: 235 YHSDEILDLSKGALRYAGWSTCYRREAGSAGKDNRGILRVHQFNKLEMFSYVLPENALEE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HER+L+ E +L+ +L YRV+ + GDLG SA + +D+E W+ Q YRE++S S C Sbjct: 295 HERLLAFQESMLQACELSYRVIDVAGGDLGSSAARKFDIEAWVPTQGAYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR++ RYR K TLNG+ +A R L+AILE + DGSV +P LRPY+ Sbjct: 355 YQARRLDIRYRTETGK-TAPVATLNGT-LATTRWLVAILETHQQPDGSVVVPQALRPYLG 412 Query: 419 NLAVIKK 425 L V++ Sbjct: 413 GLEVLEP 419 >gi|313889121|ref|ZP_07822777.1| serine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312844861|gb|EFR32266.1| serine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 428 Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats. Identities = 138/430 (32%), Positives = 220/430 (51%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + +KK+ + P + ++ +DE R K +++RA +N S Sbjct: 1 MLDIKFVRENPEAVKENIKKKFQDDKLPLVDEVIKIDEDLRAAKTKGDNLRAEKNQTSKA 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + K + + + E++ LE E E+ LKK + IP + E VPIG Sbjct: 61 IGGFMQKGEKDKAEEAKKKVAEINEEITNLEAAERELAEELKKRMQVIPQMMDETVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H +I E+ +D D A SGA F L G +A L A Sbjct: 121 DDSENVELERFGEPVIPDFEIPYHIDIMESFNGIDLDSARNTSGAGFYYLKGDIARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+ P ++R + + G + + M+ + +LI TSE S+ Sbjct: 181 ILAYARDFMI-DRGFEYHIPPFMIRSDVVTGVMSFAEMENMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 Y + I + +PL T+ +P FR E G+ G + RG+ R HQF K E+V I + E+S Sbjct: 240 IGKYINTITPEEDMPLALTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVVICKPEESK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ++ + + LD+ R + C+GDL K+ D+E + QN Y E+ SCS Sbjct: 300 DWYVKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSLDVEAFSPRQNKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+N + R + F HTLN + VA R LIA LEN L DGSV IP L+ Y Sbjct: 360 GDAQARRLNIKLRGKDG--TYFAHTLNNTVVAPPRMLIAFLENLLQEDGSVRIPEPLQMY 417 Query: 417 MNNLAVIKKE 426 M + + + Sbjct: 418 MGGMTKLTPK 427 >gi|284028198|ref|YP_003378129.1| seryl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283807491|gb|ADB29330.1| seryl-tRNA synthetase [Kribbella flavida DSM 17836] Length = 424 Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats. Identities = 149/428 (34%), Positives = 228/428 (53%), Gaps = 10/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R NP+ + AL KR P + IL D + R I E +RA + Q+ Sbjct: 1 MIDAKLLRDNPDVVRAALTKRGESPARVDEILVADGERRSSIAAFEALRAEQKGLGKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA AL T L ++ E +E +L +PN+ +E P+G + Sbjct: 61 QAKG----DERAALLERTKALAAEVKAHEATANEAERRFDQLSRALPNLVSDEAPVGGES 116 Query: 120 NENILIRS--VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + R+H E+GE LG +D +R K+SGARF L G A L+ Sbjct: 117 DYVVVEEIGKPRDFAAEGFEPRDHLELGELLGAIDMERGAKVSGARFYFLKGVGAQLQLG 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 + Q I+ E+G+T + P LV+ E M GTG + D +L+ TSEVSL Sbjct: 177 MLQLAIN-QAVEYGFTPMITPTLVKPEVMDGTGYLNAHDDVYRLQEPELYLVGTSEVSLA 235 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 + EI++ P+R+ + +R EAGS G+DTRG++R HQF K E+ S ED+ Sbjct: 236 GYHMDEILDLSGGPVRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEMFSYCSLEDAEA 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EH+R+L +E+L +++L YRV+ TGDLG SA + +D E W+ Q YRE++S S Sbjct: 296 EHQRLLGWEKEMLDKMELAYRVIDTATGDLGASAYRKFDCEAWVPTQGAYRELTSTSNTT 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR+N R+RD + + TLNG+ +A R ++AILE + DGSV +P LRPY+ Sbjct: 356 DYQARRLNIRHRDAEGR-TRHVATLNGT-LATTRWIVAILETHQLPDGSVRVPAALRPYV 413 Query: 418 NNLAVIKK 425 V++ Sbjct: 414 GGREVLEP 421 >gi|311742239|ref|ZP_07716049.1| serine--tRNA ligase [Aeromicrobium marinum DSM 15272] gi|311314732|gb|EFQ84639.1| serine--tRNA ligase [Aeromicrobium marinum DSM 15272] Length = 426 Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats. Identities = 149/429 (34%), Positives = 229/429 (53%), Gaps = 13/429 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R +P+ + AL++R + +++ D R I E +R+ + Q+ Sbjct: 1 MIDPRLVRDDPDAVREALRRRGESSDVVDALIAADADRRGSIAAFEAVRSEQKQIGKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + + L T L ++ + E+ + L+ +PN+ E P G Sbjct: 61 RATGDEKTA----LLARTKELSARVKEADAEQGAAVTRFDDLLRSLPNLVAPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L + + R+H E+GE LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFVVLDVVGTPRDFEAEGFTPRDHLELGELLGAIDVERGAKVSGSRFYYLTGVGARLEIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L Q +D G+ + P LV+ AM GTG + + ADD++ D +L+ TSEV L Sbjct: 177 LVQLAMD-AAMRWGFIPMIPPALVKPRAMEGTGFLGQAADDVYHLEKDDLYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ LP R+ +P FR EAGS GRDTRG+ R H F K E+ + T EDS+ Sbjct: 236 AAYHSDEILDPTILPRRYAAFSPCFRREAGSHGRDTRGIFRVHWFDKVEMFTYTTLEDSW 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L E L L+L YRV+ + TGDLG SA + +D E W+ Q YRE+SS S C Sbjct: 296 DEHQRLLGWEREWLDLLELPYRVIDVATGDLGASAVRKFDCEAWVPTQGKYREVSSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR+++R R + TLNG+ A+ R ++A+LEN ADG+V +P L P+ Sbjct: 356 TEFQARRLDTRIRTESGTVP--AATLNGTLCAMTRTIVALLENGQQADGTVRLPAALHPW 413 Query: 417 MNNLAVIKK 425 + V+ Sbjct: 414 LG--EVLVP 420 >gi|126178761|ref|YP_001046726.1| seryl-tRNA synthetase [Methanoculleus marisnigri JR1] gi|166222743|sp|A3CTP4|SYS_METMJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|125861555|gb|ABN56744.1| seryl-tRNA synthetase [Methanoculleus marisnigri JR1] Length = 425 Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats. Identities = 161/428 (37%), Positives = 237/428 (55%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML+++++R +PE + L KR + + +L +D + R L I D+R RRN S + Sbjct: 1 MLELKFVRAHPEIVRADLTKRGDTEKLAWVDEVLEMDRRARELTVAIGDLRNRRNVISRE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I QA GN + L E + L E++ +E E + +++ + +PN+ E VP+G Sbjct: 61 ISQARKAGN--DITELLAEAAGLPERIKEVETERETLTEAVRYRLMRLPNILHESVPVGK 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ IR G+ H + G DF+RA K++G+ F L G LA L+ A Sbjct: 119 DDSENVEIRRWGEPEIPAFDLENHGALAVEHGWADFERAAKIAGSGFYFLKGRLALLDMA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L +F +D+ EHGYT + P ++ A G + F + M+ + +LI TSE + Sbjct: 179 LQRFAMDI-LVEHGYTPIIPPYMMNRAAYEGVTDLADFENVMYRIDGEDEYLIATSEHPM 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +Y EI E K LPLR L+P FR E G+ G DT+G+ R HQF K E E S+ Sbjct: 238 AAMYCDEIFEEKDLPLRLAGLSPCFRREIGAHGLDTKGLFRVHQFHKVEQFIYATPEQSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE +++ AEE+ +RL L YR+VS+CTGD+G A K YDLEVW+ + YRE SCS C Sbjct: 298 DLHEELMANAEEVFQRLGLPYRIVSICTGDIGTVAAKKYDLEVWMPREERYREAVSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +Q+ R+N + R+P ++ HTLN + +A R + AILEN N DGSVTIP LRP Sbjct: 358 TAYQAVRLNIKVRNPTEFTEKRYVHTLNSTAIATSRAIRAILENNQNEDGSVTIPKALRP 417 Query: 416 YMNNLAVI 423 Y+ + Sbjct: 418 YLYGSETL 425 >gi|293190704|ref|ZP_06608958.1| serine--tRNA ligase [Actinomyces odontolyticus F0309] gi|292820810|gb|EFF79769.1| serine--tRNA ligase [Actinomyces odontolyticus F0309] Length = 425 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 144/430 (33%), Positives = 227/430 (52%), Gaps = 13/430 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NPE + + R P + I+ D R ++ E +RA + S +G Sbjct: 1 MIDVRALRENPEPARASQRARGANPGLVDEIIEADVARREALQAFETLRATQKEVSKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + + + L EQ+ E + + +L +PN+ L+ VP+G Sbjct: 61 RASKEERPA----ILAQAKELAEQVKAAEAAANAADAEADRLARLLPNLVLDGVPVGGEE 116 Query: 120 NENILIRSVGKKPSA---IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +L ++H +GE L +D R K+SGARF L G A LE Sbjct: 117 DFVVLRHEGPAPRDFAAEGFEPQDHLALGEGLDAIDTKRGAKVSGARFYYLKGIGARLEL 176 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL +D +G+ + P LV + M GTG + + +D+++ D +L TSEV+ Sbjct: 177 ALMTMAMDQAL-ANGFVPMMTPTLVTPQVMGGTGFLNEHSDEIYYLPADDLYLTGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EI++ P R+ + +R EAGSAG+DTRG++R HQF K E+ S R E++ Sbjct: 236 LAGYHADEILDLSDGPKRYMGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSYCRPEEA 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+R L+ EE+L +++L YRV+ GDLG SA + +D E WL Q Y E++S S Sbjct: 296 AEEHQRFLAWEEEMLAKVELPYRVIDTAAGDLGTSAARKFDCEAWLPTQERYMEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+ R R + + TLNG+ +A R ++A LEN+ ADGS+ +P LRP Sbjct: 356 CTTFQARRLGIRERREDGMAP--VATLNGT-LATTRWIVAFLENHQQADGSIYVPEALRP 412 Query: 416 YMNNLAVIKK 425 Y+ L V+ Sbjct: 413 YLGGLEVLSP 422 >gi|255037566|ref|YP_003088187.1| seryl-tRNA synthetase [Dyadobacter fermentans DSM 18053] gi|254950322|gb|ACT95022.1| seryl-tRNA synthetase [Dyadobacter fermentans DSM 18053] Length = 430 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 158/433 (36%), Positives = 246/433 (56%), Gaps = 12/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML +IR+N E L K+H E + I+ LD + R + ++++D+ A N+ + + Sbjct: 1 MLQTNFIRENRELTIAGLTKKHFKDAEQAVDRIIELDGRRRQVQQELDDVLAASNNKAKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + G + +A K +T+ LKE+ LE+E +L + + +PN+P E VP G Sbjct: 61 IGALMKSGQKAEAEAAKADTAALKERSKALEEEHKAFEENLLQELVKLPNLPHESVPEGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALG-----LMDFDRATKLSGARFSVLTGHLA 172 SA++N+ + G KP+ + H+++ LG ++DF+ K++GA F V G A Sbjct: 121 SADDNVTVLEAGAKPALHEGALPHWDLIRKLGGNLAPIIDFELGNKIAGAGFPVYKGKAA 180 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPT 231 L+RA+ F + GY EV P++V ++ + TGQ+P M+ T D +LIPT Sbjct: 181 RLQRAMIAFFLSE-AGNAGYNEVQPPIVVNADSGFATGQLPDKEGQMYHATVDDLYLIPT 239 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +EV +TNLY I+ LP++ P FR EAGS G RG+ R HQF K E+V I + Sbjct: 240 AEVPVTNLYRDVIVAESELPVKNVAFTPCFRREAGSWGAHVRGLNRLHQFDKVEIVQINK 299 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS+ + M+ + +L++L+L YR++ LC GD+GF++ TYD EVW AGQ + E S Sbjct: 300 PEDSYKALDEMVEHVKMLLEKLELPYRILRLCGGDMGFTSALTYDFEVWSAGQGRWLECS 359 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S S +Q+ R+ RY++ + K + HTLNGS +A+ R L A+LEN DG+V +P Sbjct: 360 SVSNFETYQANRLKLRYKNAD-KKTQLLHTLNGSALALPRILAALLENNQQPDGTVKVPA 418 Query: 412 VLRPYMNNLAVIK 424 VL P+ VI+ Sbjct: 419 VLVPFC-GFDVIE 430 >gi|123966593|ref|YP_001011674.1| seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] gi|166222763|sp|A2BXQ6|SYS_PROM5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123200959|gb|ABM72567.1| Seryl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] Length = 425 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 173/422 (40%), Positives = 252/422 (59%), Gaps = 8/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + IR+NP ++ L R I + + + + KI +++ S IGQ Sbjct: 1 MLDQKLIRENPTFVENNLSLRGKFYDIHSIHKITVERKEIDIKISSLQSESKKLSKIIGQ 60 Query: 61 AIAEGNLS---LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I N + ++ LK + + + ++ E+++ + ++ I +PN P ++ P G Sbjct: 61 EIRNPNNANSQELNKLKEQGNKYRIKVSEFEEKKRILDQQIRDEILKLPNFPSKDAPFGE 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + NI I+ G P + H+EIGE L L D ++TK++ +RF L+G+ A LERA Sbjct: 121 NESNNIQIKEWG-DPLKKDNLKTHWEIGENLKLFDSIKSTKIAKSRFITLSGNGARLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSL 236 L FM+D+H S +GY E+ P LV E++ G+GQ+PKF+ + C D WL PT+EV L Sbjct: 180 LINFMLDVH-SNNGYLELMPPALVNSESLQGSGQLPKFSNESFKCANDDLWLSPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T + +EII+ K LPL++ +P FR EAGS GRDT+G++R HQF K EL + S Sbjct: 239 TAFHKNEIIDPKLLPLKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYWFSDPNKSL 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ + + AE ILK+L+L YR+V +CTGDLGFS+ +T+DLEVWL YREISSCS C Sbjct: 299 EAHKEITADAESILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSNKCYREISSCSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR + R + K + HTLNGSG+A+GR + AILEN DGSV IP VL PY Sbjct: 359 RDFQARRSSIRTKI--DKKTSYIHTLNGSGLAIGRTMAAILENGQRPDGSVKIPDVLVPY 416 Query: 417 MN 418 Sbjct: 417 FG 418 >gi|222475249|ref|YP_002563665.1| seryl-tRNA synthetase (serS) [Anaplasma marginale str. Florida] gi|222419386|gb|ACM49409.1| seryl-tRNA synthetase (serS) [Anaplasma marginale str. Florida] Length = 437 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 206/430 (47%), Positives = 273/430 (63%), Gaps = 5/430 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 DI+ I+++PE D A+ R Q+E I+ LD K R + + +R +RN+ + ++ Sbjct: 10 HDIELIKKDPELFDRAMISRGFGEQAEKIIELDLKKRGELSTLYSLREQRNAVTREVALL 69 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 G + L E++ LE + + L L+ +PNVP VP+G + Sbjct: 70 KRSGI--ECTPQIEASKKLAEEIETLEH-SIKEDTKLSNLLESLPNVPDPIVPVGKDESH 126 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 N+ +RS G++ R H+E+GE L L+DF RA LSGARFS+L G LA LERAL F Sbjct: 127 NVEVRSHGQRRDFAFGIRPHYELGEMLNLLDFKRAAVLSGARFSILKGQLAELERALASF 186 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS 241 M+D+HT E GYTE+S P+LV + MY GQ+PKF DD F TT+ L PTSEV+L NL S Sbjct: 187 MLDMHTKEFGYTEISHPVLVNERTMYNVGQLPKFHDDSFRTTNNFRLAPTSEVALANLVS 246 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + SLP+RFT + FR+EAGSAG DTRGM+RQHQF K ELVSIT + S E ER Sbjct: 247 GTTLPRDSLPMRFTAYSQCFRAEAGSAGLDTRGMMRQHQFGKVELVSITTSDASNAELER 306 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 M S AEE+LKRL+L YRV+ LC+GD+GFSA +YDLEVW+ Q+ YREISSCS C +FQ+ Sbjct: 307 MTSIAEEVLKRLELPYRVMLLCSGDMGFSASISYDLEVWMPAQDKYREISSCSNCRDFQA 366 Query: 362 RRMNSRYRDPNSKSLK--FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 RRM ++Y +K HTLNGS +A+GR + AI+ENY N DGS+TIP VLR Y Sbjct: 367 RRMGAKYFFFENKKKHSTLVHTLNGSALAIGRTIAAIMENYQNEDGSITIPDVLRKYTGT 426 Query: 420 LAVIKKEHIL 429 A+++ E L Sbjct: 427 SAIMRAEDAL 436 >gi|3355717|emb|CAA73496.1| seryl-tRNA synthetase [Zea mays] Length = 489 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 141/441 (31%), Positives = 231/441 (52%), Gaps = 21/441 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N + + ++ R+ + + L ++ L K++E +RA RN+ + + Sbjct: 52 IDFKWIRDNRDAVADNIRTRNSTANLDLVFELYDQYLTLQKEVERLRAERNAVA---NKM 108 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + S+ AL E LKE L LE++ ++ L+ IPN +VP+G + Sbjct: 109 KGKLDPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDVPVGGEESS 168 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 +L + VG + S ++H ++G+ L L DFD A ++SG++F L LE AL + Sbjct: 169 -VLRKEVGSQRSFNFAIKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVIW 227 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTNLY 240 I S+ G+T + P +VR + G ++ D + LI T+E+ + ++ Sbjct: 228 AISE-VSKKGFTPLITPEIVRSSVVEKCGFSKGKNTQVYSIEDSDQCLIGTAEIPVGGIH 286 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I+ +LPL++ + FR+EAG+AG TRG+ R HQF K E+ R E+S HE Sbjct: 287 MDSILAESALPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESGKWHE 346 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +++ E++ L LH++ + + TGDLG A + +D+E W+ G Y EISS S C ++Q Sbjct: 347 ELITIEEDLYASLGLHFKTLDMATGDLGAPAYRKFDIEAWMPGLERYGEISSASNCTDYQ 406 Query: 361 SRRMNSRYR----------DPNSK-----SLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 SRR+ RYR K +F HTLN + VAV R ++ ILEN+ DG Sbjct: 407 SRRLGIRYRPSPSEPPSTSTKKGKGAASGPTQFVHTLNATAVAVPRLIVCILENFQQGDG 466 Query: 406 SVTIPTVLRPYMNNLAVIKKE 426 S+ +P LRPYM L ++ + Sbjct: 467 SIVVPEPLRPYMGGLELLSPK 487 >gi|296268069|ref|YP_003650701.1| seryl-tRNA synthetase [Thermobispora bispora DSM 43833] gi|296090856|gb|ADG86808.1| seryl-tRNA synthetase [Thermobispora bispora DSM 43833] Length = 421 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 161/427 (37%), Positives = 244/427 (57%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ L + + R + + +LSLDE+ R + + E +RA + + Sbjct: 1 MIDLRTLREDPDRLRASQRARGEDETVVDRLLSLDERRRTALTRFESLRAEQKRLGKSVS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A AL + L ++ E E + L +L+ +PN+ E P G Sbjct: 61 RASG----DERQALLDRAKELAAEVKAAEAEAEALGQELDELLMTVPNIVEEGAPQGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L VG+ P+ R+H E+GE LG +D DR K+SGARF LTG A L L Sbjct: 117 DFVVLEH-VGEPPTFDFTPRDHVELGELLGAIDIDRGAKVSGARFYYLTGAGARLVHGLL 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI-PKFADDMFCTTDGRWLIPTSEVSLTN 238 + E G+T V P+LV+ EAM GTG + A+ D +L+ TSEVSL Sbjct: 176 TMAM-HQAIEAGFTPVIPPVLVKPEAMAGTGFLGAHSAEVYRLEADDLYLVGTSEVSLAA 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+++ +LPLR+ + FR EAGS G+DTRG++R HQF K E+ S R ED+ E Sbjct: 235 YHADEILDAAALPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFSFCRPEDAHEE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L +++L ++++ YRVV + TGDLG SA + YD E WL Q YRE++S S C + Sbjct: 295 HLRLLGWQKQMLDKIEVPYRVVDIATGDLGTSAARKYDCEAWLPSQGRYRELTSTSNCTD 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD + + + TLNG+ +A R ++AILEN+ DGSV +P LRPY+ Sbjct: 355 FQARRLRVRYRDEDG-TTRHVATLNGT-LATTRWIVAILENHQQRDGSVVVPKALRPYV- 411 Query: 419 NLAVIKK 425 L V++ Sbjct: 412 GLDVLEP 418 >gi|56388116|gb|AAV86703.1| seryl-tRNA synthetase [Anaplasma marginale str. St. Maries] Length = 437 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 206/430 (47%), Positives = 273/430 (63%), Gaps = 5/430 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 DI+ I+++PE D A+ R Q+E I+ LD K R + + +R +RN+ + ++ Sbjct: 10 HDIELIKKDPELFDRAMISRGFGEQAEKIIELDLKKRGELSTLYSLREQRNAVTREVALL 69 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 G + L E++ LE + + L L+ +PNVP VP+G + Sbjct: 70 KRSGI--ECTPQIEASKKLAEEIATLEH-SIKEDTKLSNLLESLPNVPDPIVPVGKDESH 126 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 N+ +RS G++ R H+E+GE L L+DF RA LSGARFS+L G LA LERAL F Sbjct: 127 NVEVRSHGQRRDFAFGIRPHYELGEMLNLLDFKRAAVLSGARFSILKGQLAELERALASF 186 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS 241 M+D+HT E GYTE+S P+LV + MY GQ+PKF DD F TT+ L PTSEV+L NL S Sbjct: 187 MLDMHTKEFGYTEISHPVLVNERTMYNVGQLPKFHDDSFRTTNNFRLAPTSEVALANLVS 246 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + SLP+RFT + FR+EAGSAG DTRGM+RQHQF K ELVSIT + S E ER Sbjct: 247 GTTLPRDSLPMRFTAYSQCFRAEAGSAGLDTRGMMRQHQFGKVELVSITTSDASNAELER 306 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 M S AEE+LKRL+L YRV+ LC+GD+GFSA +YDLEVW+ Q+ YREISSCS C +FQ+ Sbjct: 307 MTSIAEEVLKRLELPYRVMLLCSGDMGFSASISYDLEVWMPAQDKYREISSCSNCRDFQA 366 Query: 362 RRMNSRYRDPNSKSLK--FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 RRM ++Y +K HTLNGS +A+GR + AI+ENY N DGS+TIP VLR Y Sbjct: 367 RRMGAKYFFFENKKKHSTLVHTLNGSALAIGRTIAAIMENYQNEDGSITIPDVLRKYTGA 426 Query: 420 LAVIKKEHIL 429 A+++ E L Sbjct: 427 SAIMRAEDAL 436 >gi|296137899|ref|YP_003645142.1| seryl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] gi|296026033|gb|ADG76803.1| seryl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] Length = 417 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 146/427 (34%), Positives = 233/427 (54%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + + R + + +L D R + +++RA ++S IG Sbjct: 1 MIDVKLLRENPDLVRASQRARGEDAALVDALLEADAHRRAAVLAADNLRAEHKTSSKSIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E +LV A L ++ E E+ + I NV +E VP G Sbjct: 61 KAAPEERPALVAA----AGELAAKVKEAEAEQARADEVFDETARKIGNVIIEGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L ++H E+ E LGL+D +R K+SG+RF +TGH A + AL Sbjct: 117 DFEVLEHVGTIPEITD--PKDHLELAEGLGLLDMERGAKVSGSRFYFMTGHGALFQMALL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q + HG+T + P+LV+ E M GTG + AD+++ D +L+ TSEV L Sbjct: 175 QLAVQ-KAVAHGFTLMIPPVLVKPEIMGGTGFLGAHADEIYRLEADDLYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ P+R+ + FR EAGS G+DTRG++R HQF K E+ + ED+ E Sbjct: 234 YHMGEIIDLNDGPIRYAAQSSCFRREAGSYGKDTRGIIRVHQFDKIEMFVYCKPEDAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L +E+L +++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HQRLLDFEKEMLAAVEVPYRVIDVAAGDLGSSAARKFDCEAWVPSQERYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD + + + TLNG+ +A R L+AI EN+ DGSV +P L+P++ Sbjct: 354 FQARRLGVRYRDEDGR-PQIAATLNGT-LATTRWLVAIWENHQQPDGSVRVPAALQPFL- 410 Query: 419 NLAVIKK 425 V++ Sbjct: 411 GTDVLRP 417 >gi|313665727|ref|YP_004047598.1| serine--tRNA ligase [Mycoplasma leachii PG50] gi|312949962|gb|ADR24558.1| serine--tRNA ligase [Mycoplasma leachii PG50] Length = 422 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 188/427 (44%), Positives = 270/427 (63%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH---LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +I QN + + L KR+ +Y + + K + ++ K E +++R+N S + Sbjct: 1 MLDINYIEQNLDEVIQRLNKRNQQDYSEDLKYAVEKNLKRKQILVKFEALKSRKNQLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG I + D K E +L EQ+ ++ E V + + +S IPN+P +++ G Sbjct: 61 IGILIKDKKNEQADKAKAEVVSLNEQIIKIDDELRTVNDQILEKLSYIPNLPHKDIYFGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ IR + + S H++I LGL+DF++ KLSG+RF + TG + L R+ Sbjct: 121 SDEDNVEIRKSNHS-NLLKHSTPHWQIATKLGLVDFEKGVKLSGSRFLIYTGLGSKLVRS 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 + ++ H +HGY E+ PL+V M GTGQ+PKF++DM+ ++LIPTSEV LT Sbjct: 180 IADVLLKRH-EKHGYKEIFCPLIVNKSVMLGTGQLPKFSEDMYQV-GEQYLIPTSEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+++EI+ LPL++T+ FR EAGSAGRDT+GM+R HQF K ELV I E+S Sbjct: 238 NLHANEILTYDVLPLKYTSFTQCFRQEAGSAGRDTKGMIRLHQFNKVELVKIVHPEESMN 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E ++ AE++L DL YRVV LC+GD+GFS+ KTYDLEVW QN YREISSCS C Sbjct: 298 ELEMLIKDAEDVLNMFDLPYRVVELCSGDIGFSSAKTYDLEVWFPEQNKYREISSCSNCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+R M +R++D +SK +K HTLNGSGVAV R + AILENY + + + +PT+LRPY Sbjct: 358 DFQARNMQTRFKDKDSK-IKLVHTLNGSGVAVDRLIAAILENYWDGEKLI-LPTLLRPYF 415 Query: 418 NNLAVIK 424 NN IK Sbjct: 416 NNQEFIK 422 >gi|185178824|ref|ZP_02964612.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024432|ref|ZP_02997087.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|209554387|ref|YP_002284526.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225551523|ref|ZP_03772469.1| serine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|238065110|sp|B5ZAT6|SYS_UREU1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|184209459|gb|EDU06502.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018723|gb|EDU56763.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|209541888|gb|ACI60117.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379338|gb|EEH01703.1| serine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 418 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 174/418 (41%), Positives = 254/418 (60%), Gaps = 4/418 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI IR++ + + + + I LD R L+++ +++ A++N S +IG Sbjct: 1 MFDINLIRKDIVVTKEKMLNKKVSSDLFDQIFGLDVLVRNLMQQEQNLNAKKNQLSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + + +++K +L + L KL+ IPN+P + VPIG Sbjct: 61 IL-AKNKDPKLQQTLDLVNSIKSELQDISLTLSNKQDELNKLLLVIPNMPDDSVPIGNDE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+ V + H+++ L+DFD++TK++G+RF + T A L RAL Sbjct: 120 NDNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLYRALQ 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 QF +D++ + G+ E+ AP++V E++ G+G +PKF DD+F +L PT+EV LTN Sbjct: 180 QFCLDMNV-KAGFNEIWAPVIVNQESLIGSGNLPKFVDDLFKLENSNYYLSPTAEVQLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ +EI+++ LPL +T L P FRSEAGSAGRD RG++RQHQF K ELV + + EDSF E Sbjct: 239 LHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L+L YR ++LCTGDLGFS+ KTYDLEVWL N Y+EISSCS C N Sbjct: 299 LESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTN 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR RY++ + HTLNGS +A+ R A++ENY DGS+TIP L Y Sbjct: 359 FQARRAKIRYKETVDAPTELVHTLNGSSLAIDRLWAAVVENYQQEDGSITIPKALEKY 416 >gi|315654341|ref|ZP_07907249.1| serine--tRNA ligase [Mobiluncus curtisii ATCC 51333] gi|315491376|gb|EFU80993.1| serine--tRNA ligase [Mobiluncus curtisii ATCC 51333] Length = 429 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 151/430 (35%), Positives = 239/430 (55%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ ++ NPE + + R +P + L+ DE+ R + E RA + + S QIG Sbjct: 1 MIDLRAMKDNPEPMRASQLARGNDPATVDQALAADERRRTALTAFETARAEQKAFSKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E + L + L E + LE+ ++ KK + N+ L+ VP G Sbjct: 61 SASKEERPA----LLEQAKKLSENVKALEEASNQAAEEAKKAAMALENLILDGVPSGGED 116 Query: 120 NENILIR---SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +L + + + ++H ++G L +D DR K+SGARF L G A LE Sbjct: 117 DYEVLSQEGAPIRDFTAEGFTPQDHLDLGIGLDAIDTDRGAKVSGARFYYLKGVGARLEL 176 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 A+ +D HG+T + P +V E M GTG + + +D+++ D +L TSEV+ Sbjct: 177 AILNAALDTAI-AHGFTPMITPCMVSPETMSGTGFLGEHSDEIYYLPADNLYLTGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L +++EII+ + P R+T + FR EAGS G+DTRG++R HQF K E+ S + ED+ Sbjct: 236 LAGYHTNEIIDLSAGPKRYTGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCKPEDA 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++L+ E+L +++L YR+++ GDLG SA + +D E WL QN + E++S S Sbjct: 296 VEEHQKLLNMEREMLAKVELPYRIINTAAGDLGSSAAQKFDCEAWLPTQNRFMEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+ RYRD K + TLNG+ + R ++AILEN+ ADGSV +P LRP Sbjct: 356 CTTFQARRLQIRYRDAEGK-PQVCATLNGT-LGTTRWIVAILENHQQADGSVRVPAGLRP 413 Query: 416 YMNNLAVIKK 425 Y+ L V++ Sbjct: 414 YLGGLEVLEP 423 >gi|300780262|ref|ZP_07090118.1| serine--tRNA ligase [Corynebacterium genitalium ATCC 33030] gi|300534372|gb|EFK55431.1| serine--tRNA ligase [Corynebacterium genitalium ATCC 33030] Length = 455 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 142/429 (33%), Positives = 233/429 (54%), Gaps = 18/429 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++++R+NP+ + + R +P + +L+ DE+ R I + +RA + + +IGQ Sbjct: 40 IDLKFLRENPDVVRASQHARGEDPGLVDALLAADEERRGAIATADSLRAEQKAFGKKIGQ 99 Query: 61 AIAEGNLSLVD---ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 A E +L++ LK + +E E+ ++ ++ +I P E+ + Sbjct: 100 ASPEERPALLEGSNELKTKVKEAEEAQKRAEENVVKLQYAISNVIEGAPAGGEEDFEVLE 159 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 VG+ P ++H ++GEALG++D R TK+ GARF L G A ++ Sbjct: 160 ---------HVGELPEFDFEVQDHLDLGEALGIIDMKRGTKVGGARFYYLVGDGAWMQLG 210 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 + E G+ + P+LVR E M GTG + ++++ D +L+ TSEV+L Sbjct: 211 MLMLAAQ-KAREAGFKVMVPPVLVRPEIMAGTGFLDAHDEEIYYLERDDLYLVGTSEVAL 269 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII+ PL + + FR EAGS G+DT+G+LR HQF K E+ + ED+ Sbjct: 270 AGYHRDEIIDLSDGPLLYAGWSSCFRREAGSYGKDTKGILRVHQFDKLEMFVYCKPEDAE 329 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+++L E+L +++ YR++ + GDLG SA + +D E W+ Q+ YRE++S S C Sbjct: 330 EMHQKLLGLEREMLAAVEVPYRIIDVAAGDLGSSAARKFDTEAWVPSQDTYRELTSTSNC 389 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ RR+N+RYRD + K + TLNG+ +A R L+AILEN ADGSV +P LRP+ Sbjct: 390 TTFQGRRLNTRYRDESGK-TQTAATLNGT-LATTRWLVAILENNQQADGSVVVPEALRPW 447 Query: 417 MNNLAVIKK 425 + V+ Sbjct: 448 V-GKEVLTP 455 >gi|313157393|gb|EFR56816.1| serine--tRNA ligase [Alistipes sp. HGB5] Length = 423 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 151/427 (35%), Positives = 242/427 (56%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML ++ IR + E L K+ ++ P E I +LD++ + + ++++ A +N + +I Sbjct: 1 MLTLKQIRDDKEAAIRKLAKKGVDAAPVIEKIETLDDRRKAIQVELDNTLAAQNKAAKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + +G + K + LKE+ L+ E EV L+ I +PN P E VP G + Sbjct: 61 GALMGQGRREEAEERKRFVADLKEKSNRLQAESREVQEELQAAIVTLPNFPAEIVPEGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N++++ V H+E+ ++DFD KL+GA F V G A L+RAL Sbjct: 121 AEDNLVVKLVESYTELPENPLPHWELARKYDIIDFDLGVKLTGAGFPVYKGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 + +D +T + GY EV P++V + + +GTGQ+P M+ T D +LIPT+EV +T Sbjct: 181 INYFLDCNT-KAGYLEVEPPIMVNEASGFGTGQLPDKEGQMYHATADNFYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y I++ P++ T P FR EAGS G+D RG+ R HQF K E+V ++ ++S+ Sbjct: 240 NIYRDVILDEMDFPVKMTAYTPCFRREAGSYGKDVRGLNRLHQFDKVEIVQLSLPQNSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M++ E I+K L L YR++ LC GD+ F++ TYD EV+ Q + E+SS S Sbjct: 300 ALDGMVAHVESIVKSLGLPYRILRLCGGDMSFTSALTYDFEVYSEAQKRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+ R+ RY+D + K + HTLNGS +A+ R + A+LEN+ +G + IP L PY Sbjct: 360 SFQANRLKLRYKDAD-KKTQLAHTLNGSSLALPRIVAALLENFQTPEG-IRIPEALIPYT 417 Query: 418 NNLAVIK 424 +IK Sbjct: 418 -GFDIIK 423 >gi|269958701|ref|YP_003328488.1| seryl-tRNA synthetase [Anaplasma centrale str. Israel] gi|269848530|gb|ACZ49174.1| seryl-tRNA synthetase [Anaplasma centrale str. Israel] Length = 437 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 206/430 (47%), Positives = 273/430 (63%), Gaps = 5/430 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 DI+ I+++PE D A+ R Q+E I+ LD K R + + +R +RN+ + ++ Sbjct: 10 HDIELIKKDPELFDRAMISRGFGEQAEKIIELDLKKRGELSTLYSLREQRNAVTREVALL 69 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 G + L E++ LE + + L L+ +PNVP VP+G + Sbjct: 70 KRSGI--ECTPQIEASKKLAEEIETLEH-SIKEDTKLSNLLESLPNVPDPIVPVGKDESH 126 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 N+ +RS G++ R H+E+GE L L+DF RA LSGARFS+L G LA LERAL F Sbjct: 127 NVEVRSHGQRRDFAFGIRPHYELGEMLNLLDFKRAAVLSGARFSILKGQLAELERALASF 186 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS 241 M+D+HT E GYTE+S P+LV + MY GQ+PKF DD F TT+ L PTSEV+L NL S Sbjct: 187 MLDMHTKEFGYTEISHPVLVNERTMYNVGQLPKFHDDSFRTTNNFRLAPTSEVALANLVS 246 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + SLP+RFT + FR+EAGSAG DTRGM+RQHQF K ELVSIT + S E ER Sbjct: 247 GTTLPRDSLPMRFTAYSQCFRAEAGSAGLDTRGMMRQHQFGKVELVSITTSDASNAELER 306 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 M S AEE+LKRL+L YRV+ LC+GD+GFSA +YDLEVW+ Q+ YREISSCS C +FQ+ Sbjct: 307 MTSIAEEVLKRLELPYRVMLLCSGDMGFSASISYDLEVWMPAQDKYREISSCSNCRDFQA 366 Query: 362 RRMNSRYRDPNSKSLK--FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 RRM ++Y +K HTLNGS +A+GR + AI+ENY N DGS+TIP VLR Y Sbjct: 367 RRMGAKYFFFENKKKHSTLVHTLNGSALAIGRTIAAIMENYQNEDGSITIPDVLRKYTGA 426 Query: 420 LAVIKKEHIL 429 A+++ E L Sbjct: 427 SAIMRAEDAL 436 >gi|281358189|ref|ZP_06244672.1| seryl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] gi|281315279|gb|EFA99309.1| seryl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] Length = 415 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 151/427 (35%), Positives = 233/427 (54%), Gaps = 15/427 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DI+ IR+N E + +R + +L LD R L ++ E +RA RN S + + Sbjct: 1 MIDIRLIRENSEAVRANCVRRGFPIDIDGLLKLDADARQLGQEAEALRAERNRLSKECAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +++ LKE L E+ ++ +++++ +PN+ +VP G + Sbjct: 61 ---------DPSARDKVKQLKEVLASKEEMLGKIQEKIRQVVIRMPNMLAPDVPDGLDDS 111 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR VG+ PS R+H E+GE L ++D R K++ F G A L +AL Sbjct: 112 GNVEIRKVGEIPSFDFKIRDHQELGELLDILDIPRGAKVAATGFYYWKGKGAMLAQALY- 170 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 F + E G+T P L ++ ++GTG +P FAD + + LI TSE +L Sbjct: 171 FWVQRVLVERGFTMFMTPCLAKERTLFGTGYLPFFADQTYNLVGEDLALIGTSEQTLVGY 230 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ ++++ LPL +T P FR+EAGS G+ +RG+ R HQF K E + + EDS H Sbjct: 231 HADDVLDGAELPLCYTAFTPCFRTEAGSYGKASRGIFRVHQFHKVEQIVFCKPEDSVKYH 290 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E L+ E IL++L + Y VV++C GDLG K YD+E W AG YRE++S + +F Sbjct: 291 EMCLANEEYILQQLGIPYHVVNVCVGDLGAPGYKKYDIEAWFAGFGGYREVTSNTNLTSF 350 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 QSRR+N RY+D + F HT++ + V R LIAI+EN+ ADGSV IP VLRP + Sbjct: 351 QSRRLNIRYKD--GDTRDFVHTISATAV-TDRVLIAIMENFQQADGSVVIPEVLRP-LCG 406 Query: 420 LAVIKKE 426 I+ + Sbjct: 407 FDKIEPK 413 >gi|32491238|ref|NP_871492.1| seryl-tRNA synthetase [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|30173139|sp|Q8D265|SYS_WIGBR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|25166445|dbj|BAC24635.1| serS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 429 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 175/431 (40%), Positives = 260/431 (60%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + I +N E + L R+ + IL D+K +IL ++E ++ +RN S I + Sbjct: 1 MIDHKLIIKNIEEVCKKLILRNFYLDKKKILLQDQKRKILQIEVEKLQNKRNLQSKIISK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +D KN+++ + L +++ ++ + +S IPN+ E+VPIG Sbjct: 61 IKINNKN--IDIYKNKSNKINILLNEKKQKLKKIKKEIDNYLSTIPNILDEKVPIGKDQK 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 NI ++ G + H EIGE + +DF R+ K+SG+RF V+ ++++ RAL Q Sbjct: 119 NNIEVKKWGSPKIYNFKIKSHVEIGEKIKYLDFSRSAKISGSRFVVMKNKISYMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM++LHT++HGY E P LV +YGTGQ+PKF +D F LIPT+E Sbjct: 179 FMLNLHTNQHGYEEYYVPYLVNKNMLYGTGQLPKFYNDFFYAKSFFEDIQSCYALIPTAE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V LTNL +EII+ LP++ T+ P FRSEAGS G+DT+G++R HQF K E+V I E Sbjct: 239 VPLTNLMRNEIIDENYLPIKMTSHTPCFRSEAGSYGKDTKGLIRMHQFDKVEIVQIVSPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S E + AE +L+ LDL YR + LC+GD GFS+CKTYDLEVW+ +N Y E+SSC Sbjct: 299 NSIKALEEITHHAERVLQLLDLPYRKILLCSGDTGFSSCKTYDLEVWMPSRNKYIEVSSC 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S +FQSRR RYR ++K + TH LNGS +A+ R L +I+ENY +G++ +P +L Sbjct: 359 SNTSDFQSRRTKIRYRKISNKEIHLTHILNGSALAISRTLASIIENYQTKEGNIKVPKIL 418 Query: 414 RPYMNNLAVIK 424 +PYM+ L +IK Sbjct: 419 QPYMDGLKLIK 429 >gi|188524127|ref|ZP_03004200.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867376|ref|ZP_03079380.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273528|ref|ZP_03206064.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|195660003|gb|EDX53383.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660852|gb|EDX54105.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198250048|gb|EDY74828.1| seryl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] Length = 418 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 175/418 (41%), Positives = 255/418 (61%), Gaps = 4/418 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI IR++ + + + + I LD R L+++ +++ A++N S +IG Sbjct: 1 MFDINLIRKDIVVTKEKMLNKKVSRDLFDQIFGLDVLVRNLMQQEQNLNAKKNQLSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + + +++K +L + L KL+ IPN+P + VPIG Sbjct: 61 IL-AKNKDPKLQQTLDLVNSIKSELQDISLTLSNKQDELNKLLLVIPNMPDDSVPIGNDE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+ V + H+++ L+DFD++TK++G+RF + T A L RAL Sbjct: 120 NDNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLYRALQ 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 QF +D++ + G+ E+ AP++V E++ G+G +PKFADD+F +L PT+EV LTN Sbjct: 180 QFCLDMNV-KAGFNEIWAPVIVNQESLIGSGNLPKFADDLFKLENSNYYLSPTAEVQLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ +EI+++ LPL +T L P FRSEAGSAGRD RG++RQHQF K ELV + + EDSF E Sbjct: 239 LHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L+L YR ++LCTGDLGFS+ KTYDLEVWL N Y+EISSCS C N Sbjct: 299 LESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTN 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR RY++ + HTLNGS +A+ R A++ENY DGS+TIP L Y Sbjct: 359 FQARRAKIRYKETVDAPTELVHTLNGSSLAIDRLWAAVVENYQQEDGSITIPKALEKY 416 >gi|154508150|ref|ZP_02043792.1| hypothetical protein ACTODO_00644 [Actinomyces odontolyticus ATCC 17982] gi|153797784|gb|EDN80204.1| hypothetical protein ACTODO_00644 [Actinomyces odontolyticus ATCC 17982] Length = 425 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 144/430 (33%), Positives = 227/430 (52%), Gaps = 13/430 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NPE + + R P + I+ D R ++ E +RA + S +G Sbjct: 1 MIDVRALRENPEPARASQRARGANPGLVDEIIEADAARREALQAFETLRATQKEVSKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + + + L EQ+ E + + +L +PN+ ++ VP+G Sbjct: 61 RASKEERPA----ILAQAKELAEQVKAAEAAANAADADADRLARLLPNLVVDGVPVGGED 116 Query: 120 NENILIRSVGKKPSA---IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +L ++H +GE L +D R K+SGARF L G A LE Sbjct: 117 DFVVLRHEGPAPRDFAAEGFEPQDHLALGEGLDAIDTKRGAKVSGARFYYLKGIGARLEL 176 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL +D +G+ + P LV + M GTG + + +D+++ D +L TSEV+ Sbjct: 177 ALMTMAMDQAL-ANGFVPMMTPTLVTPQVMGGTGFLNEHSDEIYYLPADDLYLTGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EI++ P R+ + +R EAGSAG+DTRG++R HQF K E+ S R ED+ Sbjct: 236 LAGYHADEILDLSGGPKRYMGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSYCRPEDA 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+R L+ EE+L +++L YRV+ GDLG SA + +D E WL Q Y E++S S Sbjct: 296 AEEHQRFLAWEEEMLAKVELPYRVIDTAAGDLGTSAARKFDCEAWLPTQERYMEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+ R R + + TLNG+ +A R ++A LEN+ ADGS+ +P LRP Sbjct: 356 CTTFQARRLGIRERREDGMTA--VATLNGT-LATTRWIVAFLENHQQADGSIYVPEALRP 412 Query: 416 YMNNLAVIKK 425 Y+ L V+ Sbjct: 413 YLGGLEVLSP 422 >gi|229818196|ref|ZP_04448478.1| hypothetical protein BIFANG_03493 [Bifidobacterium angulatum DSM 20098] gi|229784447|gb|EEP20561.1| hypothetical protein BIFANG_03493 [Bifidobacterium angulatum DSM 20098] Length = 483 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 137/431 (31%), Positives = 236/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L+ DE R ++ E RA++ +IG Sbjct: 56 MLDIQFIREHADVVKESQRKRGESVELVDEVLTSDEARRAALRDFEAARAQQ----KEIG 111 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A + L ET L +++ + + + N+ E P G Sbjct: 112 KKVAAASGDDKAKLIAETKELSKKVSEYKAAADAATGEYTTAMWKLSNIVEPEAPAGGED 171 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D +R K+ G+RF L G +A ++ A Sbjct: 172 DYVVVKKVGDIRDFAAEGFEPKDHLTLGRGVAGIDMERGVKVGGSRFYFLRGAVARMQIA 231 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 232 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 290 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI+ ++ PLR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 291 LAGMHENEILNLENGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDS 350 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE +L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 351 YKEHEHLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 410 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + S + TLNG+ +A R L+AI+EN+ DGS+ IP +R Sbjct: 411 CTEYQARRLNIRERTEDG-STRAVATLNGT-LATTRWLVAIMENHQQKDGSIEIPKAMRA 468 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 469 YMGGKEVIEPT 479 >gi|57237444|ref|YP_178457.1| seryl-tRNA synthetase [Campylobacter jejuni RM1221] gi|67461625|sp|Q5HW78|SYS_CAMJR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|57166248|gb|AAW35027.1| seryl-tRNA synthetase [Campylobacter jejuni RM1221] gi|315057812|gb|ADT72141.1| Seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 411 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 259/419 (61%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKIALEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A ++LK + S K ++ + + + + L+++ IPN+P E VP+G Sbjct: 61 TA------EDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+ ++ V PS +EHFE+GE+L +DF R K+S +RF VL A L RAL Sbjct: 115 NENVELKKVLNPPSFDFTPKEHFELGESLNWLDFIRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + G+ V+ P LV M+GTGQ+PKF +DM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S++LP++ T + FR EAGSAGRDTRG++RQHQF K ELVSIT+ E S + Sbjct: 234 LYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKTEQSDSV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN YREISS S C + Sbjct: 294 FNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP VL+ Y Sbjct: 354 FQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKYF 411 >gi|308175877|ref|YP_003915283.1| serine--tRNA ligase [Arthrobacter arilaitensis Re117] gi|307743340|emb|CBT74312.1| serine--tRNA ligase [Arthrobacter arilaitensis Re117] Length = 425 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 141/431 (32%), Positives = 232/431 (53%), Gaps = 13/431 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + +NP+ + + R + + +L+ D R I E +RA +N+ S ++G Sbjct: 1 MIDLKMLTENPDMYRASQRARGADESLIDQLLAADTARRETIATYERLRAEQNAFSKKVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A AL E L + + E + L IPN+ ++ +P G Sbjct: 61 KAKG----DERAALLAEVKELAASVKSAQAESDAAAAKCTALQRSIPNLIIDGIPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ +V + +H ++ E L +D +R K+SG+RF L G A LE A Sbjct: 117 DFTVVKHVGTVRDFKAEGFEPLDHLQLAEKLDAIDMERGAKVSGSRFYFLKGIGARLEIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 + +D+ EH + + P LVR E M GTG + D+++ D +L+ TSEV+L Sbjct: 177 MMNMALDV-AMEHEFIPMITPTLVRPETMQGTGFDVEHDDEIYKLERDNMYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 ++ EI++ +R+ + +R EAGSAG+DTRG++R HQF K E+ T E++ Sbjct: 236 AGYHADEIMDLAEGSIRYAGWSSCYRREAGSAGKDTRGIIRVHQFNKLEMFVYTSVENAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH ++L+ E++L R++L YRV+ GDLG SA + +D E W+ Q+ +RE++S S C Sbjct: 296 AEHAKLLAMEEDMLGRMELPYRVIDTAAGDLGMSAARKFDCEAWVPTQDTFRELTSTSNC 355 Query: 357 GNFQSRRMNSRYR---DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 FQ+RR+N R R D + TLNG+ +A R ++AILEN+ N DGSV +P L Sbjct: 356 TTFQARRLNIREREIIDGKPGKTRSVATLNGT-LATTRWIVAILENHQNPDGSVNVPKAL 414 Query: 414 RPYMNNLAVIK 424 +PY+ + V+K Sbjct: 415 QPYLGGIEVLK 425 >gi|42527809|ref|NP_972907.1| seryl-tRNA synthetase [Treponema denticola ATCC 35405] gi|67461817|sp|Q73KB2|SYS_TREDE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|41818637|gb|AAS12826.1| seryl-tRNA synthetase [Treponema denticola ATCC 35405] Length = 422 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 146/427 (34%), Positives = 245/427 (57%), Gaps = 10/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I++N E + +K RH+ ++ + L +K L+ +++++ RN NS + Sbjct: 1 MLDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSM-- 58 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + L ++ +KE++ +E E E +L + +S IPN+ E P+G + Sbjct: 59 -KQKLSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNMAHPEAPVGKEDS 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G P ++H ++G+ L L+DF+ TK+SG +F L LE+AL Sbjct: 118 DNLEVKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTM 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 + +++ +HG+ P + ++E +YG G P+ + +G L+ T+E++L Sbjct: 178 YGLNI-LRKHGFKPFITPDIAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EII+ +SLPL++ L+ FR EAG+AG+ ++G+ R HQF K E+ E+S Sbjct: 237 YHSDEIIKKESLPLKYCGLSHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDAL 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN--LYREISSCSTC 356 HE + EEI L + +RVV CTGDLG A + +DLE W+ G+N + E++S S C Sbjct: 297 HEELRLIEEEIFNGLGIPFRVVDTCTGDLGAPAYRKWDLEAWMPGRNGGEWGEVTSTSNC 356 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+RR+N RY+D + K+ KF HTLNG+ +A+ R +IA+LENY ADGS+ IP L PY Sbjct: 357 TDYQARRLNIRYKDDDGKN-KFLHTLNGTALAMSRAMIAVLENYQQADGSIKIPEALVPY 415 Query: 417 MNNLAVI 423 I Sbjct: 416 C-GFDRI 421 >gi|227547744|ref|ZP_03977793.1| seryl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] gi|227080183|gb|EEI18146.1| seryl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] Length = 419 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 148/429 (34%), Positives = 239/429 (55%), Gaps = 12/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+N + + + + R +PQ + +L DE+ R I+ +++R+ + + +IG Sbjct: 1 MIDLKFLRENADVVRESQRARGEDPQLVDQLLEADERRRSSIQAADELRSEQKAFGKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L ++ LK ++ E + E ++ KL I NV Sbjct: 61 QAAPEDRPA----LLEGSNELKARVKEAEAAQDEAEEAVAKLQLRIANVVEGAP--AGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + ++I VG+ P R+H ++GEALG++D R TK+ GARF L G A L+ + Sbjct: 115 EDFVVIEHVGEIPEFDFEVRDHLDLGEALGIIDMKRGTKVGGARFYYLVGDGAWLQLGML 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 E G+T V P+LVR + M GTG + ++++ D +L+ TSEV+L Sbjct: 175 MLAAQ-KAREAGFTVVIPPVLVRPDIMAGTGFLDAHDEEIYYLERDDMYLVGTSEVALAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EII+ PL + + FR EAGS G+DT+G+LR HQF K E+ ED+ Sbjct: 234 YHSGEIIDLSDGPLLYAGWSSCFRREAGSYGKDTKGILRVHQFDKLEMFVYCAPEDAEEM 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H ++L ++L +++ YR++ + GDLG SA + +D E W+ QN YRE++S S C Sbjct: 294 HRKLLQLERDMLSAVEVPYRIIDVAAGDLGSSAARKFDTEAWVPSQNTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD + K + TLNG+ +A R L+AILEN ADGSV +P LRP++ Sbjct: 354 FQARRLATRYRDASGK-TQTAATLNGT-LATTRWLVAILENNQRADGSVVVPEALRPWV- 410 Query: 419 NLAVIKKEH 427 V++ + Sbjct: 411 GKDVLEVQQ 419 >gi|223041022|ref|ZP_03611280.1| seryl-tRNA synthetase [Campylobacter rectus RM3267] gi|222877694|gb|EEF12817.1| seryl-tRNA synthetase [Campylobacter rectus RM3267] Length = 414 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 182/418 (43%), Positives = 261/418 (62%), Gaps = 7/418 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M++++ + + L+ ++++P+ +L+ + + + +E+ +A +N+ S ++G Sbjct: 1 MINLKLLDTRYDEFVKKLQGKNVKPEVLNELLTTFNELKAKRQALENFQAIQNAKSKELG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 I N D LKNE + K + L+ + S +PN+ ++VP G Sbjct: 61 --IKARNGENTDELKNELNLNKTAMSDAADIVRAYEEKLENIASGVPNITDDDVPFGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +++V + +EH+E+GE+LG +DF+R KLSG+RF VL G A L RAL Sbjct: 119 DDNVCVKTVLEPTKFDFAPKEHYELGESLGWLDFERGVKLSGSRFCVLKGMGARLSRALV 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + S G+ V+ P LV +YGTGQ+PKF +D++ D +LIPTSEV +TN Sbjct: 179 NYMIDFN-SARGFELVNVPFLVNSNTLYGTGQLPKFEEDLYKVQDEDLYLIPTSEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY+ EI+ +SLP++ T + FR EAGSAGRDTRGM+RQHQF K ELVSIT E S Sbjct: 238 LYNDEILPVESLPIKMTCYSACFRKEAGSAGRDTRGMIRQHQFEKVELVSITTPEQSAQM 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M++CA ++L L L +R + LC+GDLGFSA KT DLEVWL GQN YREISS S + Sbjct: 298 LDEMVACASDLLTSLGLPHRHMLLCSGDLGFSAAKTIDLEVWLPGQNKYREISSVSNTRD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR RY+D K HTLNGS +AVGR LIAI+ENY ADGS+ IP VL+ Y Sbjct: 358 FQARRAKIRYKD--GKKNALAHTLNGSSLAVGRTLIAIMENYQKADGSIEIPEVLKGY 413 >gi|194701166|gb|ACF84667.1| unknown [Zea mays] gi|195621762|gb|ACG32711.1| seryl-tRNA synthetase [Zea mays] Length = 458 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 137/442 (30%), Positives = 220/442 (49%), Gaps = 15/442 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R NP+ + + + R + + +++LD+ R +++ IR N+ S Sbjct: 1 MLDINLFRTDKGGNPDLIRESQRSRFASVELVDEVIALDKAWRERQFELDKIRQELNATS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ A L T +K++L E E E S+L ++ I N+ E VP+ Sbjct: 61 KKIGKLKASKQEEEAKKLMESTDEIKKRLAAKEVEVQEAKSTLDAKVTTIGNIVHESVPV 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N ++R+ G+K +L + H ++ L ++ ++ ++G R L L Sbjct: 121 SDDEANNKIVRTFGEKRVEDNL-KNHVDLCRMLDIVALEKGADVAGGRGFYLKDEGVLLN 179 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 AL F + + G+ + P +R E M Q+ +F ++++ T + ++LI TS Sbjct: 180 LALINFGLAF-LRKRGFKPMQTPFFMRKETMAKCAQLAQFDEELYKVTGDGEDKYLIATS 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+++ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 239 EQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSP 298 Query: 293 E--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 DS+ HE ML +E+ K + L Y+VVS+ +G L +A K YDLE W +RE+ Sbjct: 299 NGNDSWEIHEEMLKNSEDFYKEIGLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTFREL 358 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C +FQSRR+ Y + + +S +F H LN + A R L ILEN+ DG V Sbjct: 359 VSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKEDG-VE 417 Query: 409 IPTVLRPYMNNLAVIKKEHILE 430 +P L+PYM + + + L+ Sbjct: 418 VPKALQPYMGGIEFLPFKQPLD 439 >gi|160932444|ref|ZP_02079834.1| hypothetical protein CLOLEP_01279 [Clostridium leptum DSM 753] gi|156868403|gb|EDO61775.1| hypothetical protein CLOLEP_01279 [Clostridium leptum DSM 753] Length = 428 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 151/433 (34%), Positives = 242/433 (55%), Gaps = 13/433 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLDI+ IR + E + ++KR +L+ + IL +D+K R L ++E +A +N++S +I Sbjct: 1 MLDIKMIRTDGEKVKERIRKREMNLDSIVDEILDIDKKRRELTGEVESKKAEQNADSKKI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 Q G L L ++ + + E+ K L+ +PN+P E+V Sbjct: 61 PQLKKAG--EDTAPLMERMKALSAEIKEGDAKLAELEEKQKDLLLSLPNLPDEDVC-AGG 117 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N IR ++P + + H E+ E LG++D+ R K++GA + G + LE AL Sbjct: 118 KEQNQPIRYFKEQPKFDYEPKNHVELCEGLGMIDYQRGAKIAGAGSWLYRGWGSRLEWAL 177 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----RWLIPTSE 233 F ++ H + GY + P ++ E Y GQ PKF D+++ + ++++PT+E Sbjct: 178 LNFFVNEHIKD-GYEFILPPHMLGYECGYVAGQFPKFGDEVYWIENPTSSDRKFMLPTAE 236 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +L N++ EI+ + LP ++ P +R EAGS + RGM+R HQF K E+V T E+ Sbjct: 237 TALVNIHRDEILSEEDLPRKYIAYTPCYRREAGSYRAEERGMIRGHQFNKVEMVQYTTED 296 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E ++ AE +++ L LHYR+ L GD FS +TYD+EVW+ +Y+E+SS Sbjct: 297 QSDAAFEELVGKAERLVQELGLHYRLSKLAAGDCSFSMARTYDIEVWIPSMGIYKEVSSA 356 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S ++Q+RR N +YR + K L HTLN SG+A R + AI+E Y N DGSVT+P VL Sbjct: 357 SNARDYQARRGNVKYRGAD-KKLHLAHTLNASGLATSRVIPAIVEQYQNDDGSVTVPEVL 415 Query: 414 RPYMNNLAVIKKE 426 RPY+ + I+K+ Sbjct: 416 RPYL-GIDRIEKQ 427 >gi|319901328|ref|YP_004161056.1| seryl-tRNA synthetase [Bacteroides helcogenes P 36-108] gi|319416359|gb|ADV43470.1| seryl-tRNA synthetase [Bacteroides helcogenes P 36-108] Length = 424 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 234/427 (54%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N + + L+K+ + + E +L L+ K R ++ + NS S Sbjct: 1 MLTIKQITENTDAVIRGLEKKHFKNAKETIEQVLELNNKRRNTQTSLDKNLSEVNSLSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG + K+ + LKE L+ + + + L+ ++ IPN+P +EVP G Sbjct: 61 IGQLMKEGKKEDAEGAKSRVAELKEANKNLQADMDQAATDLQNVLYTIPNIPYDEVPEGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 SA +N++++ G + + H+E+ + ++DFD K++GA F V G A L+RA Sbjct: 121 SAEDNVVVKMGGMENELPKDALPHWELTKKYDIIDFDLGVKITGAGFPVYKGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARTSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTECFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +LK+L+L YR++ LC GD+ F++ YD EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLKKLELPYRILRLCGGDMSFTSSICYDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRTAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVI 423 +I Sbjct: 418 C-GFEMI 423 >gi|255323412|ref|ZP_05364543.1| seryl-tRNA synthetase [Campylobacter showae RM3277] gi|255299449|gb|EET78735.1| seryl-tRNA synthetase [Campylobacter showae RM3277] Length = 414 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 181/419 (43%), Positives = 264/419 (63%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M++++ + + L+ ++++P+ +L+ + + + +E+ +A +N+ S ++G Sbjct: 1 MINLKLLDTRYDEFVKKLQGKNVKPEVLNELLTTFNELKAKRQALENFQAIQNAKSKELG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 I N D LKNE + K + + L+ + SC+PN+ ++VP G Sbjct: 61 --IKARNGENTDELKNELNLNKAAMGDAAEIVRAYEEKLENIASCVPNITDDDVPFGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ +++V + +EH+E+GE+LG +DF+R KLSG+RF VL G A L RAL Sbjct: 119 DDNVCVKTVLEPTKFDFAPKEHWELGESLGWLDFERGVKLSGSRFCVLKGMGARLSRALV 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +MID + + G+ V+ P LV +YGTGQ+PKF DD++ + +LIPTSEV +TN Sbjct: 179 NYMIDFN-NARGFELVNVPFLVNANTLYGTGQLPKFEDDLYKAQGEDLYLIPTSEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY+ EI+ +SLP++ T + FR EAGSAGRDTRGM+RQHQF K ELV+IT E S Sbjct: 238 LYNDEILPVESLPIKMTCYSACFRKEAGSAGRDTRGMIRQHQFEKVELVAITTPELSAQM 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M++CA ++L L L +R + LC+GDLGFSA KT DLEVWL GQN YREISS S + Sbjct: 298 LDEMVACASDLLTSLGLPHRHMLLCSGDLGFSAAKTIDLEVWLPGQNKYREISSVSNTRD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY+D K +TLNGS +AVGR LIAI+ENY ADGS+ IP VL+ YM Sbjct: 358 FQARRAKIRYKD--GKKNALVNTLNGSSLAVGRTLIAIMENYQKADGSIEIPEVLKRYM 414 >gi|315608195|ref|ZP_07883187.1| serine--tRNA ligase [Prevotella buccae ATCC 33574] gi|315250164|gb|EFU30161.1| serine--tRNA ligase [Prevotella buccae ATCC 33574] Length = 429 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 146/422 (34%), Positives = 236/422 (55%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H + E +L++D + R +K + + N S Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFDGAREAIEKVLAIDTRRRDAQQKFDLNKQEANRLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + G +A+K + + LK L++E+ + L + + IPN+P E+VP G Sbjct: 61 IGALMKSGKNEEAEAVKMKVAELKTTSNELKEEQEKAEKELVEQLCAIPNIPHEDVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++++ G+KP + H+++ + L+DFD K++GA F V G +A +RA Sbjct: 121 DACDNVVVKEGGEKPELPAGALCHWDLLKKYNLVDFDLGVKITGAGFPVYLGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F ++ + GY EV P +V + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLEE-ARKAGYLEVQPPFVVNQASGYGTGQLPDKEGQMYHANLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I E S+ Sbjct: 240 TNIFRDEILDEKELPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ML+ E +L++L+L Y ++ LC GD+ F++ YD E W A Q + E+SS S Sbjct: 300 DSLNEMLNHVEGLLQKLELPYHILRLCGGDMSFTSAICYDFETWSAAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RYR + K ++ HTLNGS +A+ R + I+EN +G + +P VL PY Sbjct: 360 ESYQANRLKCRYRHSDDKKIELCHTLNGSALALPRIVATIIENNQMPEG-IRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|282879624|ref|ZP_06288355.1| serine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] gi|281306572|gb|EFA98601.1| serine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] Length = 429 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 144/431 (33%), Positives = 237/431 (54%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYI---LSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H E E I L +D+K R +K++ + N S + Sbjct: 1 MLTLKLISEETERVVKGLEKKHFENAKETIAQALDIDKKRRESQQKLDKNKQEANQLSKK 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + + + + +K + + LK++ L+ L +L+ IPN+P +VP G Sbjct: 61 IGGLMKDKKMDEANEIKAQVADLKKEAKSLQDAMETAEHELTELLCTIPNIPNADVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N++++ G P + H+++ + L+DFD K++GA F + G +A +RA Sbjct: 121 DASDNVVVKEGGVIPDLPDDALCHWDLCKKYNLIDFDLGVKITGAGFPIYIGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F ++ + GY EV P +V + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLEE-ARKAGYLEVQPPFVVNQASGYGTGQLPDKEGQMYHVQLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ I++ K LP++ + FR EAGS G+D RG+ R HQF K ELV I R E S+ Sbjct: 240 TNIFRDVILDEKDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVELVRIDRPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ML+ E + ++L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 QSLQEMLNHVEGLCQKLELPYHILKLCGGDMSFTSSICYDFEVWSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR + ++ HTLNGS +A+ R + +ILEN +G + +P L PY Sbjct: 360 ETYQANRLKCRYRHTDDGKIELCHTLNGSALALPRIVASILENNQTPNG-IRVPKALVPY 418 Query: 417 MNNLAVIKKEH 427 +I ++ Sbjct: 419 C-GFEMIDDQN 428 >gi|157165746|ref|YP_001466225.1| seryl-tRNA synthetase [Campylobacter concisus 13826] gi|166201243|sp|A7ZBR7|SYS_CAMC1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|112801531|gb|EAT98875.1| seryl-tRNA synthetase [Campylobacter concisus 13826] Length = 414 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 179/419 (42%), Positives = 263/419 (62%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M++++ + N + L+ ++++ + +L + + K +E+ +A +N+ S ++G Sbjct: 1 MINLKLLETNYDEFVKKLEGKNVKASLLDELLHTFNELKQKRKALENFQAIQNAKSKELG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 G V LK+E + K L ++ + L+++ +PN+ ++VP G Sbjct: 61 VKARAG--EDVSELKSELNLNKAALADADEIVKQYEEKLEQISFSVPNITDDDVPFGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I++V + +EH+E+GE+LG +DF+R KLSG+RF+VL G A L RAL Sbjct: 119 NDNVCIKTVLEPTKFDFKPKEHWELGESLGWLDFERGAKLSGSRFTVLRGMGARLGRALV 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + S G+ V+ P LV ++GTGQ+PKF +D++ D +LIPTSEV +TN Sbjct: 179 NYMIDFN-SARGFELVNVPYLVSSNTLFGTGQLPKFEEDLYKVRDEDLYLIPTSEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY+ IIE++ LP++ T + FR EAGSAGRDTRGM+RQHQF K ELVSIT+ + S Sbjct: 238 LYNDTIIEAEQLPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELVSITKPDQSEGV 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 M+SCA ++L L L +R + LC+GDLGFSA KT DLEVWL GQ YREISS S + Sbjct: 298 LAEMISCASDLLTSLGLPHRHMLLCSGDLGFSAAKTIDLEVWLPGQGKYREISSISNTRD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR R++D K +TLNGS +AVGR LIAI+ENY ADG++ IP VL+ YM Sbjct: 358 FQARRAKIRFKD--GKKNMLVNTLNGSSLAVGRTLIAIMENYQKADGTIEIPEVLKRYM 414 >gi|329766549|ref|ZP_08258092.1| seryl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136804|gb|EGG41097.1| seryl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 420 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 151/419 (36%), Positives = 246/419 (58%), Gaps = 4/419 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + I+ N + + +K R++E + ++ +D+K R I K +++R ++N + +I Q Sbjct: 1 MLDPKIIKDNHQMIREMIKARNVEYDFDELIDVDQKRREFIIKTDELRKKKNQIAMEISQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +E + +L LE + E+ L IPN+ E VP+G Sbjct: 61 KKKAGQ--DISSTLDEMKNISAELAKLETLQIEIEKKYSSLALSIPNLIHESVPLGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N I+ GK P +H +I E L L+D +RA K++GARF L L L ++L Sbjct: 119 ANKEIKKWGKIPEFDFKINDHIDISENLDLVDLERAAKVAGARFYYLKNDLVRLNQSLIH 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 + +D ++ Y+ + P ++ ++M G F + ++ + ++I TSE ++ + Sbjct: 179 YALDFLAEKN-YSLIQPPYMINRQSMEGAVIANDFEEVIYKIENEDLYMIGTSEHAMAAM 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EIIE K LPLR+ ++P FR EAG+ GRD +G+ R HQF K E TR ++S+ EH Sbjct: 238 HSDEIIEGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVFTRPDESWDEH 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+MLS AEE ++L++ Y+V+ L +GD+G + KTYD+E W+AGQN YREI SCS C ++ Sbjct: 298 EKMLSNAEEFYQKLEIPYKVLLLSSGDMGKVSAKTYDIEAWMAGQNAYREIVSCSNCLDY 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RR+ R+RD ++ ++ HTLN + +A R L++I+EN+ DG +TIP VL+ YM Sbjct: 358 QARRLKIRFRDKTNEDTQYLHTLNSTLIATSRVLVSIMENFQTKDGHITIPKVLQKYMG 416 >gi|222823544|ref|YP_002575118.1| seryl-tRNA synthetase [Campylobacter lari RM2100] gi|254783014|sp|B9KFN2|SYS_CAMLR RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|222538766|gb|ACM63867.1| seryl-tRNA synthetase [Campylobacter lari RM2100] Length = 411 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 179/419 (42%), Positives = 253/419 (60%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKLLQNNFDEIAQKLKAKKVDENLLKELSDLFINLKKEKALLEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A ++LK + S KE++ K +E+ L ++ IPN P + VP G Sbjct: 61 TA------QDKESLKAQLSQNKEKINAQSKIVNELEEKLGQIALAIPNTPDDCVPFGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ ++ V PS +EH ++GE L +DF R K+S +RF VL A L RAL Sbjct: 115 DENVELKKVLTPPSFDFEIKEHHDLGEKLNWLDFTRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 +MID + G+ V+ P LV MYGTGQ+PKF DDM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFELVNVPFLVNGATMYGTGQLPKFKDDMYKVENDDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS+EI+ + LPL+ T + FR EAGSAG+DTRG++RQHQF K ELVSI + + S Sbjct: 234 LYSNEILTQEELPLKMTCYSACFRQEAGSAGKDTRGIIRQHQFEKVELVSICKPDQSELM 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E ML+CA ++L L L +R + LCTGDLGFSA KT DLEVWL QN YREISS S C + Sbjct: 294 FEEMLNCASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPSQNKYREISSVSNCKD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR R+++ K+ + HTLNGS +AVGR L+AI+ENY DG++ IP VLR Y Sbjct: 354 FQARRAKIRFKNDKGKN-ELVHTLNGSSLAVGRTLVAIMENYQEKDGNIRIPDVLRKYF 411 >gi|268610516|ref|ZP_06144243.1| seryl-tRNA synthetase [Ruminococcus flavefaciens FD-1] Length = 430 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 136/428 (31%), Positives = 218/428 (50%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ IR NPE + +KK+ + + + ++ LD++ R +++R RN S + Sbjct: 1 MIDIKLIRTNPELVKENIKKKFQDEKLELVDKVIELDKQYRETKLACDNLRNTRNVKSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + G + K E S L ++L E+ E ++ + +++++ IPN+ + VPIG Sbjct: 61 IGGFMKNGQKDEAEKAKAEVSALGKELEEKEQLEVKLEADIREIMLVIPNIIDDSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ H +I E + +D D A K SG F L G +A L+ Sbjct: 121 DDSENVEVEKFGEPAVPDFEVPYHVDIMENVNGIDIDSARKTSGNGFYYLCGDIAQLQSC 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + G + M+ + +LI TSE S+ Sbjct: 181 ILSYARDFMI-DKGFTYYIPPFMIRSNVVTGVMSFAEMEGMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + I+ + LP T+ +P FR E G+ G + RG+ R HQF K E+V + + E+S Sbjct: 240 IGKFIDTIVPEEELPKTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVVVCKPEESM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ S E + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 DWFHKLYSYTVEFFRTLDIPVRTLECCSGDLADLKVKSIDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + F HTLN + VA R LIA LEN LN DGS+ IP L+PY Sbjct: 360 GDAQARRLGIRVKAADGSKY-FAHTLNNTVVAPPRMLIAFLENNLNEDGSIRIPKALQPY 418 Query: 417 MNNLAVIK 424 M +IK Sbjct: 419 MR-KDIIK 425 >gi|288925843|ref|ZP_06419774.1| serine--tRNA ligase [Prevotella buccae D17] gi|288337498|gb|EFC75853.1| serine--tRNA ligase [Prevotella buccae D17] Length = 429 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 146/422 (34%), Positives = 236/422 (55%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H + E +L++D + R +K + + N S Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFDGAREAIEKVLAIDTRRRDAQQKFDLNKQEANRLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + G +A+K + + LK L++E+ + L + + IPN+P E+VP G Sbjct: 61 IGALMKSGKNEEAEAVKMKVAELKTTSNELKEEQEKAEKELVEQLCAIPNIPHEDVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++++ G+KP + H+++ + L+DFD K++GA F V G +A +RA Sbjct: 121 DACDNVVVKEGGEKPELPADALCHWDLLKKYNLVDFDLGVKITGAGFPVYLGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F ++ + GY EV P +V + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLEE-ARKAGYLEVQPPFVVNQASGYGTGQLPDKEGQMYHANLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I E S+ Sbjct: 240 TNIFRDEILDEKELPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ML+ E +L++L+L Y ++ LC GD+ F++ YD E W A Q + E+SS S Sbjct: 300 DSLNEMLNHVEGLLQKLELPYHILRLCGGDMSFTSAICYDFETWSAAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RYR + K ++ HTLNGS +A+ R + I+EN +G + +P VL PY Sbjct: 360 ESYQANRLKCRYRHSDDKKIELCHTLNGSALALPRIVATIIENNQMPEG-IRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|258647930|ref|ZP_05735399.1| serine--tRNA ligase [Prevotella tannerae ATCC 51259] gi|260851769|gb|EEX71638.1| serine--tRNA ligase [Prevotella tannerae ATCC 51259] Length = 424 Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats. Identities = 163/428 (38%), Positives = 244/428 (57%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N E + L+K+H + E +L++D K + +++++ R + S Sbjct: 1 MLTIKQIIENKEAIVRGLEKKHFPNAKEAIEAVLAIDNKRKEAQAQLDELLNRIKTLSKH 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + K E S+LK + LE+ + +L+ IPNVP EEVP G Sbjct: 61 IGDLMKQGLKEEAEKTKGEVSSLKSKTQTLEETMKQAQEKRTELLYQIPNVPYEEVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 AN+NI+++ GK S H+E+ + L+DFD K+SGA F V G AHL+RA Sbjct: 121 DANDNIIVKEDGKMTSIPENPLPHWELAKKYNLIDFDLGVKISGAGFPVYIGQGAHLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P++V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKAGYTEIMPPIVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+E K+LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILEEKNLPIKNCAYTECFRREAGSYGKDVRGLNRLHEFSKIELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L Y ++ LC GD+ F++ YD EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYHILLLCGGDMSFTSSLCYDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR + K ++ HTLNGS +A+ R + A+LEN+ DG + IP L+PY Sbjct: 360 DTYQANRLQCRYRKQD-KKIELCHTLNGSALALPRIMAALLENFQTPDG-IRIPKALQPY 417 Query: 417 MNNLAVIK 424 M +IK Sbjct: 418 M-GCEIIK 424 >gi|150006127|ref|YP_001300871.1| seryl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|254883514|ref|ZP_05256224.1| seryl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294775307|ref|ZP_06740830.1| serine--tRNA ligase [Bacteroides vulgatus PC510] gi|319641697|ref|ZP_07996380.1| seryl-tRNA synthetase [Bacteroides sp. 3_1_40A] gi|149934551|gb|ABR41249.1| seryl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|254836307|gb|EET16616.1| seryl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294450884|gb|EFG19361.1| serine--tRNA ligase [Bacteroides vulgatus PC510] gi|317386671|gb|EFV67567.1| seryl-tRNA synthetase [Bacteroides sp. 3_1_40A] Length = 424 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 155/427 (36%), Positives = 230/427 (53%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N E + L+K+H + E +L+ ++K R +++ A NS S Sbjct: 1 MLTIKQITENTEEVIRGLEKKHFKDAKATIEQVLAFNDKRRSTQNQLDKNLAEVNSLSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG + K + +KE L+ E + + L+ IPNVP + VP G Sbjct: 61 IGQLMKEGKKEDAETAKARVAEIKETSKALQAEMDKAQEDMTNLLYTIPNVPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 SA +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 SAEDNVVEKMGGMETELPKNALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D GY E+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARASGYEEIMPPTVVNTASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +LK+L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLKKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRSAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVI 423 +I Sbjct: 418 C-GFEMI 423 >gi|225550730|ref|ZP_03771679.1| serine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379884|gb|EEH02246.1| serine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 418 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 174/418 (41%), Positives = 254/418 (60%), Gaps = 4/418 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI IR++ + + + + I LD R L+++ +++ A++N S +IG Sbjct: 1 MFDINLIRKDIVVTKEKMLNKKVSSDLFDQIFGLDVLVRNLMQQEQNLNAKKNQLSKEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+ + + +++K +L + L KL+ IPN+ + VPIG Sbjct: 61 IL-AKNKDPKLQQTLDLVNSIKSELQDISLTLSNKQDELNKLLLVIPNMSDDSVPIGNDE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+ V + H+++ L+DFD++TK++G+RF + T A L RAL Sbjct: 120 NDNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLYRALQ 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 QF +D++ + G+ E+ AP++V E++ G+G +PKFADD+F +L PT+EV LTN Sbjct: 180 QFCLDMNV-KAGFNEIWAPVIVNQESLIGSGNLPKFADDLFKLENSNYYLSPTAEVQLTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ +EI+++ LPL +T L P FRSEAGSAGRD RG++RQHQF K ELV + + EDSF E Sbjct: 239 LHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKE 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE IL+ L+L YR ++LCTGDLGFS+ KTYDLEVWL N Y+EISSCS C N Sbjct: 299 LESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTN 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR RY++ + HTLNGS +A+ R A++ENY DGS+TIP L Y Sbjct: 359 FQARRAKIRYKETVDAPTELVHTLNGSSLAIDRLWAAVVENYQQEDGSITIPKALEKY 416 >gi|315657755|ref|ZP_07910635.1| serine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491552|gb|EFU81163.1| serine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 443 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 151/430 (35%), Positives = 239/430 (55%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ ++ NPE + + R +P + L+ DE+ R + E RA + + S QIG Sbjct: 15 MIDLRAMKDNPEPMRASQLARGNDPATVDQALAADERRRAALTAFETARAEQKAFSKQIG 74 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E + L + L E + LE+ ++ KK + N+ L+ VP G Sbjct: 75 SASKEERPA----LLEQAKKLSENVKALEEASNQAAEEAKKAAMVLENLILDGVPSGGED 130 Query: 120 NENILIR---SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +L + + + ++H ++G L +D DR K+SGARF L G A LE Sbjct: 131 DYEVLSQEGAPIRDFTAEGFTPQDHLDLGIGLDAIDTDRGAKVSGARFYYLKGVGARLEL 190 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 A+ +D HG+T + P +V E M GTG + + +D+++ D +L TSEV+ Sbjct: 191 AILNAALDTAI-AHGFTPMITPCMVSPETMSGTGFLGEHSDEIYYLPADNLYLTGTSEVA 249 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L +++EII+ + P R+T + FR EAGS G+DTRG++R HQF K E+ S + ED+ Sbjct: 250 LAGYHTNEIIDLSAGPKRYTGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCKLEDA 309 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++L+ E+L +++L YR+++ GDLG SA + +D E WL QN + E++S S Sbjct: 310 VEEHQKLLNMEREMLAKVELPYRIINTAAGDLGSSAAQKFDCEAWLPTQNRFMEVTSTSN 369 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+ RYRD K + TLNG+ + R ++AILEN+ ADGSV +P LRP Sbjct: 370 CTTFQARRLQIRYRDAEGK-PQVCATLNGT-LGTTRWIVAILENHQQADGSVRVPAGLRP 427 Query: 416 YMNNLAVIKK 425 Y+ L V++ Sbjct: 428 YLGGLEVLEP 437 >gi|307354815|ref|YP_003895866.1| seryl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] gi|307158048|gb|ADN37428.1| seryl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] Length = 425 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 161/428 (37%), Positives = 237/428 (55%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML++++IR +P+ + LKKR + + +L+ DE++R + +I +R RRN S + Sbjct: 1 MLELKFIRSSPDVVRADLKKRGDAEKLAWVDDLLAKDERSREMQVEINSMRNRRNIISRE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I Q G + L E +L ++ E E E+ +K +PN+ E VP+G Sbjct: 61 INQTRKAGG--EISGLLEEAKSLPSKIKDAETELAEIQEKIKFYQMRVPNILHESVPVGA 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ + G+ + H E+ GL +F+RA K+SGA F +L G LA ++ A Sbjct: 119 DDSENVEVSRWGEPTVPSFEVKNHGELAIEKGLAEFERAAKISGAGFYILKGRLALMDLA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L + IDL +E GYT V P ++ A G + F + M+ + +LI TSE + Sbjct: 179 LQRLAIDL-LAERGYTPVMPPYMMNRAAYEGVTDLSDFENVMYKIDGEDEFLIATSEHPM 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +Y EI E K LPLR ++ FR E GS G DT+G+ R HQF K E ++EDS+ Sbjct: 238 AAMYMDEIFEEKDLPLRLAGISTCFRREIGSHGLDTKGLFRVHQFNKVEQFIYCKQEDSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE +L AE+I + L L Y VV++CTGD+G A K YD+EVW+ + YRE+ SCS C Sbjct: 298 RLHEELLKNAEDIFRMLKLPYHVVNICTGDIGTVAAKKYDIEVWMPREETYREVVSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +Q+ R+N + RDP+ + + HTLN + VA R L AILEN DG+V IP LRP Sbjct: 358 TAYQAVRLNIKVRDPHEFEKKDYVHTLNSTAVATTRTLRAILENCQEEDGTVVIPEALRP 417 Query: 416 YMNNLAVI 423 YMN + Sbjct: 418 YMNGAETL 425 >gi|157736606|ref|YP_001489289.1| seryl-tRNA synthetase [Arcobacter butzleri RM4018] gi|166987309|sp|A8ERP6|SYS_ARCB4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|157698460|gb|ABV66620.1| seryl-tRNA synthetase [Arcobacter butzleri RM4018] Length = 412 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 179/419 (42%), Positives = 263/419 (62%), Gaps = 9/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ ++++ +++ AL+K+ ++ + L K + +++ED+ A +N S + G Sbjct: 1 MIDIKLLQKDFDYVVKALQKKGVDNALLNNLKDLALKTKQKRQEMEDVTAEQNLLSKEFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + L+ + + LK + LE E + L +I +PN+P E VP G Sbjct: 61 RYKKENL--DISELQEKINALKTKKQELEDEVRTLEDDLNSIILSVPNMPDENVPFGVDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+++ +G+KP+ +EH+++ +DF+R KL+ +RF+ + G A LERAL Sbjct: 119 NENVILEVIGEKPTFNFTPKEHWDLS--CDWLDFERGVKLAKSRFTAIKGDGARLERALI 176 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +M+D + + G+ E P + + GTGQ+PKFADD+F + +LIPT+EVSLTN Sbjct: 177 NYMLDFN-RQRGFNEWYVPFMANSNTLQGTGQLPKFADDLFKIEGEDLYLIPTAEVSLTN 235 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY+ EII+ LPL T+ P FR EAGSAGRDTRG++RQHQF K E+V+IT +E S Sbjct: 236 LYNDEIIDKSELPLLLTSYTPCFRKEAGSAGRDTRGLIRQHQFDKVEMVAITSQEQSDEI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M++CA ++L L L ++ V LC+GDLGFSA T DLEVWL GQN +REISS S + Sbjct: 296 FEKMVNCASDLLSSLGLCHQKVQLCSGDLGFSAAVTIDLEVWLPGQNKFREISSISNTRD 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY+ K HTLNGS +AVGR L+AI+ENY ADGSV IP VL+ Y+ Sbjct: 356 FQARRAKIRYK--EDKKNILAHTLNGSSLAVGRTLLAIMENYQQADGSVKIPEVLKKYL 412 >gi|333030166|ref|ZP_08458227.1| seryl-tRNA synthetase [Bacteroides coprosuis DSM 18011] gi|332740763|gb|EGJ71245.1| seryl-tRNA synthetase [Bacteroides coprosuis DSM 18011] Length = 424 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 151/427 (35%), Positives = 242/427 (56%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I ++ E + + L+K++ + E ++ ++ K + ++++ A S S + Sbjct: 1 MLTIKQITEDTEKVILGLEKKNFKNPKEALEKVIEVNNKRKDAQTQLDNNLAEVKSLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG ++N+ +++K+ LE E ++ L +L+S IPNVP E VP G Sbjct: 61 IGQLMKEGKKEEATEIRNKVASMKDGNKALEDEMNDATRELNELLSNIPNVPHESVPEGN 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 SA +N + R GK P + H+E+ + L+DF+ K++GA F V G A L+RA Sbjct: 121 SAEDNKVERMGGKNPDLPADAIPHWELAKKYDLIDFELGVKITGAGFPVYKGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L F +D + GY E+ P +V + +GTGQ+P M+ T D +LIPT+EV + Sbjct: 181 LINFFLDE-ARDAGYLEIEPPYVVNAASGFGTGQLPDKEGQMYHATADDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+ K LP++ + FR EAGS G+D RG+ R HQF K E+V I E S+ Sbjct: 240 TNIYRDVILNEKELPIKNCAYSACFRREAGSYGKDVRGLNRLHQFNKVEIVRIDTPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + M++ E ++ +L L YR++ LC GD+ F++ T+D EV+ A Q + E+SS S Sbjct: 300 ESLKEMIAHVEGLVNKLGLPYRILRLCGGDMSFTSAITFDFEVYSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RYR ++K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 ESYQANRLMCRYR-SDNKKTELCHTLNGSALALPRIVAALLENNQTPEG-IKIPEALVPY 417 Query: 417 MNNLAVI 423 +I Sbjct: 418 C-GFDII 423 >gi|254456443|ref|ZP_05069872.1| seryl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207083445|gb|EDZ60871.1| seryl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 419 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 270/428 (63%), Gaps = 17/428 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M +++ IR + +LK R E + LDE+NR LI+K E + + S Sbjct: 1 MHNLKDIRNDFSAFAKSLKNRSANIDFENLQKLDEENRNLIQKKESLEKEKKDISK---- 56 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 S +++ ++ + +L + + + + L K++S IPN+P +VP G N Sbjct: 57 -------SKDESMFAKSKEISVELGKVTENQKNIKIELDKILSNIPNIPHTDVPEGNDEN 109 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G+ P + H+E+GEAL ++DFD ATK +G+RF + LA LERAL Sbjct: 110 DNVEISKSGEIPIFDFKPKSHYELGEALNMLDFDLATKTTGSRFVFVKDKLALLERALSN 169 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-----WLIPTSEVS 235 FM+D H + + Y E+S PL+ D M+GTGQ+PKF +D F + +LIPT+EV Sbjct: 170 FMLDTHININEYQEISPPLIASDNTMFGTGQLPKFENDQFEIKFDQGSDRKFLIPTAEVI 229 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTN+ +II+ K+LP+RF P FR EAGS G+DT+GM+RQHQF+K ELVSI +E+ Sbjct: 230 LTNIVKDKIIDKKNLPMRFVASTPCFRKEAGSYGKDTKGMIRQHQFYKVELVSIVEKENC 289 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 E ERM CA +IL +L L Y+ + LC+GD+GFSA KTYD+EVWL +N YREISSCS+ Sbjct: 290 LKELERMTDCATDILDKLKLPYKKIILCSGDMGFSAEKTYDIEVWLPSENKYREISSCSS 349 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ++RM +RY++ N K F TLNGSG+AVGR LIA+LENY DGS+ +P VLRP Sbjct: 350 CSTFQAQRMKTRYKNEN-KETMFVGTLNGSGLAVGRTLIAVLENYQQKDGSIIVPEVLRP 408 Query: 416 YMNNLAVI 423 YMNNL +I Sbjct: 409 YMNNLEII 416 >gi|311748720|ref|ZP_07722505.1| serine--tRNA ligase [Algoriphagus sp. PR1] gi|126577252|gb|EAZ81500.1| serine--tRNA ligase [Algoriphagus sp. PR1] Length = 423 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 161/427 (37%), Positives = 239/427 (55%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML + IR N + L+KR+ + +L D+ + + + ++A NS S + Sbjct: 1 MLLVNQIRDNYAGVLAGLQKRNFQNAKEVLAEVLKWDDLRKSTQTQRDQMQAESNSISKK 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + +K T+ +K Q+ LE+E SLK L+ IPNVP VP G Sbjct: 61 IGMLMKEGKAAEAMEIKERTAQIKAQIKELEEENSNAEESLKSLLYTIPNVPHSSVPAGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +A +N ++ VG+ P + H+E+ + ++DFD K++GA F V G A L+RA Sbjct: 121 AAEDNEVVLEVGEVPVLHEGKKPHWELIKDYDIIDFDLGVKITGAGFPVYKGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D GYTEV P+LV +++ YGTGQ+P M+ + D +LIPT+EV L Sbjct: 181 LINFFLDE-AMAQGYTEVQPPILVNEDSGYGTGQLPDKEGQMYFASADNLYLIPTAEVPL 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY I+ LP++ P FR EAGS G RG+ R HQF K E+V IT + S+ Sbjct: 240 TNLYRDVILTEADLPVKNVGFTPCFRREAGSWGAHVRGLNRLHQFDKVEIVQITHPDKSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E M S + +LK+L+L YRV+ LC GD+GF++ TYD+EV+ A Q + E+SS S Sbjct: 300 ETLESMSSYVQGLLKKLELPYRVLRLCGGDMGFTSALTYDMEVYSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +QS R+ R++ + K + H+LNGS +A+ R + +ILEN DG + +P VL PY Sbjct: 360 ETYQSNRLKLRFKGED-KKTQLAHSLNGSALALPRIVASILENNQTPDG-INMPKVLHPY 417 Query: 417 MNNLAVI 423 + I Sbjct: 418 L-GFDKI 423 >gi|295103704|emb|CBL01248.1| seryl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3] Length = 443 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 135/445 (30%), Positives = 230/445 (51%), Gaps = 17/445 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NP+ + +KK+ + P + ++ D K R +K++E ++A RN S Sbjct: 1 MLDIKFVRENPDAVKENIKKKFQDAKLPLVDEVIEKDAKYRAALKEVEALKAARNKLSKA 60 Query: 58 ----IGQAIAEGNLSLVDALKNE-------TSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 GQ + + L+ + +++ LEKEE E+ + +++++ IP Sbjct: 61 NGPLFGQLKKCTDEAQKAELQAQIDANNAAVKADADKMAELEKEEEELSARIQEIMYSIP 120 Query: 107 NVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 + VPIG N+ + G+ H EI E+ +D D A +++G F Sbjct: 121 QMIDPSVPIGPDDTYNVEAQRFGEPVVPDFPIPYHTEIMESFDGIDMDAAGRVAGNGFYY 180 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DG 225 L G++A L A+ + D G+T V P ++ + G P+ M+ + Sbjct: 181 LLGNIARLHEAVLAYARDFMI-NKGFTYVIPPFMMHGNVVQGVMSFPEMDAMMYKIEGED 239 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LI TSE ++ + + ++ +PL T+ +P FR E G+ G + RG+ R HQF K E Sbjct: 240 LYLIGTSEHTMIGRFIDQTLDESKMPLTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQE 299 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 ++ + R E+S +E++ + E+ + +++ R ++ C+GDL K+ D+E W Q Sbjct: 300 MIVVCRPEESADWYEKLWKMSVELFRSMEIPVRQLNCCSGDLADLKVKSCDIEAWSPRQQ 359 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 Y E+ SCS G+ Q+RR++ R + + K HTLN + VA R LIA LEN+L ADG Sbjct: 360 KYFEVCSCSNLGDAQARRLHIRIKGKDGK-TYLAHTLNNTCVAPPRMLIAFLENHLQADG 418 Query: 406 SVTIPTVLRPYMNNLAVIKKEHILE 430 SVTIP VL+PYM L V+ + + Sbjct: 419 SVTIPEVLQPYMGGLKVMVPTNKKD 443 >gi|255693386|ref|ZP_05417061.1| serine--tRNA ligase [Bacteroides finegoldii DSM 17565] gi|260620864|gb|EEX43735.1| serine--tRNA ligase [Bacteroides finegoldii DSM 17565] Length = 424 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 151/422 (35%), Positives = 234/422 (55%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N E + L+K+ + + + +++L++K R +++ A NS S Sbjct: 1 MLTIKQITENTEAVIRGLEKKHFKNAKETIDQVIALNDKRRTTQNQLDKNLAEVNSLSRT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG ++ + + LKE L+ + + ++ ++ IPNVP + VP G Sbjct: 61 IGQLMKEGKKEEAESARARVAELKEGNKELDAVMTQAATEMQNVLYTIPNVPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+E K LP+ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILEEKQLPIMNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR+ + K + HTLNGS +A+ R + A+LEN +G + IP VL PY Sbjct: 360 DTYQANRLKCRYRNAD-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKVLVPY 417 Query: 417 MN 418 Sbjct: 418 CG 419 >gi|282877888|ref|ZP_06286697.1| serine--tRNA ligase [Prevotella buccalis ATCC 35310] gi|281299889|gb|EFA92249.1| serine--tRNA ligase [Prevotella buccalis ATCC 35310] Length = 429 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 144/431 (33%), Positives = 239/431 (55%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H E +L++D+ R +K++ + + N + + Sbjct: 1 MLTLKLISEETERVIKGLEKKHFEGARETVNQVLAIDKLRRESQQKLDKNKQQANLLAKK 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + + L + +K + + LKE+ L++ + L L+ IPN+P E+VP G Sbjct: 61 IGGLMKDKKLDEANEVKAQVAKLKEEAKGLQQSMETAENDLTTLLYTIPNIPNEDVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N++++ G P + H+++ + L+DFD K++GA F + G +A +RA Sbjct: 121 DASDNVVVKEGGVIPELGEDALCHWDLCKKFNLIDFDLGVKITGAGFPLYIGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F ++ + GY EV P +V + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLEE-ARKSGYLEVQPPFVVNQASGYGTGQLPDKEGQMYHVQLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ EI++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 TNIFRDEILDEKDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ML E + K+L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 ESLNEMLEHVEGLCKKLELPYHILKLCGGDMSFTSSICYDFEVWSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RYR ++ HTLNGS +A+ R + +ILEN +G + +P VL PY Sbjct: 360 ESYQANRLKCRYRHAEDGKIELCHTLNGSALALPRIVASILENNQTPEG-IRVPKVLVPY 418 Query: 417 MNNLAVIKKEH 427 +I ++ Sbjct: 419 C-GFEMIDDQN 428 >gi|281422100|ref|ZP_06253099.1| serine--tRNA ligase [Prevotella copri DSM 18205] gi|281403889|gb|EFB34569.1| serine--tRNA ligase [Prevotella copri DSM 18205] Length = 430 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 143/422 (33%), Positives = 235/422 (55%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H E +L D+ R +K+++ + + N + Q Sbjct: 1 MLTLKLISEETERVVKGLEKKHFPNAREAVEKVLEYDKIRREAQQKLDNNKQQANQFAKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG ++ K + + LK LE+ + + + + IPN+P E+VP G Sbjct: 61 IGALMKEGKKEEAESAKAQVAMLKADAKALEEIMEKAQNDMTNQLLEIPNIPCEQVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++++ G+KP+ + H+++ + L+DFD K++GA F V G +A +RA Sbjct: 121 DAADNVVVKEGGEKPNLGEDALCHWDLLKKYNLVDFDLGVKITGAGFPVYIGKMARFQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY E+ P +V +++ GTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEIQPPYVVNEDSGRGTGQLPDKEGQMYHANLDNLFLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ I++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I + S+ Sbjct: 240 TNIFRDVILDEKDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPGHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ML E +LK+L+L Y ++ LC GD+ F++ YD E W A Q + E+SS S Sbjct: 300 ESLNEMLDHVEGLLKKLELPYHILRLCGGDMSFTSSICYDFETWSAAQGRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R++ RYR + K ++ HTLNGS +A+ R + ILEN +G + +P VL PY Sbjct: 360 ESYQANRLHCRYRHTDDKKIELCHTLNGSALALPRIVATILENNQTPEG-IRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|315635769|ref|ZP_07891032.1| serine--tRNA ligase [Arcobacter butzleri JV22] gi|315480066|gb|EFU70736.1| serine--tRNA ligase [Arcobacter butzleri JV22] Length = 412 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 264/419 (63%), Gaps = 9/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ ++++ +++ AL+K+ ++ + L K + +++ED+ A +N S + G Sbjct: 1 MIDIKLLQKDFDYVVKALQKKGVDNALLNNLKDLALKTKQKRQEMEDVTAEQNLLSKEFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + L+ + +TLK + LE E + L +I +PN+P E VP G Sbjct: 61 RYKKENL--DISELQEKINTLKTKKQELEDEVRTLEDDLNSIILSVPNMPDENVPFGVDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 NEN+++ +G+KP+ +EH+++ +DF+R KL+ +RF+ + G A LERAL Sbjct: 119 NENVILEVIGEKPTFNFTPKEHWDLS--CDWLDFERGVKLAKSRFTAIKGDGARLERALI 176 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +M+D + + G+ E P + + GTGQ+PKFADD+F + +LIPT+EVSLTN Sbjct: 177 NYMLDFN-RQRGFNEWYVPFMANSNTLQGTGQLPKFADDLFKIEGEDLYLIPTAEVSLTN 235 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY+ EII+ LPL T+ P FR EAGSAGRDTRG++RQHQF K E+V+IT +E S Sbjct: 236 LYNDEIIDKSELPLLLTSYTPCFRKEAGSAGRDTRGLIRQHQFDKVEMVAITSQEQSDEI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M++CA ++L L L ++ V LC+GDLGFSA T DLEVWL GQN +REISS S + Sbjct: 296 FEKMVNCASDLLSSLGLCHQKVQLCSGDLGFSAAVTIDLEVWLPGQNKFREISSISNTRD 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY+ K HTLNGS +AVGR L+AI+ENY ADGSV IP VL+ Y+ Sbjct: 356 FQARRAKIRYK--EDKKNILAHTLNGSSLAVGRTLLAIMENYQQADGSVKIPEVLKKYL 412 >gi|229495393|ref|ZP_04389128.1| seryl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] gi|229317836|gb|EEN83734.1| seryl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] Length = 423 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 148/427 (34%), Positives = 237/427 (55%), Gaps = 9/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I+ I++ PE + L +H + I LD + R + ++ + + QI Sbjct: 1 MLTIKVIKEQPEEVIARLGVKHFDARESVARITELDAQRRSAQQTMDASLQEQKQLAKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ + G+ + +AL+ + LKEQ E+ + + S+++L+ IPN+P E VP G Sbjct: 61 GEKMKSGDKAAGEALRAQVQKLKEQSSEAEESKKQAEESIRQLLLTIPNMPHESVPEGKG 120 Query: 119 ANENILIRSVGKKPS-AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N+ I++ G P + H+++ + L+DF+ K+SGA F V G A L+RA Sbjct: 121 AEDNVCIKTGGTMPQLSQDNKLPHWDLAKKYDLIDFELGVKISGAGFPVYKGRGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L + +D G+ EV P +V ++ YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LINYFLDKAI-AAGFQEVEPPYVVNGDSGYGTGQLPDKEGQMYFAPADNLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+E LP++ + FR EAGS G+D RG+ R HQF K E+V I E S+ Sbjct: 240 TNMYRDVILEESQLPIKNVAYSACFRREAGSYGKDVRGLNRLHQFNKVEIVCIDTPERSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + M+S + +++ L L +R++ LC GD+ F++ T+D EV+ A Q + E+SS S Sbjct: 300 ATLDSMVSYVQGLVEELGLPWRILRLCGGDISFTSALTFDFEVFSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RYR K+ + HTLNGS +A+ R + ILENY +G + +P VLRPY Sbjct: 360 ESYQANRLKCRYR--KDKATELCHTLNGSALALPRIVATILENYQTPEG-IIVPEVLRPY 416 Query: 417 MNNLAVI 423 +I Sbjct: 417 T-GFDII 422 >gi|296121107|ref|YP_003628885.1| seryl-tRNA synthetase [Planctomyces limnophilus DSM 3776] gi|296013447|gb|ADG66686.1| seryl-tRNA synthetase [Planctomyces limnophilus DSM 3776] Length = 452 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 148/431 (34%), Positives = 234/431 (54%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+Q+I N E + R++ +L L +K LI++ + R + SA I + Sbjct: 24 MLDLQFICDNLELITKNCADRNVTIDLSRLLELRDKRIELIQQADQTRHAQKELSAAIPK 83 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + L E TL+E++ E ++ EV ++L+++ + +PN+ + P+G Sbjct: 84 V---ADPAEKQKLVAEGRTLREKIATFETQQQEVEAALREIQAQVPNLTHPDAPVGPDET 140 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + +IR+ G + R+H E+ E L+DF TK++G F L LE AL Q Sbjct: 141 FSKVIRTWGTPKAFDFKVRDHVELAEICDLIDFQAGTKVAGHGFYFLKNEAVLLELALVQ 200 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--GRWLIPTSEVSLTN 238 F I G+T P L R E + GTG P+ + + + L+ T+E+ L Sbjct: 201 FAIQ-KLVAKGFTPYVTPDLARHEVLEGTGYNPRGNETQIYSINGTDLSLVATAEIPLGG 259 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE--DSF 296 EI++ + LP+R L+ FR+EAG+ GR +RG+ R HQF K E+ + T + S Sbjct: 260 SLKDEILDIEQLPIRMAGLSHCFRTEAGAHGRASRGIYRVHQFTKVEMFAFTAPDLAASN 319 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE +++ EE+ ++L + Y+V+ C+GDLG A + YDLE W+ G+N + E++S S C Sbjct: 320 AMHEEIVAIEEEVFQQLGIPYQVLDTCSGDLGAPAYRKYDLEAWMPGRNTFGEVTSASNC 379 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQSRR+ R R P K + HTLNG+ VA+ R LIA+LENY ADG + IP +LRP+ Sbjct: 380 TDFQSRRLGIRCRLPEKKGTQHVHTLNGTCVAISRALIAVLENYQLADGGIEIPEILRPW 439 Query: 417 MNNLAVIKKEH 427 + A I+ H Sbjct: 440 V-GKARIEPRH 449 >gi|283955138|ref|ZP_06372640.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] gi|283793351|gb|EFC32118.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] Length = 411 Score = 355 bits (912), Expect = 6e-96, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 257/419 (61%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + LK + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFGSLKKEKTALEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + LK + S K ++ + + + + L+++ IPN+P E VP+G Sbjct: 61 TA------EDKENLKIKLSENKIKINEQNTKVNALENELEEIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ ++ V PS +EHFE+GE+L +DF R K+S +RF VL A L RAL Sbjct: 115 DENVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + G+ V+ P LV M+GTGQ+PKF +DM+ D +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFDFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S+ LP++ T + FR EAGSAGRDTRG++RQHQF K ELVSIT+ E S + Sbjct: 234 LYSGEILASEILPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSV 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN YREISS S C + Sbjct: 294 FNEMLECASDLLSSLGLSHRHLMLCTGDLGFSATKTVDLEVWLPGQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP VLR Y Sbjct: 354 FQARRAKIRYKNKQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGKIRIPDVLRKYF 411 >gi|329927026|ref|ZP_08281413.1| serine--tRNA ligase [Paenibacillus sp. HGF5] gi|328938737|gb|EGG35114.1| serine--tRNA ligase [Paenibacillus sp. HGF5] Length = 437 Score = 355 bits (912), Expect = 6e-96, Method: Composition-based stats. Identities = 159/430 (36%), Positives = 235/430 (54%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQ---NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++WIR+ + E L ++ + ++ LD++ R L+ +E +R +RN+ S + Sbjct: 1 MLDMKWIRESADHQEELQQVADRKGIALSVAELVKLDDQRRTLLLAVEALRQKRNAISQE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + +G + K + T+ E+L E EV + +L+ +PN+ + P+G Sbjct: 61 ISDLVRQGKPDEAERQKQQVKTINEELGQQEALYREVDEAYNELLILVPNIVSPDTPVGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ IR VG+ P + R+H +GE ++D R K +G R LTG A L RA Sbjct: 121 SDEDNVEIRRVGELPVFDYQFRDHVTLGELHRMIDIPRGVKTAGTRSYYLTGIGAMLHRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 + Q +D G+T + PL VR EAM T P D F T +WL+ TSEV L Sbjct: 181 VQQLAVD-MLVAKGFTLMDVPLTVRTEAMQHTAFFPLGQDQAFQITEQDKWLVGTSEVPL 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--ED 294 + YS E+++ P+R + FRSE GS GRD G+ R HQF K E V + E Sbjct: 240 VSFYSGEVVDVAE-PIRLAAASLCFRSEVGSGGRDVHGLYRVHQFAKVEQVVLCEASTEA 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S + + + AEE+L++L+L YRVV++CTGD+ K YD+E W+ + Y E S S Sbjct: 299 SELLLQEITANAEELLQKLELPYRVVAVCTGDMSQKTYKQYDIETWMPSRGAYGETHSSS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR N RYRD K L++ HTLN + VA R LI +LEN+ DGS+ IP LR Sbjct: 359 NLLDFQARRSNIRYRDAKGK-LRYCHTLNNTAVASPRILIPLLENHQQPDGSILIPKALR 417 Query: 415 PYMNNLAVIK 424 PYMN + I+ Sbjct: 418 PYMNGMERIE 427 >gi|325105142|ref|YP_004274796.1| seryl-tRNA synthetase [Pedobacter saltans DSM 12145] gi|324973990|gb|ADY52974.1| seryl-tRNA synthetase [Pedobacter saltans DSM 12145] Length = 423 Score = 355 bits (912), Expect = 6e-96, Method: Composition-based stats. Identities = 154/427 (36%), Positives = 238/427 (55%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + +IR+N H+ L R+ + I+++DEK R + + ++A N+ + +I Sbjct: 1 MLQVSYIRENRAHVLERLSVRNFGQPELVDEIIAIDEKRRSTQSQGDALQAEANAAAKKI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ + G +A+K +TS KE + L E + L I +PN+P VP G S Sbjct: 61 GELMKAGQREEAEAIKAKTSATKEDIKKLNDELAALEQELYNKIVQLPNLPHASVPKGIS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N ++ + G+ P+ ++ H+++ L+DF+ TK++GA F V G A L+RAL Sbjct: 121 AEDNEIVLTYGEAPNLPENAQAHWDLAAKYDLIDFELGTKITGAGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 F + + GY E+ P LV + + +GTGQ+P M+ D +LIPT+EV +T Sbjct: 181 INFFLAE-ADKAGYEEMMLPHLVNEASGFGTGQLPDKEGQMYFVGLDNLYLIPTAEVPIT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY I++ LP++ P FR EAGS G RG+ R HQF K E+V + S+ Sbjct: 240 NLYRDVILKEDQLPVKNCGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVQVVHPSQSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E+M + +L++L LHYRV+ LC GD+GF++ TYD+EVW A Q + E+SS S Sbjct: 300 VLEQMSLHVQGLLQKLGLHYRVLRLCGGDMGFTSALTYDMEVWSAAQQRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +QS R+ R++ K + HTLNGS +A+ R + +ILENY DG + IP VL PY Sbjct: 360 TYQSNRLKLRFKASEGK-PQLAHTLNGSALALPRIVASILENYQTEDG-IKIPEVLIPYT 417 Query: 418 NNLAVIK 424 +I+ Sbjct: 418 -GFDMIR 423 >gi|239980871|ref|ZP_04703395.1| seryl-tRNA synthetase [Streptomyces albus J1074] Length = 410 Score = 355 bits (912), Expect = 6e-96, Method: Composition-based stats. Identities = 146/416 (35%), Positives = 228/416 (54%), Gaps = 11/416 (2%) Query: 15 DIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 + + R + + +LS DE+ R + +++R+ + S I +A + L Sbjct: 2 RASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSLGKLIPKATGDEKTE----L 57 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI--LIRSVGKK 131 + L + + E+ E K+L+ + N+ +VP+G + + ++ Sbjct: 58 LKKAGELSAAVKAADAEKDEADQEAKQLLLRLGNLVHPDVPVGGEEDFAVLAKHGTIRDF 117 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + R+H E+GEALG +D +RA K+SG+RF LTG A LE AL I + G Sbjct: 118 AAEGFEPRDHLELGEALGAIDVERAAKVSGSRFYYLTGVGALLELALVNAAIAQ-ATAAG 176 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEIIESKSL 250 +T + P LVR AM GTG + + A+D++ D +L+ TSEV L + EIIE+ L Sbjct: 177 FTPMLTPALVRPRAMEGTGFLGQAAEDVYHLEKDDFYLVGTSEVPLAAYHMDEIIEADKL 236 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 PLR+ +P FR EAG+ G+DTRG+ R HQF K E+ S ED+ EH+R+L + L Sbjct: 237 PLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVEPEDAEAEHQRLLDWEIQWL 296 Query: 311 KRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD 370 + L+L ++V+ + + DLG SA + +D E W+ Q YRE++S S C FQ+RR++ R R Sbjct: 297 QSLELPFQVIDVASADLGSSASRKFDCEAWIPTQGKYRELTSTSNCTEFQARRLSVRMR- 355 Query: 371 PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 K ++ TLNG+ AV R ++AILEN+ ADGSV +P VLRPY+ + + Sbjct: 356 -EGKKVQPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPYLGGRETLDPQ 410 >gi|83319858|ref|YP_424781.1| seryl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123535469|sp|Q2SR32|SYS_MYCCT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|83283744|gb|ABC01676.1| seryl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 422 Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats. Identities = 188/427 (44%), Positives = 272/427 (63%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH---LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +I QN + + L KR+ +Y++S + K + ++ K E +++R+N S + Sbjct: 1 MLDINYIEQNLDEVIQRLNKRNQQDYSDDLKYVVSKNLKRKEILVKSEALKSRKNQLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + E + + K E L EQ+ L++E V + + + IPN+P +++ G Sbjct: 61 IGTLLKEKKVDQSEQAKIEVINLNEQIIKLDEELRVVNDQILEKLLYIPNLPHKDIYFGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ IR + + S H++I LGL+DF++ KLSG RF + TG + L R+ Sbjct: 121 SDEDNVEIRKSNHS-NLLKHSTPHWQIATKLGLVDFEKGVKLSGTRFLIYTGLGSKLVRS 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 + ++ H +HGY E+ PL+V AM GTGQ+PKF++DM+ ++LIPTSEV LT Sbjct: 180 IADLLLKRH-EKHGYKEIFCPLIVNKSAMLGTGQLPKFSEDMYQV-GEQYLIPTSEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+++EI+ LPL++T+ FR EAGSAGRDT+GM+R HQF K ELV I E+S Sbjct: 238 NLHANEILAYDVLPLKYTSFTQCFRQEAGSAGRDTKGMIRLHQFNKVELVKIVHPEESMN 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E ++ AE++L DL YRVV LC+GD+GFS+ KTYDLEVW QN YREISSCS C Sbjct: 298 ELEMLIKDAEDVLNMFDLPYRVVELCSGDIGFSSAKTYDLEVWFPEQNKYREISSCSNCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+R M +R++D +SK +K HTLNGSGVAV R + AILENY + + + +PT+LRPY Sbjct: 358 DFQARNMQTRFKDKDSK-IKLVHTLNGSGVAVDRLIAAILENYWDGEKLI-LPTLLRPYF 415 Query: 418 NNLAVIK 424 +N IK Sbjct: 416 DNQEFIK 422 >gi|261409855|ref|YP_003246096.1| seryl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261286318|gb|ACX68289.1| seryl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 433 Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats. Identities = 159/430 (36%), Positives = 234/430 (54%), Gaps = 9/430 (2%) Query: 1 MLDIQWIRQ---NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++WIR+ + E L ++ + ++ LD++ R L+ +E +R +RN+ S + Sbjct: 1 MLDMKWIRESTDHQEELQQVADRKGIALSVAELVRLDDQRRTLLLAVEALRQQRNAISQE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + +G + K + T+ E+L E EV + +L+ +PN+ + P+G Sbjct: 61 ISALVRQGKPDEAERQKQQVKTINEELDQQETLYREVNEAYNELLILVPNIVSPDTPVGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ IR VG+ P + R+H +GE ++D R K +G R LTG A L RA Sbjct: 121 SDEDNVEIRRVGELPVFDYEFRDHVTLGELHRMVDIPRGVKTAGTRSYYLTGIGAMLHRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 + Q +D G+ + PL VR EAM T P D F T +WL+ TSEV L Sbjct: 181 VQQLAVD-MLVAKGFALMDVPLTVRTEAMQNTAFFPLGQDQAFQITEQDKWLVGTSEVPL 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--ED 294 + YS EI++ P+R + FRSE GS GRD G+ R HQF K E V + E Sbjct: 240 VSFYSGEIVDVAE-PIRLAAASLCFRSEVGSGGRDVHGLYRVHQFAKVEQVVLCEASTEA 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S + + + AEE+L++L+L YRVV++CTGD+ K YD+E W+ + Y E S S Sbjct: 299 SEQLLQEITANAEELLQKLELPYRVVAVCTGDMSQKTYKQYDIETWMPSRGAYGETHSSS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR N RYRD K L++ HTLN + VA R LI +LEN+ DGS+ IP LR Sbjct: 359 NLLDFQARRSNIRYRDAEGK-LRYCHTLNNTAVASPRILIPLLENHQQPDGSILIPKALR 417 Query: 415 PYMNNLAVIK 424 PYMN + I+ Sbjct: 418 PYMNGMERIE 427 >gi|256384387|gb|ACU78957.1| serine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385219|gb|ACU79788.1| serine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455663|gb|ADH21898.1| serine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 422 Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats. Identities = 186/427 (43%), Positives = 267/427 (62%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH---LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +I QN + + L KR+ +Y + + K + ++ K E +++R+N S + Sbjct: 1 MLDINYIEQNLDEVIQRLNKRNQQDYSEDLKYAVEKNFKRKEILVKSEALKSRKNQLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG I + + K E +L EQ+ L+ E V + + +S IPN+P +++ G Sbjct: 61 IGILIKDNKNKEAEKAKAEVVSLNEQIIKLDDELRIVNEQILEKLSYIPNLPHKDIYFGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ IR P H + H+EI LGL+DF++ KLSG+RF + TG + L RA Sbjct: 121 SDEDNVEIRKTKHNPLLTHST-PHWEIATKLGLVDFEKGVKLSGSRFLIYTGLGSKLVRA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 + ++ H +H Y E+ PL+V AM GTGQ+PKF++DM+ ++LIPTSEV LT Sbjct: 180 IADILLKRH-EKHNYKEIFCPLIVNKSAMLGTGQLPKFSEDMYQV-GEQYLIPTSEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+++EI+ LPL++T+ FR EAGSAGRDT+GM+R HQF K ELV I + S Sbjct: 238 NLHANEILTYDMLPLKYTSFTQCFRQEAGSAGRDTKGMIRLHQFNKVELVKIVHPDQSMN 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E ++ AE++L DL YRVV LC+GD+GFS+ KTYDLEVW QN YREISSCS C Sbjct: 298 ELELLVKDAEDVLNMFDLPYRVVELCSGDIGFSSAKTYDLEVWFPEQNKYREISSCSNCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+R + +R++D + K +K HTLNGSGVAV R + AILENY + + V +PT+LRPY Sbjct: 358 DFQARNIQTRFKDKDGK-IKLVHTLNGSGVAVDRLIAAILENYWDGEKLV-LPTILRPYF 415 Query: 418 NNLAVIK 424 + +K Sbjct: 416 DKKEFLK 422 >gi|255076447|ref|XP_002501898.1| seryl-tRNA synthetase [Micromonas sp. RCC299] gi|226517162|gb|ACO63156.1| seryl-tRNA synthetase [Micromonas sp. RCC299] Length = 512 Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats. Identities = 143/435 (32%), Positives = 225/435 (51%), Gaps = 11/435 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D + I++NP+ + KR ++S E+ + L ++ ++IR +RN+N+ + Sbjct: 81 IDFKRIKENPDAIQANADKRAAPCDVAKVVSTYERYQALNRECDEIREKRNANAKSM--- 137 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + AL E LK+QL +E + + + L+ IPN +VPIG Sbjct: 138 KGKMEADVRAALVEEGKALKDQLAAIEGDLNALEVELQIEGQKIPNDTHPDVPIGGEEMA 197 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 +L R VG K H +IGE LG+ DF +K+ G+RF LTG A LE AL + Sbjct: 198 -VLRREVGAKRDFSFEVANHVDIGERLGMFDFGTGSKVCGSRFVYLTGAGAMLELALINW 256 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 + G+ + P LVR M G P+ + + L T+E+ L + Sbjct: 257 AMQ-KVVSKGFKPMVVPDLVRQSTMEKCGFQPRAENTQVYNIESSELCLAGTAEILLGGV 315 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y E+++ K LP++ + FR+EAG+AG TRGM R HQF K E+ ++ E S H Sbjct: 316 YMDEVVDEKQLPIKMAAFSHCFRTEAGAAGASTRGMYRLHQFSKVEMFVVSTPEQSDELH 375 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + ++ EE+ + L H++V+ + + DLG A + +D+E W+ Y EISS S C ++ Sbjct: 376 DELIGIEEEMYRELGFHFKVLDMSSEDLGAPAYRKFDIEAWMPALERYGEISSASNCTDY 435 Query: 360 QSRRMNSRYRDP--NSKSLKF--THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 Q+RR+N +YR + K HTLN + AV R +I ILEN+ N DGSV +P L+P Sbjct: 436 QARRLNIKYRPNAVDGKKQPLAHCHTLNATACAVPRMIITILENFQNEDGSVNVPEPLQP 495 Query: 416 YMNNLAVIKKEHILE 430 +M L V+ E + E Sbjct: 496 FMGGLKVLTPEVVAE 510 >gi|288561203|ref|YP_003424689.1| seryl-tRNA synthetase SerS [Methanobrevibacter ruminantium M1] gi|288543913|gb|ADC47797.1| seryl-tRNA synthetase SerS [Methanobrevibacter ruminantium M1] Length = 425 Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats. Identities = 141/428 (32%), Positives = 228/428 (53%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R+NP+ + + KKR +E ++ D R ++ +RA +N S Sbjct: 1 MLDIKLFRENPDLIFDSEKKRFRSTENAEKVIEYDTLWREGESRLNSLRAEKNKLSKSFK 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA +GN ++ + ++ + E++ L + E + + N+ E+VP+ + Sbjct: 61 QAKKDGN---IEEVIAQSKAVAEEIKELGPKIEEYKQLREDYRYKVGNIIDEDVPVSDTE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+++R+VG+ P H ++ E + D + A ++GARF L + HL AL Sbjct: 118 DDNLIVRTVGELPDFDFEPLNHVDLIEKIDGADIETAASIAGARFYYLKRDILHLNLALI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 QF ++ E GY + P V+ E T ++ +F + ++ + +LI T+E +L Sbjct: 178 QFALNE-LEERGYIPLQTPFFVKGEVAAETSELGEFEETLYKVENEDLYLIATAEQTLAA 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EII + LP+R+ L+ FR EAGS G+DT G+ R HQF K E + E+S E Sbjct: 237 LHRDEIINPEDLPMRYCALSTCFRKEAGSHGKDTLGIFRVHQFEKIEQFIFSTPEESKNE 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L E+I K+L L Y++V++ + L +A YDLE W G YRE+ SC+ CG+ Sbjct: 297 HHRLLEVTEDIYKKLGLPYQIVAIVSSALNDNAAIKYDLEAWFPGSKTYRELVSCTNCGD 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+R+ +RY S + HTLN + +A R + ILENY DGSV +P VL PYM Sbjct: 357 YQARKTKTRYGRAGSGDAQTLHTLNSTAIATERTMCCILENYQQDDGSVKVPEVLVPYMG 416 Query: 419 NLAVIKKE 426 VI+ Sbjct: 417 GKTVIEAR 424 >gi|160944284|ref|ZP_02091513.1| hypothetical protein FAEPRAM212_01793 [Faecalibacterium prausnitzii M21/2] gi|158444466|gb|EDP21470.1| hypothetical protein FAEPRAM212_01793 [Faecalibacterium prausnitzii M21/2] Length = 443 Score = 355 bits (910), Expect = 9e-96, Method: Composition-based stats. Identities = 134/445 (30%), Positives = 227/445 (51%), Gaps = 17/445 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NP+ + +KK+ + P + ++ D K R +K++E ++A RN S Sbjct: 1 MLDIKFVRENPDAVKENIKKKFQDAKLPLVDEVIEKDAKYRAALKEVEALKAARNKLSKA 60 Query: 58 ----IGQAIAEGNLSLVDALKNETSTLKEQLP-------ILEKEEHEVCSSLKKLISCIP 106 GQ + + L+ + + LEKEE + + +++++ IP Sbjct: 61 NGPLFGQLKKCTDEAQKAELQAQIDANNAAVKADADKMAELEKEEEALSARIQEIMYSIP 120 Query: 107 NVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 + VPIG N+ + G+ H EI E+ +D D A +++G F Sbjct: 121 QMIDPSVPIGPDDTYNVEAQRFGEPVVPDFPIPYHTEIMESFDGIDMDAAGRVAGNGFYY 180 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DG 225 L G++A L A+ + D G+T V P ++ + G P+ M+ + Sbjct: 181 LLGNIARLHEAVLAYARDFMI-NKGFTYVIPPFMMHGNVVQGVMSFPEMDAMMYKIEGED 239 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LI TSE ++ + + ++ +PL T+ +P FR E G+ G + RG+ R HQF K E Sbjct: 240 LYLIGTSEHTMIGRFIDQTLDESKMPLTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQE 299 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 ++ + R E+S +E++ + E+ + +++ R ++ C+GDL K+ D+E W Q Sbjct: 300 MIVVCRPEESADWYEKLWQMSVELFRSMEIPVRQLNCCSGDLADLKVKSCDIEAWSPRQQ 359 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 Y E+ SCS G+ Q+RR++ R + + K HTLN + VA R LIA LEN+L ADG Sbjct: 360 KYFEVCSCSNLGDAQARRLHIRIKGKDGK-TYLAHTLNNTCVAPPRMLIAFLENHLQADG 418 Query: 406 SVTIPTVLRPYMNNLAVIKKEHILE 430 SVTIP VL+PYM L V+ + + Sbjct: 419 SVTIPEVLQPYMGGLKVMVPTNKKD 443 >gi|331703077|ref|YP_004399764.1| serine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801632|emb|CBW53785.1| Serine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 422 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 187/427 (43%), Positives = 268/427 (62%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH---LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +I QN + + L KR+ +Y + + K + ++ K E +++R+N S + Sbjct: 1 MLDINYIEQNLDEVIQRLNKRNQQDYSEDLKYAVEKNLKRKEILVKSEALKSRKNQLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG I + + K E +L EQ+ L+ E V + + +S IPN+P +++ G Sbjct: 61 IGILIKDNKNKEAEKAKAEVVSLNEQIIKLDDELRIVNEQILEKLSYIPNLPHKDIYFGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ IR P H + H+EI LGL+DF++ KLSG+RF + TG + L R Sbjct: 121 SDEDNVEIRKTKHSPLLTHST-PHWEIATKLGLVDFEKGVKLSGSRFLIYTGLGSKLVRV 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 + ++ H +H Y E+ PL+V AM GTGQ+PKF++DM+ ++LIPTSEV LT Sbjct: 180 IADILLKRH-EKHNYKEIFCPLIVNKSAMLGTGQLPKFSEDMYQV-GEQYLIPTSEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+++EI+ LPL++T+ FR EAGSAGRDT+GM+R HQF K ELV I + S Sbjct: 238 NLHANEILTYDMLPLKYTSFTQCFRQEAGSAGRDTKGMIRLHQFNKVELVKIVHPDQSMN 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E ++ AE++L DL YRVV LC+GD+GFS+ KTYDLEVW QN YREISSCS C Sbjct: 298 ELELLVKDAEDVLNMFDLPYRVVELCSGDIGFSSAKTYDLEVWFPEQNKYREISSCSNCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+R + +R++D +SK +K HTLNGSGVAV R + AILENY + + V +PT+LRPY Sbjct: 358 DFQARNIQTRFKDKDSK-IKLVHTLNGSGVAVDRLIAAILENYWDGEKLV-LPTILRPYF 415 Query: 418 NNLAVIK 424 +N +K Sbjct: 416 DNKEFLK 422 >gi|310287971|ref|YP_003939230.1| Seryl-tRNA synthetase [Bifidobacterium bifidum S17] gi|309251908|gb|ADO53656.1| Seryl-tRNA synthetase [Bifidobacterium bifidum S17] Length = 453 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 142/431 (32%), Positives = 236/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L DE R +K+ E+ RA++ +IG Sbjct: 26 MLDIQFIREHADIVKESQRKRGESVELVDEVLRSDETRRSALKEFEEARAQQ----KEIG 81 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A AL +T L ++ + + + NV E P G Sbjct: 82 KKVAAAPADEKAALIAQTKELSAKVAEYKAAADAAAEEYTTAMWKLSNVVEPEAPEGGED 141 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + ++H +G + +D R K+ G+RF L G +A ++ A Sbjct: 142 DYVVVKKVGQPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGAVARMQIA 201 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D +HG+ P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 202 MLTMAVD-QAEKHGFVLAITPTLVRPEVMAGTGFLNSHADEIYRLREPDEQYLVGTSEVA 260 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ + PLR+ + +R EAG+AG+DT G++R HQF K E+ T++EDS Sbjct: 261 LAGMHENEILDLSNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYTKQEDS 320 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EH+ +LS EE+L ++++ YRV+ GDLG SA + +D E W+ Q YRE++S S Sbjct: 321 YKEHQHLLSMEEEMLAKVEVPYRVIDTAAGDLGSSAARKFDTEAWIPTQGRYRELTSTSN 380 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R+ + S + TLNG+ +A R L+AILEN+ DGS+ IP +RP Sbjct: 381 CTEYQARRLNIRERNEDG-STRAVSTLNGT-LATTRWLVAILENHQQKDGSIEIPQAMRP 438 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 439 YMGGKEVIEPT 449 >gi|255007813|ref|ZP_05279939.1| seryl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313145518|ref|ZP_07807711.1| seryl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313134285|gb|EFR51645.1| seryl-tRNA synthetase [Bacteroides fragilis 3_1_12] Length = 424 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 149/427 (34%), Positives = 232/427 (54%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N + + L+K+ + ++ +++K R +++ A NS S Sbjct: 1 MLTIKQITENTDAVIRGLEKKHFKGAKETIAQVIEVNDKRRNTQNQLDKNLAEVNSLSKT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG +A K + +KE L+ + + + + L+ IPN+P + VP G Sbjct: 61 IGQLMKEGKKEEAEAAKTRVAEIKETNKTLQADMDQAANDMLNLLYTIPNIPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVEKMGGMETQLPTDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSR 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN+ +G + IP L PY Sbjct: 360 DTYQANRLKCRYR-SGEKKTELCHTLNGSALALPRIVAALLENHQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVI 423 +I Sbjct: 418 C-GFDII 423 >gi|153807618|ref|ZP_01960286.1| hypothetical protein BACCAC_01900 [Bacteroides caccae ATCC 43185] gi|149129980|gb|EDM21192.1| hypothetical protein BACCAC_01900 [Bacteroides caccae ATCC 43185] Length = 424 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 148/422 (35%), Positives = 229/422 (54%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N E + L+K+ + + E +++L++K R +++ A NS S Sbjct: 1 MLTIKQITENTEAVIRGLEKKHFKNAKETIEQVIALNDKRRSTQNQLDKNLAEVNSLSRT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG + + + LKE L+ + + ++ + IPN+P + VP G Sbjct: 61 IGQLMKEGKKEEAETARARVAELKEGNKELDATMTQAATDMQNALYTIPNIPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GY E+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYIEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYR-SGEKKTELCHTLNGSALALPRIVAALLENNQTPEG-IKIPKALVPY 417 Query: 417 MN 418 Sbjct: 418 CG 419 >gi|154150976|ref|YP_001404594.1| seryl-tRNA synthetase [Candidatus Methanoregula boonei 6A8] gi|166222741|sp|A7I890|SYS_METB6 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|153999528|gb|ABS55951.1| seryl-tRNA synthetase [Methanoregula boonei 6A8] Length = 425 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 157/428 (36%), Positives = 241/428 (56%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML+I+++R +P+ + L++R + + IL+ D ++R L + +++R RRN+ + + Sbjct: 1 MLEIRFVRASPDVVKADLERRGTPEKIAWVDEILAKDARSRELKVQTDELRRRRNTIARE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I +A G L E + L +++ + E+ E+ ++ + +PN+ E VP G Sbjct: 61 INEARKTGK--DAAPLLREAAELPQKIKANDAEQEEISGIIRTRLMRLPNILHESVPKGK 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 EN+ IR VG + + H ++ G DF+RA K SGA F L G L L+ A Sbjct: 119 DDTENVEIRRVGTPRTFDFELKNHGQLAADNGWADFERAAKTSGAGFYFLKGGLVMLDLA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L +F +DL + G+T V P +++ ++ G + F M+ D +LI TSE + Sbjct: 179 LQRFALDL-LGKKGFTPVIPPFMIKRDSYEGVTDLDDFEKVMYKIDGDDTYLIATSEHPI 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +Y EI E K LPLR L+P FR E G+ G DT+G+ R HQF K E R E+S+ Sbjct: 238 AAMYQDEIFEEKDLPLRLCGLSPCFRREIGAHGLDTKGLFRVHQFTKIEQFVFCRPENSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE +L+ AEE+ +L L Y VV++CTGD+G A K YD+E W+ +N Y+E+ SCS C Sbjct: 298 QIHEELLANAEEVFTKLGLPYHVVNICTGDIGTVAAKKYDIEAWMPRENAYKEVVSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+ +N R RD + ++ HTLN + +A R L ILENY N DGSVTIP VLR Sbjct: 358 TSYQAASLNIRVRDKENFETKHLVHTLNSTAIATSRALRCILENYQNRDGSVTIPDVLRQ 417 Query: 416 YMNNLAVI 423 YMN+ + Sbjct: 418 YMNDREFL 425 >gi|226499136|ref|NP_001140663.1| hypothetical protein LOC100272738 [Zea mays] gi|194700466|gb|ACF84317.1| unknown [Zea mays] Length = 458 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 137/442 (30%), Positives = 218/442 (49%), Gaps = 15/442 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R NPE + + + R + + +++LD+ R +++ IR N+ S Sbjct: 1 MLDINLFRTDKGGNPELIRESQRSRFASVELVDEVIALDKAWRERQFELDKIRQELNATS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ A L T +K++L E E E S+L ++ I N+ E VP+ Sbjct: 61 KKIGKLKASKQEEEAKKLMESTDEIKKRLAAKEVEVQEAKSTLDAKLTTIGNIVHESVPV 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N ++R+ G+K + H ++ L ++ ++ ++G R L L Sbjct: 121 SEDEANNKIVRTFGEKRV-EENLKNHVDLCRMLDIVALEKGADVAGGRGFYLKDEGVLLN 179 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 AL F + + G+ + P +R E M Q+ +F ++++ T + ++LI TS Sbjct: 180 LALINFGLAF-LRKRGFKPMQTPFFMRKETMAKCAQLAQFDEELYKVTGDGEDKYLIATS 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+++ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 239 EQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSP 298 Query: 293 ED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 D S+ HE ML +E+ K + L Y+VVS+ +G L +A K YDLE W +RE+ Sbjct: 299 NDNDSWEMHEEMLKNSEDYYKEIGLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTFREL 358 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C +FQSRR+ Y + + +S +F H LN + A R L ILEN+ DG V Sbjct: 359 VSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKEDG-VE 417 Query: 409 IPTVLRPYMNNLAVIKKEHILE 430 +P L+PYM + + + L+ Sbjct: 418 VPKALQPYMGGIEFLPFKQPLD 439 >gi|327540801|gb|EGF27366.1| seryl-tRNA synthetase [Rhodopirellula baltica WH47] Length = 426 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 137/423 (32%), Positives = 221/423 (52%), Gaps = 9/423 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I QN + + KR + + I L+ + +K+ E++ + N S QI Sbjct: 1 MLDRKFILQNAQLVAENSAKRGVSVDVDAICRLEAERMDALKQAEELNRQANEVSKQI-- 58 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + L + +L+EQ + + + + +L + +PN+ +VP G + Sbjct: 59 -KSAKDNDERQELIAKGRSLREQKDAAGAAQDRLEAEILELQTILPNMTHPDVPEGGEHD 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N + R P +H ++GE L DF+ +++G+ F L L+ AL Q Sbjct: 118 ANEIGRGKTPVPEMDFQPLDHLQLGEKHDLFDFEGGARVAGSGFYFLRNAAVRLDLALQQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 F I H + G+T VS P L + GTG P+ + L+ T+E+ L Sbjct: 178 FAIS-HLAGKGFTPVSTPDLALTSVLQGTGFNPRGPETQIYSIENTELNLVATAEIPLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + S +I+ S+ LPLR+ L+ FR+EAG+AGR ++G+ R HQF K E+ + T + S Sbjct: 237 MLSGQILASEELPLRYCGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFAFTLPDQSTAM 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCST 355 HE M EI L++ YRV+ TGDLG A + YDLE W+ G+ + E++S S Sbjct: 297 HEEMRELECEIFDALEVPYRVIDTATGDLGGPAYRKYDLEAWMPGRGESGDWGEVTSTSN 356 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++Q+RR+N R + K F HTLNG+ +A GR +IAILEN+ ADG++ +P +LRP Sbjct: 357 CTDYQARRLNVRSKSNTQKGTDFVHTLNGTAIATGRAMIAILENHQRADGTINVPEILRP 416 Query: 416 YMN 418 ++ Sbjct: 417 WVG 419 >gi|2947036|gb|AAC05434.1| seryl-tRNA synthase [Buchnera aphidicola] Length = 427 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 186/428 (43%), Positives = 259/428 (60%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+ +R + + L K+ + I SL++K + L K E+++ + N+ SA + Sbjct: 1 MLNPYLLRNQIDAISKKLLKKKFKLDISLISSLEKKRKKLQIKTENLQYKHNTLSALFKK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 L + LK + + L L+ E + + + IPN+P ++VP G S+ Sbjct: 61 EKK--IQELDENLKRTLTKSSKNLSELKIELNLLQEKIHNFSLSIPNIPSDDVPEGNSSE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +++ GKK R+H EIG L +D+ + K+SGARF V+ G++A L RAL Q Sbjct: 119 NNKIVKYWGKKREYSFAVRDHVEIGNKLNQLDWKSSAKISGARFIVMKGNIALLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSL 236 FM+DLHT +HGYTE P LV +++YGTGQ+PKF DD+F LIPT+EV L Sbjct: 179 FMLDLHTIKHGYTETYVPYLVNHDSLYGTGQLPKFTDDLFHINSIDKKKYVLIPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL+S++I+ LP+ T P FRSEA S GRD++G++R HQF K ELV I + E S Sbjct: 239 TNLFSNQILNETELPIMLTAHTPCFRSEASSYGRDSKGLIRLHQFDKVELVQIIQPELSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE++L+ L+L YR V LC G++GFSA KTYDLEVW Q YREISSCS Sbjct: 299 NALELLTHHAEKVLQLLELPYRKVLLCGGEMGFSATKTYDLEVWFPSQKKYREISSCSNM 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR-P 415 +FQ+RRM +RY+ KS F HTLNGSG+A+GR L AILENY ++DG VTIP +L+ Sbjct: 359 SDFQARRMKTRYKKKKEKSNSFVHTLNGSGLAIGRTLAAILENYQDSDGRVTIPKILQKK 418 Query: 416 YMNNLAVI 423 YM + I Sbjct: 419 YMQGIEYI 426 >gi|161579037|ref|NP_864198.2| seryl-tRNA synthetase [Rhodopirellula baltica SH 1] gi|46577192|sp|Q7UXX6|SYS_RHOBA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase Length = 426 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 137/423 (32%), Positives = 221/423 (52%), Gaps = 9/423 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I QN + + KR + + I L+ + +K+ E++ + N S QI Sbjct: 1 MLDRKFILQNAQLVAENSAKRGVSVDVDAICRLEAERMDALKQAEELNRQANEVSKQI-- 58 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + L + +L+EQ + + + + +L + +PN+ +VP G + Sbjct: 59 -KSAKDNDERQELIAKGRSLREQKDAAGAAQDRLEAEILELQTILPNMTHPDVPEGGEHD 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N + R P +H ++GE L DF+ +++G+ F L L+ AL Q Sbjct: 118 ANEIGRGKTPVPEMDFQPLDHLQLGEKHDLFDFEGGARVAGSGFYFLRNAAVRLDLALQQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 F I H + G+T VS P L + GTG P+ + L+ T+E+ L Sbjct: 178 FAIS-HLAGKGFTPVSTPDLALTSVLQGTGFNPRGPETQIYSIENTELNLVATAEIPLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + S +I+ S+ LPLR+ L+ FR+EAG+AGR ++G+ R HQF K E+ + T + S Sbjct: 237 MLSGQILASEELPLRYCGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFAFTLPDQSTAM 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCST 355 HE M EI L++ YRV+ TGDLG A + YDLE W+ G+ + E++S S Sbjct: 297 HEEMRELECEIFDALEVPYRVIDTATGDLGGPAYRKYDLEAWMPGRGESGDWGEVTSTSN 356 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++Q+RR+N R + K F HTLNG+ +A GR +IAILEN+ ADG++ +P +LRP Sbjct: 357 CTDYQARRLNVRSKSNTQKGTDFVHTLNGTAIATGRAMIAILENHQRADGTINVPEILRP 416 Query: 416 YMN 418 ++ Sbjct: 417 WVG 419 >gi|32396907|emb|CAD71875.1| seryl-tRNA synthetase [Rhodopirellula baltica SH 1] Length = 442 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 137/423 (32%), Positives = 221/423 (52%), Gaps = 9/423 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I QN + + KR + + I L+ + +K+ E++ + N S QI Sbjct: 17 MLDRKFILQNAQLVAENSAKRGVSVDVDAICRLEAERMDALKQAEELNRQANEVSKQI-- 74 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + L + +L+EQ + + + + +L + +PN+ +VP G + Sbjct: 75 -KSAKDNDERQELIAKGRSLREQKDAAGAAQDRLEAEILELQTILPNMTHPDVPEGGEHD 133 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N + R P +H ++GE L DF+ +++G+ F L L+ AL Q Sbjct: 134 ANEIGRGKTPVPEMDFQPLDHLQLGEKHDLFDFEGGARVAGSGFYFLRNAAVRLDLALQQ 193 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 F I H + G+T VS P L + GTG P+ + L+ T+E+ L Sbjct: 194 FAIS-HLAGKGFTPVSTPDLALTSVLQGTGFNPRGPETQIYSIENTELNLVATAEIPLGG 252 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + S +I+ S+ LPLR+ L+ FR+EAG+AGR ++G+ R HQF K E+ + T + S Sbjct: 253 MLSGQILASEELPLRYCGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFAFTLPDQSTAM 312 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCST 355 HE M EI L++ YRV+ TGDLG A + YDLE W+ G+ + E++S S Sbjct: 313 HEEMRELECEIFDALEVPYRVIDTATGDLGGPAYRKYDLEAWMPGRGESGDWGEVTSTSN 372 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++Q+RR+N R + K F HTLNG+ +A GR +IAILEN+ ADG++ +P +LRP Sbjct: 373 CTDYQARRLNVRSKSNTQKGTDFVHTLNGTAIATGRAMIAILENHQRADGTINVPEILRP 432 Query: 416 YMN 418 ++ Sbjct: 433 WVG 435 >gi|226303685|ref|YP_002763643.1| seryl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|226182800|dbj|BAH30904.1| seryl-tRNA synthetase [Rhodococcus erythropolis PR4] Length = 417 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 146/420 (34%), Positives = 235/420 (55%), Gaps = 10/420 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NPE + + + R +P + +L D R + +++RA + + ++G Sbjct: 1 MIDLKFLRENPEIVRESQRTRGEDPGLVDALLEADASRRAAVLTGDNLRAEQKAFGKKVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L + L ++ E +HE ++L I NV E P G Sbjct: 61 QASPEERPA----LLEGSKELAAKVKEAEAAQHEAQAALDAAHRAISNVVQEGAPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L VG+ P ++H E+GE+LGL+D +R K+SG+RF +TG + + Sbjct: 117 DYIVLEH-VGEIPKFDFEPKDHLELGESLGLIDMERGAKVSGSRFYFMTG-YGAMLQLGL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 + +G+T + P+LVR E M GTG + +D+++ D +L+ TSEV + Sbjct: 175 LQLAAQKAIANGFTMMIPPVLVRPEIMAGTGFLGAHSDEIYHLQDDDLYLVGTSEVPMAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI+E P R+ + FR EAGS G+DTRG++R HQF K E+ + R ED+ E Sbjct: 235 YHSGEILELNEGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCRPEDADAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L ++L +D+ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 295 HQRLLGWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQGTYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD N K + TLNG+ +A R +++ILEN+ ADGSV +P L P++ Sbjct: 355 FQARRLGVRYRDENGK-PQTAATLNGT-LATTRWIVSILENHQQADGSVRVPEALVPFVG 412 >gi|189467869|ref|ZP_03016654.1| hypothetical protein BACINT_04261 [Bacteroides intestinalis DSM 17393] gi|189436133|gb|EDV05118.1| hypothetical protein BACINT_04261 [Bacteroides intestinalis DSM 17393] Length = 424 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 150/427 (35%), Positives = 233/427 (54%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N + + L+K+ + + + +++ ++K R +++ + NS S Sbjct: 1 MLTIKQITENTDAVIRGLEKKHFKNAKETIDQVIAFNDKRRSTQSVLDNNLSEVNSISKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG + K+ + LKE L+ E + ++ L+ IPN+P +EVP G Sbjct: 61 IGQLMKEGKKEEAETAKSRVAELKETNKTLQAEMDQAAEDMQNLLYTIPNIPYDEVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVEKMGGMETELPKDALPHWELTKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GY E+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKAGYLEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+E K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILEEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHKEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYR-SGEKKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVI 423 +I Sbjct: 418 T-GFEMI 423 >gi|21672579|ref|NP_660646.1| seryl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|22654286|sp|P81434|SYS_BUCAP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|21623207|gb|AAM67857.1| seryl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 427 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 185/428 (43%), Positives = 259/428 (60%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+ +R + + L K+ + I SL++K + L K ++++ + N+ SA + Sbjct: 1 MLNPYLLRNQIDAISKKLLKKKFKLDISLISSLEKKRKKLQIKTDNLQYKHNTLSALFKK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 L + LK + + L L+ E + + + IPN+P ++VP G S+ Sbjct: 61 EKK--IQELDENLKRTLTKSSKNLSELKIELNLLQEKIHNFSLSIPNIPSDDVPEGNSSE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +++ GKK R+H EIG L +D+ + K+SGARF V+ G++A L RAL Q Sbjct: 119 NNKIVKYWGKKREYSFAVRDHVEIGNKLNQLDWKSSAKISGARFIVMKGNIALLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSL 236 FM+DLHT +HGYTE P LV +++YGTGQ+PKF DD+F LIPT+EV L Sbjct: 179 FMLDLHTIKHGYTETYVPYLVNHDSLYGTGQLPKFTDDLFHINSIDKKKYVLIPTAEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL+S++I+ LP+ T P FRSEA S GRD++G++R HQF K ELV I + E S Sbjct: 239 TNLFSNQILNETELPIMLTAHTPCFRSEASSYGRDSKGLIRLHQFDKVELVQIIQPELSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AE++L+ L+L YR V LC G++GFSA KTYDLEVW Q YREISSCS Sbjct: 299 NALELLTHHAEKVLQLLELPYRKVLLCGGEMGFSATKTYDLEVWFPSQKKYREISSCSNM 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR-P 415 +FQ+RRM +RY+ KS F HTLNGSG+A+GR L AILENY ++DG VTIP +L+ Sbjct: 359 SDFQARRMKTRYKKKKEKSNSFVHTLNGSGLAIGRTLAAILENYQDSDGRVTIPKILQKK 418 Query: 416 YMNNLAVI 423 YM + I Sbjct: 419 YMQGIEYI 426 >gi|242041875|ref|XP_002468332.1| hypothetical protein SORBIDRAFT_01g043930 [Sorghum bicolor] gi|241922186|gb|EER95330.1| hypothetical protein SORBIDRAFT_01g043930 [Sorghum bicolor] Length = 458 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 136/442 (30%), Positives = 218/442 (49%), Gaps = 15/442 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R NP+ + + + R + + +++LD R ++ IR N+ S Sbjct: 1 MLDINLFRADKGGNPDLIRESQRSRFASVELVDEVIALDMAWRGKQFDLDKIRQELNATS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ A L T +K++L E E E S+L ++ I N+ + VP+ Sbjct: 61 KKIGKLKASKQEEEAKKLMESTDEIKKRLAAKEVEVQEAKSTLDAKVTTIGNIVHDSVPV 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N ++R+ G+K + H ++ L ++ ++ ++G R L G L Sbjct: 121 SDDEANNKIVRTFGEKRV-EENLKNHVDLCRMLDIVALEKGADVAGGRGFYLKGDGVFLN 179 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +AL F + + G+ + P +R E M Q+ +F ++++ T + ++LI TS Sbjct: 180 QALINFGLAF-LRKRGFEPMQTPFFMRKETMAKCAQLAQFDEELYKVTGDGEDKYLIATS 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+++ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 239 EQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSP 298 Query: 293 E--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 DS+ HE ML +E+ K + L Y+VVS+ +G L +A K YDLE W +RE+ Sbjct: 299 NGNDSWEMHEEMLKNSEDFYKEIGLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTFREL 358 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C +FQSRR+ Y + + +S +F H LN + A R L ILEN+ DG V Sbjct: 359 VSCSNCTDFQSRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKEDG-VE 417 Query: 409 IPTVLRPYMNNLAVIKKEHILE 430 +P L+PYM + + + L+ Sbjct: 418 VPKALQPYMGGIEFLPFKQPLD 439 >gi|229494079|ref|ZP_04387846.1| seryl-tRNA synthetase [Rhodococcus erythropolis SK121] gi|229319012|gb|EEN84866.1| seryl-tRNA synthetase [Rhodococcus erythropolis SK121] Length = 417 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 146/420 (34%), Positives = 235/420 (55%), Gaps = 10/420 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NPE + + + R +P + +L D R + +++RA + + ++G Sbjct: 1 MIDLKFLRENPEIVRESQRTRGEDPGLVDALLEADASRRAAVLTGDNLRAEQKAFGKKVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E + L + L ++ E +HE ++L I NV E P G Sbjct: 61 QASPEERPA----LLEGSKELAAKVKEAEAAQHEAQAALDSAHRAISNVVQEGAPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L VG+ P ++H E+GE+LGL+D +R K+SG+RF +TG + + Sbjct: 117 DYIVLEH-VGEIPKFDFEPKDHLELGESLGLIDMERGAKVSGSRFYFMTG-YGAMLQLGL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 + +G+T + P+LVR E M GTG + +D+++ D +L+ TSEV + Sbjct: 175 LQLAAQKAIANGFTMMIPPVLVRPEIMAGTGFLGAHSDEIYHLQDDDLYLVGTSEVPMAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI+E P R+ + FR EAGS G+DTRG++R HQF K E+ + R ED+ E Sbjct: 235 YHSGEILELNEGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCRPEDADAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L ++L +D+ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 295 HQRLLGWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQGTYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD N K + TLNG+ +A R +++ILEN+ ADGSV +P L P++ Sbjct: 355 FQARRLGVRYRDENGK-PQTAATLNGT-LATTRWIVSILENHQQADGSVRVPEALVPFVG 412 >gi|212692033|ref|ZP_03300161.1| hypothetical protein BACDOR_01528 [Bacteroides dorei DSM 17855] gi|237724685|ref|ZP_04555166.1| seryl-tRNA synthetase [Bacteroides sp. D4] gi|265755598|ref|ZP_06090219.1| seryl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] gi|212665425|gb|EEB25997.1| hypothetical protein BACDOR_01528 [Bacteroides dorei DSM 17855] gi|229436880|gb|EEO46957.1| seryl-tRNA synthetase [Bacteroides dorei 5_1_36/D4] gi|263234204|gb|EEZ19797.1| seryl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] Length = 424 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 155/427 (36%), Positives = 229/427 (53%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I N E + L+K+H + E +L+ ++K R +++ A NS S Sbjct: 1 MLTIKQITDNTEEVIRGLEKKHFKDAKATIEQVLAFNDKRRSTQNQLDKNLAEVNSLSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG + K + +KE L+ E + + L+ IPNVP + VP G Sbjct: 61 IGQLMKEGKKEDAETAKTRVAEIKETSKALQAEMDKAQEDMTNLLYTIPNVPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 SA +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 SAEDNVVEKMGGMETELPKNALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D GY E+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARASGYEEIMPPTVVNTASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +LK+L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLKKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRSAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVI 423 +I Sbjct: 418 C-GFEMI 423 >gi|33519843|ref|NP_878675.1| seryl-tRNA synthetase [Candidatus Blochmannia floridanus] gi|46577210|sp|Q7VR39|SYS_BLOFL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|33504188|emb|CAD83450.1| seryl-tRNA synthetase [Candidatus Blochmannia floridanus] Length = 436 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 169/433 (39%), Positives = 250/433 (57%), Gaps = 12/433 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + + E + L +++ + + ++ +IL KKIE ++ R + S I Sbjct: 1 MLDTNLLFNHFEWVAKKLARKNFVLNFDELNQYNDLRKILQKKIEKLQIDRKNLSKTI-- 58 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A+ + +L+ + L ++L +++ E + S +K+ IPN+P +E+P G Sbjct: 59 ILAKSQQINLQSLQKQARLLNQKLILIKSEIRTLKSKIKQYQLSIPNIPDDEIPNGFKDQ 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI I GK +H +G+ +G +D A+K++G RF +L G +A+L RAL Q Sbjct: 119 DNIEIMRWGKVHKYDFKLLDHITLGKLIGGIDLSSASKITGTRFIILKGEIAYLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----------TDGRWLIP 230 FMID+H HGY E P L+ E++YG+GQ+PKF DD+F T LIP Sbjct: 179 FMIDIHIQNHGYIEYYLPYLINVESLYGSGQLPKFYDDLFHTQSVVSVNSSKCSTYTLIP 238 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV L N+ + LP++ P FR EAG+ G G++R HQF K ELV + Sbjct: 239 TAEVPLVNIMRSVTVHKNELPIKMVAHTPCFRLEAGTYGYRAHGLIRTHQFDKVELVQVV 298 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + S E + + AE+IL+ L+L YR + LC G++ F++CKTYDLEVWL +N Y EI Sbjct: 299 HPDQSVQALEEITNHAEKILQLLELPYRKMLLCAGNISFTSCKTYDLEVWLPARNEYCEI 358 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS +FQSRR+N+R++D +K K HTLN SGVAVGR L+AILENY +G + IP Sbjct: 359 SSCSNIRDFQSRRINARFKDGINKRSKLLHTLNASGVAVGRALVAILENYQLENGCIKIP 418 Query: 411 TVLRPYMNNLAVI 423 VL PYMN + I Sbjct: 419 EVLSPYMNGMTHI 431 >gi|331010750|gb|EGH90806.1| seryl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 358 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 180/357 (50%), Positives = 240/357 (67%), Gaps = 4/357 (1%) Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 L + + +L + E + + L L+ IPN+P E VP+G N+ +R G Sbjct: 1 APLMADVERMGNELSEGKVELDGIQAELDALVLSIPNLPHESVPVGADEEGNVEVRRWGT 60 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 + ++H +GE G +DF+ A KLSGARF++L G +A L RAL QFMI+LH +EH Sbjct: 61 PTAFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQFMINLHINEH 120 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSLTNLYSHEIIE 246 GY E P LV+ A+ GTGQ+PKF +D+F T +LIPT+EVSLTN+ S EI++ Sbjct: 121 GYEETYTPYLVQAPALQGTGQLPKFEEDLFKITREGEADLYLIPTAEVSLTNIVSGEILD 180 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 +K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I EDS E + A Sbjct: 181 AKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPEDSMAALESLTGNA 240 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 E +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS CG+FQ+RRM + Sbjct: 241 ERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNCGDFQARRMQA 300 Query: 367 RYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 R+R+P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PYM L VI Sbjct: 301 RWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPYMGGLEVI 357 >gi|260911944|ref|ZP_05918509.1| serine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] gi|260633967|gb|EEX52092.1| serine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] Length = 429 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 151/422 (35%), Positives = 236/422 (55%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H + E +L D++ R +K++ + NS S Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFKGAREAVEKVLETDKRRREAQQKLDKNKQEANSMSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G + +K + + KE L+ E L L+ IPN+P + VP G Sbjct: 61 IGMLMKDGKTQEAEEVKAKVAVYKENDKQLQTLMAEAEQELTALLCNIPNIPADNVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 AN+N++++ G P + H+++ + L+DFD K++GA F + G +A L+RA Sbjct: 121 DANDNVVVKEGGVIPQLPEDALCHWDLCKKYNLIDFDLGVKITGAGFPIYIGKMARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L F ++ + GY EV PL+V + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLEE-ARKSGYLEVQPPLVVNQASGYGTGQLPDKEGQMYHAEQDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ I++ K LP+ + FR EAGS G+D RG+ R HQF K E+V I + E S Sbjct: 240 TNIFRDVILDEKDLPVMRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSH 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H++ML E +L++L+L Y ++ LC GD+ F+A YD EVW A Q + E+SS S Sbjct: 300 ESHKKMLEHVEGLLQKLELPYHILLLCGGDMSFTASICYDFEVWSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G++Q+ R+ RYR K ++ HTLNGS +A+ R + AI+EN +G + +P VL PY Sbjct: 360 GSYQANRLKCRYRHTEDKKIELCHTLNGSALALPRIVAAIIENNQTPEG-IRVPKVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|154174789|ref|YP_001407731.1| seryl-tRNA synthetase [Campylobacter curvus 525.92] gi|166201244|sp|A7GWY9|SYS_CAMC5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|112803595|gb|EAU00939.1| seryl-tRNA synthetase [Campylobacter curvus 525.92] Length = 414 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 259/419 (61%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M++++ + N E+ L+ +++ + +L + + + +ED++A +NS S ++G Sbjct: 1 MINLKLLESNYENFVSKLRGKNINEDVLKSLLDTFNELKKQRQILEDLQAVQNSKSKELG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 G V LK E S KE L + + L + S +PN+ ++VP G Sbjct: 61 ALARSGG--DVAGLKEELSKNKEALGAQNEIVRTLEEKLDNIASNVPNITDDDVPFGRDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ I+ V + H+E+GE LG +DF+R K+SG+RF++L G A L RAL Sbjct: 119 EDNVCIKKVLNPREFSFTPKAHYELGEQLGWLDFERGAKISGSRFTILRGEAARLSRALV 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 +MID + S G+ V+ P LV +YGTGQ+PKF DD++ D +LIPTSEV +TN Sbjct: 179 NYMIDFN-SARGFELVNVPFLVNSNTLYGTGQLPKFEDDLYKVRDEDLYLIPTSEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y+ EII+++ LP++ T + FR EAGSAGRDTRGM+RQHQF K ELVSIT+ E S Sbjct: 238 IYNDEIIDAEILPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELVSITKPEQSEQI 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M++CA ++L L L +R + LC+GDLGFSA KT DLEVWL QN YREISS S + Sbjct: 298 LDEMVACASDLLASLGLPHRHMLLCSGDLGFSAAKTIDLEVWLPSQNKYREISSVSNTRD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR R++D K +TLNGS +AVGR LIAI+ENY DG++ IP+VL+ YM Sbjct: 358 FQARRAKIRFKD--GKKNALVNTLNGSSLAVGRTLIAIMENYQRQDGTIEIPSVLKRYM 414 >gi|302789692|ref|XP_002976614.1| hypothetical protein SELMODRAFT_105474 [Selaginella moellendorffii] gi|300155652|gb|EFJ22283.1| hypothetical protein SELMODRAFT_105474 [Selaginella moellendorffii] Length = 456 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 144/435 (33%), Positives = 223/435 (51%), Gaps = 16/435 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI +RQ +PE + + ++R+ + + ++ +D++ R L ++E +R N S Sbjct: 1 MLDINLVRQEKGGDPERVRESQRRRYASVELVDEVIQIDKEWRKLQHEVEGLRREGNRLS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG N LK + L L EKE V S+L + I N+ + VP+ Sbjct: 61 KEIGLKFR--NKEDPSELKQKKLDLDNSLVSKEKEVESVKSTLDGKLKLIGNLVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 +N +IR+ G+ + H ++ E LG D R T ++G R L GH L Sbjct: 119 DNDEEKNAVIRTWGELRQ-EKNLKNHVDLVECLGFADIKRGTDVAGGRGYYLKGHGVLLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSE 233 +AL F + T + GY+ + P ++ + M Q+ +F ++++ D ++LI TSE Sbjct: 178 QALINFGLAFLT-KRGYSPLQPPYFMKKDVMKECAQLAQFDEELYKLAEKDEKYLIATSE 236 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE- 292 L + + ++ KSLP+R+ L+ FR EAGS GRDT G+ R HQF K E IT Sbjct: 237 QPLCAYHRGDWMDPKSLPIRYAGLSTCFRKEAGSHGRDTLGIFRVHQFDKIEQFCITSPL 296 Query: 293 -EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ HE ML +E+ + L + Y+VV + +G L +A K YDLE W YRE+ Sbjct: 297 GDESWKMHEEMLKNSEDFYQELGIPYQVVVIVSGALNDAAAKKYDLEAWFPASKAYRELV 356 Query: 352 SCSTCGNFQSRRMNSRYR--DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 SCS C ++Q+R ++ RY N + F H LN + A R L ILENY DG + + Sbjct: 357 SCSNCTDYQARNLDIRYGQTTANEQPKHFVHLLNSTLTATQRTLCCILENYQTEDG-LRV 415 Query: 410 PTVLRPYMNNLAVIK 424 P L+PYM L I Sbjct: 416 PKALQPYMAGLEFIP 430 >gi|255017620|ref|ZP_05289746.1| seryl-tRNA synthetase [Listeria monocytogenes FSL F2-515] Length = 373 Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 163/370 (44%), Positives = 236/370 (63%), Gaps = 3/370 (0%) Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + + E + E + +++ L+ E E+ L ++ IPN+P E P+ Sbjct: 3 KKXAKLKREKQDADAK--IEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNIPHESTPV 60 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G S ++N+ IR G+ + + H+++G L ++DF+ A K++G+RF A LE Sbjct: 61 GESEDDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLE 120 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEV 234 RAL FM+DLH++EHGY E+ P +V +M GTGQ+PKF +D F + IPT+EV Sbjct: 121 RALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEV 180 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +TN + +I++++ LP ++T + FRSEAGSAGRDTRG++RQHQF K ELV + ED Sbjct: 181 PVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPED 240 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S+ E++ AEE+L+RL+L YRV+S+CT DLGF+A K YDLEVW+ N YREISSCS Sbjct: 241 SYAALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNSYREISSCS 300 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY +ADGSV IP VL+ Sbjct: 301 NFESFQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDADGSVRIPKVLQ 360 Query: 415 PYMNNLAVIK 424 YM + I+ Sbjct: 361 GYMGGIEKIE 370 >gi|300742531|ref|ZP_07072552.1| serine--tRNA ligase [Rothia dentocariosa M567] gi|300381716|gb|EFJ78278.1| serine--tRNA ligase [Rothia dentocariosa M567] Length = 434 Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 149/437 (34%), Positives = 230/437 (52%), Gaps = 19/437 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI +R+NPE + + R + + IL D R I E++RA +N+ Q+ Sbjct: 1 MIDINLLRENPEIFRASQRARGKDEAHVDRILEADAARRASIGTYENLRAEQNAFGKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + L + L + + + ++L+S I N+ ++ VP G Sbjct: 61 KAPKEEKPA----LVAQAKELAAHVANAKAASEAKTAEYEELLSSIENLIIDGVPTGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L + + R+H EIGE +G +D R K+SG+RF L G +A LE+A Sbjct: 117 DFVVLKEVGTPRDFAAEGFEPRDHLEIGELIGGIDMARGAKVSGSRFYFLKGQVARLEQA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L +DL T +G+T ++ P LVR E M GTG K D+++ D +L+ TSEV+L Sbjct: 177 LMWMALDLAT-ANGFTMMTTPTLVRPEIMNGTGFNVKHDDEIYRLERDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EI++ P ++ + +R EAG+AG+DTRG++R HQF K E+ + E + Sbjct: 236 AGYHMDEILDLSDGPKKYLGWSSCYRREAGAAGKDTRGIIRVHQFNKAEMFVYCQVEQAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE+M + EE+L++ L YRV+ GDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 EIHEQMRALEEEMLQKCGLAYRVIDTAAGDLGTSAARKFDCEAWVPTQGTYRELTSTSNC 355 Query: 357 GNFQSRRMNSRYRDPN---------SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 +Q+RR+N R R + + TLNG+ +A R ++AILE + DGSV Sbjct: 356 TTYQARRLNIRERTADTVDDAGNVRKGRTRAVATLNGT-LATTRWVVAILETHQQPDGSV 414 Query: 408 TIPTVLRPYMNNLAVIK 424 IP LRPYM VI Sbjct: 415 RIPEALRPYMGGAEVIP 431 >gi|311112424|ref|YP_003983646.1| serine--tRNA ligase [Rothia dentocariosa ATCC 17931] gi|310943918|gb|ADP40212.1| serine--tRNA ligase [Rothia dentocariosa ATCC 17931] Length = 434 Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 149/437 (34%), Positives = 230/437 (52%), Gaps = 19/437 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI +R+NPE + + R + + IL D R I E++RA +N+ Q+ Sbjct: 1 MIDINLLRENPEIFRASQRARGKDEAHVDRILEADAARRASIGTYENLRAEQNAFGKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + L + L + + + ++L+S I N+ ++ VP G Sbjct: 61 KAPKEEKPA----LVAQAKELAAHVANAKAASEAKTAEYEELLSSIENLIIDGVPTGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L + + R+H EIGE +G +D R K+SG+RF L G +A LE+A Sbjct: 117 DFVVLKEVGTPRDFAAEGFEPRDHLEIGELIGGIDMARGAKVSGSRFYFLKGQVARLEQA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L +DL T +G+T ++ P LVR E M GTG K D+++ D +L+ TSEV+L Sbjct: 177 LMWMALDLAT-ANGFTMMTTPTLVRPEIMNGTGFNVKHDDEIYRLERDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EI++ P ++ + +R EAG+AG+DTRG++R HQF K E+ + E + Sbjct: 236 AGYHMDEILDLSDGPKKYLGWSSCYRREAGAAGKDTRGIIRVHQFNKAEMFVYCQVEQAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE+M + EE+L++ L YRV+ GDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 EIHEQMRALEEEMLQKCGLAYRVIDTAAGDLGTSAARKFDCEAWVPTQGTYRELTSTSNC 355 Query: 357 GNFQSRRMNSRYRDPN---------SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 +Q+RR+N R R + + TLNG+ +A R ++AILE + DGSV Sbjct: 356 TTYQARRLNIRERTADTVDDVGNVRKGRTRAVATLNGT-LATTRWVVAILETHQQPDGSV 414 Query: 408 TIPTVLRPYMNNLAVIK 424 IP LRPYM VI Sbjct: 415 RIPEALRPYMGGAEVIP 431 >gi|255003232|ref|ZP_05278196.1| seryl-tRNA synthetase [Anaplasma marginale str. Puerto Rico] Length = 435 Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 205/430 (47%), Positives = 273/430 (63%), Gaps = 7/430 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 DI+ I+++PE D A+ R Q+E I+ LD K + + + +R +RN+ + ++ Sbjct: 10 HDIELIKKDPELFDRAMISRGFGEQAEKIIELDLKKK--LSTLYSLREQRNAVTREVALL 67 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 G + L E++ LE + + L L+ +PNVP VP+G + Sbjct: 68 KRSGI--ECTPQIEASKKLAEEIETLEH-SIKEDTKLSNLLESLPNVPDPIVPVGKDESH 124 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 N+ +RS G++ R H+E+GE L L+DF RA LSGARFS+L G LA LERAL F Sbjct: 125 NVEVRSHGQRRDFAFGIRPHYELGEMLNLLDFKRAAVLSGARFSILKGQLAELERALASF 184 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS 241 M+D+HT E GYTE+S P+LV + MY GQ+PKF DD F TT+ L PTSEV+L NL S Sbjct: 185 MLDMHTKEFGYTEISHPVLVNERTMYNVGQLPKFHDDSFRTTNNFRLAPTSEVALANLVS 244 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + SLP+RFT + FR+EAGSAG DTRGM+RQHQF K ELVSIT + S E ER Sbjct: 245 GTTLPRDSLPMRFTAYSQCFRAEAGSAGLDTRGMMRQHQFGKVELVSITTSDASNAELER 304 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 M S AEE+LKRL+L YRV+ LC+GD+GFSA +YDLEVW+ Q+ YREISSCS C +FQ+ Sbjct: 305 MTSIAEEVLKRLELPYRVMLLCSGDMGFSASISYDLEVWMPAQDKYREISSCSNCRDFQA 364 Query: 362 RRMNSRYRDPNSKSLK--FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 RRM ++Y +K HTLNGS +A+GR + AI+ENY N DGS+TIP VLR Y Sbjct: 365 RRMGAKYFFFENKKKHSTLVHTLNGSALAIGRTIAAIMENYQNEDGSITIPDVLRKYTGT 424 Query: 420 LAVIKKEHIL 429 A+++ E L Sbjct: 425 SAIMRAEDAL 434 >gi|320094982|ref|ZP_08026702.1| serine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978094|gb|EFW09717.1| serine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] Length = 424 Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 141/430 (32%), Positives = 225/430 (52%), Gaps = 13/430 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NPE + + R +P + I+ D R +++ E +RA + S +G Sbjct: 1 MIDVRALRENPEPAKDSQRARGADPGLVDEIIEADAARRGALQEFESLRATQKEVSKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + + + L EQ+ E + + +L +PN+ L+ VP G Sbjct: 61 RASKEERPA----ILAKAKELAEQVKAAEAAANAADAEADRLARLLPNLVLDGVPRGGED 116 Query: 120 NENILIRSVGKKPSA---IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +L ++H +GE L +D R K+SGARF L G A LE Sbjct: 117 DYTVLRHEGPAPRDFAAEGFEPKDHLALGEGLDAIDTKRGAKVSGARFYYLKGVGARLEL 176 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL +D G+ + P LV + M GTG + + +D+++ D +L TSEV+ Sbjct: 177 ALMSMALD-QAHRAGFVPMMTPTLVSPQIMGGTGFLGEHSDEIYYLPADDLYLTGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EI++ P R+ + +R EAG+AG+DTRG++R HQF K E+ S R ED+ Sbjct: 236 LAGYHADEILDLSDGPKRYLGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEDA 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH R L+ EE+L + +L YRV+ GDLG SA + +D E WL Q Y E++S S Sbjct: 296 AEEHARFLAWEEEMLAKAELPYRVIDTAAGDLGTSAARKFDCEAWLPTQERYMEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+ R R + + TLNG+ +A R L+A+LEN+ DGS+ +P +RP Sbjct: 356 CTTFQARRLGIRERREDGTAP--VATLNGT-LATTRWLVALLENHQRPDGSIRVPEAMRP 412 Query: 416 YMNNLAVIKK 425 Y+ + ++ Sbjct: 413 YLGGVEALEP 422 >gi|160887095|ref|ZP_02068098.1| hypothetical protein BACOVA_05111 [Bacteroides ovatus ATCC 8483] gi|237721366|ref|ZP_04551847.1| seryl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|293369930|ref|ZP_06616501.1| serine--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|299148593|ref|ZP_07041655.1| serine--tRNA ligase [Bacteroides sp. 3_1_23] gi|156107506|gb|EDO09251.1| hypothetical protein BACOVA_05111 [Bacteroides ovatus ATCC 8483] gi|229449162|gb|EEO54953.1| seryl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|292634976|gb|EFF53497.1| serine--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|298513354|gb|EFI37241.1| serine--tRNA ligase [Bacteroides sp. 3_1_23] Length = 424 Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 149/422 (35%), Positives = 231/422 (54%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N E + L+K+ + + + +++L++K R +++ A NS S Sbjct: 1 MLTIKQITENTEAVLRGLEKKHFKNAKETIDQVIALNDKRRSTQNELDKNLAEVNSLSRT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG + + + LKE L+ + + ++ ++ IPN+P + VP G Sbjct: 61 IGQLMKEGKKEEAETARARVAELKEGNKELDAAMTQAATDMQNVLYTIPNIPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+E K LP+ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILEEKQLPIMNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR+ K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRNAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MN 418 Sbjct: 418 CG 419 >gi|53712299|ref|YP_098291.1| seryl-tRNA synthetase [Bacteroides fragilis YCH46] gi|60680477|ref|YP_210621.1| seryl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|253563663|ref|ZP_04841120.1| seryl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|265762490|ref|ZP_06091058.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|52215164|dbj|BAD47757.1| seryl-tRNA synthetase [Bacteroides fragilis YCH46] gi|60491911|emb|CAH06670.1| putative seryl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|251947439|gb|EES87721.1| seryl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|263255098|gb|EEZ26444.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|301162011|emb|CBW21555.1| putative seryl-tRNA synthetase [Bacteroides fragilis 638R] Length = 424 Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 147/422 (34%), Positives = 229/422 (54%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N + + L+K+ + ++ +++K R +++ A NS S Sbjct: 1 MLTIKQITENTDAVIRGLEKKHFKGAKETIAQVIEVNDKRRNTQNQLDKNLAEVNSLSKT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG + K + +KE L+ + + + + L+ IPN+P + VP G Sbjct: 61 IGQLMKEGKKEEAEVAKARVAEIKESNKTLQADMDQAANDMLNLLYTIPNIPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVEKMGGMETQLPTDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSR 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN+ +G + IP L PY Sbjct: 360 DTYQANRLKCRYR-SGEKKTELCHTLNGSALALPRIVAALLENHQTPEG-IRIPKALVPY 417 Query: 417 MN 418 Sbjct: 418 CG 419 >gi|320535443|ref|ZP_08035552.1| seryl-tRNA synthetase [Treponema phagedenis F0421] gi|320147730|gb|EFW39237.1| seryl-tRNA synthetase [Treponema phagedenis F0421] Length = 468 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 143/430 (33%), Positives = 244/430 (56%), Gaps = 10/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I++N + + R++ ++ +++L + L+ +++ ++A+RN N+ + Sbjct: 44 MLDYRFIKENLAAVKKNITDRNMHADADAVVTLFDARTELVTELQGLQAKRNENAQ---K 100 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + L LK ++ +E + E L++ IPN+ + PIG Sbjct: 101 MKQKLEPEERNQLVEAGKVLKTEIAEVEAKLGETEKKLEEAARLIPNMAHPDAPIGKEDK 160 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N ++ VG PS ++H ++GEAL ++DFD TK+SG +F L LE+AL Sbjct: 161 DNTEVKRVGVVPSFDFEPKDHVQLGEALDIVDFDAGTKVSGVKFYYLKNEGVFLEQALIL 220 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR--WLIPTSEVSLTN 238 + +++ +HG+T P + ++E + G G IP+ + T +G L+ T+E++L Sbjct: 221 YGLNV-LRKHGFTPFITPDIAKEEILQGIGFIPRGEESNVYTLEGEGTCLVATAEITLGG 279 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI+ LPL + L+ FR EAG+AG+ ++G+ R HQF K E+ E+S + Sbjct: 280 YHADEILSQTKLPLLYCGLSHCFRREAGAAGQFSKGLYRVHQFTKLEMFVYCLPEESDSW 339 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN--LYREISSCSTC 356 HE++ + EE+ LD+ +RVV CTGDLG A + +DLE W+ G+N + EI+S S C Sbjct: 340 HEKLRAIEEELFIGLDIPFRVVDTCTGDLGAPAYRKWDLEAWMPGRNGGEWGEITSTSNC 399 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+RR+N RY+D + K+ KF H LNG+ +AV R L+AI+ENY DGS+ +P L PY Sbjct: 400 TDYQARRLNVRYKDTDGKN-KFVHMLNGTAIAVSRALVAIIENYQQKDGSIKVPAALIPY 458 Query: 417 MNNLAVIKKE 426 IK + Sbjct: 459 C-GFDTIKAK 467 >gi|227496500|ref|ZP_03926782.1| serine--tRNA ligase [Actinomyces urogenitalis DSM 15434] gi|226833991|gb|EEH66374.1| serine--tRNA ligase [Actinomyces urogenitalis DSM 15434] Length = 424 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 143/430 (33%), Positives = 220/430 (51%), Gaps = 11/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NPE + + R + + I+ DE R + E +RA + S +G Sbjct: 1 MIDLRDLRENPERYRDSQRARGADVDLVDRIIDADEARRTTLATFESLRAEQKVVSRSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP--LEEVPIGT 117 +A + +A + L E++ + E + ++L +L NV Sbjct: 61 KASS---PQEREAALAQAKELAERVRGAQAESDQAAATLDELAHQFQNVIEGAPSGGEED 117 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +H +GE L ++D R K+SG+RF L G LE A Sbjct: 118 YVVLRHEGPQPRDFASEGFEPADHLTLGEGLDIIDTKRGAKVSGSRFYYLKGAGMRLELA 177 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L +D T EHG+ ++ P LV + M GTG + AD+++ D +L TSEV+L Sbjct: 178 LMTAALDKAT-EHGFIPMTTPTLVSPQVMGGTGFLGLHADEIYYLPADDLYLTGTSEVAL 236 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 ++ EI++ + P R+ + +R EAG+AG+DTRG++R HQF K E+ + R ED+ Sbjct: 237 AGYHTDEILDLEEGPKRYLGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFAYVRPEDAA 296 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHER+L+ EE+L + L YRV+ GDLG SA + +D E WL QN + E++S S C Sbjct: 297 AEHERLLALEEEMLHLVGLPYRVIDTAAGDLGSSAARKFDCEAWLPTQNRWMEVTSTSNC 356 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+RR+ R R TLNG+ +A R ++A+LEN ADG+V +P LRPY Sbjct: 357 TTYQARRLQIRERR--DGRTSPVATLNGT-LATTRWIVALLENNQQADGTVVVPEGLRPY 413 Query: 417 MNNLAVIKKE 426 M L VI Sbjct: 414 MGGLEVITPR 423 >gi|189459794|ref|ZP_03008579.1| hypothetical protein BACCOP_00423 [Bacteroides coprocola DSM 17136] gi|189433494|gb|EDV02479.1| hypothetical protein BACCOP_00423 [Bacteroides coprocola DSM 17136] Length = 424 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 149/428 (34%), Positives = 232/428 (54%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I ++ + + L+K+ + + ++ L++K R +++ A NS S Sbjct: 1 MLTIKQITEDTDKVIRGLEKKHFANAKETIAQVIELNDKRRNAQNQLDRNLAEVNSISKN 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + K + +KE L+ E + ++ L+ IPNVP +EVP G Sbjct: 61 IGLLMKEGKKEEAETAKARVAEIKEVSKSLQAEMDQAAEDMQNLLYTIPNVPYDEVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N +++ G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNEVVKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGQGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D GY E+ P +V + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LINFFLDE-ARAAGYEEIMPPTVVNAASGYGTGQLPDKEGQMYHCNLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR+ + K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRNAD-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVIK 424 +IK Sbjct: 418 C-GFDMIK 424 >gi|260171593|ref|ZP_05758005.1| seryl-tRNA synthetase [Bacteroides sp. D2] gi|315919907|ref|ZP_07916147.1| seryl-tRNA synthetase [Bacteroides sp. D2] gi|313693782|gb|EFS30617.1| seryl-tRNA synthetase [Bacteroides sp. D2] Length = 424 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 149/422 (35%), Positives = 231/422 (54%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N E + L+K+ + + + +++L++K R +++ A NS S Sbjct: 1 MLTIKQITENTEAVLRGLEKKHFKNAKETIDQVIALNDKRRSTQNELDKNLAEVNSLSRT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG + + + LKE L+ + + ++ ++ IPN+P + VP G Sbjct: 61 IGQLMKEGKKEEAETARARVAELKEGNKELDAVMTQAATDMQNILYTIPNIPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+E K LP+ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILEEKQLPIMNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR+ K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRNAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MN 418 Sbjct: 418 CG 419 >gi|212716356|ref|ZP_03324484.1| hypothetical protein BIFCAT_01273 [Bifidobacterium catenulatum DSM 16992] gi|212660609|gb|EEB21184.1| hypothetical protein BIFCAT_01273 [Bifidobacterium catenulatum DSM 16992] Length = 444 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 140/431 (32%), Positives = 234/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L DE R +K+ E RA++ +IG Sbjct: 17 MLDIQFIREHADVVKESQRKRGESVELVDEVLRSDEVRRSSLKEFEAARAQQ----KEIG 72 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A L ET L +++ + + + NV E P G Sbjct: 73 KKVAAAPADEKAKLIAETKELSQKVSEYKAAADAAAEEYTTAMWKLSNVVEPEAPEGGED 132 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D +R K+ G+RF L G +A ++ A Sbjct: 133 DYVVVKKVGQIRDFAAEGFEPKDHLTLGRGVAGIDMERGVKVGGSRFYFLRGQVARMQIA 192 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 193 MLTMAVD-QAQEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDEQYLVGTSEVA 251 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ PLR+ + +R EAG+AG+DT G++R HQF K E+ T++EDS Sbjct: 252 LAGMHENEILDLSDGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYTKQEDS 311 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE +L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 312 YKEHEHLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 371 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AILEN+ DGS+ IP +R Sbjct: 372 CTEYQARRLNIRERMEDGG-TRAVSTLNGT-LATTRWLVAILENHQQKDGSIVIPQAMRA 429 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 430 YMGGKEVIEPT 440 >gi|84490065|ref|YP_448297.1| seryl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091] gi|121721559|sp|Q2NEU9|SYS_METST RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|84373384|gb|ABC57654.1| SerS [Methanosphaera stadtmanae DSM 3091] Length = 424 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 139/428 (32%), Positives = 230/428 (53%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R+ P + + KKR + E ++ D R ++ + ++R+ +N S Sbjct: 1 MLDIKLFREEPNKIFDSEKKRFRDTINVEKVIEYDNLWREGLQNLNNLRSEKNKLSKSFK 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA +GNL V +++ + + LE + E + + N+ E VP+ + Sbjct: 61 QAKKDGNLEEV---ISKSKKVASDIKELEPKIEEYERIRDEYRYKVGNIIDENVPVSDTE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N +IR+ G PS H ++ + D D A++++G+RF L + L AL Sbjct: 118 DDNEVIRTNGDFPSFDFEPLNHVDLINLIDGADTDTASQIAGSRFYYLKQDILFLNLALI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 QF ++ + GYT + P ++ E T ++ +F + ++ + +LI T+E +L Sbjct: 178 QFALNE-LKDKGYTPLQTPFFIKSEVAEETSELGEFEETLYKVENEDLYLIATAEQTLAA 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ +EII+S+ LPLR+ L+ FR EAGS G+DT G+ R HQF K E E+S E Sbjct: 237 LHRNEIIDSEDLPLRYCALSTCFRKEAGSHGKDTLGIFRVHQFEKVEQFIYATPENSTLE 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE++L E I ++L L Y++V++ + L +A YDLE W G YRE+ SC+ C + Sbjct: 297 HEKLLEVTEGIYQKLGLPYQIVAIVSSALNDNAAIKYDLEAWFPGSGTYRELVSCTNCKD 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+R++N+RY + + HTLN + +A R + ILENY DGS+ IP VL PYMN Sbjct: 357 YQARKINTRYGKAGAGDAQILHTLNSTAIATERTICCILENYQQEDGSIKIPDVLIPYMN 416 Query: 419 NLAVIKKE 426 +I+ + Sbjct: 417 GKTIIEAK 424 >gi|115378515|ref|ZP_01465672.1| seryl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|115364484|gb|EAU63562.1| seryl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 369 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 188/368 (51%), Positives = 246/368 (66%), Gaps = 3/368 (0%) Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + A+ + +DAL+ + + +++ E EV + +++ IPN+P E VP G S Sbjct: 2 KRKAKEDPKALDALRGDLRAVSQEIKEKEARLKEVEEEISRILLLIPNIPHESVPTGASE 61 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N++ R+ G+KP + R+HFEIGE LG++DF+RA K+SG+RF+ LA LERAL Sbjct: 62 QDNVVTRTWGEKPDFLFTPRQHFEIGEKLGMLDFERAAKVSGSRFTFYKAALARLERALV 121 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLT 237 FMID+HT + GYTE+ P LV E M GTGQ+PKF DD F T R+LIPT+EV +T Sbjct: 122 TFMIDVHT-QKGYTELLPPYLVLRETMMGTGQLPKFEDDAFKTSGDPERFLIPTAEVPVT 180 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N +S EI+E LPL++ +P FR+EAG+AGRDTRG++RQHQF K ELV E S + Sbjct: 181 NYHSDEILEGGQLPLKYCAFSPCFRAEAGAAGRDTRGLIRQHQFHKVELVKFATPETSLS 240 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E M A +IL+RL LH+RV+ LCTGD+GF+A KT+D+EVWL GQ YREISSCS CG Sbjct: 241 ELEGMTDDACDILRRLGLHHRVMLLCTGDMGFAARKTFDIEVWLPGQGAYREISSCSDCG 300 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RYR + HTLNGSG+AVGR IAILENY DGSV IP L PYM Sbjct: 301 DFQARRAKIRYRAQKGDKPQLLHTLNGSGLAVGRTSIAILENYQREDGSVAIPDALVPYM 360 Query: 418 NNLAVIKK 425 L I+ Sbjct: 361 GGLKEIRP 368 >gi|269217577|ref|ZP_06161431.1| serine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212512|gb|EEZ78852.1| serine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] Length = 420 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 147/427 (34%), Positives = 232/427 (54%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+++R+NP+ + + ++R + + +L+ DE R ++ E RA + S IG Sbjct: 1 MIDIRFVRENPDAVRESQRRRGNDEASVDALLAADEARRSALQAFETARASQKELSRSIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + + E L E++ LE + + + I N+ LE VP G Sbjct: 61 KASPEERPA----VLAEAKALAERVKELEAAANGAEQEYLQANAAIQNIVLEGVPAGGEE 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L VG+ ++H ++ EAL +D R TK+SG+RF L G A LE AL Sbjct: 117 DYEVLKH-VGEPRVFDFEPKDHLDVAEALDAIDMARGTKVSGSRFYYLKGVGARLELALL 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +D G+T ++ P LV + M GTG + +D+++ D ++L+ TSEV+L Sbjct: 176 TMAVD-QAEAAGFTMMTTPTLVNPDIMAGTGFLGAHSDEIYYLPADDQYLVGTSEVALAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI++ + PLR+ + +R EAGS G+DTRG++R HQF K E+ S R E++ E Sbjct: 235 YHKDEIVDLSNGPLRYAGWSSCYRREAGSYGKDTRGIIRVHQFNKVEMFSYCRLEEAEEE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R L+ EE+L +++L YRV++ GDLG SA + +D E WL QN + E++S S C Sbjct: 295 HRRFLAWEEEMLAKVELPYRVINTAAGDLGSSAAQKFDCEAWLPTQNRFMEVTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ R R TLNG+ +A R L+A+ EN+ DGS+ IP LRPY+ Sbjct: 355 FQARRLGIRERFDGETRT--AATLNGT-LATTRWLVALFENHQRPDGSLYIPEALRPYLG 411 Query: 419 NLAVIKK 425 + Sbjct: 412 GRESFEP 418 >gi|227872156|ref|ZP_03990526.1| serine--tRNA ligase [Oribacterium sinus F0268] gi|227842014|gb|EEJ52274.1| serine--tRNA ligase [Oribacterium sinus F0268] Length = 440 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 133/430 (30%), Positives = 228/430 (53%), Gaps = 6/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + ++K+ + + + ++SLD + R + + +++R+++N S Q Sbjct: 1 MLDIKFVRENPEIVKENIRKKFQDEKLNLVDEVISLDVEARKVQMEADELRSKKNQVSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG +A+G + K E +T ++L LE++E + + K + IPN+ VPIG Sbjct: 61 IGALMAKGEKEAAEKAKEEVATFSQRLAELEEKEPALQEEILKRMMVIPNIIDPSVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N+ G+ + H +I ++ +D D A +++G F L G +A L A Sbjct: 121 DDSCNVENERFGEPVVPSYPIPYHADIMDSFSGLDLDAAGRVAGNGFYYLVGDVARLHSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T V P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 VLSYARDFMI-DRGFTYVIPPYMIRSKVVDGVMSFAEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +I+ +SLPL T+ +P FR E GS G + RG+ R HQF K E++ + E++ Sbjct: 240 IGRFIDQILPVESLPLTLTSYSPCFRKEKGSHGIEERGVYRIHQFEKQEMIVVCEPEEAM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ++ + + LD+ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 DWYNKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + K+ TLN + VA R LIA LEN+L DG+VTIP L+PY Sbjct: 360 GDAQARRLKIRVKGADGKN-HLAFTLNNTCVAPPRMLIAFLENHLQEDGTVTIPKALQPY 418 Query: 417 MNNLAVIKKE 426 M V+ + Sbjct: 419 MGGKEVLVPK 428 >gi|119963396|ref|YP_945932.1| seryl-tRNA synthetase [Arthrobacter aurescens TC1] gi|166200596|sp|A1R120|SYS_ARTAT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|119950255|gb|ABM09166.1| seryl-tRNA synthetase [Arthrobacter aurescens TC1] Length = 426 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 148/430 (34%), Positives = 234/430 (54%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + +NP+ + + R + + I+S D R + + E +RA +N+ ++ Sbjct: 1 MIDVKDLSENPDKFRASQRARGADESVVDAIISADSDRRAALIRHETLRAEQNAFGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E AL E L + E + ++L+ IPN+ ++ VP G Sbjct: 61 QAKGEEK----QALLAEVKELANSVKAASAEAAAAQAKQEELLRVIPNLVVDGVPEGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L + ++H EIGE +G +D +R K+SG+RF L G A LE AL Sbjct: 117 DYVVLKTVGTPREFTDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALL 176 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q ++ + G+ + P LVR E M GTG K +++ D +L+ TSEV+L Sbjct: 177 QMAME-QAIDAGFVPMITPTLVRPETMQGTGFDVKHDAEIYRLAEDDLYLVGTSEVALAG 235 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + P+R+ + +R EAGS G+DTRG++R HQF K E+ T E++ E Sbjct: 236 YHADEILDLSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAE 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HER+L+ EE+L + +L YRV+ GDLG SA + +D E W+ QN YRE++S S C Sbjct: 296 HERLLAWEEEMLAKCELPYRVIDTAAGDLGMSAARKFDCEAWVPTQNAYRELTSTSNCTT 355 Query: 359 FQSRRMNSRYRDPNS----KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 FQ+RR+N R R N K + TLNG+ +A R ++AILE++ N DGSV +P L+ Sbjct: 356 FQARRLNIRERVINDEGVAKGTRAVATLNGT-LATTRWIVAILEHHQNPDGSVNVPKALQ 414 Query: 415 PYMNNLAVIK 424 Y+ L V+ Sbjct: 415 KYLGGLEVLP 424 >gi|302783034|ref|XP_002973290.1| hypothetical protein SELMODRAFT_99251 [Selaginella moellendorffii] gi|300159043|gb|EFJ25664.1| hypothetical protein SELMODRAFT_99251 [Selaginella moellendorffii] Length = 456 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 143/435 (32%), Positives = 224/435 (51%), Gaps = 16/435 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI +RQ +PE + + ++R+ + + ++ +D++ R L ++E +R N S Sbjct: 1 MLDINLVRQEKGGDPERVRESQRRRYASVELVDEVIQIDKEWRKLQHEVEGLRREGNRLS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG N LK + L L EKE V S+L + I N+ + VP+ Sbjct: 61 KEIGLKFR--NKEDPSELKQKKLDLDNSLVSKEKEVESVKSTLDGKLKLIGNLVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 +N +IR+ G+ + H ++ E LG D + T ++G R L GH L Sbjct: 119 DNDEEKNAVIRTWGELRQ-EKNLKNHVDLVECLGFADIKKGTDVAGGRGYYLKGHGVLLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSE 233 +AL F + T + GY+ + P ++ + M Q+ +F ++++ D ++LI TSE Sbjct: 178 QALINFGLAFLT-KRGYSPLQPPYFMKKDVMKECAQLAQFDEELYKLAEKDEKYLIATSE 236 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE- 292 L + + + ++ KSLP+R+ L+ FR EAGS GRDT G+ R HQF K E IT Sbjct: 237 QPLCSYHRGDWMDPKSLPIRYAGLSTCFRKEAGSHGRDTLGIFRVHQFDKIEQFCITSPL 296 Query: 293 -EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 ++S+ HE ML +E+ + L + Y+VV + +G L +A K YDLE W YRE+ Sbjct: 297 GDESWKMHEEMLKNSEDFYQELGIPYQVVVIVSGALNDAAAKKYDLEAWFPASKAYRELV 356 Query: 352 SCSTCGNFQSRRMNSRYR--DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 SCS C ++Q+R ++ RY N + F H LN + A R L ILENY DG + + Sbjct: 357 SCSNCTDYQARNLDIRYGQTTANEQPKHFVHLLNSTLTATQRTLCCILENYQTEDG-LRV 415 Query: 410 PTVLRPYMNNLAVIK 424 P L+PYM L I Sbjct: 416 PKALQPYMAGLEFIP 430 >gi|237715588|ref|ZP_04546069.1| seryl-tRNA synthetase [Bacteroides sp. D1] gi|262408597|ref|ZP_06085143.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|294647519|ref|ZP_06725099.1| serine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294808139|ref|ZP_06766907.1| serine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] gi|298481433|ref|ZP_06999625.1| serine--tRNA ligase [Bacteroides sp. D22] gi|229444297|gb|EEO50088.1| seryl-tRNA synthetase [Bacteroides sp. D1] gi|262353462|gb|EEZ02556.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|292637131|gb|EFF55569.1| serine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294444646|gb|EFG13345.1| serine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] gi|295086896|emb|CBK68419.1| seryl-tRNA synthetase [Bacteroides xylanisolvens XB1A] gi|298272297|gb|EFI13866.1| serine--tRNA ligase [Bacteroides sp. D22] Length = 424 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 149/422 (35%), Positives = 230/422 (54%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N E + L+K+ + + + +++L+ K R +++ A NS S Sbjct: 1 MLTIKQITENTEAVLRGLEKKHFKNAKETIDQVIALNNKRRSTQNELDKNLAEVNSLSRT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG + + + LKE L+ + + ++ ++ IPN+P + VP G Sbjct: 61 IGQLMKEGKKEEAETARARVAELKEGNKELDAAMTQAATDMQNVLYTIPNIPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+E K LP+ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILEEKQLPIMNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR+ K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRNAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MN 418 Sbjct: 418 CG 419 >gi|168700966|ref|ZP_02733243.1| seryl-tRNA synthetase [Gemmata obscuriglobus UQM 2246] Length = 431 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 144/435 (33%), Positives = 228/435 (52%), Gaps = 15/435 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +I N + + + K R + + + +++ ++K + L + + A++N S + Sbjct: 1 MLDAGFICDNADAVKLNCKNRGVSDVAVDRVIAFEQKRKELERTRGETAAKKNEISKKFP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A ALK++ + + +++ +++ E V L + IPN+ P+G Sbjct: 61 TAK---TAEEKQALKDQGAAVDKEVGVIDAELKIVKDDLTLNLLQIPNMTHPAAPVGGED 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ + G+ + ++H ++ EAL L DF+ TK++G +F L A LE AL Sbjct: 118 ANKVVAQ-FGEPRAFDFKPKDHVDLCEALDLADFEAGTKVAGQKFYFLKNEAALLEIALV 176 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD-----DMFCTTDGRWLIPTSEV 234 Q+ + + GYT + P L R E + G G +P+ + LI T+E+ Sbjct: 177 QYAMQTAV-KAGYTPIITPDLARVEVLEGIGFMPRDPNPDTRQVYTVADTDLCLIATAEI 235 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +L ++ I + LP R+ L+ FR+EAG+AGRDTRG+ R HQF K E+ + E Sbjct: 236 TLGGMHRDRIFDEAELPKRYVGLSHCFRTEAGAAGRDTRGLYRVHQFTKVEMFAFCTPET 295 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREIS 351 S HE + + E+I + L L + V+ TGDLG A + YDLE W+ G+ Y EI+ Sbjct: 296 SDAIHEEIRALEEKIFQGLGLCFHVIDTATGDLGGPAYRKYDLEAWMPGRGTGGAYGEIT 355 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S S C +FQ+RR+ RY+ K KF HTLNG+ VA R L+AILENY ADGSV IP Sbjct: 356 STSNCTDFQARRLGIRYKGKGFKGTKFAHTLNGTAVACTRALVAILENYQQADGSVVIPE 415 Query: 412 VLRPYMNNLAVIKKE 426 VLRP++ I+ Sbjct: 416 VLRPWV-GKDKIEPR 429 >gi|330998357|ref|ZP_08322181.1| serine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] gi|329568463|gb|EGG50268.1| serine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] Length = 429 Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats. Identities = 141/422 (33%), Positives = 231/422 (54%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+ + + +L+ D+K R +++ + +AQ Sbjct: 1 MLTLKLINERTEWVIKGLEKKHFPGAKEAIDNVLATDKKRREAQTQLDINLSESKKLAAQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G +++K E + LK+ L++ + L + IPN+P + VP G+ Sbjct: 61 IGALMKQGKKEEAESIKTEVARLKDTNKALQEAMEQAQEELTAQLCAIPNIPYDIVPEGS 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++++ G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVVKMGGMETELPKDALPHWELAKKYNLIDFDLGVKITGAGFPVYRGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY E+ P +V + + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYEEIMPPTVVNEASGYGTGQLPDKEGQMYHCNLDNFYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K E+V I + E S Sbjct: 240 TNIYRDVILDEKDLPVKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVEIVRIDKPEHSE 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML+ E +L++L+L YR++ LC GD+ F++ YD EV+ Q + E+SS S Sbjct: 300 QSHQEMLAHVEGLLQKLELPYRILRLCGGDMSFTSSICYDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + AI+EN +G + +P L PY Sbjct: 360 DTYQANRLKCRYRRAEDKKTELCHTLNGSALALPRIVAAIMENNQTPEG-IRVPKCLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|291276507|ref|YP_003516279.1| seryl-tRNA synthetase [Helicobacter mustelae 12198] gi|290963701|emb|CBG39534.1| seryl-tRNA synthetase [Helicobacter mustelae 12198] Length = 432 Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats. Identities = 179/435 (41%), Positives = 265/435 (60%), Gaps = 21/435 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + + + + L+K+ + + + + ++ + + +E ++A +N NS G Sbjct: 1 MIDVRLLVSDFDAVSQKLQKKKVGAVLLQDLKARAQEYKSAKQGLETLQAEQNKNSKIFG 60 Query: 60 QAIAEGNL---SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +A+ + S V+ LK + K+++ + +L++L+ IPN+P E+ P G Sbjct: 61 SLMAQKDSQNSSEVENLKARLNQQKKEISQAMEVMRMKQEALEELLYVIPNIPDEKTPRG 120 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 EN+ + + + + + +EH+E+ + G +DF+R KL+ +RFSVL G A L R Sbjct: 121 EDERENLELSKILEPRAFDFIPKEHWELAQQNGWIDFERGVKLAKSRFSVLRGMGARLNR 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------------- 223 AL FM+D + + G+ VSAP++V ++ ++GTGQ+PKFA+DMF Sbjct: 181 ALINFMLDCN-QKAGFELVSAPVIVNEKMLFGTGQLPKFAEDMFRIDGNMDPLHVGEEEE 239 Query: 224 -DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 +LI TSE++LTNLY EI++++ LPL TT P FR EAGSAGRDTRGM+RQHQF Sbjct: 240 KQDLYLISTSEITLTNLYYDEILQAEDLPLLLTTQTPCFRKEAGSAGRDTRGMIRQHQFD 299 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 K ELV+IT+ E S ++M+ A IL+ L L +R+V LC GDLGF A T DLEVWL Sbjct: 300 KVELVAITKPEQSDAIQQKMIDTASGILRTLGLPHRLVQLCGGDLGFCASNTVDLEVWLP 359 Query: 343 GQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 GQN YREISS S +FQ+RR RY+ K HTLNGS +AVGR LIAI+ENY N Sbjct: 360 GQNCYREISSISNTRDFQARRAKIRYK--EDKKNHLVHTLNGSSLAVGRTLIAIMENYQN 417 Query: 403 ADGSVTIPTVLRPYM 417 DGS+TIP L+PY+ Sbjct: 418 KDGSITIPEALKPYL 432 >gi|148271694|ref|YP_001221255.1| seryl-tRNA synthetase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166219864|sp|A5CNA2|SYS_CLAM3 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|147829624|emb|CAN00539.1| serS [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 426 Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats. Identities = 152/427 (35%), Positives = 239/427 (55%), Gaps = 10/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D Q +R +P+ + + + R + + ++ D + R + + E +RA +N++ + Sbjct: 1 MIDPQTLRDHPDLVIASQELRGASVEVVDQAVAADSERRRAVTEFEGLRAEQNAHGKLVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + + L E LK ++ ++ E S+L + + IPN+ ++ VP Sbjct: 61 KA----DKADKPRLIAEVQELKARVTAAQERAQEAESALDEAMRRIPNIVIDGVP-AGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ L+R VG KPS R+H EIGE L +D R K+SGARF L G A LE AL Sbjct: 116 DDWALVREVGAKPSFDFAPRDHLEIGEILDAIDMGRGAKVSGARFHYLKGIGARLEIALM 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 F + E G + P LV+ E M GTG + AD+++ D +L TSEV+L Sbjct: 176 NFGLARAL-EAGLVPLITPTLVKPEIMAGTGFLGAHADEVYHLDDDDLYLTGTSEVALAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ P+R+ + +R EAGS G+DTRG++R HQF K E+ S D+ E Sbjct: 235 YHADEILDLAQGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQKLEMFSYVDPADAEAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HER+L+ E +++ L L YRV+ GDLG SA + YD+E W+ Q+ YRE++S S C Sbjct: 295 HERLLAMQERMMQDLGLSYRVIDTAAGDLGSSAARKYDVEAWIPTQDAYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +R+R + + TLNG+ +A R ++AILE + ADGSV +P LRPY+ Sbjct: 355 FQARRLGTRFRGEDGR-TSPVATLNGT-LATTRWIVAILETHQQADGSVRVPEALRPYLG 412 Query: 419 NLAVIKK 425 L V++ Sbjct: 413 GLEVLEP 419 >gi|124485533|ref|YP_001030149.1| seryl-tRNA synthetase [Methanocorpusculum labreanum Z] gi|166222742|sp|A2SRC6|SYS_METLZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|124363074|gb|ABN06882.1| seryl-tRNA synthetase [Methanocorpusculum labreanum Z] Length = 425 Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats. Identities = 162/428 (37%), Positives = 230/428 (53%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R +PE + L+KR + + +L D+ R L K ++RARRN + + Sbjct: 1 MLDIKFVRAHPEVVLADLEKRQDAEKLLWVDTVLEQDKLFRELTVKNNELRARRNQIAKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I EG L E L + + + ++ + +PN+ E VP G Sbjct: 61 INAYKKEGKDP--APLFAEAKALPGLIKDNDDIMEKATEQVRYYLMRLPNILHESVPYGK 118 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 EN++++ VG S + H E+ A G DF+RATK SGA F L G+LA L+ A Sbjct: 119 DDTENVVVKKVGTPRSLDFELKNHGELAAANGWADFERATKTSGAGFYFLKGNLALLDMA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSL 236 L +F +D GYT + P ++ ++ + F M+ D +LI T+E + Sbjct: 179 LQRFALDT-IIAKGYTPIIPPYMMNRKSYEEVTDLGDFEKVMYKIEDDDAYLIATAEHPM 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +Y EI E K LPL+ ++P FR E G+ G D+RG+ R HQF K E E S+ Sbjct: 238 AAMYQDEIFEEKDLPLKMVGISPCFRREIGAHGLDSRGLFRVHQFTKIEQFIYCMPEKSW 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE +L+ AEEI +L L YRVV++CTGD+G A K YD+E W+ N YRE+ SCS C Sbjct: 298 EMHEELLANAEEIFTKLGLPYRVVNICTGDIGTVAAKKYDMEAWMPRDNEYREVVSCSNC 357 Query: 357 GNFQSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +QS R+N R RD + +S ++ HTLN + VA R L ILENY DG V IP VLRP Sbjct: 358 TAYQSVRLNIRVRDAHDFESKQWLHTLNSTAVATSRALRCILENYQTEDGKVEIPKVLRP 417 Query: 416 YMNNLAVI 423 YMN L + Sbjct: 418 YMNGLEYL 425 >gi|57168528|ref|ZP_00367661.1| seryl-tRNA synthetase [Campylobacter coli RM2228] gi|305432945|ref|ZP_07402103.1| serine--tRNA ligase [Campylobacter coli JV20] gi|57020033|gb|EAL56710.1| seryl-tRNA synthetase [Campylobacter coli RM2228] gi|304444099|gb|EFM36754.1| serine--tRNA ligase [Campylobacter coli JV20] Length = 411 Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats. Identities = 173/419 (41%), Positives = 254/419 (60%), Gaps = 10/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ ++ N + + L+ + ++ + + L + +E+ +A +N S ++ Sbjct: 1 MLDLKNLQNNFDEVAKKLQNKKVDENILKNLAELFTNLKKEKASLEEFQAFQNKFSKELA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + ++LK + S K ++ + + + + L+ + IPN+P E VP+G Sbjct: 61 T------VEDKESLKAKLSENKIKINEQNAKVNALENELETIAHAIPNIPDECVPVGEDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ I+ V P +EH ++GE+L +DF R K+S +RF VL A L RAL Sbjct: 115 EENVEIKKVLTPPQFDFTPKEHHDLGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALV 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 +MID + G+ V+ P LV M+GTGQ+PKF DDM+ + +LI TSE+ +TN Sbjct: 175 NYMIDFN-RSRGFEFVNVPFLVNSPTMFGTGQLPKFKDDMYKIEDEDLYLISTSEIPVTN 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LYS EI+ S+SLP++ T + FR EAGSAGRDTRG++RQHQF K ELVSIT+ E S + Sbjct: 234 LYSGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSI 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 M+ CA ++L L L +R + LCTGDLGFSA KT DLEVW+ QN YREISS S C + Sbjct: 294 FNEMVECASDLLSSLGLAHRHLMLCTGDLGFSAAKTIDLEVWIPSQNKYREISSVSNCRD 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP VL+ Y Sbjct: 354 FQARRAKIRYKNEKGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKEGRIQIPDVLKKYF 411 >gi|320532740|ref|ZP_08033527.1| seryl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320135047|gb|EFW27208.1| seryl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 426 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 139/427 (32%), Positives = 220/427 (51%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NPE + + R + + +++ DE R + E++RA + S +G Sbjct: 1 MIDLRALRENPEPFRASQRARGADVDLVDRVIAADETRRQSLAAFENLRAEQKQVSRSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E +++ + K +K E+ ++ + I P Sbjct: 61 KASPEERPAILASAKELAEQVKAAEAASSAAAAELDDLARQFANLIEGAPSGGEEDYVVL 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +H IGE L ++D R K+SGARF L G LE AL Sbjct: 121 RH--EGGEPRDFTAEGFEPADHLAIGEGLDIIDTRRGAKVSGARFYYLKGWGMRLELALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +D HG+T ++ P LV + M GTG + +D+++ D +L TSEV+L Sbjct: 179 TAALDAAV-AHGFTPMTTPTLVTPQVMGGTGFLGAHSDEIYYLPADDLYLTGTSEVALAG 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + P R+ + +R EAG+AG+DTRG++R HQF K E+ S R E++ E Sbjct: 238 YHADEILDLSAGPKRYMGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEEAEAE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L+ EE+L ++L YRV+ GDLG SA + +D E WL Q + E++S S C Sbjct: 298 HARLLAMEEEMLALVELPYRVIDTAAGDLGSSAARKFDCEAWLPTQQRWMEVTSTSNCTT 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR+ R R S TLNG+ +A R ++AILEN+ ADGSV +P LRPY+ Sbjct: 358 YQARRLAVRERREGGTSP--VATLNGT-LATTRWMVAILENHQQADGSVRVPAGLRPYLG 414 Query: 419 NLAVIKK 425 L VI+ Sbjct: 415 GLEVIEP 421 >gi|326772773|ref|ZP_08232057.1| serine--tRNA ligase [Actinomyces viscosus C505] gi|326637405|gb|EGE38307.1| serine--tRNA ligase [Actinomyces viscosus C505] Length = 426 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 141/427 (33%), Positives = 220/427 (51%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NPE + + R + + +++ DE R + E++RA + S +G Sbjct: 1 MIDLRALRENPEPFRASQRARGADVDLVDRVIAADETRRQALAAFENLRAEQKQVSRSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E +++ K +K E+ ++ + I P Sbjct: 61 KASPEERPAILANAKELAEQVKAAEAASSTAAAELDDLARQFANLIEGAPSGGEEDYVVL 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +H IGE L ++D R K+SGARF L G LE AL Sbjct: 121 RH--EGGRPRDFAAEGFEPADHLAIGEGLDIIDTRRGAKVSGARFYYLKGWGMRLELALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +D HG+T ++ P LV + M GTG + +D+++ D +L TSEV+L Sbjct: 179 TAALDAAV-AHGFTPMTTPTLVTPQVMGGTGFLGAHSDEIYYLPADDLYLTGTSEVALAG 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + P R+ + +R EAG+AG+DTRG++R HQF K E+ S R ED+ E Sbjct: 238 YHADEILDLSAGPKRYMGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEDAEAE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L+ EE+L ++L YRV+ GDLG SA + +D E WL Q + E++S S C Sbjct: 298 HARLLAMEEEMLALVELPYRVIDTAAGDLGSSAARKFDCEAWLPTQQRWMEVTSTSNCTT 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR+ R R S TLNG+ +A R ++AILEN+ ADGSV +PT LRPY+ Sbjct: 358 YQARRLAVRERREGGTSP--VATLNGT-LATTRWMVAILENHQQADGSVRVPTGLRPYLG 414 Query: 419 NLAVIKK 425 L VI+ Sbjct: 415 GLEVIEP 421 >gi|225350994|ref|ZP_03742017.1| hypothetical protein BIFPSEUDO_02575 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158450|gb|EEG71692.1| hypothetical protein BIFPSEUDO_02575 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 464 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 140/431 (32%), Positives = 234/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L DE R +K+ E RA++ +IG Sbjct: 37 MLDIQFIREHADVVKESQRKRGESVELVDEVLRSDEVRRSSLKEFEAARAQQ----KEIG 92 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A L ET L +++ + + + NV E P G Sbjct: 93 KKVAAAPADEKAKLIAETKELSQKVSEYKAAADAAAEEYTTAMWKLSNVVEPEAPEGGED 152 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D +R K+ G+RF L G +A ++ A Sbjct: 153 DYVVVKKVGQIRDFAAEGFEPKDHLTLGRGVAGIDMERGVKVGGSRFYFLRGQVARMQIA 212 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 213 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDEQYLVGTSEVA 271 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ PLR+ + +R EAG+AG+DT G++R HQF K E+ T++EDS Sbjct: 272 LAGMHENEILDLSDGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYTKQEDS 331 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE +L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 332 YKEHEHLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 391 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AILEN+ DGS+ IP +R Sbjct: 392 CTEYQARRLNIRERMEDGG-TRAVSTLNGT-LATTRWLVAILENHQQKDGSIVIPQAMRA 449 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 450 YMGGKEVIEPT 460 >gi|23466184|ref|NP_696787.1| seryl-tRNA synthetase [Bifidobacterium longum NCC2705] gi|227546530|ref|ZP_03976579.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621528|ref|ZP_04664559.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133927|ref|YP_004001266.1| sers [Bifidobacterium longum subsp. longum BBMN68] gi|322689877|ref|YP_004209611.1| seryl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] gi|322691817|ref|YP_004221387.1| seryl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|30173167|sp|Q8G3W7|SYS_BIFLO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|23326924|gb|AAN25423.1| seryl-tRNA synthetase [Bifidobacterium longum NCC2705] gi|227212847|gb|EEI80726.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239515403|gb|EEQ55270.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516425|emb|CBK70041.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. longum F8] gi|311773221|gb|ADQ02709.1| SerS [Bifidobacterium longum subsp. longum BBMN68] gi|320456673|dbj|BAJ67295.1| seryl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320461213|dbj|BAJ71833.1| seryl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] Length = 428 Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 137/431 (31%), Positives = 234/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +LS D R +K E+ RA++ +IG Sbjct: 1 MLDIQFIREHTDIVKESQRKRGESVELVDEVLSSDTARREALKAFEEARAQQ----KEIG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A L ET L +++ + + + + N+ E P G Sbjct: 57 KKVASAPADEKAKLIAETKELSQKVSEYKSKADSAAEEYTTAMWKLSNIVEPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D R K+ G+RF L G +A ++ A Sbjct: 117 DYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ + PLR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 236 LAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE +L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 YKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AI+EN+ DGS+ IP +R Sbjct: 356 CTEYQARRLNIRERMEDGG-TRPVSTLNGT-LATTRWLVAIMENHQQKDGSIEIPKAMRA 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|312890113|ref|ZP_07749656.1| seryl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] gi|311297390|gb|EFQ74516.1| seryl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] Length = 423 Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 145/419 (34%), Positives = 230/419 (54%), Gaps = 6/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + +IR+N +++ L ++ + + +L LDE+ R ++ + A N+ + QI Sbjct: 1 MLQVSYIRENRDNVLERLAVKNFKQPELVDEVLKLDEQRRQTQNTLDGVSAEANAAAKQI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ + + +K++++ KE + L ++ + L++ I +PN+P VP G + Sbjct: 61 GELMRSSKKEEAETIKSKSNIWKEDIKKLSEQLSGIEQELQQKIVLLPNLPHSSVPKGIT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN ++ G KP + H+E+ L+DF+ K++GA F V G A L+RAL Sbjct: 121 PEENEIVLEHGDKPQLPANALPHWELAAKYNLIDFELGVKITGAGFPVYKGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 F +D + GY E PLLV + + +GTGQ+P M+ D +LIPT+EV +T Sbjct: 181 IAFFLDE-AEKAGYDERMLPLLVNEASGFGTGQLPDKEGQMYHVGVDNLYLIPTAEVPIT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY I+++ LP++ FR EAGS G RG+ R HQF K ELV + + S+ Sbjct: 240 NLYRDVILKADELPVKNCGYTACFRREAGSYGAHVRGLNRLHQFDKVELVQVVNPDQSYE 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E+M + +L++L L YRV+ LC GD+ F++ TYD+E W A Q + E+SS S Sbjct: 300 VLEQMSLHVQGLLQKLGLPYRVLRLCGGDMSFTSALTYDMETWSAAQQRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQS R+ R+R+ K + HTLNGS +A+ R + +LEN +G + IP VL PY Sbjct: 360 TFQSNRLKLRFRNAEGK-TQLAHTLNGSALALPRIVATLLENNQTENG-IKIPEVLVPY 416 >gi|256824062|ref|YP_003148022.1| seryl-tRNA synthetase [Kytococcus sedentarius DSM 20547] gi|256687455|gb|ACV05257.1| seryl-tRNA synthetase [Kytococcus sedentarius DSM 20547] Length = 426 Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 147/429 (34%), Positives = 238/429 (55%), Gaps = 10/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ +R NP+ + + + R + + +L ++ ++R + E +RA + + I Sbjct: 1 MIDIRELRANPDAVRASQRTRGEDESVVDRVLEVEARSRSKQAEFESLRAEQKTFGKTIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA A+ L + + ++ LE E E+ + +L+ I NV +VP G Sbjct: 61 QAPADQKAELA----AQGKEMAARVKALEAEAGELAAEADRLLRTIGNVVKPQVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L + + R+H E+GE LG +D +R K+SG+RF LTG A LE A Sbjct: 117 DFEVLEEVGTPRDFAAEGFEPRDHLELGELLGAIDMERGAKVSGSRFYFLTGIGARLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 + +DL ++G+T + P LV + M G G + AD+++ D ++L+ TSEV+L Sbjct: 177 MMNMALDLAL-KNGFTPMITPSLVNPDVMAGAGFLDSHADEVYHLEADDQYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 ++ EI++ P R+ + +R EAGS G+DTRG++R HQF K E+ E++ Sbjct: 236 AGYHADEILDLADGPRRYAGWSTCYRREAGSHGKDTRGIIRVHQFTKLEMFIYCTAEEAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 TEHER+L+ +E+L ++L YRV+ + GDLG A + +D E W+ Q +RE++S S C Sbjct: 296 TEHERLLALEKEMLGAMELPYRVIDVAAGDLGGPAARKFDCEAWVPTQGKHRELTSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR+ +R R K + TLNG+ +A R L+AILEN+ DGSV +P LRPY Sbjct: 356 TTFQARRLRTRERVAGGKGTQVVATLNGT-LATTRWLVAILENHQLPDGSVRVPEALRPY 414 Query: 417 MNNLAVIKK 425 + L VI+ Sbjct: 415 LGGLEVIEP 423 >gi|118469581|ref|YP_890626.1| seryl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] gi|166222747|sp|A0R638|SYS_MYCS2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|118170868|gb|ABK71764.1| seryl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] Length = 417 Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 240/427 (56%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + + R +P + +L+ D R + +++RA + + S +G Sbjct: 1 MIDLRLLRENPDIVRASQRARGEDPALVDALLAADTARRSAVSAADNLRAEQKAASKLVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + + L L EQ+ E + E + I NV E VP G Sbjct: 61 KASPDERPA----LLQRAKDLAEQVKAAEAAQAEAEQAFTAAHMAISNVIFEGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L +P AI ++H E+GE+LGL+D +R K+SG+RF LTG A L+ L Sbjct: 117 DFVVLDT--VGEPRAIENPKDHLELGESLGLIDMERGAKVSGSRFYFLTGAGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q + ++G+T + P+LVR E M GTG + AD+++ D +L+ TSEV L Sbjct: 175 QLATQVAV-QNGFTLMIPPVLVRPEVMRGTGFLGAHADEVYRLEADDMYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + P R+ + FR EAGS G+DTRG++R HQF K E + ED+ E Sbjct: 234 YHADEILDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L E+L +++ YRV+ + GDLG SA + YD E W+ Q YRE++S S C Sbjct: 294 HQRLLGWQREMLAAIEVPYRVIDVAAGDLGSSAARKYDCEAWVPTQQTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+++RYRD N K + TLNG+ +A R L+AILEN+ DGSV +P L PY+ Sbjct: 354 FQARRLSTRYRDDNGK-PQIAATLNGT-LATTRWLVAILENHQQPDGSVRVPAALVPYVR 411 Query: 419 NLAVIKK 425 V++ Sbjct: 412 -TEVLEP 417 >gi|256786543|ref|ZP_05524974.1| seryl-tRNA synthetase [Streptomyces lividans TK24] Length = 412 Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 146/415 (35%), Positives = 223/415 (53%), Gaps = 11/415 (2%) Query: 15 DIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 + + R + + +LS DE+ R + +++RA + IG+A + L Sbjct: 2 RASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKGLGKLIGKAAGDEKAE----L 57 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI--LIRSVGKK 131 LK + + E + ++L+ + N+ +VP+G + + Sbjct: 58 LKRAEQLKTDVKAADAERDAADAETQELLQRLGNLVHPDVPVGGEEDFVTLETHGTHRDF 117 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + R+H E+G+ LG +D +R K+SG+RF LTG A LE AL I + G Sbjct: 118 AAEGFEPRDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNAAIAQ-ATAAG 176 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSL 250 +T + P LVR ++M GTG + + A D++ D +L+ TSEV L + EI++ L Sbjct: 177 FTPMLTPALVRPQSMAGTGFLGQAAQDVYHLDKDDLYLVGTSEVPLAAYHMDEILDGDRL 236 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 PLR+ +P FR EAGS G+DTRG+ R HQF K E+ S EDS EH+R+L ++ L Sbjct: 237 PLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVLPEDSQAEHQRLLEWEKQWL 296 Query: 311 KRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD 370 L+L +RV+ + + DLG SA + YD E W+ Q YRE++S S C FQSRR++ R R Sbjct: 297 TSLELPFRVIDVASADLGSSAARKYDCEAWIPTQGKYRELTSTSDCTEFQSRRLSIRVR- 355 Query: 371 PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 K ++ TLNG+ AV R ++AILEN+ ADGSV +P VLRPY+ V++ Sbjct: 356 -EGKKVRPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPYLGGREVLEP 409 >gi|325961721|ref|YP_004239627.1| seryl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] gi|323467808|gb|ADX71493.1| seryl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] Length = 427 Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 146/429 (34%), Positives = 234/429 (54%), Gaps = 12/429 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++ + +NP+ + + R + + I+S D R + + E++RA +N+ ++ Q Sbjct: 3 IDVKDLSENPDKYRASQRARRADESVVDAIISADSARRAALIRFENLRAEQNAFGKKVAQ 62 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E L + E + ++L+ IPN+ + VP G + Sbjct: 63 AKGDEKKA----LLAEVKELANSVKAASAEADAAQTKQEELLRTIPNLIEDGVPEGGEDD 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ + ++H EIGE +G +D +R K+SGARF L G A LE AL Q Sbjct: 119 YVVVKTVGTPREFPDFEPKDHLEIGELIGAIDMERGAKVSGARFYFLRGVGARLEMALLQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 +D E G+ + P LVR E M GTG K +++ D +L+ TSEV+L Sbjct: 179 MAMD-QAIEAGFIPMITPTLVRPETMQGTGFDVKHDAEIYRLAEDDLYLVGTSEVALAGY 237 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI++ + P+R+ + +R EAGS G+DTRG++R HQF K E+ T E++ EH Sbjct: 238 HADEILDFSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAEH 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +R+L+ EE+L + +L YRV+ GDLG SA + YD E W+ Q YRE++S S C F Sbjct: 298 QRLLAWEEEMLAKCELPYRVIDTAAGDLGMSAARKYDCEAWVPTQGAYRELTSTSNCTTF 357 Query: 360 QSRRMNSRYRDPN----SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 Q+RR+N R R N +K + TLNG+ +A R ++A+LE++ NADGSV +P L+ Sbjct: 358 QARRLNIRERAVNPEGVAKGTRAVATLNGT-LATTRWIVALLEHHQNADGSVNVPKALQK 416 Query: 416 YMNNLAVIK 424 Y+ L V+ Sbjct: 417 YLGGLEVLP 425 >gi|224283763|ref|ZP_03647085.1| seryl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|311064846|ref|YP_003971572.1| sers seryl-tRNA synthetase [Bifidobacterium bifidum PRL2010] gi|313140917|ref|ZP_07803110.1| seryl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|310867166|gb|ADP36535.1| SerS Seryl-tRNA synthetase [Bifidobacterium bifidum PRL2010] gi|313133427|gb|EFR51044.1| seryl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] Length = 428 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 142/431 (32%), Positives = 236/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L DE R +K+ E+ RA++ +IG Sbjct: 1 MLDIQFIREHADIVKESQRKRGESVELVDEVLRSDETRRSALKEFEEARAQQ----KEIG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A AL +T L ++ + + + NV E P G Sbjct: 57 KKVAAAPADEKAALIAQTKELSAKVAEYKAAADAAAGEYTTAMWKLSNVVEPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + ++H +G + +D R K+ G+RF L G +A ++ A Sbjct: 117 DYVVVKKVGQPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGAVARMQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D +HG+ P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEKHGFVLAITPTLVRPEVMAGTGFLNSHADEIYRLREPDEQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ + PLR+ + +R EAG+AG+DT G++R HQF K E+ T++EDS Sbjct: 236 LAGMHENEILDLSNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYTKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EH+ +LS EE+L ++++ YRV+ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 YKEHQHLLSMEEEMLAKVEVPYRVIDTAAGDLGSSAARKFDTEAWIPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R+ + S + TLNG+ +A R L+AILEN+ DGS+ IP +RP Sbjct: 356 CTEYQARRLNIRERNEDG-STRAVSTLNGT-LATTRWLVAILENHQQKDGSIEIPQAMRP 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|161986627|ref|YP_249893.2| seryl-tRNA synthetase [Corynebacterium jeikeium K411] gi|260578616|ref|ZP_05846525.1| serine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] gi|258603244|gb|EEW16512.1| serine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] Length = 424 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 152/429 (35%), Positives = 241/429 (56%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R NP+ + + R +P + +L D + R I + RA + + S ++G Sbjct: 1 MIDLKFLRDNPDVARESQRTRGEDPALIDQLLEADSQRREAISAADAARADQKAFSKEMG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + + AL+ E E + LE+ + ++ L I N+ E P Sbjct: 61 QKMRSASDEEKLALREEGKQKAEAVKKLEEAQSSAEQAVHDLQMQISNIVEEGAP-AGGE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + + VG+ P ++H E+GE+LGL+D R TK+SGARF LTG A L+ + Sbjct: 120 EDFVTLDVVGEPPQFDFEPKDHLELGESLGLIDMKRGTKVSGARFYFLTGDGALLQLGML 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q EHG+ + P+LVR E M GTG + AD+++ D +L+ TSEV+L Sbjct: 180 QLAAQ-KAVEHGFKLMIPPVLVRPEIMSGTGFLGAHADEIYHLEEDDMYLVGTSEVALAG 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EII+ + PLR+ + FR EAGS G+DTRG++R HQF K E+ + E++ Sbjct: 239 YHSEEIIDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVYCKPEEATEV 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ +L+ E+L +++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 299 HQELLAMEREMLGAIEVPYRVIDVAGGDLGSSAARKFDTEAWVPTQQTYRELTSTSNCTT 358 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ RR+ +RYRD + K+ + TLNG+ +A R L+AILEN+ ADGSV +P LRP++ Sbjct: 359 FQGRRLKTRYRDADGKA-QTAATLNGT-LATTRWLVAILENHQQADGSVVVPKALRPFV- 415 Query: 419 NLAVIKKEH 427 ++K + Sbjct: 416 GKDILKPSN 424 >gi|306823515|ref|ZP_07456890.1| serine--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|309802859|ref|ZP_07696960.1| serine--tRNA ligase [Bifidobacterium dentium JCVIHMP022] gi|304553222|gb|EFM41134.1| serine--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|308220326|gb|EFO76637.1| serine--tRNA ligase [Bifidobacterium dentium JCVIHMP022] Length = 428 Score = 352 bits (903), Expect = 7e-95, Method: Composition-based stats. Identities = 138/431 (32%), Positives = 233/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L DE R +K+ E RA++ +IG Sbjct: 1 MLDIQFIREHADVVKESQRKRGESVELVDEVLRSDEVRRSSLKEFEAARAQQ----KEIG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A L ET L +++ + + + N+ E P G Sbjct: 57 KKVAAAPADEKAKLIAETKELSQKVSEYKAAADAAAEEYTTAMWKLSNIVEPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D +R K+ G+RF L G +A ++ A Sbjct: 117 DYVVVKKVGQIRDFAAEGFEPKDHLTLGRGVAGIDMERGVKVGGSRFYFLRGQVARMQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDEQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ PLR+ + +R EAG+AG+DT G++R HQF K E+ T++EDS Sbjct: 236 LAGMHENEILDLSDGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYTKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE +L+ + +L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 YKEHEHLLAMEQAMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AILEN+ DGS+ IP +R Sbjct: 356 CTEYQARRLNIRERMEDGN-TRAVSTLNGT-LATTRWLVAILENHQQKDGSIVIPQAMRA 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|294673444|ref|YP_003574060.1| serine--tRNA ligase [Prevotella ruminicola 23] gi|294473781|gb|ADE83170.1| serine--tRNA ligase [Prevotella ruminicola 23] Length = 439 Score = 352 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 145/436 (33%), Positives = 228/436 (52%), Gaps = 20/436 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+ + + +L++D++ R ++++ + S Q Sbjct: 1 MLTLKLINEETERVIRGLEKKHFAGAKEAIDNVLAVDKQRREAQQELDKCLNEQKQLSGQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ + EG + +K + + LKE+ L++ + + L+ IPN+P +EVP G Sbjct: 61 IGRLMKEGKKDEAEQVKAQVAQLKEKSKELDETMAKAQEEMTTLLCQIPNIPYDEVPEGK 120 Query: 118 --------------SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 + + I H+E+ + L+DFD K++GA Sbjct: 121 VAEDNHVVKSNLKECTANDTVGNWDVNPSLGIANPLPHWELAKKYNLIDFDLGVKITGAG 180 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCT 222 F V G A L+RAL F +D + GYTE+ P +V + YGTGQ+P M C Sbjct: 181 FPVYIGKGARLQRALINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCE 239 Query: 223 TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 D +LIPT+EV +TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F Sbjct: 240 VDDFYLIPTAEVPVTNIYRDVILDEKDLPIKNCAYTECFRREAGSYGKDVRGLNRLHEFS 299 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 K E+V I + E S H+ ML E +LK+L+L YR++ LC GD F++ YD EV+ Sbjct: 300 KIEIVRIDKPEHSKESHKEMLEHVEGLLKKLELPYRILLLCGGDQSFTSAICYDFEVYSE 359 Query: 343 GQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 Q + E+SS S +Q+ R+ RYR+ +K + HTLNGS +A+ R + A+LEN Sbjct: 360 AQGRWLEVSSVSNFDTYQANRLKCRYRNSETKKTELCHTLNGSALALPRIVAALLENNQT 419 Query: 403 ADGSVTIPTVLRPYMN 418 +G + IP L PYM Sbjct: 420 ENG-IKIPAALVPYMG 434 >gi|154486801|ref|ZP_02028208.1| hypothetical protein BIFADO_00627 [Bifidobacterium adolescentis L2-32] gi|154084664|gb|EDN83709.1| hypothetical protein BIFADO_00627 [Bifidobacterium adolescentis L2-32] Length = 428 Score = 352 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 139/431 (32%), Positives = 234/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L DE R +K+ E RA++ +IG Sbjct: 1 MLDIQFIREHADVVKESQRKRGESVELVDEVLRSDEVRRSSLKEFEAARAQQ----KEIG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A L T L +++ + + + N+ E P G Sbjct: 57 KKVAAAPADEKAKLIAATKELSQKVSEYKAAADAAAEEYTTAMWKLSNIVEPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + S ++H +G + +D +R K+ G+RF L G +A ++ A Sbjct: 117 DYVVVKKVGQIRDFASEGFEPKDHLTLGRGVAGIDMERGVKVGGSRFYFLRGQVARMQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI+ ++ PLR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 236 LAGMHENEILNLENGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE +L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 YKEHEHLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AILEN+ DGS+ IP +RP Sbjct: 356 CTEYQARRLNIRERMEDGN-TRAVSTLNGT-LATTRWLVAILENHQQKDGSIEIPKAMRP 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|291457255|ref|ZP_06596645.1| serine--tRNA ligase [Bifidobacterium breve DSM 20213] gi|291381090|gb|EFE88608.1| serine--tRNA ligase [Bifidobacterium breve DSM 20213] Length = 452 Score = 352 bits (902), Expect = 8e-95, Method: Composition-based stats. Identities = 138/431 (32%), Positives = 235/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +LS D R +K E+ RA++ +IG Sbjct: 25 MLDIQFIREHTDIVKESQRKRGESVELVDEVLSSDTVRRESLKAFEEARAQQ----KEIG 80 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A L ET L +++ + + + + N+ E P G Sbjct: 81 KKVASAPADEKAKLIAETKELSQKVAEFKSKADAAAEEYTTAMWKLSNIVEPEAPEGGED 140 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D R K+ G+RF L G +A ++ A Sbjct: 141 DYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQIA 200 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 201 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 259 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ + PLR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 260 LAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDS 319 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE +L+ +E+L ++++ YR++ GDLG SA + +D E W+ QN YRE++S S Sbjct: 320 YKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQNRYRELTSTSN 379 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AI+EN+ DGS+ IP +R Sbjct: 380 CTEYQARRLNIRERMEDGG-TRPVSTLNGT-LATTRWLVAIMENHQQKDGSIEIPKAMRA 437 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 438 YMGGKEVIEPT 448 >gi|313886826|ref|ZP_07820531.1| serine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] gi|332299470|ref|YP_004441391.1| seryl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] gi|312923716|gb|EFR34520.1| serine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] gi|332176533|gb|AEE12223.1| seryl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 424 Score = 352 bits (902), Expect = 8e-95, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 242/427 (56%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I+ I +P+ + L +H + I++ D+ R K +D A++ S I Sbjct: 1 MLTIKQILDDPQGVIERLAVKHFPAEEPIAAIIAQDKLRRDAQHKKDDSLAQQKVLSRSI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ + G + LK E LKE E+ + ++++L+ +PN+P +VP GTS Sbjct: 61 GEKMKAGAREEAEQLKAEVQALKEISKEAEETMRQAEETMRQLLLSVPNLPHPDVPHGTS 120 Query: 119 ANENILIRSVGKKPSAIHLSR-EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N+ + + GK P + ++ H+E+ + L+DF+ K++GA F V G A L+RA Sbjct: 121 AEDNLCVATGGKMPHLENTAKLPHWELAKQYDLIDFELGVKITGAGFPVYKGRGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D T G+ EV P++V + + GTGQ+P M+ D +LIPT+EV + Sbjct: 181 LINFFLDRAT-AAGFQEVEPPIMVNEASGIGTGQLPDKEGQMYHAQLDNLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ I+E+ LP+ T P FR EAGS G+D RG+ R HQF K E+VSI R + S+ Sbjct: 240 TNIFRDVILEADQLPVCCTAYTPCFRREAGSYGKDVRGLNRLHQFDKVEIVSIDRPDHSW 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ++M++ + +++ L+L YR++ LC GDL F++ TYD EV+ A Q + E+SS S Sbjct: 300 QQLDKMIAHVKSLVEELELPYRILRLCGGDLSFTSAMTYDFEVFSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RYRDP + HTLNGS +A+ R + A+LEN +G + IP LRPY Sbjct: 360 ESYQANRLMCRYRDPEEG-ITLCHTLNGSALALPRIVAALLENNQTPEG-IIIPEALRPY 417 Query: 417 MNNLAVI 423 I Sbjct: 418 T-GFDKI 423 >gi|119025387|ref|YP_909232.1| seryl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] gi|166200603|sp|A1A0B7|SYS_BIFAA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|118764971|dbj|BAF39150.1| seryl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] Length = 428 Score = 352 bits (902), Expect = 8e-95, Method: Composition-based stats. Identities = 138/431 (32%), Positives = 234/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L DE R +K+ E RA++ +IG Sbjct: 1 MLDIQFIREHADVVKESQRKRGESVELVDEVLRSDEVRRSSLKEFEAARAQQ----KEIG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A L T L +++ + + + N+ E P G Sbjct: 57 KKVAAAPADEKAKLIAATKELSQKVSEYKAAADAAAEEYTTAMWKLSNIVEPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D +R K+ G+RF L G +A ++ A Sbjct: 117 DYVVVKKVGQIRDFAAEGFEPKDHLTLGRGVAGIDMERGVKVGGSRFYFLRGQVARMQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI+ ++ PLR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 236 LAGMHENEILNLENGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE +L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 YKEHEHLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AILEN+ DGS+ IP +RP Sbjct: 356 CTEYQARRLNIRERMEDGN-TRAVSTLNGT-LATTRWLVAILENHQQKDGSIEIPKAMRP 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|329947940|ref|ZP_08294841.1| serine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] gi|328523079|gb|EGF50180.1| serine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] Length = 426 Score = 352 bits (902), Expect = 9e-95, Method: Composition-based stats. Identities = 137/427 (32%), Positives = 222/427 (51%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NPE + + R + + +++ DE R + E++RA + + S +G Sbjct: 1 MIDLRALRENPEPFRASQRARGADVDLVDRVIAADETRRQALAAFENLRAEQKAVSRSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + +++ + K +K ++ + ++ + I P Sbjct: 61 KASPQERPAILASAKELAEQVKAAEAASSAAAADLDALARQFANLIEGAPSGGEEDYVVL 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +H IGE L ++D R K+SGARF L G LE AL Sbjct: 121 RH--EGGEPRDFAAEGFEPADHLAIGEGLDIIDTRRGAKVSGARFYYLKGWGMRLELALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 ++ HG+T ++ P LV + M GTG + +D+++ D +L TSEV+L Sbjct: 179 TAALEAAV-AHGFTPMTTPTLVTPQVMGGTGFLGAHSDEIYYLPADDLYLTGTSEVALAG 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + P R+ + +R EAG+AG+DTRG++R HQF K E+ S R ED+ E Sbjct: 238 YHADEILDLSAGPRRYMGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEDAEAE 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L+ EE+L ++L YRV+ GDLG SA + +D E WL Q + E++S S C Sbjct: 298 HARLLAMEEEMLALVELPYRVIDTAAGDLGSSAARKFDCEAWLPTQQRWMEVTSTSNCTT 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR+ R R S TLNG+ +A R ++AILEN+ ADGSV +P LRPY+ Sbjct: 358 YQARRLAVRERREGGTSP--VATLNGT-LATTRWMVAILENHQQADGSVRVPAGLRPYLG 414 Query: 419 NLAVIKK 425 L VI+ Sbjct: 415 GLEVIEP 421 >gi|300120402|emb|CBK19956.2| unnamed protein product [Blastocystis hominis] gi|300121988|emb|CBK22562.2| unnamed protein product [Blastocystis hominis] gi|300122888|emb|CBK23895.2| unnamed protein product [Blastocystis hominis] Length = 453 Score = 352 bits (902), Expect = 9e-95, Method: Composition-based stats. Identities = 130/436 (29%), Positives = 222/436 (50%), Gaps = 15/436 (3%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +DI +R NP+ + + K R + + +++LD+K R L+ I++++ + S Sbjct: 3 IDINLLRVSRGGNPDLVRKSQKDRFASVELVDEVIALDDKWRALVGSIDNMKKEKRILST 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 IG+A EG + +A + + ++ EKE +V + I N+ + I Sbjct: 63 AIGKARKEGKDAAEEA--AKVKEVTAKIEETEKEVEKVRVERDAKLGKIGNILSDTCIID 120 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + + N ++ G H E+ L + +R T+++G R L G L + Sbjct: 121 NNEDNNGVVWKWGTPRPMTKDMYCHHELLWMLDGYEPERGTRVAGHRGYFLKGSAVLLNQ 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTS 232 A+ + + +T + G+T + P + + M G Q+ F + ++ + ++LI TS Sbjct: 181 AIIMYAMQWNT-KRGFTLLQTPYFMNRDVMAGVAQLEDFDESLYHVEGEEGEEKYLIATS 239 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E + + E ++ K LPL++T + +FR EAG+ G+DT G+ R HQF K E I++ Sbjct: 240 EQPICGYHMGEWLDEKELPLKYTGFSTNFRKEAGAHGKDTWGIFRVHQFDKVEQFVISKP 299 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S+ HE M+ + E + L+L YRVV++ +G L +A K YDLE W G YRE+ S Sbjct: 300 EESWAMHEYMIQNSREFYESLNLPYRVVNIVSGALNNAAAKKYDLEGWFPGYEAYRELVS 359 Query: 353 CSTCGNFQSRRMNSRYRDPNSKS--LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 CS C ++QSR M R K+ K+ H LN + A+ R L ILENY ++G V IP Sbjct: 360 CSNCTDYQSRAMEIRCGATKKKNEEKKYVHMLNSTLCALTRTLCCILENYQTSEG-VEIP 418 Query: 411 TVLRPYMNNLAVIKKE 426 VL+P+M + + + Sbjct: 419 EVLQPWMGGIKFLPFK 434 >gi|194246533|ref|YP_002004172.1| Seryl-tRNA synthetase [Candidatus Phytoplasma mali] gi|254783041|sp|B3R0F5|SYS_PHYMT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|193806890|emb|CAP18319.1| Seryl-tRNA synthetase [Candidatus Phytoplasma mali] Length = 423 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 178/420 (42%), Positives = 260/420 (61%), Gaps = 6/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML++++I +N E + L R + +L L+ K + LI IE +R ++N S +I Sbjct: 1 MLNLKFIIENIEKVIEKLNTRTGDFSYLNKLLVLNIKKKKLIFNIETLRYQQNKISKEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N + + + + LK ++ +LE + + S + ++++ IPN+P E V + + Sbjct: 61 ILKQ--NKTNTENIFERSIFLKNEIHVLENDFKKTDSEISEILNNIPNLPHESVILLSKD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N I + ++H +G L ++DFDRA+K++G+RF V G A LER+L Sbjct: 119 NNKINFKKYLSPKKFNFNIKDHVTLGRNLNILDFDRASKITGSRFIVYKGLGARLERSLI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLT 237 QFM+DLH SE GY E+ P +V D +M+ TGQ+PKF +D + ++ +L PT EV Sbjct: 179 QFMMDLH-SEKGYIEIIPPFIVNDISMFSTGQLPKFKNDSYRLENSNNWYLNPTGEVPAI 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+ +E++ K+LPL + FR EAG+AG+DTRG+LRQHQF K EL+ T +DS+ Sbjct: 238 NLHRNEVLSQKNLPLNYVVFTTCFRQEAGTAGKDTRGILRQHQFNKVELIKFTEPQDSYL 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E ML AE +L++L+L YRV+ L + +LGFSA KTYD+EVWL G N YREISS S Sbjct: 298 ELENMLQDAESVLQKLELPYRVIMLPSHELGFSASKTYDIEVWLPGSNNYREISSISNTE 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQS R N ++ N K+ HTLNGSG+A+GR LIAILENY N DG++T+P VLR YM Sbjct: 358 SFQSLRANIKFYSKNKGKNKYVHTLNGSGLAIGRTLIAILENYQNKDGTITVPKVLRSYM 417 >gi|39938569|ref|NP_950335.1| seryl-tRNA synthetase [Onion yellows phytoplasma OY-M] gi|67461791|sp|Q6YRD2|SYS_ONYPE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|39721678|dbj|BAD04168.1| seryl-tRNA synthetase [Onion yellows phytoplasma OY-M] Length = 424 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 168/428 (39%), Positives = 266/428 (62%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD+ ++ QN + L+KR + L ++ + L+ +I+D+R+++N ++ ++ Sbjct: 1 MLDLNFVVQNLPSVIAKLEKRQQNFAYLNKLPLLAQQRKSLLLEIQDLRSQKNQSAKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + + +T+ L++ L LE++ + ++S PN+P + +PIGT+ Sbjct: 61 Q--KANAKEDITLVLQDTNFLRDDLQKLEQKLKLKEQEIFDILSITPNLPHDSLPIGTND 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N + G+ + ++H + E L ++DF RA+K+SG+ F V G A LERAL Sbjct: 119 KDNKELYCAGQIRTFAFTPKDHVYLAEKLDILDFKRASKISGSGFVVCKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSL 236 QFM+DLH ++ GY E+ P ++ +++M+ TGQ+PKF D+++ + +L PT+EV Sbjct: 179 QFMMDLH-NKKGYQEIIPPYIINEKSMFATGQLPKFEDEVYKLYNSKNNWYLNPTAEVPT 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 NL+ EI + +LP+++ +FR EAGSAG+DTRG+ RQHQF K EL+ ++S+ Sbjct: 238 INLHREEIFKPDTLPIKYVAYTTAFRQEAGSAGKDTRGIFRQHQFNKVELIQFCHPQNSY 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++ML +EE+LK L L YRVV L TGDLGFS KTYDLEV+L N YREI S S Sbjct: 298 ECLDQMLKDSEEVLKLLKLPYRVVLLSTGDLGFSMAKTYDLEVFLPSYNCYREIGSISNS 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N + ++P + ++ H LNGSG+AVGR +IAILENY N DG++T+P VL+PY Sbjct: 358 CDFQARRANIKMKNPANNKNEYVHILNGSGLAVGRTVIAILENYQNQDGTITVPEVLQPY 417 Query: 417 MNNLAVIK 424 + +IK Sbjct: 418 L-GTDIIK 424 >gi|329962119|ref|ZP_08300130.1| serine--tRNA ligase [Bacteroides fluxus YIT 12057] gi|328530767|gb|EGF57625.1| serine--tRNA ligase [Bacteroides fluxus YIT 12057] Length = 424 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 151/422 (35%), Positives = 228/422 (54%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I N + + L+K+ + + E +L + K R ++ + N+ S Sbjct: 1 MLTIKQITDNTDAVLRGLEKKHFKNAKETIEQVLETNNKRRNTQTILDKNLSEVNALSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG +A KN + LKE L+ E + L+ L+ IPN+P + VP G Sbjct: 61 IGQLMKEGKKEEAEAAKNRVAELKEANKELQAEMDRAATDLQNLLYTIPNIPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPVKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F++ +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTSALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRTAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MN 418 Sbjct: 418 TG 419 >gi|171741218|ref|ZP_02917025.1| hypothetical protein BIFDEN_00292 [Bifidobacterium dentium ATCC 27678] gi|283455419|ref|YP_003359983.1| serS Seryl-tRNA synthetase [Bifidobacterium dentium Bd1] gi|171276832|gb|EDT44493.1| hypothetical protein BIFDEN_00292 [Bifidobacterium dentium ATCC 27678] gi|283102053|gb|ADB09159.1| serS Seryl-tRNA synthetase [Bifidobacterium dentium Bd1] Length = 428 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 139/431 (32%), Positives = 234/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L DE R +K+ E RA++ +IG Sbjct: 1 MLDIQFIREHADVVKESQRKRGESVELVDEVLRSDEVRRSSLKEFEAARAQQ----KEIG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A L ET L +++ + + + N+ E P G Sbjct: 57 KKVAAAPADEKAKLIAETKELSQKVSEYKAAADAAAEEYTTAMWKLSNIVEPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D +R K+ G+RF L G +A ++ A Sbjct: 117 DYVVVKKVGQIRDFAAEGFEPKDHLTLGRGVAGIDMERGVKVGGSRFYFLRGQVARMQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDEQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ PLR+ + +R EAG+AG+DT G++R HQF K E+ T++EDS Sbjct: 236 LAGMHENEILDLSDGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYTKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE +L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 YKEHEHLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AILEN+ DGS+ IP +R Sbjct: 356 CTEYQARRLNIRERMEDGN-TRAVSTLNGT-LATTRWLVAILENHQQKDGSIVIPQAMRA 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|262200213|ref|YP_003271421.1| seryl-tRNA synthetase [Gordonia bronchialis DSM 43247] gi|262083560|gb|ACY19528.1| seryl-tRNA synthetase [Gordonia bronchialis DSM 43247] Length = 419 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 144/429 (33%), Positives = 232/429 (54%), Gaps = 13/429 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + + R +P + +L D R I + + +R+ + + Q+G Sbjct: 1 MIDLRILRENPDLVRASQRTRGEDPGLVDTLLEADGTRRAAIVEADALRSEQKALGKQVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + + L + L EQ+ ++ + I N+ + P G Sbjct: 61 KAHGDEKTA----LLAKGKELAEQVKAAVARQNAADEAAATAHRAISNIVADGAPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L +P I ++H E+GEALGL+D +R K+SG+RF LTG A L+ L Sbjct: 117 DYVVLE--HVGEPREIADPKDHLELGEALGLIDMERGAKVSGSRFYFLTGQGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLT 237 +G+T + P+LVR E M GTG + AD+++ D +L+ TSEV L Sbjct: 175 NMAAQ-KAVANGFTLMIPPVLVRPEVMEGTGFLGAHADEVYHLDKDDDLYLVGTSEVPLA 233 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 + +EI++ P R+ + FR EAGS G+DTRG++R HQF K E + ED+ Sbjct: 234 GYHMNEIVDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCKPEDADA 293 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EH+R+L +E+L +D+ YRV+ + GDLG SA + +D E W+ QN YRE++S S C Sbjct: 294 EHQRLLGWEKEMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQNTYRELTSTSNCT 353 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +Q+RR++ RYRD + K + TLNG+ +A R L+AILEN+ DGSV +P L ++ Sbjct: 354 TYQARRLSIRYRDDSGK-PQIAATLNGT-LATTRWLVAILENHQQPDGSVRLPAELAKFV 411 Query: 418 NNLAVIKKE 426 V+ Sbjct: 412 -GTDVLTPR 419 >gi|117929311|ref|YP_873862.1| seryl-tRNA synthetase [Acidothermus cellulolyticus 11B] gi|166200590|sp|A0LWR6|SYS_ACIC1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|117649774|gb|ABK53876.1| seryl-tRNA synthetase [Acidothermus cellulolyticus 11B] Length = 420 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 148/428 (34%), Positives = 239/428 (55%), Gaps = 11/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R +PE L + + R +P + L+ DE R + + E +RA + + +I Sbjct: 1 MIDLRLLRDDPERLRASQRARGEDPGLVDAALAADENRRAAVARFEALRAEQKALGRRIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + + L + L E + E + ++ ++ + I N+ +E P Sbjct: 61 SAPPDEKPA----LLDRAKELAELVKAAEAARDDADAACREALLAISNLVDDEAP-RGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +++ +G P+ R+H E+GE LG +D +RA K+SG+RF LTG A LE AL Sbjct: 116 EDFVVLEEIGTPPTFSFPPRDHLELGERLGAIDVERAAKVSGSRFYYLTGVGALLEFALV 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 + G+ V P+LVR AM GTG + + A+++F D +L+ TSEVSL Sbjct: 176 DLAL-RQAVTAGFVPVIPPVLVRPPAMEGTGFLGQAAENVFHLEKDDFYLVGTSEVSLAA 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+++ LP R+ + FR EAGS G+DTRG++R HQF K E+ S T ++ E Sbjct: 235 YHMGEILDAAQLPRRYVGFSTCFRREAGSHGKDTRGIIRVHQFDKVEMFSFTTVGEAAAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L ++ L L++ +RV+ + TGDLG SA + +D E W+ Q YRE++S S C Sbjct: 295 HRRLLEWEKQFLTALEIPFRVIDVATGDLGASAARKFDCEAWIPTQGRYREVTSTSNCTE 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR++ R RD ++ TLNG+ VA+ R ++A+LEN+ ADGSV +P LR Y+ Sbjct: 355 FQARRLDIRMRDEQG--IRPLATLNGTLVAIPRTIVAVLENHQQADGSVVVPRALRDYL- 411 Query: 419 NLAVIKKE 426 V++ + Sbjct: 412 GTDVLRPK 419 >gi|87310730|ref|ZP_01092857.1| seryl-tRNA synthetase [Blastopirellula marina DSM 3645] gi|87286487|gb|EAQ78394.1| seryl-tRNA synthetase [Blastopirellula marina DSM 3645] Length = 426 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 137/432 (31%), Positives = 228/432 (52%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +++ N + + + R ++ + +L+ R ++ ED R N S IG+ Sbjct: 1 MLDRKFVLDNVDLVQENCRLRGVDADVAKVAALETARRQKQQETEDFNRRANETSKLIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A AE + E L+E+ +KE + + + L+ IPN+ PIG Sbjct: 61 ASAEERP----QIIEEGRKLREEKDAAQKEVDRLDAEIVDLLRLIPNLTHPAAPIGADDQ 116 Query: 121 ENILIRSVGKKP-SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ +R +P +H E+GE L L+DF+ +++GA F L LE AL Sbjct: 117 ANLELRRGKTEPRKFDFKVLDHVELGENLDLIDFESGAQVAGAGFYFLKNEAVLLELALQ 176 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLT 237 ++++++ + G+T P L R E ++G G IP+ + L+ T+E++L Sbjct: 177 RYVLEI-LMKEGFTPTITPDLARTEILHGVGFIPRGPETQIYSVENTDLNLVATAEITLG 235 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 + + +++E++ LP + ++ +R+EAGSAGR +RG+ R HQF K E+ + T + S Sbjct: 236 GMNAGKVLEAEDLPKLYCGMSHCYRTEAGSAGRASRGLYRVHQFTKVEMFAFTLPDQSDA 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCS 354 ++ +I L + YRVV TGDLG A + +DLE W+ G+ + E++S S Sbjct: 296 TLDKFCDLECQIFDGLGIPYRVVDTATGDLGGPAYRKFDLEAWMPGRGEAGEWGEVTSTS 355 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 C ++Q+RR+N RYR K +F HTLNG+ +A+ R +IA+LENY ADGS+ IP VLR Sbjct: 356 NCTDYQARRLNIRYRTKGEKGTQFAHTLNGTAIAISRGIIAVLENYQQADGSIEIPAVLR 415 Query: 415 PYMNNLAVIKKE 426 +M + I + Sbjct: 416 SFM-GVDKIAAK 426 >gi|269958011|ref|YP_003327800.1| seryl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269306692|gb|ACZ32242.1| seryl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 424 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 141/427 (33%), Positives = 227/427 (53%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R NP+ + + R +P + L D + R + E++RA + + ++ Sbjct: 1 MIDLRLLRDNPDVVRESQVARGDDPALVDAALDADARRRASLAAFEELRAEQKAMGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + +L+ ++ + +K + + + ++L K+ + + P Sbjct: 61 QAQGDEKQALLARTRHLSDEVKSRSKDADDAAAALDAALWKISNVVEGAPAGGEDDYVVI 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 R + ++H +GE L +D R K+SG RF LTG A LE A+ Sbjct: 121 QHVGTPRDFA---AEGFEPQDHLALGEGLRAIDTARGAKVSGTRFYFLTGIGARLELAIL 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 +D + G+T V P LV+ E M GTG + AD+++ D +L+ TSEV+L Sbjct: 178 NAAMD-QAVQAGFTPVITPTLVKPETMRGTGFLGAHADEVYRLEKDDLYLVGTSEVALAG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EII+ P R+ + +R EAGSAGRDTRG++R HQF K E+ S R ED+ E Sbjct: 237 YHADEIIDLADGPARYAGWSACYRREAGSAGRDTRGIIRVHQFHKVEMFSYCRPEDAAEE 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L+ E +L +++L YRV+ GDLG SA + +D E WL QN + E++S S C Sbjct: 297 HQRLLAWEEAMLAKVELPYRVIDTAAGDLGSSAARKFDCEAWLPTQNRWLELTSTSNCTT 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ R R + + TLNG+ + R ++AILEN+ ADGSV +P LRPY+ Sbjct: 357 FQARRLGVRERTADGSTRN-VATLNGT-LGTTRWIVAILENHQQADGSVRVPEGLRPYLG 414 Query: 419 NLAVIKK 425 L V++ Sbjct: 415 GLEVLEP 421 >gi|213693031|ref|YP_002323617.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254783008|sp|B7GN83|SYS_BIFLI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|213524492|gb|ACJ53239.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459211|dbj|BAJ69832.1| seryl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 428 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 137/431 (31%), Positives = 233/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +LS D R +K E+ RA++ +IG Sbjct: 1 MLDIQFIREHTDIVKESQRKRGESVELVDEVLSSDTARREALKAFEEARAQQ----KEIG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A L ET L + + + + + + N+ E P G Sbjct: 57 KKVASVPADEKAKLIAETKELSQTVAEYKAKADSAAEEYTTAMWRLSNIVEPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D R K+ G+RF L G +A ++ A Sbjct: 117 DYVVVKKVGQIRDFAAEGFEPKDHLTLGAGVAGIDMRRGVKVGGSRFYFLRGQVARMQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ + PLR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 236 LAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE +L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 YKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AI+EN+ DGS+ IP +R Sbjct: 356 CTEYQARRLNIRERMEDGG-TRPVSTLNGT-LATTRWLVAIMENHQQKDGSIEIPKAMRA 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|46190424|ref|ZP_00121503.2| COG0172: Seryl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|189440622|ref|YP_001955703.1| seryl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|317482165|ref|ZP_07941188.1| seryl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] gi|238692045|sp|B3DQG7|SYS_BIFLD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|189429057|gb|ACD99205.1| Seryl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|316916399|gb|EFV37798.1| seryl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] Length = 428 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 137/431 (31%), Positives = 234/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +LS D R +K E+ RA++ +IG Sbjct: 1 MLDIQFIREHTDIVKESQRKRGESVELVDEVLSSDTARREALKAFEEARAQQ----KEIG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A L ET L +++ + + + + N+ E P G Sbjct: 57 KKVASAPADEKAKLIAETKELSQKVSEYKSKADSAAEEYTTAMWKLSNIVEPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D R K+ G+RF L G +A ++ A Sbjct: 117 DYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ + PLR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 236 LAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + EHE +L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 YKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AI+EN+ DGS+ IP +R Sbjct: 356 CTEYQARRLNIRERMEDGG-TRPVSTLNGT-LATTRWLVAIMENHQQKDGSIEIPQAMRA 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|239930246|ref|ZP_04687199.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 412 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 144/415 (34%), Positives = 228/415 (54%), Gaps = 11/415 (2%) Query: 15 DIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 + + R + + +LS DE+ R + +++RA + + + +A + L Sbjct: 2 RASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKALGKLVPKATGDEKAE----L 57 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI--LIRSVGKK 131 + LK + + + + ++L+ + N+ +VP+G + +V Sbjct: 58 LKKAEQLKADVKAADADRDAAAAETQELLLKLGNLIHPDVPVGGEEDFVTLETHGTVRDF 117 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + ++H E+G+ LG +D +R K+SG+RF LTG A LE AL I + G Sbjct: 118 AAEGFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNAAIAQ-ATAAG 176 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSL 250 +T + P LVR ++M GTG + + A D++ D +L+ TSEV L + EII++ L Sbjct: 177 FTPMLTPALVRPQSMAGTGFLGQAAQDVYHLDKDDLYLVGTSEVPLAAYHMDEIIDADRL 236 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 PLR+ +P FR EAGS G+DTRG+ R HQF K E+ S E+S EH+R+L ++ L Sbjct: 237 PLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEESQAEHQRLLEWEKQWL 296 Query: 311 KRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD 370 L+L +RV+ + +GDLG SA + YD E W+ Q YRE++S S C FQSRR+ R RD Sbjct: 297 TSLELPFRVIDVASGDLGSSAARKYDCEAWIPTQGKYRELTSTSDCTEFQSRRLQIRVRD 356 Query: 371 PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 K+++ TLNG+ AV R ++AILEN+ ADGSV +P VLRPY+ +++ Sbjct: 357 --GKTVRPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPYLGGREILEP 409 >gi|288928178|ref|ZP_06422025.1| serine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] gi|288331012|gb|EFC69596.1| serine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] Length = 429 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 151/422 (35%), Positives = 237/422 (56%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+ + E +L D++ R +K++ + NS S Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFKGAKDAVEKVLETDKRRREAQQKLDKNKQEANSMSRQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G V+ +K + + KE L+ + E L L+ IPN+P +EVP G Sbjct: 61 IGMLMKDGKTQEVEEVKAKVAVYKENDKQLQAQMDEAEQELTTLLCNIPNIPADEVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 AN+N++++ G P + H+++ + L+DFD K++GA F + G +A L+RA Sbjct: 121 DANDNVVVKEGGIMPQLPEDALCHWDLCKKYNLIDFDLGVKITGAGFPIYIGKMARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L F +D + GY EV PL+V + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPLVVNQASGYGTGQLPDKEGQMYHAEQDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ I++ K LP+ + FR EAGS G+D RG+ R HQF K E+V I + E S Sbjct: 240 TNIFRDVILDEKDLPVMRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSH 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H++ML E +L++L+L Y ++ LC GD+ F++ YD EVW A Q + E+SS S Sbjct: 300 ESHKKMLEHVEGLLQKLELPYHILLLCGGDMSFTSSICYDFEVWSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RYR K ++ HTLNGS +A+ R + AI+EN +G + +P VL PY Sbjct: 360 ESYQANRLKCRYRRAEDKKIELCHTLNGSALALPRIVAAIIENNQTPEG-IRVPRVLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|330836880|ref|YP_004411521.1| seryl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329748783|gb|AEC02139.1| seryl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 428 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 145/429 (33%), Positives = 240/429 (55%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + ++ E + + R+++ + I++L E+ L+++ E++R+ RN N+ + Sbjct: 1 MIDAKDLKTRREEIARNIANRNMKVDIDGIIALQEQRLALMQETENLRSDRNENAR---K 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + L E +KE++ LE V + ++ + IPN + P+G + Sbjct: 58 MKQKLSQDERLILIEEGKAIKERIASLETGLETVEARYQEGLRSIPNFAHPDAPVGKEES 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ +++ VG P +H ++GE L L+DF+ ATK+SG +F + L+ L + Sbjct: 118 DSTVMKHVGIPPVFAFKPLDHVQLGEKLDLIDFETATKVSGPKFYYIKNQGVLLQMGLER 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 + +D+ +HG+T P + +DE + G G P+ A+ G L+ T+E++L Sbjct: 178 YALDI-VMKHGFTPFITPDVAKDEILQGIGFNPRGAESNIYALEGTGTSLVGTAEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 YS EI++ +LPL+ L+ FR EAG AG+ ++G+ R HQF K E+ E+S Sbjct: 237 YYSGEILDKANLPLKLAGLSHCFRREAGGAGQYSKGLYRVHQFSKLEMFIFCLPEESDVF 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H R+L+ E+I L L YRV+ CTGDLG A + +D+E W+ G+ Y E++S S Sbjct: 297 HARLLAIEEDIFSGLGLAYRVLDTCTGDLGAPAYRKFDIEAWMPGRGENGEYGEVTSTSN 356 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++Q+R + RYRD + K L+F H LNG+ VA+ R L+AILENY N DGSVTIP L P Sbjct: 357 CTDYQARNLGIRYRDDDGK-LQFVHMLNGTAVAISRALVAILENYQNEDGSVTIPEKLIP 415 Query: 416 YMNNLAVIK 424 Y+ +VI Sbjct: 416 YV-GFSVIP 423 >gi|160890213|ref|ZP_02071216.1| hypothetical protein BACUNI_02653 [Bacteroides uniformis ATCC 8492] gi|270294260|ref|ZP_06200462.1| seryl-tRNA synthetase [Bacteroides sp. D20] gi|317481474|ref|ZP_07940540.1| seryl-tRNA synthetase [Bacteroides sp. 4_1_36] gi|156860601|gb|EDO54032.1| hypothetical protein BACUNI_02653 [Bacteroides uniformis ATCC 8492] gi|270275727|gb|EFA21587.1| seryl-tRNA synthetase [Bacteroides sp. D20] gi|316902384|gb|EFV24272.1| seryl-tRNA synthetase [Bacteroides sp. 4_1_36] Length = 424 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 152/427 (35%), Positives = 232/427 (54%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N + + L+K+ + + +L ++K + ++ A NS S Sbjct: 1 MLTIKQITENTDAVLRGLEKKHFKNAKETIAQVLDFNDKRKANQTILDKNLAEANSLSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG +A K+ + LKE L+ + + L+ L+ IPNVP + VP G Sbjct: 61 IGQLMKEGKKEEAEAAKSRVAELKEVNKDLQANMDQAANDLQTLLYTIPNVPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GADDNVVEKIGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRTAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVI 423 +I Sbjct: 418 T-GFEII 423 >gi|325959950|ref|YP_004291416.1| Seryl-tRNA synthetase [Methanobacterium sp. AL-21] gi|325331382|gb|ADZ10444.1| Seryl-tRNA synthetase [Methanobacterium sp. AL-21] Length = 426 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 148/426 (34%), Positives = 235/426 (55%), Gaps = 5/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R+NP+ + + KKR E ++ D K R +KK+ ++RA RN S Sbjct: 1 MLDIKLFRENPDLILESEKKRFRTTENVEKVIEFDLKWRNGLKKLNELRAERNKLSKSFN 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A +G L AL+N + +++ LE + E + + + N+ +VP+ + Sbjct: 61 EARKQGKDEL-KALQNRAKEISKEINELEPKISEYIEARDEFRYKVGNILDSDVPVSETE 119 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N +I G PS H ++ E + +F RA ++SG+RF L + +L AL Sbjct: 120 EDNKVISEFGDMPSFSFEPANHVDLIETIDGAEFKRAAEVSGSRFYYLKEDIVYLNMALL 179 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +F +D S+ GY P ++ + + T ++ F + ++ + ++I TSE +L Sbjct: 180 KFAMDT-LSQKGYEIFQTPFFIKHDVIKETAELADFEETLYKIEGEDLFMIATSEQTLAA 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EII+ ++LP ++ L+ FR EAGS GRDT G+ R HQF K E E S Sbjct: 239 LHRGEIIDERTLPRKYCGLSTCFRREAGSHGRDTLGIFRVHQFEKIEQFIFCDAESSRDL 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ +L AE I ++L L YR+VS+ +G+L +A K YDLE W G + YRE+ SC+ CG+ Sbjct: 299 HQELLENAELIYQKLGLPYRIVSIVSGELNDNAAKKYDLEAWFPGSSTYRELVSCTNCGD 358 Query: 359 FQSRRMNSRYRDP-NSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +Q+R++N+RY +S SLK HTLN + +A R + ILENY DG++ +P VL PYM Sbjct: 359 YQARKLNARYGIHGDSDSLKMCHTLNSTAIATERTICCILENYQQEDGTIKVPEVLIPYM 418 Query: 418 NNLAVI 423 N V+ Sbjct: 419 NGKTVL 424 >gi|289643407|ref|ZP_06475528.1| seryl-tRNA synthetase [Frankia symbiont of Datisca glomerata] gi|289506805|gb|EFD27783.1| seryl-tRNA synthetase [Frankia symbiont of Datisca glomerata] Length = 420 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 148/426 (34%), Positives = 230/426 (53%), Gaps = 9/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR+NP+ + A + + ++ + IL+LD R L ++ + R ++ Sbjct: 1 MLDRRFIRENPDVVREAARVKGVDLDVDGILALDRSVRSLQHALDTAQRER----RELAG 56 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + + + L+ ++ L QL E L+ L+ PN+P + P+G + Sbjct: 57 SFKSADAAGRERLRERSAALDVQLRETRDELETAGERLRDLLLRTPNIPWDGAPVGPDES 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +IR G++P+ +H E+ E G +F+RA +SG R L G L LERA+ Sbjct: 117 ANTVIRVWGERPAFDFTPLDHVELAEKRGWAEFERARNVSGERAYALAGPLVLLERAVHS 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 + +DL + VS P LV+ EA+ GTG +P ++++ D +L T+EV+L L Sbjct: 177 YALDLLAH-RDFRLVSVPSLVKREALVGTGFLPGHGEEIYELPADELFLAGTAEVALVGL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE--DSFT 297 ++ E++ + LPLR+ ++P FR E GSAGRD RG+LR HQF K E I + S Sbjct: 236 HAGEMLPLRDLPLRYAGISPCFRREVGSAGRDVRGLLRVHQFEKVEQFVICEADEKQSAH 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H +L AE +L+ L L Y VV TGD+G + D+ W YRE SCST Sbjct: 296 WHAELLDTAETVLQSLGLAYEVVECATGDMGLGKFRMNDINTWFPSLERYRETHSCSTLH 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RY+D + ++F HTLN + VA R L AILEN+ A+ V IP VLRPY+ Sbjct: 356 DWQARRANIRYKDAEGR-VRFAHTLNNTAVATPRLLAAILENFQTAEHHVRIPKVLRPYL 414 Query: 418 NNLAVI 423 + ++ Sbjct: 415 GDRELL 420 >gi|194476552|ref|YP_002048731.1| seryl-tRNA synthetase [Paulinella chromatophora] gi|171191559|gb|ACB42521.1| seryl-tRNA synthetase [Paulinella chromatophora] Length = 426 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 176/431 (40%), Positives = 263/431 (61%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R NPE + L +R ++ E + + + + L + +++R NS Q+ + Sbjct: 1 MLDQRLVRDNPEIIVTQLGRRGIKLSLEGLQLIAQHQKSLESRRSTLQSRANSIGKQVSE 60 Query: 61 AIAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I +G V+ L+ + +K Q+ ILE+EE LK+ + PN+P + P G Sbjct: 61 TIWKGIPFESPEVNRLREIGNKIKRQVSILEEEEQIFTYYLKEQLLTFPNLPSKSCPNGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N+ R G KP + H+EI + LG++D +R+ +++ +RF L G A LERA Sbjct: 121 TEVDNVEQRCWG-KPRQEVNLKNHWEIADKLGIIDTERSVRIAQSRFVTLIGQGAKLERA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL 236 L FM+D HT + GY E+ P+L ++ G+GQ+PKFA++ F C+ D WLIPTSEV + Sbjct: 180 LINFMLDFHT-KKGYCEILPPILANTNSLTGSGQLPKFAEESFRCSEDDLWLIPTSEVPI 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T+L+ EII + LPL++ +P FR EAGS GRDTRG++R HQF K EL + +DS Sbjct: 239 TSLHRDEIIAADDLPLKYVAYSPCFRREAGSYGRDTRGLIRLHQFNKVELYWFSHPDDSD 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H ++ + AE +L+ L+L YRV+ LCTGD+GFSA +TYDLEVWL G N YREISS S C Sbjct: 299 KAHIQITADAEAVLQALELPYRVLDLCTGDIGFSATRTYDLEVWLPGANAYREISSSSNC 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQSRR + R + + K+ + HTLN SG+A+GR + A+LE DG+V +P ++ PY Sbjct: 359 ADFQSRRSSIRMK--SGKNTQLVHTLNASGLAIGRTMAALLETGQQNDGTVILPAIIAPY 416 Query: 417 MNNLAVIKKEH 427 + EH Sbjct: 417 F-GRDRLVPEH 426 >gi|227494252|ref|ZP_03924568.1| serine--tRNA ligase [Actinomyces coleocanis DSM 15436] gi|226831986|gb|EEH64369.1| serine--tRNA ligase [Actinomyces coleocanis DSM 15436] Length = 420 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 149/428 (34%), Positives = 231/428 (53%), Gaps = 11/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ +R+NPE + R +P + IL+ D R + + E RA + S IG Sbjct: 1 MIDIKALRENPEPARQSQIARGADPALVDEILAADALRRKTLTEFEQKRAEQKEISRSIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A +A+ + L +++ LE E + +L IPNV ++ VP Sbjct: 61 KAAK----EDREAILTQAQELAKEVKELEARATEAGAKADELARRIPNVIVDGVP-TGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +++R G ++H + E L +D R K+SG+RF L+G A LE AL Sbjct: 116 DAYVVLRHEGTPREFDFEPQDHLALAEGLKAIDMKRGAKVSGSRFYYLSGIGARLELALL 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +D ++G+T ++ P LV E M GTG + + +D+++ D +L TSEV+L Sbjct: 176 TMALDQGL-KYGFTPLTTPTLVTPEIMGGTGFLNEHSDEIYYLPADDLYLTGTSEVALAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI+E P R+ + +R EAGSAG+DTRG++R HQF K E+ S E++ E Sbjct: 235 YHKDEILELNGEPARYLGWSTCYRREAGSAGKDTRGIIRVHQFNKVEMFSFCPVEEAEAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R L+ EE+L++++L YRV+ GDLG SA + +D E WL QN + E++S S C Sbjct: 295 HARFLAWEEEMLQKMELPYRVIDTAAGDLGTSAARKFDCEAWLPTQNRWMEVTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+N R R + TLNG+ +A R L+A LEN+ N DGSV +P LRPY+ Sbjct: 355 FQARRLNIRERVDGD--TRIVATLNGT-LATTRWLVAFLENHQNEDGSVNVPVALRPYLG 411 Query: 419 NLAVIKKE 426 + ++ Sbjct: 412 GVEKLEPT 419 >gi|115451355|ref|NP_001049278.1| Os03g0198400 [Oryza sativa Japonica Group] gi|108706679|gb|ABF94474.1| Seryl-tRNA synthetase, putative, expressed [Oryza sativa Japonica Group] gi|113547749|dbj|BAF11192.1| Os03g0198400 [Oryza sativa Japonica Group] gi|215736959|dbj|BAG95888.1| unnamed protein product [Oryza sativa Japonica Group] gi|215765322|dbj|BAG87019.1| unnamed protein product [Oryza sativa Japonica Group] gi|222624378|gb|EEE58510.1| hypothetical protein OsJ_09790 [Oryza sativa Japonica Group] Length = 445 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 131/438 (29%), Positives = 216/438 (49%), Gaps = 17/438 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R +PE + + + R + + +++LD++ R +++ IR N S Sbjct: 1 MLDINLFRTEKGGDPELIRKSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ A AL T +K++L E E E +L + I N+ E VP+ Sbjct: 61 KEIGKLKA--KKEDASALIQSTEEIKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N+++R+ G + + H ++ + L ++ ++ ++G R L L Sbjct: 119 SDDEANNLIVRTWG-EKRMEGNLKNHVDLCKMLDIVALEKGVDVAGGRGYYLKDEGVLLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 AL F + + G+ + P +R E M Q+ +F ++++ T + ++LI TS Sbjct: 178 LALINFGLAF-LRKRGFKPMQTPFFMRKETMGKCAQLAQFDEELYKLTGDGEEKYLIATS 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+R+ + FR EAGS GRDT G+ R HQF K E +T Sbjct: 237 EQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSP 296 Query: 293 ED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 D S+ HE M+ +E+ K + L Y++VS+ +G L +A K YDLE W YRE+ Sbjct: 297 NDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYREL 356 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C +FQ+RR+ Y + + +S +F H LN + A R L ILEN+ +G V Sbjct: 357 VSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQRENG-VE 415 Query: 409 IPTVLRPYMNNLAVIKKE 426 +P L+PYM + + + Sbjct: 416 VPKALQPYMGGIDFLPFK 433 >gi|68262787|emb|CAI36275.1| serS [Corynebacterium jeikeium K411] Length = 444 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 152/429 (35%), Positives = 241/429 (56%), Gaps = 7/429 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R NP+ + + R +P + +L D + R I + RA + + S ++G Sbjct: 21 MIDLKFLRDNPDVARESQRTRGEDPALIDQLLEADSQRREAISAADAARADQKAFSKEMG 80 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + + AL+ E E + LE+ + ++ L I N+ E P Sbjct: 81 QKMRSASDEEKLALREEGKQKAEAVKKLEEAQSSAEQAVHDLQMQISNIVEEGAP-AGGE 139 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + + VG+ P ++H E+GE+LGL+D R TK+SGARF LTG A L+ + Sbjct: 140 EDFVTLDVVGEPPQFDFEPKDHLELGESLGLIDMKRGTKVSGARFYFLTGDGALLQLGML 199 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q EHG+ + P+LVR E M GTG + AD+++ D +L+ TSEV+L Sbjct: 200 QLAAQ-KAVEHGFKLMIPPVLVRPEIMSGTGFLGAHADEIYHLEEDDMYLVGTSEVALAG 258 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EII+ + PLR+ + FR EAGS G+DTRG++R HQF K E+ + E++ Sbjct: 259 YHSEEIIDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVYCKPEEATEV 318 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ +L+ E+L +++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 319 HQELLAMEREMLGAIEVPYRVIDVAGGDLGSSAARKFDTEAWVPTQQTYRELTSTSNCTT 378 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ RR+ +RYRD + K+ + TLNG+ +A R L+AILEN+ ADGSV +P LRP++ Sbjct: 379 FQGRRLKTRYRDADGKA-QTAATLNGT-LATTRWLVAILENHQQADGSVVVPKALRPFV- 435 Query: 419 NLAVIKKEH 427 ++K + Sbjct: 436 GKDILKPSN 444 >gi|332297813|ref|YP_004439735.1| Seryl-tRNA synthetase [Treponema brennaborense DSM 12168] gi|332180916|gb|AEE16604.1| Seryl-tRNA synthetase [Treponema brennaborense DSM 12168] Length = 425 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 142/429 (33%), Positives = 241/429 (56%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I++N E + + R++ ++ ++SL ++ L+ +++ ++ +RN N+ Sbjct: 1 MLDYRFIKENLEAVKKNIADRNMSADADMVVSLFDQRTALVTELQSLQQKRNDNAK---A 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ + L E + K+ + EK E L+ IPN+ + P+G+ + Sbjct: 58 MKAKLSDEERRKLIEEGKSFKDLIADCEKRLAETEERLELEGRKIPNMAHPDAPVGSVDS 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ ++ VG + +++H ++G+ L L+DFD ATK+SG +F L LE++L Sbjct: 118 ENLEVKRVGTPRTFTFKAKDHVQLGQELDLIDFDAATKVSGNKFYYLKNEAVFLEQSLVM 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 + +++ +HG+T P + R+E + G G P+ + + L+ T+E++L Sbjct: 178 YALNI-LRKHGFTPFITPDVAREEVLQGIGFNPRGNESNVYALEDEHACLVATAEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ LPL + L+ FR EAG+AG+ ++G+ R HQF K E+ E S Sbjct: 237 YHSGEILDKSKLPLLYCGLSHCFRREAGAAGQFSKGLYRVHQFTKLEMFVYCLPEQSDAL 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCST 355 HE++ EEI L L +RVV CTGDLG A + +DLE W+ G+ + E++S S Sbjct: 297 HEKLRLIEEEIFTGLGLPFRVVDTCTGDLGAPAYRKWDLEAWMPGRGETGDWGEVTSTSN 356 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +FQ+RR+N RY+D + K+ K+ H LNG+ VAV R L+AILENY N DGS+++P L P Sbjct: 357 CTDFQARRLNVRYKDDDGKN-KYVHMLNGTAVAVSRALVAILENYQNEDGSISVPAALVP 415 Query: 416 YMNNLAVIK 424 + I+ Sbjct: 416 FC-GFDTIR 423 >gi|312196188|ref|YP_004016249.1| seryl-tRNA synthetase [Frankia sp. EuI1c] gi|311227524|gb|ADP80379.1| seryl-tRNA synthetase [Frankia sp. EuI1c] Length = 420 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 140/426 (32%), Positives = 237/426 (55%), Gaps = 9/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR NP+ + A++ + L+ + +L LD++NR L + +RR S++ + + Sbjct: 1 MLDKRFIRDNPDVVKQAVRVKGLDLDVDELLKLDQENRELQFAKDQALSRRKSSAKEFAK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + + L+ +++ +L L +++ L +L+ P +P E P+G + Sbjct: 61 A----DAARKEELRAQSAETDAELRRLNEQQAATSERLTELMLATPTIPWEGAPVGPDES 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N ++R+ G P+ + +H ++ E G +F RA +++G R L G L LERAL Sbjct: 117 ANTVVRTWGTPPTFDFETLDHVDLAEKRGWAEFARARRVAGERAYALCGDLVLLERALHS 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNL 239 + +D+ + +S P+LV++ + G+G +PK +++ +L T+EV+L L Sbjct: 177 YALDV-LRGRDFQLMSVPVLVKEAPLVGSGMLPKGRAEIYEIPADDAYLAGTAEVALVGL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE--DSFT 297 +S EI+++ LP+R+ ++ FR E GSA RD RG+LR HQF K E I ++ +S Sbjct: 236 HSGEILDASRLPIRYAGISTCFRREIGSASRDVRGLLRVHQFEKVEQFVICADDLAESDR 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H +L AE IL+ L L Y VV TGD+G + D+ W +YRE SCS+ Sbjct: 296 WHAELLGTAEAILQALGLAYEVVECSTGDMGVGKYRMNDINTWFPSLGMYRETHSCSSLK 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RYR P+ + + F +TLN + VA R L A+LEN+ AD ++ +P VLRPY+ Sbjct: 356 DWQARRANLRYRTPDGQ-IHFAYTLNNTAVATPRLLAAVLENFQQADATLAVPEVLRPYL 414 Query: 418 NNLAVI 423 + Sbjct: 415 GGRDTL 420 >gi|218192264|gb|EEC74691.1| hypothetical protein OsI_10395 [Oryza sativa Indica Group] Length = 445 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 131/438 (29%), Positives = 216/438 (49%), Gaps = 17/438 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R +PE + + + R + + +++LD++ R +++ IR N S Sbjct: 1 MLDINLFRTEKGGDPELIRKSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ A AL T +K++L E E E +L + I N+ E VP+ Sbjct: 61 KEIGKLKA--KKEDASALIQSTEEIKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N+++R+ G + + H ++ + L ++ ++ ++G R L L Sbjct: 119 SDDEANNLIVRTWG-EKRMEGNLKNHVDLCKMLDIVALEKGVDVAGGRGYYLKDEGVLLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 AL F + + G+ + P +R E M Q+ +F ++++ T + ++LI TS Sbjct: 178 LALINFGLAF-LRKRGFKPMQTPFFMRKETMGKCAQLAQFDEELYKLTGDGEEKYLIATS 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+R+ + FR EAGS GRDT G+ R HQF K E +T Sbjct: 237 EQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSP 296 Query: 293 ED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 D S+ HE M+ +E+ K + L Y++VS+ +G L +A K YDLE W YRE+ Sbjct: 297 NDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYREL 356 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C +FQ+RR+ Y + + +S +F H LN + A R L ILEN+ +G V Sbjct: 357 VSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKENG-VE 415 Query: 409 IPTVLRPYMNNLAVIKKE 426 +P L+PYM + + + Sbjct: 416 VPKALQPYMGGIDFLPFK 433 >gi|296131015|ref|YP_003638265.1| seryl-tRNA synthetase [Cellulomonas flavigena DSM 20109] gi|296022830|gb|ADG76066.1| seryl-tRNA synthetase [Cellulomonas flavigena DSM 20109] Length = 426 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 153/432 (35%), Positives = 229/432 (53%), Gaps = 15/432 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D+Q +RQ+P+ + + R +P + +L D + R + E +RA + S Q+ Sbjct: 1 MIDLQLLRQDPDVVRASQVARGEDPHLVDEVLDADARRRSALTGYETLRAEQKSLGKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + AL T L ++ L+ + +L I NV E VP G Sbjct: 61 QASGDEK----QALLAHTKDLAARVKALQADADAAAERATELARRIGNVIEEGVPSGGED 116 Query: 120 NENILIRSVGKK-----PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 + +L + + ++H ++GE L +D +R K+SG+RF LTG A L Sbjct: 117 DYVVLEHVGTPRDLAAEYGPDFVVKDHLDLGEGLRAIDTERGAKVSGSRFYFLTGVGARL 176 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSE 233 E AL +DL T HG+ P LV+ E M GTG + AD+++ D +L+ TSE Sbjct: 177 ELALLNAAMDLAT-RHGFVPTITPTLVKPEVMAGTGFLGAHADEIYRLEADDLYLVGTSE 235 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+L +++EI++ PLR+ + +R EAGS G+DTRG++R HQF K E TR E Sbjct: 236 VALAGYHANEIVDLTGGPLRYAGWSACYRREAGSYGKDTRGIIRVHQFHKVEAFVWTRPE 295 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 D+ EH R+L +E+L +DL YRV+ GDLG SA + +D E WL Q + E+SS Sbjct: 296 DAAAEHRRILDLEKEMLALVDLPYRVIDTAAGDLGSSAARKFDCEAWLPSQQRWMEVSST 355 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C FQ+RR+ R R + TLNG+ + R ++AILEN+ ADGSV +P L Sbjct: 356 SNCTTFQARRLGVRERTDDGTRT--VATLNGT-LGTTRWIVAILENHQQADGSVRVPEGL 412 Query: 414 RPYMNNLAVIKK 425 RPY+ L V++ Sbjct: 413 RPYLGGLEVLEP 424 >gi|42560626|ref|NP_975077.1| seryl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81829421|sp|Q6MUG5|SYS_MYCMS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|42492122|emb|CAE76719.1| Serine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320587|gb|ADK69230.1| serine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 422 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 186/427 (43%), Positives = 269/427 (62%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH---LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI +I QN + + L KR+ +Y + + K + ++ K E +++R+N S + Sbjct: 1 MLDINYIEQNLDEVIQILNKRNQQDYSEDLKYAVEKNLKRKQILVKSEALKSRKNQLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG I + D K E +L EQ+ L++E V + + +S IPN+ +++ G Sbjct: 61 IGILIKDKKNEQADKAKAEVVSLNEQIIKLDEELRIVNDQILEKLSYIPNLSHKDIYFGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ IR P H + H+EI LGL+DF++ KLSG+RF + TG + L RA Sbjct: 121 SDEDNVEIRKTKHNPLLTHST-PHWEIATKLGLVDFEKGVKLSGSRFLIYTGLGSKLVRA 179 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 + ++ H +HGY E+ PL+V AM GTGQ+PKF++DM+ ++LIPTSEV LT Sbjct: 180 IADILLKRH-EKHGYKEIFCPLIVNKSAMLGTGQLPKFSEDMYQV-GEQYLIPTSEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+++EI+ LPL++T+ FR EAGSAGRDT+GM+R HQF K ELV IT + S Sbjct: 238 NLHANEILTYDMLPLKYTSFTQCFRQEAGSAGRDTKGMIRLHQFNKVELVKITHPDQSMN 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E ++ AE++L DL YRVV LC+GD+GFS+ KTYDLEVW QN YREISSCS C Sbjct: 298 ELESLVKDAEDVLNMFDLPYRVVELCSGDIGFSSAKTYDLEVWFPEQNKYREISSCSNCT 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+R + +R++D + K +K HTLNGSGVA+ R + ILENY + + V +PT+L+PY Sbjct: 358 DFQARNIQTRFKDKDGK-IKLVHTLNGSGVAIDRLIATILENYWDGEKLV-LPTILKPYF 415 Query: 418 NNLAVIK 424 +N +K Sbjct: 416 DNKEFLK 422 >gi|218129700|ref|ZP_03458504.1| hypothetical protein BACEGG_01279 [Bacteroides eggerthii DSM 20697] gi|317475947|ref|ZP_07935202.1| seryl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] gi|217988112|gb|EEC54436.1| hypothetical protein BACEGG_01279 [Bacteroides eggerthii DSM 20697] gi|316907879|gb|EFV29578.1| seryl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 424 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 154/427 (36%), Positives = 232/427 (54%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I N + + L+K+H + E +L + K R ++ + NS S Sbjct: 1 MLTIKQITDNTDAVIRGLEKKHFKNAKETIGQVLETNNKRRNTQTILDKNLSEVNSLSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + KN + LKE L++E + + L+ L+ IPN+P + VP G Sbjct: 61 IGLLMKEGKKDEAETAKNRVAELKEANKALQEEMDQAATDLQNLLYTIPNIPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GADDNVVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML+ E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 ESHQEMLNHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRTAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVI 423 VI Sbjct: 418 T-GFEVI 423 >gi|170780874|ref|YP_001709206.1| seryl-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|189083563|sp|B0RCF1|SYS_CLAMS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|169155442|emb|CAQ00549.1| seryl-tRNA synthase [Clavibacter michiganensis subsp. sepedonicus] Length = 426 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 149/427 (34%), Positives = 239/427 (55%), Gaps = 10/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D Q +R +P+ + + + R + + ++ D + R I + E +RA +N++ + Sbjct: 1 MIDPQTLRDHPDLVIASQELRGASVEVVDQAVAADSERRQAITEFEGLRAEQNAHGKLVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + + L E LK ++ ++ + ++L + + IPN+ ++ VP Sbjct: 61 KA----DKADKPRLIAEVQELKARVTAAQERAQQAEAALDEAMRRIPNIVIDGVP-AGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ L+R VG+K + R+H EIGE L +D R K+SGARF L G A LE AL Sbjct: 116 DDWALLREVGEKAAFDFEPRDHLEIGEILDAIDMGRGAKVSGARFHFLKGIGARLEIALM 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 F + E G + P LV+ E M GTG + AD+++ D +L TSEV+L Sbjct: 176 NFGLARAL-EAGLVPLITPTLVKPEIMAGTGFLGAHADEVYHLDDDDLYLTGTSEVALAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + P+R+ + +R EAGS G+DTRG++R HQF K E+ S D+ E Sbjct: 235 YHADEILDLAAGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQKLEMFSYVDPADAEAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HER+L+ E +++ L L YRV+ GDLG SA + YD+E W+ Q YRE++S S C Sbjct: 295 HERLLAMQERMMQDLGLAYRVIDTAAGDLGSSAARKYDVEAWIPTQGAYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +R+R + + TLNG+ +A R ++AILE + ADGSV +P LRPY+ Sbjct: 355 FQARRLGTRFRGEDGR-TSPVATLNGT-LATTRWIVAILETHQRADGSVRVPEALRPYLG 412 Query: 419 NLAVIKK 425 L V++ Sbjct: 413 GLEVLEP 419 >gi|228470329|ref|ZP_04055233.1| seryl-tRNA synthetase [Porphyromonas uenonis 60-3] gi|228308072|gb|EEK16947.1| seryl-tRNA synthetase [Porphyromonas uenonis 60-3] Length = 424 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 242/427 (56%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I+ I +P+ + L +H + I++ D+ R K +D A++ S I Sbjct: 1 MLTIKQILDDPQGVIERLAVKHFPAEEPIAAIIAQDKLRRDAQHKKDDSLAQQKLLSRSI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ + G + LK E TLKE E+ + ++++L+ +PN+P +VP GTS Sbjct: 61 GEKMKAGAREEAEQLKAEVQTLKEISKQAEETMRQAEETMRQLLLSVPNLPHPDVPHGTS 120 Query: 119 ANENILIRSVGKKPSAIHLSR-EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N+ + + G+ P ++ H+E+ + L+DF+ K++GA F V G A L+RA Sbjct: 121 AEDNLCVATGGEMPHLEGTAKLPHWELAKQYDLIDFELGVKITGAGFPVYRGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D T G+ EV P++V + + GTGQ+P M+ D +LIPT+EV + Sbjct: 181 LINFFLDRAT-AAGFMEVEPPIMVNEASGIGTGQLPDKEGQMYHAQLDNLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ I+E+ LP+ T P FR EAGS G+D RG+ R HQF K E+VSI R + S+ Sbjct: 240 TNIFRDVILEADQLPICCTAYTPCFRREAGSYGKDVRGLNRLHQFDKVEIVSIDRPDHSW 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ++M++ + +++ L+L YR++ LC GDL F++ TYD EV+ A Q + E+SS S Sbjct: 300 QQLDKMIAHVKSLVEELELPYRILRLCGGDLSFTSAMTYDFEVFSAAQERWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RYRDP + HTLNGS +A+ R + A+LEN +G + IP LRPY Sbjct: 360 ESYQANRLMCRYRDPEEG-ITLCHTLNGSALALPRIVAALLENNQTPEG-IIIPKALRPY 417 Query: 417 MNNLAVI 423 I Sbjct: 418 T-GFDKI 423 >gi|225450981|ref|XP_002284787.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296088317|emb|CBI36762.3| unnamed protein product [Vitis vinifera] Length = 447 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 140/436 (32%), Positives = 217/436 (49%), Gaps = 17/436 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ NPE + + ++R+ + + ++ LD++ R + E++R N + Sbjct: 1 MLDINLFREDKGHNPEIIRESQRRRYANVELVDEVIHLDKEWRQRQFEYENLRKEFNKIN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q+ + G + T K E E E ++L + I N+ + VP+ Sbjct: 61 KQVAKLKISG--EDASEMIKSTDENKRLTSKKEAEVQEALAALNSKLEIIGNLVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N +IRS G+K L + H E+ E LG+ D + ++G R L G L Sbjct: 119 SNDEANNAVIRSWGEKKVEPKL-KNHVELVELLGIADLKKGANIAGGRGFYLKGDGVRLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +AL F +D + GYT + P +R + M Q+ +F ++++ T D ++LI T+ Sbjct: 178 QALINFGLDF-LEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATA 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LPLR+ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 237 EQPLCAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSP 296 Query: 293 E--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 DS+ HE M+ +E+ K L++ Y+VV++ +G L +A K YDLE W YRE+ Sbjct: 297 NGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEGWFPASQTYREL 356 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C ++QSRR+ RY + N + ++ H LN + A R + ILENY DG V Sbjct: 357 VSCSNCTDYQSRRLEIRYGQKKSNEQIKQYVHLLNSTLTATERTICCILENYQKEDG-VE 415 Query: 409 IPTVLRPYMNNLAVIK 424 +P LRP+M + Sbjct: 416 VPEPLRPFMGGKTFLP 431 >gi|225012231|ref|ZP_03702668.1| seryl-tRNA synthetase [Flavobacteria bacterium MS024-2A] gi|225003786|gb|EEG41759.1| seryl-tRNA synthetase [Flavobacteria bacterium MS024-2A] Length = 423 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 154/426 (36%), Positives = 234/426 (54%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML +Q+IR+N E + L+KR+ + + I+ LD++ R ++ AR N + +I Sbjct: 1 MLALQFIRENKEVILKGLEKRNFKHPELIDAIIDLDQERRSQQATLDQHLARANQLAKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G G + LK ET++LK Q L+++ E SL +L + IPN+P E VP GT+ Sbjct: 61 GGLFKSGEIEKATVLKEETASLKTQTKTLQEKLQETSDSLFELRTQIPNIPHESVPSGTN 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N I G P + H+E+ L+DF+ +K++GA F V G A L+R L Sbjct: 121 EEDNEEIFKSGSIPKLDDKALPHWELASKYDLIDFELGSKITGAGFPVYKGKGARLQRGL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLT 237 + +D +T GY E+ P LV + + +GTGQ+P M+ + +LIPT+EV LT Sbjct: 181 INYFLDQNT-AAGYKEMQVPHLVNEASGFGTGQLPDKEGQMYHVQNDDLYLIPTAEVPLT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY + +++ LP+ T P FR EAGS G RG+ R HQF K E+V I +++ Sbjct: 240 NLYRNTLLDISELPICLTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEEPKNAMQ 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 ++M+ + IL L+L YR++ LC GD+GF++ TYD E++ Q + EISS ST Sbjct: 300 ALDQMVEHVKSILNALELPYRILRLCGGDIGFTSALTYDFEIYSTAQERWLEISSVSTFN 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+ R+ RY+D HTLNGS +A+ R + +LEN +G + IP L PY Sbjct: 360 SFQAERLQLRYKDKTGNKQN-VHTLNGSSLALPRVVAGLLENCQTPEG-IMIPKALVPYT 417 Query: 418 NNLAVI 423 I Sbjct: 418 -GFDRI 422 >gi|295396631|ref|ZP_06806785.1| serine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] gi|294970515|gb|EFG46436.1| serine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] Length = 428 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 150/431 (34%), Positives = 240/431 (55%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D+ +R+NPE + + R + + I++ D R I + E+IRA++ + ++ Sbjct: 1 MIDLVQLRENPEIFKASQRARGASVELVDQIVAADSARRSAIAEFEEIRAQQKAFGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +E + L E + +++ L+ + E + ++++ +PN+ ++ VP G Sbjct: 61 ---SEKDKDAKAKLVAEAKEMSDRVKALQADNDEAQQNFERILMKLPNLIIDGVPSGGEE 117 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + L R +V + +H EIGE L +D R K+SG+RF LTG A LE A Sbjct: 118 DSVELRREGTVRDFSTDGFEPVDHLEIGERLNAIDTTRGAKVSGSRFHFLTGFGARLEMA 177 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L +D G+T + P LV+ E M GTG + + AD+++ D +L+ TSEV L Sbjct: 178 LLNLAMDTAI-SAGFTPMVVPTLVKPEVMGGTGFLGEHADEVYRLEADDLFLVGTSEVPL 236 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EII+ P+RF ++ +R EAGS G+DTRG++R HQF K E+ S ++D+ Sbjct: 237 AGYFMDEIIDLSDGPIRFGGISSCYRREAGSYGKDTRGIIRVHQFQKVEMFSYVHQDDAE 296 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH RMLS E++L+ +L YRV+ + GDLG SA + YD E W+ QN YRE++S S C Sbjct: 297 DEHLRMLSLQEQMLQACELPYRVIDIAAGDLGDSAARKYDCEAWVPTQNTYRELTSTSNC 356 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR+ R R + +++ TLNG+ +A R L+ ILEN+ ADGSV IP L+PY Sbjct: 357 TSFQARRLKIRERTSDGQTV-PVATLNGT-MANTRWLVPILENHQQADGSVAIPAALQPY 414 Query: 417 MNNLAVIKKEH 427 + + + Sbjct: 415 LGGMKAYGPDG 425 >gi|167765169|ref|ZP_02437282.1| hypothetical protein BACSTE_03555 [Bacteroides stercoris ATCC 43183] gi|167696797|gb|EDS13376.1| hypothetical protein BACSTE_03555 [Bacteroides stercoris ATCC 43183] Length = 424 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 231/427 (54%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I N + + L+K+ + + E +L + K R ++ + NS S Sbjct: 1 MLTIKQITDNTDAVIRGLEKKHFKNAKETIEQVLETNNKRRNTQTILDKNLSEVNSLSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + KN + LKE L++E + + L+ L+ IPNVP + VP G Sbjct: 61 IGMLMKEGKKDEAETAKNRVAELKEANKALQEEMDQAATDLQNLLYTIPNVPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GADDNVVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 ESHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRTAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVI 423 +I Sbjct: 418 T-GFEMI 423 >gi|329957008|ref|ZP_08297576.1| serine--tRNA ligase [Bacteroides clarus YIT 12056] gi|328523765|gb|EGF50857.1| serine--tRNA ligase [Bacteroides clarus YIT 12056] Length = 424 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 234/427 (54%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I N + + L+K+H + E +L ++K R ++ + NS S Sbjct: 1 MLTIKQITDNTDAVIRGLEKKHFKNAQETIGQVLETNDKRRNTQTILDKNLSEVNSLSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG +A K+ + LKE L++E + + L+ L+ IPN+P + VP G Sbjct: 61 IGLLMKEGKKDEAEAAKSRVAELKEANKALQEEMDQAATDLQNLLYTIPNIPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GADDNVVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML+ E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 ESHQEMLNHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRTAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVI 423 +I Sbjct: 418 T-GFEMI 423 >gi|283768642|ref|ZP_06341554.1| serine--tRNA ligase [Bulleidia extructa W1219] gi|283105034|gb|EFC06406.1| serine--tRNA ligase [Bulleidia extructa W1219] Length = 428 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 127/430 (29%), Positives = 215/430 (50%), Gaps = 7/430 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI+ IR + E + +KK+ + P + + LD+K R + + +R RN S + Sbjct: 1 MIDIELIRNHQEVVKENIKKKFQDQKLPLVDEVYELDKKFRAAKTEGDQLRGDRNRISKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + + +A K + +++ LE EE E+ ++K + IPN+ VPIG Sbjct: 61 IGVFMRQKEFDKAEAAKQSVKDIDQRITDLEAEEKEMEVEIRKRMMVIPNIIDPTVPIGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ + H +I ++ D + A + SG F L G +A L + Sbjct: 121 DDSENVEIEKYGEPLIPDYEIPYHADIFQSFDGFDSESAGRTSGNGFYYLQGDVARLHSS 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D +HG+T V P ++ + G + + M+ + +LI TSE S+ Sbjct: 181 IISYARDFMI-DHGFTYVIPPFMIHSNVVTGVMSFDEMENMMYKIDGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + ++++ + LP T+ +P FR E G+ G + RG+ R HQF K E+V + +DS Sbjct: 240 IGKFMGQMVKEEDLPRALTSYSPCFRKEVGAHGIEERGVYRVHQFEKQEMVVVCHPKDSA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ++++ + + + L++ R + C+GDL K+ D+E W Q Y E+ SCS Sbjct: 300 YWYDQLWKNSVDFFRSLEIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G Q+RR++ R + N HTLN + VA R LIA EN+ +G +TIP L+PY Sbjct: 360 GEAQARRLSIRIKGKNGN--YLAHTLNNTVVASPRALIAFFENHYQKNGDITIPKALQPY 417 Query: 417 MNNLAVIKKE 426 M VI + Sbjct: 418 MGGQEVIHPK 427 >gi|312130764|ref|YP_003998104.1| seryl-tRNA synthetase [Leadbetterella byssophila DSM 17132] gi|311907310|gb|ADQ17751.1| seryl-tRNA synthetase [Leadbetterella byssophila DSM 17132] Length = 423 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 145/427 (33%), Positives = 230/427 (53%), Gaps = 9/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I +I+ N E LKK+H E + L +D + + + ++++ A+ N + + Sbjct: 1 MLQINYIKDNLERTIAGLKKKHFKDAELVVQQALDVDSQRKDIQVRLDNTLAQANGLAKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + G + LK +T+ LKE LE + +L++++ +PN+P E VP G Sbjct: 61 IGGLMKAGQKEEAEKLKAQTAELKEVSKDLEAALKKAEDTLQEILVTLPNLPHESVPEGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +A +N+ + G P + H+++ + ++DF+ K+SGA F G A ++RA Sbjct: 121 TAEDNLEVEKGGTVPELSADALPHWDLIKKYDIIDFELGNKVSGAGFPFYKGKGAKIQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L F ++ + GY EV P+++ + +GTGQ+P M+ T D +LIPT+EV + Sbjct: 181 LINFFLNE-AEKAGYFEVQPPIVINAASGFGTGQLPDKEGQMYHATADDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+ LP + P FR EAGS G RG+ R HQF K E+V IT E S+ Sbjct: 240 TNMYRDVILSENELPKKNVAYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVQITTPEKSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E ML+ +L++L L YR++ LC GD+ F++ TYD EV+ A Q + E+SS S Sbjct: 300 DALEEMLNHVRGLLEKLQLPYRILKLCGGDMSFTSALTYDFEVYSAAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RY+ + HTLNGS +A+ R L AILEN + G + +P VL+ + Sbjct: 360 ETYQANRLKLRYKV--DGKSQLLHTLNGSALALPRILAAILENNQSPSG-IKVPEVLQAF 416 Query: 417 MNNLAVI 423 I Sbjct: 417 C-GFDKI 422 >gi|311897478|dbj|BAJ29886.1| putative seryl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 426 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 143/429 (33%), Positives = 234/429 (54%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R +PE + + + R + + +LS DE+ R + +++RA + Q+G Sbjct: 1 MIDLRLLRDDPERVRSSQRSRGEDVDLVDALLSADERRRASGTRFDELRAEQ----KQLG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A AL T L ++ + + E ++L + N+ P+G Sbjct: 57 KLVAAAKGEEKAALLARTKELAAEVKAADTAQGEAKEEAERLQRALANLIDPAAPVGGEE 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + L + + R+H E+G LG +D +R K++GAR LTG A LE A Sbjct: 117 DFVTLEEVGTPRDFAAEGFEPRDHVELGRLLGAIDTERGAKVAGARSYYLTGPGALLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L + G+T + P LVR AM GTG + + A++++ D R+L+ TSEV L Sbjct: 177 LVNMAMAQ-AGAAGFTPMITPALVRPAAMDGTGFLGQAAENVYYLADDDRYLVGTSEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + EI+++ LPLR+ + FR EAG+ G+DTRG++R HQF K E+ T ED+ Sbjct: 236 AAYHMDEILDADKLPLRYAGFSSCFRREAGTYGKDTRGIIRVHQFEKVEMFVFTTPEDAE 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L ++ L L+L YRV+ + +GDLG SA + +D+E W+ Q YRE++S S Sbjct: 296 AEHRRLLQWEKDFLNALELPYRVIDVASGDLGSSAARKFDIEAWVPTQGRYREVTSTSNT 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+RR+ R RD + ++ TLNG+ VAV R ++A+LEN+ DGSV +P LRP+ Sbjct: 356 TEYQARRLAIRMRDADG--VRPLATLNGTLVAVPRVIVALLENHQLPDGSVALPEALRPF 413 Query: 417 MNNLAVIKK 425 + +V++ Sbjct: 414 LGGKSVLEP 422 >gi|295695170|ref|YP_003588408.1| seryl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295410772|gb|ADG05264.1| seryl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 428 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 156/429 (36%), Positives = 242/429 (56%), Gaps = 9/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ+IR++P+ + A + + + + +L +DE+ R L+ +IE++RA+RN S + Sbjct: 1 MLDIQYIRRHPDRVQKAARDKGISFDVQDLLEVDERRRQLLGQIEELRAQRNQKSKRTPT 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + E L E++ LE E V + ++L+ P VP ++VP+G S Sbjct: 61 LQGEEKQLNI----AEVRQLNERIKGLEDELDTVKNRYEELMLRAPAVPFDDVPVGESDA 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ P R+H +GE L+D R K++G+R L A L RA+ Q Sbjct: 117 DNVEVRREGQAPIFSFPVRDHVTLGEMHDLIDIPRGVKIAGSRMYFLKNEAALLHRAVIQ 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTNL 239 +D H G+T + P++VRD AM+GTG P + + + L+ T+EV L + Sbjct: 177 LAVD-HLVAKGFTPMIVPVMVRDRAMFGTGYFPLGKEQTYVIPEDELNLVGTAEVPLVSY 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE- 298 Y+ E++ + LP R ++ FR E GSAG+DTRG+ R HQF K E V ITR + Sbjct: 236 YADEVLSEEELPKRMLGISNCFRREVGSAGKDTRGLYRVHQFTKVEQVVITRADGDEAMR 295 Query: 299 -HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H +L AEE+L+ L+L YRVV +CTGD+G K +D+E W+ +N Y E SCS+ Sbjct: 296 LHWELLHNAEELLRLLELPYRVVEVCTGDMGQGQVKKHDIETWMPSRNAYSETHSCSSFL 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RYRD + + L + +TLN + +A R LI +LE + DGS+ IP LRPY+ Sbjct: 356 DFQARRSGLRYRDGDGQ-LHYCYTLNNTAIASPRILIPLLEVHQQEDGSIHIPAALRPYL 414 Query: 418 NNLAVIKKE 426 ++ + Sbjct: 415 GGREWLRPK 423 >gi|15240939|ref|NP_198099.1| seryl-tRNA synthetase / serine--tRNA ligase [Arabidopsis thaliana] gi|2501056|sp|Q39230|SYS_ARATH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|13507571|gb|AAK28648.1|AF360352_1 putative seryl-tRNA synthetase [Arabidopsis thaliana] gi|1359497|emb|CAA94388.1| seryl-tRNA Synthetase [Arabidopsis thaliana] gi|15293241|gb|AAK93731.1| putative seryl-tRNA synthetase [Arabidopsis thaliana] gi|332006309|gb|AED93692.1| seryl-tRNA synthetase [Arabidopsis thaliana] Length = 451 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 133/440 (30%), Positives = 219/440 (49%), Gaps = 18/440 (4%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ NPE + + ++R + + I+ LD++ R +++ R N + Sbjct: 1 MLDINLFREEKGNNPEIIRESQRRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q+ Q + +T K+ E E E ++LK + + N+ + VP+ Sbjct: 61 KQVAQLK--IKKEDASEIIQQTEKNKQDSTAKEAEVREAYAALKAKLEQVGNLVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 N++I+ G+K + + H ++ E LG+ D R +++GAR L G Sbjct: 119 DKDEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLM 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIP 230 L +AL F + + G+T + P +R + M Q+ +F ++++ T D ++LI Sbjct: 179 LNQALINFGLTF-LKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIA 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+E L + E I LPLR+ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 238 TAEQPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCIT 297 Query: 291 REED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + S+ + M+ +E+ + L L Y++VS+ +G L +A K YDLE W +R Sbjct: 298 GPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFR 357 Query: 349 EISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 E+ SCS C ++Q+RR+ RY + N ++ ++ H LN + A R + ILENY DG Sbjct: 358 ELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDG- 416 Query: 407 VTIPTVLRPYMNNLAVIKKE 426 V IP VL+P+M + + Sbjct: 417 VDIPEVLQPFMGGETFLPFK 436 >gi|327400152|ref|YP_004340991.1| Seryl-tRNA synthetase [Archaeoglobus veneficus SNP6] gi|327315660|gb|AEA46276.1| Seryl-tRNA synthetase [Archaeoglobus veneficus SNP6] Length = 453 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 148/448 (33%), Positives = 234/448 (52%), Gaps = 28/448 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R+NPE L + ++R + E + LD+ R + ++ ++R RN SA I +A Sbjct: 5 LKALRENPEILMESQRRRGESTEIVERAIELDKLWRQKLHELNNLRHERNKLSAAIKKAS 64 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 L E + E++ E+E ++ L +++ IPN+ E VPIG EN Sbjct: 65 K----DERAKLIEEAKKIAEKVKAGEEELKKLEEELNRVLLSIPNILHESVPIGKDDTEN 120 Query: 123 ILIRSVGKKPSAIHLSREHF--------------------EIGEALGLMDFDRATKLSGA 162 + IR GK E + E G D +RA K++G+ Sbjct: 121 VPIRFWGKPKVYREHVEEFIKQTGGNIDYDVIDRLPVGHADAVETWGWADIERAAKVAGS 180 Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 RF L L L+ AL + +D + G+ VS P ++R +A G + F + ++ Sbjct: 181 RFYYLLNDLVWLDFALISYALDFLAKQ-GFRIVSPPYMMRRQAYEGVTALGDFEEVIYKV 239 Query: 223 T-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + +LI TSE L ++ +E+I LPL + ++P FR EAG+ G+DT+G+ R HQF Sbjct: 240 EGEDLFLIATSEHPLAAMHMNEVIAEDDLPLLYAGVSPCFRKEAGAHGKDTKGIFRVHQF 299 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E E+S+ HE+++ AE++ + L++ YR+V++CTGD+G A K YDLE W+ Sbjct: 300 NKVEQFVYCLPEESWEWHEKLIENAEKLWQGLEIPYRIVNICTGDIGIVAAKKYDLEAWM 359 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK-FTHTLNGSGVAVGRCLIAILENY 400 Q YRE+ SCS C ++QS R+N RY + K K F HTLN + +A R + AI+EN+ Sbjct: 360 PAQGKYREMVSCSNCTDWQSYRLNIRYAEEKGKPSKGFVHTLNSTAIATTRAITAIIENF 419 Query: 401 LNADGSVTIPTVLRPYMNNLAVIKKEHI 428 DG V IP VLR Y+ + KE++ Sbjct: 420 QLEDGRVEIPKVLRKYLEPIEAAPKEYL 447 >gi|304382010|ref|ZP_07364563.1| serine--tRNA ligase [Prevotella marshii DSM 16973] gi|304336808|gb|EFM03031.1| serine--tRNA ligase [Prevotella marshii DSM 16973] Length = 429 Score = 349 bits (896), Expect = 5e-94, Method: Composition-based stats. Identities = 155/432 (35%), Positives = 238/432 (55%), Gaps = 7/432 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I EH+ L+K+H E +L+ D++ R ++++ + N + Q Sbjct: 1 MLTLKQISTETEHVIQGLEKKHFNGAREAVEQVLATDKRRREAQQRLDSNKQEANVLAKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + E A+K S+LK L +E L L+ IPN+P +EVP GT Sbjct: 61 IGALMKENRHEEAAAVKERVSSLKTVDKELAEEMAATEQELTTLLCTIPNIPADEVPEGT 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N +++ G++P + H+++ L+DFD K++GA F V G +A L+RA Sbjct: 121 GADDNKVVKEGGERPVLPTDALCHWDLCRKYNLIDFDLGVKITGAGFPVYIGKMARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GY EV P +V ++ YGTGQ+P M C TD +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPFVVNRDSGYGTGQLPDKEGQMYHCETDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ I++ LP++ + FR EAGS G+D RG+ R HQF K ELV I R E S Sbjct: 240 TNMFRDVILDESDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVELVRIDRPEHSA 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 ML E + ++L+L YR++ LC GD+ F++ YD EV+ A Q + E+SS S Sbjct: 300 NSLREMLDHVESLCRKLELPYRILLLCGGDMSFTSHICYDFEVFSAAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RYR +K + HTLNGS +A+ R + AILEN ++G + +P VL PY Sbjct: 360 ASYQANRLKCRYRPAGAKKPELCHTLNGSALALPRIVAAILENNQTSEG-IRVPHVLVPY 418 Query: 417 MNNLAVIKKEHI 428 I +H+ Sbjct: 419 C-GFEWIDDKHV 429 >gi|328948174|ref|YP_004365511.1| Seryl-tRNA synthetase [Treponema succinifaciens DSM 2489] gi|328448498|gb|AEB14214.1| Seryl-tRNA synthetase [Treponema succinifaciens DSM 2489] Length = 445 Score = 349 bits (896), Expect = 5e-94, Method: Composition-based stats. Identities = 147/438 (33%), Positives = 244/438 (55%), Gaps = 18/438 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD ++I+ N E + + R+++P ++ ++ L ++ L ++++++ +RN+N+ Sbjct: 1 MLDYRFIKDNLEAVKKNIIDRNMDPAKADADLVVKLFDERTALTTELQNLQQKRNANA-- 58 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + E +K+ + E + E+ L++ IPN+ EVP+G Sbjct: 59 -AAMKQKLDPETRAKYIEEGKNIKDAVSSAESKLSELEVKLEEAGRQIPNMANPEVPVGK 117 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 EN+ ++ VG+ + H E+GE+L L+DF+R TK+SGA+F L LE++ Sbjct: 118 VDTENLEVKKVGQPRKFDFKPKSHVELGESLDLIDFERGTKVSGAKFYYLKNEAVFLEQS 177 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVS 235 L + +++ +HG+T P + R+E + G G P+ + +G L+ T+E++ Sbjct: 178 LIMYALNI-LRKHGFTTFITPDIAREEILKGIGFNPRGNESNVYAIEDEGTCLVATAEIT 236 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L +S EI++ LPL + L+ FR EAG+AG+ ++G+ R HQF K E+ E S Sbjct: 237 LGGYHSGEILDKSKLPLMYCGLSHCFRREAGAAGQFSKGLYRVHQFDKVEMFVYCLPEQS 296 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ-------NLYR 348 + HE++ EEI L L +RVV CTGDLG A + +DLE W+ G+ Y Sbjct: 297 DSLHEKLRLIEEEIFSGLGLPFRVVDTCTGDLGAPAYRKWDLEAWMPGRADENHPDGDYG 356 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 E++S S C ++Q+RR+N +Y D + K+ K+ H LNG+ VAVGR +++ILENY N DGSVT Sbjct: 357 EVTSTSNCTDYQARRLNVKYHDDDGKN-KYVHMLNGTAVAVGRAMLSILENYQNEDGSVT 415 Query: 409 IPTVLRPYMNNLAVIKKE 426 IP VL PY I + Sbjct: 416 IPEVLVPYC-GFDKIGPK 432 >gi|313206450|ref|YP_004045627.1| seryl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|312445766|gb|ADQ82121.1| seryl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|315023609|gb|EFT36613.1| seryl-tRNA synthetase [Riemerella anatipestifer RA-YM] gi|325336105|gb|ADZ12379.1| Seryl-tRNA synthetase [Riemerella anatipestifer RA-GD] Length = 422 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 149/419 (35%), Positives = 243/419 (57%), Gaps = 6/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML +Q++R+ + LKKR+ + + ++ D++ + + ++++ A+ N S +I Sbjct: 1 MLQVQFLREQKSRVLEGLKKRNFKELNLVDEAIATDDERKKIQYELDENLAQMNKISKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + EG + K +T K++ L++ E SL ++ IPN+P + V G+S Sbjct: 61 GLLMKEGKKQEAEEAKTKTGEFKQKSQDLQQLLKEKEESLLNILYQIPNIPADIVKAGSS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A++N ++ + H+E+ + L+DF+ K++GA F V G A L+RAL Sbjct: 121 ADDNEVVYQSCDTFEMGTEALPHWELAKKYNLIDFELGVKIAGAGFPVYLGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 QF +D +T + GY EV+ P +V + + YGTGQ+P M+ D +LIPT+EV +T Sbjct: 181 VQFFLDKNT-DAGYLEVNPPHVVNEASGYGTGQLPDKEGQMYFVNEDNLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y I+E K LP++ T + +R EAGS G D RG+ R HQF K E+V + + E+S+T Sbjct: 240 NIYRDVILEEKKLPVKNTAFSQCYRREAGSYGADVRGLNRLHQFEKVEIVRLEKPENSYT 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M++ + IL+ L+L +R++ LC GD+GF++ TYD EVW A Q + E+SS S Sbjct: 300 ALDEMVAHVKSILEDLELPFRILRLCGGDMGFTSALTYDFEVWSAAQQRWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+ R+ RY+ + K + HTLNGS +A+ R + A+LEN +G V IP LR Y Sbjct: 360 SFQANRLKCRYKSGDDK-PQLVHTLNGSAMALPRVMAALLENNQTEEG-VKIPEKLRAY 416 >gi|297812971|ref|XP_002874369.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata] gi|297320206|gb|EFH50628.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata] Length = 451 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 134/440 (30%), Positives = 219/440 (49%), Gaps = 18/440 (4%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ NPE + + ++R + + I+ LD++ R +++ R N + Sbjct: 1 MLDINLFREEKGNNPEIIRESQRRRFASVEVVDEIIKLDKEWRQRQFEVDSFRKEFNKLN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q+ Q + +T K+ E E E ++LK + + N+ + VPI Sbjct: 61 KQVAQLK--IKKEDATEIIQQTEKNKQDSTAKEAEVREAYAALKAKLETVGNLIHDSVPI 118 Query: 116 GTSANENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 N++I+ G+K + + H ++ E LG+ D R +++GAR L G Sbjct: 119 DKDEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLM 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIP 230 L +AL F + + G+T + P +R + M Q+ +F ++++ T D ++LI Sbjct: 179 LNQALINFGLTF-LKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIA 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+E L + E I LPLR+ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 238 TAEQPLCAYHLDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCIT 297 Query: 291 REED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + S+ + M+ +E+ + L L Y++VS+ +G L +A K YDLE W +R Sbjct: 298 GPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFR 357 Query: 349 EISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 E+ SCS C ++Q+RR+ RY + N ++ ++ H LN + A R + ILENY DG Sbjct: 358 ELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDG- 416 Query: 407 VTIPTVLRPYMNNLAVIKKE 426 V IP VL+P+M + + Sbjct: 417 VDIPEVLQPFMGGETFLPFK 436 >gi|256831515|ref|YP_003160242.1| seryl-tRNA synthetase [Jonesia denitrificans DSM 20603] gi|256685046|gb|ACV07939.1| seryl-tRNA synthetase [Jonesia denitrificans DSM 20603] Length = 426 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 142/429 (33%), Positives = 228/429 (53%), Gaps = 9/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + R +P + IL D + R + + E +RAR+ S + Sbjct: 1 MIDLRTLRENPDLVRQSQIARGDDPGIVDTILEADVRRRTALSEFEALRARQKSIGKDVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A +L+ K + +KE + + E+ + L ++ + + P+ Sbjct: 61 RASGSEKDALLTETKQIAAKVKELNQVQQDANEELNTLLLQVANIVEGAPVGGEEDYIVL 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 R + + ++H IGE L +D +R K+SG+RF LTG A LE AL Sbjct: 121 RHEGQPRDFTAEGMS---PKDHLAIGEGLRAIDTERGAKVSGSRFYYLTGIGARLELALL 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 +D G+T + P +V + M GTG + AD+++ D ++L+ TSEV+L Sbjct: 178 NAAVD-QAVAAGFTPMITPTIVNPDVMRGTGFLGAHADEIYYLGADDQYLVGTSEVALAG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ + PLR+ + +R EAGS G+D RG++R HQF K E+ S D+ E Sbjct: 237 YHSKEIVDLSNGPLRYAGWSACYRREAGSHGKDVRGIIRVHQFHKVEMFSYCTPADAEAE 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L+ EE+LK+ +L YRV+ GDLG SA + +D E WL Q Y E++S S C Sbjct: 297 HARLLAWEEEMLKKCELPYRVIDTAAGDLGSSAARKFDCEAWLPSQERYLELTSTSNCTT 356 Query: 359 FQSRRMNSRYRDPNSKS--LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR+ R R + TLNG+ +A R ++A+LEN+ ADGSV +P LRPY Sbjct: 357 FQARRLGVRERVEVDGKSETQTVATLNGT-LATTRWIVALLENHQQADGSVYVPVALRPY 415 Query: 417 MNNLAVIKK 425 + L V++ Sbjct: 416 LGGLEVLEP 424 >gi|332882901|ref|ZP_08450508.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679109|gb|EGJ52099.1| serine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 429 Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats. Identities = 144/422 (34%), Positives = 230/422 (54%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+ + E +L+ D+K R +++ + +AQ Sbjct: 1 MLTLKLINERTEWVIKGLEKKHFSGAKEAIENVLATDKKRREAQTQLDINLSESKKLAAQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + +G +++K E + LK+ L++ L L+ IPN+P + VP G Sbjct: 61 IGALMKQGKKEEAESIKTEVARLKDTNKALQEAMDRAQQELTTLLCAIPNIPYDIVPEGN 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++++ G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVVKMGGMETDLPKDALPHWELAKKYNLIDFDLGVKITGAGFPVYRGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY E+ P +V + + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYEEIMPPTVVNEASGYGTGQLPDKEGQMYHCNLDDFYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKDLPVKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSE 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML+ E +L++L+L YR++ LC GD+ F++ YD EV+ Q + E+SS S Sbjct: 300 QSHQEMLAHVEGLLQKLELPYRILRLCGGDMSFTSSICYDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + AI+EN +G + +P L PY Sbjct: 360 DTYQANRLKCRYRRTEDKKTELCHTLNGSALALPRIVAAIMENNQTPEG-IRMPKCLVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|254385101|ref|ZP_05000434.1| seryl-tRNA synthetase 2 synthetase 2 [Streptomyces sp. Mg1] gi|194343979|gb|EDX24945.1| seryl-tRNA synthetase 2 synthetase 2 [Streptomyces sp. Mg1] Length = 430 Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats. Identities = 178/433 (41%), Positives = 244/433 (56%), Gaps = 7/433 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D + + + L +R + L + I+ +++RA ++++ Q Sbjct: 1 MHDARALIEMGAEAVRRLARRGYSLDLSRLEDLQSRRNQSIRSADELRAEAKRVASEVQQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + LK LK+Q+ ++ ++ +V + L +L+ IPN+P + P G S Sbjct: 61 TAKQGG--DISKLKERARELKDQIRDIDADQEQVQAELTELLLTIPNLPDDAAPDGDSDE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + +R VG P+ ++H ++GE+ G++DF RATKLSG RF V G A LERAL Sbjct: 119 FAVEVRRVGTPPAFSFEPKDHVDLGESTGMLDFARATKLSGPRFVVSRGAGAALERALAT 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 +D+HT HGY E + P LV + M GTGQ+PKF +D+F T +LIPT+EV LT Sbjct: 179 LFLDIHTRRHGYVEHAVPYLVSRKTMTGTGQLPKFEEDLFKTGVADRELFLIPTAEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ EII LPL T P FRSEAGS GRDTRG++RQHQF K E+V + D+ Sbjct: 239 NLYADEIIPPTDLPLSLTAHTPCFRSEAGSYGRDTRGLIRQHQFAKVEIVQMVDPADADA 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ AE LK L L YRVV L GD GFSA TYD+EVW+ QN YREISS S G Sbjct: 299 TLETMVGHAEACLKELGLAYRVVKLAAGDTGFSAQLTYDIEVWIPSQNTYREISSISNFG 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR N R R + K K TLNGSG+ +GR + A+LE DGS+ +P L PY+ Sbjct: 359 TFQARRANIRTRGEDGK-PKLVATLNGSGLPIGRTVAALLEQCQQQDGSLVLPESLFPYL 417 Query: 418 NNLAVIKKEHILE 430 I + E Sbjct: 418 -GFRRISADGTPE 429 >gi|296454816|ref|YP_003661960.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296184249|gb|ADH01131.1| seryl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 428 Score = 349 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 137/431 (31%), Positives = 233/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +LS D R +K E+ RA++ +IG Sbjct: 1 MLDIQFIREHTDIVKESQRKRGESVELVDEVLSSDTVRREALKAFEEARAQQ----KEIG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A L ET L +++ + + + + N+ E P G Sbjct: 57 KKVASAPADEKAKLIAETKELSQKVSEYKSKADSAAEEYTTAMWKLSNIVEPEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D R K+ G+RF L G +A ++ A Sbjct: 117 DYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ +EI++ + PLR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 236 LAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EHE +L+ +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 CKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AI+EN+ DGS+ IP +R Sbjct: 356 CTEYQARRLNIRERMEDGG-TRPVSTLNGT-LATTRWLVAIMENHQQKDGSIEIPQAMRA 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|84495480|ref|ZP_00994599.1| seryl-tRNA synthetase [Janibacter sp. HTCC2649] gi|84384973|gb|EAQ00853.1| seryl-tRNA synthetase [Janibacter sp. HTCC2649] Length = 426 Score = 349 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 146/432 (33%), Positives = 230/432 (53%), Gaps = 14/432 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R NP+ + + + R + + +L+ +EK R + E +RA + + Q+ Sbjct: 1 MIDLKLLRDNPDRVRASQRARGEDESVVDAVLAAEEKRRNSLTAFEQLRAEQKAMGKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + AL T + Q+ + + E L +L I NV + VP+G Sbjct: 61 QAQGDEK----QALLARTKEISAQVKLNQTTADEAAGELDRLQRSIGNVIEDGVPVGGED 116 Query: 120 NENILIRS--VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L + ++H + E L +D +R K+SG+RF L G A LE A Sbjct: 117 DYVVLETIGAPRDFAAEGFEPKDHLTLFEGLDALDMERGAKVSGSRFYFLKGVGARLEMA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 + Q + E G+ + P LV+ E M G G I AD+++ D +L TSEV+L Sbjct: 177 MLQLAM-TKAIEAGFVPMITPTLVKAEVMAGAGFIDHHADEVYRLEADDLYLTGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 ++ EII+ P+RF + +R EAGS G+DTRG++R HQF K E+ R ED+ Sbjct: 236 AGYHADEIIDLAKGPIRFAGQSTCYRREAGSYGKDTRGIIRVHQFNKIEMFVYCRPEDAT 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+++L+ +E+L ++L YRV+ GDLG A + +D E W+ Q YRE++S S C Sbjct: 296 DEHQKLLAFEKEMLDLMELPYRVIDTAAGDLGGPAARKFDCEAWVPTQEKYRELTSTSNC 355 Query: 357 GNFQSRRMNSRYR---DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 FQ+RR+ +RYR D + TLNG+ +A R L+AILEN+ ADGS+T+P L Sbjct: 356 TTFQARRLKTRYRVSGDGGAGPTDTAATLNGT-LATTRWLVAILENHQQADGSITVPAAL 414 Query: 414 RPYMNNLAVIKK 425 RP++ L V+ Sbjct: 415 RPFI-GLDVLTP 425 >gi|313142486|ref|ZP_07804679.1| seryl-tRNA synthetase synthetase [Helicobacter canadensis MIT 98-5491] gi|313131517|gb|EFR49134.1| seryl-tRNA synthetase synthetase [Helicobacter canadensis MIT 98-5491] Length = 423 Score = 349 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 181/425 (42%), Positives = 260/425 (61%), Gaps = 20/425 (4%) Query: 9 QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 + E + L KR+++ E + + +E+++A++NS + Q EG Sbjct: 2 NDFEGVVAQLTKRNIDEVFLETLRQTHLNYKQKKIALEELQAKQNSKTKLFAQYKQEGK- 60 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 + LK E LK ++ + +E L++ IPN+P + PIG +N+ I+ Sbjct: 61 -DIQPLKKECDLLKAEITLYTQEIQGWEEKLQEFSHIIPNIPDSKTPIGKDEKDNVEIKK 119 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 + +EH+E+ E G +DF+R KL+ +RFSV G A LERAL +M+D +T Sbjct: 120 ILTPREFSFTPKEHWELAEQNGWIDFERGVKLAKSRFSVFMGMAAKLERALINYMLDFNT 179 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------------DGRWLIPTS 232 + G++EV P++V + ++GTGQ+PKF +D+F + +LIPT+ Sbjct: 180 -QRGFSEVGTPVIVNSQILFGTGQLPKFENDLFKISDFEEEELDSKEAKKGHELYLIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV+LTNLY++EI++ + LPL T P FR EAGSAGRDTRG++RQHQF K ELV+IT Sbjct: 239 EVTLTNLYNNEILKEEDLPLMMTAYTPCFRKEAGSAGRDTRGIIRQHQFDKVELVAITTP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 +DS ERM++CA ++L L L +R+V LC+GDLGFSA T D+EVWL GQN YREISS Sbjct: 299 QDSDIMQERMVACASDLLTSLGLPHRLVQLCSGDLGFSASNTIDIEVWLPGQNCYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S +FQ+RR RY+D N K+L HTLNGS +AVGR L+AI+ENY N DGS+ IP V Sbjct: 359 ISNTRDFQARRAKIRYKDSNKKNL-LVHTLNGSSLAVGRTLVAIMENYQNEDGSIEIPNV 417 Query: 413 LRPYM 417 L+PY+ Sbjct: 418 LQPYL 422 >gi|317123363|ref|YP_004097475.1| seryl-tRNA synthetase [Intrasporangium calvum DSM 43043] gi|315587451|gb|ADU46748.1| seryl-tRNA synthetase [Intrasporangium calvum DSM 43043] Length = 441 Score = 349 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 149/442 (33%), Positives = 236/442 (53%), Gaps = 20/442 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ +R P+ + + R +P + IL+ DE+ R + + E +RA + + S +G Sbjct: 1 MIDIKLLRDEPDRVRASQLARGEDPGIVDAILAADERRRSSLGEFETLRAEQKAVSKDVG 60 Query: 60 QAI------AEGNLSLVDALKN-------ETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 A+ + L++ + + L +Q+ LE E + L++L+ + Sbjct: 61 AAMGAFQRAKKAGAPDAAHLESVAHAARAKAAHLSDQVKALESNADEAGAELERLLRKVG 120 Query: 107 NVPLEEVPIGTSANENILIRS--VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 NV ++ VP G + ++ S +H +GE LG +D +R K+ GARF Sbjct: 121 NVIIDGVPTGGEDDYVVVETIGTPRDFASEGFEPLDHLALGERLGAIDMERGAKVGGARF 180 Query: 165 SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TT 223 LTG A LE AL + T G+T + P + R E M G G I AD+++ Sbjct: 181 YYLTGVGALLELALLNMAMAQAT-AAGFTAMITPTMARPEIMLGAGFIDAHADEVYRLEA 239 Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 D +L TSEV+L ++ EII+ + P R+ + +R EAGS G+DTRG++R HQF K Sbjct: 240 DDLYLTGTSEVALAGFHADEIIDLSAGPKRYAGWSACYRREAGSHGKDTRGIIRVHQFHK 299 Query: 284 CELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAG 343 E+ S R ED+ EH R+L E+L ++++ YR++ GDLG A + +D E W+ Sbjct: 300 VEMFSYCRPEDAEAEHGRLLDWEREMLAKIEVPYRIIDTAAGDLGSPAARKFDCEAWVPT 359 Query: 344 QNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 Q YRE++S S C +Q+RR+N+R RDPN + TLNG+ + R L+AILEN+ Sbjct: 360 QGKYRELTSTSNCTTYQARRLNTRERDPNGSGTRTVATLNGT-LGTTRWLVAILENHQQP 418 Query: 404 DGSVTIPTVLRPYMNNLAVIKK 425 DGSV +P LRP++ + V+K Sbjct: 419 DGSVVVPEALRPFL-GMDVLKP 439 >gi|284040464|ref|YP_003390394.1| seryl-tRNA synthetase [Spirosoma linguale DSM 74] gi|283819757|gb|ADB41595.1| seryl-tRNA synthetase [Spirosoma linguale DSM 74] Length = 423 Score = 349 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 156/427 (36%), Positives = 248/427 (58%), Gaps = 9/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML + +IR+N + + L KR + E + +++LD+K R K+++D+ A+ N+ ++Q Sbjct: 1 MLQLNFIRENKDTVLAGLGKRYFANAETVVDNVMTLDQKRRDTQKELDDVLAQSNAKASQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + G+ + +A K ET+ LK + L + ++ L+ ++ IPN+P VP G Sbjct: 61 IGALMKSGDKAAAEAAKAETAELKVRSKDLAEALRQIEVELQAVLVTIPNIPHSSVPPGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 SA++N ++ G KP+ ++ H+E+ + ++DF+ K++GA F V G A ++RA Sbjct: 121 SADDNEVVLEHGDKPTLHEAAQPHWELIKKYDIIDFELGVKIAGAGFPVYKGKGARIQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 + F +D + GY EV P+LV +++ +GTGQ+P M+ T D +LIPT+EV + Sbjct: 181 MINFFLDEAL-KAGYVEVQPPILVNEDSGFGTGQLPDKEGQMYFATEDKLYLIPTAEVPI 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+ LP++ P FR EAGS G RG+ R HQF K E+V I R E+S+ Sbjct: 240 TNIYRDVILNENQLPVKNVGYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVRIERPENSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E M + +L++L+L YRV+ LC GD+GF++ TYD+EVW A Q + E+SS S Sbjct: 300 AALEEMSLHVQSLLQKLELPYRVLRLCGGDMGFTSALTYDMEVWSAAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ R ++ HTLNGS +A+ R L +ILEN +G + IP VL PY Sbjct: 360 ETYQANRLKLR--SKLEGKMQLMHTLNGSALALPRILASILENNQTPEG-IKIPQVLVPY 416 Query: 417 MNNLAVI 423 VI Sbjct: 417 C-GFDVI 422 >gi|298253331|ref|ZP_06977123.1| seryl-tRNA synthetase [Gardnerella vaginalis 5-1] gi|297532726|gb|EFH71612.1| seryl-tRNA synthetase [Gardnerella vaginalis 5-1] Length = 428 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 137/431 (31%), Positives = 235/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L D+ R +K E+ RA + + ++ Sbjct: 1 MLDIQFIREHADVVKESQRKRGESVELVDEVLRSDDLRRTALKAFEEARAEQKAIGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A AE AL ET L ++ + E + + + + N+ +E P G Sbjct: 61 TASAEEK----AALIAETKELASKVAEYKAESEKATADYTTAMWKLSNIVEDEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D R K++G+RF L G +A L+ A Sbjct: 117 DYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EI++ + LR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 236 LAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++L +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 RAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AILEN+ + DGS+ IP ++ Sbjct: 356 CTEYQARRLNVRERMEDGG-TRPVSTLNGT-LATTRWLVAILENHQHEDGSIDIPKAMQA 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|308071421|ref|YP_003873026.1| Seryl-tRNA synthetase (serine--tRNA ligase) [Paenibacillus polymyxa E681] gi|305860700|gb|ADM72488.1| Seryl-tRNA synthetase (Serine--tRNA ligase) [Paenibacillus polymyxa E681] Length = 487 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 151/428 (35%), Positives = 235/428 (54%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR++ E + A + ++ +L LD++ + L++++E +R +RN S IG Sbjct: 59 MLDIKWIREHQEQVQTAADGKGIQVSVAELLILDDRRKQLLQEVEQLRQKRNQCSQDIGA 118 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 I G + K + + +L +LE + EV ++L+ +PN+ + P G S Sbjct: 119 LIHAGKSEQAEGAKRQVKEINGRLDLLEAPQQEVEEQFQQLLLLMPNIVSPDTPRGRSDE 178 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + VG P+ ++H +GE L+D R K +G R LTG L RA+ Q Sbjct: 179 DNVELEQVGSVPNFGFEPKDHMALGELHKLIDVPRGVKTAGTRNYYLTGAGVALHRAVQQ 238 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 +DL T G+ + PL+VR EAM TG P D + T + +WL+ TSEV L + Sbjct: 239 LAVDLLT-ARGFQLLDVPLMVRAEAMRSTGFFPLGLDQTYRITGEDQWLVGTSEVPLVSY 297 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 YS EI++ P+R ++ FR+E GSAGRD G+ R HQF K E V I + S Sbjct: 298 YSGEIVDVTD-PIRLAAVSVCFRNEVGSAGRDVHGLYRVHQFAKVEQVVICEASLDASEQ 356 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + + AE++L+ L+L YR +++CTGD+ K D+E W+ + Y E S S Sbjct: 357 MFQEITRNAEDLLQLLELPYRKMAVCTGDMAQKTYKQVDIETWMPSRQAYGETHSSSQLL 416 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N RYR+ + K L++ +TLN + VA R LI +LE++ DGS+ IP LRPYM Sbjct: 417 DFQARRSNIRYRNADGK-LQYCYTLNNTAVASPRILIPLLEHHQQEDGSIRIPEALRPYM 475 Query: 418 N-NLAVIK 424 + ++ Sbjct: 476 PRGMEFLR 483 >gi|218262762|ref|ZP_03477120.1| hypothetical protein PRABACTJOHN_02799 [Parabacteroides johnsonii DSM 18315] gi|218223164|gb|EEC95814.1| hypothetical protein PRABACTJOHN_02799 [Parabacteroides johnsonii DSM 18315] Length = 424 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 152/428 (35%), Positives = 233/428 (54%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + + + L+K+H + ++ L++K R +++ A N S Sbjct: 1 MLTLKVITEETDRVIRGLEKKHFKGAQESIAKVIELNDKRRGAQNQLDKNLAEVNQTSKT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + K + +KE ++ E + ++ L+ IPNVP +EVP G Sbjct: 61 IGMLMKEGKKEEAETAKQRVAEIKEANKAIQAEMDQAAEDMQNLLYTIPNVPYDEVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N + + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GADDNKVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGQGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 N+Q+ R+ RYRD N K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DNYQANRLKCRYRDEN-KKTQLCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVIK 424 +IK Sbjct: 418 T-GFDMIK 424 >gi|254168130|ref|ZP_04874977.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197622896|gb|EDY35464.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 442 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 155/447 (34%), Positives = 243/447 (54%), Gaps = 28/447 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ IR+N + + L+KR + + + IL D R +K+IE +R RN S +IG Sbjct: 1 MIDIKLIRKNGDMIRDMLRKRFKDEKIVDEILQYDNLWRETLKEIEKLRHERNKKSVEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + EG + LK+E L ++ LE+ E L+ +PN+ L++ P+ Sbjct: 61 KLVKEGK--DIKELKDEMKELNRRIKELEENVEEYKKRRDYLLMRLPNLLLDDTPVCEGE 118 Query: 120 NENILIRSVGKKPSAIHL-------------------SREHFEIGEALGLMDFDRATKLS 160 + ++R+ GK H +I E L D RA K++ Sbjct: 119 ENSPVVRTWGKARVMEDNMEYFKNCSAGMDYELIENKPESHVDIIEKYDLADTARAGKIA 178 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 GARF L L LE++L +F +D H GYT V+ PL++R AM G F + ++ Sbjct: 179 GARFYYLKNELVILEQSLIRFALD-HMVSKGYTPVTPPLMIRRAAMEGVIDFEAFEEMIY 237 Query: 221 CTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + ++I T+E L ++ EI++ SLPL++ ++P FR EAG+ G+DT+G+ R H Sbjct: 238 KIEGEDLYMIATAEHPLVAMHMKEILDPNSLPLKYVGISPCFRKEAGAHGKDTKGIFRVH 297 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 F+K E V ++ E+S E ++ AEEIL++L+L YRV+++C+G+LG A K YD+EV Sbjct: 298 NFYKVEQVVFSKPEESAILMEELIKNAEEILQKLELPYRVINICSGELGAVAAKKYDIEV 357 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q +RE+ SCS C +Q+RR+ RYRD LKF HTLN + +A R ++AI+EN Sbjct: 358 WMPAQQKFREVVSCSNCLEYQARRLMIRYRDKGE--LKFVHTLNSTALATTRIIVAIMEN 415 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKE 426 + D + IP L PY I+ E Sbjct: 416 FQ-EDKGIRIPKALVPYT-GFEYIEFE 440 >gi|237750627|ref|ZP_04581107.1| seryl-tRNA synthetase [Helicobacter bilis ATCC 43879] gi|229373717|gb|EEO24108.1| seryl-tRNA synthetase [Helicobacter bilis ATCC 43879] Length = 431 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 173/434 (39%), Positives = 256/434 (58%), Gaps = 20/434 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + Q+ +++ L R++E + + K + E ++A +N S + G Sbjct: 1 MIDVKLLLQDFDYVAQNLANRNVEKAMLDVLKENANKLKQQKNIAESMQAEQNKLSKEYG 60 Query: 60 QAIAEGNLSLV-DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + + + S + + K TLK ++ + + +L++++ IPN+ + PIGT Sbjct: 61 ELMRKKADSNLLQSHKENLDTLKRKVQEEVAKVAKAEVALQEILLKIPNLLDKNTPIGTD 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+N++I+ V + +EH+E+ E +DF+ KL+ +RFSVL G A L AL Sbjct: 121 ENDNVVIKHVLEPKKFDFTPKEHWELAEKNKWIDFEAGVKLAKSRFSVLRGEAARLNHAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------------- 223 +M+D + ++G+ S P++V + AM+GTGQ+PKFADDMF Sbjct: 181 ISYMLDFN-YKNGFEVCSVPVIVNERAMFGTGQLPKFADDMFHIESMNDDINESEDSNKG 239 Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 +LI TSE+SLTNLY I+ LP+ T P FR EAGSAGRDTRG++RQHQF K Sbjct: 240 HNLYLISTSEISLTNLYQDMILAENELPIMMTAYTPCFRKEAGSAGRDTRGIIRQHQFDK 299 Query: 284 CELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAG 343 ELV+IT E S + +RM+ ++L+ L+L +R+V LC+GD+GFSA T DLEVWL G Sbjct: 300 VELVAITTPEQSESMQQRMVDNVSKLLESLELPHRLVQLCSGDIGFSATNTIDLEVWLPG 359 Query: 344 QNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 QN YREISS S C +FQ+RR RY+ THTLNGS +AVGR L+AI+EN+ A Sbjct: 360 QNCYREISSVSNCADFQARRAKIRYKRA--GKNTLTHTLNGSSLAVGRTLVAIMENFQQA 417 Query: 404 DGSVTIPTVLRPYM 417 DGS+ IP VL Y+ Sbjct: 418 DGSIQIPKVLEKYL 431 >gi|163841951|ref|YP_001626356.1| seryl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] gi|162955427|gb|ABY24942.1| seryl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] Length = 446 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 154/430 (35%), Positives = 236/430 (54%), Gaps = 12/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + +NPE + + R + + I+S D+ + I E +RA +N+ ++ Sbjct: 21 MIDVKDLNENPEKYRASQRARGDKESMVDAIISADQSRKSAITSFEALRAEQNAFGKRVA 80 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E L + L ++ +L+ PN+ ++ VP G Sbjct: 81 AAKGEEKQE----LLAQVKDLAARVKASSAAADLAQGEQDELVRAFPNLIIDGVPTGDED 136 Query: 120 NE--NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + +A R+H EIGE +G +D +R K+SGARFS L G +A LE A Sbjct: 137 DFALVKTVGEPRDFAAAGFAPRDHLEIGELIGGIDMERGAKVSGARFSFLKGPVARLEIA 196 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L +D T +G+ + P LVR E M GTG K D+++ D +L+ TSEV+L Sbjct: 197 LMNMALDQAT-SYGFIPMITPTLVRPETMAGTGFDVKHDDEIYRLEKDDLYLVGTSEVAL 255 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EII+ P+R+ + +R EAGSAG+DTRG++R HQF K E+ + E++ Sbjct: 256 AGYHSDEIIDLSKGPIRYAGWSSCYRREAGSAGKDTRGIIRVHQFNKLEMFAYIPLEEAE 315 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH RML+ EE+L +L++ YRV+ GDLG SA + +D E W+ Q YRE++S S C Sbjct: 316 AEHARMLAWEEEMLGKLEVPYRVIDTAAGDLGLSAARKFDCEAWVPSQGQYRELTSTSNC 375 Query: 357 GNFQSRRMNSRYR--DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 FQ+RR+N R R ++K + TLNG+ +A R ++AILEN+ NADG+VT+P LR Sbjct: 376 TGFQARRLNIRERIPGEDAKGTRAVATLNGT-LATTRWIMAILENHQNADGTVTVPEKLR 434 Query: 415 PYMNNLAVIK 424 PY+ LA I+ Sbjct: 435 PYLGGLATIE 444 >gi|315644024|ref|ZP_07897194.1| seryl-tRNA synthetase [Paenibacillus vortex V453] gi|315280399|gb|EFU43688.1| seryl-tRNA synthetase [Paenibacillus vortex V453] Length = 433 Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 159/431 (36%), Positives = 234/431 (54%), Gaps = 9/431 (2%) Query: 1 MLDIQWIRQ---NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++W+R+ N E L ++ + ++ LDE+ R L+ +E +R +RN+ S Sbjct: 1 MLDMKWVRESAENQEQLQRVADQKGIALSVAELVELDEQRRALLLAVEGLRQKRNTMSLD 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + +G + LK + + +L I E EV ++ +L+ +PN+ + P+G Sbjct: 61 ISNHMKQGQREEAELLKQQVKAINTELDIQEGLHREVDAAYNELLILVPNIVSPDTPVGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N+ ++ VG+ P R+H +GE L+D R K +G R LTG A L RA Sbjct: 121 SDQDNVEVKRVGQPPEFEFEYRDHVTLGELHRLIDIPRGVKTAGTRSYYLTGIGAMLHRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSL 236 + Q +D+ T G+T + PL VR EAM T P D F + +WL+ TSEV L Sbjct: 181 VQQLAVDMLT-ARGFTLMDVPLTVRTEAMQNTAFFPLGQDQAFHIAEEDKWLVGTSEVPL 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--ED 294 + YS EI++ P+R + FRSE GS GRD G+ R HQF K E V + E Sbjct: 240 VSFYSGEIVDVTQ-PIRLAAASLCFRSEVGSGGRDVHGLYRVHQFAKVEQVVLCEASEET 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S + + + AEE+L+ L+L YRVV++CTGD+ K YD+E W+ + Y E S S Sbjct: 299 SEQLLQEITANAEEMLQMLELPYRVVAVCTGDMSQKTYKQYDIETWMPSRAAYGETHSSS 358 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR N RYRD K L++ HTLN + VA R LI +LEN+ DGS+ IP LR Sbjct: 359 NLLDFQARRSNIRYRDAEGK-LRYCHTLNNTAVASPRILIPLLENHQQEDGSILIPQALR 417 Query: 415 PYMNNLAVIKK 425 PY+N + I Sbjct: 418 PYLNGMERITP 428 >gi|260497970|ref|ZP_05816086.1| seryl-tRNA synthetase [Fusobacterium sp. 3_1_33] gi|260196478|gb|EEW94009.1| seryl-tRNA synthetase [Fusobacterium sp. 3_1_33] Length = 347 Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 179/349 (51%), Positives = 232/349 (66%), Gaps = 2/349 (0%) Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + ++ L+ E E+ +K + IPNV PIG N N+ IR G+ Sbjct: 1 MGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDENYNLEIRKWGEPKKFSF 60 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 + H++IGE LG++DF+R KLSG+RF + G A LERAL FM+D+HT E GYTE Sbjct: 61 EPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALINFMLDVHTLEEGYTEHI 120 Query: 197 APLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 P +V+ E GTGQ+PKF +DM+ TTD +LI TSE+++TN++ EI+E LP +T Sbjct: 121 TPFMVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIHRKEILEQSELPKYYTA 180 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 +P FR EAGS G+D +G++R HQF K E+V IT E S+ E E+M+ AE IL+RL+L Sbjct: 181 YSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAESSYDELEKMVKNAETILQRLELP 240 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSL 376 YRV+ LC+GDLGFSA KTYDLEVWL QN YREISSCS C FQ+RRM +YR PN Sbjct: 241 YRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQARRMGLKYRVPNGS-- 298 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +F HTLNGSG+AVGR L+AI+ENY DGS +P VL PYM + VIKK Sbjct: 299 EFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGVDVIKK 347 >gi|109948207|ref|YP_665435.1| seryl-tRNA synthetase [Helicobacter acinonychis str. Sheeba] gi|123066073|sp|Q17V90|SYS_HELAH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|109715428|emb|CAK00436.1| serS [Helicobacter acinonychis str. Sheeba] Length = 415 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 171/420 (40%), Positives = 255/420 (60%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + +LKKR+ E + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFDKVAHSLKKRNSVIDDGLERLREIITHYKKQLIELESLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + + LK E K +L L K E+ + +S IPN+ E+ P+GTS Sbjct: 61 GIKMTQ--KVDASDLKKELENNKIKLNELSKSVSELEQKIDLKLSIIPNLVDEKTPLGTS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRDFTFTPKEHFELAQKNGWIDFESGVKLAKSRFSVIRGFGAKVYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIISVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A ILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEYMLESASGILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|269793523|ref|YP_003312978.1| seryl-tRNA synthetase [Sanguibacter keddieii DSM 10542] gi|269095708|gb|ACZ20144.1| seryl-tRNA synthetase [Sanguibacter keddieii DSM 10542] Length = 422 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 138/421 (32%), Positives = 221/421 (52%), Gaps = 5/421 (1%) Query: 7 IRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG 65 +R NP+ + + R +P + +L D + R + + E +RA + S ++ +A + Sbjct: 2 VRDNPDLVRASQVARGDDPALVDQVLDADSRRRSALTEFEQLRAEQKSLGKEVAKAQGDE 61 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 +L+ K +K + + + +++ + + P I Sbjct: 62 RAALLARTKTIAEQVKALQADADDADTTLTELSRQIANIVEGAPAGGEDDYVVLRTEGTI 121 Query: 126 RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL 185 R + A + R+H ++GE L +D +R K+SG+RF LTG A LE AL +D Sbjct: 122 RDFQAEYGADFVPRDHLDLGERLKAIDTERGAKVSGSRFYYLTGIGARLELALLNAAMD- 180 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEI 244 G+T + P LV+ E M GTG + AD+++ D +L TSEV+L +S+EI Sbjct: 181 QAYAAGFTPMITPTLVKPEIMAGTGFLGAHADEIYRLEADDLYLTGTSEVALAGYHSNEI 240 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 ++ P R+ + +R EAGS G+DTRG++R HQF K E+ S E++ EHER+L+ Sbjct: 241 LDLSDGPQRYAGWSACYRREAGSYGKDTRGIIRVHQFHKVEMFSYVPVEEADAEHERLLA 300 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRM 364 E++L + +L YRV+ GDLG SA + +D E WL QN + E++S S C FQ+RR+ Sbjct: 301 WEEQMLAKAELPYRVIDTAAGDLGSSAARKFDCEAWLPTQNRFLELTSTSNCTTFQARRL 360 Query: 365 NSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 R R + TLNG+ + R ++AILEN+ ADGSV +P LRPY+ L V++ Sbjct: 361 GIRERTAAG-DTRPVATLNGT-LGTTRWIVAILENHQQADGSVRVPEGLRPYLGGLEVLE 418 Query: 425 K 425 Sbjct: 419 P 419 >gi|332672090|ref|YP_004455098.1| seryl-tRNA synthetase [Cellulomonas fimi ATCC 484] gi|332341128|gb|AEE47711.1| seryl-tRNA synthetase [Cellulomonas fimi ATCC 484] Length = 446 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 147/431 (34%), Positives = 228/431 (52%), Gaps = 14/431 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++ +R++P+ + + R +P + +L D + R + + E +RA + ++ ++ Sbjct: 21 IDLRLLREDPDLVRNSQVLRGDDPSLVDQVLDADARRRAALTQFETLRAEQKAHGKKVAA 80 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A AL +L EQ+ L++E E L I NV + VP G + Sbjct: 81 AQGNEK----HALLAHGKSLAEQVKGLQQEAEEAERHAADLTRRIGNVVEDGVPGGGEDD 136 Query: 121 ENILIR-----SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 ++ + R+H +GE L +D +R K+SGARF LTG A LE Sbjct: 137 YVVVEHVGTPRDFAAEYGDGFAVRDHLALGEGLAAIDTERGAKVSGARFYYLTGLGARLE 196 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEV 234 AL +D G+T V P LV+ E M GTG + AD+++ D +L+ TSEV Sbjct: 197 LALLNAAVDRAL-AAGFTPVITPTLVKPEVMAGTGFLGAHADEIYHLPADDLYLVGTSEV 255 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +L +S EI++ P R+ + +R EAGS G+DTRG++R HQF K E S T ED Sbjct: 256 ALAGYHSGEILDLSGGPKRYAGWSACYRREAGSYGKDTRGIIRVHQFHKVEAFSYTTVED 315 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 + EH R+L +E+L ++L YRV+ GDLG SA + +D E WL Q + E++S S Sbjct: 316 AADEHRRILGWEKEMLDLVELPYRVIDTAAGDLGSSAARKFDCEAWLPSQQRWLELTSTS 375 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 C FQ+RR+ R R + +++ TLNG+ +A R ++AILEN+ DGSV +P LR Sbjct: 376 NCTTFQARRLGVRERTADG-TVRPVATLNGT-LATTRWIVAILENHQQEDGSVRVPEALR 433 Query: 415 PYMNNLAVIKK 425 PY+ L V++ Sbjct: 434 PYLGGLEVLEP 444 >gi|326384326|ref|ZP_08206007.1| seryl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326196924|gb|EGD54117.1| seryl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 417 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 141/426 (33%), Positives = 234/426 (54%), Gaps = 13/426 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + + R +P + +L D R I + + +R + S +G Sbjct: 1 MIDLKIVRENPDLVRASQRARGEDPGLVDQLLDADAARRSAISEADALRTEQKSLGKLVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + AL + L +Q+ ++++ ++ + I N+ E Sbjct: 61 KASGDEK----AALLAKGKDLADQVKAAVAKQNKADAASQAAHRAISNIITEAPA---GG 113 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ ++ +P+AI ++H E+GE+LGL+D R K+SG+RF LTG A L+ L Sbjct: 114 EDDYIVLEHVGEPTAIDDPKDHLELGESLGLIDMARGVKVSGSRFYFLTGLGAMLQLGLL 173 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 T +G+T + P+LV+ E M GTG + +D+++ D +L+ TSEV L Sbjct: 174 NMAAAKAT-ANGFTLMIPPVLVKPEIMGGTGFLGAHSDEIYHLDDDDLYLVGTSEVPLAG 232 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EI++ + P R+ + FR EAGS G+DTRG++R HQF K E + ED+ E Sbjct: 233 YHKDEILDLSNGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAE 292 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L +++L +D+ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 293 HQRILGWEKDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQGTYRELTSTSNCTT 352 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR++ RYRD N K + TLNG+ +A R L+AILEN+ DGSV +P L ++ Sbjct: 353 FQARRLSVRYRDENGK-PQTAATLNGT-LATTRWLVAILENHQQPDGSVVLPPELARFV- 409 Query: 419 NLAVIK 424 + I Sbjct: 410 GVERIT 415 >gi|315637975|ref|ZP_07893160.1| serine--tRNA ligase [Campylobacter upsaliensis JV21] gi|315481823|gb|EFU72442.1| serine--tRNA ligase [Campylobacter upsaliensis JV21] Length = 411 Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 177/422 (41%), Positives = 262/422 (62%), Gaps = 16/422 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP----QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD++ ++ + + + LK + ++ I +L +K ++L +E+++A +N S Sbjct: 1 MLDLKKLQNDFDSVATKLKNKKVDELLLKDLSEIFTLLKKEKML---LEELQAFQNKFSK 57 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 ++ +A + LK + S K ++ ++ E+ L+ L IPN+P ++V +G Sbjct: 58 ELAKA------ENKEELKQQLSENKTKISTQNQKVKELEERLENLAFKIPNIPDDDVIVG 111 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + N++++ V PS +EHFE+GE L +DF R K++ +RF VL A L R Sbjct: 112 DDEDGNLVLKRVLTPPSFDFEVKEHFELGEGLEWLDFVRGVKIAQSRFCVLKEEGALLNR 171 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVS 235 AL +MID + G+ V+ P LV AM+GTGQ+PKF DDM+ + +LI TSE++ Sbjct: 172 ALINYMIDFN-RSRGFKFVNVPFLVNQNAMFGTGQLPKFKDDMYKVEEEDLYLISTSEIA 230 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTNL++ EI+ +++LPL+ T + FR EAGSAGRDTRG++RQHQF K ELVSIT + S Sbjct: 231 LTNLFNDEILNAENLPLKMTAYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITSPKQS 290 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + M CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN +REISS S Sbjct: 291 ESVFNEMCECASDLLSSLGLAHRWMMLCTGDLGFSAAKTIDLEVWLPGQNQFREISSVSN 350 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP VLR Sbjct: 351 CRDFQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKNGKIAIPDVLRK 409 Query: 416 YM 417 Y Sbjct: 410 YF 411 >gi|317011615|gb|ADU85362.1| seryl-tRNA synthetase [Helicobacter pylori SouthAfrica7] Length = 415 Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 172/420 (40%), Positives = 259/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + +LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFDKVAHSLKKRNSAMDDELERLREIITHYKKQLIELESLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+GTS Sbjct: 61 GIKMAQ--KVGASDLKKELENNKIKLNELSKSVSELEQEIDSKLSIIPNLVDEKTPLGTS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N+ I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNVEIKKILTPRNFTFTPKEHFELAQKNGWIDFESGVKLAKSRFSVIRGFGAKVYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPTSEV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTSEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY II + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYHDTIISVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A ILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEYMLESASAILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|154494911|ref|ZP_02033916.1| hypothetical protein PARMER_03955 [Parabacteroides merdae ATCC 43184] gi|154085461|gb|EDN84506.1| hypothetical protein PARMER_03955 [Parabacteroides merdae ATCC 43184] Length = 424 Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 152/428 (35%), Positives = 233/428 (54%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + + + L+K+H + ++ L++K R +++ A N S Sbjct: 1 MLTLKVITEETDRVIRGLEKKHFKGAQESIAKVIELNDKRRGAQNQLDKNLAEVNQTSKT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + K + +KE ++ E + ++ L+ IPNVP +EVP G Sbjct: 61 IGMLMKEGKKEEAEIAKQRVAEIKEVNKAIQAEMDQAAEDMQNLLYTIPNVPYDEVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N + + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GADDNKVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGQGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 N+Q+ R+ RYRD N K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DNYQANRLKCRYRDEN-KKTQLCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MNNLAVIK 424 +IK Sbjct: 418 T-GFDMIK 424 >gi|57505889|ref|ZP_00371814.1| seryl-tRNA synthetase [Campylobacter upsaliensis RM3195] gi|57015919|gb|EAL52708.1| seryl-tRNA synthetase [Campylobacter upsaliensis RM3195] Length = 411 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 177/422 (41%), Positives = 258/422 (61%), Gaps = 16/422 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP----QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD++ ++ + + + LK + ++ I +L +K ++L +E+++A +N S Sbjct: 1 MLDLKKLQNDFDSVATKLKNKKVDEALLKDLSEIFTLLKKEKML---LEELQAFQNKFSK 57 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 ++ A + LK + K ++ ++ E L+ L IPN+P ++V +G Sbjct: 58 ELANA------ENKEELKQKLGENKTKIATQNQKVKEFEERLENLAFKIPNIPDDDVIVG 111 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + N+ ++ V PS REHFE+GE L +DF R K++ +RF VL A L R Sbjct: 112 DDEDGNLELKRVLTPPSFDFEPREHFELGEGLEWLDFVRGVKIAQSRFCVLKEEGALLNR 171 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVS 235 AL +MID + G+ V+ P LV AM+GTGQ+PKF DDM+ + +LI TSE++ Sbjct: 172 ALINYMIDFN-RSRGFKFVNVPFLVNQNAMFGTGQLPKFKDDMYKVEEEDLYLISTSEIA 230 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTNL++ EI+ +++LPL+ T + FR EAGSAGRDTRG++RQHQF K ELVSIT + S Sbjct: 231 LTNLFNDEILNAENLPLKMTAYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITSPKQS 290 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + M CA ++L L L +R + LCTGDLGFSA KT DLEVWL GQN +REISS S Sbjct: 291 ESVFNEMCECASDLLSSLGLAHRWMMLCTGDLGFSAAKTIDLEVWLPGQNQFREISSVSN 350 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +FQ+RR RY++ K+ + HTLNGS +AVGR L+AI+ENY + +G + IP VLR Sbjct: 351 CRDFQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTLVAIMENYQDKNGKIAIPDVLRK 409 Query: 416 YM 417 Y Sbjct: 410 YF 411 >gi|283782854|ref|YP_003373608.1| serine--tRNA ligase [Gardnerella vaginalis 409-05] gi|283442193|gb|ADB14659.1| serine--tRNA ligase [Gardnerella vaginalis 409-05] Length = 428 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 137/431 (31%), Positives = 235/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L D+ R +K E+ RA + + ++ Sbjct: 1 MLDIQFIREHADVVKESQRKRGESVELVDEVLRSDDLRRTALKAFEEARAEQKAIGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A AE AL ET L ++ + E + + + + N+ +E P G Sbjct: 61 TASAEEK----AALIAETKELASKVAEYKAESEKATADYTTAMWKLSNIVEDEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D R K++G+RF L G +A L+ A Sbjct: 117 DYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EI++ + LR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 236 LAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++L +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 RAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AILEN+ + DGS+ IP ++ Sbjct: 356 CTEYQARRLNVRERMEDGGTRS-VSTLNGT-LATTRWLVAILENHQHEDGSIDIPKAMQA 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|217031825|ref|ZP_03437328.1| hypothetical protein HPB128_199g33 [Helicobacter pylori B128] gi|298735550|ref|YP_003728071.1| seryl-tRNA synthetase [Helicobacter pylori B8] gi|216946477|gb|EEC25079.1| hypothetical protein HPB128_199g33 [Helicobacter pylori B128] gi|298354735|emb|CBI65607.1| seryl-tRNA synthetase [Helicobacter pylori B8] Length = 415 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 173/420 (41%), Positives = 261/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ E + + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFEMVALSLKKRNSAMDDGLERLREVITRYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ + LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KADASDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEYMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|159467701|ref|XP_001692030.1| seryl-trna synthetase [Chlamydomonas reinhardtii] gi|158278757|gb|EDP04520.1| seryl-trna synthetase [Chlamydomonas reinhardtii] Length = 472 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 130/449 (28%), Positives = 222/449 (49%), Gaps = 23/449 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R +PE + + ++R + + +++LD + R + +++ + N+ + Sbjct: 1 MLDINLFRTEKGGDPEIVRESQRRRFADVTLVDQVIALDAEWRQVRFQLDQLNKEFNALN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +I G S D L+ ++ +K+++ E++E +V + + I N+ + VP+ Sbjct: 61 KEIATVRKAGGNS--DELQEKSKEMKKKIQETEEKEKDVIKTRDSKVVAIGNIVHDSVPV 118 Query: 116 GTSANENILIRSVGKK-----PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 N ++++ G+ P++ H ++ LG+++ + +++G R LT Sbjct: 119 SQDEANNAIVKTFGECRPQVDPASGKKLYNHVDLVLLLGIVNMEAGQEVAGGRGYYLTHE 178 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRW 227 L +AL + + GY V P +R E M Q+ +F D+++ T D ++ Sbjct: 179 GVLLNQALINAALQ-MAYKRGYAPVHTPFFMRQEIMAECAQLSQFDDELYKVTGEGDDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE +L ++ E LP ++ + FR E GS GRDT G+ R HQF K E Sbjct: 238 LIATSEQTLCAMHRKGWFEKADLPTKYVGYSTCFRKEVGSHGRDTLGIFRIHQFEKVEQF 297 Query: 288 SITREE--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 I E S+ E ML+ AE+ + L L YRVV++ +G+L +A K YDLE W Sbjct: 298 VIASPEGNASWEAMEEMLANAEDFYQSLGLPYRVVNIVSGELNNAASKKYDLEAWFPASA 357 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLK----FTHTLNGSGVAVGRCLIAILENYL 401 +RE+ SCS C ++QSRR++ R R P + + F H LN + A R L +LENY Sbjct: 358 TFRELVSCSNCLDYQSRRLDVRLRTPKGAAAETTKSFVHMLNSTLTATERTLCCVLENYQ 417 Query: 402 NADGSVTIPTVLRPYMNNLAVIKKEHILE 430 DG V +P L+P+M + I + Sbjct: 418 TPDG-VRVPDALKPFMAGVEFIPFRKTFD 445 >gi|326329349|ref|ZP_08195674.1| serine--tRNA ligase [Nocardioidaceae bacterium Broad-1] gi|325952924|gb|EGD44939.1| serine--tRNA ligase [Nocardioidaceae bacterium Broad-1] Length = 423 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 144/428 (33%), Positives = 228/428 (53%), Gaps = 11/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R++P+ + + ++R + LS D R I E RA + ++ Sbjct: 1 MIDPRILREDPDRVRASQERRGASSDVVDRALSADSARRAAIADFEAKRAEQKQMGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E L E L + E ++ KK + IPN+ + G Sbjct: 61 QAKGEEK----QQLLAEVKELAAAVKEAEAAQNAAEDEWKKALKAIPNLADDAPAGGEDD 116 Query: 120 NENILIRSVGKKPSAI-HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 I + A R+H E+G+ LG +D +R K+SG+RF LTG A LE AL Sbjct: 117 FVLIEKVGKPRDFEAEGFEPRDHVELGKMLGAIDLERGAKVSGSRFYFLTGVGAELEFAL 176 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 ++ E G+T+V AP LVR EAM GTG + + D ++ D +L+ TSEV + Sbjct: 177 INLAME-QAREAGFTQVIAPALVRPEAMEGTGFLDQVDDGVYKIEDDDLYLVGTSEVPMA 235 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 ++ EI++ ++LP R+ + FR EAGSAG+DT+G++R HQF K E+ T E+S+ Sbjct: 236 AYHADEILDPETLPRRYAAFSSCFRKEAGSAGKDTKGIIRVHQFEKVEMFVYTTVEESYA 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EH+R+L + L +L+L Y+V+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 EHQRLLEWEKAFLDKLELAYQVIDVAAGDLGPSALRKFDCEAWIPTQGKYRELTSASNCT 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR++ R R + + TLNG+ A+ R ++A+LE + ADGSV +P L+ ++ Sbjct: 356 TFQARRLDIRQRTESGTTP--VATLNGTLTAITRAIVAVLETHQQADGSVRVPKALQKWL 413 Query: 418 NNLAVIKK 425 V++ Sbjct: 414 -GREVLEP 420 >gi|307330228|ref|ZP_07609376.1| seryl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] gi|306884134|gb|EFN15172.1| seryl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] Length = 412 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 142/415 (34%), Positives = 225/415 (54%), Gaps = 11/415 (2%) Query: 15 DIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 + + R + + +L+ DE+ R + +++RA + + I +A + L Sbjct: 2 RASQRARGEDVGIVDALLTADERRRSSSVRFDELRAEQKALGKLIPKASGDEKAE----L 57 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI--LIRSVGKK 131 + L + + E+ ++L+ + N+ EVP+G + + I + Sbjct: 58 LKKAGELSAAVKAADAEQDAAAEETQQLLLQLGNLVHPEVPVGGEDDFAVLETIGTPRDF 117 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + ++H E+GE LG +D +R K+SG+RF LTG A LE AL + + G Sbjct: 118 DAEGFAPKDHLELGELLGAIDTERGAKVSGSRFYYLTGIGALLEFALVNAAMAQ-ATAAG 176 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSL 250 +T V P LV+ +AM GTG + + A+D++ D +L+ TSEV L + EI+E+ +L Sbjct: 177 FTPVLTPALVKPKAMEGTGFLGQAAEDVYHLDKDDLYLVGTSEVPLAAYHMDEILEADAL 236 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 P R+ + FR EAGS G+DTRG+ R HQF K E+ T ED+ EH+R+L ++ L Sbjct: 237 PRRYAGFSSCFRREAGSYGKDTRGIFRVHQFDKVEMYVYTTPEDAEAEHQRLLDWEKQWL 296 Query: 311 KRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD 370 L+L +RVV L +GDLG SA + +D E W+ Q YRE++S S FQSRR++ R R Sbjct: 297 TSLELPFRVVDLASGDLGSSATRKFDCEAWIPTQGKYRELTSTSNTTEFQSRRLSIRMR- 355 Query: 371 PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 K ++ TLNG+ AV R ++AILEN+ ADGSV +P LRP++ V++ Sbjct: 356 -EGKKVRPLATLNGTLCAVTRTIVAILENHQQADGSVRVPEALRPFLGGREVLEP 409 >gi|313676879|ref|YP_004054875.1| seryl-tRNA synthetase [Marivirga tractuosa DSM 4126] gi|312943577|gb|ADR22767.1| seryl-tRNA synthetase [Marivirga tractuosa DSM 4126] Length = 424 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 155/422 (36%), Positives = 236/422 (55%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML + +R++ + L KR++E + I++LD+K + L +++ + A N S Sbjct: 1 MLQVANLREDKANAVKGLLKRNIENAESLIDGIIALDDKRKALQTELDSVLAESNQISKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + +K +T+ LK++ IL++E E+ L + IPNVP E+V G Sbjct: 61 IGVLMKEGKKEEAEKVKTKTAELKQRSKILQEESQEIEKELMDSLYQIPNVPHEDVKKGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N ++ GKKP + H+++ + ++DFD K++GA F V G A ++RA Sbjct: 121 GEDDNEILSEHGKKPELYSGKKPHWDLIKDYDIIDFDLGIKITGAGFPVYKGKGARMQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSL 236 L F +D + G+ E+ P+LV + + GTGQ+P M+ +LIPT+EV + Sbjct: 181 LLNFFLDE-AEKQGFKEIQPPVLVNEASGIGTGQLPDKEGQMYHIEDTDLYLIPTAEVPI 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL EII + LP++ T P FR EAGS G RG+ R HQF K E+V + + S+ Sbjct: 240 TNLLRDEIINEEDLPIKLTAYTPCFRKEAGSWGAHVRGLNRLHQFDKVEIVQVLHPDKSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E M S + +L +L+L YRV+ LC GDLGF++ TYD+EVW A Q + E+SS S Sbjct: 300 QALEEMSSYIQSLLTKLELPYRVLRLCGGDLGFTSALTYDMEVWSAAQEKWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +QS R+ RY+D + K HTLNGS +A R L AILEN G + +P VL+ Y Sbjct: 360 ETYQSNRLKLRYKDAD-KKKHLLHTLNGSALAFPRILAAILENNQTEKG-IRVPKVLQSY 417 Query: 417 MN 418 Sbjct: 418 TG 419 >gi|297242870|ref|ZP_06926808.1| seryl-tRNA synthetase [Gardnerella vaginalis AMD] gi|296889081|gb|EFH27815.1| seryl-tRNA synthetase [Gardnerella vaginalis AMD] Length = 428 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 137/431 (31%), Positives = 237/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L D+ R +K E+ RA + + ++ Sbjct: 1 MLDIQFIREHADVVKESQRKRGESVELVDEVLHNDDLRRTALKAFEEARAEQKAIGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A AE ++ L ET L ++ + E + + + + N+ +E P G Sbjct: 61 TASAEEKVA----LIAETKELASKVAEYKAESEKATADYTTAMWKLSNIVEDEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D R K++G+RF L G +A L+ A Sbjct: 117 DYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EI++ + LR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 236 LAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++LS +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 RAEHQKLLSMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AILEN+ + DGS+ IP ++ Sbjct: 356 CTEYQARRLNVRERMEDGG-TRPVSTLNGT-LATTRWLVAILENHQHEDGSIDIPKAMQA 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|254779990|ref|YP_003058097.1| seryl-tRNA synthetase [Helicobacter pylori B38] gi|254001903|emb|CAX30156.1| Seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) [Helicobacter pylori B38] Length = 415 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 172/420 (40%), Positives = 261/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ ++ E + + + + + ++E ++A +N S + Sbjct: 1 MIDRRLLLQDFDRVALSLKKRNNAMDDTLERLREVITRYKKRLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ + LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KADASDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRVFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT +S Sbjct: 238 NLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPTESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|311114299|ref|YP_003985520.1| serine--tRNA ligase [Gardnerella vaginalis ATCC 14019] gi|310945793|gb|ADP38497.1| serine--tRNA ligase [Gardnerella vaginalis ATCC 14019] Length = 428 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 136/431 (31%), Positives = 234/431 (54%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDIQ+IR++ + + + +KR + + +L D+ R +K E RA + IG Sbjct: 1 MLDIQFIREHADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQ----KAIG 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +A S L +T L +++ + E + + + + N+ +E P G Sbjct: 57 KKVAAAQDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAPEGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + ++H +G + +D R K++G+RF L G +A L+ A Sbjct: 117 DYVVVKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVS 235 + +D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+ Sbjct: 177 MLTMAVD-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVA 235 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L ++ EI++ + LR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS Sbjct: 236 LAGMHEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 EH+++L +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 296 RAEHQKLLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C +Q+RR+N R R + + TLNG+ +A R L+AILEN+ + DGS+ IP ++ Sbjct: 356 CTEYQARRLNVRERMEDGG-TRPVSTLNGT-LATTRWLVAILENHQHEDGSIDIPKAMQA 413 Query: 416 YMNNLAVIKKE 426 YM VI+ Sbjct: 414 YMGGKEVIEPT 424 >gi|323345458|ref|ZP_08085681.1| serine--tRNA ligase [Prevotella oralis ATCC 33269] gi|323093572|gb|EFZ36150.1| serine--tRNA ligase [Prevotella oralis ATCC 33269] Length = 430 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 148/431 (34%), Positives = 239/431 (55%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H E E +L +D R +K++ + + N + Sbjct: 1 MLTLKLISEETERVIKGLEKKHFEDARKTIENVLIIDRHRRDAQQKLDKNKQQANLLAKD 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + G + +K + + LK L++E + ++ IPN+P ++VP G Sbjct: 61 IGMLMKTGRKEQAEVVKAQVAELKTFDKKLQEEMDNAQKKMTDILLTIPNIPNDKVPEGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 AN+N++++ G+KP + H+++ + L+DFD K++GA F + G +A L+RA Sbjct: 121 DANDNVVVKEGGEKPVLPENALCHWDLCKKYNLVDFDLGVKITGAGFPIYIGKMARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D + GY EV P +V + + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLDE-ARKSGYLEVQPPFVVNEVSGYGTGQLPDKEGQMYHANLDNLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ I+E K LP++ + FR EAGS G+D RG+ R HQF K ELV I E S+ Sbjct: 240 TNIFRDTILEEKELPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVELVRIDTPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ML E + K+L+L Y ++ LC GD F++ YD EVW A Q + E+SS S Sbjct: 300 QSLQEMLDHVEGLCKKLELPYHILLLCGGDQSFTSSICYDFEVWSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R++ RYR ++K ++ HTLNGS +A+ R + ILEN +G + +P VL PY Sbjct: 360 ESYQANRLHCRYRRFDNKKIELCHTLNGSALALPRIVATILENNQTPEG-IRVPKVLIPY 418 Query: 417 MNNLAVIKKEH 427 +I ++ Sbjct: 419 C-GFDLIDDKN 428 >gi|301167659|emb|CBW27242.1| seryl-tRNA synthetase [Bacteriovorax marinus SJ] Length = 422 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 150/428 (35%), Positives = 237/428 (55%), Gaps = 9/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++IR+N + + A K ++++ + +L LD L K+++++ +RNS+S +I + Sbjct: 1 MLDIKFIRENLDTVKNAAKVKNIDFNFDLLLDLDRDITELKGKVQELQEKRNSHSKKIPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A AE + L E + +L ++ E L+ L+ P +P + PIG N Sbjct: 61 ASAEERPA----LIEEGRAIGTELDAIKPSLTEKELELRNLLLQAPMIPSPDAPIGNDEN 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ G+ P +H EI E +F++ +SG+R L + LE A+ + Sbjct: 117 DNVEVKKHGELPQFNFKPLDHVEILEKQNWAEFEKIAAVSGSRSYSLRNDMVLLEMAMHR 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 + ++ G+T VS P L R+EA+ GTG P D ++ D +L T+EV L +L Sbjct: 177 YALE-KLQSKGFTLVSTPSLAREEALVGTGHFPTGRDQVYYLPEDDLYLSGTAEVQLNSL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR--EEDSFT 297 +S +I+ LP+ + +P FR EAGS GRD RG++R HQF K E I + E+S Sbjct: 236 HSKDILSEDKLPILYAGYSPCFRREAGSYGRDVRGLIRVHQFMKVEQYVICKNSPEESNK 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H+ +L +EEI++ +L YR+V CTGD+G + YD+E W+ + YRE SCS Sbjct: 296 WHKILLETSEEIVQDFELPYRIVECCTGDMGTGKVRMYDIECWVPSEQKYRETHSCSQLH 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++QSRR N+RYRD + K ++F HTLN + VA R L+ LE + DG V IP LRPY+ Sbjct: 356 DWQSRRTNTRYRDNDGK-VQFVHTLNNTAVATPRTLVPFLECHQQEDGRVRIPEKLRPYL 414 Query: 418 NNLAVIKK 425 + K Sbjct: 415 GGAEFLGK 422 >gi|225164972|ref|ZP_03727182.1| Serine--tRNA ligase [Opitutaceae bacterium TAV2] gi|224800413|gb|EEG18799.1| Serine--tRNA ligase [Opitutaceae bacterium TAV2] Length = 426 Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats. Identities = 153/423 (36%), Positives = 235/423 (55%), Gaps = 9/423 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R +P+ + A+ K+HL+ + +L+LD R + ++E +R R+ + +A++ + Sbjct: 1 MLDPKLLRDSPDLVRAAIAKKHLDVDLDALLALDAAWRAQLAEVEALRGRQKAANAEMVK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G+ + + E T+ ++ E E+ + K+ + +PN+P VP G + Sbjct: 61 L-PKGSPEFIAKV-QEMKTVSAEVKAREAGLTEIEARHKQAMLSVPNLPHASVPEGRTPE 118 Query: 121 ENILIRSVGKKPSAIHLSRE----HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 EN++ + G + H+EI L DF R K++GA F G A L R Sbjct: 119 ENVVFSTWGDPAAIPSTVANSARAHWEIPGFENLFDFGRGAKVTGAGFPFYVGDAARLVR 178 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVS 235 AL F +D + + GY EV+ P+ V + TGQ+P M+ + +PT+EV Sbjct: 179 ALLHFFLDEN-GKAGYQEVNPPIFVNAASATATGQLPDKEGQMYEAQTDGFYAVPTAEVP 237 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTN + EI++ +LP+ P FR EAGS G+D RG+ R HQF K EL+ S Sbjct: 238 LTNFFRDEILDEAALPVYRCAYTPCFRREAGSYGKDVRGLNRLHQFDKVELLKWVHPSTS 297 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E +++ AE +L++L+L YRV+ +C GDLGF+ K YDLEVW AGQ + E+SSCS Sbjct: 298 YDELDKLRDDAERLLRKLELPYRVLLMCGGDLGFAQSKKYDLEVWSAGQKRWLEVSSCSN 357 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR R+R + K + HTLNGSG+AV R L A+LEN L DG V +P VL P Sbjct: 358 FESFQARRAQIRFRGKDGK-PELVHTLNGSGLAVPRVLAALLENNLQPDGRVKVPAVLVP 416 Query: 416 YMN 418 Y Sbjct: 417 YFG 419 >gi|318061333|ref|ZP_07980054.1| seryl-tRNA synthetase [Streptomyces sp. SA3_actG] gi|318078670|ref|ZP_07986002.1| seryl-tRNA synthetase [Streptomyces sp. SA3_actF] Length = 416 Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats. Identities = 146/415 (35%), Positives = 226/415 (54%), Gaps = 11/415 (2%) Query: 15 DIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 + + R + + +LS DE+ R + +++RA + Q+G+ I + L Sbjct: 2 RASQRARGEDVGLVDSLLSADERRRSSGVRFDELRAEQ----KQLGKLIPKAQGDEKQEL 57 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN--ILIRSVGKK 131 T L + + E+ + + + L+ + N+ +VP+G + ++ Sbjct: 58 LKRTGELAAAVKAADAEQSDAAAQTQDLLRRLGNLVHPDVPVGGEEDFALLETHGTIRDF 117 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + ++H E+G LG +D +RA K+SG+RF L+G A LE AL I + G Sbjct: 118 EAEGFAPKDHLELGHLLGAIDVERAAKVSGSRFYYLSGIGALLELALVNAAIAQ-ATAAG 176 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEIIESKSL 250 +T + P LVR +AM GTG + + D++ D +L+ TSEV+L + EIIE+ L Sbjct: 177 FTPMLTPALVRPQAMDGTGFLGQAGQDVYHLKDDDLYLVGTSEVALAGYHMDEIIEADRL 236 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 PLR+ +P FR EAGS G+DTRG+ R HQF K E+ + EDS EH R+L ++ L Sbjct: 237 PLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFTYVAPEDSEAEHRRLLEWEKQWL 296 Query: 311 KRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD 370 L L +RV+ + TGDLG SA + +D E W+ Q YRE++S S C FQ+RR++ R RD Sbjct: 297 TSLGLPFRVIDVATGDLGSSAARKFDCEAWIPTQGKYRELTSTSDCTEFQARRLSIRMRD 356 Query: 371 PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 K + TLNG+ AV R ++A+LEN+ ADGSV +P VLRPY+ V++ Sbjct: 357 --GKKTRPLATLNGTLCAVPRTIVALLENHQQADGSVRVPEVLRPYLGGREVLEP 409 >gi|302535255|ref|ZP_07287597.1| seryl-tRNA synthetase [Streptomyces sp. C] gi|302444150|gb|EFL15966.1| seryl-tRNA synthetase [Streptomyces sp. C] Length = 430 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 184/433 (42%), Positives = 244/433 (56%), Gaps = 7/433 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D + + L +R + L + I+ +D+RA ++++ Q Sbjct: 1 MHDARALIDMGAEAVRRLARRGYTLDLTRLEDLQSRRNRAIRSADDLRAESKRVASEVQQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + LK LK+++ +E E+ +V L+ L+ IPN+P + P G S Sbjct: 61 TARQGG--DITGLKERARELKDRIREVETEQEQVQDELRDLLLTIPNLPDDAAPDGDSEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + +R VG P ++H ++GEA G++DF RATKLSG+RF+V G A LERAL Sbjct: 119 FAVEVRRVGTPPVFPFEPKDHVDLGEATGILDFARATKLSGSRFAVSRGAGAALERALAS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 +DLHT HGY E + P LV + M GTGQ+PKF +D+F T +LIPT+EV LT Sbjct: 179 LFLDLHTRRHGYVEHAVPYLVTRKTMTGTGQLPKFEEDLFKTGVADRELFLIPTAEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ EII LPL T P FRSEAGS GRDTRG++RQHQF K E+V I E + + Sbjct: 239 NLYADEIIPPAELPLALTAHTPCFRSEAGSYGRDTRGLIRQHQFSKVEIVRIVDPETADS 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E M+ AE L+ L L YRVV L GD GFSA TYD+EVW+ QN YREISS S G Sbjct: 299 ELETMVGHAEACLRELGLAYRVVRLAAGDTGFSAQLTYDIEVWIPSQNTYREISSVSHFG 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR N R R + K K TLNGSG+ +GR L A+LE DGS+ +P L PY+ Sbjct: 359 TFQARRANIRTRGEDGK-PKPVATLNGSGLPIGRTLAALLEQCQQEDGSLVLPESLAPYL 417 Query: 418 NNLAVIKKEHILE 430 I E Sbjct: 418 -GFRRITANGTPE 429 >gi|317013250|gb|ADU83858.1| seryl-tRNA synthetase [Helicobacter pylori Lithuania75] Length = 415 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 169/420 (40%), Positives = 260/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ ++ E + + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFDKVALSLKKRNHAMDDGLERLREVITRYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G + Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAN 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRVFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EIL+ L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQECMLESASEILRALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ DGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLVHTLNGSSLAVGRTMVALMENHQQEDGSIHIPKALEKYL 415 >gi|169627258|ref|YP_001700907.1| seryl-tRNA synthetase [Mycobacterium abscessus ATCC 19977] gi|238688911|sp|B1MEI9|SYS_MYCA9 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|169239225|emb|CAM60253.1| seryl-tRNA synthetase (SerS) [Mycobacterium abscessus] Length = 418 Score = 345 bits (885), Expect = 8e-93, Method: Composition-based stats. Identities = 150/428 (35%), Positives = 244/428 (57%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+NP+ + + + R +P E +L D R I + +RA + + S ++G Sbjct: 1 MIDLKFLRENPDAVRASQRLRGEDPALVEVLLDADTARRAAISTADTLRAEQKAASKKVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E +L+ A + +K E E+ ++ + I NV ++ VP Sbjct: 61 KATPEERPALLAAASELAAQVKS----AEAEQVVTEAAFTEAHKAISNVVIDGVP--AGG 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +R + +P I ++H E+GE+LGL D +R K+SGARF LTG+ A L+ L Sbjct: 115 EQDFALRELVGEPHPIENPKDHVELGESLGLFDMERGAKVSGARFYFLTGYGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q + +G+T + P+LV+ E M GTG + AD+++ D +L+ TSEV + Sbjct: 175 QLAVQTAV-ANGFTLLIPPVLVKPEIMGGTGFLGAHADEVYHLEEDDLYLVGTSEVPIAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ + PLR+ + FR EAGS G+DTRG++R HQF K E + ED+ E Sbjct: 234 YHSGEILDLNNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEAFVYCKPEDAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE++L ++L +++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HEKILGWERQMLGHIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQRAYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD + K + TLNG+ +A R L+AILEN+ DGSV +PT L P++ Sbjct: 354 FQARRLAVRYRDESGK-PQIAATLNGT-LATTRWLVAILENHQQPDGSVRVPTALVPFV- 410 Query: 419 NLAVIKKE 426 V++ + Sbjct: 411 GTEVLEPK 418 >gi|256840569|ref|ZP_05546077.1| seryl-tRNA synthetase [Parabacteroides sp. D13] gi|256737841|gb|EEU51167.1| seryl-tRNA synthetase [Parabacteroides sp. D13] Length = 424 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 160/428 (37%), Positives = 239/428 (55%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N + + L+K+ + + +L L++K RI +++ A N+ S Sbjct: 1 MLTIKLITENTDAVIRGLEKKHFKGAKESIDKVLELNDKRRIAQNQLDKNLAEVNATSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG +A K S +KE L+ E + L+ L+ IPNVP +EVP GT Sbjct: 61 IGQLMKEGKKEEAEAAKKHVSEIKEVSKALQAEMDQAAEELQNLLYTIPNVPYDEVPEGT 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 SA +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 SAEDNVVEKMGGMETELPKNALPHWELAKKYDLIDFDLGVKITGAGFPVYKGLGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GY E+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARDAGYLEIMPPTVVNSASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML+ E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLNHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYRD N K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRDEN-KKTQLCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALIPY 417 Query: 417 MNNLAVIK 424 +IK Sbjct: 418 T-GFDMIK 424 >gi|326519877|dbj|BAK03863.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 457 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 135/442 (30%), Positives = 217/442 (49%), Gaps = 17/442 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ +PE + + + R + + ++ LDE R +++ IR N S Sbjct: 1 MLDINLFRKEKGGDPELVRQSQRSRFAPVELVDEVIVLDEAWRQRQFELDKIRQELNKTS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ A+ L T +K++L E E E ++L + I N+ E VPI Sbjct: 61 KEIGKLKAKKQ--DATELIQSTEEIKKRLAAKETEVQEAKTTLDVKLVTIGNLVHESVPI 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N ++R+ G + + H ++ L ++ D+ ++G R L G L Sbjct: 119 SNDEANNAIVRTWG-EKRLEENLKNHVDLCIMLDIVSLDKGADVAGGRGFFLKGDGVLLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +AL F + + +T + P +R E M Q+ +F ++++ T + ++LI TS Sbjct: 178 QALINFGLSF-LRKRDFTPMQTPFFMRKEIMAKCAQLAQFDEELYKVTGDGEDKYLIATS 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+R+ + FR EAGS GRDT G+ R HQF K E T Sbjct: 237 EQPLCAYHLGDRIYPADLPIRYAGFSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCATNP 296 Query: 293 ED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 D S+ HE M+ AE+ + + L Y++VS+ +G L +A K YDLE W +RE+ Sbjct: 297 NDNVSWEMHEEMIKNAEDFYQAIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTFREL 356 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C ++Q+RR+ Y + + +S +F H LN + A R L ILENY G V Sbjct: 357 VSCSNCTDYQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENYQRE-GGVE 415 Query: 409 IPTVLRPYMNNLAVIKKEHILE 430 +P VLRP+M + + + L+ Sbjct: 416 VPVVLRPFMLGIDFLPFKRPLD 437 >gi|15610970|ref|NP_218351.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] gi|15843458|ref|NP_338495.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31795008|ref|NP_857501.1| seryl-tRNA synthetase [Mycobacterium bovis AF2122/97] gi|121639752|ref|YP_979976.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663702|ref|YP_001285225.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148825041|ref|YP_001289795.1| seryl-tRNA synthetase [Mycobacterium tuberculosis F11] gi|167969949|ref|ZP_02552226.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|215405889|ref|ZP_03418070.1| seryl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|215413759|ref|ZP_03422427.1| seryl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|215425094|ref|ZP_03423013.1| seryl-tRNA synthetase [Mycobacterium tuberculosis T92] gi|215432815|ref|ZP_03430734.1| seryl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|218755622|ref|ZP_03534418.1| seryl-tRNA synthetase [Mycobacterium tuberculosis GM 1503] gi|219559932|ref|ZP_03539008.1| seryl-tRNA synthetase [Mycobacterium tuberculosis T17] gi|224992247|ref|YP_002646937.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800882|ref|YP_003033884.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 1435] gi|254552950|ref|ZP_05143397.1| seryl-tRNA synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260184762|ref|ZP_05762236.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A] gi|260198886|ref|ZP_05766377.1| seryl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289441272|ref|ZP_06431016.1| seryl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289445435|ref|ZP_06435179.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CPHL_A] gi|289556101|ref|ZP_06445311.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 605] gi|289572087|ref|ZP_06452314.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T17] gi|289747675|ref|ZP_06507053.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 02_1987] gi|289748365|ref|ZP_06507743.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T92] gi|289755967|ref|ZP_06515345.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis EAS054] gi|289764020|ref|ZP_06523398.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis GM 1503] gi|294993037|ref|ZP_06798728.1| seryl-tRNA synthetase [Mycobacterium tuberculosis 210] gi|297636517|ref|ZP_06954297.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207] gi|297733512|ref|ZP_06962630.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN R506] gi|298527309|ref|ZP_07014718.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 94_M4241A] gi|306778197|ref|ZP_07416534.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu001] gi|306778727|ref|ZP_07417064.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu002] gi|306786754|ref|ZP_07425076.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu003] gi|306786884|ref|ZP_07425206.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu004] gi|306791439|ref|ZP_07429741.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu005] gi|306795504|ref|ZP_07433806.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu006] gi|306801479|ref|ZP_07438147.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu008] gi|306805686|ref|ZP_07442354.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu007] gi|306970081|ref|ZP_07482742.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu009] gi|307082021|ref|ZP_07491191.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu011] gi|307086634|ref|ZP_07495747.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu012] gi|313660843|ref|ZP_07817723.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475] gi|54039689|sp|P67562|SYS_MYCBO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|54042040|sp|P67561|SYS_MYCTU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166222746|sp|A1KQG9|SYS_MYCBP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166222750|sp|A5U9G3|SYS_MYCTA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783038|sp|C1AIU0|SYS_MYCBT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|1781123|emb|CAB06207.1| SERYL-TRNA SYNTHETASE SERS (SERINE--TRNA LIGASE) (SERRS) (SERINE TRANSLASE) [Mycobacterium tuberculosis H37Rv] gi|13883829|gb|AAK48309.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31620606|emb|CAD96050.1| SERYL-TRNA SYNTHETASE SERS (SERINE--TRNA LIGASE) (SERRS) (SERINE TRANSLASE) [Mycobacterium bovis AF2122/97] gi|121495400|emb|CAL73887.1| seryl-tRNA synthetase serS [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148507854|gb|ABQ75663.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|148723568|gb|ABR08193.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis F11] gi|224775363|dbj|BAH28169.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253322386|gb|ACT26989.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 1435] gi|289414191|gb|EFD11431.1| seryl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289418393|gb|EFD15594.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CPHL_A] gi|289440733|gb|EFD23226.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 605] gi|289545841|gb|EFD49489.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T17] gi|289688203|gb|EFD55691.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 02_1987] gi|289688952|gb|EFD56381.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T92] gi|289696554|gb|EFD63983.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis EAS054] gi|289711526|gb|EFD75542.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis GM 1503] gi|298497103|gb|EFI32397.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 94_M4241A] gi|308213530|gb|EFO72929.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu001] gi|308328286|gb|EFP17137.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu002] gi|308328688|gb|EFP17539.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu003] gi|308336434|gb|EFP25285.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu004] gi|308340028|gb|EFP28879.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu005] gi|308344026|gb|EFP32877.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu006] gi|308347812|gb|EFP36663.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu007] gi|308351748|gb|EFP40599.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu008] gi|308352437|gb|EFP41288.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu009] gi|308360344|gb|EFP49195.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu011] gi|308363977|gb|EFP52828.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu012] gi|323717501|gb|EGB26704.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CDC1551A] gi|326905671|gb|EGE52604.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis W-148] gi|328460610|gb|AEB06033.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 4207] Length = 419 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 152/427 (35%), Positives = 237/427 (55%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + R +P + +L+ D R +I + +RA + + S +G Sbjct: 1 MIDLKLLRENPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAASKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E L L EQ+ E +E E ++ I NV ++ VP G Sbjct: 61 GASPEERP----PLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L V +PS + ++H E+GE+LGL+D R K+SG+RF LTG A L+ L Sbjct: 117 DYAVLD--VVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 Q + L ++G+ P+LVR E M GTG + A++++ +L+ TSEV L Sbjct: 175 QLALKLAV-DNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDGLYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ PLR+ + FR EAGS G+DTRG++R HQF K E D+ E Sbjct: 234 YHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HER+L ++L R+++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD + K + TLNG+ +A R L+AILEN+ DGSV +P L P++ Sbjct: 354 FQARRLATRYRDASGK-PQIAATLNGT-LATTRWLVAILENHQRPDGSVRVPDALVPFV- 410 Query: 419 NLAVIKK 425 + V++ Sbjct: 411 GVEVLEP 417 >gi|262381190|ref|ZP_06074328.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|262296367|gb|EEY84297.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_33B] Length = 424 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 160/428 (37%), Positives = 239/428 (55%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N + + L+K+ + + +L L++K RI +++ A N+ S Sbjct: 1 MLTIKLITENTDAVIRGLEKKHFKGAKESIDKVLELNDKRRIAQNQLDKNLAEVNATSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG +A K S +KE L+ E + L+ L+ IPNVP +EVP GT Sbjct: 61 IGQLMKEGKKEEAEAAKKHVSEIKEVSKALQAEMDQAAEELQNLLYTIPNVPYDEVPEGT 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 SA +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 SAEDNVVEKMGGMETELPKNALPHWELAKKYDLIDFDLGVKITGAGFPVYKGQGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GY E+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARDAGYLEIMPPTVVNSASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML+ E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLNHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYRD N K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRDEN-KKTQLCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALIPY 417 Query: 417 MNNLAVIK 424 +IK Sbjct: 418 T-GFDMIK 424 >gi|315446522|ref|YP_004079401.1| seryl-tRNA synthetase [Mycobacterium sp. Spyr1] gi|315264825|gb|ADU01567.1| seryl-tRNA synthetase [Mycobacterium sp. Spyr1] Length = 419 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 154/428 (35%), Positives = 239/428 (55%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R+NP+ + + + R +P + + D R I +++RA + S S IG Sbjct: 1 MIDPKVLRENPDAVRASQQARGEDPGLVDALAEADSARRAAISAADNLRAEQKSASKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + + L L E++ E ++ ++ I NV ++ VP G Sbjct: 61 KASPDERPA----LLAAAKELSEKVKAAEADQAAAEAAYTAAHMAISNVIIDGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L +P I +++H E+GEALGL+D +R K+SG+RF LTG A L+ L Sbjct: 117 DFVVLDT--VGEPRVIPDAKDHLELGEALGLIDMERGAKVSGSRFYFLTGFGALLQLGLF 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q + T E+G+T + P+LVR E M GTG + AD+++ D +L+ TSEV L Sbjct: 175 QLAVRTAT-ENGFTLMIPPVLVRPEIMRGTGFLGAHADEIYHLAEDDLYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ PLR+ + FR EAGS G+DTRG++R HQF K E R E++ E Sbjct: 234 YHSDEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEEAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L ++L +++ YRV+ + GDLG SA + YD E W+ Q YRE++S S C Sbjct: 294 HDRLLGWQRQLLAAIEVPYRVIDIAAGDLGSSAARKYDCEAWVPTQQTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD N + + TLNG+ +A R L+AILEN+ DGSV IP L P++ Sbjct: 354 FQARRLAVRYRDENGR-PQTAATLNGT-LATTRWLVAILENHQQPDGSVRIPEALVPHV- 410 Query: 419 NLAVIKKE 426 V++ + Sbjct: 411 GTDVLRPK 418 >gi|301311140|ref|ZP_07217068.1| serine--tRNA ligase [Bacteroides sp. 20_3] gi|300830714|gb|EFK61356.1| serine--tRNA ligase [Bacteroides sp. 20_3] Length = 424 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 159/428 (37%), Positives = 238/428 (55%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N + + L+K+ + + +L L++K RI +++ A N+ S Sbjct: 1 MLTIKLIAENTDAVIRGLEKKHFKGAKESIDKVLELNDKRRIAQNQLDKNLAEVNATSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG +A K S +KE L+ E + L+ L+ IPNVP +EVP G Sbjct: 61 IGQLMKEGKKEEAEAAKKHVSEIKEVSKALQAEMDQAAEELQNLLYTIPNVPYDEVPEGI 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 SA +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 SAEDNVVEKMGGMETELPKNALPHWELAKKYDLIDFDLGVKITGAGFPVYKGQGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GY E+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARDAGYLEIMPPTVVNSASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML+ E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLNHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYRD N K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRDEN-KKTQLCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALIPY 417 Query: 417 MNNLAVIK 424 +IK Sbjct: 418 T-GFDMIK 424 >gi|134096775|ref|YP_001102436.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133909398|emb|CAL99510.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 395 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 152/401 (37%), Positives = 226/401 (56%), Gaps = 9/401 (2%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 + +LS DE+ R + + + +RA + Q+G+A + L + L Q+ Sbjct: 2 VDALLSADERRRSAVSRADSLRAEQKQLGKQVGKAAG----EEREHLLKKAKELSAQVKD 57 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 E E+ E +L + + N+ VP G + +L VG P ++H E+G Sbjct: 58 AEAEQAEADQALVEAQKKLSNIVGPGVPPGGEDDYAVLKH-VGVPPEFDFEVKDHLELGT 116 Query: 147 ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAM 206 +LG MD +R K++GARF LTG A LE AL H + +G+T V P+LVR E M Sbjct: 117 SLGAMDMERGAKVAGARFYFLTGIGAQLELALLNMAA-AHATANGFTLVVPPVLVRPEIM 175 Query: 207 YGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 GTG + + +++ D +L+ TSEV L +S EII+ + PLR+ + FR EA Sbjct: 176 EGTGFLGAHSSEVYRLEEDDLYLVGTSEVPLAGYHSGEIIDLGAGPLRYAGWSSCFRREA 235 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GS GRDTRG++R HQF K E+ REED+ EHER+L EE+L ++++ YRV+ G Sbjct: 236 GSYGRDTRGIIRVHQFNKLEMFVYCREEDAVAEHERLLGWEEEMLAKIEVPYRVIDTAAG 295 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS 385 DLG SA + YD E W+ Q YRE++S S C FQ+RR+N+RYR+ + + TLNG+ Sbjct: 296 DLGASAARKYDCEAWIPSQQTYRELTSTSNCTTFQARRLNTRYREADG-PTRIAATLNGT 354 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 +A R ++AILEN+ ADGSV +P LRP++ V++ Sbjct: 355 -LATTRWIVAILENHQQADGSVRVPEALRPFLGGREVLEPT 394 >gi|251800106|ref|YP_003014837.1| seryl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247547732|gb|ACT04751.1| seryl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 425 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 148/427 (34%), Positives = 235/427 (55%), Gaps = 6/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR N E + ++ + ++ +D+ R L ++IE++R RN +I Sbjct: 1 MLDIKWIRNNREEVQTVADRKGIAISISQLVEVDDARRRLQQEIEELRQERNQTIQEINL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +I + V+ K + +++ LE E+ V + L+ +PN+ + PIG S Sbjct: 61 SIYSSDEKDVEQKKLRMKEINQRIASLETEQRAVQAEYADLMQIVPNIVSPDTPIGKSDQ 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ P ++H ++GE +++ R K +G+R LTG A L RA+ Q Sbjct: 121 DNVEVRRFGEPPIFDFEIKDHVKLGELHQMINIPRGVKTAGSRNYYLTGAGAALHRAVQQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 +DL G+T + PL+VR EA++ TG P D + ++L+ TSEV L + Sbjct: 181 LALDL-LMARGFTLLEVPLMVRKEALFNTGFFPLGEDQTYRIDGGDKYLVGTSEVPLISF 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 Y +EI+++ P+R + FRSE GSAG+D G+ R HQF K E V I + E S Sbjct: 240 YDNEIVDASK-PIRLAAASTCFRSEVGSAGKDVHGLYRVHQFSKVEQVIICEDSVEASEQ 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + + AE++L++L+L YRV+++CTGD+ K +D+E W+ + + E S S Sbjct: 299 MLQEITQNAEDLLQQLELPYRVMAVCTGDMSQKTYKQFDIETWMPSRQAFGETHSSSNLL 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N RYRD K L+F HTLN + VA R LI +LE + DGS+ IP LR YM Sbjct: 359 DFQARRSNIRYRDAQGK-LRFCHTLNNTAVASPRILIPLLETHQEEDGSIRIPEALRKYM 417 Query: 418 NNLAVIK 424 N + ++ Sbjct: 418 NGMERLQ 424 >gi|255015191|ref|ZP_05287317.1| seryl-tRNA synthetase [Bacteroides sp. 2_1_7] Length = 424 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 160/428 (37%), Positives = 239/428 (55%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N + + L+K+ + + +L L++K RI +++ A N+ S Sbjct: 1 MLTIKLITENTDAVIRGLEKKHFKGAKESIDKVLELNDKRRIAQNQLDKNLAEVNATSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG +A K S +KE L+ E + L+ L+ IPNVP +EVP GT Sbjct: 61 IGQLMKEGKKEEAEAAKKHVSEIKEVSKALQVEMDQAAEELQNLLYTIPNVPYDEVPEGT 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 SA +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 SAEDNVVEKMGGMETELPKNALPHWELAKKYDLIDFDLGVKITGAGFPVYKGQGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GY E+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARDAGYLEIMPPTVVNSASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML+ E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLNHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYRD N K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRDEN-KKTQLCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALIPY 417 Query: 417 MNNLAVIK 424 +IK Sbjct: 418 T-GFDMIK 424 >gi|315425105|dbj|BAJ46777.1| seryl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] gi|315426870|dbj|BAJ48491.1| seryl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] gi|315428030|dbj|BAJ49618.1| seryl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] Length = 427 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 159/428 (37%), Positives = 246/428 (57%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+I+ +R NP ++KR P+ + IL LDE+ R ++K ++++R RRN + +I Sbjct: 1 MLNIKAVRTNPGFYRAGMEKRRRPPEIVDEILGLDEEKRSIMKTLQELRHRRNLAAEKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A G D + E + +++ LE EV + L+ L+ PN P E VP G + Sbjct: 61 AAKKRG--EKTDHILLEMQEVNQKIEELESRLTEVDNRLETLLKTAPNPPHESVPDGETE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+++RS G +P R+H ++ ALGL D + A K++GARF L L L AL Sbjct: 119 EDNVVVRSWG-EPRRGEWMRDHVDVLAALGLADLETAAKVAGARFYYLFDDLVLLNWALV 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 Q+ +D G+ V P ++ + M G F D ++ + +LI T+E L Sbjct: 178 QYGLDF-LKGKGFRLVQPPYMLTRKIMEGVVSFQDFEDMLYKVEGEDLYLIGTAEHPLAG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L++ EI++ + LPLR+ ++P FR EAG+ G+DT+G+ R HQF K E S T+ S+ E Sbjct: 237 LHAGEILDGRKLPLRYAGISPCFRKEAGAHGKDTKGIFRVHQFEKVEQFSFTKPSQSWAE 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE ++S AEE+ + L L YRVV++C G+LG A K YDLEVW+ QN YRE+ SCS C + Sbjct: 297 HEFLISNAEELYRSLGLPYRVVNICVGELGPVAAKKYDLEVWMPAQNKYREVVSCSNCTD 356 Query: 359 FQSRRMNSRYRDPNS-KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +Q+ + RYR+ + + HTLN + +A R ++AILENY DG+V IP L+ Y+ Sbjct: 357 YQAVGLGIRYREAPHIEETDYVHTLNSTLIATERTIVAILENYQTRDGAVEIPEPLQHYL 416 Query: 418 NNLAVIKK 425 + +I+ Sbjct: 417 HGQKIIRP 424 >gi|307110880|gb|EFN59115.1| hypothetical protein CHLNCDRAFT_55978 [Chlorella variabilis] Length = 551 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 134/483 (27%), Positives = 213/483 (44%), Gaps = 59/483 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D + +R N E + + R + + L E+ ++ + +RA RN NS G Sbjct: 72 IDFKSLRDNVEAVAANCRNRLSKADPHLVARLYEEYVGAQQETDKLRAARNENS---GAM 128 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + AL +KE L LE + + L++ +PN+ + Sbjct: 129 KGKLDPEQRAALIERGKQIKEGLEGLEARLEALEAELQREGQRLPNMTHPGACGRRHGSR 188 Query: 122 NILIR---------------------------SVGKKPSAIHLSREHFEIGEALGLMDFD 154 +VG++P+ ++H ++GE L L+DF+ Sbjct: 189 VASDELAGAPFSTGQSQCHVPIGGEEASAVLATVGQRPAFDFPVKDHLQLGEELDLIDFE 248 Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 +SGA+F L A LE AL + + G+T + P LVR+ G P+ Sbjct: 249 TGGVVSGAKFYYLRNEAALLELALVNWTMQR-VVAAGFTPIITPDLVRESVFEKCGFQPR 307 Query: 215 FADDMFCTTDG--RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + + L T+E+ L + I+ LPLR FR+EAG+AG + Sbjct: 308 ADNTQIYSVQDSAMCLTGTAEIPLGGVAMDRILAEAQLPLRMAAFGHCFRTEAGAAGSAS 367 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 +G+ R HQF K E+ + E S H+++L + L LH++V+ + + DLG A Sbjct: 368 KGLYRVHQFSKVEMFVVCTPEQSDAVHQQLLDLEVGLFSDLGLHFKVLDMASHDLGAPAY 427 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK------------------ 374 + YD+E W+ G Y EISS S C ++QSRR+N RYR + Sbjct: 428 RKYDIEAWMPGMERYGEISSASNCTDYQSRRLNIRYRPAADEAAAEAAAAAGGNGKGGKK 487 Query: 375 --------SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 +F HTLN + AV R ++AILENY ADG+V IP VLRP+M + VI+ + Sbjct: 488 KGGGARKVPTQFAHTLNATACAVPRMIVAILENYQQADGTVLIPEVLRPFMMGMEVIRPK 547 Query: 427 HIL 429 + Sbjct: 548 KVA 550 >gi|300782127|ref|YP_003762418.1| seryl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299791641|gb|ADJ42016.1| seryl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 394 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 139/401 (34%), Positives = 216/401 (53%), Gaps = 9/401 (2%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 + +LSLD + R I + +R + QI +A E L L Q+ Sbjct: 2 VDKLLSLDARRRSSIAAADKLRNEQKLLGKQIPKAPPEEK----QQLLATAKELAAQVKA 57 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 E E++ +L +PN+ + P+G + ++ VG+ ++H E+ E Sbjct: 58 AEVEQNTASEEFDQLFRTVPNLVHPDAPVGGEDDFTVVKH-VGEPTKLGFTPKDHLELLE 116 Query: 147 ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAM 206 ALG +D +R K+SG+RF LTG A L+ L I E+G+T + P LVR E M Sbjct: 117 ALGGVDMERGAKVSGSRFYFLTGVGAQLQLGLLNMAI-AQALENGFTPMITPSLVRPEIM 175 Query: 207 YGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 GTG + + + +++ D +L+ TSEV L ++ EI++ P R+ + +R EA Sbjct: 176 AGTGFLGQHSSEIYHLADDDLYLVGTSEVPLAGFHADEILDLNDGPNRYAGWSSCYRREA 235 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GS G+DTRG++R HQF K E+ + D+ EHER+L E++L ++++ YRV+ TG Sbjct: 236 GSYGKDTRGIIRVHQFDKVEMFVYAKPADAEAEHERLLGWEEQMLAKIEVPYRVIDTATG 295 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS 385 DLG SA + +D E W+ Q YRE++S S C FQ+RR+ RYRD N K + TLNG+ Sbjct: 296 DLGTSAHRKFDCEAWIPTQETYRELTSTSNCTTFQARRLAIRYRDDNGK-PQIAATLNGT 354 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 +A R ++AI+EN+ DGSV +P LRP++ V+ Sbjct: 355 -LATTRWIVAIVENHQQEDGSVRVPEALRPFVGGKEVLTPR 394 >gi|150007194|ref|YP_001301937.1| seryl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|298377619|ref|ZP_06987571.1| serine--tRNA ligase [Bacteroides sp. 3_1_19] gi|149935618|gb|ABR42315.1| seryl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|298265638|gb|EFI07299.1| serine--tRNA ligase [Bacteroides sp. 3_1_19] Length = 424 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 159/428 (37%), Positives = 238/428 (55%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N + + L+K+ + + +L L++K RI +++ A N+ S Sbjct: 1 MLTIKLITENTDAVIRGLEKKHFKGAKESIDKVLELNDKRRIAQNQLDKNLAEVNATSKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG +A K S +KE L+ E + L+ L+ IPNVP +EVP G Sbjct: 61 IGQLMKEGKKEEAEAAKKHVSEIKEVSKALQVEMDQAAEELQNLLYTIPNVPYDEVPEGI 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 SA +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 SAEDNVVEKMGGMETELPKNALPHWELAKKYDLIDFDLGVKITGAGFPVYKGQGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GY E+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARDAGYLEIMPPTVVNSASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML+ E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLNHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYRD N K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRDEN-KKTQLCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALIPY 417 Query: 417 MNNLAVIK 424 +IK Sbjct: 418 T-GFDMIK 424 >gi|260904847|ref|ZP_05913169.1| seryl-tRNA synthetase [Brevibacterium linens BL2] Length = 426 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 152/430 (35%), Positives = 224/430 (52%), Gaps = 10/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D+ +R+NP+ + + R + +L+ D R I ED RA + S S+QI Sbjct: 1 MIDLALLRENPDLFKASQEARGSSVDLVDEVLAADSARRSAITAFEDARADQKSFSSQIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKE-QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 +A + +L+ A K +++ +K Q E + K + +P + Sbjct: 61 KAPKDEKPALIAAGKEKSAKVKALQAESEEATFAFDKLASKLPNLIVEGIPSGGEENFVT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 R S +H EIGE L +D R TK++G+RF LTG A LE AL Sbjct: 121 LKTVGEPRDFS---SDGFEPADHLEIGETLKAIDTARGTKVAGSRFHYLTGFGAKLEMAL 177 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 D+ E G+ P LV+ E M GTG + + AD+++ D +L+ TSEV L Sbjct: 178 LNLARDV-AEEAGFIPTITPTLVKPEVMRGTGFLGEHADEVYRLEADDLFLVGTSEVPLA 236 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 L+ EII+ PLR+ ++ +R EAGS G+DTRG++R HQF K E+ + E++ Sbjct: 237 GLHMDEIIDLSDGPLRYAGISSCYRREAGSYGKDTRGIIRVHQFQKVEMFAYVEIENAEA 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EHERMLS E++L +L YRV+ GDLG SA + +D E W+ Q YRE++S S C Sbjct: 297 EHERMLSLQEKMLGLCELPYRVIDTAAGDLGDSAARKFDCEAWVPTQGTYRELTSTSNCT 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR+ R R + + TLNG+ +A R L+ ILEN+ ADGSVT+P LRPY+ Sbjct: 357 TFQARRLQVRERY--DGATRPVATLNGT-MANTRWLVPILENHQQADGSVTVPAALRPYL 413 Query: 418 NNLAVIKKEH 427 + E Sbjct: 414 GGMTAQGPEG 423 >gi|283780181|ref|YP_003370936.1| seryl-tRNA synthetase [Pirellula staleyi DSM 6068] gi|283438634|gb|ADB17076.1| seryl-tRNA synthetase [Pirellula staleyi DSM 6068] Length = 427 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 126/432 (29%), Positives = 223/432 (51%), Gaps = 10/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I N + R + + + ++ L+ + R + +++++ + N + IG+ Sbjct: 1 MLDRKFIVDNVSLIQQNCTSRGVTCEVDRLVDLETRRRDIASQVQELNRQANEVAKSIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + K + L++Q + E + + + + IPN+ + P+G A+ Sbjct: 61 AK---DAEEREQRKEDGRRLRDQKDAAQAELDRLETQIHAIQITIPNLTHPDAPVGGEAD 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + V +R+H E+ E L+DFD +++G F L LE AL + Sbjct: 118 ARDVKLGVTPIRPLGFKARDHVELSEKCQLIDFDSGARVAGHGFYFLKNEGVLLELALER 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 + +++ G+T + P L R+E + G G P+ + L+ T+E++L Sbjct: 178 YALEI-LMRRGFTPTTTPDLAREEILVGIGFNPRGPETQIYSIENSDLSLVGTAEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y+ + ++ + LP++ ++ FR+EAG+AG+ +RG+ R HQF K E+ + T + S Sbjct: 237 MYADQTVDLEQLPIKLAGISHCFRTEAGAAGKASRGIYRVHQFTKVEMFAFTLPDQSDAM 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCST 355 HE +L E+ L + YRV+ +GDLG A + YDLE W+ G+ Y E++S S Sbjct: 297 HEELLEIECELFDGLGIPYRVIDTASGDLGGPAYRKYDLEAWMPGRGTAGEYGEVTSTSN 356 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+N RYR K HTLNG+ +A+ R LIA+LENY ADGS+ +P LR Sbjct: 357 CTDYQSRRLNIRYRIKGEKGTHLVHTLNGTAIAISRALIAVLENYQQADGSIVVPEPLRL 416 Query: 416 YMNNLAVIKKEH 427 ++ +I+ Sbjct: 417 WV-GKDLIQPRQ 427 >gi|260203041|ref|ZP_05770532.1| seryl-tRNA synthetase [Mycobacterium tuberculosis K85] gi|289572486|ref|ZP_06452713.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis K85] gi|289536917|gb|EFD41495.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis K85] Length = 419 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 152/427 (35%), Positives = 237/427 (55%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + R +P + +L+ D R +I + +RA + + S +G Sbjct: 1 MIDLKLLRENPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAASKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E L L EQ+ E +E E ++ I NV ++ VP G Sbjct: 61 GASPEERP----PLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L V +PS + ++H E+GE+LGL+D R K+SG+RF LTG A L+ L Sbjct: 117 DYAVLD--VVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 Q + L ++G+ P+LVR E M GTG + A++++ +L+ TSEV L Sbjct: 175 QLALKLAV-DNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDGLYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ PLR+ + FR EAGS G+DTRG++R HQF K E D+ E Sbjct: 234 YHSGEILDLSRGPLRYAGCSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HER+L ++L R+++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD + K + TLNG+ +A R L+AILEN+ DGSV +P L P++ Sbjct: 354 FQARRLATRYRDASGK-PQIAATLNGT-LATTRWLVAILENHQRPDGSVRVPDALVPFV- 410 Query: 419 NLAVIKK 425 + V++ Sbjct: 411 GVEVLEP 417 >gi|15612438|ref|NP_224091.1| seryl-tRNA synthetase [Helicobacter pylori J99] gi|8928387|sp|Q9ZJD9|SYS_HELPJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|4155982|gb|AAD06944.1| SERYL-TRNA SYNTHETASE [Helicobacter pylori J99] Length = 415 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 172/420 (40%), Positives = 261/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ ++ + E + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFDKVALSLKKRNHAMDDELERLREAIAHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ + LK E K +L L K E + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQKMDT--SDLKKELENNKIKLNELSKSVGEAEQEMDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|167043861|gb|ABZ08550.1| putative tRNA synthetase class II core domain (G, H, P, S and T) [uncultured marine crenarchaeote HF4000_APKG3E18] Length = 419 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 168/424 (39%), Positives = 253/424 (59%), Gaps = 6/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR+NPE++ LK R ++ + +L LD+K R +I +++R ++N S +I + Sbjct: 1 MLDMKMIRENPENIRKMLKDRAVQFDLDLLLELDKKRREMILSTDNLRKKKNEMSIKISE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G S L E + ++L LE+ +HE S KL IPNV + VP + Sbjct: 61 AKKTG--SEAVPLIQEMQLVSQELAKLEEVQHETESEYSKLALTIPNVLHKSVP-CGDDS 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N IR G P ++H +I E L L++ +RA K +GARF L G L L ++L Q Sbjct: 118 ANKEIRKWGTIPQFDFEVKDHIDISENLNLLELERAAKTAGARFYYLMGDLVKLNQSLIQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 F +D SE GYT P ++ +AM G + F D ++ +LI TSE ++ ++ Sbjct: 178 FGLDF-LSEKGYTMSQPPYMINRKAMEGAVILDDFEDVIYKIEDQDLYLIGTSEHAMVSM 236 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ EI++ SLP R++ ++P FR EAG+ G+D +G+ R HQF K E ++ EDS+ EH Sbjct: 237 YADEILDGNSLPARYSAISPCFRKEAGAHGKDQKGIFRVHQFEKIEQFVFSKPEDSWNEH 296 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M++ EE ++L++ ++VV L +GD+G + KTYDLEVW+AGQN YRE+ SCS C ++ Sbjct: 297 ENMIAITEEFFQKLEIPHKVVLLSSGDMGKISAKTYDLEVWMAGQNAYREVVSCSNCLDY 356 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 QSRR+ R+RD ++ K+ HTLN + VA R ++AILEN DG V IP VL+ YM Sbjct: 357 QSRRLKIRFRDKTNEDTKYIHTLNSTLVATERTMVAILENLQTKDGHVNIPNVLQKYM-G 415 Query: 420 LAVI 423 +I Sbjct: 416 KKII 419 >gi|307638135|gb|ADN80585.1| Seryl-tRNA synthetase [Helicobacter pylori 908] gi|325996735|gb|ADZ52140.1| Seryl-tRNA synthetase [Helicobacter pylori 2018] gi|325998329|gb|ADZ50537.1| Seryl-tRNA synthetase [Helicobacter pylori 2017] Length = 415 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 171/420 (40%), Positives = 260/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ ++ + E + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFDKVALSLKKRNDAMDDELERLREAITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ + LK E K +L L K E + +S IPN+ E+ P+G + Sbjct: 61 GIKMAQKMDT--SDLKKELENNKIKLNELSKSVGEAEQEMDLKLSIIPNLVDEKTPLGAN 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRVFNFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGLGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IYLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQECMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|6094413|sp|O81983|SYS_HELAN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|3451411|emb|CAB11470.1| seryl-tRNA synthetase [Helianthus annuus] Length = 438 Score = 344 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 219/435 (50%), Gaps = 17/435 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ NPE + + ++R + + I+ LD++ R ++E +R N + Sbjct: 1 MLDINLFREEKGGNPEIVRESQRRRGASVEIVDEIIKLDKEWRQRQFELEQLRKDFNRIN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 ++ + G +L T K+ + E E ++L + + N+ + VP+ Sbjct: 61 KEVAKLRISGG--DASSLIKNTEENKDSTAKKQAEVQEARTALYSKLETVGNLVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 +N ++R+ G++ +L + H E+ E LG+ D + ++G R L G L Sbjct: 119 SNDEADNAVVRTWGERREETNL-KNHVELVELLGIADLKKGANVAGGRGYYLKGDGVRLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +AL F +D + YT + P +R + M Q+ +F ++++ T D ++LI T+ Sbjct: 178 QALINFGLDF-LEKRKYTALQTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATA 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LPLR+ + FR EAGS GRDT G+ R HQF K E +T+ Sbjct: 237 EQPLCAYHIDDWIHPNELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTKP 296 Query: 293 --EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 DS+ HE M+ +EE + L L Y+VVS+ +G L +A K YDLE W YRE+ Sbjct: 297 SGNDSWEMHEEMIKNSEEFYQMLKLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTYREL 356 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C ++QSR++ R + N ++ ++ H LN + A R L ILENY G V Sbjct: 357 VSCSNCTDYQSRKLEIRCGQKKGNEQAKQYCHLLNSTLTATERTLCCILENYQTEKG-VA 415 Query: 409 IPTVLRPYMNNLAVI 423 IP VL+P+M + Sbjct: 416 IPEVLQPFMGGKTFL 430 >gi|15646089|ref|NP_208271.1| seryl-tRNA synthetase [Helicobacter pylori 26695] gi|3024679|sp|P56458|SYS_HELPY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|2314654|gb|AAD08517.1| seryl-tRNA synthetase (serS) [Helicobacter pylori 26695] Length = 415 Score = 344 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 172/420 (40%), Positives = 262/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFDKVALSLKKRNNAMDDELERLREVITHYKKRLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+GT+ Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGTN 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRVFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|50954101|ref|YP_061389.1| seryl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] gi|81826708|sp|Q6AH61|SYS_LEIXX RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|50950583|gb|AAT88284.1| seryl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 421 Score = 344 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 150/427 (35%), Positives = 234/427 (54%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R++P+ L + + R Q + L +D + R I E++RA +N+ ++ Sbjct: 1 MIDPVLLREHPDVLRRSQEARGDSVQLVDEALQVDIERRAAITAFEELRAEQNAFGKRVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + L + L ++ ++ + + ++ I N + VP G Sbjct: 61 QAPKQEKKE----LVAQAQQLAGRVKEAQQVAAAAEARFESVLRKIGNPVVAGVPSGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L VG P+ R+H +GE LG +D R K+SGARFS L G A LE AL Sbjct: 117 DYAVLKE-VGGIPAFGFEPRDHLALGELLGAIDMARGAKVSGARFSFLRGLGARLEIALM 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 +D +G+ + P LV+ E M GTG + + +D+++ TD +L TSEV+L Sbjct: 176 NLALDKAL-ANGFVPLITPTLVKPEVMQGTGFLGEHSDEVYHLETDDLYLTGTSEVALAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ PLR+ + +R EAGSAG+DTRG++R HQF K E+ T E + E Sbjct: 235 YHADEILDVTE-PLRYAGWSTCYRREAGSAGKDTRGIIRVHQFTKLEMFVYTLPEHAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H R+L+ EE+++ L L YRV+ GDLG SA + YD+E W+ Q YRE++S S CG Sbjct: 294 HARLLAWQEEMMQALGLSYRVIDTAAGDLGSSAARKYDVEAWIPTQGRYRELTSTSNCGT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYR + K TLNG+ +A R ++AILE + DGSV +P LRPY+ Sbjct: 354 FQARRLETRYRTESGK-TAPVATLNGT-LATTRWIVAILETHQREDGSVLVPETLRPYLG 411 Query: 419 NLAVIKK 425 L +++ Sbjct: 412 GLEILEP 418 >gi|308185250|ref|YP_003929383.1| seryl-tRNA synthetase [Helicobacter pylori SJM180] gi|308061170|gb|ADO03066.1| seryl-tRNA synthetase [Helicobacter pylori SJM180] Length = 415 Score = 344 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 170/420 (40%), Positives = 261/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ ++ + E + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFDKVALSLKKRNNAMDDELERLHEAITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ + LK E K +L L K E+ + +S IPN+ E+ P+G + Sbjct: 61 GIKMAQ--KADTSDLKKELENNKIKLNELSKSVDELEQQIDLKLSIIPNLVDEKTPLGAN 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQKNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQECMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|317010146|gb|ADU80726.1| seryl-tRNA synthetase [Helicobacter pylori India7] Length = 415 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 172/420 (40%), Positives = 262/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ ++ + E + + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFDRVALSLKKRNNAMDDELERLREVITRYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELYKSVDELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRVFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPTSEV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTSEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIVSVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQECMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|152964219|ref|YP_001360003.1| seryl-tRNA synthetase [Kineococcus radiotolerans SRS30216] gi|151358736|gb|ABS01739.1| seryl-tRNA synthetase [Kineococcus radiotolerans SRS30216] Length = 431 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 143/428 (33%), Positives = 224/428 (52%), Gaps = 11/428 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++ +R P+ + + + R + + +L D + R I + E +RA + S + Sbjct: 9 IDLRLLRDEPDVVRASQRARGEDEGVVDRVLDADARRRASIAEFEQLRAEQKSRGKLVAA 68 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E L L E++ E +E + L+ IPNV + VP G + Sbjct: 69 AKGEEK----QQLLAGVKELSERVKAAEARSNEAGEEFEALLRSIPNVVEDGVPAGGEDD 124 Query: 121 ENILIRSVGKK--PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +L P + R+H ++GE LG +D +R K++G+RF LTG A LE AL Sbjct: 125 YVVLEEVGSPPSLPEGLDAWRDHLDLGERLGAIDMERGAKVAGSRFYFLTGVGALLELAL 184 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 + +G+T + P LV+ E M GTG + A +++ D +L TSEV+L Sbjct: 185 LNLAVAKAV-ANGFTPMITPTLVKPEVMAGTGFLGAHAAEVYHLEEDDLYLTGTSEVALA 243 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 + EI++ + P R+ + +R EAGS G+DTRG++R HQF K E+ S R ED+ Sbjct: 244 GYHGDEILDLSAGPKRYAGWSACYRREAGSYGKDTRGVIRVHQFHKVEMFSYCRPEDAAA 303 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EH R+L +++L +++ YRV+ GDLG SA + +D E W+ Q YRE+SS S C Sbjct: 304 EHRRLLGFEKDMLAAVEVPYRVIDTAAGDLGSSAARKFDCEAWVPSQGTYRELSSTSNCT 363 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR+ R R + TLNG+ +A R ++AILEN+ ADGSV +P L+P++ Sbjct: 364 TFQARRLGVRERLEEGSGTRPVATLNGT-LATTRWIVAILENHQQADGSVRVPAALQPFL 422 Query: 418 NNLAVIKK 425 L V+ Sbjct: 423 -GLEVLTP 429 >gi|297812973|ref|XP_002874370.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata] gi|297320207|gb|EFH50629.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata] Length = 434 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 131/436 (30%), Positives = 209/436 (47%), Gaps = 16/436 (3%) Query: 3 DIQWIRQ----NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 DI R+ NPE + + ++R + I+ +D++ R +++ R N + Sbjct: 2 DINLFREEKGNNPEIIRESQRRRFSNVDVVDEIIQVDKEWRQRQFEVDSFRNEFNKLNKH 61 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP--I 115 + Q + + +T K+ E E E ++L+ + N+ + VP Sbjct: 62 VAQLKIA--KADATEIIQQTEKNKQDATAREVEVREAFATLQAKLLTFGNLVHDSVPFDK 119 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 + N I + + + + H ++ E LG+ D R ++G R L G L Sbjct: 120 DEANNLVIKLFGEKRFSTPDLKLKNHVDLVELLGIADTKRGADIAGGRGYFLKGFGVRLN 179 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +AL F +D + G+T + P +R + M Q+ +F ++++ T D ++LI T+ Sbjct: 180 QALINFALDS-LEDRGFTPLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKFLIATA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + ++ I LP R+ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 239 EQPLCAYHRNQTIHPSELPKRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITAP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 DS+ E ML +EE + L + YRVVS+ +G L +A K YDLE W YRE+ S Sbjct: 299 NDSWAMLEEMLKNSEEFYQALKIPYRVVSVVSGALNDAAAKKYDLEGWFPASETYRELVS 358 Query: 353 CSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 CS C ++QSRR++ RY ++ ++ H LN + A R + ILENY DG V IP Sbjct: 359 CSNCTDYQSRRLDIRYGQNKSKDQTKQYVHMLNSTLTATERTICCILENYQREDG-VDIP 417 Query: 411 TVLRPYMNNLAVIKKE 426 VL+PYM + + Sbjct: 418 DVLQPYMGGKKFMPFK 433 >gi|254168019|ref|ZP_04874867.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289596026|ref|YP_003482722.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197623062|gb|EDY35629.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289533813|gb|ADD08160.1| seryl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 442 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 155/447 (34%), Positives = 244/447 (54%), Gaps = 28/447 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ IR+N + + L+KR + + + IL D R +K+IE +R RN S +IG Sbjct: 1 MIDIKLIRKNGDMIRDMLRKRFKDEKIVDEILQYDNLWRETLKEIEKLRHERNKKSVEIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + EG + LK+E L ++ LE+ E L+ +PN+ L++ P+ Sbjct: 61 KLVKEGK--DIKELKDEMKELNRRIKELEENVEEYKKRRDYLLMRLPNLLLDDTPVCEGE 118 Query: 120 NENILIRSVGKKPSAIHL-------------------SREHFEIGEALGLMDFDRATKLS 160 + ++R+ GK H +I E L D RA K++ Sbjct: 119 ENSPVVRTWGKARVMEDNMEYFKNCSAGMDYEIIENKPESHVDIIEKYDLADTARAGKIA 178 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 GARF L L LE++L +F +D H GYT V+ PL++R AM G F + ++ Sbjct: 179 GARFYYLKNELVILEQSLIRFALD-HMVSKGYTPVAPPLMIRRAAMEGVIDFEAFEEMIY 237 Query: 221 CTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + ++I T+E L ++ EI++ SLPL++ ++P FR EAG+ G+DT+G+ R H Sbjct: 238 KIEGEDLYMIATAEHPLVAMHMKEILDPNSLPLKYVGISPCFRKEAGAHGKDTKGIFRVH 297 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 F+K E V ++ E+S E ++ AEEIL++L+L YRV+++C+G+LG A K YD+EV Sbjct: 298 NFYKVEQVVFSKPEESAILMEELIKNAEEILQKLELPYRVINICSGELGAVAAKKYDIEV 357 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q +RE+ SCS C +Q+RR+ RYRD LKF HTLN + +A R ++AI+EN Sbjct: 358 WMPAQQKFREVVSCSNCLEYQARRLMIRYRDKGE--LKFVHTLNSTALATTRIMVAIMEN 415 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKE 426 + D + IP L PY + I+ E Sbjct: 416 FQ-EDRGIRIPKALVPYTS-FEYIEFE 440 >gi|119714441|ref|YP_921406.1| seryl-tRNA synthetase [Nocardioides sp. JS614] gi|166222755|sp|A1SD34|SYS_NOCSJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|119535102|gb|ABL79719.1| seryl-tRNA synthetase [Nocardioides sp. JS614] Length = 424 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 152/429 (35%), Positives = 236/429 (55%), Gaps = 12/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R P+ + A KR L + ++ LS D + R I E RA + I Sbjct: 1 MIDPRVLRDEPDRVRAAQVKRGLSDEVVDHALSADGERRRAIAAFEAKRAEQKQLGKLIP 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E AL +T TL ++ E + + + + IPN+ +E P G Sbjct: 61 QAQGEEK----QALLAQTKTLAAEVKQAEAAQAVAEEAWQAALMSIPNLAADEAPAGGED 116 Query: 120 NENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + I + + R+H E+G LG +D DR K+SG+RF LTG A LE A Sbjct: 117 DYVVLEEIGTPRDFAADGFEPRDHIELGRMLGAIDLDRGAKVSGSRFYFLTGAGAELELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L + E G+T V AP +V+ AM GTG + + ADD++ +L+ TSEV + Sbjct: 177 LVNLAMQ-QARESGFTPVIAPSMVKPRAMDGTGFLGQAADDVYRIEGQDMYLVGTSEVPM 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ +LPLR+ +P FR EAGS G+DT+G++R H F K E+ T E+S+ Sbjct: 236 AAYHSDEILDGGALPLRYAAFSPCFRKEAGSHGKDTKGIIRVHWFDKVEMFVYTTTEESY 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH+R+L+ +E L++L+L YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHQRLLAWEKEFLEKLELAYRVIDVAAGDLGLSAQRKFDCEAWIPTQGRYRELTSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR+++R R ++ TLNG+ A+ R ++A+LE + ADGSV +P L+P+ Sbjct: 356 TEFQTRRLDTRGRF--GSEIRPISTLNGTLCAITRTIVAVLETHQQADGSVRVPKALQPW 413 Query: 417 MNNLAVIKK 425 + V++ Sbjct: 414 L-GREVLEP 421 >gi|269115194|ref|YP_003302957.1| seryl-tRNA synthetase [Mycoplasma hominis] gi|268322819|emb|CAX37554.1| Seryl-tRNA synthetase [Mycoplasma hominis ATCC 23114] Length = 421 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 175/427 (40%), Positives = 253/427 (59%), Gaps = 9/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD+++I N + L R+ E I +K LI +E ++A+RN S QIG Sbjct: 1 MLDLKYIISNKNEVIKKLSTRNFNIAIIEEIFEDAQKRNELIHNLETLQAKRNKLSEQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N L + + +KEQ+ +++E + + L+ IPN+P +EVP+G Sbjct: 61 INKR--NKQDCSELLQQVAEVKEQIEKIDEEADTLVKKVNTLLYQIPNLPYDEVPVGRDE 118 Query: 120 NENILIRSVGK-KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++N++++ + H+EI L ++DF R+ KL+ RF + A L R+L Sbjct: 119 DDNVVLKEHPNLGRGLVKGVLPHYEIATKLDIVDFVRSVKLASTRFVLYKNDGAKLVRSL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 FM+D H +GY E+ LV +YGTGQ+PKFA+D+F + WLIPT+EV +T Sbjct: 179 ASFMLDTHI-ANGYKELMPAHLVNSNMLYGTGQLPKFAEDLFKMQGNDLWLIPTAEVPVT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y EI++ P +F FRSEAGS+G+DT+G++RQH+F K ELV IT E+D+ Sbjct: 238 NYYYDEILDLSK-PKKFVAYTKCFRSEAGSSGKDTKGLIRQHEFHKVELVKITSEKDAMK 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E M++ A+ IL+ L++ YR + L TGD+GFS+ KT DLE+W+ + YRE SS S C Sbjct: 297 EWELMVNDAKSILELLEIPYREMMLSTGDIGFSSAKTIDLELWIPSEQRYRETSSISICR 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ RR RYRD N K+ +T+NGSG+A+ R + AILENY N DGS+TIP VL PYM Sbjct: 357 DFQGRRAKIRYRDENG-HTKYAYTMNGSGLAIDRVVAAILENYQNPDGSITIPKVLVPYM 415 Query: 418 NNLAVIK 424 VIK Sbjct: 416 -GKEVIK 421 >gi|300775357|ref|ZP_07085219.1| serine--tRNA ligase [Chryseobacterium gleum ATCC 35910] gi|300506097|gb|EFK37233.1| serine--tRNA ligase [Chryseobacterium gleum ATCC 35910] Length = 422 Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats. Identities = 144/419 (34%), Positives = 232/419 (55%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + ++R N E + LKKR + + ++ D++ + + +++ + N S +I Sbjct: 1 MLQVNFLRDNKERVLEGLKKRQFKNLELVDEAIAADDERKRIQFELDSQLSEINKISKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + EG ++ K++T+ KE L+ + + L ++ +PN+P V G S Sbjct: 61 GLLMKEGKKEEAESAKSKTAQYKESSSELKSQLEVKENDLLNILYQLPNIPNALVKSGAS 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A++N +I + H+E+ + L+DF+ K++GA F V G A L+RAL Sbjct: 121 ADDNEIIFQSHPVEGLGEGAIPHWELAKKYNLIDFELGVKIAGAGFPVYLGKGARLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLT 237 Q+ +D + E GYTEV+ P +V + + +GTGQ+P M+ + +LIPT+EV +T Sbjct: 181 VQYFLDKNV-EKGYTEVNPPHVVNEASGFGTGQLPDKEGQMYYINEDKLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY + + K LP++ T + +R EAGS G RG+ R HQF K E+V I + E+S+ Sbjct: 240 NLYRDVLFDEKDLPVKNTAFSQCYRREAGSYGAHVRGLNRLHQFEKVEIVRIEKPENSYA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ +EIL L+L +RV+ LC GD GF++ TYD EVW A Q ++ E+SS S Sbjct: 300 VLEEMVEHIKEILTDLELPFRVLRLCGGDTGFASAMTYDFEVWSAAQEMWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+ R+ RY+ + HTLNGS +A+ R + A+LEN ADG + +P + Y Sbjct: 360 TFQANRLKCRYKA--DGKSQLVHTLNGSAMALPRIMAALLENNQTADG-IKLPKKIAEY 415 >gi|149919214|ref|ZP_01907697.1| seryl-tRNA synthetase [Plesiocystis pacifica SIR-1] gi|149819928|gb|EDM79350.1| seryl-tRNA synthetase [Plesiocystis pacifica SIR-1] Length = 456 Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats. Identities = 145/456 (31%), Positives = 236/456 (51%), Gaps = 32/456 (7%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL----EPQ------------SEYILSLDEKNRILIKKI 44 MLDI+ +R++PE + L R++ + E + + D+K R LI Sbjct: 3 MLDIKLLREDPERIAANLHDRNVQVFPDLDSEQAGESWAKATVERLRAYDQKVRDLIAAG 62 Query: 45 EDIRARRNSNS---AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 +++R +N NS ++G+ + + L L+EQ + ++ E ++ + Sbjct: 63 DNLRREQNENSSAMKKVGKLAKDEQQAARTPLIERGRELREQEKQIAEQHAEAIAARDEA 122 Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSA---IHLSREHFEIGEALGLMDFDRATK 158 +PN+ +VP G + +++ +R+ G++ ++H +I EAL L+DF K Sbjct: 123 WRRVPNLSHPDVPKGHTDDDHAQLRTWGERRDFAAEGFEPKDHLDIAEALDLVDFASGAK 182 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 ++G +F L L+ AL ++ +D +HG+ + P L R + + G G P+ Sbjct: 183 VAGQKFYYLVNEAVLLDLALQRYALD-MARKHGFKLHTTPDLARVDILDGLGFNPRGEST 241 Query: 219 MFC--TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 L+ T+E++L + + EI++ + LPL L+ FR+EAGSAG+++RG+ Sbjct: 242 QVYSVANSDLCLVGTAEITLGGMVADEILDPEQLPLLVAGLSHCFRTEAGSAGKESRGLY 301 Query: 277 RQHQFWKCELVSIT--REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 R HQF K EL + T E S H+RML EEI + L++ YRV+ + +GDLG A + Sbjct: 302 RVHQFTKVELFAFTVGELELSEAMHQRMLDIEEEIFQGLEIPYRVLDIASGDLGGPAYRK 361 Query: 335 YDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR----DPNSKSLKFTHTLNGSGVAVG 390 YDLE W+ G+ + EI+S S C ++Q+RR+ RYR D + K H LNG+ VA Sbjct: 362 YDLEAWMPGRGGWGEITSTSNCTDYQARRLRIRYRPAPVDGKKQKPKMVHMLNGTAVATS 421 Query: 391 RCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 R L+AILEN ADGSV IP L+PY I Sbjct: 422 RALVAILENNQQADGSVRIPAALQPYC-GFDRIGPR 456 >gi|310644660|ref|YP_003949419.1| seryl-tRNA synthetase [Paenibacillus polymyxa SC2] gi|309249611|gb|ADO59178.1| Seryl-tRNA synthetase [Paenibacillus polymyxa SC2] Length = 429 Score = 342 bits (877), Expect = 7e-92, Method: Composition-based stats. Identities = 147/420 (35%), Positives = 230/420 (54%), Gaps = 6/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR++ E + A + ++ +L+LD++ + L++++E +R RN S IG Sbjct: 1 MLDIKWIREHQEQVQRAADDKGIQVSVAELLTLDDRRKQLLQEVEQLRQTRNQCSQDIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 I G + K + + +L ++E + EV ++L+ +PN+ + P G + Sbjct: 61 LIHTGKNEQAERAKRQVKEINGRLDLMEVPQQEVEEQFQQLLLLMPNIVSPDTPWGRTDE 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + VG P ++H +G+ L+D R K +G R LTG L RA+ Q Sbjct: 121 DNVELERVGTIPEFGFEPKDHMTLGQLHNLIDVHRGVKTAGTRNYYLTGAGVALHRAVQQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 +DL SE G+ + PL+VR EAM TG P D + + +WL+ TSEV L + Sbjct: 181 LAVDL-LSERGFQLLDVPLMVRSEAMRSTGFFPLGLDQTYRIAGEDQWLVGTSEVPLVSY 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 YS EI++ P+R ++ FR+E GSAGRD G+ R HQF K E V I + S Sbjct: 240 YSGEIVDVTD-PIRLAAVSVCFRNEVGSAGRDVHGLYRVHQFAKVEQVIICEASLDASEQ 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + + AE++L+ L+L YR +++CTGD+ K D+E W+ + Y E S S Sbjct: 299 MFQEITRNAEDLLQLLELPYRKMAVCTGDMSQKTYKQVDIETWMPSRQAYGETHSSSQLL 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N RYR+ + K L++ +TLN + VA R LI +LE++ DGS+ IP LR YM Sbjct: 359 DFQARRSNIRYRNADGK-LQYCYTLNNTAVASPRILIPLLEHHQQEDGSIRIPEALRQYM 417 >gi|15616922|ref|NP_240135.1| seryl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681676|ref|YP_002468062.1| seryl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682231|ref|YP_002468615.1| seryl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471367|ref|ZP_05635366.1| seryl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11134954|sp|P57398|SYS_BUCAI RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783012|sp|B8D9A3|SYS_BUCA5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783013|sp|B8D7K5|SYS_BUCAT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|25293163|pir||E84966 serine-tRNA ligase (EC 6.1.1.11) [imported] - Buchnera sp. (strain APS) gi|10038986|dbj|BAB13021.1| seryl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621964|gb|ACL30120.1| seryl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624519|gb|ACL30674.1| seryl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086051|gb|ADP66133.1| seryl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086624|gb|ADP66705.1| seryl-tRNA synthetase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087207|gb|ADP67287.1| seryl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 427 Score = 342 bits (877), Expect = 7e-92, Method: Composition-based stats. Identities = 174/428 (40%), Positives = 256/428 (59%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+ +R L K+ + I S++EK + L + E+++ + N+ S + Sbjct: 1 MLNPYLLRNELHLTAKKLLKKGYKLNISKISSMEEKRKTLQIQTENLQFKHNALSNLFKE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N + + L+++ + L + E + + + CIPN+P ++VP G ++ Sbjct: 61 NKNIKNKNEL--LRHQVIQSSKDLNASKIELNSLKEKIHHFSMCIPNIPSDDVPEGNTSI 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N I+ G+K ++H E+G+ +D+ + ++SG+RF ++ G +A L RAL Q Sbjct: 119 NNKEIKYWGQKKKYDFEIQDHIELGKKFNELDWKSSAQMSGSRFVIMKGKIALLHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSL 236 FM+DLHT +HGY E P LV EA+YGTGQ+PKF+DD+F LIPT EV L Sbjct: 179 FMLDLHTLKHGYIESYVPYLVHSEALYGTGQLPKFSDDLFHINLTDKKKYILIPTGEVPL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL +II+ K LP+ T P FRSEA S GRDT+G++R HQF K ELV I + E S+ Sbjct: 239 TNLVYDQIIDEKDLPIMLTAHTPCFRSEASSYGRDTKGLIRLHQFDKVELVQIVKPEKSY 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E++ + AE++L+ L+L YR + LCTGD GF+A KTYDLEVW + YRE+SSCS Sbjct: 299 EALEKLTNHAEKVLQLLNLPYRKMLLCTGDTGFAAVKTYDLEVWFPSEKKYREVSSCSNM 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR-P 415 +FQ+RR+ +RYR + + F HTLNGSG+A+GR L AILENY +++G + IP VL+ Sbjct: 359 SDFQARRIKARYRKKSEQKNFFVHTLNGSGLAIGRTLAAILENYQHSNGRIEIPKVLQKK 418 Query: 416 YMNNLAVI 423 YM L I Sbjct: 419 YMQGLEFI 426 >gi|317178185|dbj|BAJ55974.1| seryl-tRNA synthetase [Helicobacter pylori F16] Length = 415 Score = 342 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 171/420 (40%), Positives = 260/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+I ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAIVHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|210135647|ref|YP_002302086.1| seryl-tRNA synthetase [Helicobacter pylori P12] gi|238065102|sp|B6JNX8|SYS_HELP2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|210133615|gb|ACJ08606.1| seryl-tRNA synthetase [Helicobacter pylori P12] Length = 415 Score = 342 bits (876), Expect = 9e-92, Method: Composition-based stats. Identities = 171/420 (40%), Positives = 262/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ E + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFEMVALSLKKRNHAMDDGLERLREVITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ + LK E + K +L L K E+ + +S IPN+ E+ P+G + Sbjct: 61 GIKMAQ--KADTSDLKKELESNKIKLNELSKSVSELEQQIDLKLSIIPNLVDEKTPLGAN 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRVFNFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IYLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EIL+ L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQECMLESASEILRALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|208435348|ref|YP_002267014.1| seryl-tRNA synthetase [Helicobacter pylori G27] gi|238065103|sp|B5Z999|SYS_HELPG RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|208433277|gb|ACI28148.1| seryl-tRNA synthetase [Helicobacter pylori G27] Length = 415 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 170/420 (40%), Positives = 261/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFDKVALSLKKRNHAMDDELERLCEVIVHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ + LK E K +L L K E+ + +S IPN+ E+ P+G + Sbjct: 61 GIKMAQ--KADTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAN 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRVFTFKPKEHFELAQQNGWIDFEGGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDIFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|317179657|dbj|BAJ57445.1| seryl-tRNA synthetase [Helicobacter pylori F30] Length = 415 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 172/420 (40%), Positives = 260/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELESLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPTSEV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTSEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|325971623|ref|YP_004247814.1| Seryl-tRNA synthetase [Spirochaeta sp. Buddy] gi|324026861|gb|ADY13620.1| Seryl-tRNA synthetase [Spirochaeta sp. Buddy] Length = 429 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 139/423 (32%), Positives = 230/423 (54%), Gaps = 10/423 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ ++ + + ++ R++ + I+ L E L+++ E++RA+RN N+ + Sbjct: 1 MIDLKELKARRDEIAQNIRVRNMHVDIDAIIELQESRSALMQEAENLRAKRNENAQ---K 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + L E LKE + +E++ V + + IPN + P+G Sbjct: 58 MKGKLDAETRTTLITEGKMLKESIASVEEQLSAVEQTFQSQARTIPNYAHPQAPVGKEDK 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG P +++H ++GE L L+DFD AT++SG +F L L+ AL + Sbjct: 118 DNTAIKFVGTVPQFSFKAKDHVQLGETLDLIDFDTATRVSGPKFYYLKREAVLLQMALER 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 + D+ G+T P + ++E + G G P+ + T G L+ T+E++L Sbjct: 178 YATDI-VIRRGFTPFITPDIAKEEILSGIGFNPRGEESNIYTLEGTGTCLVGTAEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ +I++ + LP++ L+ FR EAG AG+ ++G+ R HQF K E+ E S Sbjct: 237 YYADQILDREQLPIKMAGLSHCFRREAGGAGQYSKGLYRVHQFSKLEMFIYCLPEQSEAY 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ +LS EEI L L YRVV CTGDLG A + +D+E W+ G+ Y E++S S Sbjct: 297 HQELLSIEEEIFSGLGLAYRVVDTCTGDLGAPAYRKFDIEAWMPGRGEDGEYGEVTSTSN 356 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++Q+R ++ RYRD K +F H LNG+ +A+ R ++AILENY DGSV IP +L P Sbjct: 357 CTDYQARSLSIRYRDEEGK-TQFVHMLNGTAIALSRAMVAILENYQTEDGSVLIPQILVP 415 Query: 416 YMN 418 Y Sbjct: 416 YTG 418 >gi|289706991|ref|ZP_06503326.1| serine--tRNA ligase [Micrococcus luteus SK58] gi|289556316|gb|EFD49672.1| serine--tRNA ligase [Micrococcus luteus SK58] Length = 427 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 153/432 (35%), Positives = 235/432 (54%), Gaps = 15/432 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + + PE + + R + + ++ D R I E +RA + + ++ Sbjct: 1 MIDVKDLIEQPEKYRASQEARGEDASLVDRVVEADAARRSSIAGFEQLRAEQKAFGKRVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E AL E L ++ E + L +L PN+ ++ VP G Sbjct: 61 QAKGEEK----QALLAEVKDLAARVKEAESAAGAAEARLAELQRAFPNLIVDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L + + R+H E+GE LG +D +R K+SGARFS L G A LE A Sbjct: 117 DFVVLKEVGTPRDFAAEGFEPRDHLELGELLGAIDMERGAKVSGARFSFLKGVGARLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L Q +DL E+G+ V P LVR E M GTG + D+++ D +L+ TSEV+L Sbjct: 177 LMQLGLDLAL-ENGFVPVIPPTLVRPETMQGTGFDVEHDDEIYRLERDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 ++ EI++ S P+R+ + +R EAGSAG+DTRG++R HQF K E+ +ED+ Sbjct: 236 AGYHADEIMD-VSAPVRYAGWSTCYRREAGSAGKDTRGIIRVHQFNKLEMFIYAAQEDAE 294 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHER+L+ E +L +++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 295 AEHERLLAWEERMLGAIEVPYRVIDIAAGDLGLSAARKFDCEAWVPTQGTYRELTSTSNC 354 Query: 357 GNFQSRRMNS--RYRDPNSKS--LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 FQ+RR+N R R + + TLNG+ +A R ++AILEN+ NADGSVT+P Sbjct: 355 TTFQARRLNIRERVRTEDGSKGGTRMVATLNGT-LATTRWIVAILENHQNADGSVTVPAA 413 Query: 413 LRPYMNNLAVIK 424 LRPY+ + + Sbjct: 414 LRPYLGGMERFE 425 >gi|32266989|ref|NP_861021.1| seryl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] gi|46577203|sp|Q7VG34|SYS_HELHP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|32263041|gb|AAP78087.1| seryl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] Length = 422 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 178/427 (41%), Positives = 247/427 (57%), Gaps = 15/427 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + + + + L + + + + + K + +++E+++A +N S G Sbjct: 1 MIDTKALINQFDEIKSRLAIKKVSEETLSALKDMALKYKSCKQELEELQAFQNKTSKLFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + ALK K ++ LE E+ S L+ L IPN+P + P G Sbjct: 61 EYKREQK--DITALKVALDENKVKMSTLESTLKEIESHLETLAYGIPNLPDDATPEGEDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+ V P + +EH+E+G A G +DF+ KL+ +RFSVL G A L RAL Sbjct: 119 NDNVEIKKVLSPPHFDFVPKEHWELGIANGWIDFEAGVKLAKSRFSVLRGMGAKLNRALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIP 230 FM+D + + G+ + P++V A++GTGQ+PKF +DMF +LI Sbjct: 179 NFMLDYN-EKAGFESIVTPVIVNARALFGTGQLPKFEEDMFKVDSHFCDEQSEHDLYLIS 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 TSE++LTNLY II S+ LP+ T P FR EAGSAGRDTRGM+RQHQF K ELV+IT Sbjct: 238 TSEITLTNLYQDSIIPSEELPIMLTAQTPCFRKEAGSAGRDTRGMIRQHQFDKVELVAIT 297 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 S E+M+ A EIL L L +R++ LC GDLGFSA T D+EVWL GQN YREI Sbjct: 298 HPTQSAAMQEKMVQTASEILSELKLPHRLMQLCGGDLGFSASNTIDIEVWLPGQNCYREI 357 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SS S +FQ+RR RY+ + HTLNGS +AVGR LIAI+ENY DGSV IP Sbjct: 358 SSISNTRDFQARRAKIRYK--ENGKNALVHTLNGSSLAVGRTLIAIMENYQQVDGSVMIP 415 Query: 411 TVLRPYM 417 VL+ Y+ Sbjct: 416 EVLQKYL 422 >gi|218516937|ref|ZP_03513777.1| seryl-tRNA synthetase [Rhizobium etli 8C-3] Length = 347 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 230/345 (66%), Positives = 282/345 (81%) Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 K LP +E+E+ ++ + L +S IPN+P ++VP+G ++N++ R+VG+KP H +E Sbjct: 1 KTLLPAIEEEDRQLTAELNDALSRIPNIPFDDVPVGKDEHDNVVTRTVGEKPRWNHTPKE 60 Query: 141 HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 HFEIGEALG MDF+RA KLSG+RF+VLTG LA LERALGQFMIDLHT EHGYTEVS+PL+ Sbjct: 61 HFEIGEALGYMDFERAAKLSGSRFTVLTGPLARLERALGQFMIDLHTREHGYTEVSSPLM 120 Query: 201 VRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 VR EA++GTG +PKF +D+F TTD R+LIPT+EV+LTNL EI+E + LPLRFT L PS Sbjct: 121 VRAEALFGTGNLPKFEEDLFKTTDDRYLIPTAEVTLTNLVREEILEQEKLPLRFTALTPS 180 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 FRSEAGSAGRDTRGMLRQHQFWKCELVSIT + + EHERM +CAEE+LKRL LH+R + Sbjct: 181 FRSEAGSAGRDTRGMLRQHQFWKCELVSITDADSAIAEHERMTACAEEVLKRLGLHFRTM 240 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH 380 +LCTGD+GF + KTYDLEVWL GQN +REISSCS CG+FQ+RRMN+RYR + K+ +F H Sbjct: 241 TLCTGDMGFGSRKTYDLEVWLPGQNAFREISSCSVCGDFQARRMNARYRGKDDKTNRFVH 300 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 TLNGSG AVGRCLIA+LENYLN DGSVTIP VL PYM L I++ Sbjct: 301 TLNGSGTAVGRCLIAVLENYLNEDGSVTIPDVLLPYMGGLTKIER 345 >gi|313903688|ref|ZP_07837077.1| seryl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313465876|gb|EFR61401.1| seryl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 426 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 165/430 (38%), Positives = 243/430 (56%), Gaps = 10/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + +R+ PE + A + + +P+ + ++LD + R L+ +E +RA RN+ S +IG Sbjct: 1 MIDPELLRKEPERIREAARLKGFDPETVDLAVTLDRRRRELLAVVERLRAERNALSKRIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + LKE+L LE E +V + L+ L+ C+PN P P+G+S Sbjct: 61 SLP----PEERHAALTRATVLKERLAQLEPELRDVQNRLQHLLLCLPNPPAPSSPVGSSD 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ IR G+ PS R+H E+G LG+++ +RA KL+G+R L A LE A+ Sbjct: 117 EDNVEIRRWGQPPSFPFPPRDHLELGRLLGIIETERAVKLAGSRAYFLKNEGALLEWAVL 176 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 +F +DL GYT ++ P+LV DEAM TG P ++++ D L+ T+EV L Sbjct: 177 RFAVDLLL-RRGYTLLAPPVLVLDEAMTATGYFPLGREEVYRLERDELNLVGTAEVPLVA 235 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR--EEDSF 296 + E +E LP R+ L+P FR E GSAGRD G+ R HQF+K E V I + S Sbjct: 236 YHMDETLEENELPRRYCALSPCFRREVGSAGRDVHGLYRVHQFFKVEQVIICEADPDASR 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 HE +L AE+IL+ L+L YRVV CTGD+G +D+E W+ + Y E SCS+ Sbjct: 296 RYHEELLKNAEDILQALELPYRVVQACTGDMGQGQVLKHDVETWMPSRGRYGETHSCSSF 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RYRD N + +++ +TLN + VA R LI +LE + DGSV IP LRPY Sbjct: 356 HDFQARRARIRYRDRNGR-VRYAYTLNNTAVASPRILIPLLEIHQREDGSVRIPEALRPY 414 Query: 417 MNNLAVIKKE 426 M L + Sbjct: 415 MGGLEALVPR 424 >gi|317181163|dbj|BAJ58949.1| seryl-tRNA synthetase [Helicobacter pylori F32] Length = 415 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 172/420 (40%), Positives = 261/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELESLQAFQNRVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELYKSVGELEQQIDLRLSTIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFEIGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|54022104|ref|YP_116346.1| seryl-tRNA synthetase [Nocardia farcinica IFM 10152] gi|67461690|sp|Q5Z3K9|SYS_NOCFA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|54013612|dbj|BAD54982.1| putative seryl-tRNA synthase [Nocardia farcinica IFM 10152] Length = 420 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 149/427 (34%), Positives = 240/427 (56%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R +P + +L D R + +++RA + + S QIG Sbjct: 1 MIDLRLLREDPDAVRASQRARGEDPALVDALLEADAARRAAVATADNLRAEQKAMSKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A AL L ++ E +H + L + NV L VP Sbjct: 61 KAPK----EERSALLARAQELSVKVKEAEAAQHAADADLDAAHRALSNVVLPAVP-AGGE 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ +++ +VG P ++H E+GEALGLMD +R K+SG+RF LTGH A L+ L Sbjct: 116 DDYVVLETVGTPPEFDFEPKDHLELGEALGLMDMERGAKVSGSRFYFLTGHGALLQLGLL 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 + +G+T + P+LVR E M GTG + + A +++ D +L+ TSEV L Sbjct: 176 -QLAAQKAVANGFTMMIPPVLVRPEVMAGTGFLGRHAAEVYHLADDDMYLVGTSEVPLAG 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + P R+ + FR EAGS G+DTRG++R HQF K E+ T + + E Sbjct: 235 YHADEILDLSAGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVYTTPDQAEAE 294 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HER+L+ E+L +++ YR++ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 295 HERLLAWEREMLAAIEVPYRIIDVAAGDLGSSAARKFDCEAWVPSQQTYRELTSTSNCTT 354 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR++ RYRD N K + TLNG+ +A R ++AILEN+ ADGSV +P L P++ Sbjct: 355 FQARRLSVRYRDENGK-PQIAATLNGT-LATTRWIVAILENHQRADGSVRVPAALVPFV- 411 Query: 419 NLAVIKK 425 V++ Sbjct: 412 GTDVLRP 418 >gi|47458927|ref|YP_015789.1| seryl-tRNA synthetase [Mycoplasma mobile 163K] gi|67461764|sp|Q6KIJ8|SYS_MYCMO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|47458255|gb|AAT27578.1| seryl-tRNA synthetase [Mycoplasma mobile 163K] Length = 421 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 180/428 (42%), Positives = 269/428 (62%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDE---KNRILIKKIEDIRARRNSNSAQ 57 MLDI+ I +N + + LK+R I L + ++ + +++++RN S++ Sbjct: 1 MLDIKLILKNKDFVISKLKQR-SNFNVSEIEKLYTLGTERANILISLSELQSKRNEISSK 59 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+A +L +E +K++L ILE++ ++ + +++LIS IPN+PL++VP G Sbjct: 60 IGEAKRNKTDALF--FMDEVENIKKELSILEEKSTKIENKIQELISFIPNIPLDDVPFGK 117 Query: 118 SANENILIRSVGKK-PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 +N++++ K + + H+EIG L+DF R KLSG+RF V A L R Sbjct: 118 DDTDNVILKEFPKIGRGLVKAKKPHYEIGVEKDLIDFSRGAKLSGSRFIVYKNAGAKLIR 177 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL FM+D H ++GY+E+ P LV + MYGTGQ+PKF +D+F +LIPT+EV Sbjct: 178 ALESFMLDTH-EKNGYSEIMPPFLVNSKMMYGTGQLPKFKEDLFKIEGHDLYLIPTAEVP 236 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TNL+++EII+ + +F++ FRSEAGSAGRDT+G++R HQF K ELV E+ S Sbjct: 237 VTNLFNNEIIDLEK-NSKFSSFTNCFRSEAGSAGRDTKGIIRLHQFNKVELVEFASEQKS 295 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 +L A+ +L+ L++ YR V LCTGDLGFS+ KT DLE+WL + YRE+SS S Sbjct: 296 LRAFNSVLKNAKYLLELLEIPYREVLLCTGDLGFSSRKTIDLELWLPSEQRYREVSSVSY 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 G+FQSRR RYRD N K+ ++ HT+NGSG+A+ R L AILE Y N DGS+++P VL P Sbjct: 356 FGDFQSRRSMIRYRDEN-KNTQYVHTINGSGLAIDRVLAAILEQYQNDDGSISVPKVLIP 414 Query: 416 YMNNLAVI 423 Y+N + I Sbjct: 415 YLN-VEKI 421 >gi|15806294|ref|NP_295000.1| seryl-tRNA synthetase [Deinococcus radiodurans R1] gi|30173221|sp|Q9RUV5|SYS_DEIRA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|6459024|gb|AAF10848.1|AE001975_2 seryl-tRNA synthetase [Deinococcus radiodurans R1] Length = 425 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 153/426 (35%), Positives = 241/426 (56%), Gaps = 9/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+NP+ + A++ +++ + +L D L +++E ++ RN+N+ + + Sbjct: 1 MLDLKFIRENPDAVREAIRVKNVALDLDDLLQRDRDLVALKQRVEAMQTERNANAKLVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + L + L E L LE + E +LK+L+ +PN+PL VP+G + Sbjct: 61 A----SPEDRPGLIQKGKDLSEDLKALEPQLREQEDALKQLLLRVPNIPLPGVPVGKDED 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ P + EI E G DF+R ++SG+R +L G A LE A+ Sbjct: 117 DNVELRREGELPGFDFTPLDQVEILEKQGWADFERVARVSGSRSYLLKGDAALLEMAVLM 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 F +D S+ G+T +S LVR E + +G P + ++ D L T+EV + +L Sbjct: 177 FALDF-LSQRGFTPLSTTALVRRETLVNSGHFPGDEESVYKLEGDELLLAGTAEVPINSL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF--T 297 Y+ E + + LPL F + +FR EAGSAGRD RG++R H+F K E + R + Sbjct: 236 YAGEQLSADELPLTFAGFSAAFRREAGSAGRDVRGLIRVHEFRKVEQYVLCRADQEEGLK 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 ER+LS AE +L+ L+L YRV+ CTGD+G YD+E W+ + YRE SCS G Sbjct: 296 WFERLLSNAEGLLQALELPYRVIQNCTGDMGAGKVLMYDIETWVPSEQKYRETHSCSYLG 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR RYRD + K L + HTLN +G+A R L+ +LEN+ ADG+V +P LRPY+ Sbjct: 356 DWQARRTGLRYRDEHGKLL-YAHTLNNTGIASPRILVPLLENHQQADGTVRVPAALRPYL 414 Query: 418 NNLAVI 423 V+ Sbjct: 415 GGREVL 420 >gi|317014895|gb|ADU82331.1| seryl-tRNA synthetase [Helicobacter pylori Gambia94/24] Length = 415 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 171/420 (40%), Positives = 261/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ ++ + E + + + ++E ++A +N S + Sbjct: 1 MIDKRLLLQDFDKVALSLKKRNHAMDDELERLREAITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ + LK E K +L L K E + +S IPN+ E+ P+G + Sbjct: 61 GIKMAQKMDT--SDLKKELENNKIKLNELSKSVGEAEQEMDLKLSIIPNLVDEKTPLGAN 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQKNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IYLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIISVENLPIKMTGHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEYMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|257457271|ref|ZP_05622442.1| seryl-tRNA synthetase [Treponema vincentii ATCC 35580] gi|257445193|gb|EEV20265.1| seryl-tRNA synthetase [Treponema vincentii ATCC 35580] Length = 425 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 144/430 (33%), Positives = 237/430 (55%), Gaps = 10/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I+ N E + + R + +E + L ++ ++ ++ ++A+RN NS Sbjct: 1 MLDYRFIKNNLEAVKRNIINRAMHADAEAAVRLFDERTEMVTALQGLQAKRNENSL---A 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + AL +K ++ E E ++L + IPN+ + PIG Sbjct: 58 MKKAKDAAERTALIETGKAIKAEIAAAETALKEKEAALDAAMMQIPNMAHPDAPIGKEDK 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N ++ VG P ++H ++GE L L+DFD ATK++G +F L LE+AL Sbjct: 118 DNCEVKRVGTVPQFDFEPKDHVQLGEELDLIDFDAATKVAGVKFYYLKNEAVFLEQALVL 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR--WLIPTSEVSLTN 238 + +++ +HG+T P + ++E + G G P+ ++ T + L+ T+E++L Sbjct: 178 YGLNI-LRKHGFTPFITPDVAKEEILRGIGFNPRGSESNVYTIEDEGTCLVATAEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI+E LPL + L+ FR EAG+AG+ ++G+ R HQF K E+ E+S Sbjct: 237 YHSDEILEKAKLPLMYCGLSHCFRREAGAAGQFSKGLYRVHQFTKLEMFVYCTPEESDAI 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN--LYREISSCSTC 356 HE++ EEI L + +RVV CTGDLG A + +DLE W+ G+N + E++S S C Sbjct: 297 HEKLRLIEEEIFSGLGIAFRVVDTCTGDLGAPAYRKWDLEAWMPGRNGGEWGEVTSTSNC 356 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+RR+N R++D + K+ K+ H LNG+ +AV R L+AI+ENY DGS+ IP L PY Sbjct: 357 TDYQARRLNVRFKDDDGKN-KYVHMLNGTAIAVSRALVAIIENYQQKDGSIKIPEALVPY 415 Query: 417 MNNLAVIKKE 426 VIKK Sbjct: 416 C-GFDVIKKR 424 >gi|255534305|ref|YP_003094676.1| seryl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] gi|255340501|gb|ACU06614.1| Seryl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] Length = 422 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 137/419 (32%), Positives = 233/419 (55%), Gaps = 7/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + ++R+ E + L KR+ + + D++ + +++ + N S +I Sbjct: 1 MLQVNFLREERERVLEGLNKRNFRQISLVDEAIETDDERKKFQTELDQNLSEMNKISKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + EG + K++T+ KE + L+++ + + L +++ IPN+P +V GT+ Sbjct: 61 GILMKEGRKDEAETAKSKTAAFKENVQNLQQQLKDAEAKLLEILYQIPNIPNTKVVAGTA 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A +N ++ + H+E+ + L+DF+ K++GA F V G A L+R+L Sbjct: 121 AEDNEIVYQSHDVEGLGEGAIPHWELAKKYNLIDFELGVKVAGAGFPVYFGKGARLQRSL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLT 237 Q+ +D +T + GY EV+ P +V + + YGTGQ+P M+ + +LIPT+EV +T Sbjct: 181 VQYFLDKNT-DAGYLEVNPPHVVNEASGYGTGQLPDKEGQMYYAPEDKLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY ++E + LP++ T + +R EAGS G RG+ R HQF K E+V + + E+S+ Sbjct: 240 NLYRDVLLEERELPIKNTAFSQCYRREAGSYGAHVRGLNRLHQFEKVEIVRLEKPENSYA 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + +L L+L +R++ LC GD+GF++ TYD EVW A Q + E+SS S Sbjct: 300 ALDEMVEHVKTLLTELELPFRILRLCGGDMGFTSSMTYDFEVWSAAQEKWLEVSSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+ R+ R+R + HTLNGS +A+ R + A+LEN ADG + IP + Y Sbjct: 360 TFQANRLKCRFRT--DGKTQLVHTLNGSALALPRIMAALLENNQTADG-IKIPAKIAEY 415 >gi|315585867|gb|ADU40248.1| serine--tRNA ligase [Helicobacter pylori 35A] Length = 415 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 170/420 (40%), Positives = 259/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELESLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+I ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAIVHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|300120408|emb|CBK19962.2| unnamed protein product [Blastocystis hominis] Length = 449 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 127/436 (29%), Positives = 218/436 (50%), Gaps = 15/436 (3%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +DI +R P+ + + KR + + ++SLD + R + ++ + + S Sbjct: 3 IDINLLRAFKGGLPDLVKASQAKRFAKVALVDEVISLDNQWRKHVGDLDKLNRDKRVLSK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +IG +G + + S L +Q+ ++K V + I N+ + VP+ Sbjct: 63 EIGMKRKQGLNTDRET--TNVSLLSQQILDMQKSIENVRKMRDTKLGQIGNIVHDSVPVA 120 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++N+ + S G H E+ L + +R T+++G R L G L + Sbjct: 121 KDESQNVEVASWGSPRPMTKDMYCHHELLWMLDGYEPERGTRVAGHRGYFLKGSAVLLNQ 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTS 232 A+ + + +T + G+T + P + + M G Q+ F + ++ + ++LI TS Sbjct: 181 AIIMYAMQWNT-KRGFTLLQTPYFMNRDVMAGVAQLEDFDESLYHVEGEEGEEKYLIATS 239 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E + + E ++ K LPL++T + +FR EAG+ G+DT G+ R HQF K E I++ Sbjct: 240 EQPICGYHMGEWLDEKELPLKYTGFSTNFRKEAGAHGKDTWGIFRVHQFDKVEQFVISKP 299 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E+S+ HE M+ + E + L+L YRVV++ +G L +A K YDLE W G YRE+ S Sbjct: 300 EESWAMHEYMIQNSREFYESLNLPYRVVNIVSGALNNAAAKKYDLEGWFPGYEAYRELVS 359 Query: 353 CSTCGNFQSRRMNSRYRDPNSKS--LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 CS C ++QSR M R K+ K+ H LN + A+ R L ILENY ++G V IP Sbjct: 360 CSNCTDYQSRAMEIRCGATKKKNEEKKYVHMLNSTLCALTRTLCCILENYQTSEG-VEIP 418 Query: 411 TVLRPYMNNLAVIKKE 426 VL+P+M + + + Sbjct: 419 EVLQPWMGGIKFLPFK 434 >gi|224531827|ref|ZP_03672459.1| seryl-tRNA synthetase [Borrelia valaisiana VS116] gi|224511292|gb|EEF81698.1| seryl-tRNA synthetase [Borrelia valaisiana VS116] Length = 425 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 141/432 (32%), Positives = 233/432 (53%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + ++K R L + ++ LD+K + +I KI ++ A+RN NS + Sbjct: 1 MLDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKIITKIGELNAKRNENS---SK 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L +L LK+QL LE+E V +PN+ +VPIG Sbjct: 58 MQRNLDEGLRISLIETGKILKKQLIDLEEELKRVSIDFDLENRRVPNILSPDVPIGNIEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ I+ VG P+ ++H E+G L L+DFDRA ++SG +F L LE AL Sbjct: 118 DHFEIKKVGVIPNFDFKPKDHLELGRDLDLLDFDRAREVSGNKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ E G+ P + R+ + G G P+ + ++L+ TSE++L Sbjct: 178 FSLN-KLREKGFDVFITPDVAREFIVEGIGFNPRGNESNIYKIEGTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ +LP++ + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIID-LTLPIKMAGFSHCFRKEAGTYGQLSKGLYRVHQFSKVEMFCFCKAEESQVI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ L E+I L++ YRV+++C+ DLG A K YD+E W+ G+ Y E++S S Sbjct: 296 HDEFLGIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGSYGEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G V IP L Sbjct: 356 CTDYQSRRLKIRYKDQDGQN-KFAHMVNGTAIATTRVIISILENFQDEKGGVRIPKSLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYIPFKN 425 >gi|68171715|ref|ZP_00545070.1| Seryl-tRNA synthetase, class IIa [Ehrlichia chaffeensis str. Sapulpa] gi|67998859|gb|EAM85556.1| Seryl-tRNA synthetase, class IIa [Ehrlichia chaffeensis str. Sapulpa] Length = 406 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 211/409 (51%), Positives = 272/409 (66%), Gaps = 5/409 (1%) Query: 18 LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNET 77 ++ R+ E ++ I+ LD K R L+ ++ ++ RN + +I + + + Sbjct: 1 MQVRNSEKVAKKIIELDVKKRHLLTQLYSLQKERNQITQEIEKLKKNNLQCNIQ--IELS 58 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 + ++ + + S L L++ +PN+P E VPIG N N+ +R G K S Sbjct: 59 KDVTSKINDIN-NMIKEDSQLVNLLNMLPNIPDERVPIGKDENSNVELRRHGNKTSFDFP 117 Query: 138 SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 + H+E+GE L LMDF +A KLSG+RF +L LA L+RAL FM+D+H E GY+E+S Sbjct: 118 IKTHYELGENLNLMDFKQAAKLSGSRFVILKNQLAQLDRALSNFMLDIHIKEFGYSEISH 177 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTL 257 P+LV + AMYG GQ+PKFADD F TT+ LIPTSEV+LTNL S+ I + LPLRFT Sbjct: 178 PILVHESAMYGVGQLPKFADDSFKTTENFRLIPTSEVALTNLVSNMNINACDLPLRFTAC 237 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 +P FRSEAGSAGRDTRGM+RQHQF K ELVSI EE S E ERM AEEILKRL+L Y Sbjct: 238 SPCFRSEAGSAGRDTRGMMRQHQFNKVELVSIVTEEQSAPELERMTQIAEEILKRLELPY 297 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD--PNSKS 375 RV+ LCTGD+GFSA TYD+EVW+ QN YREISSCS C FQ+RRMN++Y N K Sbjct: 298 RVMMLCTGDMGFSASITYDIEVWIPSQNQYREISSCSNCKAFQARRMNTKYTTIINNVKV 357 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 KF HTLNGS +A+GR +IAILENY N DGS+TIP +LR YM+N VIK Sbjct: 358 SKFVHTLNGSALAIGRTIIAILENYQNRDGSITIPHILRKYMDNQEVIK 406 >gi|239916676|ref|YP_002956234.1| seryl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|281414867|ref|ZP_06246609.1| seryl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|259511676|sp|C5C878|SYS_MICLC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|239837883|gb|ACS29680.1| seryl-tRNA synthetase [Micrococcus luteus NCTC 2665] Length = 427 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 153/432 (35%), Positives = 235/432 (54%), Gaps = 15/432 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ + + PE + + R + + ++ D R I E +RA + + ++ Sbjct: 1 MIDVKDLIEQPEKYRASQEARGEDASLVDRVVEADAARRSSIAGFEQLRAEQKAFGKRVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E AL E L ++ E + L +L PN+ ++ VP G Sbjct: 61 QAKGEEK----QALLAEVKDLAARVKEAESAAGAAEARLAELQRAFPNLIVDGVPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L + + R+H E+GE LG +D +R K+SGARFS LTG A LE A Sbjct: 117 DFVVLKEVGTPRDFAAEGFEPRDHLELGELLGAIDMERGAKVSGARFSFLTGVGARLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L Q +DL E+G+ V P LVR E M GTG + D+++ D +L+ TSEV+L Sbjct: 177 LMQLGLDLAL-ENGFVPVIPPTLVRPETMQGTGFDVEHDDEIYRLERDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 ++ EI++ S P+R+ + +R EAGSAG+DTRG++R HQF K E+ +ED+ Sbjct: 236 AGFHAGEIMD-VSAPVRYAGWSTCYRREAGSAGKDTRGIIRVHQFNKLEMFIYAAQEDAE 294 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EH R+L+ E +L +++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 295 AEHARLLAWEERMLGAIEVPYRVIDIAAGDLGLSAARKFDCEAWVPTQGTYRELTSTSNC 354 Query: 357 GNFQSRRMNS--RYRDPNSKS--LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 FQ+RR+N R R + + TLNG+ +A R ++AILEN+ NADGSVT+P Sbjct: 355 TTFQARRLNIRERVRTEDGSKGGTRMVATLNGT-LATTRWIVAILENHQNADGSVTVPAA 413 Query: 413 LRPYMNNLAVIK 424 LRPY+ + + Sbjct: 414 LRPYLGGMERFE 425 >gi|255513782|gb|EET90047.1| seryl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 431 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 143/439 (32%), Positives = 239/439 (54%), Gaps = 23/439 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+ +++R++ + + +L+KR + + ++S+D + R +++ + RRN S I Sbjct: 1 MITTRYVREHIDEIKKSLEKRKSDYPIDELISIDAEWRAAKTELQALLTRRNKESLVISS 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG E +KE + LE + +L+ +PN+ E VP G + Sbjct: 61 MKKEGR--DASEKIEEIGRIKEDIEGLEAAIVTYEDRINRLLWNMPNILHESVPYGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ IR G I + E + E LG+++ +A ++SGARF L G + LE+AL + Sbjct: 119 ENVEIRKWGDTGKRISKTHEE--VLEKLGMLEMQKAAEVSGARFYYLMGDMVRLEQALIR 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD---------------DMFCTTDG 225 F ID S+ GYT VS P +++ E G + F + D Sbjct: 177 FAIDE-LSKKGYTVVSPPFMLKKEYYRGATALGDFEELLYKIADPNEAAGRKDYERIESE 235 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LI TSE ++ +++ ++ K LPL++ ++P FR EAG+ G+DT+G+ R HQF+K E Sbjct: 236 TFLISTSEHAIAAMHAGDLFSGKDLPLKYVGISPCFRREAGAHGKDTKGIFRVHQFYKVE 295 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +R ++S+ + +L +E I ++L + +RVV +CTGD+G A K D+E ++ Q Sbjct: 296 QFVFSRADESWGYFDELLGNSESIYRKLGIPHRVVDICTGDIGTVAAKKNDIEAYMPSQG 355 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YRE+ SCS C ++Q+ R++ +Y D + + + HTLN + +A R ++AI+ENYLN DG Sbjct: 356 RYREVVSCSNCTDWQAMRLDIKYDDKDGR--HYVHTLNSTAIATTRTMVAIIENYLNDDG 413 Query: 406 SVTIPTVLRPYMNNLAVIK 424 S+T+P L PYM VIK Sbjct: 414 SITVPKALVPYM-GKDVIK 431 >gi|288930586|ref|YP_003434646.1| seryl-tRNA synthetase [Ferroglobus placidus DSM 10642] gi|288892834|gb|ADC64371.1| seryl-tRNA synthetase [Ferroglobus placidus DSM 10642] Length = 450 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 144/448 (32%), Positives = 230/448 (51%), Gaps = 31/448 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R+NPE L + ++R + + + LD+ R + +++ +R RN S Sbjct: 5 LKALRENPEILVESQRRRGEDVEIVYKAIELDKNWRKKLYELDQLRRERNELS------- 57 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + + L + + E++ E+E ++ LK ++ IPN+ E VPIG N+N Sbjct: 58 RKLKSERSEELIKKAKEISERVKKEEEELKKLEEELKSVLLSIPNIVHESVPIGEDENDN 117 Query: 123 ILIRSVGKKPSAIHLSREHF--------------------EIGEALGLMDFDRATKLSGA 162 + IR GK + + E G D +RA K++G+ Sbjct: 118 VPIRFWGKPKVYREHVEQFLKQTNGEVEYEVIDKPVVGHADAVEIFGWADLERAAKVAGS 177 Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC- 221 RF L L L+ AL + ++ S+ G+ V+ P ++R EA G F + ++ Sbjct: 178 RFYYLLEDLVWLDFALMMYALEF-LSKQGFKIVNPPYMMRYEAYAGVTAFSDFEEVLYKL 236 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + +LI TSE L ++ +E + LPL + ++P FR EAG+ G+DT+G+ R HQF Sbjct: 237 EGEDLYLIATSEHPLAAMHMNETLGEDELPLLYAGVSPCFRKEAGAHGKDTKGIFRVHQF 296 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E E+S+ HE+++ AE++ + L + YR+V++CTGDLG A K YDLE W+ Sbjct: 297 NKVEQFVFCLPEESWEWHEKLIENAEKLWQGLGIPYRIVNICTGDLGVVAAKKYDLEAWM 356 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK-FTHTLNGSGVAVGRCLIAILENY 400 Q YRE+ SCS C ++QS R+N RY + K F HTLN + +A R + AI+ENY Sbjct: 357 PAQGKYREMVSCSNCTDWQSYRLNIRYAEKRGMPSKGFVHTLNSTAIATTRAITAIIENY 416 Query: 401 LNADGSVTIPTVLRPYMNNLAVIKKEHI 428 DG V IP VLR Y+ + KE+I Sbjct: 417 QLEDGRVEIPKVLRKYLEPIESAPKEYI 444 >gi|167044044|gb|ABZ08729.1| putative tRNA synthetase class II core domain (G, H, P, S and T) [uncultured marine crenarchaeote HF4000_APKG4H17] Length = 419 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 162/424 (38%), Positives = 250/424 (58%), Gaps = 6/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD++ IR+NPE++ LK R ++ + +L LD+K R +I +++R ++N S +I + Sbjct: 1 MLDMKMIRENPENIRKMLKDRDVQFDLDLLLELDKKRREMIISTDELRKKKNEMSVKISE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G S + E + ++L +E+ +HE KL IPNV E VP + Sbjct: 61 AKKTG--SEATPIIQEMQVVSKELAKMEEVQHETKLEYSKLALTIPNVLHESVP-RGDNS 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N IR G P ++H +I E+L L++ +RA K +GARF L L L ++L Q Sbjct: 118 ANKEIREWGTIPQFDFEVKDHIDISESLNLLELERAAKTAGARFYYLKDDLVKLNQSLIQ 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 F +D SE GYT P ++ +AM G + F D ++ +LI TSE ++ ++ Sbjct: 178 FGLDF-LSEKGYTLSQPPYMINRKAMEGAVILDDFEDVIYKIEDQDLYLIGTSEHAMVSM 236 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ EI++ SLP+R+ ++P FR EAG+ G+D +G+ R HQF K E ++ EDS+ EH Sbjct: 237 YADEILDGNSLPVRYAAISPCFRKEAGAHGKDQKGIFRVHQFEKIEQFVFSKPEDSWKEH 296 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E M+ EE ++L++ ++VV L + D+G + KTYDLEVW+AGQN YRE SCS C ++ Sbjct: 297 ENMIGVTEEFFQKLEIPHKVVLLSSSDMGKISAKTYDLEVWMAGQNAYREAVSCSNCLDY 356 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 QSRR+ R+RD ++ ++ HTLN + VA R ++AI+EN+ DG V IP VL+ YM Sbjct: 357 QSRRLKIRFRDKTNEDTQYAHTLNSTLVATERTMVAIIENFQTKDGHVNIPNVLQKYM-G 415 Query: 420 LAVI 423 +I Sbjct: 416 KKII 419 >gi|317502764|ref|ZP_07960873.1| serine--tRNA ligase [Prevotella salivae DSM 15606] gi|315666120|gb|EFV05678.1| serine--tRNA ligase [Prevotella salivae DSM 15606] Length = 430 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 141/423 (33%), Positives = 230/423 (54%), Gaps = 7/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H E E +L D+ R +K++ + ++N + Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFEGAREAVEKVLEYDKIRREAQQKLDSNKQQQNQLAKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + +K + LK L++ + + + ++ IPN+P ++VP G Sbjct: 61 IGSLMKEGKKEEAENIKTTVADLKAADKALQEIMDKAQADMTHVLLDIPNIPNKDVPEGK 120 Query: 118 SANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 A+ N++I+ P + H+++ + L+DFD K++GA F V G +A +R Sbjct: 121 DASSNVVIKEDLTNMPHLGDEALCHWDLLKKYNLVDFDLGVKITGAGFPVYIGKMARFQR 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL F +D + GY E+ P +V + + GTGQ+P M+ D +LIPT+EV Sbjct: 181 ALEAFFLDE-ARKSGYLEIQPPYVVNEASGLGTGQLPDKEGQMYHANLDNLFLIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TN++ EI++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I E S Sbjct: 240 VTNIFRDEILDEKDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPEHS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + ML E +LK+L+L Y ++ LC GD+ F++ D E + A Q+ + E+SS S Sbjct: 300 YQSWHEMLDHVEGLLKKLELPYHLLLLCGGDMSFTSSICVDFETYSAAQHRWLEVSSVSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+ R++ RYR K ++ HTLNGS +A+ R + ILEN G + +P VL P Sbjct: 360 FESYQANRLHCRYRHSEDKKIELCHTLNGSALALPRIVATILENNQTPQG-IRVPKVLVP 418 Query: 416 YMN 418 Y Sbjct: 419 YCG 421 >gi|183985354|ref|YP_001853645.1| seryl-tRNA synthetase SerS [Mycobacterium marinum M] gi|238690931|sp|B2HMM1|SYS_MYCMM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|183178680|gb|ACC43790.1| seryl-tRNA synthetase SerS [Mycobacterium marinum M] Length = 419 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 149/429 (34%), Positives = 238/429 (55%), Gaps = 12/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + R +P + +L+ D R I + +RA + + S +G Sbjct: 1 MIDLKLLREDPDVVRRSQLSRGEDPALVDALLTADTARRTAISTADSLRAEQKAASKGVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E + L L EQ+ E + E ++ IPNV L+ VP G Sbjct: 61 GASPEERPA----LLQRAKDLAEQVKAAEATQSETEAAFTAAHMAIPNVILDGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L V +P AI ++H E+GE+LGL+D R K++G+RF LTG A L+ L Sbjct: 117 DYAVLE--VVGEPRAIDNPKDHLELGESLGLIDMARGAKVAGSRFYFLTGQGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q + L ++G+ + P+LVR E M GTG + AD+++ D +L+ TSEV + Sbjct: 175 QLALRLAV-DNGFIPMIPPVLVRPEVMAGTGFLGAHADEVYRLEADDLYLVGTSEVPMAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ PLR+ + FR EAGS G+DTRG++R HQF K E D+ E Sbjct: 234 YHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCTPADAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L+ E+L ++++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HQRLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEAWVPTQGTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD N K + TLNG+ + R L++ILEN+ DGSV +P L ++ Sbjct: 354 FQARRLATRYRDANGK-PQIAATLNGT-LGTTRWLVSILENHQQPDGSVRVPAALVGFV- 410 Query: 419 NLAVIKKEH 427 V++ + Sbjct: 411 GTEVLEPKG 419 >gi|253574032|ref|ZP_04851374.1| seryl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846509|gb|EES74515.1| seryl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 430 Score = 340 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 158/428 (36%), Positives = 234/428 (54%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR++ + + +++ +E +L D++ R L+++ E +R RN + QI Sbjct: 1 MLDIKWIREHQKQVQTVAEEKGIELSVPELLRWDDQRRALLQETERLRQERNRLTPQIEA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 I E ALK+E L +L LEKE E ++L+ +PN + P G S Sbjct: 61 LIREQEPEAAAALKDEVKQLNRRLNGLEKELEEAEHEYRRLMLLVPNRVSPDTPKGRSDL 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ ++ VG P+ R+H +GE ++D R K +GAR L+G L RA+ Q Sbjct: 121 DNVEVKRVGAPPTFEFTPRDHVALGELHRMIDIPRGVKTAGARNYYLSGAGVLLHRAVQQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 +DL G+T + PL+VR EA+ TG P AD + D RWL+ T+EV L + Sbjct: 181 LAMDL-LGAKGFTLLEVPLMVRSEALVNTGFFPLGADQTYRMAEDDRWLVGTAEVPLVSY 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 Y EI+E P++ + FRSE GSAGRD G+ R HQF K E V + + S Sbjct: 240 YDREIVELTQ-PIKLAAASLCFRSEVGSAGRDVHGLYRVHQFSKVEQVVLCENNLDLSEQ 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + + AEE+L+ L+L YRV+++CTGD+ K YD+E W+ + Y E S S Sbjct: 299 LFQEITQNAEEMLQLLELPYRVMAVCTGDMSQKTYKQYDIETWMPSRGAYGETHSSSQLL 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N R++D N K L++ +TLN + VA R LI +LEN+ DGS+ IP LR YM Sbjct: 359 DFQARRSNIRFKDRNGK-LQYCYTLNNTMVASPRILIPLLENHQEEDGSIRIPLALRKYM 417 Query: 418 NNLAVIKK 425 N L + Sbjct: 418 NGLERLTP 425 >gi|315452620|ref|YP_004072890.1| seryl-tRNA synthetase [Helicobacter felis ATCC 49179] gi|315131672|emb|CBY82300.1| seryl-tRNA synthetase [Helicobacter felis ATCC 49179] Length = 419 Score = 340 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 169/421 (40%), Positives = 250/421 (59%), Gaps = 10/421 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDE---KNRILIKKIEDIRARRNSNSAQ 57 M+D + + ++ E + L+KR ++PQ +L+L E + + ++E+ +A +N S Sbjct: 1 MIDKKLLLKDFEGVVENLQKRFVDPQV--LLNLKEVLLEFKAQKLQLEESQAFQNKISKD 58 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 QA + + D LK K ++ L+ + + + L L++ +PN+ P G Sbjct: 59 FFQAQRQNDPQARD-LKTSLEENKTKIAHLQAQVNTLEEKLDTLLAGLPNLLDPATPFGK 117 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++N+ I+ + S +EH + + G ++F+RA K+S +RF+VL A + RA Sbjct: 118 DESDNVEIKRILTPKSFDFEPQEHHILAQKNGWIEFERAVKISKSRFNVLRARGALVHRA 177 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSL 236 L FM+D + G+ VS P++V ++GTGQ+PKF +D+F D +LIPTSEVSL Sbjct: 178 LANFMLDSNA-SRGFEIVSPPVIVNTTTLFGTGQLPKFQEDLFKIEDESLYLIPTSEVSL 236 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY+ EI+ + LP+ T P FR EAGSA +DT GM+RQHQF K ELV+IT ++S Sbjct: 237 TNLYADEILRVEDLPIMMTACTPCFRKEAGSASKDTHGMIRQHQFDKVELVAITHPDESA 296 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E+ML A IL L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 297 HMQEKMLEAASAILCALELPHRFVQLCSGDLGFSASNTVDIEVWLPGQNCYREISSVSNT 356 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR RY+ K HTLNGS +A+GR L+A++EN+ DG + IP L PY Sbjct: 357 RDFQARRAKIRYK--EGKKNALAHTLNGSSLAIGRTLVALMENHQTRDGDIHIPKALEPY 414 Query: 417 M 417 + Sbjct: 415 L 415 >gi|255546678|ref|XP_002514398.1| seryl-tRNA synthetase, putative [Ricinus communis] gi|223546495|gb|EEF47994.1| seryl-tRNA synthetase, putative [Ricinus communis] Length = 447 Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats. Identities = 133/439 (30%), Positives = 218/439 (49%), Gaps = 17/439 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ NP+ + + ++R I+ LD++ R +++++R N + Sbjct: 1 MLDINLFREDKGHNPQLIRESQRRRFANVNVVGEIILLDKEWRQRQYELDNLRKDFNKIN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + + G + +T+ K E + E +L K + + N+ + VP+ Sbjct: 61 KLVAKLKIAG--EDATEMIKDTNENKRLTAEKEAQVQEAALALNKKLEEVGNLVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N +IR G+K L + H ++ E LG+ D + ++G R L G L Sbjct: 119 SNDEANNAVIRVWGEKRLEPKL-KNHVDLVELLGIADTKKGANVAGGRGFYLKGDGVRLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +AL +D + GYT + P +R + M Q+ +F ++++ T + ++LI T+ Sbjct: 178 QALINVALDF-LEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGEDKYLIATA 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+R+ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 237 EQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSP 296 Query: 293 E--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 DS+ HE M+ +E+ K L++ Y+VV++ +G L +A K YDLE W N YRE+ Sbjct: 297 NGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASNTYREL 356 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C ++QSR++ RY + N ++ ++ H LN + A R L ILENY +G V Sbjct: 357 VSCSNCTDYQSRKLEIRYGQKKNNEQAKQYVHLLNSTLTATERTLCCILENYQKENG-VE 415 Query: 409 IPTVLRPYMNNLAVIKKEH 427 IP LR YM + + ++ Sbjct: 416 IPEPLRGYMGGKSFLPFQN 434 >gi|297380665|gb|ADI35552.1| seryl-tRNA synthetase [Helicobacter pylori v225d] Length = 415 Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats. Identities = 171/420 (40%), Positives = 259/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ E + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFEMVALSLKKRNNAMDDALERLREVITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|148643770|ref|YP_001274283.1| seryl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061] gi|222444800|ref|ZP_03607315.1| hypothetical protein METSMIALI_00413 [Methanobrevibacter smithii DSM 2375] gi|261350627|ref|ZP_05976044.1| serine--tRNA ligase [Methanobrevibacter smithii DSM 2374] gi|148552787|gb|ABQ87915.1| seryl-tRNA synthetase, SerS [Methanobrevibacter smithii ATCC 35061] gi|222434365|gb|EEE41530.1| hypothetical protein METSMIALI_00413 [Methanobrevibacter smithii DSM 2375] gi|288861410|gb|EFC93708.1| serine--tRNA ligase [Methanobrevibacter smithii DSM 2374] Length = 425 Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats. Identities = 138/425 (32%), Positives = 221/425 (52%), Gaps = 6/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ R+NPE + + KKR + +E ++ D R K++ +R+ +N S Sbjct: 1 MLDIKLFRENPELIFDSEKKRFRGTETAEKVIEYDTLWREGEKRLNFLRSEKNRLSKSFK 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A EGNL V ++ + ++ L + E + N+ E+VPI + Sbjct: 61 KAKQEGNLEEV---IAQSKEVANEIKELGPKIEEYKKLRDDYRYKVGNIIDEDVPISDTE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N +++ G+ P H ++ E + D A +++GARF L + HL AL Sbjct: 118 DDNKIVKEYGEIPEFDFEPLNHVDLIEKIDGADMKTAAQIAGARFYYLKRDILHLNLALI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 QF ++ GY + P V+ E T ++ +F + ++ + +LI T+E +L Sbjct: 178 QFALNE-LESKGYIPLQTPFFVKGEVAAETSELGEFEETLYKVADEDLYLIATAEQTLAA 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ EII + LP+++ L+ FR EAGS G+DT G+ R HQF K E T E+S Sbjct: 237 LHRDEIIAPEDLPIQYCALSTCFRKEAGSHGKDTLGIFRVHQFEKIEQFIYTTPEESKNA 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+++L EEI ++L LHY VV++ + L +A YDLE W G YRE+ SC+ C + Sbjct: 297 HKKLLEVTEEIYQKLGLHYHVVAIVSSALNDNAAVKYDLEAWFPGSKAYRELVSCTNCKD 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+R+ +R+ S + HTLN + +A R + +LENY DGSV +P VL PYM Sbjct: 357 YQARKTKTRFGKAGSGDAQTLHTLNSTAIATERTICCLLENYQQEDGSVKVPDVLVPYMG 416 Query: 419 NLAVI 423 VI Sbjct: 417 GKTVI 421 >gi|217033888|ref|ZP_03439312.1| hypothetical protein HP9810_870g20 [Helicobacter pylori 98-10] gi|216943651|gb|EEC23096.1| hypothetical protein HP9810_870g20 [Helicobacter pylori 98-10] Length = 415 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 169/420 (40%), Positives = 260/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFEMVALSLKKRNNAMDDELERLHEVITHYKKQLIELESLQAFQNRVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFS++ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSIIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R + LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFMQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|308064240|gb|ADO06127.1| seryl-tRNA synthetase [Helicobacter pylori Sat464] Length = 415 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 170/420 (40%), Positives = 259/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLRLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+I ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAIVHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|224024370|ref|ZP_03642736.1| hypothetical protein BACCOPRO_01094 [Bacteroides coprophilus DSM 18228] gi|224017592|gb|EEF75604.1| hypothetical protein BACCOPRO_01094 [Bacteroides coprophilus DSM 18228] Length = 425 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 151/422 (35%), Positives = 229/422 (54%), Gaps = 6/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I ++ + + L+K+ + + +L L+EK R +++ A NS S Sbjct: 1 MLTIKQITEDTDKVIRGLEKKHFANAKETIAQVLELNEKRRNAQNQLDKNLAEVNSTSKV 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG +A K + +KE L+ + ++ L+ IPNVP EEVP G Sbjct: 61 IGALMKEGKKEEAEAAKARVAEIKEASKSLQTAMDQAAEDMQNLLYTIPNVPYEEVPEGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 TAEDNVVEKMGGMETELPKNALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D GY E+ P +V + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LINFFLDE-AHAAGYEEIMPPTVVNAASGYGTGQLPDKEGQMYHCNLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKIELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +LK+L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLKKLELPYRILRLCGGDMSFTAAICFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR + K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRKESDKKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 418 Query: 417 MN 418 Sbjct: 419 CG 420 >gi|261838754|gb|ACX98520.1| seryl-tRNA synthetase [Helicobacter pylori 51] Length = 415 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 172/420 (40%), Positives = 261/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+GTS Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGTS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEYMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|297852062|ref|XP_002893912.1| hypothetical protein ARALYDRAFT_314052 [Arabidopsis lyrata subsp. lyrata] gi|297339754|gb|EFH70171.1| hypothetical protein ARALYDRAFT_314052 [Arabidopsis lyrata subsp. lyrata] Length = 441 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 130/437 (29%), Positives = 211/437 (48%), Gaps = 15/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI R+NPE + +++ + E I+ LD+ R + + R N + ++ Sbjct: 1 MCDIDLFRKNPEIIRETQRRKFASVEVVEEIIILDQVWRQRKYEYDCARKDFNKTNKEVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + +K++ E E E +SL+ + + N+ + VPI Sbjct: 61 KLKIS--DADATEKIQQAEIIKQECTKYEAEVREAYASLEAKLWTMGNLIHDSVPISNDE 118 Query: 120 NEN--ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 N + + + S H ++ E L ++D R K++G R L G+ L +A Sbjct: 119 ANNLLVKVSGEPRVASPGQELTNHMDLVEFLDIVDTKRGAKVAGGRGYFLKGYGVLLNQA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------TDGRWLIPT 231 L + + + ++ + L+ E+M Q+ +F ++++ D ++LI T Sbjct: 179 LINYSLAF-LQKKEFSVIQPNCLMTKESMAKCAQLSQFDEELYKVTGEGKGNDEKFLIAT 237 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +E L + E LP+R+ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 238 AEQPLCAQHQGEWFHPTELPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITG 297 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 +DS+ E ML +EE + L + YRVVS+ +G L +A K YDLE W YRE+ Sbjct: 298 PDDSWEMLEEMLKNSEEFYQSLKIPYRVVSVVSGALNDAAAKKYDLEGWFPASGTYRELV 357 Query: 352 SCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 SCS C ++QSRR+N R Y+ N ++ K+ H LN + A R + ILENY DG V I Sbjct: 358 SCSNCTDYQSRRLNIRYGYKKSNQETRKYVHMLNSTLCATQRTICCILENYQRDDG-VDI 416 Query: 410 PTVLRPYMNNLAVIKKE 426 P VL+P+M + + + Sbjct: 417 PEVLQPFMAGVKFLPFK 433 >gi|284161908|ref|YP_003400531.1| seryl-tRNA synthetase [Archaeoglobus profundus DSM 5631] gi|284011905|gb|ADB57858.1| seryl-tRNA synthetase [Archaeoglobus profundus DSM 5631] Length = 454 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 143/449 (31%), Positives = 230/449 (51%), Gaps = 32/449 (7%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R NPE L + K+R + + LD+ R L+K+++++R RN S +I +A Sbjct: 9 LKALRDNPEILIESQKRRGENVEIVYKAIELDKLYRKLMKELDELRHDRNRISQEIRKAK 68 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 ++ L + + + + E E +V LK ++ IPN+ E VPIG S +N Sbjct: 69 SQ-------ELIAKAREISQLIKEKENELKKVEKELKDILLSIPNIIHESVPIGESDEDN 121 Query: 123 ILIRSVGKKPSA---------------------IHLSREHFEIGEALGLMDFDRATKLSG 161 + IR GK H + E G +D +A K++G Sbjct: 122 VPIRFWGKCKVYREHLDAFLKQTEGFNVDYEVIDKPVIGHADYVEKFGFVDTLKAGKVAG 181 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 +RF + L L+ AL + +D + G+ V P ++ +A G + F + ++ Sbjct: 182 SRFYYMFDDLVWLDFALMMYALDFLAKQ-GFRVVMPPYMLNRKAYQGVTALSDFEEMLYK 240 Query: 222 T-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 + +LI TSE L +++ +E++ LPL + ++P FR EAG+ G+DT+G+ R H Sbjct: 241 IEDEDLYLIATSEHPLASMHMNEVLAEDELPLLYAGVSPCFRKEAGAHGKDTKGIFRVHI 300 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E E S+ HE+++ AE++ + L + YRVV++C+GDLG A K YDLE W Sbjct: 301 FNKVEQFVYCLPEQSWDWHEKLIENAEKLWQGLGIPYRVVNVCSGDLGIVASKKYDLEAW 360 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK-FTHTLNGSGVAVGRCLIAILEN 399 + Q +RE+ SCS C ++QS R+N RY + K F HTLN + +A R + AI+EN Sbjct: 361 MPAQGKFREMVSCSNCTDWQSFRLNIRYAEKKGAPSKGFVHTLNSTAIATTRAITAIIEN 420 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 + DG V IP VLR Y+ + KE I Sbjct: 421 FQLEDGRVEIPKVLRKYLEPIESAPKEFI 449 >gi|188528251|ref|YP_001910938.1| seryl-tRNA synthetase [Helicobacter pylori Shi470] gi|308183583|ref|YP_003927710.1| seryl-tRNA synthetase [Helicobacter pylori PeCan4] gi|238691956|sp|B2UVM6|SYS_HELPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|188144491|gb|ACD48908.1| seryl-tRNA synthetase [Helicobacter pylori Shi470] gi|308065768|gb|ADO07660.1| seryl-tRNA synthetase [Helicobacter pylori PeCan4] Length = 415 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 171/420 (40%), Positives = 259/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ E + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFEMVALSLKKRNNAMDDALERLREVITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLRLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|118575306|ref|YP_875049.1| seryl-tRNA synthetase [Cenarchaeum symbiosum A] gi|166228637|sp|A0RTS8|SYS_CENSY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|118193827|gb|ABK76745.1| seryl-tRNA synthetase [Cenarchaeum symbiosum A] Length = 418 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 155/424 (36%), Positives = 230/424 (54%), Gaps = 7/424 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L+ R+++ + +L DE+ R ++ +D+R RN Q+ Q Sbjct: 1 MLDPHILRSRPKDVSDMLQARNVDFDLDALLDADERRRYFMQLADDMRQERNFAGRQVAQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G + E L E+L E E+ S +L IPN+ + VP G Sbjct: 61 FKRDGVDTTAA--IKEMKDLSEKLYQAEGEQQSAESEYLELAWTIPNMIDKSVPRGPDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+++R P+ + + H E+ GL+D RA K+SGARF L G L L +AL Sbjct: 119 ANVVLRKWVGTPTPS-VPKGHEELAVGRGLLDMKRAAKVSGARFYYLKGSLVRLNQALIS 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 +D GYT V P L+R AM G F D ++ D +LI TSE ++ + Sbjct: 178 HSLDF-LGSRGYTLVQPPYLIRRNAMEGAIIAEDFEDVIYKIEDDDLYLIGTSEHAMAAM 236 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EII LPLR+ ++P FR EAG+ G+D +G+ R HQF K E ++ EDS+ EH Sbjct: 237 HSDEII-EGGLPLRYAGVSPCFRKEAGAHGKDQKGIFRVHQFDKIEQFVFSKPEDSWREH 295 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +RML EE + L + YRVV L +GD+G + KTYD+E W+A Q+ YRE+ SCS C +F Sbjct: 296 DRMLEITEEFYQGLGIPYRVVLLSSGDMGKVSAKTYDIECWMAAQDAYREVVSCSNCLDF 355 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 QSRR+ R+RD + ++ HTLN + A R L I+EN+ ADG++ +P L+ Y+ Sbjct: 356 QSRRLKVRFRDRTDEDTQYVHTLNSTLAATSRLLACIIENFQEADGTIRVPQPLQKYV-G 414 Query: 420 LAVI 423 I Sbjct: 415 KEAI 418 >gi|317182685|dbj|BAJ60469.1| seryl-tRNA synthetase [Helicobacter pylori F57] Length = 415 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 171/420 (40%), Positives = 261/420 (62%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELESLQAFQNRVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ + LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQKVDTG--DLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|319936694|ref|ZP_08011107.1| serine-tRNA ligase [Coprobacillus sp. 29_1] gi|319808251|gb|EFW04816.1| serine-tRNA ligase [Coprobacillus sp. 29_1] Length = 425 Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats. Identities = 135/427 (31%), Positives = 219/427 (51%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI +R+NPE + +KK+ + LD+ R + K ++RA RN S + Sbjct: 1 MIDIAKLRENPELVKENMKKKFQHDRLHLVDEAFDLDKVYRETLTKASELRAMRNKLSKE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG L + K + + + + L LE++E E+ LK+++ IPN + VP+G Sbjct: 61 IGQFMREGKKDLAEQNKEKVNEMAKLLKELEEKEIELGPKLKEIMMKIPNFIDDSVPVGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I+ G+ + H +I +D D + + SG F L G +A L A Sbjct: 121 DDSENVEIQKYGEPIVPAYEIPYHADIITKFNGLDKDASGRTSGNGFYYLMGDIARLSSA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T P ++R + + G + M+ + +LI TSE S+ Sbjct: 181 MISYARDFMI-DKGFTYCIPPFMIRSDVVTGVMSFEEMDAMMYKIEGEDLYLIGTSEHSM 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + +I++ LP+ T+ +P FR E G+ G + RG+ R HQF K E+V + + ED+ Sbjct: 240 IGKFKDQIVKEDDLPITMTSYSPCFRKEVGAHGIEERGIYRVHQFEKQEMVVLCKPEDAM 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 +++M S E+ + LD+ R + C+GDL K+ D+E W Q Y E+ SCST Sbjct: 300 EWYDKMWSYTVELFRSLDIPVRTLECCSGDLADLKEKSCDVEAWSPRQQKYFEVGSCSTL 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ Q+RR+ R + + TLN + +A R LIA +EN N DG++ IP LRPY Sbjct: 360 GDAQARRLGIRTKGQEG--TYYVATLNNTVLASTRALIAFIENNYNEDGTIDIPKALRPY 417 Query: 417 MNNLAVI 423 M I Sbjct: 418 MGGKDKI 424 >gi|224081391|ref|XP_002306393.1| predicted protein [Populus trichocarpa] gi|222855842|gb|EEE93389.1| predicted protein [Populus trichocarpa] Length = 447 Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats. Identities = 136/439 (30%), Positives = 220/439 (50%), Gaps = 17/439 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ NPE + + ++R+ + + I+ D + R +++ +R N + Sbjct: 1 MLDINLFREEKGNNPEKIRESQRRRYANTEIVDEIIQFDNEWRQRQFELDSLRREFNKQN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 ++ Q ET K+ + EKE E +L + I N+ + VP+ Sbjct: 61 KKVAQLKIA--KEDATEAIRETEETKKLIADKEKEVQEAKDALYSRLPTIGNLVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 + + N +IR+ G+K R H ++ E LG+ D + ++G R L G L Sbjct: 119 NDNEDFNAVIRAWGEKRV-EKKLRNHVDLVELLGIADLKKGADVAGGRGFYLKGDGVRLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +AL F ++ + GYT + P +R + M Q+ +F ++++ T D ++LI T+ Sbjct: 178 QALINFGLEF-LEKRGYTALQTPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATA 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+R+ + FR EAG+ GRDT G+ R HQF K E IT Sbjct: 237 EQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKEAGAHGRDTLGIFRVHQFEKVEQFCITSP 296 Query: 293 E--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 DS+ HE M+ +EE + L++ Y+VV++ +G L +A K YDLE W N YRE+ Sbjct: 297 NGNDSWEMHEEMIKNSEEFYQELNIPYQVVAIVSGALNDAAAKKYDLEGWFPASNTYREL 356 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C ++QSRR+ RY + N + ++ H LN + A R + ILENY DG V Sbjct: 357 VSCSNCTDYQSRRLEIRYGQKKSNEQVKQYCHLLNSTLTATERTICCILENYQKEDG-VE 415 Query: 409 IPTVLRPYMNNLAVIKKEH 427 +P LR YM+ + ++ Sbjct: 416 VPEPLRKYMSGKEFLPFQN 434 >gi|145221742|ref|YP_001132420.1| seryl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|145214228|gb|ABP43632.1| seryl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] Length = 445 Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 238/427 (55%), Gaps = 12/427 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D + +R+NP+ + + + R +P + + D R I +++RA + S S IG+ Sbjct: 28 IDPKVLRENPDAVRASQQARGEDPSLVDALAEADSARRAAISAADNLRAEQKSASKAIGK 87 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L L E++ E ++ ++ I NV ++ VP G + Sbjct: 88 ASPDERPA----LLAAAKELSEKVKAAEADQAAAEAAYTAAHMAISNVIIDGVPAGGEDD 143 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +L +P I +++H E+GEALGL+D +R K+SG+RF LTG A L+ L Q Sbjct: 144 FVVLDT--VGEPRVIPDAKDHLELGEALGLIDMERGAKVSGSRFYFLTGFGALLQLGLFQ 201 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 + T E+G+T + P+LVR E M GTG + AD+++ D +L+ TSEV L Sbjct: 202 LAVRTAT-ENGFTLMIPPVLVRPEIMRGTGFLGAHADEIYHLAEDDLYLVGTSEVPLAGY 260 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EI++ PLR+ + FR EAGS G+DTRG++R HQF K E R E++ EH Sbjct: 261 HSDEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEEAEAEH 320 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +R+L ++L +++ YRV+ + GDLG SA + YD E W+ Q YRE++S S C F Sbjct: 321 DRLLGWQRQLLAAIEVPYRVIDIAAGDLGSSAARKYDCEAWVPTQQTYRELTSTSNCTTF 380 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+ RYRD N + + TLNG+ +A R L+AILEN+ DGSV IP L P++ Sbjct: 381 QARRLAVRYRDENGR-PQTAATLNGT-LATTRWLVAILENHQQPDGSVRIPEALVPHV-G 437 Query: 420 LAVIKKE 426 V++ + Sbjct: 438 TNVLRPK 444 >gi|19115779|ref|NP_594867.1| cytoplasmic serine-tRNA ligase Srs1 (predicted) [Schizosaccharomyces pombe 972h-] gi|3183173|sp|O14018|SYSC_SCHPO RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|2440188|emb|CAB10149.1| cytoplasmic serine-tRNA ligase Srs1 (predicted) [Schizosaccharomyces pombe] Length = 450 Score = 339 bits (868), Expect = 7e-91, Method: Composition-based stats. Identities = 129/438 (29%), Positives = 209/438 (47%), Gaps = 18/438 (4%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + NPE + + +KR + + ++ + ++ L ++++ N Sbjct: 1 MLDINLFQVEKGGNPEIIRESQRKRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + L E ++L E+ L ++E + ++S I N+ + VP+ Sbjct: 61 KEIGLKMKA--KEDASELLEEKNSLTERKKNLIEQETAKNKEMLNVVSSIGNIVHDSVPV 118 Query: 116 GTSANENILIRSVGKK--PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + N +IR + H E+ L D +R K+SG R L + Sbjct: 119 SMDEDNNEIIRKWAPEGVTVEKKNCLSHHEVLTRLDGYDPERGVKVSGHRGYFLRQYGVF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIP 230 AL Q+ +D + GY + AP ++ + M T Q+ +F ++++ D R+LI Sbjct: 179 FNLALIQYGLDF-LEKRGYIALQAPTMLNKDVMAKTAQLEQFDEELYKVIDGDEERYLIA 237 Query: 231 TSEVSLTNLYSHEIIESK--SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 TSE ++ +S E E LPL++ + +R EAGS GRD G+ R H F K E Sbjct: 238 TSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAFEKIEQFV 297 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 +T E S+ M++ AE+ K L+L YR+V++ +G L +A K YDLE W Q Y+ Sbjct: 298 LTDPEKSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYDLEAWFPFQGEYK 357 Query: 349 EISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 E+ SCS C ++QSR + R + + K+ H LN + A R L ILENY DG Sbjct: 358 ELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCILENYQTPDG- 416 Query: 407 VTIPTVLRPYMNNLAVIK 424 V +P VL+PYM + Sbjct: 417 VNVPKVLQPYMGGKTFLP 434 >gi|184201584|ref|YP_001855791.1| seryl-tRNA synthetase [Kocuria rhizophila DC2201] gi|238689205|sp|B2GGG9|SYS_KOCRD RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|183581814|dbj|BAG30285.1| seryl-tRNA synthetase [Kocuria rhizophila DC2201] Length = 434 Score = 339 bits (868), Expect = 7e-91, Method: Composition-based stats. Identities = 147/438 (33%), Positives = 232/438 (52%), Gaps = 19/438 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI +R +P+ + R + + IL D + R I E +RA +N+ ++ Sbjct: 1 MIDINELRADPDTYRASQTARGADAGLVDRILEADSRRRSAITDFESLRAEQNAFGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E L + L + + E ++ ++L++ PN+ +E +P G Sbjct: 61 RAQGEEK----QQLLAQVKQLAADVKAAQAAADEAQATQQQLVTQFPNLIVEGIPAGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + L + + R+H E+GE L +D +R K+SG+RF L +A LE A Sbjct: 117 DFVQLRTEGTPRDFAAEGFEPRDHLELGELLDGIDMERGAKVSGSRFYFLKRDVARLETA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSL 236 L DL ++G+ ++ P LVR M GTG + D+++ D +L+ TSEV+L Sbjct: 177 LLMAAQDLAL-DNGFIPMTTPNLVRPGIMNGTGFDVEHDDEIYRVGKDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S EI++ PLR+ + +R EAGSAG+DTRG++R HQF K E+ ED+ Sbjct: 236 AGYHSDEILDLSGGPLRYAGWSSCYRREAGSAGKDTRGIIRVHQFNKLEMFVYCHPEDAA 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHER+L+ E++L+ L YRV+ GDLG SA + +D E W+ Q YRE++S S C Sbjct: 296 AEHERLLAWEEQMLQACGLAYRVIDTAAGDLGTSAARKFDCEAWIPTQGKYRELTSTSNC 355 Query: 357 GNFQSRRMNSRYR-----DPNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 +Q+RR+N R R D + K + TLNG+ +A R L+A+LE + ADGSV Sbjct: 356 TTYQARRLNIRERLPETTDAHGKVKKGGTRAVATLNGT-LATTRWLVALLETHQQADGSV 414 Query: 408 TIPTVLRPYMNNLAVIKK 425 T+P +LRPY+ V++ Sbjct: 415 TVPELLRPYLRGQEVLRP 432 >gi|219684738|ref|ZP_03539681.1| seryl-tRNA synthetase [Borrelia garinii PBr] gi|219672100|gb|EED29154.1| seryl-tRNA synthetase [Borrelia garinii PBr] Length = 425 Score = 339 bits (868), Expect = 7e-91, Method: Composition-based stats. Identities = 144/432 (33%), Positives = 237/432 (54%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR N + + ++K R L + ++SLD+K + +I KI ++ A+RN NS + Sbjct: 1 MLDFKFIRDNLDLVKKSIKARGLVLDIDKLVSLDDKRKKIITKIGELNAKRNENS---SK 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L +L LK+QL LE+E ++ +PN+ +VPIG S Sbjct: 58 MRENLDNVLKSSLMETGKILKKQLIDLEEELKKISFDFDLENKRVPNILSPDVPIGNSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG P ++H E+G L L+DFDRA ++SG++F L LE AL Sbjct: 118 DNFEIKKVGVVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ E G+ P + R+ + G G P+ + + ++L+ TSE++L Sbjct: 178 FSLN-KLREKGFDVFITPDIAREFIVDGIGFNPRGDESNIYKIESTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ +LP++ + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIID-LTLPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESQVI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ LS E+I L++ YRV+++C+ DLG A K YD+E W+ G+ Y E++S S Sbjct: 296 HDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGSYGEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G V IP L Sbjct: 356 CTDYQSRRLKIRYKDQDGQN-KFAHMVNGTAIATTRVIISILENFQDQKGGVRIPKSLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYIPFKN 425 >gi|302837498|ref|XP_002950308.1| hypothetical protein VOLCADRAFT_81049 [Volvox carteri f. nagariensis] gi|300264313|gb|EFJ48509.1| hypothetical protein VOLCADRAFT_81049 [Volvox carteri f. nagariensis] Length = 472 Score = 339 bits (868), Expect = 8e-91, Method: Composition-based stats. Identities = 132/443 (29%), Positives = 223/443 (50%), Gaps = 23/443 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R +PE + + ++R + + ++ D + R + +++ + N+ + Sbjct: 1 MLDINLFRTEKGGDPEVVRESQRRRFADVSLVDQVIEHDSEWRQVRFQLDQLNKEFNALN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +I G S D L+ ++ LK+++ + E++E EV + + I N+ + VP+ Sbjct: 61 KEIATVRKAGGNS--DELQEKSKELKKKIQMTEEKEKEVIITRDTKLVSIGNIVHDSVPV 118 Query: 116 GTSANENILIRSVGKK-----PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 N ++++ G+ P H ++ + LG+++ + +++G R LT Sbjct: 119 SQDETNNAIVKTFGEPRPSVDPDTGKKLYNHVDLVQLLGIVNLEAGQEVAGGRGYYLTNE 178 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRW 227 L +AL + + G++ V P +R E M Q+ +F D+++ T D ++ Sbjct: 179 GVLLNQALINAAL-HFAYKRGFSPVHTPFFMRQEIMAECAQLSQFDDELYKVTGEGDDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE +L ++ E LP+++ + FR E GS GRDT G+ R HQF K E Sbjct: 238 LIATSEQTLCAMHRKGWFEKSELPIKYVGYSTCFRKEVGSHGRDTLGIFRIHQFEKVEQF 297 Query: 288 SITREE--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 I E S+ E ML+ AE+ + L L YRVV++ +G+L +A K YDLE W + Sbjct: 298 VIASPEGIASWEAMEEMLANAEDFYQSLGLPYRVVNIVSGELNNAASKKYDLEAWFPASS 357 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNS----KSLKFTHTLNGSGVAVGRCLIAILENYL 401 +RE+ SCS C ++QSRR++ R R P S F H LN + A R L +LENY Sbjct: 358 TFRELVSCSNCLDYQSRRLDIRLRTPKGAAGEASKSFVHMLNSTLSATERTLCCVLENYQ 417 Query: 402 NADGSVTIPTVLRPYMNNLAVIK 424 A+G V +P L+PYM + +I Sbjct: 418 TAEG-VRVPKFLQPYMMGIELIP 439 >gi|29349720|ref|NP_813223.1| seryl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|253569915|ref|ZP_04847324.1| seryl-tRNA synthetase [Bacteroides sp. 1_1_6] gi|298383977|ref|ZP_06993538.1| serine--tRNA ligase [Bacteroides sp. 1_1_14] gi|29341630|gb|AAO79417.1| seryl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|251840296|gb|EES68378.1| seryl-tRNA synthetase [Bacteroides sp. 1_1_6] gi|298263581|gb|EFI06444.1| serine--tRNA ligase [Bacteroides sp. 1_1_14] Length = 424 Score = 339 bits (868), Expect = 8e-91, Method: Composition-based stats. Identities = 150/422 (35%), Positives = 231/422 (54%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N E + L+K+ + + + +++L++K R ++ A NS S Sbjct: 1 MLTIKQITENTEAVLRGLEKKHFKNAKETIDEVIALNDKRRTTQNLLDKNLAEVNSLSRT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG +A + + LKE L+ + + ++ ++ IPN+P + VP G Sbjct: 61 IGQLMKEGKKEEAEAARARVAELKESNKALDATMTQAATDMQNVLYTIPNIPYDSVPEGV 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSL 236 L F +D + GYTE+ P +V + YGTGQ+P M C D +LIPT+EV + Sbjct: 181 LINFFLDE-ARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I+E K LP+ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILEEKQLPIMNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H++ML E +L++L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 ESHQQMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRSAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MN 418 Sbjct: 418 CG 419 >gi|11499617|ref|NP_070859.1| seryl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304] gi|3334361|sp|O28244|SYS_ARCFU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|2648500|gb|AAB89219.1| seryl-tRNA synthetase (serS) [Archaeoglobus fulgidus DSM 4304] Length = 453 Score = 339 bits (868), Expect = 8e-91, Method: Composition-based stats. Identities = 144/449 (32%), Positives = 233/449 (51%), Gaps = 28/449 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R+NPE L + ++R L + + LD K R +K++ +R RRN + + +A Sbjct: 5 LKAVRENPEILYESQRRRGLSVDIVDRAIELDRKWREELKRVNQLRKRRNELARAVKEAK 64 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + E + E++ E+E + + L++++ IPN+ E VP+G +EN Sbjct: 65 G----EERAKVIEEAKAVSEEVKRAEEELKRLEAELEEVLLSIPNIIHESVPVGKDDSEN 120 Query: 123 ILIRSVGKKPSAIHL--------------------SREHFEIGEALGLMDFDRATKLSGA 162 + I+ GK H + E G D +RA K++GA Sbjct: 121 VPIKYWGKAKVYFEDVDAFVEMTQGMAEYEVTDVKPIGHADAVEIFGWADLERAAKVAGA 180 Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 RF L L L+ AL + +D + +T VS P ++R EA G F + ++ Sbjct: 181 RFYYLLNDLVWLDFALTMYALDF-LRKEDFTIVSPPYMMRREAYSGVTAFSDFEEVIYKV 239 Query: 223 -TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + +LI TSE + ++ E++E + LPL + ++P FR EAG+ G+DT+G+ R HQF Sbjct: 240 EDEDLYLIATSEHPIAAMHMREVLEERELPLLYAGVSPCFRKEAGAHGKDTKGIFRVHQF 299 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E E S+ HE+++ E++ + L + YR+V++CTGDLG A K YDLE W+ Sbjct: 300 NKVEQFVFCLPEQSWEWHEKLIENVEKLWQGLGIPYRIVNICTGDLGIVAAKKYDLEAWM 359 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK-FTHTLNGSGVAVGRCLIAILENY 400 Q YRE+ SCS C ++QS R++ R+ + K K F HTLN + +A R + AI+EN+ Sbjct: 360 PAQAKYREMVSCSNCTDWQSYRLDIRFAEERGKPSKGFVHTLNSTAIATTRAITAIIENF 419 Query: 401 LNADGSVTIPTVLRPYMNNLAVIKKEHIL 429 DG V IP VLR Y+ + K+ I+ Sbjct: 420 QLEDGRVEIPRVLRKYLEPIESAPKDFIM 448 >gi|254366378|ref|ZP_04982422.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis str. Haarlem] gi|134151890|gb|EBA43935.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis str. Haarlem] Length = 419 Score = 338 bits (867), Expect = 9e-91, Method: Composition-based stats. Identities = 151/427 (35%), Positives = 235/427 (55%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+ P + + R +P + +L+ D R +I + +RA + + S +G Sbjct: 1 MIDLKLLRETPNAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAASKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E L L EQ+ E +E E ++ I NV ++ VP G Sbjct: 61 GASPEERP----PLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L V +PS + ++H E+GE+LGL+D R K+SG+RF LTG A L+ L Sbjct: 117 DYAVLD--VVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTN 238 Q + L ++G+ P+LVR E M GTG + A++++ +L+ TSEV L Sbjct: 175 QLALKLAV-DNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDGLYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ PLR+ + FR EAGS G+DTRG++R HQF K E D+ E Sbjct: 234 YHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HER+L ++L R+++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD + K + TLNG+ +A R L+AILEN+ DGSV +P L P++ Sbjct: 354 FQARRLATRYRDASGK-PQIAATLNGT-LATTRWLVAILENHQRPDGSVRVPDALVPFV- 410 Query: 419 NLAVIKK 425 + V++ Sbjct: 411 GVEVLEP 417 >gi|261840156|gb|ACX99921.1| hypothetical protein HPKB_1384 [Helicobacter pylori 52] Length = 415 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 172/420 (40%), Positives = 260/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ E + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFEMVALSLKKRNHAMDDGLERLREVITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+GTS Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGTS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|308062744|gb|ADO04632.1| seryl-tRNA synthetase [Helicobacter pylori Cuz20] Length = 415 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 172/420 (40%), Positives = 258/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ E + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFEMVALSLKKRNNAMDDALERLREVITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+GTS Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGTS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRVFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEITYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|332674250|gb|AEE71067.1| serine--tRNA ligase [Helicobacter pylori 83] Length = 415 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 170/420 (40%), Positives = 259/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ E + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDKKLLLQDFEMVALSLKKRNNAMDDELERLREVITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + + LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMVQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIKNENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ I+ + LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIVSVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDV 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL 415 >gi|110639970|ref|YP_680180.1| seryl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] gi|110282651|gb|ABG60837.1| seryl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] Length = 423 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 150/428 (35%), Positives = 236/428 (55%), Gaps = 9/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I +IR+N + LKK++ E + E I+ +D+ R ++ +++ N + Sbjct: 1 MLQINYIRENKALVVEGLKKKYFADAEQKVEEIIKIDQSRRETQHSLDFLQSEANQKAKA 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG+ + +G + K + L+ + L+ E L+ ++ +PN+P VP+G Sbjct: 61 IGELMKQGKKEEAEKEKAAATDLRNKTKELQDFLTEKEEELQNVLVKLPNLPHASVPVGR 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ENI I S G+ P ++ H+E+ + ++DFD K++GA F V A L+RA Sbjct: 121 TPEENITIYSSGEIPVLHADAQPHWELIKKYDIIDFDLGNKITGAGFPVYKNKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSL 236 L F +D + GYTEV P++V + + Y TGQ+P M+ D +LIPT+EV + Sbjct: 181 LINFFLDE-AGKSGYTEVQPPIMVNEASAYATGQLPDKDGQMYYASEDKFYLIPTAEVPI 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y II+ + LP++ T P FR EAGS G D RG+ R HQF K ELV I E S+ Sbjct: 240 TNMYRDMIIKEEDLPIKNTGYTPCFRREAGSWGADVRGLNRLHQFDKVELVQIATPETSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E M + +L++L+L YR++ LC GD+ F++ T+D EV+ A Q + E+SS S Sbjct: 300 AILEEMKKHVQGLLEKLELPYRILHLCGGDMSFTSALTFDFEVYSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 N+Q+ R+ RY+ + HTLNGS +A+ R + +ILEN +G + IP VL+ Y Sbjct: 360 ENYQANRLKLRYKT--DGKTQLLHTLNGSALALPRIVASILENNQTPEG-IRIPKVLQAY 416 Query: 417 MNNLAVIK 424 +IK Sbjct: 417 T-GFDMIK 423 >gi|15893315|ref|NP_346664.1| seryl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|46577537|sp|Q97N21|SYS2_CLOAB RecName: Full=Seryl-tRNA synthetase 2; AltName: Full=Serine--tRNA ligase 2; Short=SerRS 2; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase 2 gi|15022836|gb|AAK78004.1|AE007515_4 Seryl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325507424|gb|ADZ19060.1| seryl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 425 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 142/424 (33%), Positives = 227/424 (53%), Gaps = 9/424 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+ IR + E + AL K+ +L LD++ R LI ++E ++ ++N S QI Sbjct: 1 MLDLDLIRNDTEKVKKALLKKIDNVDFTELLKLDDERRKLIHEVEVLKNKKNEASKQISN 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++G ++ + + ++ LE + + + +PN+P E+V G N Sbjct: 61 IKSQGGKVD-ESFFKDIKEISNKISELETSLEPIKGKMDTFLEALPNIPDEDVLPGGKEN 119 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ G+KP ++H E+ L+D+ R TKLSG F + G+ A LE AL Sbjct: 120 NKVVHVY-GEKPQFEFEPKDHVELSNIHDLIDYKRGTKLSGNGFWIYKGYGAILEWALLN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------TDGRWLIPTSEV 234 + I+ H + GY + P ++ E GQ PKF D++F ++++PT+E Sbjct: 179 YFIEEHIKD-GYEFILPPHILNYECGRTAGQFPKFKDEVFKVGSNGEGEGMQFILPTAET 237 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +L NL+ EI++ LP ++ P +R EAGS RGM+R HQF K E+ T+ ED Sbjct: 238 ALVNLHRDEILKEDELPKKYFAYTPCYRVEAGSYRASERGMIRGHQFNKIEMFQYTKPED 297 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E ++ AE+++K L LHYR+ L D S KTYD+EVW+ N Y+E+SS S Sbjct: 298 SDAALEELIGKAEKLVKGLGLHYRLSKLAAADCSASMAKTYDIEVWIPSMNEYKEVSSAS 357 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 ++Q+RR R+R +K +++ +TLN SG+A R L AILE + DGS+ +P VLR Sbjct: 358 NARDYQARRGKIRFRREETKKIEYVNTLNASGLATSRVLPAILEQMQDKDGSIVVPEVLR 417 Query: 415 PYMN 418 ++ Sbjct: 418 KWVG 421 >gi|218188461|gb|EEC70888.1| hypothetical protein OsI_02425 [Oryza sativa Indica Group] gi|222618678|gb|EEE54810.1| hypothetical protein OsJ_02228 [Oryza sativa Japonica Group] Length = 846 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 124/435 (28%), Positives = 206/435 (47%), Gaps = 22/435 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R +PE + + + R + + +++LD++ R +++ IR N S Sbjct: 1 MLDINLFRTEKGGDPELIRRSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ A AL T +K++L E E E +L + I N+ E VP+ Sbjct: 61 KEIGKLKA--KKEDASALIQSTEEIKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N+++R+ G++ +L + H ++ + L ++ ++ ++G R L L Sbjct: 119 SDDEANNLIVRTWGERRLEGNL-KNHVDLCKMLDIVALEKGADVAGGRGYYLKDEGVLLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVS 235 AL F + + G+ + P +R E M Q+ +F ++++ S Sbjct: 178 LALINFGLAF-LRKRGFKPMQTPFFMRKETMGKCAQLAQFDEELYKAIIIVKQSGNDTFS 236 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED- 294 L +R+ + FR EAGS GRDT G+ R HQF K E +T D Sbjct: 237 LIKCNFS--------GMRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDN 288 Query: 295 -SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ HE M+ +E+ K + L Y++VS+ +G L +A K YDLE W YRE+ SC Sbjct: 289 ESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSC 348 Query: 354 STCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S C +FQ+RR+ Y + + +S +F H LN + A R L ILEN+ +G V +P Sbjct: 349 SNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKENG-VEVPK 407 Query: 412 VLRPYMNNLAVIKKE 426 L+PYM + + + Sbjct: 408 ALQPYMGGIDFLPFK 422 >gi|219126433|ref|XP_002183462.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405218|gb|EEC45162.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 442 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 173/426 (40%), Positives = 248/426 (58%), Gaps = 28/426 (6%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL------SLVDALKNETSTL 80 +E I +L E LI++ + +R SA +G+ + + ++ K+ ++ Sbjct: 13 AEQIANLSEDRVKLIQERDGFLNQRKEASAVVGKLMRNKDNLDSSQQEELEEAKSASTAA 72 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP-------- 132 E+ E E+ +++ +L++ IPN+ ++VP G +EN + G K Sbjct: 73 SEKATNAEAALEEIQTTMDRLLAGIPNLLDDQVPFGRDESENEEVSRWGDKDALPARLEW 132 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 H ++ L + A K+SGARF L+G +A LERA+ F IDLHT++HGY Sbjct: 133 DDSFQPLWHDDVASNLNGYQVEAAVKMSGARFVALSGSIAQLERAIAMFCIDLHTTQHGY 192 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLI--------PTSEVSLTNLYSHEI 244 TEVS P +V A+ GT Q+PKF +D+F T PT+EV +TN++ ++ Sbjct: 193 TEVSVPFVVGRSALEGTSQLPKFQEDLFAITPESHTCNGEDAFLIPTAEVPVTNMHRGQV 252 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 +E LPL + P FR+EAGS GRDT+G++R HQF K ELV IT + S EHE + + Sbjct: 253 LEESDLPLSYVAWTPCFRAEAGSYGRDTKGLIRTHQFQKVELVKITTADTSDAEHETLTA 312 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRM 364 AE +L+ L+L YR V LC+GD+GFSA YDLEVWL G +REISSCS G+FQ+RRM Sbjct: 313 HAEAVLRSLELPYRKVRLCSGDIGFSARHCYDLEVWLPGAGEFREISSCSNTGDFQARRM 372 Query: 365 NSRYRDP----NSKSLK--FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 + RYR ++K LK HT+NGSG+AVGR L+A+LENY DGSV +P VLRPYM Sbjct: 373 SLRYRPKPADGSNKKLKPVLCHTINGSGLAVGRTLVAVLENYQTPDGSVVVPEVLRPYMG 432 Query: 419 NLAVIK 424 ++K Sbjct: 433 GKEILK 438 >gi|319760516|ref|YP_004124454.1| seryl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] gi|318039230|gb|ADV33780.1| seryl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] Length = 437 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 158/437 (36%), Positives = 238/437 (54%), Gaps = 16/437 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + + N + + L ++ + + + ++L KKIE I++ + S S IG+ Sbjct: 1 MLDPKLLYNNTDWVYKRLARKQFLLNTSELRQQNNLRKVLQKKIEKIQSDKKSISKIIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++ + +L + + L +QL ++ + + +K+ +PN+P + +P GT+ Sbjct: 61 IKSQ--QEDIQSLCKQANLLNDQLTSIKFKIKVLQKKIKQYQLSLPNIPDDNIPNGTTEQ 118 Query: 121 ENILIRSVGK-KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N+ I G +H +G+ +G +D A+K++G+RF VL G +A L RAL Sbjct: 119 DNVEIMRWGNLNRYDDFKPIDHVTLGKLIGEIDLSSASKIAGSRFIVLKGKIARLYRALS 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------------DGRW 227 QFM+D H HGY E P LV +++YG GQ+PKF D+F T Sbjct: 179 QFMMDTHIKNHGYQEYYVPYLVNTDSLYGAGQLPKFYKDLFHTQSIVDINCSKIKNKSYT 238 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LIPT EV L NL I+ LP++ P FR EAG+ G T G++R HQF K ELV Sbjct: 239 LIPTGEVPLINLMRDIIVNEDELPIKMVAHTPCFRLEAGTYGYRTHGLIRTHQFDKVELV 298 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + S E + + +E++L+ L+L YR LC G++ FS+CKTYDLEVWL N Y Sbjct: 299 QMVHPNKSTQALEEITNHSEQVLQLLELPYRKTLLCAGNISFSSCKTYDLEVWLPTHNSY 358 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL-NADGS 406 EI+SCS +FQ+RR+ +R+R+ K HTLN SG+AVGR L+AILEN D Sbjct: 359 CEIASCSNVKDFQARRIKARFRNKIYKKTMLLHTLNASGLAVGRTLVAILENCQLQKDRC 418 Query: 407 VTIPTVLRPYMNNLAVI 423 + IP VL YM+ + I Sbjct: 419 IKIPKVLHSYMHGITHI 435 >gi|288801194|ref|ZP_06406649.1| serine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] gi|288331805|gb|EFC70288.1| serine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] Length = 429 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 146/427 (34%), Positives = 243/427 (56%), Gaps = 7/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H + + ++ +D+K + +K++ + N+ S Q Sbjct: 1 MLTLKLITEETERVIKGLEKKHFKGAREAIDNVIGIDKKRKEAQQKLDKNKQEANTISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +G + EG + +K++ ++LK L++E + L +L+ IPN+ E+VP G Sbjct: 61 VGLLMKEGKKEEAEEIKSKVASLKVLDKQLQEEMESAENELTELLCSIPNIANEDVPEGC 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A++N+++ G+KP+ + H+++ + L+DFD K++GA F G +A L+RA Sbjct: 121 DASDNVVVVEGGEKPNLTEDALCHWDLAKKYNLIDFDLGVKVTGAGFPFYIGKMARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F ++ + GY EV P +V + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LEAFFLEE-ARKSGYLEVQPPYVVNQASGYGTGQLPDKEGQMYHAQLDNLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN++ I++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I + E S+ Sbjct: 240 TNIFRDVILDEKDLPIKRCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDKPEHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ML E + K+L+L YR++ LC GD+ F++ +D EVW A Q + E+SS S Sbjct: 300 ESLKEMLVHVEGLCKKLELPYRILKLCGGDMSFTSAICFDFEVWSAAQQRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RYR K ++ HTLNGS +A+ R + AILEN + G + +P VL PY Sbjct: 360 ESYQANRLKCRYRHTEDKKIELCHTLNGSALALPRIVAAILENNQTSKG-IRVPKVLVPY 418 Query: 417 MNNLAVI 423 +I Sbjct: 419 C-GFEMI 424 >gi|118620021|ref|YP_908353.1| seryl-tRNA synthetase [Mycobacterium ulcerans Agy99] gi|166222751|sp|A0PX13|SYS_MYCUA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|118572131|gb|ABL06882.1| seryl-tRNA synthetase SerS [Mycobacterium ulcerans Agy99] Length = 419 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 147/429 (34%), Positives = 237/429 (55%), Gaps = 12/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + R +P + +L+ D R I + +RA + + S +G Sbjct: 1 MIDLKLLREDPDVVRRSQLSRGEDPALVDALLTADTARRTAISTADSLRAEQKAASKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E + L L EQ+ E + E ++ IPNV L+ VP G Sbjct: 61 GASPEERPA----LLQRAKDLAEQVKAAEATQSETETAFTAAHMAIPNVILDGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L V +P A+ ++H E+GE+LGL+D R K++G+RF LTG A L+ L Sbjct: 117 DYAVLD--VVGEPRALDNPKDHLELGESLGLIDMARGAKVAGSRFYFLTGQGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q + L ++G+ + P+LVR E M GTG + AD+++ D +L+ TSEV + Sbjct: 175 QLALRLAV-DNGFIPMIPPVLVRPEVMAGTGFLGAHADEVYRLEADDLYLVGTSEVPMAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ PLR+ + FR EAGS G+DTRG++R HQF K E D+ E Sbjct: 234 YHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCAPADAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L+ E+L ++++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HQRLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEAWVPTQGTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ +RYRD N K + TLNG+ + R L++ILEN+ DGS +P L ++ Sbjct: 354 FQARRLATRYRDANGK-PQIAATLNGT-LGTTRWLVSILENHQQPDGSARVPAALVGFV- 410 Query: 419 NLAVIKKEH 427 V++ + Sbjct: 411 GTEVLEPKG 419 >gi|216263748|ref|ZP_03435742.1| seryl-tRNA synthetase [Borrelia afzelii ACA-1] gi|215979792|gb|EEC20614.1| seryl-tRNA synthetase [Borrelia afzelii ACA-1] Length = 425 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 145/432 (33%), Positives = 235/432 (54%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + ++K R L + ++ LD+K + +I KI ++ A+RN NS + Sbjct: 1 MLDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKIITKIGELNAKRNENS---SK 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L +L LK+QL LE+E V +PN+ +VPIG S Sbjct: 58 MRENLDKVLKISLIETGKILKKQLIDLEEELERVSFDFDLENKRVPNILSPDVPIGNSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG P ++H E+G L L+DFDRA ++SG++F L LE AL Sbjct: 118 DNFEIKKVGIIPRFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ E G+ P + R+ + G G P+ + ++L+ TSE++L Sbjct: 178 FSLN-KLREKGFNVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ +LP++ + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIID-LTLPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESSII 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ LS E+I L++ YRV+++C+ DLG A K YD+E W+ G+ Y EI+S S Sbjct: 296 HDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGGYGEITSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G V IP L Sbjct: 356 CTDYQSRRLKIRYKDQDGQN-KFAHMVNGTAIATTRVIISILENFQDEKGGVRIPKSLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYIPFKN 425 >gi|111115050|ref|YP_709668.1| seryl-tRNA synthetase [Borrelia afzelii PKo] gi|123341391|sp|Q0SNT6|SYS_BORAP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|110890324|gb|ABH01492.1| seryl-tRNA synthetase [Borrelia afzelii PKo] Length = 425 Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 145/432 (33%), Positives = 235/432 (54%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + ++K R L + ++ LD+K + +I KI ++ A+RN NS + Sbjct: 1 MLDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKIITKIGELNAKRNENS---SK 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L +L LK+QL LE+E V +PN+ +VPIG S Sbjct: 58 MRENLDKVLKISLIETGKILKKQLIDLEEELERVSFDFDLENKRVPNILSPDVPIGNSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG P ++H E+G L L+DFDRA ++SG++F L LE AL Sbjct: 118 DNFEIKKVGIIPRFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ E G+ P + R+ + G G P+ + ++L+ TSE++L Sbjct: 178 FSLN-KLREKGFNVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ +LP++ + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIID-LTLPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESSII 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ LS E+I L++ YRV+++C+ DLG A K YD+E W+ G+ Y EI+S S Sbjct: 296 HDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGGYGEITSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G V IP L Sbjct: 356 CTDYQSRRLKIRYKDQDGQN-KFAHMVNGTAIATTRVIISILENFQDEKGGVKIPKSLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYIPFKN 425 >gi|15594571|ref|NP_212360.1| seryl-tRNA synthetase [Borrelia burgdorferi B31] gi|218249339|ref|YP_002374749.1| seryl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|221217803|ref|ZP_03589271.1| seryl-tRNA synthetase [Borrelia burgdorferi 72a] gi|224533697|ref|ZP_03674285.1| seryl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] gi|225550215|ref|ZP_03771175.1| seryl-tRNA synthetase [Borrelia burgdorferi 118a] gi|226321544|ref|ZP_03797070.1| seryl-tRNA synthetase [Borrelia burgdorferi Bol26] gi|3915062|sp|O51244|SYS_BORBU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|226701651|sp|B7J1F4|SYS_BORBZ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|2688129|gb|AAC66622.1| seryl-tRNA synthetase (serS) [Borrelia burgdorferi B31] gi|218164527|gb|ACK74588.1| seryl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|221192480|gb|EEE18699.1| seryl-tRNA synthetase [Borrelia burgdorferi 72a] gi|224512990|gb|EEF83353.1| seryl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] gi|225369327|gb|EEG98780.1| seryl-tRNA synthetase [Borrelia burgdorferi 118a] gi|226232733|gb|EEH31486.1| seryl-tRNA synthetase [Borrelia burgdorferi Bol26] gi|312148980|gb|ADQ29051.1| seryl-tRNA synthetase [Borrelia burgdorferi N40] Length = 425 Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 145/432 (33%), Positives = 236/432 (54%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + ++K R L + ++ LD+K + LI KI ++ A+RN NS + Sbjct: 1 MLDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKLITKIGELNAKRNENS---SK 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L +L LK+QL LE+E V +PN+ +VPIG+S Sbjct: 58 MQENLDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNILSPDVPIGSSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG P ++H E+G L L+DFDRA ++SG++F L LE AL Sbjct: 118 DNFEIKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ + G+ P + R+ + G G P+ + ++L+ TSE++L Sbjct: 178 FSLN-KLRDKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ +LP+R + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIID-LTLPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ LS E+I L++ YRV+++C+ DLG A K YD+E W+ G+ Y E++S S Sbjct: 296 HDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGGYGEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G V IP L Sbjct: 356 CTDYQSRRLKIRYKDQDGQN-KFAHMVNGTAIATTRVIISILENFQDQKGGVRIPKSLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYIPFKN 425 >gi|224532643|ref|ZP_03673264.1| serine--tRNA ligase [Borrelia burgdorferi WI91-23] gi|224512423|gb|EEF82803.1| serine--tRNA ligase [Borrelia burgdorferi WI91-23] Length = 425 Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 145/432 (33%), Positives = 236/432 (54%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + ++K R L + ++ LD+K + LI KI ++ A+RN NS + Sbjct: 1 MLDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKLITKIGELNAKRNENS---SK 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L +L LK+QL LE+E V +PNV +VPIG+S Sbjct: 58 MQENLDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNVLSPDVPIGSSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG P ++H E+G L L+DFDRA ++SG++F L LE AL Sbjct: 118 DNFEIKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ + G+ P + R+ + G G P+ + ++L+ TSE++L Sbjct: 178 FSLN-KLRDKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ +LP+R + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIID-LTLPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ LS E+I L++ YR++++C+ DLG A K YD+E W+ G+ Y E++S S Sbjct: 296 HDEFLSIQEQIFTELEIPYRILNICSFDLGSPAYKKYDIEAWMPGRDGKGGYGEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G V IP L Sbjct: 356 CTDYQSRRLKIRYKDQDGQN-KFAHMVNGTAIATTRVIISILENFQDQKGGVRIPKSLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYIPFKN 425 >gi|195941420|ref|ZP_03086802.1| seryl-tRNA synthetase [Borrelia burgdorferi 80a] gi|216264477|ref|ZP_03436469.1| seryl-tRNA synthetase [Borrelia burgdorferi 156a] gi|223888685|ref|ZP_03623276.1| seryl-tRNA synthetase [Borrelia burgdorferi 64b] gi|225549035|ref|ZP_03770010.1| seryl-tRNA synthetase [Borrelia burgdorferi 94a] gi|215980950|gb|EEC21757.1| seryl-tRNA synthetase [Borrelia burgdorferi 156a] gi|223885501|gb|EEF56600.1| seryl-tRNA synthetase [Borrelia burgdorferi 64b] gi|225370261|gb|EEG99699.1| seryl-tRNA synthetase [Borrelia burgdorferi 94a] gi|312148176|gb|ADQ30835.1| seryl-tRNA synthetase [Borrelia burgdorferi JD1] Length = 425 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 144/432 (33%), Positives = 236/432 (54%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + ++K R L + ++ LD+K + LI KI ++ A+RN NS + Sbjct: 1 MLDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKLITKIGELNAKRNENS---SK 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L +L LK+QL LE+E V +PN+ +VPIG+S Sbjct: 58 MQENLDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNILSPDVPIGSSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG P ++H E+G L L+DFDRA ++SG++F L LE AL Sbjct: 118 DNFEIKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ + G+ P + R+ + G G P+ + ++L+ TSE++L Sbjct: 178 FSLN-KLRDKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ +LP+R + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIID-LTLPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ LS E+I L++ YR++++C+ DLG A K YD+E W+ G+ Y E++S S Sbjct: 296 HDEFLSIQEQIFTELEIPYRILNICSFDLGSPAYKKYDIEAWMPGRDGKGGYGEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G V IP L Sbjct: 356 CTDYQSRRLKIRYKDQDGQN-KFAHMVNGTAIATTRVIISILENFQDQKGGVRIPKSLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYIPFKN 425 >gi|322378360|ref|ZP_08052816.1| seryl-tRNA synthetase [Helicobacter suis HS1] gi|322380117|ref|ZP_08054370.1| seryl-tRNA synthetase [Helicobacter suis HS5] gi|321147464|gb|EFX42111.1| seryl-tRNA synthetase [Helicobacter suis HS5] gi|321149217|gb|EFX43661.1| seryl-tRNA synthetase [Helicobacter suis HS1] Length = 421 Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats. Identities = 170/419 (40%), Positives = 246/419 (58%), Gaps = 6/419 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + + + E + L KR L+PQ + + +L + + +E + +N S Sbjct: 3 MIDKKLLLHDFEAIQANLAKRFLDPQILKNLQTLLLEYKAQKLALEQAQEFKNRTSKLFF 62 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + +LK+ KE++ L + + L+ L+ IPN+ P G Sbjct: 63 E-KQKNHDQEAMSLKSALEENKEKIGHLTHRVNTLEEELEVLLHSIPNLLDPITPFGKDE 121 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ I + + +EH E+ + G ++FDR K++ +RFSVL A + RAL Sbjct: 122 SENVEITRILTPKNFDFKPKEHHELAQENGWIEFDRGVKIAKSRFSVLRKEGALISRALI 181 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 FM+D + HG+ ++ P+LV ++GTGQ+PKF +D+F + +LIPTSEVSLTN Sbjct: 182 NFMLDYNA-SHGFEIINPPILVNATTLFGTGQLPKFKEDLFKVEAEDLYLIPTSEVSLTN 240 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 LY+ EII S+ LP+ T P FR EAGSA +DT G++RQHQF K ELV+IT S + Sbjct: 241 LYADEIILSEDLPILMTAYTPCFRKEAGSASKDTHGIIRQHQFDKVELVAITHPTKSDSM 300 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 +ML A ILK L+L +R V LC+GDLGFSA T D+EVWL GQ+ YREISS S + Sbjct: 301 QAKMLEIASGILKALELPHRFVQLCSGDLGFSASNTVDIEVWLPGQDCYREISSVSNTRD 360 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RY+ +K F HTLNGS +AVGR L+AI+ENY +G + IP VL PY+ Sbjct: 361 FQARRAKIRYK--ENKKNAFVHTLNGSSLAVGRTLVAIMENYQTKEGLIEIPKVLEPYL 417 >gi|257067880|ref|YP_003154135.1| seryl-tRNA synthetase [Brachybacterium faecium DSM 4810] gi|256558698|gb|ACU84545.1| seryl-tRNA synthetase [Brachybacterium faecium DSM 4810] Length = 423 Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats. Identities = 160/428 (37%), Positives = 227/428 (53%), Gaps = 13/428 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NPE + A + R +P + +L D + R E RA + S ++ Sbjct: 1 MIDLRHLRENPEAVRDAQRARRRDPATVDAVLEADVRWRETTAAFESARAEQKSFGKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E AL E L + LE E E + + IPN E P G Sbjct: 61 QAKGEEK----QALLAEVKQLAADVKRLEAEAGEALTIRDAALREIPN-LAEGAPEGLED 115 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + VG+ P H ++H EI E L +D R K+SGARF L G A LE A+ Sbjct: 116 DFTVREH-VGEVPRFDHPVKDHLEIAEGLRAIDMARGAKVSGARFYFLRGIGAQLELAIL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLT 237 ID T G+T + P LV EAM GTG + + AD+++ D +L+ TSEV+L Sbjct: 175 NSAIDQAT-RAGFTPMITPTLVLPEAMEGTGFLGEHADEVYHLDKDDDLYLVGTSEVALA 233 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 + EII+ PLR+ + +R EAGS G+DTRG++R HQF K E+ S R EDS+ Sbjct: 234 GYHKDEIIDLSDGPLRYAGWSACYRREAGSYGKDTRGIIRVHQFHKVEMFSYCRIEDSYA 293 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EHER+L E++ R+D+ YR++ GDLG SA + +D E W+ Q YRE++S S Sbjct: 294 EHERLLDWEREMMARIDVPYRIIDTAAGDLGTSAARKFDCEAWMPSQETYRELTSTSNTT 353 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR+N R R + L+ TLNG+ + R L AILEN+ DGSV +P LRPY+ Sbjct: 354 QFQARRLNIRERTEDG--LRPVATLNGT-LGTTRFLAAILENHQQGDGSVVVPEGLRPYL 410 Query: 418 NNLAVIKK 425 V + Sbjct: 411 GGREVFEP 418 >gi|108801992|ref|YP_642189.1| seryl-tRNA synthetase [Mycobacterium sp. MCS] gi|119871144|ref|YP_941096.1| seryl-tRNA synthetase [Mycobacterium sp. KMS] gi|123177925|sp|Q1B1V1|SYS_MYCSS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|166222749|sp|A1UN98|SYS_MYCSK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|108772411|gb|ABG11133.1| seryl-tRNA synthetase [Mycobacterium sp. MCS] gi|119697233|gb|ABL94306.1| seryl-tRNA synthetase [Mycobacterium sp. KMS] Length = 417 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 156/427 (36%), Positives = 242/427 (56%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIE-DIRARRNSNSAQIG 59 M+D++++R+NP+ + + + R +P L + R ++RA + + S ++G Sbjct: 1 MIDLKFLRENPDAVRASQRSRGEDPALVDALLDADAARRAAVSAADNLRAEQKAASKKVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + L + L EQ+ E + + + I NV +E VP G Sbjct: 61 KASPEERPA----LLTQAKELAEQVKAAEAAQADADRTFTAAHMAISNVVIEGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +L V +P AI ++H E+GEALGL+D +R K++G+RF LTG A L+ L Sbjct: 117 CFAVLD--VVGEPRAIDDPKDHLELGEALGLIDMERGAKVAGSRFYFLTGRGALLQLGLM 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q + L T ++G+T V P+LVR E M GTG + AD+++ +D +L+ TSEV L Sbjct: 175 QLAVRLAT-DNGFTLVIPPVLVRPEVMAGTGFLGAHADEVYRLESDDMYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EII+ + P R+ + FR EAGS G+DTRG++R HQF K E + ED+ E Sbjct: 234 YHADEIIDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAAAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L E+L +++ YRV+ + GDLG SA + YD E W+ Q YRE++S S C Sbjct: 294 HDRLLGWQREMLALIEVPYRVIDVAAGDLGSSAARKYDCEAWVPTQQTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+++RYRD N K + TLNG+ +A R L+AILEN+ DGSV +P L P++ Sbjct: 354 FQARRLSTRYRDENGK-PQIAATLNGT-LATTRWLVAILENHQQPDGSVRVPAALVPFV- 410 Query: 419 NLAVIKK 425 V++ Sbjct: 411 GTEVLEP 417 >gi|293363963|ref|ZP_06610699.1| serine--tRNA ligase [Mycoplasma alligatoris A21JP2] gi|292552453|gb|EFF41227.1| serine--tRNA ligase [Mycoplasma alligatoris A21JP2] Length = 422 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 183/427 (42%), Positives = 272/427 (63%), Gaps = 8/427 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+I++I +N + +L R+ + E IL L +K ++ + + A+ S + G Sbjct: 1 MLNIKFILENEVKIRQSLINRNNDLDKFEKILELGKKRGAIMSHAQSLSAQLAKLSKEFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + S +D LK E + +KE E +E+ S + +L+S IPN+PL+E+P+G Sbjct: 61 IYK--NDKSAIDKLKKEIAQVKEIQNQANAEANELNSQITELLSYIPNLPLDEIPVGKDE 118 Query: 120 -NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++ + + H+EI + L L D +RA K+SG+RF + A L RAL Sbjct: 119 LMNKVIKTYDHLGRGLVSGKKPHYEIAKELDLFDLERAVKMSGSRFVLYKNKGAKLVRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 FM+DLH GY E+ P+LV+D+ ++GTGQ+PKF +D+F + +LIPT+EV LT Sbjct: 179 MNFMLDLH-ETKGYEEILPPVLVKDKMLFGTGQLPKFKEDLFFLESSNLYLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y+ EI++ PL FT FRSEAGS+G+DTRG++R HQF K ELV IT E+D+ + Sbjct: 238 NIYNDEIVDLSK-PLAFTAFTECFRSEAGSSGKDTRGIIRNHQFKKVELVKITSEQDAIS 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E+E+M+ A+++L +L++ +R + LCTGDLGFSA KT DLE+WL + YRE+SS S G Sbjct: 297 EYEKMVEDAKDVLVKLEIPFRELLLCTGDLGFSARKTIDLELWLPSEIKYREVSSISYMG 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RYRD N+ + ++ HT+NGSG+A+ R + +ILENY N DGS+T+P VL PYM Sbjct: 357 DFQARRGMIRYRDQNN-ATQYAHTMNGSGLAIDRIIASILENYQNEDGSITVPKVLIPYM 415 Query: 418 NNLAVIK 424 N L VIK Sbjct: 416 NGLEVIK 422 >gi|51598487|ref|YP_072675.1| seryl-tRNA synthetase [Borrelia garinii PBi] gi|67461723|sp|Q662D8|SYS_BORGA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|51573058|gb|AAU07083.1| seryl-tRNA synthetase [Borrelia garinii PBi] Length = 425 Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats. Identities = 140/423 (33%), Positives = 233/423 (55%), Gaps = 11/423 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + ++K R L + ++ LD+K + +I +I ++ A+RN NS + Sbjct: 1 MLDLKFIRDNLDLVKKSIKARGLVLDIDKLVYLDDKRKKIITQIGELNAKRNENS---SK 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +L LK+QL LE+E ++ +PN+ +VPIG S Sbjct: 58 MRENLDNVFKSSLMETGKILKKQLIDLEEELKKISFDFDLENKRVPNILSPDVPIGNSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG P ++H E+G L L+DFDRA ++SG++F L LE AL Sbjct: 118 DNFEIKKVGVVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ E G+ P + R+ + G G P+ + + ++L+ TSE++L Sbjct: 178 FSLN-KLREKGFDVFITPDVAREFIVDGIGFNPRGDESNIYKIESTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ +LP++ + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIID-LTLPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESQVI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ LS E+I L++ YRV+++C+ DLG A K YD+E W+ G+ Y E++S S Sbjct: 296 HDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGSYGEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G V IP L Sbjct: 356 CTDYQSRRLKIRYKDQDGQN-KFAHMVNGTAIATTRVIISILENFQDEKGGVRIPKSLVK 414 Query: 416 YMN 418 Y Sbjct: 415 YTG 417 >gi|85057912|ref|YP_456828.1| seryl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] gi|123518041|sp|Q2NIJ4|SYS_AYWBP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|84790017|gb|ABC65749.1| seryl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] Length = 424 Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats. Identities = 168/428 (39%), Positives = 263/428 (61%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD+ ++ QN + L+KR + L ++ + L+ +I+++R+++N ++ ++ Sbjct: 1 MLDLNFVVQNLPSVIAKLEKRQQSFAYLNKLPLLAQQRKSLLLQIQNLRSQKNQSAKKVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + E + L++ L LE++ + ++S PN+P + +PIGT Sbjct: 61 Q--KANAKEDIALFLQENNFLRDDLQKLEQKLKLQEQEIFDILSITPNLPHDSLPIGTDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N + G+ + ++H + E L ++DF RA+K+SG+ F V G A LERAL Sbjct: 119 KDNKELYCEGQIRTFPFTPKDHVYLAEKLDILDFKRASKISGSGFVVCKGLGARLERALI 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSL 236 QFM+DLH S+ GY E+ P ++ +++M+ TGQ+PKF D+++ + +L PT+EV Sbjct: 179 QFMMDLH-SKKGYQEIIPPYIINEKSMFATGQLPKFEDEVYKLYNSKNNWYLNPTAEVPT 237 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 NL+ EI + +LP+++ + +FR EAGSAG+DTRG+ RQHQF K EL+ ++S+ Sbjct: 238 INLHREEIFKPGTLPIKYVSYTTAFRQEAGSAGKDTRGIFRQHQFNKVELIQFCHPQNSY 297 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E+ML +EEILK L L YRVV L TGDLGFS KTYDLEV+L N YREI S S Sbjct: 298 EYLEQMLKDSEEILKLLKLPYRVVLLSTGDLGFSMSKTYDLEVFLPSYNCYREIGSISNS 357 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR N + ++P + ++ H LNGSG+AVGR +IAILENY N DG++T+P +L+ Y Sbjct: 358 CDFQARRANIKMKNPKNNKNEYVHILNGSGLAVGRTVIAILENYQNQDGTITVPEILQSY 417 Query: 417 MNNLAVIK 424 + +IK Sbjct: 418 L-GTDIIK 424 >gi|198276597|ref|ZP_03209128.1| hypothetical protein BACPLE_02793 [Bacteroides plebeius DSM 17135] gi|198270122|gb|EDY94392.1| hypothetical protein BACPLE_02793 [Bacteroides plebeius DSM 17135] Length = 424 Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats. Identities = 147/422 (34%), Positives = 226/422 (53%), Gaps = 7/422 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I ++ + + L+K+ + + +L L+++ R +++ + NS S Sbjct: 1 MLTIKQITEDTDKVIRGLEKKHFANAKETIAKVLELNDQRRSAQNQLDKNLSEVNSTSKT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG +A K + +KE L+ + ++ L+ IPNVP E VP G Sbjct: 61 IGALMKEGKKEEAEAAKARVAEIKEISKELQATMDKAAEDMQNLLYTIPNVPYESVPEGF 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A +N++ + G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 GAEDNVVEKMGGMETELPKDALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D GY E+ P +V + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LINFFLDE-ARAAGYEEIMPPTVVNAASGYGTGQLPDKEGQMYHCNLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSK 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +LK+L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLKKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRTAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPY 417 Query: 417 MN 418 Sbjct: 418 CG 419 >gi|168003459|ref|XP_001754430.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694532|gb|EDQ80880.1| predicted protein [Physcomitrella patens subsp. patens] Length = 464 Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats. Identities = 141/436 (32%), Positives = 222/436 (50%), Gaps = 17/436 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ +PE + + ++R + + ++ LD++ R ++++IR N Sbjct: 1 MLDILLFREERGNDPERIRESQRRRFASVELVDEVIKLDKEWRQRQYEVDNIRKEVNKV- 59 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q G + L E S L+E EKE E +++ + + N+ + VPI Sbjct: 60 -QDGIKKKKMAKEDTAELLVEKSKLEEAKIAKEKETAECKVAMEASLRLVGNLVHDSVPI 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 + + N+++R+ G P H ++ LG++D + T ++G R L + L Sbjct: 119 DNNEDNNLVVRTWG-TPRDQSGLVNHVDLVNKLGIVDLEAGTDVAGGRGYFLKQYGVMLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +AL F + + GYT + P +R E M Q+ +F ++++ T D ++LI T+ Sbjct: 178 QALINFGLAFLL-KRGYTLLQTPFFMRQEVMAECAQLAQFDEELYKVTGEGDDKYLIATA 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + ++ K+LP+++ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 237 EQPLCSFHRGSWMDPKALPIKYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSP 296 Query: 293 ED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 D S+ HE ML +EE ++L L YRVVS+ +G L SA K YDLE W YRE+ Sbjct: 297 NDNDSWEVHEEMLKNSEEFYQQLGLPYRVVSIVSGALNDSAAKKYDLEAWFPASKTYREL 356 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C ++QSR + RY + N + + H LN + A R L ILENY DG V Sbjct: 357 VSCSNCTDYQSRNLEIRYGQKKMNDQVKNYCHLLNSTLTATERTLCCILENYQTPDG-VR 415 Query: 409 IPTVLRPYMNNLAVIK 424 +P VL+P+M N + Sbjct: 416 VPEVLQPFMLNTEFLP 431 >gi|56963193|ref|YP_174924.1| seryl-tRNA synthetase [Bacillus clausii KSM-K16] gi|56909436|dbj|BAD63963.1| seryl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 425 Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats. Identities = 144/428 (33%), Positives = 232/428 (54%), Gaps = 6/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIRQN + ++ + ++ D++ R L+ ++E +R RN S +I Sbjct: 1 MLDIKWIRQNQAEVQTIADQKGIPISIHQLVEYDDRRRALLHELEQLRQDRNRLSQEISV 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + VD K + ++L +E+E EV K+L+ +PNV + P+G S + Sbjct: 61 FMRSHEREKVDHHKKRVKEINQRLHTIEEEHKEVEGHYKQLMLYVPNVVSPDTPVGGSDH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I+ VG+ + ++H +G+ ++D R K +G+R LT A L RA+ Q Sbjct: 121 DNVEIKRVGEPTTFAFEPKDHVALGKLHQMIDLPRGVKTAGSRNYYLTDMGALLHRAVQQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 ID+ + G+ + PL+VR EA+ T P + F + +WL+ TSEV L + Sbjct: 181 LAIDV-LVQRGFKLLEVPLMVRTEALLNTAHFPLSQEQTFKMAEEDKWLVGTSEVPLVSY 239 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 Y HE+I+ P+R ++ FR+E GSAG+D G+ R HQF K E V + + S Sbjct: 240 YDHEMIDVAE-PIRLAAVSTCFRNEVGSAGKDVHGLYRLHQFAKVEQVILCEANLDISEQ 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + + + AEEIL L+L YR++++CTGD+ K +D+E W+ ++ Y E S S Sbjct: 299 LFQEITANAEEILSLLELPYRIMAVCTGDMSQKTYKQWDIETWMPSRHGYGETHSASNLL 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR N RYRD + K +F +TLN + +A R LI +LEN+ DGS+ IP L+ YM Sbjct: 359 DFQARRSNIRYRDADGK-TQFCYTLNNTAIASPRILIPLLENHQQEDGSIRIPLALQRYM 417 Query: 418 NNLAVIKK 425 ++ Sbjct: 418 QGRERLEP 425 >gi|330814078|ref|YP_004358317.1| seryl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487173|gb|AEA81578.1| seryl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 392 Score = 335 bits (860), Expect = 7e-90, Method: Composition-based stats. Identities = 186/387 (48%), Positives = 259/387 (66%), Gaps = 2/387 (0%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 +S DE R ++ ++++ +RNS S +G +G+ L E + +K ++ +E Sbjct: 2 ISNDESLRKNLELQQNLQNKRNSISKALGAHKDKGSD-DFKKLSTEVTEVKNEINKIETS 60 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 ++ + + + +PN+PLE+VPI N+ ++ VG+ H EIGE+L L Sbjct: 61 ISDLKKKIDETLYTLPNIPLEDVPIAEDEKGNVELKKVGQIKEFDFKPLSHDEIGESLDL 120 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 +DF+ AT+LSG+RFS+L LA LERAL FM+D+HT E+GY E + P+LV +AMYGTG Sbjct: 121 IDFETATELSGSRFSILKKDLAKLERALVNFMLDIHTEENGYDEYNVPILVNTKAMYGTG 180 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 Q+PKF DD F T + WLIPT EV LTN+ +++I + + LPLR+ P FR EAGSAG+ Sbjct: 181 QLPKFRDDQFQTNNDLWLIPTGEVPLTNMVANKITKYEKLPLRYVAATPCFRLEAGSAGK 240 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFS 330 DT+GM+RQHQF K ELVSI + E E E++L AE +L+ L L YRV+ L TGD+GFS Sbjct: 241 DTKGMMRQHQFSKVELVSIVQPEFREKELEKLLKSAERVLELLKLPYRVMLLSTGDMGFS 300 Query: 331 ACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVG 390 A KTYD+EVW+ Q YREISSCS+C FQS RM +RY+ ++K+ + TLNGSG+A+G Sbjct: 301 AEKTYDIEVWIPSQEKYREISSCSSCSTFQSNRMKARYKTVDNKN-ELLATLNGSGLAIG 359 Query: 391 RCLIAILENYLNADGSVTIPTVLRPYM 417 R +IAILENY N DGS+ IP VL+ YM Sbjct: 360 RTIIAILENYQNKDGSIEIPLVLQKYM 386 >gi|291303608|ref|YP_003514886.1| seryl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290572828|gb|ADD45793.1| seryl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 422 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 144/426 (33%), Positives = 234/426 (54%), Gaps = 13/426 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++ +R+NP+ + + + R Q + +++ D NR + + E +RA + ++ + Sbjct: 6 IDLRTVRENPDLIRRSQQVRGESEQVVDDLIAADTANREALARFETLRAEQKQLGKRVSR 65 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + L T L ++ E + +L+ +PN+ E VP G + Sbjct: 66 ASGDEKQE----LLVRTKELSGEVKTAEAAVNAAAETLRAAQLAVPNIVEEGVPAGGEDD 121 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +L + R+H E+GE LG +D +R K SG+RF L G A L++AL Sbjct: 122 FVVLR--EVGERKVPETCRDHLELGEILGAIDMERGAKTSGSRFYYLVGMGALLQQALLN 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 + G+T + P++VR EAM GTG + A +++ + +L+ TSEV L + Sbjct: 180 LALQQAVET-GFTPMIPPVMVRPEAMEGTGFLGAHASEVYYLEDEELYLVGTSEVPLASY 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI++ + P R+ + FR EAGS G+DTRG++R HQF K E+ S R E++ EH Sbjct: 239 HAKEILDLEQ-PKRYAAWSSCFRKEAGSYGKDTRGIIRVHQFDKIEMFSYCRPEEAAAEH 297 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 ER+L E +L ++++ YRV+ GDLG SA + +D E W+ Q YRE++S S CG F Sbjct: 298 ERLLGFEERMLAKIEVPYRVIDTAGGDLGSSAARKFDCEAWIPSQERYRELTSTSNCGTF 357 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+ +RYRD N K + TLNG+ +A R ++AILEN+ DGSV +P LRP++ Sbjct: 358 QARRLGTRYRDENGK-PQTAATLNGT-LATTRWIVAILENHQQPDGSVRVPEALRPFL-G 414 Query: 420 LAVIKK 425 V++ Sbjct: 415 REVLEP 420 >gi|126437973|ref|YP_001073664.1| seryl-tRNA synthetase [Mycobacterium sp. JLS] gi|166222748|sp|A3Q7P6|SYS_MYCSJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|126237773|gb|ABO01174.1| seryl-tRNA synthetase [Mycobacterium sp. JLS] Length = 417 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 156/427 (36%), Positives = 241/427 (56%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIE-DIRARRNSNSAQIG 59 M+D++++R+NP+ + + + R +P L + R ++RA + + S ++G Sbjct: 1 MIDLKFLRENPDAVRASQRSRGEDPALVDALLDADAARRAAVSAADNLRAEQKAASKKVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E + L L EQ+ E + + + I NV +E VP G Sbjct: 61 KASPEERPA----LLTRAKELAEQVKAAEAAQADADRTFTAAHMAISNVVIEGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +L V +P AI ++H E+GEALGL+D +R K++G+RF LTG A L+ L Sbjct: 117 CFAVLD--VVGEPRAIDDPKDHLELGEALGLIDMERGAKVAGSRFYFLTGRGALLQLGLM 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q + L T ++G+T V P+LVR E M GTG + AD+++ +D +L+ TSEV L Sbjct: 175 QLAVRLAT-DNGFTLVIPPVLVRPEVMAGTGFLGAHADEVYRLESDDMYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EII+ + P R+ + FR EAGS G+DTRG++R HQF K E + ED+ E Sbjct: 234 YHADEIIDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAAAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L E+L +++ YRV+ + GDLG SA + YD E W+ Q YRE++S S C Sbjct: 294 HDRLLGWQREMLALIEVPYRVIDVAAGDLGSSAARKYDCEAWVPTQQTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+++RYRD N K + TLNG+ +A R L+AILEN+ DGSV +P L P++ Sbjct: 354 FQARRLSTRYRDENGK-PQIAATLNGT-LATTRWLVAILENHQQPDGSVRVPAALVPFV- 410 Query: 419 NLAVIKK 425 V++ Sbjct: 411 GTEVLEP 417 >gi|108563858|ref|YP_628174.1| seryl-tRNA synthetase [Helicobacter pylori HPAG1] gi|123073705|sp|Q1CRC2|SYS_HELPH RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|107837631|gb|ABF85500.1| seryl-tRNA synthetase [Helicobacter pylori HPAG1] Length = 415 Score = 335 bits (859), Expect = 9e-90, Method: Composition-based stats. Identities = 170/420 (40%), Positives = 258/420 (61%), Gaps = 8/420 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ + + E + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFDKVALSLKKRNHAMGDELERLREVITHYKKQLIELEGLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KVDTSDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRVFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 M+D + ++G+ + P LV ++ ++GTGQ+PKF +D+F + +LIPT+EV+LT Sbjct: 179 IHLMLDFN-EKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 238 NLYNDTIIGVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHSKESDA 297 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ML A EILK L+L +R V LC+ DLGFSA T D+EVWL GQN YREISS S Sbjct: 298 MQEHMLESASEILKALELPHRFVQLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTR 357 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ DGS+ IP L Y+ Sbjct: 358 DFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQEDGSIHIPKALEKYL 415 >gi|311897014|dbj|BAJ29422.1| putative seryl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 431 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 183/431 (42%), Positives = 246/431 (57%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D + + + L +R + +L + I+ +++RAR + ++ + Sbjct: 1 MHDARVLIDLGDEAVRLLARRGYTLDLSALEALQSRRNSGIQAGDELRARSKQVAQEVQR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G V LK LKEQ+ E E +V L L+ IPN+P +E P G S Sbjct: 61 TAKQGG--DVGELKETARALKEQVQQNEAELEQVRQELTDLLLTIPNLPDDEAPDGFSDA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + +R VG+ P ++H ++GEA+G++DF RA KLSG+RFSVL G A LERA+ Sbjct: 119 DARELRRVGEPPRFDFTPKDHVDLGEAMGILDFGRAAKLSGSRFSVLRGAGAALERAIAS 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 ++D+HT HGY E + P LV M GTGQ+PKF +D+F T +LIPT+EV LT Sbjct: 179 LLLDVHTRRHGYVEHAVPYLVNRRTMTGTGQLPKFEEDLFKTGVADRDLFLIPTAEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ EI+ LPL T P FRSEAGS GRDTRG++R HQF K E+V I E + Sbjct: 239 NLYADEIVPPAELPLALTAYTPCFRSEAGSYGRDTRGLIRMHQFSKVEMVRICAAEQARE 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + + M+S AE L+ L+L YRVV+L GD GFSA TYDLEVWL GQ YREISS S G Sbjct: 299 QMQLMVSHAEACLQELELAYRVVALAAGDTGFSAQLTYDLEVWLPGQETYREISSVSDFG 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ RR R RD K T+NGSG+ + R + A+LE + ADGSV +P L PY+ Sbjct: 359 TFQGRRAGIRTRDEKGKPT-PAATINGSGLPLARTIAAVLEQHQQADGSVLLPKALHPYL 417 Query: 418 NNLAVIKKEHI 428 A I + Sbjct: 418 -GFARIAADGT 427 >gi|320104218|ref|YP_004179809.1| seryl-tRNA synthetase [Isosphaera pallida ATCC 43644] gi|319751500|gb|ADV63260.1| seryl-tRNA synthetase [Isosphaera pallida ATCC 43644] Length = 432 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 149/436 (34%), Positives = 238/436 (54%), Gaps = 17/436 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ----SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD++++ + + + + R + + I+ LD + R L + +E++R R+N Sbjct: 1 MLDLKYVIAHADEVKANCRNRCVAQDIIDEVDQIVRLDAERRELTQAVEEVRRRQN---- 56 Query: 57 QIGQA-IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +I QA E N L E LK+ + E + LK+ ++ IPN + PI Sbjct: 57 EIAQATSKEKNPDARARLVAEGRALKDSIADREASLKALEDDLKRRLARIPNRTHPDAPI 116 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G + ++ +R VG P+ ++H E+G+AL L+DF+ A K+SG F L L+ Sbjct: 117 GRTEEDSRELRRVGSIPTFTFPPKDHVELGKALDLIDFESAAKVSGHGFYFLKNDAVLLD 176 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSE 233 AL +F IDL GYT V P L R+ + G G P+ + L+ T+E Sbjct: 177 LALQRFAIDL-LIRKGYTPVVTPDLARNAILEGIGFAPRGPETQVYSIEDTDLSLVGTAE 235 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++L L++ ++++ LP+R+ L+ FR+EAG+AGR ++G+ R HQF K E+ + E Sbjct: 236 ITLGGLHADDLLDEADLPIRYVGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFVFSTPE 295 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA---GQNLYREI 350 S H+ +L+ EEI + L + YRV+ +CTGDLG A + +DLE W+ Y EI Sbjct: 296 TSDALHKELLAIEEEIFQALGIPYRVLDICTGDLGGPAARKFDLEAWMPGRGEGGEYGEI 355 Query: 351 SSCSTCGNFQSRRMNSRYRD-PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 +S S C ++QSRR+N RYR ++ +F HTLNG+ +A+ R LIA++EN+ A G++ I Sbjct: 356 TSTSDCWDYQSRRLNVRYRPIDKNQKPRFVHTLNGTAIAISRALIALMENHQTAHGAIVI 415 Query: 410 PTVLRPYMNNLAVIKK 425 P LRPY+ VI Sbjct: 416 PEPLRPYV-GKDVIGP 430 >gi|325297897|ref|YP_004257814.1| seryl-tRNA synthetase [Bacteroides salanitronis DSM 18170] gi|324317450|gb|ADY35341.1| seryl-tRNA synthetase [Bacteroides salanitronis DSM 18170] Length = 424 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I ++ E + L+K+H + + L+ K R ++++ A N+ S Sbjct: 1 MLTIKQITEDTEKVIRGLEKKHFANAKEAIAKAIELNNKRRTAQGQLDNNLAEVNATSKT 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EG +A K + +KE L+ E + L+ L+ IPNVP +EVP G Sbjct: 61 IGQLMKEGKKEEAEAAKARVAEIKEASKGLQAEMDQAAEDLQNLLYTIPNVPYDEVPEGA 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 SA +N++++ G + + H+E+ + L+DFD K++GA F V G A L+RA Sbjct: 121 SAEDNLVVKMGGMETELPKDALPHWELAKKYNLIDFDLGVKITGAGFPVYRGQGARLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 L F +D GY E+ P +V + YGTGQ+P M+ D +LIPT+EV + Sbjct: 181 LINFFLDE-ARAAGYEEIMPPTVVNAASGYGTGQLPDKEGQMYHCNLDDLYLIPTAEVPV 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I E S Sbjct: 240 TNIYRDVILDEKQLPIKNCAYTECFRREAGSYGKDVRGLNRLHEFSKVELVRIDTPEHSR 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 H+ ML E +LK+L+L YR++ LC GD+ F+A YD EV+ Q + E+SS S Sbjct: 300 QSHQEMLDHVEGLLKKLELPYRILRLCGGDISFTAAICYDFEVYSEAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ R+ RYR N K + HTLNGS +A+ R + A+LEN +G + IP L PY Sbjct: 360 DTYQANRLKCRYRTAN-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALIPY 417 Query: 417 MNNLAVIK 424 +IK Sbjct: 418 C-GFDMIK 424 >gi|325142845|gb|EGC65213.1| seryl-tRNA synthetase [Neisseria meningitidis 961-5945] Length = 426 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 180/416 (43%), Positives = 249/416 (59%), Gaps = 12/416 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R N + L +R + + +L+E+ + + K E+++A RNS S QIG Sbjct: 1 MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A ++ + +K L + V L + IPN+P E+VP G Sbjct: 61 LKGQGKHEEAQAAMDQVAQIKTDLEQAAADLEAVQKELDAWLLSIPNLPHEDVPFGKDET 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R VG ++H ++GE LG +DF+ KLSGARF+V+ G +A L RAL Q Sbjct: 121 ENVEVRKVGTPREFDFEIKDHVDLGEPLG-LDFEGGAKLSGARFTVMRGQIARLHRALAQ 179 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------TTDGRWLIPTSE 233 FM+D HT +HGYTE P +V D + GTGQ+PKFA+D+F T ++LIPT+E Sbjct: 180 FMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAE 239 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 V+LTN + II S+ LPL+ T +P FRSEAGS G+DTRG++RQHQF K E+V I E Sbjct: 240 VTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPE 299 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M+ AE ILK L+L YRV++LCTGD+GF A KTYDLEVW+ Q + S Sbjct: 300 KSYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQIPTAK-SQA 358 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 + F +RRM R +K +GSG+AVGR L+A+LEN+ NADGS+ I Sbjct: 359 APTARFPARRMK---RVSKTKRKTLGTYFDGSGLAVGRTLVAVLENHQNADGSINI 411 >gi|225552155|ref|ZP_03773095.1| seryl-tRNA synthetase [Borrelia sp. SV1] gi|225371153|gb|EEH00583.1| seryl-tRNA synthetase [Borrelia sp. SV1] Length = 425 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 146/432 (33%), Positives = 235/432 (54%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + ++K R L + ++ LD K + LI KI ++ A+RN NS + Sbjct: 1 MLDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDYKRKKLITKIGELNAKRNENS---SK 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L +L LK+QL LE+E V +PN+ +VPIG+S Sbjct: 58 MRENLDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNILSPDVPIGSSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG P ++H E+G L L+DFDRA ++SG++F L LE AL Sbjct: 118 DNFEIKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ E G+ P + R+ + G G P+ + ++L+ TSE++L Sbjct: 178 FSLN-KLREKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ +LP+R + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIID-LTLPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ LS E+I L++ YRV+++C+ DLG A K YD+E W+ G+ Y EI+S S Sbjct: 296 HDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGGYGEITSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G + IP L Sbjct: 356 CTDYQSRRLKIRYKDQDGQN-KFAHMVNGTAIATTRVIISILENFQDQKGGIRIPKSLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYIPFKN 425 >gi|255557773|ref|XP_002519916.1| seryl-tRNA synthetase, putative [Ricinus communis] gi|223540962|gb|EEF42520.1| seryl-tRNA synthetase, putative [Ricinus communis] Length = 447 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 132/439 (30%), Positives = 215/439 (48%), Gaps = 17/439 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ N E + + ++R + I+ LD++ R +++++R N + Sbjct: 1 MLDINLFREDKGHNSELIWESQRRRFANVNIVDEIILLDKEWRQRQFELDNLRKDFNKIN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q+ + G + N T+ K E + E +L K + + N+ + VPI Sbjct: 61 KQVAKLKIAG--EDATEMINNTNENKRLSAEKEAQVQEAALALNKKLEQVGNLVHDSVPI 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N +IR G + + H E+ E LG+ D + ++G R L G L Sbjct: 119 SNDEANNFVIRVWG-EKRWEPKLKNHVELVEFLGIADTKKGANVAGGRGYYLKGAGVRLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +AL F +D + GYT + P +R + M Q+ +F ++++ T D ++LI T+ Sbjct: 178 QALINFGLDF-LEKRGYTALQTPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIGTA 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+R+ + F EAGS GRDT G+ R HQF K E T Sbjct: 237 EQPLCAYHLDDWIHPSQLPIRYAGYSSCFCKEAGSHGRDTLGIFRVHQFEKVEQFCNTSP 296 Query: 293 E--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 DS+ HE M+ +E+ K L++ Y+VV++ +G L +A K YDLE W RE+ Sbjct: 297 NGNDSWAMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASETCREL 356 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C ++QSR++ RY + N ++ ++ H LN + A R L ILENY +G + Sbjct: 357 VSCSNCTDYQSRKLEIRYGQKKSNEQAKQYVHLLNSTLTATERTLCCILENYQKENG-IE 415 Query: 409 IPTVLRPYMNNLAVIKKEH 427 IP LR YM ++ + ++ Sbjct: 416 IPEPLRVYMGGVSFLPFQN 434 >gi|27777566|gb|AAN10249.1| seryl-tRNA synthetase [Streptomyces viridifaciens] Length = 426 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 179/431 (41%), Positives = 248/431 (57%), Gaps = 10/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D + + L++R ++ + L ++ I + +R R NS + ++ + Sbjct: 1 MHDPHELLRQGAQAQHRLRRRRYALDTDTLRKLVQQRAEAIAHKDSLRGRLNSVTRKLAE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N + +DA K LK Q+ ++ + S L + +PN+P ++ P G + Sbjct: 61 QRGARNQNDLDAAK----ELKSQIHPADEAQRIADSDLNSFLLAVPNIPADDAPDGGPED 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + IR G++P+ R+H E+ + GL+D RA+KLSG+RF+V G A LERAL Sbjct: 117 PPVEIRRWGRQPTFDFEPRDHVELATSAGLLDLPRASKLSGSRFAVFRGAGAMLERALTS 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLT 237 F++DLHT EH Y E S P LV E M GTGQ+PKFADD+F T +LIPT+EV L Sbjct: 177 FLLDLHTKEHQYIEHSVPYLVTPETMTGTGQLPKFADDLFATRVADRSLYLIPTAEVPLV 236 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLYS E + LPL T FRSEAGS GRDTRG++R HQF K ELV + E++ Sbjct: 237 NLYSRETLAEDDLPLSLTAHTACFRSEAGSYGRDTRGLIRLHQFAKVELVRLCLLEEAEE 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + + +L AEE L+RL LHYRV+ L GDLGFSA +TYDLEVWL Q +REISS S CG Sbjct: 297 QLQLLLGHAEECLQRLGLHYRVIDLRAGDLGFSARRTYDLEVWLPSQQCFREISSVSDCG 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR R + ++T TLNGSG+ +GR ++A+LE +DGSV IP L PY Sbjct: 357 DFQARRAGIRVKR--GNQKEYTATLNGSGLPIGRTVVALLEQNQRSDGSVEIPPALVPYT 414 Query: 418 NNLAVIKKEHI 428 I + Sbjct: 415 -GFHTINPDGT 424 >gi|328871735|gb|EGG20105.1| seryl-tRNA synthetase [Dictyostelium fasciculatum] Length = 452 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 132/436 (30%), Positives = 220/436 (50%), Gaps = 16/436 (3%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NP+ + + +KR+ + + I+ LD + + + + + Sbjct: 3 LDIVMFRADKGGNPDLIRQSQQKRNKPVEAVQEIIDLDGEVKKAKYATDQANSEYGKINK 62 Query: 57 QIGQAIAEGNL-SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 I G + +D L + L ++ L+K+ ++ L+K + I N+ E VP+ Sbjct: 63 DIAALKKSGETGAKIDELIAANTALDAKIQTLKKQSADLEELLRKKLKPIGNIVHESVPV 122 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 T+ ++N ++R+ G+ + L H + E + D +R +SG R L G L Sbjct: 123 STTEDDNAVVRTWGECKNTPDL-LNHHHLLEMIDGFDMERGASISGHRCYFLKGPGVMLN 181 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIP 230 +A+ + + ++ YT + P +R + M T Q+ +F ++++ + ++LI Sbjct: 182 QAIINYGLAF-LAKRQYTALQTPFFMRKDVMAETAQLEQFDEELYKVSGDGEENEKYLIA 240 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 TSE ++ + E +E K LP R+ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 241 TSEQPISAFHRGEWLEEKDLPKRYAGYSTCFRKEAGSHGRDTWGIFRVHQFEKIEQFVIT 300 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + EDS+ HE+M+ AEE + L L Y+VVS+ + L +A K YDLE W G N YRE+ Sbjct: 301 KPEDSWEMHEQMIKTAEEYYQELGLPYQVVSIVSSALNNAAAKKYDLEGWFPGYNAYREL 360 Query: 351 SSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C ++Q+R + R + + ++ H LN + A R + ILENY G + Sbjct: 361 VSCSNCTDYQARDLEIRCGMKKQGQQQKRYVHMLNSTLAATTRVICCILENYQTE-GGIN 419 Query: 409 IPTVLRPYMNNLAVIK 424 +PTVL+P+M + I Sbjct: 420 VPTVLQPFMGGVTFIP 435 >gi|219685837|ref|ZP_03540645.1| serine--tRNA ligase [Borrelia garinii Far04] gi|219672611|gb|EED29642.1| serine--tRNA ligase [Borrelia garinii Far04] Length = 425 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 143/432 (33%), Positives = 236/432 (54%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR N + + ++K R L + ++ LD+K + +I KI ++ A+RN NS + Sbjct: 1 MLDFKFIRDNLDLVKKSIKARGLVLDIDKLVYLDDKRKKIITKIGELNAKRNENS---SK 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L +L LK+QL LE+E ++ +PN+ +VPIG S Sbjct: 58 MRENLDNVLKSSLMETGKILKKQLIDLEEELKKISFDFDLENKRVPNILSPDVPIGNSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG P ++H E+G L L+DFDRA ++SG++F L LE AL Sbjct: 118 DNFEIKKVGVVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ E G+ P + R+ + G G P+ + + ++L+ TSE++L Sbjct: 178 FSLN-KLREKGFDVFITPDIAREFIVDGIGFNPRGDESNIYKIESTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ +LP++ + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIID-LTLPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESQVI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ LS E+I L++ YRV+++C+ DLG A K YD+E W+ G+ Y E++S S Sbjct: 296 HDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGSYGEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G V IP L Sbjct: 356 CTDYQSRRLKIRYKDQDEQN-KFAHMVNGTAIATTRVIISILENFQDQKGGVRIPKSLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYIPFKN 425 >gi|291319992|ref|YP_003515250.1| seryl tRNA synthetase [Mycoplasma agalactiae] gi|290752321|emb|CBH40292.1| Seryl tRNA synthetase [Mycoplasma agalactiae] Length = 422 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 183/425 (43%), Positives = 260/425 (61%), Gaps = 8/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML I++I N +++ AL+ R+ + + +LS +K + + R+ + S QIG Sbjct: 1 MLSIKFINDNRDYVRKALENRNFDVSVFDTLLSYLDKRGAAMHDAQIKRSELSKLSKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI-GTS 118 + + ++ LK + S LK+ + LEK E ++I IPN+ L+ VP+ Sbjct: 61 SFK--DDKAKMNELKLQASNLKKDVVELEKNADEFDQKAYEIIISIPNISLDSVPVGKDE 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + ++ + H+EIG L + DF+RA KLSG+RF V G + L RAL Sbjct: 119 NDNQVINTHDNLGRKLVSNVLPHYEIGNKLDIFDFERAVKLSGSRFVVFKGAGSKLARAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLT 237 FM+DLHT +GY E S P+LV+ E ++GTGQ+PKF DD+F +LIPT+EV LT Sbjct: 179 QNFMLDLHT-ANGYKEYSVPVLVKPEILFGTGQLPKFKDDLFFMEQTNMYLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY++EII+ P+R T FRSEAGS G+D +G++R HQF K ELV IT E+D Sbjct: 238 NLYNNEIIDLSQ-PVRLTGFTECFRSEAGSGGKDMKGIVRSHQFKKVELVKITSEKDWKF 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ++ML A+ +L+ L+L YR + LCTGDLGFS+ T DLEVWL + YREISS S G Sbjct: 297 EFKQMLEQAKLVLEELELPYRELQLCTGDLGFSSRTTVDLEVWLPSELKYREISSVSYMG 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RYRD ++ +KF HT+NGSG+A+ R + AILENY NADG+V+IP L PY Sbjct: 357 DFQARRAMIRYRD-DNNEVKFAHTMNGSGLAIDRLIAAILENYQNADGTVSIPKKLIPYF 415 Query: 418 NNLAV 422 + + Sbjct: 416 GSDKI 420 >gi|213410144|ref|XP_002175842.1| seryl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] gi|212003889|gb|EEB09549.1| seryl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] Length = 451 Score = 334 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 130/438 (29%), Positives = 215/438 (49%), Gaps = 18/438 (4%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + NPE + + +KR + + ++ + ++ + +++++ N+ Sbjct: 1 MLDINLFQVEKGGNPELIRESQRKRGADVTVVDKVIEMYKEWVGIRFELDNVNKTTNALQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG+ + L E + L Q LE +E S+ L++ + N+ E VP+ Sbjct: 61 KDIGKKMKA--KEDASELLAEKAKLAAQKKELEDKETAKYKSMMSLVNTVGNIVHESVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 N LIR + + H E+ L D +R K+SG R L + Sbjct: 119 SMDEENNELIRQWAPEGVKVEKRDCLSHHEVLTRLDGYDPERGAKISGHRGYFLRQYGVF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIP 230 L AL Q+ ++ T + GYT + AP +V + M T Q+ +F ++++ + R+L Sbjct: 179 LNLALIQYGLEFLT-KRGYTALQAPTMVNKDVMAKTAQLSQFDEELYKVVDGDEERYLAA 237 Query: 231 TSEVSLTNLYSHEIIESK--SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 TSE ++ +S+E E LP+++ + +R EAGS GRD G+ R H F K E Sbjct: 238 TSEQPISAFHSNEWFEQPAEQLPIKYAGFSTCYRREAGSHGRDAWGIFRVHAFEKIEQFL 297 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 +T E S+ + M+ AEE K L+L YRVV++ +G+L +A K YDLE W Q Y+ Sbjct: 298 LTEPEKSWEAFDEMIGHAEEFYKSLELPYRVVAIVSGELNNAAAKKYDLEAWFPYQGEYK 357 Query: 349 EISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 E+ SCS C ++QSR + R + ++ K+ H LN + A R + ILENY +G Sbjct: 358 ELVSCSNCTDYQSRNLEIRCGVKKMGAREKKYVHCLNSTLCATERAICCILENYQTPEG- 416 Query: 407 VTIPTVLRPYMNNLAVIK 424 + +P VL+PYM + Sbjct: 417 LNVPKVLQPYMGGKTFLP 434 >gi|308234212|ref|ZP_07664949.1| seryl-tRNA synthetase [Atopobium vaginae DSM 15829] Length = 396 Score = 334 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 175/382 (45%), Positives = 246/382 (64%), Gaps = 4/382 (1%) Query: 14 LDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 +D + R + E LDE R I ++E ++A RNS S QIG+ + EG A Sbjct: 2 VDKSCASRQNAHWDREQFFELDELRRSTIVEVERLQAERNSASKQIGKLMQEGKKDEAQA 61 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 K + + K ++ LE++ L L+S IPN+P E VP G +EN +R G Sbjct: 62 AKEQVAAGKARIAELEEQRASAEKQLHDLVSAIPNIPHESVPYGKDDSENKEVRKWGTPR 121 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 S +R H+++G ++DFDR KL+G+RF VL G+ A +ERAL F ID+H +E G+ Sbjct: 122 SFDFDARAHWDLGTQTHMIDFDRGVKLAGSRFYVLGGYGAQMERALINFFIDMH-NEAGF 180 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 E P+L ++++GTGQ+PKF +D+F ++ +LIPT+EV LTNL+ E++++ LPL Sbjct: 181 KEWWPPVLTNYDSLFGTGQLPKFDEDLFHVSNDLYLIPTAEVMLTNLHRDEVLDASQLPL 240 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 ++T P FR EAGSAGRDTRG++R H+F K E+V + EDS + E M++ AE+ L+ Sbjct: 241 KYTAFTPCFREEAGSAGRDTRGIIRVHEFDKVEMVKFAKPEDSMNQLESMVAEAEKCLQV 300 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 L L YRVVSLCTGD+GFSACK YDLEVWL N Y+EISSCS C +FQ+RR N +YRDP+ Sbjct: 301 LGLAYRVVSLCTGDIGFSACKCYDLEVWLPSYNNYKEISSCSNCWDFQARRANIKYRDPS 360 Query: 373 S-KSLKFTHTLNGSGVAVGRCL 393 K ++ HTLNGSG+A GR + Sbjct: 361 EFKGTRYVHTLNGSGLA-GRKM 381 >gi|309808556|ref|ZP_07702453.1| serine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] gi|308168206|gb|EFO70327.1| serine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] Length = 384 Score = 334 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 162/374 (43%), Positives = 227/374 (60%), Gaps = 10/374 (2%) Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + N D E + +++ L+ E E+ K ++ +PN P + PIG + Sbjct: 8 LKQKKNKENADDAIKEMREVGQEIKALDVEVSELTEKQKYILLRLPNFPDDSDPIGPDDS 67 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N +R + + H+++G L ++D+D A K+SGARF G A LERA+ Sbjct: 68 YNEEVRKWNEPTKFTFEPKAHWDLGTDLNILDWDAAAKVSGARFVYYKGAGALLERAVFN 127 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPTS 232 F +D + + GYTEV P LV ++M GTGQ PKF +D++ LIPT+ Sbjct: 128 FFLDENV-KAGYTEVIPPYLVNYDSMQGTGQFPKFTEDVYTIVDNDDPDKPRELTLIPTA 186 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV L N + +I++ K LP+ T ++P+FRSEAGSAGRDTRG++R H+F K E+V I E Sbjct: 187 EVPLVNYFRDKILDIKQLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKICDE 246 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 + S+ E +++ AE +L++L+L Y VV+L TGD F++ KTYDLEVW+ QN YREISS Sbjct: 247 DSSWQELDKLTKNAEHLLQKLELPYHVVALSTGDASFTSAKTYDLEVWMPAQNQYREISS 306 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CS C +FQ+RR RYRD K L HTLNGSG+AVGR + AILENY N DG+V +P Sbjct: 307 CSNCTDFQARRSLIRYRDEAGK-LHLAHTLNGSGLAVGRTVAAILENYQNEDGTVNVPEA 365 Query: 413 LRPYMNNLAVIKKE 426 L PYM+ + VIK E Sbjct: 366 LVPYMHGMTVIKPE 379 >gi|224438519|ref|ZP_03659439.1| seryl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313144946|ref|ZP_07807139.1| seryl-tRNA synthetase synthetase [Helicobacter cinaedi CCUG 18818] gi|313129977|gb|EFR47594.1| seryl-tRNA synthetase synthetase [Helicobacter cinaedi CCUG 18818] Length = 425 Score = 334 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 172/428 (40%), Positives = 244/428 (57%), Gaps = 14/428 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D + + + + + L + + + + L + +++E ++A +N S ++G Sbjct: 1 MIDTKALINDFDRVSELLCIKKVSEDTLKALKDLAIAYKSTKQELESLQAFQNKGSQKLG 60 Query: 60 QAIAE-GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G L+D LK++ K+++ +E + + L+ L IPN+P P G Sbjct: 61 LWFRSDGCQDLIDDLKSQLDENKKKMNNVESRLKTIEAELENLAYTIPNLPDSATPKGED 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++NI ++ V + +EH+E+G G +DF+ KL+ +RFSVL G A L RAL Sbjct: 121 ESDNIELKKVLEPRIFDFTPKEHWELGVDNGWIDFESGVKLAKSRFSVLRGMGAKLNRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLI 229 FM+D + G+ V P++ ++GTGQ+PKF +DMF +LI Sbjct: 181 INFMLDYN-ERQGFESVVTPVIANARTLFGTGQLPKFENDMFKVDSHFDEEGSEHDLYLI 239 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 TSE++LTNLY II S++LP+ T+ P FR EAGSAGRDTRGM+RQHQF K ELV+I Sbjct: 240 STSEITLTNLYQDSIIPSENLPIMLTSHTPCFRKEAGSAGRDTRGMIRQHQFDKVELVAI 299 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T S E+ML A IL L L +R + LC GDLGFSA T D+EVWL GQN YRE Sbjct: 300 THPSQSEAMQEKMLKTASGILSELGLPHRFMRLCGGDLGFSASNTIDIEVWLPGQNCYRE 359 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISS S +FQ+RR RY+ + HTLNGS +AVGR LIAI+ENY ADGS+ I Sbjct: 360 ISSISNTRDFQARRAKIRYK--ENGKNALVHTLNGSSLAVGRTLIAIMENYQRADGSIEI 417 Query: 410 PTVLRPYM 417 P VL Y+ Sbjct: 418 PKVLEKYL 425 >gi|328768059|gb|EGF78106.1| hypothetical protein BATDEDRAFT_90762 [Batrachochytrium dendrobatidis JAM81] Length = 472 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 131/457 (28%), Positives = 205/457 (44%), Gaps = 35/457 (7%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNS 53 M+DI +R NPE + + +KR + + +L+LD++ + + +++ + N Sbjct: 1 MIDINLLRADKGGNPELIRESQRKRGGDAAALLVDQVLTLDDEWKKARFQADELNKKINQ 60 Query: 54 NSAQIGQAIAEGNLS--LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 I L LK + L + L + + L+ + I N E Sbjct: 61 IGKDIAPLAKAKKLDSPEALKLKQDKEDLLKLKQDLTELSVQKEKLLQSKLRLIGNTVHE 120 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSRE-----------------HFEIGEALGLMDFD 154 V + +N++I K + H E+ E +G D Sbjct: 121 SVIVSNDEKDNLVIEKWWPKDRTEAAEVDRRAQLIKDGKGVSGLYSHHEVLEKIGGYDPV 180 Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 R T ++G R LTG L AL + +D + GYT++ P ++ E M T Q+ Sbjct: 181 RGTNVAGHRGYFLTGPGVDLNLALMHYGLDF-LEKRGYTKLWTPFFMKREVMAKTAQLED 239 Query: 215 FADDMFCTT----DGRWLIPTSEVSLTNLYSHEIIESKS-LPLRFTTLAPSFRSEAGSAG 269 F + ++ D +++I TSE ++ +S E LP ++ + FR EAG+ G Sbjct: 240 FDEALYSVEGEAGDAKYMIATSEQPISAFHSGEWFSEADELPKKYAGSSTCFRKEAGAHG 299 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 RDT G+ R HQF K E +T E S+ HE M+ A+E K L L Y V+S+ +G L Sbjct: 300 RDTWGIFRVHQFEKVEQFVLTHPEKSWEMHEEMIEVAKEFYKSLGLPYHVISIVSGALNN 359 Query: 330 SACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGV 387 SA K YDLE W Q Y+E+ SCS C ++QSR + R+ + N S K+ H LN + Sbjct: 360 SAAKKYDLEAWFPFQGTYKELVSCSNCTDYQSRELEIRFGTKKANDVSKKYVHALNCTLT 419 Query: 388 AVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 A R + ILEN+ G V +P LR YM + Sbjct: 420 ATERTICCILENFQTETG-VVVPEPLRNYMGGKDFLP 455 >gi|301117600|ref|XP_002906528.1| seryl-tRNA synthetase [Phytophthora infestans T30-4] gi|262107877|gb|EEY65929.1| seryl-tRNA synthetase [Phytophthora infestans T30-4] Length = 454 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 136/432 (31%), Positives = 209/432 (48%), Gaps = 14/432 (3%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +DI +R +P+ + KKR L+ ++ LDE+ R ++E I + N+ Sbjct: 3 IDINRLRPERGGDPDAVRAEQKKRSLDVDIVNKVIELDEQWRKKQGEVETISMKMNALQQ 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I + AL +E L LP +KE + + K + I N VPI Sbjct: 63 EIKKLSKA--KEDFKALSDERKELAASLPEKKKEADALKELVDKELPKIGNTVDPTVPIS 120 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + ++N+++++ G P H E+ + + +R +++G R LTG+ LE+ Sbjct: 121 NNEDDNVVVKTWG-SPIQKDGLHFHHEVLHRIDGYEPERGVQVAGHRAYFLTGYGFLLEQ 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEV 234 AL + + Y + P + E M Q+ F + ++ D ++LI TSE Sbjct: 180 ALMAYATAF-LMKAQYKMLKPPFFMNKEGMAAVAQLDDFDEQLYKVIGEDEKYLIATSEQ 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 + + E I SLPLR+ + FR EAGS G+DT G+ R HQF K E IT E Sbjct: 239 PICGYHKGEWITESSLPLRYGGFSTCFRKEAGSHGKDTWGIFRVHQFDKMEQFCITDPES 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S HE ML AEE + L+L YRVV++ +G+L +A K YDLE W YRE+ S S Sbjct: 299 SAAMHEEMLRHAEEFYQSLNLPYRVVNIVSGELNNAAVKKYDLEAWFPAYKEYRELVSAS 358 Query: 355 TCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 C +FQSR M R + N + K+ H LN + A R + ILEN+ + +G V +P V Sbjct: 359 NCTDFQSRAMEIRCGVKKENQREKKYVHMLNSTLCASTRTVCCILENFQDENG-VKVPEV 417 Query: 413 LRPYMNNLAVIK 424 L P+M + Sbjct: 418 LVPFMGGATYLP 429 >gi|255969566|gb|ACU45412.1| seryl-tRNA synthetase [Peanut witches'-broom phytoplasma] Length = 429 Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 162/429 (37%), Positives = 250/429 (58%), Gaps = 9/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI++I +N E + LK R + + ++ L + +++KIE I+ +N S Q Sbjct: 1 MLDIKFILKNIELVKNKLKNRFVNEDLLDELIFLYQSKNKILQKIERIKYFKNQFSRQ-- 58 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI-GTS 118 + S ++ N+ E L L+ ++ + ++ +PN+ E VPI Sbjct: 59 KIDKLSIQSNSKSIINDDINHDENLKKLQINLKKIEEQMTNILYFLPNIHHESVPIGYNE 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++ + RSV + + ++H ++G L ++DF +A+K+ G++F VL G A LER+L Sbjct: 119 SDNIEVYRSVVEPRKYDFVIKDHLQLGVDLDILDFQKASKIVGSKFVVLKGLGARLERSL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVS 235 FMID H + Y+EV P +V ++M+ TGQ+PKF+ D+F +L PT+EV Sbjct: 179 INFMIDTHV-SNKYSEVIPPFIVNQQSMFATGQLPKFSQDVFKLNLDKYNWYLNPTAEVP 237 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 NL+ EI++ KSLP+++ + FR EAGS+G++T+G+ RQ QF K EL+ + S Sbjct: 238 TINLHRQEILDIKSLPIKYVSYTTCFREEAGSSGKNTKGIWRQKQFNKVELIQFVEPKTS 297 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E+ML A IL +L L YR++ L TGDLGFS KTYD+EVWL Q Y EI+S S Sbjct: 298 YIVLEQMLKDAAVILDKLKLPYRIMLLSTGDLGFSMSKTYDIEVWLPSQQKYCEIASISN 357 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQ+RR N +++ K HTLNGS +AVGR + AILENY N DGSV++P +L+ Sbjct: 358 AEDFQARRANIKFKAHLQDQGKLVHTLNGSALAVGRTMAAILENYQNKDGSVSVPKILQE 417 Query: 416 YMNNLAVIK 424 Y+ +IK Sbjct: 418 YL-GTDIIK 425 >gi|224534318|ref|ZP_03674896.1| serine--tRNA ligase [Borrelia spielmanii A14S] gi|224514420|gb|EEF84736.1| serine--tRNA ligase [Borrelia spielmanii A14S] Length = 425 Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 144/432 (33%), Positives = 236/432 (54%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + ++K R L + ++ LD+K + +I KI ++ A+RN NS ++ + Sbjct: 1 MLDLKFIRDNLDLVKSSIKARGLVLDIDKLIYLDDKRKKIITKISELNAKRNENSYKMRE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L ++L LK+QL LEKE + +PN+ +VPIG S Sbjct: 61 ---NLDKVLKNSLIEGGKILKKQLIDLEKELERISIDFDLENKRVPNILSPDVPIGNSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG ++H E+G L L+DFDRA ++SG++F L LE AL Sbjct: 118 DNFEIKKVGVVSKFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ E G+ P + R+ + G G P+ + ++L+ TSE++L Sbjct: 178 FSLN-KLREKGFNVFITPDVAREFIVDGIGFNPRGDESNIYKIEDTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ S P++ + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIIDLTS-PIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESSVI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ LS E+I L++ YRV+++C+ DLG A K YD+E W+ G+ Y EI+S S Sbjct: 296 HDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGAYGEITSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G V IP L Sbjct: 356 CTDYQSRRLKIRYKDQDGQN-KFAHMVNGTAIATTRVIISILENFQDEKGGVRIPKSLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYIPFKN 425 >gi|298245208|ref|ZP_06969014.1| seryl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] gi|297552689|gb|EFH86554.1| seryl-tRNA synthetase [Ktedonobacter racemifer DSM 44963] Length = 420 Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 163/419 (38%), Positives = 240/419 (57%), Gaps = 9/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+ + +I Q+P+ + AL++R + IL L E+ R LI + + + ++ Sbjct: 1 MMSLDFICQHPQVVREALERRRESYNIDEILRLAEQRRGLITRTDGLYTTLKGVREEV-- 58 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L + + ++ LE + + + L+ LI +PN+P + Sbjct: 59 --RNTSGEKRAGLNKQIKAIMREIRQLELQVSDADTRLRLLIQTLPNLP----QHAVRDD 112 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ +R G+ + H+E+GE LG++D A +++G+RF L G+ A LERAL Sbjct: 113 TDVELRRWGESAAFQFQPLAHWELGERLGILDPTSAAQVAGSRFMTLRGYGARLERALLS 172 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239 FM+DLHT E Y EV P L + M G GQ+PKF + + CT D +L PT+EV+L + Sbjct: 173 FMLDLHTCEAEYIEVIPPFLAKRSVMLGAGQLPKFEEQAYACTMDELYLNPTAEVALVGM 232 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ I+ + LPLR+ +FR EAGSA R RG+LR HQF K EL T E S++ H Sbjct: 233 HTDSILMREELPLRYAAWTTAFRREAGSASRYQRGLLRLHQFNKVELFQFTTPEQSYSAH 292 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E+ML AE++L+ L+L YRVV LC +L F+A +++DLEVWL Y E+SS S C +F Sbjct: 293 EQMLLHAEQVLRLLELPYRVVELCALNLPFAASRSFDLEVWLPSLQDYIEVSSISNCESF 352 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+ R N +YR N ++ HTLNGSG+AVGR + AILE ADGSV IP VLRPYM Sbjct: 353 QAIRANIKYRPQNGTRAEYVHTLNGSGLAVGRTMAAILELNQQADGSVVIPKVLRPYMG 411 >gi|15639634|ref|NP_219084.1| seryl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Nichols] gi|189025872|ref|YP_001933644.1| seryl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|6094414|sp|O83653|SYS_TREPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|238689335|sp|B2S3N6|SYS_TREPS RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|3322945|gb|AAC65620.1| seryl-tRNA synthetase (serS) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018447|gb|ACD71065.1| seryl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|291060016|gb|ADD72751.1| seryl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Chicago] Length = 426 Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 135/431 (31%), Positives = 228/431 (52%), Gaps = 12/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++IR+N + + +K R++ + I+ L ++ L+ ++++++ RN N Q Sbjct: 1 MLDYRFIRENVDAVKENVKVRNVHADVDAIVHLYDQRVKLLAELQELQRARNEN----AQ 56 Query: 61 AIAEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +L + ET LK+++ E+ ++ L +PN+ P G S Sbjct: 57 TMKSSLDALARSACVETGRALKDRIAHSERLLVQISDQLLSATQALPNMTHMCTPHGRSD 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++N+ I+ G P R+H E+ L ++DF+ K+SG +F L LE+AL Sbjct: 117 SDNLEIKRCGVPPCFSFSPRDHVELARLLDIVDFEAGKKVSGIKFYYLKREGVLLEQALI 176 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLT 237 F + E G+ P + R+ + G G P+ + + R L+ T+E++L Sbjct: 177 MFGLQF-LQERGFVPFLTPDIAREGMVCGLGFNPRGSGSNIYRIEGEHRCLVATAEITLG 235 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 ++ E++E +SLP + L+ FR EAG+AG+ +RG+ R HQF K E+ + DS Sbjct: 236 AYHAGEVLEERSLPRLYAGLSHCFRKEAGAAGQFSRGLYRVHQFTKLEMFAYCTPSDSEC 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ--NLYREISSCST 355 HER+ S EEI L++ +RVV +C GDLG A + +DLE W+ G+ + E++S S Sbjct: 296 LHERLRSLEEEIFTALEIPFRVVEVCAGDLGAPAYRKWDLEAWMPGRQGGSWGEVTSASN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++Q+RR+N RY+D K + H LNG+ +A+ R LIA+LEN +A+G V IP L P Sbjct: 356 CTDYQARRLNVRYKDAEGKK-HYVHMLNGTALAISRVLIALLENGQDAEGRVRIPQALVP 414 Query: 416 YMNNLAVIKKE 426 + + Sbjct: 415 FC-GFEYLYPR 424 >gi|120406601|ref|YP_956430.1| seryl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] gi|166222752|sp|A1TGX4|SYS_MYCVP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|119959419|gb|ABM16424.1| seryl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] Length = 419 Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats. Identities = 155/429 (36%), Positives = 240/429 (55%), Gaps = 12/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + R +P + + D R I +++RA + S S +G Sbjct: 1 MIDLKVLRENPDAVRASQLARGEDPGLVDALADADTARRAAISAADNLRAEQKSASRLVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A E +L+ A L +++ E + E + I NV ++ VP G Sbjct: 61 KASPEERPALLAA----AKELADKVRAAESAQAEAEKAYSAAHMAISNVIIDGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L +P+A+ ++H E+GE+LGL+D +R K+SG+RF LTG A L+ L Sbjct: 117 DFVVLDT--VGEPTALTDPKDHLELGESLGLIDMERGAKVSGSRFYFLTGFGALLQLGLF 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 Q + T E+G+T V P+LVR E M GTG + AD+++ D +L+ TSEV L Sbjct: 175 QLAVRTAT-ENGFTLVIPPVLVRPEIMSGTGFLGAHADEVYRVEADDLYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ P R+ + FR EAGS G+DTRG++R HQF K E R E++ E Sbjct: 234 YHSGEILDLSEGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEEAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L ++L +++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HDRLLGWQRQMLGLIEVPYRVIDIAAGDLGSSAARKFDCEAWVPTQQTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD N K + TLNG+ +A R L+AILEN+ DGSV IP L PY+ Sbjct: 354 FQARRLGVRYRDENGK-PQTAATLNGT-LATTRWLVAILENHQQPDGSVRIPEALVPYV- 410 Query: 419 NLAVIKKEH 427 V+ ++ Sbjct: 411 GTEVLTPKN 419 >gi|226321201|ref|ZP_03796738.1| seryl-tRNA synthetase [Borrelia burgdorferi 29805] gi|226233398|gb|EEH32142.1| seryl-tRNA synthetase [Borrelia burgdorferi 29805] Length = 425 Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats. Identities = 143/432 (33%), Positives = 237/432 (54%), Gaps = 12/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N + + ++K R L + ++ LD+K + LI I ++ A+RN NS ++ + Sbjct: 1 MLDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKLITIIGELNAKRNENSYKMQE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L +L LK+QL LE+E V +PN+ +VPIG+S Sbjct: 61 ---NLDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNILSPDVPIGSSEE 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N I+ VG P ++H E+G L L+DFDRA ++SG++F L LE AL Sbjct: 118 DNFEIKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ + G+ P + R+ + G G P+ + ++L+ TSE++L Sbjct: 178 FSLN-KLRDKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y ++II+ +LP+R + FR EAG+ G+ ++G+ R HQF K E+ + E+S Sbjct: 237 YYYNKIID-LTLPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H+ LS E+I L++ YR++++C+ DLG A K YD+E W+ G+ Y E++S S Sbjct: 296 HDEFLSIQEQIFTELEIPYRILNICSFDLGSPAYKKYDIEAWMPGRDGKGGYGEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D + ++ KF H +NG+ +A R +I+ILEN+ + G V IP L Sbjct: 356 CTDYQSRRLKIRYKDQDGQN-KFAHMVNGTAIATTRVIISILENFQDQKGGVRIPKSLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYIPFKN 425 >gi|226355386|ref|YP_002785126.1| seryl-tRNA synthetase [Deinococcus deserti VCD115] gi|226317376|gb|ACO45372.1| putative serine--tRNA ligase (Seryl-tRNA synthetase) [Deinococcus deserti VCD115] Length = 425 Score = 332 bits (851), Expect = 7e-89, Method: Composition-based stats. Identities = 146/426 (34%), Positives = 235/426 (55%), Gaps = 9/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR+N + A++ + + + +L+LD + +++E ++A RN+N+ + + Sbjct: 1 MLDLRFIRENAGVVRRAIEVKGVNLDLDELLALDRELTAQKQRVEAMQAERNANAKLVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + AL + L ++L E L++L+ +PN+P VP+G Sbjct: 61 A----TPAERPALIQKGKDLGDELKAQEPALRAQEEQLRQLLLRVPNIPHPGVPVGKDDT 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R G+ P +H E+ E G D +R ++SG+R +L G LE A+ Sbjct: 117 DNVELRREGQVPVFSTPPLDHVELLEKQGWSDPERVARVSGSRSYLLKGEAVMLEMAVLT 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 F +D S G+T +S L R E G+G P D ++ D L T+EV + +L Sbjct: 177 FALDF-LSARGFTPLSTTALARPETFVGSGHFPGGEDQVYKIDGDELMLAGTAEVPVNSL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF--T 297 Y+ E + +LP+ + ++ +FRSEAGSAGRD RG++R H+F K E + R +++ Sbjct: 236 YAGEQLPLDALPVTYAAISAAFRSEAGSAGRDVRGLIRVHEFRKVEQYVMCRADEAEALQ 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E +L+ AE +L+ L+L YRVV CTGD+G YD+E W+ + YRE SCS G Sbjct: 296 WFETLLANAEGLLQALELPYRVVQNCTGDMGAGKVLMYDIETWVPSEEKYRETHSCSYLG 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR RYRD + L + HTLN +G+A R L+ +LEN+ ADG + IP LRPY+ Sbjct: 356 DWQARRTGLRYRDEEGR-LVYAHTLNNTGIAAPRILVPLLENHQLADGRIRIPQALRPYL 414 Query: 418 NNLAVI 423 VI Sbjct: 415 GGKEVI 420 >gi|302771363|ref|XP_002969100.1| hypothetical protein SELMODRAFT_231245 [Selaginella moellendorffii] gi|300163605|gb|EFJ30216.1| hypothetical protein SELMODRAFT_231245 [Selaginella moellendorffii] Length = 419 Score = 332 bits (851), Expect = 7e-89, Method: Composition-based stats. Identities = 117/426 (27%), Positives = 204/426 (47%), Gaps = 12/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R +P + + ++R E + ++ LD + R +E A N +I Sbjct: 1 MLDIKLLRDDPALVKESQRRRFQPESDVDDVIDLDRQWRAAQFNLEKKSAEINKIEKEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + S L E L+ + L+ ++ L + + N+ + VP+ ++ Sbjct: 61 KLLRTNGDS--ANLLAEKGALENEHTELKLRASKLKLELDSKLKSLGNLVHDSVPVSSNE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +++ G H + + L +D +R ++G R L L AL Sbjct: 119 KDKVVVTKWGVPRQDQEALENHVSLCKKLDAVDVERGAAVAGHRGYYLLDPGFELNMALV 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 F + + GY ++ P L+ M Q+ +F ++++ +G++LI TSE +L Sbjct: 179 NFGLKF-LKDRGYRKIQTPTLMDKAVMKCCAQLSQFDEELYELAGEGKYLIATSEQALCG 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + +SLPLR+ + FR EAGS G+DT G+ R H+F K E +T E S+ Sbjct: 238 YLKDNNVAPESLPLRYAGYSSCFRKEAGSHGKDTLGIFRVHEFQKVEQFCVTSPETSWDM 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M+ +E+ ++L L Y+VV++ +G+L +A K YDLE W Y E+ SCS C + Sbjct: 298 LEEMIKTSEDFYQQLGLPYQVVNVVSGELNDAAAKKYDLEAWFPAAGKYEELVSCSNCTD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+R +N + K H LN + VA R + I+ENY +G V +P VL+P+M+ Sbjct: 358 YQARSLNIK------SGKKLVHLLNCTLVATQRTMCCIVENYQTRNG-VRVPEVLQPFMD 410 Query: 419 NLAVIK 424 + Sbjct: 411 GTTFLP 416 >gi|284042611|ref|YP_003392951.1| seryl-tRNA synthetase [Conexibacter woesei DSM 14684] gi|283946832|gb|ADB49576.1| seryl-tRNA synthetase [Conexibacter woesei DSM 14684] Length = 411 Score = 332 bits (851), Expect = 7e-89, Method: Composition-based stats. Identities = 150/417 (35%), Positives = 227/417 (54%), Gaps = 21/417 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD++ IR+ P+ + AL +R + +L+LDE+ R ++E+I+A +N S Sbjct: 1 MLDLRLIRREPDAVRAALARRGDVAADAIDRLLALDERWREQTVQLEEIQAEQNQLSRGR 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 A + + L L + +++E L P+ + Sbjct: 61 RGAPTPEEHAAMSELAARGRALSDAQTAVKRE------------LDELLATLPNTPLDDA 108 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 A ++ ++R+VG E A +D +R +LSG+RF+ L G L LE AL Sbjct: 109 APQDTVVRTVGDATKTGKDHLE-----LAGERIDMERGARLSGSRFAYLRGDLVMLELAL 163 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 ++ ++ G+ V P+LVR++A++GTG +P ++ D +L TSEV+L Sbjct: 164 VRYAME-KLRGEGFEPVIPPVLVREQALFGTGMLPDTEQQIYHLPEDDLYLAGTSEVALA 222 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +L+ EI+ + LP R+ +P FR EAG+AGRDTRG+ R HQF K E+ + E S Sbjct: 223 SLHQGEILAEEELPRRYAGFSPCFRREAGAAGRDTRGIFRVHQFDKVEMFAFVTPEQSAA 282 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EHER+L E IL+ L++ YRVV++ DLG SA K YD E WL GQ YRE++S S Sbjct: 283 EHERILGIEESILQELEIPYRVVNIAVDDLGASAAKKYDNEAWLPGQGRYRELTSASNTT 342 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQ+RR++ RYR ++K HTLNG+ VAVGR +IA+LEN DGS+ +P VL Sbjct: 343 DFQARRLDIRYRPTDAKKPVTLHTLNGTAVAVGRTIIALLENGQQDDGSIALPRVLV 399 >gi|302339395|ref|YP_003804601.1| seryl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301636580|gb|ADK82007.1| seryl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 434 Score = 332 bits (851), Expect = 8e-89, Method: Composition-based stats. Identities = 136/431 (31%), Positives = 236/431 (54%), Gaps = 11/431 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML++++++++ + + RH++ + + L +K L++ +E+ R RN N+ Sbjct: 1 MLEMKFVKEHLAEVQQNIINRHMKVDAAEAVRLYDKRNELLRSVEEKRRARNENAR---A 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + L + LK + LEK E ++L+ S IPN+ + P+G Sbjct: 58 MKGKLSQEERTKLIEDGKELKRSIAELEKNLEETETALQGYTSAIPNMAHPDAPVGKEDK 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I+ G P S++H E+G AL ++DF+ A++++G +F L LE AL + Sbjct: 118 DNLEIKRWGTVPHFDFPSKDHVELGSALDIVDFETASRVTGQKFYYLRNEGVFLELALVR 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTN 238 + +D+ T + G+T P L R+E + G G P+ + T G L+ T+E++L Sbjct: 178 YALDILT-KRGFTPTITPDLAREEIVEGIGFNPRGEESNIYTLEGTGTCLVGTAEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ E+I+ + LP++ L+ FR EAG+AG+ ++G+ R HQF K E+ E+S Sbjct: 237 YHAGELIDGQRLPIKLAGLSHCFRREAGAAGQFSKGLYRVHQFTKVEMFVYCTPEESEAM 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H +L+ EEI + L++ YR+V CTGDLG A + +D+E W+ G+ + E++S S Sbjct: 297 HHSLLAIEEEIFQGLEIPYRIVDTCTGDLGAPAYRKFDIEAWMPGRGDGGEWGEVTSTSN 356 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ R + + ++ H LNG+ +AV R +IAILEN+ DGSV IP L P Sbjct: 357 CTDYQSRRLGVRMKTESGN--RYLHMLNGTAIAVSRGIIAILENFQQKDGSVRIPEKLVP 414 Query: 416 YMNNLAVIKKE 426 Y + +E Sbjct: 415 YTGFSEIKARE 425 >gi|148377324|ref|YP_001256200.1| seryl-tRNA synthetase [Mycoplasma agalactiae PG2] gi|238686658|sp|A5IXJ4|SYS_MYCAP RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|148291370|emb|CAL58753.1| Seryl tRNA synthetase [Mycoplasma agalactiae PG2] Length = 422 Score = 332 bits (850), Expect = 9e-89, Method: Composition-based stats. Identities = 184/425 (43%), Positives = 261/425 (61%), Gaps = 8/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML I++I N +++ AL+ R+ + + +LS +K + + R+ + S QIG Sbjct: 1 MLSIKFINDNRDYVRKALENRNFDVSVFDTLLSYLDKRGAAMHDAQIKRSELSKLSRQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI-GTS 118 + + ++ LK + + LK+ + LEK E ++I IPN+ L+ VP+ Sbjct: 61 SFK--DDKAKMNELKLQAANLKKDVVELEKNADEFDQKAYEIIISIPNISLDSVPVGKDE 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + ++ + H+EIG L + DF+RA KLSG+RF V G A L RAL Sbjct: 119 NDNQVINTHDNLGRKLVSNVLPHYEIGNKLDIFDFERAVKLSGSRFVVFKGAGAKLARAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLT 237 FM+DLHT +GY E S P+LV+ E ++GTGQ+PKF DD+F +LIPT+EV LT Sbjct: 179 QNFMLDLHT-ANGYKEYSVPVLVKPEILFGTGQLPKFKDDLFFMEQTNMYLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY++EII+ P+R T FRSEAGS G+D +G++R HQF K ELV IT EED Sbjct: 238 NLYNNEIIDLSQ-PVRLTGFTECFRSEAGSGGKDMKGIIRSHQFKKVELVKITSEEDWEF 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E ++ML A+ +L+ L+L YR + LCTGDLGFS+ T DLEVWL + YREISS S G Sbjct: 297 EFKQMLEQAKLVLEELELPYRELQLCTGDLGFSSRTTVDLEVWLPSELKYREISSVSYMG 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RYRD ++ +KFTHT+NGSG+A+ R + AILENY N+DG+V+IP L PY Sbjct: 357 DFQARRAMIRYRD-DNNEVKFTHTMNGSGLAIDRLIAAILENYQNSDGTVSIPKKLIPYF 415 Query: 418 NNLAV 422 + + Sbjct: 416 GSDKI 420 >gi|119953022|ref|YP_945231.1| seryl-tRNA synthetase [Borrelia turicatae 91E135] gi|119861793|gb|AAX17561.1| seryl-tRNA synthetase [Borrelia turicatae 91E135] Length = 425 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 147/432 (34%), Positives = 234/432 (54%), Gaps = 13/432 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N E + +K R LE + ++SLD++ + L+ KI ++ A RN N+ Sbjct: 2 MLDLKFIRDNLELIQKNIKDRGLELDIDLLISLDDERKKLVTKIGELNAIRNENA---NA 58 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + S + LK ++ ILE++ + S L IPN+ +VP+G + Sbjct: 59 MKGKIDDSRRHSFIETGKVLKSEIAILEEKLSHITSKLLIEHKRIPNISAPDVPVGEGED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 NI+++ G P+ ++H EIG L L DF+RA ++SG +F L LE AL Sbjct: 119 GNIVLKVSGSIPNFDFKPKDHLEIGIDLDLFDFERAREVSGNKFYYLKNEAVFLELALIN 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ G+ P + R+ + G G P+ + ++LI T+E++L Sbjct: 179 FALN-KLKPKGFDLFITPDIAREFIVDGIGFNPRGTESNIYKIEDTDKYLIGTAEITLGG 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y + I++ KS PL+ L+ FR EAG+AG+ ++G+ R HQF K E+ + + EDS Sbjct: 238 YYYNTILDLKS-PLKMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCLCKSEDSDRI 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H L+ EEI L++ YRV+++C+ DLG SA K YD+E W+ G+ Y E++S S Sbjct: 297 HNEFLALEEEIFTELEIPYRVLNVCSFDLGASAYKKYDIEAWMPGRGDKGEYGEVTSTSN 356 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D KF H +NG+ +A R +IAILEN+ +A G V IP L Sbjct: 357 CTDYQSRRLKIRYKD--DGQSKFVHMINGTALASTRTIIAILENFQDARGGVRIPKNLVK 414 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 415 YT-GFDYISPKN 425 >gi|313678192|ref|YP_004055932.1| serine--tRNA ligase [Mycoplasma bovis PG45] gi|312950294|gb|ADR24889.1| serine--tRNA ligase [Mycoplasma bovis PG45] Length = 422 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 180/425 (42%), Positives = 262/425 (61%), Gaps = 8/425 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML I++I N +++ AL+ R+ + + +LS +K + + + RA + S QIG Sbjct: 1 MLSIKFINDNRDYVRKALENRNFDLSVFDTLLSHIDKRGAAMYEAQQKRAELSKLSKQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI-GTS 118 + + LK++ S LK+ + LEK + + +++ +PN+ L+ VP+ Sbjct: 61 AFK--NDKQKMQELKDKASQLKKDVVDLEKVADDFDKNAYEILIRVPNISLDSVPVGKDE 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + +++ + H+EIG+ L + DF+RA KLSG+RF + A L RAL Sbjct: 119 NDNHVIQTYDSLGRKLVSNVLPHYEIGKKLDIFDFERAVKLSGSRFVIFKKDGAKLARAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSLT 237 FMIDLHT +GY E + P+LV+ E ++GTGQ+PKF DD+ + +LIPT+EV LT Sbjct: 179 RNFMIDLHT-ANGYEEYAVPVLVKPEILFGTGQLPKFKDDLFYMEQTNMYLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY+ EII + P+R T FRSE GS G+D RG++R HQF K ELV IT E+D T Sbjct: 238 NLYNDEIINLEK-PIRLTGFTECFRSEVGSGGKDMRGIIRNHQFKKVELVKITSEKDWET 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E+ +ML A+ +L+ L+L YR + LCTGDLGFS+ T DLEVWL + YREISS S G Sbjct: 297 EYNQMLEQAKLVLEELELPYRELKLCTGDLGFSSRTTVDLEVWLPSELKYREISSVSYMG 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RYRD N++ ++F HT+NGSG+A+ R + AILENY N+DG+V+IP L PY Sbjct: 357 DFQARRAMIRYRDENNE-VQFAHTMNGSGLAIDRLIAAILENYQNSDGTVSIPKKLIPYF 415 Query: 418 NNLAV 422 N + Sbjct: 416 GNDKI 420 >gi|15921761|ref|NP_377430.1| seryl-tRNA synthetase [Sulfolobus tokodaii str. 7] gi|30173199|sp|Q970Y4|SYS_SULTO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|15622548|dbj|BAB66539.1| 453aa long hypothetical seryl-tRNA synthetase [Sulfolobus tokodaii str. 7] Length = 453 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 145/449 (32%), Positives = 225/449 (50%), Gaps = 30/449 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R NP+ L +K+R ++ + + LD+K R ++++E +R N S+ I +A Sbjct: 6 LELVRNNPDKLKEYIKRRFIDVSLVDRAVELDKKWRQTLQEVEKLRHEHNVISSSIPKAK 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 L + L + L EKE + + ++ +PN+ + PIG + Sbjct: 66 ----PEERQELIKKAKELLKALEEKEKELDNIENERDNILMQLPNIVDDSAPIGPDETYS 121 Query: 123 ILIRSVGKKPSAIHLSREHFE----------------------IGEALGLMDFDRATKLS 160 + IR GK E + L L D +A ++S Sbjct: 122 VPIRFWGKFKVYEKDEAEFLSQLKGNRVDYEIIHWKPVGHADMLENVLKLGDTKKAAEVS 181 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 GARF L + L+ AL + ID T GYT V P ++R E + + F D ++ Sbjct: 182 GARFYYLFDDIVWLDIALLNYAIDTMT-SKGYTLVLPPYMLRGEVIKSVIDLDTFKDAIY 240 Query: 221 CT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI T+E + LY E I + LPL++ ++P+FR EAG+A +D +G+ R H Sbjct: 241 KIENEDLYLIATAEHPIAALYFKEEIPKEKLPLKYVGISPAFRKEAGAANKDLKGIFRVH 300 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + EDS+ HE ++ AEEI + L L YRV+++ TGDLG A K YDLEV Sbjct: 301 QFHKVEQFIFSSPEDSWKLHEELIRNAEEIFQGLGLPYRVINIATGDLGACAAKKYDLEV 360 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q +RE+ SCS C ++Q+ RM RY + K + HTLN + +A R + AILEN Sbjct: 361 WMPAQAKFREMVSCSNCLDWQAYRMRIRYVEKGGKK-GYVHTLNSTAIASTRTITAILEN 419 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 Y DG V IP VL+ Y+ + K++I Sbjct: 420 YQREDGVVEIPKVLKKYLEPFSRAPKDYI 448 >gi|121536069|ref|ZP_01667851.1| seryl-tRNA synthetase [Thermosinus carboxydivorans Nor1] gi|121305351|gb|EAX46311.1| seryl-tRNA synthetase [Thermosinus carboxydivorans Nor1] Length = 297 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 161/295 (54%), Positives = 206/295 (69%), Gaps = 2/295 (0%) Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 R H+EIGE LG++DF+R K++GARF+ G A LERAL FM+DLHT EH Sbjct: 3 PRQFAWEPRPHWEIGERLGILDFERGGKVTGARFTFYKGAGARLERALINFMLDLHTREH 62 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEIIESKS 249 GYTE P +V ++M GTGQ+PKFA DMF +LIPT+EV +TNL+ EI+++K Sbjct: 63 GYTEFFPPFIVNADSMVGTGQLPKFAQDMFKLEGLDYYLIPTAEVPVTNLHRQEILDAKD 122 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LPL + + FR+EAG+AGRDTRG++RQHQF K ELV T E+S+ E E++ + AE + Sbjct: 123 LPLYYAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTLPEESYNELEKLTNNAERV 182 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR 369 L+ L L YRVV LCTGD+GF++ KTYDLEVWL N YREISSCS +FQ+RR + ++R Sbjct: 183 LQLLGLPYRVVLLCTGDMGFASAKTYDLEVWLPSFNRYREISSCSNFEDFQARRADIKFR 242 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 +F HTLNGSGVA+GR + AILENY DGSV +P VLRPYM + VIK Sbjct: 243 RDAKAKAEFVHTLNGSGVAIGRTVAAILENYQQEDGSVVVPEVLRPYM-GVEVIK 296 >gi|308190318|ref|YP_003923249.1| seryl-tRNA synthetase [Mycoplasma fermentans JER] gi|319777714|ref|YP_004137365.1| seryl-tRNA synthetase [Mycoplasma fermentans M64] gi|238810224|dbj|BAH70014.1| hypothetical protein [Mycoplasma fermentans PG18] gi|307625060|gb|ADN69365.1| seryl-tRNA synthetase [Mycoplasma fermentans JER] gi|318038789|gb|ADV34988.1| Seryl-tRNA synthetase [Mycoplasma fermentans M64] Length = 423 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 171/428 (39%), Positives = 264/428 (61%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+++++ +N + + ALK R+ + Q ++ K L+ + + +A S + Sbjct: 1 MLNLKYVLENEKKVKEALKNRNFDLKQFNELIKEANKRGKLMFEAQSKKAELTKFSKEFA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N + + L+ E + +K++ LE+ + + ++ IPN+ +E+VP+G Sbjct: 61 ANK--NNKTKLAKLQKEVANIKKEQVALEEAAKNIEKKVNDILIRIPNISMEDVPLGKDE 118 Query: 120 NEN-ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+N ++ + + H+ I + L ++D +RA K+SG+RF + G A L RA+ Sbjct: 119 NQNKVIKNHDKLGRGLVSGVQPHYVIAKDLDIIDLERAVKMSGSRFVIYKGLGARLARAI 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 FM+DLHT ++GY E S P++V+ E ++GTGQ+PKF +D+F +LIPT+EV LT Sbjct: 179 MNFMLDLHT-KNGYEEYSVPVIVKPEILFGTGQLPKFKEDLFALEDAQSYLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y++EII+ P+R T FRSEAGS+G+DTRG++R HQF K ELV I E+D Sbjct: 238 NYYNNEIIDLSK-PIRMTAFTECFRSEAGSSGKDTRGIIRNHQFKKVELVKIVSEKDWEA 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E +ML A+ +L+ L++ YR + LCTGDLGFS+ KT DLEVWL + YREISS S G Sbjct: 297 EFNQMLEQAKSVLEELEIPYRELLLCTGDLGFSSRKTIDLEVWLPSEIKYREISSVSYMG 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RY++ N +++ + HT+NGSG+A+ R + AILENY N DGS+TIP L PYM Sbjct: 357 DFQARRAMIRYKNENGENV-YAHTMNGSGLAIDRLIAAILENYQNKDGSITIPKKLVPYM 415 Query: 418 NNLAVIKK 425 + + I K Sbjct: 416 DGITKITK 423 >gi|302538647|ref|ZP_07290989.1| seryl-tRNA synthetase [Streptomyces sp. C] gi|302447542|gb|EFL19358.1| seryl-tRNA synthetase [Streptomyces sp. C] Length = 427 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 143/430 (33%), Positives = 216/430 (50%), Gaps = 10/430 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+DI+ IR + EH+ AL KR E + +L D + R L+ ++E R+ R + IG Sbjct: 1 MIDIELIRTDTEHVRKALLKRMDEVDLDAVLDADRRRRTLVGQVEAARSERKRKAKDIGL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + + + L + + ++ E L+ L+ +PN+P E P G Sbjct: 61 LRASG--ADTAEAQRAAAALGDDITRMQSELDLAERRLRDLLMELPNLPDERTPAGGKEA 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ G++P +H E+ + LGL+DF R KL G + + TG A LE AL Sbjct: 119 NQVVRT-WGEQPDLGDTPLDHVELCDRLGLVDFARGVKLGGNGYWLYTGAGAALEWALID 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----DGRWLIPTSEVS 235 F H GYT + P L+ +E+ + GQ PKF DD+F +L+PT+E + Sbjct: 178 FFNREH-YAAGYTFMLPPHLLTEESGFAAGQFPKFYDDVFHVQAGEDDRKSFLLPTAETA 236 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 + N+Y EI+ + +LP + PS+R EAGS RG +R HQF K E+ + + Sbjct: 237 ILNVYRDEILPTDTLPFKAFAYTPSYRREAGSHRSSERGTIRGHQFNKVEMFQFAAPDQA 296 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 ++ E ++++L LHY+ L D + TYD+EVW+ Y+E+SS S Sbjct: 297 EEAFRELVDRTEMLVEKLGLHYQTTLLAARDASATMRMTYDVEVWIPSIASYKEVSSASW 356 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 G++Q+RR N RYR HTLN SG+A R L AILE DGSVT+P LR Sbjct: 357 AGDYQARRANIRYRPAAGGPTAHVHTLNASGLATSRLLPAILEQNQRPDGSVTVPEPLRA 416 Query: 416 YMNNLAVIKK 425 ++ VI Sbjct: 417 WV-GTDVIHP 425 >gi|229818879|ref|YP_002880405.1| seryl-tRNA synthetase [Beutenbergia cavernae DSM 12333] gi|259511661|sp|C5BWI5|SYS_BEUC1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|229564792|gb|ACQ78643.1| seryl-tRNA synthetase [Beutenbergia cavernae DSM 12333] Length = 423 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 153/428 (35%), Positives = 242/428 (56%), Gaps = 11/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R+NP+ + + R +P+ + +L D ++R L+ E RA + S +G Sbjct: 1 MIDLKALRENPDVGRASQRSRGEDPELVDRLLDADARHRALLTSFEQQRAEQKELSRAVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + +++ K+ EQ+ E + + L L+S +PN+ + VP G Sbjct: 61 KAAPQDRPAVLAHAKSRA----EQVKSAEADADRARAELDALLSRMPNIVADGVPPGGED 116 Query: 120 NENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L + + R+H E+GE L +D +R K+SGARF LTG A LE A Sbjct: 117 DYVVLRHEGTPRDFAAEGFTPRDHLELGERLRAIDTERGAKVSGARFFYLTGLGARLELA 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSL 236 L ID G+T V P LV+ E M GTG + A++++ D +L+ TSEV+L Sbjct: 177 LLNAAIDKAL-TAGFTPVITPTLVKPEIMAGTGFLGAHAEEVYRIEKDDLYLVGTSEVAL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +++EI++ PLR+ + +R EAGS G+DTRG++R HQF K E+ S R ED+ Sbjct: 236 AGYHANEIVDLSDGPLRYAGWSACYRREAGSHGKDTRGIIRVHQFHKVEMFSYARLEDAA 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 EHER+L+ EE+L+ ++L YRV+ GDLG SA + +D E WL Q Y E++S S C Sbjct: 296 VEHERLLAWEEELLRLVELPYRVIDTAAGDLGSSAARKFDCEAWLPTQERYLELTSTSNC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR+ +R R + S + TLNG+ +A R ++ ILEN+ N DGSV +P L+PY Sbjct: 356 TSFQARRLGTRERLEDG-STRPVATLNGT-LATTRWIVTILENHQNPDGSVRVPAGLQPY 413 Query: 417 MNNLAVIK 424 + L ++ Sbjct: 414 LGGLTELR 421 >gi|325000779|ref|ZP_08121891.1| seryl-tRNA synthetase [Pseudonocardia sp. P1] Length = 416 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 146/415 (35%), Positives = 234/415 (56%), Gaps = 13/415 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ RQ+P+ AL +R + +L++D + R L ++ +RA + + Sbjct: 1 MIDLKAARQDPDTFRTALSRRGASADFDALLAVDVRWRELTDRVGGLRAAQKQ------R 54 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + V+ K E KE+L E E + +L++ IPN+P G + Sbjct: 55 PKGKPTPEQVEQFKKE----KEELREAEDELATADAERAELLARIPNLPDPTAADGMAEE 110 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + + +R+ G++PS R+H ++ + G +D R +LSG+RF+ G +A LE AL + Sbjct: 111 DAVTVRTWGERPSFDFEPRDHLDLASSTGRVDMVRGARLSGSRFAYRFGDVALLEMALFR 170 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNL 239 ++ID S G+ V P+L ++AMYGTG +P +++ DG +L TSEV+L + Sbjct: 171 YVID-KLSGEGFVPVLGPVLANEKAMYGTGFLPTEESNLYQLEKDGLYLTGTSEVALAGI 229 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + EI+E LP R+ + +FR EAG+AG+DT+GM R HQF K E+ R E S H Sbjct: 230 HMDEIVELDDLPARYVAFSTNFRREAGAAGKDTKGMFRVHQFDKVEMYVYCRPEQSQEFH 289 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E++L+ E I++ L L YRV ++ GDLG A K YD+E W Q YREI+SCS ++ Sbjct: 290 EQLLAHEESIVQELGLPYRVQNIAVGDLGNPAAKKYDIEAWFPVQQRYREITSCSNTTDY 349 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 Q+RR+N R+R + HTLNG+G A R ++A++EN+ + G+V +P VL+ Sbjct: 350 QARRLNVRFRREPGAPTENVHTLNGTG-ATARAMLAVMENFQDEHGTVAVPEVLQ 403 >gi|167464554|ref|ZP_02329643.1| seryl-tRNA synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 292 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 152/292 (52%), Positives = 201/292 (68%), Gaps = 1/292 (0%) Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 ++ H+++ L ++DF+RA K++G+RF G A LERAL FM+DLH+ EHGY E+ Sbjct: 1 FETKPHWDLAAGLDILDFERAGKVTGSRFVFYKGLGARLERALLNFMMDLHSDEHGYMEI 60 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNLYSHEIIESKSLPLRF 254 P LV +++ GTGQ+PKFA+D+F + + IPT+EV +TN + EI+ + LP F Sbjct: 61 LPPYLVNRDSLTGTGQLPKFAEDVFRIDNSDYFLIPTAEVPVTNYHRDEILTEEQLPGNF 120 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 + FRSEAG+AGRDTRG++RQHQF K ELV + + EDS+ E E + S AE +L+ L Sbjct: 121 VAFSACFRSEAGAAGRDTRGLIRQHQFNKVELVKLVKPEDSYKELEILTSHAERVLQLLH 180 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK 374 L YRV++LCTGDLGFS+ KTYDLEVWL YREISSCS +FQ+RR N R+R Sbjct: 181 LPYRVLTLCTGDLGFSSAKTYDLEVWLPSSGTYREISSCSNFEDFQARRSNIRFRRDAKA 240 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 +F HTLNGSG+A+GR + AILENY DGSV IP VL PYMN + I K+ Sbjct: 241 KPEFVHTLNGSGLAIGRTVAAILENYQQEDGSVVIPDVLVPYMNQITHISKK 292 >gi|148910656|gb|ABR18398.1| unknown [Picea sitchensis] Length = 466 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 129/439 (29%), Positives = 220/439 (50%), Gaps = 17/439 (3%) Query: 1 MLDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R++ PE + + ++R + + + ++ LD+ R +++++R N + Sbjct: 1 MLDINLFREDKGNDPERVRESQRRRFAKVELVDEVIELDKAWRQRQYELDNLRKEFNRIN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 ++ + +T ++ E E +L L+ I N+ + VP+ Sbjct: 61 KEVARLKIA--KEDASETIKQTEENRKLTAKKETEVQAAKVALDFLLGSIGNLVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N ++R+ G++ ++L + H E+ + LG+ D D+ ++G R L G L Sbjct: 119 SNDEANNEVVRTWGERREELNL-KNHVELVQLLGIADLDKGADVAGGRGFYLKGDGVLLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +AL F + + G+ + P +R E M Q+ +F ++++ T D ++LI T+ Sbjct: 178 QALINFGLAF-LRKRGFLPLQTPFFMRKEVMAECAQLAQFDEELYKVTGEGDDKYLIATA 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I +LP+R+ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 237 EQPLCAYHRGDWIHPTTLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSP 296 Query: 293 E--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 DS+ HE M+ +E+ K L++ Y++VS+ +G L +A K YDLE W YRE+ Sbjct: 297 NGKDSWDMHEEMIKNSEDFYKELNIPYQIVSIVSGALNDAAAKKYDLEAWFPASKAYREL 356 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C +FQSR M RY + N + ++ H LN + A R + ILEN G + Sbjct: 357 VSCSNCTDFQSRNMEIRYGQKKSNEQVKQYVHLLNSTLSATERTICCILENNQKE-GGIE 415 Query: 409 IPTVLRPYMNNLAVIKKEH 427 IP VLRP+M ++ + ++ Sbjct: 416 IPKVLRPFMLDIDFLPFQN 434 >gi|258650495|ref|YP_003199651.1| seryl-tRNA synthetase [Nakamurella multipartita DSM 44233] gi|258553720|gb|ACV76662.1| seryl-tRNA synthetase [Nakamurella multipartita DSM 44233] Length = 420 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 142/427 (33%), Positives = 235/427 (55%), Gaps = 11/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R +P+ + + R + + +L+ D R + + + +RA + S IG Sbjct: 1 MIDLRIVRDDPDRVRASQHARGEDSGAVDRLLAADADRRAAVARADSLRAEQKSYGRTIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA + +L++ K + +K ++ + + + + + I P Sbjct: 61 QASKDERPALLERGKAMAAEVKLAEAAEQEANAALAVAHRSIANIIEGAP------PGGE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + ++++ VG+ R+H E+GE LG +D +R TK+SGARF L G A L+ AL Sbjct: 115 QDYLVVKEVGRPTEFDFTPRDHVELGERLGAIDIERGTKVSGARFYFLRGVGAQLQWALL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 + H + + P+LV+ EAM GTG + AD+++ D +L+ T+EV L Sbjct: 175 NLAVSTAI-GHDFVPMIPPVLVKPEAMEGTGFLGAHADEIYRLEADDMYLVGTAEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + PLR+ + FR EAGS G+DTRG+LR HQF K E+ + ED+ + Sbjct: 234 YHAGEILDLSAGPLRYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVFCKPEDAADQ 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H ++LS E++L +++L YRV+ GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HAQLLSFEEQMLAQMELPYRVIDTAAGDLGSSAARKFDCEAWVPTQQTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD + K + TLNG+ +A R L+AILEN+ ADGSV +P L+P + Sbjct: 354 FQARRLGVRYRDEDGK-PQVAATLNGT-LATTRWLVAILENHQQADGSVRVPKALQPGLG 411 Query: 419 NLAVIKK 425 V++ Sbjct: 412 GREVLEP 418 >gi|115437620|ref|NP_001043340.1| Os01g0559100 [Oryza sativa Japonica Group] gi|57899337|dbj|BAD87948.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group] gi|57900427|dbj|BAD87663.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group] gi|113532871|dbj|BAF05254.1| Os01g0559100 [Oryza sativa Japonica Group] Length = 425 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 127/438 (28%), Positives = 211/438 (48%), Gaps = 37/438 (8%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R +PE + + + R + + +++LD++ R +++ IR N S Sbjct: 1 MLDINLFRTEKGGDPELIRRSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ A AL S+L + I N+ E VP+ Sbjct: 61 KEIGKLKA--KKEDASALI--------------------QSTLDAKLVTIGNIVHESVPV 98 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N+++R+ G++ +L + H ++ + L ++ ++ ++G R L L Sbjct: 99 SDDEANNLIVRTWGERRLEGNL-KNHVDLCKMLDIVALEKGADVAGGRGYYLKDEGVLLN 157 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 AL F + + G+ + P +R E M Q+ +F ++++ T + ++LI TS Sbjct: 158 LALINFGLAF-LRKRGFKPMQTPFFMRKETMGKCAQLAQFDEELYKLTGDGEEKYLIATS 216 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+R+ + FR EAGS GRDT G+ R HQF K E +T Sbjct: 217 EQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSP 276 Query: 293 ED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 D S+ HE M+ +E+ K + L Y++VS+ +G L +A K YDLE W YRE+ Sbjct: 277 NDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYREL 336 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C +FQ+RR+ Y + + +S +F H LN + A R L ILEN+ +G V Sbjct: 337 VSCSNCTDFQARRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKENG-VE 395 Query: 409 IPTVLRPYMNNLAVIKKE 426 +P L+PYM + + + Sbjct: 396 VPKALQPYMGGIDFLPFK 413 >gi|15826923|ref|NP_301186.1| seryl-tRNA synthetase [Mycobacterium leprae TN] gi|221229401|ref|YP_002502817.1| seryl-tRNA synthetase [Mycobacterium leprae Br4923] gi|18202779|sp|Q9CDC1|SYS_MYCLE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|254783039|sp|B8ZTU5|SYS_MYCLB RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|13092470|emb|CAC29590.1| putative seryl-tRNA synthase [Mycobacterium leprae] gi|219932508|emb|CAR70175.1| putative seryl-tRNA synthase [Mycobacterium leprae Br4923] Length = 417 Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 149/419 (35%), Positives = 229/419 (54%), Gaps = 11/419 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D+Q +R++P+ + + R +P + +L+ D R I + +RA + + S +G Sbjct: 1 MIDLQLLREDPDVVRRSQLSRGEDPALVDALLTADTARRAAISAADSLRAEQKATSKSLG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A AE + L L EQ+ E + E ++ I NV L+ VP G Sbjct: 61 AASAEDRPA----LLERAKDLAEQVKAAETTQAETAAAFAAAYMAISNVVLDGVPTGGKD 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L P + ++H E+GEALGL+D R K+SG+RF LTG A L+ L Sbjct: 117 DYAVLDIVGDPPPLSN--PKDHLELGEALGLIDMQRGAKVSGSRFYFLTGRGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 Q + L E+ + + P+LVR E M GTG + A++++ D +L+ TSEV + Sbjct: 175 QLALRLAV-ENDFIPMIPPVLVRPEVMSGTGFLGAHAEEVYRV-DDLYLVGTSEVPMAGY 232 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EI++ PLR+ + FR EAGS G+DTRG++R HQF K E D+ EH Sbjct: 233 HSDEILDLSVGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCAPTDAEVEH 292 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +R+L E+L R+++ YRV+ + GDLG SA + +D E W+ Q Y E++S S C F Sbjct: 293 QRLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQGSYCELTSTSNCTTF 352 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 Q+RR+ +RYRD + K + TLNG+ + R L+AILEN+ DGSV +P L P++ Sbjct: 353 QARRLATRYRDASGK-PQIVATLNGT-LGTTRWLVAILENHQRPDGSVRVPPALVPFVG 409 >gi|257076767|ref|ZP_05571128.1| seryl-tRNA synthetase [Ferroplasma acidarmanus fer1] Length = 443 Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 143/440 (32%), Positives = 228/440 (51%), Gaps = 28/440 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ +R + E + + R + + SLD K R +K + + +N +A I Sbjct: 1 MIDIKLLRSDKERFYNSCRARGFDLNILDEFFSLDLKWRENLKILNTYKHDKNIITADIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +G +D LK E + +++ +LE+E++++ S +L IPN+ E+VPI Sbjct: 61 SLVKKG--ENIDNLKLEVEKINKKISLLEEEQNDIESKRNELARLIPNLLAEDVPICKGD 118 Query: 120 NENILIRSVGKKPSA--------------------IHLSREHFEIGEALGLMDFDRATKL 159 + L+R VG +H + E L D +RA K+ Sbjct: 119 ENSKLVRYVGNARVFKDDIENFREGSGNSKDYTVIDKKPVDHQTLMEKYNLADIERAGKI 178 Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +G+RF L L LE AL + +D S+ +T + P ++ +M G I F + + Sbjct: 179 AGSRFYFLKNRLFKLELALINYGVDF-LSQRNFTVMEPPFMINYASMSGATDIETFKESL 237 Query: 220 FCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + D +LI T+E L ++ S EI+E LPLR + ++P FR EAG+ GRDT+G+ R Sbjct: 238 YKIEGDDLYLIATAEHPLASMLSGEILEESELPLRVSGVSPCFRREAGAHGRDTKGIFRV 297 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 HQF K E R E+S+ + ++ +E+I K L L YR+V++C+GDLG A K YD+E Sbjct: 298 HQFNKIEQFIYCRPEESWDFFDELVKNSEDIYKSLGLPYRIVNICSGDLGSLAAKKYDIE 357 Query: 339 VWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 VW Q +RE+ S S ++Q+R +N RYR + F HTLN + +A R L+AI+E Sbjct: 358 VWYPSQGKFREVVSASNDTDYQARSLNIRYRAKDGNK--FAHTLNSTAIATERVLVAIME 415 Query: 399 NYLNADGSVTIPTVLRPYMN 418 N+ D + +P VL PY Sbjct: 416 NFQ-EDDYIKVPDVLVPYTG 434 >gi|203284145|ref|YP_002221885.1| seryl-tRNA synthetase [Borrelia duttonii Ly] gi|238690556|sp|B5RL50|SYS_BORDL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|201083588|gb|ACH93179.1| seryl-tRNA synthetase [Borrelia duttonii Ly] Length = 424 Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 146/432 (33%), Positives = 228/432 (52%), Gaps = 13/432 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N E + +K R L+ + + ++S D++ R LI KI ++ A RN N+ Sbjct: 1 MLDLKFIRDNLELVRENIKNRGLKLELDLLISFDDERRKLITKIGELNALRNENA---NA 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S L + LK ++ LE+ + S L IPN+ +VP+G S + Sbjct: 58 MKDNIDDSSRHYLIEKGKALKAEIMDLEERLGYLTSRLLVEHKRIPNISAPDVPVGVSED 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN++++ G P ++H EIG L L DF++A ++SG +F L LE A+ Sbjct: 118 ENVVLKVSGNIPKFDFKPKDHLEIGIHLDLFDFEKAREVSGNKFYYLKNEAVFLELAMIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F G+ P + R+ + G G P+ A+ ++L+ T+E++L Sbjct: 178 FAFS-KLKAKGFDLFITPDVAREFIVDGIGFNPRGAESNIYKIEDTDKYLVGTAEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y + I++ KS PL+ L+ FR EAG+AG+ ++G+ R HQF K E+ R EDS Sbjct: 237 YYYNTILDLKS-PLKMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCFCRSEDSDRI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCST 355 H L EEI L++ YRV+++C+ DLG A K YD+E W+ G+ Y E++S S Sbjct: 296 HNEFLELEEEIFTELEIPYRVLNVCSSDLGAPAYKKYDIEAWMPGRGENGDYGEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+ KF H +NG+ +A R LIAILEN+ +A G V IP L Sbjct: 356 CTDYQSRRLKIRYK--EDGQNKFVHMINGTAIASTRTLIAILENFQDAKGGVRIPKSLVK 413 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 414 YT-GFDYISPKN 424 >gi|146304700|ref|YP_001192016.1| seryl-tRNA synthetase [Metallosphaera sedula DSM 5348] gi|172046949|sp|A4YI40|SYS_METS5 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|145702950|gb|ABP96092.1| seryl-tRNA synthetase [Metallosphaera sedula DSM 5348] Length = 455 Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats. Identities = 154/449 (34%), Positives = 238/449 (53%), Gaps = 29/449 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ IR NP+ L +L+KR++ PQ E + LD+K R +++++E +R N S+QI + Sbjct: 6 LELIRNNPDSLMESLRKRNVNPQLAEKAVELDKKWRAILQEVEKLRHEHNVVSSQIPRLS 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E ++ +N S ++ + EKE + ++ +PNV E VP+G + N Sbjct: 66 PEERKKKIEEARNLLSIIEAK----EKELKTIEEERDNILRTLPNVVHESVPVGPDDSYN 121 Query: 123 ILIRSVGKKPSAIHLSREHFEIGEALGL----------------------MDFDRATKLS 160 + I+ GK E + L + +A +++ Sbjct: 122 VPIKVWGKFRVYEKDVNEFLSQVKGLNPDYEIIKFKPVGHADELEAVLKLGNTAKAGEVA 181 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G+RF L +A LE+AL + +D+ T GY+ V P ++R E + + F D ++ Sbjct: 182 GSRFYYLFEDVAWLEQALIAYALDVIT-SKGYSLVIPPYMLRGEVIQSVIDLDTFKDAIY 240 Query: 221 CTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI T+E + LY E IE++ LPLR+ L+P+FR EAG+A +D +G+ R H Sbjct: 241 KIEGEDLYLIATAEHPIAALYFKEEIEAERLPLRYVGLSPAFRKEAGAANKDLKGIFRVH 300 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + EDS+ HE +L AE+I + L+L YRVV++ +GDLG A K YDLEV Sbjct: 301 QFNKVEQFIFSLPEDSWKFHEELLGNAEQIFQGLELPYRVVNIASGDLGACAAKKYDLEV 360 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q +RE+ SCS C ++Q+ RM R+ D F HTLN + VA R + AILEN Sbjct: 361 WMPAQAKFREMVSCSNCTDWQAFRMKIRFVDRKKNRKGFVHTLNSTAVATTRAITAILEN 420 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 DGSV IP VLRPY+ K++I Sbjct: 421 NQLEDGSVVIPKVLRPYLERFQRAPKDYI 449 >gi|302784382|ref|XP_002973963.1| hypothetical protein SELMODRAFT_414448 [Selaginella moellendorffii] gi|300158295|gb|EFJ24918.1| hypothetical protein SELMODRAFT_414448 [Selaginella moellendorffii] Length = 419 Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats. Identities = 117/426 (27%), Positives = 205/426 (48%), Gaps = 12/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ +R +P + + ++R E + ++ LD + R +E A N +I Sbjct: 1 MLDIKLLRDDPALVKESQRRRFQPESDVDDVIDLDRQWRTAQFNLEKKSADINKIEKEIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + S L E L+ + L+ ++ L + + N+ + VP+ ++ Sbjct: 61 KLLRTNGDS--ANLLAEKGALENEHTELKLRASKLKLELDSKLKSLGNLVHDSVPVSSNE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +++ G H + + L +D +R ++G R L L AL Sbjct: 119 KDKVVVTKWGVPRQDQEALENHVSLCKKLDAVDVERGAAVAGHRGYYLLDPGFELNMALV 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 F + + GY ++ P L+ M Q+ +F ++++ +G++LI TSE +L Sbjct: 179 NFGLKF-LKDRGYRKIQTPTLMDKAVMKCCAQLSQFDEELYELAGEGKYLIATSEQALCG 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + +SLPLR+ + FR EAGS G+DT G+ R H+F K E +T E S+ Sbjct: 238 YLKDKNVAPESLPLRYAGYSSCFRKEAGSHGKDTLGIFRVHEFQKVEQFCVTAPETSWDM 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M+ +E+ ++L L Y+VV++ +G+L +A K YDLE W Y E+ SCS C + Sbjct: 298 LEEMIKTSEDFYQQLGLPYQVVNVVSGELNDAAAKKYDLEAWFPAAGKYEELVSCSNCTD 357 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+R +N + K H LN + VA R + I+ENY +G V +P VL+P+M+ Sbjct: 358 YQARSLNIK------SGKKLVHLLNCTLVATQRTMCCIVENYQTRNG-VRVPEVLQPFMD 410 Query: 419 NLAVIK 424 + Sbjct: 411 GTTFLP 416 >gi|284931761|gb|ADC31699.1| Seryl-tRNA synthetase [Mycoplasma gallisepticum str. F] Length = 420 Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats. Identities = 167/426 (39%), Positives = 242/426 (56%), Gaps = 8/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD ++ N + + LK R + L L+++ L+K IE + ++N N+ Sbjct: 1 MLDKNLLKTNSKEIREQLKSRSFNLDWYDEFLRLEKQLSTLLKTIEKLNEQKNLNAK--- 57 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + + L E L+ +L E + +E+ + IPN+P E+VPIG Sbjct: 58 KAATAESDAQRKKLIQEGGLLRAELEKNEAKYNEIKEDFDYIYQRIPNLPTEDVPIGKDE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + K H+E+ L ++ D A+K++G+RFS+ A L RA+ Sbjct: 118 KENVEMFKSRKPTFFDFKPLPHYELATKLEMIGLDVASKITGSRFSIYKKDGARLMRAIQ 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 QF +D++ Y E P++V ++ YG+GQ PKF +D+F +L T+EV L N Sbjct: 178 QFCLDVNAD--KYEEYLPPVIVNKDSYYGSGQFPKFVEDVFKLEGTNYYLASTAEVQLVN 235 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ +EI++ LP +T FRSEAGSAG+DT+G++RQHQF+K ELV I S E Sbjct: 236 LHRNEILKEADLPKYYTASTACFRSEAGSAGKDTKGLIRQHQFYKTELVKIVHPSTSKQE 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE M AE+IL+ L+L YR + LCTGD+GFSA KTYDLEVW+ +N YREISS S CG+ Sbjct: 296 HEAMAKDAEKILELLELPYRRMVLCTGDMGFSATKTYDLEVWIPSENKYREISSISNCGD 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N +++D SK + HTLN S +A R +AI+ENY DGS+ IP L Y Sbjct: 356 FQARRANIKFKDAISKKNLYVHTLNASALAHDRLFVAIVENYQQKDGSIKIPKALVKYF- 414 Query: 419 NLAVIK 424 IK Sbjct: 415 GKEYIK 420 >gi|145349865|ref|XP_001419347.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579578|gb|ABO97640.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 435 Score = 329 bits (844), Expect = 5e-88, Method: Composition-based stats. Identities = 118/437 (27%), Positives = 210/437 (48%), Gaps = 16/437 (3%) Query: 1 MLDIQWIR----QNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ +R +PE + + ++R + +L+LD R ++++ N + Sbjct: 1 MLDVNMLRPDKGGDPEAVRESERRRFGRVEDVDDVLALDLAWREARHALDEVGGEFNKAN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 ++ + G L + + E+ ++E E+ + I N+ + VP+ Sbjct: 61 KEVAMLMKAGKKDEAAPLMAKVKEIDERKKAAAEKEKELEEKTTTALLKIGNIVHDSVPV 120 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N+++R+ G+K L H ++ L + D ++ T+++G R L G A L Sbjct: 121 SNDEENNVIVRTWGEKRMEEKLPN-HVDLISMLDIADVEQGTEVAGGRGYYLKGAGALLN 179 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +A+ + + + G+T ++ P +R + M Q+ F + ++ T D ++LI TS Sbjct: 180 QAVINYALAF-LASRGHTPLATPFFMRKDRMAECAQLADFDEQLYKVTGEGDDKYLIATS 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E + + + + LP+RF + FR E GS GRDT G+ R HQF K E Sbjct: 239 EQTCCSYLRKRWLNTNQLPIRFAGYSTCFRKEVGSHGRDTLGIFRVHQFEKVEQFVAVSG 298 Query: 293 E--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E S+ E ER++ +E + L++ Y+VV++ +G+L +A K YDLE W +RE+ Sbjct: 299 EGNASWDEMERLIGNSEAFYQSLNIPYQVVNIVSGELNDAAAKKYDLEAWFPSSRTFREL 358 Query: 351 SSCSTCGNFQSRRMNSRY---RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 SCS C ++QSRR+ R + + H LN + A R L ++EN+ +G V Sbjct: 359 VSCSNCTDYQSRRLEIREGAPKKGPENKKAYVHLLNSTLTATERTLCCLIENWQTPEGLV 418 Query: 408 TIPTVLRPYMNNLAVIK 424 +P LRP+MN + I Sbjct: 419 -VPPALRPWMNGIEFIP 434 >gi|255075441|ref|XP_002501395.1| predicted protein [Micromonas sp. RCC299] gi|226516659|gb|ACO62653.1| predicted protein [Micromonas sp. RCC299] Length = 482 Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats. Identities = 120/440 (27%), Positives = 204/440 (46%), Gaps = 20/440 (4%) Query: 1 MLDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R + PE + + ++R + ++++D K R +++ + A N + Sbjct: 1 MLDINLFRTDKGGDPEIVRESQRRRFARVEDVDDVIAMDAKWRDARWELDSVNAEFNKAN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 ++ + D + L + LE++E + ++ L+ I N+ + V + Sbjct: 61 KEVSKLKVA--KENADEAIAKVKELAARRVELEQQEKDAEEAVNTLLKRIGNIVHDSVVV 118 Query: 116 GTSANENILIRSVGKKPS-AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 N ++R+ G H ++ L + D + T ++G R LTG L Sbjct: 119 SQDEENNAIVRTFGLDTKRMEEKLPNHVDLIAMLDIADTEHGTDVAGGRGYFLTGAGVLL 178 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLI 229 +AL + + + G+T + P +R + M Q+ F + ++ + ++LI Sbjct: 179 NQALINYALAF-LAGRGHTPLGTPFFMRKDRMAECAQLADFDEQLYKVSEGDDKEDKYLI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 TSE + + I+ K LP+R + FR EAGS GRDT G+ R HQF K E Sbjct: 238 ATSEQTCCSFLRKRWIQPKELPIRLAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFVA 297 Query: 290 TREE--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + +S+ E ERM+ +E + L + Y+VV++ +G+L +A K YDLE W + Sbjct: 298 VSPDGDESWQEMERMIGNSEAFYQSLGIPYQVVNIVSGELNDAAAKKYDLEAWFPSSKTW 357 Query: 348 REISSCSTCGNFQSRRMNSRYRDPN---SKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 RE+ SCS C +FQSRR+ R K + H LN + A R L +LEN+ + Sbjct: 358 RELVSCSNCTDFQSRRLEIRCGAAQKGPEKKKSYCHLLNSTLTATERTLCCVLENWQTPE 417 Query: 405 GSVTIPTVLRPYMNNLAVIK 424 G V +P LRP+M + I Sbjct: 418 GFV-VPPALRPWMQGIEFIP 436 >gi|71893599|ref|YP_279045.1| seryl-tRNA synthetase [Mycoplasma hyopneumoniae J] Length = 414 Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats. Identities = 175/421 (41%), Positives = 249/421 (59%), Gaps = 12/421 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLD---EKNRILIKKIEDIRARRNSNSAQ 57 M++I+ I N ++ L R + I L +K IL +KI+ + A++N S + Sbjct: 1 MMNIRLILNNKSFVEKKLATRGFDISI--INELYIKGQKRNILRQKIDALLAKKNLISKE 58 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + S LK++ S +K ++ LE E +++ + L + I IPN+P + VP GT Sbjct: 59 IGAFSRQEKDSSF--LKSQVSKIKTEIETLEAEWYQLDTWLNQKILEIPNLPDDSVPFGT 116 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N +I G + H+E G + ++DF RA K+SG RF + A L R+ Sbjct: 117 SELDNQVISHWGIPKKFDQKCKPHYEFGISNKILDFKRAVKISGNRFVIYKNLGAKLVRS 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L FMID H + Y E+ L+ E++YGTGQ+PKF +D++ RWLIPT+EV L Sbjct: 177 LINFMIDTHI-ANDYQEIIPNTLILSESLYGTGQLPKFHNDLYPLKDPNRWLIPTAEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN + EII+ P+ + +RSEAGS GRDT+G++R H+F K ELV IT+E D Sbjct: 236 TNYFREEIIDLAK-PISLVGYSKCYRSEAGSGGRDTKGLIRLHEFHKVELVKITKEADGL 294 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 TE E ++ A ILK L++ +RVV L T DLGFS+ KT DLE WL +N YRE+SS S C Sbjct: 295 TEFENVVKDASRILKLLEIPFRVVVLSTYDLGFSSKKTVDLEAWLPSENTYREVSSISYC 354 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR RYRD K+ + HT+NGSG+A+ R + +LE Y N DGS T+P VL PY Sbjct: 355 GDFQARRAKIRYRD--GKNNHYAHTINGSGLAIDRLVAILLEQYQNLDGSWTVPKVLEPY 412 Query: 417 M 417 Sbjct: 413 F 413 >gi|329940509|ref|ZP_08289790.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045] gi|329300570|gb|EGG44467.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045] Length = 440 Score = 329 bits (843), Expect = 6e-88, Method: Composition-based stats. Identities = 152/421 (36%), Positives = 222/421 (52%), Gaps = 10/421 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D+ IRQNP + AL KR + + L LD+ R + ++E +R R S +I + Sbjct: 11 MIDVTLIRQNPVRVQQALAKRAVHVDLDEFLRLDDDYRQVRAEMERLRGERKRISGEIAK 70 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G V +L E S + EQL + E+ + + ++ +PN+P +V G N Sbjct: 71 RQRVG--EGVASLHGEASAVGEQLTAVGARLIELEHARQVFLAPLPNLPDADVLAGGKEN 128 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ + G++ R+H E+ LGL+D++R TKL G+ F + G A LE AL Sbjct: 129 NEVIREA-GQRREFGFTPRDHVELARTLGLVDYERGTKLGGSGFWIYRGDGALLEWALLN 187 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD-----MFCTTDGRWLIPTSEVS 235 ++ H + GY V P ++ A Y GQ PKFAD+ R+L+PT+E + Sbjct: 188 HFLEAHVRD-GYEFVLPPHILTFAAGYTAGQFPKFADEVFALEQGEHGPERFLLPTAETA 246 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L NL+ E + LP ++ P +R EAG RG LR HQF K EL T + S Sbjct: 247 LVNLHRDETLPETELPRKYVAYTPCYRKEAGGYRTAERGTLRGHQFNKVELFQFTHPDAS 306 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 H+ +L AE+++K L LHYR+ L GD + KTYD+EVWL Y E+SS S Sbjct: 307 DAAHQELLGRAEDLVKGLGLHYRITRLAAGDTSAAMAKTYDVEVWLPSIEAYVEVSSVSN 366 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RR N RYR KS F HTLNGSG+A R + A+LE + ADG+V +P VL Sbjct: 367 ARDYQARRGNIRYRPQQGKST-FLHTLNGSGLATSRLVPALLEQHQRADGTVEVPDVLHK 425 Query: 416 Y 416 + Sbjct: 426 W 426 >gi|126662916|ref|ZP_01733914.1| serine-tRNA synthetase [Flavobacteria bacterium BAL38] gi|126624574|gb|EAZ95264.1| serine-tRNA synthetase [Flavobacteria bacterium BAL38] Length = 391 Score = 329 bits (843), Expect = 6e-88, Method: Composition-based stats. Identities = 134/393 (34%), Positives = 219/393 (55%), Gaps = 5/393 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML I +IR+N E + L K++L+ + + +++LDEK R +++ I++ N S I Sbjct: 1 MLQIAYIRENKEEVVKKLAKKNLDAKAAIDEVIALDEKRRATQAELDTIKSESNKLSKDI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G + G + + LK ++ L+E+ L + + S L++ + +PN+P + VP G + Sbjct: 61 GDLMKSGEKAKAEILKEKSVQLREKDKELTEVLNAFASKLQEELYKLPNLPADIVPEGKT 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 EN+ + G P + H+E+ + L+DF+ K++GA F V G A L+RAL Sbjct: 121 PEENLNVFQEGDIPKLHEGALPHWELAKKYDLIDFELGVKITGAGFPVYKGKCAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 + +D +T + GY E P +V + + +GTGQ+P M+ D +LIPT+EV +T Sbjct: 181 ITYFLDKNT-DAGYLEYQVPHMVNEASGFGTGQLPDKEGQMYHVGVDDLYLIPTAEVPVT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N++ ++ LP+ T P FR EAGS G RG+ R HQF K E+V I ++S+ Sbjct: 240 NIFRDVLLNENDLPVLCTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDNSYQ 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M+ + IL+ L L YR++ LC GD+ F++ TYD EV+ Q + EISS S Sbjct: 300 ALDGMVEHVKGILQELKLPYRILRLCGGDMSFASALTYDFEVYSTAQERWLEISSVSNFE 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVG 390 FQ+ R+ R++D K+ + HTLNGS +A+ Sbjct: 360 TFQANRLKLRFKDKEGKN-QLAHTLNGSSLALP 391 >gi|256371008|ref|YP_003108832.1| seryl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256007592|gb|ACU53159.1| seryl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 438 Score = 329 bits (842), Expect = 8e-88, Method: Composition-based stats. Identities = 159/440 (36%), Positives = 244/440 (55%), Gaps = 18/440 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D+ +R +P+ + L R ++P+ ++ ++D++ R +I + + +RA + S I Sbjct: 1 MIDLTELRAHPDDVARRLASRGIDPEVVAHLATIDQQLRAVITERDQLRAELRARSRDIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A G L+ L +L LE+ + + +PN+P PIG Sbjct: 61 EARRSGR--DATELQEGARALGNRLDELEQRVDTLTGDRDAIWLTLPNIPSPNAPIGEDE 118 Query: 120 NENILIRSVGKKP------------SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 ++N ++R + + H HFEIG LG++D +RA KLSG+ F++ Sbjct: 119 HDNRVVRQWSPETGTVEPDVDLTSTTPSHRRVPHFEIGRELGILDLERAAKLSGSMFALY 178 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGR 226 A L RAL F +D H + E+ P LVR E M TG +PKFADD + D Sbjct: 179 RNLGARLVRALTNFALDAHAE--AFEEIHPPTLVRRETMVATGHLPKFADDAYVMERDDL 236 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 + IPT+EV LT+LY EI++ LP+R T P +R EAGSAGRDTRG+LR H+F K E+ Sbjct: 237 YAIPTAEVPLTSLYRDEILDLAMLPMRLTAATPCYRREAGSAGRDTRGLLRLHEFDKVEI 296 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 +++ ED+ + H +L AE +L+RL L YRVV LCTGDLG S+ +T+DLEV+ G + Sbjct: 297 LALVAPEDATSMHLELLGRAEALLQRLGLIYRVVDLCTGDLGQSSARTFDLEVYAPGVDA 356 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 + E+SS S ++Q+RR N R+R + ++ HTLNGS +A R + A+LE DGS Sbjct: 357 WLEVSSVSWFSDYQARRANVRFRREPAARPEYVHTLNGSALAWPRVIAALLEQGREPDGS 416 Query: 407 VTIPTVLRPYMNNLAVIKKE 426 + +P L PY+ + + Sbjct: 417 IRLPDALAPYLGTSRLEAPK 436 >gi|297791595|ref|XP_002863682.1| hypothetical protein ARALYDRAFT_331078 [Arabidopsis lyrata subsp. lyrata] gi|297309517|gb|EFH39941.1| hypothetical protein ARALYDRAFT_331078 [Arabidopsis lyrata subsp. lyrata] Length = 439 Score = 329 bits (842), Expect = 8e-88, Method: Composition-based stats. Identities = 132/445 (29%), Positives = 207/445 (46%), Gaps = 36/445 (8%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI R+NPE + + +++ + I+ LD+ R + ++ N + + Sbjct: 1 MLDIDLYRRNPEIIRESQRRKFASVQDVDEIIILDQLWRQRKYDYDCVQRVFNKINNSVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + G + + +K++ E E ++L+ + + N+ + V I Sbjct: 61 KLKISG--ADATEQIKQAEIIKQEATKKGVEVGEAFAALQDKLLTVGNLIHDSVRICDDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N I G+KP L ++D R K+SGAR +L G+ L +AL Sbjct: 119 AFNEEINVWGEKP--------------LLDIVDTKRGAKISGARGFLLKGYGVALNQALI 164 Query: 180 QFMIDL---------HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDG 225 + ++ G+T + L+R E M Q+ +F ++++ D Sbjct: 165 FQVKSCIFIINYSLTFLTKKGFTCIQPNFLMRKEVMEKCAQLSQFDEELYKVIGEGDHDE 224 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 ++LI TSE L + +E I+ LP+R+ + FR EAGS GRDT G+ HQF K E Sbjct: 225 KYLIATSEQPLCAYHQNEWIQPSELPIRYAGYSTCFRKEAGSHGRDTLGIFHVHQFEKVE 284 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 IT DS+ + ML+ +EE + L + YRVVS +G L +A K YDLE W Sbjct: 285 QFCITSPNDSWEMLDEMLNNSEEFYQSLKIPYRVVSDVSGALNNAAAKKYDLEGWFPSSE 344 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSK----SLKFTHTLNGSGVAVGRCLIAILENYL 401 YRE+ SCS C ++QSRR+ RY S K+ H LN + A R + ILENY Sbjct: 345 TYRELVSCSNCTDYQSRRLRIRYGHKKSNDQQTKNKYVHMLNSTLTATQRTICCILENYQ 404 Query: 402 NADGSVTIPTVLRPYMNNLAVIKKE 426 DG V IP VL+P+M + + + Sbjct: 405 REDG-VDIPEVLQPFMGGVTFLPFK 428 >gi|238757608|ref|ZP_04618792.1| Seryl-tRNA synthetase [Yersinia aldovae ATCC 35236] gi|238704113|gb|EEP96646.1| Seryl-tRNA synthetase [Yersinia aldovae ATCC 35236] Length = 387 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 167/384 (43%), Positives = 230/384 (59%), Gaps = 10/384 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + E + +E+ ++L + E ++A RN+ S IG Sbjct: 1 MLDPNMLRNELDAVAERLARRGFKLDVEMLRQQEERRKVLQVETESLQAERNARSKMIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNVLGEKLDAAKAELDKLQNEIRDLALSIPNLPDDSVPVGRDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ R+H +GE G +DF KL+GARF V+ G +A + RAL Q Sbjct: 119 DNLEVSRWGEPRKYDFEVRDHVSLGEMAGGLDFAAGVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF DD+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYLETYVPYLVNHATLYGTGQLPKFGDDLFHTKPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV +TNL EI+E SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V ITR Sbjct: 239 EVPVTNLVRDEILEEDSLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E + AE++L+ LDL YR + LCTGD+GF + KTYDLEVWL QN YREISS Sbjct: 299 EDSMAALEELTGHAEKVLQLLDLPYRKMLLCTGDMGFGSSKTYDLEVWLPAQNTYREISS 358 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSL 376 CS +FQ+RRM +R R+ + Sbjct: 359 CSNMWDFQARRMQARCRNKTDRKP 382 >gi|72080590|ref|YP_287648.1| seryl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] Length = 414 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 174/421 (41%), Positives = 248/421 (58%), Gaps = 12/421 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLD---EKNRILIKKIEDIRARRNSNSAQ 57 M++I+ I N ++ L R + I L +K IL +KI+ + A++N S + Sbjct: 1 MMNIRLILNNKSFVEKKLATRGFDISI--INELYIKGQKRNILRQKIDALLAKKNLISKE 58 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + S LK++ S +K ++ LE E +++ + L + I IPN+P + VP GT Sbjct: 59 IGAFSRQEKDSSF--LKSQVSKIKTEIETLEAEWYQLDTWLNQKILEIPNLPDDSVPFGT 116 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 S +N +I G + H+E G + ++DF RA K+SG RF + A L R+ Sbjct: 117 SELDNQVISHWGIPKKFDQKCKPHYEFGISNKILDFKRAVKISGNRFVIYKNLGAKLVRS 176 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L FMID H + Y E+ L+ E++YGTGQ+PKF +D++ RWLIPT+EV L Sbjct: 177 LINFMIDTHV-ANDYQEIIPNTLILSESLYGTGQLPKFHNDLYPLKDPNRWLIPTAEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN + EII+ P+ + +RSEAGS GRDT+G++R H+F K ELV IT+E D Sbjct: 236 TNYFREEIIDLAK-PISLVGYSKCYRSEAGSGGRDTKGLIRLHEFHKVELVKITKEADGL 294 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 TE E ++ A ILK L++ +RVV L T DLGFS+ KT DLE WL +N YRE+SS S C Sbjct: 295 TEFENVVKDASRILKLLEIPFRVVVLSTYDLGFSSKKTVDLEAWLPSENTYREVSSISYC 354 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR RYR K+ + HT+NGSG+A+ R + +LE Y N DGS T+P VL PY Sbjct: 355 GDFQARRAKIRYR--EGKNNHYAHTINGSGLAIDRLVAILLEQYQNLDGSWTVPKVLEPY 412 Query: 417 M 417 Sbjct: 413 F 413 >gi|162460445|ref|NP_001105110.1| seryl-tRNA synthetase1 [Zea mays] gi|3319776|emb|CAA07600.1| seryl-tRNA synthetase [Zea mays] Length = 457 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 132/442 (29%), Positives = 215/442 (48%), Gaps = 16/442 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R NP+ + + + R + + +++LD+ R +++ IR + S Sbjct: 1 MLDINLFRTDKGGNPDLIRESQRSRFASVELVDEVIALDKAWRERQFELDKIRQAQ-RTS 59 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ A L T +K++L E E E S+L ++ I N+ E VP+ Sbjct: 60 KKIGKLKASKQEEEAKKLMESTDEIKKRLAAKEVEVQEAKSTLDAKVTTIGNIVHESVPV 119 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N ++R+ G+K +L + H ++ L ++ ++ ++G R L L Sbjct: 120 SDDEANNKIVRTFGEKRVEDNL-KNHVDLCRMLDIVALEKGADVAGGRGFYLKDEGVLLN 178 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 AL F + + G+ + P +R E M Q+ +F ++++ T + ++LI TS Sbjct: 179 LALINFGLAF-LRKRGFKPMQTPFFMRKETMAKCAQLAQFDEELYKVTGDGEDKYLIATS 237 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+++ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 238 EQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSP 297 Query: 293 E--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 DS+ HE ML +E+ K + L Y+VVS+ +G L +A K YDLE W +RE+ Sbjct: 298 NGNDSWEIHEEMLKNSEDFYKEIGLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTFREL 357 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C +F RR+ Y + + +S +F H LN + A R L ILEN+ DG Sbjct: 358 VSCSNCTDFSQRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKEDGR-R 416 Query: 409 IPTVLRPYMNNLAVIKKEHILE 430 + L+PYM + + + L+ Sbjct: 417 VKGTLQPYMGGIEFLPFKQPLD 438 >gi|145509547|ref|XP_001440712.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124407940|emb|CAK73315.1| unnamed protein product [Paramecium tetraurelia] Length = 451 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 129/439 (29%), Positives = 213/439 (48%), Gaps = 19/439 (4%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI +R+ NP + +KR +P + +++LD++ R ++ + + Sbjct: 3 LDINLLREDKGGNPNLVKEWCQKRFQDPAIVDKVIALDQEWRKARFNLDQLNKEYGIANK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I + T+ ++ +K E E L + ++ I NV E VP+ Sbjct: 63 KIAEKKKANKQDPCVEEVELAKTIDLKIKEAQKIEQEQEIVLTQTLNKIGNVVHESVPVS 122 Query: 117 TSANENILIRSVGKKP----SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 EN + + G+ P ++ H E+ + +D R +K++G R L G Sbjct: 123 KDEAENRIEVTWGQIPDIQVNSTPGRCHHHEVLFMIDGVDLKRGSKIAGHRAYFLKGPGL 182 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L +AL + I ++ GYT V P ++ M T Q+ F D ++ + + Sbjct: 183 LLNQALVSYGIQF-LNQRGYTPVQTPFFMKKTCMAETAQLSDFDDQLYKVTGNPDDEDLY 241 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE ++ +Y E +E K LP+++ + FR EAG+ G+D G+ R HQF K E Sbjct: 242 LIATSEQPISAMYRKEWLEPKDLPIKYGGSSTCFRKEAGAYGKDVWGIFRVHQFEKIEQF 301 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 I E+S+ H+ M++ ++ +K L+L YRVV++ +G L +A K YDLE W G Y Sbjct: 302 VICSPEESWKFHDEMITAGQDFVKSLELPYRVVNIVSGALNDAAAKKYDLEAWFPGYKDY 361 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 RE+ SCS C ++QSR + R+ + + K K+ H LN + A R L ILENY G Sbjct: 362 RELQSCSNCLDYQSRALEIRFGAKKTDEKEKKYVHMLNATLCATERTLCCILENYQTETG 421 Query: 406 SVTIPTVLRPYMNNLAVIK 424 V +P VL+P++ I Sbjct: 422 -VKVPVVLQPFV-GKDFIP 438 >gi|298709359|emb|CBJ31293.1| conserved unknown protein [Ectocarpus siliculosus] Length = 689 Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 121/438 (27%), Positives = 209/438 (47%), Gaps = 15/438 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 LDI R+ P+ + + ++R + + ++ LD K R +I+ + RN ++ + Sbjct: 3 LDINMFRREPDLIRESQRRRFQPVEIVDEVIDLDTKWRESRSRIDFLNKDRNRYQKEVTK 62 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G +A + + +++ I+E + E+ + KL+ I N+ ++VP+ Sbjct: 63 AKKAGGEDPENA--AKIKEVAKEVKIVEAKMVELSQQVSKLLPKIGNIVADDVPVSNDEE 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ + S H E+ +G + +R ++G R L L +AL Sbjct: 121 KDNKVVSTFGPTPTGEKYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALIN 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSL 236 + I + Y+ + P + + M G Q+ +F ++++ T+ ++LI TSE + Sbjct: 181 YGIAF-LRKRNYSVLQPPYFMSKDVMAGVAQLEQFDEELYKVSGSGTEEKYLIATSEQPI 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--ED 294 + E + LPLR+ ++ FR EAG+ G+DT G+ R HQF K E I E Sbjct: 240 CAFHKGEWLGESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEK 299 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S M +EE + L + YRVV++ +G+L +A K YDLE W +RE+ SCS Sbjct: 300 SAAMQVEMSKASEEFYQSLGISYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCS 359 Query: 355 TCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 C ++QSR M R ++ KF H LN + A R + ILENY G VT+P V Sbjct: 360 NCTDYQSRGMEVRSGHKKMGQVEKKFVHMLNSTLCATTRTMSCILENYQTPTG-VTVPEV 418 Query: 413 LRPYMNNLAVIKKEHILE 430 L P+M + + +++ E Sbjct: 419 LVPFMGGITFL--DYVKE 434 >gi|295698414|ref|YP_003603069.1| seryl-tRNA synthetase [Candidatus Riesia pediculicola USDA] gi|291157080|gb|ADD79525.1| seryl-tRNA synthetase [Candidatus Riesia pediculicola USDA] Length = 438 Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 169/432 (39%), Positives = 247/432 (57%), Gaps = 11/432 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + E ++ L +R E I+ L ++ +IL +I +R +RN S IG Sbjct: 1 MLDSKKFFSKLEDVEQRLSERGFILNREEIIKLKKEEKILETEINSLRIKRNLISKTIGI 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +K + + E+L + + S ++++ S IPN+P + + Sbjct: 61 EKRISKNVNILHIKAK--KISEELSCKALKLKTIKSKIREIFSEIPNLPEKHILSSNRKK 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++I I+ GKK + H E+ + +DF A K+S ++FSV++G LA L RAL Q Sbjct: 119 DDIEIKRWGKKRRFNFKIKNHIELTKKNKNIDFAIAAKISKSKFSVISGSLARLYRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPT 231 FMIDLH +HGY EV P +V +++Y TG +PKF +D+F + +L+PT Sbjct: 179 FMIDLHVDQHGYYEVLVPYIVNYQSLYHTGHLPKFMNDLFSIKLNKNLKENHEDYFLVPT 238 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 EV + NL +I +SLP++ + FR EAGS G+ TRG++R HQF K ELV I + Sbjct: 239 GEVPMVNLVQDKIFSYESLPIKLISNTACFRLEAGSYGKKTRGLIRSHQFDKVELVQIVQ 298 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E S T E + S AE+IL+ L L YR + L + +LGFS+ KTYDLEVW Q Y EIS Sbjct: 299 PEKSRTALEELTSHAEKILELLKLPYRKLILHSENLGFSSSKTYDLEVWFPSQKKYIEIS 358 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS +FQSRRMN++++ N +S + H LNGSG+ +GR + AILENY DGS+ IP Sbjct: 359 SCSNTTDFQSRRMNTKFKKGNDRSKQLVHILNGSGLPIGRTMAAILENYQMCDGSIKIPE 418 Query: 412 VLRPYMNNLAVI 423 +L+ YMN L I Sbjct: 419 ILKRYMNELDQI 430 >gi|308806914|ref|XP_003080768.1| SYS_HELAN Seryl-tRNA synthetase (ISS) [Ostreococcus tauri] gi|116059229|emb|CAL54936.1| SYS_HELAN Seryl-tRNA synthetase (ISS) [Ostreococcus tauri] Length = 624 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 116/441 (26%), Positives = 209/441 (47%), Gaps = 20/441 (4%) Query: 1 MLDIQWIRQNP--------EHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARR 51 MLD+ +R + + + + ++R+ +P+ + +L+LD + R +++ I Sbjct: 1 MLDVNLLRPDKGGDPVRSDDVVRESERRRYRKPEGVDDVLTLDLEWRDARHELDRIGGEF 60 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 N + ++ + G L + E+ + E E + + + + N+ + Sbjct: 61 NKANKEVALLMKAGKKDEAAPLMEIVKEIDERRKACAEREKEAEAKMTTALLKLGNIVHD 120 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 VPI + + N + R G + H ++ L + D ++ T+++G R L G Sbjct: 121 SVPIDDNEDNNKVERVWG-EKRMEENLPNHVDLIAMLDIADTEQGTEVAGGRGYYLKGAG 179 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWL 228 A L +AL + + S G+T ++ P +R + M Q+ F + ++ T + ++L Sbjct: 180 ALLNQALINYALAF-LSSRGHTPLATPFFMRQDRMAECAQLADFDEQLYKVTGEGEDKYL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 I TSE + + + + LP+R + FR E GS GRDT G+ R HQF K E Sbjct: 239 IATSEQTCCSYLRKRWLNTNQLPIRLAGYSTCFRKEVGSHGRDTLGIFRVHQFEKVEQFV 298 Query: 289 ITREE--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 E S+ E +RM+ +E + L++ Y+VV++ +G L +A K +DLE W Sbjct: 299 AVSGEGDASWKEMDRMIGNSEAFYQSLNIPYQVVNIVSGALNDAAAKKFDLEAWFPSSRT 358 Query: 347 YREISSCSTCGNFQSRRMNSRY---RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 +RE+ SCS C ++QSRR+ R + K + H LN + A R L ++EN+ Sbjct: 359 FRELVSCSNCLDYQSRRLEIREGAPKKGPEKVKAYVHLLNSTLTATERTLCCVIENWQTP 418 Query: 404 DGSVTIPTVLRPYMNNLAVIK 424 +G V +P LRP+MN + I Sbjct: 419 EGLV-VPPALRPWMNGIEFIP 438 >gi|325190580|emb|CCA25077.1| unnamed protein product [Albugo laibachii Nc14] Length = 454 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 135/432 (31%), Positives = 217/432 (50%), Gaps = 14/432 (3%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +DI +R +PE + +KR + +L+LDE+ R ++E ++ N+ Sbjct: 3 IDINRLRIERGGDPEKVKEDQRKRFASVDLVDDVLALDEQWRKKQGQVETMQMNVNTIQT 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I + + E L Q+P L+K+ + + + ++ I N VPI Sbjct: 63 KIKELSKAKK--DFKDISEERKNLAAQIPGLKKDADALREQVDRKLATIANTVDPSVPIS 120 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + ++N +++ GK S L H E+ + + +R +++G R LTG+ LE+ Sbjct: 121 QNEDDNQIVKEWGKVSSKEELLFHH-EVLHRIDGYEPERGVQVAGHRAYFLTGYGLLLEQ 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEV 234 AL Q+ + Y + P + + M G Q+ F + ++ D ++LI TSE Sbjct: 180 ALLQYASAF-LMQRQYKMIKPPFFINKDIMAGVAQLDDFDEQLYKVEGDDEKYLIATSEQ 238 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 L + + I+ SLPLR+ L+ FR E+GS G+DT G+ R HQF K E IT E+ Sbjct: 239 PLCGYHKGDWIQESSLPLRYGGLSTCFRKESGSHGKDTWGIFRVHQFDKVEQFCITEPEN 298 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S HE ML AE+ + L+L YRVV++ +G+L +A K YDLE W N YRE+ SCS Sbjct: 299 STEMHEEMLKHAEDFYQSLNLSYRVVNIVSGELNNAAVKKYDLEAWFPAYNEYRELVSCS 358 Query: 355 TCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 C ++Q+R M R + N + K+ H LN + A R + ILEN + +G V +P V Sbjct: 359 NCTDYQARAMEIRCGIKKENQREKKYVHMLNSTLCASTRTVCCILENNQDENG-VKVPHV 417 Query: 413 LRPYMNNLAVIK 424 L P+M + I Sbjct: 418 LVPFMGGVTFIP 429 >gi|203287683|ref|YP_002222698.1| seryl-tRNA synthetase [Borrelia recurrentis A1] gi|238690587|sp|B5RR43|SYS_BORRA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|201084903|gb|ACH94477.1| seryl-tRNA synthetase [Borrelia recurrentis A1] Length = 424 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 146/432 (33%), Positives = 227/432 (52%), Gaps = 13/432 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N E + +K R L+ + + ++S D++ R LI KI ++ A RN N+ Sbjct: 1 MLDLKFIRDNLELVRENIKNRGLKLELDLLISFDDERRKLITKIGELNALRNENA---NA 57 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 S L + LK ++ LE+ + S L IPN+ +VP+G S + Sbjct: 58 MKDNIGDSSRHYLIEKGKALKAEIMDLEERLGYLTSRLLVEHKRIPNISAPDVPVGVSED 117 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN++++ G P ++H EIG L L DF++A ++SG +F L LE A+ Sbjct: 118 ENVVLKVSGNIPKFDFKPKDHLEIGIHLDLFDFEKAREVSGNKFYYLKNEAVFLELAMIN 177 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F G+ P + R+ + G G P+ A+ ++L+ T+E++L Sbjct: 178 FAFS-KLKAKGFDLFITPDVAREFIVDGIGFNPRGAESNIYKIEDTDKYLVGTAEITLGG 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y + I++ KS PL+ L+ FR EAG+AG+ ++G+ R HQF K E+ R EDS Sbjct: 237 YYYNTILDLKS-PLKMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCFCRSEDSDRI 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCST 355 H L EEI L++ YRV+++C+ DLG A K YD+E W+ G+ Y E++S S Sbjct: 296 HNEFLELEEEIFIELEIPYRVLNVCSSDLGAPAYKKYDIEAWMPGRGENGDYGEVTSTSN 355 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+ KF H +NG+ +A R LIAILEN+ +A G V IP L Sbjct: 356 CTDYQSRRLKIRYK--EDGQNKFVHMINGTAIASTRTLIAILENFQDAKGGVRIPKSLVK 413 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 414 YT-GFDYISPKN 424 >gi|299140776|ref|ZP_07033914.1| serine--tRNA ligase [Prevotella oris C735] gi|298577742|gb|EFI49610.1| serine--tRNA ligase [Prevotella oris C735] Length = 430 Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats. Identities = 141/423 (33%), Positives = 231/423 (54%), Gaps = 7/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H E E +L D+ R +K++ + ++N + Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFEGAREAVEKVLEYDKIRREAQQKLDSNKQQQNQLAKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + +KN + LK L++ + + + + IPN+P + VP G Sbjct: 61 IGGLMKEGKKEEAEKIKNTVAELKATDKALQEIMDKAQGDMTQTLLDIPNIPNDRVPEGK 120 Query: 118 SANENILIR-SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 A+ N++I+ + P + H+++ + L++FD K++GA F V G +A +R Sbjct: 121 DASSNVVIKEDITNMPQLGDDALCHWDLLKKYNLVNFDLGVKITGAGFPVYIGKMARFQR 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL F +D + GY E+ P +V + + GTGQ+P M+ D +LIPT+EV Sbjct: 181 ALEAFFLDE-ARKSGYVEIQPPYVVNEASGLGTGQLPDKEGQMYHANLDNLFLIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TN++ EI++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I E S Sbjct: 240 VTNIFRDEILDEKDLPIKHCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPEHS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + + ML E +LK+L+L Y ++ LC GD+ F++ D E + A Q+ + E+SS S Sbjct: 300 YQSWQEMLDHVEGLLKKLELPYHLLLLCGGDMSFTSSICVDFETYSAAQHRWLEVSSVSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+ R++ RYR K ++ HTLNGS +A+ R + ILEN G + +P VL P Sbjct: 360 FESYQANRLHCRYRHAEDKKIELCHTLNGSALALPRIVATILENNQTPQG-IRVPKVLVP 418 Query: 416 YMN 418 Y Sbjct: 419 YCG 421 >gi|67469401|ref|XP_650679.1| seryl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS] gi|56467329|gb|EAL45293.1| seryl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS] Length = 453 Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats. Identities = 131/437 (29%), Positives = 209/437 (47%), Gaps = 19/437 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 LDI R P+ + + KKR + + IL+LD + + ++ R ++G Sbjct: 3 LDINLFRNQPDVIKESQKKRGASVEIVDEILALDNEWKKEGFTLDQTRKELGKIQKELGM 62 Query: 61 AIAEGNLSLVDALKNETSTLKE----QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + E K+ ++ LEK E+ + I + N+ + VP+ Sbjct: 63 LHKNKENPPTKEVLAEYDVKKKACESKIAELEKSVSELKVKIDAKIKSVGNIVPDSVPVE 122 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 N + + G+ ++ E +G D +RA K++G R L G L + Sbjct: 123 MDEKFNKIEVTYGECTPKLYHHHELIH---MIGGADTERAVKVAGHRGYYLKGWGFKLNQ 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWL 228 AL + + + G+T + P +R E M T Q+ F + ++ D ++L Sbjct: 180 ALINYGTNF-LEQRGFTPIQTPYFMRRELMAKTAQLSDFDETLYHVGTGKDVELDDQKYL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 I TSE LT L++ E I K LP+R+ + +FR EAG+ G+DT G+ R HQF K E Sbjct: 239 IATSEQPLTALHAGEWILPKQLPIRYMGFSTNFRKEAGAHGKDTWGIFRVHQFEKIEQFC 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 +T + S+ HE M+ + + + L + YRVV++ +G L +A K YDLE + G N YR Sbjct: 299 MTLPDKSWEMHEEMIKNSRDFFESLKIPYRVVNIVSGALNNAAAKKYDLEGYFPGFNEYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYR-DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 E+ SCS C ++QSR + R + D K+ + H LN + A R L ILENY DG + Sbjct: 359 ELVSCSNCTDYQSRELEVRLQTDKKDKTKSYVHMLNSTLCATERALCCILENYQCEDG-I 417 Query: 408 TIPTVLRPYMNNLAVIK 424 +P VLRPY+ + I Sbjct: 418 IVPEVLRPYVGGVEKIP 434 >gi|167392442|ref|XP_001740156.1| seryl-tRNA synthetase [Entamoeba dispar SAW760] gi|165895834|gb|EDR23423.1| seryl-tRNA synthetase, putative [Entamoeba dispar SAW760] Length = 453 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 132/437 (30%), Positives = 209/437 (47%), Gaps = 19/437 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 LDI R P+ + + KKR + + ILSLD + + ++ R ++G Sbjct: 3 LDINLFRNQPDVIRESQKKRGAPVEIVDEILSLDNEWKKEGFTLDQTRKELGKIQKELGM 62 Query: 61 AIAEGNLSLVDALKNETSTLKE----QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + E K+ ++ LEK E+ + I + N+ + VP+ Sbjct: 63 LHKNKENPPTKEILAEYDIKKKACETKITELEKSVVELKVKINDKIKSVGNIVPDSVPVE 122 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 N + + G+ ++ E +G D +RA K++G R L G L + Sbjct: 123 MDEKFNKVEVTYGECTPKVYHHHELIH---MIGGADTERAVKVAGHRGYYLKGWGFKLNQ 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWL 228 AL + + + G+T + P +R E M T Q+ F + ++ D ++L Sbjct: 180 ALINYSTNF-LEQRGFTPIQTPYFMRRELMAKTAQLSDFDETLYHVGTGKDVELDDQKYL 238 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 I TSE LT L++ E I K LP+++ + +FR EAG+ G+DT G+ R HQF K E Sbjct: 239 IATSEQPLTALHAGEWILPKQLPIKYMGFSTNFRKEAGAHGKDTWGIFRVHQFEKIEQFC 298 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 +T + S+ HE M+ A + + L + YRVV++ +G L +A K YDLE + G N YR Sbjct: 299 MTLPDKSWEMHEEMIKNARDFFESLKIPYRVVNIVSGALNNAAAKKYDLEGYFPGFNEYR 358 Query: 349 EISSCSTCGNFQSRRMNSRYR-DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 E+ SCS C ++QSR + R + D K+ + H LN + A R L ILENY DG + Sbjct: 359 ELVSCSNCTDYQSRELEVRLQTDKKDKTKSYVHMLNSTLCATERALCCILENYQCEDG-I 417 Query: 408 TIPTVLRPYMNNLAVIK 424 +P VLRPY+ + I Sbjct: 418 IVPEVLRPYVGGVEKIP 434 >gi|54020355|ref|YP_115642.1| seryl-tRNA synthetase [Mycoplasma hyopneumoniae 232] gi|53987528|gb|AAV27729.1| seryl-tRNA synthetase [Mycoplasma hyopneumoniae 232] gi|144227531|gb|AAZ44334.2| seryl-tRNA synthetase [Mycoplasma hyopneumoniae J] Length = 413 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 174/419 (41%), Positives = 247/419 (58%), Gaps = 12/419 (2%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLD---EKNRILIKKIEDIRARRNSNSAQIG 59 +I+ I N ++ L R + I L +K IL +KI+ + A++N S +IG Sbjct: 2 NIRLILNNKSFVEKKLATRGFDISI--INELYIKGQKRNILRQKIDALLAKKNLISKEIG 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + S LK++ S +K ++ LE E +++ + L + I IPN+P + VP GTS Sbjct: 60 AFSRQEKDSSF--LKSQVSKIKTEIETLEAEWYQLDTWLNQKILEIPNLPDDSVPFGTSE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N +I G + H+E G + ++DF RA K+SG RF + A L R+L Sbjct: 118 LDNQVISHWGIPKKFDQKCKPHYEFGISNKILDFKRAVKISGNRFVIYKNLGAKLVRSLI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FMID H + Y E+ L+ E++YGTGQ+PKF +D++ RWLIPT+EV LTN Sbjct: 178 NFMIDTHI-ANDYQEIIPNTLILSESLYGTGQLPKFHNDLYPLKDPNRWLIPTAEVPLTN 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ P+ + +RSEAGS GRDT+G++R H+F K ELV IT+E D TE Sbjct: 237 YFREEIIDLAK-PISLVGYSKCYRSEAGSGGRDTKGLIRLHEFHKVELVKITKEADGLTE 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E ++ A ILK L++ +RVV L T DLGFS+ KT DLE WL +N YRE+SS S CG+ Sbjct: 296 FENVVKDASRILKLLEIPFRVVVLSTYDLGFSSKKTVDLEAWLPSENTYREVSSISYCGD 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RYRD K+ + HT+NGSG+A+ R + +LE Y N DGS T+P VL PY Sbjct: 356 FQARRAKIRYRD--GKNNHYAHTINGSGLAIDRLVAILLEQYQNLDGSWTVPKVLEPYF 412 >gi|28950357|emb|CAD70981.1| probable serine-tRNA ligase, cytosolic [Neurospora crassa] Length = 465 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 126/445 (28%), Positives = 211/445 (47%), Gaps = 19/445 (4%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ +I + NPE + + +KR + + +++L E +R + A+ N Sbjct: 1 MLDVNDFIAERGGNPEKIRESQRKRFAPVEVVDEVIALWEDHRKTAYSAMQLNAKINEVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QI V L + + L+++ L E LK + I N+ + VP+ Sbjct: 61 KQIAPKKKA--KEDVSDLLKQKADLEKEKKDLLDSAAEKEKLLKVKVKTIGNLVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N + R+ + A H E+ L D +R K+ G R L Sbjct: 119 SNNEDNNTVERTWAPEGVAFEKKDVLSHHEVLRKLDGYDPERGVKVVGHRGYFLKKWGVF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR---WLIP 230 L +A+ + ++ SE YT + P L+ + M T Q+ +F ++++ T + +LI Sbjct: 179 LNQAIINYGLEF-LSEREYTPLQTPQLMLRDQMAKTAQLSQFDEELYKVTGDQADKYLIA 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 TSE ++ +S E +++K LPL++ + FR EAG+ G+D G+ R H+F K E IT Sbjct: 238 TSEQPISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKVEQFCIT 297 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E S+ E M+S +E + L + YRVV++ +G L +A K DLE W Q ++E+ Sbjct: 298 EPEKSWEMFEHMISNSEAFYQSLGIPYRVVAIVSGALNNAAAKKLDLEAWFPHQGEFKEL 357 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C ++QSR + R+ + + H LN + A R + AILEN+ +G V Sbjct: 358 VSCSNCTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAILENFQTPEG-VK 416 Query: 409 IPTVLRPYMNNL-AVIK--KEHILE 430 +P LR Y+ I E + E Sbjct: 417 VPEPLRKYLPGAPEFIPFAPEPVKE 441 >gi|321262679|ref|XP_003196058.1| serine-tRNA ligase [Cryptococcus gattii WM276] gi|317462533|gb|ADV24271.1| Serine-tRNA ligase, putative [Cryptococcus gattii WM276] Length = 461 Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats. Identities = 119/445 (26%), Positives = 209/445 (46%), Gaps = 25/445 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 M+D+ ++ NP+ + + KKR + + ++++ +++ ++E+ + N Sbjct: 1 MIDLIHLQADKGGNPDIVRESQKKRGASVELVDEVIAIFAEHKNANYEMENAKRELNLLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IGQ L + + + +++ + ++ + I N+ + + Sbjct: 61 KEIGQIKKAKG--DATELLAKKADMDKKIAEMTTRVADLIKKRDQKAGQIGNIVDPQNHV 118 Query: 116 GTSANENILIRSVGKKPSA------------IHLSREHFEIGEALGLMDFDRATKLSGAR 163 S ++N ++R +P+ H E+ L D DR K+ G R Sbjct: 119 SLSEDDNPVLRLWHPEPNHKGNSQLLDESDKPEGIISHHEVLARLEAYDTDRGVKVFGHR 178 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 LT L +AL + +D + G+ +V P +++ E M T Q+ F + ++ + Sbjct: 179 GFYLTNDGVDLNQALINYGLDF-LRKKGFRKVQPPFMIKKEIMGATAQLEDFDEALYKVS 237 Query: 224 ---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 + +LI TSE ++ + E ++ K+LPL + + FR EAGS GRDT G+ R HQ Sbjct: 238 GGAEDMYLIATSEQPISAYHMDENLDPKNLPLHYAGYSTCFRKEAGSHGRDTWGIFRVHQ 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E + E S E + M++ A E + L + YR+V++ +G L +A YDLE W Sbjct: 298 FEKVEQFVVCEPEASPAELDSMVANAREFYESLGIPYRLVNIVSGGLNNAAAIKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYR-DPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 Q Y+E+ SCS C ++QSR +N R K F H LNG+ A R L ++EN Sbjct: 358 FPYQGEYKELVSCSNCTDYQSRSLNVRLGFKEKDKKTGFVHMLNGTLCATERALCCLVEN 417 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIK 424 Y +G + IP VL+PYM + Sbjct: 418 YQTPEG-LRIPKVLQPYMQGRDFLP 441 >gi|161511500|ref|NP_853504.2| seryl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|46577176|sp|Q7NAD6|SYS_MYCGA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|284812299|gb|AAP57072.2| Seryl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|284931004|gb|ADC30943.1| Seryl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)] Length = 420 Score = 325 bits (834), Expect = 6e-87, Method: Composition-based stats. Identities = 165/426 (38%), Positives = 241/426 (56%), Gaps = 8/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD ++ N + + LK R + L L+++ L++ IE + ++N N+ Sbjct: 1 MLDKNLLKTNSKEIREQLKSRSFNLDWYDEFLRLEKQLSTLLRTIEKLNEQKNINAK--- 57 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + + L E L+ +L E + +E+ + IPN+P E+VPIG Sbjct: 58 KAATTESDAQRKKLIQEGGLLRAELEKNEAKYNEIKEDFDYIYQRIPNLPTEDVPIGKDE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ + K H+E+ L ++ D A+K++G+RFS+ A L RA+ Sbjct: 118 KENVEMFKSRKPTFFDFKPLPHYELATKLEMIGLDVASKITGSRFSIYKKDGARLMRAIQ 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 QF + + + Y E P++V ++ YG+GQ PKF +D+F +L T+EV L N Sbjct: 178 QFCL--YVNADKYEEYLPPVIVNKDSYYGSGQFPKFVEDVFKLEGTNYYLASTAEVQLVN 235 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ +EI++ LP +T FRSEAGSAG+DT+G++RQHQF+K ELV I S E Sbjct: 236 LHRNEILKEADLPKYYTASTACFRSEAGSAGKDTKGLIRQHQFYKTELVKIVHPSTSKQE 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE M AE+IL+ L+L YR + LCTGD+GFSA KTYDLEVW+ +N YREISS S CG+ Sbjct: 296 HEAMAKDAEKILELLELPYRRMVLCTGDMGFSATKTYDLEVWIPSENKYREISSISNCGD 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR N +++D SK + HTLN S +A R +AI+ENY DGS+ IP L Y Sbjct: 356 FQARRANIKFKDAISKKNLYVHTLNASALAHDRLFVAIVENYQQKDGSIKIPKALVKYF- 414 Query: 419 NLAVIK 424 IK Sbjct: 415 GKEYIK 420 >gi|302539429|ref|ZP_07291771.1| seryl-tRNA synthetase [Streptomyces sp. C] gi|302448324|gb|EFL20140.1| seryl-tRNA synthetase [Streptomyces sp. C] Length = 425 Score = 325 bits (834), Expect = 6e-87, Method: Composition-based stats. Identities = 189/430 (43%), Positives = 250/430 (58%), Gaps = 15/430 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D + Q E L +R + L E+ LI + + +RA +N ++ Sbjct: 1 MHDPHSLLQ--EASGAGLARRGHVLDRAALRDLTEQRARLIAERDKLRAEQNRSAK---- 54 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + DA + T+ KE+L + +E E L L+ +PN+P +VP GT + Sbjct: 55 ----GGVRPDDAARARTAAAKERLRSVSEELREAEEGLAALLLAVPNLPHPDVPDGTEQD 110 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ R+ G+ P R+H +IG LG++D RA +LSG+RF+V G A LERAL Sbjct: 111 PPVVRRTWGEVPGFEFTPRDHVDIGTRLGILDQVRAARLSGSRFAVTRGAGARLERALAA 170 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 F++DLHT+EHGYTE P LV E M GTGQ+PKF DD+F T LIPT+EV L Sbjct: 171 FLLDLHTTEHGYTEHGVPHLVTRETMTGTGQLPKFEDDLFLTGAADRDLLLIPTAEVPLV 230 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NLY E + LPL T P +R+EAGS GRDTRG++R HQF K ELV I R ED+ Sbjct: 231 NLYRGETLREDGLPLALTACTPCYRAEAGSYGRDTRGLVRLHQFEKVELVRICRPEDAAA 290 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E + AE L+RL L +RVV L GDLGF+A +TYD+EVWL GQ YREISSCS CG Sbjct: 291 ELELLTGHAEAALRRLGLAHRVVELRAGDLGFAARRTYDIEVWLPGQGTYREISSCSDCG 350 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ RR + RD + + +F TLNGS + VGR L+A+LE Y ADGSV +P L PY Sbjct: 351 DFQGRRAGIKVRDRDGRK-RFAATLNGSALPVGRTLVAVLEQYQRADGSVAVPPALVPYT 409 Query: 418 NNLAVIKKEH 427 + I + Sbjct: 410 -GFSAIAPDG 418 >gi|28493693|ref|NP_787854.1| seryl-tRNA synthetase [Tropheryma whipplei str. Twist] gi|46577233|sp|Q83FJ7|SYS_TROWT RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|28476735|gb|AAO44823.1| seryl-tRNA synthetase [Tropheryma whipplei str. Twist] Length = 417 Score = 325 bits (834), Expect = 7e-87, Method: Composition-based stats. Identities = 147/430 (34%), Positives = 231/430 (53%), Gaps = 18/430 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKI---EDIRARRNSNS 55 M+D + + P+ + ++ KKR + +++ R L I E +RA +N S Sbjct: 1 MIDPEILVNTPDIVRLSQKKRGESQSIVEDALIA----RRNLRTAINNFETLRAEQNVLS 56 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +I + S L + L E++ +E+ + S KKL+ IPN+ E P Sbjct: 57 KKIAGS----EDSDRPELMRVANLLAERVKNAREEQEKANSEWKKLLFEIPNIVSSEAPY 112 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G + +++VG P +H ++GE L +D R K+SG RF L G A LE Sbjct: 113 GVEDKCAV-MKTVGDIPEFDFEPADHLQLGEQLDAIDVSRGVKVSGTRFYFLKGWGARLE 171 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVS 235 A+ +DL G T + P LV+ E M GTG + + +++ G +L TSEV+ Sbjct: 172 LAVMNLALDLALKS-GLTLLITPTLVKPEIMLGTGFLGRHEGEVYRLPSGYYLTGTSEVA 230 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 + +S EI++ S P+R+ + +R EAGS GRDTRG++R HQF K E+ S + S Sbjct: 231 IAGYHSDEILDISSGPIRYAGWSSCYRREAGSHGRDTRGIMRVHQFSKLEMFSYVHPQQS 290 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 E E ++S E++L L++ YRV + +LG SA + YDLE W+ QN +RE++S S Sbjct: 291 TRELEHIVSMQEKMLNLLEIPYRVSDIAAEELGTSASRKYDLEAWIPSQNTWREVTSASD 350 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+N RYRD + + + TLNG+ +A R L+AILEN+ ++GS+ +P LRP Sbjct: 351 CTTFQARRLNVRYRDESGR-TGYVATLNGT-LATTRFLVAILENHQTSNGSIRVPEALRP 408 Query: 416 YMNNLAVIKK 425 + VI++ Sbjct: 409 LL-GQDVIER 417 >gi|332796823|ref|YP_004458323.1| seryl-tRNA synthetase [Acidianus hospitalis W1] gi|332694558|gb|AEE94025.1| seryl-tRNA synthetase [Acidianus hospitalis W1] Length = 455 Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats. Identities = 148/449 (32%), Positives = 237/449 (52%), Gaps = 29/449 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ IR NP+ L +LKKR+++ + LD+K R +++++E +R + N ++QI + Sbjct: 6 LELIRNNPDELIDSLKKRNMDTSLALKAVELDKKWRSILQEVEKLRHQHNEINSQIPKLK 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E + ++ E L + L EKE E+ +++ +PN+ +VP+G N Sbjct: 66 PEERKAKIE----EAKKLLQILEAKEKELKEIEEQRDEILRSLPNIISPDVPVGPDDTYN 121 Query: 123 ILIRSVGKKPSAIHLSREHFE----------------------IGEALGLMDFDRATKLS 160 + I+ GK E + + L L + ++A++++ Sbjct: 122 VPIKFWGKFKVYEKDLEEFKKQLNGAQVEYEIINWKLVGHADMLENVLKLGNTEKASQVA 181 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G+RF L L L+ AL + ID T GY V P ++R E ++ + F D ++ Sbjct: 182 GSRFYYLFDDLVWLDFALLLYAIDTMT-SKGYRLVLPPYMLRGEVIHAVIDLDTFKDAIY 240 Query: 221 CT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 D +LI T+E L LY E IE + LP++ ++P+FR EAG+A +D +G+ R H Sbjct: 241 KIENDDLYLIATAEHPLAALYYKEDIEKEELPIKLVGISPAFRREAGAANKDLKGIFRVH 300 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + EDS+ H+ +LS AEEI + L + YR+V++ +GDLG A K YDLE Sbjct: 301 QFHKVEQFIFSLPEDSWKYHQELLSNAEEIFQGLGIPYRIVNIASGDLGACAAKKYDLEA 360 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q +RE+ SCS C ++Q+ RM RY D + + HTLN + VA R + AILEN Sbjct: 361 WMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKKGYVHTLNSTAVASTRTITAILEN 420 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 + N DG+V IP VLR Y+ K++I Sbjct: 421 FQNEDGTVEIPKVLRKYLEPFKAAPKDYI 449 >gi|58265976|ref|XP_570144.1| serine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21] gi|134110422|ref|XP_776038.1| hypothetical protein CNBD0870 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258706|gb|EAL21391.1| hypothetical protein CNBD0870 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226377|gb|AAW42837.1| serine-tRNA ligase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 461 Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats. Identities = 117/445 (26%), Positives = 209/445 (46%), Gaps = 25/445 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 M+D+ ++ NP+ + + KKR + + ++++ +++ ++E+ + N Sbjct: 1 MIDLIHLQADKGGNPDIVRESQKKRGASVELVDEVIAIFAEHKNANYEMENAKRELNLLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IGQ L + + + +++ + ++ + I N+ + + Sbjct: 61 KEIGQIKKAKG--DATELLAKKADMDKKIAEMTTRVADLIKKRDQKAGQIGNIVDPQNHV 118 Query: 116 GTSANENILIRSVGKKPSA------------IHLSREHFEIGEALGLMDFDRATKLSGAR 163 + ++N ++R +P+ H E+ L D DR K+ G R Sbjct: 119 SLTEDDNPVLRLWHPEPNHKGNSQLLDQSDKPEGIISHHEVLARLEAYDTDRGVKVFGHR 178 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 LT L +AL + +D + G+ +V P +++ E M T Q+ F + ++ + Sbjct: 179 GFYLTNDGVDLNQALINYGLDF-LRKKGFKKVQPPFMIKKEIMGATAQLEDFDEALYKVS 237 Query: 224 ---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 + +LI TSE ++ + E ++ K+LPL + + FR EAGS GRDT G+ R HQ Sbjct: 238 GGAEDMYLIATSEQPISAYHMDENLDPKNLPLHYAGYSTCFRKEAGSHGRDTWGIFRVHQ 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E + E S E + M++ + E + L + YR+V++ +G L +A YDLE W Sbjct: 298 FEKVEQFVVCEPEASPAELDAMVANSREFYESLGIPYRLVNIVSGGLNNAAAIKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYR-DPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 Q Y+E+ SCS C ++QSR +N R K F H LNG+ A R L ++EN Sbjct: 358 FPYQGEYKELVSCSNCTDYQSRSLNVRLGFKEKDKKTGFVHMLNGTLCATERALCCLVEN 417 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIK 424 Y +G + IP VL+PYM + Sbjct: 418 YQTPEG-LRIPKVLQPYMQGRDFLP 441 >gi|312601226|gb|ADQ90481.1| Seryl-tRNA synthetase [Mycoplasma hyopneumoniae 168] Length = 413 Score = 325 bits (833), Expect = 9e-87, Method: Composition-based stats. Identities = 173/419 (41%), Positives = 246/419 (58%), Gaps = 12/419 (2%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLD---EKNRILIKKIEDIRARRNSNSAQIG 59 +I+ I N ++ L R + I L +K IL +KI+ + A++N S +IG Sbjct: 2 NIRLILNNKSFVEKKLATRGFDISI--INELYIKGQKRNILRQKIDALLAKKNLISKEIG 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + S LK++ S +K ++ LE E +++ + L + I IPN+P + VP GTS Sbjct: 60 AFSRQEKDSSF--LKSQVSKIKTEIETLEAEWYQLDTWLNQKILEIPNLPDDSVPFGTSE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N +I G + H+E G + ++DF RA K+SG RF + A L R+L Sbjct: 118 LDNQVISHWGIPKKFDQKCKPHYEFGISNKILDFKRAVKISGNRFVIYKNLGAKLVRSLI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FMID H + Y E+ L+ E++YGTGQ+PKF +D++ RWLIPT+EV LTN Sbjct: 178 NFMIDTHI-ANDYQEIIPNTLILSESLYGTGQLPKFHNDLYPLKDPNRWLIPTAEVPLTN 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ P+ + +RSEAGS GRDT+G++R H+F K ELV IT+E D TE Sbjct: 237 YFREEIIDLAK-PISLVGYSKCYRSEAGSGGRDTKGLIRLHEFHKVELVKITKEADGLTE 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E ++ A ILK L++ +RVV L T DLGFS+ KT DLE WL +N YRE+SS S CG+ Sbjct: 296 FENVVKDASRILKLLEIPFRVVVLSTYDLGFSSKKTVDLEAWLPSENTYREVSSISYCGD 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RYR K+ + HT+NGSG+A+ R + +LE Y N DGS T+P VL PY Sbjct: 356 FQARRAKIRYR--EGKNNHYAHTINGSGLAIDRLVAILLEQYQNLDGSWTVPKVLEPYF 412 >gi|281425678|ref|ZP_06256591.1| serine--tRNA ligase [Prevotella oris F0302] gi|281400265|gb|EFB31096.1| serine--tRNA ligase [Prevotella oris F0302] Length = 430 Score = 325 bits (833), Expect = 9e-87, Method: Composition-based stats. Identities = 141/423 (33%), Positives = 231/423 (54%), Gaps = 7/423 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML ++ I + E + L+K+H E E +L D+ R +K++ + ++N + Q Sbjct: 1 MLTLKLISEETERVIKGLEKKHFEGAREAVEKVLEYDKIRREAQQKLDSNKQQQNQLAKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IG + EG + +KN + LK L++ + + + + IPN+P + VP G Sbjct: 61 IGGLMKEGKKEEAEKIKNTVAELKATDKALQEIMDKAQGDMTQTLLDIPNIPNDRVPEGK 120 Query: 118 SANENILIR-SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 A+ N++I+ + P + H+++ + L++FD K++GA F V G +A +R Sbjct: 121 DASSNVVIKEDITNMPQLGDDALCHWDLLKKYNLVNFDLGVKITGAGFPVYIGKMARFQR 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVS 235 AL F +D + GY E+ P +V + + GTGQ+P M+ D +LIPT+EV Sbjct: 181 ALEAFFLDE-ARKSGYVEIQPPYVVNEASGLGTGQLPDKEGQMYHANLDNLFLIPTAEVP 239 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +TN++ EI++ K LP++ + FR EAGS G+D RG+ R HQF K E+V I E S Sbjct: 240 VTNIFRDEILDEKDLPIKHCAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPEHS 299 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + + ML E +LK+L+L Y ++ LC GD+ F++ D E + A Q+ + E+SS S Sbjct: 300 YQSWQEMLDHVEGLLKKLELPYHLLLLCGGDMSFTSSICVDFETYSAAQHRWLEVSSVSN 359 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+ R++ RYR K ++ HTLNGS +A+ R + ILEN G + +P VL P Sbjct: 360 FESYQANRLHCRYRHAEDKKIELCHTLNGSALALPRIVATILENNQTPQG-IRVPRVLVP 418 Query: 416 YMN 418 Y Sbjct: 419 YCG 421 >gi|144575344|gb|AAZ53625.2| seryl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] Length = 413 Score = 325 bits (833), Expect = 9e-87, Method: Composition-based stats. Identities = 173/419 (41%), Positives = 246/419 (58%), Gaps = 12/419 (2%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLD---EKNRILIKKIEDIRARRNSNSAQIG 59 +I+ I N ++ L R + I L +K IL +KI+ + A++N S +IG Sbjct: 2 NIRLILNNKSFVEKKLATRGFDISI--INELYIKGQKRNILRQKIDALLAKKNLISKEIG 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + S LK++ S +K ++ LE E +++ + L + I IPN+P + VP GTS Sbjct: 60 AFSRQEKDSSF--LKSQVSKIKTEIETLEAEWYQLDTWLNQKILEIPNLPDDSVPFGTSE 117 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N +I G + H+E G + ++DF RA K+SG RF + A L R+L Sbjct: 118 LDNQVISHWGIPKKFDQKCKPHYEFGISNKILDFKRAVKISGNRFVIYKNLGAKLVRSLI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 FMID H + Y E+ L+ E++YGTGQ+PKF +D++ RWLIPT+EV LTN Sbjct: 178 NFMIDTHV-ANDYQEIIPNTLILSESLYGTGQLPKFHNDLYPLKDPNRWLIPTAEVPLTN 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + EII+ P+ + +RSEAGS GRDT+G++R H+F K ELV IT+E D TE Sbjct: 237 YFREEIIDLAK-PISLVGYSKCYRSEAGSGGRDTKGLIRLHEFHKVELVKITKEADGLTE 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E ++ A ILK L++ +RVV L T DLGFS+ KT DLE WL +N YRE+SS S CG+ Sbjct: 296 FENVVKDASRILKLLEIPFRVVVLSTYDLGFSSKKTVDLEAWLPSENTYREVSSISYCGD 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR RYR K+ + HT+NGSG+A+ R + +LE Y N DGS T+P VL PY Sbjct: 356 FQARRAKIRYR--EGKNNHYAHTINGSGLAIDRLVAILLEQYQNLDGSWTVPKVLEPYF 412 >gi|156937780|ref|YP_001435576.1| seryl-tRNA synthetase [Ignicoccus hospitalis KIN4/I] gi|166222734|sp|A8AB67|SYS_IGNH4 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|156566764|gb|ABU82169.1| seryl-tRNA synthetase [Ignicoccus hospitalis KIN4/I] Length = 458 Score = 325 bits (833), Expect = 9e-87, Method: Composition-based stats. Identities = 141/451 (31%), Positives = 226/451 (50%), Gaps = 30/451 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R NPE L ++KKR +PQ + +DE+ R ++++E +R N + ++ +A Sbjct: 6 LEALRNNPELLIESMKKRCKDPQPVYEAIRVDEEWRKTLQEVERLRHEHNKITREVAKAK 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + + +AL + L LEK+ E+ + ++++ +PN+ VP G + N Sbjct: 66 ---DKAEREALIKKAKELLALKEELEKKLKELEAKREEILLSLPNLVHPSVPEGCDEDHN 122 Query: 123 ILIRSVGKKPSAIHLSREHFEIGEALGLM------------------------DFDRATK 158 + +R GK E + + G + +A + Sbjct: 123 VPVRFWGKPKVWKGHLEEFEKQTKRWGFEVEHEVVEEKPVGHADMLEKVLRLGNTYKAAQ 182 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 ++ +RF L L L+ AL + +D S+ G+ V P +VR + + G + F D Sbjct: 183 VASSRFYYLFKDLVWLDYALMMYAMDF-LSKKGFVLVEPPYMVRYKVLRGVIDVETFKDA 241 Query: 219 MFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 ++ + +LI TSE L EII+ LP++ ++P FR EAG+ RD +G+ R Sbjct: 242 IYKIEGEDLYLIATSEHPLAAYKMEEIIDESELPIKLAGVSPCFRKEAGAGNRDLKGIFR 301 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 HQF K E ++ EDS+ E ++ AEE++K L+L YRVV++C G+LG A K YDL Sbjct: 302 VHQFHKVEQFVFSKPEDSWEVLEELIRNAEELVKGLELPYRVVNVCGGELGSPAAKKYDL 361 Query: 338 EVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 EVW Q YRE+ S S C ++QS R+ RYR K F HTLN + +A R + AIL Sbjct: 362 EVWYPAQGKYRELVSASNCTDWQSYRLKIRYRIKGGKKHDFVHTLNSTALATTRTITAIL 421 Query: 398 ENYLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 EN+ DG V IP LR Y+ K++I Sbjct: 422 ENHQLPDGRVRIPRALRKYLEPFESAPKDYI 452 >gi|170290556|ref|YP_001737372.1| seryl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|229890221|sp|B1L5G0|SYS_KORCO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|170174636|gb|ACB07689.1| seryl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 456 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 140/450 (31%), Positives = 223/450 (49%), Gaps = 31/450 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R++PE L L++R L E + LD K R + ++ +R RRN + I +A Sbjct: 6 LEALRKDPEILRENLRRRFLPLDMLERAIELDRKWREAVTELNSLRERRNEINRSIPRA- 64 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + + L + + E++ LE ++ ++ +P + + VPIG + + N Sbjct: 65 ---DPGEREELIRKAKEIGEEIERLEDVLEKLSQERDSILMSMPALIDDSVPIGPNEDYN 121 Query: 123 ILIRSVGKKPSA----------------------IHLSREHFEIGEALGLMDFDRATKLS 160 IR GK E+ L +D +A +L+ Sbjct: 122 KPIRFWGKPKVPRSKLDSFMEQTRGFNVEYELIDWEPLGHADELEVMLKQVDTVKAGQLA 181 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G+RF L + LE+AL F +D S G+ V P ++R + G + F D ++ Sbjct: 182 GSRFFYLFKDIVWLEQALILFALD-KISRKGFIPVIPPYMMRRDYYLGVVDLNTFEDSIY 240 Query: 221 CTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI TSE L +++ + LP + L+P FR EAG+ G+DT+G+ R H Sbjct: 241 KVEGEDLYLIATSEHPLVAMHAGDTFTEDELPRLYVGLSPCFRKEAGTHGKDTKGIFRVH 300 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + ++ E+S HER++ AEEI + L++ YR+V++ +GDLG SA K YDLE Sbjct: 301 QFTKVEQIVFSKPEESKYWHERLIENAEEIYRELEIPYRIVNIASGDLGASAAKKYDLEG 360 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W Q YRE+ SCS C ++QS R+ R + +F HTLN + +A R + AI+EN Sbjct: 361 WFPAQGKYRELVSCSNCVDWQSYRL--RIKLDRKGRREFVHTLNSTALATTRTISAIVEN 418 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHIL 429 + DGSV IP LR Y+ KE I+ Sbjct: 419 HQREDGSVRIPKALRKYLEIFEQAPKEEIV 448 >gi|126642757|ref|YP_001085741.1| seryl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] gi|126388641|gb|ABO13139.1| seryl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] Length = 278 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 152/278 (54%), Positives = 195/278 (70%), Gaps = 3/278 (1%) Query: 148 LGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 +G ++F+ ATKL+G+RFSVL G LA L+RAL QFM+D HT ++GYTE P LV +++ Sbjct: 1 MGGLEFETATKLTGSRFSVLKGPLARLQRALTQFMLDTHTLKNGYTEAYVPYLVNADSLR 60 Query: 208 GTGQIPKFADDMFCTT--DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 GTGQ+PKF +D+F +LIPT+EV +TN EII++ LPL++ P FRSEA Sbjct: 61 GTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTNFVRDEIIDADRLPLKYAAHTPCFRSEA 120 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GS GRDTRG++RQHQF K E+V I + E S E + + AE IL+ L L YR + LC G Sbjct: 121 GSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQALEELTAHAEGILQALGLPYRKILLCGG 180 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS 385 D+GF A KTYDLEVW+ QN YREISSCS G+FQ+RRM +RYR + K + HTLNGS Sbjct: 181 DMGFGATKTYDLEVWVPSQNTYREISSCSNMGDFQARRMKARYR-MDQKKTELVHTLNGS 239 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 G+AVGR L+A++ENY DGS+ IP VLRPYM I Sbjct: 240 GLAVGRTLLAVMENYQREDGSIEIPEVLRPYMGGATFI 277 >gi|28572881|ref|NP_789661.1| seryl-tRNA synthetase [Tropheryma whipplei TW08/27] gi|46577235|sp|Q83HA1|SYS_TROW8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|28411014|emb|CAD67399.1| seryl-tRNA synthetase [Tropheryma whipplei TW08/27] Length = 417 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 147/430 (34%), Positives = 231/430 (53%), Gaps = 18/430 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRIL---IKKIEDIRARRNSNS 55 M+D + + P+ + ++ KKR + +++ R L I E +RA +N S Sbjct: 1 MIDPEILVNTPDIVRLSQKKRGESQSIVEDALIA----RRNLRIAINNFETLRAEQNVLS 56 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +I + S L + L E++ +E+ + S KKL+ IPN+ E P Sbjct: 57 KKIAGS----EDSDRPELMRVANLLAERVKNAREEQEKANSEWKKLLFEIPNIVSSEAPY 112 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G + +++VG P +H ++GE L +D R K+SG RF L G A LE Sbjct: 113 GVEDKCAV-MKTVGDIPEFDFEPADHLQLGEQLDAIDVSRGVKVSGTRFYFLKGWGARLE 171 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVS 235 A+ +DL G T + P LV+ E M GTG + + +++ G +L TSEV+ Sbjct: 172 LAVMNLALDLALKS-GLTLLITPTLVKPEIMLGTGFLGRHEGEVYRLPSGYYLTGTSEVA 230 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 + +S EI++ S P+R+ + +R EAGS GRDTRG++R HQF K E+ S + S Sbjct: 231 IAGYHSDEILDISSGPIRYAGWSSCYRREAGSHGRDTRGIMRVHQFSKLEMFSYVHPQQS 290 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 E E ++S E++L L++ YRV + +LG SA + YDLE W+ QN +RE++S S Sbjct: 291 TRELEHIVSMQEKMLNLLEIPYRVSDIAAEELGTSASRKYDLEAWIPSQNTWREVTSASD 350 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C FQ+RR+N RYRD + + + TLNG+ +A R L+AILEN+ ++GS+ +P LRP Sbjct: 351 CTTFQARRLNVRYRDESGR-TGYVATLNGT-LATTRFLVAILENHQTSNGSIRVPEALRP 408 Query: 416 YMNNLAVIKK 425 + VI++ Sbjct: 409 LL-GQDVIER 417 >gi|301108605|ref|XP_002903384.1| seryl-tRNA synthetase [Phytophthora infestans T30-4] gi|262097756|gb|EEY55808.1| seryl-tRNA synthetase [Phytophthora infestans T30-4] Length = 491 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 134/435 (30%), Positives = 224/435 (51%), Gaps = 13/435 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD + + +N + KKR + + + L ++ L + +RA RN+++ Q+GQA Sbjct: 57 LDYKKLVENVDAAIENGKKRCSDGNPQLVADLYQRQAKLRHSVNLLRAERNTHAKQLGQA 116 Query: 62 ----IAEGNLSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +G + + L+ LK ++ +E E +V + L+ IPN +VP+ Sbjct: 117 AAAKKKQGQEAEQVFETLRLRGQELKREIADVEAELGQVSAELELEALKIPNDTHPDVPV 176 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 G ++++ G+KP ++H+++ AL L+D A K++G++F+ L A +E Sbjct: 177 GGEEESRVVMKY-GEKPVFNFKPKDHYDLATALELLDTQTAAKVAGSKFTYLCNEGAMME 235 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSE 233 AL + + G+ + P + + + G G P+ L TSE Sbjct: 236 IALVHWTLS-KLRARGFKVMFPPDVAHYKLVEGCGFQPRGEATQIYSIANSDLCLTATSE 294 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++L S+EI+ + +LPL++ + FR+E G GR TRG+ R HQF K E+ + E Sbjct: 295 ITLAAAKSNEILSTPTLPLKYAGFSHCFRTEIGHGGRLTRGIYRIHQFSKVEMFAFCANE 354 Query: 294 -DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 + + M+ + L LHY ++ + TGDLG A + YDL W+ G+ Y E+SS Sbjct: 355 TQAQEFFDEMVEIQTSMYAELGLHYELMDMATGDLGAPAYRKYDLLAWMPGREEYGEVSS 414 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSL--KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 S C ++Q+RR+N R++DP ++ F HTLNG+ AV R LI++ E Y DGS+ IP Sbjct: 415 MSMCTDYQARRLNIRHKDPKAEETGTSFVHTLNGTACAVPRLLISLWETYQQEDGSIVIP 474 Query: 411 TVLRPYMNNLAVIKK 425 VLRPYM VI++ Sbjct: 475 EVLRPYMGGQEVIRR 489 >gi|254822673|ref|ZP_05227674.1| seryl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950] Length = 419 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 151/427 (35%), Positives = 236/427 (55%), Gaps = 12/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + R +P + +LS D R I + +RA + S S +G Sbjct: 1 MIDLKLLREDPDAVRRSQLSRGEDPTLVDTLLSADAARRAAISSADALRADQKSASKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + + L L EQ+ E + E ++ I NV ++ VP G Sbjct: 61 AASPDERPA----LLARAKELAEQVKAAEAAQAEAEAAFTAAHMAISNVVIDGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L +P A+ ++H E+GE+LGL+D R K+SG+RF LTG A L+ L Sbjct: 117 DFAVLDT--VGEPPALDDPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGQGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 Q L +G+T + P+LVR E M GTG + A++++ D +L+ TSEV L Sbjct: 175 QLAAQLAV-SNGFTLIIPPVLVRPEVMSGTGFLGAHAEEVYHLDADDLYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +++EI++ PLR+ + FR EAGS G+DTRG++R HQF K E D+ E Sbjct: 234 YHANEILDLSGGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L E+L R+++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HQRLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQGTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+++RYRD N K + TLNG+ + R L+AILEN+ DGSV +P L P++ Sbjct: 354 FQARRLSTRYRDENGK-PQTAATLNGT-LGTTRWLVAILENHQRPDGSVRVPEALVPFV- 410 Query: 419 NLAVIKK 425 V++ Sbjct: 411 GAEVLEP 417 >gi|48478304|ref|YP_024010.1| seryl-tRNA synthetase [Picrophilus torridus DSM 9790] gi|67461767|sp|Q6KZN5|SYS_PICTO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|48430952|gb|AAT43817.1| seryl-tRNA synthetase [Picrophilus torridus DSM 9790] Length = 444 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 137/444 (30%), Positives = 233/444 (52%), Gaps = 27/444 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+DI+ +R N E + + R + + + LD + + +K++ +I+ +NS + +I Sbjct: 1 MIDIKLLRLNSEIFYKSCRDRGFDTRILDEFFELDNEWKENLKQLNNIKHDKNSITMEIS 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + I G+ ++ LK + +L + LE ++E+ +++ IPN+ ++VP Sbjct: 61 RRIKSGD--DINDLKLKVESLNIDIQRLEGRQNEIDVKRNEILRLIPNLLADDVPRCFGD 118 Query: 120 NENILIRSVGKKP-------------------SAIHLSREHFEIGEALGLMDFDRATKLS 160 N L+R G+ + + H ++ L L D +RA K++ Sbjct: 119 ENNRLVRYYGRARVFSDDVKYFIENSGSGDYEEIDYRPKSHVDLISELNLADIERAGKIA 178 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 GARF L L LE AL + +D S+ GYT + P ++ ++M G I F D ++ Sbjct: 179 GARFYFLKNRLFKLELALINYAVDF-LSQRGYTVLEPPFMINYKSMSGATDIETFKDTLY 237 Query: 221 CTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 D +LI T+E + ++ EI+ LP+R + ++P FR EAG+ G+DT+G+ R H Sbjct: 238 KIEGDDLYLIATAEHPIASMLQDEILMEDELPIRVSGVSPCFRREAGAHGKDTKGIFRVH 297 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + EDS+ + ++ +E+I K L + YRVV++C+G+LG A K YD+E Sbjct: 298 QFNKIEQFVFCKPEDSWDFFDELVRNSEDIYKSLKIPYRVVNVCSGELGNLAAKKYDIEA 357 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W Q +REI S S ++Q+R +N +YR + +F HTLN + +A R L+AI+EN Sbjct: 358 WFPAQGKFREIVSASNDTDYQARSLNIKYRSRDGN--RFVHTLNSTAIATERILVAIMEN 415 Query: 400 YLNADGSV-TIPTVLRPYMNNLAV 422 + + +G V IP VL PY + Sbjct: 416 FQDRNGKVIKIPEVLIPYTGFSEI 439 >gi|296242418|ref|YP_003649905.1| seryl-tRNA synthetase [Thermosphaera aggregans DSM 11486] gi|296095002|gb|ADG90953.1| seryl-tRNA synthetase [Thermosphaera aggregans DSM 11486] Length = 460 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 141/449 (31%), Positives = 229/449 (51%), Gaps = 31/449 (6%) Query: 6 WIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 +R+NPE L +KKR ++ + LD++ R L+ +++++R + N S ++ +A Sbjct: 8 LLRENPELLKAHVKKRFMDTSMVDEAFRLDQEWRRLLTEVQELRHKHNVISREVSKAP-- 65 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 L + L + L QL + E + E+ + + + +PN E VP+G + N+ Sbjct: 66 --PELKEELLRQAKQLLSQLEMFEAKLKELEAQREDALRRLPNTVHESVPVGPDDSYNVP 123 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLM------------------------DFDRATKLS 160 IR GK + + E G D +A +++ Sbjct: 124 IRFWGKPKVWKEHVEQFKQQTEKYGFKVDYIEIDWKPIGHADMLENVLKLGDTLKAGEVA 183 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G+RF L + L+ AL + ID T GYT V P ++R E M G + F D ++ Sbjct: 184 GSRFYYLFNDIVFLDLALLMYAIDYLT-SKGYTLVLPPYMLRHEVMSGVIDLATFKDAIY 242 Query: 221 CTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI T+E SL L+ +E +E + LPL++ ++P FR EAG+ RD +G+ R H Sbjct: 243 KIEGEDLYLIATAEHSLAALHYNEDLEEEVLPLKYAGISPCFRKEAGAGSRDLKGIFRVH 302 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + E+S+ E ++ AEE+ K L+L YR+V++ +GDLG A K YDLE Sbjct: 303 QFHKIEQYVYAKPEESWDLMEELIGNAEELFKGLELPYRIVNIASGDLGAPAAKKYDLET 362 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q L+RE+ SCS ++QS R+ +R ++ HTLN + +A R + AILEN Sbjct: 363 WMPAQGLFREMVSCSNTTDWQSYRLRTRLIRRKGMVKEYVHTLNSTAIASTRTITAILEN 422 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 + DG+V IP VLR Y+ K+++ Sbjct: 423 HQQEDGTVYIPKVLRKYLEVFKAAPKDYL 451 >gi|125555413|gb|EAZ01019.1| hypothetical protein OsI_23053 [Oryza sativa Indica Group] Length = 409 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 131/401 (32%), Positives = 209/401 (52%), Gaps = 21/401 (5%) Query: 42 KKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 +++E +RA RN+ + + + S+ AL E LKE L LE++ ++ L+ Sbjct: 12 QEVERLRAERNAVA---NKMKGKLEPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLE 68 Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG 161 IPN + P+G + ++ + VG + + R+H ++G+ L L DFD A ++SG Sbjct: 69 AQSIPNTTHPDAPVGGEESS-VVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAEVSG 127 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 ++F L LE AL + I S+ G+T + P +VR + G P+ + Sbjct: 128 SKFYYLKNEAVLLEMALVNWAITE-VSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQVY 186 Query: 222 --TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + LI T+E+ + ++ I+ LP ++ + FR+EAG+AG TRG+ R H Sbjct: 187 SIDNSDQCLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSHCFRTEAGAAGAATRGLYRVH 246 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E+ R E+S HE +++ EE+ L LH++ + + TGDLG A + +D+E Sbjct: 247 QFSKVEMFVFCRPEESDKCHEELITIEEELYASLGLHFKTLDMATGDLGAPAYRKFDIEA 306 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRD----------PNSK----SLKFTHTLNGS 385 W+ G + Y EISS S C ++QSRR+ R+R K +F HTLN + Sbjct: 307 WMPGLDRYGEISSASNCTDYQSRRLGIRFRPSPADPPPANAKKGKGSSGPTQFVHTLNAT 366 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 VAV R +I ILEN+ DG+V IP LRP+M L V+ + Sbjct: 367 AVAVPRLIICILENFQQEDGTVVIPEPLRPFMGGLEVLSPK 407 >gi|330723447|gb|AEC45817.1| seryl-tRNA synthetase [Mycoplasma hyorhinis MCLD] Length = 422 Score = 324 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 167/428 (39%), Positives = 257/428 (60%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+ +++I N E + L R+ + + + I+ K L+ K+ D++A+RN S QIG Sbjct: 1 MITLKFILANVELVKTKLSHRNFDNKIIDEIVDFGSKKNELLLKLNDLKAKRNEFSDQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + +LKNE + EQ+ +E E +++ + +K ++ IPN+ L++VPIG Sbjct: 61 KLAREKKPT--QSLKNEVIKINEQISGIESEFNQIETQVKNMLLRIPNLALDDVPIGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N NI+ G+ H++I L ++DF RA KLSG RF + A L RAL Sbjct: 119 NANIVHSYWGEIEQKSFKILPHYDIATELDIIDFKRAVKLSGTRFVIYKNEGARLVRALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FMID H E+GY E+ LV ++A+YGT Q+PKFA+D++ D WLI T+E+ +TN Sbjct: 179 NFMIDTHL-ENGYKEILPNTLVLEQALYGTAQLPKFAEDLYKINDSNLWLISTAEIPITN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EII + P++F + S+RSEAGS GRDT+G++R H+F K ELV IT ++++ +E Sbjct: 238 YHAQEIINLEK-PIKFVGYSKSYRSEAGSGGRDTKGIIRMHEFHKVELVKITSQKEALSE 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+ + A ILK L + +R V L +GD+GF++ KT DLE W+ +N YRE+SS S CG+ Sbjct: 297 FEKTVDDAARILKLLKIPHRRVILSSGDMGFASKKTIDLEAWMPSENRYREVSSISICGD 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ++RM RY+ + +T+NGSG+A+ R + ILE Y G + IP VL PY Sbjct: 357 FQAQRMKLRYK--EDGKTLYANTINGSGLAIDRIIAIILEQYQTESGYIEIPEVLIPYFG 414 Query: 419 NLAVIKKE 426 + I + Sbjct: 415 KIKQITNK 422 >gi|304372952|ref|YP_003856161.1| Seryl-trna synthetase protein [Mycoplasma hyorhinis HUB-1] gi|304309143|gb|ADM21623.1| Seryl-trna synthetase protein [Mycoplasma hyorhinis HUB-1] Length = 422 Score = 324 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 167/428 (39%), Positives = 256/428 (59%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+ +++I N E + L R+ + + + I+ K L+ K+ D++A+RN S QIG Sbjct: 1 MITLKFILANVELVKTKLSHRNFDNKIIDEIVDFGSKKNELLLKLNDLKAKRNEFSDQIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E + +LKNE + EQ+ +E E +++ + +K ++ IPN+ L++VPIG Sbjct: 61 KLAREKKPT--QSLKNEVIKINEQISGIESEFNQIETQVKNMLLRIPNLALDDVPIGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N NI+ G+ H+ I L ++DF RA KLSG RF + A L RAL Sbjct: 119 NANIVHSYWGEIEQKSFKILPHYHIATELDIIDFKRAVKLSGTRFVIYKNEGARLVRALM 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FMID H E+GY E+ LV ++A+YGT Q+PKFA+D++ D WLI T+E+ +TN Sbjct: 179 NFMIDTHI-ENGYKEILPNTLVLEQALYGTAQLPKFAEDLYKINDSNLWLISTAEIPITN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EII + P++F + S+RSEAGS GRDT+G++R H+F K ELV IT ++++ +E Sbjct: 238 YHAQEIINLEK-PIKFVGYSKSYRSEAGSGGRDTKGIIRMHEFHKVELVKITSQKEALSE 296 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+ + A ILK L + +R V L +GD+GF++ KT DLE W+ +N YRE+SS S CG+ Sbjct: 297 FEKTVDDAARILKLLKIPHRRVILSSGDMGFASKKTIDLEAWMPSENRYREVSSISICGD 356 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ++RM RY+ + +T+NGSG+A+ R + ILE Y G + IP VL PY Sbjct: 357 FQAQRMKLRYK--EDGKTLYANTINGSGLAIDRIIAIILEQYQTESGYIEIPEVLIPYFG 414 Query: 419 NLAVIKKE 426 + I + Sbjct: 415 KIKQITNK 422 >gi|145591868|ref|YP_001153870.1| seryl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] gi|145283636|gb|ABP51218.1| seryl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 463 Score = 324 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 133/444 (29%), Positives = 217/444 (48%), Gaps = 24/444 (5%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R NP+ + L R ++P E L LDE+ R L K+++++R N S + +A Sbjct: 20 LEALRNNPDAVRKVLVARRMDPSLVEKFLGLDERWRQLKKEVDELRHEYNKLSREGARAP 79 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E LV+ K L +L +EKE +V + ++++ PN+ E VP ++ Sbjct: 80 PERRRELVERAK----ELAARLEKVEKELEDVEKAREEVLWSFPNLIHESVPTCPEGVDS 135 Query: 123 ILIRSVGKKPSAIH----------------LSREHFEIGEALGLMDFDRATKLSGARFSV 166 + +R G A + L + D +A +++G+RF Sbjct: 136 VPVRYWGVVKVANNAAELPRGVDYVVVERSPVGHADMAEVVLKMADTLKAGEVAGSRFYY 195 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DG 225 L L L+ AL + +D T + G+ V P +++ + + F D ++ + Sbjct: 196 LFDDLVWLDFALAMYAMDYLT-QRGFRPVIPPYMLKFDVIRRVLDFDTFKDAIYKIDGED 254 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LI T+E + + + LP + +P FR EAG+ RD +G+ R H F K E Sbjct: 255 LYLIATAEHGIAAYLYKRELVEEELPQLYVGWSPCFRKEAGAGNRDLKGIFRVHIFHKVE 314 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + E+S+ HE + EE+++ L L YRVV++C DLG A K YD+EVW Q Sbjct: 315 QFVFSLPEESWKWHEEITKNTEELIRGLGLPYRVVNICAHDLGAPAAKKYDIEVWYPAQG 374 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +YRE++SCS ++QS R+ R +F HTLN +G+A R + AILEN+ DG Sbjct: 375 MYRELASCSNVTDWQSYRLGIRV-TRKGMKREFVHTLNCTGLATTRTITAILENFQREDG 433 Query: 406 SVTIPTVLRPYMNNLAVIKKEHIL 429 +V IP LRPY+ + K+ IL Sbjct: 434 AVEIPKALRPYLEPIKAAPKDSIL 457 >gi|223996551|ref|XP_002287949.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220977065|gb|EED95392.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 398 Score = 324 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 163/398 (40%), Positives = 233/398 (58%), Gaps = 22/398 (5%) Query: 51 RNSNSAQIGQAIAEGNLSLVDA---LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 RN S ++G+ + + +K + S E+ +E E E+ S++ +L++ +PN Sbjct: 2 RNECSGKVGKMMGVSKGEETEEIIEMKAKASEAGEEASKVEGELSEIESTMNRLLASLPN 61 Query: 108 VPLEEVPIGTSANENILIRSVGKKPS--------AIHLSREHFEIGEALGLMDFDRATKL 159 + + VP G + +N L+ G S H ++ LG + A + Sbjct: 62 LLDDVVPDGENDGDNELVSQWGDVESLPKELGWTDDFEPLWHDDVATNLGGWHSEAAVGM 121 Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 SGARF LTG +A LERA+ + +D SE GYTEVS PL+V A+ GT Q+PKF +D+ Sbjct: 122 SGARFVSLTGSVARLERAISSYFLDR-ASEKGYTEVSPPLVVSRSALEGTSQLPKFEEDL 180 Query: 220 FCTTDGRWLI--------PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRD 271 F PT+EV LTN+++++I+E LP+ + + P FR+EAGS GRD Sbjct: 181 FKIVPESHTCNGQDAFLIPTAEVPLTNMHANQILEESDLPISYCAMTPCFRAEAGSYGRD 240 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 TRG++R HQF+K ELV IT E S EHE++ AEE L+ L + +R + LC+GD+GFSA Sbjct: 241 TRGLIRTHQFYKVELVKITTAETSANEHEKLTRHAEECLEELKIPFRKMRLCSGDVGFSA 300 Query: 332 CKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK--FTHTLNGSGVAV 389 YDLE WL YREISSCS G+FQ+RRM RYR + K HT+NGSG+AV Sbjct: 301 QHCYDLEAWLPSTGEYREISSCSNTGDFQARRMGLRYRPAATAKPKPVLCHTINGSGLAV 360 Query: 390 GRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEH 427 GR L+A+LENY +G V +P VLRPYM + ++KK++ Sbjct: 361 GRTLVAVLENYQTPEGDVVVPEVLRPYMGGVEILKKKN 398 >gi|110589390|gb|ABG77204.1| seryl-tRNA synthetase class IIa [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 312 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 161/313 (51%), Positives = 217/313 (69%), Gaps = 3/313 (0%) Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP G +N R G+ P +++H ++G GL+D + A KL+G+RF+V++G LA Sbjct: 1 VPDGKDEEDNREERRWGEPPQFDFEAKDHVDLGIENGLLDAEAAAKLTGSRFTVMSGPLA 60 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIP 230 + RAL Q M+D H +HGYTE P LV +++ GTGQ+PKF +++F +LIP Sbjct: 61 RMHRALIQLMLDTHI-QHGYTEAYVPYLVNSDSLRGTGQLPKFEEELFKLQGEHEYYLIP 119 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV LTNL II++ +P R+ P FRSEAGS G+DTRGM+RQHQF K ELV I Sbjct: 120 TAEVPLTNLVRDVIIDADEMPRRYVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQIV 179 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 R EDSF E++ S AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVWL GQ YREI Sbjct: 180 RAEDSFDALEQLTSHAEAILQKLELPYRVVTLCTGDIGFSATKTYDLEVWLPGQGKYREI 239 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS +FQ+RR+ +R+R+P + + HT+NGSG+AVGR L+A++ENY +A+G V +P Sbjct: 240 SSCSNFVDFQARRLQARWRNPETGKPELVHTVNGSGLAVGRTLVAVMENYQDAEGRVRVP 299 Query: 411 TVLRPYMNNLAVI 423 LRPYM + VI Sbjct: 300 EALRPYMGGIEVI 312 >gi|145494412|ref|XP_001433200.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124400317|emb|CAK65803.1| unnamed protein product [Paramecium tetraurelia] Length = 451 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 132/439 (30%), Positives = 214/439 (48%), Gaps = 19/439 (4%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI +R+ NP + +KR +P + +++LD++ R ++ + + Sbjct: 3 LDINLLREDKGGNPNLVKEWCQKRFQDPAIVDKVVALDQEWRKARFNLDQLNKEYGIANK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I + + + ++ +K E E + L K ++ I N+ E VP+ Sbjct: 63 KIAEKKKANKQDPCVEEVEQAKAIDLKIKEAQKVEQEQENILTKTLNKIGNLVHESVPVS 122 Query: 117 TSANENILIRSVGKKPSA----IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 EN + + G+ P+ H EI + +D R +K++G R L G Sbjct: 123 KDEAENRIEVTWGQIPNIQVNSTPGRCHHHEILFMIDGVDLKRGSKIAGHRAYFLKGPGL 182 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L +AL + I ++ GYT V P ++ M T Q+ F D ++ + + Sbjct: 183 LLNQALVSYGIQF-LNQRGYTPVQTPYFMKKTCMAETAQLSDFDDQLYKVTGNQDDEDLY 241 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE ++ +Y E +E+K LP+++ + FR EAG+ G+D G+ R HQF K E Sbjct: 242 LIATSEQPISAMYRKEWLEAKDLPIKYGGSSTCFRKEAGAHGKDVWGIFRVHQFEKIEQF 301 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 I E+S+ HE M++ ++ +K L+L YRVV++ +G L +A K YDLE W G Y Sbjct: 302 VICPPEESWKFHEEMITAGQDFVKSLELPYRVVNIVSGALNDAAAKKYDLEAWFPGYKDY 361 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 RE+ SCS C ++QSR + RY + + K K+ H LN + A R L ILENY G Sbjct: 362 RELQSCSNCLDYQSRALEIRYGAKKADEKEKKYVHMLNATLCATERTLCCILENYQTETG 421 Query: 406 SVTIPTVLRPYMNNLAVIK 424 V +P VL+PY+ I Sbjct: 422 -VKVPAVLQPYV-GKDFIP 438 >gi|167534977|ref|XP_001749163.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772316|gb|EDQ85969.1| predicted protein [Monosiga brevicollis MX1] Length = 473 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 133/426 (31%), Positives = 204/426 (47%), Gaps = 15/426 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD + +++P + ++R++ + +L+ + L + +RARRN +A I A Sbjct: 35 LDFRTWKEDPAAVLQNARRRNVRLDLDLVLARHDAFTDLEYQSRQLRARRNEITADIKSA 94 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 G+ ++ AL E +L+ +L +E E L + +PN VP Sbjct: 95 HQAGDDAVKQALAEEAKSLRSRLADVEAERDATYLELMQEALHVPNHTHPAVPDEEPTVL 154 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + VG KP R+H +GE L DF+ + +G F L A LE AL Q Sbjct: 155 QV----VGSKPVFDFEPRDHIALGEMHELFDFEAGARTTGTSFYYLKNAAAALEMALIQL 210 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPTSE 233 ++ GY VS P +VR+ + G G P+ L T+E Sbjct: 211 ALNRM-MLAGYMPVSPPDVVRESLVAGCGFQPRDEASQVYELASKHASGAGTLCLAGTAE 269 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 + L L ++ LPL +FR EAGS G TRG+ R HQF K EL SI + Sbjct: 270 IPLAGLNMQRTFAAEELPLNMVAFGRAFRCEAGSHGTATRGLYRVHQFSKVELFSIMPND 329 Query: 294 D--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 + S HE++L+ ++ L LH+ V+ + DLG A + +D+E W+ G+ Y EIS Sbjct: 330 EALSNAMHEKILADQVQLFTDLGLHFEVLDMPAHDLGAPAYRKFDIEAWMPGRASYGEIS 389 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S S C ++QSRR+ R + + S F HTLNG+ A+ R LIA+LE + ADG + +P Sbjct: 390 STSNCLDYQSRRLEIRCKTADGTSSGFAHTLNGTACAIPRLLIALLETHQQADGRIPMPA 449 Query: 412 VLRPYM 417 VL P++ Sbjct: 450 VLHPFL 455 >gi|13541818|ref|NP_111506.1| seryl-tRNA synthetase [Thermoplasma volcanium GSS1] gi|30173200|sp|Q979Z3|SYS_THEVO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|14325255|dbj|BAB60159.1| tRNA synthetase Ser [Thermoplasma volcanium GSS1] Length = 441 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 148/448 (33%), Positives = 236/448 (52%), Gaps = 29/448 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R N E + + R ++ + LDE+ R + +++ RA +N + I Sbjct: 1 MIDVKLLRSNRELFEKNCEYRGVDKAIIDQFFKLDEEWRSVNRELNGQRAEKNRMTRAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +++ G + V K+ + E++ LEK+ E+ +++ IPN+ E VPI Sbjct: 61 ESLKRGKI--VSNEKDRVELINEKIVSLEKKIREIEEERDRVLWTIPNLIHESVPICFGD 118 Query: 120 NENILIRSVGKKPSA--------------------IHLSREHFEIGEALGLMDFDRATKL 159 N ++R VG + H ++G+ LG++D + A K+ Sbjct: 119 ENNKIVRYVGHAKVYRDDEEEFLKGSGGNGDYEVIDERPKSHVDLGQELGIIDLESAAKI 178 Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 SGARF + L LE AL + +D S+ G+T V P ++ E+M G + F D + Sbjct: 179 SGARFYFIKNRLLKLEMALENYAVDF-LSQRGFTVVEPPYMLNLESMRGATDLETFKDTL 237 Query: 220 FCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + + +LI TSE S+ ++ S+E +E K LP+R ++ FR EAG+ G+DT+G+ R Sbjct: 238 YKIEDEDLYLIATSEHSIASMLSNEFLEEKELPIRVAGVSACFRREAGAHGKDTKGIFRV 297 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 HQF K E + EDS+ E +LS AEEI + L + YRVV++C+G+LG A K YD+E Sbjct: 298 HQFNKIEQFIFCKPEDSWDYLEEILSNAEEIYRSLGIPYRVVNVCSGELGRLAAKKYDIE 357 Query: 339 VWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 W Q +REI S S ++Q+R +N +YR +F HTLN + +A R L+AI+E Sbjct: 358 AWFPAQGKFREIVSASNDTDYQARSLNIKYRKSGGN--EFVHTLNSTAIATTRILVAIME 415 Query: 399 NYLNADGSVTIPTVLRPYMNNLAVIKKE 426 N+ DG + IP VL PY I KE Sbjct: 416 NFQ-EDGRIRIPDVLVPYT-GFQYIDKE 441 >gi|212550895|ref|YP_002309212.1| seryl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549133|dbj|BAG83801.1| seryl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 424 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 139/428 (32%), Positives = 236/428 (55%), Gaps = 8/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML ++ I N + + I L K+H + + ++ +DEK + + ++ + S + Sbjct: 1 MLTLKTITDNTQAVIIKLAKKHFDAKDIITEVVKVDEKRKSIQILLDRNFYKLKKMSKSV 60 Query: 59 GQAI-AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 GQ I G V ++ + LKE LE E + + + +L+ IPN+P ++VP+G Sbjct: 61 GQLIIKRGQEEEVKLIRKQVVHLKEDNKKLESEMKKAENKITELLYQIPNLPSDQVPVGK 120 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +N++ + G+ P + H+E+ + L+DF+ K++G+ F V A L+RA Sbjct: 121 YSKDNVIEKREGQIPFLSSNALPHWELAKKYDLIDFELGVKITGSGFPVYKQKGAQLQRA 180 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L F +D + + Y E+ P ++ + YGTGQ+P M+ D +LIPT+EV L Sbjct: 181 LINFFLD-NARKADYIEIQPPYMINARSAYGTGQLPDKEGQMYHYEMDELYLIPTAEVPL 239 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+Y + I++ K LP++ T + FR EAGS G+D RG+ R HQF K E+V I + S+ Sbjct: 240 TNIYRNIILDEKDLPIKNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPDHSY 299 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + M+S + ++ +L+L +R++ LC GD+ F++ T+D EV+ A Q + E+SS S Sbjct: 300 ESLQEMVSYVQTLIGKLELPWRLLRLCGGDMSFTSALTFDFEVYSAAQKRWLEVSSVSNF 359 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 ++Q+ R+ RYR + K + HTLNGS +A+ R + A++EN + G + IP L PY Sbjct: 360 ESYQANRLKCRYRGKD-KKIHLCHTLNGSALALPRIVAALIENNQTSVG-IKIPKALTPY 417 Query: 417 MNNLAVIK 424 I Sbjct: 418 TQ-FDFIP 424 >gi|70998718|ref|XP_754081.1| seryl-tRNA synthetase [Aspergillus fumigatus Af293] gi|66851717|gb|EAL92043.1| seryl-tRNA synthetase [Aspergillus fumigatus Af293] gi|159126185|gb|EDP51301.1| seryl-tRNA synthetase [Aspergillus fumigatus A1163] Length = 474 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 125/440 (28%), Positives = 211/440 (47%), Gaps = 20/440 (4%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ NP + + +KR + +++L E+ R ++ I + N+ Sbjct: 1 MLDLADFVSDRGGNPNKIKESQRKRFAPENVVDEVIALYEEARRARYEVMQIGSELNALQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ + V L + + L+++ E+ E S + I I N E VP+ Sbjct: 61 KEIGKRKKNKEDAGV--LMEQKAALEKRKKEAEEHASEQESRRDRKIRTIGNYVHESVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + ++N+++R+ + + H E+ L D +R K+ G R LTG+ Sbjct: 119 SNNEDDNVVVRTWAPENVLVEKRNCLSHHEVLTRLDGYDSERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + E M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALINYGLEF-LWRKGYKPNQPPQFMLKELMAKTAQLEQFDEELYKVTESDDKSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E I+ K LP+++ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWIQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKVEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ E+S+ E M++ +EE + L L Y+VV++ +G L +A K YDLE W Q Y Sbjct: 298 VLTKPENSWQVFEEMMATSEEFYQSLGLPYQVVAIVSGALNNAASKKYDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R + RY + + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCCILENYQTDDG 417 Query: 406 SVTIPTVLRPYMNNL-AVIK 424 +P LR Y+ + Sbjct: 418 -FNVPEPLRKYIPGAPEFLP 436 >gi|167949909|ref|ZP_02536983.1| seryl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 312 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 160/313 (51%), Positives = 217/313 (69%), Gaps = 3/313 (0%) Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 +P G +N R G+ P +++H ++G GL+D + A KL+G+RF+V++G LA Sbjct: 1 MPDGKDEEDNREERRWGEPPQFDFEAKDHVDLGIENGLLDAEAAAKLTGSRFTVMSGPLA 60 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIP 230 + RAL Q M+D H +HGYTE P LV +++ GTGQ+PKF +++F +LIP Sbjct: 61 RMHRALIQLMLDTHI-QHGYTEAYVPYLVNSDSLRGTGQLPKFEEELFKLQGEHEYYLIP 119 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+EV LTNL II++ +P R+ P FRSEAGS G+DTRGM+RQHQF K ELV I Sbjct: 120 TAEVPLTNLVRDVIIDADEMPRRYVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQIV 179 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 R EDSF E++ S AE IL++L+L YRVV+LCTGD+GFSA KTYDLEVWL GQ YREI Sbjct: 180 RAEDSFDALEQLTSHAEAILQKLELPYRVVTLCTGDIGFSATKTYDLEVWLPGQGKYREI 239 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS +FQ+RR+ +R+R+P + + HT+NGSG+AVGR L+A++ENY +A+G V +P Sbjct: 240 SSCSNFVDFQARRLQARWRNPETGKPELVHTVNGSGLAVGRTLVAVMENYQDAEGRVRVP 299 Query: 411 TVLRPYMNNLAVI 423 LRPYM + VI Sbjct: 300 EALRPYMGGIEVI 312 >gi|70607320|ref|YP_256190.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] gi|76363444|sp|Q4J8I4|SYS_SULAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|68567968|gb|AAY80897.1| seryl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] Length = 458 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 152/449 (33%), Positives = 233/449 (51%), Gaps = 30/449 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ IR NPE L LK+R ++ + + LD+K R ++++E +R N S+QI +A Sbjct: 6 LELIRNNPEVLKENLKRRFIDTSTVDKAVELDKKWRQTLQEVERLRHEHNLISSQIPKAP 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E L N+ L + L EKE ++ + L+ +PN+ + VPIG + + Sbjct: 66 KEQKSE----LINKAKELLKTLEDKEKELQKIEEERENLLLSLPNLVHDSVPIGPDESYS 121 Query: 123 ILIRSVGKKPSAIHLSREHFE----------------------IGEALGLMDFDRATKLS 160 + IR GK E + + L L D +A +++ Sbjct: 122 VPIRFWGKFKVYKDDVNEFLKQTNGHKVDYEVINWKPVGHADMLENVLRLGDTKKAGEVA 181 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 +RF L + L+ AL + ID T GYT V P ++R E + + F D ++ Sbjct: 182 ASRFYYLFNDIVWLDLALLLYAIDTIT-SRGYTLVLPPYMLRGEVIKSVIDLDTFKDAIY 240 Query: 221 CTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI T+E S+ LY E I + LPL+ ++P+FR EAG+A +D +G+ R H Sbjct: 241 KIEGEDLYLIATAEHSIAALYYKEEIPKEELPLKLVGVSPAFRKEAGAANKDLKGIFRVH 300 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + EDS+ HE M+ AEEI + L L YRV+++ +GDLG A K YDLEV Sbjct: 301 QFHKVEQFIFSSPEDSWKYHEEMIENAEEIFRGLGLPYRVINIASGDLGAPAAKKYDLEV 360 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q +RE+ SCS C ++Q+ RM RY + N+K + HTLN + +A R + AILEN Sbjct: 361 WMPAQAKFREMVSCSNCLDWQAYRMRIRYVEKNNKK-GYLHTLNSTAIASTRAITAILEN 419 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 + DG V +P VLR Y+ + KE+I Sbjct: 420 FQKEDGVVEVPKVLRKYLETFSGAPKEYI 448 >gi|240172632|ref|ZP_04751291.1| seryl-tRNA synthetase [Mycobacterium kansasii ATCC 12478] Length = 420 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 150/428 (35%), Positives = 235/428 (54%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + R +P + +L+ D R I + +RA + + S +G Sbjct: 1 MIDLKLLREDPDAVRRSQLSRGEDPSLVDALLTADAARRRTIAAADALRAEQKAASKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A + + L L EQ+ E + E ++ IPNV L+ VP G Sbjct: 61 GASPDERPA----LLQRAKDLAEQVKTAEANQTETEAAFTAAHLAIPNVVLDGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L V +P + ++H E+GEALGL+D R K+SG+RF LTG A L+ L Sbjct: 117 DYAVLD--VVGEPVELADPKDHLELGEALGLIDMQRGAKVSGSRFYFLTGRGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q + L ++G+ + P+LVR E M GTG + A++++ D +L+ TSEV L Sbjct: 175 QLALRLAV-DNGFIPMIPPVLVRPEVMAGTGFLGAHAEEVYRLEADDLYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +S EI++ + PLR+ + FR EAGS G+DTRG++R HQF K E D+ E Sbjct: 234 YHSGEILDLAAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCTPGDAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L E+L +++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HQRLLGWQREMLALIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQGAYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR+ RYRD + K + TLNG+ + R L+AILEN+ DGSV +P L P++ Sbjct: 354 FQARRLAIRYRDADGK-PRIAATLNGT-LGTTRWLVAILENHQQPDGSVRVPAALVPFV- 410 Query: 419 NLAVIKKE 426 V++ Sbjct: 411 GTEVLEPR 418 >gi|320588821|gb|EFX01289.1| seryl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 493 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 111/440 (25%), Positives = 203/440 (46%), Gaps = 24/440 (5%) Query: 1 MLD-IQWIRQ---NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD + I + NPE + + ++R + + ++ L + +R + + A+ N Sbjct: 1 MLDVLDLIVERGGNPEAVRESQRRRFAPVEVVDQVIDLWQDHRRTLYAATQLNAKINEIQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QIG D L + ++++ + + K ++ I N+ + VP+ Sbjct: 61 KQIGAKKKA--KENADELLQQKIAIEKEKKEILDSAAAKEKIMNKALATIGNIIHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE-------HFEIGEALGLMDFDRATKLSGARFSVLT 168 + ++N +R+ + + +E H E+ + + + K+ G R L Sbjct: 119 SATEDDNPTLRTWVPADREVPIGQEDRSTLLSHHELLLRIDGYNPEAGVKVVGHRGYFLK 178 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW- 227 L +A+ F ++ T +HGYT + +P ++ E M T Q+ F + ++ Sbjct: 179 NWGVFLNQAIINFGLEFLTQQHGYTALQSPFMMSKEVMAQTAQLDDFDEQLYKACRLLVV 238 Query: 228 ------LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + SE ++ ++ + ++ +P+++ + FR EAGS G+D G R HQF Sbjct: 239 DGDSEKYLIASEQPISAYHAGQWLQPAEMPIKYAGFSTCFRREAGSHGKDAWGTFRVHQF 298 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E + E S+ + M++ +EE + L L YRV+++ +G +A K +DLE W Sbjct: 299 EKVEQFVLCDPEKSWEMFDAMIANSEEFCQALGLPYRVIAIVSGAFNQAASKKFDLEAWF 358 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 Q Y+E+ SCS C +FQSR ++ RY + K+ H LN + A R + AILEN Sbjct: 359 PYQAEYKELVSCSNCTDFQSRALDIRYGAKTQTDAKKKYVHCLNSTLTATSRTMCAILEN 418 Query: 400 YLNADGSVTIPTVLRPYMNN 419 + +G V IP LR Y+ Sbjct: 419 FQTPEG-VRIPEPLRKYLPG 437 >gi|327403941|ref|YP_004344779.1| seryl-tRNA synthetase [Fluviicola taffensis DSM 16823] gi|327319449|gb|AEA43941.1| seryl-tRNA synthetase [Fluviicola taffensis DSM 16823] Length = 423 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 147/426 (34%), Positives = 234/426 (54%), Gaps = 7/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML++ IR + + ALKKR+++ + I+ D++ R +E I + N + +I Sbjct: 1 MLEMTKIRAERDEIITALKKRNIDVTETIDAIIEKDQQWRAAKTSMESIASELNKIAKEI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ G + +A K +T+ LK+ L+ + + + + +L+ IPNVP V G + Sbjct: 61 GEFFKTGKTAEAEAAKAKTADLKQDEQQLKTQVDTLENDITQLLYQIPNVPNTLVVAGKN 120 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +N I VG+ + + H+E+ + L+DF+ K++GA F V G A L+RAL Sbjct: 121 EEDNETIEVVGEPAVLHNKAVPHWELTKKFDLIDFELGVKITGAGFPVYRGKGAKLQRAL 180 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 QF +D + GY E P +V + + YGTGQ+P M+ D ++IPTSEV LT Sbjct: 181 IQFFLDE-AEKAGYEEFIVPHVVNEASAYGTGQLPDKEGQMYYMPVDELYMIPTSEVPLT 239 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y ++ ++ ++ T+ P FR EAGS G RG+ R HQF K E+V I +++ Sbjct: 240 NVYRDVVLPDENFSIKMTSYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPKNTDR 299 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 M++ + +L++L LHYR++ LC GD GF++ TYD EV+ A Q + E+SSCS Sbjct: 300 ALTEMVNHVKGLLEKLGLHYRILRLCGGDTGFASAMTYDFEVFSAAQEKWLEVSSCSRFD 359 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+ R+ R++ + K HTLNGS +A+ R + +I+ENY DG + IP VL Y Sbjct: 360 TFQANRLKLRFKGSD-KKNHLAHTLNGSALALPRIMASIMENYQTLDG-IEIPEVLHKYT 417 Query: 418 NNLAVI 423 I Sbjct: 418 -GFTRI 422 >gi|325120697|emb|CBZ56252.1| putative seryl-tRNA synthetase [Neospora caninum Liverpool] Length = 480 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 138/465 (29%), Positives = 214/465 (46%), Gaps = 44/465 (9%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSA 56 +D+ +R +P + + +R + + + +D K R + ++E ++ N+ + Sbjct: 3 IDVNLLRAEKGGDPGLVRDSEVRRGRSGEVVDQAVEVDRKWRENLFQLEQLKKELNAVNK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +IGQ + L + + LK++LP +E + + L+ I N+ + VP+ Sbjct: 63 EIGQRKKKDAKDPCQDLLTQAAELKQRLPTIEAAATQAEEKRESLLHKIGNIVHKSVPVS 122 Query: 117 TSANENILIRSVGKKPSAIHL-----SREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 N ++R+ G +I + H +I LG +DF + + +G R L G Sbjct: 123 NDEANNQVVRTWGTFDRSIKIDGTPGRMHHHQILARLGGVDFKKGVEAAGHRGYFLKGAG 182 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------- 224 L AL Q+ + GYT V P +R E M ++ F + ++ Sbjct: 183 MLLNVALAQYGLAFLL-RKGYTPVQPPFFMRKEVMARAAELKDFEETLYRIPHAQAAAGA 241 Query: 225 ------------------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 +LI TSE L +L+ E +E K LP+R+ + FR EAG Sbjct: 242 PADKAGAEKKNEKDADRDDLFLIATSEQPLCSLHMGETLEEKELPIRYAGYSSCFRKEAG 301 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 S G+D G+ R HQF K E IT E+S+ HE M+ AEE + L+L YRVVS+ +G Sbjct: 302 SHGKDCWGIFRIHQFEKVEQFCITTPEESWKMHEDMIGAAEEFYQSLELPYRVVSIVSGA 361 Query: 327 LGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY-------RDPNSKSLKFT 379 L +A K YDLE W G YRE+ SCS C ++QSR ++ R + + Sbjct: 362 LNDAAAKKYDLEAWFPGYEDYRELVSCSNCTDYQSRALDIRLAHKASTAKGADKNEKGHV 421 Query: 380 HTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 H LNG+ VA RCL ILENY G V +P VL PYM + Sbjct: 422 HMLNGTLVATQRCLCCILENYQTPLG-VKVPRVLVPYMGGAEFLP 465 >gi|67903760|ref|XP_682136.1| hypothetical protein AN8867.2 [Aspergillus nidulans FGSC A4] gi|40740965|gb|EAA60155.1| hypothetical protein AN8867.2 [Aspergillus nidulans FGSC A4] gi|259482913|tpe|CBF77842.1| TPA: seryl-tRNA synthetase (AFU_orthologue; AFUA_5G05490) [Aspergillus nidulans FGSC A4] Length = 474 Score = 323 bits (827), Expect = 5e-86, Method: Composition-based stats. Identities = 127/440 (28%), Positives = 209/440 (47%), Gaps = 20/440 (4%) Query: 1 MLDIQWIRQN----PEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ + P + + ++R E + +++L E+ R ++ I ++ N Sbjct: 1 MLDLADFITDRGGDPNKIKESQRRRSAPEAAVDEVITLYEEARKARYEVSQINSKLNGLL 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + N +L E + L+ Q E + K I I N + VP+ Sbjct: 61 REIG--KKKKNKEDATSLLEEKAKLESQRKEAESVALQKEDLRDKKIRTIGNYVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + ++N +IR+ + H E+ L D +R K+ G R LTG+ Sbjct: 119 SNNEDDNSVIRTWFPEGFVAEKPNCLSHHEVLTRLDGYDPERGVKVVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ + GY P + E M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LWKRGYKPNQPPHFMLREMMAKTAQLEQFDEELYKVTESEDKSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E ++ K LP+R+ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDSEWLQDKDLPIRYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ EDS+ + M+S +EE K L L Y+VVS+ +G L +A K YDLE W Q Y Sbjct: 298 VLTKPEDSWKAFDEMISTSEEFYKSLGLPYQVVSIVSGALNNAAAKKYDLEAWFPFQQEY 357 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R + RY + + H LN + A R L +LENY DG Sbjct: 358 KELVSCSNCTDYQARALGIRYGPKKTTDAKKSYVHALNATLCATERTLCCVLENYQTEDG 417 Query: 406 SVTIPTVLRPYMNNL-AVIK 424 + +P LR Y+ + Sbjct: 418 FI-VPEPLRKYIPGAPEFLP 436 >gi|119498645|ref|XP_001266080.1| seryl-tRNA synthetase [Neosartorya fischeri NRRL 181] gi|119414244|gb|EAW24183.1| seryl-tRNA synthetase [Neosartorya fischeri NRRL 181] Length = 474 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 125/440 (28%), Positives = 211/440 (47%), Gaps = 20/440 (4%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ NP + + +KR + +++L E+ R ++ I + N+ Sbjct: 1 MLDLADFVSDRGGNPNKIKESQRKRFAPENVVDEVITLYEEARRARYEVMQIGSELNALQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ + V L + + L+++ E+ E S + I I N E VP+ Sbjct: 61 KEIGKRKKNKEDAGV--LMEQKAALEKRKKEAEEHASEQESRRDRKIRTIGNYVHESVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + ++N+++R+ + + H E+ L D +R K+ G R LTG+ Sbjct: 119 SNNEDDNVVVRTWAPENVVVEKRNCLSHHEVLTRLDGYDSERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + E M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALINYGLEF-LWRKGYKPNQPPQFMLKELMAKTAQLEQFDEELYKVTESDDKSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E I+ K LP+++ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWIQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKVEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ E+S+ E M++ +EE + L L Y+VV++ +G L +A K YDLE W Q Y Sbjct: 298 VLTKPENSWQVFEEMMATSEEFYQSLGLPYQVVAIVSGALNNAASKKYDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R + RY + + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCCILENYQTDDG 417 Query: 406 SVTIPTVLRPYMNNL-AVIK 424 +P LR Y+ + Sbjct: 418 -FNVPEALRKYIPGAPEFLP 436 >gi|294155972|ref|YP_003560356.1| serine--tRNA ligase [Mycoplasma crocodyli MP145] gi|291600158|gb|ADE19654.1| serine--tRNA ligase [Mycoplasma crocodyli MP145] Length = 422 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 183/426 (42%), Positives = 273/426 (64%), Gaps = 8/426 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+I++I +N + + A+K R + + ++ L ++ + + + A+ S + G Sbjct: 1 MLNIKFILENDKLVKKAMKNRSFDLTIIDRVIELGKQRGSAMTAAQQMSAQLGILSKEFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 I + + + +D LK E +K++ +L K+ E+ + + L++ IPN+PLE+VP+G Sbjct: 61 --INKNDKTAIDKLKKEIKKVKDEQAVLLKKADEINNEINNLLAYIPNLPLEDVPVGKDE 118 Query: 120 -NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++ I + H+E+G+ L L D +RA K+SG+RF + A L RAL Sbjct: 119 IMNQVIRNHDKLGRGLITGIKPHYEVGKNLDLFDLERAVKMSGSRFVLYKDKGAKLVRAL 178 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 FM+DLH S GY E P++V+D+ +YGTGQ+PKF +D+F +LIPT+EV LT Sbjct: 179 MNFMLDLH-SSKGYIECLPPVIVKDKMLYGTGQLPKFKEDLFTLEGGEMYLIPTAEVPLT 237 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N+Y+ EI++ S P+ FT FRSEAGS+GRDTRG++R HQF K ELV IT E+DS Sbjct: 238 NIYNDEIVDLTS-PILFTAFTECFRSEAGSSGRDTRGIIRNHQFKKVELVKITSEKDSIK 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E E+ML A+++L +L++ +R V LCTGDLGFS+ KT DLE+WL + +RE+SS S G Sbjct: 297 EFEKMLEDAKDVLVKLEIPFREVLLCTGDLGFSSRKTIDLELWLPSEMKFREVSSVSYMG 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQ+RR RYRD N++ ++ HT+NGSG+A+ R + AILENY N DGS+ +PTVL PYM Sbjct: 357 DFQARRGMIRYRDENNQ-TQYAHTMNGSGLAIDRIVAAILENYQNKDGSIAVPTVLVPYM 415 Query: 418 NNLAVI 423 N L VI Sbjct: 416 NGLKVI 421 >gi|323452508|gb|EGB08382.1| hypothetical protein AURANDRAFT_26104 [Aureococcus anophagefferens] Length = 495 Score = 322 bits (825), Expect = 7e-86, Method: Composition-based stats. Identities = 177/453 (39%), Positives = 260/453 (57%), Gaps = 28/453 (6%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ----SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 L+++ ++ + + + ++ R + + +++L E+ ++ + + R + S Sbjct: 41 LELRTLKDHADTVKAHVRARQGSEETVASVDRMVALTEQRAAAQRERDAALSTRKALSGD 100 Query: 58 IGQAIAEGNLS-LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 IG+A+ G V ALK E + + E + L + +PN+ + P G Sbjct: 101 IGKAMKTGAAEADVAALKAEVAASADVAEGAEATMAALEEEANALFAALPNLLDDATPDG 160 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEAL---GLMDFDRATKLSGARFSVLTGHLAH 173 EN+++ G + ++ + G D + A+K+SGARF+VL G +A Sbjct: 161 AGETENVVVAEWGTDSRKLGDEGDYLWHDDLAAGLGGFDAEAASKVSGARFAVLRGGVAR 220 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR------W 227 LERALG F +D+HT GY EVS+P++V A+ GTGQ+PKF DD+F + + + Sbjct: 221 LERALGAFFLDMHTDGGGYEEVSSPVIVARSALEGTGQLPKFEDDLFKLDNHKVRGEDAF 280 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LIPT+EV LTNL + +I+E LP+R L FR+EAGS GRDTRG++RQHQF K ELV Sbjct: 281 LIPTAEVPLTNLVAGDILEESDLPIRVAALTHCFRAEAGSYGRDTRGLVRQHQFAKVELV 340 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 I +D EHE +++ AE+ L+ LDL YR VSLC GD+GFSA + YDLEVWL G Y Sbjct: 341 KIVAPDDGVAEHEALVADAEKCLQMLDLPYRKVSLCAGDIGFSARRCYDLEVWLPGPQEY 400 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLK-------------FTHTLNGSGVAVGRCLI 394 REISSCS G++Q+RRM R+R +K F +T+NGSG+AVGR L+ Sbjct: 401 REISSCSLMGDYQARRMGLRFRPKPAKDDNDGGKKKKGKPKPLFPYTMNGSGLAVGRALV 460 Query: 395 AILENYLNADGSVTIPTVLRPYMNNLA-VIKKE 426 A+LEN+ N DGSVT+P LRPYM +I + Sbjct: 461 AVLENHQNPDGSVTVPRALRPYMGGAESIIPPK 493 >gi|320450406|ref|YP_004202502.1| seryl-tRNA synthetase [Thermus scotoductus SA-01] gi|320150575|gb|ADW21953.1| seryl-tRNA synthetase [Thermus scotoductus SA-01] Length = 422 Score = 322 bits (824), Expect = 9e-86, Method: Composition-based stats. Identities = 141/428 (32%), Positives = 231/428 (53%), Gaps = 11/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +R+NP+ A++ + + + +L+LD + + L ++++++ RN + ++ + Sbjct: 1 MVDLKHLRRNPDVYREAIRLKGVALDLDALLALDAEVQGLKARLQELQTERNRIAKEVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E L L E+ +E+ E + L +L+ +P P P+G + Sbjct: 61 APPEARPD----LVARGKALAEEAKRVEEALREKEAQLWELLLKVPLPPWPGAPVGPDDS 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ IR VG P +H + E G + R +++SG+R L G LA E AL + Sbjct: 117 ANVEIRRVGTPPEFSFPPLDHVSLLEKNGWWET-RISQVSGSRTYALRGDLALYELALIR 175 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 F +D GYT ++ P R++A GTG P D ++ +L T+EV L L Sbjct: 176 FAMDFMV-RKGYTPLTLPSYAREKAFIGTGHFPAARDQVWPIAGTDLYLTGTAEVVLNAL 234 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 +S EI++ + LP R+ AP+FRSEAGS G+D RG++R HQF K E +T E S Sbjct: 235 HSGEILQQEELPKRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDQ 294 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + +L AEEIL L+L YR++ + TGD+G + DLEVW+ + YRE SCS Sbjct: 295 AFQELLQNAEEILGLLELPYRLLEVSTGDMGPGKWRQVDLEVWVPSEGRYRETHSCSALL 354 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR + RYRD + +++ +TLN + +A R L+ +LEN+ DG V +P L PY+ Sbjct: 355 DWQARRADLRYRDKEGR-VQYAYTLNNTALATPRILVMLLENHQLPDGRVRVPEALVPYL 413 Query: 418 NNLAVIKK 425 V++ Sbjct: 414 -GKEVLEP 420 >gi|296393034|ref|YP_003657918.1| seryl-tRNA synthetase [Segniliparus rotundus DSM 44985] gi|296180181|gb|ADG97087.1| seryl-tRNA synthetase [Segniliparus rotundus DSM 44985] Length = 423 Score = 322 bits (824), Expect = 9e-86, Method: Composition-based stats. Identities = 170/426 (39%), Positives = 246/426 (57%), Gaps = 18/426 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D+ + PE L +R + + SL E+ + L ++ +++RA+ + Sbjct: 1 MHDLDVLLT-PEA-AAKLARRGYQLDIARLESLREQRKALRRQADELRAQVRALGK---- 54 Query: 61 AIAEGNLSLVDALKNE-TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 G ++ E +KEQ+ E E+ ++L+ + IPN+P + P G Sbjct: 55 ---AGKDAVDKQAHAEHARAVKEQVRETEAALDELEAALRAELLTIPNLPSDAAPEGLRE 111 Query: 120 NENILIRSV-----GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 ++ ++R V ++H +GE LG++D RA KLSG RFS L G A L Sbjct: 112 SDYQIVRVVGEQQTFDPAEYPDGPKDHVALGEQLGILDLGRAVKLSGPRFSFLKGQGARL 171 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTS 232 ERAL F +DLHT EHGY E S PL+V + + G+GQ+PKF +D+F T + ++LIPT+ Sbjct: 172 ERALASFFLDLHTREHGYEEFSVPLIVGAQTLTGSGQLPKFGEDLFKIATGEPQYLIPTA 231 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV L N Y+ E + + +LP+ T + FRSEAGS GRDT+G+LRQHQF K ELV + Sbjct: 232 EVPLVNYYAGEFLGADALPIAATAHSSCFRSEAGSYGRDTKGILRQHQFSKVELVRVVLP 291 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E + + E ML AE L+ L LHYRV+ L GDLGF+A +T+D+E WL QN YREISS Sbjct: 292 EHAQAQQELMLGHAERCLRELGLHYRVIDLPAGDLGFTAERTFDIEAWLPSQNAYREISS 351 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S+C +FQSRR R + + + + + TLNGS + +GR +IAILE + DGSV +P Sbjct: 352 VSSCADFQSRRNGLRVKGKDGERI-WPATLNGSALPIGRTVIAILEQFQQPDGSVLVPEA 410 Query: 413 LRPYMN 418 LR +M Sbjct: 411 LRGFMG 416 >gi|237836223|ref|XP_002367409.1| seryl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|211965073|gb|EEB00269.1| seryl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|221505903|gb|EEE31538.1| seryl-tRNA synthetase, putative [Toxoplasma gondii VEG] Length = 482 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 136/468 (29%), Positives = 217/468 (46%), Gaps = 47/468 (10%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSA 56 +D+ +R +P + + +R + + +++D+K R + ++E ++ N+ + Sbjct: 3 IDVNLLRAEKGGDPALVRDSEVRRGRSGEVVDQAVAVDKKWRENLFQLEQLKKELNAVNK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +IGQ + L +++ LK++LP +E E + L+ I N+ + VP+ Sbjct: 63 EIGQRKKKDAKDPCQDLLAKSAELKQRLPTIEAAATEAEEKRESLLHKIGNIVHKSVPVS 122 Query: 117 TSANENILIRSVGKKPSAIHL-----SREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 N ++R+ G + + H +I LG +DF + + +G R L G Sbjct: 123 NDEVNNQVVRTWGTFDRNLKIDGTPGRMHHHQILARLGGVDFKKGVEAAGHRGYFLKGAG 182 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------ 225 L AL Q+ + GYT V P +R E M ++ F + ++ Sbjct: 183 MLLNLALAQYGLAFLL-RKGYTPVQPPFFMRKEVMARAAELKDFEETLYRIPHNQTGGSA 241 Query: 226 ----------------------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 +LI TSE L +L+ +E +E K LP+R+ + FR Sbjct: 242 DSKEGAEKNGEKKNEKDADRDDLFLIATSEQPLCSLHMNETLEEKELPIRYAGYSSCFRK 301 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 EAGS G+D G+ R HQF K E IT E+S+ HE M+ AEE + L+L YRVVS+ Sbjct: 302 EAGSHGKDCWGIFRIHQFEKVEQFCITTPEESWKMHEDMIGMAEEFYQTLELPYRVVSIV 361 Query: 324 TGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY-------RDPNSKSL 376 +G L +A K YDLE W G +RE+ SCS C ++Q+R ++ R + + Sbjct: 362 SGALNDAAAKKYDLEAWFPGYGDFRELVSCSNCTDYQARALDIRLAHKSSSAKGADRNEK 421 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 H LNG+ VA RCL ILENY G V +P VL PYM + Sbjct: 422 AHVHMLNGTLVATQRCLCCILENYQTPLG-VKVPRVLVPYMGGAEFLP 468 >gi|145253905|ref|XP_001398465.1| seryl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88] gi|134084041|emb|CAL00579.1| unnamed protein product [Aspergillus niger] Length = 474 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 124/440 (28%), Positives = 211/440 (47%), Gaps = 20/440 (4%) Query: 1 MLDI-QWIRQ---NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ +I +P + + +KR+ + +LSL E+ R ++ I ++ N+ Sbjct: 1 MLDLADFISDRGGDPNKIKESQRKRYAPESVVDEVLSLYEEARRARYEVMQINSQLNALQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ N + L + + L++ E+ + I I N+ + VP+ Sbjct: 61 KEIGKRKK--NKEDANDLMEQKANLEKSKKDAEELAIQKEKQRDSKIRTIGNIVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + ++N +IR + H E+ L D +R K+ G R LTG+ Sbjct: 119 SNNEDDNAVIRKWAPDNVKVEKRNCLSHHEVLTRLDGFDSERGVKVVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALINYGLEF-LWGKGYKPNQPPQFMLKDMMAKTAQLEQFDEELYKVTESEDKSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E ++ K LP+++ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ EDS+ + M++ +EE + L L Y+VV++ +G L +A K YDLE W Q Y Sbjct: 298 VLTKPEDSWQAFDEMMATSEEFYRSLGLPYQVVAIVSGALNNAASKKYDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++QSR + RY + + H LN + A R L +LENY DG Sbjct: 358 KELVSCSNCTDYQSRALEIRYGTKKATDVKKSYVHALNATLCATERTLCCVLENYQTDDG 417 Query: 406 SVTIPTVLRPYMNNL-AVIK 424 + +P LR Y+ I Sbjct: 418 -IIVPEPLRKYIPGAPEFIP 436 >gi|270284441|ref|ZP_06193999.1| serine--tRNA ligase [Bifidobacterium gallicum DSM 20093] gi|270276877|gb|EFA22731.1| serine--tRNA ligase [Bifidobacterium gallicum DSM 20093] Length = 392 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 130/394 (32%), Positives = 214/394 (54%), Gaps = 11/394 (2%) Query: 37 NRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCS 96 R +K+ E RA++ Q+ +A A+ L T L E++ + + Sbjct: 2 RRASLKEFEAARAQQKEIGKQVAKASADEKAE----LIKRTKELSERVSQFKADADAATE 57 Query: 97 SLKKLISCIPNVPLEEVPIGTSANENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFD 154 + + N+ E P G + ++ + + + ++H +G + +D + Sbjct: 58 QYTTAMWKLSNIVEPEAPEGGEDDYVVVKKVGQIRDFAAEGFEPKDHLTLGRGVAGIDME 117 Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 R K++G+RF L G +A L+ A+ +D EHG+T P LVR E M GTG + Sbjct: 118 RGVKVAGSRFYFLRGAIARLQIAMLTMAVD-QADEHGFTLAITPTLVRPEVMRGTGFLNS 176 Query: 215 FADDMFC--TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 AD+++ D ++L+ TSEV+L ++ EI++ + PLR+ + +R EAGSAG+DT Sbjct: 177 HADEIYRLREPDDQYLVGTSEVALAGMHEDEILDLSNGPLRYCGWSSCYRREAGSAGKDT 236 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 +G++R HQF K E+ + EDS+ EH+ +L+ EE+L ++++ YRV+ GDLG SA Sbjct: 237 QGIIRVHQFDKVEMFVYAKPEDSYDEHKHLLAMEEEMLGKVEVPYRVIDTAAGDLGSSAA 296 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 + +D E W+ Q YRE++S S C +Q+RR+N R R + + TLNG+ +A R Sbjct: 297 RKFDCEAWVPTQGRYRELTSTSNCTQYQARRLNIRERIADGG-TEPVATLNGT-LATTRW 354 Query: 393 LIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 L+AI+EN+ DGS+ IPT +RPYM VI+ Sbjct: 355 LVAIMENHQQKDGSIVIPTAMRPYMGGKEVIEPT 388 >gi|58013129|gb|AAW62996.1| seryl-tRNA synthetase [synthetic construct] Length = 436 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 145/428 (33%), Positives = 233/428 (54%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +RQ PE A++++ + E +L++D + + L K++++++ RN + ++ + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDREVQELKKRLQEVQTERNQVAKRVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E +AL L E+ LE+ E + L+ L+ +P P P+G Sbjct: 61 APPEEK----EALIARGKALGEEAKRLEEALREKEAKLEALLLQVPLPPWPGAPVGGEEA 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + R VG P +H + E G + R +++SG+R L G LA E AL + Sbjct: 117 NREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RISQVSGSRSYALKGDLALYELALLR 174 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 F +D G+ ++ P R++A GTG P + D ++ +L T+EV L L Sbjct: 175 FAMDFMA-RRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNAL 233 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 +S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S Sbjct: 234 HSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDR 293 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS Sbjct: 294 AFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALL 353 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM Sbjct: 354 DWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM 412 Query: 418 NNLAVIKK 425 V++ Sbjct: 413 -GKEVLEP 419 >gi|50292585|ref|XP_448725.1| hypothetical protein [Candida glabrata CBS 138] gi|49528037|emb|CAG61688.1| unnamed protein product [Candida glabrata] Length = 458 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 129/441 (29%), Positives = 207/441 (46%), Gaps = 26/441 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + NPE + + K R+ + + I++ + +++++ + N Sbjct: 1 MLDINQFIEEKGGNPELIRQSQKARYASVELVDEIIADYKDWVKTRFELDELNKKLNKLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG L E L E+ L ++E + L++ ++ I N+ V + Sbjct: 61 KDIGMKFKA--KEDASELLAEKDKLSEEKKQLIEKEQKEDKDLRQKVNQIGNIVHPSVVV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSR----------EHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + A H EI L D +R K+SG R Sbjct: 119 SNDEENNELVRTWKPEGLADVGPVASVTGKPAALSHHEILLRLDGYDPERGVKISGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 + L +AL + + + GY + AP+++ E M T Q+ +F ++++ D Sbjct: 179 FFRNYGVFLNQALINYGL-HFLASKGYIPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ +S E E LP+R+ + FR EAGS G+D G+ R H Sbjct: 238 EDEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGSHGKDAWGVFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E IT E S+ E +RM++ +EE + L L YRVV + +G+L +A K YDLE W Sbjct: 298 FEKIEQFCITEPEKSWEEFDRMIANSEEFYQSLKLPYRVVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + N + K+ H LN + A R L +LE Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRSGIKKMNDREKKYVHCLNSTLAATQRALCCVLE 417 Query: 399 NYLNADGSVTIPTVLRPYMNN 419 NY DG + +P VLR Y+ Sbjct: 418 NYQTEDGLI-VPEVLRKYIPG 437 >gi|197294640|ref|YP_001799181.1| seryl-tRNA synthetase [Candidatus Phytoplasma australiense] gi|171853967|emb|CAM11930.1| Seryl-tRNA synthetase [Candidatus Phytoplasma australiense] Length = 418 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 160/429 (37%), Positives = 253/429 (58%), Gaps = 15/429 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD+ ++ +N H+ L+ R+ + + L + + L+ KI+ +R ++N + QI Sbjct: 1 MLDLNYVVKNLSHVLTKLETRNHPLDDLKKLPLLSSQRKELLLKIQKLRQQKNKTA-QI- 58 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N + L + + K LE++ V +++ ++S PN+P + +PIG Sbjct: 59 ------NATQPQNLLKKDND-KSLTRHLEEQLKTVETAIYDILSNTPNLPHDSLPIGKDE 111 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N I G P ++H + + L ++DF++A K++G+RF V G A LERAL Sbjct: 112 QANQEISRHGVIPQFDFPVKDHVALAKKLDILDFEKAAKITGSRFVVCKGLGARLERALI 171 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVSL 236 QFM+DLH S GY E+ P ++ +++M+ TGQ+PKF ++F + +L PT+EV Sbjct: 172 QFMMDLH-STKGYQEIIPPYIINEKSMFATGQLPKFEAEVFKISHHKNNWYLNPTAEVPT 230 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 NL+ E +LPL++ SFR EAGSAG +RG+ RQHQF K EL+ ++S+ Sbjct: 231 INLHRDEFFPRNALPLKYVAYTTSFRQEAGSAGSYSRGIFRQHQFNKVELIQFCHPQNSY 290 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + ++ML + +L L L YRV+ L TGDLGF KTYD+EV++ N YREI+S S Sbjct: 291 SLLDQMLQDSCAVLDLLKLPYRVIVLSTGDLGFGMSKTYDIEVFIPSSNCYREIASISNS 350 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQSRR N ++ +PN+ ++ H LNGSG+A+GR +IAILENY N+DG++ +P VL P+ Sbjct: 351 ESFQSRRANIKFHNPNNNKKEYLHILNGSGLAIGRTVIAILENYQNSDGTIRVPEVLIPF 410 Query: 417 MNNLAVIKK 425 + +IK+ Sbjct: 411 L-GTDIIKR 418 >gi|187918098|ref|YP_001883661.1| seryl-tRNA synthetase [Borrelia hermsii DAH] gi|119860946|gb|AAX16741.1| seryl-tRNA synthetase [Borrelia hermsii DAH] Length = 441 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 139/432 (32%), Positives = 229/432 (53%), Gaps = 13/432 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+++IR N E + +K R L+ + ++S D++ R L+ KI ++ A + + Sbjct: 18 MLDLKFIRDNLELIQKNIKDRGLKLNLDLLISFDDERRKLVTKIGELNA---ARNENANA 74 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + S + L LK ++ +LE++ + + S L IPN+ +VP+G + Sbjct: 75 MKEKMDDSRRNYLIETGKALKSEIAVLEEKLNYIASRLLIEHKQIPNIAAPDVPVGEGED 134 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++++ G P ++H IG L L DF+RA ++SG +F L LE AL Sbjct: 135 GNVVLKLSGNIPKFDFKPKDHLAIGIDLDLFDFERAGEVSGNKFYYLKNEAVFLELALIN 194 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD--MFCTTDGRWLIPTSEVSLTN 238 F ++ G+ P + R+ + G G P+ + ++L+ T+E++L Sbjct: 195 FALN-KLKLKGFDLFITPDVAREFIVDGIGFNPRGTESNIYKIEDTDKYLVGTAEITLGG 253 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y + I++ KS PLR L+ FR EAG+AG+ ++G+ R HQF K E+ + + EDS Sbjct: 254 YYYNTILDLKS-PLRMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCLCKSEDSDRI 312 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCST 355 H L+ EEI L++ YRV+++C+ DLG A K YD+E W+ G+ Y E++S S Sbjct: 313 HNEFLALEEEIFTELEIPYRVLNVCSFDLGAPAYKKYDIEAWMPGRGDNGEYGEVTSTSN 372 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++QSRR+ RY+D KF H +NG+ +A R +IAILEN+ + G V IP L Sbjct: 373 CTDYQSRRLKIRYKD--DGQSKFVHMINGTAIASTRTIIAILENFQDERGGVRIPKNLVK 430 Query: 416 YMNNLAVIKKEH 427 Y I ++ Sbjct: 431 YT-GFDYISPKN 441 >gi|254671651|emb|CBA09379.1| Seryl-tRNA synthetase [Neisseria meningitidis alpha153] Length = 291 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 157/282 (55%), Positives = 204/282 (72%), Gaps = 8/282 (2%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 DF+ KLSGARF+V+ G +A L RAL QFM+D HT +HGYTE P +V D + GTGQ Sbjct: 11 DFEGGAKLSGARFTVMRGQIARLHRALAQFMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQ 70 Query: 212 IPKFADDMFCTTD-------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 +PKFA+D+F T ++LIPT+EV+LTN + II S+ LPL+ T +P FRSE Sbjct: 71 LPKFAEDLFHVTRGGDESKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSE 130 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 AGS G+DTRG++RQHQF K E+V I E S+ E M+ AE ILK L+L YRV++LCT Sbjct: 131 AGSYGKDTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCT 190 Query: 325 GDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNG 384 GD+GF A KTYDLEVW+ QN YREISSCS C +FQ+RRM +R++D N K+ + HTLNG Sbjct: 191 GDMGFGATKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKN-RLVHTLNG 249 Query: 385 SGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 SG+AVGR L+A+LEN+ NADGS+ IP L+PYM +A ++ + Sbjct: 250 SGLAVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK 291 >gi|330469508|ref|YP_004407251.1| seryl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328812479|gb|AEB46651.1| seryl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 426 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 152/436 (34%), Positives = 232/436 (53%), Gaps = 21/436 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKR----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD++ IR++ + + AL KR ++ + I LD + R LI +I+ R RR + + Sbjct: 1 MLDMELIRKDRDAVATALAKRLDAAEVDRALDEIQHLDRERRRLITEIDGERQRRKAEAR 60 Query: 57 QIGQAIAEGNLSLV--DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 QA G V + + + + L E E +V S L+ ++S +PN+P ++V Sbjct: 61 AYAQAKRAGVEPQVTDETGRKQVAEL-------EAELDQVQSRLRTVMSELPNLPADDVL 113 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 G ++ P AI R+H E+ L L+D +R KL G+ F + TG A L Sbjct: 114 PGGKEANRVVKTF--GAPPAIEKIRDHVELSRMLALVDHERGVKLGGSGFWMYTGLGARL 171 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----RWLI 229 E AL ++I+ + E GY + P L+ D A + GQ PKF DD++ ++L+ Sbjct: 172 EWALINWLIERNI-EAGYEFLLPPHLLLDTAGFAAGQFPKFYDDVYHLDKQSAPRGQFLL 230 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT+E ++ Y EI+++ SLPL+ P +R EA + D RG +R HQF K E+ Sbjct: 231 PTAETAILGAYQDEILDTASLPLKVFAYTPCYRREAAGSHSDERGTVRGHQFNKVEIFQF 290 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T E + E+M++ AE +++ L LHY+ L GD S KT D+EVW+ Y+E Sbjct: 291 TLPEQADAALEQMVAHAESLVEGLGLHYQRSLLAAGDSSASMRKTLDIEVWMPSTGKYKE 350 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 +SS S G++Q+RR RYR+P K +F HTLNGS +A R L AILE + DGSV + Sbjct: 351 VSSVSWGGDYQARRAAIRYREPGGKQTRFVHTLNGSALATSRLLPAILEQFQQPDGSVLV 410 Query: 410 PTVLRPYMNNLAVIKK 425 P VLRP + + + Sbjct: 411 PEVLRPRLGTDRLTPR 426 >gi|254796923|ref|YP_003081760.1| seryl-tRNA synthetase [Neorickettsia risticii str. Illinois] gi|254590159|gb|ACT69521.1| seryl-tRNA synthetase [Neorickettsia risticii str. Illinois] Length = 415 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 176/424 (41%), Positives = 257/424 (60%), Gaps = 9/424 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D+++I NPE +K+R +++L E+ + + + +++A +N + Q Sbjct: 1 MNDLEYIVSNPEVFTEMMKRRGASFNPLPLITLYEERKSCVTSLNNLQASKNELTKSF-Q 59 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 I EG L + + +++ ++++ ++C L+ ++ +PN+ E+VPIG + Sbjct: 60 VIQEGKGE----LFEKAKVIDKEILRVKEDLQKICEQLELMMLDLPNILAEDVPIGENDR 115 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++++S G + H E+G ALG++DF K+SGARFS G A L R L Sbjct: 116 SNVVVKSWGVVRDFGFEPKAHDELGVALGILDFLNVAKVSGARFSGFIGKGARLFRVLKD 175 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D +T EHG+ E P LV+++AMY GQ+PKF+ + F G L+PTSEV+L N Sbjct: 176 FMLDHNT-EHGHREYFLPYLVKEDAMYKAGQLPKFSQESFRVDGGMRLVPTSEVTLLNFV 234 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S LPLR T+ + FRSEAGS+G+DT+G++RQHQF K EL+SIT E S E E Sbjct: 235 SDNFFGEAELPLRMTSYSECFRSEAGSSGKDTKGIIRQHQFGKVELLSITEPEKSDEELE 294 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML AE +L++L L YRVV+LC+GD+GF + KTYD+EVW+ Q YREISSCS CG+FQ Sbjct: 295 RMLCIAEGLLQKLKLPYRVVNLCSGDIGFCSKKTYDIEVWIPSQCCYREISSCSNCGDFQ 354 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 SRR+ + K F HTLN S +A+GR ++AILENY DGS+ +P VLR Sbjct: 355 SRRLAI--KYKFKKKKGFLHTLNASSLAIGRTIVAILENYQMHDGSIEVPEVLRSRF-GA 411 Query: 421 AVIK 424 IK Sbjct: 412 DFIK 415 >gi|16081587|ref|NP_393946.1| seryl-tRNA synthetase [Thermoplasma acidophilum DSM 1728] gi|13878795|sp|Q9HKX5|SYS_THEAC RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|10639638|emb|CAC11610.1| probable seryl-tRNA synthetase [Thermoplasma acidophilum] Length = 441 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 136/447 (30%), Positives = 228/447 (51%), Gaps = 29/447 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R N E + + R ++ E LDE+ R + +++ +R+++N + +I Sbjct: 1 MIDVKLLRSNRELFEKNCEYRGVDKAPVEDFFRLDEEWRSINRELNGLRSQKNRETRKIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + I + + K + ++ LE + ++ +++ IPN+ E VP+ Sbjct: 61 ELIKNNGDASAE--KKAVEDINARISDLENKLKKIEEERDRILWTIPNLVHESVPVCFGD 118 Query: 120 NENILIRSVGKKPSA--------------------IHLSREHFEIGEALGLMDFDRATKL 159 N L+R VG + H ++G L ++D + A ++ Sbjct: 119 ENNQLVRYVGHAKVFRDDIEEFKKNSGNSQDYEVLDERPKSHVDLGLDLNVIDLESAARI 178 Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 SG+RF + L LE AL + +D S+ G++ V P ++ E+M G + F D + Sbjct: 179 SGSRFYFIKNRLLKLEMALENYAVDF-LSQRGFSIVEPPYMLNLESMRGATDLETFKDTL 237 Query: 220 FCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + + +LI TSE S+ + S++ +E K LPLR ++ FR EAG+ G+DT+G+ R Sbjct: 238 YKIEGEDLYLIATSEHSIAAMLSNQFLEEKDLPLRVAGISACFRREAGAHGKDTKGIFRV 297 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 HQF K E + EDS+ E +L AE I + L + YRVV++C+G+LG A K YD+E Sbjct: 298 HQFNKIEQFVFCKPEDSWDFLEEILGNAEAIYRSLGIPYRVVNVCSGELGRLAAKKYDIE 357 Query: 339 VWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 W Q +REI S S ++Q+R +N +YR +F HTLN + +A R L+AI+E Sbjct: 358 AWFPAQGKFREIVSASNDTDYQARSLNIKYRTSEGN--RFVHTLNSTAIATTRILVAIME 415 Query: 399 NYLNADGSVTIPTVLRPYMNNLAVIKK 425 N+ D + IP VL PY I+K Sbjct: 416 NFQEGD-RIRIPDVLVPYT-GFQYIEK 440 >gi|281206264|gb|EFA80453.1| seryl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 454 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 134/439 (30%), Positives = 215/439 (48%), Gaps = 19/439 (4%) Query: 2 LDIQWIRQ-----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 LDI R NP+ + ++ ++R + + ++ LD K R +++ A + Sbjct: 10 LDIVMFRAPDKGGNPDLIRLSQERRFKPVETVQTVIDLDMKLRDAKYRLDQTNAEYTKVN 69 Query: 56 AQIGQAIAEGNL-SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 ++ G VD L + + + + + E + LKK I I N+ E VP Sbjct: 70 KELAIKKKAGESGEEVDKLVARAAEIDKNIVAYKLECAQAEDELKKAIKPIGNIVHESVP 129 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 + + + N ++R+ G +P H E+ E + D R T +SG R L G L Sbjct: 130 VSNNEDNNQVVRTWG-EPKTQKDLLHHHELLEMIDGYDLVRGTNVSGHRCYFLKGVGVEL 188 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------TDGRW 227 A+ + + + YT + P +R E M T Q+ +F ++++ + ++ Sbjct: 189 NLAIINYGLAF-LKKRSYTHLQTPFFMRKEIMAETAQLEQFDEELYKIVGGAQGEENEKY 247 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE +++ + E IE K LP ++ + FR EAG+ GRD G+ R HQF K E Sbjct: 248 LIATSEQPISSYHRGEWIEEKDLPKMYSGYSTCFRKEAGAHGRDVWGIFRVHQFEKIEQF 307 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 IT+ EDS+ HE+M++ AE + L L Y+V+S+ +G L +A K YDLE W G N Y Sbjct: 308 VITKPEDSWAMHEQMIATAEAFYQELGLPYQVISIVSGALNNAAAKKYDLEGWFPGYNQY 367 Query: 348 REISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 RE+ SCS C ++QSR + R + + K+ H LN + A R + ILENY G Sbjct: 368 RELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENYQTE-G 426 Query: 406 SVTIPTVLRPYMNNLAVIK 424 + +P VL+PYM + I Sbjct: 427 GINVPKVLQPYMGGVEFIP 445 >gi|294661131|ref|YP_003573006.1| hypothetical protein Aasi_1519 [Candidatus Amoebophilus asiaticus 5a2] gi|227336281|gb|ACP20878.1| hypothetical protein Aasi_1519 [Candidatus Amoebophilus asiaticus 5a2] Length = 434 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 148/427 (34%), Positives = 235/427 (55%), Gaps = 9/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML+I +I++N + L KR + E IL+++++ + ++ ++ N + Q Sbjct: 12 MLEINYIQENKTSVIAKLHKRHLYNAADLIENILTINQQRKETQLALDTTSSQVNQLTKQ 71 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I Q + EG ++++K+++ LK + LE + + +L++ + +PN+P + VPIG Sbjct: 72 IEQLLQEGKKQEIESIKSQSKVLKASVKELELQLNTYKETLQQKLDELPNLPHDNVPIGK 131 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + N ++ V P H+E+ ++DF+ KL+GA F V G A L+RA Sbjct: 132 DSTSNEIVYQVESIPEHTAQLIPHWELITTYNIIDFELGNKLTGAGFPVYKGKGARLQRA 191 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSL 236 L F +D + GY E+ P+LV + YGTGQ+P M+ + +LIPT+EV + Sbjct: 192 LINFFLDE-ARKAGYEEIQPPILVNKASAYGTGQLPDKEGQMYELANEPLYLIPTAEVPV 250 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY +I+ LP+R P FR EAGS G RG+ R HQF K E+V I+ E S+ Sbjct: 251 TNLYRDQILSKDVLPIRHVAYTPCFRREAGSWGSHVRGLNRLHQFDKVEIVEISLPELSY 310 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E M E ++++L+L YRV+ LC+GDLGF++ TYD+EV+ GQN + E+SS S Sbjct: 311 QALETMRRYVESLVQKLELPYRVLKLCSGDLGFASAFTYDIEVFSVGQNRWLEVSSISNY 370 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+ RM RY+D + + HTLNGS +A+ R + A+LE G + IP L Y Sbjct: 371 DTYQANRMQLRYKD--NGHNRLLHTLNGSAIALPRIMAALLELNFTE-GKIKIPHALTKY 427 Query: 417 MNNLAVI 423 + I Sbjct: 428 TD-FEYI 433 >gi|290990879|ref|XP_002678063.1| seryl-tRNA synthetase [Naegleria gruberi] gi|284091674|gb|EFC45319.1| seryl-tRNA synthetase [Naegleria gruberi] Length = 474 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 126/473 (26%), Positives = 215/473 (45%), Gaps = 51/473 (10%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI +R+ NPE + + ++RH + + ++ LD + R L ++ I+ N S Sbjct: 1 MLDINLLREYKNGNPEIVRESQRRRHKDVALVDKVIELDAEWRKLTGEVNGIKNLGNIVS 60 Query: 56 AQIGQAIAEGNL--SLVD----------------------------ALKNETSTLKE-QL 84 ++GQ + ++ LK ++ + E + Sbjct: 61 KEVGQRMKAKQPLGDDIEIPQEILATVDKNFTKETLESVFPQLNTNQLKKLSNHITEVHV 120 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI----HLSRE 140 + + +++ + N+ E V + + + N ++R VG + + Sbjct: 121 KQADTDASNKEKERDEVLLQLGNLVHETVVVSDNEDNNGIVRLVGNPRPKVDDSGFKCLK 180 Query: 141 HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 H +I LG + + T++ G R L G L L AL + I T E G+ + P Sbjct: 181 HIDIMRKLGCLATEEGTQVGGGRGYFLMGDLVRLNLALQNYAIQFLT-EKGFCPMYTPFF 239 Query: 201 VRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTL 257 + + M Q+ +F ++++ + + ++LI TSE + + + + LPL++ + Sbjct: 240 MTKDQMKRVAQLSQFDEELYTVSGEGEDKYLIATSEQPIAAFHLDKRFDESELPLKYCGM 299 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDL 315 + FR E G+ G+DT G+ R HQF K E +T S+ E M+ +E + L L Sbjct: 300 STCFRKEVGAHGKDTLGIFRVHQFEKIEQFVVTSPKDNKSWEMFEDMIGNSEAFYQSLGL 359 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQ---NLYREISSCSTCGNFQSRRMNSRY-RDP 371 YRVV++ +G L +A K DLE W G N YRE+ SCS C ++Q+RR+N RY + Sbjct: 360 SYRVVNIVSGALNNAAAKKLDLEAWFPGAEEGNEYRELVSCSNCTDYQARRLNVRYGKAA 419 Query: 372 NSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 +F H LN + A R + I+ENY +G V IP VL+PYM I Sbjct: 420 TKGDAEFCHMLNSTLSATSRTICCIVENYQTPEG-VNIPEVLQPYMGGTKFIP 471 >gi|310792722|gb|EFQ28183.1| seryl-tRNA synthetase [Glomerella graminicola M1.001] Length = 456 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 126/442 (28%), Positives = 214/442 (48%), Gaps = 22/442 (4%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+Q +I++ +P+ + + ++RH + + +++L + +R + N+ Sbjct: 1 MLDLQDFIKERGGDPDKIRESQRRRHAPVEIVDEVIALWDDHRKTQYAATQFGSEINAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N D L + L++Q E E +L I N + VP+ Sbjct: 61 KEIG--MKKKNKENADDLLKKKEDLQKQKKDKEDEAAAKLVALNAKAKSIGNYVHDSVPV 118 Query: 116 GTSANENILIRSVGKKP---SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 + + N+ R + + + H ++ L D +RA KL G R LTG+ Sbjct: 119 SDNEDNNVTERKWEPEAGLGAKTEQTLSHHQVVTRLAGYDSERAIKLVGHRGYCLTGYGL 178 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLI 229 L +AL + ++ GYT P + M T Q+ +F ++++ T + ++LI Sbjct: 179 FLNQALINYGLEF-LFNKGYTPNQPPFFMNRNQMAKTAQLEQFDEELYKVTGDGEEKYLI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 TSE L+ L+S E +++ LP+++ + FR EAG G++ G+ R HQF K E Sbjct: 238 ATSEQPLSALHSEEWLQASQLPIKYAGYSTCFRKEAGKHGKEAWGLFRVHQFEKIEQFVF 297 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + E+S+ + M++ +EE K L L YRVVS+ +G L +A K YDLE W Q Y+E Sbjct: 298 CKAEESWKHFDEMIAASEEFYKSLGLPYRVVSIVSGALNNAAAKKYDLEAWFPFQQEYKE 357 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSK------SLKFTHTLNGSGVAVGRCLIAILENYLNA 403 + SCS C ++Q+R + RY +K + H LN + A R L I+ENY Sbjct: 358 LVSCSNCTDYQTRELEVRYGVKKAKEAPGAGRKDYVHALNATLCATERTLCCIMENYQTP 417 Query: 404 DGSVTIPTVLRPYMNNL-AVIK 424 DG + +P VLR Y+ + Sbjct: 418 DG-LKVPEVLRKYIPGQPEFLP 438 >gi|156844517|ref|XP_001645321.1| hypothetical protein Kpol_1037p60 [Vanderwaltozyma polyspora DSM 70294] gi|156115981|gb|EDO17463.1| hypothetical protein Kpol_1037p60 [Vanderwaltozyma polyspora DSM 70294] Length = 458 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 128/447 (28%), Positives = 213/447 (47%), Gaps = 27/447 (6%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ +I + NP+ + + K R+ + + I++ + +++++ + N Sbjct: 1 MLDVNQFIVEKGGNPDLIKESQKARYASVELVDEIIADYKNWVKTRFELDELNKKLNKLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG L E + ++ L ++E + LK ++ I N+ V + Sbjct: 61 KDIGLKFKT--KEDASELLAEKDKINDEKKQLIEKEQQEDKDLKYKVNQIGNIVHPSVVV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSR----------EHFEIGEALGLMDFDRATKLSGARFS 165 + N L+++ + H EI L D +R K+SG R Sbjct: 119 SNDEDNNELVKTWKPEGLEEVGPIASATGKPAALSHHEILLRLDGYDPERGVKISGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--- 222 L + L +AL + ++ +++GY + AP+++ E M T Q+ +F ++++ Sbjct: 179 FLRNYGVFLNQALINYGLNF-LAKNGYVPLQAPVMMNKEVMARTAQLSQFDEELYKVIDG 237 Query: 223 TDGRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 D ++LI TSE ++ +S+E E LP+R+ + FR EAGS G+D G+ R H Sbjct: 238 DDEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYVGYSTCFRREAGSHGKDAWGIFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E S+ E ++M++ +EE K L L YRVV + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVLTEPEKSWEEFDKMINHSEEFYKSLKLPYRVVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + + K+ H LN + A R L ILE Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLSATQRALCCILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNNL-AVIK 424 NY DG + IP VLR YM I Sbjct: 418 NYQTEDGLI-IPEVLRKYMPGEPEFIP 443 >gi|170094981|ref|XP_001878711.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646015|gb|EDR10261.1| predicted protein [Laccaria bicolor S238N-H82] Length = 452 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 127/440 (28%), Positives = 204/440 (46%), Gaps = 21/440 (4%) Query: 2 LDIQWIRQNP----EHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI N E + + +KR + + I+ + L + +R + N Sbjct: 3 LDILSFIDNKGGNAEEIRESQRKRGHSVELVDEIVQMYADWVKLDFETNALRKKVNEVQK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I D L + Q+ +KE E ++ + N+ + PI Sbjct: 63 EISAKKKA--KEPADDLVAAKKEIDAQVEAKKKEAKEFEIKMRAKACTVGNIVGKNAPIS 120 Query: 117 TSANENILIRSVGK-----KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 + ++N +R+ P+ H E+ L MD +R K++G R LT Sbjct: 121 LTEDDNTTLRTWDPLGETDDPAPRPGILPHHEVLLKLDAMDLERGAKIAGHRGYYLTNDG 180 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWL 228 L +AL + +D +HGY ++ P ++ + M T Q+ +F ++++ D ++L Sbjct: 181 VDLNQALISYGLDF-LRKHGYKKIQPPFMMNKDQMAKTAQLDQFDEELYKVIGSDDEKYL 239 Query: 229 IPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 I TSE ++ +S E ES LP+++ + FR EAGSAGRD G+ R HQF K E Sbjct: 240 IATSEQPISGYHSDEWFESPDTQLPIKYAGYSTCFRKEAGSAGRDMWGIFRVHQFEKVEQ 299 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 I+ E S+ + M+ +E + L L YRVV + +G L +A + DLE W Q Sbjct: 300 FVISDPEKSWEMLDVMIGNSEAFYQSLGLRYRVVGIVSGALNLAAAQKCDLEAWFPFQRA 359 Query: 347 YREISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 Y+E+ SCS C ++QSRR+ R ++ + + H LNG+ A R L ++ENY + Sbjct: 360 YKELVSCSNCTDYQSRRLEIRCGLKNKDQTRKVYVHMLNGTLCATERALCCLVENYQTPE 419 Query: 405 GSVTIPTVLRPYMNNLAVIK 424 G V IP VLRPYM I Sbjct: 420 GLV-IPEVLRPYMQGRDFIP 438 >gi|41406295|ref|NP_959131.1| seryl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis K-10] gi|67461823|sp|Q745I8|SYS_MYCPA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|41394643|gb|AAS02514.1| SerS [Mycobacterium avium subsp. paratuberculosis K-10] Length = 425 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 150/429 (34%), Positives = 237/429 (55%), Gaps = 13/429 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R +P + +L+ D R I + +RA + S S +G Sbjct: 1 MIDLKLLREDPDAVRRSQQSRGEDPSLVDALLAADAARRAAISTADTLRAEQKSASKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E + L L EQ+ E + E ++ I NV ++ VP G Sbjct: 61 AASPEQRPA----LLARAKELAEQVKAAETAQAEAEAAFTAAHLAISNVVIDGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L V +P+A+ R+H E+GE LGL+D R K+SG+RF LTG A L+ L Sbjct: 117 DFAVLD--VVGEPTALENPRDHLELGETLGLIDMARGAKVSGSRFYFLTGKGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 Q + L E+G+ + P+LVR E M GTG + A++++ D +L+ TSEV L Sbjct: 175 QLALRLAV-ENGFVPMIPPVLVRPEVMAGTGFLGAHAEEVYRIEADDLYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + PLR+ + FR EAGS G+DTRG++R HQF K E D+ E Sbjct: 234 YHADEILDLSAGPLRYAGWSSCFRREAGSYGKDTRGVIRVHQFDKVEGFVYCTPADAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L E+L R+++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HQRLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQQTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNS--KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR+++RYRD + TLNG+ + R L+AILEN+ DGSV +P L P+ Sbjct: 354 FQARRLSTRYRDGGDAKGKPQIAATLNGT-LGTTRWLVAILENHQQPDGSVRVPEALVPF 412 Query: 417 MNNLAVIKK 425 + +++ Sbjct: 413 V-GTELLEP 420 >gi|323454091|gb|EGB09961.1| hypothetical protein AURANDRAFT_23294 [Aureococcus anophagefferens] Length = 440 Score = 320 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 123/437 (28%), Positives = 207/437 (47%), Gaps = 18/437 (4%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI +R +PE + + ++R + + +++ DE R L + ++DI+A +N Sbjct: 3 LDISILRAYRGGDPEKVRESQRRRFADVGLVDKVIAEDEAWRKLTQDVDDIKAEKNKKQK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I + + + L + +E +KKL S I N+ ++V + Sbjct: 63 EITTLKKA-KADVPAQMLADLKALDAKRAAVEARVEPQAQKVKKLFSGIGNLVADDVVVS 121 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++ + S + + + H E+ +G + +R +++G R T L + Sbjct: 122 QDEEKDNEVVSRWGECAPT-AAHSHHELLYMIGGYEPERGVRVAGHRAYFFTDVGVMLNQ 180 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPT 231 A+ + I + Y + P ++ + M G Q+ +F + ++ ++LI T Sbjct: 181 AVINYGISF-LRKRAYKVMQPPYMMNKDVMAGVAQLSEFDEALYKVSGGDADSEKYLIAT 239 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT- 290 SE + + E ++ LPLR+ ++ FR EAGS GRDT G+ R HQF K E IT Sbjct: 240 SEQPICAYHKGEWLKEADLPLRYAGISTCFRKEAGSHGRDTWGIFRVHQFEKVEQFCITV 299 Query: 291 -REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+S HE M AEE ++ L Y VV++ +G+L +A K YDLE W Q +RE Sbjct: 300 GDLEESAKMHEEMKDLAEEYVQSLGFPYHVVNIVSGELNNAAIKKYDLEAWFPFQKQFRE 359 Query: 350 ISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 + SCS C ++QSR M R + + K+ H LN + A GR + +LEN G V Sbjct: 360 LVSCSNCTDYQSRAMEIRCGNKKMGEREKKYVHMLNSTLAACGRTICCLLENNQTPTG-V 418 Query: 408 TIPTVLRPYMNNLAVIK 424 +P VL PYM+ L + Sbjct: 419 HVPEVLWPYMDGLTFLP 435 >gi|240047515|ref|YP_002960903.1| seryl-tRNA synthetase [Mycoplasma conjunctivae HRC/581] gi|239985087|emb|CAT05080.1| Seryl-tRNA synthetase [Mycoplasma conjunctivae] Length = 414 Score = 320 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 171/418 (40%), Positives = 245/418 (58%), Gaps = 7/418 (1%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 DI++I N E + L R+ + + + K+ E++ A+RN SAQIGQ Sbjct: 2 DIRFILNNKELVKAKLATRNFDVSRIDNFCQQALLKNQIQKQFEELLAKRNKISAQIGQL 61 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + + LK E +K QL +E++ E+ S +KK I PN+PL+EVP+G N+ Sbjct: 62 TRQKVDATL--LKKEVEDIKIQLANIEQDFLEIESKIKKEILEFPNLPLDEVPVGKDEND 119 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 N++I VG H++ G +DF RA KLSG RF + A L R L Sbjct: 120 NLIIAKVGSPRLFDFPVVPHYDFGVNQDYLDFKRAVKLSGNRFVIYKNLAAKLVRVLINL 179 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNLY 240 MID H GY E+ L+ ++++YGTGQ+PKF++D + WLIPT+EV +TN + Sbjct: 180 MIDTHI-SRGYQEILPNTLILEKSLYGTGQLPKFSEDFYKIENSSHWLIPTAEVPITNYF 238 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 EII+ + +F + S+RSEAGS GRDT+G++R H+F K ELV IT ED E E Sbjct: 239 QDEIIDLAN-AKKFVGYSKSYRSEAGSGGRDTKGIIRLHEFHKVELVKITNAEDGIFEFE 297 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + + A IL+ L++ Y+ V L TGDLGFSA KT DLE W+ +N YRE+SS S CG+FQ Sbjct: 298 QTVEDAAYILELLEIPYQKVVLSTGDLGFSARKTVDLEAWMPSENKYREVSSISYCGDFQ 357 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 ++R RYRD N K + + HT+NGSG+A+ R + +LE Y DG+ +PT+L Y N Sbjct: 358 AQRAKIRYRDQNGKVV-YAHTINGSGLAIDRIVAILLEQYQEKDGTWRVPTILEKYFN 414 >gi|226330729|ref|ZP_03806247.1| hypothetical protein PROPEN_04649 [Proteus penneri ATCC 35198] gi|225201524|gb|EEG83878.1| hypothetical protein PROPEN_04649 [Proteus penneri ATCC 35198] Length = 290 Score = 320 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 152/289 (52%), Positives = 192/289 (66%), Gaps = 7/289 (2%) Query: 142 FEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 +GE +DF A K++G+RF V+ G +A L RA+ QFM++LHT EHGY E+ P LV Sbjct: 1 MTLGELTDGLDFASAVKITGSRFVVMKGQIARLHRAITQFMLNLHTEEHGYQEMYVPYLV 60 Query: 202 RDEAMYGTGQIPKFADDMFCTTD-------GRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 +YGTGQ+PKF++D+F T LIPT+EV +TN+ I+E LPL+ Sbjct: 61 NHATLYGTGQLPKFSEDLFHTKPLEEEAESQYALIPTAEVPVTNMVRDVILEEDDLPLKM 120 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 T P FRSEAGS GRDTRG++R HQF K ELV I E S E + AE++L+ L+ Sbjct: 121 TAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIAHPEKSMEALEELTGHAEKVLQLLN 180 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK 374 L YR V LCTGD+GF + KTYDLEVW+ QN YREISSCS +FQ+RRM +R+R K Sbjct: 181 LPYRKVVLCTGDIGFGSRKTYDLEVWVPAQNTYREISSCSNMWDFQARRMQARFRSKGDK 240 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 + HTLNGSG+AVGR L+AI+ENY ADG + IP VLRPYMN L I Sbjct: 241 KTQLVHTLNGSGLAVGRTLVAIMENYQMADGRIEIPEVLRPYMNGLEYI 289 >gi|320040889|gb|EFW22822.1| seryl-tRNA synthetase [Coccidioides posadasii str. Silveira] Length = 473 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 122/440 (27%), Positives = 213/440 (48%), Gaps = 20/440 (4%) Query: 1 MLDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + + P+ + + ++R + + ++SL E R + I ++ N+ Sbjct: 1 MLDIADLIADRGGDPKKVKESQRRRFASEELVDEVISLYEDARRTRYEASQIGSKINALQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N L + + L++ E E + + I N + VPI Sbjct: 61 KEIG--MKKKNKEDASELLAQKAKLEQDKKAQEDLAVEKEKLRDRKLKTIGNYVHDSVPI 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + ++N +I++ + + + H E+ L D +R K+ G R LTG+ Sbjct: 119 SNNEDDNAIIKTWAPEGAKVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGFCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPFFMLRDYMAKTAQLEQFDEELYKVTESEDKSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E ++ K LP+++ + FR EAGS G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEAGSHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ E+S+ + M++ +EE + L L Y++VS+ +G L +A K +DLE W Q Y Sbjct: 298 ILTKPEESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALNNAASKKWDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++QSR ++ R+ + + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATLCATERALCCILENYQQEDG 417 Query: 406 SVTIPTVLRPYMNNL-AVIK 424 + +P VLR Y+ + Sbjct: 418 -IIVPEVLRKYIPGQPEFLP 436 >gi|281200603|gb|EFA74821.1| hypothetical protein PPL_11854 [Polysphondylium pallidum PN500] Length = 2954 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 123/429 (28%), Positives = 213/429 (49%), Gaps = 11/429 (2%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 + Q+I+ N L KKR+ + I++ ++ R++ ++I+ +R ++N +A + Q Sbjct: 790 NFQYIKDNQVELQENAKKRNTLVDIQSIVAKYDEYRVVKREIDAVRKQKNDVAAAVKQ-- 847 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE- 121 + AL ++ +K++L +E + + L IPN + PIG Sbjct: 848 KSLSKEERQALIDQGKQVKDRLAEMEISHDTLFNELTSEALKIPNNTHPDSPIGPEDKAV 907 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 +L + + ++H E+GE+LGL A+ +G ++ T A LE AL + Sbjct: 908 TVLNVGKIPEFNDGFQPKDHVELGESLGL--LKPASHTTGHKYYYFTRDAAMLEMALSYW 965 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM--FCTTDGRWLIPTSEVSLTNL 239 ++G+T + P +V G P+ + L T+E+ + + Sbjct: 966 AFSTMQLKYGFTPIITPDVVHPALAEACGFQPRSEATQLYWMRDHELCLTATAEIPMAGI 1025 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S+ +++ LPL+ + FR+E G G +G+ R HQF K E+ I+ E S + Sbjct: 1026 HSNSVLDQAELPLKMVGYSHCFRAETG-RGVINKGIYRVHQFSKVEMFVISTPEQSESIL 1084 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + +L E+ L+L +RV+ + T DLG A + YD+EVW+ +N Y EISS S+C ++ Sbjct: 1085 KELLDIQIEMFSSLELPFRVLDMPTEDLGAPAYRKYDIEVWIPSRNGYGEISSASSCTDY 1144 Query: 360 QSRRMNSRYRDPNSKSLK---FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 QS+R+N +Y+ N+ + F HTLN + A+ R ++AILEN DGSV IP +LRP Sbjct: 1145 QSKRLNIKYKHNNNNNTDNQSFAHTLNATACAIPRIILAILENNQQPDGSVIIPKILRPL 1204 Query: 417 MNNLAVIKK 425 M I Sbjct: 1205 MGGKDRILP 1213 >gi|66823277|ref|XP_644993.1| seryl-tRNA synthetase [Dictyostelium discoideum AX4] gi|75009955|sp|Q7KWQ2|SYSC_DICDI RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|60473019|gb|EAL70967.1| seryl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 451 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 132/433 (30%), Positives = 213/433 (49%), Gaps = 16/433 (3%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NP+ + + K R+ + ++ LD+ + ++++ A + Sbjct: 3 LDIVLFRADKGGNPDLIRQSQKVRYANVDAVQEVIDLDKVVKETKYRLDNTNAEYAKLNK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + G D + + L + + L+ E EV L+K + I N+ E VPI Sbjct: 63 SVAMKKKAG--ESADEIIAQAEELNQSIIKLKAEVSEVELLLRKKLRPIGNIVHESVPID 120 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + + N +I++ G+ + H E+ E + D +R T +SG R L G L + Sbjct: 121 NNEDNNQIIKTWGECKT-SEGLLHHHELLEMIDGYDPERGTLVSGHRCYFLKGIGVLLNQ 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSE 233 A+ F + +H ++ G + P + + M T Q+ +F D+++ + ++LI TSE Sbjct: 180 AIINFAL-MHMTKRGSVPLQTPFFMNKDVMAKTAQLEQFDDELYKVTGDNEEKYLIATSE 238 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++ + E IE K LP ++ + FR EAGS GRDT G+ R HQF K E IT E Sbjct: 239 QPISAFHQDEWIEEKDLPKKYVGYSTCFRKEAGSHGRDTWGIFRVHQFEKIEQFCITEPE 298 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E M++ +E+ + L + YRVV++ +G L +A K YDLE W G N YRE+ SC Sbjct: 299 KSWDMMEEMINNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWFPGYNQYRELVSC 358 Query: 354 STCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S C ++QSR + R + + K+ H LN + A R + ILENY G +T+P Sbjct: 359 SNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENYQTE-GGITVPV 417 Query: 412 VLRPYMNNLAVIK 424 LRPY+ I Sbjct: 418 PLRPYL-GKDFIP 429 >gi|164429332|ref|XP_955965.2| seryl-tRNA synthetase [Neurospora crassa OR74A] gi|157073440|gb|EAA26729.2| seryl-tRNA synthetase [Neurospora crassa OR74A] Length = 506 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 123/440 (27%), Positives = 205/440 (46%), Gaps = 21/440 (4%) Query: 10 NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN-- 66 NPE + + +KR + + +++L E +R + A+ N QI N Sbjct: 45 NPEKIRESQRKRFAPVEVVDEVIALWEDHRKTAYSAMQLNAKINEVQKQIAPKKKAYNPY 104 Query: 67 ------LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 V L + + L+++ L E LK + I N+ + VP+ + + Sbjct: 105 PSTTIAKEDVSDLLKQKADLEKEKKDLLDSAAEKEKLLKVKVKTIGNLVHDSVPVSNNED 164 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N + R+ + A H E+ L D +R K+ G R L L +A+ Sbjct: 165 NNTVERTWAPEGVAFEKKDVLSHHEVLRKLDGYDPERGVKVVGHRGYFLKKWGVFLNQAI 224 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR---WLIPTSEVS 235 + ++ SE YT + P L+ + M T Q+ +F ++++ T + +LI TSE Sbjct: 225 INYGLEF-LSEREYTPLQTPQLMLRDQMAKTAQLSQFDEELYKVTGDQADKYLIATSEQP 283 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 ++ +S E +++K LPL++ + FR EAG+ G+D G+ R H+F K E IT E S Sbjct: 284 ISAFHSDEWLQAKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKVEQFCITEPEKS 343 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + E M+S +E + L + YRVV++ +G L +A K DLE W Q ++E+ SCS Sbjct: 344 WEMFEHMISNSEAFYQSLGIPYRVVAIVSGALNNAAAKKLDLEAWFPHQGEFKELVSCSN 403 Query: 356 CGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 C ++QSR + R+ + + H LN + A R + AILEN+ +G V +P L Sbjct: 404 CTDYQSRDLEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAILENFQTPEG-VKVPEPL 462 Query: 414 RPYMNNL-AVIK--KEHILE 430 R Y+ I E + E Sbjct: 463 RKYLPGAPEFIPFAPEPVKE 482 >gi|124028106|ref|YP_001013426.1| seryl-tRNA synthetase [Hyperthermus butylicus DSM 5456] gi|166222733|sp|A2BM70|SYS_HYPBU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|123978800|gb|ABM81081.1| Seryl-tRNA synthetase [Hyperthermus butylicus DSM 5456] Length = 460 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 140/451 (31%), Positives = 228/451 (50%), Gaps = 30/451 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++++R+NP+ L +++KR L+P + +DE+ R L +++++IR R N + QI A Sbjct: 6 LRYLRENPDILKDSMRKRGLDPSVIDEAKRVDEEWRKLKRQVDEIRHRHNVITRQIASA- 64 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + L E L + LEK+ + ++++ +PN+ + VP+G S EN Sbjct: 65 --RDPEERRKLIEEARRLLAEREELEKKLKALEEERERILLSLPNIVHDSVPVGFSDEEN 122 Query: 123 ILIRSVGKKPSA------IHLSREHFEIGEALGLMDFD------------------RATK 158 + IR G+ E + L+D+ +A + Sbjct: 123 VPIRFWGRPRVYRGHLDAFKAQTERWGFKVDYELIDWKPVGHADMLEYVLKLGNTMKAAE 182 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 ++G+RF L + L+ AL + ID T + GY V P ++R + + G + F D Sbjct: 183 VAGSRFYYLFDDIVWLDFALLLYAIDRLT-QKGYRLVLPPYMIRHKILMGVIDMETFKDA 241 Query: 219 MFCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 ++ + +LI T+E L LY +E I LP++ ++P FR EAG+ RD +G+ R Sbjct: 242 IYKVEDEDLYLIATAEHPLAGLYYNEEIMEDELPIKLVGISPCFRKEAGAGNRDLKGIFR 301 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 HQF K E + E+S+ E ++ AEE+ + L L YRVV++ +G+LG A K YDL Sbjct: 302 VHQFHKVEQFVYAKPEESWDILEELIRNAEELFQGLGLPYRVVNVVSGELGAPAAKKYDL 361 Query: 338 EVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 EVW+ Q YRE+ S S ++QS R+N R ++ HTLN + +A R + AIL Sbjct: 362 EVWMPAQGKYREMVSASNTTDWQSYRLNIRLVRKKDMKREYVHTLNSTAIASTRTITAIL 421 Query: 398 ENYLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 EN+ DG+V IP VLR Y+ K+ I Sbjct: 422 ENFQEPDGTVVIPKVLRKYLEIFPKAPKDAI 452 >gi|291296089|ref|YP_003507487.1| seryl-tRNA synthetase [Meiothermus ruber DSM 1279] gi|290471048|gb|ADD28467.1| seryl-tRNA synthetase [Meiothermus ruber DSM 1279] Length = 424 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 155/428 (36%), Positives = 241/428 (56%), Gaps = 10/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++IR+NPE + A++K+ L + + +L LD++ + L + IE I+A RN+N + Sbjct: 1 MLDIKFIRENPEAVRQAIEKKGLTLELDKLLELDQEVQTLKRTIEKIQAERNAN----AK 56 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A A+ + QL LE + + + LK+L+ P +P E P+G + Sbjct: 57 AAARAKPEERAAMIERGKEIGRQLAELEPQLRTLEAQLKQLLYLTPTLPWEGAPVGPDDS 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ R G + + +H + E G DF+RA K+SG+R +L G L E+AL + Sbjct: 117 FNVETRVHGNPRTFLFEPLDHVALMEKNGWGDFERAAKVSGSRSYILKGDLMVYEQALLR 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 F +D + G+T +S P L ++EA+Y GQ P D ++ +L T+EV L L Sbjct: 177 FALDRMI-QAGFTPMSVPSLTKEEALYAHGQFPAARDQVYAVDGGEVYLAGTAEVLLNYL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 ++ EI+ LP + L+P FRSEAGSAGRD RG++R HQF K E + + ++S Sbjct: 236 HAGEILAETELPKTYCALSPCFRSEAGSAGRDVRGLMRVHQFNKVEQYVLCKADLDESNR 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E MLS +E IL+ L+L YRV+ + TGD+G + DLE W+ +N YRE SCS Sbjct: 296 WFETMLSISEGILQALELPYRVIEVSTGDMGLGKYRQVDLETWVPSENRYRETHSCSALL 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR RYRD K + + +TLN + +A R L+ +LEN+ N DG+V +P ++PY Sbjct: 356 DWQARRAGLRYRDERGK-IHYAYTLNNTALATPRILVMLLENHQNEDGTVNVPRAVQPYF 414 Query: 418 NNLAVIKK 425 ++ Sbjct: 415 -GKEKLEP 421 >gi|119872042|ref|YP_930049.1| seryl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] gi|166223276|sp|A1RRX4|SYS_PYRIL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|119673450|gb|ABL87706.1| seryl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] Length = 448 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 135/443 (30%), Positives = 221/443 (49%), Gaps = 24/443 (5%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R NP+++ L R L+ + L LD+K R L K+++++R N S + +A Sbjct: 6 LEALRNNPDYVKKVLTARRLDTSLVDKFLELDKKWRQLKKEVDELRHVYNQLSKEGAKAP 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE- 121 E +V+ + L +L LEKE ++ + L+ PN+ + VPI + Sbjct: 66 PERRREIVE----KARELAAKLENLEKEVEKIEREREDLLWSFPNLIHDSVPICPEGVDS 121 Query: 122 ---------NILIRSVGKKPSAIHLSREHFEIGEAL------GLMDFDRATKLSGARFSV 166 + +VG ++ + IG A G++D +A +++G+RF Sbjct: 122 IPVRYGGVVKVAKDAVGTLKDVEYVIVDKLPIGHADMAEVVLGMVDTLKAGEVAGSRFYY 181 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DG 225 L L L+ AL + +D ++ G+ + P +++ + + F D ++ + Sbjct: 182 LLDDLVWLDFALAMYAMDR-LAQKGFRPIIPPYMLKFDVIKRVLDFDTFRDAIYKIEGED 240 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LI T+E + + LPL F +P FR EAG+ RD +G+ R H F K E Sbjct: 241 LYLIATAEHGIAAYLYKRELVEDELPLLFVGWSPCFRKEAGAGSRDLKGIFRVHIFHKVE 300 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + EDS+ HE + EE++K L L YRVV++C DLG A K YD+EVW Q+ Sbjct: 301 QFVFSLPEDSWRWHEEITKNTEELIKDLGLPYRVVNICAHDLGAPAAKKYDIEVWYPAQS 360 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +YRE++SCS ++QS R+ R +F HTLN +G+A R + AILEN+ DG Sbjct: 361 MYRELASCSNVTDWQSYRLGIRV-TRKGMRREFVHTLNCTGLATTRTITAILENFQREDG 419 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 V IP VLRPY+ + K++I Sbjct: 420 VVEIPKVLRPYLEPIKAAPKDYI 442 >gi|238503390|ref|XP_002382928.1| seryl-tRNA synthetase [Aspergillus flavus NRRL3357] gi|317138770|ref|XP_001817126.2| seryl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40] gi|220690399|gb|EED46748.1| seryl-tRNA synthetase [Aspergillus flavus NRRL3357] Length = 474 Score = 319 bits (817), Expect = 6e-85, Method: Composition-based stats. Identities = 121/440 (27%), Positives = 207/440 (47%), Gaps = 20/440 (4%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI NP + + +KR + IL+L E+ R ++ I ++ N Sbjct: 1 MLDIADFVSDRGGNPNKVKESQRKRFAPESVVDEILTLYEEARRARYEVMQIGSQLNGLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ +L E + L+++ E + + I N + VP+ Sbjct: 61 KEIGKKKKN--KEDASSLLEEKAALEQRKKDAEDLALQKEKQRDSKLRTIGNYVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + ++N+++++ + + H E+ L D +R K+ G R LTG+ Sbjct: 119 SNNEDDNVVVKTWVPENVTVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALINYGLEF-LWGKGYKPNQPPQFMLKDMMAKTAQLEQFDEELYKVTESEDKSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E ++ K LP+++ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ E S+ E M++ +EE K L L Y++V++ +G L +A K YDLE W Q Y Sbjct: 298 VLTKPEQSWEAFEEMMATSEEFYKSLGLPYQIVTIVSGALNNAASKKYDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R + RY + + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCCILENYQKEDG 417 Query: 406 SVTIPTVLRPYMNNL-AVIK 424 + +P LR Y+ + Sbjct: 418 FI-VPEPLRKYIPGAPEFLP 436 >gi|45185142|ref|NP_982859.1| ABL088Cp [Ashbya gossypii ATCC 10895] gi|44980778|gb|AAS50683.1| ABL088Cp [Ashbya gossypii ATCC 10895] Length = 459 Score = 319 bits (817), Expect = 6e-85, Method: Composition-based stats. Identities = 123/447 (27%), Positives = 209/447 (46%), Gaps = 27/447 (6%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + NP+ + + + R+ + + I+S ++ +++++ N Sbjct: 1 MLDITLFIEEKGGNPDLIKKSQQARNAPVEIVDEIISDYKEWVKTRFQLDELNKAFNKVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IGQ N L + + E+ L ++E E +L+ ++ + N+ V + Sbjct: 61 KEIGQKFK--NKEDASELLAQKERMTEEKKQLIEQEQEQDKALRDKVNRVGNIVHPSVVV 118 Query: 116 GTSANENILIRSVGKK----------PSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + + H E+ L D +R K+SG R Sbjct: 119 SNDEANNELVRTWRPEGLSEVGTTASCTGQPAKLSHHEVLLRLDGYDPERGVKISGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 + L +AL + + + GY + AP+++ E M T Q+ +F ++++ D Sbjct: 179 FFRNYGVFLNQALINYGLSF-LAAKGYCPLQAPVMMNKEVMAKTAQLSQFDEELYKVMDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ +S E E LP+R+ + FR EAG+ G+D G+ R H Sbjct: 238 EDEKYLIATSEQPISAYHSGEWFEKPQEQLPIRYVGYSSCFRREAGAHGKDAWGVFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E IT E S+ E + M++ +EE + L + YR+V + +G+L +A K YDLE W Sbjct: 298 FEKIEQFCITEPEKSWEEFDSMIANSEEFYQSLGIPYRIVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + + K+ H LN + A R L +LE Sbjct: 358 FPYQQEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCLLE 417 Query: 399 NYLNADGSVTIPTVLRPYMNNL-AVIK 424 NY DG V +P VLR Y+ I Sbjct: 418 NYQTEDGLV-VPEVLRKYIPGEPEFIP 443 >gi|115438574|ref|XP_001218101.1| seryl-tRNA synthetase [Aspergillus terreus NIH2624] gi|114188916|gb|EAU30616.1| seryl-tRNA synthetase [Aspergillus terreus NIH2624] Length = 473 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 121/434 (27%), Positives = 211/434 (48%), Gaps = 19/434 (4%) Query: 1 MLDI-QWIRQ---NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ +I NP + + +KR + + +++L E R ++ I ++ N+ Sbjct: 1 MLDLADFISDRGGNPNKIKESQRKRFAPEEVVDEVIALYEAARRARYEVTQIGSQLNAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IGQ N L + + L++ ++ + + + I N E VP+ Sbjct: 61 KEIGQKKK--NKEDATELIEKKAALEKSKKEADELALQKEAERDSKVRGIGNYVHESVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + ++N+++++ + + + H E+ L D R K+ G R LTG+ Sbjct: 119 SNTEDDNVIVKTWAPEATTVEKRDCLSHHEVLTRLDGYDPARGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ + GYT P + E M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFKKGYTPNQPPQFMLKEMMAKTAQLEQFDEELYKVTESDDKSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E ++ K LP+++ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDSEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 IT E S+ E M++ +EE + L L Y++V++ +G L +A K YDLE W Q Y Sbjct: 298 VITNPEKSWEAFEEMMATSEEFYQSLGLPYQIVAIVSGALNNAASKKYDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R + RY + + H LN + A R L ILENY +G Sbjct: 358 KELVSCSNCTDYQARALEIRYGIKKQTDAKKTYVHALNATLCATERTLCCILENYQTEEG 417 Query: 406 SVTIPTVLRPYMNN 419 + +P LR Y+ Sbjct: 418 FI-VPEPLRKYIPG 430 >gi|118467339|ref|YP_879487.1| seryl-tRNA synthetase [Mycobacterium avium 104] gi|254773252|ref|ZP_05214768.1| seryl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291] gi|166222745|sp|A0Q999|SYS_MYCA1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|118168626|gb|ABK69523.1| seryl-tRNA synthetase [Mycobacterium avium 104] Length = 425 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 150/429 (34%), Positives = 238/429 (55%), Gaps = 13/429 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++ +R++P+ + + + R +P + +L+ D R I + +RA + S S +G Sbjct: 1 MIDLKLLREDPDAVRRSQQSRGEDPSLVDALLAADAARRAAISTADTLRAEQKSASKSVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A E + L L EQ+ E + E ++ I NV ++ VP G Sbjct: 61 AASPEQRPA----LLARAKELAEQVKAAETAQAEAEAAFTAAHLAISNVVIDGVPAGGED 116 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +L V +P+A+ R+H E+GE+LGL+D R K+SG+RF LTG A L+ L Sbjct: 117 DFAVLD--VVGEPTALENPRDHLELGESLGLIDMARGAKVSGSRFYFLTGKGALLQLGLL 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTN 238 Q + L E+G+ + P+LVR E M GTG + A++++ D +L+ TSEV L Sbjct: 175 QLALRLAV-ENGFVPMIPPVLVRPEVMAGTGFLGAHAEEVYRIEADDLYLVGTSEVPLAG 233 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ EI++ + PLR+ + FR EAGS G+DTRG++R HQF K E D+ E Sbjct: 234 YHADEILDLSAGPLRYAGWSSCFRREAGSYGKDTRGVIRVHQFDKVEGFVYCTPADAEAE 293 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L E+L R+++ YRV+ + GDLG SA + +D E W+ Q YRE++S S C Sbjct: 294 HQRLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQQTYRELTSTSNCTT 353 Query: 359 FQSRRMNSRYRDPNS--KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 FQ+RR+++RYRD + TLNG+ + R L+AILEN+ DGSV +P L P+ Sbjct: 354 FQARRLSTRYRDGGDAKGKPQIAATLNGT-LGTTRWLVAILENHQRPDGSVRVPEALVPF 412 Query: 417 MNNLAVIKK 425 + +++ Sbjct: 413 V-GTELLEP 420 >gi|159039176|ref|YP_001538429.1| seryl-tRNA synthetase [Salinispora arenicola CNS-205] gi|157918011|gb|ABV99438.1| seryl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 427 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 149/434 (34%), Positives = 230/434 (52%), Gaps = 16/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS----EYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD++ IR++ + + AL KR + + + LD++ R LI +I+ R RR + + Sbjct: 1 MLDMELIRKDRDAVASALAKRLDPAEVTRALDELQQLDQQRRSLITEIDGERQRRKAEAR 60 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +A G V A + + QL LE E V + L+ +S +PN+P ++V G Sbjct: 61 AYAEAKRAGREPEVTA----SEAGRRQLAELETELDGVQAQLRLRMSELPNLPADDVAPG 116 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++ +P AI R+H E+ LGL+D +R KL G+ F + TG A LE Sbjct: 117 GKEANRVVKTF--GEPPAIEKVRDHVELSRLLGLVDHERGVKLGGSGFWMYTGLGARLEW 174 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----RWLIPT 231 AL +++D + GY + P L+ D A + GQ PKF DD++ ++L+PT Sbjct: 175 ALVNWLVDQNV-AAGYEFLLPPHLLLDSAGFAAGQFPKFHDDVYHLDRQSAPRGQFLLPT 233 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +E ++ Y EI+++ LPL+ P +R EA + D RG +R HQF K E+ T Sbjct: 234 AETAILGAYQDEILDTAKLPLKVFAYTPCYRREAAGSHSDERGTVRGHQFNKVEIFQFTL 293 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E + E M++ AE +++RL LHY+ L GD + KT D+EVW+ Y+E+S Sbjct: 294 PEQADAALEAMVAHAEGLVERLGLHYQRSLLAAGDASAAMRKTLDIEVWMPSTGKYKEVS 353 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S S G++Q+RR RYR+P K +F HTLNGS +A R AILE + DGSV +P Sbjct: 354 SVSWGGDYQARRAAIRYREPGGKQTRFVHTLNGSALATSRLFPAILEQFQQPDGSVLVPE 413 Query: 412 VLRPYMNNLAVIKK 425 VLR + ++ + Sbjct: 414 VLRDRLGTDRLVPR 427 >gi|18313866|ref|NP_560533.1| seryl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] gi|30173195|sp|Q8ZTP4|SYS_PYRAE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|18161431|gb|AAL64715.1| seryl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] Length = 451 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 129/445 (28%), Positives = 214/445 (48%), Gaps = 25/445 (5%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R +P+ + L R ++ + L LDEK R L K+++++R N S + +A Sbjct: 6 LEALRNSPDVVRKVLTARRMDASLVDKFLELDEKWRRLKKEVDELRHEYNKLSKEGAKAP 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E + D + L +L EKE E + ++++ PN+ E VPI ++ Sbjct: 66 PERRREIAD----KARELAARLERAEKELEETERAREEVLWSFPNLIHESVPICPEGVDS 121 Query: 123 ILIRSVGKKPSAIH-----------------LSREHFEIGEALGLMDFDRATKLSGARFS 165 I +R G + L + D +A +++G+RF Sbjct: 122 IPVRHWGVVKTTKDVVDKLDKGVDYLVVEKAPVGHADMAEVVLKMADTLKAGEVAGSRFY 181 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-D 224 L L L+ AL + +D ++ G+ V P +++ + + F D ++ + Sbjct: 182 YLFDDLVWLDFALAMYALDY-LAQKGFRPVIPPYMLKYDLIRRVLDFDTFKDAIYKIDGE 240 Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 +LI T+E + + + LP + +P FR EAG+ RD +G+ R H F K Sbjct: 241 DLYLIATAEHGIAAYLYKRELLEEELPQLYVGWSPCFRKEAGAGSRDIKGIFRVHIFHKV 300 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E + EDS+ HE + EE+++ L L YRVV++C DLG A K YD+EVW Q Sbjct: 301 EQFVFSLPEDSWKWHEEITKNTEELIRGLGLPYRVVNICAHDLGAPAAKKYDIEVWYPSQ 360 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 +YRE++SCS ++QS R+ R ++ HTLN +G+A R + AILEN+ D Sbjct: 361 GMYRELASCSNVTDWQSYRLGIRV-TRKGMKREYVHTLNCTGLATTRTITAILENFQRED 419 Query: 405 GSVTIPTVLRPYMNNLAVIKKEHIL 429 G+V IP VLR Y+ + K++IL Sbjct: 420 GAVEIPKVLRQYLEPIKAAPKDYIL 444 >gi|259145268|emb|CAY78532.1| Ses1p [Saccharomyces cerevisiae EC1118] Length = 462 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 133/441 (30%), Positives = 203/441 (46%), Gaps = 26/441 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + NPE + + K R+ + + I+S + +++++ + N Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG N L E L +Q L ++E + LKK + + N+ V + Sbjct: 61 KDIGLKFK--NKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSR----------EHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + H EI L D DR K+ G R Sbjct: 119 SNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 + L +AL + + + GY + AP+++ E M T Q+ +F +D++ D Sbjct: 179 FFRNYGVFLNQALINYGLQF-LAAKGYIPLQAPVMMNKELMSKTAQLSEFDEDLYKVIDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ +S E E LP+ + + FR EAGS G+D G+ R H Sbjct: 238 EDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E IT E S+ E E+M+S +EE K L L YR+V + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + + K+ H LN + A R L ILE Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNN 419 NY DG V +P VLR Y+ Sbjct: 418 NYQTEDGLV-VPEVLRKYIPG 437 >gi|302892399|ref|XP_003045081.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256726006|gb|EEU39368.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 471 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 124/439 (28%), Positives = 202/439 (46%), Gaps = 24/439 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI+ + NPE + + ++RH + + +++L + R + I + N Sbjct: 1 MLDIEDFIEERGGNPEKIRESQRRRHAPVELVDEVIALWQDARKTQYGVTQIGTQINGVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG L + L ++ I E+ + LK + N + V + Sbjct: 61 KEIGLKKRA--KEDATELLQQKEELTQKKKIQEELALAKNAELKVKAKMVGNYVHDSVHV 118 Query: 116 GTSANENILIRSVGK--KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N + R+ + + H E+ +G D R KL G R LTG+ Sbjct: 119 SDNEDNNTIERTWKPEGFEESKKAALSHHEVLWRIGGYDPVRGVKLVGHRGYCLTGYGMF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------TDGR 226 L AL + G+T P ++ M T Q+ +F ++++ R Sbjct: 179 LNLALINYATTF-LFNKGFTPNQPPFMLDRAQMAKTAQLSQFDEELYRVSEGPTPSDSDR 237 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LI TSE L+ L++ E I+ LP+++ + FR EAGS GRD G+ R HQF K E Sbjct: 238 YLIATSEQPLSALHADEWIQPTELPIKYCGYSTCFRKEAGSHGRDAWGVFRVHQFEKVEQ 297 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + +DS+ ++M++ +EE K L L Y+VV + TG L +A K YDLE W Q+ Sbjct: 298 FVLCGPDDSWDHFDQMMANSEEFYKSLGLPYQVVGIVTGALNNAAAKKYDLEAWFPFQSE 357 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSK------SLKFTHTLNGSGVAVGRCLIAILENY 400 Y+E+ SCS C ++Q+R + R+ K ++ H LN + A R + ILENY Sbjct: 358 YKELVSCSNCTDYQTRELEIRHGSKKGKQIVGGGKKEYVHALNATLCATERTMCCILENY 417 Query: 401 LNADGSVTIPTVLRPYMNN 419 +G V +P VLR Y+ Sbjct: 418 QTEEGLV-VPEVLRKYIPG 435 >gi|302348069|ref|YP_003815707.1| Seryl-tRNA synthetase [Acidilobus saccharovorans 345-15] gi|302328481|gb|ADL18676.1| Seryl-tRNA synthetase [Acidilobus saccharovorans 345-15] Length = 459 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 139/451 (30%), Positives = 226/451 (50%), Gaps = 31/451 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 + +R NPE L +KR ++ + + + LDE+ R + +I ++R + N SA I +A Sbjct: 6 LNLLRTNPEALREVARKRQIDVKIIDEAVQLDEQWRKVQAEINELRHQHNVISAAIPKAK 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + L + L +L E+ E+ + ++ + +PNV L++VP+G Sbjct: 66 G----EEREKLLAQAKELSRELEDAERRLSELEAKREEALWRLPNVVLDDVPVGGEEATR 121 Query: 123 ILIRS-----------------------VGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + V + + L L D ++A+++ Sbjct: 122 PVRFWGTPRVYHEYLDAFKAQTEAYGFNVPYELIDWKPVGHADMLENVLKLGDTEKASEV 181 Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +G+RF L L L+ AL + ID T GYT V P ++R + + + F D + Sbjct: 182 AGSRFYYLFDDLVWLDFALLLYAIDKLT-SKGYTLVLPPYMLRYKVINSVIDLATFQDAI 240 Query: 220 FCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + D +LI T+E SL +Y +E + LP +F ++P+FR EAG+A +D +G+ R Sbjct: 241 YKIENDDLYLIATAEHSLAAMYYNEELYDDELPKKFVGISPAFRREAGAANKDLKGIFRV 300 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 HQF K E ++ E+S HE ++S AE + + L + YRVV++ +GDLG A K YDLE Sbjct: 301 HQFHKVEQFVFSKPEESQKIHEELISNAEGLFQGLGIPYRVVNIASGDLGACAVKKYDLE 360 Query: 339 VWLAGQNLYREISSCSTCGNFQSRRMNSR-YRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 W+ Q YRE+ S S C ++Q+ R+N R R + ++ HTLN +G+A R + AIL Sbjct: 361 AWMPAQGKYREMVSASNCTDWQAYRLNIRLIRRKGMERGEYVHTLNSTGIASTRTITAIL 420 Query: 398 ENYLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 EN+ DG+V IP VLR Y+ K+ I Sbjct: 421 ENFQEPDGTVIIPKVLRKYLEPFDAAPKDFI 451 >gi|296166962|ref|ZP_06849378.1| serine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897701|gb|EFG77291.1| serine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 434 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 147/428 (34%), Positives = 235/428 (54%), Gaps = 12/428 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++ +R++P+ + + R +P + +L+ D R I + +RA + S S +G Sbjct: 17 IDLKLLREDPDAVRRSQLNRGEDPTLVDALLAADAARRAAISSADALRAEQKSASKSVGA 76 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E + + L EQ+ E E+ + ++ I NV ++ VP G + Sbjct: 77 ASPEERPARL----ARAKELAEQVKAAESEQADAEAAFTAAHMAISNVVIDGVPAGGEDD 132 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +L V +P+ + ++H E+GE+LGL+D R K+SG+RF LTG A L+ L Q Sbjct: 133 YRVLD--VVGEPARLEHPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQ 190 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 + L E+G+ + P+LVR E M GTG + AD+++ D +L+ TSEV L Sbjct: 191 LALRLAV-ENGFIPMIPPVLVRPEVMAGTGFLGAHADEIYRVEADDLYLVGTSEVPLAGY 249 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI++ PLR+ + FR EAGS G+DTRG++R HQF K E + D+ EH Sbjct: 250 HADEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCKPADAEAEH 309 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +R+L E+L R+ + YRV+ + GDLG SA + +D E W+ Q YRE++S S C F Sbjct: 310 QRLLGWQREMLARIGVPYRVIDVAAGDLGSSAARKFDCEAWVPTQGTYRELTSTSNCTTF 369 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 Q+RR+ +RYRD + + TLNG+ + R L+AILEN+ DGSV +P L P++ Sbjct: 370 QARRLATRYRD-DGGKPQTAATLNGT-LGTTRWLVAILENHQQPDGSVRVPEALVPFV-G 426 Query: 420 LAVIKKEH 427 +++ Sbjct: 427 TELLEPAG 434 >gi|326435386|gb|EGD80956.1| hypothetical protein PTSG_01539 [Salpingoeca sp. ATCC 50818] Length = 491 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 127/426 (29%), Positives = 204/426 (47%), Gaps = 13/426 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 L+ + R N E+ ++ R++E + + E+ ++++E +R RN + I + Sbjct: 60 LNFKGWRDNLEYHRANIRNRNVEANVDAAVEAYEQYVAQLQRVEQLRHERNRLTDSI-KK 118 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + S L ++ K L +E + V ++ IPN +VP+G+ Sbjct: 119 MKDKKGSEFQELLRQSKQNKTILQEVESQMPWVEEAMLIEGLAIPNETHPDVPVGSEEQA 178 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 +L V + PS R+H I + L++F ++G+RF L G +A LE AL + Sbjct: 179 TVLQT-VNEAPSFCFEPRDHLAIAQPNNLINFRSGAAVTGSRFYFLHGKVALLEFALVHY 237 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPTSE 233 I+ T + GY V+ P +V+ G P+ L T+E Sbjct: 238 AINFMT-QRGYEPVTVPDIVKTRVAESCGFQPRDDASQIYHLDQQHSVGQAELCLAGTAE 296 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE- 292 + L ++ + L ++ + +FR EAG AG RG+ R HQF K EL I+ Sbjct: 297 IPLAGMWMGHTFDDSELTKKYIAVGHAFRCEAGGAGATNRGLYRVHQFTKAELFVISPGD 356 Query: 293 -EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E S H+ ML ++ L LH++V+ + T DLG A + YD+E W+ G+ + EIS Sbjct: 357 LETSCGLHDEMLQDQIDLFASLGLHFKVLDMPTEDLGAPAYRKYDIEAWMPGRQEFGEIS 416 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S S C ++QSRR+N R R + F HTLNG+ AV R ++AI+E + DG IP Sbjct: 417 STSNCTDYQSRRLNIRSRPTQAAPSSFVHTLNGTACAVPRMIVAIMETFQREDGDFDIPA 476 Query: 412 VLRPYM 417 VL PYM Sbjct: 477 VLEPYM 482 >gi|66361666|ref|XP_627356.1| seryl-tRNA synthetase, cytoplasmic [Cryptosporidium parvum Iowa II] gi|46228735|gb|EAK89605.1| seryl-tRNA synthetase, cytoplasmic [Cryptosporidium parvum Iowa II] gi|323509279|dbj|BAJ77532.1| cgd8_4720 [Cryptosporidium parvum] Length = 454 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 137/447 (30%), Positives = 225/447 (50%), Gaps = 23/447 (5%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +DI IR + + + + R+ + E ++ +D+K R + K+E + NS S Sbjct: 3 IDINRIRVEKGGDYQKIAESEMARYKGLETLEELVKVDQKWREDMFKLEQSKKELNSISK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I Q + + L++++ LK+ LPI+EK+ E KL I NV +VPI Sbjct: 63 EIAQIKKKDPKADCKDLQDKSVQLKKNLPIIEKQALETEEVRDKLWHKIGNVLQPDVPIS 122 Query: 117 TSANENILIRSVGKKPSA----IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 + ++N+++R+ G+ P H EI LG D + +L+G R L + Sbjct: 123 NTEDDNLVLRTWGEIPDIKVDGTPGKLHHNEIMSRLGFYDSVKGAELAGHRGYFLKDYGV 182 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------- 223 + A + GY + P ++ + M ++ F + ++ Sbjct: 183 IMSMA-LSHYAMGFLLKKGYLAIQPPYFMKRDLMGKAAELQDFEETLYHIPSDNSKGEVD 241 Query: 224 -DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 + +LI TSE + ++ + +E K LP+++ ++ FR EAG+ G+DT G+ R HQF Sbjct: 242 SNSLFLIATSEQPIAAMHHNVTLEDKDLPIKYAGISTCFRKEAGAHGKDTWGIFRIHQFE 301 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 K E +T EDS HE M+S +EE + L+L YRV+S+ +G L +A K YDLE W Sbjct: 302 KVEQFCVTLPEDSQKIHEEMISISEEFYQSLELPYRVISIVSGALNDAASKKYDLEAWFP 361 Query: 343 GQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 G N YRE+ SCS C ++QSR + R +R + + H LNG+ A+ R + I+ENY Sbjct: 362 GYNSYRELVSCSNCTDYQSRALECRLGFRKEGEREKHYCHFLNGTLCAIQRTMCCIVENY 421 Query: 401 LNADGSVTIPTVLRPYMNNLAVIKKEH 427 DG + IP VL+PYMN + I ++ Sbjct: 422 QTPDG-LRIPKVLQPYMNGVEFIPFKN 447 >gi|330805610|ref|XP_003290773.1| hypothetical protein DICPUDRAFT_49409 [Dictyostelium purpureum] gi|325079086|gb|EGC32704.1| hypothetical protein DICPUDRAFT_49409 [Dictyostelium purpureum] Length = 443 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 128/437 (29%), Positives = 212/437 (48%), Gaps = 20/437 (4%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NP+ + + K R+ + ++ LD+ + K+ + Sbjct: 3 LDIVAFRADKGGNPDLIRQSQKARYANVDAVQEVIDLDKTVKETNYKLSQANGEYAKLNK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + G D L + L + + L+ + E+ +L+K + I N+ E VPI Sbjct: 63 AVAMKKKAG--ENADELIAQAEALDKDISQLKTDATELELALRKKLKPIGNIVHESVPID 120 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + + N +++ G+ + H E+ E + D +R +++ G R L G L + Sbjct: 121 NNEDNNQIVKQWGECKT-SEGLLHHHELLEMIDGYDPERGSQVGGHRCYFLKGIGVLLNQ 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------TDGRWLI 229 A+ F + T + GYT + P ++ E M T Q+ +F ++++ + ++LI Sbjct: 180 AIINFALTYLT-KKGYTALQTPFFMKKEIMAETAQLEQFDEELYKVVGGAAGEENEKYLI 238 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 TSE ++ + E ++ K LP R+ + FR EAGS+GRDT G+ R HQF K E + Sbjct: 239 ATSEQPISAFHRGEWLDEKELPKRYVGYSTCFRKEAGSSGRDTWGIFRVHQFEKIEQFCV 298 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T E S+ E M+S +E+ + L + YRVV++ +G L +A K YDLE W G N YRE Sbjct: 299 TEPEKSWDMMEEMISNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWFPGYNTYRE 358 Query: 350 ISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 + SCS C ++QSR + R + + K+ H LN + A R + ILENY G + Sbjct: 359 LVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENYQTE-GGI 417 Query: 408 TIPTVLRPYMNNLAVIK 424 T+P LRP++ I Sbjct: 418 TVPEPLRPFL-GKDFIP 433 >gi|254566971|ref|XP_002490596.1| Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase [Pichia pastoris GS115] gi|238030392|emb|CAY68315.1| Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase [Pichia pastoris GS115] gi|328350984|emb|CCA37384.1| seryl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 460 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 130/450 (28%), Positives = 215/450 (47%), Gaps = 31/450 (6%) Query: 1 MLDI-QWIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI Q+I + +PE + + K R + + I+S + + +++++ ++N Sbjct: 1 MLDIVQFIEERGGDPEAIRKSQKARGDSVEIVDEIISEYKDWVKIRFELDELNKQQNKVQ 60 Query: 56 AQIG-QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 +IG + + + + K E KEQL + E+E + N+ E VP Sbjct: 61 KEIGLKFKKKEDPKELLQKKEEIVKAKEQLNLKEQEADRNLRFKVNQ---VGNIVHESVP 117 Query: 115 IGTSANENILIRSVGKKPSAIHLSRE------------HFEIGEALGLMDFDRATKLSGA 162 I + + N L+R + + I H E+ L D +R K+ G Sbjct: 118 ISDNEDNNELVRDWAPEGTNIKEVTNIATATGAPAKLSHHEVLLRLDGYDPERGVKIVGH 177 Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 R L + L +AL + + ++ GY + AP+++ + M T Q+ +F ++++ Sbjct: 178 RGYFLRNYGVFLNQALINYGLSY-LAQKGYLPLQAPVMMNKDVMAKTAQLSQFDEELYKV 236 Query: 223 ---TDGRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 D ++LI TSE ++ +S+E E LP+R+ + FR EAGS G+D G+ R Sbjct: 237 TDGDDEKYLIATSEQPISAYHSNEWFEKPQEQLPIRYAGFSSCFRREAGSHGKDAWGIFR 296 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 H F K E +T + S+ E +RM+ AE + L L YRVV + +G+L +A K YDL Sbjct: 297 VHAFEKIEQFCLTEPDKSWEEFDRMIGAAEGFYQSLGLPYRVVGIVSGELNNAAAKKYDL 356 Query: 338 EVWLAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIA 395 E W Q ++E+ SCS C ++QSR + R + K K+ H LN + A R L Sbjct: 357 EAWFPFQKEFKELVSCSNCTDYQSRNLEIRCGIKSVTQKEKKYVHCLNSTLCATERALCC 416 Query: 396 ILENYLNADGSVTIPTVLRPYMNNL-AVIK 424 +LENY DG + +P VLR Y+ I Sbjct: 417 VLENYQTEDG-LKVPEVLRKYIPGEPEFIP 445 >gi|303319345|ref|XP_003069672.1| seryl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109358|gb|EER27527.1| seryl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 473 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 121/440 (27%), Positives = 213/440 (48%), Gaps = 20/440 (4%) Query: 1 MLDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + + P+ + + ++R + + ++SL E R + I ++ N+ Sbjct: 1 MLDIADLIADRGGDPKKVKESQRRRFASEELVDEVISLYEDARRTRYEASQIGSKINALQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N L + + L++ E E + + I N + VPI Sbjct: 61 KEIG--MKKKNKEDASELLAQKAKLEQDKKAQEDLAVEKEKLRDRKLKTIGNYVHDSVPI 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + ++N +I++ + + + H E+ L D +R K+ G R LTG+ Sbjct: 119 SNNEDDNAIIKTWAPEGAKVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGFCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPFFMLRDYMAKTAQLEQFDEELYKVTESEDKSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E ++ K LP+++ + FR EAGS G+D G+ R HQF K + Sbjct: 238 LIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEAGSHGKDAWGIFRVHQFEKAKQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ E+S+ + M++ +EE + L L Y++VS+ +G L +A K +DLE W Q Y Sbjct: 298 ILTKPEESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALNNAASKKWDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++QSR ++ R+ + + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATLCATERALCCILENYQQEDG 417 Query: 406 SVTIPTVLRPYMNNL-AVIK 424 + +P VLR Y+ + Sbjct: 418 -IIVPEVLRKYIPGQPEFLP 436 >gi|12044855|ref|NP_072665.1| seryl-tRNA synthetase [Mycoplasma genitalium G37] gi|1351174|sp|P47251|SYS_MYCGE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|1045673|gb|AAC71221.1| seryl-tRNA synthetase [Mycoplasma genitalium G37] gi|166078963|gb|ABY79581.1| seryl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 417 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 160/426 (37%), Positives = 243/426 (57%), Gaps = 11/426 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R N + L +R++ Q + D+ R ++++E +++ + Q+ Sbjct: 1 MLDPNKLRNNYDFFKKKLLERNVNEQLLNQFIQTDKLMRKNLQQLELANQKQSLLAKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + L E+ LK+++ L + + + L+ PN+ E VP+G + Sbjct: 61 KQKDNKK------LLAESKELKQKIENLNNAYKDSQNISQDLLLNFPNIAHESVPVGKNE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ + G+KP H E+ E L L+ FD+ATK+SG RF T A L RA+ Sbjct: 115 SANLELLKEGRKPVFDFKPLPHRELCEKLNLVAFDKATKISGTRFVAYTDKAAKLLRAIT 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 MIDL+ + Y E + P+++ + ++ TGQ+PKF DD+F +L PT EV L N Sbjct: 175 NLMIDLN--KSKYQEWNLPVVINELSLRSTGQLPKFKDDVFKLENTRYYLSPTLEVQLIN 232 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+++EI + LP +T +FR EAGSAG+ T+G +R HQF K ELV + E++ E Sbjct: 233 LHANEIFNEEDLPKYYTATGINFRQEAGSAGKQTKGTIRLHQFQKTELVKFCKPENAINE 292 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M+ AE+ILK L L +R + LCTGD+GFSA KTYDLEVW+A N YRE+SSCS+CG+ Sbjct: 293 LEAMVRDAEQILKALKLPFRRLLLCTGDMGFSAEKTYDLEVWMAASNEYREVSSCSSCGD 352 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RY+D N+ + TLNG+ +++ R AILEN+ DG + IP L+ Y++ Sbjct: 353 FQARRAMIRYKDINNGKNSYVATLNGTALSIDRIFAAILENFQTKDGKILIPQALKKYLD 412 Query: 419 NLAVIK 424 IK Sbjct: 413 -FDTIK 417 >gi|67604545|ref|XP_666622.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54657650|gb|EAL36390.1| hypothetical protein Chro.80542 [Cryptosporidium hominis] Length = 454 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 136/447 (30%), Positives = 225/447 (50%), Gaps = 23/447 (5%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +DI IR + + + + R+ + E ++ +D+K R + K+E + NS S Sbjct: 3 IDINRIRVEKGGDYQKIAESEMARYKGLETLEELVKVDQKWREDMFKLEQSKKELNSISK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I Q + + L++++ LK+ LPI+EK+ E KL I N+ +VPI Sbjct: 63 EIAQIKKKDPKADCKDLQDKSVQLKKNLPIIEKKALETEEVRDKLWHKIGNILQPDVPIS 122 Query: 117 TSANENILIRSVGKKPSA----IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 + ++N+++R+ G+ P H EI LG D + +L+G R L + Sbjct: 123 NTEDDNLVLRTWGEIPDIKVDGTPGKLHHNEIMSRLGFYDSVKGAELAGHRGYFLKDYGV 182 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------- 223 + A + GY + P ++ + M ++ F + ++ Sbjct: 183 IMSMA-LSHYAMGFLLKKGYLAIQPPYFMKRDLMGKAAELQDFEETLYHIPSDNSKGEVD 241 Query: 224 -DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 + +LI TSE + ++ + +E K LP+++ ++ FR EAG+ G+DT G+ R HQF Sbjct: 242 SNSLFLIATSEQPIAAMHHNVTLEDKDLPIKYAGISTCFRKEAGAHGKDTWGIFRIHQFE 301 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 K E +T EDS HE M+S +EE + L+L YRV+S+ +G L +A K YDLE W Sbjct: 302 KVEQFCVTLPEDSQKIHEEMISISEEFYQSLELPYRVISIVSGALNDAASKKYDLEAWFP 361 Query: 343 GQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 G N YRE+ SCS C ++QSR + R +R + + H LNG+ A+ R + I+ENY Sbjct: 362 GYNSYRELVSCSNCTDYQSRALECRLGFRKEGEREKHYCHFLNGTLCAIQRTMCCIVENY 421 Query: 401 LNADGSVTIPTVLRPYMNNLAVIKKEH 427 DG + IP VL+PYMN + I ++ Sbjct: 422 QTPDG-LRIPKVLQPYMNGVEFIPFKN 447 >gi|13507744|ref|NP_109693.1| seryl-tRNA synthetase [Mycoplasma pneumoniae M129] gi|2501052|sp|P75107|SYS_MYCPN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|1673809|gb|AAB95797.1| seryl-tRNA synthetase [Mycoplasma pneumoniae M129] Length = 420 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 167/428 (39%), Positives = 245/428 (57%), Gaps = 10/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R N + L +R + E Q E + D+ R L+ +IE ++ + Q+ Sbjct: 1 MLDRNKLRNNLDFFKKKLVERGVSESQFEAYVQADKAMRKLLHQIELANQKQTLLAQQV- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A +G+ L E+ LK++L L E + ++L+ +PN+ E VP+G Sbjct: 60 -AKKKGDP----KLLKESKELKQKLEQLNIAFKEAETLSQELLLNLPNIADESVPVGRDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ + G+KP H+E+ E L L+ FD+ATKL+GARF T A L RA+ Sbjct: 115 TANLELLKEGRKPVFDFTPLPHWELCERLQLVAFDKATKLTGARFVAYTDKAAKLLRAIA 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 MIDL+ ++ Y E + P++V + ++ GTGQ+PKF DD+F +L PT EV L N Sbjct: 175 SLMIDLN--KNKYQEWNVPVIVNETSLTGTGQLPKFKDDVFKLENTRYYLSPTLEVQLAN 232 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+++EI LP +T +FR EAGSAG+ T+G +R HQF K ELV + ++ E Sbjct: 233 LHANEIFTEGELPKYYTATGVNFRQEAGSAGKQTKGTIRLHQFQKVELVKFCKPSEAIHE 292 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE+IL L + +R + LC+GD+GFSA KTYDLEVW+AG N YRE+SSCS+CG+ Sbjct: 293 LEEMTRDAEQILLELKIPFRRLLLCSGDMGFSAQKTYDLEVWMAGCNEYREVSSCSSCGD 352 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RY+D + + TLNG+ +A+ R AILE+Y G V IP L Y++ Sbjct: 353 FQARRAMIRYKDLTTGKNTYVATLNGTALAIDRIFAAILEHYQTKAGEVMIPQALLKYLD 412 Query: 419 NLAVIKKE 426 + K + Sbjct: 413 FDKITKPK 420 >gi|168038680|ref|XP_001771828.1| predicted protein [Physcomitrella patens subsp. patens] gi|162676959|gb|EDQ63436.1| predicted protein [Physcomitrella patens subsp. patens] Length = 451 Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats. Identities = 129/436 (29%), Positives = 213/436 (48%), Gaps = 29/436 (6%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ +PE + + ++R + + ++ LD++ R ++E++R N Sbjct: 1 MLDILLFREERGNDPERIRESQRRRFASVELVDEVIKLDKEWRQRQFEVENMRKEVNKV- 59 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q G + L E K E ++++ + + N+ + VP+ Sbjct: 60 -QDGIKKKKIAKEDPADLLAE------------KTPVECKAAMEAKLRLVGNLVHDSVPV 106 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 + + N ++R G H ++ LG+++ + T ++G R L + L Sbjct: 107 DNNEDNNQVVRKWGTLRE-EAGLFNHVDLVNKLGIVELEAGTDVAGGRGYFLKQYGVMLN 165 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 +AL F + + GYT + P +R E M Q+ +F ++++ T D ++LI T+ Sbjct: 166 QALINFGLSF-LIKRGYTLLQTPFFMRQEVMAECAQLAQFDEELYKVTGEGDDKYLIATA 224 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L L+ ++ K LP+++ + FR EAGS GRDT G+ R HQF K E IT Sbjct: 225 EQPLCALHRGSWMDPKQLPIKYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSP 284 Query: 293 --EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 ++S+ HE ML +E+ ++L L YRVVS+ +G L SA K YDLE W +RE+ Sbjct: 285 NDDESWKMHEEMLKNSEDFYQQLGLPYRVVSIVSGALNDSAAKKYDLEAWFPASKTFREL 344 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C +FQSR + RY + N + + H LN + A R L ILENY +G + Sbjct: 345 VSCSNCTDFQSRNLEIRYGQKKMNDQVKNYCHLLNSTLTATERTLCCILENYQTPEG-LR 403 Query: 409 IPTVLRPYMNNLAVIK 424 +P VL+P+M + Sbjct: 404 VPEVLQPFMLGTDFLP 419 >gi|6320226|ref|NP_010306.1| Ses1p [Saccharomyces cerevisiae S288c] gi|1711650|sp|P07284|SYSC_YEAST RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|642295|emb|CAA87802.1| Ses1p [Saccharomyces cerevisiae] gi|1216231|emb|CAA65216.1| seryl-tRNA synthetase [Saccharomyces cerevisiae] gi|1431454|emb|CAA98844.1| SES1 [Saccharomyces cerevisiae] gi|151942011|gb|EDN60367.1| seryl-tRNA synthetase [Saccharomyces cerevisiae YJM789] gi|190405003|gb|EDV08270.1| serine-tRNA ligase [Saccharomyces cerevisiae RM11-1a] gi|256273249|gb|EEU08192.1| Ses1p [Saccharomyces cerevisiae JAY291] gi|285811045|tpg|DAA11869.1| TPA: Ses1p [Saccharomyces cerevisiae S288c] gi|323334270|gb|EGA75652.1| Ses1p [Saccharomyces cerevisiae AWRI796] gi|323355800|gb|EGA87614.1| Ses1p [Saccharomyces cerevisiae VL3] Length = 462 Score = 316 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 132/441 (29%), Positives = 203/441 (46%), Gaps = 26/441 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + NPE + + K R+ + + I+S + +++++ + N Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG N L E L +Q L ++E + LKK + + N+ V + Sbjct: 61 KDIGLKFK--NKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSR----------EHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + H EI L D DR K+ G R Sbjct: 119 SNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 + L +AL + + + GY + AP+++ E M T Q+ +F ++++ D Sbjct: 179 FFRNYGVFLNQALINYGLQF-LAAKGYIPLQAPVMMNKELMSKTAQLSEFDEELYKVIDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ +S E E LP+ + + FR EAGS G+D G+ R H Sbjct: 238 EDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E IT E S+ E E+M+S +EE K L L YR+V + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + + K+ H LN + A R L ILE Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNN 419 NY DG V +P VLR Y+ Sbjct: 418 NYQTEDGLV-VPEVLRKYIPG 437 >gi|297566243|ref|YP_003685215.1| seryl-tRNA synthetase [Meiothermus silvanus DSM 9946] gi|296850692|gb|ADH63707.1| seryl-tRNA synthetase [Meiothermus silvanus DSM 9946] Length = 423 Score = 316 bits (809), Expect = 5e-84, Method: Composition-based stats. Identities = 148/429 (34%), Positives = 239/429 (55%), Gaps = 10/429 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++IR+NP+ + A++++ + +L LD + L ++ E ++A RN+N + Sbjct: 1 MLDIKFIRENPDIVRKAIQEKGSPLDLDELLLLDRQILELRRRTEALQAERNAN----AK 56 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L + + +L LE + + + LK+L+ P +P E P+G + Sbjct: 57 AAGKASPEERALLIEKGKQIGAELAELEPQLRALEAKLKELLYLTPTLPWEGAPVGPDDS 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++ R G + + +H E+ G + +R K+SG+R L G L E+AL + Sbjct: 117 FNVVTRVHGTPRTFLFEPLDHLELINRNGWGELERIAKVSGSRSYALKGDLMRYEQALLR 176 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 F +D + G+T +S P R+EA Y GQ PK +D++ + +L TSEV L L Sbjct: 177 FALD-QLVDAGFTPISVPSYAREEAFYAHGQFPKAREDVYKVEGEDMYLAGTSEVLLNYL 235 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV--SITREEDSFT 297 ++ EI+ LP + ++ FRSEAGSAG+D RG++R HQF K E I E+S Sbjct: 236 HAGEILSEGELPKAYAGISACFRSEAGSAGKDVRGLMRVHQFNKVEQYVLCIADVEESNR 295 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 ERML+ +E+IL+ L+L YRVV + TGD+G + DLE W+ + YRE SCS Sbjct: 296 WFERMLANSEKILQALELPYRVVEVSTGDMGLGKYRQVDLETWVPSEGRYRETHSCSALL 355 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR RYRD K +++ +TLN + +A R L+ +LEN+ N DG+VT+P ++PY Sbjct: 356 DWQARRAGLRYRDQAGK-VRYAYTLNNTALATPRILVMLLENHQNQDGTVTVPKAVQPYF 414 Query: 418 NNLAVIKKE 426 A ++ Sbjct: 415 -GKARLEPT 422 >gi|262196822|ref|YP_003268031.1| seryl-tRNA synthetase [Haliangium ochraceum DSM 14365] gi|262080169|gb|ACY16138.1| seryl-tRNA synthetase [Haliangium ochraceum DSM 14365] Length = 413 Score = 316 bits (809), Expect = 5e-84, Method: Composition-based stats. Identities = 139/428 (32%), Positives = 216/428 (50%), Gaps = 17/428 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI++I QNP+ + K R + + ILS D++ R ++++ E +R S + Q Q Sbjct: 1 MLDIKFITQNPDAVRETCKTRGYDVDVDAILSADQERREVLRRYEAVRQESKSLAKQWKQ 60 Query: 61 AI-AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A+ + LK E + L QL +E+ + IS +PN E VP+G Sbjct: 61 AEGADERRARAQQLKAEEAELAGQLRDMEEALS-------EKISWLPNFLDERVPVGGEE 113 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ + + R H E+G L L+D R + ARF L + AL Sbjct: 114 ANIVVRSVGEQPT--LEAPRSHEELGAGLDLIDIPRGVNAAKARFYCLKNAAVKMRYALI 171 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSLTN 238 + + H G+ V P L R+ ++ +G +P A D+ + LI TSE ++ Sbjct: 172 RMFTE-HAESQGFQLVCPPFLARNRTLFASGYLPFAAKDNYKLENEDLSLIGTSEQAILG 230 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ E++ LPL + + FR+EAGS GRDT G+LR HQF+K E + ++S Sbjct: 231 MHLDEMLSE--LPLLYLGDSMCFRTEAGSYGRDTAGILRVHQFYKLEQLVYCHPDESDKW 288 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ L E +++ L++ Y+VV +GD+G YD E W QN YRE++S + + Sbjct: 289 HQACLENEEWLMQELEVPYQVVLTASGDMGAPGHIKYDTEAWFPSQNKYREMTSNTNITD 348 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +Q+RR N RY+ K + HT++ +G R ++AILENY ADGSV IP L PYMN Sbjct: 349 YQTRRGNIRYKI--GKEKGYPHTISATGF-SDRLILAILENYQQADGSVRIPEKLVPYMN 405 Query: 419 NLAVIKKE 426 I + Sbjct: 406 GQTSIVAK 413 >gi|258571451|ref|XP_002544529.1| seryl-tRNA synthetase [Uncinocarpus reesii 1704] gi|237904799|gb|EEP79200.1| seryl-tRNA synthetase [Uncinocarpus reesii 1704] Length = 472 Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats. Identities = 123/440 (27%), Positives = 209/440 (47%), Gaps = 20/440 (4%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + NP+ + + ++R + ++ L E R I ++ N Sbjct: 1 MLDIADLVADRGGNPKRVKESQRRRFASEDLVDEVIGLYEDARRTRYDASQIGSKINILQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N L + L++ E E + + I N + VPI Sbjct: 61 KEIG--MKKKNKEDASELLAQKLKLEQDKKAQEDLALEKEKLRDRKLKTIGNYVHDSVPI 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + ++N +I++ + + + H E+ L D +R K+ G R LTG+ Sbjct: 119 SNNEDDNAIIKTWAPEGTKVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGFCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ + GY P + E M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFQKGYKPNQPPFFMLREYMAKTAQLEQFDEELYKVTESEDKSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E ++ K LP+++ + FR EAGS G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCFRKEAGSHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ EDS+ + M++ +EE + L L Y+++S+ +G L +A K +DLE W Q Y Sbjct: 298 VLTKPEDSWKAFDDMIATSEEFYQSLGLPYQIISIVSGALNNAASKKWDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++QSR ++ RY + + H LN + A R L +LENY DG Sbjct: 358 KELVSCSNCTDYQSRELDIRYGPKKTTDTKKAYVHALNATLCATERALCCVLENYQQEDG 417 Query: 406 SVTIPTVLRPYMNNL-AVIK 424 + +P VLR Y+ + Sbjct: 418 -IIVPEVLRKYIPGQPEFLP 436 >gi|323338341|gb|EGA79569.1| Ses1p [Saccharomyces cerevisiae Vin13] Length = 462 Score = 315 bits (808), Expect = 7e-84, Method: Composition-based stats. Identities = 132/441 (29%), Positives = 202/441 (45%), Gaps = 26/441 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + NPE + + K R+ + + I+S + +++++ + N Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG N L E L +Q L ++E + LKK + + N+ V + Sbjct: 61 KDIGLKFK--NKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSR----------EHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + H EI L D DR K+ G R Sbjct: 119 SNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 + L +AL + + + GY + AP+++ E M T Q+ +F + ++ D Sbjct: 179 FFRNYGVFLNQALINYGLQF-LAAKGYIPLQAPVMMNKELMSKTAQLSEFDEXLYKVIDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ +S E E LP+ + + FR EAGS G+D G+ R H Sbjct: 238 EDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E IT E S+ E E+M+S +EE K L L YR+V + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + + K+ H LN + A R L ILE Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNN 419 NY DG V +P VLR Y+ Sbjct: 418 NYQTEDGLV-VPEVLRKYIPG 437 >gi|294852237|ref|ZP_06792910.1| seryl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|294820826|gb|EFG37825.1| seryl-tRNA synthetase [Brucella sp. NVSL 07-0026] Length = 352 Score = 315 bits (808), Expect = 7e-84, Method: Composition-based stats. Identities = 211/352 (59%), Positives = 266/352 (75%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR P S +++LDEK R + K++ + RRN+ S +IG+ Sbjct: 1 MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+A ++ + LK E LK+ L E++E + L +S IPN+PL++VP+G + Sbjct: 61 AMAAKDMGTAEKLKAEVGELKDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDES 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ +R +G + +EHFE+GEALG MDF+RA KL+GARF+VL G LA LERALGQ Sbjct: 121 DNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLAGARFTVLKGPLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+DLHT+EHGYTEV PL+VRDEA+YGTGQ+PKF++D+F TTDGRWLIPT+EV LTNL Sbjct: 181 FMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + EI++ K LPLRFT L P FRSEAGSAGRDTRGMLRQHQF K E+VSIT E S EHE Sbjct: 241 AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHE 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 RM +CAEE+LKRL L +R V LCTGD+GF A +TYD+EVWL GQN YREISS Sbjct: 301 RMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQRTYDIEVWLPGQNTYREISS 352 >gi|146163080|ref|XP_001010732.2| seryl-tRNA synthetase family protein [Tetrahymena thermophila] gi|146146175|gb|EAR90487.2| seryl-tRNA synthetase family protein [Tetrahymena thermophila SB210] Length = 469 Score = 315 bits (808), Expect = 7e-84, Method: Composition-based stats. Identities = 137/452 (30%), Positives = 215/452 (47%), Gaps = 37/452 (8%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R+ +PE + + ++R+ + + + +++LDE+ R E R Sbjct: 3 LDINDFRKEKGGDPEKIKESQRRRYAKVELVDEVVALDEEWRKSQYNYEQARKELRIVQT 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 IG+ + + L E + ++E++ LE E E L+ + I N+ + V + Sbjct: 63 AIGERKKKDKTDACEDLLAEKAKIEEKIKALEVESSEKKEKLEVTLKKIGNIVHDSVVVH 122 Query: 117 TSANENILIRSVGKKPSAIHLSRE------HFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + N ++R+ G + E H +I L D R K++G R L + Sbjct: 123 NNEDFNGVVRTWGDDIKRVIKIDETPGAAHHHQILYMLDGFDQKRGQKIAGHRGYFLKNY 182 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------- 223 L +AL F + GY + P ++ + M T Q+ F + ++ Sbjct: 183 GVLLVQALCTFGQQF-LMKKGYCPMYTPFFMKKDVMGETCQLSDFDEQLYKVDSTSVMHA 241 Query: 224 ---------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 ++LI TSE ++ +S E I+SK LPLR+ L+ FR EAG+AGR+T G Sbjct: 242 EEQKTLNEDKEKYLIATSEQPISAFHSGEWIDSKELPLRYAGLSTCFRKEAGAAGRETWG 301 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R HQF K E + + EDS+ E ERM+ +EE ++ L L YRVV++ +G L +A K Sbjct: 302 VYRVHQFEKVEQFVLCKPEDSWDELERMIKISEEFMQELGLPYRVVNIVSGALNDAAAKK 361 Query: 335 YDLEVWLAGQNLYREISSCSTCGNFQSRRMNS--------RYRDPNSKSLKFTHTLNGSG 386 YDLE W G Y+E+ SCS C +FQSR +N + KF H LNG+ Sbjct: 362 YDLEAWFPGYGQYKELVSCSNCTDFQSRGLNVTTGEVIPGKKDGDKGNEKKFVHMLNGTL 421 Query: 387 VAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 A R L ILENY DG V +P L P++ Sbjct: 422 CAAQRTLTCILENYQEKDG-VRVPKCLVPFVG 452 >gi|169862181|ref|XP_001837721.1| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130] gi|116501170|gb|EAU84065.1| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130] Length = 453 Score = 315 bits (807), Expect = 8e-84, Method: Composition-based stats. Identities = 129/440 (29%), Positives = 212/440 (48%), Gaps = 21/440 (4%) Query: 2 LDIQWIRQNP----EHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI N E + + +KR L + + ++ + + +I +R + N Sbjct: 3 LDILHFIDNKGGNAEEIRESQRKRGLSVELVDEVIQMYTDWVKMDFEINQLRKKVNDVQK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 QI D L E ++ Q+ +KE + + +++ + N+ + VP+ Sbjct: 63 QISAKKKA--KENADELVAEKKSIDAQVETKKKEAKDFEALMRQKACQVGNIVGKNVPVS 120 Query: 117 TSANENILIRSVGK-----KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 + ++N+ I++ +P+ H E+ L MD DR K++G R LT Sbjct: 121 LTEDDNVTIKTWDPTGNLEEPAPRPGILAHHEVLLRLDAMDLDRGAKVAGHRGYYLTNDG 180 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWL 228 L +AL + +D + GY ++ P + + M T Q+ +F ++++ D ++L Sbjct: 181 VDLNQALISYGLDF-LRKKGYKKIQPPFFMNKDQMAKTAQLDQFDEELYKVIASEDEKYL 239 Query: 229 IPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 I TSE ++ +S E E LP+++ + FR EAGSAGRD G+ R HQF K E Sbjct: 240 IATSEQPISAFHSDEWFESPETQLPIKYAGYSTCFRKEAGSAGRDMWGIFRVHQFEKVEQ 299 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 IT E S+ + ML+ +EE + L L YRVV++ +G L +A + YDLE + Q Sbjct: 300 FCITDPEKSWEMLDHMLNNSEEFYQSLGLRYRVVAIVSGALNLAAAQKYDLEAYFPFQRA 359 Query: 347 YREISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 Y+E+ SCS C ++QSRR+ R R + + H LNG+ A R L ++ENY + Sbjct: 360 YKELVSCSNCTDYQSRRLEIRCGLRTKDQTRKVYVHMLNGTLCATERALCCLVENYQTPE 419 Query: 405 GSVTIPTVLRPYMNNLAVIK 424 G V IP LRPYM + Sbjct: 420 GLV-IPEPLRPYMQGRDFLP 438 >gi|317506080|ref|ZP_07963907.1| seryl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] gi|316255624|gb|EFV14867.1| seryl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] Length = 422 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 172/433 (39%), Positives = 249/433 (57%), Gaps = 19/433 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D+ + PE L +R + + +L ++ + L ++ +++R + Sbjct: 1 MHDLDVLLT-PEA-AAKLARRGYQLDITGLGALRDQRKSLRRQADELRTEVRALGK---- 54 Query: 61 AIAEGNLSLVDALKNE-TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 G ++ E +KEQ+ E E + + L++ + IPN+P + P G Sbjct: 55 ---AGKDAVDKQAHAEHARAVKEQVRQAEAELDALEARLREELLGIPNLPSDAAPEGLHE 111 Query: 120 NENILIRSVGKKPSAI-----HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 ++ ++R VG+ P ++H +GE LG++D RATKLSG RFSVL G A L Sbjct: 112 SDYQVVRVVGEPPVFDPADYPDGPKDHVTLGEKLGVLDLGRATKLSGPRFSVLKGLGARL 171 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--TDGRWLIPTS 232 ERAL F +DLHT E GY E S PL+V E + G+GQ+PKF D+F + R+LIPT+ Sbjct: 172 ERALATFFLDLHTKEQGYEEFSVPLIVTAETLTGSGQLPKFEGDLFRVSGEEARYLIPTA 231 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV L N YS E + + LPL + + FRSEAGS G+DTRG+LRQHQF K ELV + Sbjct: 232 EVPLVNYYSGEFLSADQLPLAVASHSNCFRSEAGSYGKDTRGILRQHQFSKVELVRVVLP 291 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E++ + E ML AE LK L LHYRV+ L GDLGF+A +T+D+E W+ Q LYREISS Sbjct: 292 EEAAAQQELMLGHAERCLKELGLHYRVIDLPAGDLGFTAERTFDIEAWIPSQGLYREISS 351 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S+C +FQSRR R + + + + + TLNGS + +GR +IAILE + DGSV +P Sbjct: 352 VSSCADFQSRRNGLRVKGKDGERI-WPATLNGSALPIGRTIIAILEQFQQPDGSVIVPEA 410 Query: 413 LRPYMNNLAVIKK 425 LR ++ V++ Sbjct: 411 LRDFV-GADVLRP 422 >gi|254577065|ref|XP_002494519.1| ZYRO0A03410p [Zygosaccharomyces rouxii] gi|238937408|emb|CAR25586.1| ZYRO0A03410p [Zygosaccharomyces rouxii] Length = 459 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 126/441 (28%), Positives = 206/441 (46%), Gaps = 26/441 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ + NPE + + K R + + I++ + +++++ + N Sbjct: 1 MLDVNQFIEEKGGNPELIRKSQKARGASVEIVDEIIADYKNWVKTRFELDELNKQLNKLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG N L E L + L ++E + + LK ++ + N+ V + Sbjct: 61 KDIGLKFK--NKEDASGLLAEKDKLTNEKKELTEKEQKEDNDLKVKVNVVGNIVHPSVVV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSR----------EHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ G K H E+ L D +R K+SG R Sbjct: 119 SNDEENNELVRTWGPKDLKEVGPIAAATGKPAKLSHHEVLLRLDGYDPERGVKISGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 + L +AL + + + GYT + P+++ E M T Q+ +F ++++ D Sbjct: 179 FFRNNGVFLNQALINYGLSF-LATKGYTPLQPPVMMNKEVMGKTAQLSQFDEELYKVMDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ +S E E LP+R+ + FR EAG+ G+D G+ R H Sbjct: 238 DDEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYAGYSSCFRREAGAHGKDAWGIFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E S+ E +RM+S +EE + L+L YRVV + +G+L +A K +DLE W Sbjct: 298 FEKIEQFCLTEPEKSWEEFDRMISLSEEFYQGLNLPYRVVGIVSGELNNAAAKKFDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + + K+ H LN + A R L +LE Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCVLE 417 Query: 399 NYLNADGSVTIPTVLRPYMNN 419 NY DG V +P VLR Y+ Sbjct: 418 NYQTEDGLV-VPEVLRKYIPG 437 >gi|227827797|ref|YP_002829577.1| seryl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|259512027|sp|C3MW57|SYS_SULIM RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|227459593|gb|ACP38279.1| seryl-tRNA synthetase [Sulfolobus islandicus M.14.25] Length = 457 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 143/449 (31%), Positives = 231/449 (51%), Gaps = 29/449 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++++R+NPE L LK+R ++ + + LD+K R +++++E +R + N S+QI + Sbjct: 6 LEFLRKNPEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIPKLS 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E ++ KN L+++ EKE ++ +L+S +PN+ ++VP G + N Sbjct: 66 GEERKKKIEESKNLLKILEDK----EKELEKIEVERDRLLSSLPNLVADDVPNGPDDSYN 121 Query: 123 ILIRSVGKKPSAIHLSREH-------------FEIGEALGLMDFDRATKLSGA------- 162 I I+ GK E + + L Sbjct: 122 IPIKFWGKFKVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIA 181 Query: 163 --RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 RF L + L+ AL F ID T + GYT V P ++R E + + F D ++ Sbjct: 182 GSRFYYLFNDIVWLDFALLLFAIDYITQQ-GYTLVLPPYMLRGEVIQSVIDLDTFKDAIY 240 Query: 221 CT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI T+E S+ ++ E IE LPL+F ++P+FR EAG+A +D +G+ R H Sbjct: 241 KIENEDLYLIATAEHSVAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + EDS+ H +++ AE I ++L+L YR+V++ +GDLG A K +DLEV Sbjct: 301 QFHKVEQFIFSTPEDSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEV 360 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q +RE+ SCS C ++Q+ RM RY D + + HTLN + +A R + AILEN Sbjct: 361 WMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAILEN 420 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 Y DG V +P VLR Y+ K++I Sbjct: 421 YQREDGVVEVPKVLRKYLEIFPKAPKDYI 449 >gi|229579320|ref|YP_002837718.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|259516183|sp|C3NEQ7|SYS_SULIY RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|228010034|gb|ACP45796.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] Length = 457 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 143/449 (31%), Positives = 231/449 (51%), Gaps = 29/449 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++++R+NPE L LK+R ++ + + LD+K R +++++E +R + N S+QI + Sbjct: 6 LEFLRKNPEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIPKLS 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E ++ KN L+++ EKE ++ +L+S +PN+ ++VP G + N Sbjct: 66 GEERKKKIEESKNLLKILEDK----EKELEKIEVERDRLLSTLPNLVADDVPNGPDDSYN 121 Query: 123 ILIRSVGKKPSAIHLSREH-------------FEIGEALGLMDFDRATKLSGA------- 162 I I+ GK E + + L Sbjct: 122 IPIKFWGKFKVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIA 181 Query: 163 --RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 RF L + L+ AL F ID T + GYT V P ++R E + + F D ++ Sbjct: 182 GSRFYYLFNDIVWLDFALLLFAIDYITQQ-GYTLVLPPYMLRGEVIQSVIDLDTFKDAIY 240 Query: 221 CT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI T+E S+ ++ E IE LPL+F ++P+FR EAG+A +D +G+ R H Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + EDS+ H +++ AE I ++L+L YR+V++ +GDLG A K +DLEV Sbjct: 301 QFHKVEQFIFSTPEDSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEV 360 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q +RE+ SCS C ++Q+ RM RY D + + HTLN + +A R + AILEN Sbjct: 361 WMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAILEN 420 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 Y DG V +P VLR Y+ K++I Sbjct: 421 YQREDGVVEVPKVLRKYLEIFPKAPKDYI 449 >gi|323474865|gb|ADX85471.1| seryl-tRNA synthetase [Sulfolobus islandicus REY15A] gi|323477606|gb|ADX82844.1| seryl-tRNA synthetase [Sulfolobus islandicus HVE10/4] Length = 457 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 144/449 (32%), Positives = 235/449 (52%), Gaps = 29/449 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++++R+NPE L LK+R ++ + + LD+K R +++++E +R + N S+QI + Sbjct: 6 LEFLRKNPEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIPKLS 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E ++ KN L+++ EKE ++ +L+S +PN+ ++VP G + N Sbjct: 66 GEERKKKIEESKNLLKILEDK----EKELEKIEVERDRLLSSLPNLVADDVPNGPDDSYN 121 Query: 123 ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK----------------------LS 160 I I+ GK E + + K ++ Sbjct: 122 IPIKFWGKFKVYEGDVEEFLRQTKDANVNYEITKWKPKGHAEMLEDVLHLGNTLKAAEIA 181 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G+RF L + L+ AL F ID T + GYT V P ++R E + + F D ++ Sbjct: 182 GSRFYYLFNDIVWLDFALLLFAIDYITQQ-GYTLVLPPYMLRGEVIQSVIDLDTFKDAIY 240 Query: 221 CT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI T+E S+ ++ E IE LPL+F ++P+FR EAG+A +D +G+ R H Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + EDS+ H +++ AE I ++L+L YR+V++ +GDLG A K +DLEV Sbjct: 301 QFHKVEQFIFSTPEDSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEV 360 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q +RE+ SCS C ++Q+ RM RY D + + HTLN + +A R + AILEN Sbjct: 361 WMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAILEN 420 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 Y DG V +P VLR Y+ K++I Sbjct: 421 YQREDGVVEVPKVLRKYLEIFPKAPKDYI 449 >gi|327311812|ref|YP_004338709.1| seryl-tRNA synthetase [Thermoproteus uzoniensis 768-20] gi|326948291|gb|AEA13397.1| seryl-tRNA synthetase [Thermoproteus uzoniensis 768-20] Length = 453 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 125/448 (27%), Positives = 221/448 (49%), Gaps = 28/448 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R +P+ + L R ++ + L LD K R L ++I+++R + N S + +A Sbjct: 6 LEALRNSPDVVRKTLVARRMDVTLVDRFLDLDSKWRELKREIDELRHQHNVLSREASKAP 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + ++ + + L E++ LE + V ++L+ PN+ E VP+ ++ Sbjct: 66 PQDRKTIAE----KAKELIEKIKGLEDQLKAVEMERERLLFSFPNLIHESVPVCPEGVDS 121 Query: 123 ILIRSVGKKPSAIHL--------SREHFEIGEAL------------GLMDFDRATKLSGA 162 I +R G A R + + + ++D +A +++G+ Sbjct: 122 IPVRYWGTIKVAREDLEKVLRLDPRPEYVVVDKAPVGHADEAENVLKMVDTLKAGEVAGS 181 Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC- 221 RF + L L+ AL + ++ H + G+ + P +++ + + + F D ++ Sbjct: 182 RFYYMLDDLVWLDFALSLYALE-HLTSKGFRPIVPPYMLKYDVIRRVIDLDTFKDAIYKL 240 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + +LI T+E + + + LP + +P FR EAG+ RD +G+ R H F Sbjct: 241 ENEDLYLIATAEHGIAAYLYGRDLLEEELPQLYVGWSPCFRREAGAGSRDIKGIFRVHIF 300 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E + E+S+T HE + EE+++ L L YRVV++C DLG A K YD+EVW Sbjct: 301 HKVEQFVFSLAEESWTWHEEITKNTEELMQGLGLPYRVVNICAHDLGAPAAKKYDVEVWY 360 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 Q YRE++SCS ++QS R+ R ++ HTLN +G+A R + AILENY Sbjct: 361 PAQGTYRELASCSNVTDWQSYRLGIRV-TRRGMKREYVHTLNCTGLATTRTITAILENYQ 419 Query: 402 NADGSVTIPTVLRPYMNNLAVIKKEHIL 429 DG+V IP VLR Y+ +A K++I+ Sbjct: 420 REDGAVEIPKVLRKYLEPIATAPKDYIV 447 >gi|50555007|ref|XP_504912.1| YALI0F02629p [Yarrowia lipolytica] gi|49650782|emb|CAG77717.1| YALI0F02629p [Yarrowia lipolytica] Length = 453 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 136/439 (30%), Positives = 219/439 (49%), Gaps = 19/439 (4%) Query: 1 MLDI-QWIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI Q++ + NPE + ++ K R + + I++ + ++++ +N Sbjct: 1 MLDIIQFLEEKGGNPEAIRVSQKARGDPVEIVDEIIADYKAWTKTRFDLDELNKEQNKIQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG L E + + L K+E E S+L+ ++ + N+ E V + Sbjct: 61 KAIGLKFKA--KEDASELLKEKDNVVAKKAELTKQEQEQDSALRAKVNTVGNLVHESVVV 118 Query: 116 GTSANENILIRSVGK--KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N +IR+ A+ H E+ L D +R TK+ G R L + Sbjct: 119 SDNEDNNAIIRTFANDGFDPAVKGKLSHHEVLTRLDGYDPERGTKIVGHRGYFLKSYGVF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR---WLIP 230 L +AL + +D T + GY + AP+++ + M T Q+ +F ++++ DG+ +LI Sbjct: 179 LNQALINYGLDFLT-KRGYVPLQAPMMMNKDVMARTAQLSQFDEELYKVMDGQDEKYLIA 237 Query: 231 TSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 TSE ++ +++E E + LP R+ + FR EAGS G+D G+ R HQF K E Sbjct: 238 TSEQPISAYHANEWFERPEEQLPRRYAGYSTCFRREAGSHGKDAWGIFRVHQFEKIEQFC 297 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 IT E S+ E +RM+ +EE K L L YRVVS+ +G+L +A K YDLE W Q Y+ Sbjct: 298 ITDPEKSWEEFDRMIDASEEFYKSLGLPYRVVSIVSGELNNAAAKKYDLEAWFPFQQEYK 357 Query: 349 EISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 E+ SCS C ++QSR + R + N + K+ H LN + A R L ILENY DG Sbjct: 358 ELVSCSNCTDYQSRNLEIRCGIKKQNEREKKYVHCLNSTLCATERALCCILENYQTDDG- 416 Query: 407 VTIPTVLRPYMNNL-AVIK 424 + +P VLR ++ I Sbjct: 417 LRVPEVLRRFIPGEPEFIP 435 >gi|227830507|ref|YP_002832287.1| seryl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|229581920|ref|YP_002840319.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|229585068|ref|YP_002843570.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|238619970|ref|YP_002914796.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|284998002|ref|YP_003419769.1| seryl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] gi|259511682|sp|C3N6A0|SYS_SULIA RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|259511683|sp|C4KHR4|SYS_SULIK RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|259511684|sp|C3MQH9|SYS_SULIL RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|259516136|sp|C3NGY7|SYS_SULIN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|227456955|gb|ACP35642.1| seryl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|228012636|gb|ACP48397.1| seryl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|228020118|gb|ACP55525.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|238381040|gb|ACR42128.1| seryl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|284445897|gb|ADB87399.1| seryl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] Length = 457 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 143/449 (31%), Positives = 231/449 (51%), Gaps = 29/449 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++++R+NPE L LK+R ++ + + LD+K R +++++E +R + N S+QI + Sbjct: 6 LEFLRKNPEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIPKLS 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E ++ KN L+++ EKE ++ +L+S +PN+ ++VP G + N Sbjct: 66 GEERKKKIEESKNLLKILEDK----EKELEKIEVERDRLLSSLPNLVADDVPNGPDDSYN 121 Query: 123 ILIRSVGKKPSAIHLSREH-------------FEIGEALGLMDFDRATKLSGA------- 162 I I+ GK E + + L Sbjct: 122 IPIKFWGKFKVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIA 181 Query: 163 --RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 RF L + L+ AL F ID T + GYT V P ++R E + + F D ++ Sbjct: 182 GSRFYYLFNDIVWLDFALLLFAIDYITQQ-GYTLVLPPYMLRGEVIQSVIDLDTFKDAIY 240 Query: 221 CT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI T+E S+ ++ E IE LPL+F ++P+FR EAG+A +D +G+ R H Sbjct: 241 KIENEDLYLIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVH 300 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + EDS+ H +++ AE I ++L+L YR+V++ +GDLG A K +DLEV Sbjct: 301 QFHKVEQFIFSTPEDSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEV 360 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q +RE+ SCS C ++Q+ RM RY D + + HTLN + +A R + AILEN Sbjct: 361 WMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNKRGYVHTLNSTAIASTRTITAILEN 420 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 Y DG V +P VLR Y+ K++I Sbjct: 421 YQREDGVVEVPKVLRKYLEIFPKAPKDYI 449 >gi|218661766|ref|ZP_03517696.1| seryl-tRNA synthetase [Rhizobium etli IE4771] Length = 409 Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats. Identities = 223/357 (62%), Positives = 285/357 (79%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV 70 P+ LD AL KR EP ++ +++LDEK R ++K +D+ +RRN S +IG A+++ N L Sbjct: 1 PKALDAALAKRGAEPLAQSLIALDEKRRSAVQKAQDLLSRRNLASKEIGAALSQKNAELA 60 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + LK E + LK LP++E+E+ ++ + L +S IPNVP ++VP+G ++N++ R+VG+ Sbjct: 61 EKLKAEVAELKTLLPMVEEEDRQLTAELNDALSRIPNVPFDDVPVGKDEHDNVVTRTVGE 120 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 KP H +EHFEIGEALG MDFDRA KLSG+RF+VLTG LA LERALGQFMIDLHT EH Sbjct: 121 KPRWNHTPKEHFEIGEALGYMDFDRAAKLSGSRFTVLTGPLARLERALGQFMIDLHTREH 180 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSL 250 GYTEVS+PL+VR EA++GTG +PKF +D+F TTDGR+LIPT+EV+LTNL EI++ + L Sbjct: 181 GYTEVSSPLMVRAEAVFGTGSLPKFEEDLFKTTDGRYLIPTAEVTLTNLVREEILDQEEL 240 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 PLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT E + EHERM +CAEE+L Sbjct: 241 PLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESAIAEHERMTACAEEVL 300 Query: 311 KRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 KRL LH+R ++LCTGD+GF + KTYDLEVWL GQN +REISSCS CG+FQ+RRMN+R Sbjct: 301 KRLGLHFRTMTLCTGDMGFGSRKTYDLEVWLPGQNTFREISSCSVCGDFQARRMNAR 357 >gi|68471585|ref|XP_720099.1| potential serine tRNA synthetase [Candida albicans SC5314] gi|20140251|sp|Q9HGT6|SYSC_CANAL RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|9931532|gb|AAG02209.1|AF290915_1 seryl-tRNA synthetase [Candida albicans] gi|46441951|gb|EAL01244.1| potential serine tRNA synthetase [Candida albicans SC5314] gi|238880695|gb|EEQ44333.1| seryl-tRNA synthetase [Candida albicans WO-1] Length = 462 Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats. Identities = 131/447 (29%), Positives = 213/447 (47%), Gaps = 27/447 (6%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI ++ + +PE + + KKR + + I++ ++ L +++ + NS Sbjct: 1 MLDINAFLVEKGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ L E L + + ++E E +L+ I+ + N+ E V Sbjct: 61 KEIGKRFKA--KEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESVVD 118 Query: 116 GTSANENILIRSVGKKPSAIHLSR----------EHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + H E+ L D +R ++ G R Sbjct: 119 SQDEENNELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 L + L +AL + + S GY + AP+++ E M T Q+ +F ++++ D Sbjct: 179 FLRNYGVFLNQALINYGLSF-LSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ ++ E E ++ LP+R+ + FR EAGS G+D G+ R H Sbjct: 238 EDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E S+ E +RM+ C+EE + L L YRVV + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + N + K+ H LN + A R + ILE Sbjct: 358 FPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTICCILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNNL-AVIK 424 NY DG V IP VLR Y+ I Sbjct: 418 NYQKEDGLV-IPEVLRKYIPGEPEFIP 443 >gi|330881215|gb|EGH15364.1| seryl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 265 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 149/260 (57%), Positives = 190/260 (73%), Gaps = 4/260 (1%) Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--- 224 G +A L RAL QFMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F T Sbjct: 5 RGPIARLHRALAQFMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKITREGE 64 Query: 225 -GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 +LIPT+EVSLTN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K Sbjct: 65 ADLYLIPTAEVSLTNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDK 124 Query: 284 CELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAG 343 E+V I EDS E + AE +L+ L+L YR ++LCTGD+GFSA KTYDLEVW+ Sbjct: 125 VEMVQIVAPEDSMAALESLTGNAERVLQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPS 184 Query: 344 QNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 Q+ YREISSCS CG+FQ+RRM +R+R+P + + HTLNGSG+AVGR L+A+LENY A Sbjct: 185 QDKYREISSCSNCGDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQA 244 Query: 404 DGSVTIPTVLRPYMNNLAVI 423 DGS+ +P VL+PYM L VI Sbjct: 245 DGSIRVPEVLKPYMGGLEVI 264 >gi|146319436|ref|YP_001199148.1| seryl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|145690242|gb|ABP90748.1| Seryl-tRNA synthetase [Streptococcus suis 05ZYH33] Length = 428 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 164/370 (44%), Positives = 229/370 (61%), Gaps = 5/370 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + I LD K R ++ +E+++A RN+ SA+I Sbjct: 44 MLDIKRIRTDFDGVAAKLATRGVAAETLANIKELDAKRREILVTVEELKAERNTVSAEIA 103 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N D L + L+ + E+ L +I+ +PN P + VP+G Sbjct: 104 QAKR--NKENADDKIAAMQKLSADVKNLDAQLLEIDEELNAIITVLPNTPHDSVPVGADE 161 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN+ +R G + H+++GE L ++D++R K++GARF A LERAL Sbjct: 162 EENVEVRRWGTPREFTFEPKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALY 221 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H +E GY E+ P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 222 NFMLDEHIAE-GYQEIITPYMVNHDSMFGTGQYPKFKEDTFELADTNFVLIPTAEVPLTN 280 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y +EI+E K LP+ FT ++PSFRSEAGSAGRDTRG++R HQF K E+V E S+ E Sbjct: 281 YYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFATPEQSYDE 340 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+M + AE IL++L L YRV++LCTGD+GFSA KTYDLEVW+ QN YREISSCS + Sbjct: 341 LEKMTANAENILQKLGLPYRVLALCTGDMGFSAAKTYDLEVWIPAQNAYREISSCSNTED 400 Query: 359 FQSRRMNSRY 368 FQ+RR RY Sbjct: 401 FQARRAQIRY 410 >gi|4458|emb|CAA28572.1| unnamed protein product [Saccharomyces cerevisiae] Length = 462 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 132/441 (29%), Positives = 202/441 (45%), Gaps = 26/441 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + NPE + + K R+ + + I+S + +++++ + N Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG N L E L +Q L ++E + LKK + + N+ V + Sbjct: 61 KDIGLKFK--NKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSR----------EHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + H EI L D DR K+ G R Sbjct: 119 SNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 + L +AL + + + GY + AP+++ E M T Q +F ++++ D Sbjct: 179 FFRNYGVFLNQALINYGLQF-LAAKGYIPLQAPVMMNKELMSKTAQPSEFDEELYKVIDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ +S E E LP+ + + FR EAGS G+D G+ R H Sbjct: 238 EDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E IT E S+ E E+M+S +EE K L L YR+V + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + + K+ H LN + A R L ILE Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNN 419 NY DG V +P VLR Y+ Sbjct: 418 NYQTEDGLV-VPEVLRKYIPG 437 >gi|260945325|ref|XP_002616960.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238848814|gb|EEQ38278.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 457 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 126/441 (28%), Positives = 205/441 (46%), Gaps = 26/441 (5%) Query: 1 MLDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + P+ + + +KR + + I+S + + ++ + N+ Sbjct: 1 MLDINAFLADKGGFPDKIKESQRKRGAPVEIVDEIISGYKNWTTIRFDLDAANKKLNALQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QIGQ L E L + L + E + + L+ ++ + N+ E V Sbjct: 61 KQIGQKFKA--KEDASELLAEKEKLTAEKKELTEAEQKADAELRFKVNQVGNIVHESVVD 118 Query: 116 GTSANENILIRSVGKK----------PSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + + H E+ L D +R K+ G R Sbjct: 119 SMDEENNELVRTWKPEGLKEIGEIAAATNAPAKFSHHEVLLKLDGYDPERGVKIVGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 L L +AL + + E GY + AP+++ + M T Q+ +F ++++ D Sbjct: 179 FLRKWGVFLNQALINYGLSF-LYEKGYLPLQAPVMMNKDVMAKTAQLSQFDEELYKVMDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ +S E E ++ LP+R+ + FR EAGS G+D G+ R H Sbjct: 238 DDEKYLIATSEQPISAYHSGEWFESPAEQLPIRYAGYSSCFRREAGSHGKDAWGIFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E S+ E +RM++ +EE + L L YRVV + +G+L +A K +DLE W Sbjct: 298 FEKIEQFVLTEPEKSWEEFDRMIANSEEFYQSLGLPYRVVGIVSGELNNAAAKKFDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + N K+ H LN + A R L ILE Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQSEKKYVHCLNSTLSATERALCCILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNN 419 NY DG + +P VLR Y+ Sbjct: 418 NYQKEDG-IVVPEVLRKYIPG 437 >gi|255726666|ref|XP_002548259.1| seryl-tRNA synthetase [Candida tropicalis MYA-3404] gi|240134183|gb|EER33738.1| seryl-tRNA synthetase [Candida tropicalis MYA-3404] Length = 462 Score = 314 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 127/447 (28%), Positives = 212/447 (47%), Gaps = 27/447 (6%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI +I + NP+ + + KKR + + I+S ++ + +++ + N+ Sbjct: 1 MLDINAFIVEKGGNPDLIKASQKKRGDSVELVDEIISDYKEWVKIRFDLDEHNKKLNTIQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ L E + + L ++E E ++ ++ + N+ E V Sbjct: 61 KEIGKKFKA--KEDASELVAEKEKIAAEKKELIEKEAEADKQVRFKVNQVGNIVHESVVD 118 Query: 116 GTSANENILIRSVGKKP----------SAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ K + H E+ L D DR ++ G R Sbjct: 119 SQDEENNELVRTWTPKDYKKIEQVAAGTNAPAKLSHHEVLLRLDGYDPDRGVRIVGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 L + L +AL + + ++ Y + AP+++ + M T Q+ +F ++++ D Sbjct: 179 FLRNYGVFLNQALINYGLSF-LAKKDYVPLQAPVMMNKDVMAKTAQLSQFDEELYKVIDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ ++ E E + LP+R+ + FR EAGS G+D G+ R H Sbjct: 238 EDEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E S+ E +RM+ C+EE + L L YRVV + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + N + K+ H LN + A R + ILE Sbjct: 358 FPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTICCILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNNL-AVIK 424 NY DG V +P VLR Y+ I Sbjct: 418 NYQKEDGLV-VPEVLRKYIPGEPEFIP 443 >gi|88608228|ref|YP_506450.1| seryl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] gi|88600397|gb|ABD45865.1| seryl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] Length = 415 Score = 314 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 172/424 (40%), Positives = 253/424 (59%), Gaps = 9/424 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D+++I NPE +K+R + +++L E+ + + + +++A +N + Sbjct: 1 MNDLEYIVSNPEGFTEMMKRRGVRFDPLPLITLYEERKSCVTSLNNLQASKNELTRSF-- 58 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + L + + +++ ++K ++C L+ ++ +PN+ E+VPIG Sbjct: 59 ---QVIQENKSELFEKAKVIDKEILRVKKHLQKICEQLELIVLDLPNILAEDVPIGEDER 115 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N++++S G + H E+G ALG++DF K+SGARFS G A L R L Sbjct: 116 SNVVVKSWGAVRDFGFEPKAHDELGVALGILDFLNVAKVSGARFSGFIGSGARLFRVLKD 175 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM++ +T EHG+ E P LV+++AMY GQ+PKF+ + F G L+PTSEVSL N Sbjct: 176 FMLEHNT-EHGHREYFLPYLVKEDAMYKAGQLPKFSQESFKVDGGMRLVPTSEVSLLNFV 234 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S LPLR T+ + FRSEAGS+G+DT+G++RQHQF K EL+S+T E S E E Sbjct: 235 SDNFYGETELPLRMTSYSECFRSEAGSSGKDTKGIIRQHQFGKVELLSVTEPEKSDDELE 294 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RML AE +L++L L YRVV+LC+GD+GF + KTYD+EVW+ Q YREISSCS CG+FQ Sbjct: 295 RMLCIAEGLLQKLKLPYRVVNLCSGDIGFCSKKTYDIEVWIPSQCCYREISSCSNCGDFQ 354 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 SRR+ + K F HTLN S +A+GR ++AILENY DGS+ +P VLR Sbjct: 355 SRRLAI--KYKFKKKKGFLHTLNASSLAIGRTIVAILENYQMHDGSIEVPEVLRSRF-GA 411 Query: 421 AVIK 424 IK Sbjct: 412 DFIK 415 >gi|171186061|ref|YP_001794980.1| seryl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] gi|229470723|sp|B1Y9Y4|SYS_THENV RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|170935273|gb|ACB40534.1| seryl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] Length = 447 Score = 314 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 128/442 (28%), Positives = 216/442 (48%), Gaps = 23/442 (5%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R NP+H+ L R L+ + + LD + R L ++++++R N S + +A Sbjct: 6 LEALRNNPDHVRKVLAARRLDVSLVDRFIELDGRWRQLKREVDELRRSYNQLSREGARAP 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + +V+ + L +L +EKE V ++L+ PN+ + VP+ ++ Sbjct: 66 PDRRREIVE----KARELAARLEKVEKEMEAVEREREELLWSFPNLIHDSVPVCPEGVDS 121 Query: 123 ILIRSVGKKPSA--------------IHLSREHFEIGEAL-GLMDFDRATKLSGARFSVL 167 + +R G H ++ E + G+ D +A +++G+RF L Sbjct: 122 VPVRHWGTIRVVKGAAAPEGVEYVVVEKPPVGHADMAEVVLGMADTLKAGEVAGSRFYYL 181 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGR 226 L L+ AL + +D + G+ V P +++ + + F D ++ + Sbjct: 182 FDDLVWLDFALAMYALDRLAQQ-GFRPVVPPYMLKFDVIRRVLDFDTFKDAIYKIEGEDL 240 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LI T+E + + + LPL F +P FR EAG+ RD +G+ R H F K E Sbjct: 241 YLIATAEHGIAAYLHKRELVEEELPLLFVGWSPCFRKEAGAGNRDLKGIFRVHIFHKVEQ 300 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + EDS+ HE + E +++ L L YRVV++C DLG A K YD+E W Q + Sbjct: 301 FVFSLPEDSWKWHEEITKNTESLIRDLGLPYRVVNICAHDLGAPAAKKYDIEAWYPAQGM 360 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 YRE++SCS ++QS R+ R +F HTLN +G+A R + AILEN+ DG+ Sbjct: 361 YRELASCSNVTDWQSYRLGIRV-TRKGMRREFVHTLNCTGLATTRTITAILENFQREDGA 419 Query: 407 VTIPTVLRPYMNNLAVIKKEHI 428 V IP LRPY+ + KE+I Sbjct: 420 VEIPKALRPYLEPIRAAPKEYI 441 >gi|331699395|ref|YP_004335634.1| seryl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] gi|326954084|gb|AEA27781.1| seryl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] Length = 420 Score = 314 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 177/430 (41%), Positives = 245/430 (56%), Gaps = 15/430 (3%) Query: 1 MLDIQWIRQNP--EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M D + + +P + + L +R + L I++ ++ RA S ++ Sbjct: 1 MHDPRVLL-DPATDAVRK-LARRGYSLDLPELEKLLTGRNSAIQRGDEARAE----SKRV 54 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 ++ + AL LK + E E+ E + L+ L+ IPN+P +E P GTS Sbjct: 55 ATSVKGASAEERPALVERARELKGIVSAAEDEQKEFDAQLQDLLLGIPNLPADESPDGTS 114 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + L+R+ G+ P+ I +H +I E LG++D RATKLSG RF+VL G A L+RA+ Sbjct: 115 DADAELVRTWGEPPT-IESPADHVDIAEKLGILDLPRATKLSGPRFAVLKGRGAALQRAI 173 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVS 235 G ++ID E+GYTE S P LV + M GTGQ+PKF D+F T +LIPT+EV Sbjct: 174 GAYLIDKAL-ENGYTEFSVPSLVTRQTMTGTGQLPKFEQDLFRTEVADRELFLIPTAEVP 232 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 LTNL++ E ++ +SLPL +T P FRSEAGS GRDTRG++R H+F K ELV S Sbjct: 233 LTNLHARETLDLESLPLAYTAHTPCFRSEAGSYGRDTRGLIRMHEFAKVELVRFVDPARS 292 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 E + ++ AE L+ L L YRVV L GD GFSA T+D+EVWL Q YREISSCS Sbjct: 293 REELDVLVGHAESALQGLGLAYRVVKLAAGDTGFSAALTFDIEVWLPSQGTYREISSCSD 352 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 G FQ+RR R + + S F TLNGSG+ +GR L+A+LE DGSV +P L P Sbjct: 353 FGVFQARRAGIRTKAKDG-SRGFAGTLNGSGLPIGRTLVAVLEQGQQPDGSVRLPEALVP 411 Query: 416 YMNNLAVIKK 425 Y A ++ Sbjct: 412 Y-AGFATLEP 420 >gi|212536014|ref|XP_002148163.1| seryl-tRNA synthetase [Penicillium marneffei ATCC 18224] gi|210070562|gb|EEA24652.1| seryl-tRNA synthetase [Penicillium marneffei ATCC 18224] Length = 466 Score = 314 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 125/433 (28%), Positives = 198/433 (45%), Gaps = 18/433 (4%) Query: 1 MLDIQWIRQN----PEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + + + ++R+ E +L L E R ++ I ++ N+ Sbjct: 1 MLDINDFVADRGGDLNKIRESQRRRYAPESVVEEVLELFEAARRARYEVTQIGSKINAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IGQ N L + L++Q E+ + I I N + VPI Sbjct: 61 KEIGQKKK--NKEDATELLQQKIDLEKQKKEAEESALAKEKERDRKIKTIGNYVHDSVPI 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N++ R+ + + H E+ L D +R K+ G R LTG+ Sbjct: 119 SDNEDNNVVERTWAPENVVVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------TDGRW 227 L AL + ++ GY P + +AM T Q+ +F ++++ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPHFMLKDAMAKTAQLEQFDEELYKVSESEDKDTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+S E + LPL++ + +R EAGS G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHSEEWFQEADLPLKYAGFSTCYRKEAGSHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T E S+ + M++ +EE K L L Y+VVS+ +G L +A K YDLE W Q Y Sbjct: 298 VLTNPEKSWEAFDDMIATSEEFYKSLGLPYQVVSIVSGALNNAAAKKYDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRYRDPN-SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 +E+ SCS C ++Q+R + RY + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQTRELEIRYGAKKADSKKAYVHALNATLCATERTLCCILENYQTEDG- 416 Query: 407 VTIPTVLRPYMNN 419 +P L+ Y+ Sbjct: 417 FNVPAPLQKYIPG 429 >gi|241952971|ref|XP_002419207.1| class II aminoacyl-tRNA synthetase, putative; cytosolic seryl-tRNA synthetase, putative [Candida dubliniensis CD36] gi|223642547|emb|CAX42796.1| class II aminoacyl-tRNA synthetase, putative [Candida dubliniensis CD36] Length = 462 Score = 314 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 130/447 (29%), Positives = 214/447 (47%), Gaps = 27/447 (6%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI ++ + +PE + + KKR + + I++ ++ L +++ + NS Sbjct: 1 MLDINAFLVEKGGDPEIIKASQKKRGDSVELVDEIINEYKEWVKLRFDLDEHNKKLNSVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ L E L + + ++E E +L+ ++ + N+ E V Sbjct: 61 KEIGKRFKA--KEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRAKVNQVGNIVHESVVD 118 Query: 116 GTSANENILIRSVGKKPSAIHLSR----------EHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + H E+ L D +R ++ G R Sbjct: 119 SQDEENNELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 L + L +AL + + S+ GY + AP+++ E M T Q+ +F ++++ D Sbjct: 179 FLRNYGVFLNQALINYGLSF-LSKKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ ++ E E ++ LP+R+ + FR EAGS G+D G+ R H Sbjct: 238 EDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E S+ E +RM+ C+EE + L L YRVV + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + N + K+ H LN + A R + ILE Sbjct: 358 FPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTICCILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNNL-AVIK 424 NY DG V IP VLR Y+ I Sbjct: 418 NYQKEDGLV-IPEVLRKYIPGEPEFIP 443 >gi|320583800|gb|EFW98013.1| Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase [Pichia angusta DL-1] Length = 464 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 130/449 (28%), Positives = 213/449 (47%), Gaps = 29/449 (6%) Query: 1 MLDI-QWIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI Q+I + NP+ + + +KR + + I+ L ++++ +N Sbjct: 1 MLDIIQFIEEKGGNPQAIRESQRKRGASVEIVDEIIKEYNDWTKLRFTLDELNKTQNKLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IGQ L + L ++ + +E E L+ + + N+ + V Sbjct: 61 KEIGQKFKAKL--DASELLQKKDDLVKEKAEITAKEQEADKKLRWKVFQVGNIVHDSVID 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE------------HFEIGEALGLMDFDRATKLSGAR 163 +N L+R+ H E+ L D +R K+ G R Sbjct: 119 SLDEADNKLVRTWAPSGVNFETLSNVATATGKQAKLSHHEVLLRLDGYDPERGVKIVGHR 178 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT- 222 L + L +AL + + TS++ YT + AP+++ + M T Q+ +F ++++ Sbjct: 179 GYFLRNYGVFLNQALINYGLSFLTSKN-YTPMQAPVMMNKDVMAKTAQLSEFDEELYKVL 237 Query: 223 --TDGRWLIPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 D ++LI TSE ++ +S+E E ++ LP+R+ + FR EAGS G+D G+ R Sbjct: 238 DGDDEKYLIATSEQPISAYHSNEWFESPAEQLPIRYAGYSSCFRREAGSHGKDAWGIFRV 297 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 H F K E I+ E S+ E +RM+ +EE + L L YRVVS+ +G+L +A K YDLE Sbjct: 298 HAFEKVEQFCISEPEKSWDEFDRMIQNSEEFYQSLGLPYRVVSIVSGELNNAAAKKYDLE 357 Query: 339 VWLAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 W Q ++E+ SCS C ++QSR + R + N K K+ H LN + A R L + Sbjct: 358 AWFPFQQEFKELVSCSNCTDYQSRNLEIRCGIKAMNQKEKKYVHCLNCTLCATERALCCV 417 Query: 397 LENYLNADGSVTIPTVLRPYMNNL-AVIK 424 LENY DG V +P VLR Y+ I Sbjct: 418 LENYQTDDGLV-VPKVLRKYIPGEPEFIP 445 >gi|171692755|ref|XP_001911302.1| hypothetical protein [Podospora anserina S mat+] gi|170946326|emb|CAP73127.1| unnamed protein product [Podospora anserina S mat+] Length = 450 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 127/437 (29%), Positives = 210/437 (48%), Gaps = 17/437 (3%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI +I + NPE + + +KRH + + +++L E +R A+ N Sbjct: 1 MLDINDFIAERGGNPEKIRESQRKRHAPEEAVDEVIALFEDHRKTQYAATQFNAKINEVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QIG V L + + L+++ + + E L + I N+ E VP+ Sbjct: 61 KQIGPKKKA--KEDVTELLAKKAELEKEKKDMLAQAAEKQQILNAKLKTIGNLVHESVPV 118 Query: 116 GTSANENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N ++R+ + H E+ E L D R K+ G R L Sbjct: 119 SNNEDNNEVVRTWAPEGVTFEKKNVLSHHEVLEKLDGYDPVRGVKVVGHRGYFLKKWGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR---WLIP 230 L +A+ + ++ + Y + P+L+ E M T Q+ +F ++++ T + +LI Sbjct: 179 LNQAIINYGLEF-LDQKDYIALGTPMLMLKEQMAKTAQLSQFDEELYKVTGDQADKYLIA 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 TSE ++ +S E ++SK LPL++ + FR EAG+ GRD G+ R H+F K E +T Sbjct: 238 TSEQPISAFHSDEWLQSKDLPLKYAGYSTCFRKEAGAHGRDVWGIFRVHEFTKVEQFCLT 297 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E S+ ++M++ +EE K L + YRVV++ +G L +A K DLE W Q ++E+ Sbjct: 298 DPEKSWEMFDQMIANSEEFYKSLGIPYRVVAIVSGALNNAASKKLDLEAWFPHQGEFKEL 357 Query: 351 SSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 SCS C ++QSR + R+ + + H LN + A R + AILEN+ DG V Sbjct: 358 VSCSNCTDYQSRDLEIRFGVKKQTEIKKTYVHALNSTLTATTRTICAILENFQTEDG-VK 416 Query: 409 IPTVLRPYMNNL-AVIK 424 IP LR Y+ I Sbjct: 417 IPEPLRKYLPGAPDFIP 433 >gi|146422756|ref|XP_001487313.1| seryl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 131/447 (29%), Positives = 215/447 (48%), Gaps = 27/447 (6%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI ++ + NPE + I+ KKR + + I+ + + +++++ + N+ Sbjct: 39 MLDINAFLVEKGGNPETIRISQKKRGAPVELVDEIIKDYKDWTKIRFELDEMNKKMNALQ 98 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QIGQ L + T E+ L ++E + + L+ ++ I N+ E V Sbjct: 99 KQIGQKYKA--KEDASELLKQKDTYTEEKKQLIEKEQKADTDLRFKVNQIGNIVHESVVD 156 Query: 116 GTSANENILIRSV----------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + + H E+ L D +R ++ G R Sbjct: 157 SQDEENNELVRTWLPEGVKEAGAIATATGAPAALSHHEVLLRLDGYDPERGVRIVGHRGY 216 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--- 222 L + L +AL + + + +GYT + AP+++ E M T Q+ +F ++++ Sbjct: 217 FLRNYGVFLNQALINYGL-HFLASNGYTPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG 275 Query: 223 TDGRWLIPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 D ++LI TSE ++ ++ E E + LP+R+ + FR EAGS G+D G+ R H Sbjct: 276 DDEKYLIATSEQPISAYHAGEWFESPEEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHA 335 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E S+ E +RM+ +E+ + L L YRVV + +G+L +A K YDLE W Sbjct: 336 FEKIEQFVLTEPEKSWEEFDRMIGLSEKFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAW 395 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + N K+ H LN + A R L ILE Sbjct: 396 FPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATQRALCCILE 455 Query: 399 NYLNADGSVTIPTVLRPYMNNL-AVIK 424 NY DG V +P VLR Y+ I Sbjct: 456 NYQKEDGLV-VPEVLRKYIPGEPEFIP 481 >gi|255943689|ref|XP_002562612.1| Pc20g00490 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587347|emb|CAP85378.1| Pc20g00490 [Penicillium chrysogenum Wisconsin 54-1255] Length = 470 Score = 313 bits (802), Expect = 4e-83, Method: Composition-based stats. Identities = 122/440 (27%), Positives = 208/440 (47%), Gaps = 20/440 (4%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ + + + + +KR + + +++L E+ R + + ++ N Sbjct: 1 MLDLADFVTERGGDIKKIKESQQKRFAPEEAVDEVVALYEEARRARYDVTQMGSQINGVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG + + N L + + L+ + LE+ + I I N E VP+ Sbjct: 61 KAIG--MKKKNKEDATELLAQKAELETKKKELEEAAVAKEVQRDRKIRTIGNYVHESVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 +N LI++ + + + H E+ L D +R K+ G R LTG+ Sbjct: 119 SNDEADNKLIKTWTPEGAEMQKPGCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GYT P + + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALINYGLEF-LFNKGYTPNQPPQFMLKDLMAKTAQLEQFDEELYKVTESEDKSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E ++ K LP+++ + +R EAGS G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDSEWLQDKDLPIKYAGYSTCYRKEAGSHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ EDS+ E M++ +EE + L L Y +V++ +G L +A K YDLE W Q Y Sbjct: 298 VLTKPEDSWQAFEDMMNTSEEFYQSLKLPYNIVAIVSGALNNAASKKYDLEAWFPFQQEY 357 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R + RY + + H LN + A R L +LENY DG Sbjct: 358 KELVSCSNCTDYQARALEIRYGAKKATDLKKTYVHALNSTLCATERTLCCVLENYQKEDG 417 Query: 406 SVTIPTVLRPYMNNL-AVIK 424 + +P VLR Y+ + Sbjct: 418 -IEVPEVLRKYIPGAPEFLP 436 >gi|190344834|gb|EDK36592.2| seryl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 313 bits (802), Expect = 4e-83, Method: Composition-based stats. Identities = 131/447 (29%), Positives = 215/447 (48%), Gaps = 27/447 (6%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI ++ + NPE + I+ KKR + + I+ + + +++++ + N+ Sbjct: 39 MLDINAFLVEKGGNPETIRISQKKRGAPVELVDEIIKDYKDWTKIRFELDEMNKKMNALQ 98 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QIGQ L + T E+ L ++E + + L+ ++ I N+ E V Sbjct: 99 KQIGQKYKA--KEDASELLKQKDTYTEEKKQLIEKEQKADTDLRFKVNQIGNIVHESVVD 156 Query: 116 GTSANENILIRSV----------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + + H E+ L D +R ++ G R Sbjct: 157 SQDEENNELVRTWLPEGVKEAGAIATATGAPAALSHHEVLLRLDGYDPERGVRIVGHRGY 216 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--- 222 L + L +AL + + + +GYT + AP+++ E M T Q+ +F ++++ Sbjct: 217 FLRNYGVFLNQALINYGL-HFLASNGYTPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG 275 Query: 223 TDGRWLIPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 D ++LI TSE ++ ++ E E + LP+R+ + FR EAGS G+D G+ R H Sbjct: 276 DDEKYLIATSEQPISAYHAGEWFESPEEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHA 335 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E S+ E +RM+ +E+ + L L YRVV + +G+L +A K YDLE W Sbjct: 336 FEKIEQFVLTEPEKSWEEFDRMIGLSEKFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAW 395 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + N K+ H LN + A R L ILE Sbjct: 396 FPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATQRALCCILE 455 Query: 399 NYLNADGSVTIPTVLRPYMNNL-AVIK 424 NY DG V +P VLR Y+ I Sbjct: 456 NYQKEDGLV-VPEVLRKYIPGEPEFIP 481 >gi|299134937|ref|ZP_07028128.1| seryl-tRNA synthetase [Afipia sp. 1NLS2] gi|298589914|gb|EFI50118.1| seryl-tRNA synthetase [Afipia sp. 1NLS2] Length = 486 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 182/492 (36%), Positives = 245/492 (49%), Gaps = 71/492 (14%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDI------------R 48 M DI+ IR NP D ALK+R LEP S +L++DE+ R I++ E Sbjct: 1 MHDIRSIRDNPAAFDAALKRRGLEPLSASLLAIDERRRGAIQEAEQALARRNAASKEIGE 60 Query: 49 ARRNSNSAQIGQAIAE------GNLSLVDALKNETSTLK-----------EQLPILEKEE 91 A++N ++A+ +AE L A K LK +++P E Sbjct: 61 AKKNKDAARADTLMAEVATLKVKLPELEAAAKQSEDELKTVLAQIPNLPLDEVPDGADEH 120 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANEN----------------------------- 122 V + P E V +G Sbjct: 121 GNVQHHIYGAARSYSFKPKEHVELGEGLGFMDFETAAKLSGARFVVLKKGLARLERAIGQ 180 Query: 123 ----ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + G L + L F+ + + + LER Sbjct: 181 FFLDVHTGEHGYAEVNPPLLVRDDAMFGTAQLPKFEDDQFFAAPGSFNIRKLVEILEREA 240 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 ID + ++ A + + + + +D RWLIPT+EV LTN Sbjct: 241 IDHEID--AAPFSLAKLGAIFDFNNASERAKTLLAEMVEDSR---VRRWLIPTAEVPLTN 295 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L I++ K LP+R T L P FR+EAG+AGRDTRGM+RQHQF K ELVSIT E+S E Sbjct: 296 LVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEESKNE 355 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCST 355 HERMLSCAEE+LKRL LHYRV++LCTGD+GF++ KTYD+EVW+ GQ YREISSCS Sbjct: 356 HERMLSCAEEVLKRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGENGMYREISSCSV 415 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 CG+FQ+RRM++RYR ++K +F HTLNGSG AVGR LIA++E Y DGS+ +P VL+P Sbjct: 416 CGDFQARRMDARYRGSDNK-PRFVHTLNGSGTAVGRALIAVMETYQQEDGSIAVPDVLQP 474 Query: 416 YMNNLAVIKKEH 427 YM L VI K++ Sbjct: 475 YMGGLKVIAKDN 486 >gi|121712548|ref|XP_001273885.1| seryl-tRNA synthetase [Aspergillus clavatus NRRL 1] gi|119402038|gb|EAW12459.1| seryl-tRNA synthetase [Aspergillus clavatus NRRL 1] Length = 474 Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats. Identities = 122/434 (28%), Positives = 208/434 (47%), Gaps = 19/434 (4%) Query: 1 MLDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 M+D+ + + + +KR + ++SL E R ++ + + N+ Sbjct: 1 MIDLADFVTDRGGDINKIKESQRKRFAPEDIVDEVVSLYEGARRARYEVMQVGSELNTLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ N D L + + L+++ E+ ++ I I N E VP+ Sbjct: 61 KEIGKRKK--NKEDADDLIQKKTALEKRKKEAEEYASQLEVKRDAKIRMIGNYVHESVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N ++R+ + + + H E+ L D +R K+ G R LTG+ Sbjct: 119 SNNEDNNQVVRTWSPENAVVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GYT P + E M T Q+ +F ++++ T+ R+ Sbjct: 179 LNLALINYGLEF-LWRKGYTPNQPPQFMLKELMAKTAQLEQFDEELYKVTESEDKSTDRY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E ++ K LP+++ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ E+S+ E M++ +EE + L L Y+VV++ +G L +A K YDLE W Q Y Sbjct: 298 VLTKPENSWEVFEEMMATSEEFYQSLGLPYQVVAIVSGALNNAASKKYDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R + RY + + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNATLCATERTLCCILENYQTDDG 417 Query: 406 SVTIPTVLRPYMNN 419 + +P LR Y+ Sbjct: 418 -LKVPEHLRKYIPG 430 >gi|255712569|ref|XP_002552567.1| KLTH0C07898p [Lachancea thermotolerans] gi|238933946|emb|CAR22129.1| KLTH0C07898p [Lachancea thermotolerans] Length = 461 Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats. Identities = 130/447 (29%), Positives = 215/447 (48%), Gaps = 27/447 (6%) Query: 1 MLDI-QWIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI Q+I + NPE + + K RH + + I++ ++ +++++ ++N Sbjct: 1 MLDITQFIEEKGGNPELIRQSQKARHASVEIVDEIIADYKEWVKTRFQLDELNKQQNKVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG N L E + + L + E + + LK+ + + N+ V + Sbjct: 61 KEIGLKFK--NKEDPKELLAEKDRIAAEKKKLSELEQKQDNDLKQKVFQVGNIVHPSVVV 118 Query: 116 GTSANENILIRSVGKK----------PSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 N L+RS + S S H E+ L D +R K+SG R Sbjct: 119 SNDEENNELVRSWKPENLSEVGTNASCSGKPASLSHHEVLLRLDGYDPERGVKISGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 + L +A+ + + + GY + AP+++ EAM T Q+ +F ++++ D Sbjct: 179 FFRNYGVFLNQAMINYGLSF-LASKGYIPLQAPVMMDKEAMSKTAQLSEFDEELYKVMDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ +S E E LP+R+ + FR EAG+ G+D G+ R H Sbjct: 238 DDEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYAGYSSCFRREAGAHGKDAWGVFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E S+ E +RM++ +EE + L+L YRVV + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVLTEPEKSWEEFDRMIATSEEFYQSLNLPYRVVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + + K+ H LN + A R L +LE Sbjct: 358 FPYQQEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRALCCVLE 417 Query: 399 NYLNADGSVTIPTVLRPYMNNL-AVIK 424 NY +G V +P VLR Y+ I Sbjct: 418 NYQTEEGLV-VPEVLRKYIPGEPEFIP 443 >gi|302869184|ref|YP_003837821.1| seryl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|315504339|ref|YP_004083226.1| seryl-tRNA synthetase [Micromonospora sp. L5] gi|302572043|gb|ADL48245.1| seryl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|315410958|gb|ADU09075.1| seryl-tRNA synthetase [Micromonospora sp. L5] Length = 427 Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats. Identities = 152/434 (35%), Positives = 227/434 (52%), Gaps = 16/434 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS----EYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD++ IR++ E + AL KR + + I LD++ R LI +I+ R RR + + Sbjct: 1 MLDMELIRKDREAVATALAKRLDPAEVTRALDDIQRLDQERRALITEIDAERQRRKAEAR 60 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +A G A + E L E LE + EV S L+ +S +PN+P E+V G Sbjct: 61 AYAEAKRSGGTPQPVAPEAERKQLAE----LESQLDEVQSRLRSAMSELPNLPAEDVVPG 116 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++ + AI R+H E+ ALGL+D +R KL G+ F + TG A LE Sbjct: 117 GKEANRVVRTF--GEAPAIEKVRDHVELSRALGLVDHERGVKLGGSGFWMYTGLGARLEW 174 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----RWLIPT 231 AL ++I+ + + GY + P L+ D A + GQ PKF DD++ ++L+PT Sbjct: 175 ALVNWLIEQNI-QAGYEFLLPPHLLLDSAGFAAGQFPKFHDDVYHIDKQSSSRGQFLLPT 233 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +E ++ Y EI+E+ LPL+ P +R EA + D RG +R HQF K E+ T Sbjct: 234 AETAILGAYQDEILETPKLPLKAFAYTPCYRREAAGSHSDERGTVRGHQFNKVEIFQFTL 293 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E + E M+ E ++ +L LH++ L GD S KT D+EVW+ Y+E+S Sbjct: 294 PEQAGEALEAMVGHVEGLVGKLGLHFQTSLLAAGDASASMKKTLDVEVWMPSTGKYKEVS 353 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S S G++Q+RR RYR+P +K +F HTLNGS +A R AILE DGSV +P Sbjct: 354 SVSWAGDYQARRAAIRYREPGAKQTRFVHTLNGSALATSRLFPAILEQCQQPDGSVVVPE 413 Query: 412 VLRPYMNNLAVIKK 425 VLR + + + Sbjct: 414 VLRDKLGTDRLTPR 427 >gi|242794649|ref|XP_002482418.1| seryl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] gi|218719006|gb|EED18426.1| seryl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] Length = 467 Score = 312 bits (800), Expect = 6e-83, Method: Composition-based stats. Identities = 120/433 (27%), Positives = 199/433 (45%), Gaps = 18/433 (4%) Query: 1 MLDIQWIRQN----PEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ + + + ++R+ + +L L E R + I ++ N+ Sbjct: 1 MLDVNDFVADRGGDINKIRESQRRRYAPESVVDEVLELFEAARRARYETTQISSKINAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IGQ N L + + L+++ E+ + I I N + VPI Sbjct: 61 KEIGQKKK--NKEDASELLKQKADLEKEKKESEENALAKEKERDRKIKTIGNYVHDSVPI 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N++ R + + H E+ L D +R K+ G R LTG+ Sbjct: 119 SDNEDNNVVERVWAPENVVVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------TDGRW 227 L AL + ++ GY P + +AM T Q+ +F ++++ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPQFMLKDAMAKTAQLEQFDEELYKVSESEDKETDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+S E + LP+++ + +R EAGS G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHSEEWLIDSDLPVKYAGYSTCYRKEAGSHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ + S+ + M++ +EE K L L Y+VVS+ +G L +A K YDLE W Q Y Sbjct: 298 VLTKPDKSWEAFDEMIATSEEFYKSLGLPYQVVSIVSGALNNAAAKKYDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRYRDPN-SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 +E+ SCS C ++Q+R + RY + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQTRELEIRYGAKKADAKKSYVHALNATLCATERTLCCILENYQTEDG- 416 Query: 407 VTIPTVLRPYMNN 419 + +P L+ Y+ Sbjct: 417 INVPAPLQKYIPG 429 >gi|322382264|ref|ZP_08056174.1| seryl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153766|gb|EFX46137.1| seryl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 417 Score = 312 bits (799), Expect = 8e-83, Method: Composition-based stats. Identities = 142/408 (34%), Positives = 221/408 (54%), Gaps = 6/408 (1%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 +++ +L LDE+ L+ +E IR +RN + QI + + + K E+ Sbjct: 8 NKNISLSIYDLLKLDEERSRLLVHVESIRKQRNELAKQIPMLLVQKKNEEAEQCKAESKQ 67 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 L+ +L E+E V S+ +++ +PN+ + P+G S +N+ +R K + Sbjct: 68 LQTRLADSEQELRRVQSAFDEMMLLVPNIVSPDTPVGKSDADNVPVRYWEKPVKFPFEIQ 127 Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 +H +G+ L L D R K++G+R VL G L RA+ Q IDL ++ +T + P+ Sbjct: 128 DHVVLGKNLDLFDLPRGVKMAGSRNYVLKGDGVLLHRAVQQLAIDLLLRKN-FTLMDVPV 186 Query: 200 LVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 LVR+E++ TG P + F + ++L TSEVSL + +S +I++ P+R Sbjct: 187 LVREESLQNTGYFPLGREQTFSIRNEDKFLAGTSEVSLVSCFSGDIVDVTE-PIRLAAAT 245 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLH 316 FR E G+AG+D RG+ R HQF K E V R + S + + + + AEE+L+ L+L Sbjct: 246 YCFRKEVGAAGKDVRGLYRVHQFAKVEQVVFCRNDRDESESVLQEITANAEELLQMLELP 305 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSL 376 YRVV++CTGD+ K YD+E W+ + Y E S S +FQSRR N RYRD L Sbjct: 306 YRVVAVCTGDMSQKTYKQYDIETWMPSRGDYGETHSSSNLHDFQSRRSNIRYRDERGN-L 364 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 ++ HTLN + VA R LI +LEN+ DGSV +P LRPYM ++ Sbjct: 365 EYCHTLNNTAVASPRILIPLLENHQREDGSVYLPPALRPYMGGRKELR 412 >gi|50303053|ref|XP_451464.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640595|emb|CAH03052.1| KLLA0A10593p [Kluyveromyces lactis] Length = 459 Score = 312 bits (798), Expect = 9e-83, Method: Composition-based stats. Identities = 124/441 (28%), Positives = 208/441 (47%), Gaps = 26/441 (5%) Query: 1 MLDI-QWIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI Q+I + NPE + + R + + I++ ++ +++++ + N Sbjct: 1 MLDITQFIEEKGGNPELIRKSQIARGASVEIVDEIIAGYKEWVKTRFQVDELNKQLNKVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG N L E + + +L + E E L+ ++ + N+ V + Sbjct: 61 KEIGLKFK--NKEDASELLAEKDRIVAEKKVLSEREQEEDKQLRSKVNQVGNIVHPSVVV 118 Query: 116 GTSANENILIRSVGKKPSAI----------HLSREHFEIGEALGLMDFDRATKLSGARFS 165 N L+RS + H EI L D +R K++G R Sbjct: 119 SNDEENNELVRSWMPENIKEVAQVATATGAEAKLSHHEILLRLDGYDPERGVKITGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--- 222 + L +AL + + + GYT + AP+++ + M T Q+ +F ++++ Sbjct: 179 FFRNYGVFLNQALINYGLSF-LASKGYTPLQAPVMMNKDVMAKTAQLSEFDEELYKVLDG 237 Query: 223 TDGRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 D ++LI TSE ++ +S E E LP+R+ + FR EAGS G+D G+ R H Sbjct: 238 DDEKYLIATSEQPISAYHSGEWFEKPQEQLPVRYVGYSSCFRREAGSHGKDAWGVFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E S+ E ++M++ +EE + L L YRVV + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVLTEPEKSWEEFDKMINYSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + + K+ H LN + A R L +LE Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLCATQRALCCVLE 417 Query: 399 NYLNADGSVTIPTVLRPYMNN 419 NY +G + +P VLR Y+ Sbjct: 418 NYQTDEG-LKVPEVLRKYIPG 437 >gi|145595910|ref|YP_001160207.1| seryl-tRNA synthetase [Salinispora tropica CNB-440] gi|145305247|gb|ABP55829.1| seryl-tRNA synthetase [Salinispora tropica CNB-440] Length = 427 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 146/437 (33%), Positives = 229/437 (52%), Gaps = 22/437 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKR----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD++ IR++ + + AL KR + + + LD++ R LI +I+ R RR + + Sbjct: 1 MLDMELIRKDRDAVASALAKRLDLAEVTRALDELSQLDQQRRSLITEIDGERQRRKAEAR 60 Query: 57 QIGQAIAEGNLSL---VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 +A G +A + + + L E E EV L+ +S +PN+P ++V Sbjct: 61 AYAEAKRAGREPEPTVAEAGRRQLAEL-------ETELGEVQDQLRVRMSELPNLPADDV 113 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 G ++ +P AI R+H E+ LGL+D +R KL G+ F + TG A Sbjct: 114 VPGGKEANRVVKTF--GEPPAIDKVRDHVELSRLLGLVDHERGVKLGGSGFWMYTGLGAR 171 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----RWL 228 LE AL ++ID + GY + P L+ + A + GQ PKF DD++ + ++L Sbjct: 172 LEWALVNWLIDQNV-AAGYEFLLPPHLLLETAGFAAGQFPKFYDDVYHLSRQSAPRGQFL 230 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 +PT+E ++ Y +EI+++ LPL+ P +R EA + D RG +R HQF K E+ Sbjct: 231 LPTAETAILGAYQNEILDTAKLPLKVFAYTPCYRREAAGSHSDERGTVRGHQFNKVEVFQ 290 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 E + E M++ AE +++RL LHY+ L GD + KT D+EVW+ Y+ Sbjct: 291 FALPEQADAALEAMVTHAEGLVERLGLHYQRSLLAAGDSSAAMRKTLDIEVWMPSTGKYK 350 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 E+SS S G++Q+RR RYR+P K +F HTLNGS +A R AILE + DGSV Sbjct: 351 EVSSVSWGGDYQARRAAIRYREPGGKQTRFVHTLNGSALATSRLFPAILEQFQQPDGSVL 410 Query: 409 IPTVLRPYMNNLAVIKK 425 +P VLR + + + Sbjct: 411 VPEVLRDRLGTDRLTPR 427 >gi|50426035|ref|XP_461614.1| DEHA2G01694p [Debaryomyces hansenii CBS767] gi|49657284|emb|CAG90061.1| DEHA2G01694p [Debaryomyces hansenii] Length = 460 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 128/447 (28%), Positives = 209/447 (46%), Gaps = 27/447 (6%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI ++ + PE + + KKR + + I++ + + ++ + N+ Sbjct: 1 MLDINAFLVEKGGEPEKIKESQKKRGDSIEIVDEIIADYKDWTKIRFDLDALNKELNALQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QIGQ L + L ++E + + L+ ++ + N+ + V Sbjct: 61 KQIGQKFKA--KEDAGDLLAQKDKLVADKKSFIEQEQKADADLRNKVNQVGNLVHKSVVE 118 Query: 116 GTSANENILIRSVGKK----------PSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 + N L+R+ + + H EI L D +R ++ G R Sbjct: 119 SQDEDNNELVRTWKPESLAEIGSIASCTGAEAKLSHHEILLRLDGYDPERGVRIVGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 L + L +AL + + +++ YT + AP+++ E M T Q+ +F ++++ D Sbjct: 179 FLRNYGVFLNQALINYGLSF-LAKNDYTPLQAPVMMNKEVMAKTAQLSQFDEELYKVMDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ ++ E E + LP+R+ + FR EAGS G+D G+ R H Sbjct: 238 DDEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E S+ E +RM+ +EE K L L YRVV + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVLTEPEKSWEEFDRMIGLSEEFYKSLGLPYRVVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + N K+ H LN + A R L ILE Sbjct: 358 FPFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATQRALCCILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNNL-AVIK 424 NY DG V IP VLR Y+ I Sbjct: 418 NYQTEDGLV-IPEVLRRYIPGEPEFIP 443 >gi|116515129|ref|YP_802758.1| hypothetical protein BCc_193 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256983|gb|ABJ90665.1| seryl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 433 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 174/435 (40%), Positives = 255/435 (58%), Gaps = 14/435 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+ + I+ N L+K++ + LD + L E + S + Sbjct: 1 MLNFKDIKNNYSFFKKKLEKKNYFLNIKKFKKLDYIRKNLQINTEIKISEHKKLSKYM-- 58 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + LKN+ + ++ +L+K+ ++ + ++ IPN+P ++VP+G Sbjct: 59 IFYKKIYTNTYLLKNKLINSRNKIFLLKKKLEKIKKKIHNMLILIPNIPYDDVPLGNKEK 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N I GK H EIG L D+ ++ +SG+ FS++ G +A+L RALGQ Sbjct: 119 NNKEIFRWGKIKKYNFPILNHIEIGNKLQGFDWKVSSNISGSGFSIMKGSIAYLHRALGQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-----------WLI 229 FM+++HT HGY E+ P +V+ + MYGTGQ+PKF +D+F + +LI Sbjct: 179 FMLNIHTKIHGYKEIYVPFIVKKKCMYGTGQLPKFKNDLFHIQNMHHLNKKNNYDNFFLI 238 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PTSEVSL NL ++I+ S LPL+FT L+ FR+E + G+D +G++R HQF K E+V I Sbjct: 239 PTSEVSLINLVQNKILLSHELPLKFTALSACFRAEPNTYGKDAQGLIRNHQFDKVEIVQI 298 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 +DS E + + AE+IL+ L L YR + LC G+LGFS+ KTYDLEVWL Q LYRE Sbjct: 299 VHPKDSEKTLEELTNHAEKILQLLKLPYRKMLLCEGELGFSSKKTYDLEVWLPSQKLYRE 358 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 ISSCS G+FQSRR+N++Y+D F HTLNGSG+AVGR L AILEN+ ++G+V I Sbjct: 359 ISSCSMIGDFQSRRINAKYKDKKKNKNFFLHTLNGSGLAVGRTLAAILENFQCSNGTVKI 418 Query: 410 PTVLR-PYMNNLAVI 423 P VLR PYMN + + Sbjct: 419 PKVLRNPYMNGMKFL 433 >gi|262341206|ref|YP_003284061.1| serine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272543|gb|ACY40451.1| serine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 431 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 152/427 (35%), Positives = 234/427 (54%), Gaps = 9/427 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML +IR+N E + + LKKR+ + + + IL LDEK +I + I + NS S +I Sbjct: 11 MLRTSFIRKNREKVLLGLKKRNFKEEYLIDEILILDEKKKIAQNVLNKILEKENSISKKI 70 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 GQ I G +++LK +++ LK++ + + +++ +L++ ++ IPN+P E+V Sbjct: 71 GQIINLGKNFEIESLKEKSTFLKKEKKNVNVKFNKIVQALEEKLNQIPNIPDEKVKNHFE 130 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+ + I H+E+ + L+D + TK+ G FSV A L+R+L Sbjct: 131 KNDILFQEGEIHC--HIENPIPHWELSKKFCLLDSNLGTKICGPGFSVYMEKGAKLQRSL 188 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLT 237 ++ +D + + Y E S P L+ E+ Y TGQIP + M+ D +LIPT EV + Sbjct: 189 IRYFLDKNI-QALYKEYSLPYLINKESGYATGQIPDKENQMYFIEKDNLYLIPTGEVPIM 247 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N Y +I LP++ TT FR EAGS G RG+ R HQF K E++ IT ++ S+ Sbjct: 248 NCYRDKIFTYADLPVKATTYTSCFRREAGSYGSKVRGLNRLHQFEKVEIIQITTQDSSYF 307 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ + ILK LDL +R++ L DLGFS+ TYD EV+ Q + E+SS S C Sbjct: 308 SLEEMILHVKNILKSLDLPFRLIRLNGPDLGFSSAITYDFEVYSIAQKKWLEVSSISNCL 367 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +FQS R+N RY+ +K HTLNGS +A+ R + +LEN+ + + IP VL PY Sbjct: 368 DFQSNRLNLRYKTITGN-IKSCHTLNGSALALPRIMATLLENHQTEN-QINIPKVLVPYT 425 Query: 418 NNLAVIK 424 IK Sbjct: 426 -GFDRIK 431 >gi|58429138|gb|AAW78018.1| monomeric seryl tRNA-synthetase [synthetic construct] Length = 436 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 231/428 (53%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +RQ PE A++++ + E +L++D + + L K++++++ RN + ++ + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDREVQELKKRLQEVQTERNQVAKRVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E +AL L E+ LE+ E + L+ L+ +P P P+G Sbjct: 61 APPEEK----EALIARGKALGEEAKRLEEALREKEAKLEALLLQVPLPPWPGAPVGGEEA 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + R VG P +H + E G + RA++ SG+R L G LA E AL + Sbjct: 117 NREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGDLASYEEALLR 174 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNL 239 F D G+T P R++A GTG P + D + ++ + T+EV L L Sbjct: 175 FAADFMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTTGTAEVVLNAL 233 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 +S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S Sbjct: 234 HSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDR 293 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS Sbjct: 294 AFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALL 353 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM Sbjct: 354 DWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM 412 Query: 418 NNLAVIKK 425 V++ Sbjct: 413 -GKEVLEP 419 >gi|71894601|ref|YP_278709.1| seryl-tRNA synthetase [Mycoplasma synoviae 53] gi|71851389|gb|AAZ43998.1| seryl-tRNA synthetase [Mycoplasma synoviae 53] Length = 421 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 164/428 (38%), Positives = 255/428 (59%), Gaps = 9/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML+I++I +N E + L R+ + + LSL ++ L+ ++ +++ S Q G Sbjct: 1 MLNIKYILENKELVRDKLISRNFDITIFDNFLSLAQERGKLMSSAQEQKSKLTKLSKQFG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +L + LK E +K L + +E+ L ++++ IPN+PL+E+P G Sbjct: 61 IYK--NDLEKLSLLKKEIEKVKSLETQLTNQANELNFKLDEILATIPNLPLDEIPFGKDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N +I + H+EI L ++D RA K SG+RF + + L RAL Sbjct: 119 NDNKVINVYEIGTKKDFE-KPHYEIASELNMIDIPRAVKQSGSRFVIYKNEGSKLVRALI 177 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTN 238 FM+DLH + GY E P LVR E ++GTGQ+PKF +DMF +LIPT+E++LTN Sbjct: 178 NFMLDLH-KQKGYDEFLTPYLVRSEMLFGTGQLPKFKEDMFKVENSDLYLIPTAEITLTN 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y++EI+ P + FRSE GS+G+DT+G++RQHQF K E+V +T ++D+ E Sbjct: 237 YYNNEIVN-LDKPFKACAYTECFRSEVGSSGKDTKGIIRQHQFKKVEIVKVTTKDDAIKE 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 ML A+ +L +L++ +R V L TGD+GFS+ KT DLE+WL ++ YRE+SS S G+ Sbjct: 296 FNLMLEDAKNVLFKLEIPFREVLLSTGDMGFSSRKTIDLELWLPSESKYREVSSVSYMGD 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RY++ + + ++ HT+NGS +AV R + AI+E YL+ DG++ IP VL PYM Sbjct: 356 FQARRAKIRYKNQD-QKTEYAHTMNGSALAVDRLVAAIIEQYLDTDGNLVIPKVLVPYM- 413 Query: 419 NLAVIKKE 426 + I K+ Sbjct: 414 GMDKIYKK 421 >gi|149245668|ref|XP_001527311.1| seryl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] gi|146449705|gb|EDK43961.1| seryl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] Length = 461 Score = 310 bits (793), Expect = 4e-82, Method: Composition-based stats. Identities = 126/441 (28%), Positives = 207/441 (46%), Gaps = 26/441 (5%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ +I + +PE + I+ KKR + + I+ ++ + +++ + N+ Sbjct: 1 MLDVNAFIVEKGGDPEKIKISQKKRGASVELVDEIVKDYKEWVRIRFDLDETNKKLNAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ L L Q +L + E L+ ++ + N+ + V Sbjct: 61 KEIGKKFKA--KEDASELIKTKEELSAQKKLLIETEATADKDLRYKVNQVGNIVHDSVVD 118 Query: 116 GTSANENILIRSVGKKP----------SAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 N LI++ K + S H E+ L D +R ++ G R Sbjct: 119 SQDEANNDLIKTWLPKDYEKTAQVAAGTNAPASLSHHEVLLRLDGYDPERGVRIVGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 L L +AL + + GYT + AP+++ E M T Q+ +F ++++ D Sbjct: 179 FLRNVGVWLNQALINYGLSF-LHSKGYTPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ ++ E E + LP+R+ + FR EAGS G+D G+ R H Sbjct: 238 EDEKYLIATSEQPISAYHAGEWFESPQEQLPIRYAGYSSCFRREAGSHGKDAWGIFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T + S+ E +RM+ +E+ + L L YRVV + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVLTEPDKSWEEFDRMIGASEDFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + N K+ H LN + A R + ILE Sbjct: 358 FPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATERTICCILE 417 Query: 399 NYLNADGSVTIPTVLRPYMNN 419 NY DG V IP VLR Y+ Sbjct: 418 NYQKEDGLV-IPEVLRKYIPG 437 >gi|206974285|ref|ZP_03235202.1| seryl-tRNA synthetase [Bacillus cereus H3081.97] gi|217957908|ref|YP_002336452.1| seryl-tRNA synthetase [Bacillus cereus AH187] gi|222094107|ref|YP_002528164.1| seryl-tRNA synthetase [Bacillus cereus Q1] gi|229142782|ref|ZP_04271236.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|206747525|gb|EDZ58915.1| seryl-tRNA synthetase [Bacillus cereus H3081.97] gi|217064889|gb|ACJ79139.1| seryl-tRNA synthetase [Bacillus cereus AH187] gi|221238162|gb|ACM10872.1| SerS [Bacillus cereus Q1] gi|228640676|gb|EEK97053.1| Seryl-tRNA synthetase [Bacillus cereus BDRD-ST26] Length = 427 Score = 310 bits (793), Expect = 4e-82, Method: Composition-based stats. Identities = 148/428 (34%), Positives = 233/428 (54%), Gaps = 7/428 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI +IR + + L + ++ + E I+ LD + R LI IE R + S + Sbjct: 1 MLDINFIRNHQQDLSLIANQKGINISIERIIQLDFERRKLIHDIELARFTKKKLSNDMKD 60 Query: 61 AIAEGNLS-LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + +G+ L+ ++K + + + L ++ + + L+ +PN+ + PIG S Sbjct: 61 FVLKGDNQHLIKSIKLQIDEINKSLKANQQNLESILNEYNTLMLLVPNIISSDTPIGLSD 120 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +N++++ G+KP+ ++H E+G +L ++D R K++G R L A L RA+ Sbjct: 121 KDNVVVKECGRKPTFTFSIKDHIELGHSLDIIDIKRGVKVAGTRNYYLKNMGASLHRAVQ 180 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 Q ID H + G+T + P +V +E TG P D + ++LI TSEV + + Sbjct: 181 QLAID-HLIQKGFTLLEVPAMVNEEMFINTGFFPIGQDQTYKLANSNKYLIGTSEVPIVS 239 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSF 296 YS+E + + P++ ++ FRSE G+AGRD +G+ R HQF K E V + E S Sbjct: 240 YYSNEFVNIEK-PIKLAGISNCFRSEVGAAGRDVKGLYRVHQFSKVEQVILCENNVEKSN 298 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + AEEIL+ L+L YRVVS+CTGD+G K YD+E W+ +N Y E S S Sbjct: 299 LILEEITQNAEEILQLLELPYRVVSVCTGDIGQGVFKKYDIETWMPSRNSYGETQSASNL 358 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQSRR RY+D N + +K+ HTLN + +A R LI +LE + DGS+ IP LR Y Sbjct: 359 LDFQSRRSKIRYKDNNGE-IKYCHTLNNTAIATPRILIPLLEVHQQEDGSIYIPRALRKY 417 Query: 417 MNNLAVIK 424 +NN I+ Sbjct: 418 LNNQEYIE 425 >gi|301633651|gb|ADK87205.1| serine--tRNA ligase [Mycoplasma pneumoniae FH] Length = 420 Score = 310 bits (793), Expect = 4e-82, Method: Composition-based stats. Identities = 164/428 (38%), Positives = 241/428 (56%), Gaps = 10/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R N + L +R + E Q E + D+ R L+ +IE ++ + Q+ Sbjct: 1 MLDRNKLRNNLDFFKKKLVERGVSESQFEAYVQADKAMRKLLHQIELANQKQTLLAKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + L E+ LK++L L E + ++L+ +PN+ E VP+G Sbjct: 61 K------KKGDLKLLKESKELKQKLEQLNIAFKEAETLSQELLLNLPNIADESVPVGRDE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+ + G+KP H+E+ E L L+ FD+ATKL+GARF T A L RA+ Sbjct: 115 TANLELLKEGRKPVFDFTPLPHWELCERLQLVAFDKATKLTGARFVAYTDKAAKLLRAIA 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 MID + ++ Y E + P++V + ++ GTGQ+PKF DD+F +L PT EV L N Sbjct: 175 SLMIDFN--KNKYQEWNVPVIVNETSLTGTGQLPKFKDDVFKLENTRYYLSPTLEVQLAN 232 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+++EI LP +T +FR EAGSAG+ T+G +R HQF K ELV + ++ E Sbjct: 233 LHANEIFTEGELPKYYTATGVNFRQEAGSAGKQTKGTIRLHQFQKVELVKFCKPSEAIHE 292 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M AE+IL L + +R + LC+GD+GFSA KTYDLEVW+AG N YRE+SSCS+CG+ Sbjct: 293 LEEMTRDAEQILLELKIPFRRLLLCSGDMGFSAQKTYDLEVWMAGCNEYREVSSCSSCGD 352 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RR RY+D + + TLNG+ +A+ R AILE+Y G V IP L Y++ Sbjct: 353 FQARRAMIRYKDLTTGKNTYVATLNGTALAIDRIFAAILEHYQTKAGEVMIPQALLKYLD 412 Query: 419 NLAVIKKE 426 + K + Sbjct: 413 FDKITKPK 420 >gi|15897519|ref|NP_342124.1| seryl-tRNA synthetase [Sulfolobus solfataricus P2] gi|284174838|ref|ZP_06388807.1| seryl-tRNA synthetase [Sulfolobus solfataricus 98/2] gi|12643258|sp|O33780|SYS_SULSO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|6015871|emb|CAB57698.1| seryl-trna synthetase [Sulfolobus solfataricus P2] gi|13813768|gb|AAK40914.1| Seryl-tRNA synthetase (serS) [Sulfolobus solfataricus P2] gi|261602280|gb|ACX91883.1| seryl-tRNA synthetase [Sulfolobus solfataricus 98/2] Length = 457 Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats. Identities = 140/449 (31%), Positives = 229/449 (51%), Gaps = 29/449 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R+NPE L LK+R ++ + + LD+K R +++++E +R + N S+QI + Sbjct: 6 LELLRKNPEDLKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVEKLRHQHNVLSSQISKLS 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E ++ E+ L + L EKE E+ + +L+S +PN+ ++VP G + N Sbjct: 66 GEERKKKIE----ESKNLLKILEEKEKELEEIENERDRLLSSLPNLVADDVPNGPDDSYN 121 Query: 123 ILIRSVGKKPSAIHLSREH-------------FEIGEALGLMDFDRATKLSGA------- 162 + I+ GK +E + + L Sbjct: 122 VPIKFWGKFKVYEGDVQEFLKQIKDAKVNYEVIKWKPKGHAEMLEDVLHLGNTLKAAEIA 181 Query: 163 --RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 RF L + L+ +L F ID T + GYT V P ++R E + + F D ++ Sbjct: 182 GSRFYYLFNDIVWLDFSLLLFAIDYITQQ-GYTLVLPPYMLRGEVIQSVIDLDTFKDAIY 240 Query: 221 CT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI T+E + ++ E IE LPL+F ++P+FR EA +A +D +G+ R H Sbjct: 241 KIENEDLYLIATAEHPIAAMFFKEEIEKDKLPLKFAGISPAFRKEASAANKDLKGIFRVH 300 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + EDS+ H +++ AE I ++L+L YR+V++ +GDLG A K +DLEV Sbjct: 301 QFHKVEQFIFSTPEDSWKYHSELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEV 360 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q +RE+ SCS C ++Q+ RM RY D + + HTLN + +A R + AILEN Sbjct: 361 WMPAQAKFREMVSCSNCTDWQAFRMKIRYVDRKNNRRGYVHTLNSTAIASTRTITAILEN 420 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 Y DG V +P VLR Y+ K++I Sbjct: 421 YQREDGVVEVPKVLRKYLEAFPKAPKDYI 449 >gi|302682558|ref|XP_003030960.1| hypothetical protein SCHCODRAFT_77152 [Schizophyllum commune H4-8] gi|300104652|gb|EFI96057.1| hypothetical protein SCHCODRAFT_77152 [Schizophyllum commune H4-8] Length = 453 Score = 309 bits (791), Expect = 6e-82, Method: Composition-based stats. Identities = 120/428 (28%), Positives = 203/428 (47%), Gaps = 17/428 (3%) Query: 10 NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 N E + + +KR + + ++ + + + + ++ + N+ +IGQ Sbjct: 15 NAEEIRESQRKRGHSVELVDEVIQMYQDWVKIDFEANNLAKQVNALQKEIGQKKKA--KE 72 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 D L + L +++ ++E + LKK + N+ + VP+ + ++N+ +R+ Sbjct: 73 NADDLVAQKKELDQKVAAKKQESKDFEILLKKKARGVGNIVGKNVPVSQTEDDNVTVRTW 132 Query: 129 GKKPSAIHLSRE-----HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 H E+ L MD +R K+SG R LTG L +AL + + Sbjct: 133 FPSGETDEPPARPGILAHHEVLLRLDAMDLERGVKVSGHRGYYLTGDGVDLNQALISYGL 192 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLY 240 D Y ++ P + E M T Q+ +F ++++ D ++LI TSE ++ L+ Sbjct: 193 DF-LRSKSYRKIQPPFFMNKEQMAKTAQLDQFDEELYKVIADDDEKYLIATSEQPISVLH 251 Query: 241 SHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 S E E LP + + FR EAG+AGRD G+ R HQF K E IT S+ Sbjct: 252 SDEWFESPETQLPRMYAGYSTCFRKEAGAAGRDMWGIFRVHQFEKVEQFCITDPAKSWEM 311 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M+ +EE + L L YRVV++ +G L +A + YDLE + Q Y+E+ SCS C + Sbjct: 312 FDTMIGNSEEFYQSLGLRYRVVAIVSGALNLAAAQKYDLEAYFPFQKEYKELVSCSNCTD 371 Query: 359 FQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +Q+RR+ R + + + H LNG+ A R L ++EN+ +G V IP LRPY Sbjct: 372 YQARRLEVRCGLKKQDQTRKVYVHMLNGTLCATERALCCLVENWQTPEGLV-IPPPLRPY 430 Query: 417 MNNLAVIK 424 M + Sbjct: 431 MQGREFLP 438 >gi|126136162|ref|XP_001384605.1| Seryl-tRNA synthetase, cytoplasmic (Serine--tRNA ligase) (SerRS) [Scheffersomyces stipitis CBS 6054] gi|126091803|gb|ABN66576.1| Seryl-tRNA synthetase, cytoplasmic (Serine--tRNA ligase) (SerRS) [Scheffersomyces stipitis CBS 6054] Length = 460 Score = 309 bits (791), Expect = 6e-82, Method: Composition-based stats. Identities = 132/446 (29%), Positives = 216/446 (48%), Gaps = 26/446 (5%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI ++ + PE + I+ KKR + + I++ + ++ ++ + N+ Sbjct: 1 MLDINSFLVEKGGEPEKIKISQKKRGASVELVDEIIADYKNWTVIRFDLDAKNKQINAIQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QIGQ L E L E+ L ++E + + L+ ++ + N+ E V Sbjct: 61 KQIGQKYKA--KEDASELLAEKDKLTEEKKKLIEQEQKADTDLRFKVNQVGNLVHESVVD 118 Query: 116 GTSANENILIRSVGKK---------PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 + N L+R+ + + + H E+ L D +R ++ G R Sbjct: 119 SMDEDNNELVRTWKPESYEVGQVAAATGAPAALSHHEVLLRLDGYDPERGVRIVGHRGYF 178 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-- 224 L + L +AL + ++ +++ YT + AP+++ E M T Q+ +F ++++ D Sbjct: 179 LRNYGVFLNQALINYGLNF-LAKNDYTPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDGE 237 Query: 225 -GRWLIPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 ++LI TSE ++ ++ E E + LP+R+ + FR EAGS G+D G+ R H F Sbjct: 238 DEKYLIATSEQPISAYHAGEWFESPQEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAF 297 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E +T E S+ E +RM+ +EE K L L YRVV + +G+L +A K YDLE W Sbjct: 298 EKIEQFVLTEPEKSWQEFDRMIGLSEEFYKSLGLPYRVVGIVSGELNNAAAKKYDLEAWF 357 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 Q Y+E+ SCS C ++QSR + R + N K+ H LN + A R L ILEN Sbjct: 358 PFQKEYKELVSCSNCTDYQSRNLEIRCGIKQQNQTEKKYVHCLNSTLSATQRALCCILEN 417 Query: 400 YLNADGSVTIPTVLRPYMNNL-AVIK 424 Y DG V IP VLR Y+ I Sbjct: 418 YQKEDGLV-IPEVLRKYIPGEPEFIP 442 >gi|83764980|dbj|BAE55124.1| unnamed protein product [Aspergillus oryzae] Length = 494 Score = 309 bits (791), Expect = 7e-82, Method: Composition-based stats. Identities = 122/460 (26%), Positives = 201/460 (43%), Gaps = 40/460 (8%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI NP + + +KR + IL+L E+ R ++ I ++ N Sbjct: 1 MLDIADFVSDRGGNPNKVKESQRKRFAPESVVDEILTLYEEARRARYEVMQIGSQLNGLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ N +L E + L+++ E + + I N + VP+ Sbjct: 61 KEIGKKKK--NKEDASSLLEEKAALEQRKKDAEDLALQKEKQRDSKLRTIGNYVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE----------------------HFEIGEALGLMDF 153 + A ++ H E+ L D Sbjct: 119 SNNEVGVYRSPKYSFGKGADMHHKDDNVVVKTWVPENVTVEKRDCLSHHEVLTRLDGYDP 178 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 +R K+ G R LTG+ L AL + ++ GY P + + M T Q+ Sbjct: 179 ERGVKIVGHRGYCLTGYGLFLNLALINYGLEF-LWGKGYKPNQPPQFMLKDMMAKTAQLE 237 Query: 214 KFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 +F ++++ T+ ++LI TSE L+ L+ E ++ K LP+++ + +R EAG+ Sbjct: 238 QFDEELYKVTESEDKSTDKYLIATSEQPLSALHDGEWLQDKDLPIKYAGYSTCYRKEAGA 297 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 G+D G+ R HQF K E +T+ E S+ E M++ +EE K L L Y++V++ +G L Sbjct: 298 HGKDAWGIFRVHQFEKIEQFVLTKPEQSWEAFEEMMATSEEFYKSLGLPYQIVTIVSGAL 357 Query: 328 GFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGS 385 +A K YDLE W Q Y+E+ SCS C ++Q+R + RY + + H LN + Sbjct: 358 NNAASKKYDLEAWFPFQGEYKELVSCSNCTDYQARALEIRYGTKKATDVKKSYVHALNAT 417 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL-AVIK 424 A R L ILENY DG + +P LR Y+ + Sbjct: 418 LCATERTLCCILENYQKEDGFI-VPEPLRKYIPGAPEFLP 456 >gi|46116720|ref|XP_384378.1| hypothetical protein FG04202.1 [Gibberella zeae PH-1] Length = 471 Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats. Identities = 124/439 (28%), Positives = 202/439 (46%), Gaps = 24/439 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI+ + NPE + + ++RH + + +++L + R + I + N Sbjct: 1 MLDIEDFIEERGGNPEKIRESQRRRHAPVELVDEVIALWQDARKTQYGVTQIGTQINGVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + E T K++ +K + + N + V + Sbjct: 61 KEIGLKKRAKEDATDLLKEKEELTEKKKKQEELAAAKNAELKVKAKL--VGNYVHDSVHV 118 Query: 116 GTSANENILIRSVGKKP--SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N + R+ + + H ++ LG D R KL G R LTG+ Sbjct: 119 SDNEDNNTIERTWAPETFDKTTQAALSHHDVLLRLGGYDPVRGVKLVGHRGYCLTGYGMF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------TDGR 226 L AL + GYT P ++ + M T Q+ +F ++++ R Sbjct: 179 LNLALVNYATSF-LFHKGYTPNQPPFMLNRDQMAKTAQLSQFDEELYRVSEGPTPSESDR 237 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LI TSE L+ L++ E I+ LP+++ + FR EAGS GRD G+ R HQF K E Sbjct: 238 YLIATSEQPLSALHAEEWIQPAELPIKYCGYSTCFRKEAGSHGRDAWGVFRVHQFEKVEQ 297 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + +DS+ + ++M++ +EE K L L Y+VV + TG L +A K YDLE W Q Sbjct: 298 FVLCGPDDSWDQFDQMMANSEEFYKSLGLPYQVVGIVTGALNNAAAKKYDLEAWFPFQKE 357 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSK------SLKFTHTLNGSGVAVGRCLIAILENY 400 Y+E+ SCS C ++Q+R + R+ K ++ H LN + A R L ILENY Sbjct: 358 YKELVSCSNCTDYQTRELEIRHGAKKGKQIVGGGKKEYVHALNATLCATERTLCCILENY 417 Query: 401 LNADGSVTIPTVLRPYMNN 419 +G V +P VLR Y+ Sbjct: 418 QTEEGLV-VPEVLRKYIPG 435 >gi|119719325|ref|YP_919820.1| seryl-tRNA synthetase [Thermofilum pendens Hrk 5] gi|119524445|gb|ABL77817.1| seryl-tRNA synthetase [Thermofilum pendens Hrk 5] Length = 452 Score = 308 bits (790), Expect = 8e-82, Method: Composition-based stats. Identities = 136/442 (30%), Positives = 223/442 (50%), Gaps = 31/442 (7%) Query: 6 WIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 +R NPE L +K R ++P E + LD + R K+ ++++ R N SA++ Sbjct: 7 LLRNNPEKLIENMKARFMDPSLVENAIKLDVEWRAKKKEYDELKHRLNEVSAKV----RS 62 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + L E L ++ +LEKE E+ + + + +PNV E VPIG N Sbjct: 63 STGQEREKLILEARELSSKVSLLEKELAELEAKRELALRRLPNVIHESVPIGPDETFNKP 122 Query: 125 IRSVGKKPSA-----------------------IHLSREHFEIGEALGLMDFDRATKLSG 161 +R G+ H E E+ GL + +A +++G Sbjct: 123 VRYWGRPKVFREHLEGFLKETKEKGFVVDYEVLDWKPLGHAEFLESKGLTNTLKAAEVAG 182 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 ARF + L L AL + ++ + G+T + PL++R E + G F D ++ Sbjct: 183 ARFYYMFNDLVWLAIALELYALEY-LAGKGFTILLPPLMLRREILEGVVSFDDFKDMIYK 241 Query: 222 TT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 + +LI T+E + L++ E++ K LPL + ++ SFR EAG+ G+DT+G+ R H Sbjct: 242 IDGEDLYLIGTAEHPIAALHAGEVLAEKELPLLYAGVSESFRKEAGAHGKDTKGIFRVHH 301 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E + ++S+ HE+++ AEE+ + L++ YR+V++ +GDLG A K YDLE W Sbjct: 302 FEKVEQFVFSHPDESWEWHEKLIRNAEELWQGLEIPYRIVNIASGDLGVVAAKKYDLEAW 361 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK-FTHTLNGSGVAVGRCLIAILEN 399 + Q YRE+ SCS C ++QS R+N RY + K + HTLN + +A+ R + AI+EN Sbjct: 362 MPAQGKYREMVSCSNCTDWQSYRLNIRYAEVRGGPSKGYVHTLNSTALAIQRTITAIVEN 421 Query: 400 YLNADGSVTIPTVLRPYMNNLA 421 + DG V +P L Y+ Sbjct: 422 HQTPDGYVKVPKALHKYLEPFE 443 >gi|126460407|ref|YP_001056685.1| seryl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] gi|166223275|sp|A3MX52|SYS_PYRCJ RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|126250128|gb|ABO09219.1| seryl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] Length = 454 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 126/444 (28%), Positives = 214/444 (48%), Gaps = 25/444 (5%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R++PE + L R ++ + L+LD K R L K+I+++R N S + +A Sbjct: 6 LEALRKSPEEVRKVLLARRVDASLVDKFLALDAKWRQLKKEIDELRHLYNQLSREGAKAP 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E + + L +L +E+E E+ ++L+ PN+ E VP+ ++ Sbjct: 66 PERRRE----ISEKARELAAKLEKVEEEVKELERQREELLYSFPNLIHESVPVCPEGVDS 121 Query: 123 ILIRSVGKKPSAIH-----LSREHFEIGEAL------------GLMDFDRATKLSGARFS 165 + +R G + + + E + D +A +++G+RF Sbjct: 122 VPVRHWGTVKVSNAALQSLDPGVEYVVVEKEPVGHADMAEVVLQMADTLKAGEVAGSRFY 181 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-D 224 L L L+ AL + +D ++ G+ V P +++ + + F D ++ + Sbjct: 182 YLFDDLVWLDFALAMYAMD-QLAQKGFRPVIPPYMLKFDIIRRVLDFDTFKDAIYKIEGE 240 Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 +LI T+E + + + LP + +P FR EAG+ RD +G+ R H F K Sbjct: 241 DLYLIATAEHGIAAYLYKRELLEEELPQLYVGWSPCFRKEAGAGNRDLKGIFRVHIFHKV 300 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E + E+S+ HE + EE+++ L L YRVV++C DLG A K YD+EVW Q Sbjct: 301 EQFVFSLPEESWKWHEEITRNTEELIRGLGLPYRVVNICAHDLGAPAAKKYDIEVWYPAQ 360 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 YRE++SCS ++QS R+ R ++ HTLN +G+A R + AILEN+ D Sbjct: 361 AKYRELASCSNVTDWQSYRLGIRV-TRKGMKKEYVHTLNCTGLATTRTITAILENFQRDD 419 Query: 405 GSVTIPTVLRPYMNNLAVIKKEHI 428 G V IP LRPY+ + KE+I Sbjct: 420 GVVEIPKALRPYLEPIKAAPKEYI 443 >gi|328856864|gb|EGG05983.1| hypothetical protein MELLADRAFT_77928 [Melampsora larici-populina 98AG31] Length = 451 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 133/444 (29%), Positives = 215/444 (48%), Gaps = 23/444 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNS 53 M+++Q ++ NPE + + +KR E + +L+L + + ++ +IR NS Sbjct: 1 MIELQLLQTGKGGNPESVKASQRKRGGEKAAELVDEVLNLYKNWTKVGFQLREIRTEANS 60 Query: 54 NSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 +IG+A L L ++ LEKEE + +LK I N+ E V Sbjct: 61 IKKKIGEAKKA-KTEPGPELWEAKEKLDNEIKRLEKEESDAEVTLKARAGNIGNIVHESV 119 Query: 114 PIGTSANENILIRSVGKKPSAIHLSRE----HFEIGEALGLMDFDRATKLSGARFSVLTG 169 P+ S ++N +IR+ P++ H + L ++D +R K++G R L Sbjct: 120 PVSMSEDDNTIIRTWTPTPNSPPTKDPALLSHDVVMNRLNMIDQERGIKVAGHRGFFLVE 179 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----D 224 L +A+ + +D + Y ++ P ++R M T Q+ +F + ++ T D Sbjct: 180 DGVDLNQAMINYGLDF-LRQRKYKKMMTPFMMRKSMMAKTAQLEEFDEALYGLTGDGGED 238 Query: 225 GRWLIPTSEVSLTNLYSHEIIESK--SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 ++LI TSE L+ L++ E E+ LPLR+ + FR EAGS GRDT G+ R HQF Sbjct: 239 DKYLIATSEQPLSALHADEWFENPKEQLPLRYAGYSTCFRKEAGSHGRDTWGIFRVHQFE 298 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 K E +T S+ E M++ +E + L L YRVV + +G L +A K DLE W Sbjct: 299 KIEQFCVTDPSSSWEMFEEMVASSEAFYQSLGLSYRVVGIVSGALNNAAAKKIDLEAWFP 358 Query: 343 GQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 Y+E+ S S C ++QSR + R + + H LNG+ A R L ++ENY Sbjct: 359 SMGEYKELVSVSNCTDYQSRSLEVRCGIKKQGDTQKVYVHMLNGTLCATERALCCLVENY 418 Query: 401 LNADGSVTIPTVLRPYMNNLAVIK 424 +G + IP VL+PYM N + Sbjct: 419 QTPEG-MNIPEVLQPYMRNRTFLP 441 >gi|218295476|ref|ZP_03496289.1| seryl-tRNA synthetase [Thermus aquaticus Y51MC23] gi|218244108|gb|EED10634.1| seryl-tRNA synthetase [Thermus aquaticus Y51MC23] Length = 422 Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats. Identities = 142/428 (33%), Positives = 231/428 (53%), Gaps = 11/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +RQ+PE A+ + ++ E +L+LD + + L ++++++ RN + ++ + Sbjct: 1 MVDLKRLRQDPETFRKAIALKGVDLDLEALLALDREVQSLKARLQEVQTERNRIAKEVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E + L L E+ LE+ E + L++L+ +P P P+G + Sbjct: 61 APPEARPA----LVARGKALAEEAKALEEALREKETRLQELLLEVPLPPWPGAPVGPDDS 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ I+ VG +H + E G + R +K+SG+R L G LA E AL + Sbjct: 117 ANVEIKRVGTPREFPFPPLDHVSLLEKNGWWEP-RVSKVSGSRTYALRGDLALYELALIR 175 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 F +D + G+T ++ P R+ A GTG P D ++ +L T+EV L L Sbjct: 176 FAMDFMA-KKGFTPLTLPSYAREAAFIGTGHFPAAKDQVWPIAGTDLYLTGTAEVVLNAL 234 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 ++ EI++ + LP R+ AP+FRSEAGSAG+D RG++R HQF K E +T E S Sbjct: 235 HAGEILKKEELPKRYAGYAPAFRSEAGSAGKDVRGLMRVHQFHKVEQYVLTEATLEASDQ 294 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + +L AEEI+ L+L YR++ + TGD+G + DLEVW+ + YRE SCS Sbjct: 295 AFQELLQNAEEIVSLLELPYRLLEVSTGDMGPGKWRQVDLEVWVPSEGRYRETHSCSALL 354 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR RYRD + ++ +TLN + +A R L+ +LEN+ DG V +P L PYM Sbjct: 355 DWQARRTGLRYRDEEGR-VRHAYTLNNTALATPRILVMLLENHQLPDGRVRVPEALVPYM 413 Query: 418 NNLAVIKK 425 V++ Sbjct: 414 -GKEVLEP 420 >gi|218883767|ref|YP_002428149.1| seryl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] gi|254783023|sp|B8D3V1|SYS_DESK1 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|218765383|gb|ACL10782.1| Seryl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] Length = 459 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 143/449 (31%), Positives = 225/449 (50%), Gaps = 31/449 (6%) Query: 6 WIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 +R NPE L +KKR ++P + LD + R L+ +++++R R N S I + Sbjct: 8 LLRDNPELLKEHVKKRFMDPSLVDEAYKLDLEWRRLLSQVQELRHRHNVISRDISKLP-- 65 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 A NE L Q+ LEK+ E+ ++ + +PN+ E VP+G N+ Sbjct: 66 --EPERSARINEARELLSQMEELEKKLKEIEDLREEALLKLPNIVHETVPVGPDDTYNVP 123 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLM------------------------DFDRATKLS 160 IR GK + + E G D +A +++ Sbjct: 124 IRFWGKPKVWSGYIEQFMQQTERYGFKVEYELVNWKPVGHADMLEYVLRLGDTVKAGEVA 183 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G+RF L + L+ AL + ID T GY V P ++R + M G + F D ++ Sbjct: 184 GSRFYYLFDDIVFLDIALLMYAIDSLT-SKGYKLVLPPYMLRHKVMSGVIDLATFKDAIY 242 Query: 221 CTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI T+E SL L++ E I + LPL++ ++P FR EAG+ RD +G+ R H Sbjct: 243 KIEGEDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAGNRDLKGIFRVH 302 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + E+S+ E ++ AE++ K L+L YRVV++ +GDLG A K YDLE Sbjct: 303 QFHKVEQYVYAKPEESWALMEELIGNAEDLFKGLELPYRVVNIASGDLGAPAAKKYDLET 362 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q L+RE+ SCS ++QS R+ +R ++ HTLN + +A R + +ILEN Sbjct: 363 WMPAQGLFREMVSCSNTTDWQSYRLKTRLVRRKGMVKEYVHTLNSTAIASTRTITSILEN 422 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 N DG+VT+P VLR Y+ +++I Sbjct: 423 RQNEDGTVTVPRVLRKYLEVFNKAPRDYI 451 >gi|55980844|ref|YP_144141.1| seryl-tRNA synthetase [Thermus thermophilus HB8] gi|67461668|sp|Q5SJX7|SYS_THET8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|55772257|dbj|BAD70698.1| seryl-tRNA synthetase [Thermus thermophilus HB8] Length = 421 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 234/428 (54%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +RQ PE A++++ + E +L+LD++ + L K++++++ RN + ++ + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLALDQEVQELKKRLQEVQTERNQVAKRVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E +AL L E+ LE+ E + L+ L+ +P P P+G Sbjct: 61 APPEEK----EALIARGRALGEEAKRLEEALREKEAQLEALLLQVPLPPWPGAPVGGEEA 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + R VG P +H + E G + R +++SG+R L G LA E AL + Sbjct: 117 NREIKR-VGSPPEFSFPPLDHVALMEKNGWWEP-RISQVSGSRSYALKGDLALYELALLR 174 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 F +D G+ ++ P R++A GTG P + D ++ +L T+EV L L Sbjct: 175 FAMDFMA-RRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNAL 233 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 +S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S Sbjct: 234 HSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDR 293 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS Sbjct: 294 AFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDVEVYLPSEGRYRETHSCSALL 353 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM Sbjct: 354 DWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPKALVPYM 412 Query: 418 NNLAVIKK 425 V++ Sbjct: 413 -GKEVLEP 419 >gi|68471848|ref|XP_719967.1| potential serine tRNA synthetase [Candida albicans SC5314] gi|46441814|gb|EAL01108.1| potential serine tRNA synthetase [Candida albicans SC5314] Length = 458 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 127/434 (29%), Positives = 206/434 (47%), Gaps = 23/434 (5%) Query: 10 NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 +PE + + KKR + + I++ ++ L +++ + NS +IG+ Sbjct: 10 DPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKA--KE 67 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 L E L + + ++E E +L+ I+ + N+ E V N L+R+ Sbjct: 68 DAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESVVDSQDEENNELVRTW 127 Query: 129 GKKPSAIHLSR----------EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + H E+ L D +R ++ G R L + L +AL Sbjct: 128 TPENYKKPEQIAAATGAPAKLSHHEVLLRLDGYDPERGVRIVGHRGYFLRNYGVFLNQAL 187 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVS 235 + + S GY + AP+++ E M T Q+ +F ++++ D ++LI TSE Sbjct: 188 INYGLSF-LSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDGEDEKYLIATSEQP 246 Query: 236 LTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++ ++ E E ++ LP+R+ + FR EAGS G+D G+ R H F K E +T E Sbjct: 247 ISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEPE 306 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ E +RM+ C+EE + L L YRVV + +G+L +A K YDLE W Q Y+E+ SC Sbjct: 307 KSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQQEYKELVSC 366 Query: 354 STCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S C ++QSR + R + N + K+ H LN + A R + ILENY DG V IP Sbjct: 367 SNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTICCILENYQKEDGLV-IPE 425 Query: 412 VLRPYMNNL-AVIK 424 VLR Y+ I Sbjct: 426 VLRKYIPGEPEFIP 439 >gi|108864577|gb|ABA94785.2| seryl-tRNA synthetase family protein, expressed [Oryza sativa Japonica Group] Length = 382 Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats. Identities = 126/382 (32%), Positives = 197/382 (51%), Gaps = 18/382 (4%) Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + S+ AL E LKE L LE++ ++ L+ IPN + P+G + Sbjct: 1 MKGKLEPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDAPVGGEES 60 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ + VG + + R+H ++G+ L L DFD A ++SG++F L LE AL Sbjct: 61 S-VVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVN 119 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 + I S+ G+T + P +VR + G P+ + + LI T+E+ + Sbjct: 120 WAITE-VSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQVYSIDNSDQCLIGTAEIPVGG 178 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ I+ LP ++ + FR+EAG+AG TRG+ R HQF K E+ R E+S Sbjct: 179 IHMDSILPDSDLPRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEESDKC 238 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE +++ EE+ L LH++ + + TGDLG A + +D+E W+ G + Y EISS S C + Sbjct: 239 HEELITIEEELYASLGLHFKTLDMATGDLGAPAYRKFDIEAWMPGLDRYGEISSASNCTD 298 Query: 359 FQSRRMNSRYRD----------PNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 +QSRR+ R+R K +F HTLN + VAV R +I ILEN+ D Sbjct: 299 YQSRRLGIRFRPSPADPPPANAKKGKGSSGPTQFVHTLNATAVAVPRLIICILENFQQED 358 Query: 405 GSVTIPTVLRPYMNNLAVIKKE 426 G+V IP LRP+M L V+ + Sbjct: 359 GTVVIPEPLRPFMGGLEVLSPK 380 >gi|224035863|gb|ACN37007.1| unknown [Zea mays] Length = 383 Score = 307 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 127/383 (33%), Positives = 200/383 (52%), Gaps = 19/383 (4%) Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + S+ AL E LKE L LE++ ++ L+ IPN +VP+G + Sbjct: 1 MKGKLDPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDVPVGGEES 60 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +L + VG + S ++H ++G+ L L DFD A ++SG++F L LE AL Sbjct: 61 S-VLRKEVGSQRSFNFAIKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVN 119 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTN 238 + I S+ G+T + P +VR + G P+ + + LI T+E+ + Sbjct: 120 WAISE-VSKKGFTPLITPEIVRSSVVEKCGFQPRAKNTQVYSIEDSDQCLIGTAEIPVGG 178 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ I+ +LPL++ + FR+EAG+AG TRG+ R HQF K E+ R E+S Sbjct: 179 IHMDSILAESALPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESGKW 238 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HE +++ E++ L LH++ + + TGDLG A + +D+E W+ G Y EISS S C + Sbjct: 239 HEELITIEEDLYASLGLHFKTLDMATGDLGAPAYRKFDIEAWMPGLERYGEISSASNCTD 298 Query: 359 FQSRRMNSRYR----------DPNSK-----SLKFTHTLNGSGVAVGRCLIAILENYLNA 403 +QSRR+ RYR K +F HTLN + VAV R ++ ILEN+ Sbjct: 299 YQSRRLGIRYRPSPSEPPSTSTKKGKGAASGPTQFVHTLNATAVAVPRLIVCILENFQQG 358 Query: 404 DGSVTIPTVLRPYMNNLAVIKKE 426 DGS+ +P LRPYM L ++ + Sbjct: 359 DGSIVVPEPLRPYMGGLELLSPK 381 >gi|307108989|gb|EFN57228.1| hypothetical protein CHLNCDRAFT_56101 [Chlorella variabilis] Length = 424 Score = 307 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 112/445 (25%), Positives = 189/445 (42%), Gaps = 62/445 (13%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ NPE + + ++R + + +L LD K R +++ + N + Sbjct: 1 MLDINLFREERGGNPEIVRESQRRRFKDVGLVDRVLELDAKWREARGQLDTLNMDFNKLN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + L+ + +K ++ E+ E + I I N+ + VP+ Sbjct: 61 KEIGALRKAKQDATA--LQERSKEMKARIKAQEELEKSLSEERDAAIVPIGNLVPDSVPV 118 Query: 116 GTSA-NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 +N + + H ++ L + D + Sbjct: 119 DNDEARDNNAVVKEFGERRQEEGLLNHVDLVLLLDIADLEAGAAKP-------------- 164 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPT 231 M Q+ +F ++++ T + ++LI T Sbjct: 165 ------------------------------VMAECAQLSQFDEELYKVTGEGEEKYLIAT 194 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 SE +L ++ + + + LP+++ + FR EAGS GRDT G+ R HQF K E I Sbjct: 195 SEQTLCAMHRRDWFDKQQLPIKYIGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFVIAS 254 Query: 292 E--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 +DS+ E M++ AE + L YRVV++ +G L +A K YDLE W YRE Sbjct: 255 PHDDDSWVALEEMIANAEAFYQALGFPYRVVNIVSGALNDAAAKKYDLEAWFPASRAYRE 314 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNS----KSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + SCS C ++Q+RR++ R R ++ H LNG+ A R L +LENY ADG Sbjct: 315 LVSCSNCTDYQARRLDIRLRSAKGPGGESKKEYVHMLNGTLSATERTLCCLLENYQTADG 374 Query: 406 SVTIPTVLRPYMNNLAVIKKEHILE 430 V +P L+P+M + I + + Sbjct: 375 -VRVPEALQPFMMGIDFIPFKKAFD 398 >gi|303276687|ref|XP_003057637.1| seryl-tRNA synthetase [Micromonas pusilla CCMP1545] gi|226460294|gb|EEH57588.1| seryl-tRNA synthetase [Micromonas pusilla CCMP1545] Length = 376 Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats. Identities = 128/375 (34%), Positives = 192/375 (51%), Gaps = 8/375 (2%) Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + DAL E LK++L LE+E + ++++ IPN +VPIG Sbjct: 1 MKGKMDKEKRDALIEEGKALKDELAGLEQELGALETTMQIEGQKIPNDTHPDVPIGGEEV 60 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 L R VG K H ++GE LG+ DF+ K+ G+RF LTG A LE AL Sbjct: 61 A-ALRREVGAKRDFSFAVANHVDVGERLGMFDFETGGKVCGSRFVYLTGAGAMLELALIN 119 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--RWLIPTSEVSLTN 238 + + G+ + P LVR M G P+ + + L T+E+ L Sbjct: 120 WAMQ-KVVAKGFKPMVVPDLVRQSTMEKCGFQPRAENTQVYSIQDSELCLAGTAEILLGG 178 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y E +E K LP++ + FR+EAG+AG TRGM R HQF K E+ ++ E S Sbjct: 179 VYMDEALEEKQLPIKMAAFSHCFRTEAGAAGAATRGMYRLHQFSKVEMFVVSTPEQSDAI 238 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+ +++ EE+ L H++V+ + + DLG A + +D+E W+ Y EISS S C + Sbjct: 239 HDELIAIEEEMYDELGFHFKVLDMSSEDLGAPAYRKFDIEAWMPALERYGEISSASNCTD 298 Query: 359 FQSRRMNSRYRDP--NSKSLKF--THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +Q+RR+N +YR + K HTLN + AV R +I ILEN+ DGSV +P L+ Sbjct: 299 YQARRLNIKYRPNPVDGKKQPLTHCHTLNATACAVPRMIITILENFQEEDGSVRVPEPLQ 358 Query: 415 PYMNNLAVIKKEHIL 429 P+M L V+ E + Sbjct: 359 PFMGGLKVLTPEDVA 373 >gi|260947608|ref|XP_002618101.1| hypothetical protein CLUG_01560 [Clavispora lusitaniae ATCC 42720] gi|238847973|gb|EEQ37437.1| hypothetical protein CLUG_01560 [Clavispora lusitaniae ATCC 42720] Length = 485 Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats. Identities = 132/435 (30%), Positives = 216/435 (49%), Gaps = 17/435 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 LDI+ I + + ++K+R E Y++ +K L + + R AQ+G Sbjct: 54 LDIKSIISRQDEMRQSIKRRGGSEESDLSYVIENRQKEINLQNERNRLVNERKKLGAQLG 113 Query: 60 QAIAE-GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 Q + + L+N K+Q+ +E + V ++ + + +PN VP Sbjct: 114 QLMKNAEKSDDISRLQNRLLEFKKQIGSIENDLETVSENVHRSLEALPNWLDPTVPEDPL 173 Query: 119 ANENIL----IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 E + + +H IGE L +M+F A+++SG+ + L G A L Sbjct: 174 VPEIVDIIGGDNESTISSEMPPTTYDHKTIGEKLNIMNFSTASRISGSSWYYLVGDGALL 233 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIP 230 E+AL Q+ + GY V P +V+ E ++ G P+ + + L Sbjct: 234 EQALVQYALQ-QARARGYRMVIPPSIVKSEVVHACGFKPRDQNGEKQVYAIENEPLSLTG 292 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+E+ + L+S IE +P R+ ++ ++R+EAG+ G+DT G+ R H+F K EL T Sbjct: 293 TAEIPMGALHSSSTIE---VPTRYVGVSRAYRAEAGARGKDTTGLYRVHEFTKVELFHFT 349 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + S E E + IL L + +V+++ T DLG A K YD E W+ G+ Y E+ Sbjct: 350 HPDLSAKELEEIKDFQISILSGLGIKAKVLNMPTTDLGAPAMKKYDCEAWMPGRAKYGEL 409 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE-NYLNADGSVTI 409 +SCS CG++QSRR+ R+++ + K L + HTLNG+ +AV R ++AILE NY SV I Sbjct: 410 TSCSNCGDYQSRRLGIRFKNKSGK-LDYVHTLNGTAMAVPRVIVAILEQNYDPTTQSVRI 468 Query: 410 PTVLRPYMNNLAVIK 424 P VLRP+M+ I Sbjct: 469 PEVLRPFMDGKEFIT 483 >gi|260814103|ref|XP_002601755.1| hypothetical protein BRAFLDRAFT_121181 [Branchiostoma floridae] gi|229287057|gb|EEN57767.1| hypothetical protein BRAFLDRAFT_121181 [Branchiostoma floridae] Length = 512 Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats. Identities = 122/467 (26%), Positives = 213/467 (45%), Gaps = 47/467 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + KR+ + + ++ DE+ R L + + + +N S Sbjct: 3 LDLDLFRVDRGGDPNKIRENQSKRYKDVTLVDNVVQADEQWRKLRYQADTLNRLKNLCSK 62 Query: 57 QIGQAIAEGN-----------LSLVDALKNE------TSTLK-------EQLPILEKEEH 92 IG+ + + ++ L E + +K + + Sbjct: 63 TIGEKMKKKEPVGEESESTLTEDELEKLTPEALQAMTVNQIKQIRTIIDKSIVQNTAGRA 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 EV ++ + I N+ +VPI +E+ + H ++ + D Sbjct: 123 EVEKQRQESLKEIGNILHADVPISNDEDEDNRTERTNGDCTVRKK-YSHVDLITMIDGYD 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 +R +G+R + G LE+AL Q+ + + E GYT + P ++ + M Q+ Sbjct: 182 GERGAVTAGSRGYYMRGIAVFLEQALIQYALRI-LYEKGYTALYTPFFMKKDVMSEVAQL 240 Query: 213 PKFADDMF------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F D+++ T D ++LI TSE + + E ++ + LP+++ ++ Sbjct: 241 SQFDDELYKVIGKGSEKGDDQTEDVKYLIATSEQPIAAYHRDEWMKPEELPIKYAGISTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 FR E GS GRDTRG+ R HQF K E +++ +DS+ M+ AEE K L + YR+V Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKVEQFVLSKPDDSWGLFHEMIGNAEEFYKTLGIPYRIV 360 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKSLKF 378 ++ +G L +A YDLE W G +RE+ SCS C ++Q+RR+ RY ++ +F Sbjct: 361 NIVSGALNNAAAMKYDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNEKPEF 420 Query: 379 THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN-LAVIK 424 H LN + A R + AILEN+ +G + IP VLR +M + I Sbjct: 421 VHMLNATMCATTRVICAILENHQTEEG-IVIPEVLRQFMPGAIEFIP 466 >gi|239613234|gb|EEQ90221.1| seryl-tRNA synthetase [Ajellomyces dermatitidis ER-3] gi|327357489|gb|EGE86346.1| seryl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 487 Score = 306 bits (783), Expect = 5e-81, Method: Composition-based stats. Identities = 123/448 (27%), Positives = 200/448 (44%), Gaps = 32/448 (7%) Query: 1 MLDI---------QWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRAR 50 MLDI + I +N E L ++R + + +++L + R ++ I + Sbjct: 1 MLDIADFVHGATPEKIAENQERLRENQRRRGAPVEAVDEVIALFKVARESRYEVTQIGEK 60 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 N +IG+ N L E + L++Q + E + ++ I N Sbjct: 61 INKVQKEIGRKKK--NKEDAADLIAEKTELEKQKKDADALATEKELLRDRKLASIGNYVH 118 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSRE---HFEIGEALGLMDFDRATKLSGARFSVL 167 +VP +N +I + + H ++ L D R TK+ G R L Sbjct: 119 ADVPTSQDEADNAIISTWAPEGFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGHRGYCL 178 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-- 225 + L AL + ++ YT P + + M T Q+ +F ++++ T+ Sbjct: 179 INYGLLLNLALVNYGLEF-LFSKKYTLNQPPYFMLKQYMAKTAQLEQFDEELYKVTENED 237 Query: 226 ----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 R+LI TSE L+ L+S E ++ LP+++ + +R EAGS G++ G+ R HQF Sbjct: 238 KASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQF 297 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E +T+ EDS+ E M+ +EE + L L YRVV + +G L +A + DLE W Sbjct: 298 EKIEQFVMTKPEDSWDAFEDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWF 357 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDP---------NSKSLKFTHTLNGSGVAVGRC 392 Q Y+E+ SCS C ++QSR + RYR + + H LN + A R Sbjct: 358 PSQGTYKELVSCSNCTDYQSRALEIRYRAKKDDEKDTRSDENKKVYVHALNATLCATERT 417 Query: 393 LIAILENYLNADGSVTIPTVLRPYMNNL 420 L ILENY G + +P VLR Y+ Sbjct: 418 LCCILENYQTETG-IIVPKVLRKYIPGQ 444 >gi|261190815|ref|XP_002621816.1| seryl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239590860|gb|EEQ73441.1| seryl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] Length = 487 Score = 305 bits (782), Expect = 6e-81, Method: Composition-based stats. Identities = 123/448 (27%), Positives = 200/448 (44%), Gaps = 32/448 (7%) Query: 1 MLDI---------QWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRAR 50 MLDI + I +N E L ++R + + +++L + R ++ I + Sbjct: 1 MLDIADFVHGATPEKIAENQERLRENQRRRGAPVEAVDEVIALFKVARESRYEVTQIGEK 60 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 N +IG+ N L E + L++Q + E + ++ I N Sbjct: 61 INKVQKEIGRKKK--NKEDAADLIAEKTELEKQKKDADALATEKELLRDRKLASIGNYVH 118 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSRE---HFEIGEALGLMDFDRATKLSGARFSVL 167 +VP +N +I + + H ++ L D R TK+ G R L Sbjct: 119 ADVPTSQDEADNAIISTWAPEGFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGHRGYCL 178 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-- 225 + L AL + ++ YT P + + M T Q+ +F ++++ T+ Sbjct: 179 INYGLLLNLALVNYGLEF-LFSKKYTLNQPPYFMLKQYMAKTAQLEQFDEELYKVTENED 237 Query: 226 ----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 R+LI TSE L+ L+S E ++ LP+++ + +R EAGS G++ G+ R HQF Sbjct: 238 KASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQF 297 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E +T+ EDS+ E M+ +EE + L L YRVV + +G L +A + DLE W Sbjct: 298 EKIEQFVMTKPEDSWDAFEDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWF 357 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDP---------NSKSLKFTHTLNGSGVAVGRC 392 Q Y+E+ SCS C ++QSR + RYR + + H LN + A R Sbjct: 358 PSQGTYKELVSCSNCTDYQSRALEIRYRAKKDDEKDTRSDENKKVYVHALNATLCATERT 417 Query: 393 LIAILENYLNADGSVTIPTVLRPYMNNL 420 L ILENY G + +P VLR Y+ Sbjct: 418 LCCILENYQTETG-IIVPKVLRKYIPGQ 444 >gi|311894343|dbj|BAJ26751.1| putative seryl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 420 Score = 305 bits (782), Expect = 7e-81, Method: Composition-based stats. Identities = 179/430 (41%), Positives = 244/430 (56%), Gaps = 16/430 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M ++ + PE + AL +R ++ + L L+ + + + A I Sbjct: 1 MHPLRDLLS-PEAV-TALARRGYRLDADSLAELAALRSRLVAERDALHA-------AIRI 51 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + E L+++ L + E L+ + +PN PLE VP G + Sbjct: 52 TTRRHRPATQEDA-AEGRDLRQRAGDLAAQLREAEQRLRDFLLAVPNTPLECVPPGRADE 110 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + +R G +P R+H +G G++D +RA ++SGARF+VL G A LERAL Sbjct: 111 AAVELRQWGARPEFGFAPRDHVALGAGSGILDLERAGRVSGARFAVLRGAGARLERALAS 170 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLT 237 F++DLHT EHGY E+S P LV E+M TGQ+PKFADD+F T +LIPT+EV L Sbjct: 171 FLLDLHTREHGYVEMSVPHLVTRESMTATGQLPKFADDLFGTRAAERELFLIPTAEVPLV 230 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+ E + S +LPL T FRSEAGS GRDTRG++R H+F K ELV + +D+ Sbjct: 231 NLFRGETLSSAALPLAVTAHTACFRSEAGSYGRDTRGVIRLHEFAKVELVRLCAAQDARH 290 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EHE +L AEE L+RL LHYRVV L TGDLGFSA +TYDLEVWL GQ YREISS S CG Sbjct: 291 EHEVLLGHAEEALRRLGLHYRVVELRTGDLGFSARRTYDLEVWLPGQQRYREISSVSDCG 350 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ RR + + + +F TLNGSG+ +GR + A+LE + DGSV +P L P+ Sbjct: 351 TFQGRRAGIKVKTAGAN--EFAATLNGSGLPIGRTMAALLEQFQREDGSVAVPAALVPHT 408 Query: 418 NNLAVIKKEH 427 VI + Sbjct: 409 -GFEVIAPDG 417 >gi|302415006|ref|XP_003005335.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261356404|gb|EEY18832.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 451 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 128/451 (28%), Positives = 213/451 (47%), Gaps = 30/451 (6%) Query: 1 MLD-IQWIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD + +I + +PE + + ++R + + +++L ++ R K+ A+ + Sbjct: 1 MLDALDFIAERGGDPEKIRESQRQRGDPVELVDEVIALWQEARSEQYKVTQFNAQIGAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IGQ N L+ + + L++Q E E L+ I N E VPI Sbjct: 61 KEIGQ--RRKNKVDDADLQVKKTDLQKQQKDQEAAAAEKQKELRNKTRIIGNYVHESVPI 118 Query: 116 GTSANENILIRSVGKKP---SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 + ++N +IR+ + + H ++ LG D R KL G R LTG Sbjct: 119 SNTEDDNKVIRTWKPEGRELKPFAAAVSHHDVLLKLGGYDPTRGVKLVGHRGYCLTGMGY 178 Query: 173 H----LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---- 224 Q+ I GYT P + + M T Q+ +F ++++ ++ Sbjct: 179 FLPTPFPMTPFQYEIQTKRPLAGYTPNQPPYFLDRDQMAKTAQLSQFDEELYRVSEGKST 238 Query: 225 ----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE L+ L++ E ++ LP+++ + FR EAG+ GRD G+ R HQ Sbjct: 239 DGSADKYLIATSEQPLSCLHADEWLQPGQLPIKYAGFSTCFRKEAGNHGRDAWGVFRVHQ 298 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E + + EDS+ + M++ +EE K L L Y+VVS+ +G L SA K +DLE + Sbjct: 299 FEKVEQFVLCKPEDSWKFFDEMIATSEEFYKSLGLPYQVVSIVSGALNNSAAKKFDLEAY 358 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK------SLKFTHTLNGSGVAVGRCLI 394 Q Y+E+ SCS C ++Q+R + RY +K ++ H LN + A R L Sbjct: 359 FPFQGEYKELVSCSNCTDYQTRELEIRYGVKKAKEAPGSGKKEYVHALNATLTAAERTLC 418 Query: 395 AILENYLNADGSVTIPTVLRPYMNNL-AVIK 424 +LENY A+G + +P VLR Y+ I Sbjct: 419 CVLENYQTAEG-LNVPEVLRKYIPGQPEFIP 448 >gi|17539260|ref|NP_501804.1| Seryl tRNA Synthetase family member (srs-2) [Caenorhabditis elegans] gi|2501055|sp|Q18678|SYSC_CAEEL RecName: Full=Probable seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|3875110|emb|CAA93105.1| C. elegans protein C47E12.1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 487 Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 127/471 (26%), Positives = 211/471 (44%), Gaps = 52/471 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NPE + + + R +P+ + ++ LDEK R + + ++N+ S Sbjct: 3 LDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAISK 62 Query: 57 QIGQAIAEG-----NLSLVDALKNETSTLK--------------------EQLPILEKEE 91 IG+ + + + S+ D + + LK E+ Sbjct: 63 AIGEKMKKKEPQGTDDSVADDIVARLAELKIDELSQLTVVQLKKLRVLVDEKSVQTAAAV 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 ++ + + I N+ V + N + R+ G + S + + Sbjct: 123 IANENARHEKLIQIGNLIHSSVVVSKDEANNKIERTFGDLSTKKKYSHVDLVV--MVDGF 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T ++G R L G L LE+A+ Q + + GY + P +R E M Q Sbjct: 181 DGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQR-LNVKGYVPLYTPFFMRKEVMQEVAQ 239 Query: 212 IPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F D+++ D ++LI TSE + + +E I+ LP+++ ++ Sbjct: 240 LSQFDDELYKVSSKGSEIAGDTSVDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E + D S+T + M+ AE + L + Y Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS--KS 375 +VV++ +G+L +A K +DLE W G YRE+ SCS C ++QSRR+ RY Sbjct: 360 QVVNIVSGELNNAAAKKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKKLSGE 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 + F H LN + A R + AILEN +G + +PT ++ +M N I Sbjct: 420 VPFVHMLNATMCATTRVICAILENNQTEEG-INVPTAIQQWMPENYRTFIP 469 >gi|46198828|ref|YP_004495.1| seryl-tRNA synthetase [Thermus thermophilus HB27] gi|47606770|sp|P34945|SYS_THET2 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|494615|pdb|1SRY|A Chain A, Refined Crystal Structure Of The Seryl-Trna Synthetase From Thermus Thermophilus At 2.5 Angstroms Resolution gi|494616|pdb|1SRY|B Chain B, Refined Crystal Structure Of The Seryl-Trna Synthetase From Thermus Thermophilus At 2.5 Angstroms Resolution gi|515247|pdb|1SER|A Chain A, The 2.9 Angstroms Crystal Structure Of T. Thermophilus Seryl-Trna Synthetase Complexed With Trna Ser gi|515248|pdb|1SER|B Chain B, The 2.9 Angstroms Crystal Structure Of T. Thermophilus Seryl-Trna Synthetase Complexed With Trna Ser gi|576267|pdb|1SES|A Chain A, Crystal Structures At 2.5 Angstroms Resolution Of Seryl- Trna Synthetase Complexed With Two Different Analogues Of Seryl-Adenylate gi|576268|pdb|1SES|B Chain B, Crystal Structures At 2.5 Angstroms Resolution Of Seryl- Trna Synthetase Complexed With Two Different Analogues Of Seryl-Adenylate gi|576269|pdb|1SET|A Chain A, Crystal Structures At 2.5 Angstroms Resolution Of Seryl- Trna Synthetase Complexed With Two Different Analogues Of Seryl-Adenylate gi|576270|pdb|1SET|B Chain B, Crystal Structures At 2.5 Angstroms Resolution Of Seryl- Trna Synthetase Complexed With Two Different Analogues Of Seryl-Adenylate gi|46196451|gb|AAS80868.1| seryl-tRNA synthetase [Thermus thermophilus HB27] Length = 421 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 233/428 (54%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +RQ PE A++++ + E +L+LD + + L K++++++ RN + ++ + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQVAKRVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E +AL L E+ LE+ E + L+ L+ +P P P+G Sbjct: 61 APPEEK----EALIARGKALGEEAKRLEEALREKEARLEALLLQVPLPPWPGAPVGGEEA 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + R VG P +H + E G + R +++SG+R L G LA E AL + Sbjct: 117 NREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RISQVSGSRSYALKGDLALYELALLR 174 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 F +D G+ ++ P R++A GTG P + D ++ +L T+EV L L Sbjct: 175 FAMDFMA-RRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNAL 233 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 +S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S Sbjct: 234 HSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDR 293 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS Sbjct: 294 AFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALL 353 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM Sbjct: 354 DWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM 412 Query: 418 NNLAVIKK 425 V++ Sbjct: 413 -GKEVLEP 419 >gi|628482|pir||S38948 serine-tRNA ligase (EC 6.1.1.11) - Thermus aquaticus Length = 421 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 146/428 (34%), Positives = 232/428 (54%), Gaps = 12/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +RQ PE A++++ + E +L+LD + + L K++++++ RN + ++ + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQVAKRVPK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E +AL L E+ LE+ E + L+ L+ +P P P+G Sbjct: 61 APPEEK----EALIARGKALGEEAKRLEEALREKEARLEALLLQVPLPPWPGAPVGGEEA 116 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + R VG P +H + E G + R +++SG+R L G LA E AL + Sbjct: 117 NREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RISQVSGSRSYALKGDLALYELALLR 174 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNL 239 F +D G+ ++ P R++A GTG P D ++ +L T+EV L L Sbjct: 175 FAMDFMA-RRGFLPMTLPSYAREKAFLGTGHFPATRDQVWAIAETDLYLTGTAEVVLNAL 233 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFT 297 +S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S Sbjct: 234 HSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDR 293 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS Sbjct: 294 AFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALL 353 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++Q+RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM Sbjct: 354 DWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM 412 Query: 418 NNLAVIKK 425 V++ Sbjct: 413 -GKEVLEP 419 >gi|330834196|ref|YP_004408924.1| seryl-tRNA synthetase [Metallosphaera cuprina Ar-4] gi|329566335|gb|AEB94440.1| seryl-tRNA synthetase [Metallosphaera cuprina Ar-4] Length = 441 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 144/439 (32%), Positives = 227/439 (51%), Gaps = 29/439 (6%) Query: 15 DIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 +L+KR ++P E + LD K R ++++ E +R N S+QI + AE ++ Sbjct: 3 IESLRKRGIDPTLAEKAVQLDRKWRSVLQEAEKLRHEHNVVSSQIPKLSAEERKKRIEEA 62 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 + + L EKE E+ L+ +PN+ E VP+G + N+ I+ GK Sbjct: 63 RALLAVL----DSKEKELKEIEEERDNLLRALPNLVHESVPVGPDDSYNVPIKVWGKFRV 118 Query: 134 A----------------------IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 + E+ L L + +A++++G+RF L + Sbjct: 119 YEKDLDGFLSQVNGLNAQYELIKFKPTPHADELENVLKLGNTVKASEVAGSRFYYLFDDI 178 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIP 230 +E+AL + ID T G++ V P ++R E + + F D ++ + +LI Sbjct: 179 VWIEQALIMYAIDTIT-SKGFSLVVPPYMLRGEVIQSVIDLDTFKDAIYKIEGEDLYLIA 237 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T+E + +L+ E IE++ LPL+F ++P+FR EAG+A +D +G+ R HQF K E + Sbjct: 238 TAEHPIASLFFKEEIEAERLPLKFVGISPAFRKEAGAANKDLKGIFRVHQFNKVEQFIFS 297 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 EDS+ H+ +L AE+I + L+L YRVV++ +GDLG A K YDLEVW+ Q +RE+ Sbjct: 298 LPEDSWKFHDELLYNAEQIFQGLELPYRVVNIASGDLGACAAKKYDLEVWMPAQAKFREM 357 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SCS C ++Q+ RM R+ D + HTLN + VA R + AILEN DGSV IP Sbjct: 358 VSCSNCTDWQAFRMKIRFVDRKKNRKGYVHTLNSTAVATTRAITAILENNQLEDGSVVIP 417 Query: 411 TVLRPYMNNLAVIKKEHIL 429 VLR Y+ K+ IL Sbjct: 418 RVLRSYLERFKNAPKDVIL 436 >gi|241068651|ref|XP_002408498.1| seryl-tRNA synthetase, putative [Ixodes scapularis] gi|215492486|gb|EEC02127.1| seryl-tRNA synthetase, putative [Ixodes scapularis] Length = 345 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 184/343 (53%), Positives = 242/343 (70%), Gaps = 2/343 (0%) Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 E+L LE++ + + L +PN+P EEVP G + N L+R+ G + + L+++H Sbjct: 1 EKLEELEQDLNNNNELNELLNM-LPNIPDEEVPYGIDESMNKLVRTYG-ETNPNALNKQH 58 Query: 142 FEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 FE+G L LMDF++ K+SGARF L G LA LERAL FMID+HT E + E+S P+LV Sbjct: 59 FELGTKLNLMDFEQTAKISGARFVTLKGDLAKLERALINFMIDVHTKEFDFFEISPPILV 118 Query: 202 RDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 RD AMY GQ+PKFA++ F TT+G LIPT+EVSL N+ + II + LP+R+ P F Sbjct: 119 RDNAMYNAGQLPKFAEESFATTNGYRLIPTAEVSLVNIVADTIIPREKLPMRYVAYTPCF 178 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVS 321 RSEAGS+ RDTRGM+R HQF K ELVSIT +E+S TEHE + + +E IL++L+L YRV+ Sbjct: 179 RSEAGSSSRDTRGMIRLHQFGKVELVSITTQEESKTEHEYITNASETILQKLNLPYRVML 238 Query: 322 LCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHT 381 LCTGD+GF+A KTYD+EVWL GQ YREI+SCS CG+FQ+RRM +RY++ S HT Sbjct: 239 LCTGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQARRMKARYKEFGSNETTLVHT 298 Query: 382 LNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 LN SG+ +GR ++AILENY N DGS+TIP VL YM L I Sbjct: 299 LNASGLPIGRTMVAILENYQNEDGSITIPDVLINYMGGLQKIT 341 >gi|294885387|ref|XP_002771305.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus ATCC 50983] gi|239874801|gb|EER03121.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus ATCC 50983] Length = 463 Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 129/446 (28%), Positives = 211/446 (47%), Gaps = 26/446 (5%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +D+ +R +PE + + +KR+ + LD++ R + ++ +R Sbjct: 3 IDVNRLRAEKGGDPEAVRASEQKRYRNSDTVGTAVKLDQQWRKDMFALDKLREELGKIQK 62 Query: 57 QIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 +I Q +G + L + ++++ EK EV S + I N+ L +VP Sbjct: 63 EITQKKKASKGKDPCTEEL-ARKAEGEKKIQEQEKLVAEVAKSRDAAVHSIGNIILPDVP 121 Query: 115 IGTSANENILIRSVGKKPSAI-----HLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 + + N + + G+ H +I LG MD +R + G R L G Sbjct: 122 VSNDEDNNEVYKKWGQPRQIFVDGKTPGHLYHHQIMYMLGAMDQERGINIVGHRGYFLRG 181 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----- 224 L AL + + L + GYT + P ++ + M T ++ F + ++ + Sbjct: 182 VGVLLNMALINYGMSL-LVKKGYTALQPPFFMKKDIMAETAELGDFDEQLYKKKEEKGLK 240 Query: 225 ----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 +LI TSE ++ + E I+ LPLR+ ++ FR EAGS G++T G+ R HQ Sbjct: 241 ENDGEYYLIATSEQPISAYHRKEWIDEDQLPLRYAGISTCFRKEAGSHGKETWGLYRIHQ 300 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E IT E+S HE ML +EE + LDL YRVV + +G L +A K YDLE W Sbjct: 301 FEKLEQFCITTPEESVAMHEHMLDMSEEFYQSLDLPYRVVKIVSGALNDAAAKKYDLEAW 360 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYR--DPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 G N+Y+E+ SCS C ++Q+R M +R + ++ H LN + A R + I+E Sbjct: 361 FPGYNMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTLCATERAMCCIVE 420 Query: 399 NYLNADGSVTIPTVLRPYMNNLAVIK 424 NY +G V +P VL PYM+ + + Sbjct: 421 NYQEEEG-VRVPRVLVPYMHGMEFLP 445 >gi|328794107|ref|XP_001123169.2| PREDICTED: seryl-tRNA synthetase-like, partial [Apis mellifera] Length = 258 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 139/258 (53%), Positives = 185/258 (71%), Gaps = 8/258 (3%) Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------TDGR 226 L RAL QFM+D HT +HGYTE P +V E + GTGQ+PKFA+DM+ T + Sbjct: 1 LHRALAQFMLDTHTQQHGYTEHYTPHIVNPEILLGTGQLPKFAEDMYKVSCGGEENTQEQ 60 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LI T+E++LTN I+ LP + T +P FRSEAGS G+DTRG++RQHQF K E+ Sbjct: 61 YLISTAEITLTNTVRERILSKDELPKKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEM 120 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 V I R E+S+ E M+ AE+IL+ L+L YRV+ LCTGD+GFSA KTYDLEVW+ QN Sbjct: 121 VQIQRPENSYAALEEMVGHAEKILQLLELPYRVIVLCTGDMGFSAAKTYDLEVWVPAQNT 180 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 YREISSCS C +FQ+RRM +R++D + K+ + HTLNGSG+AVGR L+A+LEN+ N DGS Sbjct: 181 YREISSCSNCEDFQARRMQARFKDNDGKN-QLVHTLNGSGLAVGRALVALLENHQNEDGS 239 Query: 407 VTIPTVLRPYMNNLAVIK 424 + IP L+PY+ L+V++ Sbjct: 240 INIPKALQPYLGGLSVLR 257 >gi|209876085|ref|XP_002139485.1| seryl-tRNA synthetase family protein [Cryptosporidium muris RN66] gi|209555091|gb|EEA05136.1| seryl-tRNA synthetase family protein [Cryptosporidium muris RN66] Length = 462 Score = 303 bits (776), Expect = 4e-80, Method: Composition-based stats. Identities = 135/445 (30%), Positives = 222/445 (49%), Gaps = 26/445 (5%) Query: 2 LDIQWIR----QNPEHLDIA-LKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 +DI IR + + + + + + R + E ++ +D++ R I K+E ++ N S Sbjct: 3 IDINRIRVEKGGDYDKIAESEMARYRGIGG-LEELVKIDQQWRKDIFKLEQVKKEVNVIS 61 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +I Q + + + L+ ++ LK ++ + EK EV + ++L + I N+ +VPI Sbjct: 62 KEIAQIKKKDAKANCEELQKKSMELKHEILLTEKRVLEVENRREELWNRIGNIVQPDVPI 121 Query: 116 GTSANENILIRSVGKKPSAI----HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 + ++N ++R G P+ I H E+ LG D + +++G R L Sbjct: 122 SNTEDDNKVLRRWGDIPNIIVDGTPGKMHHHEVMSRLGFYDSAKGAEIAGHRGYFLKQSG 181 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-------- 223 L AL + ++ + GY + PL ++ + M ++ F + ++ Sbjct: 182 VLLSMALVHYGMNF-LVKRGYIAIQPPLFMKRDLMAKAAELKDFEETLYHIPADMNNTKD 240 Query: 224 ---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 + +LI TSE L L+ + IE K LP+++ ++ FR EAG+ G+DT G+ R HQ Sbjct: 241 ADSNSLFLIATSEQPLAALHINTSIEQKDLPIKYAGISTCFRKEAGAHGKDTWGLFRVHQ 300 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E +T E+S HE M++ +EE + L L YRVVS+ +G L +A K YDLE W Sbjct: 301 FEKVEQFCVTTPEESNEMHEEMINISEEFYQSLGLPYRVVSIVSGALNDAAAKKYDLEAW 360 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK-FTHTLNGSGVAVGRCLIAILEN 399 G N YRE+ SCS C ++QSR + R K + H LNG+ AV R L I EN Sbjct: 361 FPGYNNYRELVSCSNCTDYQSRALECRMGFKKGDREKLYCHFLNGTLCAVQRTLCCIAEN 420 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIK 424 Y G + IP VL+PY+ + I Sbjct: 421 YQTTTG-LKIPAVLQPYL-GMDFIP 443 >gi|330842970|ref|XP_003293439.1| hypothetical protein DICPUDRAFT_8517 [Dictyostelium purpureum] gi|325076224|gb|EGC30028.1| hypothetical protein DICPUDRAFT_8517 [Dictyostelium purpureum] Length = 449 Score = 303 bits (775), Expect = 4e-80, Method: Composition-based stats. Identities = 136/443 (30%), Positives = 215/443 (48%), Gaps = 22/443 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 ++ Q+I+ N + + + R E ++ ++ RI+ K+++ R++RN ++Q+ Sbjct: 7 INFQFIKDNFKSIQENINIRKSGIDLESLIKNYDEYRIVKKELDFKRSKRNEIASQMKSL 66 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S L + +KE++ LEK+ ++ + + IPN E PIG ++ Sbjct: 67 LKNSPQSDRLQLVEQGKLVKEEVISLEKQHDKLFNHITLESLKIPNNTHPESPIGPESSA 126 Query: 122 NILI-RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 ++ + + ++H EIGE GL A+K +G ++ T A LE AL Sbjct: 127 RVIQLVNEKPNFGSDQKVKDHLEIGEECGL--IKSASKTTGHKYYYFTREAAMLEMALSF 184 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM--FCTTDGRWLIPTSEVSLTN 238 + + ++G+T V P L+ G G + D + L TSE+ L Sbjct: 185 WAFSKLSYKYGFTSVITPDLIHPNLAEGCGFHARSDADQLFWIKDRELCLSATSEIPLAG 244 Query: 239 LY-SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +Y +E I LP++ + FR E G G RG+ R HQF K E+ I+ E S Sbjct: 245 MYSHNEPIHENDLPIKMVGYSHCFRPEVGK-GAQNRGIYRVHQFSKVEMFVISTPEQSNQ 303 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E +L E+ L LH+RV+ + T DLG A K YD+EVW+ +N Y EISS S C Sbjct: 304 ILEDLLKIQLELFTDLGLHFRVLDMPTEDLGAPAFKKYDIEVWIPSKNDYGEISSASNCT 363 Query: 358 NFQSRRMNSRYR---------------DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 N+QS+R+N +Y + + + F HTLNG+ A+ R ++AILEN Sbjct: 364 NYQSKRLNIKYTNNNNNNNNNNIIDLDNDENSTQTFAHTLNGTACAIPRLILAILENNQQ 423 Query: 403 ADGSVTIPTVLRPYMNNLAVIKK 425 DGSV IP VLRP+MNN I Sbjct: 424 KDGSVLIPKVLRPFMNNQEYIYP 446 >gi|289619223|emb|CBI54190.1| unnamed protein product [Sordaria macrospora] Length = 477 Score = 302 bits (773), Expect = 7e-80, Method: Composition-based stats. Identities = 113/424 (26%), Positives = 193/424 (45%), Gaps = 26/424 (6%) Query: 10 NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 NPE + + +KR + + +++L E +R + A+ N QIG Sbjct: 39 NPEKIRESQRKRFAPVEAVDEVIALWEDHRKTAYSATQLNAKINEVQKQIGPKKK----- 93 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 + ++ + I N+ + VP+ + + N + RS Sbjct: 94 ----------AYTTHIRDNCSTTGCSNTTALVKVKTIGNLVHDSVPVSNNEDNNTVERSW 143 Query: 129 GKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 + + H E+ L D +R K+ G R L L +A+ + ++ Sbjct: 144 APEGVSFEKKDVLSHHEVLRKLDGYDPERGVKVVGHRGYFLKKWGVFLNQAIINYGLEF- 202 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR---WLIPTSEVSLTNLYSHE 243 SE YT + P L+ E M T Q+ +F ++++ T + +LI TSE ++ +S E Sbjct: 203 LSEREYTPLQTPQLMLREQMAKTAQLSQFDEELYKVTGDQADKYLIATSEQPISAFHSDE 262 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 +++K LPL++ + FR EAG+ G+D G+ R H+F K E +T E S+ + M+ Sbjct: 263 WLQAKDLPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKVEQFCVTEPEKSWEMFDHMI 322 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRR 363 S +E + L + YRVV++ +G L +A K DLE W Q ++E+ SCS C ++QSR Sbjct: 323 SNSEAFYQSLGIPYRVVAIVSGALNNAAAKKLDLEAWFPHQGEFKELVSCSNCTDYQSRD 382 Query: 364 MNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL- 420 + R+ + + H LN + A R + AILEN+ +G V +P LR Y+ Sbjct: 383 LEIRFGVKKQTDIKKTYVHCLNSTLTATTRTICAILENFQTPEG-VKVPEPLRKYLPGAP 441 Query: 421 AVIK 424 I Sbjct: 442 EFIP 445 >gi|326468899|gb|EGD92908.1| seryl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 473 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 119/440 (27%), Positives = 208/440 (47%), Gaps = 20/440 (4%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + +P+ + + ++R + + +++L E R + + ++ N+ Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSKINAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N L E + L+E+ +E + + + I N + VP+ Sbjct: 61 KEIG--MKKRNKEDASDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N ++R+ + H E+ L D +R K+ G R LTG+ Sbjct: 119 DKNEDNNTVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKVTESEDPSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E I K LP+++ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 IT+ E+S+ + M+ +EE K L + Y+V+++ +G L +A K DLE W Q Y Sbjct: 298 LITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRYRDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R ++ R+ + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILENYQQEDG 417 Query: 406 SVTIPTVLRPYM-NNLAVIK 424 + +P VLR Y+ N + Sbjct: 418 -IVVPEVLRKYIPGNPEFLP 436 >gi|324508480|gb|ADY43578.1| Seryl-tRNA synthetase [Ascaris suum] Length = 485 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 120/471 (25%), Positives = 215/471 (45%), Gaps = 52/471 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R+ NPE + + +KR+ + + ++ D+K R ++++ +N S Sbjct: 3 LDMDLFREEKGGNPELIRESQRKRYKDVTLVDRVIDCDQKWRKDRFAVDNLNRLKNVCSK 62 Query: 57 QIGQAIAEGNLSLVDA---------------------LKNETSTLK----EQLPILEKEE 91 +G+ + + + + L+ E++ ++E Sbjct: 63 AVGEKMKKKEPQGDEDNIPDGLLNGLDKLNAAALNDLSIAQIKRLRVIIDERMTETKREM 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 ++ + + + I N+ + VP+ + N + R+ G +A S + + Sbjct: 123 EKLELARNEALVQIGNILHDSVPVSDDEDNNRVERTFGNINAAKKYSHVDLIV--MVDGF 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T ++G R L G + LE+A+ + G+T + P +R E M Q Sbjct: 181 DGERGTVVAGGRGYFLKGAMVFLEQAVINLALQTLL-SKGFTALYTPFFMRKEVMQEVAQ 239 Query: 212 IPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F ++++ D ++LI TSE + + +E + LPL++ ++ Sbjct: 240 LSQFDEELYKVTGKGSEVVTDESIDEKYLIATSEQPIAAFHRNEWLNPSELPLKYAGIST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E + D S+ + M++ AEE + L+L Y Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKVEQFVLCSPHDGISWKMFDEMIANAEEFCQMLELPY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKS 375 R+V + +G+L +A K DLE W G +RE+ SCS C ++Q+RR+ R+ Sbjct: 360 RIVCIVSGELNNAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKVRFGQTKKMDGE 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL--AVIK 424 + F H LN + A R L AILEN+ DG + +P L+P+M + I Sbjct: 420 VPFVHMLNATMCATTRVLCAILENFQEEDG-IRVPKALKPFMPAVYAEKIP 469 >gi|296817321|ref|XP_002848997.1| seryl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238839450|gb|EEQ29112.1| seryl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 468 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 118/440 (26%), Positives = 207/440 (47%), Gaps = 25/440 (5%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 M+DI + +P+ + + ++R + + +++L E R + + ++ N+ Sbjct: 1 MIDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSKINAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N L + +TL+E+ +E + + + I N + VPI Sbjct: 61 KEIG--MKKRNKEDASDLLQQKATLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPI 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N+++R+ + + H E+ L D +R K+ G R LTG+ Sbjct: 119 DNNEDNNVVVRTWAPPDTKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKVTESEDPSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E I K LP + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWILEKELP-----INTCYRKEAGAHGKDAWGIFRVHQFEKIEQF 292 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 IT+ E+S+ + M+ +EE K L + Y+V+++ +G L +A K DLE W Q Y Sbjct: 293 LITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAWFPFQGEY 352 Query: 348 REISSCSTCGNFQSRRMNSRYRDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R ++ R+ + H LN + A R L ILENY DG Sbjct: 353 KELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILENYQQEDG 412 Query: 406 SVTIPTVLRPYM-NNLAVIK 424 + +P LR Y+ N + Sbjct: 413 -IVVPEALRKYIPGNPEFLP 431 >gi|156400967|ref|XP_001639063.1| predicted protein [Nematostella vectensis] gi|156226189|gb|EDO47000.1| predicted protein [Nematostella vectensis] Length = 507 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 122/459 (26%), Positives = 199/459 (43%), Gaps = 47/459 (10%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + KR+ + + ++ D + R ++ RN S Sbjct: 3 LDLDLYRADKGGNPDKIRENQSKRYSDVTLVDKVVEADTQWRKFRFSKDNWNKLRNLCSK 62 Query: 57 QIGQAIAEGNL------------SLVDALKNE------TSTLK-------EQLPILEKEE 91 QIG + + ++ L E + +K + + +E Sbjct: 63 QIGDKMKKKEPVGDDETLPKEVLDGLEELTAEMLQQLTVTQIKIVRTLVDDGMAKCNEEV 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 + + + + N+ + V I +EN + R VG S + + Sbjct: 123 ARLEKLRNEKLFEVGNILHDSVRISNDEDENPVDRIVGDCSVRKKYSHVDLVH--MVDGV 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D DR + ++G+R L G L LE AL Q G+ +S P +R E M Q Sbjct: 181 DIDRGSVVAGSRGYFLKGPLVFLEHALIQHAT-RMLYGKGFIPLSTPFFMRKEVMQEVAQ 239 Query: 212 IPKFADDMFCT---------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFR 262 + +F ++++ + ++LI TSE + + E ++ LP ++ + FR Sbjct: 240 LSQFDEELYKVVGKGADEAGYEEKYLIATSEQPIAAFHRGEWMDKNDLPKKYAGFSTCFR 299 Query: 263 SEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVV 320 EAG+ GRDTRG+ R HQF K E I S+ + M+ AEE K L + YR+V Sbjct: 300 QEAGAHGRDTRGIFRVHQFEKIEQFVICSPHDNISWEIFDEMIGNAEEFHKSLGIPYRIV 359 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKSLKF 378 S+ +G L +A K DLE W +RE+ SCS C ++Q+RR+ R+ S ++ Sbjct: 360 SIVSGALNNAAAKKLDLEAWFPASGAFRELVSCSNCTDYQARRLQVRFGQTKKMGVSTEY 419 Query: 379 THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 H LN + AV R + AILEN +G V +P L PY+ Sbjct: 420 VHMLNATMCAVSRVICAILENNQTEEG-VVMPQALHPYL 457 >gi|294953303|ref|XP_002787696.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus ATCC 50983] gi|239902720|gb|EER19492.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus ATCC 50983] Length = 470 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 131/453 (28%), Positives = 214/453 (47%), Gaps = 33/453 (7%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +DI +R +PE + + +KR+ + LD++ R + ++ +R Sbjct: 3 IDINKLRAEKGGDPEAVRASEQKRYRNSDTVGNAVELDQQWRKDMFALDKLREELGKIQK 62 Query: 57 QIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 +I Q +G + L + + ++++ EK EV S + I N+ L +VP Sbjct: 63 EITQKKKASKGKDPCTEELVRK-AEGEKKIQEQEKLVAEVAKSRDAAVHSIGNIILPDVP 121 Query: 115 IGTSANENILIRSVGKKPSA-----IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 +G + N + + G+ H +I LG MD +R + G R L G Sbjct: 122 VGNDEDNNEVYKKWGQPRQILVDGKTPGHLYHHQIMYMLGAMDQERGINIVGHRGYFLRG 181 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---- 225 L AL + + L + GYT + P ++ + M T ++ F + ++ ++ Sbjct: 182 VGVLLNMALINYGMSL-LVKKGYTALQPPFFMKKDIMAETAELGDFDEQLYKVSENSQQK 240 Query: 226 ------------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 +LI TSE ++ + E I+ LPLR+ ++ FR EAGS G++T Sbjct: 241 KEEKGLKENDGEYYLIATSEQPISAYHRKEWIDEDQLPLRYAGISTCFRKEAGSHGKETW 300 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 G+ R HQF K E IT E+S HE ML AEE + LDL YRVV + +G L +A K Sbjct: 301 GLYRIHQFEKLEQFCITTPEESVAMHEHMLDMAEEFYQSLDLPYRVVKIVSGALNDAAAK 360 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR--DPNSKSLKFTHTLNGSGVAVGR 391 YDLE W G N+Y+E+ SCS C ++Q+R M +R + ++ H LN + A R Sbjct: 361 KYDLEAWFPGYNMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTLCATER 420 Query: 392 CLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 + I+ENY +G V +P VL P+M+ + + Sbjct: 421 AMCCIVENYQEEEG-VRVPRVLVPFMHGMEFLP 452 >gi|254372616|ref|ZP_04988105.1| hypothetical protein FTCG_00180 [Francisella tularensis subsp. novicida GA99-3549] gi|151570343|gb|EDN35997.1| hypothetical protein FTCG_00180 [Francisella novicida GA99-3549] Length = 262 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 146/262 (55%), Positives = 190/262 (72%), Gaps = 2/262 (0%) Query: 165 SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-- 222 VL +A L RAL QFM+DLHT +HGY E+ P LV ++++YGTGQ+PKFA D+F Sbjct: 1 MVLKNKIAKLHRALSQFMLDLHTEKHGYEELYVPYLVNNDSLYGTGQLPKFAADLFKLEG 60 Query: 223 TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 LIPT+EV +TNL EI+++++LP +T P FRSEAGS GRDT+GM+RQHQF Sbjct: 61 DFEYSLIPTAEVPITNLVRDEILDTETLPRYYTAHTPCFRSEAGSYGRDTKGMIRQHQFE 120 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 K ELV IT + E + S AE++L++L+L YRV+ LCTGD+GFSA KTYDLEVWL Sbjct: 121 KVELVHITAADKGEESLELLTSHAEKVLQKLNLPYRVMKLCTGDMGFSAKKTYDLEVWLP 180 Query: 343 GQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 QN YREISSCS CG+FQ+RRM +R+++P+ K + HTLNGSG+AVGR L+AI+ENY Sbjct: 181 SQNTYREISSCSWCGDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIENYQQ 240 Query: 403 ADGSVTIPTVLRPYMNNLAVIK 424 DGS+ +P L YM ++VIK Sbjct: 241 EDGSIMVPDALIKYMGGISVIK 262 >gi|315049187|ref|XP_003173968.1| seryl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311341935|gb|EFR01138.1| seryl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 473 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 120/440 (27%), Positives = 208/440 (47%), Gaps = 20/440 (4%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + +P+ + + ++R + + +++L E R + + ++ N+ Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSKINAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N L E + L+E+ +E + + + I N + VPI Sbjct: 61 KEIG--MKKRNKEDATDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPI 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N ++R+ + H E+ L D +R K+ G R LTG+ Sbjct: 119 DKNEDNNTVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKVTESEDPSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E I K LP+++ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 IT+ E+S+ + M+ +EE K L + Y+V+++ +G L +A K DLE W Q Y Sbjct: 298 LITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRYRDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R ++ R+ + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILENYQQEDG 417 Query: 406 SVTIPTVLRPYM-NNLAVIK 424 + +P VLR Y+ N + Sbjct: 418 -IIVPEVLRKYIPGNPEFLP 436 >gi|126466244|ref|YP_001041353.1| seryl-tRNA synthetase [Staphylothermus marinus F1] gi|166223294|sp|A3DP85|SYS_STAMF RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|126015067|gb|ABN70445.1| seryl-tRNA synthetase [Staphylothermus marinus F1] Length = 459 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 136/440 (30%), Positives = 218/440 (49%), Gaps = 31/440 (7%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R+ PE L +KKR ++P + D + R + I+++R + N S +I + Sbjct: 6 LKLLREKPEELKEHVKKRFMDPSIVDEAYKTDLEWRRTLTYIQELRHKHNVVSREIPKLK 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + E L ++L +EK+ E+ +KL+ +PN+ E VP+G N Sbjct: 66 GVDK----EKKIKEAKQLLKELEEVEKKLKELEEKRQKLLFSLPNIVHETVPVGPDDTYN 121 Query: 123 ILIRSVGKKPSAIHLSREHFEIGEALGLM------------------------DFDRATK 158 + IR GK + E E G D +A + Sbjct: 122 VPIRFWGKPRVWKGFIDQFKEQTEKYGFKVEYEVIDWKPVGHADMLEKVLRLGDTFKAGQ 181 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 ++G+RF L + L+ AL + ID T GYT V P ++R + M G + F D Sbjct: 182 VAGSRFYYLFNDIVFLDMALLAYAIDYLT-SKGYTLVLPPYMLRHKVMMGVIDMDTFKDA 240 Query: 219 MFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 ++ + +LI T+E L L++ E I + LPL++ ++P FR EAG+ RD +G+ R Sbjct: 241 IYKIEGEDLYLIATAEHPLAALHAWEDIPEEELPLKYVGISPCFRKEAGAGNRDLKGIFR 300 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 HQF K E + EDS+ E ++S AE + + L + YR+V++ +GDLG A K YDL Sbjct: 301 VHQFHKVEQFVYAKPEDSWDIMEELISNAEHLFRGLGIPYRIVNIASGDLGAPAAKKYDL 360 Query: 338 EVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 E W+ Q YRE+ SCS ++Q+ R+ R ++ HTLN + +A R + AIL Sbjct: 361 EAWMPAQGRYREMVSCSNVTDWQAFRLRIRLIRRKGMVKEYLHTLNSTAIASTRTITAIL 420 Query: 398 ENYLNADGSVTIPTVLRPYM 417 EN+ DG+V +P VLR Y+ Sbjct: 421 ENFQEPDGTVIVPKVLRKYL 440 >gi|327301447|ref|XP_003235416.1| seryl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326462768|gb|EGD88221.1| seryl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 473 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 120/440 (27%), Positives = 208/440 (47%), Gaps = 20/440 (4%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + +P+ + + ++R + + +++L E R + + +R N+ Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSRINAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N L E + L+E+ +E + + + I N + VP+ Sbjct: 61 KEIG--MKKRNKEDATDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N ++R+ + H E+ L D +R K+ G R LTG+ Sbjct: 119 DKNEDNNAVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKVTESEDPSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E I K LP+++ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 IT+ E+S+ + M+ +EE K L + Y+V+++ +G L +A K DLE W Q Y Sbjct: 298 LITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRYRDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R ++ R+ + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILENYQQEDG 417 Query: 406 SVTIPTVLRPYM-NNLAVIK 424 + +P VLR Y+ N + Sbjct: 418 -IIVPEVLRKYIPGNPEFLP 436 >gi|326480121|gb|EGE04131.1| seryl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 435 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 118/434 (27%), Positives = 206/434 (47%), Gaps = 19/434 (4%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + +P+ + + ++R + + +++L E R + + ++ N+ Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSKINAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N L E + L+E+ +E + + + I N + VP+ Sbjct: 61 KEIG--MKKRNKEDASDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N ++R+ + H E+ L D +R K+ G R LTG+ Sbjct: 119 DKNEDNNTVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKVTESEDPSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E I K LP+++ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKIEQF 297 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 IT+ E+S+ + M+ +EE K L + Y+V+++ +G L +A K DLE W Q Y Sbjct: 298 LITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAWFPFQGEY 357 Query: 348 REISSCSTCGNFQSRRMNSRYRDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R ++ R+ + H LN + A R L ILENY DG Sbjct: 358 KELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILENYQQEDG 417 Query: 406 SVTIPTVLRPYMNN 419 + +P VLR Y+ Sbjct: 418 -IVVPEVLRKYIPG 430 >gi|308481089|ref|XP_003102750.1| CRE-SARS-2 protein [Caenorhabditis remanei] gi|308260836|gb|EFP04789.1| CRE-SARS-2 protein [Caenorhabditis remanei] Length = 487 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 125/471 (26%), Positives = 214/471 (45%), Gaps = 52/471 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R+ NPE + + + R+ + + ++ DEK R +++ ++N+ S Sbjct: 3 LDIDMFRKEKGGNPEVIRKSQRDRYKDVTLVDQVIEFDEKWRKDRFIADELNRQKNAISK 62 Query: 57 QIGQAIAEG-----NLSLVDALKNETSTLK--------------------EQLPILEKEE 91 IG+ + + + ++ D + + LK E+ Sbjct: 63 AIGEKMKKKEPQGTDDAVADDIVARLTDLKLDELSKLTVVQLKKLRVLVDEKSAETAAAV 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 ++ + + I N+ E V + + + N + R+ G + S + + Sbjct: 123 VAHETARHEKLIQIGNLLHESVVVSDNEDNNKVERTFGDLTTRKKYSHVDLVV--MVDGF 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T ++GAR L G L LE+A+ Q + + GYT + P +R E M Q Sbjct: 181 DGERGTVVAGARGYFLKGPLVFLEQAIIQLALQR-LNVKGYTPLYTPFFMRKEVMQEVAQ 239 Query: 212 IPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F D+++ D ++LI TSE + + +E I+ LP+++ ++ Sbjct: 240 LSQFDDELYKVSSKGSEVAGDTSIDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E + D S+ + M+ AE + L + Y Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWKLFDEMIGNAESYYQELQIPY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKS 375 VV++ +G+L +A K +DLE W G RE+ SCS C ++QSRR+ RY + Sbjct: 360 HVVNIVSGELNNAAAKKFDLEAWFPGSGAMRELVSCSNCLDYQSRRLKVRYGQTKKLNGE 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 + F H LN + A R + AILEN +G + +PT ++ +M N I Sbjct: 420 VPFVHMLNATMCATTRVICAILENNQTEEG-INVPTAIQQWMPENYRTFIP 469 >gi|47205013|emb|CAF89013.1| unnamed protein product [Tetraodon nigroviridis] Length = 515 Score = 300 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 118/461 (25%), Positives = 202/461 (43%), Gaps = 48/461 (10%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + PE + + +KR + + +++ D + R +++ +N S Sbjct: 3 LDLDLFRTDKGGDPEIVRESQRKRFKDVTLVDKLVAADTEWRKCRFTADNLNKAKNLCSR 62 Query: 57 QIGQAIAEGNL-----------SLVDALKNE------TSTLK-------EQLPILEKEEH 92 IG+ + ++AL E S +K E + + E Sbjct: 63 SIGEKMKRKEAVGEDQSVPEAAQDLEALTAETLSSLSVSQIKQVRLLVDEAIGRTDGERL 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 + + + + I N+ VPI + + + + H ++ + D Sbjct: 123 RLEAERFEHLREIGNLLHPSVPISNDEDADNKVER-TWGDCCVQKKYSHVDLVVMIDGFD 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL + + Y+ + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGPLVFLEQALINYAL-RMLHAKSYSMLYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + E ++ + LP+R+ + Sbjct: 241 SQFDEELYKVIGKGSEKSEDSSIDEKYLIATSEQPIAAFLRDEWLKPEDLPIRYAGFSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E D S+ E M+ AEE + L + YR Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWQMFEEMIGTAEEFYQSLGIPYR 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR++ RY Sbjct: 361 IVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLHIRYGQTKKMMDKA 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +F H LN + A R + AILENY +G + +P LR +M Sbjct: 421 EFVHMLNATMCATTRVMCAILENYQTEEG-IVVPETLREFM 460 >gi|119182668|ref|XP_001242456.1| hypothetical protein CIMG_06352 [Coccidioides immitis RS] Length = 465 Score = 300 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 116/440 (26%), Positives = 208/440 (47%), Gaps = 28/440 (6%) Query: 1 MLDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + + P+ + + ++R + + ++SL E R + I ++ N+ Sbjct: 1 MLDIADLIADRGGDPKKVKESQRRRFASEELVDEVISLYEDARRTRYEASQIGSKINALQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N L + + L++ E E + + I N + VPI Sbjct: 61 KEIG--MKKKNKEDASELLAQKAKLEQDKKAQEDLAVEKEKLRDRKLKTIGNYVHDSVPI 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + ++N +I++ + + + H E+ L D +R K+ G R LTG+ Sbjct: 119 SNNEDDNAIIKTWAPEGAKVEKRDCLSHHEVLTRLDGYDPERGVKIVGHRGFCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RW 227 L AL + ++ GY P + + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPFFMLRDYMAKTAQLEQFDEELYKVTENEDKSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E ++ K LP+++ + FR EAGS G+D G+ + Sbjct: 238 LIATSEQPLSALHDGEWLQDKELPIKYAGYSTCFRKEAGSHGKDAWGIF--------QQF 289 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T+ E+S+ + M++ +EE + L L Y++VS+ +G L +A K +DLE W Q Y Sbjct: 290 ILTKPEESWKTFDDMITTSEEFYQSLGLPYQIVSIVSGALNNAASKKWDLEAWFPFQGEY 349 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++QSR ++ R+ + + H LN + A R L ILENY DG Sbjct: 350 KELVSCSNCTDYQSRELDIRFGPKKTTDTKKAYVHALNATLCATERALCCILENYQQEDG 409 Query: 406 SVTIPTVLRPYMNNL-AVIK 424 + +P VLR Y+ + Sbjct: 410 -IIVPEVLRKYIPGQPEFLP 428 >gi|302520443|ref|ZP_07272785.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Streptomyces sp. SPB78] gi|302429338|gb|EFL01154.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Streptomyces sp. SPB78] Length = 348 Score = 300 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 132/344 (38%), Positives = 197/344 (57%), Gaps = 6/344 (1%) Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN--ILIRSVGKKPSAIHLSREHF 142 + E+ + + + L+ + N+ +VP+G + ++ + ++H Sbjct: 1 KAADAEQSDAAAQTQDLLRRLGNLVHPDVPVGGEEDFALLETHGTIRDFEAEGFAPKDHL 60 Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 E+G LG +D +RA K+SG+RF L+G A LE AL I + G+T + P LVR Sbjct: 61 ELGHLLGAIDVERAAKVSGSRFYYLSGIGALLELALVNAAIAQ-ATAAGFTPMLTPALVR 119 Query: 203 DEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 +AM GTG + + D++ D +L+ TSEV+L + EIIE+ LPLR+ +P F Sbjct: 120 PQAMDGTGFLGQAGQDVYHLKDDDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCF 179 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVS 321 R EAGS G+DTRG+ R HQF K E+ + EDS EH R+L ++ L L L +RV+ Sbjct: 180 RREAGSHGKDTRGIFRVHQFDKVEMFTYVAPEDSEAEHRRLLEWEKQWLTSLGLPFRVID 239 Query: 322 LCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHT 381 + TGDLG SA + +D E W+ Q YRE++S S C FQ+RR++ R RD K + T Sbjct: 240 VATGDLGSSAARKFDCEAWIPTQGKYRELTSTSDCTEFQARRLSIRMRD--GKKTRPLAT 297 Query: 382 LNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 LNG+ AV R ++A+LEN+ ADGSV +P VLRPY+ V++ Sbjct: 298 LNGTLCAVPRTIVALLENHQQADGSVRVPEVLRPYLGGREVLEP 341 >gi|294896376|ref|XP_002775526.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus ATCC 50983] gi|239881749|gb|EER07342.1| seryl-tRNA synthetase, cytoplasmic, putative [Perkinsus marinus ATCC 50983] Length = 470 Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 129/453 (28%), Positives = 212/453 (46%), Gaps = 33/453 (7%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +D+ +R +PE + + +KR+ + LD++ R + ++ +R Sbjct: 3 IDVNRLRAEKGGDPEAVRASEQKRYRNSDTVGTAVKLDQQWRKDMFALDKLREELGKIQK 62 Query: 57 QIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 +I Q +G + L + ++++ EK EV S + I N+ L +VP Sbjct: 63 EITQKKKASKGKDPCTEEL-ARKAEGEKKIQEQEKLVAEVAKSRDAAVHSIGNIILPDVP 121 Query: 115 IGTSANENILIRSVGKKPSAI-----HLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 + + N + + G+ H +I LG MD +R + G R L G Sbjct: 122 VSNDEDNNEVYKKWGQPRQIFVDGKTPGHLYHHQIMYMLGAMDQERGINIVGHRGYFLRG 181 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---- 225 L AL + + L + GYT + P ++ + M T ++ F + ++ ++ Sbjct: 182 VGVLLNMALINYGMSL-LVKKGYTALQPPFFMKKDIMAETAELGDFDEQLYKVSENSQQK 240 Query: 226 ------------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 +LI TSE ++ + E I+ LPLR+ ++ FR EAGS G++T Sbjct: 241 KEEKGLKENDGEYYLIATSEQPISAYHRKEWIDEDQLPLRYAGISTCFRKEAGSHGKETW 300 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 G+ R HQF K E IT E+S HE ML +EE + LDL YRVV + +G L +A K Sbjct: 301 GLYRIHQFEKLEQFCITTPEESVAMHEHMLDMSEEFYQSLDLPYRVVKIVSGALNDAAAK 360 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR--DPNSKSLKFTHTLNGSGVAVGR 391 YDLE W G N+Y+E+ SCS C ++Q+R M +R + ++ H LN + A R Sbjct: 361 KYDLEAWFPGYNMYKELVSCSNCTDYQARAMETRCGHVKQGEREKRYVHMLNSTLCATER 420 Query: 392 CLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 + I+ENY +G V +P VL PYM+ + + Sbjct: 421 AMCCIVENYQEEEG-VRVPRVLVPYMHGMEFLP 452 >gi|226294398|gb|EEH49818.1| seryl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 488 Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 125/461 (27%), Positives = 208/461 (45%), Gaps = 35/461 (7%) Query: 1 MLDI---------QWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRAR 50 MLDI + I ++ E L ++R + + +++L + R ++ I + Sbjct: 1 MLDIADFVHGPTPEKISESQERLRENQRRRGAPVEAVDEVVALFKIAREARYEVTQIGEK 60 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 N +IG+ + N V L E L +Q + E + + I N Sbjct: 61 INKVQKEIGKK--KKNKEDVSDLIAEKVELGKQKKDADALATEKELLRDQKLRTIGNYVH 118 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSR---EHFEIGEALGLMDFDRATKLSGARFSVL 167 E+VP + ++N ++ S + H +I L D R TK+ G R L Sbjct: 119 EDVPTSQNEDDNAILSSWAPEGFKEEKPAFCLSHDDILHRLDGFDQKRGTKIFGHRGYCL 178 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-- 225 + L AL + ++ + YT P + + M T Q+ +F ++++ T+ Sbjct: 179 INYGLLLNLALVNYGLEF-LFKKKYTLNQPPYFMLKQFMAKTAQLEQFDEELYKVTENED 237 Query: 226 ----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 R+LI TSE L+ L+S E + LP+++ + +R EAGS G++ G+ R HQF Sbjct: 238 KASERYLIATSEQPLSALHSGEWLHDTDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQF 297 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E IT+ EDS+ + M+ +EE + L L YRVV + +G L +A + DLE W Sbjct: 298 EKIEQFVITKPEDSWDSFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWF 357 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDP----------NSKSLKFTHTLNGSGVAVGR 391 Q Y+E+ SCS C ++QSR + RYR + + H LN + A R Sbjct: 358 PSQGTYKELVSCSNCTDYQSRALEIRYRAKKDSADEKDCSDENKKTYVHALNATLCATER 417 Query: 392 CLIAILENYLNADGSVTIPTVLRPYMNNL--AVIKKEHILE 430 L +LENY G + +P VLR Y+ ++ + ++E Sbjct: 418 TLCCLLENYQTETG-IIVPEVLRKYIPGQPTEILYTKDLVE 457 >gi|225562259|gb|EEH10539.1| seryl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 489 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 121/450 (26%), Positives = 199/450 (44%), Gaps = 34/450 (7%) Query: 1 MLD---------IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRAR 50 MLD + I +N E L ++R + + +++L + R + I + Sbjct: 1 MLDVADFVHGATPEKITENRERLKENQRRRGAPVEAIDEVIALFKAAREARYDVTQIGEK 60 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 N +IG+ N L E + L++Q + E + ++ I N Sbjct: 61 INKVQKEIGKKKK--NKEDAADLIAEKTELEKQKKDADAAATEKELLRDRKLASIGNYVH 118 Query: 111 EEVPIGTSANENILIRSV---GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 E+VP +N ++ + K H ++ L D R TK+ G R L Sbjct: 119 EDVPTSQDEADNAILSTWAPEWFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGHRGYCL 178 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-- 225 + L AL + ++ YT P + + M T Q+ +F ++++ T+ Sbjct: 179 INYGLLLNLALVNYGLEF-LFRKKYTLNQPPYFMLKQFMAKTAQLEQFDEELYKVTENED 237 Query: 226 ----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 R+LI TSE L+ L+S E ++ LP+++ + +R EAGS G++ G+ R HQF Sbjct: 238 KASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQF 297 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E +T+ EDS+ + M+ +EE + L L YRVV + +G L +A + DLE W Sbjct: 298 EKIEQFVMTKPEDSWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWF 357 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDP-----------NSKSLKFTHTLNGSGVAVG 390 Q Y+E+ SCS C ++Q+R + RYR + + H LN + A Sbjct: 358 PSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKKIYVHALNATLCATE 417 Query: 391 RCLIAILENYLNADGSVTIPTVLRPYMNNL 420 R L ILENY G + +P VLR Y+ Sbjct: 418 RTLCCILENYQTETG-IIVPEVLRKYIPGQ 446 >gi|321471906|gb|EFX82878.1| hypothetical protein DAPPUDRAFT_187913 [Daphnia pulex] Length = 490 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 125/463 (26%), Positives = 205/463 (44%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R + PE + +KR+ + + + I+ D + R L +++ + +NS S Sbjct: 3 LDIDLFRADKGGDPEKMRENQRKRYKDVKLVDLIVEKDNQWRQLRFQLDQLNKLKNSASK 62 Query: 57 QIGQAIAEGNL-------SLVDALKNETSTLKEQLPI-------------------LEKE 90 +IG+ + + ++ + S EQL K+ Sbjct: 63 EIGEKMKKKEPVGDDVLPDGLEEIMASMSLTGEQLKPLTVNQIKKVSSMMDKAIVEANKK 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N + + +EN++ R+ G S S + Sbjct: 123 LDDTEKERNAGLREMGNHLHPSCHVSDNEDENVVERTFGDCASRKKYSHVDLIH--MVEG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 MD +R T +G R L G + LE+AL Q + + Y + P +R + M Sbjct: 181 MDAERGTVTAGGRGYYLLGPMVFLEQALIQLALRI-LQTKSYIAMGTPFFMRKDIMQDVA 239 Query: 211 QIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F D+++ D ++LI TSE + + E ++ LP R+ ++ Sbjct: 240 QLSQFDDELYKVIGKGSEKAEDKEVDEKYLIATSEQPIAAFHRDEWMKESELPKRYAGIS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E IT D S+ + M+ AE + L++ Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFQKVEQFCITSPHDNLSWQMMDEMIGNAEAFYQALNIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SK 374 YR+V++ +G L +A K DLE W G +RE+ SCS C ++QSRR+ RY + Sbjct: 360 YRIVNIVSGALNNAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLIRYGQTKKMNA 419 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE A G + IP VL+P+M Sbjct: 420 TTDYVHMLNATMCATTRVICAILELNQTATG-IVIPEVLKPFM 461 >gi|331213133|ref|XP_003319248.1| seryl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309298238|gb|EFP74829.1| seryl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 465 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 128/430 (29%), Positives = 208/430 (48%), Gaps = 18/430 (4%) Query: 10 NPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 NPE + + +KR E + +L+L + ++ ++R N+ +IG+A Sbjct: 29 NPELVKTSQRKRGGEKAAELVDEVLALYTSWTKVGFQLREVRTEANAIKKKIGEAKKAKK 88 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + L L E++ LEKEE + S LK S I N+ E V + + ++N++++ Sbjct: 89 EPEPE-LWTSKEQLDEKIKQLEKEEADAESLLKTRASSIGNIVHESVHVSMTEDDNVILK 147 Query: 127 SVGKKPSAIHLSR----EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFM 182 + +P+ R H + L ++D +R K++G R L L +A+ + Sbjct: 148 TWNPEPNKPFEKRAELLSHDVVMHRLDMVDLERGAKVAGHRGFFLINDGVDLNQAMINYG 207 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTN 238 +D G+ + AP ++R M T Q+ +F + ++ D ++LI TSE L+ Sbjct: 208 LDF-LRNKGFRKTMAPFMMRKGLMAKTAQLEEFDEALYRLSGDGEDDKYLIATSEQPLSA 266 Query: 239 LYSHEIIESK--SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +S E E LPL++ + FR EAGS GRDT G+ R HQF K E IT S+ Sbjct: 267 YHSDEWFEKPKEQLPLKYAGYSTCFRKEAGSHGRDTWGIFRVHQFEKVEQFCITDPSKSW 326 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E M+ +E+ + L L YR+V + +G L +A K DLE W ++E+ S S C Sbjct: 327 EMFEEMVQNSEDFYQSLGLGYRLVGIVSGALNNAAAKKADLEAWFPSMGEFKELVSVSNC 386 Query: 357 GNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 ++QSR + R + + H LNG+ A R L ++ENY +G + IPTVLR Sbjct: 387 TDYQSRSLEVRCGVKKQGDTQKVYVHMLNGTLCATERALCCLVENYQTPEG-LLIPTVLR 445 Query: 415 PYMNNLAVIK 424 PYM + Sbjct: 446 PYMQGREFLP 455 >gi|238060458|ref|ZP_04605167.1| seryl-tRNA synthetase [Micromonospora sp. ATCC 39149] gi|237882269|gb|EEP71097.1| seryl-tRNA synthetase [Micromonospora sp. ATCC 39149] Length = 428 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 150/423 (35%), Positives = 223/423 (52%), Gaps = 16/423 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS----EYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD++ IR++ E + AL KR + + I LD++ R LI +I+ R RR + + Sbjct: 1 MLDMELIRKDREAVATALAKRLDPAEVNRALDEIQRLDQERRALITEIDAERQRRKAEAR 60 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 A G+ A + E L E LE + EV S L+ + +PN+P ++V G Sbjct: 61 AYAAAKRAGSAPESVAPEAERKQLVE----LESQLDEVQSRLRDRMGELPNLPADDVVPG 116 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++ + AI R+H E+ LGL+D +R KL G+ F + TG A LE Sbjct: 117 GKEANRVVRAF--GERPAIEKVRDHVELSRMLGLVDHERGVKLGGSGFWMYTGLGARLEW 174 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----RWLIPT 231 AL ++ID + GY + P L+ D A + GQ PKF DD++ ++L+PT Sbjct: 175 ALLNWLIDQNI-AAGYDFLLPPHLLLDTAGFAAGQFPKFYDDVYHLDRESAPRGQFLLPT 233 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +E ++ Y EI+++ +LPLR P +R EA + D RG +R HQF K E+ T Sbjct: 234 AETAILGAYQDEILDTATLPLRRFAYTPCYRREAAGSHSDERGTVRGHQFNKVEIFQFTL 293 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E + E+M++ E ++ RL LH++ L GD S KT D+EVW+ Y+E+S Sbjct: 294 PEQADAALEQMVTHVEGLVARLGLHHQTSLLSAGDASASMKKTLDIEVWMPSTGKYKEVS 353 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S S G++Q+RR RYR+ K +F HTLNGS +A R AILE + DGSV +P Sbjct: 354 SVSWAGDYQARRAAIRYREAGGKQTRFVHTLNGSALATSRLFPAILEQFQQPDGSVLVPE 413 Query: 412 VLR 414 VLR Sbjct: 414 VLR 416 >gi|325967919|ref|YP_004244111.1| seryl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] gi|323707122|gb|ADY00609.1| seryl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] Length = 468 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 130/455 (28%), Positives = 214/455 (47%), Gaps = 38/455 (8%) Query: 4 IQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 + +R P+ + +L+KR ++ + + LD K R L +I+++R + N + ++ + Sbjct: 6 LDALRNRPDTVRDSLRKRRMDVGIVDRFIELDNKWRSLKAEIDELRHKHNVITREVSKLK 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + + E L ++ E+E + +K++ IPN+ E VP + Sbjct: 66 G----TEREGKIKEAKELLNEIQKKEEELENIEREREKVLRSIPNLVHESVPYDCPGGID 121 Query: 123 ILIRSVGKKPSAI----------------HLSREHFEIGE---------ALGLMDFDRAT 157 + P ++ E + LG+ D +A Sbjct: 122 SIPARFYGTPKVWIGHAKEFKDQTERFGFNVPYETIDWKPIGHADMLEVVLGMGDTLKAG 181 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 +++G+RF L L L+ AL + ID T + G+ V P +++ E + + F D Sbjct: 182 EVAGSRFYYLFDDLVMLDMALLTYAIDYMT-KKGFKLVLPPYMLKYEVLSEILDMDTFKD 240 Query: 218 DMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LI T+E + H + LPL F ++PSFR EA + RD +G+ Sbjct: 241 MVYKVENEDLYLIGTAEHPIAAYLRHTELLEDQLPLLFVGVSPSFRREASAGNRDMKGIF 300 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E + EDS+ HE ++ AEE+ + L L YRVV LC D+G A K YD Sbjct: 301 RVHQFHKVEQFVFSLPEDSWRWHEELIRNAEELWQGLGLPYRVVLLCAHDMGRCAAKQYD 360 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 LEVW+ Q +YRE+ SCS C ++QS ++ R + +F HTLN + +A R + AI Sbjct: 361 LEVWMPAQGMYREMVSCSNCTDWQSAKLGIRVLRKD-MRREFVHTLNSTAIASTRTITAI 419 Query: 397 LENYLNADGSVTIPTVLRPYM-----NNLAVIKKE 426 LENY DG+V IP LR Y+ + I + Sbjct: 420 LENYQEPDGTVVIPKALRRYLEIFSKGPIDAIYPK 454 >gi|307596091|ref|YP_003902408.1| seryl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] gi|307551292|gb|ADN51357.1| seryl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] Length = 468 Score = 298 bits (764), Expect = 8e-79, Method: Composition-based stats. Identities = 129/441 (29%), Positives = 211/441 (47%), Gaps = 33/441 (7%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 + +R P+ + +L+KR ++ + + LD K R L +I+++R R N + ++ + Sbjct: 6 LDALRNRPDIVRDSLRKRRMDISIVDKFIELDNKWRSLKAEIDELRHRHNVITKEVSKLS 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + + E L ++ EKE + ++++ IPN+ E VP + Sbjct: 66 G----AEREKKIMEAKELLSEIQKKEKELDSIEKERERVLRSIPNLVHESVPYNCPEGVD 121 Query: 123 ILIRSVGKKPSAI----------------HLSREHFEIGE---------ALGLMDFDRAT 157 + P ++ E + LG+ D +A Sbjct: 122 SIPIRFYGTPKVWVGHIKEFKDQTERFGFNVPYETIDWKPIGHADMLEIVLGMGDTLKAG 181 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 +++G+RF L L L+ AL + ID T + G+ V P +++ E + + F D Sbjct: 182 EVAGSRFYYLFDDLVMLDMALIAYAIDYMT-KKGFRLVLPPYMLKYEVLSEILDMETFKD 240 Query: 218 DMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LI T+E + + LPL F ++PSFR EA + RD +G+ Sbjct: 241 MVYKVENEDLYLIGTAEHPIAAYLRRMELLEDQLPLLFVGVSPSFRREASAGNRDMKGIF 300 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E + E+S+ HE ++ AEE+ + L L YRVV LC D+G A K YD Sbjct: 301 RVHQFHKVEQFVFSLPEESWRWHEELIRNAEELWQGLGLPYRVVVLCAHDMGRCAAKQYD 360 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 LEVW+ Q +YRE+ SCS C ++QS ++ R + +F HTLN + +A R + AI Sbjct: 361 LEVWMPAQGMYREMVSCSNCTDWQSAKLGIRVLRRD-MRREFVHTLNSTAIASTRAITAI 419 Query: 397 LENYLNADGSVTIPTVLRPYM 417 LENY DG+V IP VLR Y+ Sbjct: 420 LENYQEPDGTVVIPKVLRKYL 440 >gi|268537226|ref|XP_002633749.1| C. briggsae CBR-SRS-2 protein [Caenorhabditis briggsae] gi|187036656|emb|CAP24333.1| CBR-SARS-1 protein [Caenorhabditis briggsae AF16] Length = 487 Score = 298 bits (764), Expect = 9e-79, Method: Composition-based stats. Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 50/462 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NP+ + + + R+ + + ++ DEK R + + ++N+ S Sbjct: 3 LDIDLFRVERGGNPDVIRKSQRDRYKDVTLVDQVIEWDEKWRKEKFLADRLNRQKNAISK 62 Query: 57 QIGQAIAEG-----NLSLVDALKNETSTLK--------------------EQLPILEKEE 91 IG+ + + + S+ + + + LK E+ Sbjct: 63 AIGEKMKKKEPQGNDDSVAEDIVARLAELKLDELSTLTVVQLKKLRLLVDEKSVETAAAA 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 ++ + + I N+ + V + + N + R+ G + S + + Sbjct: 123 VAHETARHEKLIQIGNLLHDSVVVSDKEDNNKVERTFGDLTTRKKYSHVDLVV--MVDGF 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T ++G R L G L LE+A+ Q + + GYT + P +R E M Q Sbjct: 181 DGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQR-LNLKGYTPLYTPFFMRKEVMQEVAQ 239 Query: 212 IPKFADDMFC------------TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F D+++ T D ++LI TSE + + +E I+ LP+++ ++ Sbjct: 240 LSQFDDELYKVSSKGSEVAGDTTVDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E + D S+T + M+ AE + L + Y Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKS 375 VV++ +G+L +A K +DLE W G RE+ SCS C ++QSRR+ RY + Sbjct: 360 HVVNIVSGELNNAAAKKFDLEAWFPGSGAMRELVSCSNCLDYQSRRLKVRYGQTKKLNGE 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + F H LN + A R + AILEN +G + +PT ++ +M Sbjct: 420 VPFVHMLNATMCATTRVICAILENNQTEEG-INVPTAIQQWM 460 >gi|198432935|ref|XP_002127248.1| PREDICTED: similar to Seryl-aminoacyl-tRNA synthetase [Ciona intestinalis] Length = 506 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 119/459 (25%), Positives = 204/459 (44%), Gaps = 46/459 (10%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R+ NPE + KR+ + + + ++ D + R +++ ++N S Sbjct: 3 LDLDLFRKDKGGNPEKIRENQSKRYKDVKLVDNLVEADTEWRKCRYSLDNFNKQKNQCSK 62 Query: 57 QIGQAIAEGNL--------SLVDALKNETSTL----------------KEQLPILEKEEH 92 IG + + L+ T+ + +E ++ Sbjct: 63 AIGLKMKKKEPIGEDDTLPEDFPPLEEITNEVLANLTVCQIKKVRLLVEEATTKCDQRRI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 E+ K + I N VP+ + + I + H ++ + + Sbjct: 123 ELEGIRLKNLREIGNHLHSSVPVSNDEDADNRIERTIGDCTTRKK-YSHVDLVVMVDGYE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 +R ++G+R L G L LE+AL F + + +GY + P +R E M Q+ Sbjct: 182 GERGAVVAGSRGYFLKGPLVFLEQALINFALQR-LANNGYVPLYTPYFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F D+++ TD ++LI TSE + L+ E +E + LP+++ + Sbjct: 241 SQFDDELYKVVGKSSEKAEDGGTDEKYLIATSEQPIAALHRDEWLEPEKLPIKYAGFSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 FR E GS GRDTRG+ R HQF K E + E S+ + M++ AE K L + Y +V Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKVEQFVYSSPETSWQHFDEMIATAEGFYKDLGIPYHIV 360 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS--KSLKF 378 + +G L +A K DLE W G +RE+ SCS C ++Q+RR+ R+ + + + Sbjct: 361 CIVSGALNHAAAKKLDLEAWFPGSGAHRELVSCSNCLDYQARRLKVRFGQTKKMMEKVDY 420 Query: 379 THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 H LN + A R + AILENY +G + IP VL+ +M Sbjct: 421 VHMLNATMCATTRVICAILENYQTEEG-IVIPEVLKSFM 458 >gi|219128753|ref|XP_002184570.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404020|gb|EEC43969.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 462 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 125/444 (28%), Positives = 199/444 (44%), Gaps = 27/444 (6%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +DI +R +P +++R +P + +L+ D R L I+ IR N Sbjct: 3 IDINELRDYKGGDPAKWRRHMEQRFKDPSIVDQVLARDADWRELRSTIDQIRKDVNKLQK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 ++ + D + + ++ + E + + L+ I NV EVPI Sbjct: 63 EVIAPKKKAREPCDDEV-AQMKAMQVDIKDKEAQLPIAAAERDALLYKIGNVVDPEVPIS 121 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + + L V H E+ +G + R ++G R LT L + Sbjct: 122 KDEDADNL---VLAYTLPGSKPLTHDELLWRIGGYEPVRGQNVAGHRAYFLTNAGVMLNQ 178 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRW 227 A+ + I S GY + P + E M G Q+ F + ++ + ++ Sbjct: 179 AIINYSIAF-LSARGYNVLQPPFFMNKEVMAGIAQLEDFDEQLYKVSGKTDDPDGATEKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE + + + I+ K+LPLR+ ++ FR EAGS+G+D RG+ R HQF K E Sbjct: 238 LIATSEQPICAYHKGDWIDPKTLPLRYAGISTCFRKEAGSSGKDIRGIFRVHQFEKVEQF 297 Query: 288 S--ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + E S E +RML A++ + L + YRVV L +G+L +A K YDLE W GQN Sbjct: 298 CLTVDDFEISQAEQKRMLQAAKDFYESLGVGYRVVCLVSGELNDAAVKKYDLEGWFPGQN 357 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSK-----SLKFTHTLNGSGVAVGRCLIAILENY 400 YRE+ SCS C ++Q+R + R + + H LN + A GR + +LE Y Sbjct: 358 TYRELVSCSNCTDYQARGVGVRCGNKTKSMDLTARASYVHMLNSTLCATGRGICCLLETY 417 Query: 401 LNADGSVTIPTVLRPYMNNLAVIK 424 G V +P VLRP+M + Sbjct: 418 QTETG-VVVPEVLRPFMGGTDFMP 440 >gi|47498044|ref|NP_998852.1| seryl-tRNA synthetase [Xenopus (Silurana) tropicalis] gi|45708834|gb|AAH67920.1| seryl-aminoacyl-tRNA synthetase 1 [Xenopus (Silurana) tropicalis] gi|89269852|emb|CAJ83597.1| seryl-tRNA synthetase [Xenopus (Silurana) tropicalis] Length = 511 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 128/469 (27%), Positives = 213/469 (45%), Gaps = 48/469 (10%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R+ NPE + +KR +P + +L+ D R + +++ ++N S Sbjct: 3 LDLDLFREDKGGNPELIRETQRKRFKDPGLVDALLNSDTAWRKCRFQADNLNKQKNLCSK 62 Query: 57 QIGQAIAEGN----------LSLVDALKNET------STLK-------EQLPILEKEEHE 93 IG+ + + +D L E + +K E + + E + Sbjct: 63 IIGEKMKKKEPLGDSDVLPENIQLDQLTAEVLSALSVTQIKRLRVLIDEAIAATDTERIK 122 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 + + + + I N+ VPI + + + H ++ + + Sbjct: 123 LEAERFESLREIGNLLHPTVPISNDEDNDNKVERTWGDCEVRKR-YSHVDLVVMVDGFEG 181 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 ++ ++G+R L G L LE+AL QF + +E YT + P +R E M Q+ Sbjct: 182 EKGAVVAGSRGYFLKGPLVFLEQALIQFALHT-LAEKQYTPIYTPFFMRKEVMQEVAQLS 240 Query: 214 KFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 +F ++++ D ++LI TSE + L+ E ++ + LPLR+ ++ F Sbjct: 241 QFDEELYKVIGKGSEKSDDNSIDEKYLIATSEQPIAALHRDEWLKPEELPLRYAGISTCF 300 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHYRV 319 R E GS GRDTRG+ R HQF K E D S+ E M+ AE ++L + YR+ Sbjct: 301 RQEVGSHGRDTRGIFRVHQFEKIEQFIYASPNDNKSWELFEEMIMTAESFYQKLGIPYRI 360 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLK 377 V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY ++ Sbjct: 361 VNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVE 420 Query: 378 FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM-NNLAVIKK 425 F H LN + A R + AILENY +G + IP LR +M L I K Sbjct: 421 FVHMLNATMCATTRAICAILENYQTEEG-IIIPEKLRDFMPPGLNYIIK 468 >gi|19074152|ref|NP_584758.1| SERYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] gi|74697584|sp|Q8SS48|SYS_ENCCU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|19068794|emb|CAD25262.1| SERYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] Length = 429 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 131/427 (30%), Positives = 200/427 (46%), Gaps = 13/427 (3%) Query: 1 MLDIQWIRQNP---EHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 M+DI IR +P E + + KKR + LD K + +++ I R N + Sbjct: 1 MIDINLIR-DPKTREKVVESEKKRFRDGLAVGKAYELDRKRIEMNFRLDQINTRINQLNR 59 Query: 57 QIGQAIAEGNLSLVDALKNETSTLK---EQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 +I +G L + + +K ++ L + V L K++ I N+ V Sbjct: 60 EIKSGYRQGKNKEDGDLSEKVAEIKGLSDEAKGLRDDVKAVEDELNKVMKGIGNIISPSV 119 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + +N ++RS + R + K+ G R L+G +A Sbjct: 120 VVSNDEKDNPIVRSYRSSRNMQKNPRPFCVL--MKDFTHSVAGAKVMGHRGYYLSGKMAR 177 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSE 233 L +AL ++ ID GYT + P+++R + M T Q+ F D ++ D +LI TSE Sbjct: 178 LAQALTRYAIDF-LENKGYTYIQTPVMLRRDVMRKTSQLSDFDDQLYKVEDDLYLIATSE 236 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 SL LY E + + +P +F + FR EAG+ G+D G+ R HQF K E I E Sbjct: 237 QSLAALYMDERMVPQEVPKKFCGQSLCFRKEAGAHGKDNAGLFRVHQFEKIEQFVICGPE 296 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S HE M+ EE + LD+ Y VV + +G+L +A YDLE + YRE+ SC Sbjct: 297 ESQKYHEEMIKACEEFYQSLDISYNVVGIVSGELNDAAAIKYDLEAYFPSAEKYRELVSC 356 Query: 354 STCGNFQSRRMNSRYRDPNSKSLK-FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C ++QSR + RY + K + H LNG+ AV R L I+ENY DG + IP V Sbjct: 357 SNCTDYQSRELEIRYGVVKENNRKIYVHLLNGTMCAVQRALCCIVENYQTGDG-IAIPDV 415 Query: 413 LRPYMNN 419 L+ Y Sbjct: 416 LQGYFGG 422 >gi|320100908|ref|YP_004176500.1| seryl-tRNA synthetase [Desulfurococcus mucosus DSM 2162] gi|319753260|gb|ADV65018.1| seryl-tRNA synthetase [Desulfurococcus mucosus DSM 2162] Length = 459 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 141/449 (31%), Positives = 224/449 (49%), Gaps = 31/449 (6%) Query: 6 WIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 +R+NPE L +KKR ++P + LD + R ++ +++++R R N S I + Sbjct: 8 LLRENPEQLKEHVKKRFMDPSLVDEAYRLDLEWRKMLSQVQELRHRHNVISRDISRLP-- 65 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 NE L QL LEK+ E+ + + +PN E VPIG N+ Sbjct: 66 --EPERSLRINEAKELLSQLEELEKKLRELEELRDEALLKLPNTVHESVPIGPDDTYNVP 123 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLM------------------------DFDRATKLS 160 IR G + + E G D +A +++ Sbjct: 124 IRFWGTPKVWTGHLEQFKQQTERYGFKVDYKLIEWRPVGHADMLENVLRLGDTVKAGEVA 183 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G+RF L + L+ AL + ID T GY V P ++R + M G + F D ++ Sbjct: 184 GSRFYYLFDDIVFLDMALLMYAIDSLT-SKGYRLVLPPYMLRHKVMSGVIDLATFKDAIY 242 Query: 221 CTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +LI T+E SL L++ E I + LPL++ ++P FR EAG+ RD +G+ R H Sbjct: 243 KIEGEDLYLIATAEHSLAALHAFEEIPEEELPLKYVGVSPCFRKEAGAGNRDLKGIFRVH 302 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 QF K E + E+S++ E ++ AEE+ + L+L YR+V++ +GDLG A K YDLE Sbjct: 303 QFHKVEQYVYAKPEESWSLMEELIGNAEELFRGLELPYRIVNIASGDLGAPAAKKYDLET 362 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ Q L+RE+ SCS ++QS R+ +R ++ HTLN + +A R + +ILEN Sbjct: 363 WMPAQGLFREMVSCSNTTDWQSFRLKTRLIRRRGMIKEYVHTLNSTAIASTRAITSILEN 422 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 + N DG+VTIP LR Y+ + +++I Sbjct: 423 HQNEDGTVTIPKALRKYLEVFSKAPRDYI 451 >gi|71421977|ref|XP_811974.1| seryl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70876700|gb|EAN90123.1| seryl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 477 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 127/464 (27%), Positives = 211/464 (45%), Gaps = 44/464 (9%) Query: 2 LDIQWIRQNP--EHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD+Q R + + + ++R +P + +L +D+ R + N+ S + Sbjct: 3 LDVQLFRDEKGADIIRESQRRRFADPTIVDAVLEVDKSWRRTQFMTDAYNKLINTCSKLV 62 Query: 59 GQAIAEGNLSL---------------------------VDALKNETSTLKEQLPILEKEE 91 G E V LK + L EQ+ +L KE Sbjct: 63 GAKKKEKEADGDTSDIPESIRAACKEGELAPDQLKGLCVLQLKQLSKDLSEQVSVLAKEA 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 E+ + L+ + N+ E VP+ + ++ H I E LG+M Sbjct: 123 AELVAKRDGLVLSVGNIIHESVPVAQDEDTGNVVVR-TFGDVTKRAKLNHVTIMERLGMM 181 Query: 152 DF-DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D T ++G R VL G L L+ AL + ++ GYT + P + +AM Sbjct: 182 DTTKTVTSMAGGRAYVLKGGLVQLQLALLSYGMNF-LVSRGYTPLYPPFFLNKDAMSEVA 240 Query: 211 QIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 Q+ +F ++++ T + ++LI TSE+ + + + PL++ ++ FR EAG+ Sbjct: 241 QLSQFDEELYKVTGDGEEKYLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGA 300 Query: 268 AGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GRDT G+ R HQF K E + E+S+ E M+ +EE + L L YR +++C+G Sbjct: 301 HGRDTLGIFRVHQFDKLEQFLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSG 360 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD-----PNSKSLKFTH 380 L +A K YD+E W +RE+ SCS C ++Q+R +N R+ + ++ H Sbjct: 361 ALNNAAAKKYDVEAWFPASGAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCH 420 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 LNG+ A+ R + I ENY +G V +P VLRPYM L ++K Sbjct: 421 MLNGTLCAITRTMCCICENYQTEEG-VVVPDVLRPYMMGLEMLK 463 >gi|297527069|ref|YP_003669093.1| seryl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] gi|297255985|gb|ADI32194.1| seryl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] Length = 459 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 137/440 (31%), Positives = 218/440 (49%), Gaps = 31/440 (7%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R+ PE L +KKR ++P + D + R + I+++R + N S +I + Sbjct: 6 LKLLREKPEELKKHVKKRFMDPSIVDEAYKTDLEWRRTLTYIQELRHKHNIASREIPRLK 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + E L ++L +EK+ E+ KL+ +PN+ E VPIG N Sbjct: 66 G----PDKEKKIKEARQLLKELEKVEKKLKELEEKRLKLLFSLPNIVHETVPIGPDDTYN 121 Query: 123 ILIRSVGKKPSAIHLSREHFEIGEALGLM------------------------DFDRATK 158 + IR GK + + E E G D +A + Sbjct: 122 VPIRFWGKPKVWEGFTDQFKEQTEKYGFKVEYEVIDWKPVGHADMLEKVLMLGDTFKAGQ 181 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 ++G+RF L + L+ AL + ID T GYT V P ++R + M G + F D Sbjct: 182 VAGSRFYYLFNDIVFLDMALLAYAIDYLT-SKGYTLVLPPYMLRHKVMMGVIDMDTFKDA 240 Query: 219 MFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 ++ + +LI T+E L L++ E I + LPL++ ++P FR EAG+ RD +G+ R Sbjct: 241 IYKIEGEDLYLIATAEHPLAALHAWEDIPEEKLPLKYAGISPCFRKEAGAGNRDLKGIFR 300 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 HQF K E + EDS+ E ++S AE + + L + YR+V++ +GDLG A K YDL Sbjct: 301 VHQFHKVEQFVYAKPEDSWNIMEELISNAEHLFQGLGIPYRIVNIASGDLGAPAAKKYDL 360 Query: 338 EVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 E W+ Q YRE+ SCS ++Q+ R+ R ++ HTLN + +A R + AIL Sbjct: 361 EAWMPAQGRYREMVSCSNVTDWQAFRLRIRLIRRKGMVKEYLHTLNSTAIASTRTITAIL 420 Query: 398 ENYLNADGSVTIPTVLRPYM 417 EN+ DG+V +P VLR Y+ Sbjct: 421 ENFQEPDGTVIVPKVLRKYL 440 >gi|295657633|ref|XP_002789383.1| seryl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226283867|gb|EEH39433.1| seryl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 488 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 124/461 (26%), Positives = 209/461 (45%), Gaps = 35/461 (7%) Query: 1 MLDI---------QWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRAR 50 MLDI + I ++ E L ++R + + +++L + R ++ I + Sbjct: 1 MLDIADFVHGPTPEKIAESQERLRENQRRRGASVEAVDEVVALFKIARETRYEVTQIGEK 60 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 N +IG+ + N L E L++Q + E + + I N Sbjct: 61 INKVQKEIGKK--KKNKEDASDLIAEKVELEKQKKDADALATEKELLRDQKLRTIGNYVH 118 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSR---EHFEIGEALGLMDFDRATKLSGARFSVL 167 E+VP + ++N ++ S + H +I L +D R TK+ G R L Sbjct: 119 EDVPTSQNEDDNAILSSWAPEGFKEEKPAFCLSHDDILHRLDGLDQKRGTKIFGHRGYCL 178 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-- 225 + L AL + ++ + YT P + + M T Q+ +F ++++ T+ Sbjct: 179 INYGLLLNLALVNYGLEF-LFKKKYTLNQPPYFMLKQFMAKTAQLEQFDEELYKVTENED 237 Query: 226 ----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 R+LI TSE L+ L+S E + LP+++ + +R EAGS G++ G+ R HQF Sbjct: 238 KASERYLIATSEQPLSALHSGEWLHDTDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQF 297 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E IT+ EDS+ + M+ +EE + L L YRVV + +G L +A + DLE W Sbjct: 298 EKIEQFVITKPEDSWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWF 357 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDP----------NSKSLKFTHTLNGSGVAVGR 391 Q Y+E+ SCS C ++QSR + RYR + + H LN + A R Sbjct: 358 PSQGTYKELVSCSNCTDYQSRALEIRYRAKKDSADEKDCSDENKKTYVHALNATLCATER 417 Query: 392 CLIAILENYLNADGSVTIPTVLRPYMNNL--AVIKKEHILE 430 L +LENY G + +P VLR Y+ ++ + ++E Sbjct: 418 TLCCLLENYQTETG-IIVPEVLRKYIPGQPTEILYTKDLVE 457 >gi|207346845|gb|EDZ73214.1| YDR023Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 437 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 126/427 (29%), Positives = 195/427 (45%), Gaps = 25/427 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + NPE + + K R+ + + I+S + +++++ + N Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG N L E L +Q L ++E + LKK + + N+ V + Sbjct: 61 KDIGLKFK--NKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSR----------EHFEIGEALGLMDFDRATKLSGARFS 165 N L+R+ + H EI L D DR K+ G R Sbjct: 119 SNDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGY 178 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 + L +AL + + + GY + AP+++ E M T Q+ +F ++++ D Sbjct: 179 FFRNYGVFLNQALINYGLQF-LAAKGYIPLQAPVMMNKELMSKTAQLSEFDEELYKVIDG 237 Query: 225 --GRWLIPTSEVSLTNLYSHEIIESKS--LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 ++LI TSE ++ +S E E LP+ + + FR EAGS G+D G+ R H Sbjct: 238 EDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHA 297 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E IT E S+ E E+M+S +EE K L L YR+V + +G+L +A K YDLE W Sbjct: 298 FEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++QSR + R + + K+ H LN + A R L ILE Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILE 417 Query: 399 NYLNADG 405 NY DG Sbjct: 418 NYQTEDG 424 >gi|290560564|pdb|3LSQ|A Chain A, Trypanosoma Brucei Seryl-Trna Synthetase gi|290560565|pdb|3LSQ|B Chain B, Trypanosoma Brucei Seryl-Trna Synthetase gi|290560566|pdb|3LSS|A Chain A, Trypanosoma Brucei Seryl-Trna Synthetase In Complex With Atp gi|290560567|pdb|3LSS|B Chain B, Trypanosoma Brucei Seryl-Trna Synthetase In Complex With Atp Length = 484 Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 137/470 (29%), Positives = 213/470 (45%), Gaps = 44/470 (9%) Query: 2 LDIQWIRQNP--EHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA-- 56 LDIQ R + + ++R +P + I+ D+K R E + N S Sbjct: 8 LDIQLFRDETGANIIRESQRRRFADPDIVDAIIEADKKWRRTQFLTEASKKLINICSKAV 67 Query: 57 ------------------QIGQAIAEG--NLSLVDAL-----KNETSTLKEQLPILEKEE 91 Q+ +A G V+ L K + L +Q+ L KE Sbjct: 68 GAKKKAKEADGDTSEIPPQVKEAYENGTLKGEQVEQLCVLQLKQLSKDLSDQVAGLAKEA 127 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 ++ KL+ + N+ E VPI + + H I E LG+M Sbjct: 128 QQLEEERDKLMLNVGNILHESVPIAQDEETGNTVVRTFGNTTKRAK-LNHVSIMERLGMM 186 Query: 152 DF-DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D T ++G R VL G L L+ AL + +D + GYT P + + M Sbjct: 187 DTSKAVTSMAGGRSYVLKGGLVQLQVALVSYSLDF-LVKRGYTPFYPPFFLNRDVMGEVA 245 Query: 211 QIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 Q+ +F ++++ + D ++LI TSE+ + + PL++ ++ FR EAG+ Sbjct: 246 QLSQFDEELYQVSGDGDKKYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGA 305 Query: 268 AGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GRDT G+ R HQF K E + E+S+ E M++ +EE K L L YRVV++C+G Sbjct: 306 HGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSG 365 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD-----PNSKSLKFTH 380 L +A K YDLE W +RE+ SCS C ++QS+ +N RY ++ H Sbjct: 366 ALNNAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLRGTAAQNVKEYCH 425 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHILE 430 LNG+ A+ R + I ENY +G V IP VLRPYM + +I+ E+ + Sbjct: 426 MLNGTLCAITRTMCCICENYQTEEG-VVIPDVLRPYMMGIEMIRFENNAQ 474 >gi|29828836|ref|NP_823470.1| seryl-tRNA synthetase [Streptomyces avermitilis MA-4680] gi|46577432|sp|Q82KS8|SYS2_STRAW RecName: Full=Seryl-tRNA synthetase 2; AltName: Full=Serine--tRNA ligase 2; Short=SerRS 2; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase 2 gi|29605941|dbj|BAC70005.1| putative seryl-tRNA synthetase [Streptomyces avermitilis MA-4680] Length = 427 Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 177/428 (41%), Positives = 242/428 (56%), Gaps = 10/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D + ++ L +R + + + ++ +R N S G Sbjct: 1 MHDPSELLEDGPAAVRRLARRRYDLDLAALEKAVRRRSEAQAEVTRLRTELNRTSRARG- 59 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G S + K L+ + E L +L+ IPNVPL+ VP G + Sbjct: 60 --RSGPPSEEE--KEAARALRADVQQAEATARTAGHDLTELLLGIPNVPLDSVPDGDTDQ 115 Query: 121 ENILIRSVGKKPSA-IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 E + +R G+ P +R H +IGE+LG++D A KLSG+RFSV G A LERAL Sbjct: 116 EAVEVRRWGRPPHDAGTDARHHSDIGESLGILDGPAAAKLSGSRFSVGRGAGARLERALA 175 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 F +DLHT EHGYTE S P LV + M GTGQ+PKF DD+F T +LIPT+EV L Sbjct: 176 DFFLDLHTGEHGYTEYSVPFLVNRDTMTGTGQLPKFEDDLFRTQVGDRELFLIPTAEVPL 235 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL + +++++++LP FT P FR+EAG+ GRDTRG+LR HQF K ELV + ED+ Sbjct: 236 TNLVAQQLLDARALPYAFTARTPCFRAEAGAYGRDTRGILRLHQFEKVELVRVCAPEDAP 295 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + E M+ AEE L+RL+L YRVV L GDLGFSA TYD+EVWL G + YREISS S C Sbjct: 296 AQLELMVGHAEECLRRLELSYRVVQLPAGDLGFSARMTYDIEVWLPGSDAYREISSVSDC 355 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G FQ+RR + R++ + + TLNGS + +GR + A+LE + DGSV +P L PY Sbjct: 356 GTFQARRADIRHKRADGRKA-PAATLNGSALPIGRTVAALLEQGVREDGSVLLPEALVPY 414 Query: 417 MNNLAVIK 424 ++ Sbjct: 415 TGFRRILP 422 >gi|66827607|ref|XP_647158.1| seryl-tRNA synthetase [Dictyostelium discoideum AX4] gi|60475320|gb|EAL73255.1| seryl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 525 Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 49/470 (10%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D Q+I+ N + + KR + E ++ ++ RI+ K+++ RA+RN ++++ Sbjct: 55 IDFQFIKDNENQIKENIIKRKSPVELEKLIKNYDEYRIIKKELDTFRAKRNEIASKMKLM 114 Query: 62 IA---EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + E N + L + +KE L LE++ + + IPN VPIG Sbjct: 115 MKGGGESNKNDRLELVEQGKQVKEDLIALEEKHDIYFNEITSEALKIPNNTHPSVPIGAE 174 Query: 119 ANENILIR--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 +N NI+ ++H E+GE+LG+ A+K +G ++ T A LE Sbjct: 175 SNANIIKMVGEKPNYLKPDEPIKDHLELGESLGV--IRSASKTTGHKYYYFTREGAMLEM 232 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM--FCTTDGRWLIPTSEV 234 AL + T ++G+ V P L+ G + D + L TSE+ Sbjct: 233 ALSYWAFSKLTYKYGFQSVITPDLIHPNLAEACGFHARSDADQLFWIKDRDLCLSATSEI 292 Query: 235 SLTNLY-SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 L +Y + E ++S LP++ + FR EAG G +G+ R HQF K E+ I++ Sbjct: 293 PLAGMYANEEPLQSAELPIKMVGYSHCFRPEAG-RGLQNKGIYRVHQFSKVEMFIISKPH 351 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S E +L E+ L LH+RV+ + + DLG A + YD+EVW+ + Y EISS Sbjct: 352 ESNEILEELLKIQIELFSELGLHFRVLDMPSEDLGAPAYRKYDIEVWIPSKQEYGEISSA 411 Query: 354 STCGNFQSRRMNSRYRDPNS--------------------------------------KS 375 S C ++QS+R+N +Y+ Sbjct: 412 SNCTDYQSKRLNIKYQSTKDDFQIQQFVENNYKIIPSPQILNDDNNNNSNNNNEIDNSIP 471 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 FTHTLNG+ A+ R ++AILEN +DGSV IP VL+P+MNN VI Sbjct: 472 PLFTHTLNGTACAIPRLILAILENNQQSDGSVLIPKVLQPFMNNQKVILP 521 >gi|322825689|gb|EFZ30575.1| seryl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 477 Score = 296 bits (757), Expect = 6e-78, Method: Composition-based stats. Identities = 127/464 (27%), Positives = 210/464 (45%), Gaps = 44/464 (9%) Query: 2 LDIQWIRQNP--EHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD+Q R + + + ++R + + +L +D+ R + N+ S + Sbjct: 3 LDVQLFRDEKGADIIRESQRRRFADSTIVDAVLEVDKSWRRTQFMTDAYNKLINTCSKLV 62 Query: 59 GQAIAEGNLSL---------------------------VDALKNETSTLKEQLPILEKEE 91 G E V LK + L EQ+ +L KE Sbjct: 63 GAKKKEKEADGDTSDIPESIRAACKEGELAPDQLKGLCVLQLKQLSKDLSEQVSVLAKEA 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 E+ + L+ + N+ E VP+ + ++ H I E LG+M Sbjct: 123 AELVAKRDGLVLSVGNIIHESVPVAQDEDTGNVVVR-TFGDVTKRAKLNHVTIMERLGMM 181 Query: 152 DF-DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D T ++G R VL G L L+ AL + ++ GYT + P + +AM Sbjct: 182 DTTKTVTSMAGGRAYVLKGGLVQLQLALLSYGMNF-LVSRGYTPLYPPFFLNKDAMSEVA 240 Query: 211 QIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 Q+ +F ++++ T + ++LI TSE+ + + + PL++ ++ FR EAG+ Sbjct: 241 QLSQFDEELYKVTGDGEEKYLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGA 300 Query: 268 AGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GRDT G+ R HQF K E + E+S+ E M+ +EE + L L YR +++C+G Sbjct: 301 HGRDTLGIFRVHQFDKLEQFLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSG 360 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD-----PNSKSLKFTH 380 L +A K YD+E W +RE+ SCS C ++Q+R +N R+ + ++ H Sbjct: 361 ALNNAAAKKYDVEAWFPASGAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCH 420 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 LNG+ A+ R + I ENY +G V IP VLRPYM L ++K Sbjct: 421 MLNGTLCAITRTMCCICENYQTEEG-VVIPDVLRPYMMGLEMLK 463 >gi|162660624|gb|EDQ48461.1| predicted protein [Physcomitrella patens subsp. patens] Length = 315 Score = 295 bits (756), Expect = 7e-78, Method: Composition-based stats. Identities = 155/317 (48%), Positives = 205/317 (64%), Gaps = 14/317 (4%) Query: 101 LISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLS 160 ++ +PN+P + VP+G + N+ R G + ++H ++G+ LG +DFD KLS Sbjct: 1 MLLAVPNLPHDSVPVGADESGNVEARRWGTPKTFDFEVKDHVDVGQPLG-LDFDMGVKLS 59 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G+RF+V+ G +A L RAL QFMIDL T HGYTE P V +++ GTGQ+PKF D+F Sbjct: 60 GSRFTVMKGPIARLHRALAQFMIDLQTDSHGYTECYVPYAVNADSLKGTGQLPKFEGDLF 119 Query: 221 ------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 +LIPT+EV LTN ++ LP++ T +P FRSEAGS Sbjct: 120 AAKKGGQDGEPVPDNAALYLIPTAEVPLTNFVRDVVVAEDQLPIKLTAHSPCFRSEAGSY 179 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 GRDTRGM+RQHQF K E+V I E S+ E M AE +L++L L YRV+SLCTGD+G Sbjct: 180 GRDTRGMIRQHQFDKVEMVQIVHPEKSYEALEEMTGHAEAVLQKLGLPYRVMSLCTGDMG 239 Query: 329 FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVA 388 F A KTYDLEVWL QN YREISS S C FQ+RR+ +R+++ K+ + HTLNGSG+A Sbjct: 240 FGAAKTYDLEVWLPAQNTYREISSVSNCEAFQARRLQARFKNAQGKN-ELVHTLNGSGLA 298 Query: 389 VGRCLIAILENYLNADG 405 VGR L+A+LENY NADG Sbjct: 299 VGRTLVAVLENYQNADG 315 >gi|302502039|ref|XP_003013011.1| hypothetical protein ARB_00894 [Arthroderma benhamiae CBS 112371] gi|291176572|gb|EFE32371.1| hypothetical protein ARB_00894 [Arthroderma benhamiae CBS 112371] Length = 480 Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats. Identities = 120/447 (26%), Positives = 208/447 (46%), Gaps = 27/447 (6%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + +P+ + + ++R + + +++L E R + + +R N+ Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSRINAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N L E + L+E+ +E + + + I N + VP+ Sbjct: 61 KEIG--MKKRNKEDATDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N ++R+ + H E+ L D +R K+ G R LTG+ Sbjct: 119 DKNEDNNAVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKVTESEDPSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC--- 284 LI TSE L+ L+ E I K LP+++ + +R EAG+ G+D G+ R HQF K Sbjct: 238 LIATSEQPLSALHDGEWILEKELPIKYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKVCIG 297 Query: 285 ----ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 E IT+ E+S+ + M+ +EE K L + Y+V+++ +G L +A K DLE W Sbjct: 298 APKIEQFLITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAW 357 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKSLKFTHTLNGSGVAVGRCLIAILE 398 Q Y+E+ SCS C ++Q+R ++ R+ + H LN + A R L ILE Sbjct: 358 FPFQGEYKELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILE 417 Query: 399 NYLNADGSVTIPTVLRPYM-NNLAVIK 424 NY DG + +P VLR Y+ N + Sbjct: 418 NYQQEDG-IIVPEVLRKYIPGNPEFLP 443 >gi|312221793|emb|CBY01733.1| similar to seryl-tRNA synthetase [Leptosphaeria maculans] Length = 509 Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats. Identities = 137/462 (29%), Positives = 220/462 (47%), Gaps = 42/462 (9%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +DI+ IRQNP + R+ S+ I+ L E+ L + +R R N AQ+ Sbjct: 50 IDIKHIRQNPGLYEQNCIDRNYAAHSKASWRIVELHEQWLALQQSSRSLRERSNQLRAQL 109 Query: 59 GQAIAEGNLSLVD-------ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + + + A+ + K +L +E +E ++ ++ L +PN+ Sbjct: 110 AKVATKLKATDGNTVVPNQGAIITKAQETKAELKAIEAQETQIQEEMEALAQDLPNLSSV 169 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 P+GT I KP + H +IG+ LG++DF + SG + L G Sbjct: 170 HTPLGTDPETLGFINEHR-KPDRSRAGKSHVDIGQQLGILDFAASAHTSGWGWYFLVGDG 228 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD-----------DMF 220 A LE+AL Q+ + + G+ V+ P LV G P+ + D Sbjct: 229 AMLEQALVQYALSV-ARSKGWKAVAPPSLVYSHVASACGFQPRDQNGEQQIYAIEQSDKD 287 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 L T+E+ L + +H ++ LPL+ ++ +R+EAG+ G +T+G+ R H+ Sbjct: 288 KAKPQLALAGTAEIPLAGMKAHTTLDQAELPLKTVGVSRCYRAEAGARGAETKGLYRVHE 347 Query: 281 FWKCELVSITREED--------------SFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 F K E+ + T ++ S + MLS +EIL L LH R++ + T D Sbjct: 348 FTKVEMFAWTSPDNMGEDHFSSASATTSSQVVLDEMLSIQKEILSALGLHCRILEMPTTD 407 Query: 327 LGFSACKTYDLEVWLAGQNL---YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLN 383 LG SA + D+E + ++ + E++S S C ++QSRR+ +R R K + F HTLN Sbjct: 408 LGASATRKLDIEAFFPSRDRDDGWGEVTSTSMCTDYQSRRLQTRMRVKGGK-MYFPHTLN 466 Query: 384 GSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIK 424 G+ +AV R + AILEN+ N D GSVTIP VLR YM IK Sbjct: 467 GTALAVPRVIAAILENHWNEDEGSVTIPEVLRSYMGGQDKIK 508 >gi|221136500|ref|XP_002171132.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 242 Score = 295 bits (755), Expect = 9e-78, Method: Composition-based stats. Identities = 150/243 (61%), Positives = 179/243 (73%), Gaps = 2/243 (0%) Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS 241 M+D HT GY EV+ PLLV D +M+GTGQ+PKF DD F TT G WLIPT+EVSLTN+ + Sbjct: 1 MLDEHTQNFGYVEVTPPLLVNDASMFGTGQLPKFRDDQFHTTHGLWLIPTAEVSLTNIVA 60 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + +LP+R+T P FR+EAG+AGRDTRGM+R HQF K ELVSIT E+S EHER Sbjct: 61 QSNLALDTLPIRYTAYTPCFRAEAGAAGRDTRGMIRNHQFSKVELVSITTPEESDAEHER 120 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 M AE IL++L L YR + LC GD GF A KTYDLEVWL G N YREISSCS CG+FQ+ Sbjct: 121 MTGAAENILQKLQLPYRKLVLCAGDFGFCAKKTYDLEVWLPGANAYREISSCSNCGDFQA 180 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLA 421 RRMN++YR+ K L F +TLNGSG+AVGR L+AILENY ADGS+TIP VLR Y Sbjct: 181 RRMNAKYRNSEGK-LAFVNTLNGSGLAVGRTLVAILENYQEADGSITIPEVLRTYT-GFE 238 Query: 422 VIK 424 I+ Sbjct: 239 KIE 241 >gi|71755749|ref|XP_828789.1| seryl-tRNA synthetase [Trypanosoma brucei TREU927] gi|70834175|gb|EAN79677.1| seryl-tRNA synthetase, putative [Trypanosoma brucei] gi|261334698|emb|CBH17692.1| seryl-tRNA synthetase, putative [Trypanosoma brucei gambiense DAL972] Length = 479 Score = 295 bits (755), Expect = 9e-78, Method: Composition-based stats. Identities = 137/470 (29%), Positives = 213/470 (45%), Gaps = 44/470 (9%) Query: 2 LDIQWIRQNP--EHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA-- 56 LDIQ R + + ++R +P + I+ D+K R E + N S Sbjct: 3 LDIQLFRDETGANIIRESQRRRFADPDIVDAIIEADKKWRRTQFLTEASKKLINICSKAV 62 Query: 57 ------------------QIGQAIAEG--NLSLVDAL-----KNETSTLKEQLPILEKEE 91 Q+ +A G V+ L K + L +Q+ L KE Sbjct: 63 GAKKKAKEADGDTSEIPPQVKEAYENGTLKGEQVEQLCVLQLKQLSKDLSDQVAGLAKEA 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 ++ KL+ + N+ E VPI + + H I E LG+M Sbjct: 123 QQLEEERDKLMLNVGNILHESVPIAQDEETGNTVVRTFGNTTKRAK-LNHVSIMERLGMM 181 Query: 152 DF-DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D T ++G R VL G L L+ AL + +D + GYT P + + M Sbjct: 182 DTSKAVTSMAGGRSYVLKGGLVQLQVALVSYSLDF-LVKRGYTPFYPPFFLNRDVMGEVA 240 Query: 211 QIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 Q+ +F ++++ + D ++LI TSE+ + + PL++ ++ FR EAG+ Sbjct: 241 QLSQFDEELYQVSGDGDKKYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGA 300 Query: 268 AGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GRDT G+ R HQF K E + E+S+ E M++ +EE K L L YRVV++C+G Sbjct: 301 HGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSG 360 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD-----PNSKSLKFTH 380 L +A K YDLE W +RE+ SCS C ++QS+ +N RY ++ H Sbjct: 361 ALNNAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLRGTAAQNVKEYCH 420 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHILE 430 LNG+ A+ R + I ENY +G V IP VLRPYM + +I+ E+ + Sbjct: 421 MLNGTLCAITRTMCCICENYQTEEG-VVIPDVLRPYMMGIEMIRFENNAQ 469 >gi|159041457|ref|YP_001540709.1| seryl-tRNA synthetase [Caldivirga maquilingensis IC-167] gi|157920292|gb|ABW01719.1| seryl-tRNA synthetase [Caldivirga maquilingensis IC-167] Length = 474 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 126/441 (28%), Positives = 206/441 (46%), Gaps = 21/441 (4%) Query: 7 IRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG 65 +R+ P + LK R E + ++LD + + + K +++R RRNS S+QI +A E Sbjct: 15 LRERPGEVRRMLKWRGYEESMVDQFIALDNQWKSIKVKADELRHRRNSLSSQISKAPPEA 74 Query: 66 N---LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK--LISCIPNVPLEEVPIGTSAN 120 + + + E L +L +E E + S P E Sbjct: 75 RGLMIEEANKVLKELENLNAELKRIEDERDRLLRRFPNLLHESVYSTCPNESAESVALKY 134 Query: 121 ENILIRSVGK-----------KPSAIHLSREHFEIGEAL-GLMDFDRATKLSGARFSVLT 168 G H ++ E + GL D +A +++G+RF L Sbjct: 135 FGKPKAWRGYLSELSGFNGLEFNVIDWQPIGHADMLERVLGLGDTAKAGEVAGSRFFYLF 194 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRW 227 +A L AL + +D T + G+ V P ++ + + F D ++ + + Sbjct: 195 DDVAWLNLALSLYAVDFLT-QRGFRLVMPPHMLNYDVISSVIDFDAFKDAIYSVDNEQLY 253 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI T+E L LY + K LP+ +PS+R EAG+ RD +G+ R HQF+K E Sbjct: 254 LIGTAEHPLAALYRGSELLEKDLPILLAGFSPSYRKEAGAGNRDLKGIFRVHQFYKVEQF 313 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + T EDS++ HE++L +I L+L +RVV +C ++ +A K YDLE W+ Q ++ Sbjct: 314 AFTLPEDSWSWHEKLLGNLIDIWSSLELPFRVVLVCPREMSRTAAKQYDLEAWMPAQGMF 373 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 RE++SCS ++QS R+ R ++ HTLN + +AV R + AILEN DG+V Sbjct: 374 REMASCSNVTDWQSYRLGIRVIRK-GMRREYVHTLNSTAIAVERTITAILENNQEEDGTV 432 Query: 408 TIPTVLRPYMNNLAVIKKEHI 428 IP VL Y+ +++I Sbjct: 433 RIPKVLNKYLEAFPKAPRDYI 453 >gi|56090265|ref|NP_001007607.1| seryl-tRNA synthetase, cytoplasmic [Rattus norvegicus] gi|81885333|sp|Q6P799|SYSC_RAT RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|38197710|gb|AAH61765.1| Seryl-tRNA synthetase [Rattus norvegicus] gi|149025696|gb|EDL81939.1| seryl-aminoacyl-tRNA synthetase 1, isoform CRA_b [Rattus norvegicus] Length = 512 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 117/470 (24%), Positives = 205/470 (43%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKNE-----------------TSTLK-------EQLPILEKEEH 92 IG+ + + D E S +K E + + E Sbjct: 63 TIGEKMKKKEPVGEDESIPEDVLNFDDLTADTLAALKVSQIKKVRLLVDEAIQKCDGERV 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ + Sbjct: 241 SQFDEELYKVIGKGSEKSDDSSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ + M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G + +P LR +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-IVVPEKLREFMPPGLQELIP 469 >gi|147801318|emb|CAN77028.1| hypothetical protein VITISV_015339 [Vitis vinifera] Length = 466 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 136/468 (29%), Positives = 209/468 (44%), Gaps = 62/468 (13%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ NPE + + ++R+ + ++ LD++ R + E++R N + Sbjct: 1 MLDINLFREDKGHNPEIIRESQRRRYANVDLVDEVIHLDKEWRQRQFEFENLRKEFNKIN 60 Query: 56 AQIGQA-----------------------------IAEGN-----LSLVDALKNETSTLK 81 Q+ + AE + T K Sbjct: 61 KQVAKLQNLTLTQYCPVQYANCHMSMYPTGVSNKGKAEKKFWFISGEDASEMIKSTDENK 120 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 E E E ++L + I N+ + VP+ N +IRS G+K L + H Sbjct: 121 RLTAKKEAEVQEALATLNSKLEIIGNLVHDSVPVSNDEANNAVIRSWGEKKVEPKL-KNH 179 Query: 142 FEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 E+ E LG+ D + ++G R L G L +AL F +D + GYT + P + Sbjct: 180 VELVELLGIADLKKGANIAGGRGFYLKGDGVRLNQALINFGLDF-LEKRGYTALQTPFFM 238 Query: 202 RDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 R + M Q+ +F ++++ T D ++LI T+E L + + I LPLR+ + Sbjct: 239 RKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLDDWIHPSQLPLRYAGYS 298 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE--DSFTEHERMLSCAEEILKRLDLH 316 FR EAGS GRDT G+ R HQF K E IT DS+ HE M+ +E+ K L++ Sbjct: 299 SCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEDFYKMLNIP 358 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSL 376 Y+VV++ +G L +A K YDLE W YRE+ SCS C ++QSRR+ RY + Sbjct: 359 YQVVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCSNCTDYQSRRLEIRY----GQKK 414 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 + L G A L+NY DG V +P LRP+M + Sbjct: 415 Q----LRGPS-------AASLKNYQKEDG-VEVPEPLRPFMGGKTFLP 450 >gi|261749283|ref|YP_003256968.1| serine-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497375|gb|ACX83825.1| serine-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 424 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 140/423 (33%), Positives = 217/423 (51%), Gaps = 9/423 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP--QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML + +IR+N E + L+KR E + IL LD+ + + +I I N S +I Sbjct: 1 MLQVSFIRKNREKILSGLEKRKFEKRNLIDEILILDKSKKKIQYEINKISENENKISKKI 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL--EEVPIG 116 I + N+ + +K+ + ++ + ++ L + +P +E+ Sbjct: 61 SHIIGDKNVKKI-PIKSLKEESLSLKKKKKNLHIQLKNIIQNLEKKLDQIPNIPDEIVKK 119 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++ L + + I + H+E+ + L D TK+ G+ F V G A L+R Sbjct: 120 NLEKDDFLFQKIAPHSIKIENALPHWELAKKFQLFDLYLGTKICGSGFPVYIGKGAKLQR 179 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVS 235 L Q+ +D + + Y E S P L+ + + Y TGQIP M+ D +LIPT E+ Sbjct: 180 GLIQYFLDKNI-QASYKEYSFPYLINEISGYSTGQIPDKEGQMYLIEKDNFYLIPTGEIP 238 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L N Y + ++ K LP++ TT FR EAGS G RG+ R HQF K E++ IT + S Sbjct: 239 LMNCYRNNLLSYKDLPIKSTTYTSCFRREAGSYGSKVRGLNRLHQFEKVEIIQITTPDTS 298 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 F E M+S + ILK L+L +R++ L DLGF++ TYD EV+ Q + E+SS S Sbjct: 299 FYYLEEMISHVQNILKSLELPFRLIRLMGKDLGFASAITYDFEVYSMAQKKWLEVSSISN 358 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C NFQS R+N RY+ K ++ HTLNGS +A+ R + A+LEN + + IP VL P Sbjct: 359 CTNFQSNRLNLRYKTMTGK-IELCHTLNGSALALPRIMAALLENNQTVN-QINIPKVLVP 416 Query: 416 YMN 418 Y Sbjct: 417 YTG 419 >gi|73959361|ref|XP_866227.1| PREDICTED: similar to seryl-tRNA synthetase isoform 4 [Canis familiaris] Length = 504 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 116/460 (25%), Positives = 210/460 (45%), Gaps = 40/460 (8%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVRADGEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKN----------------ETSTLK-------EQLPILEKEEHE 93 IG+ + + +++ + S +K E + + E + Sbjct: 63 TIGEKMKKKEPVGDESIPEDALNLDDLTADTLANLKVSQIKKVRLLIDEAILKCDAERIK 122 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 + + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 LEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFEG 181 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 EKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQLS 240 Query: 214 KFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 +F ++++ TT+ ++LI TSE + L+ E + + LP+++ L+ FR E GS GR Sbjct: 241 QFDEELYKVTSTTEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGR 300 Query: 271 DTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 DTRG+ R HQF K E + S+ E M++ AE+ + L + Y +V++ +G L Sbjct: 301 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHIVNIVSGSLN 360 Query: 329 FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSG 386 +A K DLE W G +RE+ SCS C ++Q+RR+ RY ++F H LN + Sbjct: 361 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 420 Query: 387 VAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 A R + AILENY G + +P L+ +M +I Sbjct: 421 CATTRTICAILENYQTEKG-IVVPEKLKEFMPPGLQELIP 459 >gi|169612613|ref|XP_001799724.1| hypothetical protein SNOG_09430 [Phaeosphaeria nodorum SN15] gi|111062502|gb|EAT83622.1| hypothetical protein SNOG_09430 [Phaeosphaeria nodorum SN15] Length = 461 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 120/439 (27%), Positives = 200/439 (45%), Gaps = 23/439 (5%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI +PE + + +KR+ + + +++ E++R I + N+ Sbjct: 1 MLDINDFITERGGDPEKIRDSQRKRNAPVEIVDEVIADFEEHRKTQYAATQIGSSINALQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q+G L E LKE E E E L I N ++VP+ Sbjct: 61 KQVGAKKKA--KEDATELLEEMKKLKEDKAKKEAEAAEKLVKLNNKAKTIGNYVYKDVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIG---EALGLMDFDRATKLSGARFSVLTGHLA 172 + ++N +I++ + + L D +R K+ G R LTG+ Sbjct: 119 SNTEDDNAVIKTWAPENRKAEFKSDGIPHHGVLTRLAGYDPERGVKIVGHRGYCLTGYGL 178 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------G 225 L AL + ++ GYT P + + M T Q+ F ++++ T+ Sbjct: 179 FLNLALINYGLEF-LFNKGYTPNQPPFFMLRDQMAKTAQLSDFDEELYKVTESKDKPETD 237 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 ++LI TSE ++ L+S E + + LP+++ + +FR EAGS G+D G+ R HQF K E Sbjct: 238 KYLIATSEQPISALHSEEWLGTADLPIKYAGYSTNFRKEAGSHGKDAWGIFRIHQFEKVE 297 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA--G 343 +T E S+ + ML+ +EE + L L Y+VV++ +G L +A DLE W G Sbjct: 298 QFLLTTPEKSWEAFDDMLATSEEFYQSLGLPYQVVAIVSGALNNAAAMKRDLEAWFPVTG 357 Query: 344 QNLYREISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 Y+E+ S S C ++Q+R + R+ + + + H LNG+ A R L +LENY Sbjct: 358 GGEYKELVSISNCTDYQTRELEIRFGVKKQTATRKDYVHALNGTLCATERTLCCVLENYQ 417 Query: 402 NADGSVTIPTVLRPYMNNL 420 +G +P VLR Y+ Sbjct: 418 TPEG-FNVPEVLRKYIPGQ 435 >gi|148231408|ref|NP_001080487.1| seryl-tRNA synthetase [Xenopus laevis] gi|27697084|gb|AAH43975.1| Sars-prov protein [Xenopus laevis] Length = 510 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 126/469 (26%), Positives = 211/469 (44%), Gaps = 49/469 (10%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R+ NPE + +KR +P + +L+ D R + +++ ++N S Sbjct: 3 LDLDLFREDKGGNPELIRETQRKRFKDPGLVDALLNSDTAWRKCRFQADNLNKQKNLCSK 62 Query: 57 QIGQAIAEGN----------LSLVDALKNE------TSTLK-------EQLPILEKEEHE 93 IG+ + + +D L E + +K E + + E + Sbjct: 63 IIGEKMKKKEPLGDSDVLPENIQLDQLTAEILSALSVTQIKRLRVLIDEAITATDSERIK 122 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 + + + I N+ VPI + + + H ++ + + Sbjct: 123 LEGERFESLREIGNLLHPTVPISNDEDNDNKVERTWGDCEVQKR-YSHVDLVVMVDGFEG 181 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 ++ ++G+R L G L LE+AL Q + +E GYT + P +R E M Q+ Sbjct: 182 EKGAVVAGSRGYFLKGPLVFLEQALIQLALHT-LAEKGYTPIYTPFFMRKEVMQEVAQLS 240 Query: 214 KFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 +F ++++ D ++LI TSE + L+ E ++ + LP+R+ L+ F Sbjct: 241 QFDEELYKVIGKSSEKSDDNSIDEKYLIATSEQPIAALHRDEWLKPEDLPIRYAGLSTCF 300 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRV 319 R E GS GRDTRG+ R HQF K E S+ E M+ AE + L + YR+ Sbjct: 301 RQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMLEEMIMTAESFYQMLGIPYRI 360 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLK 377 V++ +G L +A K DLE W G + +RE+ SCS C ++Q+RR+ RY ++ Sbjct: 361 VNIVSGSLNHAASKKLDLEAWFPGSSAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVE 420 Query: 378 FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 F H LN + A R + AILENY +G + IP LR +M +IK Sbjct: 421 FVHMLNATMCATTRVICAILENYQTEEG-IVIPEKLRDFMPPGLKDIIK 468 >gi|312079977|ref|XP_003142404.1| Sars1 protein [Loa loa] gi|307762433|gb|EFO21667.1| Sars1 protein [Loa loa] Length = 484 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 121/462 (26%), Positives = 210/462 (45%), Gaps = 50/462 (10%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R+ +PE + + +KR+ + + ++ D++ R ++ N S Sbjct: 3 LDIDLFREEKGGDPELIRDSQQKRYKDVRLVDEVIDYDQRWRKERFSADNFNRLINLCSK 62 Query: 57 QIGQAIAEGNLSLVD-------------------------ALKNETSTLKEQLPILEKEE 91 IG+ + + D +K S + ++L + E Sbjct: 63 VIGEKLKKKEAIDADNPVPTDYMERLEVLNADDMKNLEILQIKKLKSIIDKKLMEKKIEM 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 ++ + + + I N+ VPI + + N + ++ G S S H ++ + Sbjct: 123 EKLEAKRHQSLIQIGNIIHSTVPISDNEDNNKVEKTFGDIESKKKYS--HVDLCVMIDGF 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D DR T ++G R L G L LE+A+ + G+ + P +R E M Q Sbjct: 181 DGDRGTSIAGGRGYFLKGPLVFLEQAVINLALQ-MLHFKGFVTLYTPFFMRKEVMQEVAQ 239 Query: 212 IPKFADDMFC------------TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F +++ T D ++LI TSE + + +E I LP+++ ++ Sbjct: 240 LSQFDQELYKVTGKGSEVIGDETNDEKYLIATSEQPIAAYHRNEWISEADLPIKYAGISS 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E + ++S+ + M+ AE+ K L + + Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKVEQFVLCSPHDDESWKMLDEMVENAEDFCKALGIPF 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKS 375 R+V + +G+L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 360 RIVCIVSGELNNAAAKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLKIRYGKTKKLDGE 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LNG+ A R L A+LENY +G + +P +LR +M Sbjct: 420 VSYVHMLNGTMCATTRVLCALLENYQEENG-IRVPEILRQFM 460 >gi|209489477|gb|ACI49235.1| hypothetical protein Csp3_JD06.001 [Caenorhabditis sp. PS1010] Length = 486 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 122/462 (26%), Positives = 212/462 (45%), Gaps = 50/462 (10%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R+ NPE + + +KR + + ++ D+ R + + ++N S Sbjct: 3 LDMDLFREEKGGNPELIRESQRKRFKDVTLVDQVIEWDQVWRKERFFADQLNRQKNVFSK 62 Query: 57 QIGQAIAEG-----NLSLVDALKNETSTLK--------------------EQLPILEKEE 91 IG+ + + + S+ D + N S LK E++ + Sbjct: 63 AIGEKMKKKEAQGTDDSVEDEIVNRLSELKLDELSALTVVQLKKLRVLVDEKIVESKAAM 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 + ++ + I N+ + V + + + N + R+ G S S + + Sbjct: 123 DAAEVARQEKLVQIGNLIHDSVVVSDNEDNNKVERTFGDITSKKKYSHVDLVV--MVDGF 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T ++G R L G L LE+A+ Q + + GYT + P +R E M Q Sbjct: 181 DGERGTVVAGNRGYFLKGPLVFLEQAIIQLALQR-LNGKGYTPLYTPFFMRKEVMQEVAQ 239 Query: 212 IPKFADDMF------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F D+++ T D ++LI TSE + + +E I+ LPL++ ++ Sbjct: 240 LSQFDDELYKVSGKGSEIAGDQTIDEKYLIATSEQPIAAYHRNEWIKESDLPLKYAGVST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E + D S+T + M+ AE + L++ Y Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCNPNDNESWTLFDEMIGNAESYYQELEIPY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKS 375 +V++ + +L +A K +DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 360 HIVNIVSAELNNAAAKKFDLEAWFPGSAAFRELVSCSNCLDYQARRLRVRYGQTKKLDGD 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++F H LN + A R + AILEN G + +P ++ +M Sbjct: 420 VQFVHMLNATMCATTRVICAILENNQTETG-INVPKAIQQWM 460 >gi|154312140|ref|XP_001555398.1| hypothetical protein BC1G_06103 [Botryotinia fuckeliana B05.10] gi|150850066|gb|EDN25259.1| hypothetical protein BC1G_06103 [Botryotinia fuckeliana B05.10] Length = 471 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 118/439 (26%), Positives = 198/439 (45%), Gaps = 28/439 (6%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ NP+ + + ++R+ + + ++++ E +R + ++ N Sbjct: 1 MLDVNDFITERGGNPQTIKDSQRRRYAPEEVVDEVIAMYEDHRKTQYAATQVNSKINETQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG L + + L ++ + E L K I I N+ E VP+ Sbjct: 61 KEIGAKKKA--KEDATELLQKKADLTKEKKTWDDAAAEKEVLLNKKIGTIGNLVHESVPV 118 Query: 116 GTSANENILIRSVGKK--PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + N +R+ + H E+ L D +R K+ G R L Sbjct: 119 NNDEDHNEELRTWAPQGVTVEKKDVLSHHEVLTRLDGYDPERGVKVVGHRGYFLKKWGVF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWL 228 L +AL + ++ GYT + P + E M T Q+ +F ++++ + ++L Sbjct: 179 LNQALINYGLEF-LDSKGYTPLQTPQFMLKEYMAKTAQLEQFDEELYKVVDGDAQNDKYL 237 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 I TSE ++ ++ E + +K +P+ R EAGS GRD G+ R HQF K E Sbjct: 238 IATSEQPISAFHADEWLTAKDMPI---------RREAGSHGRDAWGIFRVHQFEKIEQFV 288 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 +T E S+ E +RM+S +EE + L + YRVV++ +G L +A K YDLE W Q Y+ Sbjct: 289 LTDPEKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALNNAAAKKYDLEAWFPFQGEYK 348 Query: 349 EISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 E+ SCS C ++QSR + RY + + H LN + A R L +LEN+ +G Sbjct: 349 ELVSCSNCTDYQSRALEIRYGPKTQTGIRKNYVHALNSTLCATERALCCLLENFQTEEG- 407 Query: 407 VTIPTVLRPYMNNL-AVIK 424 +P LR Y+ I Sbjct: 408 FNVPAPLRKYLPGAPEFIP 426 >gi|302844263|ref|XP_002953672.1| hypothetical protein VOLCADRAFT_82377 [Volvox carteri f. nagariensis] gi|300261081|gb|EFJ45296.1| hypothetical protein VOLCADRAFT_82377 [Volvox carteri f. nagariensis] Length = 516 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 124/466 (26%), Positives = 193/466 (41%), Gaps = 58/466 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD ++I++N E + K R +++L ++ L + + +RA RN NS Sbjct: 57 LDFKFIKENVELVATNCKNRFSSADPHKVVALYDEFVALKTQADSLRAERNENS---NAM 113 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + AL LK+QL +E+ V SSL PN+ +VP+ + Sbjct: 114 KGKLDAEKRAALIARGQQLKDQLAEVEELLTRVESSLHPEGQREPNLTHPDVPLEREEAQ 173 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 VG + R+H + EAL L+DF+ A +++G +F L A LE AL + Sbjct: 174 ------VGAQRHFSFPPRDHVTLAEALDLVDFESAAEVTGQKFYYLRNAGALLELALVNY 227 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--GRWLIPTSEVSLTNL 239 + G+T + P LV+ + G P+ R L+ EV T + Sbjct: 228 AFN-KVVSRGFTPIMTPDLVKASVLEKCGFQPRGTGTQVRVWWGTRRGLLRYREVGGTGI 286 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ------------FWKCELV 287 K + + A G T L+ F Sbjct: 287 GL-----EKEEGPCRRDPGRAVKCPACGRGAVTVTGLQSLSLYVYFIGTHGACFLLISPP 341 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 S H++++ E+ + L LH++V+ + +GDLG A + YD+E W+ G Y Sbjct: 342 FFLSAPSSSALHQQLIDIEAEMFEELGLHFKVLDMPSGDLGAPAYRKYDVEAWMPGLQRY 401 Query: 348 REISSCSTCGNFQSRRMNSRYRD-----------------------------PNSKSLKF 378 EISS S C ++QSRR+N RYR S +F Sbjct: 402 GEISSASNCTDYQSRRLNIRYRPAAAAKAAAEADGAASSSGGGKKGGKKGGGGGSGKTEF 461 Query: 379 THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 HTLN + AV R ++AILEN+ DGSV +P LRPY+ + VI+ Sbjct: 462 VHTLNATACAVPRMIVAILENFQQEDGSVVVPPPLRPYLGGMEVIR 507 >gi|72135958|ref|XP_793542.1| PREDICTED: similar to Seryl-aminoacyl-tRNA synthetase 1 [Strongylocentrotus purpuratus] gi|115976015|ref|XP_001188820.1| PREDICTED: similar to Seryl-aminoacyl-tRNA synthetase 1 [Strongylocentrotus purpuratus] Length = 526 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 124/474 (26%), Positives = 205/474 (43%), Gaps = 55/474 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD++ R NPE + + KR + + ++ D + R L + +++ +N S Sbjct: 3 LDLELFRADKGGNPEKIKESQAKRFKDATLVDKVVEADTEWRKLRYQADNLNKLKNLCSK 62 Query: 57 QIGQAIAE----GNLSL------------------------VDALKNETSTLKEQLPILE 88 IG+ + + G+ S V LK +++ + + Sbjct: 63 MIGEKMKKKEPVGDESEPVPEAVTAQLGDLTREILDSHSLSVAQLKKVRQLVEDGIIECD 122 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 + E K + I N+ + V + +EN++ R G S + Sbjct: 123 NKRKECGDKRKASLWEIGNLLHDSVRVSNDEDENVIERMHGDCTVRKKYSHVDLIH--MI 180 Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 M+ +R T ++G R L G L A+ Q + + T GYT + P +R E M Sbjct: 181 DGMEAERGTVVAGNRGYFLKGAAVFLSLAVQQHALRILT-SRGYTPLYTPFFMRKEIMQE 239 Query: 209 TGQIPKFADDMF------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 Q+ +F D+++ T + ++LI TSE + + +E + LP ++ Sbjct: 240 VAQLSQFDDELYKVVGKGSEKSEENTIEEKYLIATSEQPIAAFHRNEWMSPSELPKKYAG 299 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLD 314 + FR E GS GRDTRG+ R HQF K E S+ + M+ AE+ + L Sbjct: 300 FSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFCFASPKDNMSWLLFDEMMDNAEKFCQSLG 359 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN-- 372 + YR+V + +G L +A K DLE W AG +RE+ SCS C ++Q+RR+ RY Sbjct: 360 IPYRIVGIVSGALNNAAAKKLDLEAWFAGSGAFRELVSCSNCTDYQARRLLVRYGQTKKM 419 Query: 373 SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN--LAVIK 424 + S ++ H LN + A R + AILEN G + IP +R +M IK Sbjct: 420 NASAEYVHMLNSTMCASTRVVCAILENNQTETG-IVIPEAIREFMPPEYKEFIK 472 >gi|224006852|ref|XP_002292386.1| seryl-trna synthetase [Thalassiosira pseudonana CCMP1335] gi|220972028|gb|EED90361.1| seryl-trna synthetase [Thalassiosira pseudonana CCMP1335] Length = 499 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 127/478 (26%), Positives = 211/478 (44%), Gaps = 56/478 (11%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +DI +R PE +++R +P + +L+ DE R + I+ +R + N Sbjct: 3 IDINSLRTYKGGAPELYRQYMQQRFKDPTLVDAVLAKDEAWREIRASIDSLRQQVNKLQK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 ++ + + +K E +++ ++ LE E V L++ I N+ EVPI Sbjct: 63 EVIAPKKKAKEPCEEEVK-EMKSIQAEIKRLEAELPVVADERDALLNRIGNIVDPEVPIS 121 Query: 117 TSANENILIRSVGKKPSAIHL------------------------SREHFEIGEALGLMD 152 + + L+ S+ +P H ++ + + Sbjct: 122 DDEDADNLVVSLYPEPLEAEQANGDKPPLLPASLSNLSYTLPPTKPLTHDDLLWRIDGYE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 R ++G R L L +AL + I + GY + P + + M G Q+ Sbjct: 182 PIRGQNVAGHRGYFLKNAGVLLNQALINYGIAF-LRKRGYQVLQPPYFMNKDVMSGIAQL 240 Query: 213 PKFADDMFCT---------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 F + ++ T ++LI TSE + + +E I+ K+LP R+ ++ FR Sbjct: 241 EDFDEQLYKVSGKTDDPENTSEKYLIATSEQPICAYHKNEWIDDKALPFRYAGISTCFRK 300 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSI--TREEDSFTEHERMLSCAEEILKRLDLHYRVVS 321 EAGS+GRD RG+ R HQF K E + E+S E RM+ A+E + L YRVV Sbjct: 301 EAGSSGRDIRGIFRVHQFEKIEQFCVVVDDFEESSKEQTRMIDAAKEFYESLGFPYRVVC 360 Query: 322 LCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK---- 377 + +G L +A K YDLE W GQ YRE+ SCS C ++Q+R + +R + + K Sbjct: 361 IVSGALNDAAVKKYDLEAWFPGQQAYRELVSCSNCTDYQARGVGARCGQKKTDTNKSKTK 420 Query: 378 ---------FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 + H LN + A GR + +LENY +G V +P VL P+M + + E Sbjct: 421 EEILAERASYVHFLNATLCATGRGICCLLENYQEENG-VRVPEVLVPFMGGIDFLPFE 477 >gi|73959367|ref|XP_866272.1| PREDICTED: similar to seryl-tRNA synthetase isoform 7 [Canis familiaris] Length = 505 Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 115/461 (24%), Positives = 209/461 (45%), Gaps = 41/461 (8%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVRADGEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKN----------------ETSTLK-------EQLPILEKEEHE 93 IG+ + + +++ + S +K E + + E + Sbjct: 63 TIGEKMKKKEPVGDESIPEDALNLDDLTADTLANLKVSQIKKVRLLIDEAILKCDAERIK 122 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 + + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 LEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFEG 181 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 EKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQLS 240 Query: 214 KFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +F ++++ + D ++LI TSE + L+ E + + LP+++ L+ FR E GS G Sbjct: 241 QFDEELYKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHG 300 Query: 270 RDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 RDTRG+ R HQF K E + S+ E M++ AE+ + L + Y +V++ +G L Sbjct: 301 RDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHIVNIVSGSL 360 Query: 328 GFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGS 385 +A K DLE W G +RE+ SCS C ++Q+RR+ RY ++F H LN + Sbjct: 361 NHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNAT 420 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 A R + AILENY G + +P L+ +M +I Sbjct: 421 MCATTRTICAILENYQTEKG-IVVPEKLKEFMPPGLQELIP 460 >gi|27777570|gb|AAM77028.1| seryl-tRNA synthetase [Streptomyces viridifaciens] Length = 383 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 131/389 (33%), Positives = 210/389 (53%), Gaps = 11/389 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++ +R++P+ + + + R + + +LS DE+ R + +++RA + I + Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKQLGKLIPK 61 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A AE L LK + + E + ++L+ + N+ +VP+G + Sbjct: 62 AAAEEKAE----LLKRAEQLKADVKAADAERDAADAETQELLLRLGNLVHPDVPVGGEED 117 Query: 121 ENI--LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 ++ + ++H E+G+ LG +D +R K+SG+RF LTG A LE AL Sbjct: 118 FVTLETHGTIRDFAAEGFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELAL 177 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLT 237 I + G+T + P LVR ++M GTG + + A D++ D +L+ TSEV L Sbjct: 178 VNAAIAQ-ATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLDKDDLYLVGTSEVPLA 236 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 + EII++ LPLR+ +P FR EAGS G+DTRG+ R HQF K E+ S EDS Sbjct: 237 AYHMDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSPA 296 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 EH+R+L ++ L L+L +RV+ + + DLG SA + +D E W+ Q YRE++S S C Sbjct: 297 EHQRLLEWEKQWLTSLELPFRVIDVASADLGASAARKFDCEAWIPTQGKYRELTSTSDCT 356 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSG 386 FQSRR++ R RD K +K TLNG+ Sbjct: 357 EFQSRRLSIRVRD--GKQVKPLATLNGTL 383 >gi|311896134|dbj|BAJ28542.1| putative seryl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 422 Score = 293 bits (749), Expect = 5e-77, Method: Composition-based stats. Identities = 177/432 (40%), Positives = 244/432 (56%), Gaps = 16/432 (3%) Query: 1 MLDIQWIRQ-NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M D++ + PE + L +R + + +L + +++ E +R + Sbjct: 1 MHDVRELIDLGPEAVR-RLGRRRYTLDLDGLRALHRRRAEQLEEHERLRGELKRAAK--- 56 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + L+E E+ L+ + IPN+PL+ VP G S Sbjct: 57 ------GGARDEDARELARRLREHARTAEEALRATEDELQARLLTIPNLPLDTVPDGDSE 110 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 E + +R G + H ++GEALG++D RA++LSGARF+V G A LERALG Sbjct: 111 KEAVEVRRSGPHRPVGGPALHHADLGEALGILDLPRASRLSGARFAVTRGPGARLERALG 170 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSL 236 F++DLHT+EHGYTE S P LV M GTGQ+PKF +D+F T +LIPT+EV L Sbjct: 171 AFLLDLHTTEHGYTEYSVPHLVDRATMTGTGQLPKFEEDLFATSVGDRELFLIPTAEVPL 230 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL + E++++ +LPL T P +RSEAGS GRDTRG+LR HQF K ELV I ED+ Sbjct: 231 TNLVAGELLDAGALPLALTARTPCYRSEAGSYGRDTRGILRLHQFEKVELVRICALEDAQ 290 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + E M+ EE LKRL+L YRVV L GDLGFSA TYD+EVW+ G + YREISS S C Sbjct: 291 AQLELMVGQVEECLKRLELSYRVVLLPAGDLGFSARTTYDIEVWMPGGDTYREISSVSDC 350 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+FQ+RR R+R + + TLNGS + +GR + A+LE DGSV +P L PY Sbjct: 351 GSFQARRAGIRHRGAEGRK-QVAATLNGSALPIGRTVAALLEQGAQPDGSVLLPAALAPY 409 Query: 417 MNNLAVIKKEHI 428 I + Sbjct: 410 T-GFRRILADGT 420 >gi|123417088|ref|XP_001305028.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3] gi|121886520|gb|EAX92098.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3] Length = 501 Score = 293 bits (749), Expect = 5e-77, Method: Composition-based stats. Identities = 125/435 (28%), Positives = 208/435 (47%), Gaps = 26/435 (5%) Query: 3 DIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 DI+ R + + +KR+ P+ + I+ DE+ R +K + D +N Sbjct: 18 DIKNFRGKTDEELQVWRENQRKRNRPPELIDQIVKDDEEYRAALKAVADTMKEKNQAQ-- 75 Query: 58 IGQAIAEGN----LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 +G ++A+K + L ++ LE + E+ + ++K +S + + EV Sbjct: 76 -ASLKPKGGVKLAPEEIEAIKEKCRQLTAKISELEAKRDELFAKVEKELSTVGVMIEPEV 134 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 P N +I GK P + R H E+ + + +R +++G R L G Sbjct: 135 PDSLDEANNKVIMMCGKIPEIPNF-RPHNELLAMIDGYEPERGARVAGHRGYYLKGMALK 193 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-------R 226 L +AL ++ +D HGYT + P ++ E M Q+ F + ++ Sbjct: 194 LNQALFRYGLDF-LQAHGYTAIHTPFFMKSEVMARVCQLEDFQETLYHIDSPTNDPKDDM 252 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LI TSE +L + +E ++ LP ++ + FR EAG++G+D G+ R HQF K E Sbjct: 253 FLIATSEQTLCGYHLNESLDDSQLPKKYCGFSSCFRKEAGASGKDNWGIFRVHQFEKVEQ 312 Query: 287 VSITREED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 IT + S HE+M+ + E +K L L +R V + +G+L +S + D+E W Sbjct: 313 FCITSPHNGESQKMHEQMVHNSCEFIKSLGLPFRAVLVVSGELNYSTARKVDIEAWFPSY 372 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENYLN 402 N YRE+ S S C +FQSR+++ RY +K ++ H LN + A R L ILENY Sbjct: 373 NQYRELVSASNCKDFQSRKLDIRYGHGKNKDGEKEYVHMLNATLCATERTLCCILENYQT 432 Query: 403 ADGSVTIPTVLRPYM 417 G + IP VL+PYM Sbjct: 433 PTG-IRIPKVLQPYM 446 >gi|126310917|ref|XP_001372417.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 513 Score = 293 bits (749), Expect = 5e-77, Method: Composition-based stats. Identities = 119/470 (25%), Positives = 206/470 (43%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALVRETQEKRFKDPGLVDQLVRADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLS-----------LVDALKNE------TSTLK-------EQLPILEKEEH 92 IG+ + + +D L E + +K E + + E Sbjct: 63 TIGEKMKKKEPVGDNESLPESVLKLDDLTAETLAGLKVTQIKKVRLLIDEAIIKCDAERM 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 QLEAERFESLREIGNLLHPSVPISNDEDTDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q + S GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQLALRT-LSSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ + Sbjct: 241 SQFDEELYKVIGKGSEKSDDSSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E S+ E M+S AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFEEMISTAEEFYQALGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G + +P L+ +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-IIVPEKLKEFMPPGLQELIP 469 >gi|237756220|ref|ZP_04584783.1| seryl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691612|gb|EEP60657.1| seryl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 251 Score = 293 bits (749), Expect = 5e-77, Method: Composition-based stats. Identities = 138/252 (54%), Positives = 183/252 (72%), Gaps = 2/252 (0%) Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDG 225 + A LERAL FM+D+H +HGYTEV P LV+ E ++GTGQ+PKF DD++ + Sbjct: 1 MFKEAARLERALINFMLDVHIKQHGYTEVWTPALVKPEILFGTGQLPKFKDDLYKIEDED 60 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +LIPT+EV+LTNL++ EI+ + LP +T P FR EAGS G+D +G+LRQHQF K E Sbjct: 61 LYLIPTAEVTLTNLHADEILSEEDLPKYYTAYTPCFRKEAGSHGKDVKGILRQHQFDKVE 120 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 LV I + EDS+ E E++++ AE IL+ L++ YRVV LCTGD+GFSA KTYD+EVW+ QN Sbjct: 121 LVKIVKPEDSYNELEKLVNEAERILQLLEIPYRVVLLCTGDMGFSAAKTYDIEVWIPSQN 180 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISSCS +FQ+RR RY+D + K+ + HTLNGSG+AVGR LIAI+ENY DG Sbjct: 181 RYREISSCSNTEDFQARRAKIRYKDKDGKN-HYVHTLNGSGLAVGRTLIAIMENYQKPDG 239 Query: 406 SVTIPTVLRPYM 417 + IP VL+ Y+ Sbjct: 240 TFEIPKVLKDYL 251 >gi|316978241|gb|EFV61250.1| seryl-tRNA synthetase, cytoplasmic [Trichinella spiralis] Length = 494 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 135/471 (28%), Positives = 214/471 (45%), Gaps = 52/471 (11%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R N + + ++ +KR + ++ D++ R ++ +N S Sbjct: 3 LDLDNFRVEKGGNVQAVRVSQQKRFQSVDLVDQVVETDQEWRRSRYLSDEWNRLKNLCSK 62 Query: 57 QIGQAIAEGN---------LSLVDALKNE---------TSTLKE-------QLPILEKEE 91 +IG+ I SL D L+ S +K+ ++ K Sbjct: 63 EIGEKIKRKEPVDGNSTLPDSLTDKLQKLTVDQIRALSVSQIKQLRLLIDHEMEKSYKLV 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 + + K +S I N+ VP+ + ++N ++R+ G+ S+ I + Sbjct: 123 ENLEAVRFKALSQIGNLVHNSVPVSENEDDNEIVRTWGELEVRKKYSQVDLGI--MVDGY 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R ++G+R L G L LE+AL Q + + YT + P +R E M Q Sbjct: 181 DSERGCSVAGSRGYFLKGPLVFLEQALIQLAM-HMLFKKKYTPLYTPFFMRKEVMQEVAQ 239 Query: 212 IPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + F D ++ + ++LI TSE + + E I +SLPLR+ + Sbjct: 240 LSDFDDQLYKVIGKSSEVKEEIAEEEKYLIATSEQPIAAYHRDEWISKESLPLRYVGFST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDT G+ R HQF K E IT + S+ E M+S AE + L++ Y Sbjct: 300 CFRQEVGSHGRDTSGIFRVHQFEKVEQFCITSPHDDASWEMLEEMISNAEMFYQTLNIPY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--S 375 RVVS+ +G+L +A K YDLE W G +RE+ SCS C ++QSRR+ RY Sbjct: 360 RVVSIVSGELNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQSRRLRIRYGQTKKMMAK 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN--LAVIK 424 +F H LNG+ A R + AILEN+ +G + +P LR YM + I Sbjct: 420 AEFVHMLNGTMCATTRTICAILENFQEENG-IAVPEALRQYMPDDYKDFIP 469 >gi|311334530|emb|CBN08646.1| seryl-tRNA synthetase [Microcosmus squamiger] Length = 449 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 110/449 (24%), Positives = 199/449 (44%), Gaps = 44/449 (9%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R++ P+ + KR+ + + ++ D++ R +++++ +N S Sbjct: 3 LDLDLFRKDKGGDPDKIRENQAKRYNDVTLVDKVVVADDEWRKCRYELDNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNLS------------------------LVDALKNETSTLKEQLPILEKEEH 92 IG+ + V +K + EQ+ Sbjct: 63 SIGEKMKRKEPVGETDELPEDTPALMVITQEALSKYNVLQIKKLRQLIDEQIEKCNARRA 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 + + + N+ E VPI + + + H ++ + + Sbjct: 123 NLEEVRLANLREVANLTHESVPISNDEDADNAVERTFGDCETRKR-YSHVDLVVMVDGYE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 +R ++G+R L G L LE+AL + +++GYT + P +R E M Q+ Sbjct: 182 GERGAVVAGSRGYFLKGPLVFLEQALINLALQT-LADNGYTPLYTPFFMRKEMMQEVAQL 240 Query: 213 PKFADDMFCTT-----------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 +F ++++ D ++LI TSE + + E ++ + LP+++ + F Sbjct: 241 SQFDEELYKVIGKASDKSDEGVDEKYLIATSEQPIAAFHRDEWLKREDLPIKYAGFSTCF 300 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVS 321 R EAGS GRDTRG+ R HQF K E + +DS+ + M+ AE K+L + YR+++ Sbjct: 301 RQEAGSHGRDTRGIFRVHQFEKIEQFVFSAPDDSWEAFDTMIGTAESFYKKLGIPYRIIN 360 Query: 322 LCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS--KSLKFT 379 + +G L +A K +DLE W G +RE+ SCS C ++Q+RR+ R+ + +F Sbjct: 361 IVSGALNNAAAKKFDLEAWFPGSGAFRELVSCSNCLDYQARRLRIRFGQTKKMMEKTEFV 420 Query: 380 HTLNGSGVAVGRCLIAILENYLNADGSVT 408 H LN + A R + AILENY +G V Sbjct: 421 HMLNATMCATTRVICAILENYQTEEGVVV 449 >gi|327271375|ref|XP_003220463.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Anolis carolinensis] Length = 514 Score = 292 bits (748), Expect = 6e-77, Method: Composition-based stats. Identities = 122/470 (25%), Positives = 211/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + PE + +KR +P + ++ D R + +++ +N S Sbjct: 3 LDLDLFRADKGGDPELVRETQRKRFKDPALVDALVEADGAWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNL--------SLVDALKN---------ETSTLK-------EQLPILEKEEH 92 IG+ + + L + S +K E + ++E Sbjct: 63 TIGEKMKKKEPVGNDDCIPENAQNLDELTGDILAGLQVSQIKKVRLLIDEAVLKCDEERL 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERLWGDCTVRKK-YSHVDLVVMVDGYE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + + GYT V P +R E M Q+ Sbjct: 182 GEKGAIVAGSRGYFLKGPLVFLEQALIQYALQMLL-SKGYTPVYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMF------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ T D ++LI TSE + L+ E ++ + LP+++ L+ Sbjct: 241 SQFDEELYKVLGKGSERSDDNTIDEKYLIATSEQPIAALHRDEWLKPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E S+ + M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSAAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY +G + IP LR +M +IK Sbjct: 421 EFVHMLNATMCATTRAICAILENYQTEEG-IVIPEKLRDFMPPGLKEMIK 469 >gi|301767668|ref|XP_002919248.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Ailuropoda melanoleuca] Length = 513 Score = 292 bits (748), Expect = 6e-77, Method: Composition-based stats. Identities = 115/469 (24%), Positives = 208/469 (44%), Gaps = 49/469 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADGEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKN----------------ETSTLK-------EQLPILEKEEHE 93 IG+ + + +++ + S +K E + + E + Sbjct: 63 TIGEKMKKKEPVGDESIPEDVLNLDDLTADTLANLKVSQIKKVRLLIDEAILKCDAERIK 122 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 + + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 LEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTIRKK-YSHVDLVVMVDGFEG 181 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 EKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQLS 240 Query: 214 KFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ F Sbjct: 241 QFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCF 300 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRV 319 R E GS GRDTRG+ R HQF K E + S+ E M++ AE+ + L + Y + Sbjct: 301 RQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHI 360 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLK 377 V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY ++ Sbjct: 361 VNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVE 420 Query: 378 FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 F H LN + A R + AILENY G + +P L+ +M +I Sbjct: 421 FVHMLNATMCATTRTICAILENYQTEKG-IVVPEKLKEFMPPGLQELIP 468 >gi|71897227|ref|NP_001026563.1| seryl-tRNA synthetase, cytoplasmic [Gallus gallus] gi|53127678|emb|CAG31168.1| hypothetical protein RCJMB04_2o24 [Gallus gallus] Length = 514 Score = 292 bits (748), Expect = 6e-77, Method: Composition-based stats. Identities = 118/461 (25%), Positives = 204/461 (44%), Gaps = 48/461 (10%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + P + +KR +P + ++ D R + +++ +N S Sbjct: 3 LDLDLFRADKGGDPAAVREMQRKRFKDPALVDALVRADGAWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNL-----------SLVDALKN------ETSTLK-------EQLPILEKEEH 92 IG + + +D L + S +K E + + E Sbjct: 63 TIGDKMKKKEPVGSDESVPESAQNLDELTADVLGGLQVSQIKKVRLLIDEAILECDAERV 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 + + + + I N+ VPI + + + + S H ++ + + Sbjct: 123 RLEAERFESLREIGNLLHPSVPISNDEDADNKVERIWGDCSCRKK-YSHVDLVVMVDGYE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT V P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGPLVFLEQALIQYALQS-LRAKGYTPVYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E ++ + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKAEDSSVDEKYLIATSEQPIAALHRDEWLKPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E S+ + M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ R+ + Sbjct: 361 IVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRFGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +F H LN + A R + AILENY +G + +P LR +M Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEEG-IVVPERLRDFM 460 >gi|118431671|ref|NP_148300.2| seryl-tRNA synthetase [Aeropyrum pernix K1] gi|152031700|sp|Q9YAG3|SYS_AERPE RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|116062994|dbj|BAA80986.2| seryl-tRNA synthetase [Aeropyrum pernix K1] Length = 460 Score = 292 bits (747), Expect = 8e-77, Method: Composition-based stats. Identities = 137/452 (30%), Positives = 215/452 (47%), Gaps = 33/452 (7%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R NPE L ++KR ++P + LD + R L+ + ++R R N + I +A Sbjct: 7 LELLRSNPEALKEHVRKRLMDPAIVDRAYRLDVEWRRLLTMVNEVRRRHNEITRMIAKA- 65 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 G+ + L E L + LE++ +V ++ + +PN+ +VP+G + Sbjct: 66 --GSREERERLIAEAKRLLREREDLEEKLKKVEREREEALLGLPNIVAPDVPVGDESA-- 121 Query: 123 ILIRSVGKKPSAIHLSREHFE-------------------------IGEALGLMDFDRAT 157 KP + F + E L L D RA Sbjct: 122 TRPIEFWGKPKVWKGHVDAFREQTEAYGFKVDHEVIEWRPRGHADMMEEVLKLGDTLRAA 181 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 +++G+RF L L L+ AL + ID T GY V P ++R M + F D Sbjct: 182 RVAGSRFYYLFEDLVFLDLALLMYAIDFMT-SKGYVLVLPPYMLRYNVMSRVIDLETFKD 240 Query: 218 DMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 ++ + +LI T+E L LY + I + LPL+ ++P FR EAG+ RD +G+ Sbjct: 241 AIYEIAGEDLYLIATAEHPLAALYYNSEIYDEDLPLKLVGVSPCFRKEAGAGNRDLKGIF 300 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E + E+S HE ++S A+EI K L++ +RVV++ +GDLG A K YD Sbjct: 301 RVHQFHKVEQFVYSLPEESSKLHEELISNAKEIFKGLEIPFRVVNIASGDLGACAVKKYD 360 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 LE W+ Q YRE+ S S C ++Q+ R+ R + HTLN + VA R + AI Sbjct: 361 LEAWMPAQGKYREMVSASNCTDWQAYRLGIRLVRRKGMERGYVHTLNATAVASTRTITAI 420 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 LEN+ + +G V IP LR Y+ + I Sbjct: 421 LENFQDEEGVVAIPRALRRYLEVFKRAPTDAI 452 >gi|303388974|ref|XP_003072720.1| seryl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] gi|303301862|gb|ADM11360.1| seryl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] Length = 429 Score = 292 bits (747), Expect = 8e-77, Method: Composition-based stats. Identities = 128/429 (29%), Positives = 202/429 (47%), Gaps = 11/429 (2%) Query: 1 MLDIQWIRQNP--EHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI IR E + + KKR + E LD + +++ I R N + Sbjct: 1 MIDIGLIRDEKSREKVVESEKKRFRDGTGVERAYELDRRKIETNFRLDQINTRVNQLDRE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKE---QLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 I +G L + +K+ + L+++ + L K++ I N+ +V Sbjct: 61 IKSGYKQGKNKEDADLGEKVKEMKDIQGEAKRLKEDVKVIEDELSKVMKGIGNIISPKVV 120 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 + +N +IRS S + + + K+ G R L+G +A L Sbjct: 121 VSNDEKDNEIIRSYRSGRSIKKDPKPFCVL--MKDFTHPEAGAKVVGHRGYYLSGKMARL 178 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV 234 +AL ++ ID GY + P++++ + M T Q+ F D ++ D +L+ TSE Sbjct: 179 AQALSRYAIDF-LENKGYVYIQTPVMLKRDVMGKTSQLSDFDDQLYKVEDDLYLVATSEQ 237 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 SL LY E I + P +F + FR EAG+ G+D G+ R HQF K E I E+ Sbjct: 238 SLAALYMDERIVPQETPKKFCGQSLCFRKEAGAHGKDNAGLFRVHQFEKIEQFVICSPEE 297 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S HE M+ EE + LD+ Y VVS+ +G+L +A YDLE + YRE+ SCS Sbjct: 298 SERHHEEMIKICEEFYQSLDISYNVVSIVSGELNDAAVMKYDLEAYFPNAEKYRELVSCS 357 Query: 355 TCGNFQSRRMNSRYRDPNSKSLK-FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 C ++QSR + RY + K + H LNG+ A+ R L I+ENY N G ++IP VL Sbjct: 358 NCTDYQSRELEIRYGIAKENNRKVYVHLLNGTMCAIQRTLCCIVENYQNERG-ISIPDVL 416 Query: 414 RPYMNNLAV 422 + Y ++ Sbjct: 417 QGYFGGDSI 425 >gi|296208728|ref|XP_002751220.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Callithrix jacchus] Length = 512 Score = 292 bits (746), Expect = 9e-77, Method: Composition-based stats. Identities = 117/470 (24%), Positives = 205/470 (43%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLS------------------------LVDALKNETSTLKEQLPILEKEEH 92 IG+ + + V +K + E + + E Sbjct: 63 TIGEKMKKKEPVGDDDSVPENVLNFDDLTADTLANLKVSQIKKVRVLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + S + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCSVRNK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G + +P LR +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-IIVPEKLREFMPPGLQELIP 469 >gi|156094491|ref|XP_001613282.1| seryl-tRNA synthetase [Plasmodium vivax SaI-1] gi|148802156|gb|EDL43555.1| seryl-tRNA synthetase, putative [Plasmodium vivax] Length = 616 Score = 292 bits (746), Expect = 9e-77, Method: Composition-based stats. Identities = 140/547 (25%), Positives = 229/547 (41%), Gaps = 126/547 (23%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R+ NPE + + KKR + + ++ DE+ R I K+E+++ N + Sbjct: 69 LDINLFRKEKGGNPEKIKESEKKRFHDETNVDKVIEFDEQWRKCIFKLEELKKNINLVNK 128 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +IG E + V+ LK ++ +KE++P L+ +E ++ K +S + N+ ++V Sbjct: 129 EIGAKKKEDKNADVEDLKKKSLAMKEEIPQLQNQERDLLKQRNKYLSKVGNLLNKDVVTS 188 Query: 117 TSANENILIRSVGKKPS----------------------------------------AIH 136 + N ++ + G Sbjct: 189 NDEDNNKVVTTWGVCKKLEVTAEEAPEGGSSKREVPVSGGISGSGGIGSISSISSGVGGK 248 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 HF++ +G +F + +++G R LTG L A+ Q+ I S++ YT V Sbjct: 249 RYYYHFDLLRKIGGANFKKGIQVAGHRGYYLTGAGFLLHNAILQYAISFLVSKN-YTPVY 307 Query: 197 APLLVRDEAMYGTGQIPKFADDMFCT---------------------------------- 222 P+ ++ M ++ F + ++ Sbjct: 308 PPVFMKKNIMEECAELDDFEETLYRIASSGGGSTGTAGGATGGASGAASGSPTSANVTQN 367 Query: 223 ----TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 D +LI TSE L L+ E IESK LPL++ ++ FR EAG+ G+D RG+LR Sbjct: 368 DELSRDDLFLIATSEQPLCALHKDETIESKYLPLKYAGVSSCFRKEAGAHGKDIRGILRV 427 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 HQF K E ++ + S H+ M+ EE + L++ YR+VS+ +G L +A +DLE Sbjct: 428 HQFDKIEQFCVSLPQTSNKVHKEMMKTCEEFYQSLNIPYRIVSIVSGALNNAAAVKFDLE 487 Query: 339 VWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKF-------------------- 378 + N YRE+ SCS C ++QS +N +Y D + K F Sbjct: 488 GYFPASNQYRELVSCSNCTDYQSNNLNVKYVDSSVKVGDFKESGGSGGGGGEGNGKGNYH 547 Query: 379 ---------------------THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 H LNG+ VA R L +LENY N +G + +P LRPYM Sbjct: 548 DEVGSDYEDFLQNFQTESRNTVHLLNGTMVAAQRFLCCLLENYQNGEG-IVVPEKLRPYM 606 Query: 418 NNLAVIK 424 NN+ I Sbjct: 607 NNVEFIP 613 >gi|51468022|ref|NP_001003882.1| seryl-tRNA synthetase, cytoplasmic [Danio rerio] gi|49619145|gb|AAT68157.1| seryl-tRNA synthetase [Danio rerio] gi|51980615|gb|AAH81608.1| Seryl-tRNA synthetase [Danio rerio] gi|260763742|dbj|BAI44434.1| seryl-tRNA synthetase [Danio rerio] Length = 515 Score = 292 bits (746), Expect = 9e-77, Method: Composition-based stats. Identities = 114/470 (24%), Positives = 202/470 (42%), Gaps = 49/470 (10%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + PE + +KR + + ++ D + R +++ +N S Sbjct: 3 LDLDLFRTDKGGDPEIIRETQRKRFKDVSLVDKLVQADTEWRKCRFTADNLNKAKNLCSK 62 Query: 57 QIGQAIAEGNL--------SLVDALKNETST----------------LKEQLPILEKEEH 92 IG+ + + L+ T+ + E + + + Sbjct: 63 SIGEKMKKKEPVGDDDTLPEEAQNLEALTAETLSPLTVTQIKKVRVLVDEAVQKTDSDRL 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + H ++ + + Sbjct: 123 KLEAERFEYLREIGNLLHPSVPISNDEDADNKVERTWGDCTVQKK-YSHVDLVVMVDGYE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL + + + Y + P +R E M Q+ Sbjct: 182 GEKGAIVAGSRGYFLKGPLVFLEQALINYALRI-LYSKNYNLLYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMF------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ T D ++LI TSE + E ++ + LP+R+ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNTVDEKYLIATSEQPIAAFLRDEWLKPEELPIRYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E D S+ + M+ AE + L + YR Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAESFYQTLGIPYR 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 IVNIVSGALNHAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKA 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM-NNLAVIKK 425 +F H LN + A R + AILEN+ +G + +P L+ +M L I K Sbjct: 421 EFVHMLNATMCATTRVICAILENFQTEEG-IIVPEPLKAFMPPGLTEIIK 469 >gi|226471436|emb|CAX70799.1| Seryl tRNA Synthetase [Schistosoma japonicum] Length = 479 Score = 292 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 133/483 (27%), Positives = 216/483 (44%), Gaps = 61/483 (12%) Query: 2 LDIQWIRQN----PEHLDIALKKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + P+ + KR + ++ DE R + + + +N S Sbjct: 3 LDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLCSK 62 Query: 57 QIGQAIAEGNLSL--------------------------VDALKNETSTLKEQLPILEKE 90 I + I + + S + LK+ + + E++ Sbjct: 63 AIAKRIKDNDDSPDCEITIFKGVLERLDSLADVDLQPLSIAQLKSLSCFIDEEIKTNAAS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 E+ S + + I N+ +VPI +N++IR+ S H ++ + Sbjct: 123 LIELESIRQHHLYEIGNLLHPDVPISKDEEDNLIIRTF--GKSDFRKPLSHVDLVVMVDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D +R + ++G R L G L LE+A+ + E GYT + P +R EAM Sbjct: 181 FDGERGSMVAGGRGYFLKGPLVFLEQAIINLAL-RMLDERGYTTLYTPFFMRKEAMRAVA 239 Query: 211 QIPKFADDMFCTTDGR--------------------WLIPTSEVSLTNLYSHEIIESKSL 250 Q+ +F ++++ T R +LI TSE + + +E + L Sbjct: 240 QLSQFDEELYKVTGRRELNATANHDSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQL 299 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEE 308 P+++ ++ FR E GS GRDTRG+ R HQF K E IT D S+ + M+S AE Sbjct: 300 PIKYAGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEA 359 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 + L L YR+VS+ +G+L +A YDLE W G +RE+ SCS C ++QSRR+ R+ Sbjct: 360 FYQALKLPYRIVSIVSGELNNAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRF 419 Query: 369 RDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 +KS+++ H LN + A R + AILENY G +T+P VLR M I K Sbjct: 420 GQTKKMNKSVEYVHMLNATMCATTRVICAILENYQTERG-ITVPDVLRSLMP--KKISKL 476 Query: 427 HIL 429 + + Sbjct: 477 YTI 479 >gi|73959359|ref|XP_866214.1| PREDICTED: similar to seryl-tRNA synthetase isoform 3 [Canis familiaris] Length = 513 Score = 292 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 115/469 (24%), Positives = 208/469 (44%), Gaps = 49/469 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVRADGEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKN----------------ETSTLK-------EQLPILEKEEHE 93 IG+ + + +++ + S +K E + + E + Sbjct: 63 TIGEKMKKKEPVGDESIPEDALNLDDLTADTLANLKVSQIKKVRLLIDEAILKCDAERIK 122 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 + + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 LEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFEG 181 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 EKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQLS 240 Query: 214 KFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ F Sbjct: 241 QFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCF 300 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRV 319 R E GS GRDTRG+ R HQF K E + S+ E M++ AE+ + L + Y + Sbjct: 301 RQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHI 360 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLK 377 V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY ++ Sbjct: 361 VNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVE 420 Query: 378 FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 F H LN + A R + AILENY G + +P L+ +M +I Sbjct: 421 FVHMLNATMCATTRTICAILENYQTEKG-IVVPEKLKEFMPPGLQELIP 468 >gi|74139849|dbj|BAE31768.1| unnamed protein product [Mus musculus] Length = 512 Score = 292 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 119/470 (25%), Positives = 209/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL + S +K E + + E Sbjct: 63 AIGEKMKKKEAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKCDGERV 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGPLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ + M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G + +P LR +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQAEKG-IAVPEKLREFMPPGLQELIP 469 >gi|291236905|ref|XP_002738381.1| PREDICTED: seryl-tRNA synthetase-like [Saccoglossus kowalevskii] Length = 518 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 120/463 (25%), Positives = 204/463 (44%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD++ R + P + KR+ + + ++ D R + ++ +N S Sbjct: 3 LDLELFRSDKGGDPAKIKENQAKRYKDVTLVDRVVEADTAWRKCRYQADNFNKLKNDCSK 62 Query: 57 QIGQAIAEG------NLSLVDALKNETSTLKEQ--------------------LPILEKE 90 IG+ + + + ++ + + + L E + E Sbjct: 63 MIGEKMKKKEPVGDADEAVPEDVVAKMEALTEDLLKNLTVNQIKKIRVLIDECIAKCNSE 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 E + + I N+ E VPI +EN ++R+ G+ S + Sbjct: 123 RLEFEKVRNENLKEIGNMLHESVPISNDEDENEIVRTFGELDVRKKYSHVDLIH--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ +R +SG+R L G + LE+AL Q + + +E + + P ++ E M Sbjct: 181 MEGERGAVVSGSRGYFLKGAVIFLEQALIQHGLRI-LAEKDFIPLYTPFFMKKEVMQEVA 239 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F D+++ + ++LI TSE + + E I + LP+++ + Sbjct: 240 QLSQFDDELYKVIGKGSEKSEDSGYEEKYLIATSEQPIAAYHRDEWIPTADLPIKYAGYS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE K L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPHENKSWEMFDEMIGNAENFYKSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SK 374 YR+V++ +G+L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 360 YRIVNIVSGELNNAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYSQTKKMGG 419 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + F H LN + A R + ILENY +G + IP VL+ YM Sbjct: 420 QVSFVHMLNATMCATTRVICVILENYQTEEG-IIIPDVLKQYM 461 >gi|269860513|ref|XP_002649977.1| seryl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|220066596|gb|EED44072.1| seryl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 426 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 127/431 (29%), Positives = 213/431 (49%), Gaps = 13/431 (3%) Query: 1 MLDIQWIR--QNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI R + E + + K R + + I+ +D + + E I R N N Q Sbjct: 1 MIDINLFRTPEGIEQVKKSEKNRFKDVSVVDKIVEMDLERIKTQYEYEQICKRINYNLKQ 60 Query: 58 IGQAIA-EGNLSLVDALKNETSTL--KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 IGQ + + S + + ++ +T+ K++ L K+ + SS+ + ++ I N+ EEVP Sbjct: 61 IGQNMKVANSPSEKEEILSKYNTIEEKKERDRLLKKLEMLESSIHEKLNGIGNILDEEVP 120 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 + + + N ++R I + + + + T+ G R L G +A L Sbjct: 121 VHETEDGNKVVREFQCGELPIKIQSFSQLMSAFINS---EAGTRACGHRGYFLEGQMALL 177 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSE 233 L + ID GY + P++++ E M T Q+ F + ++ D +LI TSE Sbjct: 178 ANGLRNYAIDF-LCSRGYVLIQTPVMLKKEVMKQTAQLSDFDEQLYHISDDNMYLIATSE 236 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 LT L+ + LP + + FR EAG+ G+D G+ R HQF K E I + E Sbjct: 237 QPLTTLFMEKRFTDSELPKMYAGESLCFRKEAGAHGKDNAGIFRVHQFEKIEQFIICKPE 296 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S+ HE+M+ AE+ K L++ +R V + +G++ +A K YDLE W YRE+ S Sbjct: 297 ESYAYHEKMILLAEDFYKTLEIPFRTVLIASGEMNDAASKKYDLEAWFPNAQKYRELVSA 356 Query: 354 STCGNFQSRRMNSRYR-DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C ++QSR +N Y ++ ++ H LN + AV R L ++ENY +A+G + IP V Sbjct: 357 SNCTDYQSRNLNVYYGYSKKNEKPQYVHMLNATLCAVQRTLCCLVENYQDANGKIRIPKV 416 Query: 413 LRPYMNNLAVI 423 L+ Y+N I Sbjct: 417 LQKYLN-FEYI 426 >gi|325091741|gb|EGC45051.1| seryl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 481 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 122/450 (27%), Positives = 198/450 (44%), Gaps = 42/450 (9%) Query: 1 MLDI---------QWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRAR 50 MLDI + I +N E L ++R + + I++L + R + Sbjct: 1 MLDIADFVHGATPEKITENQERLKENQRRRGAPVEAIDEIIALFKVARE--------GEK 52 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 N +IG+ N L E + L++Q + E + ++ I N Sbjct: 53 INKVQKEIGKKKK--NKEDAADLIAEKTELEKQKKDADAAATEKELLRDRKLASIGNYVH 110 Query: 111 EEVPIGTSANENILIRSV---GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 E+VP +N ++ + K H ++ L D R TK+ G R L Sbjct: 111 EDVPTSQDEADNAILSTWAPEWFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGHRGYCL 170 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-- 225 + L AL + ++ YT P + + M T Q+ +F ++++ T+ Sbjct: 171 VNYGLLLNLALVNYGLEF-LFGKKYTLNQPPYFMLKQFMAKTAQLEQFDEELYKVTENED 229 Query: 226 ----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 R+LI TSE L+ L+S E ++ LP+++ + +R EAGS G++ G+ R HQF Sbjct: 230 KASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQF 289 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E +T+ EDS+ + M+ +EE + L L YRVV + +G L +A + DLE W Sbjct: 290 EKIEQFVMTKPEDSWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWF 349 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDP-----------NSKSLKFTHTLNGSGVAVG 390 Q Y+E+ SCS C ++Q+R + RYR + + H LN + A Sbjct: 350 PSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKKIYVHALNATLCATE 409 Query: 391 RCLIAILENYLNADGSVTIPTVLRPYMNNL 420 R L ILENY G + +P VLR Y+ Sbjct: 410 RTLCCILENYQTETG-IIVPEVLRKYIPGQ 438 >gi|149708708|ref|XP_001494147.1| PREDICTED: similar to Seryl-tRNA synthetase, cytoplasmic (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase) (SerRS) isoform 1 [Equus caballus] Length = 513 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 115/469 (24%), Positives = 208/469 (44%), Gaps = 49/469 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADGEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKN----------------ETSTLK-------EQLPILEKEEHE 93 IG+ + + +++ + S +K E + + E + Sbjct: 63 TIGEKMKKKEPVGDESVPENVLNLDDLTADALANLKVSQIKKVRLLIDEAILKCDAERIK 122 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 + + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 LEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFEG 181 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 ++ ++G+R L G L LE+AL + + GYT + P +R E M Q+ Sbjct: 182 EKGAVVAGSRGYFLKGVLVFLEQALIHYALRT-LRNRGYTPIYTPFFMRKEVMQEVAQLS 240 Query: 214 KFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ F Sbjct: 241 QFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCF 300 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRV 319 R E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y + Sbjct: 301 RQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHI 360 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLK 377 V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY ++ Sbjct: 361 VNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVE 420 Query: 378 FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 F H LN + A R + AILENY G + +P L+ +M +I Sbjct: 421 FVHMLNATMCATTRTICAILENYQTEKG-IIVPEKLKEFMPPGLQELIP 468 >gi|75075821|sp|Q4R4U9|SYSC_MACFA RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|67971068|dbj|BAE01876.1| unnamed protein product [Macaca fascicularis] Length = 514 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 118/470 (25%), Positives = 207/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDA-----------------LKNETSTLK-------EQLPILEKEEH 92 IG+ + + D + S +K E + + E Sbjct: 63 TIGEKMKKKEPVEDDESVPENVLNFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G +T+P L+ +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 469 >gi|148670021|gb|EDL01968.1| seryl-aminoacyl-tRNA synthetase, isoform CRA_a [Mus musculus] Length = 515 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 119/470 (25%), Positives = 209/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 6 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 65 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL + S +K E + + E Sbjct: 66 TIGEKMKKKEAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKCDGERV 125 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 126 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 184 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 185 GEKGAVVAGSRGYFLKGPLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 243 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 244 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 303 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ + M++ AEE + L + Y Sbjct: 304 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYH 363 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 364 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 423 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G + +P LR +M +I Sbjct: 424 EFVHMLNATMCATTRTICAILENYQAEKG-IAVPEKLREFMPPGLQELIP 472 >gi|326381098|ref|NP_001191908.1| seryl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus] gi|18266844|sp|P26638|SYSC_MOUSE RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|14250361|gb|AAH08612.1| Sars protein [Mus musculus] gi|26344682|dbj|BAC35990.1| unnamed protein product [Mus musculus] gi|123220015|emb|CAM22589.1| seryl-aminoacyl-tRNA synthetase [Mus musculus] Length = 512 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 119/470 (25%), Positives = 209/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL + S +K E + + E Sbjct: 63 TIGEKMKKKEAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKCDGERV 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGPLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ + M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G + +P LR +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQAEKG-IAVPEKLREFMPPGLQELIP 469 >gi|27806419|ref|NP_776600.1| seryl-tRNA synthetase, cytoplasmic [Bos taurus] gi|18202925|sp|Q9GMB8|SYSC_BOVIN RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|9945026|gb|AAG03084.1|AF297553_1 seryl-tRNA synthetase [Bos taurus] gi|296489322|gb|DAA31435.1| seryl-tRNA synthetase [Bos taurus] Length = 514 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 118/470 (25%), Positives = 208/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKNE-----------------TSTLK-------EQLPILEKEEH 92 IG+ + + D E S +K E + + E Sbjct: 63 TIGEKMKKKEPVGNDESIPEDVLNLDDLTADTLTNLKVSQIKKVRLLVDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFESLREIGNLLHPSVPISDDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL QF + + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQFALRT-LASRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ + ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G + +P L+ +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-ILVPEKLKEFMPPGLQELIP 469 >gi|114558189|ref|XP_001148629.1| PREDICTED: hypothetical protein isoform 6 [Pan troglodytes] Length = 466 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 119/461 (25%), Positives = 208/461 (45%), Gaps = 48/461 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +F H LN + A R + AILENY G +T+P L+ +M Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFM 460 >gi|73959371|ref|XP_866304.1| PREDICTED: similar to seryl-tRNA synthetase isoform 8 [Canis familiaris] Length = 516 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 116/472 (24%), Positives = 208/472 (44%), Gaps = 52/472 (11%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVRADGEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKN-------------------ETSTLK-------EQLPILEKE 90 IG+ + + +++ E S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDESIPEDALNLDDLTADTLALLKELEVSQIKKVRLLIDEAILKCDAE 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 ++ + + + I N+ VPI + + + + + H ++ + Sbjct: 123 RIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDG 181 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Sbjct: 182 FEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVA 240 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 QLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLS 300 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E + S+ E M++ AE+ + L + Sbjct: 301 TCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIP 360 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK-- 374 Y +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 YHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMD 420 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 ++F H LN + A R + AILENY G + +P L+ +M +I Sbjct: 421 KVEFVHMLNATMCATTRTICAILENYQTEKG-IVVPEKLKEFMPPGLQELIP 471 >gi|256080782|ref|XP_002576656.1| seryl-tRNA synthetase [Schistosoma mansoni] gi|238661933|emb|CAZ32893.1| seryl-tRNA synthetase [Schistosoma mansoni] Length = 619 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 133/483 (27%), Positives = 212/483 (43%), Gaps = 61/483 (12%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +PE + KR + + +L DE R + + + +N S Sbjct: 3 LDLDLFRVDKGGDPELIRSNEIKRFRGTKRVDLLLEADENWRKARFRADHLNKVKNFCSK 62 Query: 57 QIGQAIAEGNLSL--------------------------VDALKNETSTLKEQLPILEKE 90 I + I E V LK+ + + E+ Sbjct: 63 TIAKKIKENKDGPDFDSNLFDDVFDRLDSLVEADLQSLGVAQLKSLSCLIDEETKRNAAF 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 E S ++ + I N+ +VPI + +N++IR+ S H ++ + Sbjct: 123 VVEFESVRQQQLYEIGNLLHPDVPISNNEEDNLVIRTF--GKSDFRKPLSHVDLVIMVDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D +R + ++G R L G L LE+A+ + E G+T + P +R EAM Sbjct: 181 FDGERGSTVAGGRGYFLKGPLVFLEQAIINLALQ-MLDERGFTPLYTPFFMRKEAMRAVA 239 Query: 211 QIPKFADDMFCTTDGR--------------------WLIPTSEVSLTNLYSHEIIESKSL 250 Q+ +F ++++ T R +LI TSE + + E + L Sbjct: 240 QLSQFDEELYKVTGRRELNVTTNHDSQTNESGEEEKYLIATSEQPIAAFHQDEWLPIDQL 299 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEE 308 P+++ ++ FR E GS GRDTRG+ R HQF K E IT D S+ + M+S AE Sbjct: 300 PIKYAGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEA 359 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 + L L YRVVS+ +G+L +A YDLE W G +RE+ SCS C ++QSRR+ R+ Sbjct: 360 FHQALKLPYRVVSIVSGELNNAASMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRF 419 Query: 369 RDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL--AVIK 424 +KS+++ H LN + A R + AILENY G + +P VL+ +M I Sbjct: 420 GQTKKMNKSVEYVHMLNATMCATTRVICAILENYQTEHG-IIVPDVLKSFMPKKYQKFIP 478 Query: 425 KEH 427 + Sbjct: 479 FKG 481 >gi|194036543|ref|XP_001925705.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Sus scrofa] Length = 514 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 117/470 (24%), Positives = 210/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSR 62 Query: 57 QIGQAIAEG-----NLSLVDALKN------------ETSTLK-------EQLPILEKEEH 92 IG+ + + + SL + + N + + +K E + + E Sbjct: 63 TIGEKMKKKEAVGNDESLPEDVLNLDDLTADTLTNLKVAQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + S H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCSVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ + ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ M+ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWKMLREMIETAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G + +P L+ +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-IVVPEKLKEFMPPGLQELIP 469 >gi|16306548|ref|NP_006504.2| seryl-tRNA synthetase, cytoplasmic [Homo sapiens] gi|19860217|sp|P49591|SYSC_HUMAN RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|7768886|dbj|BAA95602.1| Seryl tRNA Synthetase [Homo sapiens] gi|12653851|gb|AAH00716.1| Seryl-tRNA synthetase [Homo sapiens] gi|55959083|emb|CAI13599.1| seryl-tRNA synthetase [Homo sapiens] gi|119576773|gb|EAW56369.1| seryl-tRNA synthetase, isoform CRA_e [Homo sapiens] gi|123982658|gb|ABM83070.1| seryl-tRNA synthetase [synthetic construct] gi|123997327|gb|ABM86265.1| seryl-tRNA synthetase [synthetic construct] gi|189053470|dbj|BAG35636.1| unnamed protein product [Homo sapiens] gi|261859898|dbj|BAI46471.1| seryl-tRNA synthetase [synthetic construct] Length = 514 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 120/470 (25%), Positives = 210/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G +T+P L+ +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 469 >gi|332237491|ref|XP_003267937.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Nomascus leucogenys] Length = 514 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 120/470 (25%), Positives = 210/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G +T+P L+ +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 469 >gi|197097784|ref|NP_001125910.1| seryl-tRNA synthetase, cytoplasmic [Pongo abelii] gi|75070681|sp|Q5R9K9|SYSC_PONAB RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|55729644|emb|CAH91551.1| hypothetical protein [Pongo abelii] Length = 514 Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats. Identities = 120/470 (25%), Positives = 210/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G +T+P L+ +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 469 >gi|195114712|ref|XP_002001911.1| GI17096 [Drosophila mojavensis] gi|193912486|gb|EDW11353.1| GI17096 [Drosophila mojavensis] Length = 501 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 119/463 (25%), Positives = 203/463 (43%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R+ NP+ + KKR + E ++ D + R + +++ +N S Sbjct: 3 LDLDLFRKDKGGNPDAVRENQKKRFKDVGLVETVIEKDTEWRQRRHRADNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNL-------------SLVDALKNE------TSTLK-------EQLPILEKE 90 IG+ + + S + + E + +K + + +K Sbjct: 63 VIGEKMKKKEPLGADGEEVPASVRSDLTQITAETLQALTVNQIKQLRLLIDDAMTENQKA 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N E VP+ +EN + R+ G S + + Sbjct: 123 LELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERTFGDCTKRGKYSHVDLIV--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ ++ +SG R LTG LE+A+ Q + + Y + P +R E M Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQAVIQHAL-HSLYQKDYVPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ TD ++LI TSE + + E + SLP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKGSERAEESGTDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE+ + L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YR+V++ +G L +A K DLE W G YRE+ SCS C ++Q+RR+ RY + Sbjct: 360 YRIVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE + G + +P L+ YM Sbjct: 420 AVDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKKYM 461 >gi|114558177|ref|XP_001148285.1| PREDICTED: seryl-tRNA synthetase isoform 4 [Pan troglodytes] gi|114558179|ref|XP_001148840.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic isoform 9 [Pan troglodytes] Length = 514 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 120/470 (25%), Positives = 210/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G +T+P L+ +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 469 >gi|123463833|ref|XP_001317013.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3] gi|121899736|gb|EAY04790.1| seryl-tRNA synthetase family protein [Trichomonas vaginalis G3] Length = 501 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 125/435 (28%), Positives = 210/435 (48%), Gaps = 26/435 (5%) Query: 3 DIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 DI+ R + KKR+ P+ + I+ DE+ R +K + D +N Sbjct: 18 DIKNFRGKTDAELQVWRDNQKKRNRPPELIDQIVKDDEEYRAALKAVADTMKEKNQAQ-- 75 Query: 58 IGQAIAEG----NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 +G + ++A+K + L +++ LE + E+ + ++K +S + + EV Sbjct: 76 -ASLKPKGGVKLSPEEMEAVKEKCRQLAQKITELEAKRDELFAKVEKELSTVGVMIEPEV 134 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 P+ N +I GK P + + H E+ + + +R +++G R L G Sbjct: 135 PVSLDEANNKVIMQCGKIPEIPNF-KPHNELLAMIDGYEPERGARVAGHRGYYLKGMALK 193 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-------R 226 L +AL ++ +D HGYT + P ++ E M Q+ F + ++ Sbjct: 194 LNQALFRYGLDF-LQAHGYTAIHTPFFMKSEVMARVCQLEDFQETLYHIDSPTNDPKDDM 252 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LI TSE +L + +E ++ LP ++ + FR EAG++G+D G+ R HQF K E Sbjct: 253 FLIATSEQTLCGYHLNESLDDSQLPKKYCGFSSCFRKEAGASGKDNWGIFRVHQFEKVEQ 312 Query: 287 VSITREED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 IT + S HE+M+ + E +K L L +R V + +G+L +S + D+E W Sbjct: 313 FCITSPHNGESQKMHEQMVHNSCEFIKSLGLPFRAVLVVSGELNYSTARKVDIEAWFPSY 372 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENYLN 402 N YRE+ S S C +FQSR+++ RY +K ++ H LN + A R L ILENY Sbjct: 373 NQYRELVSASNCKDFQSRKLDIRYGHGKNKDGEKEYVHMLNATLCATERTLCCILENYQT 432 Query: 403 ADGSVTIPTVLRPYM 417 G + IP VL+PYM Sbjct: 433 PTG-IRIPKVLQPYM 446 >gi|328712780|ref|XP_001945803.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon pisum] Length = 489 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 123/461 (26%), Positives = 202/461 (43%), Gaps = 49/461 (10%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + +KR +P + ++ D K R L K +++ +N S Sbjct: 3 LDLDLFRTEKGGNPDQIRENQRKRFKDPSLVDNVVEADGKWRQLRFKADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSL------------------------VDALKNETSTLKEQLPILEKEEH 92 IG+ I V+ +K + L +K+ Sbjct: 63 TIGEKIKSKEPQPKDGGDVAADFVLDTITVDVLKPLSVEQIKKVRVLIDNALTQNDKDLL 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 +V + I N E VP+ EN ++ +VG H ++ + +D Sbjct: 123 DVEKTRNDSFKEISNFLHESVPLSNDEEENAVVATVGDCTV--KKRYSHIDLIHMIDGVD 180 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D T +SG R L G L+ AL Q + + GY + P +R E M Q+ Sbjct: 181 ADAGTTVSGTRGYYLKGPAVFLQSALVQEAL-RRWDDKGYKPLYTPFFMRKEIMQEVAQL 239 Query: 213 PKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ + + S P+R+ ++ Sbjct: 240 AQFDEELYKVIGKGSEKVGDHNLDEKYLIATSEQPIAALHRDQWLPEASFPIRYLGVSTC 299 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E +T S+ + M++ + + L + YR Sbjct: 300 FRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPFDNQSWILFDEMINNSRQFYDDLGIAYR 359 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKSL 376 VV++ +G L +A K DLE W G +RE+ SCS C ++QSRR+ RY ++ + Sbjct: 360 VVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKV 419 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + H LN + A R + AILE Y G + +P +L+ Y+ Sbjct: 420 DYVHMLNATACATTRVICAILETYQTETG-IKVPEILKKYL 459 >gi|291398355|ref|XP_002715855.1| PREDICTED: seryl-tRNA synthetase isoform 2 [Oryctolagus cuniculus] Length = 514 Score = 290 bits (741), Expect = 4e-76, Method: Composition-based stats. Identities = 118/470 (25%), Positives = 206/470 (43%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKNE-----------------TSTLK-------EQLPILEKEEH 92 IG+ + + D E S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESIPENVLNFDDVTADTLTNLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFESLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LRNRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G + +P L+ +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-IIVPEKLKEFMPPGLQELIP 469 >gi|320168775|gb|EFW45674.1| seryl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864] Length = 493 Score = 289 bits (740), Expect = 5e-76, Method: Composition-based stats. Identities = 129/467 (27%), Positives = 210/467 (44%), Gaps = 54/467 (11%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI+ R NP+ + + ++R+ + + +++LDEK R L + +D + S Sbjct: 1 MLDIELFRVNKGGNPDKVRESQRRRYADITLVDQVIALDEKWRALRGRADDWNRTAKACS 60 Query: 56 AQIG-QAIAEGNLSLVDALKN----------------------ETSTLKE-------QLP 85 Q G +A A+ D L LK + Sbjct: 61 KQYGVKAQAKEAQGDSDDLPAGFSLDTLVDLKGQPLTDALAPLTMRQLKAAKLLCEGRQA 120 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 ++K+ E ++ + I N+ + VP+ + + N + +VG S S Sbjct: 121 DVDKQVIESEAARDSTLRLIGNLVDDSVPVSNNEDNNRIEHTVGDTTSEKKYSHVDLIH- 179 Query: 146 EALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEA 205 + +D +R ++G R L G LE AL Q+ + +T ++ P + Sbjct: 180 -MIDGVDLERGVTVAGNRGYFLKGATVMLEFALIQYAF-TMLVQRDFTPLTTPFFMNKSI 237 Query: 206 MYGTGQIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLR 253 M Q+ +F +++ D ++LI TSE + + E +++K LP R Sbjct: 238 MQEVAQLSQFDTELYKVHAKASENPNDNATDEKYLIATSEQPIAAFHRDEWMDTKELPKR 297 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILK 311 + + FR E GS GRDT G+ R HQF K E IT D S+ E+ML A + + Sbjct: 298 YAGYSSCFRQEVGSHGRDTAGIFRVHQFEKIEQFCITSPHDTESWQMMEQMLKNATDFYQ 357 Query: 312 RLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDP 371 L + YRVV++ +G+L +A K YD+E W G +RE+ SCS C ++QSRR+ RY Sbjct: 358 NLGIGYRVVNIVSGELNNAASKKYDVEGWFPGSKAFRELVSCSNCTDYQSRRLRIRYGTK 417 Query: 372 N-SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++ F H LN + A+ R + ILE Y +G + +P VLR YM Sbjct: 418 KANEDATFVHMLNSTMCALTRVICIILETYQTEEG-IVVPEVLRMYM 463 >gi|322706038|gb|EFY97620.1| putative serine-tRNA ligase, cytosolic [Metarhizium anisopliae ARSEF 23] Length = 471 Score = 289 bits (740), Expect = 5e-76, Method: Composition-based stats. Identities = 121/461 (26%), Positives = 203/461 (44%), Gaps = 50/461 (10%) Query: 1 MLD-IQWIRQ---NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD I +I + +PE + + ++R + + I++L E +R + ++ N Sbjct: 1 MLDVIDFITERGGDPEKIRESQRRRSANVEVVDEIIALFEDHRRTQYSATQVNSKINDVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QIG D L + L+++ L + E + LK I + N + VP+ Sbjct: 61 KQIGAKKKA--KEDADELLKQKVELEKEKKALVESAAEKDALLKAKIKTVGNYVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGE---ALGLMDFDRATKLSGARFSVLTGHLA 172 + + N++ R+ + + + E L D DR K+ G R L Sbjct: 119 SNNEDNNVVERTWAPEGATVEKRSNVLSHHEVLLRLDGYDPDRGVKVVGHRGYFLRQWGV 178 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L +AL + ++ S+ GYT + P + + M T Q+ +F ++++ + ++ Sbjct: 179 FLNQALINYGLEF-LSQRGYTPLQTPQFMLKDYMGKTAQLEQFDEELYKVTDGEAKNDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC--- 284 LI TSE ++ ++ E + K LP++ EAGS GRD G+ R HQF K Sbjct: 238 LIATSEQPISAFHADEWLIPKDLPIK---------REAGSHGRDAWGIYRVHQFEKVKAY 288 Query: 285 ------------------ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 E +T E S+ M+ +EE K L+L Y++VS+ +G Sbjct: 289 LPAPCINRGSFTANRAKIEQFLLTDPEKSWDAFHDMIGISEEFYKSLELPYQIVSIVSGA 348 Query: 327 LGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNG 384 L +A K DLE W Q Y+E+ SCS C ++QSR + R+ + K+ H LN Sbjct: 349 LNNAASKKLDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRFGSKMQTDVKKKYVHCLNS 408 Query: 385 SGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL-AVIK 424 + A R + ILENY +G + +P LR Y+ I Sbjct: 409 TLCATTRTMCCILENYQTEEG-LRVPEPLRKYLPGAPEFIP 448 >gi|1050527|emb|CAA62635.1| seryl-tRNA synthetase [Homo sapiens] Length = 514 Score = 289 bits (740), Expect = 5e-76, Method: Composition-based stats. Identities = 120/470 (25%), Positives = 210/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLSKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G +T+P L+ +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 469 >gi|325186768|emb|CCA21315.1| seryltRNA synthetase putative [Albugo laibachii Nc14] Length = 462 Score = 289 bits (740), Expect = 6e-76, Method: Composition-based stats. Identities = 132/430 (30%), Positives = 213/430 (49%), Gaps = 8/430 (1%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD + + + E ++ R + E +++L + R L ++ +RARRN + Sbjct: 24 LDYKKLTETLEEWVQNVRNRMCDANPERVVALYQHQRTLKTELNHLRARRNVFVQHVKST 83 Query: 62 IAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 ++ L + ++ L+E + EK+ +V S L+ +PN PIG Sbjct: 84 KSQHVATTNDLSEEMQRNGKQLRETIICKEKKLEQVTSELELEAMNLPNDTHPNTPIGAE 143 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 L+ S G+KP ++H ++ LGL+D K++G++F L A LE AL Sbjct: 144 DASK-LLVSYGQKPRFDFAVKDHSDLMHDLGLIDTISGAKVAGSKFIYLRNEAAMLEIAL 202 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSL 236 Q+ + G+ V P + + + G G P+ L TSE++L Sbjct: 203 VQYTLQ-KLRHRGFEIVFPPDVAQSSLIEGCGFQPRGEATQIYSIADSDLCLTATSEITL 261 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE-EDS 295 + ++EI+ + LPL++ + FR+E G GR TRGM R HQF K E+ + S Sbjct: 262 AGMKTNEILPTNDLPLKYAAFSHCFRTEIGHGGRPTRGMYRIHQFSKVEMFAFCANVTQS 321 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 + ML+ E+ + L LH+ VV + T +LG A + D+ W+ G+ Y EISS S Sbjct: 322 EHFFQEMLTIQCEMYQELGLHFNVVEMATQELGAPAHRKLDILAWMPGRKEYGEISSLSY 381 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 C ++Q+RR+N R++ S F HTLNG+ AV R LIA+ E+Y DGSV IP VL+P Sbjct: 382 CTDYQARRLNIRHKANKKDSAAFVHTLNGTACAVPRLLIALFESYQQEDGSVRIPVVLQP 441 Query: 416 YMNNLAVIKK 425 ++ A I++ Sbjct: 442 FLGMQADIRR 451 >gi|189190930|ref|XP_001931804.1| seryl-tRNA synthetase synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973410|gb|EDU40909.1| seryl-tRNA synthetase synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 509 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 135/464 (29%), Positives = 226/464 (48%), Gaps = 41/464 (8%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +DI+ IRQNP + R+ S+ IL L E+ L + +R R N A + Sbjct: 47 IDIKHIRQNPGLYEQNCVDRNYAAHSKSSWRILELHEQWLQLQQSSRSLRERNNRIRAHL 106 Query: 59 GQAIAEGNLSL------VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + + + + E +K +L +E +E ++ ++ L +PN+ Sbjct: 107 AKTASRVKDADGKPVALREGMIGEAKAIKAELSAVEAQETQLQEEIESLAQDLPNLSSTH 166 Query: 113 VPIGTSANENILIRSV-GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 P+GT + I + G +PS + H +IG+ LG++DF + + SG + L G Sbjct: 167 TPVGTEPDVLGYINAHLGSEPSQSKSQKSHVDIGQELGILDFTGSAQTSGWGWYFLIGDG 226 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-------- 223 A LE+AL Q+ + + T + G+ V+ P LV G P+ + Sbjct: 227 AMLEQALVQYALRVAT-KKGWKAVAPPSLVYSHIASACGFQPRDQNGEQQVYAIEQAEKD 285 Query: 224 ---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 L T+E+ L + ++ E LPL+ ++ +R+EAG+ G DT+G+ R H+ Sbjct: 286 KAKPQLALAGTAEIPLAGMKVNQTFEESELPLKTVGVSRCYRAEAGARGADTKGLYRVHE 345 Query: 281 FWKCELVSITREED-------------SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 F K E+ + T + S E MLS +EIL+ L LH R++ + + DL Sbjct: 346 FTKVEMFAWTSPDHAGEDHFTAQTTQSSEVIFEEMLSIQKEILEALGLHCRILEMPSTDL 405 Query: 328 GFSACKTYDLEVWLAGQ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLN 383 G SA + D+E + + + E++S S C ++QSRR+ +R R K L+F +TLN Sbjct: 406 GASATRKLDIEAFFPSRQDIDQGWGEVTSTSMCTDYQSRRLQTRMRIKGGK-LEFPYTLN 464 Query: 384 GSGVAVGRCLIAILENYLNA-DGSVTIPTVLRPYMNNLAVIKKE 426 G+ +AV R L A+LEN+ + D +VTIP VLRP+M+ I+ + Sbjct: 465 GTALAVPRVLAALLENHWDEQDRTVTIPEVLRPFMDGQEKIQTQ 508 >gi|24581334|ref|NP_608743.2| CG17259 [Drosophila melanogaster] gi|7295855|gb|AAF51155.1| CG17259 [Drosophila melanogaster] gi|54650696|gb|AAV36927.1| LP20978p [Drosophila melanogaster] gi|220952100|gb|ACL88593.1| CG17259-PA [synthetic construct] Length = 501 Score = 288 bits (738), Expect = 8e-76, Method: Composition-based stats. Identities = 119/463 (25%), Positives = 202/463 (43%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + KKR + E +++ D + R + +++ +N S Sbjct: 3 LDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNL-------------SLVDALKNE------TSTLK-------EQLPILEKE 90 IG+ + + + + E + +K + + +K Sbjct: 63 VIGEKMKKKEPVGAMSEDLPADVTKDLTEIVAETLQPLTVNQIKQLRVLIDDAMTENQKS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N E VP+ +EN + R+ G S H ++ + Sbjct: 123 LELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERTFGDCEKRGKYS--HVDLIVMIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ ++ +SG R LTG LE+AL Q + Y + P +R E M Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHAL-HLLYARDYVPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ D ++LI TSE + + E + SLP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKGSEKAEEVGIDEKYLIATSEQPIAAYHRDEWLPESSLPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE+ + L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YRVV++ +G L +A K DLE W G YRE+ SCS C ++Q+RR+ R+ + Sbjct: 360 YRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE + G + +P L+ YM Sbjct: 420 AVDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKKYM 461 >gi|196006439|ref|XP_002113086.1| hypothetical protein TRIADDRAFT_25588 [Trichoplax adhaerens] gi|190585127|gb|EDV25196.1| hypothetical protein TRIADDRAFT_25588 [Trichoplax adhaerens] Length = 491 Score = 288 bits (738), Expect = 8e-76, Method: Composition-based stats. Identities = 121/462 (26%), Positives = 204/462 (44%), Gaps = 50/462 (10%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R+ NPE + +KR + + ++ LD + R L ++ +N S Sbjct: 3 LDLDLFREDKGGNPESIRQCQRKRFKDVSLVDQVVQLDSEWRKLRFAADNWNKLKNQCSK 62 Query: 57 QIGQAIAEGNLSLVDA-------------------------LKNETSTLKEQLPILEKEE 91 G+ + + + D +K S + +++ E Sbjct: 63 VYGEKMKKKEETGTDDSLEGDVVAKLANLTIDDLRTLTPVRVKKIRSLIDDRIAACNAEV 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 +V + + I N+ E VPI + N ++ + G + H ++ + + Sbjct: 123 IKVEERRSEKLRAIGNLLHESVPISNDEDNNAVVATHGDC--EVKKRYSHIDLAYMVDGV 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T +G R L G L LE AL Q + + ++ GY + P L+R E M Q Sbjct: 181 DTNRGTVTAGGRGYYLKGKLVFLEFALIQHALRI-LAKKGYVPLYTPFLMRKEVMTEVAQ 239 Query: 212 IPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F ++++ D ++LI TSE + + E I LP ++ ++ Sbjct: 240 LSQFDEELYKVIGKGSENVDDSSIDEKYLIATSEQPIAAYHRAEWINPSELPKKYAGVST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E + D S+ E M+ A + + L + Y Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWKLMEEMIENASDYYQSLGISY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK 377 R+V++ +G L +A K DLE W G +RE+ SCS C ++QSRR+ R+ + + Sbjct: 360 RIVNIVSGALNNAASKKLDLEAWFPGSGAFRELVSCSNCTDYQSRRLQIRFGQTKKMNAQ 419 Query: 378 --FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + H LN + A R + AILE + G + +P VL Y+ Sbjct: 420 AEYVHMLNSTMCATTRAICAILETFQTETG-IAVPEVLHQYL 460 >gi|226489498|emb|CAX75893.1| Seryl tRNA Synthetase [Schistosoma japonicum] Length = 614 Score = 288 bits (738), Expect = 8e-76, Method: Composition-based stats. Identities = 131/471 (27%), Positives = 211/471 (44%), Gaps = 59/471 (12%) Query: 2 LDIQWIRQN----PEHLDIALKKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + P+ + KR + ++ DE R + + + +N S Sbjct: 3 LDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLCSK 62 Query: 57 QIGQAIAEGNLSL--------------------------VDALKNETSTLKEQLPILEKE 90 I + I + S + LK+ + + E++ Sbjct: 63 AIAKRIKDNEDSPDCQITIFKGVLERLDSLADVDLQPLSIAQLKSLSCFIDEEIKTNAAS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 E+ S + + I N+ +VPI +N++IR+ S H ++ + Sbjct: 123 LIELESIRQHHLYEIGNLLHPDVPISKDEEDNLIIRTF--GKSDFRKPLSHVDLVVMVDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D +R + ++G R L G L LE+A+ + E GYT + P +R EAM Sbjct: 181 FDGERGSMVAGGRGYFLKGPLVFLEQAIINLAL-RMLDERGYTTLYTPFFMRKEAMRAVA 239 Query: 211 QIPKFADDMFCTTDGR--------------------WLIPTSEVSLTNLYSHEIIESKSL 250 Q+ +F ++++ T R +LI TSE + + +E + L Sbjct: 240 QLSQFDEELYKVTGRRELNATANHDSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQL 299 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEE 308 P+++ ++ FR E GS GRDTRG+ R HQF K E IT D S+ + M+S AE Sbjct: 300 PIKYAGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEA 359 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 + L L YR+VS+ +G+L +A YDLE W G +RE+ SCS C ++QSRR+ R+ Sbjct: 360 FYQALKLPYRIVSIVSGELNNAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRF 419 Query: 369 RDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +KS+++ H LN + A R + AILENY G +T+P VLR M Sbjct: 420 GQTKKMNKSVEYVHMLNATMCATTRVICAILENYQTEHG-ITVPDVLRSLM 469 >gi|195470961|ref|XP_002087775.1| GE14950 [Drosophila yakuba] gi|194173876|gb|EDW87487.1| GE14950 [Drosophila yakuba] Length = 501 Score = 288 bits (738), Expect = 8e-76, Method: Composition-based stats. Identities = 119/463 (25%), Positives = 202/463 (43%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + KKR + E +++ D + R + +++ +N S Sbjct: 3 LDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNL-------------SLVDALKNE------TSTLK-------EQLPILEKE 90 IG+ + + + + E + +K + + +K Sbjct: 63 VIGEKMKKKEPVGAMSEDLPADVTKDLTEIVAETLQPLTVNQIKQLRVLIDDAMTENQKS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N E VP+ +EN + R+ G S H ++ + Sbjct: 123 LELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERTFGDCEKRGKYS--HVDLIVMIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ ++ +SG R LTG LE+AL Q + Y + P +R E M Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHAL-HLLYARDYVPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ D ++LI TSE + + E + SLP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKGSEKAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE+ + L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YRVV++ +G L +A K DLE W G YRE+ SCS C ++Q+RR+ R+ + Sbjct: 360 YRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE + G + +P L+ YM Sbjct: 420 AVDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKKYM 461 >gi|84688034|ref|ZP_01015895.1| seryl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84663940|gb|EAQ10443.1| seryl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 360 Score = 288 bits (738), Expect = 9e-76, Method: Composition-based stats. Identities = 172/360 (47%), Positives = 232/360 (64%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NPE D A+ +R L S +L++DE R I K E +A N + IG Sbjct: 1 MHDIRTIRDNPEAFDAAMARRGLSGVSAEVLAIDEARRAAILKAETEQAEANKAAKAIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G+ + + L+ E + K+ + L E L +L+ +PNV ++VP G + Sbjct: 61 AKASGDEAEFERLRAEVAEKKQHIAALNDEAKAKDEELTQLLMTLPNVIADDVPDGADED 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ IR G +EH+++ +DF+ A KLSG+RF VL+G +A L RAL Q Sbjct: 121 DNVEIRRWGTPRVFDFAPKEHYDLAAVQDGLDFETAAKLSGSRFVVLSGAVARLHRALAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 FM+D H E+G TE P+LVR+E MYGTGQ+PKF +D + TT+G WLIPT+EV+LTN+ Sbjct: 181 FMLDTHVDENGLTETITPVLVREEMMYGTGQLPKFGEDSYKTTNGWWLIPTAEVTLTNIV 240 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + I + LP R+ FRSEAGSAG+DT GMLRQHQF K E+VSIT+ ++S EH+ Sbjct: 241 NGATISADYLPRRYVAHTQCFRSEAGSAGKDTAGMLRQHQFEKVEMVSITKPDESEAEHD 300 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 RM CAE+IL+RL L YR V LCTGD+GF A +T+D+EVWL GQ+ YREISS ST G+FQ Sbjct: 301 RMTRCAEDILERLGLPYRTVKLCTGDIGFGARRTHDIEVWLPGQDTYREISSVSTTGDFQ 360 >gi|195342173|ref|XP_002037676.1| GM18172 [Drosophila sechellia] gi|194132526|gb|EDW54094.1| GM18172 [Drosophila sechellia] Length = 501 Score = 288 bits (738), Expect = 9e-76, Method: Composition-based stats. Identities = 118/463 (25%), Positives = 200/463 (43%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + KKR + E +++ D + R + +++ +N S Sbjct: 3 LDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNL-------------SLVDALKNE------TSTLK-------EQLPILEKE 90 IG+ + + + + E + +K + + +K Sbjct: 63 VIGEKMKKKEPVGAMSEDLPADVTKDLTEIVAETLQPLTVNQIKQLRVLIDDAMTENQKS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N E VP+ +EN + R+ G S + + Sbjct: 123 LELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERNFGDCEKRGKYSHVDLIM--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ ++ +SG R LTG LE+AL Q + Y + P +R E M Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHAL-HLLYARDYVPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ D ++LI TSE + + E + SLP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKGSEKAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE+ + L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YRVV++ +G L +A K DLE W G YRE+ SCS C ++Q+RR+ R+ + Sbjct: 360 YRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE + G + +P L+ YM Sbjct: 420 AVDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKKYM 461 >gi|226471434|emb|CAX70798.1| Seryl tRNA Synthetase [Schistosoma japonicum] gi|226489502|emb|CAX75895.1| Seryl tRNA Synthetase [Schistosoma japonicum] gi|226489504|emb|CAX75896.1| Seryl tRNA Synthetase [Schistosoma japonicum] Length = 614 Score = 288 bits (738), Expect = 9e-76, Method: Composition-based stats. Identities = 131/471 (27%), Positives = 211/471 (44%), Gaps = 59/471 (12%) Query: 2 LDIQWIRQN----PEHLDIALKKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + P+ + KR + ++ DE R + + + +N S Sbjct: 3 LDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLCSK 62 Query: 57 QIGQAIAEGNLSL--------------------------VDALKNETSTLKEQLPILEKE 90 I + I + S + LK+ + + E++ Sbjct: 63 AIAKRIKDNEDSPDCEITIFKGVLERLDSLADVDLQPLSIAQLKSLSCFIDEEIKTNAAS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 E+ S + + I N+ +VPI +N++IR+ S H ++ + Sbjct: 123 LIELESIRQHHLYEIGNLLHPDVPISKDEEDNLIIRTF--GKSDFRKPLSHVDLVVMVDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D +R + ++G R L G L LE+A+ + E GYT + P +R EAM Sbjct: 181 FDGERGSMVAGGRGYFLKGPLVFLEQAIINLAL-RMLDERGYTTLYTPFFMRKEAMRAVA 239 Query: 211 QIPKFADDMFCTTDGR--------------------WLIPTSEVSLTNLYSHEIIESKSL 250 Q+ +F ++++ T R +LI TSE + + +E + L Sbjct: 240 QLSQFDEELYKVTGRRELNATANHDSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQL 299 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEE 308 P+++ ++ FR E GS GRDTRG+ R HQF K E IT D S+ + M+S AE Sbjct: 300 PIKYAGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEA 359 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 + L L YR+VS+ +G+L +A YDLE W G +RE+ SCS C ++QSRR+ R+ Sbjct: 360 FYQALKLPYRIVSIVSGELNNAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRF 419 Query: 369 RDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +KS+++ H LN + A R + AILENY G +T+P VLR M Sbjct: 420 GQTKKMNKSVEYVHMLNATMCATTRVICAILENYQTEHG-ITVPDVLRSLM 469 >gi|66509916|ref|XP_396462.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like isoform 1 [Apis mellifera] Length = 496 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 124/462 (26%), Positives = 208/462 (45%), Gaps = 50/462 (10%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R++ P+ + KKR + + ++ D+ R L K +++ +N S Sbjct: 3 LDLDLFRKDKGFDPDKIRENQKKRFKDVGLVDTVIEKDKIWRQLRHKADNLNKLKNVCSK 62 Query: 57 QIGQAIAEGNLSLVDALKNE------------------TSTLK-------EQLPILEKEE 91 +IG+ + + D ++ + +K + + +K Sbjct: 63 EIGEKMKKKEAIDGDDTVSKDILENLENLIPNNLKSLTVAQIKTVRSFIDDAIRTNDKNL 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 + + I N+ E VPI EN + R+ G H ++ + + Sbjct: 123 ILIEFERNHALKEIGNILHESVPISNDEEENKVERTYGDC--MQKKKYSHVDLIYMIDGI 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T +SG R L G L+ AL Q + +GY + P +R + M Q Sbjct: 181 DGERGTTVSGGRGYFLIGPAVFLQHALIQLAL-RKLYINGYKPLYTPFFMRKDVMQEVAQ 239 Query: 212 IPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F ++++ + ++LI TSE + + +E I LP+++ L+ Sbjct: 240 LSQFDEELYKVIGKGSERNEDKEIEEKYLIATSEQPIAAFHRNEWIPENILPIKYAGLST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E +T S+ E M+S AEE K L++ Y Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPYDNKSWQMMEEMISNAEEFYKSLEIPY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKS 375 R+V++ +G L +A K DLE W G N +RE+ SCS C ++Q+RR+ RY + + Sbjct: 360 RIVNIVSGALNNAASKKLDLEAWFPGSNAFRELVSCSNCLDYQARRLLVRYGQTKKMNAN 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + H LN + AV R + AILE + G + +P VL +M Sbjct: 420 TDYVHMLNATMCAVTRVICAILEVHQTDTG-IKVPKVLAQFM 460 >gi|226489506|emb|CAX75897.1| Seryl tRNA Synthetase [Schistosoma japonicum] Length = 614 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 131/471 (27%), Positives = 211/471 (44%), Gaps = 59/471 (12%) Query: 2 LDIQWIRQN----PEHLDIALKKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + P+ + KR + ++ DE R + + + +N S Sbjct: 3 LDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLCSK 62 Query: 57 QIGQAIAEGNLSL--------------------------VDALKNETSTLKEQLPILEKE 90 I + I + S + LK+ + + E++ Sbjct: 63 AIAKRIKDNEDSPDCEITIFKGVLERLDSLADVDLQPLSIAQLKSLSCFIDEEIKTNAAS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 E+ S + + I N+ +VPI +N++IR+ S H ++ + Sbjct: 123 LIELESIRQHHLYEIGNLLHPDVPISKDEEDNLIIRTF--GKSDFRKPLSHVDLVVMVDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D +R + ++G R L G L LE+A+ + E GYT + P +R EAM Sbjct: 181 FDGERGSMVAGGRGYFLKGPLVFLEQAIINLAL-RMLDERGYTTLYTPFFMRKEAMRAVA 239 Query: 211 QIPKFADDMFCTTDGR--------------------WLIPTSEVSLTNLYSHEIIESKSL 250 Q+ +F ++++ T R +LI TSE + + +E + L Sbjct: 240 QLSQFDEELYKVTGRRELNATANHDSQTSENEEEEKYLIATSEQPIAAFHQNEWLPINQL 299 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEE 308 P+++ ++ FR E GS GRDTRG+ R HQF K E IT D S+ + M+S AE Sbjct: 300 PIKYAGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQFCITSPHDNLSWEMFDHMISNAEA 359 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 + L L YR+VS+ +G+L +A YDLE W G +RE+ SCS C ++QSRR+ R+ Sbjct: 360 FYQALKLPYRIVSIVSGELNNAAAMKYDLEGWFPGSGAFRELVSCSNCLDYQSRRLAIRF 419 Query: 369 RDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +KS+++ H LN + A R + AILENY G +T+P VLR M Sbjct: 420 GQTKKMNKSVEYVHMLNATMCATTRVICAILENYQTEHG-ITVPDVLRSLM 469 >gi|330938097|ref|XP_003305681.1| hypothetical protein PTT_18592 [Pyrenophora teres f. teres 0-1] gi|311317187|gb|EFQ86221.1| hypothetical protein PTT_18592 [Pyrenophora teres f. teres 0-1] Length = 509 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 132/465 (28%), Positives = 221/465 (47%), Gaps = 41/465 (8%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +DI+ IRQNP + R+ S+ IL L E+ L + +R R N A + Sbjct: 47 IDIKHIRQNPGLYEQNCIDRNYAAHSKSSWRILELHEQWLELQQSSRSLRERSNRIRAHL 106 Query: 59 GQAIAEGNLSL------VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + + + + E +K +L +E E ++ ++ L +PN+ Sbjct: 107 AKTASRAKDAEGKPVAMREGMIGEAKAIKAELSAVEARETQLQEEIESLAQDLPNLSSTH 166 Query: 113 VPIGTSANENILIRSVG-KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 P+GT + I + + S + H +IG+ LG++DF + + SG + L G Sbjct: 167 TPVGTEPDVLGYINAHPGSEASQSKSQQSHVDIGQELGILDFTGSAQTSGWGWYFLIGDG 226 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-------- 223 A LE+AL Q+ + + T + G+ V+ P LV G P+ + Sbjct: 227 AMLEQALVQYALRVAT-KKGWKAVAPPSLVYSHIASACGFQPRDQNGEQQVYAIEQAEKD 285 Query: 224 ---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 L T+E+ L + + E LPL+ ++ +R+EAG+ G DT+G+ R H+ Sbjct: 286 KAKPQLALAGTAEIPLAGMKVSQTFEESELPLKTVGVSRCYRAEAGARGADTKGLYRVHE 345 Query: 281 FWKCELVSITREED-------------SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 F K E+ + T + S E MLS +EIL+ L LH R++ + + DL Sbjct: 346 FTKVEMFAWTSPDHAGEDHFTAQTTQSSEAIFEEMLSIQKEILEALGLHCRILEMPSTDL 405 Query: 328 GFSACKTYDLEVWLAGQ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLN 383 G SA + D+E + + + E++S S C ++QSRR+ +R R K L+F +TLN Sbjct: 406 GASATRKLDIEAFFPSRQDIDQGWGEVTSTSMCTDYQSRRLQTRMRMKGGK-LEFPYTLN 464 Query: 384 GSGVAVGRCLIAILENYLN-ADGSVTIPTVLRPYMNNLAVIKKEH 427 G+ +AV R L A+LEN+ + + +VTIP VLRP+M I+ + Sbjct: 465 GTALAVPRVLAAMLENHWDSQERTVTIPEVLRPFMGGQEKIRTQG 509 >gi|302668108|ref|XP_003025631.1| hypothetical protein TRV_00198 [Trichophyton verrucosum HKI 0517] gi|291189748|gb|EFE45020.1| hypothetical protein TRV_00198 [Trichophyton verrucosum HKI 0517] Length = 468 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 120/440 (27%), Positives = 205/440 (46%), Gaps = 25/440 (5%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI + +P+ + + ++R + + +++L E R + + +R N+ Sbjct: 1 MLDIADLIPERGGDPKKVKESQRRRFASEELVDEVVALYEDARRTRYEATQVGSRINAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG + + N L E + L+E+ +E + + + I N + VP+ Sbjct: 61 KEIG--MKKRNKEDATDLLAEKAKLEEEKKAIEDRAVQCEQLRDRRLKTIGNYVDDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N ++R+ + H E+ L D +R K+ G R LTG+ Sbjct: 119 DKNEDNNAVLRTWAPPDVKVEKRDCLSHHEVLYRLDGYDPERGVKIVGHRGYCLTGYGLF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRW 227 L AL + ++ GY P + M T Q+ +F ++++ T+ ++ Sbjct: 179 LNLALVNYGLEF-LFNKGYKPNQPPHFMLRNYMAKTAQLEQFDEELYKVTESEDPSTDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE L+ L+ E I K LP + +R EAG+ G+D G+ R HQF K E Sbjct: 238 LIATSEQPLSALHDGEWILEKELP-----INTCYRKEAGAHGKDAWGIFRVHQFEKIEQF 292 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 IT+ E+S+ + M+ +EE K L + Y+V+++ +G L +A K DLE W Q Y Sbjct: 293 LITKPEESWKAFDEMIDTSEEFYKSLKIPYQVIAIVSGALNNAASKKLDLEAWFPFQGEY 352 Query: 348 REISSCSTCGNFQSRRMNSRYRDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++Q+R ++ R+ + H LN + A R L ILENY DG Sbjct: 353 KELVSCSNCTDYQTRELDIRFGSKKLTDVKKNYCHALNATLCATERALCCILENYQQEDG 412 Query: 406 SVTIPTVLRPYM-NNLAVIK 424 + +P VLR Y+ N + Sbjct: 413 -IIVPEVLRKYIPGNPEFLP 431 >gi|114558183|ref|XP_001148704.1| PREDICTED: seryl-tRNA synthetase isoform 7 [Pan troglodytes] Length = 496 Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 115/458 (25%), Positives = 204/458 (44%), Gaps = 44/458 (9%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 +F ++++ I + + L+ E + + LP+++ L+ FR E GS GRDT Sbjct: 241 SQFDEELYKV------IGKGKQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDT 294 Query: 273 RGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFS 330 RG+ R HQF K E + S+ E M++ AEE + L + Y +V++ +G L + Sbjct: 295 RGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHA 354 Query: 331 ACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVA 388 A K DLE W G +RE+ SCS C ++Q+RR+ RY ++F H LN + A Sbjct: 355 ASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCA 414 Query: 389 VGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 R + AILENY G +T+P L+ +M +I Sbjct: 415 TTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 451 >gi|194760604|ref|XP_001962529.1| GF15510 [Drosophila ananassae] gi|190616226|gb|EDV31750.1| GF15510 [Drosophila ananassae] Length = 501 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 124/463 (26%), Positives = 204/463 (44%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + KKR + E ++S D + R + +++ +N S Sbjct: 3 LDLDLFRSDKGGNPDAIRENQKKRFKDLALVETVISKDTEWRQCRHRADNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNL-------------SLVDALKNE------TSTLKE-------QLPILEKE 90 IG+ + + + + E S +K+ + +K Sbjct: 63 VIGEKMKKKEPVGPMSEEVPQAVADNLADITAETLQPLTVSQIKQVRILLDNAMTENQKS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N E VP+ +EN + R+ G S H ++ + Sbjct: 123 LELAEQTRNTALREVGNHLHESVPVSNDEDENRVERTFGDCEKRGKYS--HVDLIVMIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ ++ +SG R LTG LE+AL Q + L YT + P +R E M Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHALQL-LYTKDYTPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ D ++LI TSE + + E + SLP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKGSEKAEEVGVDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE+ + L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YRVV++ +G L +A K DLE W G YRE+ SCS C ++Q+RR+ RY + Sbjct: 360 YRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE + G + +P L+ YM Sbjct: 420 AVDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKKYM 461 >gi|149025695|gb|EDL81938.1| seryl-aminoacyl-tRNA synthetase 1, isoform CRA_a [Rattus norvegicus] Length = 536 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 118/494 (23%), Positives = 206/494 (41%), Gaps = 74/494 (14%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKNE-----------------TSTLK-------EQLPILEKEEH 92 IG+ + + D E S +K E + + E Sbjct: 63 TIGEKMKKKEPVGEDESIPEDVLNFDDLTADTLAALKVSQIKKVRLLVDEAIQKCDGERV 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ + Sbjct: 241 SQFDEELYKVIGKGSEKSDDSSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ + M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS----- 373 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKR 420 Query: 374 ---------------------KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 K ++F H LN + A R + AILENY G + +P Sbjct: 421 KNNLRFSTQNKLEAVSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKG-IVVPEK 479 Query: 413 LRPYM--NNLAVIK 424 LR +M +I Sbjct: 480 LREFMPPGLQELIP 493 >gi|194855292|ref|XP_001968514.1| GG24463 [Drosophila erecta] gi|190660381|gb|EDV57573.1| GG24463 [Drosophila erecta] Length = 501 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 119/463 (25%), Positives = 202/463 (43%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + KKR + E +++ D + R + +++ +N S Sbjct: 3 LDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNL-------------SLVDALKNE------TSTLK-------EQLPILEKE 90 IG+ + + + + E + +K + + +K Sbjct: 63 VIGEKMKKKEPVGAMSEDPPAEVTKDLTEIVAETLQPLTVNQIKQLRVLIDDAMTENQKS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N E VP+ +EN + R+ G S H ++ + Sbjct: 123 LELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERTFGDCEKRGKYS--HVDLIVMIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ ++ +SG R LTG LE+AL Q + Y + P +R E M Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHAL-HLLYARDYVPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ D ++LI TSE + + E + SLP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKGSEKAEEVGIDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE+ + L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YRVV++ +G L +A K DLE W G YRE+ SCS C ++Q+RR+ RY + Sbjct: 360 YRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE + G + +P L+ Y+ Sbjct: 420 AVDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKKYL 461 >gi|332025907|gb|EGI66063.1| Seryl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior] Length = 493 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 50/462 (10%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ + R++ PE + KKR + + + ++ D+ R L + ++ +N S Sbjct: 3 LDLDFFRKDKGFDPEKIRENQKKRFKDVELVDTVIEKDKHWRQLRHRADNFNKLKNLCSK 62 Query: 57 QIGQAIAE----GNLSLVDA---------------------LKNETSTLKEQLPILEKEE 91 +IG+ + G+ V +K + + + + ++ Sbjct: 63 EIGEKMKRKEPLGDDDNVSQAIVDNLDNLTSESLKALTVTQIKKIRTLIDDAIQKNDENL 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 + + N E VP+ EN + R+ G H ++ + M Sbjct: 123 KTTELERNAALREVGNHLHESVPVSNDEEENKVERTWGNC--IDKKKYSHVDLIHMIDGM 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T +SG R LTG L++AL Q + + GY + P ++R +AM Q Sbjct: 181 DGERGTNVSGGRGYFLTGPAIFLQQALIQLAL-RKLFKTGYKPLYTPFIMRKDAMQEVAQ 239 Query: 212 IPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F ++++ + ++LI TSE + + E I +LP+++ ++ Sbjct: 240 LSQFDEELYKVIGKGSERNEDKEMEEKYLIATSEQPIAAFHRGEWIAENALPIKYAGIST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E +T S+ E M+S AE+ + LD+ Y Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKIEQFCLTSPHDNKSWEMMEEMISNAEKFYQALDIPY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKS 375 R+V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + + Sbjct: 360 RIVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNTT 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + H LN + AV R + AILE + G + +P +L YM Sbjct: 420 TDYVHMLNATMCAVTRVICAILEVHQTETG-IKVPKILADYM 460 >gi|91086675|ref|XP_968460.1| PREDICTED: similar to seryl-tRNA synthetase [Tribolium castaneum] Length = 499 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 121/463 (26%), Positives = 200/463 (43%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + + KKR + + ++ D R L K +++ +N S Sbjct: 3 LDLDLFRTDKGGNPDKIRESQKKRFKDVTLVDKVVEADTTWRQLRHKADNLNKFKNLCSK 62 Query: 57 QIGQAIAEGNL-------------SLVDALKNE------TSTLK-------EQLPILEKE 90 +IG + + + ++ L E + +K E + + E Sbjct: 63 EIGDKMKKKEPQGDANDPVPDSLVAQLENLTAELLKPLTVNQIKKVRVLIDEAMVKNDAE 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + I N+ + V I + N + R+ G S + Sbjct: 123 LLRTEKERSAALKEIGNLLHDSVVISDDEDNNKVERTFGDCEFRKKYSHVDLIH--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 +D +R +SG R LTG LE AL Q + + GY + P +R E M Sbjct: 181 VDTERGATISGGRGYFLTGPALFLEHALIQLAL-RMLHKKGYKPLYTPFFMRKEIMQEVA 239 Query: 211 QIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ + ++LI TSE + + E I +LP+++ L+ Sbjct: 240 QLSQFDEELYKVIGKGSEKAEDKEIEEKYLIATSEQPIAAFHRDEWISESALPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M++ AEE K L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPFDNKSWEMMDEMINNAEEFCKALQIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YR+V++ +G L +A K DLE W +RE+ SCS C ++Q+RR+ RY + Sbjct: 360 YRIVNIVSGALNNAAAKKLDLEAWFPASGAFRELVSCSNCLDYQARRLLVRYGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + H LN + A R + AILE + G V +P VL+ ++ Sbjct: 420 ATDYVHMLNATMCATTRVICAILEVHQTETG-VKVPPVLKDFL 461 >gi|145233241|ref|XP_001399993.1| seryl-tRNA synthetase [Aspergillus niger CBS 513.88] gi|134056921|emb|CAK44268.1| unnamed protein product [Aspergillus niger] Length = 501 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 136/461 (29%), Positives = 210/461 (45%), Gaps = 38/461 (8%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IRQNPE R+ +E I L ++ R L + ++ RAR I Sbjct: 42 DIKHIRQNPELYSKNCVDRNYPAHAEYPLKIQQLTDEARRLDQDLKTPRARIKELEKAIA 101 Query: 60 Q---AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + A + S + +L+ E + LK+ + + + +L +PN+ PIG Sbjct: 102 KVASAANNDSSSDLTSLRAEATRLKDDSNNMSTRKTTCTEEIHRLALSLPNLSSTYTPIG 161 Query: 117 TSANENILIRSVGKKPSAIHLSRE----HFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 I + P + H IG LGL+DF + +G + LT A Sbjct: 162 ADPTLINYINFDPQSPPEWVTRPDPNRSHVTIGTKLGLLDFTSSAITTGWGWYFLTNEGA 221 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------- 223 LE+AL Q+ + + HG+ VS P LV G P+ + Sbjct: 222 LLEQALVQYALSV-ARRHGWKAVSPPSLVYSYIAEACGFQPRDQHNEQQIWTIEQTEKDK 280 Query: 224 --DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 R L T+E+ L +++ I + LPLR + +R+EAGS G DT+G+ R H+F Sbjct: 281 SKPQRSLAGTAEIPLAAMHAGRDIPASQLPLRLVGPSRCYRAEAGSRGVDTKGLYRVHEF 340 Query: 282 WKCELVSITRE--------EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 K E+ + S +LS EIL L+L RV+ + T DLG SA + Sbjct: 341 TKVEMFAWADNLPDSTSTTSTSDDLFAELLSIQTEILTALNLPARVLEMPTSDLGASASR 400 Query: 334 TYDLEVWLAGQ-------NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSG 386 D+EV + + + E++S S C ++QSRR+ +R R +K +F HT+NG+ Sbjct: 401 KRDIEVLFPSRLRAGDLESGWGEVTSASICTDYQSRRLGTRVRGGAAKESRFPHTVNGTA 460 Query: 387 VAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKKE 426 +AV R L AILE +A+ G V +P VLR +M L VI ++ Sbjct: 461 MAVPRVLAAILEIGWDAERGVVVVPEVLRGFMGGLEVIGEQ 501 >gi|307180360|gb|EFN68386.1| Seryl-tRNA synthetase, cytoplasmic [Camponotus floridanus] Length = 493 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 50/462 (10%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R++ PE + +KR + Q + ++ D++ R L ++ +N S Sbjct: 3 LDLDLFRKDKGFDPEKIRENQRKRFKDVQLVDTVIEKDKRWRQLRHCADNFNKLKNLCSK 62 Query: 57 QIGQAIAEGNL------------SLVDALKNET-------------STLKEQLPILEKEE 91 +IG+ + + + L +E+ S + + + ++ Sbjct: 63 EIGEKMKKKEPLGDVDDVPRAISDNLADLTSESLKTLTVVQIKKIRSLIDDAIQKNDESL 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 + + N E VP+ EN + R+ G + H ++ + M Sbjct: 123 KTTELERNNALREVGNHLHESVPVSNDEEENKVERTWGDCTER--KTYSHVDLIHMIAGM 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T +SG R LTG L++AL Q + + Y + AP ++R +AM Q Sbjct: 181 DGERGTGVSGGRGYFLTGPAVFLQQALIQLAL-RKLFKRDYVPLYAPFIMRKDAMQEVAQ 239 Query: 212 IPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F ++++ + ++LI TSE + + E I LP+++ ++ Sbjct: 240 LSQFDEELYKVIGKGSERNEDKEMEEKYLIATSEQPIAAFHRGEWIAENVLPIKYAGIST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E +T S+ E M+S AEE + L++ Y Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPYNNKSWEMMEEMISNAEEFYQALEIPY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKS 375 R+V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + + Sbjct: 360 RIVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAT 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + H LN + AV R + AILE + G + +P +L YM Sbjct: 420 TDYVHMLNATMCAVTRVICAILEVHQTETG-IRVPKILAEYM 460 >gi|83317733|ref|XP_731290.1| seryl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL] gi|23491277|gb|EAA22855.1| seryl-tRNA synthetase [Plasmodium yoelii yoelii] Length = 534 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 136/531 (25%), Positives = 228/531 (42%), Gaps = 110/531 (20%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NPE + + K R + + ++ DEK R I K+E+++ N + Sbjct: 3 LDINLFRTEKGGNPEKIKESEKNRFNDVSNVDKVIEYDEKWRKSIFKLEELKKNINLINK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 IG E + V+ LK ++ ++KE++P+++ EE + ++ + N+ +V I Sbjct: 63 TIGNKKKEDKNADVEDLKQKSLSMKEEIPLIQNEEKHLLKQRNMYLAKVGNILSSKVVIN 122 Query: 117 TSANENILIRSVGKKPSAI--------------------------------------HLS 138 + N ++R+ G+ + Sbjct: 123 NDEDHNKIVRTWGECKNYEATDLEKSDINKEDTPNTKREVSNNNDGQNKVSIISEIKKKY 182 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 H+++ +G ++F + ++G R LTG L A+ Q+ I+ YT V P Sbjct: 183 YYHYDLLRKIGGVNFKKGVLVAGHRGYYLTGAGFLLNNAIMQYAINF-LVNKKYTPVYPP 241 Query: 199 LLVRDEAMYGTGQIPKFADDMFCT--------------------------TDGRWLIPTS 232 ++ M ++ F + ++ D +LI TS Sbjct: 242 FFMKKTIMEECAELNDFEETLYKISSSSVASAEDKTIATNSNNVSNEKSNRDDLFLIATS 301 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L L+ E +ES+ LPL++ ++ FR EAG+ G+D RG+LR HQF K E I+ Sbjct: 302 EQPLCALHRDETLESRYLPLKYVGISSCFRKEAGAHGKDIRGILRVHQFDKVEQFCISLP 361 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 + S+ HE M+ EE + L++ Y++V++ +G L +A YD+E + YRE+ S Sbjct: 362 QTSYKLHEEMIKTCEEFYQSLNIPYKIVNIVSGALNNAAALKYDIEGYFPTSGQYRELVS 421 Query: 353 CSTCGNFQSRRMNSRY--------------RDPNSKSLK--------------------- 377 CS C ++QS +N RY +D N ++ K Sbjct: 422 CSNCTDYQSINLNIRYTDSNIKISGITKSSKDKNEENTKDETKDEYVDSEYEKFNHDFPI 481 Query: 378 ----FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 + H LNG+ VA R L +LENY N +G + +P LRPYMNN I Sbjct: 482 ENKNYVHLLNGTMVAGQRFLCCLLENYQNGEG-IIVPEKLRPYMNNTEFIP 531 >gi|289743367|gb|ADD20431.1| seryl-tRNA synthetase [Glossina morsitans morsitans] Length = 495 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 125/459 (27%), Positives = 202/459 (44%), Gaps = 47/459 (10%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + P+ + +KR + E ++S D + R + +++ +N S Sbjct: 3 LDLDLFRSDKGGDPDAVRKNQEKRFKDVGLVETVISEDMEWRQRRHQADNLNKVKNLCSK 62 Query: 57 QIGQAIAEGNL--SLVDALKNE-----------------TSTLKE-------QLPILEKE 90 IG+ + + D + E + +K+ + E Sbjct: 63 VIGEKMKKREPLGDESDEVPAELQSPLTELNVEKLSELSVNQIKKVRLLIDQAMSENESL 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + N E VP+ +EN + R G S H ++ + Sbjct: 123 LQANEQKRNLALREVGNHLHESVPVSNDEDENKVERMYGDCEKQAKYS--HVDLIVMIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ D+ +SG R LTG LE+AL Q + YT + P +R E M Sbjct: 181 MNGDKGAVVSGGRGYFLTGPAVFLEQALIQHAL-HMLYAKNYTPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT--------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFR 262 Q+ +F ++++ D ++LI TSE + + E + +LP+++ L+ FR Sbjct: 240 QLSQFDEELYKVIGKGIEKGDDEKYLIATSEQPIAAYHRDEWLSESALPIKYAGLSTCFR 299 Query: 263 SEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVV 320 E GS GRDTRG+ R HQF K E +T S+ E M+ AE+ K L + YR+V Sbjct: 300 QEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMEEMIGNAEDFCKSLGIPYRIV 359 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKSLKF 378 ++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + S+ + Sbjct: 360 NIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNASVDY 419 Query: 379 THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 H LN + A R + AILE + G VT+P LR YM Sbjct: 420 VHMLNATMCATTRVICAILETHQTETG-VTVPEPLRKYM 457 >gi|225685085|gb|EEH23369.1| seryl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 478 Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats. Identities = 125/461 (27%), Positives = 205/461 (44%), Gaps = 45/461 (9%) Query: 1 MLDI---------QWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRAR 50 MLDI + I ++ E L ++R + + +++L + R ++ Sbjct: 1 MLDIADFVHGPTPEKIAESQERLRENQRRRGAPVEAVDEVVALFKIAREARYEVT----- 55 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 QIG+ I N V L E L +Q + E + + I N Sbjct: 56 ------QIGEKI-NKNKEDVSDLIVEKVELGKQKKDADALATEKELLRDQKLRTIGNYVH 108 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSR---EHFEIGEALGLMDFDRATKLSGARFSVL 167 E+VP + ++N ++ S + H +I L D R TK+ G R L Sbjct: 109 EDVPTSQNEDDNAILSSWAPEGFKEEKPAFCLSHDDILHRLDGFDQKRGTKIFGHRGYCL 168 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-- 225 + L AL + ++ + YT P + + M T Q+ +F ++++ T+ Sbjct: 169 INYGLLLNLALVNYGLEF-LFKKKYTLNQPPYFMLKQFMAKTAQLEQFDEELYKVTENED 227 Query: 226 ----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 R+LI TSE L+ L+S E + LP+++ + +R EAGS G++ G+ R HQF Sbjct: 228 KASERYLIATSEQPLSALHSGEWLHDTDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQF 287 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E IT+ EDS+ + M+ +EE + L L YRVV + +G L +A + DLE W Sbjct: 288 EKIEQFVITKPEDSWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWF 347 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDP----------NSKSLKFTHTLNGSGVAVGR 391 Q Y+E+ SCS C ++QSR + RYR + + H LN + A R Sbjct: 348 PSQGTYKELVSCSNCTDYQSRALEIRYRAKKDSADEKDCSDENKKTYVHALNATLCATER 407 Query: 392 CLIAILENYLNADGSVTIPTVLRPYMNNL--AVIKKEHILE 430 L +LENY G + +P VLR Y+ ++ + ++E Sbjct: 408 TLCCLLENYQTETG-IIVPEVLRKYIPGQPTEILYTKDLVE 447 >gi|62896913|dbj|BAD96397.1| seryl-tRNA synthetase variant [Homo sapiens] Length = 514 Score = 287 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 119/470 (25%), Positives = 210/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE+ + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEELYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSSSHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G +T+P L+ +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 469 >gi|270010395|gb|EFA06843.1| hypothetical protein TcasGA2_TC009786 [Tribolium castaneum] Length = 529 Score = 287 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 121/463 (26%), Positives = 200/463 (43%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + + KKR + + ++ D R L K +++ +N S Sbjct: 3 LDLDLFRTDKGGNPDKIRESQKKRFKDVTLVDKVVEADTTWRQLRHKADNLNKFKNLCSK 62 Query: 57 QIGQAIAEGNL-------------SLVDALKNE------TSTLK-------EQLPILEKE 90 +IG + + + ++ L E + +K E + + E Sbjct: 63 EIGDKMKKKEPQGDANDPVPDSLVAQLENLTAELLKPLTVNQIKKVRVLIDEAMVKNDAE 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + I N+ + V I + N + R+ G S + Sbjct: 123 LLRTEKERSAALKEIGNLLHDSVVISDDEDNNKVERTFGDCEFRKKYSHVDLIH--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 +D +R +SG R LTG LE AL Q + + GY + P +R E M Sbjct: 181 VDTERGATISGGRGYFLTGPALFLEHALIQLAL-RMLHKKGYKPLYTPFFMRKEIMQEVA 239 Query: 211 QIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ + ++LI TSE + + E I +LP+++ L+ Sbjct: 240 QLSQFDEELYKVIGKGSEKAEDKEIEEKYLIATSEQPIAAFHRDEWISESALPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M++ AEE K L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPFDNKSWEMMDEMINNAEEFCKALQIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YR+V++ +G L +A K DLE W +RE+ SCS C ++Q+RR+ RY + Sbjct: 360 YRIVNIVSGALNNAAAKKLDLEAWFPASGAFRELVSCSNCLDYQARRLLVRYGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + H LN + A R + AILE + G V +P VL+ ++ Sbjct: 420 ATDYVHMLNATMCATTRVICAILEVHQTETG-VKVPPVLKDFL 461 >gi|221052754|ref|XP_002261100.1| seryl-trna synthetase [Plasmodium knowlesi strain H] gi|194247104|emb|CAQ38288.1| seryl-trna synthetase, putative [Plasmodium knowlesi strain H] Length = 597 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 141/544 (25%), Positives = 232/544 (42%), Gaps = 123/544 (22%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R+ NP+ + + +KR + + ++ DEK R I K+E+++ N + Sbjct: 53 LDINLFRKEKGGNPDKIKESERKRFHDETNVDKVIEYDEKWRKCIFKLEELKKNINLVNK 112 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +IG E + V+ LK ++ T+KE++P L+ E ++ K +S + N+ ++V I Sbjct: 113 EIGNKKKEDKNANVEDLKKKSLTMKEEIPQLQNLERDLLKQRNKYLSKVGNLLNKDVVIS 172 Query: 117 TSANENILIRSVGKKPSAIHLSRE------------------------------------ 140 + N ++ + G ++ E Sbjct: 173 NDEDNNKVVTTWGVCKRLEVITDESSEENKSGKGGSKDGGSNKREVPSSSSISGGVVHPN 232 Query: 141 ----------HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 HF++ +G +F + +++G R LTG L A+ Q+ I+ S++ Sbjct: 233 SSIEGKKYYYHFDLLRKIGGANFKKGIQVAGHRGYYLTGAGFLLHNAILQYAINFLVSKN 292 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------------------------- 222 YT V P ++ M ++ F + ++ Sbjct: 293 -YTPVYPPFFMKKNIMEECAELDDFEETLYKIASSGGNSTATTGTASGAPVSKNLNQNDE 351 Query: 223 --TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 D +LI TSE L L+ E IESK LPL++ ++ FR EAG+ G+D RG+LR HQ Sbjct: 352 LSRDDLFLIATSEQPLCALHKDETIESKYLPLKYAGVSSCFRKEAGAHGKDIRGILRVHQ 411 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E ++ + S H++M+ EE + L++ YR+VS+ +G L +A YDLE + Sbjct: 412 FDKIEQFCLSLPQTSSKVHKQMMKTCEEFYQSLNIPYRIVSIVSGALNNAAAIKYDLEGY 471 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRY-------------RDPNSKSLKF--------- 378 N YRE+ SCS C ++QS +N +Y R + Sbjct: 472 FPSSNQYRELVSCSNCTDYQSNNLNVKYVDSSVRITDVKEDRKKKENTGDHQDDDDDDEI 531 Query: 379 ------------------THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL 420 H LNG+ VA R L +LENY N +G + +P LRPYMNN+ Sbjct: 532 GSDHEEFLKNFHTESRNNVHLLNGTMVAAQRFLCCLLENYQNGEG-IVVPEKLRPYMNNV 590 Query: 421 AVIK 424 I Sbjct: 591 DFIP 594 >gi|15828505|ref|NP_325865.1| seryl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP] gi|18202667|sp|Q98RH5|SYS_MYCPU RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|14089447|emb|CAC13207.1| SERYL-TRNA SYNTHETASE (SERINE--TRNA LIGASE) [Mycoplasma pulmonis] Length = 421 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 147/428 (34%), Positives = 234/428 (54%), Gaps = 10/428 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ I NP++ L + + ++ + +K L++K + ++A+ N S Sbjct: 1 MLDLKKILNNPDYYRNILLNKKANISLFDELVKIGKKRGELMQKSQSLKAKINELSKSFI 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV-PLEEVPIGTS 118 + + LK + S +K++ EK+ + + L++ +PN+ + Sbjct: 61 KLK---TNEEKNELKAKISKIKKEQEQKEKKSELIDDRVFFLLANLPNIILDDVPFGEDE 117 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + ++ + I H++I E GL+DF RA+KLSG RF + A L RAL Sbjct: 118 NSNIVIEKKENLGNGLIVHDFSHYDIAEKFGLVDFKRASKLSGPRFVIFKNQGAKLARAL 177 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 FM+D + + GY E+ P +V+ ++GTGQ+PKF +D+F +G +LIPT+EV +TN Sbjct: 178 MDFMLDTNI-QKGYKEILPPFIVKGHNLFGTGQLPKFEEDLFKLENGMYLIPTAEVPVTN 236 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 Y+ EII P F + FRSEAGS G+D RG++R HQF K E+V IT E+D E Sbjct: 237 YYNDEIIN-LDKPKMFVSFTECFRSEAGSGGKDNRGLIRSHQFKKVEIVKITNEQDGIKE 295 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+ + A +L+ L++ Y+ V LC+GD FS+ KT DLE+WL + +RE SS S G+ Sbjct: 296 FEKTIEDASHLLELLEIPYQKVLLCSGDTSFSSMKTIDLELWLPSEKRFRETSSISYFGD 355 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE-NYLNADGSVTIPTVLRPYM 417 FQ RR RY+ + F HT+NGS +A+ R A++E NY + + + IP L PY Sbjct: 356 FQGRRAKIRYKQND--KTYFAHTINGSALAIDRVFAALIELNYDSKNELIKIPEKLVPYF 413 Query: 418 NNLAVIKK 425 + + +K Sbjct: 414 GSSQIARK 421 >gi|322792298|gb|EFZ16282.1| hypothetical protein SINV_03374 [Solenopsis invicta] Length = 493 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 125/462 (27%), Positives = 212/462 (45%), Gaps = 50/462 (10%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ + R++ PE + KKR + Q + ++ D+ R L + ++ +N S Sbjct: 3 LDLDFFRKDKGFDPEKIRDNQKKRFKDVQLVDTVIEKDKYWRQLRHRADNFNKLKNLCSK 62 Query: 57 QIGQAIAEGNL------------SLVDALKNE------TSTLK-------EQLPILEKEE 91 +IG+ + + +D L +E + +K E + ++ Sbjct: 63 EIGEKMKKKEPLGDDDTVPQAITDDLDNLTSESLKMLTVTQIKRIRTLIDEAIQKNDENL 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 + + N E VP+ EN + R+ G + H ++ + M Sbjct: 123 KATELERNNALREVGNHLHESVPVSEDEEENKVERTWGDC--SFKKKYSHVDLIHMIDGM 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T +SG R LTG L++AL Q + + GY + P +R +AM Q Sbjct: 181 DGERGTGVSGGRGYFLTGPAVLLQQALIQLAL-RKLFKKGYKPLYTPFTMRKDAMQEVAQ 239 Query: 212 IPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F ++++ + ++LI TSE + + E + +LP+++ ++ Sbjct: 240 LSQFDEELYKVIGKGSERNEDKEMEEKYLIATSEQPIAAFHRGEWLAENTLPIKYAGIST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E +T S+ E M+S AEE + LD+ Y Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMISNAEEFYQALDIPY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKS 375 R+V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + + Sbjct: 360 RIVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNTT 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + H LN + AV R + AILE + G + +P +L YM Sbjct: 420 TDYVHMLNATMCAVTRVICAILEVHQTETG-IKVPKILADYM 460 >gi|39942300|ref|XP_360687.1| hypothetical protein MGG_03230 [Magnaporthe oryzae 70-15] gi|145015779|gb|EDK00269.1| hypothetical protein MGG_03230 [Magnaporthe oryzae 70-15] Length = 532 Score = 286 bits (732), Expect = 5e-75, Method: Composition-based stats. Identities = 134/469 (28%), Positives = 214/469 (45%), Gaps = 46/469 (9%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +D++ IRQNP + +R+ + QS I +L E+ ++ +R R N Q+ Sbjct: 64 IDLKHIRQNPALYEQNCVERNYKSQSTYPVRINALFEQWHERQREGRTLRERSNLLRRQL 123 Query: 59 GQAIAEGNLSL-----------VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 A + + L E LK+QL +E E + + L +PN Sbjct: 124 ANPSASLTEAPDPRFQDLTNMSREELLEEGKRLKDQLSSIEDSEARLEDEMHSLGLALPN 183 Query: 108 VPLEEVPIGTSANENILIRSVGKKP--------SAIHLSREHFEIGEALGLMDFDRATKL 159 + P G+ I P + + R H IG LG+MDF A Sbjct: 184 LTSTSTPRGSEPLVLSYINVENDDPTALLESTGKSDRVWRSHVHIGSELGIMDFAGAATA 243 Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD-- 217 SG + L G A LE+AL Q+ + + T HG+T+VS P +V G P+ + Sbjct: 244 SGWGWYYLVGEGAALEQALVQYALAVAT-RHGWTQVSPPSIVYSHIAGACGFQPRDHNGE 302 Query: 218 -----------DMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 D L T+E+ L + + +E L +R ++ +R+EAG Sbjct: 303 TQIYNLAQSASDAERGRPELCLAATAEIPLAGMKADTQLEESELSMRRVAVSRCYRAEAG 362 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSF--TEHERMLSCAEEILKRLDLHYRVVSLCT 324 + G DT+G+ R H+F K E+ + T ++S + ML EIL L L RV+ + + Sbjct: 363 ARGVDTKGLYRVHEFTKVEMFAWTSPDESETLDVFDEMLDIQTEILGALGLSCRVLEMPS 422 Query: 325 GDLGFSACKTYDLEVWLAGQ-----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFT 379 DLG SA + D+E + + + + E++S S C ++Q+RR+ +R R + + Sbjct: 423 TDLGASATRKNDIEAFFPSRRLLRDDGWGEVTSASICTDYQTRRLATRVRVA--GKMTYP 480 Query: 380 HTLNGSGVAVGRCLIAILENYLNADG-SVTIPTVLRPYMNNLAVIKKEH 427 T+NG+ +AV R L AILEN + D +VTIP VLRP+M+ I +H Sbjct: 481 WTVNGTALAVPRVLAAILENGWDEDSMTVTIPEVLRPWMDGKEKIGPKH 529 >gi|157108382|ref|XP_001650201.1| seryl-tRNA synthetase [Aedes aegypti] gi|108879307|gb|EAT43532.1| seryl-tRNA synthetase [Aedes aegypti] Length = 500 Score = 286 bits (732), Expect = 5e-75, Method: Composition-based stats. Identities = 124/463 (26%), Positives = 204/463 (44%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + P + + R + + ++ D + R ++ +N S Sbjct: 3 LDLDLFRSDKGHDPAKVRANQELRFKDVGLVDTVIEQDGEWRKCRFNADNFNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDA-------------LKNE------TSTLKE-------QLPILEKE 90 +IG+ + + + LK+E + +K+ + EK+ Sbjct: 63 EIGEKMKKKEPQGAEDEPVPEAVATDLLGLKSEDLKALTVNQIKKVRGLIDSAMVENEKK 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 E + + + N E VP+ +EN + R+ G + S + + Sbjct: 123 LSEAEAKRNSALREVGNHLHESVPVSNDEDENKVERTFGDCEKKLKYSHVDLIV--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ ++ +SG R LTG LE+AL Q + GYT + P +R E M Sbjct: 181 MNGEKGAVVSGGRGYFLTGPAVFLEQALIQHSL-HLLYGKGYTPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ D ++LI TSE + + E I SLP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKGSEKTEEGVSDEKYLIATSEQPIAAYHRDEWIPEASLPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE+ + L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YRVV++ +G L +A K DLE W AG +RE+ SCS C ++Q+RR+ RY + Sbjct: 360 YRVVNIVSGALNHAASKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + F H LN + A R + AILE + G V +P L+ YM Sbjct: 420 AVDFVHMLNATMCATTRVICAILETHQTETG-VKVPEPLKKYM 461 >gi|125986127|ref|XP_001356827.1| GA14420 [Drosophila pseudoobscura pseudoobscura] gi|195148460|ref|XP_002015192.1| GL19573 [Drosophila persimilis] gi|54645153|gb|EAL33893.1| GA14420 [Drosophila pseudoobscura pseudoobscura] gi|194107145|gb|EDW29188.1| GL19573 [Drosophila persimilis] Length = 501 Score = 286 bits (731), Expect = 6e-75, Method: Composition-based stats. Identities = 118/463 (25%), Positives = 199/463 (42%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP + KKR + E ++ D + R + +++ +N S Sbjct: 3 LDLDLFRSDKGGNPNAVRDNQKKRFKDVALVETVIEKDTEWRQCRHRADNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNLSLV--------------------------DALKNETSTLKEQLPILEKE 90 IG+ + + + +K + + + +K Sbjct: 63 VIGEKMKKKEPVGAVSEELPAAVTTSLTEIVPETLQPLTVNQIKQLRVLIDDAMTENQKS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N + VP+ EN + R+ G S H ++ + Sbjct: 123 LELAEQTRNTSLREVGNHLHDSVPVSNDEEENRVERTFGDCEKRGKYS--HVDLIVMIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ ++ + +SG R LTG LE+AL Q + Y + P +R E M Sbjct: 181 MNAEKGSVVSGGRGYFLTGAAVFLEQALIQHAL-HLLYAKDYVPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ TD ++LI TSE + + E + SLP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKGSEKAEEAGTDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE+ + L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YRVV++ +G L +A K DLE W G YRE+ SCS C ++Q+RR+ R+ + Sbjct: 360 YRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE + G + +P L+ YM Sbjct: 420 AVDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKKYM 461 >gi|259485944|tpe|CBF83395.1| TPA: beta-1,4-glucosidase/seryl tRNA synthase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 478 Score = 286 bits (731), Expect = 6e-75, Method: Composition-based stats. Identities = 128/459 (27%), Positives = 208/459 (45%), Gaps = 40/459 (8%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ +R+N E + R+ +E I L E+ R + K++ R+R + IG Sbjct: 24 NVKHVRENAELYAQNCRDRNYPAHAEYPFKIQQLSEELRQIDKQLMPFRSRIKALERTIG 83 Query: 60 Q----AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + A A++ E LK + L + L +PN+ P+ Sbjct: 84 RLQNPATGPEEKEQEPAIRAEAQQLKNESAALITRRELCDEQIHDLALSLPNLTSPHTPV 143 Query: 116 GTSANENILIRSVGKKPSAIHLSRE----HFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 G + + P A S + H IG LGL+DF A +G + LTG Sbjct: 144 GLEPALVEYLNFDPQSPPAWVSSPDPLRSHVSIGTDLGLIDFTSAATTTGWGWYFLTGDG 203 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-------- 223 A LE+AL Q+ + + HG+T +S P +V G P+ ++ Sbjct: 204 ALLEQALIQYSLSV-ARRHGWTPISPPSIVWSYLTEACGFQPRDQNNEQQIWAIEQAEKD 262 Query: 224 ---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 R L T+E+ L +++ ++ +LP++ + +R+EAGS G DT+G+ R H+ Sbjct: 263 KAKPPRSLAATAEIPLAAMHARNELDPAALPIKLVGPSRCYRAEAGSRGVDTKGLYRVHE 322 Query: 281 FWKCELVSITREEDSFTE------HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 F K E+ + + E +L+ +EIL L L R++ + T DLG SA + Sbjct: 323 FTKVEMFGWADSSPTSSSPTSDDLFEGLLTVQKEILTSLQLPCRILEMPTSDLGASATRK 382 Query: 335 YDLEVWLAGQ-------NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGV 387 D+E + + + E++S S C ++QSRR+ +R R F HT+NG+ V Sbjct: 383 RDIEALFPSRMRGNGLEDAWGEVTSASICTDYQSRRLGTRVR---GVKSVFPHTVNGTAV 439 Query: 388 AVGRCLIAILENYLNADGSVTI-PTVLRPYMNNLAVIKK 425 AV R L AILEN +A+ V + P VLRP+M VI K Sbjct: 440 AVPRVLAAILENGWDAERKVVVLPEVLRPFMGGAEVIGK 478 >gi|195433819|ref|XP_002064904.1| GK14956 [Drosophila willistoni] gi|194160989|gb|EDW75890.1| GK14956 [Drosophila willistoni] Length = 502 Score = 286 bits (731), Expect = 6e-75, Method: Composition-based stats. Identities = 122/463 (26%), Positives = 202/463 (43%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + KKR + E ++S D + R + +++ +N S Sbjct: 3 LDLDLFRSDKGFNPDAVRDNQKKRFKDVALVETVISKDTEWRQCRHRADNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNL-------------SLVDALKNE------TSTLKE-------QLPILEKE 90 IG+ + + + + E S +K+ + +K Sbjct: 63 VIGEKMKKKEPVGAMSEELPAALCENLTEIVAETLQPLTVSQIKQLRIVIDNAMVDNQKS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N E VP+ +EN + R+ G S + + Sbjct: 123 LEVAEQTRNTALREVGNHLHESVPVSNDEDENKVERTYGDCEKRSKYSHVDLIV--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ ++ +SG R LTG LE+AL Q + Y + P +R E M Sbjct: 181 MNSEKGAVVSGGRGYFLTGPAVFLEQALIQHSL-HLLYAKDYVPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ TD ++LI TSE + + E + SLP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKGSEKAEEAGTDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE+ + L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SK 374 YRVV++ +G L +A K DLE W G YRE+ SCS C ++Q+RR+ RY + Sbjct: 360 YRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNA 419 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 S+ + H LN + A R + AILE + G + +P L+ +M Sbjct: 420 SVDYVHMLNATLCAATRVICAILETHQTETG-IKVPEPLKKFM 461 >gi|67525297|ref|XP_660710.1| hypothetical protein AN3106.2 [Aspergillus nidulans FGSC A4] gi|40744501|gb|EAA63677.1| hypothetical protein AN3106.2 [Aspergillus nidulans FGSC A4] Length = 1679 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 128/459 (27%), Positives = 208/459 (45%), Gaps = 40/459 (8%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ +R+N E + R+ +E I L E+ R + K++ R+R + IG Sbjct: 1225 NVKHVRENAELYAQNCRDRNYPAHAEYPFKIQQLSEELRQIDKQLMPFRSRIKALERTIG 1284 Query: 60 Q----AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + A A++ E LK + L + L +PN+ P+ Sbjct: 1285 RLQNPATGPEEKEQEPAIRAEAQQLKNESAALITRRELCDEQIHDLALSLPNLTSPHTPV 1344 Query: 116 GTSANENILIRSVGKKPSAIHLSRE----HFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 G + + P A S + H IG LGL+DF A +G + LTG Sbjct: 1345 GLEPALVEYLNFDPQSPPAWVSSPDPLRSHVSIGTDLGLIDFTSAATTTGWGWYFLTGDG 1404 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-------- 223 A LE+AL Q+ + + HG+T +S P +V G P+ ++ Sbjct: 1405 ALLEQALIQYSLSV-ARRHGWTPISPPSIVWSYLTEACGFQPRDQNNEQQIWAIEQAEKD 1463 Query: 224 ---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 R L T+E+ L +++ ++ +LP++ + +R+EAGS G DT+G+ R H+ Sbjct: 1464 KAKPPRSLAATAEIPLAAMHARNELDPAALPIKLVGPSRCYRAEAGSRGVDTKGLYRVHE 1523 Query: 281 FWKCELVSITREEDSFTE------HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 F K E+ + + E +L+ +EIL L L R++ + T DLG SA + Sbjct: 1524 FTKVEMFGWADSSPTSSSPTSDDLFEGLLTVQKEILTSLQLPCRILEMPTSDLGASATRK 1583 Query: 335 YDLEVWLAGQ-------NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGV 387 D+E + + + E++S S C ++QSRR+ +R R F HT+NG+ V Sbjct: 1584 RDIEALFPSRMRGNGLEDAWGEVTSASICTDYQSRRLGTRVR---GVKSVFPHTVNGTAV 1640 Query: 388 AVGRCLIAILENYLNADGSVTI-PTVLRPYMNNLAVIKK 425 AV R L AILEN +A+ V + P VLRP+M VI K Sbjct: 1641 AVPRVLAAILENGWDAERKVVVLPEVLRPFMGGAEVIGK 1679 >gi|159119702|ref|XP_001710069.1| Seryl-tRNA synthetase [Giardia lamblia ATCC 50803] gi|157438187|gb|EDO82395.1| Seryl-tRNA synthetase [Giardia lamblia ATCC 50803] Length = 457 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 119/453 (26%), Positives = 206/453 (45%), Gaps = 42/453 (9%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NPE + + ++R+ + + ++ LD+ + + N + Sbjct: 3 LDINLFRVSKGGNPEKVKESQRRRYASTEIVDKVIELDKAWVSKDYEASQLSKELNQLNK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 G A+ + + D L + + K++ ++KE ++ + +++ I N+ + V + Sbjct: 63 DFGAAMKAKSPT--DELSKKIAANKQETERVKKEVGQLLAERNAVLNTIGNIVCDAVVVD 120 Query: 117 TSANENILIRSV------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + N ++ + P+ + + H + +MD R K+SG R LTG+ Sbjct: 121 NNEDNNKVVYTNDAVVRANPSPNGVEKTLNHVTLMTNCRMMDCPRGVKISGNRGYFLTGY 180 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRW 227 A L +AL Q+ + T + GY + P + EAM Q+ F + ++ + + ++ Sbjct: 181 GALLNQALIQYALKFLT-DRGYQAMQTPFFMEQEAMSCCCQLEDFDEQLYKVSGEGNDKY 239 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPL----------------------RFTTLAPSFRSEA 265 LI TSE L + EII R+ ++ FR E Sbjct: 240 LIATSEQPLCAYHMGEIINFSKQGQIAELTYNSIKTGKQEKKTLECIRYAGMSTCFRKEV 299 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 G G DT G+ R HQF K E + + +EEDS+ E M+ L + YRVV + +G Sbjct: 300 GRHGHDTLGIFRIHQFEKIEQIVVCKEEDSWDMMEYMIDNCRAFFDSLMIPYRVVIIVSG 359 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS 385 L +A YDLE + G N YRE+ SCS C ++QSR ++ +Y+D K K+ H LN + Sbjct: 360 ALNNAAAMKYDLEAYFPGSNTYRELVSCSNCTDYQSRSLDIKYQD--GKDKKYVHLLNST 417 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 A R L ++ENY G + +P L+ Y+ Sbjct: 418 LSATERTLCCLVENYQTPTG-IKVPVPLQSYVG 449 >gi|73959365|ref|XP_866257.1| PREDICTED: similar to seryl-tRNA synthetase isoform 6 [Canis familiaris] Length = 532 Score = 285 bits (730), Expect = 8e-75, Method: Composition-based stats. Identities = 115/488 (23%), Positives = 208/488 (42%), Gaps = 68/488 (13%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVRADGEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKN----------------ETSTLK-------EQLPILEKEEHE 93 IG+ + + +++ + S +K E + + E + Sbjct: 63 TIGEKMKKKEPVGDESIPEDALNLDDLTADTLANLKVSQIKKVRLLIDEAILKCDAERIK 122 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 + + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 LEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFEG 181 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 EKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQLS 240 Query: 214 KFADDMFCT-------------------------------TDGRWLIPTSEVSLTNLYSH 242 +F ++++ D ++LI TSE + L+ Sbjct: 241 QFDEELYKVSSLGITGPHSESLGWHFLPNNLSFEKSDDNSYDEKYLIATSEQPIAALHRD 300 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHE 300 E + + LP+++ L+ FR E GS GRDTRG+ R HQF K E + S+ E Sbjct: 301 EWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFE 360 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 M++ AE+ + L + Y +V++ +G L +A K DLE W G +RE+ SCS C ++Q Sbjct: 361 EMITTAEDFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQ 420 Query: 361 SRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM- 417 +RR+ RY ++F H LN + A R + AILENY G + +P L+ +M Sbjct: 421 ARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-IVVPEKLKEFMP 479 Query: 418 -NNLAVIK 424 +I Sbjct: 480 PGLQELIP 487 >gi|281341624|gb|EFB17208.1| hypothetical protein PANDA_007865 [Ailuropoda melanoleuca] Length = 536 Score = 285 bits (730), Expect = 8e-75, Method: Composition-based stats. Identities = 115/492 (23%), Positives = 208/492 (42%), Gaps = 72/492 (14%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADGEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKN----------------ETSTLK-------EQLPILEKEEHE 93 IG+ + + +++ + S +K E + + E + Sbjct: 63 TIGEKMKKKEPVGDESIPEDVLNLDDLTADTLANLKVSQIKKVRLLIDEAILKCDAERIK 122 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 + + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 LEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTIRKK-YSHVDLVVMVDGFEG 181 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 EKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQLS 240 Query: 214 KFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ F Sbjct: 241 QFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCF 300 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRV 319 R E GS GRDTRG+ R HQF K E + S+ E M++ AE+ + L + Y + Sbjct: 301 RQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHI 360 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS------ 373 V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 VNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKIK 420 Query: 374 -------------------KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 ++F H LN + A R + AILENY G + +P L+ Sbjct: 421 NNPHLSTEDTLKAVSSLSLGKVEFVHMLNATMCATTRTICAILENYQTEKG-IVVPEKLK 479 Query: 415 PYM--NNLAVIK 424 +M +I Sbjct: 480 EFMPPGLQELIP 491 >gi|119576775|gb|EAW56371.1| seryl-tRNA synthetase, isoform CRA_g [Homo sapiens] Length = 521 Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 120/477 (25%), Positives = 211/477 (44%), Gaps = 57/477 (11%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILI-------KKIEDIRA 49 LD+ R +P + +KR +P + ++ D + R + + +++ Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRFLDSLFLGRFRADNLNK 62 Query: 50 RRNSNSAQIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLP 85 +N S IG+ + + + DAL N + S +K E + Sbjct: 63 LKNLCSKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAIL 122 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 + E ++ + + + I N+ VPI + + + + + H ++ Sbjct: 123 KCDAERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLV 181 Query: 146 EALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEA 205 + + ++ ++G+R L G L LE+AL Q+ + GY + P +R E Sbjct: 182 VMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEV 240 Query: 206 MYGTGQIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLR 253 M Q+ +F ++++ D ++LI TSE + L+ E + + LP++ Sbjct: 241 MQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIK 300 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILK 311 + L+ FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + Sbjct: 301 YAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQ 360 Query: 312 RLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDP 371 L + Y +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 SLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQT 420 Query: 372 NSK--SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 ++F H LN + A R + AILENY G +T+P L+ +M +I Sbjct: 421 KKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 476 >gi|195386010|ref|XP_002051697.1| GJ10873 [Drosophila virilis] gi|194148154|gb|EDW63852.1| GJ10873 [Drosophila virilis] Length = 501 Score = 285 bits (729), Expect = 9e-75, Method: Composition-based stats. Identities = 121/463 (26%), Positives = 201/463 (43%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + KKR + E ++ D + R + +++ +N S Sbjct: 3 LDLDLFRSDKGGNPDAVRDNQKKRFKDVALVETVIEKDTEWRQRRHRADNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNLS--------------------------LVDALKNETSTLKEQLPILEKE 90 IG+ + + V+ +K + + + +K Sbjct: 63 VIGEKMKKKEPVGSEGEEVPAAIRTDLTQVTADTLQPLTVNQIKQLRLLIDDAMTENQKA 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N E VP+ +EN + R+ G S H ++ + Sbjct: 123 LELAEQTRNTALREVGNHLHESVPVSNDEDENRVERTFGDCQKRGKYS--HVDLIVMIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ ++ +SG R LTG LE+AL Q + Y + P +R E M Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHAL-HLLYARDYVPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ TD ++LI TSE + + E + SLP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKGSERAEESGTDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE+ + L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YRVV++ +G L +A K DLE W G YRE+ SCS C ++Q+RR+ RY + Sbjct: 360 YRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE + G V +P L+ +M Sbjct: 420 AVDYVHMLNATMCAATRVICAILETHQTETG-VKVPEPLKKFM 461 >gi|328670885|gb|AEB26319.1| seryl-tRNA synthetase [Helicoverpa armigera] Length = 491 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 120/463 (25%), Positives = 199/463 (42%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + KKR + + ++ D R L + ++ +N S Sbjct: 3 LDLDLFRADKDGNPDKIRENQKKRFKDVALVDTVVEQDTLWRRLRHEADNYNKLKNVCSK 62 Query: 57 QIGQAIAEGNL----------SLVDAL---------------KNETSTLKEQ-LPILEKE 90 +IG + + + L + L ++ + E+ Sbjct: 63 EIGLKMKSKEPVGPEDQPVPAEIAEKLVDLTGDDLKPLTVNQIKKVRVLIDEAIAKNEQG 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N E VP+ + N + R+ G S + Sbjct: 123 LIAAEKARSAALREVGNHLHESVPVDDDEDHNKVERTHGDCTFRTKYSHVDLIC--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 MD DR + ++G R L G LE+AL Q + + + GYT + P +R E M Sbjct: 181 MDGDRGSAVAGGRGYYLKGAAVFLEQALIQLSLRILL-KKGYTPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ F ++++ + ++LI TSE + + E + SLP+R+ L+ Sbjct: 240 QLAHFDEELYKVVGKGSENKGDVAIEEKYLIATSEQPIAAYHRDEWLPEASLPIRYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M++ AEE + LD+ Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMITNAEEFYQLLDIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YRVV++ +G L +A K DLE W G +RE+ SCS C +Q+RR+ RY + Sbjct: 360 YRVVNIVSGALNHAAAKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++ H LN + A R + A+LE +G + +P L+ +M Sbjct: 420 ATEYVHMLNATMCATTRVICAVLEVNQTEEG-IKVPEALKQWM 461 >gi|111494145|gb|AAI11399.1| SARS protein [Homo sapiens] Length = 511 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 119/470 (25%), Positives = 208/470 (44%), Gaps = 53/470 (11%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G +T+P +M +I Sbjct: 421 EFVHMLNATMCATTRTICAILENYQTEKG-ITVPE---KFMPPGLQELIP 466 >gi|114558181|ref|XP_001148144.1| PREDICTED: seryl-tRNA synthetase isoform 2 [Pan troglodytes] Length = 521 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 120/477 (25%), Positives = 211/477 (44%), Gaps = 57/477 (11%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILI-------KKIEDIRA 49 LD+ R +P + +KR +P + ++ D + R + + +++ Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRFLDSLFLGRFRADNLNK 62 Query: 50 RRNSNSAQIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLP 85 +N S IG+ + + + DAL N + S +K E + Sbjct: 63 LKNLCSKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAIL 122 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 + E ++ + + + I N+ VPI + + + + + H ++ Sbjct: 123 KCDAERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLV 181 Query: 146 EALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEA 205 + + ++ ++G+R L G L LE+AL Q+ + GY + P +R E Sbjct: 182 VMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEV 240 Query: 206 MYGTGQIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLR 253 M Q+ +F ++++ D ++LI TSE + L+ E + + LP++ Sbjct: 241 MQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIK 300 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILK 311 + L+ FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + Sbjct: 301 YAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQ 360 Query: 312 RLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDP 371 L + Y +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 SLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQT 420 Query: 372 NSK--SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 ++F H LN + A R + AILENY G +T+P L+ +M +I Sbjct: 421 KKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 476 >gi|269986482|gb|EEZ92767.1| seryl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 430 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 135/431 (31%), Positives = 225/431 (52%), Gaps = 15/431 (3%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEY----ILSLDEKNRILIKKIEDIRARRNSNSAQI 58 D+ ++R + E L ++KKR L P E ++ L+E + ++++R +RN S + Sbjct: 4 DLNYVRDHKEELLSSIKKRFLNPPVEKPVERLIELNEIIKKNRSDVDELRHKRNVISKEF 63 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + + D + + +Q+ LE E + K L +PN+ E P G Sbjct: 64 AENK--EDNQTKDEERKTVREIMQQIKTLEDEITKYEEEAKNLFLWLPNIVSPEAPEGKD 121 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+N+ IR+ GK +++ H ++G L+D + A K++G+RF + G L LE AL Sbjct: 122 DNDNVEIRNYGKIEKRDFVTKSHIDLGLERRLLDIENAAKITGSRFVFIKGKLVQLELAL 181 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-------TDGRWLIPT 231 + I+ + GY + P ++ + G + F D ++ + R+LI T Sbjct: 182 EMYSIE-KIASKGYLPLMPPFMIIRDIYGGIAHMATFEDALYKVTGIEEEGEEERFLIST 240 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +E L YS+ I + LP++ ++P+FR EAG+ G+DT+G+ R HQF + E + + + Sbjct: 241 TEHPLIAQYSNSNIPEEELPIKLVGISPAFRKEAGAHGKDTKGIFRLHQFDQTEQIVLCK 300 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS HE ML+ EEI K L + YRVVS TGD+G K YD+E + Q YRE+ Sbjct: 301 PEDSQKFHEEMLANIEEIWKELKIPYRVVSCSTGDMGIRDIKQYDIEAYRYSQEKYREVG 360 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S ++ SRR+N +Y D + +TL+G+G+ + R +IAI++ Y DG++ +P Sbjct: 361 SFDNTTDWISRRLNIKYIDKKGNK-DYVYTLDGTGLPMQRTMIAIMDTYQQKDGTILVPE 419 Query: 412 VLRPYMNNLAV 422 VLR Y N + Sbjct: 420 VLRKYTNFSEI 430 >gi|14424755|gb|AAH09390.1| Seryl-tRNA synthetase [Homo sapiens] Length = 514 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 119/470 (25%), Positives = 209/470 (44%), Gaps = 50/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 420 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A + AILENY G +T+P L+ +M +I Sbjct: 421 EFVHMLNATMCATTCTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 469 >gi|73959369|ref|XP_852762.1| PREDICTED: similar to seryl-tRNA synthetase isoform 2 [Canis familiaris] Length = 536 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 116/492 (23%), Positives = 209/492 (42%), Gaps = 72/492 (14%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVRADGEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKN----------------ETSTLK-------EQLPILEKEEHE 93 IG+ + + +++ + S +K E + + E + Sbjct: 63 TIGEKMKKKEPVGDESIPEDALNLDDLTADTLANLKVSQIKKVRLLIDEAILKCDAERIK 122 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 + + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 LEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFEG 181 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 EKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQLS 240 Query: 214 KFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ F Sbjct: 241 QFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCF 300 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRV 319 R E GS GRDTRG+ R HQF K E + S+ E M++ AE+ + L + Y + Sbjct: 301 RQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHI 360 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS------ 373 V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 VNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKIK 420 Query: 374 -------------------KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 K ++F H LN + A R + AILENY G + +P L+ Sbjct: 421 NNPHLSTEDKLKALSSLSPKKVEFVHMLNATMCATTRTICAILENYQTEKG-IVVPEKLK 479 Query: 415 PYM--NNLAVIK 424 +M +I Sbjct: 480 EFMPPGLQELIP 491 >gi|322489210|emb|CBZ24465.1| putative seryl-tRNA synthetase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 474 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 125/464 (26%), Positives = 215/464 (46%), Gaps = 44/464 (9%) Query: 2 LDIQWIR--QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS--- 55 LDIQ R + + + + ++R+ +P+ + I+ +D++ R E + N+ S Sbjct: 3 LDIQLFRDPEMADIVRESERRRYAKPEIVDDIIEIDKRWRRTQFLTEASKKMINTCSKAV 62 Query: 56 -----------------AQIGQAIAEG--NLSLVD-----ALKNETSTLKEQLPILEKEE 91 A + A EG + ++ LK + L Q+ L K Sbjct: 63 GAKKKAKEADGDVSEVPADVMSAAQEGTLDTEKLESLCVLQLKELSKALATQVESLAKLA 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 E + +++ + N+ E VP+ ++ + H + E LGLM Sbjct: 123 AEQEAERDRMVISVGNILHESVPLSNDEETGNVVVR-TFGDVTRRMKMTHVDCMERLGLM 181 Query: 152 DF-DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D T ++G R VL G L L+ AL + ++ GY P + E+M Sbjct: 182 DTSKTVTAMAGGRAFVLRGGLVQLQFALISYALNF-LIARGYEPFYPPFFLNKESMGAVA 240 Query: 211 QIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 Q+ F + ++ + D ++LI TSE + ++++ P+++ ++ FR EAG+ Sbjct: 241 QLSDFDESLYKVSGDGDEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAGA 300 Query: 268 AGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GRDT G+ R HQF K E + + S+ E M+ +++ + L L YRV+++C+G Sbjct: 301 HGRDTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICSG 360 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN-----SKSLKFTH 380 L +A K YDLE W G +RE+ SCS C ++Q+R +N R+ + + ++ H Sbjct: 361 ALNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARGVNCRFGPNTKGSTANNTKEYCH 420 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 LNG+ AV R + I ENY +G + IP VLRP+M V+K Sbjct: 421 MLNGTLCAVTRTMCCICENYQTEEG-IVIPEVLRPFMMGTEVLK 463 >gi|157865542|ref|XP_001681478.1| seryl-tRNA synthetase [Leishmania major strain Friedlin] gi|68124775|emb|CAJ02371.1| putative seryl-tRNA synthetase [Leishmania major strain Friedlin] Length = 474 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 125/464 (26%), Positives = 212/464 (45%), Gaps = 44/464 (9%) Query: 2 LDIQWIR--QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS--- 55 LDIQ R + + + + ++R+ P+ + I+ +D++ R E + N+ S Sbjct: 3 LDIQLFRDPEMADIVRESERRRYARPEIVDDIIEIDKRWRRTQFLTEASKKMINTCSKAV 62 Query: 56 -----------------AQIGQAIAEG--NLSLVD-----ALKNETSTLKEQLPILEKEE 91 A + A EG + ++ LK + L Q+ L K Sbjct: 63 GAKKKAKEADGDVSEVPADVMSAAQEGTLDTEKLEPLCILQLKELSKALSTQVESLAKLA 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 E + +++ + NV E VP+ ++ + H + E LGLM Sbjct: 123 AEQEAERDRMVISVGNVLHESVPVSNDEETGNVVVR-TFGDVTRRMRMTHVDCMERLGLM 181 Query: 152 DF-DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D T ++G R VL G L L+ AL + ++ GY P + E M Sbjct: 182 DTSKTVTAMAGGRAFVLRGGLVQLQFALISYALNF-LIARGYEPFYPPFFLNKEYMGAVA 240 Query: 211 QIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 Q+ F + ++ + D ++LI TSE + ++++ P+++ ++ FR EAG+ Sbjct: 241 QLSDFDESLYKVSGDGDEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAGA 300 Query: 268 AGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GRDT G+ R HQF K E + + S+ E M+ +++ + L L YRV+++C+G Sbjct: 301 HGRDTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICSG 360 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK-----SLKFTH 380 L +A K YDLE W G +RE+ SCS C ++Q+R +N R+ + ++ H Sbjct: 361 ALNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTASNTKEYCH 420 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 LNG+ AV R + I ENY +G + IP VLRP+M ++K Sbjct: 421 MLNGTLCAVTRTMCCICENYQTEEG-IVIPEVLRPFMMGTEMLK 463 >gi|326431366|gb|EGD76936.1| seryl-tRNA synthetase [Salpingoeca sp. ATCC 50818] Length = 530 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 128/487 (26%), Positives = 213/487 (43%), Gaps = 65/487 (13%) Query: 2 LDIQWIRQN-------PEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNS 53 LDI R+ P+ + +KR + + + I+++DE+ R + + A +N Sbjct: 3 LDITSFREQEDPDVLGPDGVREIQRKRFKDVKVVDTIIAIDEQWRQCTFVTDKLNAAKNV 62 Query: 54 NSAQIGQAIAEG------------------------------NLSLVDALKNETSTLKEQ 83 S I + +L + + L Sbjct: 63 CSNTIRDKMKAKEGQGDTDEIPQSIHDLIKQLTTNKASLDDVKAALAELCVKQVKNLSSH 122 Query: 84 L----PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK-PSAIHLS 138 + +K + + ++L+ + N E VP+ + N ++R+VGK Sbjct: 123 IDVLKADNKKAMEKHDADRQELLRSVGNELHESVPVHSDEEHNAIVRTVGKAAREHSRKK 182 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 H ++ + +D +R +G R L G LE AL + + +T +S P Sbjct: 183 YSHVDLIVMIDGVDSERGVNAAGGRCYYLRGPGVCLEMALVSYALQF-LMARKFTALSPP 241 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIE 246 L +R +AM Q+ +F ++++ T + ++LI T+E + + E I Sbjct: 242 LFMRKDAMQKVAQLSQFDEELYKVTGKASEIQGDTAVEEKYLIATAEQPIAAYHQEETIV 301 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLS 304 K +PLR+ ++ FR E GS GRDT G+ R HQF K E IT D S+ + ML+ Sbjct: 302 PKDVPLRYVGVSECFRQEVGSHGRDTTGIFRVHQFKKIEQFVITSPHDGESWKMMDEMLT 361 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRM 364 AE+ LK L L Y+VV++ +G L +A K D+E W G +RE+ SCS C ++Q+RR+ Sbjct: 362 NAEDFLKSLGLPYQVVNIVSGALNLAAAKKLDIEAWFPGSGAFRELVSCSNCTDYQARRL 421 Query: 365 NSRYRDPN-SKSLKFTHTLNGSGVAVGRCLIAILENYLNAD----GSVTIPTVLRPYMNN 419 N RY + + H LN + A R + ILEN+ D G + +P VLRP+M + Sbjct: 422 NIRYGQKKMNARTEHVHMLNSTLCATTRTICCILENFQVGDLESNGGIVVPEVLRPFMPD 481 Query: 420 --LAVIK 424 I Sbjct: 482 QYKEFIP 488 >gi|195034327|ref|XP_001988872.1| GH10337 [Drosophila grimshawi] gi|193904872|gb|EDW03739.1| GH10337 [Drosophila grimshawi] Length = 504 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 117/463 (25%), Positives = 197/463 (42%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + KKR + E +++ D + R + +++ +N S Sbjct: 3 LDLDLFRGDKGGNPDAVRDNQKKRFKDVGLVETVIAKDGEWRQRRHRADNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNLSLVDA--------------------------LKNETSTLKEQLPILEKE 90 IG + + + +K + E + +K Sbjct: 63 VIGDKMKKKEPVGAEEELPAAIRDEDLTLLTAELLQPLTVNQIKKLRVLIDEAMTDNQKS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + N E VP+ +EN + R+ G S + + Sbjct: 123 LELAEQTRNTALREVGNHLHESVPVSNDEDENRVERTFGDCAKRGKYSHVDLIV--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ ++ +SG R LTG LE+AL Q + Y + P +R + M Sbjct: 181 MNAEKGAVVSGGRGYFLTGAAVFLEQALIQHAL-HSLYAKDYLPLYTPFFMRKDVMQEVA 239 Query: 211 QIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ D ++LI TSE + + E + SLP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKGSERAEEAGIDEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE+ + L + Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWQMMDEMIDNAEQFCQSLGIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YR+V++ +G L +A K DLE W G YRE+ SCS C ++Q+RR+ RY + Sbjct: 360 YRIVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRYGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE + G + +P L+ YM Sbjct: 420 AVDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKRYM 461 >gi|8923421|ref|NP_060297.1| seryl-tRNA synthetase, mitochondrial isoform b precursor [Homo sapiens] gi|23822219|sp|Q9NP81|SYSM_HUMAN RecName: Full=Seryl-tRNA synthetase, mitochondrial; AltName: Full=SerRSmt; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; Flags: Precursor gi|7020557|dbj|BAA91176.1| unnamed protein product [Homo sapiens] gi|9188535|dbj|BAA99557.1| mitochondrial seryl-tRNA synthetase [Homo sapiens] gi|27781316|gb|AAH42912.1| Seryl-tRNA synthetase 2, mitochondrial [Homo sapiens] gi|261859068|dbj|BAI46056.1| F-box protein 17 [synthetic construct] Length = 518 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 125/443 (28%), Positives = 203/443 (45%), Gaps = 20/443 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDIERFCACPEEAAHALELRKGELRSADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +A + V L+ ++++L L E ++ +PN + Sbjct: 118 RALLANQDSGEVQQDPKYQGLRARGREIRKELVHLYPREAQLEEQFYLQALKLPNQTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L VG KP R H EIGE L ++ R + +SG R L G A Sbjct: 178 VPVGDESQARVLHM-VGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F + G+T ++ P L+R G G P Sbjct: 237 LLQHGLVNFTFNKLL-RRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ RG+ R H F K E+ Sbjct: 296 LAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCYRAETNT-GQEPRGLYRVHHFTKVEMF 354 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 355 GVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 414 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +FQSRR++ ++ + L+F HT+N + AV R LIA+LE+ DG Sbjct: 415 RFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATACAVPRLLIALLESNQQKDG 473 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P L+ Y+ + H+ Sbjct: 474 SVLVPPALQSYLGTDRITAPTHV 496 >gi|33468931|ref|NP_035449.1| seryl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus] gi|26349967|dbj|BAC38623.1| unnamed protein product [Mus musculus] gi|123220016|emb|CAM22590.1| seryl-aminoacyl-tRNA synthetase [Mus musculus] gi|148670022|gb|EDL01969.1| seryl-aminoacyl-tRNA synthetase, isoform CRA_b [Mus musculus] Length = 536 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 120/494 (24%), Positives = 210/494 (42%), Gaps = 74/494 (14%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL + S +K E + + E Sbjct: 63 TIGEKMKKKEAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKCDGERV 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGPLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ + M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS----- 373 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKK 420 Query: 374 ---------------------KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 K ++F H LN + A R + AILENY G + +P Sbjct: 421 KNNLRFSTQNKLKAMSSLFSPKKVEFVHMLNATMCATTRTICAILENYQAEKG-IAVPEK 479 Query: 413 LRPYM--NNLAVIK 424 LR +M +I Sbjct: 480 LREFMPPGLQELIP 493 >gi|74212487|dbj|BAE30986.1| unnamed protein product [Mus musculus] Length = 511 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 118/470 (25%), Positives = 207/470 (44%), Gaps = 51/470 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL + S +K E + + E Sbjct: 63 TIGEKMKKKEAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKCDGERV 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H + + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVNLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGPLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 F E GS GRDTRG+ R HQF K E + S+ + M++ AEE + L + Y Sbjct: 301 F-QEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYH 359 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SL 376 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 360 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV 419 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 +F H LN + A R + AILENY G + +P LR +M +I Sbjct: 420 EFVHMLNATMCATTRTICAILENYQAEKG-IAVPEKLREFMPPGLQELIP 468 >gi|312221094|emb|CBY01035.1| similar to seryl-trna synthetase [Leptosphaeria maculans] Length = 476 Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats. Identities = 122/429 (28%), Positives = 208/429 (48%), Gaps = 22/429 (5%) Query: 6 WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +I++ +PE + + +KR+ + + I++ E +R I + N+ QIGQ Sbjct: 24 FIKERGGDPEKIRDSQRKRNAPVELVDEIIADFEDHRKTQYAATQIGSSINAIQKQIGQK 83 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 D L E L+++ ++E E L I N ++VP+ T+ ++ Sbjct: 84 KKA--KENADDLLAEKVELEKKKKAQQEEADEKLKKLNIKAKSIGNYVYKDVPVSTTEDD 141 Query: 122 NILIRSVGKKPSAIHLSREHFEIG---EALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N ++++ ++ L D +R K+ G R L + L AL Sbjct: 142 NAVVKTWAPADRKAEFKKDGIPHHGVLTRLDGYDPERGVKIVGHRGYCLKNYGLFLNLAL 201 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-------GRWLIPT 231 + ++ GYT P ++ + M T Q+ F D+++ T+ ++LI T Sbjct: 202 INYGLEF-LFNKGYTPNQPPFMMLRDQMAKTAQLSDFDDELYKVTESKDKPETDKYLIAT 260 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 SE L+ L+S E ++++ LP+++ + +FR EAGS G+D G+ R HQF K E +T Sbjct: 261 SEQPLSGLHSEEWLQAEDLPIKYAGYSTNFRKEAGSHGKDAWGIFRIHQFEKVEQFLLTH 320 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA--GQNLYRE 349 E S+ + ML+ +EE + L L Y+VV++ +G L +A DLE W G Y+E Sbjct: 321 PEKSWEAFDEMLATSEEFYQSLGLPYQVVAIVSGALNNAAAMKRDLEAWFPVTGGGEYKE 380 Query: 350 ISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 + S S C ++Q+R + R+ + N+ ++ H LNG+ A R L ILENY DG Sbjct: 381 LVSISNCTDYQTRELEIRHGAKKLNATRKEYVHALNGTLCATERTLCCILENYQTPDG-F 439 Query: 408 TIPTVLRPY 416 T+P+VLR Y Sbjct: 440 TVPSVLRKY 448 >gi|307213057|gb|EFN88588.1| Seryl-tRNA synthetase, cytoplasmic [Harpegnathos saltator] Length = 493 Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats. Identities = 126/462 (27%), Positives = 207/462 (44%), Gaps = 50/462 (10%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R++ PE + K+R + Q + ++ D+ R L ++ +N S Sbjct: 3 LDLDLFRKDKGFDPEKIRDNQKRRFKDVQLVDTVIEKDKHWRQLRHCADNFNKLKNLCSK 62 Query: 57 QIGQAIAEGNL---------SLVDALKNETST----------------LKEQLPILEKEE 91 +IG+ + + ++ D L N TS + E + ++ Sbjct: 63 EIGEKMKKKEPLGDDDTVPQAIADDLDNLTSESLKALTVVQIKRIRTLIDEAIQKNDESL 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 S + + N E VP+ + EN + R+ G S + M Sbjct: 123 KTTESERNSALREVGNHLHESVPVTDNEEENKVERTWGDCSVKKKYSHVDLIH--MIDGM 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T +SG R LTG L++ + E GY + P ++R +AM Q Sbjct: 181 DGERGTGVSGGRGYFLTGPAVFLQQ-GLNQLALRKLFEKGYKPLYTPFIMRKDAMQEVAQ 239 Query: 212 IPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F ++++ + ++LI TSE + + E I +LP+R+ ++ Sbjct: 240 LSQFDEELYKVIGKGSERNEDKELEEKYLIATSEQPIAAFHRGEWIAESALPIRYAGIST 299 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E +T S+ E M+S AEE + L++ Y Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMISNAEEFYQALNIPY 359 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKS 375 R+V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + + Sbjct: 360 RIVNIVSGALNHAASKKLDLEAWFPGSRAFRELVSCSNCLDYQARRLLVRYGKTKKMNTT 419 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + H LN + AV R + AILE + G V +P +L YM Sbjct: 420 TDYVHMLNATMCAVTRVICAILEVHQTETG-VKVPEILMDYM 460 >gi|55959084|emb|CAI13600.1| seryl-tRNA synthetase [Homo sapiens] Length = 536 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 121/492 (24%), Positives = 211/492 (42%), Gaps = 72/492 (14%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS----- 373 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKR 420 Query: 374 -------------------KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 K ++F H LN + A R + AILENY G +T+P L+ Sbjct: 421 KNNLHLSTQNKLEASLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLK 479 Query: 415 PYM--NNLAVIK 424 +M +I Sbjct: 480 EFMPPGLQELIP 491 >gi|308235041|ref|ZP_07665778.1| seryl-tRNA synthetase [Gardnerella vaginalis ATCC 14018] Length = 370 Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats. Identities = 117/365 (32%), Positives = 200/365 (54%), Gaps = 7/365 (1%) Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 S L +T L +++ + E + + + + N+ +E P G + ++ Sbjct: 5 QDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAPEGGEDDYVVVK 64 Query: 126 R--SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 + + + ++H +G + +D R K++G+RF L G +A L+ A+ + Sbjct: 65 KVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTMAV 124 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNLYS 241 D EHG+T P LVR E M GTG + AD+++ D ++L+ TSEV+L ++ Sbjct: 125 D-QAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVALAGMHE 183 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 EI++ + LR+ + +R EAG+AG+DT G++R HQF K E+ ++EDS EH++ Sbjct: 184 DEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEHQK 243 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 +L +E+L ++++ YR++ GDLG SA + +D E W+ Q YRE++S S C +Q+ Sbjct: 244 LLGMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSNCTEYQA 303 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLA 421 RR+N R R + + TLNG+ +A R L+AILEN+ + DGS+ IP ++ YM Sbjct: 304 RRLNVRERMEDGG-TRPVSTLNGT-LATTRWLVAILENHQHEDGSIDIPKAMQAYMGGKE 361 Query: 422 VIKKE 426 VI+ Sbjct: 362 VIEPT 366 >gi|154335764|ref|XP_001564118.1| seryl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061152|emb|CAM38174.1| putative seryl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 474 Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats. Identities = 128/464 (27%), Positives = 216/464 (46%), Gaps = 44/464 (9%) Query: 2 LDIQWIR--QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS--- 55 LDIQ R + + + + ++R+ +P+ + I+ +D+ R E + N+ S Sbjct: 3 LDIQLFRDPEMADVVRESERRRYAKPEIVDKIIEVDKHWRRTQFLTEASKKMINTCSKAV 62 Query: 56 -----------------------AQIGQAIAEGNLSL-VDALKNETSTLKEQLPILEKEE 91 AQ G A+ SL + LK + L Q+ L K Sbjct: 63 GAKKKAKEADGDSSEVPADVMSAAQEGTLDAQKLESLCILQLKELSKALTTQVEGLAKLA 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 E + +++ + NV E VP+ N ++ + H + E LGLM Sbjct: 123 AEQEAERDRMVISVGNVLHESVPVSNDENTGNVVVR-TFGDVTRRMKMTHVDCMERLGLM 181 Query: 152 DF-DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D T ++G R VL G L L+ AL + ++ GY P + E M Sbjct: 182 DTSKTVTAMAGGRAFVLRGGLVQLQFALISYALNF-LIARGYEPFYPPFFLNKEYMGAVA 240 Query: 211 QIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 Q+ +F + ++ + D ++LI TSE + ++++ + P+++ ++ FR EAG+ Sbjct: 241 QLSEFDESLYKVSGDGDEKYLIATSEAPIAAYHTNKWFTEMNEPIKYAGVSSCFRKEAGA 300 Query: 268 AGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GRDT G+ R HQF K E + + S+ E M+ +++ + L L YRV+++C+G Sbjct: 301 HGRDTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMMQTSQDFNESLGLPYRVINICSG 360 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN-----SKSLKFTH 380 L +A K YDLE W G +RE+ SCS C ++Q+R +N R+ + + ++ H Sbjct: 361 ALNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTANNTKEYCH 420 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 LNG+ AV R + I ENY +G + IP VLRP+M ++K Sbjct: 421 MLNGTLCAVTRTMCCICENYQTEEG-IVIPEVLRPFMMGTEMLK 463 >gi|322497200|emb|CBZ32273.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 474 Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 128/465 (27%), Positives = 219/465 (47%), Gaps = 46/465 (9%) Query: 2 LDIQWIR--QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS--- 55 LDIQ R + + + + ++R+ P+ + I+ +D++ R E + N+ S Sbjct: 3 LDIQLFRDPEMADIVRESERRRYARPEIVDDIIEIDKRWRRTQFLTEASKKMINTCSKAV 62 Query: 56 -----------------AQIGQAIAEG--NLSLVD-----ALKNETSTLKEQLPILEKEE 91 A + A EG + ++ LK + L Q+ L K Sbjct: 63 GAKKKAKEADGDVSEVPADVMSAAREGTLDTEKLESLCILQLKQLSKALATQVESLAKLA 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANE-NILIRSVGKKPSAIHLSREHFEIGEALGL 150 E + +++ + NV E VP+ N+++R+ G + ++ H + E LGL Sbjct: 123 AEQEAERDRMVISVGNVLHESVPVSNDEETGNVVVRTFGDVTRRLKMT--HVDCMERLGL 180 Query: 151 MDF-DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 MD T ++G R VL G L L+ AL + ++ GY P + E M Sbjct: 181 MDTSKAVTAMAGGRAFVLRGGLVQLQFALISYALNF-LIARGYEPFYPPFFLNKEYMGAV 239 Query: 210 GQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 Q+ F + ++ + D ++LI TSE + ++++ P+++ ++ FR EAG Sbjct: 240 AQLSDFDESLYKVSGDGDEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAG 299 Query: 267 SAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 + GRDT G+ R HQF K E + + S+ E M+ +++ + L L YRV+++C+ Sbjct: 300 AHGRDTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICS 359 Query: 325 GDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK-----SLKFT 379 G L +A K YDLE W G +RE+ SCS C ++Q+R +N R+ + ++ Sbjct: 360 GALNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTANSTKEYC 419 Query: 380 HTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 H LNG+ AV R + I ENY +G + IP VLRP+M ++K Sbjct: 420 HMLNGTLCAVTRTMCCICENYQTEEG-IVIPEVLRPFMMGTEMLK 463 >gi|253741836|gb|EES98697.1| Seryl-tRNA synthetase [Giardia intestinalis ATCC 50581] Length = 457 Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats. Identities = 119/453 (26%), Positives = 205/453 (45%), Gaps = 42/453 (9%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NPE + + ++R+ + + ++ LD+ + + N + Sbjct: 3 LDINLFRVSKGGNPEKIKESQRRRYASIEAVDKVIELDKAWVAKDYEAGQLSRELNQLNK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 G A+ + + D L + +T K++ + KE ++ + +++ I N+ + V I Sbjct: 63 DFGAAMKAKSPT--DELSKKIATNKQETERVRKEVAQLLAERNAVLNTIGNIVCDAVVID 120 Query: 117 TSANENILIRSV------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + N ++ + P+ + + H + +MD R K+SG R LTG+ Sbjct: 121 DNEDNNKVVYTNDAVIKANPSPNGVEKALNHVTLMTNCRMMDCPRGVKISGNRGYFLTGY 180 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRW 227 A L +AL Q+ + T GY + P + EAM Q+ F + ++ + + ++ Sbjct: 181 GALLNQALIQYALKFLT-GRGYQAMQTPFFMEQEAMSCCCQLEDFDEQLYKVSGEGNDKY 239 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPL----------------------RFTTLAPSFRSEA 265 LI TSE L + E+I R+ ++ FR E Sbjct: 240 LIATSEQPLCAYHMGEVINFSKQGQATELTYNSIKTGKQEKKTVECIRYAGMSTCFRKEV 299 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 G G DT G+ R HQF K E + + +EEDS+ E M+ L + YRVV + +G Sbjct: 300 GRHGHDTLGIFRIHQFEKIEQIVVCKEEDSWDMMEYMIDNCRAFFDSLMIPYRVVIIVSG 359 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS 385 L +A YDLE + G + YRE+ SCS C ++QSR ++ +Y+D K K+ H LN + Sbjct: 360 ALNNAAAMKYDLEAYFPGSDTYRELVSCSNCTDYQSRSLDIKYQD--GKDKKYVHLLNST 417 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 A R L ++ENY G + +P L+ Y+ Sbjct: 418 LSATERTLCCLVENYQTPTG-IKVPAPLQDYVG 449 >gi|291398353|ref|XP_002715854.1| PREDICTED: seryl-tRNA synthetase isoform 1 [Oryctolagus cuniculus] Length = 538 Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats. Identities = 119/494 (24%), Positives = 207/494 (41%), Gaps = 74/494 (14%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKNE-----------------TSTLK-------EQLPILEKEEH 92 IG+ + + D E S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESIPENVLNFDDVTADTLTNLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFESLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LRNRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS----- 373 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKR 420 Query: 374 ---------------------KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 K ++F H LN + A R + AILENY G + +P Sbjct: 421 KNNLPLSAQNKLEATSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKG-IIVPEK 479 Query: 413 LRPYM--NNLAVIK 424 L+ +M +I Sbjct: 480 LKEFMPPGLQELIP 493 >gi|164656381|ref|XP_001729318.1| hypothetical protein MGL_3353 [Malassezia globosa CBS 7966] gi|159103209|gb|EDP42104.1| hypothetical protein MGL_3353 [Malassezia globosa CBS 7966] Length = 440 Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats. Identities = 121/441 (27%), Positives = 217/441 (49%), Gaps = 33/441 (7%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 M+D+Q ++ NP+ + + +KR+ + + +LS+ + N+ Sbjct: 1 MIDLQLLQVEKGGNPDLVRESQRKRNAPVELVDEVLSMYKHW------------EVNAT- 47 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q + DA + L ++ + + E +++ I N+ ++VP+ Sbjct: 48 -QKAITAKKKAKEDADAELAKKKELDAKIIEFKPQVAEAERAMRAKAVTIGNIVGDKVPV 106 Query: 116 GTSANENILIRSVGKK-PSAIHLSREHFEIGEALGL----MDFDRATKLSGARFSVLTGH 170 + ++N+ +R+ + P+A R F + D +R K+SG R LTG Sbjct: 107 SNTEDDNLTVRTWHPEGPNAQFEKRIDFVSHHEVMYRLELFDTERGAKISGHRGFFLTGD 166 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRW 227 L +AL + +D + Y ++ P ++R E M T Q+ +F ++++ T D ++ Sbjct: 167 GVDLNQALINYGLDF-LRKKNYKKMMTPFMMRREHMAKTAQLEQFDEELYKVTGDEDDKY 225 Query: 228 LIPTSEVSLTNLYSHEIIE--SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 LI TSE ++ +S+E + ++ LP+++ + FR EAGS G+DT G+ R HQF K E Sbjct: 226 LIATSEQPISAFHSNEWFDRPAEQLPIKYAGYSTCFRKEAGSHGKDTWGIFRVHQFEKIE 285 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 IT S+ + ML+ +EE + L + YRVV++ +G L +A YDLE W Q Sbjct: 286 QFCITDPASSWEMLDHMLANSEEFYQSLQIPYRVVAIVSGALNNAAAMKYDLEAWFPFQG 345 Query: 346 LYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 ++E+ SCS C ++QSRR+ R + ++ H LNG+ A R L ++EN+ + Sbjct: 346 EHKELVSCSNCTDYQSRRLEVRCGMKKQGDTKKQYCHMLNGTLCATERALCCLVENWQTS 405 Query: 404 DGSVTIPTVLRPYMNNLAVIK 424 +G + IP VL+PYM + Sbjct: 406 EG-LRIPPVLQPYMQGRDFLP 425 >gi|312385249|gb|EFR29798.1| hypothetical protein AND_01002 [Anopheles darlingi] Length = 503 Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats. Identities = 123/461 (26%), Positives = 202/461 (43%), Gaps = 49/461 (10%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + P + +R + E ++ D+K R +++ +N S Sbjct: 3 LDLDLFRSDKGHDPAKIRENQTRRFKDVALVETVIEQDKKWRACRFNMDNYNKLKNLCSK 62 Query: 57 QIGQAIAEGNL--SLVDALKNETST------------------------LKEQLPILEKE 90 +IG+ + + + L E + E + E+ Sbjct: 63 EIGEKMKKKEPQGDEAEPLPEEVEKELRDLQLTSLKSLTVQQIKKVRSRIDEAVLQNEQL 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 E ++ + + N E VP+ +EN + R+ G H ++ + Sbjct: 123 MREAEANRNTALREVGNHLHESVPVSNDEDENRVERTFGNCEQR--QRYSHVDLIVMIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ D+ +SG R LTG LE+AL Q + YT + P +R E M Sbjct: 181 MNGDKGAVVSGGRGYFLTGPAVFLEQALIQHAL-HSLYTKDYTPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT----------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 Q+ +F ++++ TD ++LI TSE + + E I +LP+++ L+ Sbjct: 240 QLSQFDEELYKVVGKSSGEEGATDEKYLIATSEQPIAAYHRDEWIAESTLPIKYAGLSTC 299 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE + L + YR Sbjct: 300 FRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEAFCQSLGIPYR 359 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS--L 376 VV++ +G L +A K DLE W AG +RE+ SCS C ++Q+RR+ RY + + Sbjct: 360 VVNIVSGALNHAAAKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNAAV 419 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + H LN + A R + AILE + G + +P VL+ YM Sbjct: 420 DYVHMLNATMCATTRVICAILETHQTETG-IKVPEVLQKYM 459 >gi|58389688|ref|XP_317207.2| AGAP008265-PA [Anopheles gambiae str. PEST] gi|55237426|gb|EAA12316.2| AGAP008265-PA [Anopheles gambiae str. PEST] Length = 503 Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats. Identities = 126/464 (27%), Positives = 206/464 (44%), Gaps = 52/464 (11%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + PE + KR + E ++ D++ R +++ +N S Sbjct: 3 LDLDLFRSDKGHDPEKIRENQTKRFKDVALVETVIEQDKEWRRCRFNMDNYNKLKNLCSK 62 Query: 57 QIGQAIAEGNLS--------------------------LVDALKNETSTLKEQLPILEKE 90 +IG+ + + V+ +K + + + E++ Sbjct: 63 EIGEKMKKKEPQGDESEPLPQSVQDQLREMQLTSLKELTVNQIKKVRTLIDAAVVENEQQ 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 EV + + + N E VP+ +EN + R+ G + + S + + Sbjct: 123 MKEVEAKRNAALREVGNHLHESVPVSNDEDENRVERTFGNCETRLKYSHVDLIV--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 M+ D+ +SG R LTG LE+AL Q + YT + P +R E M Sbjct: 181 MNGDKGAVVSGGRGYFLTGPAVFLEQALIQHAL-HSLYAKDYTPLYTPFFMRKEVMQEVA 239 Query: 211 QIPKFADDMFCT-------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTL 257 Q+ +F ++++ TD ++LI TSE + + E I SLP+++ L Sbjct: 240 QLSQFDEELYKVVGKGSERAEDGTATDEKYLIATSEQPIAAYHRDEWIPEASLPIKYAGL 299 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDL 315 + FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE + L + Sbjct: 300 STCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEAFCQSLGI 359 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS 375 YRVV++ +G L +A K DLE W AG +RE+ SCS C ++Q+RR+ RY + Sbjct: 360 PYRVVNIVSGALNHAASKKLDLEAWFAGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMN 419 Query: 376 --LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE + G V +P VL+ YM Sbjct: 420 AAVDYVHMLNATMCATTRVICAILETHQTETG-VKVPEVLQKYM 462 >gi|255936631|ref|XP_002559342.1| Pc13g09170 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583962|emb|CAP91986.1| Pc13g09170 [Penicillium chrysogenum Wisconsin 54-1255] Length = 528 Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats. Identities = 126/484 (26%), Positives = 202/484 (41%), Gaps = 62/484 (12%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 D++ IRQN + R+ + I L E+ R L ++ R+R I Sbjct: 45 DVKHIRQNADLYAQNCVDRNYAGHAGYPSKIQQLSEEARQLDHDLKTPRSRIKQLEKTIA 104 Query: 60 QA--------------IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 + + LK E LK++ + + + + +L + Sbjct: 105 KLHFATRQDTDGNTNDKGPSPSEELAELKLEAQRLKDESQSMTERKATCTEEINRLALSL 164 Query: 106 PNVPLEEVPIGTSA-------NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 PN+ PIG + ++ +R H IG L L+DF + Sbjct: 165 PNLSSPFTPIGHDPALVQYINFNPEEPPTWTRQSQTELQARSHVTIGTELNLLDFASSAT 224 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 +G + L A LE+AL Q+ + + G+ V+ P +V G P+ + Sbjct: 225 TTGWGWYFLINEGAMLEQALIQYSLSI-ARRRGWKTVAPPSIVYSYIAEACGFQPRDQHN 283 Query: 219 MFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 R L T+E+ L +Y+ I + SLP++ + +R+EAG Sbjct: 284 EQQIWSIEQNDRDKNTKPQRSLTGTAEIPLAAMYAGRDINASSLPIKLVGASRCYRAEAG 343 Query: 267 SAGRDTRGMLRQHQFWKCELVSITRE-----EDSFTEHERMLSCAEEILKRLDLHYRVVS 321 S G DT+G+ R H+F K EL T S +L EIL L L RV+ Sbjct: 344 SRGVDTKGLYRVHEFTKVELFGWTDSVEGVGPTSDDLFAELLDMQMEILTALHLPCRVLE 403 Query: 322 LCTGDLGFSACKTYDLEVWLAGQ-------------------NLYREISSCSTCGNFQSR 362 + +GDLG SA + D+E + + + E++S S C ++QSR Sbjct: 404 MPSGDLGASATRKRDIEALFPSRLRAPSGTAAPVDPEIHHLESAWGEVTSASICTDYQSR 463 Query: 363 RMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLA 421 R+ +R R +K +F HT+NG+ +AV R L AILEN +A+ G V IP VLRP+M+ + Sbjct: 464 RLAARVRGGGAKDSRFPHTVNGTAMAVPRVLAAILENGWDAERGVVVIPEVLRPWMDGMD 523 Query: 422 VIKK 425 I + Sbjct: 524 SIGR 527 >gi|146079628|ref|XP_001463813.1| seryl-tRNA synthetase [Leishmania infantum JPCM5] gi|134067901|emb|CAM66182.1| putative seryl-tRNA synthetase [Leishmania infantum JPCM5] Length = 474 Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats. Identities = 128/465 (27%), Positives = 219/465 (47%), Gaps = 46/465 (9%) Query: 2 LDIQWIR--QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS--- 55 LDIQ R + + + + ++R+ P+ + I+ +D++ R E + N+ S Sbjct: 3 LDIQLFRDPEMADIVRESERRRYARPEIVDDIIEIDKRWRRTQFLTEASKKMINTCSKAV 62 Query: 56 -----------------AQIGQAIAEG--NLSLVD-----ALKNETSTLKEQLPILEKEE 91 A + A EG + ++ LK + L Q+ L K Sbjct: 63 GAKKKAKEADGDVSEVPADVMSAAREGTLDTEKLESLCILQLKQLSKALATQVESLAKLA 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANE-NILIRSVGKKPSAIHLSREHFEIGEALGL 150 E + +++ + NV E VP+ N+++R+ G + ++ H + E LGL Sbjct: 123 AEQEAERDRMVISVGNVLHESVPVSNDEETGNVVVRTFGDVTRRLKMT--HVDCMERLGL 180 Query: 151 MDF-DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 MD T ++G R VL G L L+ AL + ++ GY P + E M Sbjct: 181 MDTSKAVTAMAGGRAFVLRGGLVQLQFALISYALNF-LIARGYEPFYPPFFLNKEYMGAV 239 Query: 210 GQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 Q+ F + ++ + D ++LI TSE + ++++ P+++ ++ FR EAG Sbjct: 240 AQLSDFDESLYKVSGDGDEKYLIATSEAPIAAYHTNKWFTEMKEPIKYAGVSSCFRKEAG 299 Query: 267 SAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 + GRDT G+ R HQF K E + + S+ E M+ +++ + L L YRV+++C+ Sbjct: 300 AHGRDTLGIFRVHQFDKLEQFVVCSPREDQSWKMLEEMIQTSQDFNESLGLPYRVINICS 359 Query: 325 GDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK-----SLKFT 379 G L +A K YDLE W G +RE+ SCS C ++Q+R +N R+ + ++ Sbjct: 360 GALNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQARSVNCRFGPNTKGSTANSTKEYC 419 Query: 380 HTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 H LNG+ AV R + I ENY +G + IP VLRP+M ++K Sbjct: 420 HMLNGTLCAVTRTMCCICENYQTEEG-ILIPEVLRPFMMGTEMLK 463 >gi|154487567|ref|ZP_02028974.1| hypothetical protein BIFADO_01423 [Bifidobacterium adolescentis L2-32] gi|154083784|gb|EDN82829.1| hypothetical protein BIFADO_01423 [Bifidobacterium adolescentis L2-32] Length = 235 Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats. Identities = 135/234 (57%), Positives = 171/234 (73%), Gaps = 7/234 (2%) Query: 197 APLLVRDEAMYGTGQIPKFADDMFCTT-------DGRWLIPTSEVSLTNLYSHEIIESKS 249 PL V ++M GTGQ+PKF DD+F T R+LIPTSEV LTN+ EI+E+ + Sbjct: 1 MPLTVNADSMRGTGQLPKFEDDLFATVVGEGEAASKRYLIPTSEVPLTNVVRDEIVEADA 60 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LPLR T + FR+EAGSAGRDTRGM+RQHQF K ELV+I R E+S+ EHERM CAE + Sbjct: 61 LPLRMTAHSMCFRAEAGSAGRDTRGMIRQHQFEKVELVTIARPEESYAEHERMTRCAEVV 120 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR 369 L+ L L YR + LC+GD+GF+A KTYDLEVWL +N YREISSCS C FQ+RRM +R+R Sbjct: 121 LEALGLPYRRMLLCSGDMGFAAAKTYDLEVWLPSENRYREISSCSNCEAFQARRMQARWR 180 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 +P + + HTLNGSGVA+GR +IA++ENY NADGS+ +P LR YM + V+ Sbjct: 181 NPATGKPEPVHTLNGSGVAIGRAMIAVMENYQNADGSIAVPEALRRYMGGIEVL 234 >gi|255727556|ref|XP_002548704.1| hypothetical protein CTRG_03001 [Candida tropicalis MYA-3404] gi|240134628|gb|EER34183.1| hypothetical protein CTRG_03001 [Candida tropicalis MYA-3404] Length = 463 Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats. Identities = 125/436 (28%), Positives = 212/436 (48%), Gaps = 20/436 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKI----EDIRARRNSNSAQ 57 +DI I P ++++R L + + NR + ++ +++ RN S Sbjct: 31 IDINDIVNRPVEYKRSIERRLLSSKLIQNVDFIVSNRKIQIELYNQMNNLKRERNEISES 90 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL----EEV 113 + + + +K +K +L LEK+ E+ + +PN E+ Sbjct: 91 L-----KRGTGDLAMVKQRLEEIKSELKPLEKKWKELDEEIYIKAEALPNHVSQNAPEDP 145 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + K + +H IGE L ++DF +A+ +SG + L G A Sbjct: 146 LKESIDQFINCKSVNDPKLTPESSKYDHKTIGEELKIIDFQKASNVSGPSWYYLIGDGAL 205 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLI 229 LE+AL Q+ + +HGYT V P +VR E + G P ++ + + L Sbjct: 206 LEQALVQYALS-KARKHGYTMVIPPSIVRSEIVNACGFKPNDQNNEKQIYELEDEKKSLT 264 Query: 230 PTSEVSLTNLYSHEIIESK-SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 T+E+ L ++ I S P ++ ++ S+R+EAG++GRDT+G+ R H+F K EL Sbjct: 265 GTAEIPLAAFHASTIFSEDASFPKKYVGVSRSYRAEAGASGRDTKGLYRVHEFTKVELFH 324 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 T E S E +++ EI+ L L +V+++ T DLG A + YD+E W+ G+ + Sbjct: 325 FTTPERSSEELQQLKQMQVEIITELGLAAKVLNMPTSDLGSPAMQKYDIEAWMPGRGSWG 384 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSV 407 E++SCS CG++Q+RR+ RY+ P K TLNG+ +AV R ++A++E N D + Sbjct: 385 ELTSCSNCGDYQARRLGIRYKIPGETGSKHVSTLNGTAMAVPRVIVALIEQNYNPDTKEI 444 Query: 408 TIPTVLRPYMNNLAVI 423 IP VL+PYM+ I Sbjct: 445 AIPKVLQPYMDGKDKI 460 >gi|169766540|ref|XP_001817741.1| seryl-tRNA synthetase [Aspergillus oryzae RIB40] gi|83765596|dbj|BAE55739.1| unnamed protein product [Aspergillus oryzae] Length = 515 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 129/468 (27%), Positives = 209/468 (44%), Gaps = 48/468 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 D++ IRQN E R+ ++ I +L E+ R L + ++ R+R IG Sbjct: 45 DVKHIRQNAELYSKNSVDRNYPTHADYPFQIQNLSEEARRLDQDLKTPRSRIKQLEKAIG 104 Query: 60 QAIAEGNLS-----------LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A + AL+ E LK+ + + + +L +PN+ Sbjct: 105 KLAASARQEGGNGENTASQEELTALRLEAQKLKDDSQEMTTRKTACTEEINRLALSLPNL 164 Query: 109 PLEEVPIGTSANENILIRSVGKKPSAIHLSRE----HFEIGEALGLMDFDRATKLSGARF 164 E P+G + + P + + H IG +LGL+DF + +G + Sbjct: 165 SSSETPVGDDPRLVEYLNFDPQSPPEWIANPDPSRSHVAIGTSLGLIDFTSSATTTGWGW 224 Query: 165 SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT- 223 LT A LE+AL Q+ + + + G+ VS P +V G P+ + Sbjct: 225 YFLTNEGALLEQALIQYALSV-ARKRGWKPVSPPSIVYSYIAEACGFQPRDQHNEQQIWA 283 Query: 224 ----------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 R L T+E+ L +Y+ I++ +LP++ + +R+EAGS G DT+ Sbjct: 284 IEQSEKDKSKPQRSLAGTAEIPLAAMYAGRDIDAANLPVKLVGPSRCYRAEAGSRGVDTK 343 Query: 274 GMLRQHQFWKCELVSITR--EE-------DSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G+ R H+F K E+ + E S +LS EIL L+L RV+ + T Sbjct: 344 GLYRVHEFTKVEMFAWADNFPEAAGKGLPTSDDLFNELLSIQTEILTSLNLPCRVLEMPT 403 Query: 325 GDLGFSACKTYDLEVWLAGQ--------NLYREISSCSTCGNFQSRRMNSRYRDPNSKSL 376 DLG SA + D+E + + + E++S S C ++QSRR+ +R R +K Sbjct: 404 TDLGASASRKRDIEALFPSRLRAGADLESAWGEVTSASICTDYQSRRLGTRVRGGATKDS 463 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVI 423 +F HT+NG+ +AV R L AILEN + V +P VLR +M L VI Sbjct: 464 RFPHTVNGTAMAVPRVLAAILENGWDEKRKVVVVPEVLRNWMGGLEVI 511 >gi|238483271|ref|XP_002372874.1| seryl-tRNA synthetase [Aspergillus flavus NRRL3357] gi|220700924|gb|EED57262.1| seryl-tRNA synthetase [Aspergillus flavus NRRL3357] Length = 515 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 129/468 (27%), Positives = 209/468 (44%), Gaps = 48/468 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 D++ IRQN E R+ ++ I +L E+ R L + ++ R+R IG Sbjct: 45 DVKHIRQNAELYSKNSVDRNYPTHADYPFQIQNLSEEARRLDQDLKTPRSRIKQLEKAIG 104 Query: 60 QAIAEGNLS-----------LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A + AL+ E LK+ + + + +L +PN+ Sbjct: 105 KLAASARQEGGNGENTASQEELTALRLEAQKLKDDSQEMTTRKTACTEEINRLALSLPNL 164 Query: 109 PLEEVPIGTSANENILIRSVGKKPSAIHLSRE----HFEIGEALGLMDFDRATKLSGARF 164 E P+G + + P + + H IG +LGL+DF + +G + Sbjct: 165 SSSETPVGDDPRLVEYLNFDPQSPPEWIANPDPSRSHVAIGTSLGLIDFTSSATTTGWGW 224 Query: 165 SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT- 223 LT A LE+AL Q+ + + + G+ VS P +V G P+ + Sbjct: 225 YFLTNEGALLEQALIQYALSV-ARKRGWKPVSPPSIVYSYIAEACGFQPRDQHNEQQIWA 283 Query: 224 ----------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 R L T+E+ L +Y+ I++ +LP++ + +R+EAGS G DT+ Sbjct: 284 IEQSEKDKSKPQRSLAGTAEIPLAAMYAGRDIDAANLPVKLVGPSRCYRAEAGSRGVDTK 343 Query: 274 GMLRQHQFWKCELVSITR--EE-------DSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G+ R H+F K E+ + E S +LS EIL L+L RV+ + T Sbjct: 344 GLYRVHEFTKVEMFAWADNFPEAAGKGLPTSDDLFNELLSIQTEILTSLNLPCRVLEMPT 403 Query: 325 GDLGFSACKTYDLEVWLAGQ--------NLYREISSCSTCGNFQSRRMNSRYRDPNSKSL 376 DLG SA + D+E + + + E++S S C ++QSRR+ +R R +K Sbjct: 404 TDLGASASRKRDIEALFPSRLRAGADLESAWGEVTSASICTDYQSRRLGTRVRGGAAKDS 463 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVI 423 +F HT+NG+ +AV R L AILEN + V +P VLR +M L VI Sbjct: 464 RFPHTVNGTAMAVPRVLAAILENGWDEKRKVVVVPEVLRNWMGGLEVI 511 >gi|156552806|ref|XP_001599572.1| PREDICTED: similar to seryl-tRNA synthetase [Nasonia vitripennis] Length = 494 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 118/472 (25%), Positives = 205/472 (43%), Gaps = 53/472 (11%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R++ P+ + +KR + + ++ D+ R L + +++ +N S Sbjct: 3 LDLDLFREDKGFDPKKVRENQEKRFKDVGLVDTVIEKDKLWRQLRHRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNL---------SLVDALKNETST-----------------LKEQLPILEKE 90 IG+ + + S+ D L + ++ + E + +++ Sbjct: 63 VIGEKMKKKEPVGDDDSVPQSIADDLDAQVTSDNLKALTVTQIKRIRTLIDEAIAGNDQD 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + + N + VP+ EN + R+ G S + Sbjct: 123 LVKTEAQRNSALREVGNHLHQSVPVSNDEEENKVERTFGDTTQRKKYSHVDLIH--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 MD +R +SG R LTG LE AL Q + + GY + P +R +AM Sbjct: 181 MDGERGAAVSGGRGYFLTGAAVFLEHALIQLAL-RKLFDKGYKPLYTPFFMRKDAMQEVA 239 Query: 211 QIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ + ++LI TSE + + E I +LP+R+ L+ Sbjct: 240 QLSQFDEELYKVIGKGSEKGDEKELEEKYLIATSEQPIAAYHRGEWIPEATLPIRYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ E M+ AE+ + L++ Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPHDNKSWEMMEEMIRNAEDFYQELNIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YR+V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + Sbjct: 360 YRIVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLLVRYGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN--LAVIK 424 + H LN + AV R + A+LE G + +P + +M I Sbjct: 420 STDYVHMLNATMCAVTRVICAVLEINQTETG-IKVPKAIAQFMPTQYQEEIP 470 >gi|308161777|gb|EFO64212.1| Seryl-tRNA synthetase [Giardia lamblia P15] Length = 457 Score = 282 bits (721), Expect = 8e-74, Method: Composition-based stats. Identities = 116/453 (25%), Positives = 208/453 (45%), Gaps = 42/453 (9%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NPE + + ++R+ + + ++ LD+ + + N + Sbjct: 3 LDINLFRVSKGGNPEKIKESQRRRYASTEVVDKVIELDKAWVSKDYEASQLSKELNQLNK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 G A+ + + D L + ++ K++ ++KE ++ + +++ I N+ + V + Sbjct: 63 DFGAAVKAKSPT--DELSKKIASNKQETERVKKEVGQLLAERNAVLNTIGNIVSDTVVVD 120 Query: 117 TSANENILIRSV------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + N ++ + P+ + + H + +MD R K+SG R LTG+ Sbjct: 121 NNEDNNKVVYTNDAVIKANPSPNGVEKTLNHVTLMTNCRMMDCPRGVKISGNRGYFLTGY 180 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRW 227 A L +AL Q+ + T + GY + P + EAM Q+ F + ++ + + ++ Sbjct: 181 GALLNQALIQYALKFLT-DRGYQAMQTPFFMEQEAMSCCCQLEDFDEQLYKVSGEGNDKY 239 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLR----------------------FTTLAPSFRSEA 265 LI TSE L + E++ R + ++ FR E Sbjct: 240 LIATSEQPLCAYHMGEVVNFSKQGQRVELTYNSIKTGKQEKKTLECIRYAGMSTCFRKEV 299 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 G G DT G+ R HQF K E + + +EEDS+ E M+ L + YRVV + +G Sbjct: 300 GRHGHDTLGIFRIHQFEKIEQIVVCKEEDSWDMMEYMIDNCRAFFDSLMIPYRVVIIVSG 359 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS 385 L +A YDLE + G + YRE+ SCS C ++QSR ++ +Y+D K K+ H LN + Sbjct: 360 ALNNAAAMKYDLEAYFPGSDTYRELVSCSNCTDYQSRSLDIKYQD--GKDKKYVHLLNST 417 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 A R L ++ENY + G + +P L+ Y+ Sbjct: 418 LSATERTLCCLVENYQTSTG-IRVPVPLQSYVG 449 >gi|119491154|ref|XP_001263199.1| seryl-tRNA synthetase [Neosartorya fischeri NRRL 181] gi|119411359|gb|EAW21302.1| seryl-tRNA synthetase [Neosartorya fischeri NRRL 181] Length = 517 Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats. Identities = 127/473 (26%), Positives = 204/473 (43%), Gaps = 50/473 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IRQN E R+ ++ I L E+ R L + ++ R+R I Sbjct: 45 DIKHIRQNAELYSKNSVDRNYPAHADYPYKIQELSEEARRLDQDLKAPRSRIKQLEKTIA 104 Query: 60 QAIAEGNLS--------LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 A + +L++E LK++ + +++L +PN+ Sbjct: 105 NLAASARQDGASSAIEGELASLRSEAQRLKDESLAMNTRRTTCTEEIQRLALSLPNLSSP 164 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSRE----HFEIGEALGLMDFDRATKLSGARFSVL 167 + P+G I + P + H IG AL L+DF + +G + L Sbjct: 165 DTPVGDDPKLVTYINFDPQSPPEWISRPDLSRSHVAIGTALELIDFTSSATTTGWGWYFL 224 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---- 223 A LE+AL Q+ + + G+ VS P +V G P+ + Sbjct: 225 INEGALLEQALVQYALSV-ARNRGWKVVSPPSIVYSYIAEACGFQPRDQHNEQQIWAIEQ 283 Query: 224 -------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 R L T+E+ L +Y+ +++ SLPL+ + +R+EAGS G DT+G+ Sbjct: 284 SDKDKSKPQRSLTGTAEIPLAAMYAGRDLDASSLPLKLVGASRCYRAEAGSRGVDTKGLY 343 Query: 277 RQHQFWKCELVSITRE----EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 R H+F K EL S +L EIL L+L RV+ + T DLG SA Sbjct: 344 RVHEFTKVELFGWADTLPATRSSDDLFTELLDIQTEILTALNLPCRVLEMPTTDLGASAS 403 Query: 333 KTYDLEVWLAGQ------------------NLYREISSCSTCGNFQSRRMNSRYRDPNSK 374 + D+E + + + E++S S C ++QSRR+ +R R ++K Sbjct: 404 RKRDIEALFPSRLRAPGSGSGSGSSSPDLESGWGEVTSASICTDYQSRRLGTRVRGGSAK 463 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKKE 426 +F HT+NG+ +AV R L AILEN + V IP VLR +M + VI ++ Sbjct: 464 ESRFPHTVNGTAMAVPRVLAAILENGWDEKRKVVVIPEVLRKWMGGMEVIGEK 516 >gi|171690094|ref|XP_001909979.1| hypothetical protein [Podospora anserina S mat+] gi|170945002|emb|CAP71113.1| unnamed protein product [Podospora anserina S mat+] Length = 631 Score = 282 bits (720), Expect = 1e-73, Method: Composition-based stats. Identities = 131/462 (28%), Positives = 217/462 (46%), Gaps = 38/462 (8%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ IR NP+ R+ + +E I +L + + K +R R N ++ Sbjct: 169 LDIKHIRLNPDLYSQNCIDRNYKSLAEYPHKINTLFAEWQAQQKAGRALRERGNILRRRL 228 Query: 59 ---GQAIAEGNLSLV--------DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 G A + ++ + + E LK L +E+ E ++ + +++L IPN Sbjct: 229 AGPGGASRDDPREIIDEFGDMSREEILEEARKLKAGLAGIEETEGKLQAEMERLALAIPN 288 Query: 108 VPLEEVPIGTSANENILIRSVGKKPS--AIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 + +E P GT I + + + + R H +G LGL+DF A SG + Sbjct: 289 LTSDETPRGTEPEVMSYINNHPEPEPALSDRVWRSHVHVGAELGLLDFAGAASSSGWGWY 348 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA--------- 216 L A LE+AL + + T G+ +VS P +V G P+ A Sbjct: 349 YLLDEAADLEQALISYALATAT-RAGWRQVSPPSVVYGHIAAACGFQPRDANGETQIYAI 407 Query: 217 ----DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 +D L T+E+ L + + +++ LPL+ ++ +R+EAG+ G +T Sbjct: 408 AQSREDAARGKPELVLAGTAEIPLAGMKADTVLDEADLPLKRVAVSRCYRAEAGARGSET 467 Query: 273 RGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFS 330 +G+ R H+F K E+ S T + + + M+ EIL L LH RV+ + T DLG S Sbjct: 468 KGLYRVHEFTKVEMFSWTLPDQVETEEIFDEMIDLQTEILGGLGLHCRVLEMPTADLGAS 527 Query: 331 ACKTYDLEVWLAGQ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSG 386 A + D+E + + + + E++S S C ++Q+RR+ +R + K L + T+NG+ Sbjct: 528 ATRKCDIEAFFPSRRERNDGWGEVTSASICTDYQTRRLATRLKTKEGK-LVYPWTVNGTA 586 Query: 387 VAVGRCLIAILENYLNA-DGSVTIPTVLRPYMNNLAVIKKEH 427 +AV R L AILEN N + SV IP VLRP+M+ I H Sbjct: 587 LAVPRVLAAILENGWNESEKSVLIPEVLRPWMDGREKIGPRH 628 >gi|75765332|pdb|1WLE|A Chain A, Crystal Structure Of Mammalian Mitochondrial Seryl-Trna Synthetase Complexed With Seryl-Adenylate gi|75765333|pdb|1WLE|B Chain B, Crystal Structure Of Mammalian Mitochondrial Seryl-Trna Synthetase Complexed With Seryl-Adenylate Length = 501 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 126/443 (28%), Positives = 209/443 (47%), Gaps = 20/443 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD++ + PE AL R E I+S ++ R L ++I + + + + + Sbjct: 41 LDMESLCAYPEDAARALDLRKGELRSKDLPGIISTWQELRQLREQIRSLEEEKEAVTEAV 100 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + S V L+ +++QL +L +E ++ +PN + Sbjct: 101 RALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPD 160 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L VG KP+ R H EI E L ++ R + +SG R L G A Sbjct: 161 VPVGDESQARVLHV-VGDKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGA 219 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F ++ G+T ++ P L+R G G P + Sbjct: 220 LLQHGLVNFTLN-KLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLN 278 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ G+ R H F K E+ Sbjct: 279 LAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETDT-GKEPWGLYRVHHFTKVEMF 337 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 338 GVTGPGLEQSSELLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 397 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +FQSRR++ ++ + L+F HT+N +G AV R LIA+LE+Y DG Sbjct: 398 RFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATGCAVPRLLIALLESYQQKDG 456 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P L+PY+ + H+ Sbjct: 457 SVLVPPALQPYLGTDRITTPTHV 479 >gi|27806133|ref|NP_776882.1| seryl-tRNA synthetase, mitochondrial precursor [Bos taurus] gi|23822218|sp|Q9N0F3|SYSM_BOVIN RecName: Full=Seryl-tRNA synthetase, mitochondrial; AltName: Full=SerRSmt; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; Flags: Precursor gi|9188533|dbj|BAA99556.1| mitochondrial seryl-tRNA synthetase [Bos taurus] gi|61553472|gb|AAX46412.1| seryl-tRNA synthetase 2 [Bos taurus] gi|146186974|gb|AAI40549.1| SARS2 protein [Bos taurus] gi|296477779|gb|DAA19894.1| seryl-tRNA synthetase 2 precursor [Bos taurus] Length = 518 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 126/443 (28%), Positives = 209/443 (47%), Gaps = 20/443 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD++ + PE AL R E I+S ++ R L ++I + + + + + Sbjct: 58 LDMESLCAYPEDAARALDLRKGELRSKDLPGIISTWQELRQLREQIRSLEEEKEAVTEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + S V L+ +++QL +L +E ++ +PN + Sbjct: 118 RALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L VG KP+ R H EI E L ++ R + +SG R L G A Sbjct: 178 VPVGDESQARVLHV-VGDKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F ++ G+T ++ P L+R G G P + Sbjct: 237 LLQHGLVNFTLN-KLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ G+ R H F K E+ Sbjct: 296 LAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETDT-GKEPWGLYRVHHFTKVEMF 354 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 355 GVTGPGLEQSSELLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 414 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +FQSRR++ ++ + L+F HT+N +G AV R LIA+LE+Y DG Sbjct: 415 RFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATGCAVPRLLIALLESYQQKDG 473 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P L+PY+ + H+ Sbjct: 474 SVLVPPALQPYLGTDRITTPTHV 496 >gi|70999276|ref|XP_754357.1| seryl-tRNA synthetase [Aspergillus fumigatus Af293] gi|66851994|gb|EAL92319.1| seryl-tRNA synthetase [Aspergillus fumigatus Af293] gi|159127372|gb|EDP52487.1| seryl-tRNA synthetase [Aspergillus fumigatus A1163] Length = 517 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 128/473 (27%), Positives = 205/473 (43%), Gaps = 50/473 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IRQN E R+ ++ I L E+ R L + ++ R+R I Sbjct: 45 DIKHIRQNAELYSKNSVDRNYPTHADYPYKIQELSEEARRLDQDLKAPRSRIKQLEKTIA 104 Query: 60 QAIAEGN--------LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 A + +L++E LK++ + +++L +PN+ Sbjct: 105 NLAASARQNGASSAIEEELASLRSEAQRLKDESHAMNTRRTTCTEEIQRLALSLPNLSSA 164 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSRE----HFEIGEALGLMDFDRATKLSGARFSVL 167 + P+G I + P + H IG AL L+DF + +G + L Sbjct: 165 DTPVGDDPKLVTYINFDPQSPPEWVSRPDPSRSHVAIGTALELIDFTSSATTTGWGWYFL 224 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---- 223 T A LE+AL Q+ + + G+ VS P +V G P+ + Sbjct: 225 TNEGALLEQALVQYALSV-ARNRGWKVVSPPSIVYSYIAEACGFQPRDQHNEQQIWAIEQ 283 Query: 224 -------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 R L T+E+ L +Y+ +++ SLPL+ + +R+EAGS G DT+G+ Sbjct: 284 SDKDKSKPQRSLTGTAEIPLAAMYAGRDLDASSLPLKLVGASRCYRAEAGSRGVDTKGLY 343 Query: 277 RQHQFWKCELVSITRE----EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 R H+F K EL S +L EIL L+L RV+ + T DLG SA Sbjct: 344 RVHEFTKVELFGWADTLPATISSDNLFTELLDIQTEILTALNLPCRVLEMPTTDLGASAS 403 Query: 333 KTYDLEVWLAGQ------------------NLYREISSCSTCGNFQSRRMNSRYRDPNSK 374 + D+E + + + E++S S C ++QSRR+ +R R ++K Sbjct: 404 RKRDIEALFPSRLRVPGSSSGSGSSSPDLESGWGEVTSASICTDYQSRRLGTRVRGGSAK 463 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKKE 426 +F HT+NG+ +AV R L AILEN + V IP VLR +M + VI ++ Sbjct: 464 ESRFPHTVNGTAMAVPRVLAAILENGWDEKRKVVVIPEVLRKWMGGMEVIGEK 516 >gi|150865455|ref|XP_001384678.2| seryl-tRNA synthase-like protein [Scheffersomyces stipitis CBS 6054] gi|149386711|gb|ABN66649.2| seryl-tRNA synthase-like protein [Scheffersomyces stipitis CBS 6054] Length = 465 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 140/438 (31%), Positives = 233/438 (53%), Gaps = 23/438 (5%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ----SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 LDI + N E + ++++R L + YI+ K L +KI +R RN Sbjct: 36 LDINGVITNKEEYESSIRRRMLSEEYLTGLNYIVENRPKQLELSQKISLLRGERNVL--- 92 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 G+ + +G S ++K+ +++KE+L LE E + + + +PN+ VP T Sbjct: 93 -GEQMKKGKSS---SIKDRLTSIKEELKPLEVEAKTLTEEIYRRAEMLPNLLDSTVPKDT 148 Query: 118 SANENILIRSVGK----KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 N+ + +H IGE L +MDF+ A+++SG+ + L G A Sbjct: 149 LVNDIVEFIHCDSEEDAMRKLPKTEFDHKLIGEKLNIMDFETASRVSGSSWYYLIGDGAL 208 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLI 229 LE+AL Q+ + GY V P +VR E ++ G P+ ++ + R L Sbjct: 209 LEQALVQYGLS-KARRRGYKMVIPPSIVRSEIVHACGFKPQDQNNEKQIYELIDENRSLT 267 Query: 230 PTSEVSLTNLYSHEIIE-SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 T+E+ L L+S + + S + P+++ ++ S+R+EAG++G+DT+G+ R H+F K EL Sbjct: 268 GTAEIPLGALHSSTVFDTSTNFPIKYAGVSRSYRAEAGASGKDTKGLYRVHEFTKVELFH 327 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 T E+S E E + EI+ L L +V+++ T DLG A K YD+E W+ G+ + Sbjct: 328 FTTPENSSQELEELRQLQTEIITELGLSAKVLNMATSDLGSPAIKKYDIEAWMPGRGNWG 387 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE-NYLNADGSV 407 E++S S CG++QSRR+ R ++ + + HTLNG+ +AV R ++AI+E NY S+ Sbjct: 388 ELTSSSNCGDYQSRRLGIR-QNRKDQKVAHVHTLNGTCMAVPRVIVAIIEQNYDPETESI 446 Query: 408 TIPTVLRPYMNNLAVIKK 425 IP VLRPYM++ +VI K Sbjct: 447 KIPHVLRPYMDDKSVITK 464 >gi|158317501|ref|YP_001510009.1| seryl-tRNA synthetase [Frankia sp. EAN1pec] gi|158112906|gb|ABW15103.1| seryl-tRNA synthetase [Frankia sp. EAN1pec] Length = 430 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 174/431 (40%), Positives = 239/431 (55%), Gaps = 7/431 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ + AL +R + + + + + ++ +RA +A + Sbjct: 1 MHDVRELLDLSTKATAALARRGFDISLDELAAAHRRRTDREDRVARLRADLKRAAAAGAR 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G+ D ++ L+E + E + L +L+ IPN+P EE P G S Sbjct: 61 RTATGSADAAD--RDSARRLREAVRAAEADARSASEELTELLLAIPNLPSEEAPDGRSET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 E + +R+ G P +R H +G A G+ D A KLSGARFSV G A LERAL + Sbjct: 119 EAVEVRTGGPPPVPADDARHHATVGTATGVFDAAAAAKLSGARFSVARGAGARLERALVE 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLT 237 F++DLHT EHGY E S P LV + M GTGQ+PKF D+F T +LIPT+EV LT Sbjct: 179 FLLDLHTGEHGYVEYSVPYLVTRKTMTGTGQLPKFEADLFATQVGDREMFLIPTAEVPLT 238 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL++ E++ + LPL T + FR+EAGS G+DTRG+LR HQF K ELV I +++ Sbjct: 239 NLFAGEVVSPRQLPLALTARSACFRAEAGSYGKDTRGVLRLHQFEKVELVRICLLDETRD 298 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E + M+ EE L+RL L YRV+ L GDLGFSA T+D+EVWL G +REISS S CG Sbjct: 299 ELDVMVGHVEECLRRLGLTYRVMLLAAGDLGFSARLTFDVEVWLPGSGAFREISSVSDCG 358 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 FQ+RR R + + + + TLNGS + VGR L A+LE ADGSV +P L PY Sbjct: 359 AFQARRAGIRVQGRDGRRV-PAATLNGSALPVGRTLAALLEQGRQADGSVLLPEALVPY- 416 Query: 418 NNLAVIKKEHI 428 I+ Sbjct: 417 AGFRRIRPGGT 427 >gi|124511894|ref|XP_001349080.1| seryl-tRNA synthetase, putative [Plasmodium falciparum 3D7] gi|23498848|emb|CAD50925.1| seryl-tRNA synthetase, putative [Plasmodium falciparum 3D7] Length = 539 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 137/536 (25%), Positives = 223/536 (41%), Gaps = 115/536 (21%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R+ NP+ + + +KR+ + + ++ D+K R I ++E+++ N + Sbjct: 3 LDINLFRKEKGGNPDKIKESERKRYHDENNVDKVIEYDDKWRKCIFELEELKKNINMINK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +IG + V+ LK ++ +KE++P + +E E+ K IS I N+ +V Sbjct: 63 EIGNKKKVDKNADVEDLKKKSLNIKEEIPKYQLKEKELLKERNKYISKIGNLLNIKVVCS 122 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGE------------------------------ 146 + + N ++++ G+ I + Sbjct: 123 DNEDNNKIVKTWGECKILPACEENDNSIHDNVVNSNNIKRETLNNEVDNKKKIKYYYHYD 182 Query: 147 ---ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRD 203 +G +F + +++G R LTG L A+ Q+ ++ Y V P ++ Sbjct: 183 LLRKIGGANFKKGIQVAGHRGYYLTGAGFLLHNAILQYALNF-LVNKKYIPVYPPFFMKK 241 Query: 204 EAMYGTGQIPKFADDMFCTT---------------------------------------- 223 M ++ F + ++ Sbjct: 242 NIMEECAELDDFEETLYKIPSTSNSTLSSQQVSTSPTKISSQADIKDDTTCNSQKKTNIP 301 Query: 224 -------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 D +LI TSE L L+ E IESK LPL++ + FR EAG+ G+D RG+L Sbjct: 302 SNEDLTRDDLFLIATSEQPLCALHKDETIESKRLPLKYAGFSSCFRKEAGAHGKDIRGIL 361 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E I + S HE M+ EE + L++ YR+VS+ +G L +A YD Sbjct: 362 RVHQFDKVEQFCIALPQHSNKIHEEMIQTCEEFYQSLNIPYRIVSIVSGALNNAASIKYD 421 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDP------------------------- 371 LE + N YRE+ SCS C ++QS +N RY D Sbjct: 422 LEGFFPTSNQYRELVSCSNCTDYQSINLNIRYSDSSIKINDLNKNTNLNDEMDSEYEHFL 481 Query: 372 ---NSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 N+++ H LNG+ VA R L +LENY N +G + +P LRPYMNN+ I Sbjct: 482 TNFNTENKYHVHLLNGTMVAAQRFLCCLLENYQNGEG-IVVPEKLRPYMNNMDFIP 536 >gi|332374480|gb|AEE62381.1| unknown [Dendroctonus ponderosae] Length = 492 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 123/463 (26%), Positives = 205/463 (44%), Gaps = 51/463 (11%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + P+ + KKR+ + + +++ D R L K ++ +N S Sbjct: 3 LDLDLFRTDKGGDPDKIRAIQKKRYKDVGLVDEVVAKDTLWRQLRHKADNWNKLKNVCSK 62 Query: 57 QIGQAIA------EGNLSLVDALKNE-------------TSTLK-------EQLPILEKE 90 IG+ + EG S ++ + + + +K E + + E Sbjct: 63 AIGEKMKNKVAQVEGEQSALEEVTAQLDSLTLDTLKPLSVAQIKKVRTLIDEAVLSNDSE 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 +++ I N+ E VP+ + + N + R+ G S + Sbjct: 123 LLRAEKKRNEVLKEIGNLLHESVPVDDNEDNNKVERTFGDCEIRKKYSHVDLIC--MIDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 +D +R T +SG R LTG LE+AL QF + GY + P ++ E M Sbjct: 181 VDTERGTVVSGGRGYYLTGPAVFLEQALVQFAL-RQLLVKGYKPLYTPFFMKKEIMQEVA 239 Query: 211 QIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 Q+ +F ++++ D ++LI TSE + + E + LP+R+ L+ Sbjct: 240 QLSQFDEELYKVIGKSSENAESKEVDEKYLIATSEQPIAAFHRDEWLPESVLPIRYAGLS 299 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLH 316 FR E GS GRDTRG+ R HQF K E +T S+ + M+ AE + L++ Sbjct: 300 TCFRQEVGSHGRDTRGIFRVHQFEKVEQFCLTSPFDNKSWEMMDEMIGNAEAFYQALEIP 359 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS- 375 YRVV++ +G L +A K DLE W G +RE+ SCS C +Q+RR+ RY + Sbjct: 360 YRVVNIVSGALNNAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNA 419 Query: 376 -LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + H LN + A R + AILE + +G + +P LR ++ Sbjct: 420 ATDYVHMLNATMCATTRVICAILEVHQTEEG-IRVPAGLRDFL 461 >gi|317499279|ref|ZP_07957552.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893448|gb|EFV15657.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 324 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 108/326 (33%), Positives = 163/326 (50%), Gaps = 4/326 (1%) Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG 161 + IPN+ VPIG +EN+ + G+ H EI E+ +D D A K++G Sbjct: 1 MMTIPNIIDPSVPIGKDDSENVELERFGEPVVPDFEVPYHTEIMESFDGIDLDSARKVAG 60 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 F L G +A L A+ + D + G+T P ++R + G + M+ Sbjct: 61 NGFYYLMGDIARLHSAVITYARDFMI-DRGFTYCVPPFMIRSNVVTGVMSFDEMDAMMYK 119 Query: 222 TT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 + +LI TSE S+ + E LP T+ +P FR E G+ G + RG+ R HQ Sbjct: 120 IEGEDLYLIGTSEHSMIGKFIDTTTEEAELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQ 179 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E++ + + E+S +E++ ++ + +D+ R + C+GDL K+ D+E W Sbjct: 180 FEKQEMIVVCKPEESKDWYEKLWKNTVDLFRSMDIPVRTLECCSGDLADLKVKSVDVEAW 239 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 Q Y E+ SCS G+ Q+RR+ R + N F HTLN + VA R LIA LEN Sbjct: 240 SPRQKKYFEVGSCSNLGDAQARRLRIRIKGENGN--YFAHTLNNTVVAPPRMLIAFLENN 297 Query: 401 LNADGSVTIPTVLRPYMNNLAVIKKE 426 L DGSV IP VLRPYM ++ + Sbjct: 298 LREDGSVAIPEVLRPYMGGKESLQPK 323 >gi|121705988|ref|XP_001271257.1| seryl-tRNA synthetase [Aspergillus clavatus NRRL 1] gi|119399403|gb|EAW09831.1| seryl-tRNA synthetase [Aspergillus clavatus NRRL 1] Length = 517 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 129/473 (27%), Positives = 208/473 (43%), Gaps = 50/473 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 D++ IRQN E +R+ +E IL L E+ R L + ++ R+R I Sbjct: 45 DVKSIRQNAELYSKNSVERNYPSHAEYPYKILELSEEARRLDQDLKSPRSRIKQLEKTIA 104 Query: 60 QAIAEGNL--------SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + + AL++E LK++ + +++L +PN+ Sbjct: 105 KLASSARQDASSSASGEELAALRSEAQQLKDESHTMTTRRTTCTEEIQRLALSLPNLSSP 164 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSRE----HFEIGEALGLMDFDRATKLSGARFSVL 167 E P+G A I + P + H IG AL L+DF + +G + L Sbjct: 165 ETPVGDDARLVTYINFDPQSPPEWISHPDPSRSHVAIGTALDLIDFTSSATTTGWGWYFL 224 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---- 223 A LE+AL Q+ + + G+ VS P +V G P+ + Sbjct: 225 INEGALLEQALVQYALSV-ARSRGWKVVSPPSIVYSYIAEACGFQPRDQHNEQQIWAIEQ 283 Query: 224 -------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 R L T+E+ L +Y+ +++ +LPL+ + +R+EAGS G DT+G+ Sbjct: 284 SDKDKSKPQRSLTGTAEIPLAAMYAGRDLDASTLPLKLVGASRCYRAEAGSRGVDTKGLY 343 Query: 277 RQHQFWKCELVSITRE---------EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 R H+F K EL + S +L EIL L+L RV+ + T DL Sbjct: 344 RVHEFTKVELFAWADNLPAGETPSSPSSDDLFTELLDIQTEILTSLNLPCRVLEMPTTDL 403 Query: 328 GFSACKTYDLEVWLAGQ-------------NLYREISSCSTCGNFQSRRMNSRYRDPNSK 374 G SA + D+E + + + E++S S C ++QSRR+ +R R ++K Sbjct: 404 GASASRKRDIEALFPSRLRAPAAGAESDLESGWGEVTSASICTDYQSRRLGTRVRGSSAK 463 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKKE 426 +F HT+NG+ +AV R L AILEN + V IP VLR +M L I ++ Sbjct: 464 DSRFPHTVNGTAMAVPRVLAAILENGWDEKRKVVVIPEVLRKWMGGLEAIGQK 516 >gi|322804794|emb|CBZ02347.1| seryl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 321 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 115/324 (35%), Positives = 164/324 (50%), Gaps = 4/324 (1%) Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG 161 + IPN+ VPIG +EN+ I+ G+ H EI E +D D A K++G Sbjct: 1 MITIPNIIDPSVPIGKDDSENVEIQRYGEPVVPDFEVPYHTEIMEKFNGIDLDSARKVAG 60 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 F L G +A L A+ + D G+T P ++R E + G + M+ Sbjct: 61 NGFYYLMGDIARLHSAVISYARDFMI-NRGFTYCIPPFMIRSEVVTGVMSFAEMDSMMYK 119 Query: 222 TT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 + +LI TSE S+ + I SLP T+ +P FR E G+ G + RG+ R HQ Sbjct: 120 IEGEDLYLIGTSEHSMIGKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQ 179 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E++ + + EDS ++++ + + LD+ R + C+GDL K+ D+E W Sbjct: 180 FEKQEMIVVCKPEDSVMWYDKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSVDVEAW 239 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 Q Y E+ SCS G+ Q+RR+ R N K F HTLN + VA R LIA LEN Sbjct: 240 SPRQKKYFEVGSCSNLGDAQARRLKIRVAGENGK--YFAHTLNNTVVAPPRMLIAFLENN 297 Query: 401 LNADGSVTIPTVLRPYMNNLAVIK 424 LN DGSV IP L+PYM + VIK Sbjct: 298 LNEDGSVNIPVPLQPYMGGMTVIK 321 >gi|242008599|ref|XP_002425090.1| Seryl-tRNA synthetase, putative [Pediculus humanus corporis] gi|212508755|gb|EEB12352.1| Seryl-tRNA synthetase, putative [Pediculus humanus corporis] Length = 490 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 119/459 (25%), Positives = 203/459 (44%), Gaps = 47/459 (10%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R N + + +KR E ++S D K R +++ +N S Sbjct: 3 LDLDLFRSDKGGNVDKVKENQQKRFKNVALVEEVISCDTKWREARHVADNLNKIKNLCSK 62 Query: 57 QIGQAIAEGN-----LSLVDALKNE-------------TSTLK-------EQLPILEKEE 91 IG+ + ++ +++ + + +K ++ E Sbjct: 63 AIGEKMKNKESPGGGDAVPESILQKLSLLTLDDVKPLTVNQIKLIREAVDKKTEENNDEM 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 + + + N VPI +EN + R+ G + S + M Sbjct: 123 SRLEKQRNSALREVGNHLHSSVPISNDEDENKVERTFGDCSTKKKYSHVDLIH--MIDGM 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D DR +SG R L G L+ AL Q + + G+ + P ++ E M Q Sbjct: 181 DGDRGANISGGRGYYLKGAAVFLQHALIQLSL-KMLLKKGFQPLYTPFFMKKEVMQEVAQ 239 Query: 212 IPKFADDMFCTT---------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFR 262 + +F ++++ T + ++LI TSE + + E I +LP+++ ++ FR Sbjct: 240 LSQFDEELYKVTGKGSEKGGVEEKYLIATSEQPIAAFHRDEWIPENNLPIKYAGISTCFR 299 Query: 263 SEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVV 320 E GS GRDTRG+ R HQF K E +T S+ + M+ AEE + L + YRVV Sbjct: 300 QEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNAEEFCQSLGIPYRVV 359 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS--LKF 378 ++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY + ++ Sbjct: 360 NIVSGALNHAASKKLDLEAWFPGSEAFRELVSCSNCLDYQARRLLVRYGQTKKMNAATEY 419 Query: 379 THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 H LN + AV R + A+LE + +G +T+PTVL+ +M Sbjct: 420 VHMLNATMCAVTRVICAVLEVHQGEEG-ITVPTVLKEFM 457 >gi|190346699|gb|EDK38847.2| hypothetical protein PGUG_02945 [Meyerozyma guilliermondii ATCC 6260] Length = 462 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 125/434 (28%), Positives = 222/434 (51%), Gaps = 21/434 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNR---ILIKKIEDIRARRNSNSAQ 57 LDI+ I + ++ KR L + + + E+ L K+I+ +R R + Sbjct: 38 LDIKSIIARKDEYRDSINKRKLPQSYVQNLEDIVERRNHEVELAKQIDSLRHER----SI 93 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +G+A+ + +K LK QL LE++ E+ S + +PN+ + Sbjct: 94 MGEAMKKEKSP---QIKESLIELKSQLKYLEEQHKELSSEILDKAEGLPNLIDPTIAESE 150 Query: 118 SANENILIRSVGKKPSAIHL--SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 + + K +I + +H EI E L ++DF A K+SG+ + L G A LE Sbjct: 151 AEIVQFINCESEKDAVSIKPATTFDHREIAENLSIVDFQSAAKVSGSSWYYLIGDGALLE 210 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPT 231 +AL Q+ + ++GY V+ P +V++E ++ G P ++ L T Sbjct: 211 QALVQYGL-KKARQYGYRMVTPPSIVKNEFVHACGFKPNDQNNEKQIYGIEGGNLSLTGT 269 Query: 232 SEVSLTNLYSHEIIESKS-LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 +E+ L ++S E+ P+++ ++ ++R+EAG+ G+DT+G+ R H+F K EL T Sbjct: 270 AEIPLGAIHSGTDFENGQKFPIKYVGVSRAYRAEAGARGKDTKGLYRVHEFTKVELFHFT 329 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E + E E + EI++ L L +++ + DLG A YD E W+ G+ + E+ Sbjct: 330 TPEYAKQELEDLRQLQTEIIEELGLMSKMIKMPADDLGAPALMKYDCEAWMPGRGNWGEL 389 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA-DGSVTI 409 +S S CG++Q+RR+ RYR+ ++K L+F HTLNG+ +AV R ++AI+E + + ++ I Sbjct: 390 TSSSNCGDYQARRLGIRYRNSDNK-LQFVHTLNGTCMAVPRVIVAIIEQFYDEATNTIKI 448 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM+ I Sbjct: 449 PPVLQEYMDGKDAI 462 >gi|164422793|ref|XP_963172.2| hypothetical protein NCU09594 [Neurospora crassa OR74A] gi|157069824|gb|EAA33936.2| hypothetical protein NCU09594 [Neurospora crassa OR74A] Length = 551 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 130/467 (27%), Positives = 214/467 (45%), Gaps = 44/467 (9%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQI- 58 DI+ IRQNP+ R+ Q+ + I L + + ++ +R R N Q+ Sbjct: 75 DIKHIRQNPDLYAQNCIDRNYHQQASYPQRINDLHAQWQAKQREARSLRERSNILRRQLT 134 Query: 59 -GQAIAEGNLSLV---------DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 +I + N + D L E LK L +E EE + S ++ L IPN+ Sbjct: 135 DPGSIRDENADTIAAGTKFLTRDELIAEARKLKSLLSTIEAEETRILSEIESLALAIPNL 194 Query: 109 PLEEVPIGTSAN--ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 EE P G I ++ + R H IG LGL+DF A SG + Sbjct: 195 TSEESPRGPEPKLLSLINEHPEPVPSASDRVWRSHVHIGNELGLLDFASAGTTSGWGWYF 254 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA---------- 216 L A LE+AL + +DL G+ +VS P +V G P+ Sbjct: 255 LLDEAAQLEQALIAYALDLAVRS-GWRQVSPPSMVYSHIASACGFQPRDQNGETQIYALA 313 Query: 217 ---DDMFCTTDGRWLIPTSEVSLTNLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSA 268 DD + TSE+ L +++ +++ S+ PL++ ++ +R+EAGS Sbjct: 314 QSADDAARGKPELSMAGTSEIPLAGMHASKMLLCPGDISEFSPLKYVAVSRCYRAEAGSR 373 Query: 269 GRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 G +T+G+ R H+F K EL T + + ++ ++L L LH RV+ + T D Sbjct: 374 GLETKGLYRVHEFTKVELFGWTYPSLDSATDVFNEIVDLQTDLLSSLGLHCRVLEMPTHD 433 Query: 327 LGFSACKTYDLEVWLAGQ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK--FTH 380 LG SA + D+E + + + E++S S C ++Q+RR+ +R + + K ++ + Sbjct: 434 LGASATRKIDIEAFFPSRRERNEGWGEVTSASICTDYQARRLATRLKGEDGKMIEGGYPF 493 Query: 381 TLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKKE 426 T+NG+ +AV R L A+LEN + + G+V IP VLR +M I + Sbjct: 494 TVNGTAMAVPRVLAALLENGWDEETGTVVIPEVLRGWMGGKERIGPK 540 >gi|28881119|emb|CAD70291.1| related to mitochondrial serine--tRNA ligase [Neurospora crassa] Length = 544 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 130/467 (27%), Positives = 214/467 (45%), Gaps = 44/467 (9%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQI- 58 DI+ IRQNP+ R+ Q+ + I L + + ++ +R R N Q+ Sbjct: 68 DIKHIRQNPDLYAQNCIDRNYHQQASYPQRINDLHAQWQAKQREARSLRERSNILRRQLT 127 Query: 59 -GQAIAEGNLSLV---------DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 +I + N + D L E LK L +E EE + S ++ L IPN+ Sbjct: 128 DPGSIRDENADTIAAGTKFLTRDELIAEARKLKSLLSTIEAEETRILSEIESLALAIPNL 187 Query: 109 PLEEVPIGTSAN--ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 EE P G I ++ + R H IG LGL+DF A SG + Sbjct: 188 TSEESPRGPEPKLLSLINEHPEPVPSASDRVWRSHVHIGNELGLLDFASAGTTSGWGWYF 247 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA---------- 216 L A LE+AL + +DL G+ +VS P +V G P+ Sbjct: 248 LLDEAAQLEQALIAYALDLAVRS-GWRQVSPPSMVYSHIASACGFQPRDQNGETQIYALA 306 Query: 217 ---DDMFCTTDGRWLIPTSEVSLTNLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSA 268 DD + TSE+ L +++ +++ S+ PL++ ++ +R+EAGS Sbjct: 307 QSADDAARGKPELSMAGTSEIPLAGMHASKMLLCPGDISEFSPLKYVAVSRCYRAEAGSR 366 Query: 269 GRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 G +T+G+ R H+F K EL T + + ++ ++L L LH RV+ + T D Sbjct: 367 GLETKGLYRVHEFTKVELFGWTYPSLDSATDVFNEIVDLQTDLLSSLGLHCRVLEMPTHD 426 Query: 327 LGFSACKTYDLEVWLAGQ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK--FTH 380 LG SA + D+E + + + E++S S C ++Q+RR+ +R + + K ++ + Sbjct: 427 LGASATRKIDIEAFFPSRRERNEGWGEVTSASICTDYQARRLATRLKGEDGKMIEGGYPF 486 Query: 381 TLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKKE 426 T+NG+ +AV R L A+LEN + + G+V IP VLR +M I + Sbjct: 487 TVNGTAMAVPRVLAALLENGWDEETGTVVIPEVLRGWMGGKERIGPK 533 >gi|205355961|ref|ZP_03222729.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346085|gb|EDZ32720.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421] Length = 263 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 140/264 (53%), Positives = 180/264 (68%), Gaps = 3/264 (1%) Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 R K+S +RF VL A L RAL +MID + G+ V+ P LV M+GTGQ+PK Sbjct: 2 RGVKISQSRFCVLKNEGALLSRALVNYMIDFN-RSRGFEFVNVPFLVNGATMFGTGQLPK 60 Query: 215 FADDMFCTTD-GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 F +DM+ D +LI TSE+ +TNLYS EI+ S++LP++ T + FR EAGSAGRDTR Sbjct: 61 FKEDMYKVDDEDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTR 120 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 G++RQHQF K ELVSIT+ E S + ML CA ++L L L +R + LCTGDLGFSA K Sbjct: 121 GIIRQHQFEKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAK 180 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 T DLEVWL GQN YREISS S C +FQ+RR RY++ K+ + HTLNGS +AVGR L Sbjct: 181 TVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKN-ELVHTLNGSSLAVGRTL 239 Query: 394 IAILENYLNADGSVTIPTVLRPYM 417 +AI+ENY + +G + IP VL+ Y Sbjct: 240 VAIMENYQDKEGKIHIPDVLKKYF 263 >gi|302901853|ref|XP_003048525.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729458|gb|EEU42812.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 499 Score = 280 bits (715), Expect = 4e-73, Method: Composition-based stats. Identities = 132/451 (29%), Positives = 217/451 (48%), Gaps = 33/451 (7%) Query: 3 DIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IRQNP+ +R+ IL L K + L ++ +R R N Q+ Sbjct: 40 DIKEIRQNPDLYQQTCVERNYRRQAQNPAQILELHAKWQDLQRQGRALRERSNLLRRQLA 99 Query: 60 QAIAEGNLSLVDALK--------NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + +K E TLK+QL ++EK E + + +++L +PN+ Sbjct: 100 NPATSSDDEDLKEVKQLTREQIQEEARTLKQQLSMIEKGESQAVTKMEELALELPNLTHP 159 Query: 112 EVPIGTSAN--ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 + P G I + ++ + R H IG LG+ DF A SG + L G Sbjct: 160 DTPKGDQPEVLSYINDPPIFQESPEDKIWRSHVHIGSELGIFDFAGAATASGWGWYYLLG 219 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA------------- 216 A LE+AL Q+ + + T HG+T+V+ P +V G P+ Sbjct: 220 EAAQLEQALVQYALAVAT-RHGWTQVAPPSMVYSHIGAACGFQPRDQNGEQQVYTISQSA 278 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 +D+ L TSE++L + ++ I+ + LPL+ ++ +R+EAG+ G DT+G+ Sbjct: 279 EDIERGVPEMCLTGTSEIALAGMKANTTIDPEDLPLKRVAVSRCYRAEAGARGADTKGLY 338 Query: 277 RQHQFWKCELVSIT--REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 R H+F K E+ + T E+ + + ML EIL L L+ R++S+ DLG SA + Sbjct: 339 RVHEFTKVEMFAWTAADEDLAQDLFDEMLDMQTEILSSLGLYCRILSMPAHDLGASATRK 398 Query: 335 YDLEVWLAGQ-NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 D+E + + + E++S S C ++Q+RR+ +R R L F T NG+ +AV R L Sbjct: 399 IDMEAFFPSRKGNWGEVTSASMCTDYQTRRLGTRTRV--DGRLSFPWTTNGTALAVPRVL 456 Query: 394 IAILENYLNAD-GSVTIPTVLRPYMNNLAVI 423 AILEN + + +V +P LRP+M+ I Sbjct: 457 AAILENGWDEEAKTVAVPECLRPWMDGKEKI 487 >gi|119577249|gb|EAW56845.1| seryl-tRNA synthetase 2, isoform CRA_b [Homo sapiens] Length = 539 Score = 280 bits (715), Expect = 4e-73, Method: Composition-based stats. Identities = 124/443 (27%), Positives = 202/443 (45%), Gaps = 20/443 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDIERFCACPEEAAHALELRKGELRSADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +A + V L+ ++++L L E ++ +PN + Sbjct: 118 RALLANQDSGEVQQDPKYQGLRARGREIRKELVHLYPREAQLEEQFYLQALKLPNQTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L VG KP R H EIGE L ++ R + +SG R L G A Sbjct: 178 VPVGDESQARVLHM-VGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F + G+T ++ P L+R G G P Sbjct: 237 LLQHGLVNFTFNKLL-RRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ RG+ R H F K + Sbjct: 296 LAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCYRAETNT-GQEPRGLYRVHHFTKAGMF 354 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 355 GVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 414 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +FQSRR++ ++ + L+F HT+N + AV R LIA+LE+ DG Sbjct: 415 RFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATACAVPRLLIALLESNQQKDG 473 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P L+ Y+ + H+ Sbjct: 474 SVLVPPALQSYLGTDRITAPTHV 496 >gi|119577252|gb|EAW56848.1| seryl-tRNA synthetase 2, isoform CRA_d [Homo sapiens] Length = 518 Score = 280 bits (715), Expect = 4e-73, Method: Composition-based stats. Identities = 124/443 (27%), Positives = 202/443 (45%), Gaps = 20/443 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDIERFCACPEEAAHALELRKGELRSADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +A + V L+ ++++L L E ++ +PN + Sbjct: 118 RALLANQDSGEVQQDPKYQGLRARGREIRKELVHLYPREAQLEEQFYLQALKLPNQTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L VG KP R H EIGE L ++ R + +SG R L G A Sbjct: 178 VPVGDESQARVLHM-VGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F + G+T ++ P L+R G G P Sbjct: 237 LLQHGLVNFTFNKLL-RRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ RG+ R H F K + Sbjct: 296 LAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCYRAETNT-GQEPRGLYRVHHFTKAGMF 354 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 355 GVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 414 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +FQSRR++ ++ + L+F HT+N + AV R LIA+LE+ DG Sbjct: 415 RFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATACAVPRLLIALLESNQQKDG 473 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P L+ Y+ + H+ Sbjct: 474 SVLVPPALQSYLGTDRITAPTHV 496 >gi|239934287|ref|ZP_04691240.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291442737|ref|ZP_06582127.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291345632|gb|EFE72588.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 424 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 186/434 (42%), Positives = 247/434 (56%), Gaps = 14/434 (3%) Query: 1 MLDIQWIRQ-NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI+ + PE + ++ + + + +K + D+RA S G Sbjct: 1 MHDIRELLDLGPEAVRRLARR-RYALDPAVLAAAHRRRGTAVKAVSDLRAELREASRGHG 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 G S + + + L+E++ E H + L +L+ IPN+PL+EVP G S Sbjct: 60 -----GKPS--EQAREKARRLRERVQEAEAAAHAAGAELTELLLPIPNLPLDEVPDGHSD 112 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 E + +R G R H ++GEAL ++D A +LSGARF+V G A LERAL Sbjct: 113 QEAVEVRRGGPPVGERTGDRHHADLGEALNILDSSSAARLSGARFTVARGPGARLERALA 172 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL 236 F +DLHT EHGYTE S P LV EAM GTGQ+PKF DD+F T +L+PT+EV L Sbjct: 173 GFFLDLHTLEHGYTEYSVPYLVNREAMTGTGQLPKFEDDLFATRVGDRELFLVPTAEVPL 232 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNL + +++ + LPL FT+ P FR+EAGS GRDTRG+LR HQF K ELV + ED+ Sbjct: 233 TNLVAGQLLPAADLPLAFTSRTPCFRAEAGSYGRDTRGILRLHQFEKVELVRVCAVEDAP 292 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + E ML+ AEE L+RL+L YRVV L GDLGFSA TYD+EVWL G +REISS S C Sbjct: 293 AQLELMLAHAEECLRRLELSYRVVLLPAGDLGFSARMTYDIEVWLPGSGAFREISSVSDC 352 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G FQ+RR R R P + TLNGS + VGR L A+LE DGSV +P L+ Y Sbjct: 353 GTFQARRAGIRVRTPGGDK-EPAATLNGSALPVGRTLAALLEQGQRPDGSVELPKALQSY 411 Query: 417 MNNLAVIKKEHILE 430 + I + + Sbjct: 412 -AGFSRILPDGTTD 424 >gi|261872054|gb|ACY02861.1| seryl-tRNA synthetase 2 [Streptomyces sp. ATCC 700974] Length = 428 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 148/440 (33%), Positives = 217/440 (49%), Gaps = 27/440 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEY----ILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD+ IR++ AL KR + E I+ LD R L+ +I +R A Sbjct: 1 MLDLDLIRKDRAATAAALAKRLDAAEVERALSAIVELDASRRDLVGRI--AEEQRKRKEA 58 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 A A+ + + K ++L+EQL +E E L++ +S +PN+P ++ Sbjct: 59 ARAYAAAKRESAEPLPPPEDTKAILASLEEQLTKVEAE-------LREEMSALPNLPADD 111 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 V G + +L + +H + + GL+DFDR TKL GA + + TG+ A Sbjct: 112 VVAGGKESNRVLREW--GTKPTLSPVVDHTTVAKEYGLVDFDRGTKLGGAGYWMYTGYGA 169 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 LE AL + ID H GYT + P ++ + A + GQ PKF DD++ ++ Sbjct: 170 RLEWALLNWFIDQHI-AAGYTFLLPPHMLLESAGFAAGQFPKFRDDVYHIANPDSHRPQF 228 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L+PTSE ++ + EI LP R P +R E A D RG +R HQF K E+ Sbjct: 229 LLPTSETAILGAHQDEIFAEADLPHRAFAYTPCYRRERAGAHSDERGTVRGHQFNKVEIF 288 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK-TYDLEVWLAGQNL 346 T E + + M+ AE +L+ L LHYR L GD S K D+EVW+ Sbjct: 289 QFTTPEGAPAAFDAMVRQAESLLEGLGLHYRTSLLAAGDASASMRKIRLDVEVWMPHVGG 348 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 Y+E+SS S G++Q+RR RYR K KF HTLNGS +A R L AILE + DGS Sbjct: 349 YKEVSSVSWAGDYQARRAAIRYRPAQGK-TKFLHTLNGSALATSRILPAILEQHQQEDGS 407 Query: 407 VTIPTVLRPYMNNLAVIKKE 426 V +P VLR + +++ + Sbjct: 408 VLVPEVLRDRVGTDRLVRPK 427 >gi|146418501|ref|XP_001485216.1| hypothetical protein PGUG_02945 [Meyerozyma guilliermondii ATCC 6260] Length = 462 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 125/434 (28%), Positives = 222/434 (51%), Gaps = 21/434 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNR---ILIKKIEDIRARRNSNSAQ 57 LDI+ I + ++ KR L + + + E+ L K+I+ +R R + Sbjct: 38 LDIKSIIARKDEYRDSINKRKLPQSYVQNLEDIVERRNHEVELAKQIDSLRHER----SI 93 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +G+A+ + +K LK QL LE++ E+ S + +PN+ + Sbjct: 94 MGEAMKKEKSP---QIKESLIELKLQLKYLEEQHKELSSEILDKAEGLPNLIDPTIAESE 150 Query: 118 SANENILIRSVGKKPSAIHL--SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 + + K +I + +H EI E L ++DF A K+SG+ + L G A LE Sbjct: 151 AEIVQFINCESEKDAVSIKPATTFDHREIAENLSIVDFQSAAKVSGSSWYYLIGDGALLE 210 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPT 231 +AL Q+ + ++GY V+ P +V++E ++ G P ++ L T Sbjct: 211 QALVQYGL-KKARQYGYRMVTPPSIVKNEFVHACGFKPNDQNNEKQIYGIEGGNLSLTGT 269 Query: 232 SEVSLTNLYSHEIIESKS-LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 +E+ L ++S E+ P+++ ++ ++R+EAG+ G+DT+G+ R H+F K EL T Sbjct: 270 AEIPLGAIHSGTDFENGQKFPIKYVGVSRAYRAEAGARGKDTKGLYRVHEFTKVELFHFT 329 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E + E E + EI++ L L +++ + DLG A YD E W+ G+ + E+ Sbjct: 330 TPEYAKQELEDLRQLQTEIIEELGLMSKMIKMPADDLGAPALMKYDCEAWMPGRGNWGEL 389 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA-DGSVTI 409 +S S CG++Q+RR+ RYR+ ++K L+F HTLNG+ +AV R ++AI+E + + ++ I Sbjct: 390 TSSSNCGDYQARRLGIRYRNSDNK-LQFVHTLNGTCMAVPRVIVAIIEQFYDEATNTIKI 448 Query: 410 PTVLRPYMNNLAVI 423 P VL+ YM+ I Sbjct: 449 PPVLQEYMDGKDAI 462 >gi|194215406|ref|XP_001496860.2| PREDICTED: similar to mitochondrial seryl-tRNA synthetase [Equus caballus] Length = 509 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 116/443 (26%), Positives = 201/443 (45%), Gaps = 24/443 (5%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD++ + PE AL+ R E + E I+S ++ R L +I+ + + + + + Sbjct: 58 LDMELLCACPEEAARALEHRKGELRPEELPAIISTWQELRQLRAQIQSLEEEKGAVAEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + S V L+ ++++L +L E ++ +PN + Sbjct: 118 RALLVNQDNSQVQQNPHYQRLRARGREIRKELALLYPREAQLEERFYLRALRLPNRTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L H +G + R + +SG R L G A Sbjct: 178 VPVGDESQARVLHV------VGDKPGGPHPTLGAGAPGVRAWRLSHVSGHRSYYLRGAGA 231 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F ++ G+T ++ P L+R G G P + + Sbjct: 232 LLQHGLVNFTLN-KLVRRGFTPMTVPDLLRGAVFEGCGMTPNASPSQIYNIDPSRFEDLS 290 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ G+ R H F K E+ Sbjct: 291 LAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETDT-GKEPWGLYRVHHFTKVEMF 349 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 350 GVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 409 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +FQSRR++ ++ + L+F HT+N + AV R LIA+LE+ DG Sbjct: 410 RFGEVTSASNCTDFQSRRLHIMFQTEEAGELRFAHTVNATACAVPRVLIALLESNQQEDG 469 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P L+PY+ + H+ Sbjct: 470 SVLVPPALQPYLGTDRITAPTHV 492 >gi|225709734|gb|ACO10713.1| Seryl-tRNA synthetase, cytoplasmic [Caligus rogercresseyi] Length = 503 Score = 279 bits (713), Expect = 7e-73, Method: Composition-based stats. Identities = 119/462 (25%), Positives = 208/462 (45%), Gaps = 49/462 (10%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R +PE + K R + + +L LDE R + + ++ +N S Sbjct: 3 LDIDAFRTEKGGDPEKIRKNQKLRFSDESSVDKVLELDEGWRKVRHEADNWNKLKNMASK 62 Query: 57 QIGQAIAEG--------------------NLSLVDAL----KNETSTLKEQ-LPILEKEE 91 IG+ + + N +DAL + L ++ + + Sbjct: 63 VIGEKMKKKEPVGDDDSLPSEVTSGLLDLNKEKLDALTVTQIKKIRLLIDEAIVKNNESL 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 + + + N VP+ +++ + S+ H ++ +G M Sbjct: 123 LSLAKKRDDTLKELSNWLHPSVPVSNDEDKDNRVEKTFGDVSSRKK-YSHVDLIHMIGGM 181 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +R T SG R L G L++AL Q + S+ G++ + P +R E M Q Sbjct: 182 DAERGTVTSGGRGYYLIGPAVFLQQALIQLALQT-LSKKGFSPLYTPFFMRKEVMMEVAQ 240 Query: 212 IPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + +F ++++ + ++LI TSE + + E + KSLP+++ ++ Sbjct: 241 LSQFDEELYKVTGKGSENEEDKSIEEKYLIATSEQPIAAFHREEWMNEKSLPVKYAGIST 300 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHY 317 FR E GS GRDTRG+ R HQF K E IT S+ + M+ AE+ + L + Y Sbjct: 301 CFRQEVGSHGRDTRGIFRVHQFEKVEQFVITSPHDNKSWEAFDEMIGNAEKFYQVLGIPY 360 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKS 375 R+V + +G L +A K DLE W AG +RE+ SCS C ++Q+RR+ RY +++ Sbjct: 361 RLVCIVSGALNNAAAKKIDLEAWFAGGGAFRELVSCSNCLDYQARRLRVRYGQTKKMNQA 420 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 ++ H LNG+ AV R + A++E + S+ +P ++ +M Sbjct: 421 TEYCHMLNGTMCAVTRVICALMETHQTET-SIKVPEAIKAWM 461 >gi|119577248|gb|EAW56844.1| seryl-tRNA synthetase 2, isoform CRA_a [Homo sapiens] Length = 520 Score = 279 bits (713), Expect = 7e-73, Method: Composition-based stats. Identities = 125/445 (28%), Positives = 203/445 (45%), Gaps = 22/445 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDIERFCACPEEAAHALELRKGELRSADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +A + V L+ ++++L L E ++ +PN + Sbjct: 118 RALLANQDSGEVQQDPKYQGLRARGREIRKELVHLYPREAQLEEQFYLQALKLPNQTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L VG KP R H EIGE L ++ R + +SG R L G A Sbjct: 178 VPVGDESQARVLHM-VGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F + G+T ++ P L+R G G P Sbjct: 237 LLQHGLVNFTFNKLL-RRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK--CE 285 L T+EV L + + + LP+R + +R+E + G++ RG+ R H F K E Sbjct: 296 LAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCYRAETNT-GQEPRGLYRVHHFTKAGVE 354 Query: 286 LVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAG 343 + +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G Sbjct: 355 MFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPG 414 Query: 344 QNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 + + E++S S C +FQSRR++ ++ + L+F HT+N + AV R LIA+LE+ Sbjct: 415 RGRFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATACAVPRLLIALLESNQQK 473 Query: 404 DGSVTIPTVLRPYMNNLAVIKKEHI 428 DGSV +P L+ Y+ + H+ Sbjct: 474 DGSVLVPPALQSYLGTDRITAPTHV 498 >gi|126632659|emb|CAM56656.1| seryl-tRNA synthetase 2 [Danio rerio] gi|260763744|dbj|BAI44435.1| seryl-tRNA synthetase 2 [Danio rerio] Length = 510 Score = 279 bits (713), Expect = 7e-73, Method: Composition-based stats. Identities = 122/441 (27%), Positives = 218/441 (49%), Gaps = 22/441 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD++ + + E L L+ R + I+S+ + + + ++I + R+ S+ + Sbjct: 58 LDMKRVCEEAEALTAELEDRRGDLRPADVPLIISVWKNLQKVQEEISHLEGRKQVVSSTV 117 Query: 59 GQAIAEGNLSLVDAL------KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + + + S + +L + E ++E+L L +E E+ +PN Sbjct: 118 RELVGKHDKSTLSSLEEYGHAREEGRAIREKLNQLYLQEKELEKEHYCRALRLPNRTHPS 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VPIG + ++ VG+K + H +IGE+L ++ R + +SG R L G A Sbjct: 178 VPIGDESQARVVEV-VGEKREFDFKPKGHLQIGESLDIIRQRRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ AL F +DL + G+ + P +++ G G P + + Sbjct: 237 QLQFALQNFAMDL-LQKRGFIPMVVPDILKSVVFEGCGMQPHAQKSQVYSLNPKRSPDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T EV + + + K LP+R + +R+E + GR+T G+ R H F K E+ Sbjct: 296 LAGTGEVGVAGYFMDHAVNFKDLPVRTVCSSTCYRAETDT-GRETWGLYRVHHFTKIEMF 354 Query: 288 SITREE---DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 ++ E +S ++ ++ +EI L LHYRV+ + T +LG A + +D+E W+ G+ Sbjct: 355 GVSANETGEESSQLLDQFVTLQKEIFSSLQLHYRVLDMPTQELGPPAYRKFDIEAWMPGR 414 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 + EISS S C ++QSRR++ RY + K L++ HT+N + A+ R +IAILE Y Sbjct: 415 GSFGEISSASNCTDYQSRRLDIRYEGEDGK-LQYAHTVNATACAIPRTIIAILETYQTKK 473 Query: 405 GSVTIPTVLRPYMNNLAVIKK 425 G+V +P VL+ Y+ + VI+K Sbjct: 474 GTVQVPEVLQQYI-GMEVIEK 493 >gi|197101139|ref|NP_001125074.1| seryl-tRNA synthetase, mitochondrial [Pongo abelii] gi|55726880|emb|CAH90199.1| hypothetical protein [Pongo abelii] Length = 518 Score = 279 bits (713), Expect = 8e-73, Method: Composition-based stats. Identities = 123/443 (27%), Positives = 201/443 (45%), Gaps = 20/443 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDIERFSACPEEAAHALELRKGELRSADLPAIISTWQELRQLREQIRSLEEEKAAVTEGV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +A + V L+ ++++L L E ++ +PN + Sbjct: 118 RALLANQDSGEVQQDPKYQGLRARGREIRKELVHLYPREAQLEEQFYLQALKLPNQTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L VG KP R H EIGE L ++ R + +SG R L G A Sbjct: 178 VPVGDESQARVLHV-VGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F + G+T ++ P L+R G G P Sbjct: 237 LLQHGLVNFTFNKLLH-RGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ G+ R H F K E+ Sbjct: 296 LAGTAEVGLAGYFMDHAVAFRDLPVRMVCSSTCYRAETNT-GQEPWGLYRVHHFTKVEMF 354 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG + +D+E W+ G+ Sbjct: 355 GVTGPGLEQSSQLLEEFLSLQTEILTELGLHFRVLDMPTQELGLPTYRKFDIEAWMPGRG 414 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +FQSRR++ ++ + L+F HT+N + A R LIA+LE+ DG Sbjct: 415 HFGEVTSASNCTDFQSRRLHIMFQTETGE-LQFAHTVNATACAAPRLLIALLESNQQKDG 473 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P L+PY+ + H+ Sbjct: 474 SVLVPPALQPYLGTDRITAPTHV 496 >gi|119576772|gb|EAW56368.1| seryl-tRNA synthetase, isoform CRA_d [Homo sapiens] Length = 539 Score = 278 bits (712), Expect = 1e-72, Method: Composition-based stats. Identities = 120/495 (24%), Positives = 210/495 (42%), Gaps = 75/495 (15%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK---- 374 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKR 420 Query: 375 -----------------------SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 ++F H LN + A R + AILENY G +T+P Sbjct: 421 KNNLHLSTQNKLEASLFSPKKVWVVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPE 479 Query: 412 VLRPYM--NNLAVIK 424 L+ +M +I Sbjct: 480 KLKEFMPPGLQELIP 494 >gi|114558175|ref|XP_001148764.1| PREDICTED: similar to seryl-tRNA synthetase isoform 8 [Pan troglodytes] Length = 539 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 120/495 (24%), Positives = 210/495 (42%), Gaps = 75/495 (15%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK---- 374 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKR 420 Query: 375 -----------------------SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 ++F H LN + A R + AILENY G +T+P Sbjct: 421 KNNLHLSTQNKLEASLFSPKKVWVVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPE 479 Query: 412 VLRPYM--NNLAVIK 424 L+ +M +I Sbjct: 480 KLKEFMPPGLQELIP 494 >gi|46117084|ref|XP_384560.1| hypothetical protein FG04384.1 [Gibberella zeae PH-1] Length = 502 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 133/451 (29%), Positives = 219/451 (48%), Gaps = 33/451 (7%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IRQ+ E +R+ Q++ IL L + + L ++ +R R N Q+ Sbjct: 43 DIKHIRQHAELYQQTCVERNYRKQAQNPAKILELHARWQDLQRQGRALRERSNLLRRQLA 102 Query: 60 Q-AIAEGNLSLVD-------ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 A + G+ L + +++E LK+ L +EK E + + +++L +PN+ Sbjct: 103 NPATSSGDEDLKEVRQLTREQIQDEARQLKQDLSAIEKGESQSVTQMEELALELPNLTHP 162 Query: 112 EVPIGTSANENILIRSVGKKPS--AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 + P G+ I + R H IG LGL DF A SG + L G Sbjct: 163 DTPKGSEFEVMSYINDPPIFKESPEDKIWRSHVHIGSELGLFDFAGAATASGWGWYYLLG 222 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-------------A 216 A LE+AL QF + T HG+T+VS P +V G P+ A Sbjct: 223 EAAQLEQALIQFALATAT-RHGWTQVSPPSMVYSHIGAACGFQPRDVSGEQQVYTIAQSA 281 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 +D L TSE++L + ++ I+ + LPL+ ++ +R+EAG+ G DT+G+ Sbjct: 282 EDAERGVPEMCLTGTSEIALAGMKANTTIDPEDLPLKRVAVSRCYRAEAGARGADTKGLY 341 Query: 277 RQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 R H+F K E+ + T + + + ML EIL L LH R++S+ + DLG SA + Sbjct: 342 RVHEFTKVEMFAWTAPDQDAAQDIFDEMLDMQTEILSSLGLHCRILSMPSHDLGASATRK 401 Query: 335 YDLEVWLAG-QNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 D+E + ++ + E++S S C ++Q+RR+ +R R L F T NG+ +AV R + Sbjct: 402 IDMEAFFPSRRDNWGEVTSASMCTDYQTRRLGTRTRV--DGKLAFPWTANGTALAVPRVI 459 Query: 394 IAILENYLNAD-GSVTIPTVLRPYMNNLAVI 423 A+LEN + + +V +P LRP+M+ I Sbjct: 460 AALLENGWDEEAKTVAVPECLRPWMDGKDKI 490 >gi|302662561|ref|XP_003022933.1| hypothetical protein TRV_02920 [Trichophyton verrucosum HKI 0517] gi|291186906|gb|EFE42315.1| hypothetical protein TRV_02920 [Trichophyton verrucosum HKI 0517] Length = 528 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 136/482 (28%), Positives = 217/482 (45%), Gaps = 62/482 (12%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ IR+N E R+ +P ++ I SL ++ L ++ RAR +IG Sbjct: 46 NVRHIRENAELYSKNCFDRNYKPVADYPPRIQSLAKEASDLQHALKHPRARIKQVEKEIG 105 Query: 60 QA--------IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + +DAL+ E LK+ + E +++L +PN+ + Sbjct: 106 KLATIAARQQLGPEQNGTLDALRQEAKELKDASQQMMDRREECMEEIQQLALSLPNLTSK 165 Query: 112 EVPIGTSANENILIRSVGKKP--------SAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 + PIG I + P S + R H IG LGL+DF + +G Sbjct: 166 DTPIGDIPRIVTYINFDPESPPSYASPTSSTAAIPRSHVSIGTELGLLDFTSSATSTGWG 225 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 + LT LE AL Q+ + + G+ VS P +V G P+ A++ Sbjct: 226 WYFLTNEGCLLEHALVQYALTT-ARKKGWKPVSPPSIVYSHIAEACGFQPRDANNEQQIW 284 Query: 224 -------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 R L T+E+ L +Y+ + I ++ LPL+F + +R+EAG+ G Sbjct: 285 SIQQTERDKAAHKPQRSLTGTAEIPLAAMYAGQEIRAEQLPLKFVGASRCYRAEAGARGV 344 Query: 271 DTRGMLRQHQFWKCELVSITRE------------EDSFTEHERMLSCAEEILKRLDLHYR 318 DT+G+ R H+F K EL T S T E MLS +IL L+L R Sbjct: 345 DTKGLYRVHEFTKVELFGWTDNVEQDSTDANTNGITSTTLFEEMLSIQTDILSSLNLPCR 404 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQ---------------NLYREISSCSTCGNFQSRR 363 V+ + + DLG SA + D+EV + + + E++S S C ++QSRR Sbjct: 405 VLEMSSSDLGASATRKRDIEVLFPSRIPNKSDNSSVLDPGYSGWGEVTSTSICTDYQSRR 464 Query: 364 MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAV 422 + +R RD + +F HT+NG+ +AV R L AILE+ + G V +P LRP+M L V Sbjct: 465 LGTRVRDSSG-VSRFPHTVNGTAMAVPRVLAAILEHGWDETLGGVVVPEALRPWMGGLEV 523 Query: 423 IK 424 I+ Sbjct: 524 IR 525 >gi|73948382|ref|XP_541632.2| PREDICTED: similar to Seryl-tRNA synthetase, mitochondrial precursor (Serine--tRNA ligase) (SerRSmt) [Canis familiaris] Length = 518 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 123/443 (27%), Positives = 206/443 (46%), Gaps = 20/443 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD++ + PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDMERLCACPEEAARALQLRKGELRPEDLPAIISTWQELRQLQEQIRSLEEEKGTVAEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + S V L+ +++QL +L +E ++ +PN + Sbjct: 118 RALLVNQDNSQVQQDPQYQSLRAHGREIRKQLTVLYPKETQLKEQFYLQALKLPNRTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP G + +L VG KP EI E L ++ R + +SG R L G A Sbjct: 178 VPTGDESQARVLHV-VGDKPVPSLPPSGPLEIAEKLDILRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F ++ G+T ++ P L+R G G P + Sbjct: 237 LLQHGLVNFTLN-KLIHRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ RG+ R H F K E+ Sbjct: 296 LAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETDT-GKEPRGLYRVHHFTKVEMF 354 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S + LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 355 GVTGPGLEQSSQLLDEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 414 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +FQSRR++ ++ + L+F HT+N + AV R LIA+LE+ DG Sbjct: 415 RFGEVTSASNCTDFQSRRLHIMFQKEAGE-LQFAHTVNATACAVPRLLIALLESNQQEDG 473 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P VL+PY+ + H+ Sbjct: 474 SVLVPPVLQPYLGTDRITVPTHV 496 >gi|317472400|ref|ZP_07931725.1| seryl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|316900120|gb|EFV22109.1| seryl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 321 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 110/324 (33%), Positives = 165/324 (50%), Gaps = 4/324 (1%) Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG 161 + IPN+ VPIG +EN+ I G+ H EI E +D D A K++G Sbjct: 1 MMTIPNIIDPSVPIGKDDSENVEIEKFGEPIVPDFEIPYHTEIMENFSGIDLDSARKVAG 60 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 F L G +A L A+ + D G+T P ++R + G + M+ Sbjct: 61 QGFYYLMGDIARLHSAVISYARDFMI-NRGFTYCVPPFMIRSNVVTGVMSFDEMDAMMYK 119 Query: 222 TT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 + +LI TSE S+ + +I+ + LP T+ +P FR E G+ G + RG+ R HQ Sbjct: 120 IEGEDLYLIGTSEHSMIGKFIDTMIQEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQ 179 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E++ + + E+S +E++ ++ + LD+ R + C+GDL K+ D+E W Sbjct: 180 FEKQEMIVVCKPEESMDWYEKLWKNTVDLFRSLDIPVRTLECCSGDLADLKVKSVDVEAW 239 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 Q Y E+ SCS G+ Q+RR+ R + K + HTLN + VA R LIA LEN Sbjct: 240 SPRQKKYFEVGSCSNLGDAQARRLKIRVNGEDGK--YYAHTLNNTVVAPPRMLIAFLENN 297 Query: 401 LNADGSVTIPTVLRPYMNNLAVIK 424 L ADGSV IP L+PYM + VI+ Sbjct: 298 LQADGSVKIPEALQPYMGGMNVIQ 321 >gi|327308186|ref|XP_003238784.1| seryl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326459040|gb|EGD84493.1| seryl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 528 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 134/482 (27%), Positives = 218/482 (45%), Gaps = 62/482 (12%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ IR+N E R+ +P ++ I SL ++ L ++ RAR +IG Sbjct: 46 NVRHIRENAELYSKNCLDRNYKPVADYPPRIQSLAKEASDLQHALKHPRARIKQVEKEIG 105 Query: 60 QA--------IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + +DAL+ E LK+ + E +++L +PN+ + Sbjct: 106 KLATLAGRQQLEPEQKGDLDALRQEAKELKDASQQMMDRREECMEEIQQLALSLPNLTSK 165 Query: 112 EVPIGTSANENILIRSVGKKP--------SAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 + P+G I + P S + R H IG LGL+DF + +G Sbjct: 166 DTPVGDIPRIVTYINFDPESPLSYASPTSSTAAIPRSHVSIGTELGLLDFTSSATSTGWG 225 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 + LT LE AL Q+ + + G+ VS P +V G P+ A++ Sbjct: 226 WYFLTNEGCLLEHALVQYALTT-ARKKGWKPVSPPSVVYSHIAEACGFQPRDANNEQQIW 284 Query: 224 -------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 R L T+E+ L +Y+ + I ++ LPL+F + +R+EAG+ G Sbjct: 285 SIQQTERDKAAHKPQRSLTGTAEIPLAAMYAGQEIRAEQLPLKFVGASRCYRAEAGARGV 344 Query: 271 DTRGMLRQHQFWKCELVSITREED------------SFTEHERMLSCAEEILKRLDLHYR 318 DT+G+ R H+F K EL + S + E MLS +IL L+L R Sbjct: 345 DTKGLYRVHEFTKVELFGWADNIEQDGTGANTNGITSTSLFEEMLSIQTDILSSLNLPCR 404 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQ---------------NLYREISSCSTCGNFQSRR 363 V+ + + DLG SA + D+EV + + + E++S S C ++QSRR Sbjct: 405 VLEMSSSDLGASAIRKRDIEVLFPSRIPNKSDSSSVLDPGYSGWGEVTSTSICTDYQSRR 464 Query: 364 MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAV 422 + +R RD + +F HT+NG+ +AV R L AILE+ + G V +P VLRP+M L V Sbjct: 465 LGTRVRDGSG-VSRFPHTVNGTAMAVPRVLAAILEHGWDEALGGVVVPEVLRPWMGGLEV 523 Query: 423 IK 424 I+ Sbjct: 524 IR 525 >gi|156086478|ref|XP_001610648.1| seryl-tRNA synthetase [Babesia bovis T2Bo] gi|154797901|gb|EDO07080.1| seryl-tRNA synthetase, putative [Babesia bovis] Length = 502 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 125/494 (25%), Positives = 210/494 (42%), Gaps = 73/494 (14%) Query: 2 LDIQWIRQN--PEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI++ R + + L + +R + + +++ DE+ + E + N S +I Sbjct: 3 LDIKYFRNSNLLQLLRASESRRCVANSMVDSVIAADEEWKRANHAYEQAKRHYNEISKKI 62 Query: 59 GQAIAEG------------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 G ++ L++ LK E + K +L L + + + + L+ + Sbjct: 63 GMVVSNKIPAVDADGNSIEKSVLIEQLKGEAESHKSELADLLNKANALSKNRDVLLRSVG 122 Query: 107 NVPLEEVPIGTSANENILIRSVGKKPSAI-----------------------------HL 137 N+ E+ +EN ++ Sbjct: 123 NIVSEDTVASKDEDENAVVSHWEPSKYGWEDYIQSRDIKEYSTTETKTVGEHGIRLPPWP 182 Query: 138 SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 H ++ L ++ + +++G R L G L A+ Q+ ID T GY V Sbjct: 183 VLSHCDVMLNLNGVNLKKGIEVAGHRGYYLRGQCCLLNLAIIQYGIDFLT-RRGYDAVMP 241 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTTD---------------------------GRWLIP 230 P ++ + M ++ F + ++C +LI Sbjct: 242 PYFMKKDIMRECAELGDFEETLYCIPPLRHNESSASNDNNHPSTELKDEDYEREKLYLIA 301 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 TSE + L+ +E K LPL++ L+ FR EAG+ GRD RG+ R HQF K E + Sbjct: 302 TSEQPIAALHRNETYSIKELPLKYAGLSTCFRREAGAHGRDLRGIFRIHQFQKVEQFVVC 361 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 EDS+ H+ M++ ++E + L+L YRVVS+ G L +A K YDLE + YRE+ Sbjct: 362 GAEDSWKHHDEMINISKEFYQSLNLPYRVVSIVAGALNNAAAKKYDLEAYFPEMAAYREL 421 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SCS C ++QS +N++Y + ++ + H LNG+ VA R L ILENY G + +P Sbjct: 422 VSCSNCTDYQSCDLNTKYFEKDTSQRQLCHMLNGTLVASQRTLCCILENYQTPHGLI-VP 480 Query: 411 TVLRPYMNNLAVIK 424 VL PYM + I Sbjct: 481 KVLVPYMGGVEFIP 494 >gi|61555698|gb|AAX46747.1| seryl-tRNA synthetase 2 [Bos taurus] Length = 518 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 125/443 (28%), Positives = 207/443 (46%), Gaps = 20/443 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD++ + PE AL R E I+S ++ R L ++I + + + + + Sbjct: 58 LDMESLCAYPEDAARALDLRKGELRSKDLPGIISTWQELRQLREQIRSLEEEKEAVTEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + S V L+ +++QL +L +E ++ +PN + Sbjct: 118 RALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L VG KP+ R H EI E L ++ R + +SG R L G A Sbjct: 178 VPVGDESQARVLHV-VGDKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F ++ G+T ++ P L+R G G P + Sbjct: 237 LLQHGLVNFTLN-KLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ G+ R H F K E+ Sbjct: 296 LAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETDT-GKEPWGLYRVHHFTKVEMF 354 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 355 GVTGPGLEQSSELLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 414 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +F SRR++ + + L+F HT+N +G AV R LIA+LE+Y DG Sbjct: 415 RFGEVTSASNCTDFXSRRLHIMFHTEAGE-LQFAHTVNATGCAVPRLLIALLESYQQKDG 473 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P L+PY+ + H+ Sbjct: 474 SVLVPPALQPYLGTDRITTPTHV 496 >gi|116199279|ref|XP_001225451.1| hypothetical protein CHGG_07795 [Chaetomium globosum CBS 148.51] gi|88179074|gb|EAQ86542.1| hypothetical protein CHGG_07795 [Chaetomium globosum CBS 148.51] Length = 608 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 108/416 (25%), Positives = 180/416 (43%), Gaps = 44/416 (10%) Query: 10 NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 NPE + + +KRH + + ++++ E +R R N QIG Sbjct: 201 NPEKIRESQRKRHAPVEVVDEVIAMWEDHRRTAYDATQCNGRINGVQKQIGPKKK----- 255 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 L N L+++ L E L+ + I N+ + VP+ Sbjct: 256 -GMRLSNRPPDLEKEKKELLASAAEKEKLLRIKVKTIGNLVHDSVPVSK----------- 303 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 E+ + L D +R K+ G R + RA+ + ++ Sbjct: 304 ---TENWADEGLDHEVLDKLDGYDPERGVKVVGHRGTF---------RAIINYGLEF-LH 350 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR---WLIPTSEVSLTNLYSHEII 245 + Y + P L+ + M T Q+ +F ++++ T + +LI TSE ++ +S E + Sbjct: 351 DREYVPLQTPQLMLRDQMAKTAQLSQFDEELYKVTGDQADKYLIATSEQPISAYHSDEWL 410 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + K LPL++ + FR EAG+ G+D G+ R H+F K E IT E S+ E M+S Sbjct: 411 QPKELPLKYAGYSTCFRKEAGAHGKDVWGIFRVHEFTKVEQFCITDPEKSWEMFENMIST 470 Query: 306 AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMN 365 +E+ K L + + + +A K DLE W Q ++E+ SCS C ++QSR + Sbjct: 471 SEDFYKSLGIPHHLPD-------NAAAKKLDLEAWFPHQGEFKELVSCSNCTDYQSRDLE 523 Query: 366 SRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 R+ + + H LN + A R + AILEN+ DG V IP LR Y+ Sbjct: 524 IRFGIKKQTDAKKIYVHCLNSTLTATTRTICAILENFQTEDG-VNIPEPLRKYLPG 578 >gi|240277340|gb|EER40849.1| seryl-tRNA synthetase [Ajellomyces capsulatus H143] Length = 463 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 118/450 (26%), Positives = 191/450 (42%), Gaps = 60/450 (13%) Query: 1 MLDI---------QWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRAR 50 MLDI + I +N E L ++R + + I++L + R Sbjct: 1 MLDIADFVHGATPEKITENQERLKENQRRRGAPVEAIDEIIALFKVARE----------- 49 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 L E + L++Q + E + ++ I N Sbjct: 50 -----------------EDAADLIAEKTELEKQKKDADAAATEKELLRDRKLASIGNYVH 92 Query: 111 EEVPIGTSANENILIRSV---GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 E+VP +N ++ + K H ++ L D R TK+ G R L Sbjct: 93 EDVPTSQDEADNAILSTWAPEWFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGHRGYCL 152 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-- 225 + L AL + ++ YT P + + M T Q+ +F ++++ T+ Sbjct: 153 VNYGLLLNLALVNYGLEF-LFGKKYTLNQPPYFMLKQFMAKTAQLEQFDEELYKVTENED 211 Query: 226 ----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 R+LI TSE L+ L+S E ++ LP+++ + +R EAGS G++ G+ R HQF Sbjct: 212 KASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGKEVMGIFRVHQF 271 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E +T+ EDS+ + M+ +EE + L L YRVV + +G L +A + DLE W Sbjct: 272 EKIEQFVMTKPEDSWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWF 331 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDP-----------NSKSLKFTHTLNGSGVAVG 390 Q Y+E+ SCS C ++Q+R + RYR + + H LN + A Sbjct: 332 PSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGTDENKKIYVHALNATLCATE 391 Query: 391 RCLIAILENYLNADGSVTIPTVLRPYMNNL 420 R L ILENY G + +P VLR Y+ Sbjct: 392 RTLCCILENYQTETG-IIVPEVLRKYIPGQ 420 >gi|313226936|emb|CBY22081.1| unnamed protein product [Oikopleura dioica] Length = 498 Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats. Identities = 121/467 (25%), Positives = 211/467 (45%), Gaps = 54/467 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NP+ + + R + + I+ +D + R +E + +N S Sbjct: 3 LDISSFRAEEGGNPDTMRKLQQDRFKNVEVVQKIVDIDNQWRKEQFVLERTKFVKNLCSK 62 Query: 57 QIGQAIA----EGNLSLVDA--------------------------LKNETSTLKEQLPI 86 IG+ + +G+ + ++ +K + + +P Sbjct: 63 TIGKKMKAKEPKGDTADLEEGLSALTLMDKENKGAEEVINGLTVTQIKGLVEQIAKLIPE 122 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 + + + + + N+ +VPI + + I + + A H ++ + Sbjct: 123 TQAKSETLLKERNSALGAVGNLLGPDVPISNDEDADNAIVRLVGEVEARKK-YSHVDLVQ 181 Query: 147 ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAM 206 + +D +R + ++G+R L G L LE+A+ Q H E Y + P +R E M Sbjct: 182 MIDGVDLERGSAIAGSRGYFLKGPLVFLEQAIIQL-AQKHLLEGNYEMLQTPFFMRKEMM 240 Query: 207 YGTGQIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 Q+ +F D+++ ++LI TSE + + E ++ +SLP+++ Sbjct: 241 QKVAQLSQFDDELYKVVGKGSENPEDKSVSEQYLIATSEQPIAAFHYDEGLKPESLPIKY 300 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKR 312 L+ FR E GS GRDT G+ R QF K E + S+ E E+M++ AE + K Sbjct: 301 AGLSYCFRQEVGSHGRDTTGIFRVKQFQKVEQFTFCSPHDNTSWDELEKMITMAENLYKE 360 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 + + YR+V++C+G L +A K YDLE W G +RE+ SCS C ++Q+R +N R+ + Sbjct: 361 IGIGYRIVNICSGALNLAAAKKYDLEAWFPGSGAFRELVSCSNCLDYQARNLNIRFGETK 420 Query: 373 --SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +K + H LN + A R + AILE DG V +P LRPYM Sbjct: 421 QVNKKQDYVHMLNATMCATTRVMCAILETNQEQDG-VVVPEALRPYM 466 >gi|61553733|gb|AAX46450.1| seryl-tRNA synthetase 2 [Bos taurus] Length = 459 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 124/434 (28%), Positives = 203/434 (46%), Gaps = 20/434 (4%) Query: 11 PEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 PE AL R E I+S ++ R L ++I + + + + + + + Sbjct: 8 PEDAARALDLRKGELRSKDLPGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDN 67 Query: 68 SLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 S V L+ +++QL +L +E ++ +PN +VP+G + Sbjct: 68 SQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPDVPVGDESQA 127 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 +L VG KP+ R H EI E L ++ R + +SG R L G A L+ L F Sbjct: 128 RVLHV-VGDKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNF 186 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEVSL 236 ++ G+T ++ P L+R G G P + L T+EV L Sbjct: 187 TLN-KLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGL 245 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--ED 294 + + + LP+R +R+E + G++ G+ R H F K E+ +T E Sbjct: 246 AGYFMDHSVAFRDLPIRMVCSXTCYRAETDT-GKEPWGLYRVHHFTKVEMFGVTGPGLEQ 304 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ + E++S S Sbjct: 305 SSELLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSAS 364 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 C +FQSRR++ ++ + L+F HT+N +G AV R LIA+LE+Y DGSV +P L+ Sbjct: 365 NCTDFQSRRLHIMFQTEAGE-LQFAHTVNATGCAVPRLLIALLESYQQKDGSVLVPPALQ 423 Query: 415 PYMNNLAVIKKEHI 428 PY+ + H+ Sbjct: 424 PYLGTDRITTPTHV 437 >gi|321311056|ref|YP_004193385.1| seryl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1] gi|319802900|emb|CBY93546.1| seryl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1] Length = 404 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 142/420 (33%), Positives = 219/420 (52%), Gaps = 21/420 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M + + E + LK R ++ + E + E+ + +I D+ +RNS + Sbjct: 1 MYSYKDLTTRYEEIKERLKLRGIDERELELARNACEELHRIENQIIDLNTKRNSLVKE-- 58 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N L+ LK E S L E+ IL+++ + L +P + Sbjct: 59 --NSPENRELIKNLKAEISELTEKKQILKEKSDLLLFK------------LPNLPDASLK 104 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + S G K H E+ + D +SG+ + V TG A + RAL Sbjct: 105 EHEEEVFSWGTKKEYSFTPLSHSELAKRNRFFDLVSGADISGSGYVVYTGEGARIFRALI 164 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 + +D + GY+E P+LV + + GT Q+PKF +D+F +D ++L PTSE L NL Sbjct: 165 RLTLDENA-SKGYSERYLPVLVNSDCLLGTAQLPKFEEDLFKVSDDKYLSPTSETQLVNL 223 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y + I+E+ LP++ T FR EAGSAG DT G++R HQF K E+V + E+S+ Sbjct: 224 YRNRIVEASELPIKLTANTNCFRREAGSAGVDTAGVIRLHQFNKTEIVVFCKPEESYEWL 283 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + M+ A IL++L+L YRV+ L D+ F++ KTYD+EVWL ++ YREISS S +F Sbjct: 284 QVMVKDACSILEKLNLPYRVLQLAQNDISFASAKTYDIEVWLPSESRYREISSVSNTLDF 343 Query: 360 QSRRMNSRYRDP---NSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 Q++R RY++ + KF H LNGS +A+ R A++ENY DG+V IP +LR Y Sbjct: 344 QAKRAKIRYKNKVLDKDEKSKFPHILNGSSLAIDRLFAALIENYQKEDGTVEIPDILRSY 403 >gi|322707735|gb|EFY99313.1| putative mitochondrial serine--tRNA ligase [Metarhizium anisopliae ARSEF 23] Length = 515 Score = 276 bits (706), Expect = 5e-72, Method: Composition-based stats. Identities = 135/458 (29%), Positives = 225/458 (49%), Gaps = 37/458 (8%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +DI+ IRQNPE ++ +R+ + Q+ IL L + ++L ++ +R R N + Sbjct: 39 IDIKHIRQNPELYELTCLERNYKNQATYPARILELHSEWQVLQRQGRALRERSNLLRKFL 98 Query: 59 GQAIAEGNLSLVDALKN--------ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 V+ ++ E LK +L ++EK E E + ++ L IPN+ Sbjct: 99 ANPATSSGDDDVEDIREMGREQVQDEARKLKGELAVIEKGEAEAVAEMEALALEIPNLTS 158 Query: 111 EEVPIGTSA---NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 + P G A + + + R H +G LGL DF A SG + L Sbjct: 159 PDTPRGDEAVLLSYINDPPTAFDNSPENKVWRSHVHVGSELGLFDFAGAATASGWGWYYL 218 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD---------- 217 G A LE+AL Q+ + + T ++G+T+VS P +V G P+ Sbjct: 219 VGEAAQLEQALVQYALAVAT-KYGWTQVSPPTMVYSHIGAACGFQPRDQHGEQQVYAIAQ 277 Query: 218 ---DMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 D L TSE+SL + ++ ++ + LP++ ++ +R+EAG+ G DT+G Sbjct: 278 SKADADRGVPEMCLAGTSEISLAGMKANTTLDPEDLPMKRVAVSRCYRAEAGARGADTKG 337 Query: 275 MLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 + R H+F K E+ + T +++ E ML EIL+ L L+ RV+S+ T DLG SA Sbjct: 338 LYRVHEFTKVEMFAWTSPGEDEAQDVFEEMLDIQTEILQSLGLYCRVLSMPTADLGASAT 397 Query: 333 KTYDLEVWLAGQNL----YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVA 388 + D+E W + + E++S STC ++Q+RR+ +R R + F T NG+ +A Sbjct: 398 RKVDMEAWFPSRQSINSGWGELTSASTCTDYQTRRLATRTRV--DGKISFPWTCNGTALA 455 Query: 389 VGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKK 425 V R + A+LEN + + G+V IP VLRP+M+ L + + Sbjct: 456 VPRVMAALLENGWDEETGTVAIPEVLRPWMDGLERMGR 493 >gi|296415556|ref|XP_002837452.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633324|emb|CAZ81643.1| unnamed protein product [Tuber melanosporum] Length = 444 Score = 276 bits (706), Expect = 5e-72, Method: Composition-based stats. Identities = 117/433 (27%), Positives = 199/433 (45%), Gaps = 28/433 (6%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ + NPE + A ++R+ + + +++L E+ R+ +++ N+ Sbjct: 1 MLDVLSFIEARGGNPEVIREAQRRRYAPVEAVDEVIALYEEGRVARFNVDNKGREINTTQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG L + + + LE E L + I N+ VP+ Sbjct: 61 KEIGAKKKA--KEDASLLLQQKVKFEAEKKDLEVIAKEKEKQLYAKLGTIGNIVHNSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + N LIRS + H ++ L + +R K+ G R L Sbjct: 119 SNNEDSNELIRSWTPDGVNVEKHDCLSHHDVLARLDGYEAERGVKVVGHRGYFLKQWGVF 178 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWL 228 L +AL + ++ + GYT + P + + M T Q+ +F D+++ + ++L Sbjct: 179 LNQALINYGLEF-LASKGYTPLQTPQFMLKDMMAKTAQLEQFDDELYKVVDGEEKNDKYL 237 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 I TSE ++ L++ E ++ K LP+R+ + +R EAG+ G+D G+ R HQF K E Sbjct: 238 IATSEQPISALHADEWLQQKELPIRYAGFSSCYRREAGAHGKDAWGIFRVHQFEKIEQFV 297 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 IT E S+ + M++ +EE K L++ YRVV++ +G L +A K YDLE W Q Y+ Sbjct: 298 ITDPEKSWEAFDEMINYSEEFYKSLNIPYRVVTIVSGALNNAAAKKYDLEAWFPFQGEYK 357 Query: 349 EISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 E+S R + RY + K+ H LN + A R L ILENY +G Sbjct: 358 ELS----------RNLEIRYGTKAQTDTVKKYVHCLNSTLCATERSLCCILENYQTPEG- 406 Query: 407 VTIPTVLRPYMNN 419 + +P LR Y+ Sbjct: 407 INVPEALRKYIPG 419 >gi|41056063|ref|NP_957473.1| seryl-tRNA synthetase, mitochondrial [Danio rerio] gi|33416907|gb|AAH55610.1| Seryl-tRNA synthetase 2 [Danio rerio] Length = 510 Score = 276 bits (706), Expect = 5e-72, Method: Composition-based stats. Identities = 121/441 (27%), Positives = 219/441 (49%), Gaps = 22/441 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD++ + + E L L+ R + I+S+ + + + ++I + R+ S+ + Sbjct: 58 LDMRRVCEEAEALTAELEDRRGDLRPADVPLIISVWKNLQKVQEEISHLEGRKQVVSSTV 117 Query: 59 GQAIAEGNLSLVDAL------KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + + + S + +L + E ++E+L L +E E+ +PN Sbjct: 118 RELVGKHDKSTLSSLEEYGHAREEGRAIREKLNQLYLQEKELEKEHYCRALRLPNRTHPS 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VPIG + ++ VG+K + H +IGE+L ++ R + +SG R L G A Sbjct: 178 VPIGDESQARVVEV-VGEKREFDFKPKGHLQIGESLDIIRQRRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ AL F +DL + G+ + P +++ G G P + + Sbjct: 237 QLQFALQNFAMDL-LQKRGFIPMVVPDILKSVVFEGCGMQPHAQKSQVYSLNPKRSPDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T +V + + + K LP+R + +R+E + GR+T G+ R H F K E++ Sbjct: 296 LAGTGKVGVAGYFMDHAVNLKDLPVRTVCSSTCYRAETDT-GRETWGLYRVHHFTKIEML 354 Query: 288 SITREE---DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 ++ E +S ++ ++ +EI L LHYRV+ + T +LG A + +D+E W+ G+ Sbjct: 355 GVSANETGEESSQLLDQFVTLQKEIFSSLKLHYRVLDMPTQELGPPAYRKFDIEAWMPGR 414 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 + EISS S C ++QSRR++ RY + K L++ HT+N + A+ R +IAILE Y Sbjct: 415 GSFGEISSASNCTDYQSRRLDIRYEGEDGK-LQYAHTVNATACAIPRTIIAILETYQTKK 473 Query: 405 GSVTIPTVLRPYMNNLAVIKK 425 G+V +P VL+ Y+ + VI+K Sbjct: 474 GTVQVPEVLQQYI-GMEVIEK 493 >gi|289614731|emb|CBI58508.1| unnamed protein product [Sordaria macrospora] Length = 539 Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 128/467 (27%), Positives = 215/467 (46%), Gaps = 44/467 (9%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQI- 58 DI+ IRQNP+ +R+ Q+ + I L + + ++ +R R N Q+ Sbjct: 63 DIKHIRQNPDLYAQNCIERNYHQQATYPQRINDLHAQWQAKQREARSLRERSNILRRQLT 122 Query: 59 -GQAIAEGNLSLV---------DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 +I + N + D L E LK L +E EE + S ++ L IPN+ Sbjct: 123 DPGSIRDENADTIAAGTQLLTRDELIAEARKLKALLSTIEAEETRILSEIESLALSIPNL 182 Query: 109 PLEEVPIGTSAN--ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 +E P G I ++ + R H IG LGL+DF A SG + Sbjct: 183 TSDESPRGPEPQVLSLINEHPEPVPSASDRVWRSHVHIGNELGLLDFASAGTTSGWGWYF 242 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA---------- 216 L A LE+AL + +DL G+ +VS P +V G P+ Sbjct: 243 LLDEAAQLEQALIGYALDLAVRS-GWRQVSPPSIVYSHVASACGFQPRDQNGETQIYSLS 301 Query: 217 ---DDMFCTTDGRWLIPTSEVSLTNLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSA 268 DD + TSE+ L +++++ + S+ PL++ ++ +R+EAGS Sbjct: 302 QSADDAARGKPELSMAGTSEIPLAGMHANKTLLCPGDISEFSPLKYVAVSRCYRAEAGSR 361 Query: 269 GRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 G +T+G+ R H+F K EL T + + ++ ++L L LH RV+ + T D Sbjct: 362 GLETKGLYRVHEFTKVELFGWTYPSLDSASEIFNEIVDLQTDLLSSLGLHCRVLEMPTHD 421 Query: 327 LGFSACKTYDLEVWLAGQ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK--FTH 380 LG SA + D+E + + + E++S S C ++Q+RR+ +R + + K ++ + Sbjct: 422 LGASATRKIDIEAFFPSRRERNEGWGEVTSASICTDYQARRLATRLKGEDGKMIEGGYPF 481 Query: 381 TLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKKE 426 T+NG+ +AV R + A+LEN + + G+V IP VLR +M I + Sbjct: 482 TVNGTAMAVPRVVAALLENGWDEETGTVFIPEVLRGWMGGKERIGPK 528 >gi|72179619|ref|XP_788714.1| PREDICTED: similar to Seryl-tRNA synthetase 2 [Strongylocentrotus purpuratus] gi|115931011|ref|XP_001190538.1| PREDICTED: similar to Seryl-tRNA synthetase 2 [Strongylocentrotus purpuratus] Length = 508 Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats. Identities = 116/433 (26%), Positives = 199/433 (45%), Gaps = 27/433 (6%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D+ ++ QN E + + R + +L ++ +++ + + D++ R Sbjct: 83 IDLDFLAQNAEVIADRISHRKGKIDVHEVLKKMKEFQLIQEDVHDVQLRL---------- 132 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + +D N T L+ L + + + ++ IPN +VP+ A+ Sbjct: 133 -----QTDIDKGLN-TKELESMLKEKKNQLDRAQNDFYRIAVAIPNSIHPDVPLTEDADP 186 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 +LI + +K S + H E+GE L ++ +G R L G + LE AL +F Sbjct: 187 -VLIEEINEKRSFDFPIKGHVELGEDLDIIRLKNLGHTTGHRSYFLKGAGSMLEDALVRF 245 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM------FCTTDGRWLIPTSEVS 235 +D HG+ + P L++ G + WL T+EV Sbjct: 246 TLDRLIKNHGFKIIKVPDLIKPVVFEACGMRTEGLHTQVYPLSPEHHNSDLWLAGTAEVG 305 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE-- 293 + ++ I LPLR ++ +R+E D RG+ R HQF K E+ + E Sbjct: 306 IAGYLMNKTIPMAELPLRIAAVSRCYRAETA-HSADARGLYRVHQFTKVEMFCVAANESG 364 Query: 294 -DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 +S H+ ++ E+ L LH++++ + DLG A + +D E W+ + Y E+SS Sbjct: 365 KESEQIHQELVGIERELFSDLGLHFQILDMPAHDLGAPAYRKFDCEAWMPHRKAYGEVSS 424 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C +FQSRR++ +Y+ K+ HTLNG+ AV R +IAILEN DGS+TIP Sbjct: 425 TSNCTDFQSRRLHIQYKPSPESQAKYAHTLNGTACAVPRLIIAILENNQQRDGSITIPEP 484 Query: 413 LRPYMNNLAVIKK 425 L+PYM+ + I + Sbjct: 485 LQPYMDGMREITR 497 >gi|315054899|ref|XP_003176824.1| seryl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311338670|gb|EFQ97872.1| seryl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 529 Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats. Identities = 133/483 (27%), Positives = 220/483 (45%), Gaps = 63/483 (13%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ IR+N E R+ +P ++ I SL ++ L ++ RAR +I Sbjct: 46 NVRHIRENAEIYSKNCFDRNYKPVADYPPRIQSLAKEASDLQHALKHPRARIKQVEKEIA 105 Query: 60 QAIA--------EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + +DAL+ E LK+ + E +++L +PN+ + Sbjct: 106 KLATIAARQSQEQKQDGALDALRQEAKELKDASQQMMDRREECMEEIQQLALSLPNLTSK 165 Query: 112 EVPIGTSANENILIRSVGKKP--------SAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 + PIG I + P S R H IG LGL+DF + +G Sbjct: 166 DTPIGDIPRIVTYINFDPESPPSYTSPATSTAATPRSHVSIGTELGLLDFTSSATSTGWG 225 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 + LT LE AL Q+ + + G+ VS P +V G P+ A++ Sbjct: 226 WYFLTNEGCLLEHALVQYAL-TAARKKGWKPVSPPSVVYSHIAEACGFQPRDANNEQQIW 284 Query: 224 -------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 R L T+E+ L +Y+ + I+++ LPL+ + +R+EAG+ G Sbjct: 285 SIQQTERDRAAHKPQRSLTGTAEIPLAAMYAGQEIQAEQLPLKLVGASRCYRAEAGARGV 344 Query: 271 DTRGMLRQHQFWKCELVSITREED-------------SFTEHERMLSCAEEILKRLDLHY 317 DT+G+ R H+F K EL + T + S + E MLS +IL L+L Sbjct: 345 DTKGLYRVHEFTKVELFAWTDNIEQGNLTNADSNEITSTSLFEEMLSIQTDILSSLNLPC 404 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQ---------------NLYREISSCSTCGNFQSR 362 R++ + + DLG SA + D+EV + + + E++S S C ++QSR Sbjct: 405 RILEMSSSDLGASATRKRDIEVLFPSRIPNKSDKASVLDPDYSGWGEVTSTSICTDYQSR 464 Query: 363 RMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLA 421 R+ +R RD + +S +F HT+NG+ +AV R L AILE+ + G V +P VLRP+M + Sbjct: 465 RLGTRVRDSSGES-RFPHTVNGTAMAVPRVLAAILEHGWDEAIGGVIVPEVLRPWMGGIE 523 Query: 422 VIK 424 VI+ Sbjct: 524 VIR 526 >gi|296417449|ref|XP_002838370.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634299|emb|CAZ82561.1| unnamed protein product [Tuber melanosporum] Length = 527 Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats. Identities = 130/478 (27%), Positives = 216/478 (45%), Gaps = 54/478 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 + ++ IR+ PE+ R+ ++ I++L + L K + + R+N+ SAQ+ Sbjct: 50 ISVKSIREFPEYHRQNCLNRNYPSLADAPERIIALHGEWIGLQKGLRGDKERQNTLSAQL 109 Query: 59 ---------------GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 +A +L E +K ++ +E+ E + + +K L Sbjct: 110 RSRNPLARGPHGGGDKTEVAAEGQEAKKSLLAEAKDVKAKISEVEERERVLENEMKSLAI 169 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR-EHFEIGEALGLMDFDRATKLSGA 162 +PN +E PIGT I PS R H +IG LGL+DF A +SG Sbjct: 170 QLPNWTHKESPIGTEPKLLGYINPELAPPSQRTGPRISHIQIGAELGLLDFSAAGTVSGW 229 Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA--DDMF 220 + L LE+AL + + + G+ V+ P +V G P+ + Sbjct: 230 GWYYLLNEAVLLEQALVNYALSF-AMKRGWKLVTPPNIVYSHMAAACGFRPRDQHGEQQI 288 Query: 221 CT------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 T L T+E+ L +Y+++ LP++ + ++R+EAG+ G +++G Sbjct: 289 YTLDGAEGKIEHCLAGTAEIPLAGMYANKTFAEDQLPVKLVGVGRAYRAEAGARGAESKG 348 Query: 275 MLRQHQFWKCELVSITREED-----------------SFTEHERMLSCAEEILKRLDLHY 317 + R H+F K EL + S + E ML + I+ L LH Sbjct: 349 LFRVHEFTKVELFAWGPPGQEEFSTPNSEPITATIITSASLFEEMLDLQKSIISSLGLHA 408 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNL---YREISSCSTCGNFQSRRMNSRYR----- 369 R++ + T DLG SA + D+E ++ + + EISS S C ++QSRR+N+R + Sbjct: 409 RILEMPTTDLGASASRKIDIEAYMPSREAKDPWGEISSLSNCTDYQSRRLNTRVKIAKPG 468 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKKE 426 +F TLNG+GVAV R L+AILEN + + G V +P VLR YM L +I ++ Sbjct: 469 AAGGVKSEFPWTLNGTGVAVPRVLMAILENGWSEERGGVVVPEVLRGYMGGLELIGRK 526 >gi|330861493|emb|CBX71709.1| hypothetical protein YEW_JH40560 [Yersinia enterocolitica W22703] Length = 199 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 114/196 (58%), Positives = 141/196 (71%) Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LIPT+EV +TNL EI+E +SLPL+ T P FRSEAGS GRDTRG++R HQF K E+V Sbjct: 3 LIPTAEVPVTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMV 62 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 ITR EDS E + AE++L+ L+L YR + LCTGD+GF + KTYDLEVWL QN Y Sbjct: 63 QITRPEDSMAALEELTGHAEKVLQLLELPYRKMLLCTGDMGFGSSKTYDLEVWLPAQNTY 122 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 REISSCS +FQ+RRM +R R+ + + HTLNGSG+AVGR L+A+LENY ADG + Sbjct: 123 REISSCSNMWDFQARRMQARCRNKTDRKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRI 182 Query: 408 TIPTVLRPYMNNLAVI 423 +P VLRPYM L I Sbjct: 183 QVPEVLRPYMGGLEFI 198 >gi|326478064|gb|EGE02074.1| seryl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 528 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 135/482 (28%), Positives = 218/482 (45%), Gaps = 62/482 (12%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ IR+N E R+ +P ++ I SL ++ L ++ RAR +IG Sbjct: 46 NVRHIRENAELYSKNCFDRNYKPVADYPPRIQSLAKEASDLQHALKHPRARIKQVEKEIG 105 Query: 60 QA--------IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + +D L+ E LK+ + E +++L +PN+ + Sbjct: 106 KLATLAARQQLEPEQKGALDTLRQEAKELKDASQQMMDRSEECMEEIQQLALSLPNLTSK 165 Query: 112 EVPIGTSANENILIRSVGKKP--------SAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 + PIG I + P SA + R H IG LGL+DF + +G Sbjct: 166 DTPIGDIPRIVTYINFDPEAPPSYASPASSATAIPRSHVSIGTELGLLDFTSSATSTGWG 225 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 + LT LE AL Q+ + + G+ VS P +V G P+ A++ Sbjct: 226 WYFLTNEGCLLEHALVQYALAT-ARKKGWKPVSPPSVVYSHIAEACGFQPRDANNEQQIW 284 Query: 224 -------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 R L T+E+ L +Y+ + I+++ LPL+F + +R+EAG+ G Sbjct: 285 SIQQTERDKAAHKPQRSLTGTAEIPLAAMYAGQEIQAEQLPLKFVGASRCYRAEAGARGV 344 Query: 271 DTRGMLRQHQFWKCELVSITRE------------EDSFTEHERMLSCAEEILKRLDLHYR 318 DT+G+ R H+F K EL S + E MLS +IL L+L R Sbjct: 345 DTKGLYRVHEFTKVELFGWADNVEQDGTGANTNGITSTSLFEEMLSIQTDILSSLNLPCR 404 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQ---------------NLYREISSCSTCGNFQSRR 363 V+ + + DLG SA + D+EV + + + E++S S C ++QSRR Sbjct: 405 VLEISSSDLGASATRKRDIEVLFPSRIPNKSDSSSVLDPDYSGWGEVTSTSICTDYQSRR 464 Query: 364 MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAV 422 + +R RD + +F HT+NG+ +AV R L AILE+ + G V +P VLRP+M L V Sbjct: 465 LGTRVRDSSG-VSRFPHTVNGTAMAVPRVLAAILEHGWDEALGGVVVPEVLRPWMGGLEV 523 Query: 423 IK 424 I+ Sbjct: 524 IR 525 >gi|326470776|gb|EGD94785.1| seryl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 528 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 135/482 (28%), Positives = 218/482 (45%), Gaps = 62/482 (12%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ IR+N E R+ +P ++ I SL ++ L ++ RAR +IG Sbjct: 46 NVRHIRENAELYSKNCFDRNYKPVADYPPRIQSLAKEASDLQHALKHPRARIKQVEKEIG 105 Query: 60 QA--------IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + +D L+ E LK+ + E +++L +PN+ + Sbjct: 106 KLATLAARQQLEPEQKGALDTLRQEAKELKDASQQMMDRSEECMEEIQQLALSLPNLTSK 165 Query: 112 EVPIGTSANENILIRSVGKKP--------SAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 + PIG I + P SA + R H IG LGL+DF + +G Sbjct: 166 DTPIGDIPRIVTYINFDPEAPPSYASPASSATAIPRSHVSIGTELGLLDFTSSATSTGWG 225 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 + LT LE AL Q+ + + G+ VS P +V G P+ A++ Sbjct: 226 WYFLTNEGCLLEHALVQYALAT-ARKKGWKPVSPPSVVYSHIAEACGFQPRDANNEQQIW 284 Query: 224 -------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 R L T+E+ L +Y+ + I+++ LPL+F + +R+EAG+ G Sbjct: 285 SIQQTERDKAAHKPQRSLTGTAEIPLAAMYAGQEIQAEQLPLKFVGASRCYRAEAGARGV 344 Query: 271 DTRGMLRQHQFWKCELVSITRE------------EDSFTEHERMLSCAEEILKRLDLHYR 318 DT+G+ R H+F K EL S + E MLS +IL L+L R Sbjct: 345 DTKGLYRVHEFTKVELFGWADNVEQDGTGANTNGITSTSLFEEMLSIQTDILSSLNLPCR 404 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQ---------------NLYREISSCSTCGNFQSRR 363 V+ + + DLG SA + D+EV + + + E++S S C ++QSRR Sbjct: 405 VLEISSSDLGASATRKRDIEVLFPSRIPNKSDSSSVLDPDYSGWGEVTSTSICTDYQSRR 464 Query: 364 MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAV 422 + +R RD + +F HT+NG+ +AV R L AILE+ + G V +P VLRP+M L V Sbjct: 465 LGTRVRDSSG-VSRFPHTVNGTAMAVPRVLAAILEHGWDEALGGVVVPEVLRPWMGGLEV 523 Query: 423 IK 424 I+ Sbjct: 524 IR 525 >gi|296822134|ref|XP_002850235.1| seryl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238837789|gb|EEQ27451.1| seryl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 547 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 129/502 (25%), Positives = 214/502 (42%), Gaps = 81/502 (16%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ IR+N E R+ +P ++ I SL ++ L ++ RAR +I Sbjct: 46 NVRHIRENAELYSQNCIDRNYKPVADYPPRIQSLAKEASDLQHALKHPRARIKQVEKEIA 105 Query: 60 QA----------IAEGNLSL-----------------VDALKNETSTLKEQLPILEKEEH 92 + G ++AL+ E LK+ + Sbjct: 106 KLATLTARQSQHKQTGKQEETGQDGVTLVEEADNNAALEALRLEAKELKDASQQIMDRRE 165 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------REHFEI 144 +++L +PN+ ++ PIG I + P + R H I Sbjct: 166 NCIEEIQQLALSLPNLTSKDTPIGDVPRIVAYINFDPQSPPSYTSPAAHPSSNLRSHVSI 225 Query: 145 GEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDE 204 G LGL+DF + +G + LT LE AL Q+ + + G+ VS P +V Sbjct: 226 GTELGLIDFSSSATSTGWGWYFLTNEGCLLEHALVQYALST-AHKKGWKPVSPPSVVYSH 284 Query: 205 AMYGTGQIPKFADDMFCTT-------------DGRWLIPTSEVSLTNLYSHEIIESKSLP 251 G P+ A++ R L T+E+ L +Y+ + I++ LP Sbjct: 285 IAEACGFQPRDANNEQQIWSIQQTERDRAAHKPQRSLTGTAEIPLAAMYASQEIQAGQLP 344 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE------------H 299 ++ + +R+EAG+ G DT+G+ R H+F K EL + + + Sbjct: 345 IKLVGASRCYRAEAGARGVDTKGLYRVHEFTKVELFAWADNIECNSTSTVSNEITSTTVF 404 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ--------------- 344 E MLS +IL L+L RV+ + + DLG SA + D+EV + Sbjct: 405 EEMLSIQTDILSSLNLPCRVLEMSSSDLGASAARKRDIEVLFPSRIPSDSNNSSVLDPEY 464 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 + + E++S S C ++QSRR+ +R R +S ++ HT+NG+ +AV R L AILE+ + Sbjct: 465 SGWGEVTSTSICTDYQSRRLGTRVRGSGGES-RYPHTVNGTAMAVPRVLAAILEHGWDEK 523 Query: 405 -GSVTIPTVLRPYMNNLAVIKK 425 G V IP VLRP+M + VI K Sbjct: 524 LGGVVIPEVLRPWMGGIEVIAK 545 >gi|300708459|ref|XP_002996408.1| hypothetical protein NCER_100508 [Nosema ceranae BRL01] gi|239605708|gb|EEQ82737.1| hypothetical protein NCER_100508 [Nosema ceranae BRL01] Length = 427 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 120/429 (27%), Positives = 195/429 (45%), Gaps = 12/429 (2%) Query: 1 MLDIQWIR--QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIED---IRARRNSN 54 M+DI +R + E + + KKR E I D+ ++++ + Sbjct: 1 MIDINLLRDPKTRELVIESEKKRFKNTDNIEEIYKKDQLRIKFNFELDNTNKKKNEIKKK 60 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 +QI + + L L + +++ LE E + +KK++ + N+ V Sbjct: 61 ISQIYKENKKEGKELAKDLIEKLKLIEKSCFELEVEVSTLDEEIKKMLKVVGNILDSSVV 120 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 + + +N LIR + K+ G R L+G +A L Sbjct: 121 VSNNERDNKLIRQFRTNRVIQNK---KNYTELMQKYTHSVAGAKIIGHRGYFLSGKIAKL 177 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV 234 AL ++ ID + GYT + P+++R + M T QI F + ++ D +LI TSE Sbjct: 178 GMALSRYAIDF-LEKQGYTFIQTPVMMRKDVMSKTAQIGDFDEQLYKVEDDLYLIATSEQ 236 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 L+ L+ E + LP + + FR EAG+ G+D G+ R HQF K E I + E+ Sbjct: 237 PLSALHMDERMVDSDLPKLYCGQSLCFRKEAGAHGKDNSGIFRVHQFEKIEQFVICKPEE 296 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S +M+ +EE K LD+ Y VVS+ +G+ +A YDLE + + YRE+ SCS Sbjct: 297 SKEYFYKMIGLSEEFYKSLDISYNVVSIVSGEFNDAASIKYDLEAFFPNADKYRELVSCS 356 Query: 355 TCGNFQSRRMNSRYRD-PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 C ++QSR +N RY + + H LN + AV R L ++ENY D + +P VL Sbjct: 357 NCTDYQSRELNVRYGVLKENNKKGYVHMLNSTLCAVQRTLCCVVENYQQDD-KIIVPEVL 415 Query: 414 RPYMNNLAV 422 R Y + Sbjct: 416 RKYTGFDEI 424 >gi|320583697|gb|EFW97910.1| mitochondrial seryl-tRNA synthetase, putative [Pichia angusta DL-1] Length = 460 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 129/428 (30%), Positives = 217/428 (50%), Gaps = 11/428 (2%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 D+++ + +R + + +L K K+ +++ N+ +I + Sbjct: 31 DLEYYSSRVDLFRDICSRRKVPFPLDGYTALYGKYLDARKQAIELKREANTLQQRIKDSK 90 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 A+ + LK L + + + + +++L+ +PN+ + +G+ Sbjct: 91 MGRQPVDEQAVLERLAQLKPLLKRSAETQKGLVTQMEELVDQLPNLIDD--AVGSQQTLL 148 Query: 123 ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFM 182 I +A +H I E GL +F +A+ +SG + L G LA LE+AL Q+ Sbjct: 149 EYINVSHDIDAAADEKYDHKSILENAGLAEFLQASNVSGRGWYYLMGDLALLEQALVQYS 208 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD----MFCTTDGRWLIPTSEVSLTN 238 + ++G+ V P +V+ E G P+ ++ T D L T+E+SL Sbjct: 209 L-KLARKNGFQMVLPPSIVKTEVTNACGFRPRDTNNERQVYELTHDNLCLTGTAEISLAA 267 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF-- 296 L + LP R L+ SFR+EAG+AGRDTRG+ R H+F K EL S T E S Sbjct: 268 LSIDAEYKFGDLPRRMVGLSRSFRAEAGAAGRDTRGLYRVHEFTKVELFSWTTGELSESS 327 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E +R+++ +E + L L RV+ + DLG A K D+EV++ G+ + E+SS S C Sbjct: 328 KEFDRLVAFQKEFINSLGLPARVLLMPADDLGAPAFKKVDIEVFMPGRGAWGEVSSTSNC 387 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG-SVTIPTVLRP 415 ++Q+RR+++RYR N+K L+F HTLNG+ AV R L+AI+EN + D S+ +P VL+P Sbjct: 388 LDYQARRLHARYRTENNK-LRFVHTLNGTACAVPRLLVAIVENNYDPDSHSIAVPKVLQP 446 Query: 416 YMNNLAVI 423 Y+++ I Sbjct: 447 YVDDKKYI 454 >gi|19115378|ref|NP_594466.1| mitochondrial serine-tRNA ligase [Schizosaccharomyces pombe 972h-] gi|74625934|sp|Q9UTB2|SYSM_SCHPO RecName: Full=Seryl-tRNA synthetase, mitochondrial; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|6469293|emb|CAB61772.1| mitochondrial serine-tRNA ligase [Schizosaccharomyces pombe] Length = 454 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 121/444 (27%), Positives = 211/444 (47%), Gaps = 31/444 (6%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRAR---RNSNSAQI 58 L+ ++I QN E + R+L+ +E + + R LI + E ++ S +I Sbjct: 25 LNYKYIYQNAEAVQRNCINRNLQAIAETVPKI----RSLIDEKESLKNEFFPLLSLKKEI 80 Query: 59 G-QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 Q + + L NE LK++ K +V + L + +PN L VP+G Sbjct: 81 TLQIERCSDPNERGKLVNEAKGLKKKTEEYNKIISKVTNDLYQYCLAVPNTTLPTVPVGP 140 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++ + ++H +I ++ + A + SG F TG +A LE A Sbjct: 141 EDKAVVVQKIGSPLVKKTGSLKDHLQIANEG--INLEDAAQASGHSFCYTTGDIALLEMA 198 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-----------TTDGR 226 + + +D G+ V P +VR + G P+ + ++ + Sbjct: 199 ITNYAMDFAI-SKGWCPVIPPTIVRTDIALACGFQPRDEEGQQIYELDSYTSPLVSSPKQ 257 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 LI T+E+SL L + + + + ++ ++R EAG+ G++ RG+ R H+F K EL Sbjct: 258 CLIGTAEISLAALGFKKTFNNFT-ERKVVGVSRAYRREAGARGKENRGLYRLHEFTKVEL 316 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + T S +++ +E ++ L + R++++ T +LG SA + YD+E W+ + Sbjct: 317 FAWTHPSRSSEMFNEIVNFQKEFVETLKIPARILNMPTAELGSSASQKYDIEAWMPARQS 376 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 Y EI+S S C +Q+RR+ +RYR N K F HTLNG+ A+ R +IAILEN+ DG+ Sbjct: 377 YGEITSASNCLEYQARRLLTRYR--NDKDSGFVHTLNGTAAAIPRLIIAILENHQQEDGT 434 Query: 407 VTIPTVLRPYMNNLAVIKKEHILE 430 V +P L PY I KE++ + Sbjct: 435 VKVPETLVPY------IHKEYLFK 452 >gi|149235905|ref|XP_001523830.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146452206|gb|EDK46462.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 515 Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 136/441 (30%), Positives = 230/441 (52%), Gaps = 24/441 (5%) Query: 2 LDIQWIRQNPEHLDIALKKRHL----EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 LDI I E ++++R L + +YI+ L KI ++ RN + + Sbjct: 83 LDISDIILRSEEYKKSVERRQLPDTLKADIDYIVKARPLQGELFSKINALKRERNELANK 142 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + VD +K +T+K ++ LEK+ ++ ++ +PN+ + VP Sbjct: 143 I-----KSKSVKVDDVKLRLTTIKLEMQPLEKQLKDMQETVYTKAEGLPNLLDDGVPENP 197 Query: 118 SANENILIRSVGKKPSAIH------LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 A + + + +A +SR+H I E++GL+DF A+++SG+ + L Sbjct: 198 LAEDIVAYINTNSTEAASFNASSEDMSRDHKSICESMGLVDFATASRISGSSWYYLLKDG 257 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRW 227 A LE+AL Q+ + +HGYT V P +V+ E ++ G P ++ Sbjct: 258 ALLEQALVQYALSR-ARQHGYTMVIPPSIVKSEIVHACGFKPNDQNNEKQVYQIEEEPLS 316 Query: 228 LIPTSEVSLTNLYSHEIIESK-SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 L T+E+ L L+S I LP+++ ++ S+R+EAGS+GRDT+G+ R H+F K EL Sbjct: 317 LTGTAEIPLGALHSSTIFPPHTKLPIKYAGVSRSYRAEAGSSGRDTKGLYRVHEFTKVEL 376 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 T + + +E E + E+++ L L +++++ T DLG A K YD+E W+ G+ Sbjct: 377 FHFTTMDQAKSELEEIKDFQVELVQSLGLKAKLLNMPTSDLGSPALKKYDIEAWMPGRGA 436 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE-NYLNADG 405 + EI+S S CG++QSRR+ R +S K TLNG+ +AV R ++A++E NY Sbjct: 437 WGEITSSSNCGDYQSRRLGIRLNT--GESTKHVATLNGTCMAVPRVIVALIEQNYDPERK 494 Query: 406 SVTIPTVLRPYMNNLAVIKKE 426 + IP VLRPYM++ VI K+ Sbjct: 495 VINIPEVLRPYMDDKKVISKD 515 >gi|313241186|emb|CBY33477.1| unnamed protein product [Oikopleura dioica] Length = 498 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 120/467 (25%), Positives = 207/467 (44%), Gaps = 54/467 (11%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R P+ + R + + I+ +D + R +E + +N S Sbjct: 3 LDISSFRAEEGGSPDTMRKLQHDRFKNVEVVQKIVDIDNQWRKEQFVLERTKFVKNLCSK 62 Query: 57 QIGQAIA----EGNLSLVDA--------------------------LKNETSTLKEQLPI 86 IG+ + +G+ + ++ +K + + +P Sbjct: 63 TIGKKMKAKEPKGDTADLEEGLSALTLMDKENKAAEEVINGLTVTQIKGLVEQIAKLIPE 122 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 + + + + + N+ +VPI + + I + A H ++ + Sbjct: 123 TQAKSETLLKERNSALGAVGNLLGPDVPISNDEDADNAIVRLVGVVEARKK-YSHVDLVQ 181 Query: 147 ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAM 206 + +D +R + ++G+R L G L LE+A+ Q H E Y + P +R E M Sbjct: 182 MIDGVDLERGSAIAGSRGYFLKGPLVFLEQAIIQL-AQKHLLEGNYEMLQTPFFMRKEMM 240 Query: 207 YGTGQIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 Q+ +F D+++ ++LI TSE + + E ++ +SLP+++ Sbjct: 241 QKVAQLSQFDDELYKVVGKGSENPEDKSVSEQYLIATSEQPIAAFHYDEGLKPESLPIKY 300 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKR 312 L+ FR E GS GRDT G+ R QF K E + S+ E E M++ AE + K Sbjct: 301 AGLSYCFRQEVGSHGRDTTGIFRVKQFQKVEQFTFCSPHDNTSWDELENMITMAENLYKE 360 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 + + YR+V++C+G L +A K YDLE W G +RE+ SCS C ++Q+R +N R+ + Sbjct: 361 IGIGYRIVNICSGALNLAAAKKYDLEAWFPGSGAFRELVSCSNCLDYQARNLNIRFGETK 420 Query: 373 --SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +K + H LN + A R + AILE DG V +P LRPYM Sbjct: 421 QVNKKQDYVHMLNATMCATTRVMCAILETNQEQDG-VVVPEALRPYM 466 >gi|190405796|gb|EDV09063.1| hypothetical protein SCRG_04717 [Saccharomyces cerevisiae RM11-1a] gi|207344782|gb|EDZ71806.1| YHR011Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256272950|gb|EEU07915.1| Dia4p [Saccharomyces cerevisiae JAY291] gi|259147039|emb|CAY80294.1| Dia4p [Saccharomyces cerevisiae EC1118] gi|323348339|gb|EGA82587.1| Dia4p [Saccharomyces cerevisiae Lalvin QA23] Length = 446 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 114/435 (26%), Positives = 215/435 (49%), Gaps = 24/435 (5%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYIL---SLDEKNRILIKKIE----DIRARRNSNS 55 D++ I + +++ R L +++ I+ L + IK+I+ DI+ +R S Sbjct: 22 DVKRIIEMIPQYQTSIQNREL-IEADSIIRSLQLLGERYQNIKEIDKVIADIQIQRKSIE 80 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 AQI + + + + LKEQ + E+ + + +PN VP+ Sbjct: 81 AQI-----KKDKTKITEYSAALKALKEQYNDQNSKSSELKKKILETCKSLPNTLDPTVPL 135 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 I K ++ H +I ++D A+ ++G + L A LE Sbjct: 136 DAPQ---IEQWINPLKTHKTSEAQAHVDIMLKKNMLDLQTASNVTGMSWYYLLNDGARLE 192 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPT 231 +AL + + +E+G++ P + + E + G P+ ++ L+ T Sbjct: 193 QALVAYAL-KKANENGFSSCVPPSITKKELIDACGFNPRDMNNERQIYALQDTNLGLVAT 251 Query: 232 SEVSLTNLYSHEIIESKSLPL--RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 +E+ L L +++++E S + ++ +R+EAG+ G+DT+G+ R H+F K EL Sbjct: 252 AEIPLAGLGANKVLELNSGECSKKLVGVSRCYRAEAGARGKDTKGLYRVHEFTKVELFCW 311 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 ++ E S E + +++ L + +V+++ + DLG A K YD+E W+ G+ + E Sbjct: 312 SKPETSAKVLEEIKQFQISVVEELGIPAKVLNMPSNDLGNPAFKKYDIEAWMPGRGKFGE 371 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA-DGSVT 408 ISS S C +FQSRR+N++YRD N+ L++ HTLNG+ +A+ R ++A++EN+ + G ++ Sbjct: 372 ISSASNCTDFQSRRLNTKYRDDNTGKLEYVHTLNGTAMAIPRVIVALVENFYDPSTGKIS 431 Query: 409 IPTVLRPYMNNLAVI 423 +P LR +MN I Sbjct: 432 VPECLREFMNGQRYI 446 >gi|52627363|gb|AAU84694.1| seryl-tRNA synthetase [Prevotella intermedia] Length = 289 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 111/280 (39%), Positives = 165/280 (58%), Gaps = 3/280 (1%) Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 H+++ E L+DF+ K++GA F + G +A +RAL F ++ + GY EV PL Sbjct: 3 CHWDLCEKYNLVDFELGVKITGAGFPIYIGKMARFQRALEAFFLEE-ARKSGYLEVQPPL 61 Query: 200 LVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 LV + GTGQ+P M+ D +LIPT+EV +TN++ EI++ K LP++ + Sbjct: 62 LVNQASGLGTGQLPDKEGQMYHAQADDLYLIPTAEVPVTNIFRDEILDEKELPIKRCAYS 121 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 FR EAGS G+D RG+ R HQF K E+V I + S+ ML E +L +L+L YR Sbjct: 122 SCFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPQHSYQSLNEMLEHVENLLIKLELPYR 181 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 ++ LC GD+ F++ YD EVW A Q + E+SS S ++Q+ R++ RYR K ++ Sbjct: 182 ILRLCGGDMSFTSAICYDFEVWSAAQGRWLEVSSVSNFESYQANRLHCRYRRAEDKKIEL 241 Query: 379 THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 HTLNGS +A+ R + AILEN +G + +P VL PY Sbjct: 242 CHTLNGSALALPRIVAAILENNQTPEG-IRVPKVLVPYCG 280 >gi|6321799|ref|NP_011875.1| Dia4p [Saccharomyces cerevisiae S288c] gi|731635|sp|P38705|SYSM_YEAST RecName: Full=Seryl-tRNA synthetase, mitochondrial; AltName: Full=Digs into agar protein 4; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|500705|gb|AAB68940.1| Yhr011wp [Saccharomyces cerevisiae] gi|45270100|gb|AAS56431.1| YHR011W [Saccharomyces cerevisiae] gi|151943953|gb|EDN62246.1| conserved protein [Saccharomyces cerevisiae YJM789] gi|285809913|tpg|DAA06700.1| TPA: Dia4p [Saccharomyces cerevisiae S288c] Length = 446 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 114/435 (26%), Positives = 215/435 (49%), Gaps = 24/435 (5%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYIL---SLDEKNRILIKKIE----DIRARRNSNS 55 D++ I + +++ R L +++ I+ L + IK+I+ DI+ +R S Sbjct: 22 DVKKIIEMIPQYQTSIQNREL-IEADSIIRSLQLLGERYQNIKEIDKVIADIQIQRKSIE 80 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 AQI + + + + LKEQ + E+ + + +PN VP+ Sbjct: 81 AQI-----KKDKTKITEYSAALKALKEQYNDQNSKSSELKKKILETCKSLPNTLDPTVPL 135 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 I K ++ H +I ++D A+ ++G + L A LE Sbjct: 136 DAPQ---IEQWINPLKTHKTSEAQAHVDIMLKKNMLDLQTASNVTGMSWYYLLNDGARLE 192 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPT 231 +AL + + +E+G++ P + + E + G P+ ++ L+ T Sbjct: 193 QALVAYAL-KKANENGFSSCVPPSITKKELIDACGFNPRDMNNERQIYALQDTNLGLVAT 251 Query: 232 SEVSLTNLYSHEIIESKSLPL--RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 +E+ L L +++++E S + ++ +R+EAG+ G+DT+G+ R H+F K EL Sbjct: 252 AEIPLAGLGANKVLELNSGECSKKLVGVSRCYRAEAGARGKDTKGLYRVHEFTKVELFCW 311 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 ++ E S E + +++ L + +V+++ + DLG A K YD+E W+ G+ + E Sbjct: 312 SKPETSAKVLEEIKQFQISVVEELGIPAKVLNMPSNDLGNPAFKKYDIEAWMPGRGKFGE 371 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA-DGSVT 408 ISS S C +FQSRR+N++YRD N+ L++ HTLNG+ +A+ R ++A++EN+ + G ++ Sbjct: 372 ISSASNCTDFQSRRLNTKYRDDNTGKLEYVHTLNGTAMAIPRVIVALVENFYDPSTGKIS 431 Query: 409 IPTVLRPYMNNLAVI 423 +P LR +MN I Sbjct: 432 VPECLREFMNGQRYI 446 >gi|320038747|gb|EFW20682.1| seryl-tRNA synthetase [Coccidioides posadasii str. Silveira] Length = 541 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 134/494 (27%), Positives = 213/494 (43%), Gaps = 69/494 (13%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ IR+N E R+ SE I +L ++ L + + R++ I Sbjct: 51 NVKHIRENAELYSQNCIDRNYRSLSEYPSRIKTLADEAAQLQRSLNAPRSKIKQVQRAIA 110 Query: 60 QA---------IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A G +DAL E LK + + +++L +PN+ Sbjct: 111 KLATSSTEGKGKASGKNEELDALHLEAKQLKHASQSMTDRREKCLEEVQQLALSLPNLTS 170 Query: 111 EEVPIGTSANENILIRSVGKKP----SAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 +E P G I + P S+ +R H IG +LGL+DF + +G + Sbjct: 171 KETPRGDIPRVVNYINYDPRSPPGFVSSPEPTRNHVSIGTSLGLLDFTSSATSTGWGWYY 230 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--- 223 LT A LE+AL Q+ + + G+ VS P LV G P+ ++ Sbjct: 231 LTNEGALLEQALVQYALSV-AMRRGWKPVSPPTLVYSYIAEACGFQPRDVNNEQQIWSIE 289 Query: 224 --------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 R L T+E+ L +Y+ + I + LPL+F ++ +R+EAG+ G DT+G+ Sbjct: 290 QNEKDKSKPQRCLTGTAEIPLAAMYAGQEIPADKLPLKFIGISRCYRAEAGARGVDTKGL 349 Query: 276 LRQHQFWKCELVSITR--EEDSFTE------------------HERMLSCAEEILKRLDL 315 R H+F K EL E + MLS EIL L+L Sbjct: 350 YRVHEFTKVELFGWADDIPEANSKSATTTTTTTTTSSSSSSTLFSEMLSIQTEILSSLNL 409 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQ-----------------NLYREISSCSTCGN 358 R++ + T DLG SA + D+E + N + E++S S C + Sbjct: 410 PCRILEMPTADLGASAARKQDIETLFPSRLHHTLTQQPSQAESFDHNGWGEVTSASICTD 469 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYM 417 +QSRR+ +R R + +F HT+NG+ VAV R L AILEN + G V +P VLR +M Sbjct: 470 YQSRRLGTRVRT--GAAARFPHTVNGTAVAVPRVLAAILENGWDEKRGVVIVPEVLRNWM 527 Query: 418 NNLAVI-KKEHILE 430 + I +E ++E Sbjct: 528 GGIETIGGREGMVE 541 >gi|303317528|ref|XP_003068766.1| seryl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108447|gb|EER26621.1| seryl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 541 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 134/494 (27%), Positives = 213/494 (43%), Gaps = 69/494 (13%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ IR+N E R+ SE I +L ++ L + + R++ I Sbjct: 51 NVKHIRENAELYSQNCIDRNYRSLSEYPSRIKTLADEAAQLQRSLNAPRSKIKQVQRAIA 110 Query: 60 QA---------IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A G +DAL E LK + + +++L +PN+ Sbjct: 111 KLATSSTEGKGKASGKNEELDALHLEAKQLKHASQSMTDRREKCLEEVQQLALSLPNLTS 170 Query: 111 EEVPIGTSANENILIRSVGKKP----SAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 +E P G I + P S+ +R H IG +LGL+DF + +G + Sbjct: 171 KETPRGDIPRVVNYINYDPRSPPGFVSSPEPTRNHVSIGTSLGLLDFTSSATSTGWGWYY 230 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--- 223 LT A LE+AL Q+ + + G+ VS P LV G P+ ++ Sbjct: 231 LTNEGALLEQALVQYALSV-AMRRGWKPVSPPTLVYSYIAEACGFQPRDVNNEQQIWSIE 289 Query: 224 --------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 R L T+E+ L +Y+ + I + LPL+F ++ +R+EAG+ G DT+G+ Sbjct: 290 QNEKDKSKPQRCLTGTAEIPLAAMYAGQEIPADKLPLKFIGISRCYRAEAGARGVDTKGL 349 Query: 276 LRQHQFWKCELVSITR--EEDSFTE------------------HERMLSCAEEILKRLDL 315 R H+F K EL E + MLS EIL L+L Sbjct: 350 YRVHEFTKVELFGWADDIPEANSKSATTTTTTTTTSSSSSSTLFSEMLSIQTEILSSLNL 409 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQ-----------------NLYREISSCSTCGN 358 R++ + T DLG SA + D+E + N + E++S S C + Sbjct: 410 PCRILEMPTADLGASAARKQDIETLFPSRLHHTLTQQPSQAEPFDHNGWGEVTSASICTD 469 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYM 417 +QSRR+ +R R + +F HT+NG+ VAV R L AILEN + G V +P VLR +M Sbjct: 470 YQSRRLGTRVRT--GAAARFPHTVNGTAVAVPRVLAAILENGWDEKRGVVIVPEVLRNWM 527 Query: 418 NNLAVI-KKEHILE 430 + I +E ++E Sbjct: 528 GGIETIGGREGMVE 541 >gi|154313426|ref|XP_001556039.1| hypothetical protein BC1G_05410 [Botryotinia fuckeliana B05.10] gi|150849479|gb|EDN24672.1| hypothetical protein BC1G_05410 [Botryotinia fuckeliana B05.10] Length = 506 Score = 272 bits (696), Expect = 7e-71, Method: Composition-based stats. Identities = 132/461 (28%), Positives = 215/461 (46%), Gaps = 37/461 (8%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +D + IR NPE + + +R+ + QS I++L E+ + +R R N Q+ Sbjct: 47 IDTKHIRANPELYETSCLERNYKLQSTYPAKIINLFEQWHDYQRDARSLRERNNKLKLQL 106 Query: 59 G--QAIAEGNLSLV--------DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 +AI + + + + E +LK+++ +E E + + + L S IPN+ Sbjct: 107 ANPKAIRDDGSEEIQKLRALSKEEIIAEARSLKDKISEIESSESMLMTEINTLASAIPNL 166 Query: 109 PLEEVPIGTSANENILIRSVGKKP--SAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 + P G+ I + S+ + R H IG L L+DF A SG + Sbjct: 167 TSDSTPRGSEPKVIGTINEHPEPKAASSDRVWRSHVHIGSELNLLDFSSAANTSGWGWYY 226 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--- 223 L A LE+AL Q+ + L G++ VS P +V G P+ D Sbjct: 227 LLNGAALLEQALIQYSLSLAL-SKGWSIVSPPSMVYSHIASACGFQPRDQSDEQQIYSIT 285 Query: 224 ----------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 L T+E+ L + ++ + LPL+ + +R+EAG+ G DT+ Sbjct: 286 QSPSDAESAKPTYSLAGTAEIPLAGMKANTTLHESLLPLKTIATSRCYRAEAGARGIDTK 345 Query: 274 GMLRQHQFWKCELVSITREEDSFTE--HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 G+ R H+F K E+ + T T MLS IL LDLH R++ + + DLG SA Sbjct: 346 GLYRVHEFTKVEMFAWTSPSLPETTEIFNEMLSLQTTILTSLDLHCRILEMPSTDLGASA 405 Query: 332 CKTYDLEVWLAGQ----NLYREISSCSTCGNFQSRRMNSRYR-DPNSKSLKFTHTLNGSG 386 + D+E + + N + E++S S CG++QSRR+ +R D N + F T+NG+ Sbjct: 406 MRKIDIEAFFPSRRERDNGWGEVTSLSICGDYQSRRLATRVDIDKNGGKIAFPWTVNGTA 465 Query: 387 VAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKKE 426 +AV R + AILEN + + V +P VL P+M V+K+E Sbjct: 466 LAVPRIVAAILENGWDEERKEVRVPEVLWPWMAGRKVLKRE 506 >gi|189189974|ref|XP_001931326.1| seryl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972932|gb|EDU40431.1| seryl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 476 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 123/459 (26%), Positives = 206/459 (44%), Gaps = 37/459 (8%) Query: 1 MLDIQ-WIRQ---NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKK------------ 43 MLDI +I++ +PE + + KKR + + I++ E + Sbjct: 1 MLDINDFIKERGGHPEKIRESQKKRCAPVEIVDEIIADFEGKKNWKLAYIAILTYTMYRP 60 Query: 44 -IEDIRARRNSNSAQ--IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 IR N+ Q I + N L E L+ + + E E + L Sbjct: 61 PSHTIRCNTNTFETQTNILHLSEKKNKEDATELLEEKKRLEAEKKEKDAEAAEKLAKLHA 120 Query: 101 LISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG---EALGLMDFDRAT 157 + N ++VP+ + + N + ++ + + L D +R T Sbjct: 121 KAKSVGNYVYKDVPVSDNEDNNAVQKTWAPEGRKAEFKADGIPHHGVLARLNGYDPERGT 180 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K+ G R LTG+ L +AL + ++ G+T P + + M T Q+ F + Sbjct: 181 KIVGHRGYCLTGYGVFLNQALINYGLEF-LFSKGFTPNQPPFFMLRDQMAKTAQLSDFDE 239 Query: 218 DMFCTTD-------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 +++ T+ ++LI TSE ++ L+S E + S LP+++ + +FR EAGS G+ Sbjct: 240 ELYKVTESKDKPETDKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEAGSHGK 299 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFS 330 D G+ R HQF K E +T E S+ + ML+ +EE + L L Y+VV++ +G L + Sbjct: 300 DAWGIFRIHQFEKVEQFLLTHPEKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSGALNNA 359 Query: 331 ACKTYDLEVWLA--GQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSG 386 A DLE W G Y+E+ S S C ++Q+R + R + N+ ++ H LNG+ Sbjct: 360 ASMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHALNGTL 419 Query: 387 VAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL-AVIK 424 A R L ILENY +G T+P VLR Y+ + Sbjct: 420 CATERTLCCILENYQTPEG-FTVPEVLRKYIPGQPEFLP 457 >gi|228008415|ref|NP_076126.2| seryl-tRNA synthetase, mitochondrial precursor [Mus musculus] gi|12845978|dbj|BAB26981.1| unnamed protein product [Mus musculus] gi|26352626|dbj|BAC39943.1| unnamed protein product [Mus musculus] gi|51260917|gb|AAH79664.1| Seryl-aminoacyl-tRNA synthetase 2 [Mus musculus] gi|74183708|dbj|BAE24469.1| unnamed protein product [Mus musculus] gi|148692173|gb|EDL24120.1| seryl-aminoacyl-tRNA synthetase 2 [Mus musculus] Length = 518 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 126/449 (28%), Positives = 206/449 (45%), Gaps = 32/449 (7%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDI----------- 47 LD++ + PE +L+ R E I+S ++ R L ++I + Sbjct: 58 LDMESVCACPEKAARSLELRKGELRPADLPAIISTWQELRQLREQIRSLEAEKEAVAEAV 117 Query: 48 RARR-NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 RA N +S Q+ L+ +++QL L +E ++ L + +P Sbjct: 118 RALLANQDSDQV------QKDPQYQGLRARGREIRKQLTPLYPQETQLEEQLYQQALRLP 171 Query: 107 NVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 N + P+G + ++ VG+KP+ R H EIGE L ++ R + +SG R Sbjct: 172 NQTHPDTPVGDESQARVVRV-VGEKPAFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYY 230 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---- 222 L G A L+ L F + G+T ++ P L+R G G P Sbjct: 231 LRGAGALLQHGLVNFTLS-KLVSRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPS 289 Query: 223 -TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + L T+EV L + + + LP+R + +R+E + G++ G+ R H F Sbjct: 290 RFEDLNLAGTAEVGLAGYFMDHSVAFRDLPVRMVCASTCYRAETDT-GKEPWGLYRVHHF 348 Query: 282 WKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 K E+ +T E S + LS EIL L LH+RV+ + T +LG A + +D+E Sbjct: 349 TKVEMFGVTGPGLEQSSQLLDEFLSLQVEILTELGLHFRVLDMPTQELGLPAYRKFDIEA 408 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ G+ Y E++S S C +FQSRR+ + + L+F HT+N + AV R LIA+LE+ Sbjct: 409 WMPGRGRYGEVTSASNCTDFQSRRLYIMFETETGE-LQFAHTVNATACAVPRVLIALLES 467 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 DGSV +P L+PY+ + H+ Sbjct: 468 NQQKDGSVLVPAALQPYLGTDRITAPTHV 496 >gi|322700466|gb|EFY92221.1| putative mitochondrial serine-tRNA ligase [Metarhizium acridum CQMa 102] Length = 515 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 137/458 (29%), Positives = 224/458 (48%), Gaps = 37/458 (8%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +DI+ IRQNPE ++ +R+ Q+ IL L + ++L ++ +R R N + Sbjct: 39 IDIKHIRQNPELYELTCLERNYRNQATYPARILELHSEWQVLQRQGRALRERSNLLRKFL 98 Query: 59 GQAIAEGNLSLVDALKN--------ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 V+ ++ E LK +L ++EK E E + ++ L IPN+ Sbjct: 99 ANPATSSGDDDVEDIREMSREQVQDEARKLKGELAVIEKGEAEAVAEMEALALEIPNLTS 158 Query: 111 EEVPIGTSA---NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 + P G A + + + R H +G LGL DF A SG + L Sbjct: 159 HDTPRGDEAVLLSYINDPPTAFDNSPENKVWRSHVHVGSELGLFDFSGAATASGWGWYYL 218 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD---------- 217 G A LE+AL Q+ + + T +G+T+VS P +V G P+ Sbjct: 219 VGEAAQLEQALVQYALAVAT-RYGWTQVSPPTMVYSHIGAACGFQPRDQHGEQQVYAIAQ 277 Query: 218 ---DMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 D L TSE+SL + ++ I+ + LP++ ++ +R+EAG+ G DT+G Sbjct: 278 SKADADRGVPEMCLAGTSEISLAGMKANTTIDPEDLPMKRVAVSRCYRAEAGARGADTKG 337 Query: 275 MLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 + R H+F K E+ + T +D+ +E ML EIL+ L L+ RV+S+ T DLG SA Sbjct: 338 LYRVHEFTKVEMFAWTSPGQDDAQDVYEEMLDIQTEILQSLGLYCRVLSMPTADLGASAS 397 Query: 333 KTYDLEVWLAGQ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVA 388 + D+E W + N + E++S STC ++Q+RR+ +R R + F T NG+ +A Sbjct: 398 RKVDIEAWFPSRQSINNGWGELTSASTCTDYQTRRLATRTRV--DGKISFPWTCNGTALA 455 Query: 389 VGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKK 425 V R + A+LEN + + G+V IP LRP+M+ L + + Sbjct: 456 VPRVMAALLENGWDEETGTVAIPEALRPWMDGLERMGR 493 >gi|301622150|ref|XP_002940400.1| PREDICTED: seryl-tRNA synthetase, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 505 Score = 272 bits (695), Expect = 9e-71, Method: Composition-based stats. Identities = 121/441 (27%), Positives = 208/441 (47%), Gaps = 22/441 (4%) Query: 2 LDIQWIRQNPEHL-DIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD++ + ++ E L+++ + + ++++ + + ++I+ + +++ + ++ Sbjct: 49 LDMETLTRDLEAAEREYLERKSGSRHGELKEVIAIWNRLEKVKQEIKTLEEEKSAIAKEV 108 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + ++ ++ +L L KEE + S +PN Sbjct: 109 KHMVISEEKQNLQTNPRYALIRKRGKDIRLELSTLYKEESNLEGSFYPRALRLPNRTHPN 168 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 P+G + +L VG KP H EIGE L ++ R + +SG R L G + Sbjct: 169 TPVGDESKARVLEV-VGVKPEFDFKICGHLEIGEDLDIIRQRRLSHVSGHRSYYLRGAGS 227 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-----TTDGRW 227 L+ AL F I + G+ +S P ++R G G Sbjct: 228 LLQHALVNFTIS-KLVKKGFIPMSVPDMLRGAVFEGCGMQADAHASQVYSVDPLQHPDLN 286 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L TSEV + + + + LP+R + +R+E + GR+T G+ R H F K E+ Sbjct: 287 LAGTSEVGIAGFFMDHAVMLQDLPVRTVCCSTCYRAETDT-GRETWGLYRVHHFTKVEMF 345 Query: 288 SITREE---DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 +T E +S + L +EI L LH++V+ + T +LG A + YD+E W+ G+ Sbjct: 346 GVTANESGIESQEMLDEFLGLQKEIFSELGLHFKVLEMPTQELGLPAYRKYDIEAWMPGR 405 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 Y EISS S C ++QSRR+N Y+ + + L+ HT+NG+ AV R LIAILE+ D Sbjct: 406 GKYGEISSTSNCTDYQSRRLNIMYQRQDGE-LRHAHTVNGTACAVPRLLIAILESNQRKD 464 Query: 405 GSVTIPTVLRPYMNNLAVIKK 425 G+V IP VL+PYM VI+K Sbjct: 465 GAVLIPEVLQPYM-GTDVIEK 484 >gi|114558185|ref|XP_001148068.1| PREDICTED: seryl-tRNA synthetase isoform 1 [Pan troglodytes] Length = 553 Score = 272 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 121/509 (23%), Positives = 211/509 (41%), Gaps = 89/509 (17%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNR------------------ 38 LD+ R +P + +KR +P + ++ D + R Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRYRVSFCYQAGMQWRDLS 62 Query: 39 ILI---------------------KKIEDIRARRNSNSAQIGQAIAEG------------ 65 L + +++ +N S IG+ + + Sbjct: 63 SLQPPPPRFKRFSCLSLLSSWDYRFRADNLNKLKNLCSKTIGEKMKKKEPVGDDESVPEN 122 Query: 66 ----NLSLVDALKN-ETSTLK-------EQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 + DAL N + S +K E + + E ++ + + + I N+ V Sbjct: 123 VLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERIKLEAERFENLREIGNLLHPSV 182 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 PI + + + + + H ++ + + ++ ++G+R L G L Sbjct: 183 PISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVF 241 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----------- 222 LE+AL Q+ + GY + P +R E M Q+ +F ++++ Sbjct: 242 LEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDN 300 Query: 223 -TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 D ++LI TSE + L+ E + + LP+++ L+ FR E GS GRDTRG+ R HQF Sbjct: 301 SYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQF 360 Query: 282 WKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 K E + S+ E M++ AEE + L + Y +V++ +G L +A K DLE Sbjct: 361 EKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEA 420 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAIL 397 W G +RE+ SCS C ++Q+RR+ RY ++F H LN + A R + AIL Sbjct: 421 WFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAIL 480 Query: 398 ENYLNADGSVTIPTVLRPYM--NNLAVIK 424 ENY G +T+P L+ +M +I Sbjct: 481 ENYQTEKG-ITVPEKLKEFMPPGLQELIP 508 >gi|23822217|sp|Q9JJL8|SYSM_MOUSE RecName: Full=Seryl-tRNA synthetase, mitochondrial; AltName: Full=SerRSmt; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; Flags: Precursor gi|9188537|dbj|BAA99558.1| mitochondrial seryl-tRNA synthetase [Mus musculus] Length = 518 Score = 272 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 126/449 (28%), Positives = 206/449 (45%), Gaps = 32/449 (7%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDI----------- 47 LD++ + PE +L+ R E I+S ++ R L ++I + Sbjct: 58 LDMESVCACPEKAARSLELRKGELRPADLPAIISTWQELRQLREQIRSLEAEKEAVAEAV 117 Query: 48 RARR-NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 RA N +S Q+ L+ +++QL L +E ++ L + +P Sbjct: 118 RALLANQDSDQV------QKDPQYQGLRARGREIRKQLTPLYPQETQLEEQLYQQALRLP 171 Query: 107 NVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 N + P+G + ++ VG+KP+ R H EIGE L ++ R + +SG R Sbjct: 172 NQTHPDTPVGDESQARVVRV-VGEKPAFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYY 230 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---- 222 L G A L+ L F + G+T ++ P L+R G G P Sbjct: 231 LRGAGAVLQHGLVNFTLS-KLVSRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPS 289 Query: 223 -TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + L T+EV L + + + LP+R + +R+E + G++ G+ R H F Sbjct: 290 RFEDLNLAGTAEVGLAGYFMDHSVAFRDLPVRMVCASTCYRAETDT-GKEPWGLYRVHHF 348 Query: 282 WKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 K E+ +T E S + LS EIL L LH+RV+ + T +LG A + +D+E Sbjct: 349 TKVEMFGVTGPGLEQSSQLLDEFLSLQVEILTELGLHFRVLDMPTQELGLPAYRKFDIEA 408 Query: 340 WLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 W+ G+ Y E++S S C +FQSRR+ + + L+F HT+N + AV R LIA+LE+ Sbjct: 409 WMPGRGRYGEVTSASNCTDFQSRRLYIMFETETGE-LQFAHTVNATACAVPRVLIALLES 467 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 DGSV +P L+PY+ + H+ Sbjct: 468 NQQKDGSVLVPAALQPYLGTDRITAPTHV 496 >gi|322699748|gb|EFY91507.1| putative serine-tRNA ligase, cytosolic [Metarhizium acridum CQMa 102] Length = 431 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 109/440 (24%), Positives = 189/440 (42%), Gaps = 48/440 (10%) Query: 1 MLD-IQWIRQ---NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD I +I + +PE + + ++R + I++L E +R + ++ N Sbjct: 1 MLDVIDFITERGGDPEKIRESQRRRSANVDVVDEIIALFEDHRRTQYSATQVNSKINDVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QIG D L + L+++ L + E + LK I + N + VP+ Sbjct: 61 KQIGAKKKA--KEDADELLKQKGELEKKKKALVESAVEKDALLKAKIKTVGNYVHDSVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGE---ALGLMDFDRATKLSGARFSVLTGHLA 172 + + N++ R+ + + + E L D DR K+ G R L Sbjct: 119 SNNEDNNVVERTWAPEGATVEKRSNVLSHHEVLLRLDGYDPDRGVKVVGHRGYFLRQWGV 178 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L +AL + ++ S+ GYT + P + + M T Q+ +F ++++ + ++ Sbjct: 179 FLNQALINYGLEF-LSQRGYTPLQTPQFMLKDYMGKTAQLEQFDEELYKVTDGEAKNDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE ++ ++ E + K LP++ K E Sbjct: 238 LIATSEQPISAFHADEWLIPKDLPIK----------------------------AKIEQF 269 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 +T E S+ M+ +EE K L+L Y++VS+ +G L +A K DLE W Q Y Sbjct: 270 LLTDPEKSWDAFHDMIGISEEFYKSLELPYQIVSIVSGALNNAASKKLDLEAWFPFQGEY 329 Query: 348 REISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 +E+ SCS C ++QSR + R+ + K+ H LN + A R + ILENY +G Sbjct: 330 KELVSCSNCTDYQSRALEIRFGSKMQTDVKKKYVHCLNSTLCATTRTMCCILENYQTEEG 389 Query: 406 SVTIPTVLRPYMNNL-AVIK 424 + +P LR Y+ I Sbjct: 390 -LRVPEPLRKYLPGAPEFIP 408 >gi|320163573|gb|EFW40472.1| seryl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864] Length = 540 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 129/493 (26%), Positives = 215/493 (43%), Gaps = 69/493 (13%) Query: 2 LDIQWIRQNPEHLDIALKKR--------HLEPQSEYILSLDEKNRILIKKIEDIRARRNS 53 LD WI N E ++ L+ R + + + L E+NR+L +K +D+RA RN Sbjct: 27 LDYAWIAANAETVERHLQLRQMAAVSEDGVPFNAAHFRELFERNRLLQRKSDDLRAMRNK 86 Query: 54 NSAQIGQ---------------AIAEGNLSLVD-ALKNETSTLKEQLPILEKEEHEVCSS 97 SA + A + + + ++K+++ + EV + Sbjct: 87 LSATYTKPTGAARPAGAPAGTQKDAANTAADAKVQIAEQARSIKKEIADADAALEEVAAQ 146 Query: 98 LKKLISCIPNVPLEEVPIGTSANENIL----------------------IRSVGKKPSAI 135 L +PN +V G + + Sbjct: 147 LFHAAVRVPNDAHPDVANGPNVERVVAVSSRLTAQQETLAASLDARPSLPAHSDPSRIPP 206 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 ++H E+G ALGL D +RA ++G F L G A LE AL Q + G+T + Sbjct: 207 TKYKDHVELGLALGLFDLERAAAVTGHAFYFLKGAGALLELALTQLAMQ-QAMLAGFTPM 265 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFC----TTDGRWLIPTSEVSLTNLYSHEIIESKSLP 251 + P + R E + G P+ D L+ T+E+ L S+ + +++LP Sbjct: 266 TTPDVARTEMVAACGFQPRGEMTQVYSLAAPHDRFSLVGTAEIPLAGFLSNTTVATQALP 325 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE--DSFTEHERMLSCAEEI 309 ++ L+ FRSE G+ G DTRG+ R HQF K E+ + T DS + ++ ++I Sbjct: 326 VKLAALSHCFRSETGAHGSDTRGLYRVHQFSKVEMFAFTGPSVADSQAMLDSIVQVQKQI 385 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR 369 + L+L +RV+ + +LG SA + YD+E W+ G+ + EISS S C ++Q+RR+ R + Sbjct: 386 FESLELDFRVLDMPMKELGASAYRKYDIEAWMPGRVAWGEISSASDCTDYQARRLGIRAK 445 Query: 370 DPNSKSLK----------------FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 + + HT+NG+ A+ R + A+LE + DGS+ +P L Sbjct: 446 AVGGAAPEAKGAHQTDTASQDGNKHLHTVNGTACAIPRTIAALLETHQLEDGSIYLPPAL 505 Query: 414 RPYMNNLAVIKKE 426 RP+M N I E Sbjct: 506 RPFMGNRDRITPE 518 >gi|241956232|ref|XP_002420836.1| putative seryl-tRNA synthetase, putative [Candida dubliniensis CD36] gi|223644179|emb|CAX40988.1| putative seryl-tRNA synthetase, putative [Candida dubliniensis CD36] Length = 455 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 121/437 (27%), Positives = 218/437 (49%), Gaps = 18/437 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ---I 58 +DI I P+ + ++++R L ++ NR L + + ++ N + I Sbjct: 23 IDINDILSRPKEYESSIRRRQLPEDLIENINYITSNRPLQSQ---LFSQINEMKRERDLI 79 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 +++ + K +K L LEK+ + + +PN+ + VP Sbjct: 80 AESLKS-KTGDLQQFKERLKEIKTALKPLEKQVKTLQEEIYAKAESLPNLIDKSVPADPL 138 Query: 119 ANENILIRSVGKKPSAIHL----SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 E + + + A + +H EIG + ++DF+ A+K+SG + L G A L Sbjct: 139 KEEVVQFINCHSEEDAKTFKTLSAHDHKEIGVSFNILDFNVASKVSGPSWYYLIGDGALL 198 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIP 230 E+AL Q+ + + GY ++ P +V+ E + G P ++ G+ L Sbjct: 199 EQALIQYALS-KARKRGYLMLTPPSVVKSEIVSACGFKPNDQNNEKQIYQLEDEGKSLTG 257 Query: 231 TSEVSLTNLYSHEIIES-KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 T+E+ L ++ + S P+++ ++ ++R+EAG++GRDT+G+ R H+F K EL Sbjct: 258 TAEIPLAGFHASSVFPSGTQFPIKYVGVSRAYRAEAGASGRDTKGLYRVHEFTKVELFHF 317 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T E + E E + EI+ L L +++++ T DLG A K YD+E W+ G+ + E Sbjct: 318 TTAEKAAQELEDLKDMQVEIVTELGLSAKLLNMPTSDLGAPAMKKYDIEAWMPGRGSWGE 377 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE-NYLNADGSVT 408 ++SCS CG++QSRR+ RY + LK TLNG+ +AV R ++A++E NY + ++ Sbjct: 378 LTSCSNCGDYQSRRLGIRYNNDQEDRLKHVSTLNGTCMAVPRVIVALIEQNYNSEKNEIS 437 Query: 409 IPTVLRPYMNNLAVIKK 425 IP VL+P+M+ I Sbjct: 438 IPRVLQPFMDGKDKIVP 454 >gi|310796701|gb|EFQ32162.1| seryl-tRNA synthetase [Glomerella graminicola M1.001] Length = 510 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 130/460 (28%), Positives = 213/460 (46%), Gaps = 36/460 (7%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +DI+ IR+N + R+ QS+ I + + + L K +R R N QI Sbjct: 53 IDIRHIRENAVLYEQNCLDRNYTAQSKSPARINQIFAQWQALQKDSRAVRERSNLLRRQI 112 Query: 59 GQAIAEGNLSLV--------DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + + + + L E LK++L +E++E + ++ L IPN+ Sbjct: 113 ANPASSRDGAEFVEMSEMSREELLEEARVLKQRLTAVEQDEARLVEEMEALALAIPNLTS 172 Query: 111 EEVPIGTSANENILIRSVGK--KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLT 168 E P+G N I S+ + R H IG LGL+DF A SG + L Sbjct: 173 EATPLGDEPNVLSYINEHPAEAPSSSDKVWRSHVHIGSELGLLDFAAAGNTSGWGWYYLL 232 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD----------- 217 A LE+AL Q+ + + T H + +V+ P +V G P+ + Sbjct: 233 DEAAQLEQALVQYALAVAT-RHRWRQVAPPSIVYSHIASACGFQPRDQNGEQQVYSLAQS 291 Query: 218 --DMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 D L TSE+ L + + +++ LP++ ++ +R+EAG+ G T+G+ Sbjct: 292 EADAERGKPELCLAGTSEIPLAGMKAESTLDASELPMKRVAVSRCYRAEAGARGASTKGL 351 Query: 276 LRQHQFWKCELVSITREEDSF--TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 R H+F K E+ + T E + M+ EIL L LH RV+ + + DLG SA + Sbjct: 352 YRVHEFTKVEMFAWTPPEADETIEIFQEMVDIQTEILGSLGLHCRVLEMPSADLGASAVR 411 Query: 334 TYDLEVWLAGQ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAV 389 D+E + + + E++S S C ++Q+RR+ +R + L F T+NG+ +AV Sbjct: 412 KCDIEAFFPSRQQQNGGWGEVTSASICTDYQTRRLATRAKI--DGKLMFPWTVNGTALAV 469 Query: 390 GRCLIAILENYLNA-DGSVTIPTVLRPYMNNLAVIKKEHI 428 R L AILE N + SV+IPT L+P+M+ I K+ I Sbjct: 470 PRVLAAILEAGWNEKEMSVSIPTCLQPWMDGKEKIFKQPI 509 >gi|50308197|ref|XP_454099.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643234|emb|CAG99186.1| KLLA0E03433p [Kluyveromyces lactis] Length = 444 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 116/432 (26%), Positives = 221/432 (51%), Gaps = 22/432 (5%) Query: 3 DIQWIRQNPEHLDIALKKRHL------EPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 +++++ + +++ R L + + + L +K+R+ I +++ R + A Sbjct: 22 NVKYMISKLDEFSDSIQARELVDGEELQISLKMLPELYQKSRVADHTIANLQHSRKTIEA 81 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 Q+ Q + + L +E +LK+Q L K + EV + ++ +PN+ VP Sbjct: 82 QVKQ-----DKTRARELGSELKSLKKQYQDLLKTQREVKDQITEVCGSLPNLIHPSVPKT 136 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 +S + I + EH +I G++DF+ A+ ++G + L A LE Sbjct: 137 SSPIIDQWINKQAQYK--PDERFEHLKIMVNKGMVDFETASNVTGTSWYYLCNDGARLEH 194 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTS 232 AL Q+ + + V P +VR+E + G P+ ++ L T+ Sbjct: 195 ALVQYAT-TKARKANFNLVIPPSVVRNEVIDACGFRPRDTNNEQQIYRLSDTDLGLTATA 253 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E++L + I++ S P + + ++R+EAG++G+DT+G+ R H+F K EL + Sbjct: 254 EIALAGMGLDSILDLSSGPKKICGVNRAYRAEAGASGKDTKGLYRVHEFTKVELFVWAKP 313 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E S E + +I++ L L +V+++ + DLG A K YD+E W+ G+ + EI+S Sbjct: 314 EQSDQILEELKQFQIDIVRELGLSAQVLNMPSNDLGSPAYKKYDIEAWMPGRGSFGEITS 373 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA--DGSVTIP 410 S C +FQSRRM++R+R+ + L++ HTLNG+ +AV R ++A++EN + D +++IP Sbjct: 374 TSNCTDFQSRRMHTRFRNEEGE-LEYAHTLNGTAMAVPRVIVALVENNYDPVSD-TISIP 431 Query: 411 TVLRPYMNNLAV 422 L+PY++ + Sbjct: 432 QALQPYLDGMEF 443 >gi|260896044|ref|ZP_05904540.1| serine--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|308086985|gb|EFO36680.1| serine--tRNA ligase [Vibrio parahaemolyticus Peru-466] Length = 202 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 109/201 (54%), Positives = 134/201 (66%) Query: 223 TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 LIPT+EV +TNL I + LP++ T P FRSEAGS GRDTRG++R HQF Sbjct: 1 PRKLSLIPTAEVPVTNLVRDTITDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFD 60 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 K ELV IT+ EDS T E + AE++L+ L+L YR V LCTGD+GF A KTYDLEVW+ Sbjct: 61 KVELVQITKPEDSMTALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVP 120 Query: 343 GQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 Q YREISSCS +FQ+RRM +R+R K + HTLNGSG+AVGR ++AILEN Sbjct: 121 AQETYREISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQE 180 Query: 403 ADGSVTIPTVLRPYMNNLAVI 423 ADG + IP VL+ YM I Sbjct: 181 ADGRIAIPAVLQKYMGGATHI 201 >gi|68487382|ref|XP_712462.1| hypothetical protein CaO19.8792 [Candida albicans SC5314] gi|68487674|ref|XP_712318.1| hypothetical protein CaO19.1201 [Candida albicans SC5314] gi|46433696|gb|EAK93128.1| hypothetical protein CaO19.1201 [Candida albicans SC5314] gi|46433851|gb|EAK93279.1| hypothetical protein CaO19.8792 [Candida albicans SC5314] Length = 496 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 122/436 (27%), Positives = 216/436 (49%), Gaps = 16/436 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IG 59 +DI I P+ + ++ +R L + ++ NR L + + ++ N + I Sbjct: 64 IDINDILSRPKEYESSIHRRQLPQELIENINFITSNRPLQAQ---LFSQINDMKKERTIL 120 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + N+ + K LK +L LEK+ + + +PN+ VP Sbjct: 121 AERLKSNVGDLQQFKERLKQLKSELKPLEKQVKTIQEKIYAKAESLPNLIDVTVPTDPLK 180 Query: 120 NENILIRSVGKKP----SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 E + + + S +H EIG ++DF A+++SG + L G A LE Sbjct: 181 EEVVQFINCQSEEDAKVSNSSAVHDHKEIGVNFNILDFSVASRVSGPSWYYLIGDGALLE 240 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPT 231 +AL Q+ + GY ++ P +V+ E + G P ++ + + L T Sbjct: 241 QALIQYALS-KARRRGYLMLTPPSIVKSEIVGACGFKPNDQNNEKQIYELKGEHKSLTGT 299 Query: 232 SEVSLTNLYSHEIIES-KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 +E+ L +S + S P+++ ++ ++R+EAG++G+DT+G+ R H+F K EL T Sbjct: 300 AEIPLAAFHSSTVFPSGTQFPIKYVGVSRAYRAEAGASGKDTKGLYRVHEFTKVELFHFT 359 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 EE + E E + EI+ L L +++++ + DLG A K YD+E W+ G+ + E+ Sbjct: 360 TEEKAAQELEDLKDMQVEIVTELGLSAKLLNMPSSDLGAPAMKKYDIEAWMPGRGSWGEL 419 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS-VTI 409 +SCS CG++QSRR+ RY D LK TLNG+ +AV R ++A++E NA+ + ++I Sbjct: 420 TSCSNCGDYQSRRLGIRYNDDQEGRLKHVSTLNGTCMAVPRVIVALIEQNFNAEKNEISI 479 Query: 410 PTVLRPYMNNLAVIKK 425 P VL+P+M+ I Sbjct: 480 PEVLQPFMDGKDKIVP 495 >gi|194377936|dbj|BAG63331.1| unnamed protein product [Homo sapiens] Length = 518 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 115/411 (27%), Positives = 191/411 (46%), Gaps = 17/411 (4%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA------LKNETSTLKEQL 84 +S ++ R L ++I + + + + + +A + V L+ ++++L Sbjct: 90 ISTWQELRQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQDPKYQGLRARGREIRKEL 149 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 L E ++ +PN +VP+G + +L VG KP R H EI Sbjct: 150 VHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHM-VGDKPVFSFQPRGHLEI 208 Query: 145 GEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDE 204 GE L ++ R + +SG R L G A L+ L F + G+T ++ P L+R Sbjct: 209 GEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLL-RRGFTPMTVPDLLRGA 267 Query: 205 AMYGTGQIPKFADDMFCT-----TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 G G P L T+EV L + + + LP+R + Sbjct: 268 VFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRMVCSST 327 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHY 317 +R+E + G++ RG+ R H F K E+ +T E S E LS EIL L LH+ Sbjct: 328 CYRAETNT-GQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHF 386 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLK 377 RV+ + T +LG A + +D+E W+ G+ + E++S S C +FQSRR++ ++ + L+ Sbjct: 387 RVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQ 445 Query: 378 FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 F HT+N + AV R LIA+LE+ DGSV +P L+ Y+ + H+ Sbjct: 446 FAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYLGTDRITAPTHV 496 >gi|157819737|ref|NP_001099710.1| seryl-tRNA synthetase, mitochondrial [Rattus norvegicus] gi|149056448|gb|EDM07879.1| seryl-tRNA synthetase 2 (predicted) [Rattus norvegicus] Length = 518 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 124/453 (27%), Positives = 200/453 (44%), Gaps = 40/453 (8%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDI----------- 47 LD++ + PE +L+ R E I+S ++ R L ++I+ + Sbjct: 58 LDMESVCACPEKAARSLELRKGELRPADLPAIISTWQELRQLREQIQSLEAEKEAVAEAV 117 Query: 48 -----RARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 + N L+ +++QL L E ++ + Sbjct: 118 RALLAKQDSNQVQK----------DPQYQGLRTRGREIRKQLTPLYPRETQLEEEFYQQA 167 Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGA 162 +PN + P+G + +L VG KP+ R H EIGE L ++ R + +SG Sbjct: 168 LRLPNQTHPDTPVGDESQARVLRV-VGDKPAFSFQPRGHLEIGEKLDIIRQKRLSHVSGH 226 Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 R L G A L+ L F + G+T ++ P L+R G G P Sbjct: 227 RSYYLRGAGALLQHGLVNFTLS-KLVSRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYN 285 Query: 223 -----TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + L T+EV L + + S+ LP+R + +R+E + G++ G+ R Sbjct: 286 IDPSRFEDLNLAGTAEVGLAGYFMDHAVASRDLPVRMVCASTCYRAETDT-GKEPWGLYR 344 Query: 278 QHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 H F K E+ +T E S E LS EIL L LH+RV+ + T +LG A + + Sbjct: 345 VHHFAKVEMFGVTGPGLEQSSQLLEEFLSLQVEILTELGLHFRVLDMPTQELGLPAYRKF 404 Query: 336 DLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIA 395 D+E W+ G+ Y E++S S C +FQSRR+ + + L+F HT+N + AV R LIA Sbjct: 405 DIEAWMPGRGRYGEVTSASNCTDFQSRRLYIMFETETGE-LQFAHTVNATACAVPRVLIA 463 Query: 396 ILENYLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 +LE+ DGSV +P L+PY+ + H+ Sbjct: 464 LLESNQQKDGSVLVPAALQPYLGTDRITAPTHV 496 >gi|261886442|ref|ZP_06010481.1| seryl-tRNA synthetase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 367 Score = 270 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 153/367 (41%), Positives = 227/367 (61%), Gaps = 5/367 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M++++ I N + + LK + ++ + +L + +I +++E+++A +N+ S ++G Sbjct: 1 MINLKLIETNFDEFNAKLKAKKVDEGVLKNLLDTYNELKIKKQELENLQAVQNAKSKEVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 G + LK E K+ + E+ + L + S +PNV ++VP+G Sbjct: 61 ILARSG--ADTTLLKTELEENKKLMQTASNLVSELETKLDTVASRVPNVIDDDVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N+N+ I+++ + +EHFE+GE LG +DF KLSG+RF+VL A L RAL Sbjct: 119 NDNVCIKTILEPREFNFTPKEHFELGENLGWLDFATGAKLSGSRFTVLRSDGARLSRALV 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-GRWLIPTSEVSLTN 238 FMID +T G+ V+ P LV +YGTGQ+PKF +D++ D +LIPTSEV +TN Sbjct: 179 NFMIDFNT-ARGFELVNVPFLVNSNTLYGTGQLPKFEEDLYKIRDEDLYLIPTSEVPVTN 237 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y++EII ++LP++ T + FR EAGSAGRDTRGM+RQHQF K ELVSI++ EDS Sbjct: 238 IYNNEIIPVENLPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELVSISKPEDSAKI 297 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M+SCA ++LK L L +R + LC+ DLGF A KT DLEVWL GQ YREISS S + Sbjct: 298 LDEMVSCASDMLKELGLPHRHMMLCSADLGFGAAKTIDLEVWLPGQGKYREISSISNTRD 357 Query: 359 FQSRRMN 365 FQ+RR Sbjct: 358 FQARRAK 364 >gi|50426331|ref|XP_461762.1| DEHA2G04972p [Debaryomyces hansenii CBS767] gi|49657432|emb|CAG90219.1| DEHA2G04972p [Debaryomyces hansenii] Length = 462 Score = 270 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 126/435 (28%), Positives = 215/435 (49%), Gaps = 19/435 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKN---RILIKKIEDIRARRNSNSAQIG 59 D++ I N E A+ +R + + + L +I + R+ S Sbjct: 30 DLKNIINNSEKYKDAIIRRKTPELIQSLEYVVTNRPIEIELTNRINTKKHERSKLS---- 85 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + E +K E + K +L LE E E+ + + +PN+ VP T Sbjct: 86 EVMKELKNKAPIEVKEELAKAKSELKTLEAERDELSQKIHRYAESLPNLLDTTVPKDTLQ 145 Query: 120 NENILIRSVGKKP----SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 + + + + S +H IGE L +M+F+ A ++SG+ + L G A LE Sbjct: 146 GDIVKFINCASEQDAVNSMPTSKFDHKTIGEKLNIMNFNIAARISGSSWYYLVGDGALLE 205 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPT 231 +AL Q+ + +GYT + P +V++E + G P + T D LI T Sbjct: 206 QALIQYGLS-KARVNGYTMIIPPSIVKNEIISACGFKPNDQNGEQQVYQLTNDDLSLIGT 264 Query: 232 SEVSLTNLYSHEIIESKS-LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 +E+ L +S S P+++ ++ S+R+EAG+ G DT+G+ R H+F K EL T Sbjct: 265 AEIPLGAYHSSSTFPSSQNYPIKYVGISRSYRAEAGARGSDTKGLYRVHEFTKVELFHFT 324 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + + E E + + I++ L L +++++ + DLG A K +D E W+ G+ + E+ Sbjct: 325 TPDKAAQELEDLKNLQISIIEDLGLSAKMINMPSSDLGAPALKKFDCEAWMPGREGWGEL 384 Query: 351 SSCSTCGNFQSRRMNSRYRD-PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA-DGSVT 408 +SCS C ++QSRR+ RY D + LK+ HTLNG+ VA+ R ++AI+E + + S+ Sbjct: 385 TSCSNCSDYQSRRLGIRYEDGKDENKLKYIHTLNGTCVAIPRVIVAIMEQFYDPATESII 444 Query: 409 IPTVLRPYMNNLAVI 423 IP VLRPYM++ I Sbjct: 445 IPKVLRPYMDDKERI 459 >gi|75675968|ref|YP_318389.1| seryl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] gi|74420838|gb|ABA05037.1| seryl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] Length = 497 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 135/222 (60%), Positives = 164/222 (73%), Gaps = 6/222 (2%) Query: 208 GTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 K + + WLIPT+EV LTNL I++ K LPLRFT L P FR+EAG+ Sbjct: 278 AMPDFVKLREQL--PVSTSWLIPTAEVPLTNLVRESILDEKELPLRFTALTPCFRAEAGA 335 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 AGRDTRGM+RQHQF K ELVSIT E S EHERMLSCAEE+L+RLDLHYRV++LCTGD+ Sbjct: 336 AGRDTRGMIRQHQFTKVELVSITTPETSKDEHERMLSCAEEVLRRLDLHYRVMTLCTGDM 395 Query: 328 GFSACKTYDLEVWLAGQNL---YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNG 384 GF++ KTYD+EVW+ GQ YREISSCS CG+FQ+RRM++RYR + K +F HTLNG Sbjct: 396 GFASQKTYDIEVWMPGQGEGGAYREISSCSVCGDFQARRMDARYRSSDGK-PRFVHTLNG 454 Query: 385 SGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 SG AVGR LIA++E Y ADGS+ +P VL+PYM L VI K+ Sbjct: 455 SGTAVGRALIAVMETYQQADGSIAVPDVLQPYMGGLKVIAKD 496 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 104/227 (45%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE------PQSEYILSLDEKNRILIKKIEDIRARRNSN 54 M DI+ IR NP+ D ALK+R L SE IL D + R LI +E ++ RN Sbjct: 1 MHDIKAIRDNPQAFDAALKRRRLSDTDRVRFSSEEILKFDAERRTLIATVEQWKSTRNQI 60 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLK-EQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 S +IG A+ E + V AL + LK + + E LK L++ IPN+PL+EV Sbjct: 61 SKEIGIAMREKDEVRVAALMEKVDRLKHDIISGGSNLIIEREVGLKNLLAEIPNLPLDEV 120 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 P G + N+ GKK + H ++G ALG MDF+ A KLSGARF VL LA Sbjct: 121 PDGADEHGNVQHHIFGKKRDYAFTPKPHDDLGGALGDMDFEAAAKLSGARFVVLKRGLAR 180 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 LERA+GQF +D+HT EHGYTEV+ PLLVRD+AM+GT Q+PKF +D F Sbjct: 181 LERAIGQFFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFREDQF 227 >gi|196007454|ref|XP_002113593.1| hypothetical protein TRIADDRAFT_57175 [Trichoplax adhaerens] gi|190583997|gb|EDV24067.1| hypothetical protein TRIADDRAFT_57175 [Trichoplax adhaerens] Length = 477 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 119/420 (28%), Positives = 200/420 (47%), Gaps = 24/420 (5%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG-QA 61 D + R+ + + +K R + + ++ L K + +I +R RN S +I Q Sbjct: 39 DFDYYRKKTDIIRENIKNRCCDADIDEVVKLHNKFGKICTEISALRHERNEISKKIKLQE 98 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN- 120 + +G V L + +KE++P LE + + L + S IPN + Sbjct: 99 VKKGEDDYV-KLVDLGKKIKEKMPQLEDTKLHYENQLFEAASKIPNDTHPDTSHVELHFL 157 Query: 121 ---------ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 ++ + G KP + H +IGE L L F A S +F L G Sbjct: 158 LLKPIGDEENATILSTFGDKPVFDLDLKNHIQIGEKLNL--FRSAALQSDPKFCYLLGDA 215 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRW 227 A LE A+ Q+ I T + G+T + P +V+ + G G P+ + + Sbjct: 216 ALLELAIIQYAIQKLT-QKGFTTILPPDIVKPRLIEGCGYHPRTEHAQIYSLDPSHGELR 274 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L TSE+ L ++ ++++K LPLR+ ++ FR+EA + RG+ R HQF K E+ Sbjct: 275 LAGTSEIPLCGMFMDSMLDAKDLPLRYVAVSHCFRAEAARHTSEERGLYRLHQFTKVEMF 334 Query: 288 SITREE---DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 IT E +S + +++ L LH R++ + T +L SA + +D+E W+ G+ Sbjct: 335 GITTNEGHNESDALFNEFVEIQKDLYSNLGLHARILDMPTAELSSSAYRKFDIEAWMPGR 394 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENYLN 402 N Y EISS S C ++QSRR+N +Y+ +K +F HT+N + A+ R +I+ILEN+ Sbjct: 395 NNYGEISSASNCTDYQSRRLNIQYKGSKAKHRGRQFVHTVNATACAIPRLIISILENFQQ 454 >gi|119186765|ref|XP_001243989.1| hypothetical protein CIMG_03430 [Coccidioides immitis RS] Length = 609 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 134/495 (27%), Positives = 213/495 (43%), Gaps = 70/495 (14%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ IR+N E R+ SE I SL ++ L + + R++ I Sbjct: 51 NVKHIRENAELYSQNCIDRNYRSLSEYPSRIKSLADEAAQLQRSLNAPRSKIKQVQRAIA 110 Query: 60 QA---------IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A G +DAL E LK+ + + +++L +PN+ Sbjct: 111 KLATSSTEGKGKAPGKNEELDALHLEAKQLKDASQSMTDRREKCLEEVQQLALSLPNLTS 170 Query: 111 EEVPIGTSANENILIRSVGKKP----SAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 +E P G I + P S+ +R H IG +LGL+DF + +G + Sbjct: 171 KETPRGDIPRVVNYINYDPRSPPGFVSSPEPTRNHVSIGTSLGLLDFTSSATSTGWGWYY 230 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--- 223 LT A LE+AL Q+ + + G+ VS P LV G P+ ++ Sbjct: 231 LTNEGALLEQALVQYALSV-AMRRGWKPVSPPTLVYSYIAEACGFQPRDVNNEQQIWSIE 289 Query: 224 --------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 R L T+E+ L +Y+ + I + LPL+F ++ +R+EAG+ G DT+G+ Sbjct: 290 QNEKDKSKPQRCLTGTAEIPLAAMYAGQEIPADKLPLKFIGISRCYRAEAGARGVDTKGL 349 Query: 276 LRQHQFWKCELVSITR--EEDSFTE-------------------HERMLSCAEEILKRLD 314 R H+F K EL E + MLS EIL L+ Sbjct: 350 YRVHEFTKVELFGWADDIPEANSKSATTTTTTTTSSSSSSSSTLFSEMLSIQTEILSSLN 409 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAG-----------------QNLYREISSCSTCG 357 L R++ + T DLG SA + D+E QN + E++S S C Sbjct: 410 LPCRILEMPTADLGASAARKQDIETLFPSRLHHTLTQQPSQAESFDQNGWGEVTSASICT 469 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPY 416 ++QSRR+ +R R + +F T+NG+ VAV R + AILEN + G V +P VLR + Sbjct: 470 DYQSRRLGTRVRT--GAAARFPSTVNGTAVAVPRVMAAILENGWDEKRGVVIVPEVLRNW 527 Query: 417 MNNLAVI-KKEHILE 430 M + I +E ++E Sbjct: 528 MGGIETIGGREGMVE 542 >gi|212527508|ref|XP_002143911.1| seryl-tRNA synthetase [Penicillium marneffei ATCC 18224] gi|210073309|gb|EEA27396.1| seryl-tRNA synthetase [Penicillium marneffei ATCC 18224] Length = 522 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 123/478 (25%), Positives = 202/478 (42%), Gaps = 55/478 (11%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 D++ IR++ + R+ E I L + + L + + D R + +IG Sbjct: 46 DVKLIREHADLFARNCVNRNYAAYEEYPHRISELYAETKRLEEALLDPRRKIKELEKEIG 105 Query: 60 ------QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 ++ E + L+ E LK+ + + S ++KL +PN+ E Sbjct: 106 RVAVNRESNGEEKKQKLAELRKEAQNLKKDSQDTLLRKESLESEIQKLALSLPNLTSPEA 165 Query: 114 PIGTSANENILIRSVGKKPSAI----HLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 P+G I K S+ R H EIG L L+DF + +G + L Sbjct: 166 PVGDEPRVVGYINYDPKDSSSWLKNKQPYRSHVEIGTKLELLDFTCSATSTGWGWYFLIN 225 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----- 224 A LE+AL Q+ + + + + VS P +V G P+ ++ Sbjct: 226 EGALLEQALIQYSMSV-AMKRKFKPVSPPSIVYSYIQEACGYQPRDQNNEQQIWHIEQSE 284 Query: 225 ------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 R L T+E+ L +Y+ I+ LPL+F + +R+EAG+ G DT+G+ R Sbjct: 285 KDKARPQRSLAGTAEIPLAAMYAGRDIDESLLPLKFVGTSRCYRAEAGARGVDTKGLYRV 344 Query: 279 HQFWKCELVSITREEDS-------------FTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 H+F K EL + S E + E+L L+L R++ + T Sbjct: 345 HEFTKVELFGWSNNPRSDASDPLFEKCTPLNELFEELGQIQVEVLTALNLPCRILEMPTN 404 Query: 326 DLGFSACKTYDLEVWLAGQNL----------------YREISSCSTCGNFQSRRMNSRYR 369 DLG SA + D+E + + E++S S C ++QSRR+ +R R Sbjct: 405 DLGASATRKRDIEALFPSRLRAIESESGNSGYDLETGWGEVTSASICTDYQSRRLGTRIR 464 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS-VTIPTVLRPYMNNLAVIKKE 426 + ++ T+NG+ VAV R L AILEN + + V IP VLR +M + I K+ Sbjct: 465 TSQGEKSRYALTVNGTAVAVPRVLAAILENGWDEERQVVVIPEVLRQWMGGMETIGKK 522 >gi|213406754|ref|XP_002174148.1| seryl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] gi|212002195|gb|EEB07855.1| seryl-tRNA synthetase [Schizosaccharomyces japonicus yFS275] Length = 467 Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 125/431 (29%), Positives = 210/431 (48%), Gaps = 21/431 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD + I +N E+L R+++ ++ I+ L + + +++ RA++N+ + Q+ Sbjct: 34 LDYKKIVENAENLKKNCLMRNMKSLADSVPNIVRLYHERIQCLDELKPFRAQKNTVTKQL 93 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + AL E+ +KE + EK+ + L++L +PN E VPIG Sbjct: 94 AD--KNLPPTRRHALLIESRKMKEIMSPSEKKLVLLEQQLQQLCLQLPNQLGEYVPIGPE 151 Query: 119 AN-ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++ + K + + A DFD A SG F G A LE A Sbjct: 152 SDARCVGYICEDKLAQVQQRTYVADHLDIAKRAFDFDSAALGSGHSFVYQWGDAALLEFA 211 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD---------DMFCTTDGRWL 228 L F +D + G+ P +VR + G P+ A+ D+ + L Sbjct: 212 LLNFTVDYAIQQ-GWEFCLVPTIVRTDVARACGFQPRDAEGQQMYELESDVSSNVPPQVL 270 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFT-TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 + T+EVSL ++ L + ++ ++R EAG+ G+ TRGM R H+F K E Sbjct: 271 VGTAEVSLAASALNKTF--TDLKKKCVIGVSRAYRREAGAHGKFTRGMYRLHEFTKAEFF 328 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + T + S + ++ I++ L++ R++ + + +LG SA + YD+E W+ +N + Sbjct: 329 AWTHPDYSSAMLKEIIKLQATIIQMLEIPARILYMPSEELGASASEKYDIEAWMPSRNDF 388 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 EI+S S C ++Q+RR+ +RY N + HTLNG+ VA+ R IAILEN L +DG V Sbjct: 389 GEITSASNCLDYQARRLWTRY--DNGMDTGYVHTLNGTAVAIPRLSIAILENNLQSDGRV 446 Query: 408 TIPTVLRPYMN 418 IP VL+P+MN Sbjct: 447 KIPNVLQPFMN 457 >gi|237708975|ref|ZP_04539456.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] gi|229457037|gb|EEO62758.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] Length = 304 Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats. Identities = 116/301 (38%), Positives = 166/301 (55%), Gaps = 5/301 (1%) Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 + G + + H+E+ + L+DFD K++GA F V G A L+RAL F + Sbjct: 7 WKKMGGMETELPKNALPHWELAKKYDLIDFDLGVKITGAGFPVYKGKGARLQRALINFFL 66 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-FCTTDGRWLIPTSEVSLTNLYSH 242 D GY E+ P +V + YGTGQ+P M C D +LIPT+EV +TN+Y Sbjct: 67 DE-ARASGYEEIMPPTVVNTASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRD 125 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 I++ K LP++ FR EAGS G+D RG+ R H+F K ELV I + E S H+ M Sbjct: 126 VILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEM 185 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSR 362 L E +LK+L+L YR++ LC GD+ F+A +D EV+ Q + E+SS S +Q+ Sbjct: 186 LDHVEGLLKKLELPYRILRLCGGDMSFTAALCFDFEVYSEAQQRWLEVSSVSNFDTYQAN 245 Query: 363 RMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAV 422 R+ RYR K + HTLNGS +A+ R + A+LEN +G + IP L PY + Sbjct: 246 RLKCRYRSAE-KKTELCHTLNGSALALPRIVAALLENNQTPEG-IRIPKALVPYC-GFEM 302 Query: 423 I 423 I Sbjct: 303 I 303 >gi|73959363|ref|XP_866242.1| PREDICTED: similar to seryl-tRNA synthetase isoform 5 [Canis familiaris] Length = 465 Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 106/446 (23%), Positives = 183/446 (41%), Gaps = 51/446 (11%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVRADGEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 IG+ + + +++ + L + + + E + Sbjct: 63 TIGEKMKKKEPVGDESIPEDALNLDDLTADTLANLKVSQIKK------VRLLIDEAILKC 116 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + + +L I G L LE+ Sbjct: 117 DAERIKLEAERFENLREIGNLLHPSVPISNDE--------------------GVLVFLEQ 156 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------TD 224 AL Q+ + GYT + P +R E M Q+ +F ++++ D Sbjct: 157 ALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYD 215 Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 ++LI TSE + L+ E + + LP+++ L+ FR E GS GRDTRG+ R HQF K Sbjct: 216 EKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKI 275 Query: 285 ELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 E + S+ E M++ AE+ + L + Y +V++ +G L +A K DLE W Sbjct: 276 EQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFP 335 Query: 343 GQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENY 400 G +RE+ SCS C ++Q+RR+ RY ++F H LN + A R + AILENY Sbjct: 336 GSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENY 395 Query: 401 LNADGSVTIPTVLRPYM--NNLAVIK 424 G + +P L+ +M +I Sbjct: 396 QTEKG-IVVPEKLKEFMPPGLQELIP 420 >gi|57899338|dbj|BAD87949.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group] gi|57900428|dbj|BAD87664.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group] gi|215697599|dbj|BAG91593.1| unnamed protein product [Oryza sativa Japonica Group] Length = 400 Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 113/382 (29%), Positives = 188/382 (49%), Gaps = 14/382 (3%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R +PE + + + R + + +++LD++ R +++ IR N S Sbjct: 1 MLDINLFRTEKGGDPELIRRSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTS 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +IG+ A AL T +K++L E E E +L + I N+ E VP+ Sbjct: 61 KEIGKLKA--KKEDASALIQSTEEIKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVPV 118 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 N+++R+ G++ +L + H ++ + L ++ ++ ++G R L L Sbjct: 119 SDDEANNLIVRTWGERRLEGNL-KNHVDLCKMLDIVALEKGADVAGGRGYYLKDEGVLLN 177 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTS 232 AL F + + G+ + P +R E M Q+ +F ++++ T + ++LI TS Sbjct: 178 LALINFGLAF-LRKRGFKPMQTPFFMRKETMGKCAQLAQFDEELYKLTGDGEEKYLIATS 236 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E L + + I LP+R+ + FR EAGS GRDT G+ R HQF K E +T Sbjct: 237 EQPLCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSP 296 Query: 293 ED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 D S+ HE M+ +E+ K + L Y++VS+ +G L +A K YDLE W YRE+ Sbjct: 297 NDNESWEMHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYREL 356 Query: 351 SSCSTCGNFQSRRMNSRYRDPN 372 SCS C +FQ+RR+ Y Sbjct: 357 VSCSNCTDFQARRLGIGYGQKK 378 >gi|225579074|ref|NP_001139373.1| seryl-tRNA synthetase, mitochondrial isoform a precursor [Homo sapiens] gi|194373651|dbj|BAG56921.1| unnamed protein product [Homo sapiens] Length = 520 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 126/447 (28%), Positives = 204/447 (45%), Gaps = 26/447 (5%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDIERFCACPEEAAHALELRKGELRSADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAV 117 Query: 59 GQAIAEGNLSLVDALKNETSTLK----------EQLPILEKEEHEVCSSLKKLISCIPNV 108 +A + V ++ + QL +L + + E L+ +PN Sbjct: 118 RALLANQDSGEVQQVRLDPGAGSIFGPTFLPFPGQLSLLVEAQLEEQFYLQA--LKLPNQ 175 Query: 109 PLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLT 168 +VP+G + +L VG KP R H EIGE L ++ R + +SG R L Sbjct: 176 THPDVPVGDESQARVL-HMVGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLR 234 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----T 223 G A L+ L F + G+T ++ P L+R G G P Sbjct: 235 GAGALLQHGLVNFTFN-KLLRRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPARF 293 Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 L T+EV L + + + LP+R + +R+E + G++ RG+ R H F K Sbjct: 294 KDLNLAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCYRAETNT-GQEPRGLYRVHHFTK 352 Query: 284 CELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 E+ +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ Sbjct: 353 VEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWM 412 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 G+ + E++S S C +FQSRR++ ++ + L+F HT+N + AV R LIA+LE+ Sbjct: 413 PGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATACAVPRLLIALLESNQ 471 Query: 402 NADGSVTIPTVLRPYMNNLAVIKKEHI 428 DGSV +P L+ Y+ + H+ Sbjct: 472 QKDGSVLVPPALQSYLGTDRITAPTHV 498 >gi|323333329|gb|EGA74726.1| Dia4p [Saccharomyces cerevisiae AWRI796] gi|323337249|gb|EGA78502.1| Dia4p [Saccharomyces cerevisiae Vin13] gi|323354772|gb|EGA86606.1| Dia4p [Saccharomyces cerevisiae VL3] Length = 418 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 112/424 (26%), Positives = 210/424 (49%), Gaps = 24/424 (5%) Query: 14 LDIALKKRHLEPQSEYIL---SLDEKNRILIKKIE----DIRARRNSNSAQIGQAIAEGN 66 +++ R L +++ I+ L + IK+I+ DI+ +R S AQI + + Sbjct: 5 YQTSIQNREL-IEADSIIRSLQLLGERYQNIKEIDKVIADIQIQRKSIEAQI-----KKD 58 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + + LKEQ + E+ + + +PN VP+ I Sbjct: 59 KTKITEYSAALKALKEQYNDQNSKSSELKKKILETCKSLPNTLDPTVPLDAPQ---IEQW 115 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 K ++ H +I ++D A+ ++G + L A LE+AL + + Sbjct: 116 INPLKTHKTSEAQAHVDIMLKKNMLDLQTASNVTGMSWYYLLNDGARLEQALVAYAL-KK 174 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSH 242 +E+G++ P + + E + G P+ ++ L+ T+E+ L L ++ Sbjct: 175 ANENGFSSCVPPSITKKELIDACGFNPRDMNNERQIYALQDTNLGLVATAEIPLAGLGAN 234 Query: 243 EIIESKSLPL--RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +++E S + ++ +R+EAG+ G+DT+G+ R H+F K EL ++ E S E Sbjct: 235 KVLELNSGECSKKLVGVSRCYRAEAGARGKDTKGLYRVHEFTKVELFCWSKPETSAKVLE 294 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + +++ L + +V+++ + DLG A K YD+E W+ G+ + EISS S C +FQ Sbjct: 295 EIKQFQISVVEELGIPAKVLNMPSNDLGNPAFKKYDIEAWMPGRGKFGEISSASNCTDFQ 354 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA-DGSVTIPTVLRPYMNN 419 SRR+N++YRD N+ L++ HTLNG+ +A+ R ++A++EN+ + G +++P LR +MN Sbjct: 355 SRRLNTKYRDDNTGKLEYVHTLNGTAMAIPRVIVALVENFYDPSTGKISVPECLREFMNG 414 Query: 420 LAVI 423 I Sbjct: 415 QRYI 418 >gi|67971104|dbj|BAE01894.1| unnamed protein product [Macaca fascicularis] Length = 518 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 128/443 (28%), Positives = 207/443 (46%), Gaps = 20/443 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+W PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDIEWFCACPEEAARALELRKGELRSADLPAIISTWQELRQLREEIRRLEEEKEAVTEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +A + V L+ +++QL L E ++ +PN + Sbjct: 118 RALLANQDSGEVQQDPRYQSLRARGREMRKQLFPLYPREAQLEEQFYLQALKLPNQTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L VG KP+ R H EIGE L ++ R + +SG R L G A Sbjct: 178 VPVGDESQAQVLHV-VGDKPAFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F + G+T ++ P L+R G G P + Sbjct: 237 LLQHGLVNFTFNKLL-RRGFTPMTVPDLLRGAVFEGCGMTPNANPSHIYNIDPARFEDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ RG+ R H F K E+ Sbjct: 296 LAGTAEVGLAGYFMDHAVAFRDLPVRMVCSSTCYRAETNT-GQEPRGLYRVHHFTKVEMF 354 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 355 GVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 414 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +FQSRR++ ++ + L+F HT+N + AV R LIA+LE+ DG Sbjct: 415 RFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATACAVPRLLIALLESNQQKDG 473 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P L+PY+ + H+ Sbjct: 474 SVLVPPALQPYLGTDRITAPTHV 496 >gi|119576769|gb|EAW56365.1| seryl-tRNA synthetase, isoform CRA_a [Homo sapiens] Length = 466 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 110/446 (24%), Positives = 184/446 (41%), Gaps = 50/446 (11%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 IG+ + + D E L + + + I + + E + Sbjct: 63 TIGEKMKKKEPVGDDESVPE-----NVLSFDDLTADALANLKVSQIKKVRLLIDEAILKC 117 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + + +L I G L LE+ Sbjct: 118 DAERIKLEAERFENLREIGNLLHPSVPISNDE--------------------GVLVFLEQ 157 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------TD 224 AL Q+ + GY + P +R E M Q+ +F ++++ D Sbjct: 158 ALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYD 216 Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 ++LI TSE + L+ E + + LP+++ L+ FR E GS GRDTRG+ R HQF K Sbjct: 217 EKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKI 276 Query: 285 ELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 E + S+ E M++ AEE + L + Y +V++ +G L +A K DLE W Sbjct: 277 EQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFP 336 Query: 343 GQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENY 400 G +RE+ SCS C ++Q+RR+ RY ++F H LN + A R + AILENY Sbjct: 337 GSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENY 396 Query: 401 LNADGSVTIPTVLRPYM--NNLAVIK 424 G +T+P L+ +M +I Sbjct: 397 QTEKG-ITVPEKLKEFMPPGLQELIP 421 >gi|114558187|ref|XP_001148216.1| PREDICTED: seryl-tRNA synthetase isoform 3 [Pan troglodytes] Length = 466 Score = 267 bits (681), Expect = 4e-69, Method: Composition-based stats. Identities = 110/446 (24%), Positives = 184/446 (41%), Gaps = 50/446 (11%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 IG+ + + D E L + + + I + + E + Sbjct: 63 TIGEKMKKKEPVGDDESVPE-----NVLSFDDLTADALANLKVSQIKKVRLLIDEAILKC 117 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + + +L I G L LE+ Sbjct: 118 DAERIKLEAERFENLREIGNLLHPSVPISNDE--------------------GVLVFLEQ 157 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------TD 224 AL Q+ + GY + P +R E M Q+ +F ++++ D Sbjct: 158 ALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYD 216 Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 ++LI TSE + L+ E + + LP+++ L+ FR E GS GRDTRG+ R HQF K Sbjct: 217 EKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKI 276 Query: 285 ELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 E + S+ E M++ AEE + L + Y +V++ +G L +A K DLE W Sbjct: 277 EQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFP 336 Query: 343 GQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENY 400 G +RE+ SCS C ++Q+RR+ RY ++F H LN + A R + AILENY Sbjct: 337 GSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENY 396 Query: 401 LNADGSVTIPTVLRPYM--NNLAVIK 424 G +T+P L+ +M +I Sbjct: 397 QTEKG-ITVPEKLKEFMPPGLQELIP 421 >gi|242783989|ref|XP_002480296.1| seryl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] gi|218720443|gb|EED19862.1| seryl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] Length = 738 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 116/484 (23%), Positives = 203/484 (41%), Gaps = 61/484 (12%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 D++ IR++ + R+ + I L + + L + + + R + +IG Sbjct: 256 DVKLIREHADLFARNCVDRNYAAYQDYPHRIKELYAETKTLEEALLNPRRKIKELEKEIG 315 Query: 60 ----------QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + EG + AL+ E LK+ + + + ++KL +PN+ Sbjct: 316 RVASSRVSSQELNGEGKQQALAALRQEAQRLKKGSQETLLRKESLENEIQKLALSLPNLT 375 Query: 110 LEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM----DFDRATKLSGARFS 165 E P+G I + S ++ + +G DF + +G + Sbjct: 376 SREAPVGDDPRVVGYINYNPENSSTWLEQKQPYRSHVEIGTTLELLDFTSSATSTGWGWY 435 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 LT A LE+AL Q+ +D+ + G+ V+ P +V G P+ ++ Sbjct: 436 FLTNEGALLEQALIQYSMDVAL-KRGWKAVAPPSIVYSYIQEACGYQPRDQNNEQQIWHI 494 Query: 225 ----------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 R L T+E+ L +Y+ I+ LPL+F + +R+EAG+ G DT+G Sbjct: 495 EQSEKDKAKPQRSLAGTAEIPLAAMYAGRDIDESLLPLKFVGTSRCYRAEAGARGVDTKG 554 Query: 275 MLRQHQFWKCELVSITREEDS-------------FTEHERMLSCAEEILKRLDLHYRVVS 321 + R H+F K EL + S + +L EIL L+L R++ Sbjct: 555 LYRVHEFTKVELFGWSNNPRSDESDPLFVNCVPLNDLFDELLQIQVEILTALNLPCRILE 614 Query: 322 LCTGDLGFSACKTYDLEVWLAGQNL------------------YREISSCSTCGNFQSRR 363 + T DLG SA + D+E + + E++S S C ++QSRR Sbjct: 615 MPTNDLGASATRKRDIEALFPSRLRAIESSGSAENKGYDLETGWGEVTSASICTDYQSRR 674 Query: 364 MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS-VTIPTVLRPYMNNLAV 422 + +R R+ + ++ T+NG+ VAV R L AILEN + + V IP LR +M + Sbjct: 675 LGTRIRNNQDQKSRYPLTVNGTAVAVPRVLAAILENGWDEERQVVVIPESLRQWMGGMET 734 Query: 423 IKKE 426 I ++ Sbjct: 735 IGRK 738 >gi|70941484|ref|XP_741024.1| seryl-tRNA synthetase [Plasmodium chabaudi chabaudi] gi|56519139|emb|CAH78580.1| seryl-tRNA synthetase, putative [Plasmodium chabaudi chabaudi] Length = 519 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 129/519 (24%), Positives = 220/519 (42%), Gaps = 112/519 (21%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NPE + + K R + + ++ DEK R I K+E+++ N + Sbjct: 3 LDINLFRTEKGGNPEKIKESEKNRFNDVSNVDKVIEYDEKWRKSIFKLEELKKNINLINK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 IG E + V+ LK ++ ++KE++P+++ EE + ++ + N+ +V I Sbjct: 63 TIGNKKKEDKNANVEDLKQKSLSMKEEIPLIQNEEKHLLKQRNTYLAKVGNILSSKVVIN 122 Query: 117 TSANENILIRSVGKKPSAIHLSRE------------------------------------ 140 N ++R+ G+ + E Sbjct: 123 NDEEHNKVVRTWGECKNYEPTDLEKSDTTKGDTPNTKREVGNNNDGQNKVNIISEIKKKY 182 Query: 141 --HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 H+++ +G ++F + ++G R LTG L A+ Q+ I+ YT V P Sbjct: 183 YYHYDLLRKIGGVNFKKGVLVAGHRGYYLTGAGFLLNNAIMQYAINF-LVNKKYTPVYPP 241 Query: 199 LLVRDEAMYGTGQIPKFADDMFCT----------------------------TDGRWLIP 230 ++ M ++ F + ++ D +LI Sbjct: 242 FFMKKTIMEECAELDDFEETLYKISSSSVASAEDPKITANNNSNNISNEKSNRDDLFLIA 301 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 TSE L L+ E +ES+ LPL++ ++ FR EAG+ G+D RG+LR HQF K E I+ Sbjct: 302 TSEQPLCALHRDETLESRYLPLKYVGISSCFRKEAGAHGKDIRGILRVHQFDKVEQFCIS 361 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + S+ HE M+ EE + L++ Y++V++ +G L +A YD+E + YRE+ Sbjct: 362 LPQTSYKLHEEMIKTCEEFYQSLNIPYKIVNIVSGALNNAAALKYDIEGYFPSSGQYREL 421 Query: 351 SSCSTCGNFQSRRMNSRY--------------RDPNSKSLK------------------- 377 SCS C ++QS +N RY +D N ++ K Sbjct: 422 VSCSNCTDYQSINLNIRYTDSNIKIAGITKSSKDKNDENTKDETKDEYVDSEYEKFNHDF 481 Query: 378 ------FTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 + H LNG+ VA R L +LENY N +G + +P Sbjct: 482 PVENKNYVHLLNGTMVAGQRFLCCLLENYQNGEG-IMVP 519 >gi|325066243|ref|ZP_08124916.1| seryl-tRNA synthetase [Actinomyces oris K20] Length = 300 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 118/291 (40%), Positives = 170/291 (58%), Gaps = 5/291 (1%) Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 +H IGE L ++D R K+SGARF L G LE AL +D HG+T + Sbjct: 9 FEPADHLAIGEGLDIIDTRRGAKVSGARFYYLKGWGMRLELALMAAALDA-AVAHGFTPM 67 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 + P LV + M GTG + +D+++ D +L TSEV+L ++ EI++ + P R+ Sbjct: 68 TTPTLVTPQVMGGTGFLGAHSDEIYYLPADDLYLTGTSEVALAGYHADEILDLSAGPKRY 127 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 + +R EAG+AG+DTRG++R HQF K E+ S R ED+ EH R+L+ EE+L ++ Sbjct: 128 MGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEDAEAEHARLLAMEEEMLALVE 187 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK 374 L YRV+ GDLG SA + +D E WL Q + E++S S C +Q+RR+ R R Sbjct: 188 LPYRVIDTAAGDLGSSAARKFDCEAWLPTQQRWMEVTSTSNCTTYQARRLAVRERREGGT 247 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 S TLNG+ +A R ++AILEN+ ADGSV +P LRPY+ L VI+ Sbjct: 248 SP--VATLNGT-LATTRWMVAILENHQQADGSVRVPAGLRPYLGGLEVIEP 295 >gi|156847729|ref|XP_001646748.1| hypothetical protein Kpol_1023p59 [Vanderwaltozyma polyspora DSM 70294] gi|156117428|gb|EDO18890.1| hypothetical protein Kpol_1023p59 [Vanderwaltozyma polyspora DSM 70294] Length = 477 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 115/383 (30%), Positives = 195/383 (50%), Gaps = 16/383 (4%) Query: 52 NSNS------AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 NS S +I I +++ ++ +LK + + SS+ S + Sbjct: 100 NSISLVQVNRKKIENLIKSDKN-NLNSYLDQLKSLKTNFTEYSNQLKLLKSSIDDFCSSL 158 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 PN+ E PI I+ K R+H +I GL+DF A+ +SG + Sbjct: 159 PNLIHETTPISNPQ---IVHWINPKDNYTNDPDRDHVKIMVDKGLIDFKTASAISGNSWY 215 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD- 224 L G A LE AL F I+ +G+ P + R+E + G P+ ++ Sbjct: 216 YLLGRGAQLEHALVSFAIE-QAMANGFELCFPPTIARNEVIDACGFRPRDMNNEQQIYHI 274 Query: 225 ---GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 LI T+E++L L +++++ P + ++ SFR+EAG+ GRDT+G+ R H+F Sbjct: 275 EDMQSGLIATAEITLAGLGINKVLDLTKGPKKLVGVSRSFRAEAGARGRDTKGLYRVHEF 334 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K EL + DS E + + +++ L L +++++ DLG A K YD+E W+ Sbjct: 335 TKVELFCWAKPADSERLLEDLKNFQVDLVTSLGLSAKLLNMPANDLGAPAYKKYDIEAWM 394 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 G+ + EI+S S C +FQSRRMN++Y++ + SL++ HTLNG+ +A+ R ++AI+EN+ Sbjct: 395 PGRGSFGEITSTSNCTDFQSRRMNTKYKNDTTNSLEYVHTLNGTAMAIPRIILAIVENFY 454 Query: 402 NAD-GSVTIPTVLRPYMNNLAVI 423 N D + +P VL+ YM ++ I Sbjct: 455 NPDTNLIEVPKVLQKYMGGISQI 477 >gi|254579905|ref|XP_002495938.1| ZYRO0C06622p [Zygosaccharomyces rouxii] gi|238938829|emb|CAR27005.1| ZYRO0C06622p [Zygosaccharomyces rouxii] Length = 443 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 125/432 (28%), Positives = 222/432 (51%), Gaps = 20/432 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSL------DEKNRILIKKIEDIRARRNSNSA 56 D++ + ++ ++ KR + SE + L E+ L K I ++++R S Sbjct: 21 DVKGVIRDLNEHQDSIVKRQIVNGSELLARLQCLRSQYEEANQLDKNIAQLQSKRKSLEQ 80 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + + + SL L + K + L + ++ ++ +PN+ + VP Sbjct: 81 SL-----KKDKSLAKELVSGLKQCKLEFQELNSKVSTRREEIQDVLQNLPNLIHKSVPDE 135 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + I K + +R+H +I G++DF A+ ++G + L G A LE Sbjct: 136 SPE---IFHWIRPKSSYDVDANRDHVQIMVNKGMVDFQTASNVTGNSWYYLIGKGAQLEH 192 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTS 232 AL F ++ S+ G+ P +VR+E + G P+ ++ + LI T+ Sbjct: 193 ALVSFALNR-ASKAGFQFCIPPSIVRNEIIDACGFRPRDMNNEQQIYHLQDTNQGLIATA 251 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E++L ++++++ P++ + SFR+EAG+ G+DTRG+ R H+F K EL ++ Sbjct: 252 EIALAGYGANKVMDLSQGPIQLVGTSRSFRAEAGARGKDTRGLYRVHEFTKVELFCWSKP 311 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 EDS E+M S EI+ L L +V+++ DLG AC+ +D+E W+ G+ + EI+S Sbjct: 312 EDSDQILEKMRSLQIEIVDSLGLSAKVLNMPANDLGAPACQKFDIEAWMPGRGDFGEITS 371 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA-DGSVTIPT 411 S C ++QSRRMN++Y+D ++ + HTLNG+ +AV R ++AI+EN N D ++ IP Sbjct: 372 TSNCLDYQSRRMNTKYKDNDTGKFGYVHTLNGTAMAVPRVILAIVENGYNPVDDTIRIPE 431 Query: 412 VLRPYMNNLAVI 423 LR +MN A I Sbjct: 432 CLREFMNGQAYI 443 >gi|47224865|emb|CAG06435.1| unnamed protein product [Tetraodon nigroviridis] Length = 512 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 117/439 (26%), Positives = 208/439 (47%), Gaps = 20/439 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSL---DEKNRILIKKIEDIRARRNSNSAQI 58 LD++ + + + + ++ R + + + + + ++ + + +I + ++ S + Sbjct: 59 LDMRIVCEETDKVISNVENRKGDLRGDDVRKMVCVWQELQAVRTEISSLEEQKEQISNMV 118 Query: 59 GQAI----AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + + L + + ++ +L L +E E+ +PN +VP Sbjct: 119 KALVVTLLSILQLPEYNQALLKGREIRSRLNQLHLKETELDQEHYGRALRLPNTTHPDVP 178 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 +G + ++ VG KP R H E+GEALGL+ +SG R L G A L Sbjct: 179 VGDESQARVVEL-VGHKPEFDFKPRGHVELGEALGLLRQRHLAHVSGHRSYYLRGAGARL 237 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLI 229 + AL F +D G+ + P +++ G G P + L Sbjct: 238 QTALQNFALDT-LQGKGFIPLVVPDMLKGAVFEGCGMQPNAHRSQVYSLDPARFPDLNLA 296 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 T EV + + + K LP+R + +R+E + GR+ G+ R H F K E+ + Sbjct: 297 GTGEVGVAGFFMDHAVNWKDLPVRTACSSTCYRAETDT-GREAWGLYRVHHFNKVEMFGV 355 Query: 290 TREE---DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 T +E +S + +S +E+ L+LH RV+ + T +LG A + YD+E W+ G+N Sbjct: 356 TADETGAESAQLLDEFVSLQKEMFTALELHCRVLDMPTQELGPPAHRKYDIEAWMPGRNS 415 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 Y EISS S C ++QSRR+N Y + + SL++THT+N + A+ R +IAILE + Sbjct: 416 YGEISSASNCTDYQSRRLNILYEEEDG-SLQYTHTVNATACAIPRMIIAILETHQTKVRH 474 Query: 407 VTIPTVLRPYMNNLAVIKK 425 + +PT L+PY+ L VI+K Sbjct: 475 IRVPTALQPYL-GLEVIEK 492 >gi|71004692|ref|XP_757012.1| hypothetical protein UM00865.1 [Ustilago maydis 521] gi|46096706|gb|EAK81939.1| hypothetical protein UM00865.1 [Ustilago maydis 521] Length = 440 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 123/411 (29%), Positives = 200/411 (48%), Gaps = 20/411 (4%) Query: 1 MLDIQWIR----QNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 M+D+ ++ NP+ + + KKR+ + + +L+L + L K ++ R N+ Sbjct: 1 MIDLLLLQPDKGGNPQLVKDSQKKRNASEELVDEVLALYKNWVSLQKDLDVARRDVNAVQ 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 A+I + D + L ++ L+ +K I N+ ++VPI Sbjct: 61 AEITKLRKA--KENADEQMAKKKELDAKVNQLKPTVVAAEQEMKTKAMQIGNIVGDKVPI 118 Query: 116 GTSANENILIRSVGK-----KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + ++N +R + H E+ L L D +R TK+SG R LTG Sbjct: 119 SNTEDDNAELRKWHPDGPNAQVEKKEGILSHHEVMYRLELFDTERGTKISGHRGFFLTGD 178 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRW 227 L +AL + +D + Y ++ P ++R E M T Q+ +F ++++ T D ++ Sbjct: 179 GVDLNQALINYGLDF-LRKKDYKKIMTPFMMRKEVMAKTAQLDQFDEELYKVTGDEDDKY 237 Query: 228 LIPTSEVSLTNLYSHEIIESK--SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 LI TSE ++ L+S E+ LP+R+ + FR EAGS G+DT G+ R HQF K E Sbjct: 238 LIATSEQPISALHSDEVFTEPAKQLPIRYAGYSTCFRKEAGSHGKDTWGIFRVHQFEKVE 297 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 IT S+ E+ML+ +EE + L L Y VV++ +G L +A YDLE W Q Sbjct: 298 QFCITDPASSWDMLEQMLANSEEFYQSLQLPYHVVAIVSGALNNAAAMKYDLEAWFPFQG 357 Query: 346 LYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLNGSGVAVGRCLI 394 Y+E+ SCS C ++QSRR++ R ++ P F H LN S + GR L Sbjct: 358 EYKELVSCSNCTDYQSRRLDVRCGFKKPGDTKQTFVHMLNESALLRGRELA 408 >gi|224538465|ref|ZP_03679004.1| hypothetical protein BACCELL_03359 [Bacteroides cellulosilyticus DSM 14838] gi|224519933|gb|EEF89038.1| hypothetical protein BACCELL_03359 [Bacteroides cellulosilyticus DSM 14838] Length = 272 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 112/275 (40%), Positives = 158/275 (57%), Gaps = 5/275 (1%) Query: 150 LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 ++DFD K++GA F V G A L+RAL F +D + GY E+ P +V + YGT Sbjct: 1 MIDFDLGVKITGAGFPVYKGKGAQLQRALINFFLDE-ARKAGYLEIMPPTVVNAASGYGT 59 Query: 210 GQIPKFADDM-FCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 GQ+P M C D +LIPT+EV +TN+Y I+E K LP++ FR EAGS Sbjct: 60 GQLPDKEGQMYHCEVDDLYLIPTAEVPVTNIYRDVILEEKQLPIKNCAYTQCFRREAGSY 119 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 G+D RG+ R H+F K ELV I + E S H+ ML E +L++L+L YR++ LC GD+ Sbjct: 120 GKDVRGLNRLHEFSKVELVRIDKPEHSRQSHKEMLDHVEGLLQKLELPYRILRLCGGDMS 179 Query: 329 FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVA 388 F+A +D EV+ Q + E+SS S +Q+ R+ RYR K + HTLNGS +A Sbjct: 180 FTAALCFDFEVYSEAQKRWLEVSSVSNFDTYQANRLKCRYR-SGEKKTELCHTLNGSALA 238 Query: 389 VGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 + R + A+LEN +G + IP L PY +I Sbjct: 239 LPRIVAALLENNQTPEG-IRIPKALVPYT-GFEMI 271 >gi|241061140|ref|XP_002408067.1| seryl-tRNA synthetase, putative [Ixodes scapularis] gi|215492361|gb|EEC02002.1| seryl-tRNA synthetase, putative [Ixodes scapularis] Length = 446 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 115/450 (25%), Positives = 183/450 (40%), Gaps = 82/450 (18%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD++ R + PE + ++R +P + ++ D R L ++++ +N S Sbjct: 3 LDLELFRADKGGDPEKIRENQRRRFKDPGLVDKVVDADTVWRKLRHQLDNWNKLKNLCSK 62 Query: 57 QIGQAIAEGN---------LSLVDALKNETST----------------LKEQLPILEKEE 91 +IGQ + + S+V L TS + E + ++ Sbjct: 63 EIGQKMKKKEHVGEGDNLPDSVVQGLSELTSEVLQGLTVNQIKRVRVLIDEAIVQCNEDL 122 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 + + + N E + EN +I++ G + S + + M Sbjct: 123 EKHEGVRNDALREMGNWLHESCVVSNDEEENAVIKTHGDVVTRKKYSHVDLIV--MIDGM 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D DR + +G R L Sbjct: 181 DGDRGSVTAGGRGYYLMVVGKGG------------------------------------- 203 Query: 212 IPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRD 271 D ++LI TSE + + E + ++LPLR+ L+ FR E GS GRD Sbjct: 204 --------DGGVDEKYLIATSEQPIAAFHRDEWLSPEALPLRYAGLSSCFRQEVGSHGRD 255 Query: 272 TRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 TRG+ R HQF K E IT S+ + M+ AEE ++L + YRVVS+ +G L Sbjct: 256 TRGIFRVHQFEKVEQFCITSPHDNKSWEMFDEMIGNAEEFCQKLGIPYRVVSIVSGALNN 315 Query: 330 SACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS--LKFTHTLNGSGV 387 +A K +DLE W +RE+ SCS C ++QSRR+ RY + ++ H LN + Sbjct: 316 AAAKKHDLEAWFPASGAFRELVSCSNCLDYQSRRLLIRYGQTKKMNAQTEYVHMLNATMC 375 Query: 388 AVGRCLIAILENYLNADGSVTIPTVLRPYM 417 AV R + AILEN+ G V +P LRP+M Sbjct: 376 AVTRVICAILENHQTETG-VVVPEALRPFM 404 >gi|301595146|ref|ZP_07240154.1| seryl-tRNA synthetase [Acinetobacter baumannii AB059] Length = 334 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 135/336 (40%), Positives = 200/336 (59%), Gaps = 4/336 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ L KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 1 MIDPKLLRNNIEVVNAGLAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 G + + +++ E E+ + +++ IPN+P E VP G N Sbjct: 61 IKKSGG--DASEIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ I G ++H ++GE +G ++F+ ATKL+G+RFSVL G LA L+RAL Q Sbjct: 119 DNVEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLTN 238 FM+D HT ++GYTE P LV +++ GTGQ+PKF +D+F +LIPT+EV +TN Sbjct: 179 FMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTN 238 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 EII++ LPL++ P FRSEAGS GRDTRG++RQHQF K E+V I + E S Sbjct: 239 FVRDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQA 298 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 E + + AE IL+ L L YR + LC GD+GF A KT Sbjct: 299 LEELTAHAEGILQALGLPYRKILLCGGDMGFGATKT 334 >gi|299756138|ref|XP_001829122.2| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130] gi|298411539|gb|EAU92757.2| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130] Length = 535 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 125/438 (28%), Positives = 213/438 (48%), Gaps = 29/438 (6%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD + I +N + + R + L + + + K++ R ++ +QI Sbjct: 88 LDYKSIAENVDAKIHNAQIRAAPIPQEDIRTVSKLYNEAKEVSKQLNFQRHQQ----SQI 143 Query: 59 GQAIAEG-NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 G+ I + N K E + LK+Q+ L+ ++ + + IPN + P+G Sbjct: 144 GERIRKAANEEERAKAKQEAAALKQQVHELQASLQQLEQTYQAYALHIPNDTHPQSPVGP 203 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + + R+H I + L L+D + ++G+ + L A LE A Sbjct: 204 EPSA-VTLEVCRPNTEPADPKRDHVAIAKELDLLDLESGATVTGSSWYFLKNEAALLEMA 262 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--------TTDGRWLI 229 L + + + +HG+T V+ P +VR + G P+ T L Sbjct: 263 LSNYSMAVAI-KHGFTPVTTPDVVRSDVAVRCGFQPRDQAASHMYHLTKNHETAPQLILS 321 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 T+E+ L ++++++ + LPL++ + +FR EAG+ DTRG+ R HQF K EL ++ Sbjct: 322 GTAEIPLAGMFANKVYQQAELPLKYVGIGHAFRQEAGARSADTRGLYRVHQFTKVELFAV 381 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T E S E+M EIL+ L+L +RV+ + T +LG SA + YD+E W+ G+ + E Sbjct: 382 TDAEGSEEMMEKMKDIQIEILRDLNLSFRVLDMPTEELGASAYRKYDIEAWMPGRGTWGE 441 Query: 350 ISSCSTCGNFQSRRMNSRYR------DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN- 402 ++S S C ++QSRR++ RYR D L F HTLNG+G A+ R ++A+LEN Sbjct: 442 VTSLSNCTDYQSRRLHIRYRPQLKDKDAGDSRLPFAHTLNGTGAAIPRLIVALLENGARF 501 Query: 403 -ADGSVT---IPTVLRPY 416 DG V +P+VL P+ Sbjct: 502 SEDGKVEKLQLPSVLEPF 519 >gi|218677508|ref|ZP_03525405.1| seryl-tRNA synthetase [Rhizobium etli CIAT 894] Length = 208 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 149/206 (72%), Positives = 171/206 (83%) Query: 214 KFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 +D+F TTDGR+LIPT+EV+LTNL EI++ + LPLRFT L PSFRSEAGSAGRDTR Sbjct: 3 NSKEDLFKTTDGRYLIPTAEVTLTNLVREEILDQEKLPLRFTALTPSFRSEAGSAGRDTR 62 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 GMLRQHQFWKCELVSIT E S EHERM +CAEE+LKRL LH+R ++LCTGD+GF + K Sbjct: 63 GMLRQHQFWKCELVSITDAESSIAEHERMTACAEEVLKRLGLHFRTMTLCTGDMGFGSRK 122 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 TYDLEVWL GQN +REISSCS CG+FQ+RRMN+RYR + KS +F HTLNGSG AVGRCL Sbjct: 123 TYDLEVWLPGQNAFREISSCSVCGDFQARRMNARYRGKDDKSNRFVHTLNGSGTAVGRCL 182 Query: 394 IAILENYLNADGSVTIPTVLRPYMNN 419 IA+LENYLN DGSVTIP VL PYM Sbjct: 183 IAVLENYLNEDGSVTIPDVLLPYMGG 208 >gi|50286899|ref|XP_445879.1| hypothetical protein [Candida glabrata CBS 138] gi|49525185|emb|CAG58798.1| unnamed protein product [Candida glabrata] Length = 451 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 115/436 (26%), Positives = 212/436 (48%), Gaps = 22/436 (5%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLD-------EKNRILIKKIEDIRARRNSNS 55 D++ I ++ ++ +R L Q + + +LD E+ + + KI ++ R + Sbjct: 21 DVKRIIRDIGLYKDSIARRELVGQEQLVGALDGQLAATYERTKDIHAKISAVQTERKALE 80 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 I Q G D + E +LK Q L ++ E S ++ + +PN+ E P Sbjct: 81 FSIRQHKVHG-----DEVLKELRSLKSQFSALAEQLQEANSKIQDICLRLPNLIHESAPD 135 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 + + + + + + + + L+D A+ +SG + L A LE Sbjct: 136 TAPVIDRWINKGLYESFEQQENRDHVYIMTKCKQLLDLASASNISGNSWYYLINEGAQLE 195 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------DGRWLI 229 AL + +D +HG+ P + R E + G P+ ++ + L Sbjct: 196 TALVNYALD-QAEKHGFQRCIPPSIARKEIIDACGFTPRDMNNEKQIYEIEDGNNKLGLT 254 Query: 230 PTSEVSLTNLYSHE--IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 T+E++L + +++ ++ + R ++ S+R+EAG+ G+DT+G+ R H+F K EL Sbjct: 255 ATAEITLAGMNANKILDLDENNPTKRLVGVSRSYRAEAGARGKDTKGLYRVHEFTKVELF 314 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + S E + +++ L L +V+++ DLG A K YD+EVW+ G+ + Sbjct: 315 CWSLPQHSEKVLEDLKEFQVKLISDLGLCAQVLNMPANDLGNPAYKKYDIEVWMPGRGKF 374 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA-DGS 406 E+SS S C +FQSRR+ +RY++ S L++ HTLNG+ +AV R ++AI+EN+ + Sbjct: 375 GEVSSTSNCTDFQSRRLFTRYQNKESSKLEYVHTLNGTAMAVPRMILAIIENFYDPSTNM 434 Query: 407 VTIPTVLRPYMNNLAV 422 VT+P+ L PYMN Sbjct: 435 VTVPSPLIPYMNGKTK 450 >gi|145642031|ref|ZP_01797603.1| seryl-tRNA synthetase [Haemophilus influenzae R3021] gi|145273302|gb|EDK13176.1| seryl-tRNA synthetase [Haemophilus influenzae 22.4-21] Length = 186 Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 102/181 (56%), Positives = 127/181 (70%) Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 I+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I + S E + Sbjct: 6 IDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTG 65 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRM 364 AE++L+ L+L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS +FQ+RRM Sbjct: 66 HAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCSNMWDFQARRM 125 Query: 365 NSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 +R + K + HTLNGSG+AVGR L+A+LENY NADGS+T+P LRPYM L VI Sbjct: 126 QARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELRPYMGGLDVIG 185 Query: 425 K 425 K Sbjct: 186 K 186 >gi|316933996|ref|YP_004108978.1| seryl-tRNA synthetase [Rhodopseudomonas palustris DX-1] gi|315601710|gb|ADU44245.1| seryl-tRNA synthetase [Rhodopseudomonas palustris DX-1] Length = 496 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 130/213 (61%), Positives = 159/213 (74%), Gaps = 4/213 (1%) Query: 214 KFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 D+ LIPT+EVSLTNL I++ K LP+R T L P FR+EAG+AGRDTR Sbjct: 281 DLKDNRPPLGKRLGLIPTAEVSLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTR 340 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 GM+RQHQF K ELVSIT E S EHERML+CAEE+L+RL LHYRV++LCTGD+GF++ K Sbjct: 341 GMIRQHQFTKVELVSITTPEQSKDEHERMLACAEEVLRRLGLHYRVMTLCTGDMGFASQK 400 Query: 334 TYDLEVWLAGQNL---YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVG 390 TYD+EVW+ GQ YREISSCS CG+FQ+RRM++R R P+ K +F HTLNGSG AVG Sbjct: 401 TYDIEVWMPGQGEGGAYREISSCSVCGDFQARRMDARSRGPDGK-PRFVHTLNGSGTAVG 459 Query: 391 RCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 R LIA++ENY DGS+ +P VL+PYM L VI Sbjct: 460 RALIAVIENYQQEDGSIAVPDVLQPYMGGLKVI 492 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 150/242 (61%), Gaps = 2/242 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR NP+ D A +R L P + ++ LDE R ++ E +ARRN+ S +IG Sbjct: 1 MHDIKAIRDNPQAFDAAFTRRGLAPIAGSLIKLDEARRAAVQAAEQAQARRNAASKEIGD 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + +AL E + LK +P L+ E +LKK +S IPN+PL EVP G + Sbjct: 61 AKKAKDNARAEALMAEVTELKTTMPALDAAVKEADEALKKALSEIPNLPLAEVPEGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ G+KPS + H+++GEALG+MDF+ A KLSGARF VL LA LERA+GQ Sbjct: 121 GNVEHHRFGEKPSYSFTPKPHYDLGEALGMMDFEAAAKLSGARFVVLKKGLARLERAIGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--GRWLIPTSEVSLTN 238 F +D+HT +HGYTEV+ PLLV++E M+GT Q+PKF DD F T WL T E+ T+ Sbjct: 181 FFLDVHTGDHGYTEVNPPLLVKEETMFGTAQLPKFEDDQFWTDPRTPDWLETTLELIRTH 240 Query: 239 LY 240 Y Sbjct: 241 AY 242 >gi|213648824|ref|ZP_03378877.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 387 Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 134/331 (40%), Positives = 192/331 (58%), Gaps = 10/331 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDTLLAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T LIPT+ Sbjct: 179 FMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R Sbjct: 239 EVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRP 298 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 EDS E M AE++L+ L L YR + Sbjct: 299 EDSMAALEEMTGHAEKVLQLLGLPYRKIICA 329 >gi|145631509|ref|ZP_01787277.1| seryl-tRNA synthetase [Haemophilus influenzae R3021] gi|144982854|gb|EDJ90371.1| seryl-tRNA synthetase [Haemophilus influenzae R3021] Length = 172 Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 101/172 (58%), Positives = 122/172 (70%) Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 T P FRSEAGS GRDTRG++R HQF K E+V I + S E + AE++L+ L Sbjct: 1 MTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLL 60 Query: 314 DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS 373 +L YR V LCTGD+GF +CKTYDLEVWL QN YREISSCS +FQ+RRM +R + Sbjct: 61 NLPYRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREISSCSNMWDFQARRMQARCKAKGD 120 Query: 374 KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 K + HTLNGSG+AVGR L+A+LENY NADGS+T+P VLRPYM L VI K Sbjct: 121 KKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEVLRPYMGGLDVIGK 172 >gi|170042016|ref|XP_001848739.1| seryl-tRNA synthetase [Culex quinquefasciatus] gi|167865551|gb|EDS28934.1| seryl-tRNA synthetase [Culex quinquefasciatus] Length = 442 Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 102/377 (27%), Positives = 183/377 (48%), Gaps = 9/377 (2%) Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I GN+ LV L N +L E E+ ++ L+ + IPN V Sbjct: 55 IEHRKGVGNIQLVHELNNRLRSLPA--NASEAEKSQLNDQLQAELRKIPNRTHPGVLQHG 112 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + + + E E+ + + + ++ +G + LTG LA LE+A Sbjct: 113 ADPKVVRYYNEKPSLGEGAKVFEFSEMTKKMNIFRMEKLGNFTGHKSYYLTGELAELEQA 172 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM----FCTTDGRWLIPTSE 233 L ++ + + + + ++ P ++ + G + + L TSE Sbjct: 173 LIRYALSKLLARN-FHLITVPDILPARIIESCGMSTHGERNQVYKLNYPHETLCLSGTSE 231 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++L ++ + E LPL+ T ++ FR+E SA + +G+ R HQF K E+ S+ R + Sbjct: 232 MALAGYFAGTVTEESRLPLKLTAVSRCFRAE-TSALHEEKGIYRVHQFTKVEMFSVCRPD 290 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E ++ L +H++++ + +LG A + YD+E W+ G+ +Y EISSC Sbjct: 291 QSEAMLEEFRDIEVDLFDALGVHFQLLDMPACELGAPAYRKYDIEAWMPGRGMYGEISSC 350 Query: 354 STCGNFQSRRMNSRYR-DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C ++Q+RR+ +YR ++ L + HT+NG+ A+ R LIA+LEN+ N D ++TIP Sbjct: 351 SDCTDYQARRLGIQYRSGSDNSQLNYAHTVNGTACAIPRMLIALLENFQNKDYTITIPEP 410 Query: 413 LRPYMNNLAVIKKEHIL 429 LRP+M I ++ +L Sbjct: 411 LRPFMRGKDKISRKKVL 427 >gi|332242520|ref|XP_003270433.1| PREDICTED: LOW QUALITY PROTEIN: seryl-tRNA synthetase, mitochondrial-like [Nomascus leucogenys] Length = 520 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 124/438 (28%), Positives = 201/438 (45%), Gaps = 26/438 (5%) Query: 11 PEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 PE AL+ R E I+S ++ R L ++I + + + + + +A + Sbjct: 67 PEEAAHALELRKGELRSADLPAIISTWQELRQLREQIRSLEEEKAAVTEAVRALLANQDS 126 Query: 68 SLVDALKNETSTLK----------EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 V + + QL +L + + E L+ +PN +VP+G Sbjct: 127 GEVQQVWLDPGAGSIFGPAFLPFPGQLSLLVEAQLEEQFYLQA--LKLPNQTHPDVPVGD 184 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +L VG KP R H EIGE L ++ R + +SG R L G A L+ Sbjct: 185 ESQARVLHV-VGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHG 243 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTS 232 L F + G+T ++ P L+R G G P L T+ Sbjct: 244 LVNFTFNKLL-RRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTA 302 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 EV L + + + LP+R + +R+E + G++ RG+ R H F K E+ +T Sbjct: 303 EVGLAGYFMDHAVAFRDLPVRMVCSSTCYRAETNT-GQEPRGLYRVHHFTKVEMFGVTGP 361 Query: 293 --EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E+S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ + E+ Sbjct: 362 GLEESSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEV 421 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 +S S C +FQSRR++ ++ + L+F HT+N + AV R LIA+LE+ DGSV +P Sbjct: 422 TSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATACAVPRLLIALLESNQQKDGSVLVP 480 Query: 411 TVLRPYMNNLAVIKKEHI 428 L+PY+ + H+ Sbjct: 481 PALQPYLGTDRITAPTHV 498 >gi|255717983|ref|XP_002555272.1| KLTH0G05368p [Lachancea thermotolerans] gi|238936656|emb|CAR24835.1| KLTH0G05368p [Lachancea thermotolerans] Length = 442 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 109/432 (25%), Positives = 208/432 (48%), Gaps = 20/432 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHL------EPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 D++ I E ++K R L + + + + + ++L ++ I+ R Sbjct: 20 DVKGISGRLEAYLHSIKARQLLASPQLSAELQNLPKQENELKLLNQQFARIQTARKDIER 79 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I + + S + ++ LK + + + + +++ +PN+ +VP+ Sbjct: 80 EI-----KEDKSKMLQSRHRLQELKTEAQAVAADLKHMQDKVQETCMSLPNLIHGDVPLT 134 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 +L + R+H +I L+DF A ++G + L A LE+ Sbjct: 135 EPQ---VLQWLSPQSEFRPDPKRDHHDIMVRKELVDFRSAATVTGNSWYYLINDGALLEQ 191 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF---ADDMFCTTDGRW-LIPTS 232 AL + + G+ + P + ++E + G P+ ++ D +W L T+ Sbjct: 192 ALVSYAT-KKARDRGFIMCNPPSIAKNEVIDACGFRPRDMNGEQQIYHLADTQWGLTATA 250 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E++L L +++ + ++ S+R+EAG+ G+DTRG+ R H+F K EL R Sbjct: 251 EIALAGLGIDAVLDLSRGSKKLCGVSRSYRAEAGARGKDTRGLYRVHEFTKVELFCWARP 310 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 +DS E + E+++ L L +V+++ DLG A + YD+EVW+ G+ + EI+S Sbjct: 311 DDSDQMLEELRQFQTELVEELGLPAKVLNMPANDLGAPAYRKYDIEVWMPGRGSFGEITS 370 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA-DGSVTIPT 411 S C +FQSRRMN++++DP + HTLNG+ +AV R ++A++EN+ + + +P Sbjct: 371 TSNCTDFQSRRMNTKFKDPVTGKSSHVHTLNGTAMAVPRVIMALVENFYDPVSNLIAVPA 430 Query: 412 VLRPYMNNLAVI 423 L PYM+ I Sbjct: 431 PLVPYMDGKTHI 442 >gi|149420962|ref|XP_001510792.1| PREDICTED: similar to Solute carrier organic anion transporter family, member 4A1, partial [Ornithorhynchus anatinus] Length = 468 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 109/417 (26%), Positives = 187/417 (44%), Gaps = 43/417 (10%) Query: 41 IKKIEDIRARRNSNSAQIGQAIAEGNLS-----------LVDALKN------ETSTLK-- 81 + +++ +N S IG+ + + +D L + S +K Sbjct: 1 RFRADNLNKLKNLCSKTIGEKMKKKEPVGGEESIPENALKLDDLSADILSGLKVSQIKKV 60 Query: 82 -----EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 E + + E ++ + + + I N+ VPI + + + V + Sbjct: 61 RLLIDEAILKCDGERQKLEAERFESLREIGNLLHPSVPISNDEDADNKVEKVWGDCTVRK 120 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 H ++ + + ++ ++G+R L G L LE+AL Q+ + GYT + Sbjct: 121 K-YSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIY 178 Query: 197 APLLVRDEAMYGTGQIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEI 244 P +R E M Q+ +F ++++ D ++LI TSE + L+ E Sbjct: 179 TPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKADDNSYDEKYLIATSEQPIAALHRDEW 238 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERM 302 + + LP+++ L+ FR E GS GRDTRG+ R HQF K E + S+ + M Sbjct: 239 LRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEM 298 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSR 362 + AEE + L + Y +V++ +G L +A K DLE W G +RE+ SCS C ++Q+R Sbjct: 299 IGTAEEFYQALGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQAR 358 Query: 363 RMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 R+ RY ++F H LN + A R + AILENY G + +P LR +M Sbjct: 359 RLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-IIVPEKLRQFM 414 >gi|326935581|ref|XP_003213848.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like, partial [Meleagris gallopavo] Length = 467 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 109/416 (26%), Positives = 187/416 (44%), Gaps = 43/416 (10%) Query: 42 KKIEDIRARRNSNSAQIGQAIAEGNL-----------SLVDALKN------ETSTLK--- 81 + +++ +N S IG + + +D L + S +K Sbjct: 1 FRADNLNKLKNLCSKTIGDKMKKKEPVGSDESVPESAQNLDELTADVLGGLQVSQIKKVR 60 Query: 82 ----EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 E + + E + + + + I N+ VPI + + + + S Sbjct: 61 LLIDEAILKCDAERVRLEAERFESLREIGNLLHPSVPISNDEDADNKVERIWGDCSCRKK 120 Query: 138 SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 H ++ + + ++ ++G+R L G L LE+AL Q+ + GYT V Sbjct: 121 -YSHVDLVVMVDGYEGEKGAVVAGSRGYFLKGPLVFLEQALIQYALQS-LRAKGYTPVYT 178 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEII 245 P +R E M Q+ +F ++++ D ++LI TSE + L+ E + Sbjct: 179 PFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKAEDSSIDEKYLIATSEQPIAALHRDEWL 238 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERML 303 + + LP+++ L+ FR E GS GRDTRG+ R HQF K E S+ + M+ Sbjct: 239 KPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMI 298 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRR 363 + AEE + L + Y +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR Sbjct: 299 ATAEEFYQSLGIPYHIVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARR 358 Query: 364 MNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + R+ ++F H LN + A R + AILENY +G + +P LR +M Sbjct: 359 LRIRFGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEEG-IVVPERLRDFM 413 >gi|205361469|gb|ACI03613.1| dynein microtubule-binding domain (22:19) fused to seryl-tRNA synthase-dimer [synthetic construct] Length = 532 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 126/358 (35%), Positives = 191/358 (53%), Gaps = 8/358 (2%) Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + L+ +L LE + + L+ L+ +P P P+G + R VG Sbjct: 172 ADMLKRVEPLRNELQKLEDDAKDNQQKLEALLLQVPLPPWPGAPVGGEEANREIKR-VGG 230 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 P +H + E G + R +++SG+R L G LA E AL +F +D Sbjct: 231 PPEFSFPPLDHVALMEKNGWWEP-RISQVSGSRSYALKGDLALYELALLRFAMDFMA-RR 288 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKS 249 G+ ++ P R++A GTG P + D ++ +L T+EV L L+S EI+ ++ Sbjct: 289 GFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNALHSGEILPYEA 348 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAE 307 LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + +L AE Sbjct: 349 LPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAE 408 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 EIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+RR N R Sbjct: 409 EILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLR 468 Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 YRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM V++ Sbjct: 469 YRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKEVLEP 524 Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 24/36 (66%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEK 36 M+D++ +RQ PE A++++ + E +L++D++ Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDKQ 36 >gi|1128947|gb|AAA83842.1| ORF X; putative [Escherichia coli] Length = 180 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 103/179 (57%), Positives = 126/179 (70%) Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 I+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R EDS E M Sbjct: 1 IDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTG 60 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRM 364 AE++L+ L L YR + LCTGD+GF ACKTYDLEVW+ QN YREISSCS +FQ+RRM Sbjct: 61 HAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRM 120 Query: 365 NSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 +R R + K + HTLNGSG+AVGR L+A++ENY ADG + +P VLRPYMN L I Sbjct: 121 QARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYI 179 >gi|215261312|pdb|3ERR|A Chain A, Microtubule Binding Domain From Mouse Cytoplasmic Dynein As A Fusion With Seryl-Trna Synthetase gi|215261313|pdb|3ERR|B Chain B, Microtubule Binding Domain From Mouse Cytoplasmic Dynein As A Fusion With Seryl-Trna Synthetase gi|205361467|gb|ACI03612.1| dynein microtubule-binding domain (26:19) fused to seryl-tRNA synthase-dimer [synthetic construct] Length = 536 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 126/358 (35%), Positives = 191/358 (53%), Gaps = 8/358 (2%) Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + L+ +L LE + + L+ L+ +P P P+G + R VG Sbjct: 176 ADMLKRVEPLRNELQKLEDDAKDNQQKLEALLLQVPLPPWPGAPVGGEEANREIKR-VGG 234 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 P +H + E G + R +++SG+R L G LA E AL +F +D Sbjct: 235 PPEFSFPPLDHVALMEKNGWWEP-RISQVSGSRSYALKGDLALYELALLRFAMDFMA-RR 292 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKS 249 G+ ++ P R++A GTG P + D ++ +L T+EV L L+S EI+ ++ Sbjct: 293 GFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNALHSGEILPYEA 352 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAE 307 LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + +L AE Sbjct: 353 LPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAE 412 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 EIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+RR N R Sbjct: 413 EILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLR 472 Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 YRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM V++ Sbjct: 473 YRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKEVLEP 528 Score = 43.2 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 41/87 (47%), Gaps = 16/87 (18%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +RQ PE A++++ + E +L++D E + ++ + + Q Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVD----------EQLHKQQEVIADK--Q 48 Query: 61 AIAEGNLSLVD----ALKNETSTLKEQ 83 + +L V+ +N ++K+Q Sbjct: 49 MSVKEDLDKVEPAVIEAQNAVKSIKKQ 75 >gi|224085041|ref|XP_002196082.1| PREDICTED: seryl-tRNA synthetase [Taeniopygia guttata] Length = 492 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 112/419 (26%), Positives = 187/419 (44%), Gaps = 43/419 (10%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNL-----------SLVDALKN------ETSTLK 81 + +++ +N S IG + + +D L + S +K Sbjct: 6 QCRFRADNLNKLKNLCSKTIGDKMKKKEPVGTDESVPESAQNLDELTADILGCLQVSQIK 65 Query: 82 -------EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E + + E + + + + I N+ VPI + + + V S Sbjct: 66 KVRLLIDEAILECDSERLRLEAERFESLREIGNLLHPSVPISNDEDVDNKVERVWGDCSC 125 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 H ++ + + ++ ++G+R L G L LE+AL Q+ + GYT Sbjct: 126 RKK-YSHVDLVVMVDGYEGEKGAVVAGSRGYFLKGPLVFLEQALIQYALQS-LRARGYTP 183 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSH 242 V P +R E M Q+ +F ++++ D ++LI TSE + L+ Sbjct: 184 VYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSERAEDSSIDEKYLIATSEQPIAALHRD 243 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHE 300 E + + LPL++ L+ FR E GS GRDTRG+ R HQF K E + S+ E Sbjct: 244 EWLRPEDLPLKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEIFE 303 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 M++ AEE + L + Y +V++ +G L +A K DLE W G +RE+ SCS C ++Q Sbjct: 304 EMMATAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQ 363 Query: 361 SRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +RR+ RY ++F H LN + A R + AILEN+ +G + IP L+ +M Sbjct: 364 ARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENHQTPEG-IRIPEKLQNFM 421 >gi|302418949|ref|XP_003007305.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261352956|gb|EEY15384.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 500 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 133/456 (29%), Positives = 215/456 (47%), Gaps = 36/456 (7%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ IR+N + R+ SE I ++ ++ + + +R R N I Sbjct: 43 LDIKHIRENANLHAENCRNRNYGAHSENPARIAAIFKQWQDHQRSSRSLRERSNQVRRCI 102 Query: 59 GQ---AIAEGNLSLV-----DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 AEG + + D L E LK++L +EK E + ++ L S +PN+ Sbjct: 103 ANPTVRDAEGTANDISSLTKDQLLEEARRLKKELSGVEKLEARLVEEMETLASTVPNLSS 162 Query: 111 EEVPIGTSAN--ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLT 168 E P+G I + + K S+ + R H IG LG++DF A+ SG F L Sbjct: 163 PESPVGEEPTLLSQINEQHLEKASSSDRVWRSHVHIGAELGILDFASASSTSGWGFYYLL 222 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA------------ 216 A LE+AL Q+ + + HG+ +V+ P +V G P+ Sbjct: 223 DEAAQLEQALVQYALAVAV-RHGWRQVAPPSMVYSHIANACGYQPRDQNDEQQIYSIARP 281 Query: 217 -DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 +D+ L TSE+ L + ++ + LP + ++ +R+EAG+ G T+G+ Sbjct: 282 AEDVERDKPELVLAGTSEIPLAGMKANSTVSESDLPAKRVAVSRCYRAEAGARGASTKGL 341 Query: 276 LRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 R H+F K EL + T +D+ + ML E+L+ L L RV+ + T +LG SA + Sbjct: 342 YRVHEFTKVELFAWTPPNFDDTTEIFDEMLDMQTELLESLGLSCRVLEMPTTELGASAFR 401 Query: 334 TYDLEVWLAG----QNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAV 389 D+E + Q + E++S S C ++Q+RR+ +R R L F T+NG+ +AV Sbjct: 402 KIDIEAFFPSRQEQQGGWGEVTSASICTDYQTRRLATRARI--DGQLTFPWTVNGTALAV 459 Query: 390 GRCLIAILENYLN-ADGSVTIPTVLRPYMNNLAVIK 424 R L A+LEN N + +V IP LRP+M+ VI Sbjct: 460 PRVLAALLENGWNEEEKTVHIPECLRPWMDGKTVIT 495 >gi|254566207|ref|XP_002490214.1| Probable mitochondrial seryl-tRNA synthetase [Pichia pastoris GS115] gi|238030010|emb|CAY67933.1| Probable mitochondrial seryl-tRNA synthetase [Pichia pastoris GS115] gi|328350611|emb|CCA37011.1| seryl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 451 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 116/435 (26%), Positives = 205/435 (47%), Gaps = 21/435 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEP----QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 D + I Q + + +R + + IL L ++ +++ R+ ++Q+ Sbjct: 22 DFKSIVQLQDEYLNSCSRRIVNEQTLRNASSILDRYNDFVKLDVQLRNLKNERSKLNSQV 81 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 L E LK ++ L +E SL ++ +PN+ V Sbjct: 82 KNLGPN------QYLLEELGLLKVRIKNLSSHYNETQESLYQMAESLPNLIHPSVSDKEE 135 Query: 119 ---ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 L + +H I E L L +F A+++SG F L A LE Sbjct: 136 IVSTINCSLNDIEELSTRKPDPTFDHKSILEDLNLANFQTASRVSGTSFYYLLNDGALLE 195 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPT 231 +AL Q+ + ++GY V P +V++E Y G P+ ++ + + L T Sbjct: 196 QALIQYALKF-ARQNGYEMVIPPSVVKNEVTYACGFKPRDQNNEQQVYELANSNQCLNGT 254 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +E+ L L+ ++ LP R +A SFR+EAG+ G+DT+G+ R H+F K EL T Sbjct: 255 AEIPLAALWIDAEFSAQDLPKRQCAIARSFRAEAGAHGKDTKGLYRVHEFSKVELFQWTE 314 Query: 292 EE--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + S + +L+ L L +V+++ + DLG A + +D+E ++ G+ + E Sbjct: 315 NDVNTSSKVLKDILNLQIGFFTSLGLKCKVMNMPSNDLGSPAYQKFDIECFMPGRGKFGE 374 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA-DGSVT 408 +SS S C ++Q+RR+N +YR+ + L+F HTLNG+ AV R ++AI+EN+ + ++ Sbjct: 375 LSSTSNCLDYQARRLNIKYRNSTTNKLQFVHTLNGTMCAVPRTIVAIIENFYDPLSKTIE 434 Query: 409 IPTVLRPYMNNLAVI 423 IP LR +M++ I Sbjct: 435 IPAPLRSFMDDKERI 449 >gi|330933004|ref|XP_003304005.1| hypothetical protein PTT_16417 [Pyrenophora teres f. teres 0-1] gi|311319652|gb|EFQ87890.1| hypothetical protein PTT_16417 [Pyrenophora teres f. teres 0-1] Length = 593 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 111/402 (27%), Positives = 184/402 (45%), Gaps = 19/402 (4%) Query: 38 RILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSS 97 R ++ N+ IGQ N L E L+ + + E E + Sbjct: 177 RRTQYDATQYGSKINTVQKSIGQKKK--NKEDATELLEEKKKLEAEKKEKDAEAAEKLAK 234 Query: 98 LKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG---EALGLMDFD 154 L + N ++VP+ + + N + ++ + + L D + Sbjct: 235 LHAKAKSVGNYVYKDVPVSDNEDNNAVQKTWAPEGRKAEFKADGIPHHGVLARLNGYDPE 294 Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 R TK+ G R LTG+ L +AL + ++ G+T P + + M T Q+ Sbjct: 295 RGTKIVGHRGYCLTGYGVFLNQALINYGLEF-LFSKGFTPNQPPFFMLRDQMAKTAQLSD 353 Query: 215 FADDMFCTTD-------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 F ++++ T+ ++LI TSE ++ L+S E + S LP+++ + +FR EAGS Sbjct: 354 FDEELYKVTESKDKPETDKYLIATSEQPISALHSEEWLHSDQLPIKYAGYSTNFRKEAGS 413 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 G+D G+ R HQF K E +T E S+ + ML+ +EE + L L Y+VV++ +G L Sbjct: 414 HGKDAWGIFRIHQFEKVEQFLLTHPEKSWEAFDEMLANSEEFYQSLGLPYQVVAIVSGAL 473 Query: 328 GFSACKTYDLEVWLA--GQNLYREISSCSTCGNFQSRRMNSR--YRDPNSKSLKFTHTLN 383 +A DLE W G Y+E+ S S C ++Q+R + R + N+ ++ H LN Sbjct: 474 NNAASMKRDLEAWFPVTGGGEYKELVSISNCTDYQTRELEIRHGIKKLNATRKEYVHALN 533 Query: 384 GSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL-AVIK 424 G+ A R L ILENY +G T+P VLR Y+ + Sbjct: 534 GTLCATERTLCCILENYQTPEG-FTVPEVLRKYIPGQPEFLP 574 >gi|156064361|ref|XP_001598102.1| hypothetical protein SS1G_00188 [Sclerotinia sclerotiorum 1980] gi|154691050|gb|EDN90788.1| hypothetical protein SS1G_00188 [Sclerotinia sclerotiorum 1980 UF-70] Length = 598 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 111/438 (25%), Positives = 187/438 (42%), Gaps = 67/438 (15%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD+ NP+ + + ++R+ + + +++L E +R + ++ N Sbjct: 167 MLDVNDFITERGGNPQAIKDSQRRRYAPEEAVDEVIALYEDHRKTQYAATQVNSKINET- 225 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q + L + + L+++ E LKK IS I N+ E VP+ Sbjct: 226 -QKAIGAKKKAKEDATELLQQKADLEKEKKTWLDAAAEKEIILKKKISTIGNIVHESVPV 284 Query: 116 GTSANENILIRSVGKK--PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + N L+R+ + H E+ L D +R K+ Sbjct: 285 NNDEDHNELLRTWAPEGVTVEKKDVLSHHEVLTRLDGYDPERGVKV-------------- 330 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWL 228 T Q+ +F ++++ + ++L Sbjct: 331 -----------------------------------TAQLEQFDEELYKVVDGDAQNDKYL 355 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 I TSE ++ ++ E + +K +P+R+ + +R EAGS GRD G+ R HQF K E Sbjct: 356 IATSEQPISAFHADEWLTAKDVPIRYAGFSSCYRREAGSHGRDAWGIFRVHQFEKIEQFV 415 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 +T E S+ E +RM+S +EE + L + YRVV++ +G L +A K YDLE W Q Y+ Sbjct: 416 LTDPEKSWEEFDRMISFSEEFYQSLGVPYRVVAIVSGALNNAAAKKYDLEAWFPFQGEYK 475 Query: 349 EISSCSTCGNFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 E+ SCS C ++QSR + RY + K+ H LN + A R L +LEN+ +G Sbjct: 476 ELVSCSNCTDYQSRALEIRYGTKTQTEIRKKYVHALNSTLCATERALCCLLENFQTEEG- 534 Query: 407 VTIPTVLRPYMNNL-AVI 423 +P LR Y+ I Sbjct: 535 FNVPEPLRKYLPGAPEFI 552 >gi|198418923|ref|XP_002123180.1| PREDICTED: similar to Seryl-tRNA synthetase, mitochondrial precursor (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase) (SerRSmt) [Ciona intestinalis] Length = 577 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 115/440 (26%), Positives = 205/440 (46%), Gaps = 24/440 (5%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 D++++ N + + +K R+ + + ++ ++ ++ ++E + S +QI + Sbjct: 122 DVKYMLDNLDKVQENMKMRNCDFDLVKMVVQPYKRMILVQNEVEKYNEMKESVKSQI-EN 180 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK-------LISCIPNVPLEEVP 114 + + N + L+ + + L++ L H + ++ +PN Sbjct: 181 VHQMNFDGLT-LEKQMAKLEQSLQYANNILHILNWVKRQVEAVFLANALMVPNQTHPLAK 239 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 G + I VG KP +H IGE L L R + +G R L+G A L Sbjct: 240 DGATEGNVIET--VGNKPEFDFPVHDHIFIGEKLKLFRQSRMSDFAGHRNYYLSGDAAEL 297 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----RWLI 229 E+AL Q+ +D + +S P +++D + G G + +D+ + L Sbjct: 298 EQALIQYTLD-KLKARNFHFISTPNILKDAMLEGAGVVSNKMEDLLYNIENASADGFCLA 356 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 TSE+ L +S I LP++ ++ +R E G+ D +G+ R HQF K E+ + Sbjct: 357 GTSEIGLAAYFSSHAILESQLPIKVCAVSTCYRKETGT-RLDPKGLFRVHQFNKVEMFGV 415 Query: 290 TREE---DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 T E +S + +E+ L+LHY V+ + DLG A + D+E W G++ Sbjct: 416 TGNESGNESEQLQLEFVEIQKELFSDLNLHYNVIDMPANDLGLPAFRKIDIEAWFPGRDR 475 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 Y EISS S C +FQSRR++ Y+ + KF HT+N + AV R +IA+LEN D + Sbjct: 476 YDEISSASNCTDFQSRRLHILYKHDD--KYKFAHTVNATACAVPRMIIALLENGQQKDKT 533 Query: 407 VTIPTVLRPYMNNLAVIKKE 426 + +P LR YM ++K++ Sbjct: 534 IVVPECLREYMGGKVILKRD 553 >gi|170589916|ref|XP_001899719.1| Sars1 protein [Brugia malayi] gi|158592845|gb|EDP31441.1| Sars1 protein, putative [Brugia malayi] Length = 432 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 107/365 (29%), Positives = 182/365 (49%), Gaps = 20/365 (5%) Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 + +K +T+ ++L +E ++ + + + I N+ VP+ + + N + ++ Sbjct: 48 KISQIKKLKNTIDQKLVEKRREMEKLEAKRHQRLIQIGNIIHPTVPVSDNEDNNRVEKTF 107 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 G + S H ++ + D DR T ++G R L G L LE+A+ F + + Sbjct: 108 GDIKTKKKYS--HIDLCMMIDGFDGDRGTSVAGGRGYFLKGPLVFLEQAVINFALQMLHC 165 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------------TTDGRWLIPTSEVSL 236 G+ + P +R E M Q+ +F +++ T D ++LI TSE + Sbjct: 166 -KGFIALYTPFFMRKEVMQEVAQLNQFDQELYKVTGKSSEVIGDETNDEKYLIATSEQPI 224 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--ED 294 + +E I LP+++ ++ FR E GS GRDTRGM R HQF K E I ++ Sbjct: 225 AAYHRNEWISEADLPIKYAGISSCFRQEVGSHGRDTRGMFRVHQFEKVEQFVICSPYDDE 284 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S+ + M+ AE+ K L + +R+V + +G+L +A K DLE W G +RE+ SCS Sbjct: 285 SWRILDEMVENAEDFCKALGIPFRIVCIVSGELNNAAAKKLDLEAWFPGSAAFRELVSCS 344 Query: 355 TCGNFQSRRMNSRYRDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 C ++Q+RR+ RY + + H LNG+ A R L A+LENY +G + +P + Sbjct: 345 NCTDYQARRLKIRYGKTKKLDGEVSYVHMLNGTMCATTRVLCALLENYQEENG-IRVPEI 403 Query: 413 LRPYM 417 LR +M Sbjct: 404 LRQFM 408 >gi|290559202|gb|EFD92555.1| seryl-tRNA synthetase [Candidatus Parvarchaeum acidophilus ARMAN-5] gi|326422542|gb|EGD71938.1| Seryl-tRNA synthetase [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'] Length = 430 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 127/431 (29%), Positives = 227/431 (52%), Gaps = 15/431 (3%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE----YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ++ ++ +N E L+ ++KKR++ P E ++ L+ + K +++R RN S Q Sbjct: 4 NLNYVSENKEALEYSIKKRYIHPIIENPVQRLIDLNNIIKKERAKADELRHNRNVISKQF 63 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + + + + EQ+ +E+E + K+L +PNV ++ P G Sbjct: 64 SENKDDIDSKEEQRML--VRKNMEQIKEMEEEIEKYEKEAKELFLWLPNVVSKDAPDGKD 121 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N+N+ +R G + H ++G GL+D + A K++G+RF+ + G L LE AL Sbjct: 122 DNDNVEVRKYGNIEDRKFEVKNHIDLGLEKGLIDVESAAKVTGSRFAYIKGKLVQLELAL 181 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-------DGRWLIPT 231 + I+ + G+T + P +++ + G + F D ++ T + R+LI T Sbjct: 182 ELYSIE-KIASKGFTPIIPPFMIKRDIYGGIAHMATFEDALYKVTGIEEQGEEERFLIST 240 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +E L Y++ I LP++ ++ +FR EAG+ G+DT+G+ R HQF + E + + + Sbjct: 241 TEHPLIAQYTNSTINENELPIKLVGVSSAFRKEAGAHGKDTKGIFRMHQFEQTEQIVLCK 300 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 EDS HE M+ EEI K L++ YRVVS TGD+G K YD+E +L Q YRE+ Sbjct: 301 PEDSDKFHEEMVKNVEEIWKELNIPYRVVSCSTGDMGVRDFKQYDIEAYLYSQKKYREVG 360 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 S ++ SRR+N +Y D + +TL+G+G+ + R +IAI++ Y +G++ +P Sbjct: 361 SFDNTTDWISRRLNIKYADKEGNK-HYLYTLDGTGLPIQRTIIAIMDTYQQPNGTIKVPD 419 Query: 412 VLRPYMNNLAV 422 VL+ ++ + Sbjct: 420 VLKKFVGFSEI 430 >gi|270001083|gb|EEZ97530.1| hypothetical protein TcasGA2_TC011377 [Tribolium castaneum] Length = 422 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 108/380 (28%), Positives = 175/380 (46%), Gaps = 21/380 (5%) Query: 53 SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 S I GN+ V LK + L +K + S + + IPN + Sbjct: 44 EISKNITNRKGIGNIERVHVLKKQLQEL----DPNDKLYNATKSEFETEVLRIPNRTHPQ 99 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 V + + + + + EI + L L+ D+ G++ G LA Sbjct: 100 VAGYGDSPKTVE---IVGTKPPDSSHLDFQEICKKLRLLRTDQIGNFCGSKSYYFLGELA 156 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGR 226 LE AL +++ + + VS P ++ + G G K A Sbjct: 157 ELEHALVRYVTSKLLF-NKFELVSVPDILPRGTIEGCGMNTKGARTQVYALDSTLHGPDW 215 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 L TSE++L S++ + S LPL+ ++ +R+E S + RG+ R H+F K E+ Sbjct: 216 CLSGTSEMALAGYLSNKTLNSDILPLKLAAVSRCYRAE-TSNLLEERGIYRVHEFTKVEM 274 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 +T+ ++S E +L +I + L LH++V+ + +LG A + YD+E W+ G+ L Sbjct: 275 FVVTQPQNSEQALEDILKLEMDIFESLGLHFQVLDMPPHELGAQAYRKYDIEAWMPGRGL 334 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 Y EISSCS C ++Q+RR+ R D F HTLNG+ AV R LIA++E +G+ Sbjct: 335 YGEISSCSNCLDYQARRLGIRTHDG------FVHTLNGTACAVPRLLIALVEMGQRKNGT 388 Query: 407 VTIPTVLRPYMNNLAVIKKE 426 V +P VL PYM +I K+ Sbjct: 389 VGLPEVLWPYMGGKQLIGKQ 408 >gi|225681943|gb|EEH20227.1| seryl-tRNA synthetase synthetase) [Paracoccidioides brasiliensis Pb03] Length = 564 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 120/510 (23%), Positives = 206/510 (40%), Gaps = 87/510 (17%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IR+N R+ ++ I L ++R L + + + + + I Sbjct: 54 DIKHIRENAALFSQNCIDRNYSDLAQYPYKIQRLSAESRELQDALREPQRQIKQIESSIA 113 Query: 60 QAI------------AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + + + +L+ TLK++ L +++L +PN Sbjct: 114 KLMVSSRNPDIEGSQKRMTEEELSSLRLSAQTLKDKSNHLTTARTNHTKEIERLALSLPN 173 Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE---ALGLMDFDRATKLSGARF 164 + + P G + I PS L H +L L++F A+ SG + Sbjct: 174 LTSPQTPPGPEPSLINYINYDPTSPSTTPLPTHHTSHVTIGTSLNLLNFTSASLTSGWGW 233 Query: 165 SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD------- 217 LT A LE+AL Q+ + + G+ +S P LV + G P+ A+ Sbjct: 234 YYLTNEAALLEQALIQYSLSVAL-RRGWQAISPPSLVYSHIAHACGFQPRDANNEQQVYH 292 Query: 218 ------DMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRD 271 D+ GR L T+E+ L +++ + + LP + ++ FR+EAG+ G D Sbjct: 293 IEQSERDVERGRPGRCLAGTAEIPLAAIFAGQEMAGNQLPAKVVGVSRCFRAEAGARGAD 352 Query: 272 TRGMLRQHQFWKCELVSITREEDS----------------------------FTEHERML 303 T+G+ R H+F K EL +++ + +L Sbjct: 353 TKGLYRVHEFTKVELFGWAVPDEAGEGTDGGTATTPVKGGSGSGIGKGSVTVSSLFYEIL 412 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ------------------- 344 EIL L+L RV+ + T DLG SA + D+EV + Sbjct: 413 DLQTEILTALNLPCRVLEMPTQDLGASAFRKRDIEVLFPSRMVSHSTSANANANAHANAK 472 Query: 345 -------NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 + + E++S S C ++Q+RR+ +R + N KF HT+NG+ +AV R + A+L Sbjct: 473 DTTIDIESGWGEVTSASICTDYQTRRLGTRMKAANGGGSKFPHTVNGTAMAVPRIIAALL 532 Query: 398 ENYLNA-DGSVTIPTVLRPYMNNLAVIKKE 426 E+ + G V +P VLR +M VI E Sbjct: 533 EHGWDERRGVVVLPEVLRGWMGGRRVIGGE 562 >gi|145628999|ref|ZP_01784798.1| seryl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|144978502|gb|EDJ88225.1| seryl-tRNA synthetase [Haemophilus influenzae 22.1-21] Length = 172 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 99/172 (57%), Positives = 121/172 (70%) Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 T P FRSEAGS GRDTRG++R HQF K E+V I + S E + AE++L+ L Sbjct: 1 MTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLL 60 Query: 314 DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS 373 +L YR V LCTGD+GF +CKTYDLEVW+ QN YREISSCS +FQ+RRM +R + Sbjct: 61 NLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCSNMWDFQARRMQARCKAKGD 120 Query: 374 KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 K + HTLNGSG+AVGR L+A+LENY NADGS+T+P LRPYM L VI K Sbjct: 121 KKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELRPYMGGLDVIGK 172 >gi|291002089|ref|XP_002683611.1| seryl-tRNA synthetase [Naegleria gruberi] gi|284097240|gb|EFC50867.1| seryl-tRNA synthetase [Naegleria gruberi] Length = 489 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 127/456 (27%), Positives = 202/456 (44%), Gaps = 43/456 (9%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA-------- 56 + I + + + +K R L + +L E+ + ++ E ++ R + Sbjct: 37 KMI-EKQDEMKENIKLRELNIDLDQVLKNYEQYIQIDQEYEQVQYLRKEIAEYLAGKRTS 95 Query: 57 -----QIGQAIAEG-NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 +I I E D+ K K ++ LEK ++EV L + +PN Sbjct: 96 EQVPIEIKNLIKEDLENKKADSWKVIGKEFKTKIQNLEKIKNEVYQELCEKTVKLPNFTE 155 Query: 111 EEVPIGTSANENILI-RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 E V + N N + H+EI E L L F+ A + SG++F L Sbjct: 156 EGVMKFSKENSNQPNLVKYVGEKKETIPKLSHYEICEKLDL--FEPANECSGSKFFFLKN 213 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-------- 221 LE AL F I + G+ + P L++ + G G P+ Sbjct: 214 EGVLLEVALQNFAIS-KLLKRGFKIIMPPELMKQSIVEGCGFQPRGEHSQIYRIENSNQE 272 Query: 222 ---------TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 D LI TSE+ L L+ +E + + PL++ L+ FR+EAG+AG Sbjct: 273 PTTTKNGETCNDSLCLIGTSEIGLAALHCNEFMPNFKGPLKYAGLSHCFRTEAGAAGSKD 332 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 RG+ R HQF K E+ E S + ++S EEI L H++++ + DLG A Sbjct: 333 RGLYRVHQFTKVEMFVYCEPEQSEALLDEIVSIQEEIFSELGFHFQILDMPCNDLGNPAF 392 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 + D+E ++ + Y E+SS S C ++QSR++N RYR N + + HTLNG+ +AV R Sbjct: 393 RKIDMEAFIPSRLGYGEVSSASNCTDYQSRKLNIRYRSNN--TTVYPHTLNGTAMAVPRA 450 Query: 393 LIAILENYL--NADGS--VTIPTVLRPYM-NNLAVI 423 +I ILEN + +G V IP L P+M + VI Sbjct: 451 IITILENNQFYDENGKLGVKIPKPLVPFMLSGQDVI 486 >gi|295660706|ref|XP_002790909.1| seryl-tRNA synthetase synthetase [Paracoccidioides brasiliensis Pb01] gi|226281161|gb|EEH36727.1| seryl-tRNA synthetase synthetase [Paracoccidioides brasiliensis Pb01] Length = 561 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 119/506 (23%), Positives = 207/506 (40%), Gaps = 83/506 (16%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IR+N R+ ++ I L ++R L + + + + I Sbjct: 54 DIKHIRENAALYSQNCIDRNYSDLAQYPYRIQRLSAESRELQDALREPHRQIKQIESSIA 113 Query: 60 QAI------------AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + + + +L+ TLK++ L +++L +PN Sbjct: 114 KLMISSRNPDIEESQKRKTEEELSSLRLSAQTLKDKSNHLTTARTNHTKEIERLALSLPN 173 Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE---ALGLMDFDRATKLSGARF 164 + + P G + I PS L H +L L++F A+ SG + Sbjct: 174 LTSPQTPAGPEPSLINYINYDPTSPSTTPLPTHHTSHVTIGTSLNLLNFTSASLTSGWGW 233 Query: 165 SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD------- 217 LT A LE+AL Q+ + + G+ +S P LV + G P+ A+ Sbjct: 234 YYLTNEAALLEQALIQYALSVAL-RRGWQAISPPSLVYSHIAHACGFQPRDANNEQQVYH 292 Query: 218 ------DMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRD 271 D+ GR L T+E+ L +++ + + + LP++ ++ FR+EAG+ G D Sbjct: 293 IEQSERDVERRRPGRCLAGTAEIPLAAIFAGQEMAANQLPVKVVGVSRCFRAEAGARGAD 352 Query: 272 TRGMLRQHQFWKCELVSITREEDS----------------------------FTEHERML 303 T+G+ R H+F K EL +++ + +L Sbjct: 353 TKGLYRVHEFTKVELFGWAVPDEAAEGTDGCTATTPVKGASGSGIGKGSVTTSSLFYEIL 412 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ------------------- 344 EIL L+L RV+ + T DLG SA + D+EV + Sbjct: 413 DLQTEILTALNLPCRVLEMPTQDLGASAFRKRDIEVLFPSRMVSHSTSANARANAKDTTI 472 Query: 345 ---NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 + + E++S S C ++Q+RR+ +R + N KF HT+NG+ +AV R + A+LE+ Sbjct: 473 DIESGWGEVTSASICTDYQTRRLGTRMKAGNGGGSKFPHTVNGTAMAVPRIIAALLEHGW 532 Query: 402 NAD-GSVTIPTVLRPYMNNLAVIKKE 426 + G V +P VLR +M VI + Sbjct: 533 DESRGVVVLPEVLRGWMGGKRVIGGK 558 >gi|116200207|ref|XP_001225915.1| hypothetical protein CHGG_08259 [Chaetomium globosum CBS 148.51] gi|88179538|gb|EAQ87006.1| hypothetical protein CHGG_08259 [Chaetomium globosum CBS 148.51] Length = 534 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 124/460 (26%), Positives = 209/460 (45%), Gaps = 37/460 (8%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 D++ IRQNPE + R+ + I L + ++ +R RRN Q+ Sbjct: 76 DLKHIRQNPELYAQNCRDRNYHAAAAYPAQINDLFSQWHAKQQEGRSLRERRNLLRRQLA 135 Query: 60 QAIAEGNLSL----------VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + + + L +E +K L +E+ E + + +++L IPN+ Sbjct: 136 DPGTTRDDADQDAAGFRSLSREQLLDEARKVKTDLSAIEEAESTLAAEMQRLALAIPNLT 195 Query: 110 LEEVPIGTSAN--ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 + P G I + + R H IG LG++DF A SG + L Sbjct: 196 SDATPRGNEPTVLSYINDHPEPGPAPSDRVWRSHVHIGAELGILDFAGAAATSGWGWYHL 255 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA----------- 216 A LE+AL + + T G+ +VS P +V G P+ A Sbjct: 256 IDEAAQLEQALVNYALTAAT-RAGWRQVSPPSMVYSHIAGACGFQPRDAHGETQIYAIAQ 314 Query: 217 --DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 +D L T+E+ L + + +++ + LP + + +R+EAG+ G +T+G Sbjct: 315 SAEDAARGKPELSLAGTAEIPLAGMKADTVLDERELPAKRVAASRCYRAEAGARGSETKG 374 Query: 275 MLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 + R H+F K EL + ++ + + M+ E+L L LH RV+ + T DLG SA Sbjct: 375 LYRVHEFTKVELFAWAAPDEGVAQELLDEMVDLQTELLGSLGLHCRVLEMPTADLGASAT 434 Query: 333 KTYDLEVWLAGQ----NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVA 388 + D+E + + + + E++S S C ++Q+RR+ +R + + K L + T+NG+ +A Sbjct: 435 RKCDIEAFFPSRRDRNDGWGEVTSASICTDYQTRRLATRVKLASGK-LVYPFTVNGTAMA 493 Query: 389 VGRCLIAILENYLNA-DGSVTIPTVLRPYMNNLAVIKKEH 427 V R L AILEN N + +VTIP VLRP+M I H Sbjct: 494 VPRVLAAILENGWNEAEKTVTIPEVLRPWMEEREKIGPRH 533 >gi|205361441|gb|ACI03599.1| dynein microtubule-binding domain (85:82) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 675 Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats. Identities = 136/424 (32%), Positives = 210/424 (49%), Gaps = 19/424 (4%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AE 64 LK+ +EP + L++ + +K ++ A I + A+ Sbjct: 234 YADMLKR--VEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQ 291 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + + A++ + + L L E L+ L+ +P P P+G + Sbjct: 292 AIKADLAAVEAKVNRSTALLKSLSAERERWEKKLEALLLQVPLPPWPGAPVGGEEANREI 351 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 R VG P +H + E G + RA++ SG+R L G LA E AL +F D Sbjct: 352 KR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGDLASYEEALLRFAAD 409 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNLYSHE 243 G+T P R++A GTG P + D + ++ + T+EV L L+S E Sbjct: 410 FMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTTGTAEVVLNALHSGE 468 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHER 301 I+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + Sbjct: 469 ILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQE 528 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+ Sbjct: 529 LLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQA 588 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLA 421 RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM Sbjct: 589 RRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKE 646 Query: 422 VIKK 425 V++ Sbjct: 647 VLEP 650 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 85/223 (38%), Gaps = 19/223 (8%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLD--------------EKNRILIKKIED 46 M+D++ +RQ PE A++++ + E +L++D E R L K ++ Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDVGLRKIKETVDQVEELRRDLRIKSQE 60 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + +N+ + + + + + + K + ++EQL ++ + S+K+ + + Sbjct: 61 LE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEIQEQLHKQQEVIADKQMSVKEDLDKVE 118 Query: 107 NVPLE--EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 +E + +RS+ P+A+ L+ E + D+ + + R Sbjct: 119 PAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTTDWKQIRSII-MRE 177 Query: 165 SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 + + + + + + + +V ++ Sbjct: 178 NFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLA 220 >gi|205361439|gb|ACI03598.1| dynein microtubule-binding domain (86:82) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 676 Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats. Identities = 136/424 (32%), Positives = 210/424 (49%), Gaps = 19/424 (4%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AE 64 LK+ +EP + L++ + +K ++ A I + A+ Sbjct: 235 YADMLKR--VEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQ 292 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + + A++ + + L L E L+ L+ +P P P+G + Sbjct: 293 AIKADLAAVEAKVNRSTALLKSLSAERERWEKKLEALLLQVPLPPWPGAPVGGEEANREI 352 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 R VG P +H + E G + RA++ SG+R L G LA E AL +F D Sbjct: 353 KR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGDLASYEEALLRFAAD 410 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNLYSHE 243 G+T P R++A GTG P + D + ++ + T+EV L L+S E Sbjct: 411 FMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTTGTAEVVLNALHSGE 469 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHER 301 I+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + Sbjct: 470 ILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQE 529 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+ Sbjct: 530 LLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQA 589 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLA 421 RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM Sbjct: 590 RRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKE 647 Query: 422 VIKK 425 V++ Sbjct: 648 VLEP 651 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 85/224 (37%), Gaps = 20/224 (8%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLD---------------EKNRILIKKIE 45 M+D++ +RQ PE A++++ + E +L++D E R L K + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDNVGLRKIKETVDQVEELRRDLRIKSQ 60 Query: 46 DIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 ++ +N+ + + + + + + K + ++EQL ++ + S+K+ + + Sbjct: 61 ELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEIQEQLHKQQEVIADKQMSVKEDLDKV 118 Query: 106 PNVPLE--EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 +E + +RS+ P+A+ L+ E + D+ + + R Sbjct: 119 EPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTTDWKQIRSII-MR 177 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 + + + + + + + +V ++ Sbjct: 178 ENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLA 221 >gi|205361443|gb|ACI03600.1| dynein microtubule-binding domain (84:82) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 674 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 136/424 (32%), Positives = 210/424 (49%), Gaps = 19/424 (4%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AE 64 LK+ +EP + L++ + +K ++ A I + A+ Sbjct: 233 YADMLKR--VEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQ 290 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + + A++ + + L L E L+ L+ +P P P+G + Sbjct: 291 AIKADLAAVEAKVNRSTALLKSLSAERERWEKKLEALLLQVPLPPWPGAPVGGEEANREI 350 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 R VG P +H + E G + RA++ SG+R L G LA E AL +F D Sbjct: 351 KR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGDLASYEEALLRFAAD 408 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNLYSHE 243 G+T P R++A GTG P + D + ++ + T+EV L L+S E Sbjct: 409 FMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTTGTAEVVLNALHSGE 467 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHER 301 I+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + Sbjct: 468 ILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQE 527 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+ Sbjct: 528 LLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQA 587 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLA 421 RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM Sbjct: 588 RRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKE 645 Query: 422 VIKK 425 V++ Sbjct: 646 VLEP 649 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 83/220 (37%), Gaps = 14/220 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKN--RILIKKIEDIRARRNSNSAQI 58 M+D++ +RQ PE A++++ + E +L++D + + ++E++R S ++ Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDGLRKIKETVDQVEELRRDLRIKSQEL 60 Query: 59 --------GQAIA-EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + + + K + ++EQL ++ + S+K+ + + Sbjct: 61 EVKNAAANDKLKKMVKDQQEAEKKKVMSQEIQEQLHKQQEVIADKQMSVKEDLDKVEPAV 120 Query: 110 LE--EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 +E + +RS+ P+A+ L+ E + D+ + + R + + Sbjct: 121 IEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTTDWKQIRSII-MRENFI 179 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 + + + + + +V ++ Sbjct: 180 PTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLA 219 >gi|205361432|gb|ACI03597.1| dynein microtubule-binding domain (89:82) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 679 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 136/424 (32%), Positives = 210/424 (49%), Gaps = 19/424 (4%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AE 64 LK+ +EP + L++ + +K ++ A I + A+ Sbjct: 238 YADMLKR--VEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQ 295 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + + A++ + + L L E L+ L+ +P P P+G + Sbjct: 296 AIKADLAAVEAKVNRSTALLKSLSAERERWEKKLEALLLQVPLPPWPGAPVGGEEANREI 355 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 R VG P +H + E G + RA++ SG+R L G LA E AL +F D Sbjct: 356 KR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGDLASYEEALLRFAAD 413 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNLYSHE 243 G+T P R++A GTG P + D + ++ + T+EV L L+S E Sbjct: 414 FMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTTGTAEVVLNALHSGE 472 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHER 301 I+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + Sbjct: 473 ILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQE 532 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+ Sbjct: 533 LLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQA 592 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLA 421 RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM Sbjct: 593 RRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKE 650 Query: 422 VIKK 425 V++ Sbjct: 651 VLEP 654 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 85/227 (37%), Gaps = 23/227 (10%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLD------------------EKNRILIK 42 M+D++ +RQ PE A++++ + E +L++D E R L Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDMHLNVGLRKIKETVDQVEELRRDLRI 60 Query: 43 KIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 K +++ +N+ + + + + + + K + ++EQL ++ + S+K+ + Sbjct: 61 KSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEIQEQLHKQQEVIADKQMSVKEDL 118 Query: 103 SCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLS 160 + +E + +RS+ P+A+ L+ E + D+ + + Sbjct: 119 DKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTTDWKQIRSII 178 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 R + + + + + + + +V ++ Sbjct: 179 -MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLA 224 >gi|205361445|gb|ACI03601.1| dynein microtubule-binding domain (82:82) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 672 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 136/424 (32%), Positives = 210/424 (49%), Gaps = 19/424 (4%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AE 64 LK+ +EP + L++ + +K ++ A I + A+ Sbjct: 231 YADMLKR--VEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQ 288 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + + A++ + + L L E L+ L+ +P P P+G + Sbjct: 289 AIKADLAAVEAKVNRSTALLKSLSAERERWEKKLEALLLQVPLPPWPGAPVGGEEANREI 348 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 R VG P +H + E G + RA++ SG+R L G LA E AL +F D Sbjct: 349 KR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGDLASYEEALLRFAAD 406 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNLYSHE 243 G+T P R++A GTG P + D + ++ + T+EV L L+S E Sbjct: 407 FMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTTGTAEVVLNALHSGE 465 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHER 301 I+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + Sbjct: 466 ILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQE 525 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+ Sbjct: 526 LLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQA 585 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLA 421 RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM Sbjct: 586 RRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKE 643 Query: 422 VIKK 425 V++ Sbjct: 644 VLEP 647 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 84/218 (38%), Gaps = 12/218 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI-- 58 M+D++ +RQ PE A++++ + E +L++D K + + ++E++R S ++ Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDRKIKETVDQVEELRRDLRIKSQELEV 60 Query: 59 ------GQAIA-EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + + K + ++EQL ++ + S+K+ + + +E Sbjct: 61 KNAAANDKLKKMVKDQQEAEKKKVMSQEIQEQLHKQQEVIADKQMSVKEDLDKVEPAVIE 120 Query: 112 --EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 + +RS+ P+A+ L+ E + D+ + + R + + Sbjct: 121 AQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTTDWKQIRSII-MRENFIPT 179 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 + + + + + +V ++ Sbjct: 180 IVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLA 217 >gi|327289361|ref|XP_003229393.1| PREDICTED: LOW QUALITY PROTEIN: seryl-tRNA synthetase, mitochondrial-like [Anolis carolinensis] Length = 511 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 128/442 (28%), Positives = 215/442 (48%), Gaps = 23/442 (5%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +D++ ++ E + L+ R IL++ +K + ++I + +N + + Sbjct: 58 IDVEALKVRLEAAERELESRKGPLRAQDLRQILAVWQKLVEVQEEIATVETEKNRVAENV 117 Query: 59 GQAIAEGNL------SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + L DAL+ + L+ +L L +EE E+ L +PN + Sbjct: 118 RILVKSQDSNTSQSLPLYDALRKQGRDLRLRLNALRQEEMELDEKYYLLALKLPNRTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VPIG + ++ VG KP + H E+GE LG++ R + +SG R L G A Sbjct: 178 VPIGDESQAKVIET-VGSKPVFDFEVKGHLELGEELGIIRQRRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L++AL QF + + G+ ++ P L++ G G +P + + Sbjct: 237 ILQQALVQFAL-KKLMKKGFIPMAVPDLLKGAVFEGCGMLPDASPSQLYNIDPSRFEDLS 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L TSEV + + ++ K +P+R + +R+E + G+D G+ R HQF K E+ Sbjct: 296 LAGTSEVGIAGYFMDHAVDLKDMPVRTVCSSTCYRAETDT-GKDPWGLYRVHQFAKVEMF 354 Query: 288 SITREE---DSFTEHERMLSCAEEILKRLDLHYRVV-SLCTGDLGFSACKTYDLEVWLAG 343 +T E +S E L+ +EI L LH++ V + T +LG A + +D+E W+ G Sbjct: 355 GVTANETGLESAALLEEFLTLQKEIFSELGLHFKXVLDMPTQELGLPAYRKFDIEAWMPG 414 Query: 344 QNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 + Y EISS S C ++QSRR+N Y + + L + HT+NG+ AV R LI I+E+ Sbjct: 415 RGKYGEISSASNCTDYQSRRLNIMYYNQEGR-LCYAHTVNGTACAVPRMLITIIESNQCK 473 Query: 404 DGSVTIPTVLRPYMNNLAVIKK 425 DGSV +P L+P M + VI K Sbjct: 474 DGSVRVPKALQPLM-GMEVIDK 494 >gi|218670542|ref|ZP_03520213.1| seryl-tRNA synthetase [Rhizobium etli GR56] Length = 194 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 137/192 (71%), Positives = 159/192 (82%) Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++LTNL EI++ + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT E Sbjct: 1 MTLTNLVREEILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAE 60 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 + EHERM +CAEE+LKRL LH+R ++LCTGD+GF + KTYDLEVWL GQN +REISSC Sbjct: 61 SAIAEHERMTACAEEVLKRLGLHFRTMTLCTGDMGFGSRKTYDLEVWLPGQNAFREISSC 120 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S CG+FQ+RRMN+RYR + KS +F HTLNGSG AVGRCLIA+LENYLN DGSVTIP VL Sbjct: 121 SVCGDFQARRMNARYRGKDDKSNRFVHTLNGSGTAVGRCLIAVLENYLNEDGSVTIPDVL 180 Query: 414 RPYMNNLAVIKK 425 PYM L I++ Sbjct: 181 LPYMGGLTKIER 192 >gi|160331655|ref|XP_001712534.1| sys1 [Hemiselmis andersenii] gi|159765983|gb|ABW98209.1| sys1 [Hemiselmis andersenii] Length = 428 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 106/426 (24%), Positives = 189/426 (44%), Gaps = 17/426 (3%) Query: 4 IQWIR--QN--PEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 I+ R +N P+ + K+R+ + + + LD + K + + N S I Sbjct: 3 IKSFRLGENIFPDIFRGSQKRRNKDKSVIDQSIILDIYWKKTKYKFDFSKKFLNHTSRLI 62 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ L L L LK+++ LEK + S I N+ V +G + Sbjct: 63 GKFQNIKKLFLFPKLI----FLKKKILGLEKIYQIFQEKKTETTSLIGNLIHTSVSLGKN 118 Query: 119 ANENILIRSVGKKPSAIHLS-REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A L S ++ H E+ + +G +D+DR K SG R L G L A Sbjct: 119 AKLVCLKIQKNFSRSKRYVIKYNHVELLKLIGAVDYDRGIKTSGNRGYFLKGIGLLLNNA 178 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--GRWLIPTSEVS 235 L ++ +D + + + P + + Q+ F + ++ ++LI TSE Sbjct: 179 LIRYGLDFLVKRN-FIALQTPFFMNKNLLSKCSQLEDFKEQLYGLNQGEDKFLIATSEQP 237 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED- 294 ++ + E IE+ PL++ + FR E+GS G+DT G+ R HQF K E + + Sbjct: 238 ISVFHLDETIENGKFPLKYVGFSSCFRKESGSHGKDTSGLFRVHQFEKVEQFILCSSDYL 297 Query: 295 -SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S+ ML + +++ ++ +++ + L +A K DL + N +RE+ SC Sbjct: 298 ESWVFFNEMLENVKFFYSSINIPFKFLNIASNSLNNTASKKIDLLGFFPKSNTFRELVSC 357 Query: 354 STCGNFQSRRMNSRYRDPNSKS-LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 S C ++QS+++N + + + H LN + A R + ILEN+ G + IP++ Sbjct: 358 SNCTSYQSKKINIKVKPSQKNPGNNYPHMLNSTLCATTRVICCILENFQTESG-IIIPSI 416 Query: 413 LRPYMN 418 LR Y+ Sbjct: 417 LRNYVG 422 >gi|85000409|ref|XP_954923.1| seryl-tRNA synthetase [Theileria annulata strain Ankara] gi|65303069|emb|CAI75447.1| seryl-tRNA synthetase, putative [Theileria annulata] Length = 532 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 123/532 (23%), Positives = 204/532 (38%), Gaps = 108/532 (20%) Query: 2 LDIQWIRQN--PEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRN----SN 54 LDI + R + L + ++R + ++ D+ + + + ++ N Sbjct: 3 LDINYFRDENLLKQLKESEERRCESNSVVDKVIEADKDWKKAMFAYDQLKKSVNEVSKKI 62 Query: 55 S---------------------AQIGQAIAEGNLSLVDALKN------------------ 75 S + ++ +G + ++ Sbjct: 63 SEYTKLNRHKGDLSNDSEFLGLKNLAESKKQGIAECLKNIEECNDKRNSLLKMVGNVVSP 122 Query: 76 -----ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR---- 126 + L E + S + + + N Sbjct: 123 DVIASKDEALNEVIRSWVPNLFPWESKPDRNTTDTNFTNNQNSLQFNGKNSLKTQNSGFN 182 Query: 127 -----------------SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 + + +H EI L ++ ++A +++G R L G Sbjct: 183 TEDSGTATENSGVSYVGKLPEIKRPPWKILQHHEILAKLNSLEINKAVEIAGHRAFFLKG 242 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------ 223 L AL Q+ + GY V P +R E M ++ F ++C Sbjct: 243 KGCLLNMALIQYGLQF-LVRKGYLPVHTPYFMRKEVMSECAELDDFETTLYCIPLTDSTA 301 Query: 224 ----------------------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 + +LI TSE + L+ +E+ + K LP+R+ Sbjct: 302 PNATADATKTTSTNGTRDMELKEKDVDKNKLFLIATSEQPIAALHRNEVYQKKQLPIRYA 361 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 ++ FR EAG+ G+D RG+ R HQF K E + E+S EHE+M+ +EE + L L Sbjct: 362 GISTCFRREAGAHGKDLRGIFRVHQFQKVEQFVVCTPENSIQEHEQMVKFSEEFYRSLKL 421 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS 375 YR+VS+ G L +A K YDLE W G YRE+ SCS C ++Q++ +NS++ D N++ Sbjct: 422 PYRIVSIVAGALNKAASKKYDLEAWFPGYEDYRELVSCSNCTDYQAQNLNSKFYDKNNQD 481 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEH 427 K H LNG+ VA RCL ILENY DG + +P L PYM+ L I E+ Sbjct: 482 RKHVHMLNGTLVASQRCLCCILENYQTPDG-IIVPEPLVPYMDGLEFIPFEN 532 >gi|218507626|ref|ZP_03505504.1| seryl-tRNA synthetase [Rhizobium etli Brasil 5] Length = 189 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 132/187 (70%), Positives = 152/187 (81%) Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L EI++ + LPLRFT L PSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT E E Sbjct: 1 LVREEILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAERGIAE 60 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 HERM +CAEE+LKRL LH+R ++LCTGD+GF + KTYDLEVWL GQN +REISSCS CG+ Sbjct: 61 HERMTACAEEVLKRLGLHFRTMTLCTGDMGFGSRKTYDLEVWLPGQNAFREISSCSVCGD 120 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ+RRMN+RYR + K+ +F HTLNGSG AVGRCLIA+LENY N DGSVTIP VL PYM Sbjct: 121 FQARRMNARYRGKDDKTNRFVHTLNGSGTAVGRCLIAVLENYWNEDGSVTIPDVLLPYMG 180 Query: 419 NLAVIKK 425 L I++ Sbjct: 181 GLTKIER 187 >gi|58262738|ref|XP_568779.1| seryl-tRNA synthetase [Cryptococcus neoformans var. neoformans JEC21] gi|134108704|ref|XP_777005.1| hypothetical protein CNBB5310 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259688|gb|EAL22358.1| hypothetical protein CNBB5310 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223429|gb|AAW41472.1| seryl-tRNA synthetase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 506 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 131/462 (28%), Positives = 210/462 (45%), Gaps = 43/462 (9%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKN---RILIKKIEDIRARRNSNSAQIG 59 D + +P + R + ++ L R L++K+ RAR+ I Sbjct: 43 DYTKLLSDPSLTLQNAQLRAFPLVTNHLSELSSLRDTQRELLQKLNATRARQKELGNSIK 102 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + V+ K + LK + E SSL L +PN PIG Sbjct: 103 KLKGL----EVEEAKKQAKELKSLIKEFEVSLSTAESSLLDLALSLPNFSHPSTPIGPEE 158 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N L G P +R+H + L+D + K +G+ + L G LA LE+AL Sbjct: 159 NARTLET-FGPTPIPSDPARDHVAFAQYFSLLDTSASAKTTGSSWPYLRGSLAFLEQALI 217 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD------------MFCTTDGRW 227 + +++ ++HG+T V P +V+ + + G P+ + Sbjct: 218 SYALNI-ANKHGFTPVIPPDVVKTDIAWRCGFQPRDQATNAAASQTYHLQPTSNSAQSLC 276 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L TSE+ L +++ II ++LP R + +FR+EAG+ G DTRG+ R HQF K EL Sbjct: 277 LAGTSEIPLAGMFADMIIPEENLPQRVVGVGRAFRAEAGARGADTRGLYRVHQFTKVELF 336 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 ++ E++S + E M +EI++ L L RV+ + T +LG SA + YD+E W+ G+ + Sbjct: 337 VVSGEKESESMMEEMREVQKEIVQGLGLSVRVLDMPTEELGASAHRKYDMEAWMPGRGKW 396 Query: 348 REISSCSTCGNFQSRRMNSRYR----------DPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 EI+S S C ++QSRR++ YR DP+S L F HTLNG+ A+ R L+A+L Sbjct: 397 GEITSTSNCTDYQSRRLSITYRPQPTSPTHAIDPSSGPLPFAHTLNGTAAAIPRLLVALL 456 Query: 398 ENYLNADGS------------VTIPTVLRPYMNNLAVIKKEH 427 EN L D + + +P L+ + I Sbjct: 457 ENGLQYDKTGEGDSEQVIYTGLELPKALQRFYVGSDEIGGRG 498 >gi|167524046|ref|XP_001746359.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775121|gb|EDQ88746.1| predicted protein [Monosiga brevicollis MX1] Length = 887 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 123/491 (25%), Positives = 208/491 (42%), Gaps = 81/491 (16%) Query: 14 LDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS---- 68 + + R+ + + I+ D R K + +N+ + +G + Sbjct: 136 VKKIQRDRYKDEGLVQQIMDADLAWRQTAFKRDLYSKVKNATAKTVGAKMKAKEAVGDSD 195 Query: 69 -------------------------LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 V L+ + + E +E++ E+ + +L+ Sbjct: 196 ALPANITTALMDDPKALTAEVLGGLTVTQLRKLSGFIDEARKTVEQQAAELEAQRDELLR 255 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKP-SAIHLSREHFEIGEALGLMDFDRATKLSGA 162 + NV VPI + + N+++R+VG + H ++ + +D R T +G+ Sbjct: 256 SVGNVLHPSVPISDNEDNNLILRTVGDAAVNQTRKEYSHVDLITMIDGVDTQRGTVAAGS 315 Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG------------ 210 R L G LE+AL F + + G+T +S PL +R E M Sbjct: 316 RCYYLKGAAVALEQALCAFSVQF-LMDRGFTALSPPLFMRKEVMQEVRTLEFCLVATRVM 374 Query: 211 ---------------QIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHE 243 Q+ +F ++++ T + ++LI T+E + + +E Sbjct: 375 CHTDRFRMFLRTQVAQLSQFNEELYKVTGKASERAEDAEVEEKYLIATAEQPIAAFHRNE 434 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHER 301 I + LPLR+ ++ FR E GS GRDT G+ R HQF K E I + S+ + Sbjct: 435 WINPEELPLRYVGVSECFRQEVGSHGRDTLGIFRVHQFKKIEQFVICSPHDDISWKLMDE 494 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 ML+ AE+ LK + L Y+VVS+ +G L +A K D+E W G +RE+ SCS C ++Q+ Sbjct: 495 MLANAEDFLKAIGLPYQVVSIVSGALNLAAAKKNDVEAWFPGSGAFRELVSCSNCTDYQA 554 Query: 362 RRMNSRYRDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNAD----GSVTIPTVLRP 415 RR+ RY + + H LN + A R + ILEN+ + G V +P VLRP Sbjct: 555 RRLKIRYGQTKKLNARTDYVHMLNSTLCATTRNVCCILENFQVGNFSNGGGVVVPEVLRP 614 Query: 416 YMNNL--AVIK 424 YM + I Sbjct: 615 YMPSQYREFIP 625 >gi|293977788|ref|YP_003543218.1| seryl-tRNA synthetase [Candidatus Sulcia muelleri DMIN] gi|292667719|gb|ADE35354.1| seryl-tRNA synthetase [Candidatus Sulcia muelleri DMIN] Length = 414 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 135/392 (34%), Positives = 210/392 (53%), Gaps = 13/392 (3%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 YIL L +K + + K++++ S +I + + ++N +S LKE+L I Sbjct: 29 INYILFLYKKKKKIKSKLDNLIYYIKFFSKKI--------KTNEELIRNYSSFLKEKLKI 80 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 ++ + + ++I IPN+P EEV + ++ ++ H+E+GE Sbjct: 81 NIFFIKKIQNKIFEIIIKIPNLPFEEVQKEKNFFYKEILYKREIINNSKKKIY-HWELGE 139 Query: 147 ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAM 206 L + +SG F+V A L+R+L QF ++ + S GY E P +V ++ Sbjct: 140 KFKLFSTKKGAIISGNGFNVFFNKGALLQRSLIQFFLEKNISS-GYIEYVLPYIVNINSV 198 Query: 207 YGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 YGTGQIP M+ D +LIPT EV L N++ I + LP++ TT FR E+ Sbjct: 199 YGTGQIPDKKYQMYNINYDNLYLIPTGEVPLINIFKKTIFKESELPVKATTYTSCFRRES 258 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GS G RG+ R HQF K E++ I+ +DS+ M++ + +L+ L+L +R++ LC Sbjct: 259 GSYGSKVRGLNRLHQFDKVEIIQISTCKDSYLSFNDMVNHIKSLLRSLNLPFRIIRLCGK 318 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS 385 DLGF++ TYD EV+ GQ + E+SS S C NFQS R+ RYR + K +K HTLNGS Sbjct: 319 DLGFTSALTYDFEVYSPGQKKWLEVSSVSNCTNFQSNRLKLRYRTFDGK-IKLCHTLNGS 377 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +A+ R + AILEN + + IP VL YM Sbjct: 378 SLAIPRIISAILENNQYKN-YIIIPKVLIKYM 408 >gi|302504160|ref|XP_003014039.1| hypothetical protein ARB_07759 [Arthroderma benhamiae CBS 112371] gi|291177606|gb|EFE33399.1| hypothetical protein ARB_07759 [Arthroderma benhamiae CBS 112371] Length = 534 Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats. Identities = 129/454 (28%), Positives = 206/454 (45%), Gaps = 59/454 (12%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--------IAEGNLSLVDALKNETSTL 80 + SL ++ L ++ RAR +IG+ + +DAL+ E L Sbjct: 81 QLQSLAKEASDLQHALKHPRARIKQVEKEIGKLATVAVRQQLEPEQNGALDALRQEAKEL 140 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP-------- 132 K+ + E +++L +PN+ ++ PIG I + P Sbjct: 141 KDASQQMMDRREECMEEIQQLALSLPNLTSKDTPIGDIPRIVTYINFDPESPPLYASPTS 200 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 SA + R H IG LGL+DF + +G + LT LE AL Q+ + + G+ Sbjct: 201 SAAAIPRSHVSIGTELGLLDFTSSATSTGWGWYFLTNEGCLLEHALVQYALTT-ARKKGW 259 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-------------DGRWLIPTSEVSLTNL 239 VS P +V G P+ A++ R L T+E+ L + Sbjct: 260 KPVSPPSVVYSHIAEACGFQPRDANNEQQIWSIQQTERDKAAHKPQRSLTGTAEIPLAAM 319 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED----- 294 Y+ + I ++ LPL+F + +R+EAG+ G DT+G+ R H+F K EL + Sbjct: 320 YAGQEIRAEQLPLKFVGASRCYRAEAGARGVDTKGLYRVHEFTKVELFGWADNIEQDGTG 379 Query: 295 -------SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ--- 344 S + E MLS +IL L+L RV+ + + DLG SA + D+EV + Sbjct: 380 ANTNGITSTSLFEEMLSIQTDILSSLNLPCRVLEMSSSDLGASAIRKRDIEVLFPSRIPN 439 Query: 345 ------------NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 + + E++S S C ++QSRR+ +R RD + +F HT+NG+ +AV R Sbjct: 440 KSDSSSVLDPDYSGWGEVTSTSICTDYQSRRLGTRVRDSSG-VSRFPHTVNGTAMAVPRV 498 Query: 393 LIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKK 425 L AILE+ + G V +P VLRP+M L VI++ Sbjct: 499 LAAILEHGWDEALGGVVVPEVLRPWMGGLEVIQR 532 >gi|46206170|ref|ZP_00047629.2| COG0172: Seryl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 378 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 129/388 (33%), Positives = 194/388 (50%), Gaps = 14/388 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEY-ILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD NP+ + + R +P Y L D ++R + + E +RA + S Q+ Sbjct: 1 MLD------NPDIVRASQFTRVTDPALLYSALDADARHRAALSEFESLRAEQKSLGKQVA 54 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA E L+ K + +K + + E+ L ++ + + P Sbjct: 55 QAQGEEKQELLARTKQLAADVKARQADADAAAEELRGLLFRISNVVEGAP---PGGEDDY 111 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 ++ + R+H E+GE L +D +R K+SGARF LTG A LE AL Sbjct: 112 VVLREEGTIRDFAAEGFTPRDHLELGEGLRAIDTERGAKVSGARFYYLTGVGARLELALL 171 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 +D G+T V P LVR E M GTG + AD+++ D +L+ TSEV+L Sbjct: 172 NAAMDTAV-AAGFTPVITPTLVRPEVMQGTGFLGAHADEIYRLEKDDLYLVGTSEVALAG 230 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +++EI++ PLR+ + +R EAGS G+D RG++R HQF K E+ S D+ E Sbjct: 231 YHANEIVDLSGGPLRYAGWSACYRREAGSHGKDVRGIIRVHQFHKVEMFSYCDPADAAAE 290 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 H+R+L E++L+ +DL YRV+ GDLG SA + +D E WL Q Y E++S S C Sbjct: 291 HQRLLGWEEQMLRLVDLPYRVIDTAAGDLGSSAARKFDCEAWLPTQQRYLELTSTSNCTT 350 Query: 359 FQSRRMNSRYRDPNSKSLK--FTHTLNG 384 FQ+RR+N R R + TLNG Sbjct: 351 FQARRLNVRERVETDGKTETRTVATLNG 378 >gi|161833677|ref|YP_001597873.1| seryl-tRNA synthetase [Candidatus Sulcia muelleri GWSS] gi|152206167|gb|ABS30477.1| seryl-tRNA synthetase [Candidatus Sulcia muelleri GWSS] Length = 414 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 135/392 (34%), Positives = 209/392 (53%), Gaps = 13/392 (3%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 YIL L +K + + K++++ S +I + + ++N +S LKE+L I Sbjct: 29 INYILFLYKKKKKIKSKLDNLIYYIKFFSKKI--------KNNEELIRNYSSFLKEKLKI 80 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 ++ + + ++I IPN+P EEV + ++ + H+E+GE Sbjct: 81 NIFFIKKIKNKIFEIIIKIPNLPFEEVQKEKNFFYKEILYKREIINNYKKKIY-HWELGE 139 Query: 147 ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAM 206 L + +SG F+V A L+R+L QF ++ + S GY E P +V ++ Sbjct: 140 KFKLFSTKKGAIISGNGFNVFFNKGALLQRSLIQFFLEKNISS-GYIEYVLPYIVNINSV 198 Query: 207 YGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 YGTGQIP M+ D +LIPT EV L N++ I + LP++ TT FR E+ Sbjct: 199 YGTGQIPDKKYQMYNINYDNLYLIPTGEVPLINIFKKTIFKESELPVKATTYTSCFRRES 258 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GS G RG+ R HQF K E++ I+ +DS+ M++ + +L+ L+L +R++ LC Sbjct: 259 GSYGSKVRGLNRLHQFDKVEIIQISTCKDSYLSFNDMVNHIKSLLRSLNLPFRIIRLCGK 318 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS 385 DLGF++ TYD EV+ GQ + E+SS S C NFQS R+ RYR + K +K HTLNGS Sbjct: 319 DLGFTSALTYDFEVYSPGQKKWLEVSSVSNCTNFQSNRLKLRYRTFDGK-IKLCHTLNGS 377 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 +A+ R + AILEN + + IP VL YM Sbjct: 378 SLAIPRIISAILENNQYKN-YIIIPKVLIKYM 408 >gi|255660022|ref|ZP_05405431.1| seryl-tRNA synthetase [Mycoplasma genitalium G37] Length = 375 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 142/378 (37%), Positives = 215/378 (56%), Gaps = 10/378 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R N + L +R++ Q + D+ R ++++E +++ + Q+ Sbjct: 1 MLDPNKLRNNYDFFKKKLLERNVNEQLLNQFIQTDKLMRKNLQQLELANQKQSLLAKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + L E+ LK+++ L + + + L+ PN+ E VP+G + Sbjct: 61 KQKDNKK------LLAESKELKQKIENLNNAYKDSQNISQDLLLNFPNIAHESVPVGKNE 114 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + N+ + G+KP H E+ E L L+ FD+ATK+SG RF T A L RA+ Sbjct: 115 SANLELLKEGRKPVFDFKPLPHRELCEKLNLVAFDKATKISGTRFVAYTDKAAKLLRAIT 174 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTN 238 MIDL+ + Y E + P+++ + ++ TGQ+PKF DD+F +L PT EV L N Sbjct: 175 NLMIDLN--KSKYQEWNLPVVINELSLRSTGQLPKFKDDVFKLENTRYYLSPTLEVQLIN 232 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+++EI + LP +T +FR EAGSAG+ T+G +R HQF K ELV + E++ E Sbjct: 233 LHANEIFNEEDLPKYYTATGINFRQEAGSAGKQTKGTIRLHQFQKTELVKFCKPENAINE 292 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E M+ AE+ILK L L +R + LCTGD+GFSA KTYDLEVW+A N YRE+SSCS+CG+ Sbjct: 293 LEAMVRDAEQILKALKLPFRRLLLCTGDMGFSAEKTYDLEVWMAASNEYREVSSCSSCGD 352 Query: 359 FQSRRMNSRYRDPNSKSL 376 FQ+RR RY+D N+ Sbjct: 353 FQARRAMIRYKDINNGKT 370 >gi|321252501|ref|XP_003192427.1| seryl-tRNA synthetase [Cryptococcus gattii WM276] gi|317458895|gb|ADV20640.1| Seryl-tRNA synthetase, putative [Cryptococcus gattii WM276] Length = 506 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 127/463 (27%), Positives = 209/463 (45%), Gaps = 43/463 (9%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKN---RILIKKIEDIRARRNSNSAQI 58 LD + +P + R ++ L R L++K+ RAR+ ++ Sbjct: 42 LDYTKLLSDPPSTLENAQLRAFPLSGNHLSDLSSLRDTQRELLQKLNVTRARQ----KEV 97 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +I + + K + LK + E SSL L +PN PIG Sbjct: 98 GNSIKKSKGPEAEKAKKQAKELKSLIKDYEVSLSTTESSLLDLALSLPNFSHPCTPIGPE 157 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 N L G +R+H + L+D ++K +G+ + L G LA LE+AL Sbjct: 158 GNARTLET-FGPTLIPSDPARDHVAFAQYFSLLDTSASSKTTGSSWPYLRGSLALLEQAL 216 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA------------DDMFCTTDGR 226 + + + T +HG+ V P +V+ + + G P+ + + Sbjct: 217 ISYALSIAT-KHGFVPVIPPDVVKTDIAWRCGFQPRDQATNAAASQTYHLEPTSNSAPSL 275 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 L TSE+ L +++ II ++LP R + +FR+EAG+ G DTRG+ R HQF K EL Sbjct: 276 CLAGTSEIPLAGMFADMIIPEENLPQRVVGVGRAFRAEAGARGADTRGLYRVHQFTKVEL 335 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + EE+S + E M +EI++ L L RV+ + T +LG SA + YD+E W+ G+ Sbjct: 336 FVVGSEEESESVMEEMRGVQKEIVQGLGLSVRVLDMPTEELGASAHRKYDMEAWMPGRGK 395 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNSKSLK----------FTHTLNGSGVAVGRCLIAI 396 + EISS S C ++QSRR++ YR + F HTLNG+ A+ R L+A+ Sbjct: 396 WGEISSTSNCTDYQSRRLSITYRPQPTSPTHAIDPPSGPLPFAHTLNGTAAAIPRLLVAL 455 Query: 397 LENYLNADGS------------VTIPTVLRPYMNNLAVIKKEH 427 +EN L + + + +P L+ + I ++ Sbjct: 456 IENGLKYEKTGEGDAEQVVYKGLELPKALQRFYVGSDEIGEKG 498 >gi|205361465|gb|ACI03611.1| dynein microtubule-binding domain (19:19) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 546 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 127/358 (35%), Positives = 189/358 (52%), Gaps = 8/358 (2%) Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + L+ +L LE + + L+ L+ +P P P+G + R VG Sbjct: 169 ADMLKRVEPLRNELQKLEDDAKDNQQKLEALLLQVPLPPWPGAPVGGEEANREIKR-VGG 227 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 P +H + E G + RA++ SG+R L G LA E AL +F D Sbjct: 228 PPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGDLASYEEALLRFAADFMA-RR 285 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNLYSHEIIESKS 249 G+T P R++A GTG P + D + ++ + T+EV L L+S EI+ ++ Sbjct: 286 GFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTTGTAEVVLNALHSGEILPYEA 345 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAE 307 LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + +L AE Sbjct: 346 LPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAE 405 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 EIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+RR N R Sbjct: 406 EILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLR 465 Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 YRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM V++ Sbjct: 466 YRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKEVLEP 521 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 23/35 (65%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDE 35 M+D++ +RQ PE A++++ + E +L++DE Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDE 35 >gi|205361447|gb|ACI03602.1| dynein microtubule-binding domain (54:47) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 609 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 132/390 (33%), Positives = 204/390 (52%), Gaps = 13/390 (3%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 ++K++E + RN + A+ N + ++ L+ + ++E + S L Sbjct: 205 DMLKRVEPL---RNELQKL--EDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISKL 259 Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 + L+ +P P P+G + R VG P +H + E G + RA++ Sbjct: 260 EALLLQVPLPPWPGAPVGGEEANREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQ 317 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 SG+R L G LA E AL +F D G+T P R++A GTG P + D Sbjct: 318 DSGSRSYALKGDLASYEEALLRFAADFMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQ 376 Query: 219 MFCTTDGR-WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + ++ + T+EV L L+S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R Sbjct: 377 VRAESETDTYTTGTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMR 436 Query: 278 QHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 HQF K E +T E S + +L AEEIL+ L+L YR+V + TGD+G + Sbjct: 437 VHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQV 496 Query: 336 DLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIA 395 D+EV+L + YRE SCS ++Q+RR N RYRDP + +++ +TLN + +A R L Sbjct: 497 DIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAM 555 Query: 396 ILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +LEN+ DG V +P L PYM V++ Sbjct: 556 LLENHQLQDGRVRVPQALIPYM-GKEVLEP 584 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 53/119 (44%), Gaps = 3/119 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKK--IEDIRARRNSN-SAQ 57 M+D++ +RQ PE A++++ + E +L++D +KK + A + S + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDAAANDKLKKMVKDQQEAEKKKVMSQE 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 I + + + + D + L + P + + ++ V S K+ + + ++ + Sbjct: 61 IQEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVK 119 >gi|205361455|gb|ACI03606.1| dynein microtubule-binding domain (47:47) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 602 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 132/390 (33%), Positives = 204/390 (52%), Gaps = 13/390 (3%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 ++K++E + RN + A+ N + ++ L+ + ++E + S L Sbjct: 198 DMLKRVEPL---RNELQKL--EDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISKL 252 Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 + L+ +P P P+G + R VG P +H + E G + RA++ Sbjct: 253 EALLLQVPLPPWPGAPVGGEEANREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQ 310 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 SG+R L G LA E AL +F D G+T P R++A GTG P + D Sbjct: 311 DSGSRSYALKGDLASYEEALLRFAADFMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQ 369 Query: 219 MFCTTDGR-WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + ++ + T+EV L L+S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R Sbjct: 370 VRAESETDTYTTGTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMR 429 Query: 278 QHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 HQF K E +T E S + +L AEEIL+ L+L YR+V + TGD+G + Sbjct: 430 VHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQV 489 Query: 336 DLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIA 395 D+EV+L + YRE SCS ++Q+RR N RYRDP + +++ +TLN + +A R L Sbjct: 490 DIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAM 548 Query: 396 ILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +LEN+ DG V +P L PYM V++ Sbjct: 549 LLENHQLQDGRVRVPQALIPYM-GKEVLEP 577 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 54/116 (46%), Gaps = 4/116 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +RQ PE A++++ + E +L++D+K ++ E ++ S +I + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDKKMVKDQQEAE----KKKVMSQEIQE 56 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + + + D + L + P + + ++ V S K+ + + ++ + Sbjct: 57 QLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVK 112 >gi|205361461|gb|ACI03609.1| dynein microtubule-binding domain (22:19) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 549 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 127/358 (35%), Positives = 189/358 (52%), Gaps = 8/358 (2%) Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + L+ +L LE + + L+ L+ +P P P+G + R VG Sbjct: 172 ADMLKRVEPLRNELQKLEDDAKDNQQKLEALLLQVPLPPWPGAPVGGEEANREIKR-VGG 230 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 P +H + E G + RA++ SG+R L G LA E AL +F D Sbjct: 231 PPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGDLASYEEALLRFAADFMA-RR 288 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNLYSHEIIESKS 249 G+T P R++A GTG P + D + ++ + T+EV L L+S EI+ ++ Sbjct: 289 GFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTTGTAEVVLNALHSGEILPYEA 348 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAE 307 LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + +L AE Sbjct: 349 LPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAE 408 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 EIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+RR N R Sbjct: 409 EILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLR 468 Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 YRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM V++ Sbjct: 469 YRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKEVLEP 524 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 24/36 (66%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEK 36 M+D++ +RQ PE A++++ + E +L++D++ Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDKQ 36 >gi|205361453|gb|ACI03605.1| dynein microtubule-binding domain (49:47) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 604 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 132/390 (33%), Positives = 204/390 (52%), Gaps = 13/390 (3%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 ++K++E + RN + A+ N + ++ L+ + ++E + S L Sbjct: 200 DMLKRVEPL---RNELQKL--EDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISKL 254 Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 + L+ +P P P+G + R VG P +H + E G + RA++ Sbjct: 255 EALLLQVPLPPWPGAPVGGEEANREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQ 312 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 SG+R L G LA E AL +F D G+T P R++A GTG P + D Sbjct: 313 DSGSRSYALKGDLASYEEALLRFAADFMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQ 371 Query: 219 MFCTTDGR-WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + ++ + T+EV L L+S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R Sbjct: 372 VRAESETDTYTTGTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMR 431 Query: 278 QHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 HQF K E +T E S + +L AEEIL+ L+L YR+V + TGD+G + Sbjct: 432 VHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQV 491 Query: 336 DLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIA 395 D+EV+L + YRE SCS ++Q+RR N RYRDP + +++ +TLN + +A R L Sbjct: 492 DIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAM 550 Query: 396 ILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +LEN+ DG V +P L PYM V++ Sbjct: 551 LLENHQLQDGRVRVPQALIPYM-GKEVLEP 579 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 54/118 (45%), Gaps = 6/118 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR--ILIKKIEDIRARRNSNSAQI 58 M+D++ +RQ PE A++++ + E +L++D+ + ++ E ++ S +I Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDKLKKMVKDQQEAE----KKKVMSQEI 56 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + + + + D + L + P + + ++ V S K+ + + ++ + Sbjct: 57 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVK 114 >gi|302695603|ref|XP_003037480.1| hypothetical protein SCHCODRAFT_13705 [Schizophyllum commune H4-8] gi|300111177|gb|EFJ02578.1| hypothetical protein SCHCODRAFT_13705 [Schizophyllum commune H4-8] Length = 491 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 124/444 (27%), Positives = 211/444 (47%), Gaps = 32/444 (7%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 L+ + I +N + R + + + ++ + + A RN+ S IG+ Sbjct: 37 LNYKNISENVVYKATNAMNRKCGVTLDDVQDVARTHKEVKAVTNQLNALRNTRS-MIGER 95 Query: 62 IA----EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I + + + E + +K+++ LE + + L +L IPN + P+G Sbjct: 96 IRRAAQQKDDKGKEEAMIEATNVKKEIATLEDKLATLEQQLLRLALAIPNDTHPDAPLGP 155 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + + G +P R+H + GL+D + +SG + LT A LE A Sbjct: 156 EDAA-VTLSTHGPEPIPADPRRDHVAFCKKFGLLDLESGATVSGTSWVYLTNEAALLELA 214 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--------TTDGRWLI 229 L + + + HG+T V P +VR + Y G P+ ++ L Sbjct: 215 LTNYALSIAV-RHGFTPVMPPDVVRADVAYRCGFQPRDDQASQIYDVSTPTSSSQDLILA 273 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 T+E+ L +++++I S SLP + + +FR+EAG+ G DTRG+ R HQF K EL ++ Sbjct: 274 GTAEIPLAGMFANKIFPSTSLPRKVVGMGHAFRAEAGARGADTRGLYRVHQFSKVELFAV 333 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T E S M S EIL+ L L RV+ + T +LG SA + D+E W+ G+ + E Sbjct: 334 TDAESSEAMMAEMASIQTEILRGLGLSLRVLDMPTEELGASAYRKTDIEAWMPGRGKWGE 393 Query: 350 ISSCSTCGNFQSRRMNSRYRDPN------------SKSLKFTHTLNGSGVAVGRCLIAIL 397 +SS S C ++QSRR++ RYR + +L F HTLNG+ A+ R ++A++ Sbjct: 394 LSSLSNCTDYQSRRLHIRYRPQALAAAAGTTTPVPAGALPFAHTLNGTAAAIPRLIVALI 453 Query: 398 ENYLNAD--G---SVTIPTVLRPY 416 EN + D G + +P L+P+ Sbjct: 454 ENGITFDEAGEAIGLALPEALKPF 477 >gi|205361451|gb|ACI03604.1| dynein microtubule-binding domain (50:47) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 605 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 132/390 (33%), Positives = 204/390 (52%), Gaps = 13/390 (3%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 ++K++E + RN + A+ N + ++ L+ + ++E + S L Sbjct: 201 DMLKRVEPL---RNELQKL--EDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISKL 255 Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 + L+ +P P P+G + R VG P +H + E G + RA++ Sbjct: 256 EALLLQVPLPPWPGAPVGGEEANREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQ 313 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 SG+R L G LA E AL +F D G+T P R++A GTG P + D Sbjct: 314 DSGSRSYALKGDLASYEEALLRFAADFMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQ 372 Query: 219 MFCTTDGR-WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + ++ + T+EV L L+S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R Sbjct: 373 VRAESETDTYTTGTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMR 432 Query: 278 QHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 HQF K E +T E S + +L AEEIL+ L+L YR+V + TGD+G + Sbjct: 433 VHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQV 492 Query: 336 DLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIA 395 D+EV+L + YRE SCS ++Q+RR N RYRDP + +++ +TLN + +A R L Sbjct: 493 DIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAM 551 Query: 396 ILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +LEN+ DG V +P L PYM V++ Sbjct: 552 LLENHQLQDGRVRVPQALIPYM-GKEVLEP 580 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 57/116 (49%), Gaps = 1/116 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +RQ PE A++++ + E +L++D+K + ++K ++ ++ S +I + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDDKLKKMVKDQQEAE-KKKVMSQEIQE 59 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + + + D + L + P + + ++ V S K+ + + ++ + Sbjct: 60 QLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVK 115 >gi|205361463|gb|ACI03610.1| dynein microtubule-binding domain (21:19) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 548 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 127/358 (35%), Positives = 189/358 (52%), Gaps = 8/358 (2%) Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + L+ +L LE + + L+ L+ +P P P+G + R VG Sbjct: 171 ADMLKRVEPLRNELQKLEDDAKDNQQKLEALLLQVPLPPWPGAPVGGEEANREIKR-VGG 229 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 P +H + E G + RA++ SG+R L G LA E AL +F D Sbjct: 230 PPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGDLASYEEALLRFAADFMA-RR 287 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNLYSHEIIESKS 249 G+T P R++A GTG P + D + ++ + T+EV L L+S EI+ ++ Sbjct: 288 GFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTTGTAEVVLNALHSGEILPYEA 347 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAE 307 LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + +L AE Sbjct: 348 LPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAE 407 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 EIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+RR N R Sbjct: 408 EILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLR 467 Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 YRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM V++ Sbjct: 468 YRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKEVLEP 523 Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 23/36 (63%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEK 36 M+D + +RQ PE A++++ + E +L++D++ Sbjct: 1 MVDQKRLRQEPEVFHRAIREKGVALDLEALLAVDQQ 36 >gi|205361449|gb|ACI03603.1| dynein microtubule-binding domain (51:47) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 606 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 132/390 (33%), Positives = 204/390 (52%), Gaps = 13/390 (3%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 ++K++E + RN + A+ N + ++ L+ + ++E + S L Sbjct: 202 DMLKRVEPL---RNELQKL--EDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISKL 256 Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 + L+ +P P P+G + R VG P +H + E G + RA++ Sbjct: 257 EALLLQVPLPPWPGAPVGGEEANREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQ 314 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 SG+R L G LA E AL +F D G+T P R++A GTG P + D Sbjct: 315 DSGSRSYALKGDLASYEEALLRFAADFMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQ 373 Query: 219 MFCTTDGR-WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + ++ + T+EV L L+S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R Sbjct: 374 VRAESETDTYTTGTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMR 433 Query: 278 QHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 HQF K E +T E S + +L AEEIL+ L+L YR+V + TGD+G + Sbjct: 434 VHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQV 493 Query: 336 DLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIA 395 D+EV+L + YRE SCS ++Q+RR N RYRDP + +++ +TLN + +A R L Sbjct: 494 DIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAM 552 Query: 396 ILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +LEN+ DG V +P L PYM V++ Sbjct: 553 LLENHQLQDGRVRVPQALIPYM-GKEVLEP 581 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 52/116 (44%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +RQ PE A++++ + E +L++D + K + ++ S +I + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDNDKLKKMVKDQQEAEKKKVMSQEIQE 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + + + D + L + P + + ++ V S K+ + + ++ + Sbjct: 61 QLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVK 116 >gi|205361459|gb|ACI03608.1| dynein microtubule-binding domain (23:19) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 550 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 127/358 (35%), Positives = 189/358 (52%), Gaps = 8/358 (2%) Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + L+ +L LE + + L+ L+ +P P P+G + R VG Sbjct: 173 ADMLKRVEPLRNELQKLEDDAKDNQQKLEALLLQVPLPPWPGAPVGGEEANREIKR-VGG 231 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 P +H + E G + RA++ SG+R L G LA E AL +F D Sbjct: 232 PPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGDLASYEEALLRFAADFMA-RR 289 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNLYSHEIIESKS 249 G+T P R++A GTG P + D + ++ + T+EV L L+S EI+ ++ Sbjct: 290 GFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTTGTAEVVLNALHSGEILPYEA 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAE 307 LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + +L AE Sbjct: 350 LPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAE 409 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 EIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+RR N R Sbjct: 410 EILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLR 469 Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 YRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM V++ Sbjct: 470 YRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKEVLEP 525 Score = 44.0 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 27/45 (60%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIE 45 M+D++ +RQ PE A++++ + E +L++D K + +I + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDHKQQEVIADKQ 45 >gi|154284291|ref|XP_001542941.1| seryl-tRNA synthetase [Ajellomyces capsulatus NAm1] gi|150411121|gb|EDN06509.1| seryl-tRNA synthetase [Ajellomyces capsulatus NAm1] Length = 415 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 111/440 (25%), Positives = 187/440 (42%), Gaps = 56/440 (12%) Query: 1 MLDI---------QWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRAR 50 MLDI + I +N E L ++R + + +++L + R + Sbjct: 1 MLDIADFVHGATPEKITENQERLKENQRRRGAPVEAIDEVIALFKLARE--------GEK 52 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 N +IG+ + N L E + L++Q + E + ++ I N Sbjct: 53 INKVQKEIGKK--KKNKEDAADLIAEKTELEKQKKDADAAATEKELLRDQKLASIGNYVH 110 Query: 111 EEVPIGTSANENILIRSV---GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 E+VP +N ++ + K H ++ L D R TK+ G R L Sbjct: 111 EDVPTSQDEADNAILSTWAPEWFKEEKPAYCLSHDDVLHRLDGFDQKRGTKIFGHRGYCL 170 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-- 225 + L AL + ++ YT P + + M T Q+ +F ++++ T+ Sbjct: 171 VNYGLLLNLALVNYGLEF-LFRKKYTLNQPPYFMLKKFMAKTAQLEQFDEELYKVTENED 229 Query: 226 ----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 R+LI TSE L+ L+S E ++ LP+++ + +R EAGS G+ Sbjct: 230 KASERYLIATSEQPLSALHSGEWLQDSDLPIKYAGYSTCYRKEAGSHGQG---------- 279 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 E +T+ EDS+ + M+ +EE + L L YRVV + +G L +A + DLE W Sbjct: 280 ---EQFVMTKPEDSWDAFKDMMKNSEEFYQSLGLPYRVVDIVSGALNNAASRKNDLEAWF 336 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDP-----------NSKSLKFTHTLNGSGVAVG 390 Q Y+E+ SCS C ++Q+R + RYR + + H LN + A Sbjct: 337 PSQGKYKELVSCSNCTDYQTRALEIRYRQKKDLADEKESGADENKKIYVHALNATLCATE 396 Query: 391 RCLIAILENYLNADGSVTIP 410 R L ILENY +V++P Sbjct: 397 RTLCCILENYQTE--TVSLP 414 >gi|205361457|gb|ACI03607.1| dynein microtubule-binding domain (26:19) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 553 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 127/358 (35%), Positives = 189/358 (52%), Gaps = 8/358 (2%) Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + L+ +L LE + + L+ L+ +P P P+G + R VG Sbjct: 176 ADMLKRVEPLRNELQKLEDDAKDNQQKLEALLLQVPLPPWPGAPVGGEEANREIKR-VGG 234 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 P +H + E G + RA++ SG+R L G LA E AL +F D Sbjct: 235 PPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGDLASYEEALLRFAADFMA-RR 292 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLTNLYSHEIIESKS 249 G+T P R++A GTG P + D + ++ + T+EV L L+S EI+ ++ Sbjct: 293 GFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTTGTAEVVLNALHSGEILPYEA 352 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAE 307 LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + +L AE Sbjct: 353 LPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAE 412 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 EIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+RR N R Sbjct: 413 EILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLR 472 Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 YRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM V++ Sbjct: 473 YRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKEVLEP 528 Score = 43.2 bits (100), Expect = 0.086, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 41/87 (47%), Gaps = 16/87 (18%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ +RQ PE A++++ + E +L++D E + ++ + + Q Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVD----------EQLHKQQEVIADK--Q 48 Query: 61 AIAEGNLSLVD----ALKNETSTLKEQ 83 + +L V+ +N ++K+Q Sbjct: 49 MSVKEDLDKVEPAVIEAQNAVKSIKKQ 75 >gi|307128560|ref|YP_003880590.1| seryl-tRNA synthetase [Candidatus Sulcia muelleri CARI] gi|306483022|gb|ADM89892.1| seryl-tRNA synthetase [Candidatus Sulcia muelleri CARI] Length = 342 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 115/288 (39%), Positives = 167/288 (57%), Gaps = 4/288 (1%) Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 H+E+G+ L + +SG F+V A L+R+L Q+ +D + S Sbjct: 52 YNKKNEKILSHWELGKKFNLFSTKIGSIISGNGFNVFINKGALLQRSLIQYFLDKNISS- 110 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKS 249 GY E + P LV+ ++YGTGQIP D M+ D +LIPT EV L N++ H+I + Sbjct: 111 GYIEYALPYLVKKNSVYGTGQIPDKKDQMYNINYDNLYLIPTGEVPLINIFCHKIFKESE 170 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP++ TT FR E+GS G RG+ R HQF K E++ I ++S+ M++ +++ Sbjct: 171 LPIKATTYTSCFRRESGSYGTKVRGLNRLHQFDKVEIIQINTCKNSYFSFNEMVNHIKDL 230 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR 369 L LDL +R++ LC DLGF++ TYD EV+ GQ + E+SS S C NFQS R+ +YR Sbjct: 231 LISLDLPFRIIKLCGNDLGFTSALTYDFEVYSPGQKKWLEVSSVSNCTNFQSNRIKLKYR 290 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 N K +K HTLNGS +A+ R + AI+ENY + + IP VL PYM Sbjct: 291 SYNGK-IKLCHTLNGSSLAIPRIISAIIENYQTKN-YIIIPKVLIPYM 336 >gi|303279198|ref|XP_003058892.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460052|gb|EEH57347.1| predicted protein [Micromonas pusilla CCMP1545] Length = 382 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 102/373 (27%), Positives = 174/373 (46%), Gaps = 16/373 (4%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R+ NPE + + ++R + +++LD K R ++++I N + Sbjct: 1 MLDINLFREDKGGNPELVRESQRRRFARVEDVDDVIALDAKWRDARWELDNINQEFNKAN 60 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 ++ + G D TL E+ LE++E + + L+ I N+ + VP+ Sbjct: 61 KEVSKKKKAG--EDADDAITFVKTLIEKRAALEEDEKRCEAEVNALLVKIGNLVHDSVPV 118 Query: 116 GTSANEN-ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 N + H ++ L + D +R T ++G R L G L Sbjct: 119 SDDEANNAVYRTFGLDTKRTEENLPNHVDLIAMLDIADTERGTDVAGGRGYFLKGAGVLL 178 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----DGRWLI 229 +AL + + + G+T ++ P +R + M Q+ F + ++ + + ++LI Sbjct: 179 NQALINYALTF-LAGRGHTPLATPFFMRKDRMAECAQLADFDEQLYKVSSGEDSEDKYLI 237 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 TSE + + I+ K LP+RF + FR EAGS GRDT G+ R HQF K E Sbjct: 238 ATSEQTCCSYLRKRWIQPKELPMRFAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFIA 297 Query: 290 TREE--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + +S+ E ER++ +E + L + Y VV++ +G+L +A K YDLE W + Sbjct: 298 VSPDGDESWKEMERLIGNSEAFYQSLGIPYNVVNIVSGELNDAAAKKYDLEAWFPSSKTF 357 Query: 348 REISSCSTCGNFQ 360 RE+ SCS C +FQ Sbjct: 358 RELVSCSNCLDFQ 370 >gi|260830029|ref|XP_002609964.1| hypothetical protein BRAFLDRAFT_85921 [Branchiostoma floridae] gi|229295326|gb|EEN65974.1| hypothetical protein BRAFLDRAFT_85921 [Branchiostoma floridae] Length = 382 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 112/360 (31%), Positives = 182/360 (50%), Gaps = 13/360 (3%) Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 L++ + E E+ S L ++ +PN VP+G + L+ VG+KPS + Sbjct: 4 KLRKDFNEASRYETELNSQLYNILLRLPNSCHPSVPVGDESQAR-LVEMVGEKPSFKFVP 62 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 R H E+GE L ++ +SG R L G A L+ AL QF D G+T + P Sbjct: 63 RGHLELGERLDILQLRHLANVSGHRSYYLKGAGALLQHALVQFTQDR-LYRQGFTPLVVP 121 Query: 199 LLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 + G G + A D D L T+EV + +Y ++++ LP Sbjct: 122 DFFYPAILEGCGMMKAGAFDTQIYTLDSTKHDPLCLAGTAEVGIAGMYKDHVLQANQLPQ 181 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED---SFTEHERMLSCAEEI 309 R ++ +R+E S G + G+ R H F K E+ ++T ED S + +S +++ Sbjct: 182 RSFAVSTCYRAETWS-GTEPYGIYRVHHFTKVEMFAVTANEDGTESDRMQQEFVSLQKDL 240 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR 369 L L +R++ + T +LG A + YD+EVW+ G++ + E+SS S C ++QS+R++ RY Sbjct: 241 YSELGLCFRILDMPTQELGLPAHRKYDMEVWMPGRDSFGEVSSASNCTDYQSKRLHIRYE 300 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHIL 429 + LK+ HT+N + AV R +I+ILEN+ DGSV +P L+PYM V+ + L Sbjct: 301 TEQEE-LKYAHTVNATACAVPRLIISILENFQQEDGSVVVPEALQPYMAGKKVLTVQDGL 359 >gi|119576771|gb|EAW56367.1| seryl-tRNA synthetase, isoform CRA_c [Homo sapiens] Length = 447 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 175/374 (46%), Gaps = 21/374 (5%) Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 V +K + E + + E ++ + + + I N+ VPI + + + + Sbjct: 32 KVSQIKKVRLLIDEAILKCDAERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERI 91 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 + H ++ + + ++ ++G+R L G L LE+AL Q+ + Sbjct: 92 WGDCTVRKK-YSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LG 149 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------TDGRWLIPTSEVSL 236 GY + P +R E M Q+ +F ++++ D ++LI TSE + Sbjct: 150 SRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPI 209 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--ED 294 L+ E + + LP+++ L+ FR E GS GRDTRG+ R HQF K E + Sbjct: 210 AALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNK 269 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S+ E M++ AEE + L + Y +V++ +G L +A K DLE W G +RE+ SCS Sbjct: 270 SWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCS 329 Query: 355 TCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 C ++Q+RR+ RY ++F H LN + A R + AILENY G +T+P Sbjct: 330 NCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEK 388 Query: 413 LRPYM--NNLAVIK 424 L+ +M +I Sbjct: 389 LKEFMPPGLQELIP 402 >gi|114558193|ref|XP_513616.2| PREDICTED: seryl-tRNA synthetase isoform 10 [Pan troglodytes] Length = 447 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 175/374 (46%), Gaps = 21/374 (5%) Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 V +K + E + + E ++ + + + I N+ VPI + + + + Sbjct: 32 KVSQIKKVRLLIDEAILKCDAERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERI 91 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 + H ++ + + ++ ++G+R L G L LE+AL Q+ + Sbjct: 92 WGDCTVRKK-YSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LG 149 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------TDGRWLIPTSEVSL 236 GY + P +R E M Q+ +F ++++ D ++LI TSE + Sbjct: 150 SRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPI 209 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--ED 294 L+ E + + LP+++ L+ FR E GS GRDTRG+ R HQF K E + Sbjct: 210 AALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNK 269 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S+ E M++ AEE + L + Y +V++ +G L +A K DLE W G +RE+ SCS Sbjct: 270 SWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCS 329 Query: 355 TCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 C ++Q+RR+ RY ++F H LN + A R + AILENY G +T+P Sbjct: 330 NCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEK 388 Query: 413 LRPYM--NNLAVIK 424 L+ +M +I Sbjct: 389 LKEFMPPGLQELIP 402 >gi|156538777|ref|XP_001607907.1| PREDICTED: similar to CG4938-PA [Nasonia vitripennis] Length = 441 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 109/385 (28%), Positives = 188/385 (48%), Gaps = 24/385 (6%) Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 R+ + I + GN+ V L + K +S IPN+ Sbjct: 65 RDLIAKNILKRKNSGNIDKVLEL---------------HQSLHSQEEFIKELSKIPNLTD 109 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 V IL G +P E ++ L L+ DR ++G+R +L G Sbjct: 110 PNVLEYADNEPCILRVQ-GDQPKYSFEPHEFSQLAAKLRLLRTDRLGPVTGSRSYILLGD 168 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW--- 227 LA LE+AL + + +H + VS P ++ + + G I + + + Sbjct: 169 LAELEQALITYTLKELL-KHNFKLVSVPDILPSQVIERCGLISDGERKLVYVVEPYYGDD 227 Query: 228 --LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 L T+E++L S+ ++ LPL+ ++ +R+E S + RG+ R HQF K E Sbjct: 228 LSLSGTAEMALAYKLSNTVLHENELPLKLAAVSRCYRAEV-SNLLEERGIYRVHQFTKVE 286 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + +++ +S + +++ E++ +L LHY+V+ + +LG A + D+E W+ G+ Sbjct: 287 MFICSKQNESVQIMDEVVAIQEKLFGQLGLHYKVLDMPPNELGSPAYRKIDIEAWMPGRK 346 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E+SSCS C ++Q+RR+N +Y+D N + + +HTLNG+ AV R LIAI E + DG Sbjct: 347 QFGELSSCSNCTDYQARRLNIKYQDKNEQIMH-SHTLNGTACAVPRMLIAICETHQLEDG 405 Query: 406 SVTIPTVLRPYMNNLAVIKKEHILE 430 ++ +P L PYMN VIKK+++ E Sbjct: 406 NIAVPEQLVPYMNGKTVIKKQNVAE 430 >gi|221061331|ref|XP_002262235.1| seryl-trna synthetase [Plasmodium knowlesi strain H] gi|193811385|emb|CAQ42113.1| seryl-trna synthetase, putative [Plasmodium knowlesi strain H] Length = 554 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 144/476 (30%), Positives = 229/476 (48%), Gaps = 63/476 (13%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYIL---SLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + +++N + LKKR ++ + + L E+ L ++R R S ++ Sbjct: 75 LNILKENENKVIENLKKRGMDKNIDNVKILKDLIEEKNKLEVLRNNLRNMRKVLSDRVRN 134 Query: 61 AIAEGNLSL--------------------------------------VDALKNETSTLKE 82 + N + V+ +K + + + E Sbjct: 135 LMFAENATDESATQGRMSDETPLYIDRSKVETEGHNPLEDTPFEEYNVERVKEQINQINE 194 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL----- 137 Q+ I E + + ++ S +PN+ L +VP G N+N +I+ +K Sbjct: 195 QININETKITHLRYKIEDHFSRLPNLLLNKVPEGKKNNKNKIIKMYKRKNIQTDKDNTSI 254 Query: 138 -SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 E F T G +++L ++A LERAL FMI+ H ++ YT V Sbjct: 255 EPHEEILKRFDRNQHIFANITNKIGFGYNILVNNIAKLERALINFMINTHVNKFHYTYVK 314 Query: 197 APLLVRDEAMYGTGQIPKFADDMFCTTDGR-------WLIPTSEVSLTNLYSHEIIESKS 249 P++V A+ TGQ+PKF +D+F D +LIPTSEVSL NL+ + + ++ Sbjct: 315 TPVIVARSALTNTGQLPKFENDLFKINDNYKILNEEAFLIPTSEVSLLNLFRNAHLNFEN 374 Query: 250 LPLRFTTLAPSFRSEAG-SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LP+R + + FR E + G+ ++G+LR+H F K ELV+IT S ++ ++ +E Sbjct: 375 LPIRLVSHSSCFRIEKNFTYGKTSKGLLREHIFEKVELVNITDRRSSHVFYKDLIKHSEY 434 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 ILK+L + YRVV L + + FSA YDLE WL Q + E+SSCS C +FQ+R++N +Y Sbjct: 435 ILKKLKIPYRVVLLNSFETPFSASICYDLEAWLPSQQRFIEVSSCSNCLDFQARKLNLKY 494 Query: 369 RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL------NADGSVTIPTVLRPYMN 418 + +S F HT+NGSG+AVGR L ILE Y N + IP LR +MN Sbjct: 495 KKKDSNF--FCHTINGSGLAVGRVLAIILEQYQIGGNSPNEKKELIIPKPLRKFMN 548 >gi|240995609|ref|XP_002404629.1| seryl-tRNA synthetase, putative [Ixodes scapularis] gi|215491631|gb|EEC01272.1| seryl-tRNA synthetase, putative [Ixodes scapularis] Length = 431 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 109/431 (25%), Positives = 181/431 (41%), Gaps = 58/431 (13%) Query: 2 LDIQWIRQ--NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 LDI++ N ++ L +R E + + Sbjct: 32 LDIEFYCNPQNRHVIEENLNRRGYEADLDQL----------------------------- 62 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 S L ++L + + + L + ++ +PN +V + Sbjct: 63 ------------------SKLWDELKVKPESNERLRLDLLRAVARLPNATHPDVL-ANAT 103 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFD-RATKLSGARFSVLTGHLAHLERAL 178 + + +VG+KP+ + R + +GL D L G R L G LAHLE+AL Sbjct: 104 GNPVTVETVGEKPAFDFVPRRFEVLMNKMGLFQADPNYNVLCGERTYFLRGDLAHLEQAL 163 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW-----LIPTSE 233 + D G+T V+ P ++ + + G W L TSE Sbjct: 164 VHYTFDRLLGL-GFTPVTVPDVLHPDDLEACGMATTGQRSQVYRLKTHWGTEACLSGTSE 222 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +SL NLY + + S LP++ +++ +R+E S + +G+ R H F K E+ I Sbjct: 223 MSLANLYRDQCLTSTDLPIKMVSVSRCYRAEISSV-KSEKGLFRVHAFNKVEMFGIAPPG 281 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 S E ++ L LH+ V+ + DLG A + +D+E W+ G Y EISS Sbjct: 282 QSDALLEEFAQIQCDLFTSLGLHFMVLDMPPSDLGQPAYRKFDIEAWMPGHRAYGEISSA 341 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C ++QSRR+ R+ ++ + T NG+ AV R LIA++E+ D SV IP VL Sbjct: 342 SDCTDYQSRRLGITCRESLGETPRHVSTANGTACAVPRMLIALVESNQQKDNSVLIPEVL 401 Query: 414 RPYMNNLAVIK 424 + YM +V++ Sbjct: 402 QSYMGGRSVME 412 >gi|156103129|ref|XP_001617257.1| seryl-tRNA synthetase [Plasmodium vivax SaI-1] gi|148806131|gb|EDL47530.1| seryl-tRNA synthetase, putative [Plasmodium vivax] Length = 548 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 150/475 (31%), Positives = 237/475 (49%), Gaps = 62/475 (13%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYIL---SLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + ++ N + LKKR +E + L E+ L ++R RR S ++ + Sbjct: 70 LNILKTNENKVIENLKKRGMEKNINNVQMLKDLIEEKNQLEMLRNNLRNRRKVLSDRVKK 129 Query: 61 A---------------IAEG----------------------NLSLVDALKNETSTLKEQ 83 ++EG V+ +K E + + EQ Sbjct: 130 LLFAQNATVASAPQGGMSEGTPCMDSREVKMERRHPQKDTHFEERNVEQVKKEINQINEQ 189 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL------ 137 + I E + + + +++ S +PN+ L +VP G + N N +++ K + Sbjct: 190 ININETKITHLRNKIEEHFSRLPNLLLSKVPEGKTHNGNKVVKMYKMKEVQMDKSNTSIE 249 Query: 138 SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 E FD T G ++VL ++A LERAL FMI+ H ++ YT V A Sbjct: 250 PHEEILKKFDNNQHIFDNITNKIGFGYNVLVNNIAKLERALIHFMINTHVNKFQYTYVKA 309 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTTDGR-------WLIPTSEVSLTNLYSHEIIESKSL 250 P++V A+ TGQ+PKF +D+F + +LIPTSEVSL NL+ + ++S++L Sbjct: 310 PVIVARSALTNTGQLPKFENDLFKINNNYKILNEEAFLIPTSEVSLLNLFRNAHLDSENL 369 Query: 251 PLRFTTLAPSFRSEAG-SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 P+R + + FR E + G+ ++G+LR+H F K ELV+IT + S ++ ++ +E I Sbjct: 370 PIRLVSHSSCFRIEKNFTYGKASKGLLREHIFEKVELVNITDRKTSHLFYKNLIKHSEYI 429 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR 369 LK+L + YRVV L + + FSA YDLE WL Q + E+SSCS C +FQ+R++N +Y+ Sbjct: 430 LKKLKIPYRVVLLNSFETPFSASICYDLEAWLPSQQRFVEVSSCSNCLDFQARKLNLKYK 489 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYL------NADGSVTIPTVLRPYMN 418 +S F HT+NGSG+AVGR L ILE Y N + IP LR +MN Sbjct: 490 KKDSNF--FCHTINGSGLAVGRVLAIILEQYQMGGTSPNEKKQLIIPKPLRKFMN 542 >gi|221106336|ref|XP_002157171.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 372 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 91/300 (30%), Positives = 151/300 (50%), Gaps = 18/300 (6%) Query: 141 HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 H ++ + +D++R ++G R L G L++AL + GYT + P Sbjct: 39 HVDLLAMIDGVDYERGANVAGNRGYFLKGPGVLLQQALINLALQT-LVGSGYTPIYTPFF 97 Query: 201 VRDEAMYGTGQIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESK 248 +R E M Q+ +F ++++ + ++LI TSE + + E + + Sbjct: 98 MRKEVMQEVAQLSQFDEELYKVVGKGSERDDDTAVEEKYLIATSEQPIAAFHRGEWMSTS 157 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCA 306 LP ++ ++ FR E G GRDTRG+ R HQF K E I +S+ + M++ A Sbjct: 158 DLPKKYAGISSCFRQEVGCHGRDTRGIFRVHQFEKVEQFVICSPHDNESWKHLDEMVNNA 217 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 E+ + L++ YR+V + +G L +A K DLE W G +RE+ SCS C ++Q+RR+ Sbjct: 218 EKFYQALNIPYRIVGIVSGALNNAAAKKLDLEAWFPGSGAFRELCSCSNCTDYQARRLLV 277 Query: 367 RYRDPN--SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 RY + +F H LN + A R + ILEN +G + +P +LRP+M N+ IK Sbjct: 278 RYGQTKKMNDKTEFCHMLNATMCASTRVICCILENNQTEEG-IIVPELLRPFMGNVEFIK 336 >gi|205361426|gb|ACI03596.1| dynein microtubule-binding domain (96:96) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 700 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 135/438 (30%), Positives = 212/438 (48%), Gaps = 33/438 (7%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AE 64 LK+ +EP + L++ + +K ++ A I + A+ Sbjct: 245 YADMLKR--VEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQ 302 Query: 65 GNLSLVDALKNET-------STLKEQLPILEKEEHEVCSSL-------KKLISCIPNVPL 110 + + A++ + +L + EK + + + L+ +P P Sbjct: 303 AIKADLAAVEAKVNRSTALLKSLSAERERWEKTSETFKNQMSTIAGKLEALLLQVPLPPW 362 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 P+G + R VG P +H + E G + RA++ SG+R L G Sbjct: 363 PGAPVGGEEANREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGD 420 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLI 229 LA E AL +F D G+T P R++A GTG P + D + ++ + Sbjct: 421 LASYEEALLRFAADFMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTT 479 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 T+EV L L+S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E + Sbjct: 480 GTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVL 539 Query: 290 TRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 T E S + +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + Y Sbjct: 540 TEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRY 599 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 RE SCS ++Q+RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V Sbjct: 600 RETHSCSALLDWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRV 658 Query: 408 TIPTVLRPYMNNLAVIKK 425 +P L PYM V++ Sbjct: 659 RVPQALIPYM-GKEVLEP 675 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 85/234 (36%), Gaps = 30/234 (12%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEK------------------------ 36 M+D++ +RQ PE A++++ + E +L++D + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDSELEEQQMHLNVGLRKIKETVDQVEE 60 Query: 37 -NRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 R L K +++ +N+ + + + + + + K + ++EQL ++ + Sbjct: 61 LRRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEIQEQLHKQQEVIADKQ 118 Query: 96 SSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 S+K+ + + +E + +RS+ P+A+ L+ E + D+ Sbjct: 119 MSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTTDW 178 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 + + R + + + + + + + +V ++ Sbjct: 179 KQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLA 231 >gi|205361422|gb|ACI03595.1| dynein microtubule-binding domain (98:96) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 702 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 135/438 (30%), Positives = 212/438 (48%), Gaps = 33/438 (7%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AE 64 LK+ +EP + L++ + +K ++ A I + A+ Sbjct: 247 YADMLKR--VEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQ 304 Query: 65 GNLSLVDALKNET-------STLKEQLPILEKEEHEVCSSL-------KKLISCIPNVPL 110 + + A++ + +L + EK + + + L+ +P P Sbjct: 305 AIKADLAAVEAKVNRSTALLKSLSAERERWEKTSETFKNQMSTIAGKLEALLLQVPLPPW 364 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 P+G + R VG P +H + E G + RA++ SG+R L G Sbjct: 365 PGAPVGGEEANREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGD 422 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLI 229 LA E AL +F D G+T P R++A GTG P + D + ++ + Sbjct: 423 LASYEEALLRFAADFMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTT 481 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 T+EV L L+S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E + Sbjct: 482 GTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVL 541 Query: 290 TRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 T E S + +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + Y Sbjct: 542 TEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRY 601 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 RE SCS ++Q+RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V Sbjct: 602 RETHSCSALLDWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRV 660 Query: 408 TIPTVLRPYMNNLAVIKK 425 +P L PYM V++ Sbjct: 661 RVPQALIPYM-GKEVLEP 677 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 86/236 (36%), Gaps = 32/236 (13%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEK------------------------ 36 M+D++ +RQ PE A++++ + E +L++D++ Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDKRSELEEQQMHLNVGLRKIKETVDQV 60 Query: 37 ---NRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 R L K +++ +N+ + + + + + + K + ++EQL ++ + Sbjct: 61 EELRRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEIQEQLHKQQEVIAD 118 Query: 94 VCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 S+K+ + + +E + +RS+ P+A+ L+ E + Sbjct: 119 KQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTT 178 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 D+ + + R + + + + + + + +V ++ Sbjct: 179 DWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLA 233 >gi|195328763|ref|XP_002031081.1| GM24223 [Drosophila sechellia] gi|194120024|gb|EDW42067.1| GM24223 [Drosophila sechellia] Length = 417 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 103/353 (29%), Positives = 181/353 (51%), Gaps = 5/353 (1%) Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 KN ++ + L+ + L+ + +PN + + + P Sbjct: 54 KNNVPLIRSLIQELDAGDQHKLRQLQAELEQLPNATHPRLREYGEEPRELAQYVHRQLPP 113 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 +E E+ AL L D +G + LTG LA LE+A+ Q+ + T +HG+ Sbjct: 114 QS-SLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVT-DHGFK 171 Query: 194 EVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 +S P ++ E + G + ++ G L TSE++L ++++++ LPL Sbjct: 172 LISVPDILPKEVIESCGMRTEGERTQVYKLDTGECLSGTSEMALAGFFANKLLSEDQLPL 231 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 + T ++ +R+E S ++ +G+ R HQF K E+ +I E S E E + ++ +R Sbjct: 232 KVTAVSRCYRAE-TSGLQEEKGIYRVHQFNKVEMFAICTAEQSEAELEEFKNIEIDLFRR 290 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 L L++R++ + +LG A + YD+E W+ G+ ++ EISSCS C ++Q+RR+ RYR Sbjct: 291 LGLNFRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSA 350 Query: 373 SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 + HT+NG+ A+ R LIA+LE+Y DG + IP VLRP+M+N +I + Sbjct: 351 DGQILHAHTINGTATAIPRLLIALLESYQREDG-IEIPAVLRPFMDNQELITR 402 >gi|205361414|gb|ACI03594.1| dynein microtubule-binding domain (99:96) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 703 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 135/438 (30%), Positives = 212/438 (48%), Gaps = 33/438 (7%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AE 64 LK+ +EP + L++ + +K ++ A I + A+ Sbjct: 248 YADMLKR--VEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQ 305 Query: 65 GNLSLVDALKNET-------STLKEQLPILEKEEHEVCSSL-------KKLISCIPNVPL 110 + + A++ + +L + EK + + + L+ +P P Sbjct: 306 AIKADLAAVEAKVNRSTALLKSLSAERERWEKTSETFKNQMSTIAGKLEALLLQVPLPPW 365 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 P+G + R VG P +H + E G + RA++ SG+R L G Sbjct: 366 PGAPVGGEEANREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGD 423 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLI 229 LA E AL +F D G+T P R++A GTG P + D + ++ + Sbjct: 424 LASYEEALLRFAADFMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTT 482 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 T+EV L L+S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E + Sbjct: 483 GTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVL 542 Query: 290 TRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 T E S + +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + Y Sbjct: 543 TEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRY 602 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 RE SCS ++Q+RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V Sbjct: 603 RETHSCSALLDWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRV 661 Query: 408 TIPTVLRPYMNNLAVIKK 425 +P L PYM V++ Sbjct: 662 RVPQALIPYM-GKEVLEP 678 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 31/235 (13%), Positives = 85/235 (36%), Gaps = 29/235 (12%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKN-----------------RILIKK 43 M+D++ +RQ PE A++++ + E +L++DEK + + + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDEKRSELEEQQMHLNVGLRKIKETVDQ 60 Query: 44 IEDIRARRNSNSAQI--------GQAIA-EGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 +E++R S ++ + + + K + ++EQL ++ + Sbjct: 61 VEELRRDLRIKSQELEVKNAAANDKLKKMVKDQQEAEKKKVMSQEIQEQLHKQQEVIADK 120 Query: 95 CSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 S+K+ + + +E + +RS+ P+A+ L+ E + D Sbjct: 121 QMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTTD 180 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 + + + R + + + + + + + +V ++ Sbjct: 181 WKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLA 234 >gi|205361403|gb|ACI03592.1| dynein microtubule-binding domain (103:96) fused with seryl-tRNA synthetase-monomer [synthetic construct] Length = 707 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 135/438 (30%), Positives = 212/438 (48%), Gaps = 33/438 (7%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AE 64 LK+ +EP + L++ + +K ++ A I + A+ Sbjct: 252 YADMLKR--VEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQ 309 Query: 65 GNLSLVDALKNET-------STLKEQLPILEKEEHEVCSSL-------KKLISCIPNVPL 110 + + A++ + +L + EK + + + L+ +P P Sbjct: 310 AIKADLAAVEAKVNRSTALLKSLSAERERWEKTSETFKNQMSTIAGKLEALLLQVPLPPW 369 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 P+G + R VG P +H + E G + RA++ SG+R L G Sbjct: 370 PGAPVGGEEANREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGD 427 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLI 229 LA E AL +F D G+T P R++A GTG P + D + ++ + Sbjct: 428 LASYEEALLRFAADFMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTT 486 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 T+EV L L+S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E + Sbjct: 487 GTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVL 546 Query: 290 TRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 T E S + +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + Y Sbjct: 547 TEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRY 606 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 RE SCS ++Q+RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V Sbjct: 607 RETHSCSALLDWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRV 665 Query: 408 TIPTVLRPYMNNLAVIKK 425 +P L PYM V++ Sbjct: 666 RVPQALIPYM-GKEVLEP 682 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 31/239 (12%), Positives = 85/239 (35%), Gaps = 33/239 (13%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLD----EKN-----------------RI 39 M+D++ +RQ PE A++++ + E +L++D EK + Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDNLFHEKRSELEEQQMHLNVGLRKIKE 60 Query: 40 LIKKIEDIRARRNSNSAQI--------GQAIA-EGNLSLVDALKNETSTLKEQLPILEKE 90 + ++E++R S ++ + + + K + ++EQL ++ Sbjct: 61 TVDQVEELRRDLRIKSQELEVKNAAANDKLKKMVKDQQEAEKKKVMSQEIQEQLHKQQEV 120 Query: 91 EHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 + S+K+ + + +E + +RS+ P+A+ L+ E + Sbjct: 121 IADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGE 180 Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 D+ + + R + + + + + + + +V ++ Sbjct: 181 STTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLA 238 >gi|205361410|gb|ACI03593.1| dynein microtubule-binding domain (100:96) fused to seryl-tRNA synthase-monomer [synthetic construct] Length = 704 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 135/438 (30%), Positives = 212/438 (48%), Gaps = 33/438 (7%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AE 64 LK+ +EP + L++ + +K ++ A I + A+ Sbjct: 249 YADMLKR--VEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQ 306 Query: 65 GNLSLVDALKNET-------STLKEQLPILEKEEHEVCSSL-------KKLISCIPNVPL 110 + + A++ + +L + EK + + + L+ +P P Sbjct: 307 AIKADLAAVEAKVNRSTALLKSLSAERERWEKTSETFKNQMSTIAGKLEALLLQVPLPPW 366 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 P+G + R VG P +H + E G + RA++ SG+R L G Sbjct: 367 PGAPVGGEEANREIKR-VGGPPEFSFPPLDHVALMEKNGWWEP-RASQDSGSRSYALKGD 424 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLI 229 LA E AL +F D G+T P R++A GTG P + D + ++ + Sbjct: 425 LASYEEALLRFAADFMA-RRGFTPADTPSRAREKAFLGTGHFPAYRDQVRAESETDTYTT 483 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 T+EV L L+S EI+ ++LPLR+ AP+FRSEAGS G+D RG++R HQF K E + Sbjct: 484 GTAEVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVL 543 Query: 290 TRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 T E S + +L AEEIL+ L+L YR+V + TGD+G + D+EV+L + Y Sbjct: 544 TEASLEASDRAFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRY 603 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 RE SCS ++Q+RR N RYRDP + +++ +TLN + +A R L +LEN+ DG V Sbjct: 604 RETHSCSALLDWQARRANLRYRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRV 662 Query: 408 TIPTVLRPYMNNLAVIKK 425 +P L PYM V++ Sbjct: 663 RVPQALIPYM-GKEVLEP 679 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 85/236 (36%), Gaps = 30/236 (12%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKK----------------- 43 M+D++ +RQ PE A++++ + E +L++D + R +++ Sbjct: 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLAVDHEKRSELEEQQMHLNVGLRKIKETVD 60 Query: 44 -IEDIRARRNSNSAQI--------GQAIA-EGNLSLVDALKNETSTLKEQLPILEKEEHE 93 +E++R S ++ + + + K + ++EQL ++ + Sbjct: 61 QVEELRRDLRIKSQELEVKNAAANDKLKKMVKDQQEAEKKKVMSQEIQEQLHKQQEVIAD 120 Query: 94 VCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 S+K+ + + +E + +RS+ P+A+ L+ E + Sbjct: 121 KQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTT 180 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 D+ + + R + + + + + + + +V ++ Sbjct: 181 DWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLA 235 >gi|156042898|ref|XP_001588006.1| hypothetical protein SS1G_11248 [Sclerotinia sclerotiorum 1980] gi|154695633|gb|EDN95371.1| hypothetical protein SS1G_11248 [Sclerotinia sclerotiorum 1980 UF-70] Length = 506 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 129/461 (27%), Positives = 212/461 (45%), Gaps = 37/461 (8%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +DI+ IR +PE + + +R+ + QS I+SL EK + +R R N Q+ Sbjct: 47 IDIKHIRTHPELYEKSCIERNYKLQSTYPAKIISLFEKWHEHQRDGRALRERNNKLKLQL 106 Query: 59 G--QAIAEGNLSLV--------DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 +++ + + + E +LK+++ +E E + + + L S IPN+ Sbjct: 107 ANPKSLRNDDSEEAQSLRALSKEEIIAEARSLKDKISQIESSETALMTEINTLASAIPNL 166 Query: 109 PLEEVPIGTSANEN--ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 + P G+ I S+ + R H IG L L+DF A SG + Sbjct: 167 TSDSTPRGSEPKVIGTINEHPEPVPSSSDRVWRSHVHIGSELNLLDFSSAATTSGWGWYY 226 Query: 167 LTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD--------- 217 L A LE+AL Q+ + L ++ VS P ++ G P+ Sbjct: 227 LLNGAALLEQALIQYSLSLAL-SKKWSIVSPPTMIYSHIASACGFQPRDQSGEQQIYSIA 285 Query: 218 ----DMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 D L T+E+ L + + I LPL+ + +R+EAG+ G DT+ Sbjct: 286 QTPSDTESGKPTYSLAGTAEIPLAGMKADSTIHESQLPLKTIATSRCYRAEAGARGIDTK 345 Query: 274 GMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 G+ R H+F K E+ + T E + MLS EIL L+LH R++ + + DLG SA Sbjct: 346 GLYRVHEFTKVEMFAWTLPTLESTTEIFNEMLSLQIEILTSLNLHCRILEMPSTDLGASA 405 Query: 332 CKTYDLEVWLAGQ----NLYREISSCSTCGNFQSRRMNSRYR-DPNSKSLKFTHTLNGSG 386 + D+E + + + + E++S S CG++QSRR+ ++ N + F T+NG+ Sbjct: 406 MRKLDIEAFFPSRRERDDGWGEVTSLSICGDYQSRRLATKVDIAANGGKVAFPWTVNGTA 465 Query: 387 VAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVIKKE 426 VAV R + AILEN + + V +P L P+M V+KKE Sbjct: 466 VAVPRVVAAILENGWDEERKEVRVPECLWPWMGGRKVLKKE 506 >gi|238581344|ref|XP_002389579.1| hypothetical protein MPER_11273 [Moniliophthora perniciosa FA553] gi|215451998|gb|EEB90509.1| hypothetical protein MPER_11273 [Moniliophthora perniciosa FA553] Length = 487 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 123/441 (27%), Positives = 210/441 (47%), Gaps = 30/441 (6%) Query: 2 LDIQWIRQNPEHLDIALK--KRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 L+ + I +N + ++ R E ++ L ++ R + +K++ R R+ Sbjct: 37 LNYKDIAEN--SVYKSINALNRKAPLPTDGVESVVRLYKEFRTVKQKLDAKRNERSVIGE 94 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 I + + A LKE + LE + + + +L +PN P+G Sbjct: 95 TIERCAKSKDADGKAAALRTAKDLKEAIFELEIAASRIENEMLELALVVPNDTHPSSPLG 154 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + + G +R+H I L L+DF+ +K++G+ + L A LE Sbjct: 155 PETAA-VTLDIRGPSSLPADSNRDHATIARKLDLIDFESGSKVTGSSWYYLMNEAAVLEM 213 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD----------DMFCTTDGR 226 AL + + + + GYT V+ P +VR + G P+ + Sbjct: 214 ALTNYALSVAIRD-GYTPVTTPDVVRSDIARRCGFQPRDHSVPPVSQAYHLQSTSSYSDL 272 Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 L TSE+ L ++++ + +S S PL+ + +FR+EAG++G DTRG+ R HQF K EL Sbjct: 273 ILAATSEIPLAGMFANRLYKSPSFPLKVVGVGHAFRAEAGASGTDTRGIYRVHQFTKVEL 332 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 ++T E+S E M ++IL L + YRV+ + T +LG SA + YD+E W+ G+ Sbjct: 333 FTVTTSEESEEMMEGMRVVQQDILDGLRIPYRVLDMPTEELGASAYRKYDMEAWMPGRGG 392 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNS------KSLKFTHTLNGSGVAVGRCLIAILENY 400 + E+ S S C ++Q+RR++ RY P F HTLNG+ A+ R ++A+LEN Sbjct: 393 WGEVMSLSNCTDYQARRLHIRYTTPKEPSISVPSPTLFAHTLNGTAAAIPRLIVALLENG 452 Query: 401 --LNADG---SVTIPTVLRPY 416 LN G + +P+ LRP+ Sbjct: 453 VQLNEAGEPIGLVLPSALRPF 473 >gi|198452048|ref|XP_001358602.2| GA18540 [Drosophila pseudoobscura pseudoobscura] gi|198131765|gb|EAL27743.2| GA18540 [Drosophila pseudoobscura pseudoobscura] Length = 418 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 111/398 (27%), Positives = 194/398 (48%), Gaps = 41/398 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNS---NSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 LDE R + ++R RN+ I +A G+ S+ L+ E L Sbjct: 42 QLDELERNV-----ELRHHRNNVPLIRKLI-EASVRGDRSVEQQLEEELGQL-------- 87 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 PN + + + P +E E+ AL Sbjct: 88 -----------------PNATHPRLLDYGDQPRELAQHVHREMP---PKPKEFSELARAL 127 Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 L D +G + LTGHLA LE+A+ Q+ + T +HG+ +S P ++ E + Sbjct: 128 NLYRMDHLGNYTGHKSYYLTGHLATLEQAIIQYALQSVT-KHGFRLISVPDILPKEVIES 186 Query: 209 TGQIPKFA-DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 G + ++ G L TSE++L ++++++ + LPL+ T ++ +R+E S Sbjct: 187 CGMRTEGERTQVYKLDTGECLSGTSEMALAGFFANKVLPEEELPLKVTAVSRCYRAE-TS 245 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 ++ +G+ R HQF K E+ +I S E E + ++ K+L +++R++ + +L Sbjct: 246 GLQEEKGIYRVHQFTKVEMFAICTPTQSEAELEEFKNIEVDLFKQLGINFRLLDMPPCEL 305 Query: 328 GFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGV 387 G A + YD+E W+ G+ ++ EISSCS C ++Q++R++ +YR + ++ HT+NG+ Sbjct: 306 GAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQAKRLSVKYRRSSDGQVQHAHTINGTAT 365 Query: 388 AVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 A+ R LIA+LE+Y D SV IPTVLRP+M+ I + Sbjct: 366 AIPRLLIALLESYQKGD-SVEIPTVLRPFMDGQEFIAR 402 >gi|50546038|ref|XP_500550.1| YALI0B05918p [Yarrowia lipolytica] gi|49646416|emb|CAG82781.1| YALI0B05918p [Yarrowia lipolytica] Length = 470 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 116/425 (27%), Positives = 206/425 (48%), Gaps = 23/425 (5%) Query: 13 HLDIALKKRHLEPQ----SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + A++ R L E + S ++ R +K ++ R ++ S I A + Sbjct: 51 IIREAIQ-RQLPEDTISQLERLESAYQQYRECTQKYDEARHKQRKVSDAIKVA------T 103 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 AL E S K+ + ++ + E ++L L+ +PNV VP G ++ Sbjct: 104 DKKALAQEASEAKKHMKAMDLNQREAIATLNSLMELVPNVIHSTVPQGDDVEVLEILNPD 163 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 + S + H+EIG +L L+D + SG + L G A LE+AL +++D Sbjct: 164 RQYKSDVG----HYEIGHSLNLLDTKTSANTSGYGWYYLLGQGAQLEQALVAYVLD-KAR 218 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF----ADDMFCTTDGRWLIPTSEVSLTNLYSHEI 244 G+ V+ P ++R + G P+ L T+E+ L + + Sbjct: 219 VSGWMTVAPPTIIRKSVAHACGFKPRDVGGEKQIYAIEDQDHCLAGTAEIPLAAWAADKS 278 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV-SITREEDSFTEHERML 303 + S P++ + ++ S+R+EAG+ G DT+G+ R H+F K EL E + E ML Sbjct: 279 FKYTSDPVKVSGVSRSYRAEAGARGADTKGLYRVHEFTKVELFAWTISPESADAILEDML 338 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRR 363 + + ++ L L RV+++ +LG+ A K YD+E WL G+ + EI+S S C ++QSRR Sbjct: 339 AFQKSVVVDLGLKARVLNMPAFELGYPAAKKYDIEAWLPGRGDWGEITSTSNCLDYQSRR 398 Query: 364 MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE-NYLNADGSVTIPTVLRPYMNNLAV 422 +++ ++ ++K + + TLNG+ +AV R + AI E NY ++ +P VL+ YM + Sbjct: 399 LHTTFKLRDAKKV-YAQTLNGTALAVPRVIAAICESNYDPETKTIAVPEVLQKYMGGVTS 457 Query: 423 IKKEH 427 I + Sbjct: 458 IGSQD 462 >gi|170085533|ref|XP_001873990.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651542|gb|EDR15782.1| predicted protein [Laccaria bicolor S238N-H82] Length = 490 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 123/442 (27%), Positives = 214/442 (48%), Gaps = 31/442 (7%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 ++ + I +N + R I S+ + ++ A+RN S +G+ Sbjct: 37 INYRDISENVTSKSLNALNRKARIPHNAIASVARAYNECKRISNELNAKRNIRS-MVGER 95 Query: 62 IAEG-NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 I N + + ++ E + LK ++ LE + H IPN P+G + Sbjct: 96 IRSSSNDAEKENIRAEATKLKTEVKELEAQLHLAEQECLHFALSIPNDTHPSAPLGPESA 155 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 L PS + R+H + + GL+D + + ++G+ + L A LE AL Sbjct: 156 AVTLAEYGHAIPS--NPQRDHVTVCQKFGLLDLESGSTVTGSSWYFLKNEAALLELALTN 213 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD-----------MFCTTDGRWLI 229 + + + +HG+T V+AP +VR + G P+ D ++ L Sbjct: 214 YAMSIAL-KHGFTPVTAPDVVRSDIALRCGFQPRDDSDPPVSHMYHISSTHPSSPELVLS 272 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 TSE+ L ++++++ S +LPL+ + +FR+EAG+ DTRG+ R HQF K EL ++ Sbjct: 273 GTSEIPLAGMFANKVFSSLALPLKVVGVGHAFRAEAGARSADTRGLYRVHQFTKVELFTV 332 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 T E +S E M++ + IL+ L + +R++ + T +LG SA + YD+E W+ G+ + E Sbjct: 333 TAEGESEAMMEEMMTIQKSILQGLGIPFRILDMPTPELGASAYRKYDMEAWMPGRGGWGE 392 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSK----------SLKFTHTLNGSGVAVGRCLIAILEN 399 ++S S C ++QSRR++ RYR S L F HTLNG+ A+ R ++A+LEN Sbjct: 393 VTSLSNCTDYQSRRLHIRYRPQGSSHQGEPSPTPARLPFAHTLNGTAAAIPRLIVALLEN 452 Query: 400 YLNADG-----SVTIPTVLRPY 416 D + +PT L+P+ Sbjct: 453 GAILDDAGEITGIRLPTALKPF 474 >gi|45198930|ref|NP_985959.1| AFR412Cp [Ashbya gossypii ATCC 10895] gi|44984959|gb|AAS53783.1| AFR412Cp [Ashbya gossypii ATCC 10895] Length = 439 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 105/405 (25%), Positives = 190/405 (46%), Gaps = 21/405 (5%) Query: 27 SEYILSLDEKNRILIK---KIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 + L E+ + + + ++ +++RR A++ + + + LK + L + Sbjct: 48 ISRLQELPERQKEVAQIDGEVRVVQSRRKVLEAEMAAGMHRAAGAELKMLKQKYQALATR 107 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 L +E + P E I + EH + Sbjct: 108 AKALREEIRAT--CEDLPNLLDQSTPHSEPEI--------VEWLNPLPEYRADARCEHHD 157 Query: 144 IGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRD 203 + L+DF A +++G+ + L A LE AL + + G++ P + R Sbjct: 158 VMVRKKLVDFQAAAEVTGSSWYYLINEGAMLEHALVSYAT-RKARQWGFSLCMPPSIARS 216 Query: 204 EAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 E + G P+ +D L T+E+ L L + ++ S P ++ Sbjct: 217 EVIAACGFRPRDQNDEQQIYAIEGSNLGLTATAEIPLAGLGLNRTLDLAS-PRALCGVSR 275 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRV 319 S+R+EAG+ GRDT+G+ R H+F K EL + DS E++ + E++ L L +V Sbjct: 276 SYRAEAGARGRDTKGLYRVHEFTKVELFYWAKPADSAALLEKLRAFQTELISELGLSAKV 335 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFT 379 +++ DLG A K YD+EVW+ G+ + E+SS S C +FQSRR+++R+ + ++ L + Sbjct: 336 LNMPANDLGAPAFKKYDIEVWMRGRGSFGEVSSASNCTDFQSRRLSTRFVN-DAGDLDYP 394 Query: 380 HTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVI 423 HTLNG+ +AV R ++AI+EN+ + + + IP L+PYM+ + I Sbjct: 395 HTLNGTAMAVPRVIVAIVENFYDPETDRIRIPDPLQPYMDGMQYI 439 >gi|195501338|ref|XP_002097755.1| GE24299 [Drosophila yakuba] gi|194183856|gb|EDW97467.1| GE24299 [Drosophila yakuba] Length = 417 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 106/353 (30%), Positives = 184/353 (52%), Gaps = 5/353 (1%) Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 +N ++ + LE E S L+ + +PN + + + P Sbjct: 54 RNNVPQIRSLIQELEAGEQHKLSQLQAELEQLPNATHPRLQDYGEEPRELAQYVHRQLPP 113 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 +E E+ AL L D +G + LTG LA LE+A+ Q+ + T +HG+ Sbjct: 114 QS-TLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVT-DHGFK 171 Query: 194 EVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 +S P ++ E + G + ++ G L TSE++L +S++++ + LP+ Sbjct: 172 LISVPDILPKEVIESCGMRTEGERTQVYKLDTGECLSGTSEMALAGFFSNKLLSEEQLPM 231 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 + T ++ +R+E S ++ +G+ R HQF K E+ +I EE S E E + ++ +R Sbjct: 232 KVTAVSRCYRAE-TSGLQEEKGIYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRR 290 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 L L++R++ + +LG A + YD+E W+ G+ ++ EISSCS C ++Q+RR+ RYR Sbjct: 291 LGLNFRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSV 350 Query: 373 SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 + HT+NG+ A+ R LIA+LE+Y DG + IP VLRP+M++ VI + Sbjct: 351 DGKILHAHTINGTATAIPRLLIALLESYQREDG-IEIPAVLRPFMDDQEVITR 402 >gi|327356261|gb|EGE85118.1| seryl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 580 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 120/514 (23%), Positives = 205/514 (39%), Gaps = 91/514 (17%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IR+N R+ ++ I L ++ L + + + + + I Sbjct: 65 DIKHIRENAALYSQNCIDRNYHDLAQYPYEIQRLSAESHELQVALREPQRKIKQIESAIA 124 Query: 60 QAIAEG------NLSLVDALKNETST-----------LKEQLPILEKEEHEVCSSLKKLI 102 + + + K + LK+Q L +++L Sbjct: 125 KLRKDSSDSCNADPEEKQKQKTKVEEELSTLRLSAQHLKDQSHHLTTTRAAHAKEIERLG 184 Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSA-IHLSREHFEIGEALGLMDFDRATKLSG 161 +PN+ E P G I P+ + H IG AL L++F A+ SG Sbjct: 185 LSLPNLTSPETPPGAEPRVVNYINYDPNSPANLPTHTTSHVTIGTALNLLNFASASHASG 244 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 + LT A LE+AL Q+ + + G+ VS P LV + G P+ A + Sbjct: 245 WGWYYLTNEAALLEQALIQYALRVAL-RRGWQAVSPPSLVYSHIAHACGFQPRDAHNEQQ 303 Query: 222 TTDG-------------RWLIPTSEVSLTNLYSHEII----ESKSLPLRFTTLAPSFRSE 264 R L T+E+ L +++ + I + LP++ ++ FR+E Sbjct: 304 IYHIEQSERDVARGRPGRCLAGTAEIPLAAMFAGQEIGGKGKESQLPMKMVGVSRCFRAE 363 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREE-----------------------DSFTEHER 301 AG+ G DTRG+ R H+F K EL + + T + Sbjct: 364 AGARGADTRGLYRVHEFTKVELFGWAMPDSAGEGTTRKATPASNGKGGGAAVTATTLFDD 423 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ----------------- 344 +L+ EIL L+L RV+ + DLG SA + D+EV + Sbjct: 424 ILALQTEILTALNLPCRVLEMPAHDLGASAARKQDIEVLFPSRMASSHSSSPTENATSNA 483 Query: 345 ---------NLYREISSCSTCGNFQSRRMNSRYRDP--NSKSLKFTHTLNGSGVAVGRCL 393 + + E++S S C ++Q+RR+ +R + + + KF HT+NG+ +AV R + Sbjct: 484 TSNNDIDVESGWGEVTSASICTDYQTRRLGTRLKSDAGDGGAGKFPHTVNGTAMAVPRII 543 Query: 394 IAILENYLNA-DGSVTIPTVLRPYMNNLAVIKKE 426 A+LE+ + G V +P VLR +M + VI + Sbjct: 544 AALLEHGWDEKKGVVVLPEVLRTWMGGIGVIGGK 577 >gi|195570682|ref|XP_002103333.1| GD19014 [Drosophila simulans] gi|194199260|gb|EDX12836.1| GD19014 [Drosophila simulans] Length = 417 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 104/353 (29%), Positives = 182/353 (51%), Gaps = 5/353 (1%) Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 KN ++ + L+ + L+ + +PN + + + P Sbjct: 54 KNNVPLIRSLIQELDAGDQHKLRQLQAELEQLPNATHPRLREYGEEPRELAQYVHRQLPP 113 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 +E E+ AL L D +G + LTG LA LE+A+ Q+ + T +HG+ Sbjct: 114 QS-SLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVT-DHGFK 171 Query: 194 EVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 +S P ++ E + G + ++ G L TSE++L ++++++ LPL Sbjct: 172 LISVPDILPKEVIESCGMRTEGERTQVYKLDTGECLSGTSEMALAGFFANKLLSEDQLPL 231 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 + T ++ +R+E S ++ +G+ R HQF K E+ +I EE S E E + ++ +R Sbjct: 232 KVTAVSRCYRAE-TSGLQEEKGIYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRR 290 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 L L++R++ + +LG A + YD+E W+ G+ ++ EISSCS C ++Q+RR+ RYR Sbjct: 291 LGLNFRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSA 350 Query: 373 SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 + HT+NG+ A+ R LIA+LE+Y DG + IP VLRP+M+N +I + Sbjct: 351 DGQILHAHTINGTATAIPRLLIALLESYQREDG-IEIPAVLRPFMDNQELITR 402 >gi|328769987|gb|EGF80030.1| hypothetical protein BATDEDRAFT_12060 [Batrachochytrium dendrobatidis JAM81] Length = 425 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 111/388 (28%), Positives = 184/388 (47%), Gaps = 40/388 (10%) Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 + L +K+Q+ E+ ++ + L +PN VP+G + ++ Sbjct: 19 ATKTRLIQAGKNIKQQVQATEETLSKLHNDLFNEAKHLPNDVHPSVPVGDESKAVLVDTI 78 Query: 128 VGKKPSAIH-------LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + + + H + E ++D DRA K+SG+RF L A LE AL + Sbjct: 79 GSPRTLESNLLMGSQSPLKTHLTLAELHDMVDIDRAGKVSGSRFYYLRNAGAMLEMALVR 138 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD-------------DMFCTTDG-- 225 + +D+ + G+T V P L+R E + G P+ D D+ T + Sbjct: 139 YAMDI-CIQRGFTPVLVPDLIRHEVLEACGFSPRSDDPQTYYVSTCVPGKDITNTDNPMT 197 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 L T+E L Y+ E+++ LP+ + + +FR+E G +G RG+ R HQF K E Sbjct: 198 LCLSATAEFPLAGKYAGEVLD--HLPINMSGMGRAFRAE-GLSGSTNRGLYRVHQFTKVE 254 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 L ++ R +S + +EI + L++ +R++++ T +LG A YD+E W+ G+N Sbjct: 255 LFTLARPTESMNVFHHFIQIQKEIFQGLEICFRILNMPTEELGAPAYIKYDMEAWMPGRN 314 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKS--------------LKFTHTLNGSGVAVGR 391 + EISS S C ++QSRR+N R + S +F HT+NG+ AV R Sbjct: 315 AWGEISSTSNCTDYQSRRLNIRCFPQSGASNESSNAPDVDTHTATEFVHTINGTACAVPR 374 Query: 392 CLIAILENYLNADGSVTIPTVLRPYMNN 419 +IA+LE + DGS+ IP LR Y Sbjct: 375 LMIALLETHQLPDGSIRIPEKLRKYFLG 402 >gi|242013943|ref|XP_002427658.1| seryl-tRNA synthetase, putative [Pediculus humanus corporis] gi|212512088|gb|EEB14920.1| seryl-tRNA synthetase, putative [Pediculus humanus corporis] Length = 439 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 107/427 (25%), Positives = 184/427 (43%), Gaps = 59/427 (13%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 N E ++ +K R +L LD + R G Sbjct: 51 NNREEIENNIKNRKNVGDINRVLELDNQFRD---------------------EKCPGKRE 89 Query: 69 LV-DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 + +L E +L PN V + Sbjct: 90 TLWQSLVKEAGSL-------------------------PNKTHPAVKEYGERPRVLKSSE 124 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 + + ++ E+ + L L+ + T ++G R TG LA LE+AL ++ I Sbjct: 125 HV---THSFIPKDFQELAKDLKLLRMEDLTTVAGQRSYFFTGDLADLEQALIKYTISRLL 181 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW-----LIPTSEVSLTNLYSH 242 ++ + +S P ++ E + G P D L TSE++L + S+ Sbjct: 182 KKN-FQLISVPDILPMEVLERCGMTPNALQTQVYQLDESHGQNIALSGTSEMALAAMNSN 240 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + K LP+ ++ FRSE S + +G+ R HQF K E+ I+ ++S + Sbjct: 241 VVFNLKDLPVNLAAVSRCFRSEV-SHFAEEKGLYRVHQFTKVEMFGISHPDNSEEMMQNF 299 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSR 362 + EEI L L Y+++ + +LG SA + +D+E W G+ +Y EISSCS C ++QSR Sbjct: 300 VDIQEEIFSSLGLDYQILDMPMHELGASAYRKHDIEAWFPGKEIYGEISSCSNCIDYQSR 359 Query: 363 RMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAV 422 R+N +YRD + L HT+NG+ A+ R L+A+ E + +G++ +P LRP++N V Sbjct: 360 RLNIKYRDED--KLFHVHTVNGTACAIPRMLMALFETHQQQNGNILLPKPLRPFLNGKEV 417 Query: 423 IKKEHIL 429 I+ ++ + Sbjct: 418 IQVQNSI 424 >gi|239607283|gb|EEQ84270.1| seryl-tRNA synthetase [Ajellomyces dermatitidis ER-3] Length = 580 Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 120/514 (23%), Positives = 206/514 (40%), Gaps = 91/514 (17%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IR+N R+ ++ I L ++ L + + + + + I Sbjct: 65 DIKHIRENAALYSQNCIDRNYHDLAQYPYEIQRLSAESHELQVALREPQRKIKQIESAIA 124 Query: 60 QAIAEGNL-----------------SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + + + L+ LK+Q L +++L Sbjct: 125 KLRKDSSDSCNADPVEKQKQKTKVEEELSTLRLSAQHLKDQSHHLTTTRAAHAKEIERLG 184 Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSA-IHLSREHFEIGEALGLMDFDRATKLSG 161 +PN+ E P G I P+ + H IG AL L++F A+ SG Sbjct: 185 LSLPNLTSPETPPGAEPRVVNYINYDPNSPANLPTHTTSHVTIGTALNLLNFASASHASG 244 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 + LT A LE+AL Q+ + + G+ VS P LV + G P+ A + Sbjct: 245 WGWYYLTNEAALLEQALIQYALRVAL-RRGWQAVSPPSLVYSHIAHACGFQPRDAHNEQQ 303 Query: 222 TTDG-------------RWLIPTSEVSLTNLYSHEII----ESKSLPLRFTTLAPSFRSE 264 R L T+E+ L +++ + I + LP++ ++ FR+E Sbjct: 304 IYHIEQSERDVARGRPGRCLAGTAEIPLAAMFAGQEIGGKGKESQLPMKMVGVSRCFRAE 363 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREE-----------------------DSFTEHER 301 AG+ G DTRG+ R H+F K EL + + T + Sbjct: 364 AGARGADTRGLYRVHEFTKVELFGWAMPDSAGEGTTRKATPASNGKGGGAAVTATTLFDD 423 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ----------------- 344 +L+ EIL L+L RV+ + DLG SA + D+EV + Sbjct: 424 ILALQTEILTALNLPCRVLEMPAHDLGASAARKQDIEVLFPSRMASSHSSSPTENATSNA 483 Query: 345 ---------NLYREISSCSTCGNFQSRRMNSRYRDP--NSKSLKFTHTLNGSGVAVGRCL 393 + + E++S S C ++Q+RR+ +R + + + KF HT+NG+ +AV R + Sbjct: 484 TSNNDIDVESGWGEVTSASICTDYQTRRLGTRLKSDAGDGGAGKFPHTVNGTAMAVPRII 543 Query: 394 IAILENYLNA-DGSVTIPTVLRPYMNNLAVIKKE 426 A+LE+ + G V +P VLR +M + VI + Sbjct: 544 AALLEHGWDEKKGVVVLPEVLRTWMGGIGVIGGK 577 >gi|156083631|ref|XP_001609299.1| hypothetical protein [Babesia bovis T2Bo] gi|154796550|gb|EDO05731.1| hypothetical protein BBOV_IV001340 [Babesia bovis] Length = 536 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 131/427 (30%), Positives = 210/427 (49%), Gaps = 27/427 (6%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED---IRARRNSNSAQIGQAIAEGNL 67 PE RH + +L+L ++ ++K+E+ + N S + G Sbjct: 118 PELFHENFSIRHEN-HLDTLLNL---RKLYLQKVEEESQLSQLSNRRSDLAKDYLTSGTS 173 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 ++K + TL+ ++ LE ++ ++ L++ +PN+ E+VP + + + + Sbjct: 174 QP--SIKESSITLRNEIKSLEASIRKLKDDIRSLVNRLPNIVSEDVPKTDTVVQKVYSGT 231 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + + + ++TK++G FS +G ++ LERAL FM+D H Sbjct: 232 TKAKGQQTTIPHDE--VIARFSEFFTSKSTKIAGTGFSAFSGDISRLERALINFMLDTHH 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-------WLIPTSEVSLTNLY 240 GY EVS P +V + TG + +F +D+F D +LIPT E+ L +L Sbjct: 290 KLFGYKEVSVPFVVNSSTLEATGHLQRFENDLFKLDDRHQCSGDPGYLIPTGEIPLISLL 349 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S+ ++ LPL P FR+E GR+TRG++R HQF K EL+ + S HE Sbjct: 350 SNTRLQQNKLPLWLMAYTPCFRAEIQDYGRETRGLIRNHQFGKVELICVCDATASTDFHE 409 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 M+S E IL+ LDL YR V L +LG ++ KT DLEV+ Y E+SSCS ++Q Sbjct: 410 LMISHIEFILESLDLPYRRVLLPANELGSTSNKTIDLEVYFPSLRKYIEVSSCSNTLDYQ 469 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL--NADGS--VTIPTVLRPY 416 S ++ R + H +NGSG+A+GR L AILENY G + IP +L+PY Sbjct: 470 SNKLGILTRSGSK-----VHCINGSGLAIGRTLSAILENYQVIKDSGRLEIAIPHILQPY 524 Query: 417 MNNLAVI 423 + + Sbjct: 525 LEGDQSL 531 >gi|17737985|ref|NP_524365.1| Seryl-tRNA synthetase [Drosophila melanogaster] gi|7300003|gb|AAF55175.1| Seryl-tRNA synthetase [Drosophila melanogaster] gi|21430868|gb|AAM51112.1| SD21818p [Drosophila melanogaster] Length = 417 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 106/353 (30%), Positives = 185/353 (52%), Gaps = 5/353 (1%) Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 KN ++ + L+ + L+ + +PN + L + V ++ + Sbjct: 54 KNNVPLIRSLIQELDAGDQHKLRQLQAELEQLPNATHPRLRDYGEEPR-ELAQYVHRQLT 112 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 +E E+ AL L D +G + LTG LA LE+A+ Q+ + T EHG+ Sbjct: 113 PQSRLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVT-EHGFK 171 Query: 194 EVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 +S P ++ E + G + ++ G L TSE++L ++++++ LPL Sbjct: 172 LISVPDILPKEVIESCGMRTEGERTQVYKLDTGECLSGTSEMALAGFFANKLLSEDQLPL 231 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 + T ++ +R+E S ++ +G+ R HQF K E+ +I EE S E E + ++ +R Sbjct: 232 KVTAVSRCYRAE-TSGLQEEKGIYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRR 290 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 L L++R++ + +LG A + YD+E W+ G+ ++ EISSCS C ++Q+RR+ RYR Sbjct: 291 LGLNFRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSA 350 Query: 373 SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 + HT+NG+ A+ R LIA+LE+Y DG + IP VLRP+M+N +I + Sbjct: 351 DGQILHAHTINGTATAIPRLLIALLESYQKEDG-IEIPAVLRPFMDNQELITR 402 >gi|218198229|gb|EEC80656.1| hypothetical protein OsI_23052 [Oryza sativa Indica Group] Length = 202 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 112/200 (56%), Gaps = 14/200 (7%) Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 I+ LP ++ + FR+EAG+AG TRG+ R HQF K E+ R E+S HE Sbjct: 1 MDSILPDSDLPRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEESDKCHE 60 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +++ EE+ L LH++ + + TGDLG A + +D+E W+ G + Y EISS S C ++Q Sbjct: 61 ELITIEEELYASLGLHFKTLDMATGDLGAPAYRKFDIEAWMPGLDRYGEISSASNCTDYQ 120 Query: 361 SRRMNSRYRD----------PNSK----SLKFTHTLNGSGVAVGRCLIAILENYLNADGS 406 SRR+ R+R K +F HTLN + VAV R +I ILEN+ DG+ Sbjct: 121 SRRLGIRFRPSPADPPPANAKKGKGSSGPTQFVHTLNATAVAVPRLIICILENFQQEDGT 180 Query: 407 VTIPTVLRPYMNNLAVIKKE 426 V IP LRP+M L V+ + Sbjct: 181 VVIPEPLRPFMGGLEVLSPK 200 >gi|158287129|ref|XP_001688169.1| AGAP000991-PA [Anopheles gambiae str. PEST] gi|157019760|gb|EDO64479.1| AGAP000991-PA [Anopheles gambiae str. PEST] Length = 349 Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 89/337 (26%), Positives = 160/337 (47%), Gaps = 11/337 (3%) Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 ++ +PN +G I+ R + +I + + L + Sbjct: 3 DAELAKLPNRTHP-AVVGYRTEPRIIERYNEHAKRTDRKYFQFGDICKRMNLYRMENLGN 61 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 +G R LT LA LE AL + +D + + V+ P ++ + G + Sbjct: 62 FTGHRSYYLTDELAELEHALICYAVDS-LRQRNFQLVTVPDVLPGRIIESCGMSVHGERN 120 Query: 219 MFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 L TSE++L + ++ + LP + ++ +R+E SA ++ Sbjct: 121 QVYKLHGRDGREPLCLSGTSEMALAGYLAGRVLPADRLPQKLMAVSRCYRAE-TSALQEE 179 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 +G+ R HQF K E+ ++ + S T E + ++ +L LH+ ++ + +LG A Sbjct: 180 KGIYRVHQFTKVEMFAVCQPGQSATVLEEFRAIEVQLFDQLGLHFLLLDMPPCELGAPAY 239 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 + YD+E W+ G+ +Y EISSCS C ++Q+RR+ R R + F HT+NG+ A+ R Sbjct: 240 RKYDIEAWMPGRAMYGEISSCSDCTDYQARRLGIRVRT--GQEETFAHTVNGTACAIPRM 297 Query: 393 LIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHIL 429 LIA+LEN+ N D ++T+P VLR YM ++++ +L Sbjct: 298 LIALLENFQNEDYTITVPEVLRRYMGGKQLLRRRKVL 334 >gi|325973705|ref|YP_004250769.1| seryl-tRNA synthetase [Mycoplasma suis str. Illinois] gi|325990148|ref|YP_004249847.1| Seryl-tRNA synthetase [Mycoplasma suis KI3806] gi|323575233|emb|CBZ40898.1| Seryl-tRNA synthetase [Mycoplasma suis] gi|323652307|gb|ADX98389.1| seryl-tRNA synthetase [Mycoplasma suis str. Illinois] Length = 416 Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats. Identities = 122/433 (28%), Positives = 202/433 (46%), Gaps = 25/433 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+ ++W R+N + L RHLE E I LD + L K+++ +RA +N S Sbjct: 1 MISLKWFRENFDELVSRYSGRHLEEGVLERIRELDIQTVQLNKELDSLRAEKNKLSENYD 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + + + L ++ K + L +P Sbjct: 61 PSKSSSISEIKFKIVELEKDLLQK----------------KGELHLLLSGLPAIPNEEIE 104 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 E+ L+++ G+ P L + + K++G +SV L RAL Sbjct: 105 QEDKLVKTWGEIPEGDFYKSYLELSSSLGLLD-LELSAKITGTGYSVYVDRGEKLMRALI 163 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSLT 237 F +D +HG+ P +V ++++ T QI KF +++F ++L PT+EV LT Sbjct: 164 SFTLDW-AEKHGFKRYFLPSVVNKDSLFCTSQINKFEENLFQLNGDSKKFLSPTAEVQLT 222 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 NL+ I+ LP++ FR+E AG ++RG++R QF K E+V I+ E S Sbjct: 223 NLFKDMILTESDLPIKVCANTNCFRNEKIGAGVESRGIMRMFQFNKTEIVMISHPEKSEE 282 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + M E +L+ L+L YR + L ++ F++ KTYD EVW+ + YREISS S Sbjct: 283 AQDFMSKVIESLLEELNLPYRKIMLSRSEMSFASSKTYDFEVWIPSEKKYREISSLSNTR 342 Query: 358 NFQSRRMNSRYRDPN---SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 +FQS R R + + ++ H LNGS +A+ R IA++EN+ A+G + +P L Sbjct: 343 DFQSMRGKIRCKTNRLDPKEKSRYVHVLNGSCLAIDRLFIAVVENHQTAEGEIILPESLS 402 Query: 415 PYMNNLAVIKKEH 427 ++ I KE Sbjct: 403 KFL-GFKKISKEG 414 >gi|194900998|ref|XP_001980042.1| GG16916 [Drosophila erecta] gi|190651745|gb|EDV49000.1| GG16916 [Drosophila erecta] Length = 416 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 105/353 (29%), Positives = 184/353 (52%), Gaps = 5/353 (1%) Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 KN ++ + LE + S L+ + +PN + + + P Sbjct: 53 KNNMPLIRSLIQELEAGDQRKLSQLQAELEQLPNATHPRLQDYGEEPRELAQYVHRELPP 112 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 +E E+ AL L D +G + LTG LA LE+A+ Q+ + T +HG+ Sbjct: 113 QS-TLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVT-DHGFK 170 Query: 194 EVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 +S P ++ E + G + ++ G L TSE++L ++++++ + LPL Sbjct: 171 LISVPDILPKEVIESCGMRTEGERTQVYKLDTGECLSGTSEMALAGFFANKLLSEEQLPL 230 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 + T ++ +R+E S ++ +G+ R HQF K E+ +I EE S E E + ++ +R Sbjct: 231 KVTAVSRCYRAE-TSGLQEEKGIYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRR 289 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 L L++R++ + +LG A + YD+E W+ G+ ++ EISSCS C ++Q+RR+ RYR Sbjct: 290 LGLNFRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSV 349 Query: 373 SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 + HT+NG+ A+ R LIA+LE+Y DG + IP VLRP+M++ +I + Sbjct: 350 DGQILHAHTINGTATAIPRLLIALLESYQREDG-IEIPAVLRPFMDHQELITR 401 >gi|195145494|ref|XP_002013727.1| GL23244 [Drosophila persimilis] gi|194102670|gb|EDW24713.1| GL23244 [Drosophila persimilis] Length = 418 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 109/398 (27%), Positives = 192/398 (48%), Gaps = 41/398 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNS---NSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 LDE + + ++R RN+ I +A G+ S+ L+ E L Sbjct: 42 QLDELEKNV-----ELRHHRNNVPLIRKLI-EASVRGDRSVEQQLEEELGQL-------- 87 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 PN + + + P +E E+ AL Sbjct: 88 -----------------PNATHPRLLDYGDQPRELAQHVQREMPLK---PKEFSELARAL 127 Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 L D +G + LTGHLA LE+A+ Q+ + T +HG+ +S P ++ E + Sbjct: 128 NLYRMDHLGNYTGHKSYYLTGHLATLEQAIIQYALQSVT-KHGFRLISVPDILPKEVIES 186 Query: 209 TGQIPKFA-DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 G + ++ G L TSE++L ++++++ + LPL+ T ++ +R+E S Sbjct: 187 CGMRTEGERTQVYKLDTGECLSGTSEMALAGFFANKVLPEEELPLKVTAVSRCYRAE-TS 245 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 ++ +G+ R HQF K E+ +I S E E + ++ K+L +++R++ + +L Sbjct: 246 GLQEEKGIYRVHQFTKVEMFAICTPTQSEAELEEFKNIEVDLFKQLGINFRLLDMPPCEL 305 Query: 328 GFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGV 387 G A + YD+E W+ G+ ++ EISSCS C ++Q++R+ +Y + ++ HT+NG+ Sbjct: 306 GSPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQAKRLAVKYLRASDGQVQHAHTINGTAT 365 Query: 388 AVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 A+ R LIA+LE+Y D SV IPTVLRP+M+ I + Sbjct: 366 AIPRLLIALLESYQKGD-SVEIPTVLRPFMDGQEFIAR 402 >gi|73959373|ref|XP_547245.2| PREDICTED: similar to seryl-tRNA synthetase isoform 1 [Canis familiaris] Length = 339 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 20/296 (6%) Query: 147 ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAM 206 + + ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Sbjct: 1 MVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVM 59 Query: 207 YGTGQIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 Q+ +F ++++ D ++LI TSE + L+ E + + LP+++ Sbjct: 60 QEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKY 119 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKR 312 L+ FR E GS GRDTRG+ R HQF K E + S+ E M++ AE+ + Sbjct: 120 AGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQS 179 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 L + Y +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 180 LGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTK 239 Query: 373 SK--SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 ++F H LN + A R + AILENY G + +P L+ +M +I Sbjct: 240 KMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-IVVPEKLKEFMPPGLQELIP 294 >gi|68161049|gb|AAY86956.1| seryl-tRNA synthetase [Ictalurus punctatus] Length = 347 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 93/293 (31%), Positives = 150/293 (51%), Gaps = 18/293 (6%) Query: 141 HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 H ++ + + ++ ++G+R L G L LE+AL + + + YT + P Sbjct: 2 HVDLVVMVDGYEGEKGAIIAGSRGYFLKGPLVFLEQALINYALRV-LYSKNYTILYTPFF 60 Query: 201 VRDEAMYGTGQIPKFADDMFCTT------------DGRWLIPTSEVSLTNLYSHEIIESK 248 +R E M Q+ +F ++++ D ++LI TSE + E ++ + Sbjct: 61 MRKEVMQEVAQLSQFDEELYKVIGKGSGHSDDTSVDEKYLIATSEQPIAAFLRDEWLKPE 120 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCA 306 LP+R+ ++ FR E GS GRDTRG+ R HQF K E + S+ + M++ A Sbjct: 121 DLPIRYAGISTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHNHKSWEMFDEMIATA 180 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 E+ + L L YR+V++ +G L ++A K DLE W G +RE+ SCS C ++Q+RR+ Sbjct: 181 EDFYQSLGLPYRIVNIVSGSLNYAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRI 240 Query: 367 RYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 RY +F H LN + A R + AILENY A+G + IP LR +M Sbjct: 241 RYGQTKKMMDKAEFVHMLNATMCATTRVICAILENYQTAEG-IIIPEPLRVFM 292 >gi|194764853|ref|XP_001964542.1| GF22996 [Drosophila ananassae] gi|190614814|gb|EDV30338.1| GF22996 [Drosophila ananassae] Length = 419 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 99/323 (30%), Positives = 170/323 (52%), Gaps = 5/323 (1%) Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 +PN V + + P+ +E EI AL L D +G + Sbjct: 86 QLPNETHPRVLDYGEEPRELAQYKHRELPA-DTTIKEFSEIARALNLYRMDHLGNYTGHK 144 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFCT 222 L G LA LE+A+ Q+ + T HG+ +S P ++ E + G + ++ Sbjct: 145 SYYLMGQLATLEQAIIQYALQAVT-SHGFKLISVPDILPREVIESCGMRTEGERTQVYKL 203 Query: 223 TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 G L TSE++L ++++++ + LPL+ T ++ +R+E S ++ +G+ R HQF Sbjct: 204 DTGECLSGTSEMALAGFFANKLLTEEQLPLKVTAVSRCYRAE-TSGLQEEKGIYRVHQFN 262 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 K E+ +I E S E E ++ +RL L++R++ + +LG A + YD+E W+ Sbjct: 263 KVEMFAICTAEQSEAELEEFKDTEVDLFRRLGLNFRLLDMPPCELGAPAYQKYDIEAWMP 322 Query: 343 GQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 G+ ++ EISSCS C ++Q++R+ RYR + + HT+NG+ A+ R LIA+LE+Y Sbjct: 323 GRKMWGEISSCSNCTDYQAKRLGIRYRRSSDGQVVDAHTINGTATAIPRLLIALLESYQR 382 Query: 403 ADGSVTIPTVLRPYMNNLAVIKK 425 D +V IPTVLRP+M+ +I + Sbjct: 383 GD-AVEIPTVLRPFMDGQELITR 404 >gi|195399796|ref|XP_002058505.1| GJ14464 [Drosophila virilis] gi|194142065|gb|EDW58473.1| GJ14464 [Drosophila virilis] Length = 427 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 98/351 (27%), Positives = 173/351 (49%), Gaps = 6/351 (1%) Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 L E L + + + L + +PN + + + P Sbjct: 66 RIRQLVEALRQGGQTQDVIRQQLAAELQQLPNATHPRLLAYDNQPLELANYKHRVLPQQG 125 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 ++E E+ AL L + +G + LTG LA LE+A+ Q+ + T HG+ + Sbjct: 126 --AKEFSELARALSLYRMEHLGNYTGHKSYYLTGQLAMLEQAIIQYALRSLT-RHGFKLI 182 Query: 196 SAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 S P ++ E + G + ++ + L TSE++L +++ + LP++ Sbjct: 183 SVPDILPREIIESCGMRTEGERTQVYKLDTDQCLSGTSEMALAGFFANRQLMEWELPVKV 242 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 ++ +R+E S + +G+ R HQF K E+ +I E S E + ++ K+L Sbjct: 243 AAVSRCYRAE-TSGLHEEKGIYRVHQFTKVEMFAIATPEQSEPMLEEFKNIEIDLFKQLG 301 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK 374 +++R++ + +LG A + YD+E WL G+ ++ EISSCS C ++Q++R+N +Y Sbjct: 302 INFRLLDMPPCELGAPAYQKYDIEAWLPGRQMWGEISSCSNCTDYQAKRLNVKYNRARDA 361 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +L HTLNG+ A+ R LIA++E+Y +AD S+ IP VL P+MN I K Sbjct: 362 ALIHAHTLNGTATAIPRLLIALVESYQSAD-SIQIPEVLVPFMNGQRTITK 411 >gi|307184507|gb|EFN70896.1| Seryl-tRNA synthetase, mitochondrial [Camponotus floridanus] Length = 433 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 105/372 (28%), Positives = 175/372 (47%), Gaps = 11/372 (2%) Query: 64 EGNLSLVDALKNETSTLKEQLPILE-KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + ++ + +K + + ILE ++ E + +S +PN V + + Sbjct: 53 KNRDAIFNNIKRR-KNIGDIDKILELSDKPEKQKLFLEELSKLPNFTHPAVIDYGNVPKL 111 Query: 123 ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFM 182 + +E E+ L M ++G R + G LA LE AL Q+ Sbjct: 112 LKQCGEKV--KFDFEPKEFAELVTDLKAMRIQNLGPIAGQRSYIFLGDLAELEEALIQYT 169 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTN 238 I +HG+ +S P +++ E + G I ++ C D L T+E+SL Sbjct: 170 I-RELMKHGFKLISVPDIIQTEVIERCGLITDDRTLVYNLDPCCGDDYSLSGTAEMSLAR 228 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + LPL+ ++ +R+EA SA D RG+ R HQF K E+ + S Sbjct: 229 KLINTTFPYDKLPLKLAAVSRCYRAEASSAL-DERGIYRVHQFTKVEMFVCSEPCQSEKV 287 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + + + E+ L LH++V+ + DLG SA + YD+E W+ G+ Y E+SSCS C + Sbjct: 288 FQDLQNIQGELFSSLGLHFQVMDMPPSDLGSSAYRKYDIEGWMPGRKQYGELSSCSNCTD 347 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 +QSRR+N +Y+ ++ + HTLNG+ A+ R LIA+ E Y +T+P L P M Sbjct: 348 YQSRRLNIKYKTKEGNTV-YMHTLNGTACAIPRMLIALCETYQTKHHRITVPEKLVPLMK 406 Query: 419 NLAVIKKEHILE 430 +IKK+ I + Sbjct: 407 GKTLIKKQPIAD 418 >gi|296233750|ref|XP_002807884.1| PREDICTED: LOW QUALITY PROTEIN: seryl-tRNA synthetase, mitochondrial-like [Callithrix jacchus] Length = 487 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 117/443 (26%), Positives = 189/443 (42%), Gaps = 51/443 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ + PE AL+ R I+S ++ R L ++I + + + + + Sbjct: 58 LDIELLCACPEEAARALELRKGVLRSADLPAIISTWQELRRLREQIRSLEEEKAAVTKAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +A + V L+ ++++L L E ++ +PN + Sbjct: 118 QAQLANRDCGEVQQDPQYQSLRARGREIRKELVPLYPREAQLEEEFYLQALRLPNQTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L VG KP+ R H EIGE L ++ R + +SG R L G A Sbjct: 178 VPVGDESQARVLHV-VGDKPAFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F ++ G+T ++ P L+R G G P + Sbjct: 237 LLQHGLVNFTLNKLL-RRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L F + SFR E+ Sbjct: 296 LAGTAEVG--------------LAGYFMDHSVSFRDLP------------------VEIY 323 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 324 GVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 383 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +FQSRR++ ++ + L+F HT+N + AV R LIA+LE+ DG Sbjct: 384 HFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATACAVPRLLIALLESNQQKDG 442 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P L+PY+ + H+ Sbjct: 443 SVLVPPALQPYLGTDRITAPTHV 465 >gi|291226631|ref|XP_002733295.1| PREDICTED: seryl-tRNA synthetase 2-like [Saccoglossus kowalevskii] Length = 320 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 95/277 (34%), Positives = 143/277 (51%), Gaps = 9/277 (3%) Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 L+G R L G A LE AL ++ + E G+ +S P VR G Sbjct: 36 NLGHLTGHRSYYLLGAGAELEEALVKYSLAKILRE-GFKCISVPDAVRPVVFEACGMNTS 94 Query: 215 FADDMFCT-----TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 L TSE+S+ Y + I+E LP + ++ +R+E Sbjct: 95 GLHTQVYHLHPDRHSELCLTGTSEISMAGYYMNRILEHCDLPQKLAAVSRCYRAETA-HT 153 Query: 270 RDTRGMLRQHQFWKCELVSITREE-DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 + RG+ R HQF K E+ ++TR +S H++ L+ +++ L LH+RV+ + + +LG Sbjct: 154 AEARGLYRVHQFTKVEMFAVTRNNIESDQIHQQFLTIQKQLFSGLGLHFRVLDMPSEELG 213 Query: 329 FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVA 388 A + +D+E W+ G++ Y EISS S C ++QSRR+N +YRD ++ F T+NG+ A Sbjct: 214 APAYRKFDIEAWMPGRDTYGEISSTSNCTDYQSRRLNIKYRDKSNSE-HFVGTVNGTACA 272 Query: 389 VGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 V R +IAILE Y DGSV IP L+ YM AVI K Sbjct: 273 VPRMIIAILETYQQEDGSVEIPLALQSYMRGQAVITK 309 >gi|224096564|ref|XP_002310660.1| predicted protein [Populus trichocarpa] gi|222853563|gb|EEE91110.1| predicted protein [Populus trichocarpa] Length = 302 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 85/244 (34%), Positives = 125/244 (51%), Gaps = 14/244 (5%) Query: 197 APLLVRDEAMYGTGQIPKFAD--DMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 +R E M Q+ +F + + D ++LI T+E L + + I LP+R+ Sbjct: 39 HLFFMRKEVMAKCAQLSQFDELYKVTGEGDDKYLIATAEQPLCAYHQDDWIHPSQLPIRY 98 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE--DSFTEHERMLSCAEEILKR 312 + FR EAG+ GRDT G+ R HQF K E IT DS+ HE M+ +EE + Sbjct: 99 AGCSSCFRKEAGAHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFCQE 158 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 L++ Y+VV++ +G L +A K YDLE W N YRE+ SCS C ++QSRR+ RY Sbjct: 159 LNIPYQVVAIVSGALNDAAAKKYDLEGWFPASNTYRELVSCSNCTDYQSRRLEIRYGQKK 218 Query: 373 SK---------SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 + ++ H LN + A R + ILENY DG V IP LR +M+ + Sbjct: 219 AMPFLFIEEQVKKQYCHLLNSTLTATERTICCILENYQKEDG-VGIPEPLRKHMSGKEFL 277 Query: 424 KKEH 427 ++ Sbjct: 278 PFQN 281 >gi|195053792|ref|XP_001993810.1| GH19144 [Drosophila grimshawi] gi|193895680|gb|EDV94546.1| GH19144 [Drosophila grimshawi] Length = 436 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 91/343 (26%), Positives = 174/343 (50%), Gaps = 9/343 (2%) Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 +++ + L++ + +PN + + + P +++E ++ AL Sbjct: 81 QDQEQTRRQLEEQLELLPNATHPRLLGYDNQPLELANYKHRVLPEQG-VAKEFSDLARAL 139 Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 L D +G + LTG LA +E+A+ Q+ + T + G+ +S P ++ + Sbjct: 140 NLYRMDHLGNYTGHKSYYLTGQLAMMEQAIIQYALQSITRQ-GFKLISVPDILPRNIIEA 198 Query: 209 TGQIPKFA-DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 G + ++ G L TSE++L ++ + + LP++ ++ +R+E S Sbjct: 199 CGMRTEGERTQVYKLDTGECLSGTSEMALAGFFAQRQLAEQELPVKVAAVSRCYRAE-TS 257 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 + +G+ R HQF K E+ +I E S E+ + + K+L +++R++ + +L Sbjct: 258 GLHEEKGIYRVHQFTKVEMFAIATPEQSEQILEQFKNTEIALFKQLGINFRLLDMPPCEL 317 Query: 328 GFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGV 387 G A + YD+E W+ G+ ++ EISSCS C ++Q++R+ +YR + SL + HT+NG+ Sbjct: 318 GAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQAKRLQIKYRRDSDGSLAYAHTINGTAT 377 Query: 388 AVGRCLIAILENYL-----NADGSVTIPTVLRPYMNNLAVIKK 425 A+ R LIA++E+Y N + S+ IP VL P+MN I K Sbjct: 378 AIPRLLIALIESYQGAGNGNGNDSIQIPEVLVPFMNGQRTITK 420 >gi|169606814|ref|XP_001796827.1| hypothetical protein SNOG_06457 [Phaeosphaeria nodorum SN15] gi|160707087|gb|EAT86288.2| hypothetical protein SNOG_06457 [Phaeosphaeria nodorum SN15] Length = 395 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 117/384 (30%), Positives = 189/384 (49%), Gaps = 33/384 (8%) Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + E LK QL +E +E + ++ +PN+ P+GT I Sbjct: 15 ILAEAKELKVQLSAIEAQEATLQEEIESRAQDLPNLSSTHTPVGTEPEVVGYINEARAPA 74 Query: 133 SA--IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 + + R H EIG+ LG++DF + + SG + L G A LE+AL Q+ + Sbjct: 75 AFPSDTVWRSHVEIGQELGILDFSGSAQTSGWGWYFLVGDGALLEQALVQYAL-GVAKRR 133 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----------DGRWLIPTSEVSLTNL 239 G+ V+ P LV G P+ + L T+E+ L + Sbjct: 134 GWKAVAPPSLVYSHIASACGFQPRDQNGEQQIYAIEQSEKDKSKPQLALAGTAEIPLAGM 193 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE------- 292 +++ IE LPL+ ++ +R+EAG+ G DT+G+ R H+F K E+ + T+ Sbjct: 194 KANQTIEESQLPLKTVGVSRCYRAEAGARGADTKGLYRVHEFTKVEMFAWTKPQPDEEHF 253 Query: 293 -----EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ--- 344 +DS E ML +EIL+ L LH R++ + T DLG SA + D+E + + Sbjct: 254 SSSATDDSEVLFEEMLGIQQEILEGLGLHCRILEMPTTDLGASATRKRDIEAFFPSRREK 313 Query: 345 -NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 + E++S S C ++Q+RR+++R R L+F +TLNG+ +AV R L AILEN+ N Sbjct: 314 DEGWGEVTSTSMCTDYQTRRLHTRTRIA--GKLEFPYTLNGTALAVPRVLAAILENHWNE 371 Query: 404 -DGSVTIPTVLRPYMNNLAVIKKE 426 + +VTIP VLR +M+ I+K+ Sbjct: 372 KERAVTIPPVLRVFMDGQTTIEKQ 395 >gi|119577250|gb|EAW56846.1| seryl-tRNA synthetase 2, isoform CRA_c [Homo sapiens] gi|119577251|gb|EAW56847.1| seryl-tRNA synthetase 2, isoform CRA_c [Homo sapiens] Length = 328 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 98/309 (31%), Positives = 150/309 (48%), Gaps = 10/309 (3%) Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 VG KP R H EIGE L ++ R + +SG R L G A L+ L F + Sbjct: 1 MVGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKL 60 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEVSLTNLYS 241 G+T ++ P L+R G G P L T+EV L + Sbjct: 61 L-RRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFM 119 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEH 299 + + LP+R + +R+E + G++ RG+ R H F K + +T E S Sbjct: 120 DHTVAFRDLPVRMVCSSTCYRAETNT-GQEPRGLYRVHHFTKAGMFGVTGPGLEQSSQLL 178 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ + E++S S C +F Sbjct: 179 EEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDF 238 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 QSRR++ ++ + L+F HT+N + AV R LIA+LE+ DGSV +P L+ Y+ Sbjct: 239 QSRRLHIMFQTEAGE-LQFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYLGT 297 Query: 420 LAVIKKEHI 428 + H+ Sbjct: 298 DRITAPTHV 306 >gi|321475819|gb|EFX86781.1| hypothetical protein DAPPUDRAFT_44560 [Daphnia pulex] Length = 434 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 179/374 (47%), Gaps = 18/374 (4%) Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I G++ L L L + ++ E+ +L IPN + Sbjct: 51 IKFRKGTGSIELFMEL------LSKFNSSQSADQMELKKTLLAEALKIPNNSHPRLHAYG 104 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 A + G+KP+ E I + L L+ + L+G R L LA LE+A Sbjct: 105 DAPHVVETP--GEKPNWSFKPLEFHSIAKDLDLLRTENLGNLTGPRSYYLIKELAQLEQA 162 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-----IPTS 232 L F +D + G+ S P L+ + G K + ++ T+ Sbjct: 163 LIHFTVD-ALEKKGFILYSVPDLLHSRLIESCGMDTKSERTQVYKLEPKFYGDICLSGTA 221 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E++L + ++ + LP++ ++ +R+E S ++ RG+ R HQF K E+ +T Sbjct: 222 EMALASYFTGSAVPVSELPIKMAAVSRCYRAE-TSNVQEERGIYRVHQFTKVEMFGVTSG 280 Query: 293 ED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E S E ++ +E+ L LHY+++ + +LG A + +D+E W+ G+N+Y EI Sbjct: 281 EAAASDALLEEFVAIQKELFSSLGLHYQLLDMPLHELGAPAYRKFDIEAWMPGRNMYGEI 340 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SS S C ++Q+RR+N + D + + +F HT+NG+ AV R LIA+LE + ++G V IP Sbjct: 341 SSASNCTDYQARRLNIQSIDSSD-TRRFVHTVNGTACAVPRTLIALLETHQQSNGEVIIP 399 Query: 411 TVLRPYMNNLAVIK 424 VL+PY+N + ++ Sbjct: 400 AVLQPYLNGMQRLR 413 >gi|330954586|gb|EGH54846.1| seryl-tRNA synthetase [Pseudomonas syringae Cit 7] Length = 321 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 131/323 (40%), Positives = 188/323 (58%), Gaps = 6/323 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A G + L + + +L + E + + L L+ IPN+P E VP+G Sbjct: 61 AKQRG--EDIAPLMADVERMGNELSEGKVELDGIQAELDALVLSIPNLPHESVPVGADEE 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ +R G ++H +GE G +DF+ A KLSGARF++L G +A L RAL Q Sbjct: 119 GNVEVRRWGTPTHFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSL 236 FMI+LH +EHGY E P LV+ A+ GTGQ+PKF +D+F + +LIPT+EVSL Sbjct: 179 FMINLHINEHGYEETYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADLYLIPTAEVSL 238 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TN+ S EI+++K LPL+F P FRSEAG++GRDTRGM+RQHQF K E+V I +DS Sbjct: 239 TNIVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVAPDDSM 298 Query: 297 TEHERMLSCAEEILKRLDLHYRV 319 E + AE +L+ L+L YR Sbjct: 299 AALESLTGNAERVLQLLELPYRT 321 >gi|2440051|emb|CAA75101.1| seryl-tRNA synthetase [Drosophila melanogaster] Length = 322 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 98/287 (34%), Positives = 163/287 (56%), Gaps = 4/287 (1%) Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 E E+ AL L D +G + LTG LA LE+A+ Q+ + T EHG+ +S P Sbjct: 24 EFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVT-EHGFKLISVPD 82 Query: 200 LVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 ++ E + G + ++ G L TSE++L ++++++ LPL+ T ++ Sbjct: 83 ILPKEVIESCGMRTEGERTQVYKLDTGECLSGTSEMALAGFFANKLLSEDQLPLKVTAVS 142 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 +R+E S ++ +G+ R HQF K E+ +I EE S E E + ++ +RL L++R Sbjct: 143 RCYRAE-TSGLQEEKGIYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRRLGLNFR 201 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 ++ + +LG A + YD+E W+ G+ ++ EISSCS C ++Q+RR+ RYR + Sbjct: 202 LLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSADGQILH 261 Query: 379 THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 HT+NG+ A+ R LIA+LE+Y DG + IP VLRP+M+N +I + Sbjct: 262 AHTINGTATAIPRLLIALLESYQKEDG-IEIPAVLRPFMDNQELITR 307 >gi|183231706|ref|XP_001913612.1| seryl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS] gi|169802371|gb|EDS89615.1| seryl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS] Length = 251 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 89/233 (38%), Positives = 130/233 (55%), Gaps = 10/233 (4%) Query: 201 VRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 +R E M T Q+ F + ++ D ++LI TSE LT L++ E I K LP+ Sbjct: 1 MRRELMAKTAQLSDFDETLYHVGTGKDVELDDQKYLIATSEQPLTALHAGEWILPKQLPI 60 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 R+ + +FR EAG+ G+DT G+ R HQF K E +T + S+ HE M+ + + + Sbjct: 61 RYMGFSTNFRKEAGAHGKDTWGIFRVHQFEKIEQFCMTLPDKSWEMHEEMIKNSRDFFES 120 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR-DP 371 L + YRVV++ +G L +A K YDLE + G N YRE+ SCS C ++QSR + R + D Sbjct: 121 LKIPYRVVNIVSGALNNAAAKKYDLEGYFPGFNEYRELVSCSNCTDYQSRELEVRLQTDK 180 Query: 372 NSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 K+ + H LN + A R L ILENY DG + +P VLRPY+ + I Sbjct: 181 KDKTKSYVHMLNSTLCATERALCCILENYQCEDG-IIVPEVLRPYVGGVEKIP 232 >gi|332022730|gb|EGI63006.1| Seryl-tRNA synthetase, mitochondrial [Acromyrmex echinatior] Length = 418 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 112/440 (25%), Positives = 183/440 (41%), Gaps = 72/440 (16%) Query: 3 DIQWIRQ--NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 DI ++ N + + +K R + +L Sbjct: 22 DIDFVCNPANRDIIFSNIKSRKGIGDIDKVLEY--------------------------- 54 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 GN + L E S + PN V Sbjct: 55 ---SGNAEKRELLLQELSKI-------------------------PNCTHPVVIEYGDEP 86 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + G+KP +E E+ L + ++G R +L G LA LE AL Q Sbjct: 87 RLLKKC--GRKPQFDFEPQEFAELATNLKAIRTHTLGPVTGQRSYILLGDLAELEEALVQ 144 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW-----LIPTSEVS 235 + + +HG+ +S P ++ E + G I + D + L T+E+S Sbjct: 145 YTL-RKLMKHGFKLLSVPDIILTEIIERCGLIVNNNRTLVYNLDSHYDDNYSLSGTAEMS 203 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ-----HQFWKCELVSIT 290 L + + II +LP++ ++ +R+E GS D RG+ RQ HQF K E+ + Sbjct: 204 LASKLINTIISYDTLPMKLAAVSRCYRAE-GSGSLDERGIYRQEITLVHQFTKVEMFVCS 262 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + S + + + E + L LH++++ + + DLG SA + D+E W+ G+ LY E+ Sbjct: 263 KPNQSEKVFQDLQNIQEGLFSSLGLHFQIMDMPSLDLGSSAYRKCDMEGWMPGRKLYGEL 322 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 SSCS C ++QSRR+N +YR + + HTLNG+ A+ R LIA+ E Y +T+P Sbjct: 323 SSCSNCTDYQSRRLNIKYRTKDGN-TAYVHTLNGTACAIPRMLIALCETYQTRHHRITVP 381 Query: 411 TVLRPYMNNLAVIKKEHILE 430 L P M +IKK+ I + Sbjct: 382 NELVPLMKGKTLIKKQPIAD 401 >gi|167470159|ref|ZP_02334863.1| seryl-tRNA synthetase [Yersinia pestis FV-1] Length = 297 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 124/299 (41%), Positives = 175/299 (58%), Gaps = 10/299 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + E + +E+ ++L + E ++A RNS S QIG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGFKLDVEVLRQQEERRKVLQVETESLQAERNSRSKQIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ L IPN+P + VP+G + N Sbjct: 61 AKARG--EDIEPLRLEVNALGEKLDAAKAELDKLQNEIRDLALSIPNLPDDSVPVGKNEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +NI + G+ ++H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNIEVSRWGEPRKYDFDVKDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYLEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLAEESDNSNYALIPTA 238 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 EV LTNL EI+E SLPL+ T P FRSEAGS GRDTRG++R HQF K E+ ITR Sbjct: 239 EVPLTNLVRDEILEEDSLPLKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMAQITR 297 >gi|307069548|ref|YP_003878025.1| seryl-tRNA synthetase [Candidatus Zinderia insecticola CARI] gi|306482808|gb|ADM89679.1| seryl-tRNA synthetase [Candidatus Zinderia insecticola CARI] Length = 416 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 142/425 (33%), Positives = 228/425 (53%), Gaps = 15/425 (3%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ + N +L+ LK R + ++ K +IL + ++R +N S + Sbjct: 2 IKKL--NIIYLNKLLKYRFFNINLFFFNKINNKRKILQFYLNNLRKNKNILSKKYFLNKK 59 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 N + + + ++ + + I IPN+P + + I N Sbjct: 60 NNNF-----IYKNILYINNNIKKIKNILNIFNYIINHFILSIPNIPHKSISINKY-YINN 113 Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 +I KK + H IG+ +G+ + D K++G+ F V+ LA L RA+ FMI Sbjct: 114 IIIKKTKKKKFNFKIKNHINIGKKMGISNTD-GIKITGSNFFVIKNKLAKLYRAIYNFMI 172 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-----TTDGRWLIPTSEVSLTN 238 D H ++ Y E P + ++ G+GQ PKF + +F +LIPTSEV+L N Sbjct: 173 DFHLKKNNYIEYQIPYITNKLSLIGSGQFPKFKNKIFKIKNNNEKKSFYLIPTSEVALIN 232 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + II LP++ + + FR+E S G +G++RQ+QF K ELV + S Sbjct: 233 IMRNNIISFNKLPIKMLSYSHCFRNEKISYGIKNKGLIRQYQFDKIELVQFVEPKYSQVT 292 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E+ML AE ILK++DL YR++ LC+G++ FS+CKTYDLEVWL + +Y E+SS S C + Sbjct: 293 LEKMLFHAENILKKIDLPYRIIELCSGEINFSSCKTYDLEVWLPSEKIYIEVSSISNCKD 352 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 FQ++R+N+++ + N +KF ++LN +G+A+GR I+ILENY + + IP VLR YMN Sbjct: 353 FQTKRINAKFINKNEN-IKFLNSLNATGLAIGRIFISILENYQMENEKIFIPKVLRKYMN 411 Query: 419 NLAVI 423 N+ I Sbjct: 412 NIKKI 416 >gi|195445270|ref|XP_002070251.1| GK11136 [Drosophila willistoni] gi|194166336|gb|EDW81237.1| GK11136 [Drosophila willistoni] Length = 420 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 103/353 (29%), Positives = 181/353 (51%), Gaps = 5/353 (1%) Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 KN ++ L + K + L+ I +PN + + + + S Sbjct: 55 KNNIPLIRSLLTEVRKGNQQKQQELQAEIEQLPNSTHPRLLNYGNEPRELAQYKHRQLDS 114 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 +E E+ +L L D +G + LTG LA LE+A+ QF + T +HG+ Sbjct: 115 EASK-KEFSELARSLNLYRMDHLGNYTGHKSYYLTGQLAMLEQAIIQFALQSVT-KHGFK 172 Query: 194 EVSAPLLVRDEAMYGTGQIPKFA-DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 +S P ++ E + G + ++ G L TSE++L ++ + + + LPL Sbjct: 173 LMSVPDILPPEVIESCGMRTEGERTQVYKLDTGECLSGTSEMALAGYFARKHLSEEQLPL 232 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 + T ++ +R+E S ++ +G+ R HQF K E+ +I + S E E + + K Sbjct: 233 KVTAVSRCYRAE-TSGLQEEKGIYRVHQFTKVEMFAICSPQQSEAELEEFKNIEVTLFKE 291 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 L L++R++ + +LG A + YD+E W+ G+ ++ EISSCS C ++Q++R++ +Y+ + Sbjct: 292 LGLNFRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQAKRLDIKYKRKS 351 Query: 373 SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 L HT+NG+ A+ R LIA+LE+Y N D + IP VLRP+M++ VI K Sbjct: 352 DDQLLHAHTINGTATAIPRLLIALLESYQNGD-IIEIPKVLRPFMDDQKVITK 403 >gi|240278704|gb|EER42210.1| seryl-tRNA synthetase [Ajellomyces capsulatus H143] Length = 572 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 122/501 (24%), Positives = 204/501 (40%), Gaps = 87/501 (17%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IR+N R+ S I L + R L + + + + + I Sbjct: 63 DIKHIRENASLYSENCIARNYHDLSRYPYEIQRLSTECRELQDTLREPQRKIKQIESAIA 122 Query: 60 QAIAE-----------------GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 Q +A + AL+ LK++ L +++L Sbjct: 123 QLMANSSDPHNADPREKQNQKTKAKEELSALRLSAQQLKDKSHYLTTTRAFHTKEIERLA 182 Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSA-IHLSREHFEIGEALGLMDFDRATKLSG 161 +PN+ E P G I KP+ + H IG L L++F A+ SG Sbjct: 183 LSLPNLTSTETPPGAEPRIVNYINYDPDKPANLPTHTTSHVTIGTTLNLLNFTSASLTSG 242 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD---- 217 + LT A LE+AL Q+ + + G+ VS P LV + G P+ A Sbjct: 243 WGWYYLTNEAAMLEQALIQYALSVAI-RRGWQAVSPPSLVYSHITHACGFQPRDAHNEQQ 301 Query: 218 ---------DMFCTTDGRWLIPTSEVSLTNLYSHEII----ESKSLPLRFTTLAPSFRSE 264 D+ + R L T+E+ L +++ + + + LP+R ++ +R+E Sbjct: 302 IYHIEQSERDVARSRPARCLAGTAEIPLAAIFAGQEMGGKGKGNQLPVRMVGVSRCYRAE 361 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE----------------------HERM 302 AG+ G DTRG+ R H+F K EL + + + + Sbjct: 362 AGARGADTRGLYRVHEFTKVELFGWAMPDPAGAGAGGTGTDTSAPTPAGTVTATTLFDEI 421 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ------------------ 344 L+ EIL L+L RV+ + DLG SA + D+EV + Sbjct: 422 LALQTEILTALNLPCRVLEMPAHDLGASAARKRDIEVLFPSRIASPSPHDGLSTSNATIA 481 Query: 345 ------NLYREISSCSTCGNFQSRRMNSRYR-DPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 + + E++S S C ++Q+RR+ +R + D + KF HT+NG+ +AV R + A+L Sbjct: 482 KDISVESGWGEVTSASNCTDYQTRRLGTRLKSDMAGGAGKFPHTVNGTAMAVPRIIAALL 541 Query: 398 ENYLNAD-GSVTIPTVLRPYM 417 E+ + + G V +P VLR +M Sbjct: 542 EHGWDENRGVVVLPDVLRGWM 562 >gi|115391613|ref|XP_001213311.1| hypothetical protein ATEG_04133 [Aspergillus terreus NIH2624] gi|114194235|gb|EAU35935.1| hypothetical protein ATEG_04133 [Aspergillus terreus NIH2624] Length = 709 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 101/334 (30%), Positives = 152/334 (45%), Gaps = 38/334 (11%) Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 SR H IG LGL+DF + +G + LT A LE+AL Q+ + Sbjct: 375 WVHRQPDPSRSHVAIGTTLGLIDFTSSATTTGWGWYFLTNEGALLEQALIQYAL-GVARA 433 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------------DGRWLIPTSEVSLT 237 G+ VS P +V G P+ + R L T+E+ L Sbjct: 434 RGWKPVSPPSIVYSYIAEACGFQPRDQHNEQQIWAIEQSDRDKASKPPRSLAGTAEIPLA 493 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE----- 292 +Y+ +++ LPL+ + +R+EAGS G DT+G+ R H+F K E+ + Sbjct: 494 AMYAGRDLDASVLPLKLVGPSRCYRAEAGSRGVDTKGLYRVHEFTKVEMFAWADNLESTE 553 Query: 293 ------EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ-- 344 S +L+ EIL L L RV+ + T DLG SA + D+E + Sbjct: 554 TGAENTPTSDDLFAELLAIQTEILTALGLPCRVLEMPTSDLGASATRKRDIEALFPSRLR 613 Query: 345 -----------NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 + + E++S S C ++QSRR+ +R R +K +F HT+NG+ +AV R L Sbjct: 614 ATAEGAAPELESAWGEVTSASICTDYQSRRLGTRVRGGKAKDSRFPHTVNGTAMAVPRVL 673 Query: 394 IAILENYLNAD-GSVTIPTVLRPYMNNLAVIKKE 426 AILEN +A G V +P VLR YM + I + Sbjct: 674 AAILENGWDAQRGVVVVPEVLRSYMGGIETIGPQ 707 >gi|297281888|ref|XP_001087749.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like, partial [Macaca mulatta] Length = 491 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 93/315 (29%), Positives = 150/315 (47%), Gaps = 40/315 (12%) Query: 141 HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 H ++ + + ++ ++G++ L G L LE+AL Q+ + YT + P Sbjct: 21 HVDLVVMVDGFEGEKGAMVAGSQGYFLKGVLVFLEQALTQYALRT-LGSRVYTPIYTPFF 79 Query: 201 VRDEAMYGTGQIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESK 248 +R E M Q+ +F ++++ D ++LI TSE + L+ E + + Sbjct: 80 MRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLITTSEQPIAALHRDEWLRPE 139 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCA 306 LP+++ L+ FR E GS GRDTRG+ R HQF K E + S+ E M++ A Sbjct: 140 DLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTA 199 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 EE + L + Y +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ Sbjct: 200 EEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRI 259 Query: 367 RYRDPNS------------------------KSLKFTHTLNGSGVAVGRCLIAILENYLN 402 RY K ++F H LN + A R + AILENY Sbjct: 260 RYGQTKKMMDKRKNNLHLSTQNKLEASLFSPKKVEFVHMLNATMCATTRTICAILENYQT 319 Query: 403 ADGSVTIPTVLRPYM 417 G +T+P L+ +M Sbjct: 320 EKG-ITVPEKLKEFM 333 >gi|110768100|ref|XP_001120603.1| PREDICTED: seryl-tRNA synthetase, mitochondrial [Apis mellifera] Length = 318 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 86/274 (31%), Positives = 149/274 (54%), Gaps = 7/274 (2%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G R + G LA LE AL + ++ + VS P +V E + G I ++ Sbjct: 37 GQRGYLFLGDLAELEEALI-YYTIKKLMKYNFKLVSVPDIVPTEIIERCGLILDNKKNLV 95 Query: 221 CTTDGRW----LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + L T+E+SL + + +S+ LPL+ ++ FR+E S + +G+ Sbjct: 96 YNLSPFYGDYSLSGTAEMSLAHKVMNTTFDSEDLPLKMAAVSRCFRAEI-SNLHEEKGLY 154 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R HQF K E+ ++ E+S + + + + E + L+LH+R++ + + +LG A + D Sbjct: 155 RVHQFTKVEMFVCSKHEESANQFQELQNIQENLFSSLNLHFRIIDMPSHELGSPAYRKID 214 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E W+ G+ +Y E+SSCS C ++QSRR+ +Y+ N + L + HTLNG+ A+ R LIA+ Sbjct: 215 IEGWMPGRKMYGELSSCSNCTDYQSRRLGIKYKTKNGEIL-YVHTLNGTACAIPRMLIAL 273 Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIKKEHILE 430 E+Y G +T+P +L PYM +I+K+ I + Sbjct: 274 CESYQTKHGRITVPNILAPYMTEKTLIRKQKIAD 307 >gi|312383473|gb|EFR28548.1| hypothetical protein AND_03402 [Anopheles darlingi] Length = 445 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 89/338 (26%), Positives = 158/338 (46%), Gaps = 17/338 (5%) Query: 105 IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI---GEALGLMDFDRATKLSG 161 +PN + + + + A + R H+E + + L + +G Sbjct: 94 LPNRTHPRLLSYEGKPRLVRRYNEPQIERATNDHRPHYEFGDICKRMNLYRMEALGNFTG 153 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 R L LA LE AL + ++ E + +S P L+ + G + Sbjct: 154 HRSYYLLDELAELEHALIGYTVERLLQE-QFRLISVPDLLPARIIESCGMSTTGTRNQVY 212 Query: 222 T----------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRD 271 D L TSE++L ++ + + LPLR ++ +R+E SA + Sbjct: 213 KVTSGGPADDSRDVLCLSGTSEMALAGYFAGRALPGERLPLRLAAVSRCYRAE-TSALHE 271 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 +G+ R HQF K E+ +I R + S + + ++L L + ++ + +LG A Sbjct: 272 EKGIYRVHQFTKVEMFAICRPDQSAGVLRQFRDIEVSLFEQLGLPFVLLDMPACELGAPA 331 Query: 332 CKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGR 391 + YD+E W+ G+ +Y EISSCS C ++Q+RR+ R ++ F HT+NG+ A+ R Sbjct: 332 YRKYDIEAWMPGRQMYGEISSCSDCTDYQARRLGIRV--DGAQQQPFAHTVNGTACAIPR 389 Query: 392 CLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHIL 429 LIA+LEN+ N D +V+IP L+ +M+ V+++ +L Sbjct: 390 MLIALLENFQNEDYTVSIPEPLQRHMHGKQVLRRRKVL 427 >gi|133950600|gb|ABO44033.1| seryl-tRNA synthase 2 [Toxoplasma gondii] Length = 918 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 105/311 (33%), Positives = 154/311 (49%), Gaps = 40/311 (12%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT-----SEHGYTEVSAPLL-VRDE 204 D + T+++G R S L G +A L RAL + +D +TEV P L V Sbjct: 601 TDGEATTRMAGRRHSALRGMVARLHRALKNYFLDFLLALDTEDGKKFTEVGVPPLIVSRS 660 Query: 205 AMYGTGQIPKFADDMFCTTDGR---------WLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 + GTGQ+P+ + +F +LIPT+EV L Y + I + LP+R T Sbjct: 661 TLEGTGQLPRLENGLFALPATSNNQIAGENAFLIPTAEVPLVGFYRQKRIPEEDLPIRLT 720 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 P FR E G+ GR RG+LRQ F K E V I E + EH R+ + +LK L + Sbjct: 721 AATPCFRLEDGTYGRWNRGLLRQQVFEKVESVVICTPEQAEEEHARLRKIGKTLLKELQI 780 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS-- 373 +R V LC+GD+ +A YDLE W+ + E+SS S C ++Q+RR++ +++ Sbjct: 781 PFREVLLCSGDMSATAAICYDLEAWIPSLQGFLEVSSISNCWDYQARRLSVKFQPSKGAS 840 Query: 374 ---------------------KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 +S +F TLNGS +AVGR L+A++EN+ V IP Sbjct: 841 RQQTVSSKNKEAGDAGQTSAKRSSRFCFTLNGSTLAVGRTLVAVIENHQKR--GVRIPKP 898 Query: 413 LRPYMNNLAVI 423 L+PY+ L I Sbjct: 899 LQPYLGGLEEI 909 >gi|281344092|gb|EFB19676.1| hypothetical protein PANDA_017222 [Ailuropoda melanoleuca] Length = 522 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 121/448 (27%), Positives = 201/448 (44%), Gaps = 26/448 (5%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD++ + PE AL+ R E I+S+ ++ R L ++I + + + + + Sbjct: 58 LDMESLCACPEEAARALQLRKGELRPEDLPAIISMWQELRQLREQIRRLEEEKGAVAEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + S V L+ +++QL +L +E ++ +PN + Sbjct: 118 RALLVNRDSSQVQQDPQYQSLRAHGREIRKQLMVLYPKETQLEEHFYLRALRLPNRTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VPIG + +L VG KP+ R H EI E L ++ R + +SG R L G A Sbjct: 178 VPIGDESQARVLQV-VGDKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F ++ G+T ++ P L+R G G P + Sbjct: 237 LLQHGLVNFTLN-KLIHRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ RG+ R H F K E+ Sbjct: 296 LAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETDT-GKEPRGLYRVHHFTKVEMF 354 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 355 GVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 414 Query: 346 LYREIS----SCSTCGNFQSR-RMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + E+S + + G Q + SR D ++ +N + AV R LIA+LE+ Sbjct: 415 RFGEVSPPGRASTLLGPHQPQPSWASRGHDVDASVP--LSQVNATACAVPRLLIALLESN 472 Query: 401 LNADGSVTIPTVLRPYMNNLAVIKKEHI 428 DGSV +P LRPY+ + H+ Sbjct: 473 QQEDGSVLVPPALRPYLGTDRITAPTHV 500 >gi|297279471|ref|XP_001089358.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic [Macaca mulatta] Length = 459 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 100/415 (24%), Positives = 180/415 (43%), Gaps = 45/415 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDA-----------------LKNETSTLK-------EQLPILEKEEH 92 IG+ + + D + S +K E + + E Sbjct: 63 TIGEKMKKKEPVEDDESVPENVLNFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS 373 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 415 >gi|114558191|ref|XP_001148496.1| PREDICTED: seryl-tRNA synthetase isoform 5 [Pan troglodytes] Length = 459 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 102/415 (24%), Positives = 183/415 (44%), Gaps = 45/415 (10%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+R L G L LE+AL Q+ + GY + P +R E M Q+ Sbjct: 182 GEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +F ++++ D ++LI TSE + L+ E + + LP+++ L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC 300 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYR 318 FR E GS GRDTRG+ R HQF K E + S+ E M++ AEE + L + Y Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYH 360 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS 373 +V++ +G L +A K DLE W G +RE+ SCS C ++Q+RR+ RY Sbjct: 361 IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKK 415 >gi|124805876|ref|XP_001350563.1| seryl-tRNA synthetase, putative [Plasmodium falciparum 3D7] gi|74862859|sp|Q8I5P7|SYSC_PLAF7 RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|23496687|gb|AAN36243.1|AE014846_42 seryl-tRNA synthetase, putative [Plasmodium falciparum 3D7] Length = 618 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 129/385 (33%), Positives = 213/385 (55%), Gaps = 24/385 (6%) Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 + N ++ +K ET+ + + + +E + ++ + +PN+ L +VP G + +N Sbjct: 236 KKNKIQIEEIKKETNQINKDIDHIEMNIINLKKKIEFNLYKLPNILLNKVPKGKTTEDNK 295 Query: 124 LIRSVG-------KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 +I+ + I + F + G +++L +A LER Sbjct: 296 IIKFYKKENIIQLNNEEYDFIEPHEEIIKKYENNFIFSNISNKIGFGYNILVNDIAKLER 355 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-------WLI 229 AL FMI+ H ++ YT V AP +V A++ TGQ+PKF +D+F TD +LI Sbjct: 356 ALIDFMINTHVNKFLYTYVKAPEIVTKSALFNTGQLPKFEEDLFKITDNYKLLNEDAYLI 415 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG-SAGRDTRGMLRQHQFWKCELVS 288 PTSEVSL NL+ + I+ LP++ + + FR+E + G+ ++G+LR+H F K EL++ Sbjct: 416 PTSEVSLLNLFKNSQIDYIHLPIKLVSHSSCFRTEKNNTYGKTSKGLLREHIFQKVELIN 475 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 IT ++ S +++++ + ILK+L++ YR+V L + + +SA YD+E WL Q Y Sbjct: 476 ITDKKTSPFYYKKLIKQSTYILKQLNIPYRLVLLNSIETPYSASICYDIEAWLPSQQRYV 535 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL------N 402 E+SSCS C +FQ+RR+N +Y+ +S + F HT+NGSG+AVGR L ILE Y N Sbjct: 536 EVSSCSNCLDFQARRLNLKYKIKDSNN--FCHTINGSGLAVGRVLAIILEQYQIKKKHKN 593 Query: 403 ADGSVTIPTVLRPYMNNLAVIKKEH 427 + +P VLR YMN +I+ E+ Sbjct: 594 EITKIQVPKVLRKYMN-KDIIQVEY 617 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 11/71 (15%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED-------IRARRNSNSA 56 +++ ++NP+ + LKKR +E I+ L + LI + + +R RR S Sbjct: 100 LEFFKKNPKKVVQNLKKRGMEKYLNVIVML----KKLINEKNENEVLRNKLRNRRKLLSD 155 Query: 57 QIGQAIAEGNL 67 I I Sbjct: 156 HIKNLIFNSKK 166 >gi|222832347|gb|EEE70824.1| predicted protein [Populus trichocarpa] Length = 316 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 134/319 (42%), Positives = 188/319 (58%), Gaps = 15/319 (4%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 +L+ + + L + ED++ARRNS S QIG +G E + + + L + Sbjct: 1 ALEAERKQLQTQTEDLQARRNSLSKQIGMLKGKG--EDASGPMAEVAGIGDTLKASAQRL 58 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 E+ + + IPN+P E VP G EN+ +R VG + ++H ++G LG + Sbjct: 59 AEIQDQISDAMLSIPNLPHESVPTGKDETENVEVRRVGTPRTFDFEIKDHVDVGARLG-L 117 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 DF+ ATK++G+RF+ L G +A + RAL Q M+D HT EHGYTE+ P +V +M GTGQ Sbjct: 118 DFETATKVTGSRFAFLRGGVARMHRALVQLMVDTHTLEHGYTEMYVPYIVNAASMRGTGQ 177 Query: 212 IPKFADDMFCTTD------------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 +PKF DD+F +LIPT+EV LTN+ I+ ++ LPLRF P Sbjct: 178 LPKFEDDLFKVPRKVGGEDGQDAIENFYLIPTAEVPLTNVVRDAIVAAEKLPLRFVAHTP 237 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRV 319 FRSEAGS G+DTRGM+RQHQF K E+V + E S E+M AE ILK+L+L +R Sbjct: 238 CFRSEAGSYGKDTRGMIRQHQFDKVEMVQVVPSEQSMDALEQMTGHAETILKKLELPFRT 297 Query: 320 VSLCTGDLGFSACKTYDLE 338 V LCTGD+GF + KTYD+E Sbjct: 298 VVLCTGDMGFGSTKTYDIE 316 >gi|195113975|ref|XP_002001543.1| GI10857 [Drosophila mojavensis] gi|193918137|gb|EDW17004.1| GI10857 [Drosophila mojavensis] Length = 407 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 87/324 (26%), Positives = 163/324 (50%), Gaps = 7/324 (2%) Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGA 162 +PN + + + +P ++E E+ L L + +G Sbjct: 71 QQLPNATHPRLLTYDNKAMELAKFEHRLQP---ERAKEFSELARTLNLYRMEHLGNYTGH 127 Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA-DDMFC 221 + L G LA LE+A+ Q+ + T + + +S P L+ + G + ++ Sbjct: 128 KSYYLMGQLAMLEQAIIQYALKSLT-RNKFNLISVPDLLPRGIIESCGMRTEGERTQVYK 186 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 G L TSE++L +++ + + LPL+ ++ +R+E S + +G+ R HQF Sbjct: 187 LDIGECLSGTSEMALAGYFANRQLTERELPLKVAAVSRCYRAE-TSGLHEEKGIYRVHQF 245 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 K E+ +I + S E + + ++ K+L +++R++ + +LG A + YD+E W+ Sbjct: 246 TKVEMFAIATADQSEPTLEELKNIEIDLFKQLGINFRLLDMPPCELGAPAYQKYDIEAWM 305 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 G+ ++ EISSCS C ++Q++R+N Y+ ++ + HTLNG+ A+ R LIA++E+Y Sbjct: 306 PGRQMWGEISSCSNCTDYQAKRLNITYKRACDGAVVYVHTLNGTATAIPRLLIALIESYQ 365 Query: 402 NADGSVTIPTVLRPYMNNLAVIKK 425 + D + IP VL P+MN I K Sbjct: 366 SGD-HIQIPEVLVPFMNEQRAITK 388 >gi|154312138|ref|XP_001555397.1| hypothetical protein BC1G_06102 [Botryotinia fuckeliana B05.10] gi|150850065|gb|EDN25258.1| hypothetical protein BC1G_06102 [Botryotinia fuckeliana B05.10] Length = 271 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 78/227 (34%), Positives = 123/227 (54%), Gaps = 9/227 (3%) Query: 206 MYGTGQIPKFADDMFCT-----TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 M T Q+ +F ++++ + ++LI TSE ++ ++ E + +K +P+R+ + Sbjct: 1 MAKTAQLEQFDEELYKVVDGDAQNDKYLIATSEQPISAFHADEWLTAKDMPIRYAGFSSC 60 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 +R EAGS GRD G+ R HQF K E +T E S+ E +RM+S +EE + L + YRVV Sbjct: 61 YRREAGSHGRDAWGIFRVHQFEKIEQFVLTDPEKSWEEFDRMISFSEEFYQSLGVPYRVV 120 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY--RDPNSKSLKF 378 ++ +G L +A K YDLE W Q Y+E+ SCS C ++QSR + RY + + Sbjct: 121 AIVSGALNNAAAKKYDLEAWFPFQGEYKELVSCSNCTDYQSRALEIRYGPKTQTGIRKNY 180 Query: 379 THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL-AVIK 424 H LN + A R L +LEN+ +G +P LR Y+ I Sbjct: 181 VHALNSTLCATERALCCLLENFQTEEG-FNVPAPLRKYLPGAPEFIP 226 >gi|207091888|ref|ZP_03239675.1| seryl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1] Length = 179 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 98/181 (54%), Positives = 127/181 (70%), Gaps = 2/181 (1%) Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 TNLY+ II ++LP++ T P FRSEAGSAG+DTRGM+RQHQF K ELV+IT ++S Sbjct: 1 TNLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESD 60 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E ML A ILK L+L +R V LC+GDLGFSA T D+EVWL GQN YREISS S Sbjct: 61 AMQEHMLESASTILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNT 120 Query: 357 GNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +FQ+RR R++ ++ + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Y Sbjct: 121 RDFQARRAKIRFK--ENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKY 178 Query: 417 M 417 + Sbjct: 179 L 179 >gi|307212972|gb|EFN88554.1| Seryl-tRNA synthetase, mitochondrial [Harpegnathos saltator] Length = 431 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 104/425 (24%), Positives = 177/425 (41%), Gaps = 66/425 (15%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 N + + +K+R +L L Sbjct: 52 NRDTILNNIKRRKSIGDINRVLEL------------------------------SDKPEK 81 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 + L E S + PN I + ++ G Sbjct: 82 RELLSKELSRI-------------------------PNCTH--SAIFEYGDTPKFLKEYG 114 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 +KP +E E+ L L+ ++G + +L G LA LE AL ++ + + Sbjct: 115 EKPEYDFEPQEFTELANHLRLIRT-GLGPVAGQKAYMLLGDLARLEEALVRYTV-KKLLK 172 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW-----LIPTSEVSLTNLYSHEI 244 +G+ +S P +V E + G I + A + D + L T+E++L + I Sbjct: 173 NGFQLLSVPDIVPTELINRCGLIMEGARTLVYNLDPYYGDDYSLSGTAEIALAGRMMNTI 232 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LPL+ ++ +R+E + D RG+ R HQF K E+ S + + Sbjct: 233 LSRDELPLKLVAVSRCYRAETST-KLDERGIYRVHQFTKVEMFVCCEPLQSEEVFHDLRN 291 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRM 364 EE+ L LH+RV+ + DLG SA + D+E W+ G+ +Y E+SSCS C ++QSRR+ Sbjct: 292 MQEELFSSLGLHFRVMDMPPTDLGTSAYRKSDIEGWMPGRKMYGELSSCSNCTDYQSRRL 351 Query: 365 NSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 N +Y+ + + HTLNG+ A+ R LIA+ E+Y +T+P L P M + +I+ Sbjct: 352 NIKYKTEDGGTAH-VHTLNGTACAIPRMLIALCESYQTKHARITVPKSLVPLMKDKTLIR 410 Query: 425 KEHIL 429 K+ + Sbjct: 411 KQPVA 415 >gi|39978057|ref|XP_370416.1| hypothetical protein MGG_06913 [Magnaporthe oryzae 70-15] gi|145013518|gb|EDJ98159.1| hypothetical protein MGG_06913 [Magnaporthe oryzae 70-15] Length = 443 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 98/422 (23%), Positives = 166/422 (39%), Gaps = 63/422 (14%) Query: 10 NPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 NPE + + ++RH + + I+++ + +R + A+ N Q + Sbjct: 15 NPEKIRESQRRRHAPVEVVDEIIAMWDDHRRTQYAATQMNAQINDV--QKKIGAKKKAKE 72 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 E L++ L E L K ++ I N+ + VP+ + + N +IR+ Sbjct: 73 DASEFLQEKIALEKAKKELIDSAAEKQKILDKKLTTIGNIVHDSVPVSDNEDNNEIIRTY 132 Query: 129 GKKPSAIHLSRE--HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 + + H E+ L D DR K G R L L +A+ F ++ Sbjct: 133 CPEGLTVEKRECLSHHEVLTRLDGYDPDRGIKAVGHRGYFLRQWGVFLNQAIINFGLEF- 191 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSLTNLYSHE 243 S + + P + + M T Q+ +F ++++ D ++LI TSE ++ +++E Sbjct: 192 LSSKSFVPLQPPFFLLKDQMSKTAQLEQFDEELYKVVDGEADKYLIATSEQPISVYHANE 251 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR+ + FR EAG GRD G R QF + Sbjct: 252 WLLPQDLPLRYAGYSTCFRKEAGGPGRDVWGTFRVSQFDRI------------------- 292 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRR 363 V++ +G L +A K +DLE W Q Y+E+ SCS C Sbjct: 293 ----------------VAIVSGALNNAAAKKFDLEAWFPFQGEYKELVSCSNCT------ 330 Query: 364 MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNL-AV 422 ++ H LN + A R + A+LENY DG +P LR Y+ Sbjct: 331 -----------KKEYVHCLNSTLTATSRTMCALLENYQTEDG-FKVPEPLRKYLPGAPEF 378 Query: 423 IK 424 I Sbjct: 379 IP 380 >gi|313606203|gb|EFR83215.1| seryl-tRNA synthetase [Listeria monocytogenes FSL F2-208] Length = 153 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 82/150 (54%), Positives = 107/150 (71%) Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 ++RQHQF K ELV + EDS+ E++ AEE+L+RL+L YRV+S+CT DLGF+A K Sbjct: 1 LIRQHQFNKVELVQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKK 60 Query: 335 YDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLI 394 YDLEVW+ N YREISSCS +FQ+RR N R+R ++ HTLNGSG+A+GR + Sbjct: 61 YDLEVWIPSYNSYREISSCSNFESFQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVA 120 Query: 395 AILENYLNADGSVTIPTVLRPYMNNLAVIK 424 AILENY +ADGSV IP VL+ YM + I+ Sbjct: 121 AILENYQDADGSVRIPKVLQGYMGGIEKIE 150 >gi|323309504|gb|EGA62715.1| Ses1p [Saccharomyces cerevisiae FostersO] Length = 250 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 86/226 (38%), Positives = 123/226 (54%), Gaps = 8/226 (3%) Query: 201 VRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSLTNLYSHEIIESKS--LPLRFT 255 + E M T Q+ +F ++++ D ++LI TSE ++ +S E E LP+ + Sbjct: 1 MNKELMSKTAQLSEFDEELYKVIDGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYV 60 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + FR EAGS G+D G+ R H F K E IT E S+ E E+M+S +EE K L L Sbjct: 61 GYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKL 120 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNS 373 YR+V + +G+L +A K YDLE W Q Y+E+ SCS C ++QSR + R + Sbjct: 121 PYRIVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGD 180 Query: 374 KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 + K+ H LN + A R L ILENY DG V +P VLR Y+ Sbjct: 181 REKKYVHCLNSTLAATQRALCCILENYQTEDGLV-VPEVLRKYIPG 225 >gi|147815827|emb|CAN70424.1| hypothetical protein VITISV_000798 [Vitis vinifera] Length = 235 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 66/166 (39%), Positives = 93/166 (56%), Gaps = 11/166 (6%) Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 RG+ R HQF K E+ I + EDS + HE ++ E++ L LH++ + + +GDLG A Sbjct: 68 CRGLYRVHQFTKVEMFIICQPEDSNSYHEELIGIEEDLFSSLGLHFKTLDMASGDLGAPA 127 Query: 332 CKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS-----------KSLKFTH 380 + YD+E W+ G Y EISS S C ++QSRR+ RYR S +F H Sbjct: 128 YRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPSESLSMNPKRGMNLAPTQFVH 187 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 TLN + AV R ++ +LENY DG+V IP LRP+M L I + Sbjct: 188 TLNATACAVPRMIVCLLENYQQEDGNVIIPEPLRPFMGGLERITPK 233 >gi|301784061|ref|XP_002927448.1| PREDICTED: seryl-tRNA synthetase, mitochondrial-like [Ailuropoda melanoleuca] Length = 487 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 115/443 (25%), Positives = 189/443 (42%), Gaps = 51/443 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD++ + PE AL+ R E I+S+ ++ R L ++I + + + + + Sbjct: 58 LDMESLCACPEEAARALQLRKGELRPEDLPAIISMWQELRQLREQIRRLEEEKGAVAEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + S V L+ +++QL +L +E ++ +PN + Sbjct: 118 RALLVNRDSSQVQQDPQYQSLRAHGREIRKQLMVLYPKETQLEEHFYLRALRLPNRTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VPIG + +L VG KP+ R H EI E L ++ R + +SG R L G A Sbjct: 178 VPIGDESQARVLQV-VGDKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGA 236 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 L+ L F ++ G+T ++ P L+R G G P + Sbjct: 237 LLQHGLVNFTLN-KLIHRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLN 295 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T+EV L + + + LP+R + +R+E + G++ RG+ R H F K E+ Sbjct: 296 LAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETDT-GKEPRGLYRVHHFTKVEMF 354 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 355 GVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 414 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E+ N + AV R LIA+LE+ DG Sbjct: 415 RFGEV--------------------------------NATACAVPRLLIALLESNQQEDG 442 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P LRPY+ + H+ Sbjct: 443 SVLVPPALRPYLGTDRITAPTHV 465 >gi|297276980|ref|XP_001085926.2| PREDICTED: seryl-tRNA synthetase, mitochondrial [Macaca mulatta] Length = 488 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 110/443 (24%), Positives = 181/443 (40%), Gaps = 50/443 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+W PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDIEWFCACPEEAARALELRKGELRSADLPAIISTWQELRQLREEIRRLEEEKEAVTEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +A + V L+ +++ L L E ++ +PN + Sbjct: 118 RALLANQDSGEVQQDHRYQSLRARGREMRKGLFPLYPREAQLEEQFYLQALKLPNQTHPD 177 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 VP+G + +L K E+ G D Sbjct: 178 VPVGDESQAQVLHVVGDKPGGLPGGGGIEAELRGPSGDGDD------------------- 218 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRW 227 S G+T ++ P L+R G G P + Sbjct: 219 -------------LFSALGFTPMTVPDLLRGAVFEGCGMTPNANPSHIYNIDPARFEDLN 265 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L T L + + + LP+R + +RSE + G++ RG+ R H F K E+ Sbjct: 266 LXXTLWSLLPGYFMDPPVAFRDLPVRMVCSSTCYRSETNT-GQEPRGLYRVHHFTKVEMF 324 Query: 288 SITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 +T E S E LS EIL L LH+RV+ + T +LG A + +D+E W+ G+ Sbjct: 325 GVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRG 384 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 + E++S S C +FQSRR++ ++ + L+F HT+N + AV R LIA+LE+ DG Sbjct: 385 RFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNATACAVPRLLIALLESNQQKDG 443 Query: 406 SVTIPTVLRPYMNNLAVIKKEHI 428 SV +P L+PY+ + H+ Sbjct: 444 SVLVPPALQPYLGTDRITAPTHV 466 >gi|323305586|gb|EGA59327.1| Ses1p [Saccharomyces cerevisiae FostersB] Length = 250 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 86/226 (38%), Positives = 123/226 (54%), Gaps = 8/226 (3%) Query: 201 VRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSLTNLYSHEIIESKS--LPLRFT 255 + E M T Q+ +F ++++ D ++LI TSE ++ +S E E LP+ + Sbjct: 1 MNKELMSKTAQLSEFDEELYKVIDGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHYV 60 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + FR EAGS G+D G+ R H F K E IT E S+ E E+M+S +EE K L L Sbjct: 61 GYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKL 120 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR--YRDPNS 373 YR+V + +G+L +A K YDLE W Q Y+E+ SCS C ++QSR + R + Sbjct: 121 PYRIVGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGD 180 Query: 374 KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 + K+ H LN + A R L ILENY DG V +P VLR Y+ Sbjct: 181 REKKYVHCLNSTLAATQRALCCILENYQTEDGLV-VPEVLRKYIPG 225 >gi|225439026|ref|XP_002264263.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 207 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 68/177 (38%), Positives = 97/177 (54%), Gaps = 14/177 (7%) Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 FR S ++ G+ R HQF K E+ I + EDS + HE ++ E++ L LH++ + Sbjct: 19 FRR-QSSYLKE--GLYRVHQFTKVEMFIICQPEDSNSYHEELIGIEEDLFSSLGLHFKTL 75 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS------- 373 + +GDLG A + YD+E W+ G Y EISS S C ++QSRR+ RYR S Sbjct: 76 DMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPSESLSMNPKR 135 Query: 374 ----KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 +F HTLN + AV R ++ +LENY DG+V IP LRP+M L I + Sbjct: 136 GMNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGNVIIPEPLRPFMGGLERITPK 192 >gi|330040421|ref|XP_003239904.1| seryl-tRNA synthetase (serin-tRNA ligase) [Cryptomonas paramecium] gi|327206830|gb|AEA39006.1| seryl-tRNA synthetase (serin-tRNA ligase) [Cryptomonas paramecium] Length = 442 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 108/435 (24%), Positives = 201/435 (46%), Gaps = 28/435 (6%) Query: 1 MLDIQWI----RQNP-EHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSN 54 M+D + + N + + + +R +E + E I+ L K E I+ N Sbjct: 1 MIDSRIFFLKQQTNFSDIIRGSQCRRCVEKSKVEQIIILSHYYNKNKIKWERIKYVINVF 60 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTL---KEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 S +I + + +K + KE++ +LEK+ + K LI+ I N+ Sbjct: 61 SKKI----------IFNMIKERVVFVNYSKEKINLLEKKMFTYQNINKFLITSIGNLVHN 110 Query: 112 EVPIGTSANEN--ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 + + I ++ + + + H ++ + +++ + +SG R L Sbjct: 111 SSMFSMKVSNSKLIFLKQISIEKKQKLIFLNHVDLLSQVEGVEYQKGIVISGNRGYFLKK 170 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG--RW 227 L AL Q+ +D + + + P ++ M Q+ F + ++C + ++ Sbjct: 171 LGLLLNAALIQYSLDF-LQKRNFVPIQTPYFMKKNIMMKCAQLEDFKEQLYCIKEETEKF 229 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 LI TSE ++ L+ ++ I K+LP+++ + FR E+GS G+DT G+ R HQF K E Sbjct: 230 LIATSEQPISALHVNQKILKKNLPIKYAGFSSCFRKESGSHGKDTAGIFRVHQFEKIEQF 289 Query: 288 SITREED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 I E+ S+ + +L A + L++ ++V+++ + +A K D+ W N Sbjct: 290 IICEREEISSWVFFQEILKNARDFYFLLNIPFKVINISSTTFNNTASKKADVLGWFPASN 349 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDP-NSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 +RE+ SCS C +FQ+R +N ++K+ KF + LN + A R + ILENY D Sbjct: 350 TFRELVSCSNCTDFQARNLNIISDTNFHTKNNKFVYMLNSTLCATTRVICCILENYQ-FD 408 Query: 405 GSVTIPTVLRPYMNN 419 + IP VL+ YM N Sbjct: 409 KFIHIPRVLKKYMGN 423 >gi|169836237|ref|ZP_02869425.1| seryl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 318 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 116/308 (37%), Positives = 181/308 (58%), Gaps = 3/308 (0%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML++++IR+N + + LK R+ + + +L LDE R L++++E ++ RN +S+ IG+ Sbjct: 1 MLEMRYIRENADKIKEYLKNRNSDFDLDSLLKLDEDRRNLLQEVEILKKERNESSSLIGK 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 EG L T+ ++ L+++ E+ +L IPN + PIG + Sbjct: 61 YKQEGKDP--AELLARMQTVSAKIKELDQKVAEIDEKQVQLAYTIPNKLSDTTPIGKDED 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ +R G + H E+G LG++DF+R KL G+RF+V A LERAL Sbjct: 119 ENVEVRKWGTPREFDFEIKSHDELGVNLGILDFERGAKLGGSRFTVYKNAAARLERALIA 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 FMID+HT E + E+ P LV+ E M GTGQ+PKFA+D + + +LIPT+EV+LTNL Sbjct: 179 FMIDIHTQEEDFEEIFTPQLVKKEMMVGTGQLPKFAEDAYKIEGEEMYLIPTAEVTLTNL 238 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ EI++ + LP + FR EAGS GRD +G++RQHQF K E+V + + E S+ E Sbjct: 239 HNGEILDEEELPKHYCGYTACFRKEAGSGGRDLKGLIRQHQFNKVEMVKMVKPETSYDEL 298 Query: 300 ERMLSCAE 307 E M+ + Sbjct: 299 ESMVKIVQ 306 >gi|320592939|gb|EFX05348.1| seryl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 591 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 125/515 (24%), Positives = 205/515 (39%), Gaps = 96/515 (18%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +D++ IRQN E +R+ + I+ L + +R N ++ Sbjct: 73 IDLRHIRQNAELHAANCVRRNYGALRDSPARIVDLFAAWQTRQHDGRALREEANVVRRRL 132 Query: 59 GQAIAEGNLSLV----------DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + V D L LK+QL +E +E + + +++L + +PN+ Sbjct: 133 ANPPVAREVEEVVAIQDAQCSRDTLLERARVLKQQLAGIEADEAHLTAEMQQLAAALPNL 192 Query: 109 PLEEVPIGTSANENILIR------------SVGKKPSAIHLSREHFEIGEALGLMDFDRA 156 + P G + + R H IG LGL+DF A Sbjct: 193 TSTDTPDGMHTLLCYINCDGEAAGEAVSLLRRHHHNTRSGRWRSHVHIGTELGLLDFAAA 252 Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 SG + L G A LE+AL Q+ I + HG+ VS P LVR G P+ Sbjct: 253 ATTSGWGWYYLLGDGARLEQALVQYAIAV-AHRHGWQLVSPPSLVRSSVAAACGFQPRDQ 311 Query: 217 --DDMFCTTDG-----------------RWLIPTSEVSLTNLYSHEIIESKSL------- 250 + T DG L T+E+ L LY+ + S + Sbjct: 312 GGEQQTYTIDGAGAGGGSSPDTAATGISMSLTATAEIPLAALYADTTLPSSATSATSDDS 371 Query: 251 ----------------PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE-- 292 P+R ++ +R+EAG+ G T+G+ R H+F K EL + T Sbjct: 372 ATTIASSDSSNTTSFNPIRRVAVSRCYRAEAGARGAATKGLYRVHEFTKVELFAWTAPDL 431 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ-------- 344 + + + ++ EIL LDL RV+ + DLG SA + D+E + + Sbjct: 432 DAATEVFDELVDIQTEILSSLDLPCRVLEMPASDLGASAYRKIDIEAFFPSRCGAVADAV 491 Query: 345 ---------------NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAV 389 + E++S S C ++Q+RR+ +R R +L + TLNG+ +AV Sbjct: 492 ADPQGDPPTDIALIDAGWGEVTSASICTDYQTRRLATRTRI--DGALVYPWTLNGTALAV 549 Query: 390 GRCLIAILENYLNAD-GSVTIPTVLRPYMNNLAVI 423 R + A+LEN + + +V IP L+P+M+ I Sbjct: 550 PRIIAALLENGWDEEAKTVAIPECLQPWMDGQEFI 584 >gi|237733427|ref|ZP_04563908.1| seryl-tRNA synthetase [Mollicutes bacterium D7] gi|229383462|gb|EEO33553.1| seryl-tRNA synthetase [Coprobacillus sp. D7] Length = 171 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 2/173 (1%) Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 +T+ +P FR E G+ G + RG+ R HQF K E++ + + EDS E++ + ++ + Sbjct: 1 TYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSKMWFEKLWNNTVDLFRS 60 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 LD+ R + C+GDL K+ D+E W Q Y E+ SCS + Q+RR+N R N Sbjct: 61 LDIPVRTLECCSGDLADLKSKSIDVEAWSPRQKKYFEVGSCSNLTDAQARRLNIRINGEN 120 Query: 373 SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 K F HTLN + VA R LIA LEN LN DGSV IP L+PYM I K Sbjct: 121 GK--YFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPKALQPYMGGKEKITK 171 >gi|71032093|ref|XP_765688.1| seryl-tRNA synthetase [Theileria parva strain Muguga] gi|68352645|gb|EAN33405.1| seryl-tRNA synthetase, putative [Theileria parva] Length = 585 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 130/428 (30%), Positives = 201/428 (46%), Gaps = 31/428 (7%) Query: 11 PEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IGQAIAEGN 66 PE R + + I SL + ++ +I + A ++ +S I + Sbjct: 166 PELFQSNFLLRGEDHWSELIQIRSLFRRKTEILNQISKLTAEKSDSSKTFFIKNCVNSLL 225 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 S++ +N+ LK +L +E+E L L +PN+ EV + + Sbjct: 226 RSVIIGARNKIRELKSELNTVEQE-------LTALRLKLPNLLHPEVTDNNTVLKPAKYS 278 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 + S +H ++ L +RA +SG FS LA L RAL + +D Sbjct: 279 NNAVLKSK----LDHVDVINRLCPRYIERAVSISGKGFSSYCTPLATLSRALVNYFLDTL 334 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-------CTTDGRWLIPTSEVSLTNL 239 T YTEV PL+V + TG +P F D+++ + +LIPTSEVSL L Sbjct: 335 TRLFDYTEVVVPLIVTKSTLELTGHLPYFEDNLYKLDDSNVFNGETGYLIPTSEVSLLGL 394 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + ++ SLP FT + FR E G + RG++RQHQF K EL+ + S H Sbjct: 395 FKGGKFKANSLPKFFTAYSECFRKEIQDYGANARGLIRQHQFGKVELLCFCPPDSSEYAH 454 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 MLS E +L +L+L Y+ V L + G + KT D EV L +N + E+SSCS +F Sbjct: 455 SLMLSHIEFLLNQLELPYQQVLLSAKETGHTCSKTIDCEVPLPSKNFFLELSSCSNTKDF 514 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY--LNADG--SVTIPTVLRP 415 Q+ +N + +L H++NGSG+A+GR + A+LE +G V IP L+ Sbjct: 515 QTNPLNI-----TTDTLNRVHSVNGSGLAIGRTITALLEYNTIKRENGLIQVKIPKPLQQ 569 Query: 416 YMNNLAVI 423 Y+NN +I Sbjct: 570 YLNNSTLI 577 >gi|71407799|ref|XP_806343.1| seryl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70870063|gb|EAN84492.1| seryl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 227 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 113/205 (55%), Gaps = 8/205 (3%) Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LI TSE+ + + + PL++ ++ FR EAG+ GRDT G+ R HQF K E Sbjct: 10 YLIATSEMPIAAYHRGKWFTELKEPLKYAGMSSCFRKEAGAHGRDTLGIFRVHQFDKLEQ 69 Query: 287 VSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + E+S+ E M+ +EE + L L YR +++C+G L +A K YD+E W Sbjct: 70 FLVCSPREEESWRHLEEMIRTSEEFCESLGLPYRTINICSGALNNAAAKKYDVEAWFPAS 129 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRD-----PNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 +RE+ SCS C ++Q+R +N R+ + ++ H LNG+ A+ R + I EN Sbjct: 130 GAFRELVSCSNCTDYQARGVNCRFGPNLRNVSANNVKEYCHMLNGTLCAITRTMCCICEN 189 Query: 400 YLNADGSVTIPTVLRPYMNNLAVIK 424 Y +G V IP VLRPYM L ++K Sbjct: 190 YQTEEG-VVIPDVLRPYMMGLEMLK 213 >gi|312066545|ref|XP_003136321.1| seryl-tRNA synthetase [Loa loa] gi|307768516|gb|EFO27750.1| seryl-tRNA synthetase [Loa loa] Length = 417 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 99/394 (25%), Positives = 168/394 (42%), Gaps = 23/394 (5%) Query: 17 ALKKRHLEPQSEYIL--SLDEKNRILIKKIEDIRARRN-SNSAQ-IGQAIAEGNLSLVDA 72 +LK+R L S LD + + +N + I G++ V Sbjct: 2 SLKRRLLNSISNAFSRPELD---------FDFLLNEKNLDLIKENIRCRKGIGDIDAVHR 52 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 L + + E+E + L K IPN+ V G N +++ K+ Sbjct: 53 LWKQIQDYSGKPKQSEQEYQSLWDKLYKEAMLIPNLCHPSVAKGNFLNAHVIRFFGEKRK 112 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 + E G R G LA +E AL ++ + + G+ Sbjct: 113 DDNLETAETIAKAWKA----LYNPLNACGERSYAFIGPLADMELALLDYVSSV-LEQKGF 167 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKS 249 + P +V + G G + D+ L TSE+ L++L S + Sbjct: 168 LPIVVPDIVHESIPEGCGLQQRSEKDILYRLRDYSDFCLSGTSEMGLSSLVSGRVFGYDE 227 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LPL+ L+ FR E + +++ + R H+F K E+ I E +S + + ++ I Sbjct: 228 LPLKLKALSRCFRPEIATNAAESK-LYRVHEFNKVEMFVICNENESDLQLDELVEVQTSI 286 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR 369 L LH R++ + + +LG SA + +D+E W+ G+ ++ E+SS S C ++Q+RR++ +YR Sbjct: 287 FSSLGLHCRLLDMPSEELGASAARKFDIEAWMPGRKMFGEVSSASNCTDYQARRLSIKYR 346 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 D N KF HT N + VA R LIA+LE Y + Sbjct: 347 DSNG-VEKFAHTCNATAVATTRTLIALLETYQDE 379 >gi|325090380|gb|EGC43690.1| seryl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 566 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 114/487 (23%), Positives = 193/487 (39%), Gaps = 86/487 (17%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IR+N R+ S I L + R L + + + + + I Sbjct: 63 DIKHIRENASLYSENCIARNYHDLSRYPYEIQRLSTECRELQDTLREPQRKIKQIESAIA 122 Query: 60 QAIAE-----------------GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 Q +A + AL+ LK++ L +++L Sbjct: 123 QLMANSSDPHNADPREKQNQETKAKEELSALRLSAQHLKDKSHYLTTTRAFHTKEIERLA 182 Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSA-IHLSREHFEIGEALGLMDFDRATKLSG 161 +PN+ E P G I KP+ + H IG L L++F A+ SG Sbjct: 183 LSLPNLTSTETPPGAEPRIVNYINYDPDKPANLPTHTTSHVTIGTTLNLLNFTSASLTSG 242 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 + LT A LE+AL Q+ + + G+ VS P LV + G P+ A + Sbjct: 243 WGWYYLTNEAALLEQALIQYALSVAI-RRGWQAVSPPSLVYSHITHACGFQPRDAHNEQQ 301 Query: 222 TTDG-------------RWLIPTSEVSLTNLYSHEII----ESKSLPLRFTTLAPSFRSE 264 R L T+E+ L +++ + + + LP+R ++ +R+E Sbjct: 302 IYHIEQSERDVARGRPARCLAGTAEIPLAAIFAGQEMGGKGKGNQLPVRMVGVSRCYRAE 361 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE----------------------HERM 302 AG+ G DTRG+ R H+F K EL + + + + Sbjct: 362 AGARGADTRGLYRVHEFTKVELFGWAMPDPAGAGAGGTGTDTSAPTPAGTVTATTLFDEI 421 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ------------------ 344 L+ EIL L+L RV+ + DLG SA + D+EV + Sbjct: 422 LALQTEILTALNLPCRVLEMPAHDLGASAARKRDIEVLFPSRIASPSPHDGLSTSNATIA 481 Query: 345 ------NLYREISSCSTCGNFQSRRMNSRYR-DPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 + + E++S S C ++Q+RR+ +R + D + KF HT+NG+ +AV R + A+L Sbjct: 482 KDISVESGWGEVTSASNCTDYQTRRLGTRLKSDMAGGAGKFPHTVNGTAMAVPRIIAALL 541 Query: 398 ENYLNAD 404 E+ + + Sbjct: 542 EHGWDEN 548 >gi|164658700|ref|XP_001730475.1| hypothetical protein MGL_2271 [Malassezia globosa CBS 7966] gi|159104371|gb|EDP43261.1| hypothetical protein MGL_2271 [Malassezia globosa CBS 7966] Length = 700 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 114/477 (23%), Positives = 193/477 (40%), Gaps = 69/477 (14%) Query: 9 QNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE- 64 ++ E R + + + + SL + + I + A I + Sbjct: 25 EDVEEARRVTLLRDMSFREDEAAALPSLQASLKQMRYDRIKIEEEQRHVGAMIPSLAKKV 84 Query: 65 -GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 N V L+ L+ L LEK+ E + ++ S PN +VPIG + + Sbjct: 85 NTNAERVSQLRERARELRTALRYLEKQMDEAHARSLQIRSAWPNRMHPDVPIGPESESRV 144 Query: 124 LIRSVGKKPSAIHLSREHFEIG----------------------------EALGLMDFDR 155 + + P+ S + + G +D Sbjct: 145 VAVCDARSPACRSTSLPTTLLPCTTHAFDASFTSKLQVDPRRDHLGLAQSMSHGGVDMAA 204 Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 +G + L G ++ LE AL Q+ + + T HG+ VS P +++ + G P+ Sbjct: 205 GITTTGPSWPYLLGTISMLEHALCQYALHVAT-RHGFIPVSVPDVIKTDVAERCGFRPRD 263 Query: 216 A-------------------DDMFCTTDGRWLIPTSEVSLTNLYSHEIIES--------- 247 L T+E+ L L + + Sbjct: 264 EVAAQTYFVDTKRSITTHDTSACDDAMATLCLAGTAEIPLAALVAKQTFSHRHTQPNLGG 323 Query: 248 ----KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 LP+R T L +FR+EAG+ G DTRG+ R HQF K E+ ++ E S E + Sbjct: 324 DVASMHLPIRLTALGHAFRAEAGARGADTRGLYRIHQFSKVEMFVVSDAEQSDAMLESLR 383 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRR 363 E+I+ L L YRVV + + +LG SA + YD+E W+ G+ + EI S S C +Q+RR Sbjct: 384 HVQEDIVNGLGLLYRVVDMSSEELGASAYRKYDIEAWMPGRGAWGEICSASNCTEYQARR 443 Query: 364 MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP-YMNN 419 + +YRD + + HTLN + A+ R L+A++E Y +++ + +P LRP ++ Sbjct: 444 LAIKYRDAETGRNTYAHTLNATAAAIPRLLVALIETYSSSN--LVLPVALRPFWIGG 498 >gi|256370631|ref|YP_003108456.1| seryl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM] gi|256009423|gb|ACU52783.1| seryl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM] Length = 425 Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 10/415 (2%) Query: 6 WIRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 +I++ + + LKK++ +IL +++ + + KI ++ N S +I + Sbjct: 5 FIKEEKKEICRRLKKKNFYNFFIINFILKNEKQKKKIKLKINNLFFYINFFSKKILLFLK 64 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 + +K+ + LK+++ +K ++ L + IPN+P +E+ T+ Sbjct: 65 NKYFLELKLIKSYSFFLKKKIKSYKKIIKKINIKLINNLIKIPNIPSKEIKKKTNIVLYQ 124 Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 K H+E+G+ L + + +SG F+VL A +R+L QF + Sbjct: 125 NFD----KKKIKQNLLTHWELGKKFKLFCLKQGSIISGNGFNVLINTGALYQRSLIQFFL 180 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNLYSH 242 + + GY E P +V ++YGTGQ P + M+ D +LIPT EV L N++ + Sbjct: 181 EKNIIS-GYIEYILPFIVNKNSVYGTGQFPDKENQMYNINYDNLYLIPTGEVPLINIFKN 239 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 +I + LPL+ TT FR E+GS G + RG+ R HQF K E+V I+ S+ M Sbjct: 240 KIFKESELPLKGTTNTSCFRRESGSYGTNVRGLNRLHQFEKVEIVQISTCYYSYYSFYEM 299 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSR 362 ++ + IL L L +R++ LC +LGF++ TYD EV+ GQ + E+SS S C NFQS Sbjct: 300 VNHIKYILLSLKLKFRIIQLCGNELGFTSALTYDFEVYSPGQKKWLEVSSVSNCRNFQSN 359 Query: 363 RMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 R+N +YR ++ H+LNGS +A+ R ++ENY N + + IP L M Sbjct: 360 RLNIKYRSIKGN-IQDCHSLNGSSLAIPRIFSTLIENYQNRN-YILIPKELIKLM 412 >gi|68063117|ref|XP_673568.1| seryl-tRNA synthetase [Plasmodium berghei strain ANKA] gi|56491512|emb|CAI01487.1| seryl-tRNA synthetase, putative [Plasmodium berghei] Length = 295 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 113/279 (40%), Positives = 171/279 (61%), Gaps = 16/279 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + G +++L ++A+LERAL FMI++HT++ YT V AP ++ A+ TGQ+ Sbjct: 12 FKNISNKIGFGYNILVNNIANLERALINFMINVHTNKFNYTYVKAPTIISRSALTNTGQL 71 Query: 213 PKFADDMFCTTDGR-------WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 PKF +D+F +LIPTSEVSL NL+ + +IE + LP++ + +P FR E Sbjct: 72 PKFENDLFKINQDYKILNEEAFLIPTSEVSLLNLFKNSLIEHEHLPIKLVSHSPCFRIEK 131 Query: 266 G-SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 + G+ ++G+LR+H F K EL+SIT + SF ++ ++ E ILK+L + YR+V L + Sbjct: 132 NYTYGKTSKGLLREHIFEKVELISITDKITSFLHYKNLIKHCEYILKKLKIPYRLVLLNS 191 Query: 325 GDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNG 384 + FSA YD+E WL Q + E+SSCS C +FQ+R++N +++ + F HT+NG Sbjct: 192 IETPFSASICYDIEAWLPSQKRFLEVSSCSNCLDFQARKLNLKFKKND--KSLFCHTING 249 Query: 385 SGVAVGRCLIAILENYLNADGS------VTIPTVLRPYM 417 SG+AVGR L ILE Y S +T+P VLR YM Sbjct: 250 SGLAVGRVLAIILEQYQIKRSSKNDKIRLTVPKVLRRYM 288 >gi|162606512|ref|XP_001713286.1| seryl-tRNA synthetase (serin-tRNA ligase) [Guillardia theta] gi|12580752|emb|CAC27070.1| seryl-tRNA synthetase (serin-tRNA ligase) [Guillardia theta] Length = 425 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 98/402 (24%), Positives = 174/402 (43%), Gaps = 24/402 (5%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 + +L LD + + + I+ + N S ++ L TLK + Sbjct: 32 IDQVLILDIIQKKKNNQFDKIKNEKKKI--------FNHNRSTLNQLI----TLKTKKTN 79 Query: 87 LEKEEHEVCSSLKKLIS-----CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + + K N +++N + + S H Sbjct: 80 YYEFLIQKLIRTFKFFLGFLSNFFTNFLHNSNFFFSNSNSSRVEFSRVNFSLNNKKKTNH 139 Query: 142 FEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 E+ + L ++D+ R K+SG R L G L AL Q+ +D + + + P + Sbjct: 140 VELLKNLRIVDYKRGVKVSGNRAYYLIGPGVSLNLALIQYGLDFMLKRN-FISIQTPFYM 198 Query: 202 RDEAMYGTGQIPKFADDMFCT--TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 ++ + Q+ F + ++ D ++LI TSE ++ + E I ++ LPL++ ++ Sbjct: 199 NEKILKCCVQLQDFIEQLYSMGKNDKKFLIATSEQTICAFHFKEKIHAEYLPLKYVGIST 258 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHY 317 FR E+GS G+DT G+ R HQF K E I + S+ E ++S ++E K L + + Sbjct: 259 CFRKESGSHGKDTNGIFRVHQFEKIEQFIICNSDKYESWKFFEILISNSKEFYKSLQIPF 318 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR-YRDPNSKSL 376 +++ T DL +A + DL W + Y+E+ SCS C +QS + Y++ Sbjct: 319 ICINIPTIDLNKTASRKTDLLGWFPSGSNYKELVSCSNCLEYQSENLYIETYKNGILPQK 378 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 + H LN + A R + I ENY +G +TIP LR Y+ Sbjct: 379 SYLHMLNSTLCATTRTICCIAENYSENNG-LTIPNALRDYLG 419 >gi|119576774|gb|EAW56370.1| seryl-tRNA synthetase, isoform CRA_f [Homo sapiens] Length = 421 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 112/208 (53%), Gaps = 7/208 (3%) Query: 223 TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 D ++LI TSE + L+ E + + LP+++ L+ FR E GS GRDTRG+ R HQF Sbjct: 170 YDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFE 229 Query: 283 KCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 K E + S+ E M++ AEE + L + Y +V++ +G L +A K DLE W Sbjct: 230 KIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAW 289 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILE 398 G +RE+ SCS C ++Q+RR+ RY ++F H LN + A R + AILE Sbjct: 290 FPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILE 349 Query: 399 NYLNADGSVTIPTVLRPYM--NNLAVIK 424 NY G +T+P L+ +M +I Sbjct: 350 NYQTEKG-ITVPEKLKEFMPPGLQELIP 376 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 55/154 (35%), Gaps = 36/154 (23%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILI-------KKIEDIRA 49 LD+ R +P + +KR +P + ++ D + R + + +++ Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRFLDSLFLGRFRADNLNK 62 Query: 50 RRNSNSAQIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLP 85 +N S IG+ + + + DAL N + S +K E + Sbjct: 63 LKNLCSKTIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAIL 122 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E ++ + + + I N+ VPI Sbjct: 123 KCDAERIKLEAERFENLREIGNLLHPSVPISNDE 156 >gi|237833043|ref|XP_002365819.1| seryl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|211963483|gb|EEA98678.1| seryl-tRNA synthetase, putative [Toxoplasma gondii ME49] Length = 288 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 82/227 (36%), Positives = 118/227 (51%), Gaps = 30/227 (13%) Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LIPT+EV L Y + I + LP+R T P FR E G+ GR RG+LRQ F K E Sbjct: 53 FLIPTAEVPLVGFYRQKRIPEEDLPIRLTAATPCFRLEDGTYGRWNRGLLRQQVFEKVES 112 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 V I E + EH R+ + +LK L + +R V LC+GD+ +A YDLE W+ Sbjct: 113 VVICTPEQAEEEHARLRKIGKTLLKELQIPFREVLLCSGDMSATAAICYDLEAWIPSLQG 172 Query: 347 YREISSCSTCGNFQSRRMNSRYRDPNS-----------------------KSLKFTHTLN 383 + E+SS S C ++Q+RR++ +++ +S +F TLN Sbjct: 173 FLEVSSISNCWDYQARRLSVKFQPSKGASRQQTVSSKNKEAGDAGQTSAKRSSRFCFTLN 232 Query: 384 GSGVAVGRCLIAILENYL--NADGS-----VTIPTVLRPYMNNLAVI 423 GS +AVGR L+A++EN+ D S V IP L+PY+ L I Sbjct: 233 GSTLAVGRTLVAVIENHQFIKEDHSGKKRGVRIPKPLQPYLGGLEEI 279 >gi|16648024|gb|AAL25277.1| GH04194p [Drosophila melanogaster] Length = 272 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 120/233 (51%), Gaps = 17/233 (7%) Query: 201 VRDEAMYGTGQIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESK 248 +R E M Q+ +F ++++ D ++LI TSE + + E + Sbjct: 1 MRKEVMQEVAQLSQFDEELYKVVGKGSEKAEEVGIDEKYLIATSEQPIAAYHRDEWLPES 60 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCA 306 SLP+++ L+ FR E GS GRDTRG+ R HQF K E +T S+ + M+ A Sbjct: 61 SLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIGNA 120 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 E+ + L + YRVV++ +G L +A K DLE W G YRE+ SCS C ++Q+RR+ Sbjct: 121 EQFCQSLGIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLV 180 Query: 367 RYRDPNSKS--LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 R+ + + + H LN + A R + AILE + G + +P L+ YM Sbjct: 181 RFGQTKKMNAAVDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKKYM 232 >gi|268552267|ref|XP_002634116.1| C. briggsae CBR-SRS-1 protein [Caenorhabditis briggsae] Length = 437 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 97/412 (23%), Positives = 169/412 (41%), Gaps = 49/412 (11%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 +N E + + R + + EK ++ + + G Sbjct: 52 KNIEAIKENILNRKGVGDIDKV---HEKWAVIQ------------------KMMNSGEKP 90 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 I E++ ++ + L IPN+ + VP G+ N + Sbjct: 91 N---------------DINEQKYAQLWNELYDEAILIPNMTQDGVPQGSEENAK-KVSEW 134 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 G K L+ E T+ SG R V G LA LE+AL + + Sbjct: 135 GDKREDDCLTAEKL----VQNWRSLLHPTEASGQRSYVFLGSLASLEKALLDYAYER-VC 189 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTNLYSHEI 244 G+ ++ P LV E G + + + T L T+E+ + Sbjct: 190 ALGFRPITVPDLVSGEVTQACGVMQRSEHPIQYTLAGDEAHTKLSGTAEMGIAAFLRGRT 249 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + + LP+R +L+ FR+E S + R H+F K E+ + E S E + ++ Sbjct: 250 FQEEQLPIRLVSLSRCFRTEI-SKSASEAKLYRVHEFSKVEMFVVCTPEQSLAELDYVVE 308 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRM 364 + + L +H R + + + +LG SA K +D+E W+ G+ LY E+SS S C +FQ+RR+ Sbjct: 309 VQKGTFQALGIHCRQLEMPSEELGASAAKKFDIEAWMPGRKLYGEVSSASNCTDFQARRL 368 Query: 365 NSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN-ADGSVTIPTVLRP 415 +Y+ + + K+ HT NG+ ++ R LI++LE + N G +P LR Sbjct: 369 GIKYKTADG-TTKYVHTCNGTALSSTRTLISVLETFQNDKKGLGELPDPLRK 419 >gi|330955758|gb|EGH56018.1| seryl-tRNA synthetase [Pseudomonas syringae Cit 7] Length = 115 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 70/114 (61%), Positives = 91/114 (79%) Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR 369 ++ L+L YR ++LCTGD+GFSA KTYDLEVW+ Q+ YREISSCS CG+FQ+RRM +R+R Sbjct: 1 MQLLELPYRTLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNCGDFQARRMQARWR 60 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 +P + + HTLNGSG+AVGR L+A+LENY ADGS+ +P VL+PYM L VI Sbjct: 61 NPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPYMGGLEVI 114 >gi|308445972|ref|XP_003087063.1| hypothetical protein CRE_19647 [Caenorhabditis remanei] gi|308263355|gb|EFP07308.1| hypothetical protein CRE_19647 [Caenorhabditis remanei] Length = 437 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 86/384 (22%), Positives = 153/384 (39%), Gaps = 21/384 (5%) Query: 44 IEDIRARRN--SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 E + +N + I G++ V ++ E + +K Sbjct: 45 FEFLLNEKNLEAIKENILHRKGVGDIDRVHEKWAVIQ------KMMNSGEKPSDINEQKY 98 Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPS---AIHLSREHFEIGEA--LGLMDFDRA 156 + E + I + + + E Sbjct: 99 AQLWNELYDEAILIPNMTKDGVPRGGEENAKKVAEWGEKREDDCLTAEKLVQTWRSLLHP 158 Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 T SG R V G LA LE+AL + G+ ++ P +V E G + + Sbjct: 159 TDASGQRSYVFLGALASLEKALLDY-AHERVCALGFRPITVPDIVSGEVTQACGVMQRSD 217 Query: 217 DDMFCT----TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + T L T+E+ + + + LP+R +L+ FR+E S Sbjct: 218 HPIQYTLGGDETHTKLSGTAEMGIAAFLRGRTFQEEQLPIRLVSLSRCFRTEI-SKSASE 276 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 + R H+F K E+ ++ E S E + ++ + + L +H R + + + +LG SA Sbjct: 277 AKLYRVHEFSKVEMFVVSTPEQSDAELDYLVEVQKGTFQALGVHCRQLEMPSEELGASAA 336 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 + +D+E W+ G+ LY E+SS S C +FQ+RR+ +Y+ + + K+ HT NG+ +A R Sbjct: 337 RKFDIEAWMPGRKLYGEVSSASNCTDFQARRLGIKYKSADG-TTKYAHTCNGTALASTRT 395 Query: 393 LIAILENYLNADGSV-TIPTVLRP 415 LI+ILE + N + +P LR Sbjct: 396 LISILETFQNDKKGIGELPEPLRK 419 >gi|320540749|ref|ZP_08040344.1| putative seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Serratia symbiotica str. Tucson] gi|320029188|gb|EFW11272.1| putative seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Serratia symbiotica str. Tucson] Length = 192 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 107/192 (55%), Positives = 127/192 (66%), Gaps = 8/192 (4%) Query: 202 RDEAMYGTGQIPKFADDMFCTT--------DGRWLIPTSEVSLTNLYSHEIIESKSLPLR 253 +YGTGQ+PKF +D+F T LIPT+EV LTNL EI+E SLPL+ Sbjct: 1 NHTTLYGTGQLPKFGEDLFHTQLLEEESDNSNYALIPTAEVPLTNLVRDEILEEGSLPLK 60 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 T P FR+EAGS GRDTRG++R HQF K E+V I R EDS E M AE++L+ L Sbjct: 61 MTAHTPCFRAEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEAMTGHAEKVLQLL 120 Query: 314 DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS 373 +L YR V LCTGD+GF ACKTYDLEVWL QN YREISSCS +FQ+RRM +RYR Sbjct: 121 NLPYRKVLLCTGDMGFGACKTYDLEVWLPAQNTYREISSCSNMWDFQARRMQARYRSKTE 180 Query: 374 KSLKFTHTLNGS 385 K + HTLNGS Sbjct: 181 KKPRLVHTLNGS 192 >gi|308491903|ref|XP_003108142.1| CRE-SARS-1 protein [Caenorhabditis remanei] gi|308248990|gb|EFO92942.1| CRE-SARS-1 protein [Caenorhabditis remanei] Length = 442 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 86/384 (22%), Positives = 153/384 (39%), Gaps = 21/384 (5%) Query: 44 IEDIRARRN--SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 E + +N + I G++ V ++ E + +K Sbjct: 50 FEFLLNEKNLEAIKENILHRKGVGDIDRVHEKWAVIQ------KMMNSGEKPSDINEQKY 103 Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPS---AIHLSREHFEIGEA--LGLMDFDRA 156 + E + I + + + E Sbjct: 104 AQLWNELYDEAILIPNMTKDGVPRGGEENAKKVAEWGEKREDDCLTAEKLVQTWRSLLHP 163 Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 T SG R V G LA LE+AL + G+ ++ P +V E G + + Sbjct: 164 TDASGQRSYVFLGALASLEKALLDY-AHERVCALGFRPITVPDIVSGEVTQACGVMQRSD 222 Query: 217 DDMFCT----TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + T L T+E+ + + + LP+R +L+ FR+E S Sbjct: 223 HPIQYTLGGDETHTKLSGTAEMGIAAFLRGRTFQEEQLPIRLVSLSRCFRTEI-SKSASE 281 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 + R H+F K E+ ++ E S E + ++ + + L +H R + + + +LG SA Sbjct: 282 AKLYRVHEFSKVEMFVVSTPEQSDAELDYLVEVQKGTFQALGVHCRQLEMPSEELGASAA 341 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 + +D+E W+ G+ LY E+SS S C +FQ+RR+ +Y+ + + K+ HT NG+ +A R Sbjct: 342 RKFDIEAWMPGRKLYGEVSSASNCTDFQARRLGIKYKSADG-TTKYAHTCNGTALASTRT 400 Query: 393 LIAILENYLNADGSV-TIPTVLRP 415 LI+ILE + N + +P LR Sbjct: 401 LISILETFQNDKKGIGELPEPLRK 424 >gi|324512186|gb|ADY45053.1| Seryl-tRNA synthetase [Ascaris suum] Length = 426 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 97/388 (25%), Positives = 163/388 (42%), Gaps = 14/388 (3%) Query: 44 IEDIRARRN--SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 + + RN I G++ V + + + E E ++ L + Sbjct: 34 FDYLLDERNLKKIRENIKSRKGIGDIDQVLKIWHRIEEYPRRNERDEHEYKQLWDKLYEE 93 Query: 102 ISCIPNVPLEEVPIGTSANEN-ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLS 160 IPN+ P G + + K+ S + E L + Sbjct: 94 ALLIPNMSHPNAPRGDESCARLVRTFGSAKRDSNGLFTAEKIAQSWRSVLY----PREAC 149 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G+R G LA LE AL ++ D+ + G+ V P +VR G + A + Sbjct: 150 GSRSYAFIGPLADLEYALLSYVSDV-VEKAGFRPVFVPDIVRRSVTEACGLQQRSAQAIQ 208 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 L TSE+ L++L + + LPLR T L+ +R E S + R Sbjct: 209 YHLVDHPQLCLSGTSEMGLSDLIRGRVFRAADLPLRLTALSRCYRPEV-SKTVWEARLYR 267 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 H+F K E+ + +E S + + ++ I L LH R++ + T +LG SA + +D+ Sbjct: 268 VHEFTKIEMFVVCKENQSDSVLDELVDVQCSIFDSLGLHCRLLDMPTEELGASAARKFDV 327 Query: 338 EVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 E W+ G++++ E+SS S C +FQ+RR++ +Y D K KF HT N + +A R +IA+L Sbjct: 328 EAWMPGRHVFGEVSSASNCTDFQARRLDVKYTDERGKR-KFAHTCNATALATSRAIIALL 386 Query: 398 ENYLNA-DGSVTIPTVLRPYMNNLAVIK 424 E Y G +P L+ + Sbjct: 387 ETYQTDRKGLRELPLELQKRLGKKRKAP 414 >gi|17542084|ref|NP_500549.1| Seryl tRNA Synthetase family member (srs-1) [Caenorhabditis elegans] gi|4239885|dbj|BAA74732.1| Seryl-tRNA synthetase [Caenorhabditis elegans] gi|14916374|gb|AAC24441.2| Seryl trna synthetase protein 1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 441 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 86/412 (20%), Positives = 156/412 (37%), Gaps = 47/412 (11%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 +N E + + R + + +K ++ + + G Sbjct: 54 KNLEAIRENILNRKGVGDIDKV---HKKWAVIQ------------------KMMKSGEKQ 92 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 A+ + K + + I + + Sbjct: 93 TNGAVSEQ------------KYKQLWDELYDEAILIPNMTQDGVPRGSEDQAKIVAEWGE 140 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 ++ + + L D SG R V G LA LE+AL + Sbjct: 141 KREDECLTAEKLVQTWRSLLHPTD------ASGQRSYVFLGALASLEKALLDY-AHERVC 193 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTNLYSHEI 244 G+ ++ P +V E G + + + T L T+E+ + Sbjct: 194 ALGFRPITVPDIVSGEVTQACGVMQRSDHPIQYTLAGEESHTKLSGTAEMGIAAFLRGRT 253 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 LP+R +L+ FR+E S + R H+F K E+ ++ E S E + ++ Sbjct: 254 FNQDQLPIRLVSLSRCFRTEI-SKSASEAKLYRVHEFSKVEMFVVSTPEQSAAELDYLVE 312 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRM 364 + + L +H R + + + +LG SA + +D+E W+ G+ LY E+SS S C +FQSRR+ Sbjct: 313 VQKGTFQALGVHCRQLEMPSEELGASAARKFDIEAWMPGRKLYGEVSSASNCTDFQSRRL 372 Query: 365 NSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN-ADGSVTIPTVLRP 415 +Y+ + + K+ HT NG+ +A R LI++LE + N G +P LR Sbjct: 373 GIKYKTADG-TTKYAHTCNGTALASTRALISVLETFQNDKKGLGELPEPLRK 423 >gi|170589291|ref|XP_001899407.1| seryl-tRNA synthetase, mitochondrial precursor [Brugia malayi] gi|158593620|gb|EDP32215.1| seryl-tRNA synthetase, mitochondrial precursor, putative [Brugia malayi] Length = 418 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 108/398 (27%), Positives = 182/398 (45%), Gaps = 31/398 (7%) Query: 17 ALKKRHLE--------PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 +LK+R + P+ ++ L++KN LIK E+IR R G++ Sbjct: 2 SLKRRLINSISNVLSRPELDFDFLLNDKNVDLIK--ENIRCR-----------KGVGDID 48 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 V +L + ++L E+E + + L + IPN+ V G+ +N + + Sbjct: 49 TVHSLWRQIQDYSKKLKQSEQEYQSLWNKLYEEAMLIPNLCHPSVAKGSFSNAHAVRFFG 108 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 K+ + E G R L G LA LE AL ++ + Sbjct: 109 EKRKDGNLETAETIAKAWKA----LYNPLNACGERSYALVGPLADLELALLDYVSSI-VE 163 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDM---FCTTDGRWLIPTSEVSLTNLYSHEII 245 + G++ V P +V + G G + D+ L TSE+ L++L S + Sbjct: 164 QKGFSPVVVPDIVHENVAEGCGIQQRSDKDILYRMRNYSNFCLSGTSEMGLSSLVSGRVF 223 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 LP++ L+ FR E + +++ + R H+F K E+ I E DS M+ Sbjct: 224 GHNELPVKLKALSRCFRPEIATNAAESK-LYRVHEFNKIEMFVICNENDSDLLLSEMVEI 282 Query: 306 AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMN 365 I L LH+R++ + + +LG SA + +D+E W+ G+ ++ E+SS S C ++Q+RR++ Sbjct: 283 QTSIFSSLGLHFRLLDMPSEELGASAARKFDIEAWMPGRKIFGEVSSASNCTDYQARRLS 342 Query: 366 SRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 +YRD + KF HT N + VA R LIA+LE Y N Sbjct: 343 IKYRDSSG-VEKFAHTCNATAVATARTLIALLETYQNE 379 >gi|296085799|emb|CBI31123.3| unnamed protein product [Vitis vinifera] Length = 168 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 58/152 (38%), Positives = 84/152 (55%), Gaps = 11/152 (7%) Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + I + EDS + HE ++ E++ L LH++ + + +GDLG A + YD+E W+ G Sbjct: 1 MFIICQPEDSNSYHEELIGIEEDLFSSLGLHFKTLDMASGDLGAPAYRKYDVEAWMPGLG 60 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNS-----------KSLKFTHTLNGSGVAVGRCLI 394 Y EISS S C ++QSRR+ RYR S +F HTLN + AV R ++ Sbjct: 61 RYGEISSASNCTDYQSRRLGIRYRPSESLSMNPKRGMNLAPTQFVHTLNATACAVPRMIV 120 Query: 395 AILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 +LENY DG+V IP LRP+M L I + Sbjct: 121 CLLENYQQEDGNVIIPEPLRPFMGGLERITPK 152 >gi|167390181|ref|XP_001739240.1| seryl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760] gi|165897139|gb|EDR24389.1| seryl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar SAW760] Length = 189 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 69/171 (40%), Positives = 98/171 (57%), Gaps = 2/171 (1%) Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 + +FR EAG+ G+DT G+ R HQF K E +T + S+ HE M+ A + + L Sbjct: 1 MGFSTNFRKEAGAHGKDTWGIFRVHQFEKIEQFCMTLPDKSWEMHEEMIKNARDFFESLK 60 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR-DPNS 373 + YRVV++ +G L +A K YDLE + G N YRE+ SCS C ++QSR + R + D Sbjct: 61 IPYRVVNIVSGALNNAAAKKYDLEGYFPGFNEYRELVSCSNCTDYQSRELEVRLQTDKKD 120 Query: 374 KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 K+ + H LN + A R L ILENY DG + +P VLRPY+ + I Sbjct: 121 KTKSYVHMLNSTLCATERALCCILENYQCEDG-IIVPEVLRPYVGGVEKIP 170 >gi|41615098|ref|NP_963596.1| seryl-tRNA synthetase [Nanoarchaeum equitans Kin4-M] gi|40068822|gb|AAR39157.1| NEQ308 [Nanoarchaeum equitans Kin4-M] Length = 484 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 103/480 (21%), Positives = 188/480 (39%), Gaps = 86/480 (17%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D++++R+ PE LKKR ++ + L+ D R L K+++++R N+ S I Sbjct: 1 MIDVEFLRKYPEKYKEMLKKRFMDTSIVDEFLAYDNLWRSLKKELDNLRCLHNAISKAIA 60 Query: 60 QAI---------------------AEGNLSLVDALKNETSTLKEQ--------------- 83 A+ ++ L+ + ++ + Sbjct: 61 TGKLEHNCNTKIELKDDKEYLITLAKSLKKEIEILEKQLKEIESKRNDILWRMPNYIRED 120 Query: 84 --LPILEKEEHEVCSSLKKLISCIP-------------NVPLEEVPIGTSANENILIRSV 128 + E+ + + + + + ++ Sbjct: 121 VPIGEDERYNKPLKYWGVAKVLDVEKFKQETQRKPINILELDPRYIKDSLTYKELIDFLR 180 Query: 129 GKKPSAIHLSRE-----------------------HFEIGEALGLMDFDRATKLSGARFS 165 P E H+++ + L + D + +K++G+RF Sbjct: 181 STNPEYFVNPDEAIDFDLLNKEGLVLYIKIDKAKHHYDLTKELNIADQELGSKIAGSRFY 240 Query: 166 VLTGHLAHLERALGQFMIDLHTSE----HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 V +E L +F+++ S + Y + P LVR F D ++ Sbjct: 241 VEFEKGLFMELKLIKFVLETLKSRTEGKYNYKIMKLPYLVRGWVEKAAAYFTAFEDTLYK 300 Query: 222 TT-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 + +L PT+E + LY LPL +FR EAGS G+DT+G+ R HQ Sbjct: 301 IEGEDLYLNPTAEHPIAGLYKDYYFNDNELPLIVYGFTTAFRKEAGSHGKDTKGIFRVHQ 360 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 F K E + T +E + ++S AE I+K+L L YR+V +GD+ +DLEV+ Sbjct: 361 FEKIEQYAFTTKEQLLEIYNFLVSNAETIVKKLGLPYRIVFNSSGDMDKKVTMQWDLEVY 420 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 Q YRE+ S T +Q+RR+N +Y S + +T+ + + + R + A+LEN Sbjct: 421 YPAQEKYRELHSFGTVEEWQARRLNIKY------SKGYVNTIYATALPIQRAMTALLENN 474 >gi|229027864|ref|ZP_04184021.1| Seryl-tRNA synthetase [Bacillus cereus AH1271] gi|228733440|gb|EEL84265.1| Seryl-tRNA synthetase [Bacillus cereus AH1271] Length = 116 Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 65/116 (56%), Positives = 82/116 (70%) Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 +L+ L+L YRV+S+CTGDLGF+A K YD+EVW+ YREISSCS FQ+RR N R+ Sbjct: 1 MLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREISSCSNFEAFQARRANIRF 60 Query: 369 RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 R + + HTLNGSG+A+GR + AILENY DG++ IP VLRPYM VIK Sbjct: 61 RREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPEVLRPYMGGKTVIK 116 >gi|169836238|ref|ZP_02869426.1| seryl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 112 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 69/112 (61%), Positives = 85/112 (75%) Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 ++L YRVV+LC+GDLGFSA KTYDLEVW+ QN YREISSCS +FQ+RR +YR+ Sbjct: 1 MELPYRVVALCSGDLGFSAAKTYDLEVWVPSQNKYREISSCSNTEDFQARRAMIKYREKE 60 Query: 373 SKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 +K F HTLNGSG+AVGR L+AI+ENY DG++ IP VL PYM + VIK Sbjct: 61 TKKSHFVHTLNGSGLAVGRTLLAIMENYQQEDGTIKIPEVLVPYMGGMTVIK 112 >gi|221488281|gb|EEE26495.1| seryl-tRNA synthetase, putative [Toxoplasma gondii GT1] Length = 276 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 134/261 (51%), Gaps = 29/261 (11%) Query: 170 HLAHLERALGQFMIDLHT-----SEHGYTEVSAPLL-VRDEAMYGTGQIPKFADDMFCTT 223 +A L RAL + +D +TEV P L V + GTGQ+P+ + +F Sbjct: 1 MVARLHRALKNYFLDFLLALDTEDGKKFTEVGVPPLIVSRSTLEGTGQLPRLENGLFIAG 60 Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 + +LIPT+EV L Y + I + LP+R T P FR E G+ GR RG+LRQ F K Sbjct: 61 ENAFLIPTAEVPLVGFYRQKRIPEEDLPIRLTAATPCFRLEDGTYGRWNRGLLRQQVFEK 120 Query: 284 CELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAG 343 E V I E + EH R+ + +LK L + +R V LC+GD+ +A YDLE W+ Sbjct: 121 VESVVICTPEQAEEEHARLRKIGKTLLKELQIPFREVLLCSGDMSATAAICYDLEAWIPS 180 Query: 344 QNLYREISSCSTCGNFQSRRMNSRYRDPNS-----------------------KSLKFTH 380 + E+SS S C ++Q+RR++ +++ +S +F Sbjct: 181 LQGFLEVSSISNCWDYQARRLSVKFQPSKGASRQQTVSSKNKEAGDAGQTSAKRSSRFCF 240 Query: 381 TLNGSGVAVGRCLIAILENYL 401 TLNGS +AVGR L+A++EN+ Sbjct: 241 TLNGSTLAVGRTLVAVIENHQ 261 >gi|226289107|gb|EEH44619.1| seryl-tRNA synthetase synthetase [Paracoccidioides brasiliensis Pb18] Length = 487 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 103/467 (22%), Positives = 176/467 (37%), Gaps = 78/467 (16%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IR N R+ ++ I L ++R L + + + + + I Sbjct: 54 DIKHIRGNAALYSQNCIDRNYSDLAQYPYKIQRLSAESRELQDALREPQRQIKQIESSIA 113 Query: 60 QAI------------AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + + + +L+ TLK++ L +++L +PN Sbjct: 114 KLMVSSRNPDIEGPQKRMTEEELSSLRLSAQTLKDKSNHLTTARTNHTKEIERLALSLPN 173 Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE---ALGLMDFDRATKLSGARF 164 + + P G + I PS L H +L L++F A+ SG + Sbjct: 174 LTSPQTPPGPEPSLINYINYDPISPSTTPLPTHHTSHVTIGTSLNLLNFTSASLTSGWGW 233 Query: 165 SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD 224 LT A LE+AL Q+ + + G+ +S P LV + G P+ A++ Sbjct: 234 YYLTNEAALLEQALIQYSLSVAL-RRGWQAISPPSLVYSHIAHACGFQPRDANN------ 286 Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 E + ++ E + P R T P G+ + + Sbjct: 287 --------EQQVYHIEQSERDVERGRPGRCTATTPVKGGSGSGIGKGSVTVSSL------ 332 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 +L EIL L+L RV+ + T DLG SA + D+EV + Sbjct: 333 --------------FYEILDLQTEILTALNLPCRVLEMPTQDLGASAFRKRDIEVLFPSR 378 Query: 345 ------------------------NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH 380 + + E++S S C ++Q+RR+ +R + N KF H Sbjct: 379 MVSHSTSANANAHANAKDTTIDIESGWGEVTSASICTDYQTRRLGTRMKAANGGGSKFPH 438 Query: 381 TLNGSGVAVGRCLIAILENYLNA-DGSVTIPTVLRPYMNNLAVIKKE 426 T+NG+ +AV R + A+LE+ + G V +P VLR +M VI E Sbjct: 439 TVNGTAMAVPRIIAALLEHGWDERRGVVVLPEVLRGWMGGRRVIGGE 485 >gi|328711565|ref|XP_003244573.1| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like, partial [Acyrthosiphon pisum] Length = 232 Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 109/198 (55%), Gaps = 5/198 (2%) Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 D ++LI TSE + L+ + + S P+R+ ++ FR E GS GRDTRG+ R HQF K Sbjct: 1 DDKYLIATSEQPIAALHRDQWLPEASFPIRYLGVSTCFRQEVGSHGRDTRGIFRVHQFEK 60 Query: 284 CELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 E +T S+ + M++ + + L + YRVV++ +G L +A K DLE W Sbjct: 61 VEQFVLTSPFDNQSWILFDEMINNSRQFYDDLGIAYRVVNIVSGALNHAAAKKLDLEAWF 120 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPN--SKSLKFTHTLNGSGVAVGRCLIAILEN 399 G +RE+ SCS C ++QSRR+ RY ++ + + H LN + A R + AILE Sbjct: 121 PGSGAFRELVSCSNCLDYQSRRLLVRYGQTKKMNEKVDYVHMLNATACATTRVICAILET 180 Query: 400 YLNADGSVTIPTVLRPYM 417 Y G + +P +L+ Y+ Sbjct: 181 YQTETG-IKVPEILKKYL 197 >gi|22090616|dbj|BAC06854.1| Ser-tRNA synthetase homologue [Bacillus circulans] Length = 284 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 110/282 (39%), Positives = 174/282 (61%), Gaps = 5/282 (1%) Query: 18 LKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 +K R + + I LD K R L++++E ++ RRN+ S ++ A+ + D L Sbjct: 1 MKNRGGKQLEEVTRIAELDVKRRELLQEVEQLKNRRNTVSQEV--AMRKKAKEDADDLIA 58 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 E + +++ L++E + L L+ IPNVP E VP+G S +NI IR G P Sbjct: 59 EMKGVGDRIKELDEELRTLEVELNHLLLSIPNVPHESVPVGASEEDNIEIRRNGNVPEFG 118 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 ++ H+++ LG++DF+ A K++G+RF G A LERAL FM+DLH++EHGY E+ Sbjct: 119 FEAKAHWDLATDLGILDFEAAGKVTGSRFVFYKGLGARLERALMNFMMDLHSTEHGYEEM 178 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNLYSHEIIESKSLPLRF 254 P +V +++ GTGQ+PKF +D+F + + IPT+EV +TN + +I+ ++ LP +F Sbjct: 179 LPPYIVNRDSLTGTGQLPKFEEDVFHIENSEYFLIPTAEVPVTNYHRDDILAAEQLPRKF 238 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + FRSEAG+AGRDTRG++RQHQF K ELV + + E+S+ Sbjct: 239 VAFSACFRSEAGAAGRDTRGLIRQHQFNKVELVKLVKPEESY 280 >gi|193678861|ref|XP_001944269.1| PREDICTED: seryl-tRNA synthetase, mitochondrial-like [Acyrthosiphon pisum] Length = 384 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 94/363 (25%), Positives = 156/363 (42%), Gaps = 16/363 (4%) Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + + L S+ + L K + SL+ I + Sbjct: 6 QKMCSKKVDLNKQFMKCYSSWRNNLSTTLKTFKKTMPSLEDKFKDISKKTHP--RVEHIQ 63 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +++SVG+KP + + + + + G R G LA +E AL Sbjct: 64 GDFEVVKSVGQKPVFKFKPLPLSMLNKVKYCLKTENLSNYCGDRSYYFIGPLAKIEHALV 123 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL------IPTSE 233 Q+ + + G+ VS P ++ DE + G + T D + TSE Sbjct: 124 QYTL-AKLIKKGFKLVSVPDILPDELIERCGMDTAGERNQVYTFDNNYYGKKWCLSGTSE 182 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++L ++ + LPL+ +++ +R+E S + +G+ R HQF K E+ E Sbjct: 183 MALAGSLMNKNVSKDKLPLKLCSVSRCYRAEVSSIA-EEKGIFRVHQFTKVEMFGACLPE 241 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 +S E++L+ +LHYRV+ + +LG A + YD+E W+ G N Y EISSC Sbjct: 242 ESENMALYFRDIQEDLLQPFNLHYRVLDMAKHELGTQAYRKYDIEAWMPGCNKYGEISSC 301 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVL 413 S C N+QS R+ HT+NG+ AV R +IA+ E + DGS+ +P L Sbjct: 302 SDCTNYQSERLGI------HSDGIILHTVNGTACAVPRLIIALAETHQTIDGSLILPEKL 355 Query: 414 RPY 416 Y Sbjct: 356 NDY 358 >gi|330955780|gb|EGH56040.1| seryl-tRNA synthetase [Pseudomonas syringae Cit 7] Length = 101 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 64/100 (64%), Positives = 80/100 (80%) Query: 324 TGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLN 383 TGD+GFSA KTYDLEVW+ Q+ YREISSCS CG+FQ+RRM +R+R+P + + HTLN Sbjct: 1 TGDMGFSAVKTYDLEVWIPSQDKYREISSCSNCGDFQARRMQARWRNPETGKPELVHTLN 60 Query: 384 GSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 GSG+AVGR L+A+LENY ADGS+ +P VL+PYM L VI Sbjct: 61 GSGLAVGRTLVAVLENYQQADGSIRVPEVLKPYMGGLEVI 100 >gi|319411862|emb|CBQ73905.1| related to mitochondrial seryl-tRNA synthetases [Sporisorium reilianum] Length = 826 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 99/427 (23%), Positives = 175/427 (40%), Gaps = 74/427 (17%) Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT----- 117 + + LK +KE+L + K++ E+ + + PN +VP+G Sbjct: 202 RKDGEEHIKQLKESARKIKEELDKVHKQQEEIRARSHNIRMSWPNHCHPDVPVGPEENAV 261 Query: 118 -----------SANENILIRSVGKKPSAIHLSREHFEIGEALG-----------LMDFDR 155 +++ + + + +D Sbjct: 262 VLSVKDPLDILPKEFDVMKEPWNESVMQAKHFPDGPKPDPKRDHLSLAGSAASAEVDMVS 321 Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 +G+ + L G ++ LE AL Q+ + + +G+ VS P +VR + G P+ Sbjct: 322 GLLSTGSSWPYLLGSISLLEHALSQYAMSIAV-RNGFLPVSPPDVVRADLADRCGFRPRD 380 Query: 216 A-----------------DDMFCTTDGRWLIPTSEVSLTNL------------------- 239 + + L T+E+ L L Sbjct: 381 EKARQTYFIEGTKSKSAEQESSQSAAELCLAATAEIPLAGLLAARTLDNSKKARKRASSH 440 Query: 240 -YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR--EEDSF 296 + +I+ LP++ L +FR+EAG+ G DTRG+ R HQF K E+ T + S Sbjct: 441 DHESSLIQRSELPIKLAALGHAFRAEAGARGADTRGLYRVHQFSKIEMFVATDGNMKASN 500 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 E + EE++ L L YRV+ + T +LG SA + YD+EVW+ G+ + E+SS S C Sbjct: 501 AMLEELRGVQEEVIGGLGLPYRVLDMPTEELGASAYRKYDIEVWMPGRGSWGEVSSASNC 560 Query: 357 GNFQSRRMNSRYRD-----PNSKSLKF--THTLNGSGVAVGRCLIAILENYLNADGSVTI 409 +Q+ R+ + ++ N L++ HTLN + A+ R ++AILEN+ G + + Sbjct: 561 TAYQALRLGIKLKNASAPSKNDDDLRYATAHTLNATAAAIPRLIVAILENHGVEKGKLVL 620 Query: 410 PTVLRPY 416 P L+P+ Sbjct: 621 PDTLKPF 627 >gi|88770706|gb|ABD51956.1| serine tRNA ligase [Rhodomonas salina] Length = 210 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 4/195 (2%) Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LI TSE ++ +++E I LPL+++ + FR E+GS G+D+ G+ R HQF K E Sbjct: 10 YLIATSEQPISAFHTNEKITRNKLPLKYSGFSTCFRKESGSHGKDSAGIFRVHQFEKIEQ 69 Query: 287 VSITREE--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 +T + +S+ E +L +E L + Y V + +G + SA + DL W Sbjct: 70 FILTDSKGTESWALFEELLGNTQEFYSSLKIPYICVDIPSGAINNSASRKIDLLGWFPSS 129 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSK-SLKFTHTLNGSGVAVGRCLIAILENYLNA 403 Y+E+ SCS C +FQS+RMN + K + KF H LN + A R + ILEN Sbjct: 130 GSYKELVSCSNCTDFQSKRMNIELFPASEKFNGKFVHMLNSTLCATTRVICCILENNQTN 189 Query: 404 DGSVTIPTVLRPYMN 418 G + IP V+R Y+ Sbjct: 190 LG-IKIPDVIRSYVG 203 >gi|289741247|gb|ADD19371.1| seryl-tRNA synthetase [Glossina morsitans morsitans] Length = 420 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 98/411 (23%), Positives = 194/411 (47%), Gaps = 24/411 (5%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R + + D I + + +A +N I E N+ + + Sbjct: 22 RKIFANVRPLTEFDS---NAIGEHDLQQAEKN-----ILLRRRENNIPNIRNILKRLKLN 73 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 K +++ LK + +PN + + + L+ E Sbjct: 74 KTSSVDIDE--------LKNELLKLPNDTHPRLWTYENRPKETLLCD---PSKIDTNYVE 122 Query: 141 HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 ++ + ++ ++ +G + L G LA LE+AL ++ + + + + ++ P + Sbjct: 123 FSQVCKFNNMLRMNQLGNYTGQKSYYLFGKLAELEQALIRYALSV-LKQKQFRLLAVPDI 181 Query: 201 VRDEAMYGTGQIPK-FADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 + + G G + ++ G L TSE+SL +S++++E +LP++ ++ Sbjct: 182 LPKHIIEGCGMATDGDRNQVYKLDSGDCLSGTSEMSLAGYFSNKLLEENNLPIKVAAVSR 241 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRV 319 +R+E S ++ +G+ R HQF K E+ SI E +S + EI K L+LH R+ Sbjct: 242 CYRAE-TSGLQEEKGIYRVHQFTKVEMFSICSELESHEMLQHFKDIEIEIFKSLNLHLRL 300 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFT 379 + + +LG SA + YDLE W+ G+ ++ EISSCS C ++Q++R+N +Y ++ K+ Sbjct: 301 LDMPPTELGASAYEKYDLEAWMPGRQMWGEISSCSNCTDYQAKRLNIQYITNEGQN-KWV 359 Query: 380 HTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHILE 430 +T+NG+ A+ R LIA+LE+ ++ +P VL+ Y++ + K++ I E Sbjct: 360 NTINGTATAIPRLLIALLESNQ-KGKNLLVPNVLKDYLHTSILTKEKSIPE 409 >gi|71018837|ref|XP_759649.1| hypothetical protein UM03502.1 [Ustilago maydis 521] gi|46099407|gb|EAK84640.1| hypothetical protein UM03502.1 [Ustilago maydis 521] Length = 707 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 104/422 (24%), Positives = 172/422 (40%), Gaps = 73/422 (17%) Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE----- 121 V +LK +K++L + K++ E+ + + + PN EVP+G N Sbjct: 89 EDKVKSLKERAKKVKQELDGVLKQQEEIRARSQNIRLSWPNHCHPEVPVGPEENAVLLSV 148 Query: 122 ----NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK------------------L 159 N+L + + S + D R Sbjct: 149 EDPLNVLPSEFDEMKEPWNKSVMQAKHFPDGPKPDPKRDHLSLAASACAAEVDMMSGLLA 208 Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD- 218 +G+ + L G ++ LE AL Q+ + + G+ VS P +VR + G P+ Sbjct: 209 TGSSWPYLLGSISLLEHALSQYAMSI-VVRKGFIPVSPPDVVRADLADRCGFRPRDEKAK 267 Query: 219 ----------------MFCTTDGRWLIPTSEVSLTNLYSHEIIESK-------------- 248 + L T+E+ L L + I+ Sbjct: 268 QTYFLETAKGKGTEKGQSHSDADLCLAATAEIPLAGLLAARTIDETRKDKRASTSEEGSC 327 Query: 249 -----SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT--REEDSFTEHER 301 LP++ L +FR+EAG+ G DTRG+ R HQF K E+ T E S E Sbjct: 328 LIQESKLPIKLAALGHAFRAEAGARGADTRGLYRVHQFSKIEMFVATEGHVEASNAMLEE 387 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 + + EE++ L L YRV+ + T +LG SA + YD+EVW+ G+ + E+SS S C ++Q+ Sbjct: 388 LRAIQEEVIGGLGLPYRVLDMPTEELGASAYRKYDIEVWMPGRGSWGEVSSASNCTSYQA 447 Query: 362 RRMNSRYRD-----PNSKSLKF--THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLR 414 R+ + + + HTLN + A+ R ++AILEN+ G + +P L Sbjct: 448 LRLGIKLKTAEPVSQENGDPHHPTVHTLNATAAAIPRLIVAILENHGVERGKLVLPDTLA 507 Query: 415 PY 416 P+ Sbjct: 508 PF 509 >gi|328479296|gb|EGF48652.1| seryl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462] Length = 125 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 71/126 (56%), Positives = 91/126 (72%), Gaps = 1/126 (0%) Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 M+ AE++L++L L Y V++L + D F++ KT DLEVWL Q+ YREISSCS C +FQ+ Sbjct: 1 MIHDAEDLLRKLGLPYHVITLASNDASFTSAKTNDLEVWLPAQDRYREISSCSNCTDFQA 60 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLA 421 RR RYRD + K L+F HTLNGSG+AVGR + AILENY ADG+V IP VL PYM+ Sbjct: 61 RRAQIRYRDDDGK-LQFVHTLNGSGLAVGRTVAAILENYQQADGTVKIPDVLVPYMHGQT 119 Query: 422 VIKKEH 427 IK+E Sbjct: 120 AIKQED 125 >gi|331238974|ref|XP_003332141.1| seryl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309311131|gb|EFP87722.1| seryl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 594 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 132/548 (24%), Positives = 212/548 (38%), Gaps = 126/548 (22%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILS---LDEKNRILIKKIEDIRARRNSNSAQI 58 +D I N L R + I L + + L KK+ + + R+NS +I Sbjct: 40 IDYNRITSNRNACAKNLVDRKSHLTPDAIEDVAYLYSEYKNLSKKLVEAKQRQNSLGNKI 99 Query: 59 GQAIAE----------------------------------------GNLSLVDALKN--- 75 +AI GNL L +K+ Sbjct: 100 KEAIGSLTPATKENSQNRAKDEEELLLSTTPLPSKKSNDSLHQSLGGNLELAAKVKDYHS 159 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 E +TLK+ + L K+ + L L + +PN VPIG I+ S G SA Sbjct: 160 EAATLKDAISNLSKDGVTLEQRLLDLATQLPNEIHPSVPIGAYEQSEIVSLSSGCTLSAD 219 Query: 136 HLSR--------------EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 L +H ++ LG + F K +G F L G+ A LE AL Q+ Sbjct: 220 PLPFNSFELPSRPPDPNRDHLKVMTELGWLSFSDGQKTTGPSFPFLVGNGAFLELALTQY 279 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------------------ 223 I L G+ P +VR E G P+ + T Sbjct: 280 AISLAVRS-GWNLTLGPDIVRTELSDRCGFSPRDGGESNHTYFVSTHKTNQTDSEEGDRS 338 Query: 224 ------DGRWLIPTSEVSLTNLYSHEIIESKSLPL------RFTTLAPSFRSEAGSAGRD 271 L T+E+ L + + +K+ P + +L ++R+EAGS G + Sbjct: 339 LEHLSTPNLCLAATAEIPLVGSFHSSTLPNKTYPTFPLNPIQLVSLGTAYRAEAGSRGSE 398 Query: 272 TRGMLRQHQFWKCELVSITREE--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 +RG+ R HQF K E+++IT + S ++ML +I+ L+L YRV+ + + +LG Sbjct: 399 SRGLYRIHQFKKVEMMAITGSDLTTSEKMLQKMLELQIQIVSSLNLPYRVLEMSSQELGA 458 Query: 330 SACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR-------------------- 369 SA YD+E W+ G+ + E+SS S C ++QSRR+ R + Sbjct: 459 SAYHKYDIETWMPGRGRWGEVSSASNCTDYQSRRLGIRSKARQPCPDPCTGPEDSAEGGR 518 Query: 370 -------DPNSKSLKFTHTLNGSGVAVGRCLIAILENY----LNADGS-VTIPTVLRP-Y 416 S F HTLN + A+ R +++++EN N + V +P L+ + Sbjct: 519 ESKPVTGRKASDKPAFVHTLNATAAAMPRLIVSLIENGVILDQNNRVTAVKLPAPLKNFW 578 Query: 417 MNNLAVIK 424 + I+ Sbjct: 579 LGEATNIE 586 >gi|316966046|gb|EFV50681.1| serine--tRNA ligase [Trichinella spiralis] Length = 443 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 108/420 (25%), Positives = 186/420 (44%), Gaps = 39/420 (9%) Query: 18 LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNET 77 + R E + +L+ + L E+IR R Q+G ++ + L N Sbjct: 18 IAARRPELDFDRLLNPE----NLASIRENIRCR-----KQVG------DIDQLHRLWNNM 62 Query: 78 STL--KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 T+ + + E + + IPN E P+G + I+ + G KP Sbjct: 63 QTVIQDKNPTMTMNELTSMWDRFYEEALLIPNDTHPEAPVGDESVAKIIHTN-GSKPIFT 121 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 +I ++ + G + L LA LE AL +F D GY EV Sbjct: 122 FKPLFGEDIAVKFKIL-WQDVGFCCGEKAYFLYNQLAILELALIRFCRDR-LRSSGYEEV 179 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSLTNLYSHEIIESKSLPL 252 P ++ + G + + ++ + L T+E+ L + + I + +P Sbjct: 180 VVPDVIPKRIVENCGLMNRTDKEIVYSIHGLPNWTLSGTAEMGLASFIENRIFDVNEMPK 239 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE---DSFTEHERMLSCAEEI 309 +F +++ FR E + G+ ++G+ R H+F K E+ T E +S H +L + + Sbjct: 240 KFFSVSRCFRPEVAT-GKLSKGLYRVHEFTKVEMFICTANETGLESNISHLEILEMQKLL 298 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR 369 L+LH+ V+ + T +LG SA + +D+E W G++ Y EISS S C ++QSRR+ ++Y+ Sbjct: 299 FSELNLHFNVLEMPTEELGASAFRKFDIESWFPGRDCYGEISSASNCTDYQSRRLLTKYK 358 Query: 370 DPNSKSLKFTHT-----------LNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 + LKF HT +NG+ A+ R LIA+LE + + V IP L Y+N Sbjct: 359 SSDGN-LKFVHTVNKSIKLAKQNVNGTACALSRTLIAMLEQFQCKNRQVNIPKFLLDYVN 417 >gi|328872434|gb|EGG20801.1| hypothetical protein DFA_00666 [Dictyostelium fasciculatum] Length = 1534 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 67/177 (37%), Positives = 97/177 (54%), Gaps = 1/177 (0%) Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E S E + + + FRSE G G + RG+ R HQF K E+ + E Sbjct: 88 ETSTKMKDKKLTREERDQLVEQVGFSHCFRSEVGG-GTNNRGIYRVHQFSKVEMFVLANE 146 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 +DS H +L E+ L+L +RV+ + TGDLG A + +D+EVW+ +N Y EISS Sbjct: 147 QDSDRIHRELLDTQIEMFNELELPFRVLDMPTGDLGAPAYRKFDIEVWIPSRNGYGEISS 206 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTI 409 S C ++QSRR+N ++ F HTLNG+ +A+ R ++AILEN DGS+ I Sbjct: 207 TSNCTDYQSRRLNIKHHLHADADSHFVHTLNGTAIAIPRIILAILENNQQKDGSMII 263 >gi|159487781|ref|XP_001701901.1| seryl tRNA synthetase [Chlamydomonas reinhardtii] gi|158281120|gb|EDP06876.1| seryl tRNA synthetase [Chlamydomonas reinhardtii] Length = 120 Score = 193 bits (489), Expect = 7e-47, Method: Composition-based stats. Identities = 52/117 (44%), Positives = 74/117 (63%), Gaps = 3/117 (2%) Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 + L LH++V+ + +GDLG A + YD+E W+ G Y EISS S C ++QSRR+N RY Sbjct: 2 MFTELGLHFKVLDMPSGDLGAPAFRKYDVEAWMPGLQRYGEISSASNCTDYQSRRLNIRY 61 Query: 369 RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 + +F HTLN + AV R ++AILEN+ DGSV +P LRPY+ + VI+ Sbjct: 62 ---SGGKTEFVHTLNATACAVPRMIVAILENFQQEDGSVVVPLPLRPYLGGMEVIRP 115 >gi|76664981|emb|CAJ17932.1| seryl-tRNA synthetase [Candidatus Phytoplasma solani] Length = 149 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 77/150 (51%), Positives = 101/150 (67%), Gaps = 1/150 (0%) Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + RQHQF K EL+ +DS+ ++ML A+ +L L L YRVV L TGDLGFS KT Sbjct: 1 IFRQHQFNKVELIQFCNPKDSYFFLDQMLHDAQAVLDLLKLPYRVVVLSTGDLGFSMAKT 60 Query: 335 YDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLI 394 YDLEV+L N YREI S S NFQ+RR N ++ +P +K ++ H LNGSG+A+GR +I Sbjct: 61 YDLEVFLPSSNSYREIGSISNSENFQARRANIKFLNPENKKKEYLHILNGSGLAIGRTMI 120 Query: 395 AILENYLNADGSVTIPTVLRPYMNNLAVIK 424 AILENY N DG++ +P VL PY+ +IK Sbjct: 121 AILENYQNQDGTIHVPEVLIPYL-GTDIIK 149 >gi|309365646|emb|CAP22951.2| CBR-SARS-2 protein [Caenorhabditis briggsae AF16] Length = 468 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 97/443 (21%), Positives = 169/443 (38%), Gaps = 80/443 (18%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 +N E + + R + + EK ++ + + G Sbjct: 52 KNIEAIKENILNRKGVGDIDKV---HEKWAVIQ------------------KMMNSGEKP 90 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 I E++ ++ + L IPN+ + VP G+ N + Sbjct: 91 N---------------DINEQKYAQLWNELYDEAILIPNMTQDGVPQGSEENAK-KVSEW 134 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 G K L+ E T+ SG R V G LA LE+AL + + Sbjct: 135 GDKREDDCLTAEKL----VQNWRSLLHPTEASGQRSYVFLGSLASLEKALLDYAYER-VC 189 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTNLYSHEI 244 G+ ++ P LV E G + + + T L T+E+ + Sbjct: 190 ALGFRPITVPDLVSGEVTQACGVMQRSEHPIQYTLAGDEAHTKLSGTAEMGIAAFLRGRT 249 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + + LP+R +L+ FR+E S + R H+F K E+ + E S E + ++ Sbjct: 250 FQEEQLPIRLVSLSRCFRTEI-SKSASEAKLYRVHEFSKVEMFVVCTPEQSLAELDYVVE 308 Query: 305 CAEEILKRLDLHY---------------RVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + L +H R + + + +LG SA K +D+E W+ G+ LY E Sbjct: 309 VQKGTFQALGIHCRYQKPFHCHLELCIFRQLEMPSEELGASAAKKFDIEAWMPGRKLYGE 368 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN------- 402 +SS S C +FQ+RR+ +Y+ + + K+ HT NG+ ++ R LI++LE + N Sbjct: 369 VSSASNCTDFQARRLGIKYKTADG-TTKYVHTCNGTALSSTRTLISVLETFQNVSVSMIT 427 Query: 403 ----------ADGSVTIPTVLRP 415 G +P LR Sbjct: 428 SDRCNSLLQDKKGLGELPDPLRK 450 >gi|213422859|ref|ZP_03355895.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 104 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 64/103 (62%), Positives = 77/103 (74%) Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH 380 LCTGD+GF ACKTYDLEVW+ QN YREISSCS +FQ+RRM +R R + K + H Sbjct: 1 MLCTGDMGFGACKTYDLEVWVPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVH 60 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 TLNGSG+AVGR L+A++ENY ADG + +P VLRPYMN L I Sbjct: 61 TLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYI 103 >gi|84999662|ref|XP_954552.1| seryl-trna synthetase [Theileria annulata] gi|65305550|emb|CAI73875.1| seryl-trna synthetase, putative [Theileria annulata] Length = 584 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 124/428 (28%), Positives = 196/428 (45%), Gaps = 45/428 (10%) Query: 11 PEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IGQAIAEGN 66 PE R + + I +L + + +I + ++ +S I + Sbjct: 179 PELFHNNFLLRGEDHWSELIQIRTLFRRKTEIFDQISQLTTEKSDSSKSFFITNCVNSLL 238 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 ++ +N+ LK +L LE+E LK L +PN+ EV + + + Sbjct: 239 RTVNIGARNKLKELKIELNSLEQE-------LKSLRIKLPNLLSLEVTDNNTVLKPVKRS 291 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 + ++ RA +SG FS + L+ L RAL + +D Sbjct: 292 GNTLIKNKLN------------------RAVSISGKGFSSYSAPLSTLSRALVNYFLDTL 333 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-------WLIPTSEVSLTNL 239 T YTEV PL+V + TG +P F ++++ +LIPT+EVSL L Sbjct: 334 TRLFNYTEVVVPLIVSKSTLELTGHLPYFEENLYKLEADSSFNGEVGYLIPTAEVSLLGL 393 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + + +LP FT + FR E G +TRG++RQHQF K EL+ + E S H Sbjct: 394 FKGSRFRANNLPKFFTAYSECFRKEIQDYGANTRGLIRQHQFGKVELLCFSSPESSEYTH 453 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 MLS E +L +L++ YR V L D G ++ KT D EV L N++ E+SSCS +F Sbjct: 454 SLMLSHIEFLLNQLEIPYRQVLLSAKDTGHTSSKTIDFEVPLPSNNIFLELSSCSNTKDF 513 Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN--ADGSV--TIPTVLRP 415 Q+ +N + S H++NGSG+ +GR + A+LE +G + IP L+P Sbjct: 514 QTNPLNI-----TTDSFNRLHSINGSGLPIGRTITALLEYNSTKRENGLIQFKIPKALQP 568 Query: 416 YMNNLAVI 423 Y+NN +I Sbjct: 569 YLNNSTLI 576 >gi|256081519|ref|XP_002577017.1| seryl-tRNA synthetase [Schistosoma mansoni] gi|238662309|emb|CAZ33254.1| seryl-tRNA synthetase [Schistosoma mansoni] Length = 465 Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 97/440 (22%), Positives = 165/440 (37%), Gaps = 64/440 (14%) Query: 2 LDI----QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 LD+ ++I ++L L R +++L L RN Sbjct: 47 LDLFNDGKFI----DNLRENLTARKSNLNLDHMLDLY----------------RN----- 81 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + D L + L P + S K I EE Sbjct: 82 ---YTKTKHTETHDELMSLVCQL----PNFTHPLTPIGDSSKARHIYIHGSKREERWKLL 134 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 P H + + G + T +G + +G LA LE A Sbjct: 135 DVINITSGSHH---PVINHHNTDSSITINPEGYLRVKYTTLGAGHKTYYFSGPLAQLESA 191 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------RWLIPT 231 L + +D G+ VS P ++ + + G + L T Sbjct: 192 LIAYTMDR-LRGTGFEFVSVPDILPEPVIRACGFPTQGIRSQIYKITPPVSKLTYCLSGT 250 Query: 232 SEVSLTNLYSHEII-------ESKSLPLR-----FTTLAPSFRSEAGSAGRDTRGMLRQH 279 SE++L + + + ++ FR EA + + R H Sbjct: 251 SEMALAGFCAGRSFNCTSSKNDEPDESNQSSALGLCAVSRCFRKEAPN---QEPTLYRVH 307 Query: 280 QFWKCELVSITREE--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 QF K E+ +IT S +++ + L LH+RV+ + + +LG SA + D+ Sbjct: 308 QFTKVEMFAITTPSLPVSDAMFNQIIKLQICLFADLGLHFRVLEMPSEELGDSAYRKVDI 367 Query: 338 EVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 E W+ G +Y EISS S C ++QS+R+N R++ ++++ +F +TLNG+ A+ R + A++ Sbjct: 368 EAWMPGDQIYGEISSSSICLDYQSKRLNIRWQTSSNQN-EFAYTLNGTACAIPRIMKALI 426 Query: 398 ENYLNADGSVTIPTVLRPYM 417 E + D + IP VL PYM Sbjct: 427 ETHQTQDKHIIIPDVLIPYM 446 >gi|42571443|ref|NP_973812.1| SRS (SERYL-TRNA SYNTHETASE); serine-tRNA ligase [Arabidopsis thaliana] gi|332190685|gb|AEE28806.1| Seryl-tRNA synthetase [Arabidopsis thaliana] Length = 402 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 93/325 (28%), Positives = 166/325 (51%), Gaps = 7/325 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N E ++I ++ R+ E +L L E L K++E +R RN+ + + Sbjct: 79 IDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEVERLREERNNVAK---KM 135 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S + L E LKE L LE++ ++ L+ + IPN+ +VP+G + Sbjct: 136 KGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHPDVPVGGEDSS 195 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + VG ++H ++G+ L L+DFD A ++SG++F L LE AL + Sbjct: 196 -AIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLLEMALLNW 254 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--GRWLIPTSEVSLTNL 239 + + GYT ++ P +VR + G P+ + + D + LI T+E+ + + Sbjct: 255 TLS-QVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTDQCLIGTAEIPVGGI 313 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + I+ +LPL++ + FR+EAG+AG T+G+ R HQF K E+ I + EDS + H Sbjct: 314 HMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQPEDSESFH 373 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCT 324 + ++ E++ L LH+ + Sbjct: 374 QELIQIEEDLFTSLGLHFNRFRRSS 398 >gi|167465743|ref|ZP_02330832.1| seryl-tRNA synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 168 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 72/163 (44%), Positives = 98/163 (60%), Gaps = 3/163 (1%) Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHYRVVS 321 E G+AG+D RG+ R HQF K E V R + S + + + + AEE+L+ L+L YRVV+ Sbjct: 2 EVGAAGKDVRGLYRVHQFAKVEQVVFCRNDRDESESVLQEITANAEELLQMLELPYRVVA 61 Query: 322 LCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHT 381 +CTGD+ K YD+E W+ + Y E S S +FQSRR N RYRD L++ HT Sbjct: 62 VCTGDMSQKTYKQYDIETWMPSRGDYGETHSSSNLHDFQSRRSNIRYRDERGN-LEYCHT 120 Query: 382 LNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 LN + VA R LI +LEN+ DGSV +P LRPYM ++ Sbjct: 121 LNNTAVASPRILIPLLENHQREDGSVYLPPALRPYMGGRKELR 163 >gi|161899419|ref|XP_001712936.1| seryl-tRNA synthetase [Bigelowiella natans] gi|75756430|gb|ABA27324.1| seryl-tRNA synthetase [Bigelowiella natans] Length = 408 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 8/313 (2%) Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 +N + K H EI L ++D + K +G R L G L Sbjct: 94 PFKCDNKNSLIIKKFKRQPFYRYSHVEIMRKLDIVDLNNGLKAAGNRGYFLKGFGLDLNL 153 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSE 233 AL +F ++ + ++ APL +R + M QI F + ++ + +LI T+E Sbjct: 154 ALVKFGLEY-LETQQHVKLWAPLFLRKQIMKKCVQILDFKNQLYKIPIAKNTFYLIATAE 212 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 ++ + + + LPL+ + FR EAGS G D+ G+ R HQF K E I+ Sbjct: 213 QAICSQMYNNTYKISDLPLKLCCYSTCFRKEAGSHGIDSGGLFRVHQFEKIEQFIISYSR 272 Query: 294 D--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E + +L +E+ +++ L Y++V + + +L + YD+E W G YRE+ Sbjct: 273 YFLKNKEFQLLLERSEKFYQQIRLPYQIVEMNSSELNSFSFIKYDIEAWFPGSKTYREVV 332 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SC+ C N QS + S+ + NS T N + A R + A++EN+ +G V IP Sbjct: 333 SCTNCLNMQSNSLKSKIKTQNSFDCDMC-TFNSTLAATERLMCALVENFQVKEG-VKIPH 390 Query: 412 VLRPYMNNLAVIK 424 LR Y NN +K Sbjct: 391 CLRKYCNNKKFLK 403 >gi|313616615|gb|EFR89429.1| seryl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 103 Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats. Identities = 55/99 (55%), Positives = 69/99 (69%) Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS 385 DLGF+A K YDLEVW+ + YREISSCS +FQ+RR N R+R ++ HTLNGS Sbjct: 2 DLGFTAAKKYDLEVWIPSYDSYREISSCSNFESFQARRANIRFRREPGSKPEYVHTLNGS 61 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 G+A+GR + AILENY ADGSV IP VL+ YM + I+ Sbjct: 62 GLALGRTVAAILENYQEADGSVRIPKVLQGYMGGIEKIE 100 >gi|291228809|ref|XP_002734369.1| PREDICTED: seryl-tRNA synthetase 2-like [Saccoglossus kowalevskii] Length = 570 Score = 186 bits (471), Expect = 9e-45, Method: Composition-based stats. Identities = 91/474 (19%), Positives = 176/474 (37%), Gaps = 58/474 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +DI I N + ++ +K R+ + + SL + + ++ + ++ + + + Sbjct: 95 IDISGIMNNIDLMERNVKARNTLIDFKALASLWKDMQQHKVAVDQLEIQKKKVNQLVKKV 154 Query: 62 IAEGN-LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + + +K+E+ L+ +L ++ V L ++ +PN P G + Sbjct: 155 KQENSTSDEIQQMKDESKRLRNELKKIKSLYSNVSEELYNIVLKLPNFTHSNTPSGMTEL 214 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + G + + H +G+ L ++ F+ + L A LE+ L Sbjct: 215 ---ITHRFGDQLKLQPWIKNHVVLGKVLDVLSFEHSH--VQPGVCYLKKEAALLEQGLLF 269 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTG---QIPKFADDMFCTTDGRWLIPTSEVSLT 237 +M D E+ + P + + + G G + P + + D L S +SL Sbjct: 270 WMSD-KLKENNCLHLCCPEMFKPIIVEGCGLELEDPSQVYSVIASDDVLHLAGVSIMSLA 328 Query: 238 NLYSHEIIESKSLPLRFTTL----------APSF----RSEAGSAGRDTRGMLRQHQFWK 283 Y + E SLP R+ F + + + Q Sbjct: 329 ANYMMAVFEYDSLPHRYGVHFLVIEIDSVDILCFTFGRNYDPSKESKTFSSLCSMQQSSM 388 Query: 284 CELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 +L IT ++S + L +++ +L++H R V++ G L + +++WL Sbjct: 389 VQLCGITHNSFDESNHLMDEYLLFLQDLYSQLNIHMRTVNVPIGQLDPCMYRKSAIQMWL 448 Query: 342 AGQNL--------------------------YREISSCSTCGNFQSRRMNSRYRDPNS-- 373 QN Y+E++S C +F SRR+ RY S Sbjct: 449 PSQNTXXXXXXXXXXXXXXXXXQMWLPSQNTYQEVASVYNCTDFISRRLKFRYPCNPSES 508 Query: 374 ----KSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 + + HT+ G+ + V + +LEN DGSV P+ L PY I Sbjct: 509 AVISRKRHYCHTVFGTAMCVPSVIAILLENCQQKDGSVVFPSALWPYTFGCQGI 562 >gi|328863783|gb|EGG12882.1| hypothetical protein MELLADRAFT_24990 [Melampsora larici-populina 98AG31] Length = 377 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 98/377 (25%), Positives = 164/377 (43%), Gaps = 52/377 (13%) Query: 75 NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI----------- 123 E S LK + L K+ + L+ L IPN +VPIG+ + + Sbjct: 1 QEASLLKSSISTLTKDLKLLNQRLQTLGISIPNQTHPDVPIGSYSKSKVIKTFEGSNWNQ 60 Query: 124 -LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFM 182 +P R+H +I L + + +G+ F L G LE AL Q+ Sbjct: 61 IKYDYQSFEPIEKDKHRDHLKIMNQLEWISLKSGSNSTGSNFVFLFGSGGCLELALVQYA 120 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------------------- 223 + G+ V P LV+ + + G P+ + T Sbjct: 121 LS-MIIGKGWKLVLGPDLVKTQVLKLCGFEPRDLGETHQTYYVSNQLSSFQSTKTAESTE 179 Query: 224 ------DGRWLIPTSEVSLTNLYSHEII------ESKSLPLRFTTLAPSFRSEAGSAGRD 271 L TSE+ + + + + + P+R+ ++ +FRSEAG+ G + Sbjct: 180 EEERRVPELCLSATSEIPMISSFHSTTLPNSTHPDFPHQPIRWVSVGNAFRSEAGARGLE 239 Query: 272 TRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 ++G+ R HQF K ELV + E S M+ I++ L L YRV+ + + +LG Sbjct: 240 SKGLYRLHQFKKIELVCLMENDLEKSEGMLWEMIGLQCRIIEGLGLPYRVLEMSSEELGN 299 Query: 330 SACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD------PNSKSLKFTHTLN 383 SA YD+E W+ + + EI+S S C ++QSRR+N +Y+ K +F HTLN Sbjct: 300 SAFHKYDIETWMPSKGKWGEITSASNCTDYQSRRLNIKYKSSSSNLMEKKKETEFLHTLN 359 Query: 384 GSGVAVGRCLIAILENY 400 +G+A+ R +++++EN Sbjct: 360 ATGLAIPRIMMSLIENG 376 >gi|225560361|gb|EEH08643.1| seryl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 505 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 100/459 (21%), Positives = 161/459 (35%), Gaps = 81/459 (17%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IR+N R+ S I L + R L + + + + + I Sbjct: 63 DIKHIRENASLYSENCIARNYHDLSRYPYEIQRLSTECRELQDTLREPQRKIKQIESAIA 122 Query: 60 QAIAE-----------------GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 Q +A + AL+ LK++ L +++L Sbjct: 123 QLMANSSDPHNADPRVQQNQETKAKEELSALRLSAQHLKDKSHHLTTTRASHTKEIERLA 182 Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSA-IHLSREHFEIGEALGLMDFDRATKLSG 161 +PN+ E P G I KP+ + H IG L L++F A+ SG Sbjct: 183 LSLPNLTSTETPPGAEPRIVNYINYDPDKPANLPTHTTSHVTIGTTLNLLNFTSASLTSG 242 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 + LT A LE+AL QF + + G+ VS P LV + G P+ A + Sbjct: 243 WGWYYLTNEAALLEQALIQFALSVAI-RRGWQAVSPPSLVYSHIAHACGFQPRDAHNEQQ 301 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 +R Sbjct: 302 IYHIEQSGVIWVAMPDPAGCWCWWNR-------------YR-----HFPPPNTGWDG--- 340 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 +S R A+ IL L+L RV+ + DLG SA + D+EV Sbjct: 341 ------------NSDNPLRRNPRAADRILTALNLPCRVLEMPAHDLGASAARKRDIEVLF 388 Query: 342 AGQ------------------------NLYREISSCSTCGNFQSRRMNSRYR-DPNSKSL 376 + + + E++S S C ++Q+RR+ +R + D + Sbjct: 389 PSRMASPSPHDGLSTSNATIAKDISVESGWGEVTSASNCTDYQTRRLGTRLKSDMAGGAG 448 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLR 414 KF HT+NG+ +AV R + A+LE+ + + G V +P VLR Sbjct: 449 KFPHTVNGTAMAVPRIIAALLEHGWDENRGVVVLPDVLR 487 >gi|149200692|ref|ZP_01877683.1| seryl-tRNA synthetase [Lentisphaera araneosa HTCC2155] gi|149136219|gb|EDM24681.1| seryl-tRNA synthetase [Lentisphaera araneosa HTCC2155] Length = 260 Score = 183 bits (464), Expect = 6e-44, Method: Composition-based stats. Identities = 98/261 (37%), Positives = 158/261 (60%), Gaps = 4/261 (1%) Query: 43 KIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 K+E+++++RN+ S QIG G + +L +Q+ L+ + E+ S + + Sbjct: 2 KVEELKSQRNTASKQIGIMKKNG--EDASSAMEAVRSLGDQIKELDAKAAELSSQVNAKL 59 Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGA 162 +PN P E P+G + +N +R G KP + H+++G+ L ++D RA K+SG+ Sbjct: 60 LSLPNPPSEFTPVGLTEEDNPEVRRWGTKPEFDFAPQAHWDLGQNLDILDLPRAAKISGS 119 Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 F + G A LERAL F +D +T E+GY E P +V +AM GTGQ+PKFA++++ Sbjct: 120 GFYLWKGAGARLERALINFFLDQNT-ENGYKEAWVPFVVNPKAMTGTGQLPKFAEEIYHA 178 Query: 223 T-DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 D +L+PT+EV +TN+++ EI+++K LP+ +T P FR EAG+AG+D+RG+LR HQF Sbjct: 179 PEDNLYLVPTAEVPVTNIHADEILDAKELPIAYTAYTPCFRREAGAAGKDSRGILRVHQF 238 Query: 282 WKCELVSITREEDSFTEHERM 302 K E+V S+TE E + Sbjct: 239 SKVEMVKFVEPSTSYTELEML 259 >gi|123220017|emb|CAM22591.1| seryl-aminoacyl-tRNA synthetase [Mus musculus] Length = 352 Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats. Identities = 87/376 (23%), Positives = 149/376 (39%), Gaps = 45/376 (11%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 IG+ + + D E L + + + I + + E + Sbjct: 63 TIGEKMKKKEAVGDDESVPE-----NVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKC 117 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + +L I G L LE+ Sbjct: 118 DGERVKLEAERFENLREIGNLLHPSVPISNDE--------------------GPLVFLEQ 157 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------TD 224 AL Q+ + GYT + P +R E M Q+ +F ++++ D Sbjct: 158 ALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYD 216 Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 ++LI TSE + L+ E + + LP+++ L+ FR E GS GRDTRG+ R HQF K Sbjct: 217 EKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKI 276 Query: 285 ELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 E + S+ + M++ AEE + L + Y +V++ +G L +A K DLE W Sbjct: 277 EQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFP 336 Query: 343 GQNLYREISSCSTCGN 358 G +RE+ SCS C + Sbjct: 337 GSGAFRELVSCSNCTD 352 >gi|213026917|ref|ZP_03341364.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 268 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 120/267 (44%), Positives = 162/267 (60%), Gaps = 8/267 (2%) Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 L+ E + L E+L + E + + ++ + IPN+P +EVP+G N+N+ + G Sbjct: 2 LRLEVNKLGEELDAAKAELDTLLAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPR 61 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 R+H +GE +DF A KL+G+RF V+ G +A + RAL QFM+DLHT +HGY Sbjct: 62 EFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGY 121 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTSEVSLTNLYSHEI 244 +E P LV + +YGTGQ+PKFA D+F T LIPT+EV LTNL EI Sbjct: 122 SENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEVPLTNLVRDEI 181 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 I+ LP++ T P FRSEAGS GRDTRG++R HQF K E+V I R EDS E M Sbjct: 182 IDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTG 241 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSA 331 AE++L+ L L YR + LCTGD+GF A Sbjct: 242 HAEKVLQLLGLPYRKIILCTGDMGFGA 268 >gi|289760001|ref|ZP_06519379.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis T85] gi|289715565|gb|EFD79577.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis T85] Length = 329 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 9/308 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +D++ +R+NP+ + + R +P + +L+ D R +I + +RA + + S +G Sbjct: 11 IDLKLLRENPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAASKSVGG 70 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E L L EQ+ E +E E ++ I NV ++ VP G + Sbjct: 71 ASPEERP----PLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGEDD 126 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +L V +PS + ++H E+GE+LGL+D R K+SG+RF LTG A L+ L Q Sbjct: 127 YAVLD--VVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQ 184 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-RWLIPTSEVSLTNL 239 + L ++G+ P+LVR E M GTG + A++++ +L+ TSEV L Sbjct: 185 LALKLAV-DNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDGLYLVGTSEVPLAGY 243 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 +S EI++ PLR+ + FR EAGS G+DTRG++R HQF K E D+ EH Sbjct: 244 HSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEH 303 Query: 300 ERMLSCAE 307 ER+L Sbjct: 304 ERLLGWQR 311 >gi|297578711|ref|ZP_06940639.1| seryl-tRNA synthetase [Vibrio cholerae RC385] gi|297536305|gb|EFH75138.1| seryl-tRNA synthetase [Vibrio cholerae RC385] Length = 248 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 11/248 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I +L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +A+K + TL + L + E V + L + +PN+P + VP G + Sbjct: 61 LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN+ + G + ++H ++GE +DF ATK++GARF V+ G A L RA+ Q Sbjct: 121 ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLI 229 FM+DLHT +HGYTE+ P LV E ++GTGQ+PKF D+F T LI Sbjct: 181 FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI 240 Query: 230 PTSEVSLT 237 PT+EV +T Sbjct: 241 PTAEVPVT 248 >gi|255580582|ref|XP_002531115.1| seryl-tRNA synthetase, putative [Ricinus communis] gi|223529311|gb|EEF31280.1| seryl-tRNA synthetase, putative [Ricinus communis] Length = 119 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 12/117 (10%) Query: 322 LCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN--------S 373 + + DL A + +D+E W+ G Y EISS S C ++QSRR+ RYR + Sbjct: 1 MASADLWAPAFRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPSDLTLKNPKKG 60 Query: 374 K----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 K KF HTLN + AV R LI +LENY DGSV IP LRP+M L +I + Sbjct: 61 KSSLAPTKFVHTLNATAFAVPRMLICLLENYQQEDGSVVIPEPLRPFMGGLELIAPK 117 >gi|237732621|ref|ZP_04563102.1| seryl-tRNA synthetase [Mollicutes bacterium D7] gi|229384300|gb|EEO34391.1| seryl-tRNA synthetase [Coprobacillus sp. D7] Length = 309 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 84/286 (29%), Positives = 139/286 (48%), Gaps = 5/286 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+DI +R+NP + +KK+ + + + LD+ R ++ K ++R++RN S + Sbjct: 22 MIDIAILRENPTLVKENMKKKFQDDKIGLVDEAYKLDKDYREVLTKASELRSKRNKLSKE 81 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 IGQ + EGN + K + S + ++L LE E + S LK ++ IPN E VP+G Sbjct: 82 IGQFMREGNKDAAENNKKQVSAMADELAKLEDLETQYGSELKAIMMKIPNFIDESVPLGK 141 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +EN+ I G+ H EI E +D D A +++G F L G +A L A Sbjct: 142 DDSENVEITKYGEPVVPDFEIPYHTEIMENFDGIDMDAAGRVAGQGFYYLMGDIARLHSA 201 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSL 236 + + D + G+T V P ++R + G + M+ + +LI TSE S+ Sbjct: 202 ILSYARDFMI-DRGFTYVIPPYMIRSNVVTGVMSFEEMDSMMYKIEGEDLYLIGTSEHSM 260 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 + I+E LP +T+ +P FR E G+ G + RG+ R Sbjct: 261 IGKFIDNILEEDKLPYTYTSYSPCFRKEKGAHGIEERGVYRIQTLS 306 >gi|154276390|ref|XP_001539040.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150414113|gb|EDN09478.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 466 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 100/462 (21%), Positives = 170/462 (36%), Gaps = 87/462 (18%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IR+N R+ S I SL ++R L + + + + + I Sbjct: 35 DIKHIRENAPLYSENCIARNYHDLSRYPYEIQSLSTESRELQDALREPQRKIKQIESAIA 94 Query: 60 QAIAE-----------------GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 Q +A + AL+ LK++ L +++L Sbjct: 95 QLMANSSDPHNADPRDQQNQETKTKEELSALRLSAQHLKDKSHHLTTTRASHTKEIERLA 154 Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSA-IHLSREHFEIGEALGLMDFDRATKLSG 161 +PN+ E P G I KP+ + H IG L L++F A+ SG Sbjct: 155 LSLPNLTSTETPPGAEPRIVNYINYDPDKPANLPTHTTSHITIGRTLNLLNFTSASLASG 214 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 + LT A LE+AL Q+ +++ G+ VS P LV + G P+ A + Sbjct: 215 WGWYYLTNEAALLEQALIQYALNVAI-RRGWQAVSPPSLVYSHITHACGFQPRDAHNEQQ 273 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + + + + T F Sbjct: 274 IYHIEQ-SGVIWGGRCRIPAGAGAGAGAGAGAVITATTLF-------------------- 312 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 + +L+ EIL L+L RV+ + DLG SA + D+EV Sbjct: 313 ------------------DEILALQTEILTALNLPCRVLEMPAHDLGASAARKRDIEVLF 354 Query: 342 AGQ------------------------NLYREISSCSTCGNFQSRRMNSRYR-DPNSKSL 376 + + + E++S S C ++Q+RR+ +R + D + Sbjct: 355 PSRMASPSPHEGLNTSNATIAKDISVESGWGEVTSASNCTDYQTRRLGTRLKSDMAGGAG 414 Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPTVLRPYM 417 KF HT+NG+ +AV R + A+LE+ + + G V +P VL+ +M Sbjct: 415 KFPHTVNGTAMAVPRIIAALLEHGWDENRGVVVLPDVLKGWM 456 >gi|145631510|ref|ZP_01787278.1| seryl-tRNA synthetase [Haemophilus influenzae R3021] gi|144982855|gb|EDJ90372.1| seryl-tRNA synthetase [Haemophilus influenzae R3021] Length = 267 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 93/259 (35%), Positives = 141/259 (54%), Gaps = 8/259 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNTRSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G ++ L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIEPLLAEVDNMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV +YGTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALQGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLR 253 +TNL II+ LP++ Sbjct: 239 PVTNLVRDVIIDEAELPIK 257 >gi|135172|sp|P26636|SYSC_CRIGR RecName: Full=Seryl-tRNA synthetase, cytoplasmic; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|553843|gb|AAA37019.1| transfer RNA-Ser synthetase [Cricetulus griseus] Length = 199 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 7/163 (4%) Query: 268 AGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 GRDTRG+ R HQF K E T S+ E M+ AEE + L + Y +V++ +G Sbjct: 2 HGRDTRGIFRVHQFEKIEQFVYTSPHDNKSWEMFEEMIGTAEEFYQSLGIPYHIVNIVSG 61 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFTHTLN 383 L +A K DLE W G +RE+ SCS C ++Q+RR+ RY ++F H LN Sbjct: 62 SLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLN 121 Query: 384 GSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 + A R + AILENY G + +P LR +M +I Sbjct: 122 ATMCATTRTICAILENYQTEKG-IIVPEKLREFMPPGLQELIP 163 >gi|242040317|ref|XP_002467553.1| hypothetical protein SORBIDRAFT_01g030086 [Sorghum bicolor] gi|241921407|gb|EER94551.1| hypothetical protein SORBIDRAFT_01g030086 [Sorghum bicolor] Length = 219 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 75/218 (34%), Positives = 112/218 (51%), Gaps = 6/218 (2%) Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 ++G R L L AL F + + G+ + P +R E M Q+ +F ++ Sbjct: 3 VAGGRGYFLKDEGVLLNLALINFGLTF-LRKRGFKPMQTPFFMRKETMRKCAQLVQFDEE 61 Query: 219 MFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 ++ T + ++LI TSE + + + I LP+R+ + FR EAGS GRDT G+ Sbjct: 62 LYKVTGDGEEKYLIATSEQPMCAYHLGDRIHPDELPIRYAGYSTCFRKEAGSHGRDTAGI 121 Query: 276 LRQHQFWKCELVSITREE--DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 R HQF K E IT DS+ E M+ +E+ K + L Y+VVS+ +G L +A K Sbjct: 122 FRVHQFEKIEQFCITNPNGNDSWEMLEEMIKNSEDFYKEIGLPYQVVSIVSGALNDAASK 181 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDP 371 YDLE W N YRE+ SCS C ++Q+RR+ Y Sbjct: 182 KYDLEAWFPASNTYRELVSCSNCTDYQARRLGITYGQK 219 >gi|194705730|gb|ACF86949.1| unknown [Zea mays] Length = 153 Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 3/135 (2%) Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 HE ML +E+ K + L Y+VVS+ +G L +A K YDLE W +RE+ SCS C Sbjct: 1 MHEEMLKNSEDYYKEIGLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTFRELVSCSNCT 60 Query: 358 NFQSRRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 +FQSRR+ Y + + +S +F H LN + A R L ILEN+ DG V +P L+P Sbjct: 61 DFQSRRLGIGYGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKEDG-VEVPKALQP 119 Query: 416 YMNNLAVIKKEHILE 430 YM + + + L+ Sbjct: 120 YMGGIEFLPFKQPLD 134 >gi|330860582|emb|CBX70881.1| seryl-tRNA synthetase [Yersinia enterocolitica W22703] Length = 259 Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 91/250 (36%), Positives = 136/250 (54%), Gaps = 10/250 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + E + +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNMLRNELDAVAEKLARRGFKLDVEMLRQQEERRKVLQVETESLQAERNSRSKLIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E ++ + ++ L IPN+P + VP+G N Sbjct: 61 AKARG--EDIEPLRLEVNELGEKLDAAKAELDKLQNEIRDLALSIPNLPDDSVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G+ R+H +GE G +DF A KL+GARF V+ G +A + RAL Q Sbjct: 119 DNLEVSRWGEPRQYDFEVRDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALAQ 178 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTS 232 FM+DLHT +HGY E P LV +YGTGQ+PKF D+F T LIPT+ Sbjct: 179 FMLDLHTEKHGYLETYVPYLVNHATLYGTGQLPKFGGDLFHTKPLEEESDSSNYALIPTA 238 Query: 233 EVSLTNLYSH 242 EV +TNL Sbjct: 239 EVPVTNLVCR 248 >gi|23008663|ref|ZP_00050016.1| COG0172: Seryl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 235 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 110/230 (47%), Positives = 145/230 (63%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M DI+ IR+NPE D L++R L P S +++LD+ + + + + RRN+ S +IG Sbjct: 1 MHDIRAIRENPEAFDRDLERRGLAPLSAELIALDDARKGAVSAAQAAQERRNALSKEIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A + + L E + LKE+ P LE + E L + ++ IPN P EEVP G + Sbjct: 61 AKKAKDEARATELMAEVARLKEEAPALEAAQTEAARILDERLAAIPNRPKEEVPPGADEH 120 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 N+ R + R+HFE+GEA+GLMDF+ A KLSG+RF VL G LA LERALGQ Sbjct: 121 GNVEYRRFDASRERLAQGRQHFELGEAIGLMDFEAAAKLSGSRFVVLKGQLARLERALGQ 180 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 FM+DLHT+EHGYTEV P+LVRDEAM+GT Q+PKF DD F DG WL P Sbjct: 181 FMLDLHTTEHGYTEVVPPVLVRDEAMFGTAQLPKFRDDQFAAGDGFWLFP 230 >gi|145629000|ref|ZP_01784799.1| seryl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|144978503|gb|EDJ88226.1| seryl-tRNA synthetase [Haemophilus influenzae 22.1-21] Length = 267 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 139/259 (53%), Gaps = 8/259 (3%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHVTLGEEANGLDFAAGAKLTGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----TDGRWLIPTSEV 234 QFM+DLHT +HGY E P LV + GTGQ+PKF +D+F T LIPT+EV Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLCGTGQLPKFGEDLFHTLALEGEQPYALIPTAEV 238 Query: 235 SLTNLYSHEIIESKSLPLR 253 +TNL II+ LP++ Sbjct: 239 PVTNLVRDVIIDEAELPIK 257 >gi|294852238|ref|ZP_06792911.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] gi|294820827|gb|EFG37826.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] Length = 87 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 56/85 (65%), Positives = 65/85 (76%) Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + GQN YREISSCSTCG+FQ RRMN+RYR KS +F HTLNGSGVAVGR LIA++ENY Sbjct: 1 MPGQNTYREISSCSTCGDFQGRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENY 60 Query: 401 LNADGSVTIPTVLRPYMNNLAVIKK 425 DGS+ IP L+PYM L I+K Sbjct: 61 QQEDGSIHIPEALQPYMGGLTRIEK 85 >gi|33322953|gb|AAQ07213.1|AF496521_1 seryl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis] Length = 99 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 1/96 (1%) Query: 331 ACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVG 390 + KTYDLEVW+ Q+ YREIS CS C +FQ+RR RYRD + K +K THTLNGSG+AVG Sbjct: 1 SAKTYDLEVWMPAQDTYREISCCSNCTDFQARRAQIRYRDEDGK-VKLTHTLNGSGLAVG 59 Query: 391 RCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKE 426 R + ILENY N DG+VT+P LRPYM+ + I E Sbjct: 60 RTVAXILENYQNEDGTVTVPEALRPYMHGMTKITPE 95 >gi|301596288|ref|ZP_07241296.1| seryl-tRNA synthetase [Acinetobacter baumannii AB059] Length = 89 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 1/89 (1%) Query: 335 YDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLI 394 YDLEVW+ QN YREISSCS G+FQ+RRM +RYR + K + HTLNGSG+AVGR L+ Sbjct: 1 YDLEVWVPSQNTYREISSCSNMGDFQARRMKARYR-MDQKKTELVHTLNGSGLAVGRTLL 59 Query: 395 AILENYLNADGSVTIPTVLRPYMNNLAVI 423 A++ENY DGS+ IP VLRPYM I Sbjct: 60 AVMENYQREDGSIEIPEVLRPYMGGATFI 88 >gi|296419076|ref|XP_002839147.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635149|emb|CAZ83338.1| unnamed protein product [Tuber melanosporum] Length = 219 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 10/219 (4%) Query: 206 MYGTGQIPKFADDMFCTT------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAP 259 M T + +F D+++ + ++LI TSE ++ L++ E ++ K LP+R+ + + Sbjct: 1 MAKTSHLEQFDDELYRVISYGEEKNDKYLIATSEQPISGLHADEWLQQKGLPIRYASFSS 60 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRV 319 + EAG+ G+D G+ R HQF K E IT E S+ + +++ +EE K L++ YR Sbjct: 61 CYSREAGAHGKDAWGIFRVHQFEKLEQFVITHPEKSWEAFDEIINYSEEFYKSLNIPYRD 120 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD--PNSKSLK 377 V++ +G L +A K YD+E W + ++E+ S N+Q R RYR + + Sbjct: 121 VAIVSGALNNAAAKIYDVEAWFPFKGEHKELKS-PITTNYQPRNPEMRYRTNSQSDTVKE 179 Query: 378 FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + H LN + L +LENY + + +P LR Y Sbjct: 180 YVHCLNSTLCVTQCSLCCLLENYQTTE-CINVPEPLRKY 217 >gi|118490844|ref|XP_001238731.1| seryl-trna synthetase, (serine--trna ligase) (serrs) [Eimeria tenella] gi|109238514|emb|CAK51478.1| seryl-trna synthetase, (serine--trna ligase) (serrs) [Eimeria tenella] Length = 204 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 107/188 (56%), Gaps = 23/188 (12%) Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 + +E G+ G + RG+ RQ F+K E+ ++ E S +++L AE++L+ L L YRVV Sbjct: 15 YSNEDGNYGSEHRGLYRQRTFYKTEVAAVCTPEQSEQLQQQLLQHAEQLLQALQLPYRVV 74 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS------- 373 LC G+ F+A +DLEVW+ G + E+SS S C ++Q+RR+N R+R+ +S Sbjct: 75 QLCAGETAFAAAVCFDLEVWMPGLQRFLEVSSVSNCRDYQARRLNLRFRNTSSPPQQQQQ 134 Query: 374 ------------KSLKFTHTLNGSGVAVGRCLIAILENYL--NADG--SVTIPTVLRPYM 417 K ++ HTLNG+ +AVGR L A++EN+ +G +V +P LRP+ Sbjct: 135 QQRQQQQQQQGRKRPQYCHTLNGTALAVGRVLAALVENHHCTTDEGEPAVKLPPPLRPFF 194 Query: 418 NNLAVIKK 425 N + + Sbjct: 195 NGKTYLTR 202 >gi|68073951|ref|XP_678890.1| seryl-tRNA synthetase [Plasmodium berghei strain ANKA] gi|56499498|emb|CAH98026.1| seryl-tRNA synthetase, putative [Plasmodium berghei] Length = 390 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 93/389 (23%), Positives = 163/389 (41%), Gaps = 72/389 (18%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI R NPE + + KKR + + ++ DEK R I K+E+++ N + Sbjct: 3 LDINLFRTEKGGNPEKIKESEKKRFNDVSNVDKVIEYDEKWRKSIFKLEELKKNINLINK 62 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 IG E V+ LK + ++KE++P+++ EE + ++ + N+ +V I Sbjct: 63 TIGNKKKEDKNVDVEDLKQRSLSMKEEIPLIQNEEKHLLKQRNMYLAKVGNILSSKVVIN 122 Query: 117 TSANENILIRSVGKKPSAI--------------------------------------HLS 138 N ++R+ G+ + Sbjct: 123 NDEEYNKIVRTWGECKNYEATDLEKSDISKEDIPNTKREVGNNNDGQNKVSIISEIKKKY 182 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 H+++ +G ++F + ++G R LTG L A+ Q+ I+ + YT V P Sbjct: 183 YYHYDLLRKIGGVNFKKGVLVAGHRGYYLTGAGFLLNNAIIQYAINF-LANKKYTPVYPP 241 Query: 199 LLVRDEAMYGTGQIPKFADDMFCT----------------------------TDGRWLIP 230 ++ M ++ F + ++ D +LI Sbjct: 242 FFMKKNIMEECAELNDFEETLYKISSSSVASAEDKNIDANSGNNNISNEKSNKDDLFLIA 301 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 TSE L L+ E +ESK LPL++ ++ FR EAG+ G+D RG+LR HQF K E I+ Sbjct: 302 TSEQPLCALHRDETLESKYLPLKYVGISSCFRKEAGAHGKDIRGILRVHQFDKVEQFCIS 361 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRV 319 + S+ HE M+ EE + L++ Y++ Sbjct: 362 LPQTSYKLHEEMIKTCEEFYQSLNIPYKI 390 >gi|296084761|emb|CBI14794.3| unnamed protein product [Vitis vinifera] Length = 351 Score = 163 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 76/273 (27%), Positives = 130/273 (47%), Gaps = 7/273 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 ++ +WIR N + +K R+ E IL L E+ L K++E +R RN + + Sbjct: 84 INFKWIRDNKAVVANNIKNRNSNANLELILELYERVSNLQKEVERLRGERNIVA---SKM 140 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S L E LKE + LE++ + L++ CIPN+ +VPIG Sbjct: 141 KGKMEPSERQKLIEEGKNLKEGVMNLEEDLLRLTDELQQEAQCIPNMTHPDVPIGGEDCS 200 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 L + VG ++H ++G+ L L DFD A ++SG++F L LE AL + Sbjct: 201 -TLRKMVGSPRKFGFTIKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVMLEMALINW 259 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 + + G+T ++ P +VR + G P+ ++ + LI T+E+ + + Sbjct: 260 TLSE-VMKRGFTPLTTPEIVRSSVVEKCGFQPRGSNTQVYSIEGSDQCLIGTAEIPVGGI 318 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + I+ LPL++ + FR+EAG+AG T Sbjct: 319 HMDSILAESLLPLKYVAFSHCFRTEAGAAGTAT 351 >gi|225466909|ref|XP_002269287.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 352 Score = 163 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 7/274 (2%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 ++ +WIR N + +K R+ E IL L E+ L K++E +R RN + + Sbjct: 84 INFKWIRDNKAVVANNIKNRNSNANLELILELYERVSNLQKEVERLRGERNIVA---SKM 140 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S L E LKE + LE++ + L++ CIPN+ +VPIG Sbjct: 141 KGKMEPSERQKLIEEGKNLKEGVMNLEEDLLRLTDELQQEAQCIPNMTHPDVPIGGEDCS 200 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 L + VG ++H ++G+ L L DFD A ++SG++F L LE AL + Sbjct: 201 -TLRKMVGSPRKFGFTIKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVMLEMALINW 259 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 + + G+T ++ P +VR + G P+ ++ + LI T+E+ + + Sbjct: 260 TLSE-VMKRGFTPLTTPEIVRSSVVEKCGFQPRGSNTQVYSIEGSDQCLIGTAEIPVGGI 318 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + I+ LPL++ + FR+EAG+AG TR Sbjct: 319 HMDSILAESLLPLKYVAFSHCFRTEAGAAGTATR 352 >gi|38014242|gb|AAH01020.2| SARS2 protein [Homo sapiens] Length = 142 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 45/120 (37%), Positives = 73/120 (60%), Gaps = 1/120 (0%) Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 IL L LH+RV+ + T +LG A + +D+E W+ G+ + E++S S C +FQSRR++ + Sbjct: 2 ILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMF 61 Query: 369 RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 + + L+F HT+N + AV R LIA+LE+ DGSV +P L+ Y+ + H+ Sbjct: 62 QTEAGE-LQFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYLGTDRITAPTHV 120 >gi|32698519|dbj|BAC79250.1| seryl-tRNA synthetase [Streptococcus bovis] Length = 240 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 86/243 (35%), Positives = 130/243 (53%), Gaps = 5/243 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR + + + L R + + + LD+K R L+ K E +A RN+ SA I Sbjct: 1 MLDIKRIRNDFDEVAKKLATRGVAAEKLAELKELDDKRRELLVKSESAKAERNTASAAIA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 QA N L + + E E+ L + + +PN+P +VP+G Sbjct: 61 QAKR--NKEDASEQIAAMQKLSADIKATDAELAEIDEKLSEFTATLPNIPAADVPVGADE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 +EN+ +R G + H+++GE L ++D++R K++G+RF G A LERA+ Sbjct: 119 DENVEVRRWGTPREFDFDIKAHWDLGEDLDILDWERGAKVTGSRFLFYKGLGARLERAIY 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTN 238 FM+D H E GYTEV P +V ++M+GTGQ PKF +D F D ++ IPT+EV LTN Sbjct: 179 NFMLDEHAKE-GYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSDYVLIPTAEVPLTN 237 Query: 239 LYS 241 Y Sbjct: 238 YYR 240 >gi|146332793|gb|ABQ22902.1| mitochondrial seryl-tRNA synthetase precursor-like protein [Callithrix jacchus] Length = 130 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 1/108 (0%) Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH 380 + T +LG A + +D+E W+ G+ + E++S S C +FQSRR++ ++ + L+F H Sbjct: 2 DMPTQELGLPAYRKFDIEAWMPGRGHFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAH 60 Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 T+N + AV R LIA+LE+ DGSV +P L+PY+ + H+ Sbjct: 61 TVNATACAVPRLLIALLESNQQKDGSVLVPPALQPYLGTDRITAPTHV 108 >gi|325118207|emb|CBZ53758.1| putative seryl-tRNA synthetase [Neospora caninum Liverpool] Length = 552 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 88/288 (30%), Positives = 125/288 (43%), Gaps = 49/288 (17%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT-----SEHGYTEVSAPLL-VRDE 204 D + T+++G R S L G LA L R L + +D + E+ P L V Sbjct: 290 TDGEATTRMAGRRHSALQGMLARLHRGLKNYFLDFLLSLEIGDGKKFKEIGVPPLIVSRS 349 Query: 205 AMYGTGQIPKFADDM---------FCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 + GTGQ+P+ + + + +LIPT+EV L Y + I + LP+R Sbjct: 350 TLEGTGQLPRLENGLFALSATPNCQIAGEDAFLIPTAEVPLVGFYRQKRIAEEELPIRIA 409 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 P FR E G+ GR RG+LRQ F K E V I E + EH R+ S + +LK L + Sbjct: 410 AATPCFRLEDGTYGRWNRGLLRQQVFEKVESVVICTPEQAEREHARLRSIGKTLLKELQI 469 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS 375 +R V LC+GD+ +A YDLE W+ + E+SS S C ++Q R D K Sbjct: 470 PFREVLLCSGDMSATAAICYDLEAWVPSLQGFLEVSSISNCWDYQFIR-----EDQAGKR 524 Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 V IP L+PY+ L I Sbjct: 525 R-----------------------------GVRIPKPLQPYLAGLEEI 543 >gi|213423724|ref|ZP_03356704.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 197 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 112/199 (56%), Gaps = 2/199 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G N Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDTLLAEIRDIALTIPNLPADEVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 +N+ + G R+H +GE +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 DNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAPL 199 FM+DLHT +HGY+E P Sbjct: 179 FMLDLHTEQHGYSENYVPY 197 >gi|145642030|ref|ZP_01797602.1| seryl-tRNA synthetase [Haemophilus influenzae R3021] gi|145273301|gb|EDK13175.1| seryl-tRNA synthetase [Haemophilus influenzae 22.4-21] Length = 221 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 3/216 (1%) Query: 1 MLDIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M+D +R N + LK KR+ +E + +L+++ + L E+++A RN+ S IG Sbjct: 1 MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A A G + L E + QL + + V + + ++ IPN+P +EVP+G Sbjct: 61 AAKARG--EDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDD 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 EN I G + ++H +GE +DF KL+GARF+V+ G +A + RAL Sbjct: 119 TENKEILRWGTPRTFDFEVKDHVTLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALA 178 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 QFM+DLHT +HGY E P LV +YGTGQ+PKF Sbjct: 179 QFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKF 214 >gi|165940924|gb|ABY75307.1| seryl-tRNA synthetase [Ovis aries] Length = 245 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 72/233 (30%), Positives = 118/233 (50%), Gaps = 15/233 (6%) Query: 141 HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 H ++ + + ++ ++G+R L G L LE+AL QF + GYT + P Sbjct: 14 HVDLVVMVDGFEGEKGAVVAGSRGYFLKGPLVFLEQALIQFALRT-LESRGYTPIYTPFF 72 Query: 201 VRDEAMYGTGQIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESK 248 +R E M Q+ +F ++++ + ++LI TSE + L+ E + + Sbjct: 73 MRKEVMQEVAQLSQFDEELYKVIGKGSERSDDNSFEEKYLIATSEQPIAALHRDEWLRPE 132 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCA 306 LP+++ L+ FR E GS GRDTRG+ R HQF K E + S+ E M++ A Sbjct: 133 DLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATA 192 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 EE + L + Y +V++ +G L +A K DLE W G +RE+ SCS C ++ Sbjct: 193 EEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDY 245 >gi|323185401|gb|EFZ70765.1| seryl-tRNA synthetase domain protein [Escherichia coli 1357] Length = 79 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 45/78 (57%), Positives = 56/78 (71%) Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADG 405 YREISSCS +FQ+RRM +R R + K + HTLNGSG+AVGR L+A++ENY ADG Sbjct: 1 TYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADG 60 Query: 406 SVTIPTVLRPYMNNLAVI 423 + +P VLRPYMN L I Sbjct: 61 RIEVPEVLRPYMNGLEYI 78 >gi|90076434|dbj|BAE87897.1| unnamed protein product [Macaca fascicularis] Length = 175 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 5/131 (3%) Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M++ AEE + L + Y +V++ +G L +A K DLE W G +RE+ SCS C Sbjct: 1 MFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCT 60 Query: 358 NFQSRRMNSRYRDPNSK--SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 ++Q+RR+ RY ++F H LN + A R + AILENY G +T+P L+ Sbjct: 61 DYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKE 119 Query: 416 YM--NNLAVIK 424 +M +I Sbjct: 120 FMPPGLQELIP 130 >gi|169838960|ref|ZP_02872148.1| seryl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 184 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 3/176 (1%) Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA---DDMFCTTDGRWLIPTSEVSLTNLYS 241 G ++ P +V G G PK ++ F + LI T+E LT ++ Sbjct: 6 NFLINKGAKFLTVPHMVNTRVAEGAGFAPKGDTSGNEYFIEGEDLTLIGTAEAPLTGYHA 65 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 EI+E LPL + +P +R EAG+ G+ RG+ R HQF K E+ E S HE+ Sbjct: 66 DEILEENDLPLFYVGYSPCYRKEAGTYGKHARGLFRVHQFNKLEMYMYCLPEQSRDMHEK 125 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +LS EE+ + + + YRVV++ GDLG A K YD+E W YRE++SCS C Sbjct: 126 ILSLEEELWQAIGIPYRVVNIAAGDLGAPAAKKYDIEYWSPADEKYRELTSCSNCT 181 >gi|261200743|ref|XP_002626772.1| seryl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239593844|gb|EEQ76425.1| seryl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] Length = 448 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 80/459 (17%), Positives = 151/459 (32%), Gaps = 113/459 (24%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DI+ IR+N R+ ++ I L ++ L + + + + + I Sbjct: 65 DIKHIRENAALYSQNCIDRNYHDLAQYPYEIQRLSAESHELQVALREPQRKIKQIESAIA 124 Query: 60 QAIAEGNL---SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + + + + + + + + ++E+L L + L + E +G Sbjct: 125 KLRKDSSDSCNADPEEKQKQKTKVEEELSTLRLSAQHLKDQSHHLTTTRAAHAKEIERLG 184 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 S R + H + + LT A LE+ Sbjct: 185 LSLPNLTKPRKHPPREPEPPRPPSHAQ-----------------RWGWYYLTNEAALLEQ 227 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL 236 AL Q+ + + G+ VS P LV W +P S Sbjct: 228 ALIQYALRVALRG-GWQAVSPPSLV---------------------ELFGWAMPDSAGEG 265 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 T + P+ + G A + +D Sbjct: 266 TTRKA----------------TPASNGKGGGAAVTATTLF----------------DDIL 293 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ------------ 344 +L+ + L++ DLG SA + D+EV + Sbjct: 294 ALQTEILTALNLPCRVLEMPAH-------DLGASAARKQDIEVLFPSRMASSHSSSPTEN 346 Query: 345 --------------NLYREISSCSTCGNFQSRRMNSRYRDP--NSKSLKFTHTLNGSGVA 388 + + E++S S C ++Q+RR+ +R + + + KF HT+NG+ +A Sbjct: 347 ATSNATSNNDIDVESGWGEVTSASICTDYQTRRLGTRLKSDAGDGGAGKFPHTVNGTAMA 406 Query: 389 VGRCLIAILENYLNA-DGSVTIPTVLRPYMNNLAVIKKE 426 V R + A+LE+ + G V +P VLR +M + VI + Sbjct: 407 VPRIIAALLEHGWDEKKGVVVLPEVLRTWMGGIGVIGGK 445 >gi|226358659|gb|ACO51182.1| seryl-tRNA synthetase [Hypophthalmichthys nobilis] Length = 196 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 14/191 (7%) Query: 197 APLLVRDEAMYGTGQIPKFADDMF------------CTTDGRWLIPTSEVSLTNLYSHEI 244 P +R E M Q+ +F ++++ T D ++LI TSE + E Sbjct: 1 TPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNTVDEKYLIATSEQPIAAFLRDEW 60 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED--SFTEHERM 302 ++ + LP+R+ ++ FR E GS GRDTRG+ R HQF K E D S+ + M Sbjct: 61 LKPEDLPIRYAGMSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEM 120 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSR 362 + AEE + L + YR+V++ +G L +A K DLE W G +RE+ SCS C ++Q+R Sbjct: 121 VGTAEEFYQSLGIPYRIVNIVSGALNHAASKKLDLEAWFPGSQAFRELVSCSNCTDYQAR 180 Query: 363 RMNSRYRDPNS 373 R+ RY Sbjct: 181 RLRIRYGQTKK 191 >gi|75764284|ref|ZP_00743826.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488229|gb|EAO51903.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 86 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 40/73 (54%), Positives = 49/73 (67%) Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS C FQ+RR N R+R + + HTLNGSG+A+GR + AILENY DG++ IP Sbjct: 14 SCSNCEAFQARRANIRFRREPNGKPEHVHTLNGSGLAIGRTVAAILENYQQEDGTIIIPE 73 Query: 412 VLRPYMNNLAVIK 424 VLRPYM VIK Sbjct: 74 VLRPYMGGKTVIK 86 >gi|75764283|ref|ZP_00743825.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488228|gb|EAO51902.1| Seryl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 224 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 89/216 (41%), Positives = 133/216 (61%), Gaps = 1/216 (0%) Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + E++ + E V L++L+ IPN+P E P+G + ++N++ R+ G+ Sbjct: 1 MREVGEKVKDFDNELRTVEEDLERLMLSIPNIPHESAPVGETEDDNVVARTWGEVKEFTF 60 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 + H+++ LG++DF+RA K++G+RF G A LERAL FM+DLHT EHGY EV Sbjct: 61 EPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVL 120 Query: 197 APLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSEVSLTNLYSHEIIESKSLPLRFT 255 P +V +M GTGQ+PKF +D F + IPT+EV +TN++ EI+ + LP+R+ Sbjct: 121 PPYMVNRASMTGTGQLPKFEEDAFRIESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYA 180 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 + FRSEAGSAGRDTRG +RQHQF K + + Sbjct: 181 AFSSCFRSEAGSAGRDTRGXIRQHQFNKVGACEVRK 216 >gi|124783895|gb|ABN14955.1| seryl-aminoacyl-tRNA synthetase 1 [Taenia asiatica] Length = 166 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 61/144 (42%), Positives = 84/144 (58%), Gaps = 2/144 (1%) Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +LI TSE ++ + E + LPLR+ ++ FR E GS GRDTRG+ R HQF K E Sbjct: 20 YLIATSEQTIAAYHRGEWMSPTELPLRYAGISTCFRQEVGSHGRDTRGIFRVHQFEKVEQ 79 Query: 287 VSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 IT S+ + M+S AE K L + YRVVS+ +G+L +A YDLE W G Sbjct: 80 FCITSPYDNASWEMFDEMISTAERFFKVLGIPYRVVSIVSGELNNAAAMKYDLEGWYPGS 139 Query: 345 NLYREISSCSTCGNFQSRRMNSRY 368 +RE+ SCS C ++QSRR+ R+ Sbjct: 140 KAFRELVSCSNCTDYQSRRLGIRF 163 >gi|320539581|ref|ZP_08039246.1| putative seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Serratia symbiotica str. Tucson] gi|320030340|gb|EFW12354.1| putative seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Serratia symbiotica str. Tucson] Length = 196 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 2/198 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R + + + S +E+ ++L K E ++A RNS S IG Sbjct: 1 MLDPNLLRNERDAVAAKLVRRGFKLDLDLLRSQEERRKVLQVKTEALQAERNSRSKSIGT 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + E + ++ +PN+P + VP G + Sbjct: 61 AKARG--EDIEPLRGEVNELGEKLDAAKTELDALQREIRDYALTLPNLPDDSVPCGKDDS 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 EN I G+ R+H ++GE G +DF A KL+G+RF V+ G +A + RAL Q Sbjct: 119 ENQEISRWGEPRQYDFAVRDHVDLGEMAGGLDFAAAVKLTGSRFVVMKGQIARMHRALSQ 178 Query: 181 FMIDLHTSEHGYTEVSAP 198 FM+DLHT +HGY E P Sbjct: 179 FMLDLHTEQHGYLEAYVP 196 >gi|207109877|ref|ZP_03244039.1| seryl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 148 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 85/148 (57%), Positives = 106/148 (71%), Gaps = 1/148 (0%) Query: 214 KFADDMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 KF +D+F + +LIPT+EV+LTNLY+ II ++LP++ T P FRSEAGSAG+DT Sbjct: 1 KFKEDVFKIENENLYLIPTAEVTLTNLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDT 60 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 RGM+RQHQF K ELV+IT ++S E ML A ILK L+L +R V LC+GDLGFSA Sbjct: 61 RGMIRQHQFDKVELVAITHPKESDAMQEHMLESASTILKALELPHRFVQLCSGDLGFSAS 120 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQ 360 T D+EVWL GQN YREISS S +FQ Sbjct: 121 NTIDIEVWLPGQNCYREISSVSNTRDFQ 148 >gi|313635894|gb|EFS01856.1| seryl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 77 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 37/73 (50%), Positives = 49/73 (67%) Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPT 411 SCS +FQ+RR N R+R ++ HTLNGSG+A+GR + AILENY +ADGSV IP Sbjct: 1 SCSNFESFQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENYQDADGSVRIPK 60 Query: 412 VLRPYMNNLAVIK 424 L+ YM + I+ Sbjct: 61 ALQGYMGGVERIE 73 >gi|157929912|gb|ABW04144.1| Seryl-tRNA synthetase [Epinephelus coioides] Length = 342 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 18/301 (5%) Query: 74 KNETSTL-KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + L E + + ++ + + I N+ VPI +E+ + Sbjct: 11 IKQVRLLVDEAVQKGDSLRLKLEEQRFEYLREIGNLLHPSVPISNDEDEDNRVER-TWGD 69 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 A H ++ + + ++ ++G+R L G L LE+AL Q+ + Y Sbjct: 70 CAAQRKYSHVDLVVMVDGYEGEKGAVVAGSRGYFLKGPLVFLEQALIQYALQT-LYMKKY 128 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTT------------DGRWLIPTSEVSLTNLY 240 T + P +R E M Q+ +F ++++ D ++LI TSE + Sbjct: 129 TPLYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSERSDDSSLDEKYLIATSEQPIAAFL 188 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTE 298 E ++ + LPLR+ ++ FR E GS GRDTRG+ R HQF K E + S+ Sbjct: 189 REEWLKPEDLPLRYAGISTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVFSSPHDNKSWEM 248 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + M+ AEE + L + YR+V++ + L +A K DLE W G + +RE+ S C + Sbjct: 249 FDEMIGTAEEFYQSLGIPYRIVNIVSRALNHAASKKLDLEAWFPGSSAFRELVSA-HCTD 307 Query: 359 F 359 + Sbjct: 308 Y 308 >gi|195093186|ref|XP_001997702.1| GH24998 [Drosophila grimshawi] gi|193905713|gb|EDW04580.1| GH24998 [Drosophila grimshawi] Length = 160 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 3/118 (2%) Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 M+ AE+ + L + YR+V++ +G L +A K DLE W G YRE+ SCS C ++Q+ Sbjct: 1 MIDNAEQFCQSLGIPYRIVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQA 60 Query: 362 RRMNSRYRDPNSKS--LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 RR+ RY + + + H LN + A R + AILE + G + +P L+ YM Sbjct: 61 RRLLVRYGQTKKMNAAVDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKRYM 117 >gi|72012298|ref|XP_785096.1| PREDICTED: similar to Seryl-aminoacyl-tRNA synthetase 2 [Strongylocentrotus purpuratus] gi|115656142|ref|XP_001203542.1| PREDICTED: similar to Seryl-aminoacyl-tRNA synthetase 2 [Strongylocentrotus purpuratus] Length = 477 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 80/417 (19%), Positives = 169/417 (40%), Gaps = 42/417 (10%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQ----------SEYILSLDEKNRILIKKIEDIRARR 51 LD + ++ E + +++ R++E + + + L+E+ + +K + + R Sbjct: 70 LDFNALLRDGEKFEKSIEARNMELEGINIPEMISIWKEVCDLEEQKNQMERKKKALNTRA 129 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 S Q G ++ + + L E ++E++ L + + + L L +PN Sbjct: 130 KELSKQKGGSVTKEKVQL------EGRKIREEVKSLNTSLNGLMNRLYPLALALPNSLHS 183 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 VP+G ++ +VG ++ +EH I + + G L Sbjct: 184 AVPVGDEN---VVKETVGDGLVSLESRKEHPSISTHHP---------MVHPGYCYTEGEL 231 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWL 228 E L H + +G+T + P + + G + ++ + L Sbjct: 232 VIKELDLVSSAAS-HLASNGFTRFAMPDMYKPLLREALGLNAEEFNETYAIQTRENLMHL 290 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 TS + Y + ++E+ LP R + + + A SA +G+ Q+Q + E+ Sbjct: 291 AGTSPMGFLAYYMNSVLEASDLPQRCFAVGRHYNAAAESA--KFQGLHHQYQDSRLEIFG 348 Query: 289 ITR--EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 ++ E+ S + L +++ DL +RVV + + +L + +E+W+ + Sbjct: 349 VSEGAEDSSNALLFQYLHIVTDLISTFDLPFRVVEVSSKNLLPCMHRQMAVELWIPSERN 408 Query: 347 YREISSCSTCGNFQSRRMNSRYRD------PNSKSLKFTHTLNGSGVAVGRCLIAIL 397 Y E+++ C +F SRR+ RY S+ F HT++G+ + L A+L Sbjct: 409 YIEVANVCNCTDFISRRLKIRYPTNPRESAAQSRKRSFGHTIHGTALKTSVLLSAML 465 >gi|118129267|ref|XP_001236908.1| PREDICTED: seryl-tRNA synthetase, partial [Gallus gallus] Length = 281 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 63/158 (39%), Gaps = 7/158 (4%) Query: 266 GSAGRDTRGMLRQH--QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 A R + R H C+ + R C + Sbjct: 71 CDAERVSAAGSRSHAVHPQTCQGEVMGRGHQHRHTLWGTPLCWRCPRPIPAVPLEERGGP 130 Query: 324 TG--DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSK--SLKFT 379 G L +A K DLE W G +RE+ SCS C ++Q+RR+ R+ ++F Sbjct: 131 NGFCALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRFGQTKKMMDKVEFV 190 Query: 380 HTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 H LN + A R + AILENY +G + +P LR +M Sbjct: 191 HMLNATMCATTRTICAILENYQTEEG-IVVPERLRDFM 227 >gi|255580580|ref|XP_002531114.1| seryl-tRNA synthetase, putative [Ricinus communis] gi|223529310|gb|EEF31279.1| seryl-tRNA synthetase, putative [Ricinus communis] Length = 355 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 31/283 (10%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N E + + +K R+ E +L L EK + K++E +R RN+ + + Sbjct: 79 IDFKWIRDNKEEVALNIKNRNSNANLELVLELYEKMLAVQKEVERLRGERNAVA---NKM 135 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + L +E + CIPN+ VPIG Sbjct: 136 KGKLEPLERQKLIDEEAQ------------------------CIPNMTHPHVPIGVEDCL 171 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + ++H ++G+ L L DFD A ++SG++F L LE AL + Sbjct: 172 TVRKTM-CSPREFSFPVKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVMLEMALVNW 230 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 + + G+T ++ P LVR + G P+ + + LI T ++ + + Sbjct: 231 TLSE-VMKRGFTPLTTPELVRASVVEKCGFQPREDNTQVYSIEGSDQCLIGTRKIPVGGI 289 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 + I+ LPL++ + FR+EAG+AG TR + + F Sbjct: 290 HMESILTESMLPLKYVAFSHCFRTEAGAAGTATRYLSEHYLFH 332 >gi|58697511|ref|ZP_00372773.1| seryl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] gi|58536027|gb|EAL59709.1| seryl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] Length = 249 Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats. Identities = 97/244 (39%), Positives = 151/244 (61%), Gaps = 3/244 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHL-EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M DI++IR+NPE + A+K R + E +E IL +D + R L K++D+ +RN + +I Sbjct: 8 MHDIEYIRKNPEGFEKAMKSRGIRESTAEEILEIDHEKRSLTTKLQDLNRQRNEITEEIK 67 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + S + + ++ ++ + +E L ++S +PN+P ++VPIG Sbjct: 68 KLKMS--KSPCEEQIELSKSITNEIEAISLKEQAEKDKLVNVLSNLPNIPAQDVPIGADE 125 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 N N+ +R G K + H+E+GE LGL+DF++A ++SG+RF++L G LA L RAL Sbjct: 126 NSNLEVRRYGGKRQFDFVPESHYELGEKLGLIDFEQAARISGSRFTILKGQLAKLGRALI 185 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 M+++H +E GYTEV P LV++EAMY GQ+PKF+DD + TTD LIPTSEV LTNL Sbjct: 186 NCMLEMHVNEFGYTEVYHPALVKNEAMYNVGQLPKFSDDSYLTTDELRLIPTSEVFLTNL 245 Query: 240 YSHE 243 + + Sbjct: 246 VADK 249 >gi|258563464|ref|XP_002582477.1| hypothetical protein UREG_07250 [Uncinocarpus reesii 1704] gi|237907984|gb|EEP82385.1| hypothetical protein UREG_07250 [Uncinocarpus reesii 1704] Length = 134 Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 13/132 (9%) Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ---------NLYREISS 352 MLS EIL L+L R++ + T DLG SA + D+E + + + E++S Sbjct: 1 MLSIQTEILSSLNLPCRILEMPTADLGASAARKQDIEALFPSRMNPAAAADTSGWGEVTS 60 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD-GSVTIPT 411 S C ++QSRR+ +R R ++ +F HT+NG+ VAV R L AILEN + G V +P Sbjct: 61 ASICTDYQSRRLGTRVRTASA--ARFPHTVNGTAVAVPRVLAAILENGWDEKRGGVVVPE 118 Query: 412 VLRPYMNNLAVI 423 VLR +M + +I Sbjct: 119 VLRDWM-GMEMI 129 >gi|255545814|ref|XP_002513967.1| seryl-tRNA synthetase, putative [Ricinus communis] gi|223547053|gb|EEF48550.1| seryl-tRNA synthetase, putative [Ricinus communis] Length = 184 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 27/114 (23%) Query: 322 LCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRD--------PNS 373 + + DLG A + D+E W+ ++QSRR+ RYR Sbjct: 1 MASADLGAPAFRKSDVEAWMP---------------DYQSRRLGIRYRPLDPTLRNPKKG 45 Query: 374 K----SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 K KF HTLN + AV R LI +LENY DGSV IP LRP+M ++ Sbjct: 46 KSSLAPTKFVHTLNETACAVPRMLICLLENYQQEDGSVVIPEPLRPFMGGRKLL 99 >gi|255545812|ref|XP_002513966.1| seryl-tRNA synthetase, putative [Ricinus communis] gi|223547052|gb|EEF48549.1| seryl-tRNA synthetase, putative [Ricinus communis] Length = 380 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 8/258 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +WIR N E + + +K R+ + E +L L EK + K++E +R RN+ + + Sbjct: 84 IDFKWIRDNKEEVALNIKNRNSNAKLELVLELYEKMLAVQKEVERLRGERNAVA---NKM 140 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + S L +E LK L LE++ + L++ CIPN+ VPIG Sbjct: 141 KGKLEPSERQKLIDEGKNLKG-LMTLEEDMLKHTDELQQEAQCIPNMTHPAVPIGVEDCS 199 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + VG ++H ++G+ L L DFD ++SG++F L LE AL + Sbjct: 200 TVR-KMVGSPHEFSFPVKDHLQLGKELDLFDFDATAEVSGSKFYYLKNEAVMLEMALIDW 258 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSLTNL 239 + + G+ ++ P LVR + G P+ + + LI T+E+ + + Sbjct: 259 TLSE-VMKRGFIPLTTPELVRASVVEKCGFQPRGDNTQVYSIEGSDQCLIGTAEIPVGGI 317 Query: 240 YSHEIIESKSLPLRFTTL 257 + I+ LPL++ Sbjct: 318 HMESILTESMLPLKYVAF 335 >gi|195108453|ref|XP_001998807.1| GI23429 [Drosophila mojavensis] gi|193915401|gb|EDW14268.1| GI23429 [Drosophila mojavensis] Length = 466 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 125/392 (31%), Gaps = 23/392 (5%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA-IAEGNLSLVDAL 73 ++ R L E +L+ + ++++ + R + ++ + G L+D L Sbjct: 52 QQSIDSRGLNINLESVLAKYATYQTHHEQLQRLEDEREKVTKELKLLTKSAGKSELLDKL 111 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 + L+ ++ L++ + + +PNV P Sbjct: 112 RARGKELRNEVKSLKQTLYPIEDDFIHDYLHLPNVLHAHCPQTDEEKLIYRH-------- 163 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 + L D + AH + Q M+ + + Sbjct: 164 --KPPPTATPVAMHLDRKDL---IHFLDNNRYYMMEQAAHFDVDAMQAMVRYFVTHGDFI 218 Query: 194 EVSAPLLVRDEAMYGTG------QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIES 247 + P VR + + + + + S + + Sbjct: 219 QTCNPDFVRCVLLEANATPLSQYHLVREEHLLNKLNTAYLTGGGAFESFLGTVTKLSVYP 278 Query: 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS-ITREEDSFTEHERMLSCA 306 LPLR+ S+ E G A T + Q + +++ E E++L+ A Sbjct: 279 SVLPLRYVACGRSYNREEGLANGPTPSLYTATQTNAVQSFVATQTADEADAELEQVLNMA 338 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 K LD+ +R+V + L S +EV+ Y + S G++ S+R Sbjct: 339 INFYKALDVPFRIVYVPAASLTPSESLRASIEVYAPSLKRYVCVGRISNYGDYVSKR--I 396 Query: 367 RYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 + K +F H + G + R + A++E Sbjct: 397 LFSTRREKHYEFLHLVGGPVLYTTRLIAALIE 428 >gi|118566778|gb|ABL01708.1| unknown [Salmonella enterica subsp. enterica serovar Typhi] gi|118566909|gb|ABL01766.1| unknown [Salmonella enterica subsp. enterica serovar Typhi] Length = 145 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 80/145 (55%), Positives = 96/145 (66%), Gaps = 8/145 (5%) Query: 206 MYGTGQIPKFADDMFCTTD--------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTL 257 +YGTGQ+PKFA D+F T LIPT+EV LTNL EII+ LP++ T Sbjct: 1 LYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAH 60 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 P FRSEAGS GRDTRG++R HQF K E+V I R EDS E M AE++L+ L L Y Sbjct: 61 TPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPY 120 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLA 342 R + LCTGD+GF ACKTYDLEVW+ Sbjct: 121 RKIILCTGDMGFGACKTYDLEVWVP 145 >gi|194746468|ref|XP_001955702.1| GF18895 [Drosophila ananassae] gi|190628739|gb|EDV44263.1| GF18895 [Drosophila ananassae] Length = 461 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 64/397 (16%), Positives = 133/397 (33%), Gaps = 23/397 (5%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA-IAEGNLSLV 70 E L+ ++ R L E +L+ +K + +++ + R + + ++ + A GN + Sbjct: 50 ELLEQSIASRGLNINLETVLNKYQKYQAHHEQLRKVAEDREAVTKKLKELSKAGGNDDQL 109 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + LK +L+ L L++ + + +PN E P + Sbjct: 110 EQLKERGKSLRNDLKNLKQALYPIEDDFIHDYLHLPNRLHELCPTEGEEKLLYRHQVPSS 169 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 P + L+ F + AH + Q + ++ Sbjct: 170 TP-------DTLSHLANKELIHF------VDNNRYYMMEQAAHFDVNAMQSLARYFVTKG 216 Query: 191 GYTEVSAPLLVRDEAMYGTG------QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEI 244 + + + P VR + + + + S + Sbjct: 217 DFIQTANPDFVRCVLLEANATPMDDYHMVREEHLQNKINTAYLTGGAAFESYLGAMTKLC 276 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS-ITREEDSFTEHERML 303 + LPLR+ S+ + + Q + D+ ++ E++L Sbjct: 277 VYPSVLPLRYVCCGRSYNRAEAELNGPSPSLYTATQSNAVQSFVATQTASDADSQLEQIL 336 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRR 363 + A + K +D+ +RVV + +L S LEV+ Y + S G+F S+R Sbjct: 337 NLAVDFYKAIDVPFRVVYVAAKNLTPSENLRAVLEVYAPSLKRYVCVGRVSNYGDFVSKR 396 Query: 364 MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + K F H + G + R + A+LE+ Sbjct: 397 --ILFSTRREKHYDFLHLVGGPVLYTSRLIAALLEHN 431 >gi|195400060|ref|XP_002058636.1| GJ14532 [Drosophila virilis] gi|194142196|gb|EDW58604.1| GJ14532 [Drosophila virilis] Length = 466 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 64/397 (16%), Positives = 139/397 (35%), Gaps = 23/397 (5%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG-NLS 68 + L+ ++ +R L E +L+ + +++ + R++ + ++ G + + Sbjct: 47 DRAVLEQSIARRGLAIDLEEMLTKYATYQTHHEQLLRLEEERDAITKELKLLTKSGGSAA 106 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 ++ L+ L+ ++ L++ + + +PN P + Sbjct: 107 QLEELRARGKVLRNEVKALKQSLYPIEDDFIHDFLHLPNGLHSHCPQTNVEKLIYRHK-- 164 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 P A+ R H + E + +D +R + AH + Q + + Sbjct: 165 --TPPAVEQPRWHLDRKELVHFVDNNR---------YYMMEKAAHFDVDAMQALARYFVT 213 Query: 189 EHGYTEVSAPLLVRDEAMYGTG------QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH 242 + + S P VR + + + + + S + Sbjct: 214 HGDFVQTSNPDFVRCVLLEANATPLSQYHLVREEHLLNKLNTAYLTGGGAFESFLGTLTK 273 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE-DSFTEHER 301 + LPLR+ S+ E A T + Q + + T+ E D+ E Sbjct: 274 LCVYPSVLPLRYVACGRSYNREEALAYGPTPSLYTATQTNAVQSLVATQTEADADAALEH 333 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 +L+ A + K LD+ +R+V + L + +EV+ Y + S G+F S Sbjct: 334 VLNLAIDFYKSLDIPFRIVYVTAERLTPAESLRASIEVYAPSLKRYVCVGRISNYGDFVS 393 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 +R + K F H + G + R + A++E Sbjct: 394 KR--ILFSTRRDKHYDFLHLVGGPVLYTTRLIAALIE 428 >gi|289807962|ref|ZP_06538591.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 185 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 88/185 (47%), Positives = 114/185 (61%), Gaps = 8/185 (4%) Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 EVP+G N+N+ + G R+H +GE +DF A KL+G+RF V+ G + Sbjct: 1 EVPVGKDENDNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQI 60 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------- 224 A + RAL QFM+DLHT +HGY+E P LV + +YGTGQ+PKFA D+F T Sbjct: 61 ARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADS 120 Query: 225 -GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 LIPT+EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K Sbjct: 121 SNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDK 180 Query: 284 CELVS 288 E+V Sbjct: 181 VEMVQ 185 >gi|194909924|ref|XP_001982038.1| GG12371 [Drosophila erecta] gi|190656676|gb|EDV53908.1| GG12371 [Drosophila erecta] Length = 464 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 68/400 (17%), Positives = 145/400 (36%), Gaps = 25/400 (6%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 + + LD ++ R L+ E +L E+ + ++ + R + + ++ + G + Sbjct: 51 DRQSLDQSISSRGLDISLEKVLRKYEQYKAHHGQLSKLAEERETVTKRLKELTKSGGNAD 110 Query: 70 -VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 ++ LK +L+ L L++ + + +PN+ + P+G Sbjct: 111 HLEELKERGKSLRNDLKTLKQALYPIEDDFIHDYLHLPNLLHVQCPVGGEEKLLYRHGM- 169 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 PS+ + + H E E + +D +R L AH + Q + + Sbjct: 170 ---PSSENKTPSHLERQELIHFVDNNR---------YYLMEQAAHFDVNAMQSLARYFVT 217 Query: 189 EHGYTEVSAPLLVRDEAMYG-----TGQIPKFADDMFCTTDGRWLIPTSE-VSLTNLYSH 242 + + + P VR + + + + + +L + S + Sbjct: 218 HGDFIQTANPDFVRCVLLEANATPLSDYHLVLEEHLQNKINTAYLTGGASFESYLGAMTK 277 Query: 243 EIIESKSLPLRFTTLAPSF-RSEAGSAGRDTRGMLRQHQFWKCELVS-ITREEDSFTEHE 300 + LPLR+ S+ R+EA G + Q + ++ ++ E Sbjct: 278 LCVYPSVLPLRYVCCGRSYNRAEAQLYGPI-PSLYTATQTNAVQSFVATQTASEADSQLE 336 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +L+ A + K LD+ +R+ L + +EV+ Y + S G+F Sbjct: 337 HILNLATDFYKALDIPFRISYATAAALTPAESIRAVIEVYAPSLQRYVCVGRISNYGDFV 396 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 S+R + K F H + G + R + A+LE+ Sbjct: 397 SKR--ILFSTRREKHYDFLHLVGGPVLYTSRLIAALLEHG 434 >gi|322789618|gb|EFZ14833.1| hypothetical protein SINV_00090 [Solenopsis invicta] Length = 123 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Query: 330 SACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAV 389 + D+E W+ G+ LY E+SSCS C ++QSRR+N +YR N HTLNG+ A+ Sbjct: 7 KEKRKCDMEGWMPGRKLYGELSSCSNCTDYQSRRLNIKYRMKNGNVTH-VHTLNGTACAI 65 Query: 390 GRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHILE 430 R LIA+ E Y + +P L M +IKK+ + + Sbjct: 66 PRMLIALCETYQTKHHRIAVPIELMSLMKGKTLIKKQPVAD 106 >gi|307208299|gb|EFN85724.1| Seryl-tRNA synthetase, mitochondrial [Harpegnathos saltator] Length = 417 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 73/417 (17%), Positives = 139/417 (33%), Gaps = 29/417 (6%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 E L + R ++ + + E R + + R Q S + Sbjct: 2 EKLQEEIALRGMDIDVVQLKNSWEFYRQMNMDKRALEDRLAELKNSKKQLKRSEQTSEIQ 61 Query: 72 ----ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 L + ++E + +++ ++ ++ + + +PN PI +L Sbjct: 62 QELHKLGLQQKVIQEDIKTMKQAIWDMDDNVVRRVLKLPNNLDPRTPI---VESMVLRSV 118 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 S++ SR H EIG LG K L A E + + Sbjct: 119 GNAPDSSVPESRTHVEIGTRLG------LLKYQNPMSYYLCNKAALFELGVLAHADRVLI 172 Query: 188 SEHGYTEVSAPLLVRDEAMYG---------TGQIPKFADDMFCTTDGRWLIPTSE--VSL 236 +V R + G + + + +++ + R + S Sbjct: 173 DGDNMLKVIGTDFGRSLVVEGLGLDHEDPMSAFLIENHEEVERDSSNRMHLIGGACLPSF 232 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSF-RSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 L++ ++I PL++ + S A SA + +V + E+ Sbjct: 233 LTLHAKQLINPNDFPLKYLATGRQYTPSPADSALCGLFTACQASVAHVFTMVKDGKSEEY 292 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCST 355 T ++++ + L HYRVV L E+W Y E+ S Sbjct: 293 RTLFDQLVDNVCRLYDDLCDHYRVVMKSAPQLEPWESLRVSFELWSPSAKRYIEVGHLSA 352 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 CG++ S+R+ Y+ +S F + G+ ++V R L +LE N V P V Sbjct: 353 CGDYFSKRLLITYQTSTGRS--FPAAITGTVLSVPRLLGCLLE--QNPHKFVIPPKV 405 >gi|195144908|ref|XP_002013438.1| GL24144 [Drosophila persimilis] gi|194102381|gb|EDW24424.1| GL24144 [Drosophila persimilis] Length = 466 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 61/394 (15%), Positives = 133/394 (33%), Gaps = 23/394 (5%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS-LVDAL 73 + ++ R L+ E + +K + ++++ + R + + + + +G ++ L Sbjct: 56 EQSIASRGLDISVESVFRKYQKYQTHHEQLQRVVGEREAVTKNLKEVTKKGGSELQIEEL 115 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 K + TL+ L L++ + + +PN + P + + +L+ S Sbjct: 116 KEQGKTLRNDLKALKQALYPIEDDFIHDFLHLPNRLHAQCP---TGDREVLLYRHSLPGS 172 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 ++ E L+ F + AH + Q + ++ + Sbjct: 173 TSNVP----SHLERKDLIHF------VDNNRYYMMEQAAHFDVNAMQSLGRYFVTKGDFV 222 Query: 194 EVSAPLLVRDEAMYGTG------QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIES 247 + + P VR + + + + S + + Sbjct: 223 QTANPDFVRCVLLEANATPLADYHMVREEHLQNKINTAYLTGGAAFESYLGAMTKLCVYP 282 Query: 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS-ITREEDSFTEHERMLSCA 306 LPLR+ S+ T + Q + +++ + E +LS A Sbjct: 283 SVLPLRYVCCGRSYNRAEAQHYGPTPSLYTATQTNAVQSFVATQTADEANAQLEHILSLA 342 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 + K LD+ +R+V L S +EV+ Y + S G+F S+R Sbjct: 343 IDFYKALDVPFRIVYAPAASLTPSESLRAVIEVYAPSLQRYVCVGRISNYGDFVSKR--I 400 Query: 367 RYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + K F H + G + R + A+LE+ Sbjct: 401 LFSTRREKHYDFLHLVGGPVLYTTRLIAALLEHN 434 >gi|24649556|ref|NP_732958.1| CG31133 [Drosophila melanogaster] gi|16648296|gb|AAL25413.1| LD24627p [Drosophila melanogaster] gi|23172134|gb|AAN13983.1| CG31133 [Drosophila melanogaster] gi|220944862|gb|ACL84974.1| CG31133-PA [synthetic construct] gi|220954708|gb|ACL89897.1| CG31133-PA [synthetic construct] Length = 464 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 67/398 (16%), Positives = 145/398 (36%), Gaps = 25/398 (6%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS-LV 70 + L+ ++ R L+ + E +LS EK + ++ + R + ++ + G+ + + Sbjct: 53 QFLEQSISSRGLDIRLETVLSKYEKYKTHHAQLSKVAEERERVTKRLKELTKSGSSAVQL 112 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + LK +L+ +L L++ + + +PN+ + P+G Sbjct: 113 EELKEHGKSLRNELKALKQTLYPIEDDFIHDYLHLPNLLHVQCPVGGEEKLLYRHGI--- 169 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 P + + + H E + +D +R L A + Q + + Sbjct: 170 -PKSENKTTSHLARQELVHFVDNNR---------YYLMEQAALFDVNAMQSLARYFVNHG 219 Query: 191 GYTEVSAPLLVRDEAMYGTG------QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEI 244 + + + P VR + + + S S + Sbjct: 220 HFIQTANPDFVRCVLLEANATPLSDYHLVQEEHLQNKINTAYLTGGASFESYLGAMTKLC 279 Query: 245 IESKSLPLRFTTLAPSF-RSEAGSAGRDTRGMLRQHQFWKCELVSITREED-SFTEHERM 302 + LPLR+ S+ R+EA G + Q ++ T+ ++ + ++ E + Sbjct: 280 VYPSVLPLRYVCCGRSYNRAEADLYGPI-PSLYTATQTNAVQIFVATQTDNEADSQLEHI 338 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSR 362 L+ A + K LD+ +R+ DL + +EV+ Y + S G+F S+ Sbjct: 339 LNLATDFYKALDIPFRISYATAADLTPAESIRAVIEVYAPSLQRYVCVGRISNYGDFVSK 398 Query: 363 RMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 R + K F H + G + R + A++E+ Sbjct: 399 R--ILFSTRREKHYDFLHMVGGPVLYTSRLIAALVEHG 434 >gi|125775127|ref|XP_001358815.1| GA16033 [Drosophila pseudoobscura pseudoobscura] gi|54638556|gb|EAL27958.1| GA16033 [Drosophila pseudoobscura pseudoobscura] Length = 466 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 61/393 (15%), Positives = 134/393 (34%), Gaps = 23/393 (5%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL-VDAL 73 + ++ R L+ E + ++ + ++++ + R + + + + +G ++ L Sbjct: 56 EQSIASRGLDISLESVFRKYQEYQTHHEQLQRVVGDREAVTKNLKELTKKGGSEQQIEEL 115 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 K + TL+ L L++ + + +PN + P + ++ +L+ S Sbjct: 116 KEQGKTLRNDLKALKQALYPIEDDFIHDFLHLPNRLHAQCP---TGDQEVLLYRHSLPGS 172 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 ++ E L+ F + AH + Q + ++ + Sbjct: 173 TGNVP----SHLERKDLIHF------VDNNRYYMMEQAAHFDVNAMQSLGRYFVTKGDFV 222 Query: 194 EVSAPLLVRDEAMYGTG------QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIES 247 + + P VR + + + + S + + Sbjct: 223 QTANPDFVRCVLLEANATPLADYHMVREEHLQNKINTAYLTGGAAFESYLGAMTKLCVYP 282 Query: 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS-ITREEDSFTEHERMLSCA 306 LPLR+ S+ T + Q + E++ + E +LS A Sbjct: 283 SVLPLRYVCCGRSYNRAEAQHYGPTPSLYTATQTNAVQSFVATQTAEEANAQLEHILSLA 342 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 + K LD+ +R+V L S +EV+ Y + S G+F S+R Sbjct: 343 IDFYKTLDVPFRIVYAPAASLTPSESLRAVIEVYAPSLQRYVCVGRISNYGDFVSKR--I 400 Query: 367 RYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 + K F H + G + R + A+LE+ Sbjct: 401 LFSTRREKHYDFLHLVGGPVLYTTRLIAALLEH 433 >gi|255557769|ref|XP_002519914.1| seryl-tRNA synthetase, putative [Ricinus communis] gi|223540960|gb|EEF42518.1| seryl-tRNA synthetase, putative [Ricinus communis] Length = 250 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 111/286 (38%), Gaps = 40/286 (13%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD+ R+ NPE + + ++R IL LD++ R +++++R N + Sbjct: 1 MLDMNLFREEKGHNPEFIRESQRRRFANVDMVDIL-LDKEWRQRQYELDNLRRDFNKINK 59 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 Q+ + L + N + +K + E + + L + + + N+ + VP+ Sbjct: 60 QVVELKTA--LEDATEMINNGNQIKRSIGENEAQVQDAALGLNQKLEQVGNLVHDSVPVS 117 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++L K+ + H E+ + L + D + +G R L G L + Sbjct: 118 HDELRSLLNDWDAKRFEPEFELKNHAELVQLLRIADTVKGANAAGGRGFYLKGAGVRLNQ 177 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL 236 AL F +D + G+T + + + M Q+ +F ++ Sbjct: 178 ALINFALDF-LEKKGFTTLQTSFFMIKDIMAKCAQLAQFMKNL----------------- 219 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 +R+ + FR EAG+ G DT G+ + HQF Sbjct: 220 ---------------IRYAGYSSCFRKEAGAHGHDTLGIFQVHQFE 250 >gi|195573371|ref|XP_002104667.1| GD18320 [Drosophila simulans] gi|194200594|gb|EDX14170.1| GD18320 [Drosophila simulans] Length = 464 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 64/402 (15%), Positives = 141/402 (35%), Gaps = 24/402 (5%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 R+ + LD ++ R L+ E +LS EK + ++ + R + ++ + G Sbjct: 49 FRE-RQSLDQSISSRGLDIPLETVLSKYEKYKTHHAQLSKVVEERERVTKRLKELTKSGG 107 Query: 67 LS-LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + ++ LK + +L+ +L L++ + + +PN+ + P+G Sbjct: 108 SAVQLEELKEQGKSLRNELKALKQTLYPIEDDFIHDYLHLPNLLHAQSPVGGEEKLLYRH 167 Query: 126 RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL 185 P + + + H E + +D +R L A+ + Q + Sbjct: 168 GM----PKSDNKTTSHLARQELVHFVDNNR---------YYLMEQAAYFDVNAMQSLARY 214 Query: 186 HTSEHGYTEVSAPLLVRDEAMYG-----TGQIPKFADDMFCTTDGRWLIPTSE-VSLTNL 239 + + + + P VR + T + + + +L + S Sbjct: 215 FVNHGDFIQTANPDFVRCVLLEANATPLTDYHLVQEEHLQNKINTAYLTGGASFESYLGA 274 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS-ITREEDSFTE 298 + + LPLR+ S+ + Q + ++ T+ Sbjct: 275 MTKLCVYPSVLPLRYVCCGRSYNKAEAKLYGPIPSLYTATQTNAVQSFVATQTANEADTQ 334 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E +L+ A + K +D+ +R+ L + +EV+ Y + S G+ Sbjct: 335 LEHILNLATDFYKAVDIPFRISYATAAALTPAESLRAVIEVYAPSLQRYVCVGRISNYGD 394 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 F S+R + K F H + G + R + A++E+ Sbjct: 395 FVSKR--ILFSTRREKHYDFLHLVGGPVLYTSRLIAALVEHG 434 >gi|238567850|ref|XP_002386324.1| hypothetical protein MPER_15476 [Moniliophthora perniciosa FA553] gi|215437939|gb|EEB87254.1| hypothetical protein MPER_15476 [Moniliophthora perniciosa FA553] Length = 103 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%) Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 M++ +EE + L L Y+VV + +G L +A YDLE W Q Y+E+ SCS C ++Q+ Sbjct: 1 MVANSEEFYQSLGLRYQVVGIVSGALNLAAAMKYDLEAWFPFQRAYKELVSCSNCTDYQA 60 Query: 362 RRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 RR+ R + + + H LNG+ A R L ++ENY Sbjct: 61 RRLEVRCGLKTKDQTRKVYCHMLNGTLCATERALCCLVENYQT 103 >gi|195037052|ref|XP_001989979.1| GH19093 [Drosophila grimshawi] gi|193894175|gb|EDV93041.1| GH19093 [Drosophila grimshawi] Length = 465 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 69/397 (17%), Positives = 136/397 (34%), Gaps = 24/397 (6%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG-NLS 68 + LD ++ R L E +LS + + +++ + R+S + Q+ G + Sbjct: 47 DRAALDHSISSRGLNINLETVLSKYKNYQTHHEQLLRLEKERDSITKQLKLLTKSGGSSE 106 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 ++AL+ L+ L+++ + + +PN + P + + Sbjct: 107 QLNALRENGKVLRNDAKELKQKLYPIEDDFIHEFLHLPNSLHSQCPASDVEKLIYMHK-- 164 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 SR E L+ F L AH + + Q + + + Sbjct: 165 ------PTASRSSTSHLERKDLVHF------VNNNCYYLMEQAAHFDVRVMQSLANYFVT 212 Query: 189 EHGYTEVSAPLLVRDEAMYG-----TGQIPKFADDMFCTTDGRWLIPTSE-VSLTNLYSH 242 + + S P VR + T + + + +L S + Sbjct: 213 RGDFVQTSNPDFVRCVLLEANATPLTHYYLVQEEHLQNKLNTAYLTGCGSFESFLGAMTK 272 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS-ITREEDSFTEHER 301 + LP+RF S+ E T + Q + +++ TE ER Sbjct: 273 LSVYPSVLPMRFVACGRSYNREEALLYGPTPSLYTATQTNAVQSFVATQTADEADTELER 332 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 +L+ A + K LD+ +R+V L S +EV+ Y + S G++ S Sbjct: 333 VLNLAVDFYKSLDVPFRIVYTPAVSLTASESLRASIEVYAPSLKRYVCLGRISNFGDYVS 392 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILE 398 +R + K F H + G + R + A++E Sbjct: 393 KR--ILFSARREKHFDFLHLVGGPVLYTTRLIAALIE 427 >gi|195504920|ref|XP_002099286.1| GE10826 [Drosophila yakuba] gi|194185387|gb|EDW98998.1| GE10826 [Drosophila yakuba] Length = 464 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 68/400 (17%), Positives = 141/400 (35%), Gaps = 25/400 (6%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG-NLS 68 + + LD ++ R L+ + E +L+ E+ + ++ + R + + ++ G Sbjct: 51 DRQSLDQSISSRGLDIRLESVLAKYEQYKAHHAQLSKVAEERETVTKRLKVLTKSGGKAD 110 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 ++ LK +L+ L IL++ + + +PN+ + P+G Sbjct: 111 QLEELKERGKSLRNDLKILKQALYPIEDDFIHDYLHLPNLLHVQCPVGGEEKLLYRHGM- 169 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 P++ + + H E + +D +R L AH + Q + + Sbjct: 170 ---PNSENKTPSHLARKELVHFVDNNR---------YYLMEQAAHFDVKAMQSLARYFVT 217 Query: 189 EHGYTEVSAPLLVRDEAMYGTG------QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH 242 + + + P VR + + + S S + Sbjct: 218 RGDFIQTANPDFVRCVLLEANATPLSDYHLVQEEHLQNKINTAYLTGGASFESYLGAMTK 277 Query: 243 EIIESKSLPLRFTTLAPSF-RSEAGSAGRDTRGMLRQHQFWKCELVS-ITREEDSFTEHE 300 + LPLR+ S+ R+EA G + Q + ++ T+ E Sbjct: 278 LCVYPSVLPLRYVCCGRSYNRAEAQLYGPI-PSLYTATQTNAVQSFVATQTASEADTQLE 336 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 +L+ A + K +D+ +R+ L + +EV+ Y + S GNF Sbjct: 337 HILNLATDFYKAVDIPFRISYATAAALTPAESIRAVIEVYAPSLQRYVCVGRISNYGNFV 396 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 S+R + K F H + G + R + A+LE+ Sbjct: 397 SKR--ILFSTRREKHYDFLHLVGGPVLYTSRLIAALLEHG 434 >gi|195331528|ref|XP_002032453.1| GM23510 [Drosophila sechellia] gi|194121396|gb|EDW43439.1| GM23510 [Drosophila sechellia] Length = 464 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 67/403 (16%), Positives = 144/403 (35%), Gaps = 26/403 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 R+ + LD ++ R L+ + E +LS EK + ++ + R + ++ + G Sbjct: 49 FRE-RQSLDQSISSRGLDIRLETVLSKYEKYKTHHAQLSKVVEERERVTKRLKELTKSGG 107 Query: 67 LS-LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + ++ LK + +L+ +L L++ + + +PN+ + P+G Sbjct: 108 SAVQLEELKQQGKSLRNELKALKQTLYPIEDDFIHDYLHLPNLLHAQSPVGGEEKLLYRH 167 Query: 126 RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL 185 P + + H E + +D +R L A+ + Q + Sbjct: 168 GM----PKSDSKTTSHLTRQELVHFVDNNR---------YYLMEQAAYFDVNAMQSLAHY 214 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTG------QIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 + + + + P VR + + + S S Sbjct: 215 FVNHGDFIQTANPDFVRCVLLEANATPLSDYHLVQEEHLQNKINTAYLTGGASFESYLGA 274 Query: 240 YSHEIIESKSLPLRFTTLAPSF-RSEAGSAGRDTRGMLRQHQFWKCELVSITRE-EDSFT 297 + + LPLR+ S+ R+EA G + Q + T+ ++ T Sbjct: 275 MTKLCVYPSVLPLRYVCCGRSYNRAEAKMYGPI-PSLYTATQTNAVQSFVATQTGNEADT 333 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + + +L+ A + K +D+ +R+ L + +EV+ Y + S G Sbjct: 334 QLDHILNLATDFYKAVDIPFRISYATAPALTPAESIRAVIEVYAPSLQRYVCVGRISNYG 393 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 +F S+R + K F H + G + R + A++E+ Sbjct: 394 DFVSKR--ILFSTRREKHYDFLHLVGGPVLYTSRLIAALVEHG 434 >gi|332026290|gb|EGI66427.1| Seryl-tRNA synthetase, mitochondrial [Acromyrmex echinatior] Length = 482 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 74/417 (17%), Positives = 155/417 (37%), Gaps = 31/417 (7%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE----- 64 N + L L R ++ + + ++ + + ++ + Sbjct: 67 NVDKLQKNLALRGIDVDIVLLKEAWDFYTKVVADRYALENNNKKLTDRMKTLLENVEHTA 126 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + L+ + +++ L +++ ++ + + + +PN P+G ++ Sbjct: 127 EQEQEMLKLRTQLKIIRQDLKTMKEAMWDLNEDVIEKVLKLPNELDPRTPVGEP----VI 182 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG----- 179 ++SVG P R H +IG +L L+++ L+ A E A+ Sbjct: 183 LKSVGNLPEISEKKRGHLDIGTSLDLLEYKNP------MCYFLSNDAALFELAILAHAGR 236 Query: 180 ----QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVS 235 MI + ++ + V + E T I + + + L+ + ++ Sbjct: 237 VLGENNMIKIVGTDFSRSFVVEASGLNHEDPMTTFMIENHNEIERGSPNRMHLVGGASLA 296 Query: 236 -LTNLYSHEIIESKSLPLRFTTLAPSF-RSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 L++ ++I K+ PL++ + S S + + +V + E Sbjct: 297 SFLALHTKQLINPKNFPLKYFATGKQYVPSPRDSHTYGLFTVCQASVAHSFIMVKDAKSE 356 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 + E +L + L HYRVV +L S E+W N Y EI Sbjct: 357 EYKILFEELLEIVCRLYDDLCDHYRVVMRPASELQSSEEMRVSFEMWSPFMNQYIEIGHV 416 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 ST G++ S+R+ Y+ + +F ++G+ ++V R L +LE NAD IP Sbjct: 417 STYGDYISKRLLIVYQTSTGR--EFPSIISGTILSVPRLLACLLE--QNAD-RFVIP 468 >gi|206595314|emb|CAQ62241.1| hypothetical seryl-trna synthetase (partial sequence) protein [Ralstonia solanacearum IPO1609] Length = 963 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 2/149 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDIQ +R++ + + L R E +L+ + + + + E+++ARRNS S QIG Sbjct: 1 MLDIQLLRKDIDAVAARLNDRGYELDVAGFAALEAERKAIQTRTEELQARRNSLSKQIGM 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +G A+ E S + ++L + V + L+ L+ +PNVP E VP G Sbjct: 61 LKGKG--EDASAVMAEVSGIGDELKASAAQLDVVQTRLQDLLLSMPNVPHESVPAGKDET 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALG 149 +N+ +R G + ++H ++G LG Sbjct: 119 QNVEVRREGTPRAFDFAVKDHVDLGAGLG 147 >gi|167041403|gb|ABZ06155.1| putative Seryl-tRNA synthetase N-terminal domain protein [uncultured marine microorganism HF4000_006O13] Length = 165 Score = 122 bits (307), Expect = 9e-26, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 2/161 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + IR + +++ L +R ++ + +L+LD K R L +++D+R+ +N+ S IG Sbjct: 1 MLDPKRIRIDRKYVAKNLARRGVKINLDEVLALDSKRRQLQSQLDDLRSEKNTVSKGIGL 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A +E V K+ L + L LEKE +++ + L PN+ E VP G + Sbjct: 61 AKSETKA--VSESKSRMRALNQDLKNLEKELNKLSAQLNAFYLDFPNLLHESVPDGDEES 118 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG 161 N IR G+ ++H ++G+ LGL+DF+ A K+SG Sbjct: 119 MNQEIRVWGEPRVFDFKVKDHVKLGQDLGLLDFETAAKISG 159 >gi|9944875|gb|AAG03019.1|AF264627_1 uncharacterized gastric protein YC12P [Homo sapiens] Length = 84 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%) Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 L +N YRE+SS S CG+FQ++RM RY+ + +T+NGSG+A+ R + ILE Y Sbjct: 1 LPSENRYREVSSISICGDFQAQRMKLRYK--EDGKTLYANTINGSGLAIDRIIAIILEQY 58 Query: 401 LNADGSVTIPTVLRPYMNNLAVIKKE 426 G + IP VL PY + I + Sbjct: 59 QTESGYIEIPEVLIPYFGKIKQITNK 84 >gi|195445168|ref|XP_002070204.1| GK11931 [Drosophila willistoni] gi|194166289|gb|EDW81190.1| GK11931 [Drosophila willistoni] Length = 465 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 63/402 (15%), Positives = 128/402 (31%), Gaps = 26/402 (6%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA---EGN 66 + L+ ++ +R L+ + +LS K + ++ + R S + Q+ E Sbjct: 47 DKTELERSIARRWLDVNLDAVLSKYHKYQSHQGELLRLDEERESVTKQLKVLAKSCQEVE 106 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 ++V LK L+ + IL++ + + +PN+ + P G Sbjct: 107 EAVVQQLKERGKKLRNDVKILKQTIYPIEDDFIHDFLNLPNLLHSQCPSGQEETLLYRHA 166 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 E + + AH + Q + Sbjct: 167 LPENARKKGPSHLER------------EDLIHFVDNNRYYMMDQAAHFDVNAMQALARYF 214 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTG------QIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 ++ + + + P R + + K S S Sbjct: 215 VTKGDFIQTANPDFARCVLLEANATPLEHYHLVKEEHLQNKLNTAFLTGGGSFESYLGAM 274 Query: 241 SHEIIESKSLPLRFTTLAPSF-RSEAGSAGRDTRGMLRQHQFWKCELVS-ITREEDSFTE 298 + + LPLR+ S+ R+E+ G + + Q + + + Sbjct: 275 TKLCVYPSVLPLRYVCCGRSYSRAESHQYGSLS-SLYTATQTNAVQCFIATQTSNQADEQ 333 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 E +L+ A + K LD+ +R+V L + +EV+ Y + S GN Sbjct: 334 LEHVLNLAIDFYKALDVPFRIVYAPATSLTSAESLRAVVEVYAPSLQRYISVGRISNYGN 393 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + S+R + K F H + G + R + A+LE+ Sbjct: 394 YVSKR--ILFSTRRGKEYDFLHLIGGPVLYTSRLIAALLEHG 433 >gi|260898068|ref|ZP_05906564.1| serine--tRNA ligase N-terminal domain protein [Vibrio parahaemolyticus Peru-466] gi|308088961|gb|EFO38656.1| serine--tRNA ligase N-terminal domain protein [Vibrio parahaemolyticus Peru-466] Length = 143 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 74/143 (51%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E +V + L + +PN+P +EVP G N Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELEQVMAQLDEFTLSVPNIPADEVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIHLSREHFE 143 +N+ I G+ + ++H + Sbjct: 121 DNVEISRWGEPKTYDFDLKDHVD 143 >gi|207723089|ref|YP_002253496.1| seryl-trna synthetase protein [Ralstonia solanacearum IPO1609] gi|206588281|emb|CAQ18981.1| probable seryl-trna synthetase protein [Ralstonia solanacearum IPO1609] Length = 71 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 1/70 (1%) Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 G+F +RRM +R+R+ + HTL GSG+AVGR L+A+LENY NADGSVT+P LRP Sbjct: 1 MGDFHARRMQARFRNAQG-LPELLHTLKGSGLAVGRTLVAVLENYQNADGSVTVPAALRP 59 Query: 416 YMNNLAVIKK 425 Y+ V+K Sbjct: 60 YLGGQDVLKP 69 >gi|153840603|ref|ZP_01993270.1| seryl-tRNA synthetase N- domain [Vibrio parahaemolyticus AQ3810] gi|149745733|gb|EDM56863.1| seryl-tRNA synthetase N- domain [Vibrio parahaemolyticus AQ3810] Length = 137 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 70/136 (51%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + L +R + E I L+E+ + + ++E++++ RNS S QIGQ Sbjct: 1 MLDSKLLRTELDETAAKLARRGFKLDVETIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 +A G+ + +K + TL L + E +V + L + +PN+P +EVP G N Sbjct: 61 KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELEQVMAQLDEFTLSVPNIPADEVPDGKDEN 120 Query: 121 ENILIRSVGKKPSAIH 136 +N+ I G+ + Sbjct: 121 DNVEISRWGEPKTYDF 136 >gi|332535761|ref|ZP_08411503.1| seryl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332034829|gb|EGI71363.1| seryl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 93 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 47/87 (54%), Positives = 61/87 (70%) Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + AE+IL+ L+L YR V LC GD+GF + KTYDLEVWL Q+ YREISSCS +FQ Sbjct: 6 ELTGHAEQILQALELPYRKVILCIGDMGFGSAKTYDLEVWLPAQDTYREISSCSNMADFQ 65 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGV 387 +RRM +R+R K + +TLNGSG+ Sbjct: 66 ARRMQARFRREGVKKPELLNTLNGSGL 92 >gi|289805589|ref|ZP_06536218.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 118 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 2/117 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S IGQ Sbjct: 1 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 A A G ++ L+ E + L E+L + E + + ++ + IPN+P +EVP+G Sbjct: 61 AKARG--EDIEPLRLEVNKLGEELDAAKAELDTLLAEIRDIALTIPNLPADEVPVGK 115 >gi|254372617|ref|ZP_04988106.1| predicted protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570344|gb|EDN35998.1| predicted protein [Francisella novicida GA99-3549] Length = 169 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 94/167 (56%), Gaps = 4/167 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD ++I+ N + + L R + + ++K + L ++ +D++++RN+ S +IGQ Sbjct: 1 MLDAKYIKDNLQQVAEKLATRGYQFDIAEFEAQEQKRKHLQERTQDLQSQRNTISKEIGQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+G + + + + E+L I+EKE ++ ++ + + +PN+P ++VP+G N Sbjct: 61 KKAKG--EDTSDIFAKVNQINEELKIIEKELKDLQDTINQTLLSMPNLPADDVPVGKDEN 118 Query: 121 ENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGARFS 165 +N+ IR G +++H +IGE L ++DF A K++G+ F Sbjct: 119 DNVEIRRWGTPREFHPEAPAKDHADIGEILKMIDFKAAAKVTGSPFY 165 >gi|226330730|ref|ZP_03806248.1| hypothetical protein PROPEN_04650 [Proteus penneri ATCC 35198] gi|225201525|gb|EEG83879.1| hypothetical protein PROPEN_04650 [Proteus penneri ATCC 35198] Length = 132 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 2/132 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD +R + + L +R E I +E+ ++L + E ++A RNS S IG Sbjct: 1 MLDPNLLRNELDAVAEKLARRGFTLDVEKIRQQEERRKVLQVETESLQAERNSRSKSIGA 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A A G ++ L+ E + L E+L + + E + + ++ IPN+P + VP G + Sbjct: 61 AKARG--EDIEPLRQEVNLLGEKLEVAKAELEVLQAEIRDYALTIPNMPDDSVPNGKDDS 118 Query: 121 ENILIRSVGKKP 132 EN+ + G Sbjct: 119 ENVEVSRWGHTK 130 >gi|156536858|ref|XP_001604018.1| PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] Length = 477 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 83/419 (19%), Positives = 160/419 (38%), Gaps = 37/419 (8%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS---AQIGQAI--AE 64 + E L L R ++ + E + + E + + + +I Q + Sbjct: 65 DIEKLQRELSLRGSAIDAKDLQKSWEYYQYVHSNKETLEQKHAELTNRIKEIYQKKDLSA 124 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + + ++AL + +K+ + ++ + ++ ++ + +PN P S ++ Sbjct: 125 EDKNEIEALITKIRLIKQDIKVVREAIWDLQETVIPEVLKLPNEIDPHTP---SDAAIVV 181 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 K+ + H +IG LGL+++ + L E + Sbjct: 182 KSIGEKRDVPEDKRQSHLDIGRHLGLLEYKNPIQ------CYLCNEAVVFE-LGASAVAS 234 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF---------ADDM--FCTTDGRWLIPTSE 233 +E G T V+ P R + G G + DD+ + L+ + Sbjct: 235 RILNESGATRVAGPDFARSLVVEGAGMDHESPMETFILQNMDDIEKDYLINRLHLVGGAS 294 Query: 234 VS-LTNLYSHEIIESKSLPLRFT----TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 + L +Y+ + I+ S PL+ P F S S G + + LV Sbjct: 295 LPALLAMYTKQAIKLNSFPLKVFTTGRQYTP-FPSSPASYGLF--SVCQSSAIQALTLVP 351 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 ++ +E E ++ A +I LD HYR+V +L + E+W A N Y Sbjct: 352 KKDNDNHKSELENLVETASKIYDELDCHYRIVLRSAKELRTAESMRVSFEMWSAHSNQYI 411 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 E+ S CG++ S+R++ Y+ S + F T+ G+ ++V R L +LE N D V Sbjct: 412 EVGHVSACGDYFSKRLSFAYQTSKS-HVGFPATITGTLLSVPRVLGCLLE--ENPDKFV 467 >gi|241711528|ref|XP_002413428.1| seryl-tRNA synthetase, putative [Ixodes scapularis] gi|215507242|gb|EEC16736.1| seryl-tRNA synthetase, putative [Ixodes scapularis] Length = 436 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 73/417 (17%), Positives = 135/417 (32%), Gaps = 19/417 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 L+I + + + L+ R++ L ++ +R +N + Sbjct: 24 LEIDKLVNDIPTIRRTLEARNIPLDISL----------LSTQLPSLRIVKNEFNRVQMAI 73 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + L + + + +L + +K+ + + + + Sbjct: 74 MEITRILSDHRLLSASEKPESELRAELSSHYTTEREVKQSMYAKEEDVVPTILRIPNFIR 133 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + F + + D + R L A LE +L ++ Sbjct: 134 APTDNVSSLFKEYGNRPKFAFSPASHVDIGGSDIVFR-DHPRLCYLKADPALLELSLIRY 192 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS 241 + G+ VS+P V D + G G+ P D + L S Sbjct: 193 FDQKLSGLAGFEPVSSPDWVVDTVVEGCGKNPMDLDHTLVIESKEH-NGGHQHHLVGSAS 251 Query: 242 HEIIESKSLPLRFTTLAPSF----RSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 E + + L + R A G+ Q + + + +E + Sbjct: 252 FESFAAYMTRRQVGKLPACYYSLGRFYAAHCDALLPGLYSLAQSERASVFAACKESELEN 311 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E +L + K L + +R+ + L F D+EVW + Y S G Sbjct: 312 TFEELLVEVLQWYKELKIPFRLRLVEPVQLRFIESLRVDIEVWSPALDSYVPCGWFSLHG 371 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIA-ILENYLNADGSVTIPTVL 413 +F SRR+ + +KF HTL G VA CL A I+EN D + P VL Sbjct: 372 DFVSRRL-IMVHGAGASDVKFAHTLFG-CVANIHCLAASIMENGQTKDCCFSFPAVL 426 >gi|307167220|gb|EFN60924.1| Seryl-tRNA synthetase, mitochondrial [Camponotus floridanus] Length = 484 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 75/422 (17%), Positives = 147/422 (34%), Gaps = 35/422 (8%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA------ 63 N + L L R + + S R +I + ++NS G + Sbjct: 67 NMDKLHKELALRRMNVDIVQLKSAWNFYRKMIADRCALE---DNNSKLTGHKRSLLERTD 123 Query: 64 --EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + L+ + +++ L +++ ++ + + I +PN + Sbjct: 124 RTAEQEQELKKLRIQLDIVRQDLKTIKEAIWDLDEDVMERILKLPNELDP---KTPANES 180 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 +L S R H +IG +L L+D+ L + A E A+ Sbjct: 181 IVLKSIGSAPESFKKNRRSHIDIGTSLDLLDYKNP------MCYYLCNNAALFELAVLTH 234 Query: 182 ---------MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 MI + ++ + V + E T I + + + L+ ++ Sbjct: 235 VSRVFDESNMIKMAGTDFSRSFVVEASGLNHEDPMATFIIENHNEVERGSPNRMHLVGSA 294 Query: 233 E-VSLTNLYSHEIIESKSLPLRFTTLAPSF-RSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 VS L++ ++I PL++ + + + + +V Sbjct: 295 SLVSFLILHTRQLINPNHFPLKYFATGRQYMPLPRDTHACGLFTVCQASVAHAFVVVKDA 354 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + E+ T+ ++L + L HYRVV +L E+W N Y EI Sbjct: 355 KSEEYETQFNKLLESVCRLYDDLCDHYRVVMRSASELQPCESLRVSFEMWSPFANQYIEI 414 Query: 351 SSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 S N+ S+R+ Y+ P + F ++G+ ++V R L +LE N D V P Sbjct: 415 GHVSAYDNYLSKRLLIAYQTPYGR--DFPAIISGTVLSVPRLLACLLE--QNPDKFVVPP 470 Query: 411 TV 412 + Sbjct: 471 KI 472 >gi|322800367|gb|EFZ21371.1| hypothetical protein SINV_04645 [Solenopsis invicta] Length = 483 Score = 110 bits (274), Expect = 6e-22, Method: Composition-based stats. Identities = 66/417 (15%), Positives = 138/417 (33%), Gaps = 30/417 (7%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE----- 64 N + L L R ++ + + ++ + S +I + Sbjct: 66 NIDKLQKNLTLRGIDMDVVQLKEAWDFYMKIMADKYALEDNNTELSGRIKTLLENAERTA 125 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 V L+ + +++ L +++ ++ ++ + + +PN P+ + Sbjct: 126 EQEQEVLKLRTQLKIIRQDLKTIKEAIWDMEENVIERVLKLPNELDPRTPLDKPVILKSV 185 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG----- 179 + R H +IG L L+++ + L+ E + Sbjct: 186 G---NVLQVSEKNIRSHIDIGTNLNLLEYKNPL------YYYLSNDAVLFELGVLAHAGR 236 Query: 180 -----QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV 234 + + T V A L ++ M + + S + Sbjct: 237 VLGENNMIKMIGTDFSRSLLVEASGLNHEDPMAAFLIENHNEVERDSPNRMHLVGGASLI 296 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSF-RSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 S L++ ++I KS PL++ + + S + +V ++ E Sbjct: 297 SFLALHTKQLINPKSFPLKYFATGRQYTPLQRDSHACGLFTACQASVAHAFVVVKDSKSE 356 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 E +L + L HYRV+ +L E+W N Y EI Sbjct: 357 LYKISFEELLETVCRLYNDLCEHYRVIVRSASELQSCEEMRASFEMWSPFMNRYVEIGHV 416 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 S G++ S+R+ Y+ P + F ++G+ ++V R L +LE N + IP Sbjct: 417 SAYGDYFSKRLLIAYQTPTGR--DFPAIISGTVLSVPRLLACLLE--QNPN-RFVIP 468 >gi|242005192|ref|XP_002423455.1| seryl-tRNA synthetase, putative [Pediculus humanus corporis] gi|212506543|gb|EEB10717.1| seryl-tRNA synthetase, putative [Pediculus humanus corporis] Length = 462 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 76/431 (17%), Positives = 150/431 (34%), Gaps = 30/431 (6%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D++ + L + +R LE + SL + + L + R+ + I Sbjct: 43 IDLEKKFEEISKLKQNVDRRKLEIDPLKLKSLWDFLKYLELTKLQLEKRKTQIADNIKDL 102 Query: 62 IAEGN----LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 GN ++ LK E ++E L L K EV + +PN ++ P G Sbjct: 103 KKIGNDGEAKQEMEKLKIEGRIVREDLKTLMKAFWEVEEKVIMKGLSLPNELHKDTPDGE 162 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + I+ H +IG+ L+D+ L A E A Sbjct: 163 DKIVHQYK-----DRPIINQKYSHLDIGQKQNLIDYR------DPSLCYLKSEAALFELA 211 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----------TDGRW 227 + + Y S P VR + G G + +F Sbjct: 212 TSSYFSEG-LKADEYIPFSNPDFVRSLVVEGCGADHSDPNSIFTVLLPNEKVQPNYRLHL 270 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE-AGSAGRDTRGMLRQHQFWKCEL 286 + S ++ I SLPL++ T+ ++ + G+ Q ++ Sbjct: 271 VGGASIYPFCAFHTKYTIGFSSLPLKYFTVGRQYKPTLQEQDDESSSGLFNLWQRTCVDM 330 Query: 287 VSITREEDSFTE--HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 ++T + + + L+ + ++L H+RVV + L C ++++ + Sbjct: 331 FALTADNYNEMMSIFGKTLNIVINLYEQLGHHFRVVYVNASSLECWECLRASIQMYSCHE 390 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPN-SKSLKFTHTLNGSGVAVGRCLIAILENYLNA 403 Y E+ + S + +R+ Y+ + +F ++G+ V V + L ++E + Sbjct: 391 QKYIEVGNISISDKYICQRLLMSYQMADKDDKSRFMKLVSGTIVDVPKLLGCLIEEQEDE 450 Query: 404 DGSVTIPTVLR 414 D IP L Sbjct: 451 DKKFPIPDFLV 461 >gi|27652558|gb|AAO17727.1| putative seryl-tRNA synthetase [Geobacter metallireducens] Length = 49 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 31/49 (63%), Positives = 37/49 (75%) Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425 +F HTLNGSG+AVGR L+AILENY DG+V IP VLRPYM + I + Sbjct: 1 EFAHTLNGSGLAVGRTLVAILENYQQEDGTVVIPEVLRPYMGGCSSIGR 49 >gi|317472401|ref|ZP_07931726.1| seryl-tRNA synthetase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316900121|gb|EFV22110.1| seryl-tRNA synthetase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 96 Score = 106 bits (264), Expect = 8e-21, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 3/93 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NPE + +K + + P + +L LDEKNR + ++++ +RA RN S Q Sbjct: 1 MLDIKFVRENPEAVKQNIKNKFQDRKLPLVDEVLELDEKNREIKQEVQSLRANRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 IG +A+G + LK E S ++ L +E Sbjct: 61 IGGLMAQGKKEEAEQLKQEVSNQAGRIEELTEE 93 >gi|297578712|ref|ZP_06940640.1| seryl-tRNA synthetase [Vibrio cholerae RC385] gi|297536306|gb|EFH75139.1| seryl-tRNA synthetase [Vibrio cholerae RC385] Length = 54 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 29/53 (54%), Positives = 35/53 (66%) Query: 371 PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 K + HTLNGSG+AVGR ++AILENY ADG + IP VL+ YM L I Sbjct: 1 KGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAIPAVLQKYMGGLTHI 53 >gi|317499280|ref|ZP_07957553.1| seryl-tRNA synthetase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316893449|gb|EFV15658.1| seryl-tRNA synthetase domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 89 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 3/83 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLDI+++R+NP+ + +K + + P + ++ LD++NR + ++++ +RA RN S Q Sbjct: 1 MLDIKFLRENPDVVKQNIKNKFQDRKLPLVDEVIELDKENREIKQEVQALRADRNKLSKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTL 80 IG + +G + +KN L Sbjct: 61 IGALMGQGKKEEAEEVKNRLQHL 83 >gi|27462874|gb|AAO15628.1|AF462068_5 seryl-tRNA synthetase [Rhizobium leguminosarum bv. viciae] Length = 76 Score = 103 bits (256), Expect = 7e-20, Method: Composition-based stats. Identities = 37/76 (48%), Positives = 54/76 (71%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI+WIR+NPE LD AL KR EP ++ +++LDEK R +++ +D+ +RRN S +IG Sbjct: 1 MLDIKWIRENPEALDAALAKRGAEPLAQSLVALDEKRRSAVQRAQDLLSRRNLASKEIGA 60 Query: 61 AIAEGNLSLVDALKNE 76 A+A+ N L + LK E Sbjct: 61 AMAQKNSELAEKLKAE 76 >gi|332855407|ref|XP_001162887.2| PREDICTED: seryl-tRNA synthetase, mitochondrial-like, partial [Pan troglodytes] Length = 260 Score = 103 bits (256), Expect = 7e-20, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 69/177 (38%), Gaps = 21/177 (11%) Query: 272 TRGMLRQHQFWKCELVSITRE------EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 +LR F C + + + + + AE L DL V+ + T Sbjct: 63 VPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGEDLCGWVLDMPTQ 122 Query: 326 DLGFSACKTYDLEVWLAGQNLYREISSC-----------STCGNFQSRRMNSRYRDPNSK 374 +LG A + +D+E W+ + + E+S S C F+ + S P Sbjct: 123 ELGLPAYRKFDIEAWMPCRGRFGEVSPVPLGTGPRALARSLCC-FRPTHLGSSPGSPWGG 181 Query: 375 SLKF---THTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHI 428 L +N + AV R LIA+LE+ DGSV +P L+ Y+ + H+ Sbjct: 182 RLVPSMAVSQVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYLGTDRITAPTHV 238 >gi|47197545|emb|CAF88299.1| unnamed protein product [Tetraodon nigroviridis] Length = 367 Score = 99.1 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 72/314 (22%), Positives = 127/314 (40%), Gaps = 36/314 (11%) Query: 59 GQAIAEGNLSLVDALKNE------TSTLK-------EQLPILEKEEHEVCSSLKKLISCI 105 G+ G ++AL E S +K E + + E + + + + I Sbjct: 61 GRTSRCGGAQDLEALTAETLSSLSVSQIKQVRLLVDEAIGRTDGERLRLEAERFEHLREI 120 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 N+ VPI + + + + H ++ + D ++ ++G+R Sbjct: 121 GNLLHPSVPISNDEDADNKVER-TWGDCCVQKKYSHVDLVVMIDGFDGEKGAVVAGSRGY 179 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-- 223 L G L LE+AL + + Y+ + P +R E M Q+ +F ++++ Sbjct: 180 FLKGPLVFLEQALINYAL-RMLHAKSYSMLYTPFFMRKEVMQEVAQLSQFDEELYKVIGK 238 Query: 224 ----------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 D ++LI TSE + E ++ + LP+R P+ S S RDTR Sbjct: 239 GSEKSEDSSIDEKYLIATSEQPIAAFLRDEWLKPEDLPIR----TPA--SPPASGRRDTR 292 Query: 274 GMLRQHQFWKCELVSITREED--SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 G+ R HQF K E D S+ E M+ AEE + L + YR+V++ +G+ Sbjct: 293 GIFRVHQFEKIEQFVYASPHDGKSWQMFEEMIGTAEEFYQSLGIPYRIVNIVSGESAVPV 352 Query: 332 CKTYD-LEVWLAGQ 344 ++ LE W G Sbjct: 353 RRSGGLLERWAPGS 366 >gi|207093185|ref|ZP_03240972.1| seryl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1] Length = 191 Score = 98.3 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 100/192 (52%), Gaps = 4/192 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFDKVALSLKKRNNAMDDELERLREVITHYKKQLIELESLQAFQNKVSKEF 60 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G +A+ LK E K +L L K E+ + +S IPN+ E+ P+G S Sbjct: 61 GIKMAQ--KVDASDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGAS 118 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +NI I+ + + +EHFE+ + G +DF+ KL+ +RFSV+ G A + RAL Sbjct: 119 EEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRAL 178 Query: 179 GQFMIDLHTSEH 190 M+D + + Sbjct: 179 IHLMLDFNRKKW 190 >gi|76664652|emb|CAI77651.1| seryl-tRNA synthetase [Lactobacillus reuteri] Length = 82 Score = 97.5 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 3/84 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IRQ P+ L R ++P+ + +++LD+K R L+++ E ++A+RN S +IG Sbjct: 1 MLDIKKIRQEPDFYKEKLATRGVKPEEIDEVIALDKKRRELLQQTETMKAQRNEASKKIG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQ 83 +A G DA ET L ++ Sbjct: 61 EAKRNG--ESADAAIKETRELGDK 82 >gi|167470143|ref|ZP_02334847.1| seryl-tRNA synthetase [Yersinia pestis FV-1] Length = 45 Score = 96.8 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 28/43 (65%), Positives = 33/43 (76%) Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 TLNGSG+AVGR L+A+LENY ADG + +P VLRPYM L I Sbjct: 2 TLNGSGLAVGRTLVAVLENYQQADGRIQVPDVLRPYMGGLEYI 44 >gi|167749735|ref|ZP_02421862.1| hypothetical protein EUBSIR_00702 [Eubacterium siraeum DSM 15702] gi|167657358|gb|EDS01488.1| hypothetical protein EUBSIR_00702 [Eubacterium siraeum DSM 15702] Length = 64 Score = 96.4 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 365 NSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 R + + K F HTLN + VA R LIA LEN L ADGSV IP VLR YM + I Sbjct: 1 KIRVKSKD-KGNYFAHTLNNTVVAPPRMLIAFLENNLCADGSVKIPEVLRKYMGGIDRIV 59 Query: 425 K 425 Sbjct: 60 P 60 >gi|24429894|gb|AAN52758.1| seryl-aminoacyl-tRNA synthetase BLES02 [Rattus norvegicus] Length = 177 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 15/175 (8%) Query: 147 ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAM 206 + + ++ ++G+R L G L LE+AL Q+ + GYT + P +R E M Sbjct: 4 MVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVM 62 Query: 207 YGTGQIPKFADDMFCT------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 Q+ +F ++++ D ++LI TSE + L+ E + + LP+++ Sbjct: 63 QEVAQLSQFDEELYKVIGKGSEKSDDSSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKY 122 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAE 307 + FR E GS GRDTRG+ R HQF K E + S+ + M++ AE Sbjct: 123 AGFSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAE 177 >gi|200970|gb|AAA40108.1| transfer RNA-Ser synthetase [Mus musculus] Length = 283 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 109/282 (38%), Gaps = 43/282 (15%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL+ + S +K E + + E Sbjct: 63 TIGEKMKKKEAVGDDESVPENVLNFDDLTADALRALKVSQIKKVRLLIDEAIQKCDGERV 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+ + G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSPGVLPEGALVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADDMFCT------------TDGRWLIPTSEVSLTNLYSH 242 +F ++++ D ++LI TSE + L+ Sbjct: 241 SQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRD 282 >gi|322804793|emb|CBZ02346.1| seryl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 112 Score = 95.2 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 3/112 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 MLD++++R+NPE + ++K+ + +++LD + R + + +++RA RN S Q Sbjct: 1 MLDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRNIKPEADNLRAMRNKISKQ 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 IG +A+G + LK + + + L LEK E E+ KK Sbjct: 61 IGGLMAQGRKGEAEELKKQITVASDHLAELEKGESELERKNKKNYDYYSKYY 112 >gi|167465658|ref|ZP_02330747.1| seryl-tRNA synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 118 Score = 94.4 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 3/120 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M D++ +R + + A++ R E + + LD K R L+++ E +++ RN S ++ Sbjct: 1 MFDVKLLRTDLPGVQQAMRNRGSEIAELDRFTDLDRKRRELLQETEQLKSTRNKVSQEV- 59 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 AI + N D L E + +++ L++E + + L L+ IPN+P E VP+G S Sbjct: 60 -AIRKKNKENADDLIQEMKIVGDKIKSLDEEIRNLETDLNSLLLSIPNMPHESVPVGMSE 118 >gi|116334986|ref|YP_802481.1| seryl-tRNA synthetase [Candidatus Carsonella ruddii PV] gi|116235267|dbj|BAF35115.1| seryl-tRNA synthetase [Candidatus Carsonella ruddii PV] Length = 336 Score = 94.1 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 19/265 (7%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTS-EHGYTEVSAPLLVRDEAMYGTGQIPK 214 +K++ + L+ + F + S + Y E++ P+ + + +GQ+PK Sbjct: 82 ISKITSSIKYNLSNFFFCCLNKIIDFYLTKILSLKFRYNEINIPVFINYSNLLFSGQLPK 141 Query: 215 FADDMFCTTDGRWL-IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 F + +F + + IPTSEV L +L + ++ + FR E S Sbjct: 142 FYNFLFKIENKKCFLIPTSEVILNSLSFFLKKKINQ--IKIFCNSLCFRKE--SYNLQNS 197 Query: 274 GMLR-QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 + Q+QF K E+ + S M S ILK L++ ++++ + +L + Sbjct: 198 SGFKKQNQFKKIEIYQFINKNISLIVFYNMCSTIFYILKSLNIKFKIIKINNFELNPNTF 257 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 ++D E+++ N + EISS S C + + K++ H +NGS +GR Sbjct: 258 YSFDFEIYI---NNWLEISSLSLCLD------KPFFFYLKKKNM---HIINGSCFPIGRL 305 Query: 393 LIAILENYLNADGSVTIPTVLRPYM 417 ++AIL Y + +P L Y+ Sbjct: 306 VLAILHYYRLNNRIFKVPKKLNKYL 330 >gi|170038967|ref|XP_001847318.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167862596|gb|EDS25979.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 427 Score = 94.1 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 66/401 (16%), Positives = 128/401 (31%), Gaps = 48/401 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD + + E L L+ R + E +++ R + + DI +RR QIG+ Sbjct: 45 LDFKSKLADLEDLRRNLRARRYQLDFEALVNQWNLYRSVELRKRDIESRRLELRNQIGKL 104 Query: 62 IAEGNLSLVDALKNETSTLKEQLPI-LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 V LK E + ++ L E + + IPN E P G S Sbjct: 105 K---EGDEVQQLKVEAAMARDDLKHLKESGYAIADAFVAGQFLGIPNELHELTPEGESGE 161 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + + + + +T A ++ L Sbjct: 162 VLFERTVQRDDVETVG-----------------EDFVEEYDSTCYYMTQDAALMDLFLPM 204 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK------FADDMFCTTDGRWLIPTSEV 234 +L + GY S P VR + + P ++ + L + Sbjct: 205 NCAELF-QDAGYVLFSNPDFVRTVLVEAAREDPNSIYLVNEEVEIENKLNLLHLCGGGSM 263 Query: 235 -SLTNLYSHEIIESKSLPLRFTTLAPSFRSEA-GSAGRDTRGMLRQHQFWKCELVSITRE 292 S + + +LPLR + E ++ T R+ Sbjct: 264 LSFLGYLTKLSVFPTALPLRLVAPGKQYFYEKIQTSAVQTMTATRE------------AP 311 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISS 352 E + + + + + YR+V + L + D++V+ + + +++ Sbjct: 312 EAIE-IFDETIELYKRFYGQFQMSYRLVRVPAHLLAPAESMRVDVQVYSPKEQDFVKVAD 370 Query: 353 CSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 + +F S+R + K+ KF H + SG A+ R + Sbjct: 371 VAYYSDFISKR--IAFNYHEGKTQKFPHMV--SGCAL-RAI 406 >gi|270005871|gb|EFA02319.1| hypothetical protein TcasGA2_TC007985 [Tribolium castaneum] Length = 495 Score = 93.3 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 128/376 (34%), Gaps = 38/376 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILS-------LDEKNRILIKKIEDIRARRNSNS 55 D I +N L +++ R L + I +D+ +L +I+ N Sbjct: 38 DFDEILKNKNDLIKSIEARKLTINLDKIEQRWNFFKTIDDHKTVLEFTRSEIQNLINKL- 96 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 Q G+ N S ++ L +K+ L +++ + + + + +PN + P+ Sbjct: 97 KQDGEEK---NQSDIEKLLLHIKVVKDDLKNVKEFTYGLEENANLGVLSLPNFLHPKTPL 153 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 + + L + L + + + L A E Sbjct: 154 DSQTIIHE------------FLEQPKPIQENHLQIAKSQNLIEYTSPTLCYLKSDAALFE 201 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------CTTDGRWLI 229 A+ + + +T+ S VR + G G + +F + L+ Sbjct: 202 FAITNY-FQSNLVSQSFTQFSNADFVRSLVVEGCGTDYLDKNKIFTLDGSNNEINRLHLV 260 Query: 230 PTSEV-SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 + + S ++ I+S LPL+F TL + GS + Sbjct: 261 GGASLYSFMAYFAKNSIQSALLPLKFFTLGRKY--SPGSGPDLLNLSQ-----NTVGQIF 313 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + +S + ++ EI + L+ H+R+V DL +E++ Y Sbjct: 314 VATSNNSNEIFDSLVQQIREIYEPLNYHFRLVYAPAVDLKVGESLKVSIEMFSNYSGTYV 373 Query: 349 EISSCSTCGNFQSRRM 364 E+ S G++ S+R+ Sbjct: 374 EVGYLSLYGDYISKRL 389 >gi|91287|pir||A41019 serine-tRNA ligase (EC 6.1.1.11) - mouse (fragment) Length = 284 Score = 92.5 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 107/283 (37%), Gaps = 44/283 (15%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL+ + S +K E + + E Sbjct: 63 TIGEKMKKKEAVGDDESVPENVLNFDDLTADALRALKVSQIKKVRLLIDEAIQKCDGERV 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + + + + + H ++ + + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKK-YSHVDLVVMVDGFE 181 Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 ++ ++G+ + G L LE+AL Q+ + GYT + P +R E M Q+ Sbjct: 182 GEKGAVVAGSPGVLPEGALVFLEQALIQYALRT-LGSRGYTPIYTPFFMRKEVMQEVAQL 240 Query: 213 PKFADD-------------MFCTTDGRWLIPTSEVSLTNLYSH 242 + D+ + D ++LI TSE + L+ Sbjct: 241 SQQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRD 283 >gi|309365642|emb|CAP22949.2| hypothetical protein CBG_01672 [Caenorhabditis briggsae AF16] Length = 365 Score = 92.1 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 15/117 (12%) Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY---REISSCSTCGNFQSRR 363 +R + + + +LG + + L+ + ++ + E+SS S C +FQ+RR Sbjct: 2 CLNCHLELCIFRQLEMPSEELGMPSEERLLLKNSI-SKHAWQETGEVSSASNCTDFQARR 60 Query: 364 MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN----------ADGSVTIP 410 + +Y+ + + K+ HT NG+ + R LI++LE + N + V IP Sbjct: 61 LGIKYKTADG-TTKYVHTCNGTALPSTRTLISVLETFQNVSVLKVGRHEKNNVVEIP 116 >gi|157114643|ref|XP_001652351.1| hypothetical protein AaeL_AAEL006938 [Aedes aegypti] gi|108877170|gb|EAT41395.1| conserved hypothetical protein [Aedes aegypti] Length = 417 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 66/409 (16%), Positives = 122/409 (29%), Gaps = 49/409 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD Q + E L LK R + E + + R + + DI ARR +I ++ Sbjct: 37 LDFQSKLSDLEKLQQNLKLRRYQLDFEQLKHQWDLYRSMELRKRDIEARRVELKEKISKS 96 Query: 62 IAEGNLSLVDALKNETSTLKEQLPI-LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + LK + + ++ L E + IPN E P Sbjct: 97 KCE---DEIKQLKMQATLARDDLKNLKESSYAVADKFVAGTFLAIPNELHERTPAEHEQM 153 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + S P K F + Sbjct: 154 LHERSSSRKASPIGEEW------------------LEKYDSTSFYMTEDAALMDLFLPMN 195 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK------FADDMFCTTDGRWLIPTSEV 234 G+ S P R + + P D+ + L + Sbjct: 196 CA--GVLQGAGFVLFSNPDFARSVLVEASRVDPNSIYLVNEEVDLEHKLNLLHLCGGGSM 253 Query: 235 -SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR-- 291 S + + +LPLR + + + Q +++ TR Sbjct: 254 LSFLGYLTKLSVFPTALPLRLVAIGKQY-------------FYDKTQTSAVQMLGATRQG 300 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 E + + ++ R++L YR+V + L S D+EV+ ++ + Sbjct: 301 PEAV-QIFDETVELYKKFYDRMELSYRLVQVPAHRLEASEAMRVDVEVYSPRSKIFMAVG 359 Query: 352 SCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + +F S+R + K KF H ++G+ + + +L+N Sbjct: 360 NVCYYSDFISKR--IAFNYHEGKVQKFPHLVSGTVLKAANLIEVLLQNG 406 >gi|289809867|ref|ZP_06540496.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 43 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 26/41 (63%), Positives = 32/41 (78%) Query: 383 NGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 NGSG+AVGR L+A++ENY ADG + +P VLRPYMN L I Sbjct: 2 NGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYI 42 >gi|157108604|ref|XP_001650306.1| hypothetical protein AaeL_AAEL005050 [Aedes aegypti] gi|108879271|gb|EAT43496.1| conserved hypothetical protein [Aedes aegypti] Length = 740 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 63/407 (15%), Positives = 118/407 (28%), Gaps = 45/407 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD Q + E L LK R + E + + + R + + DI ARR QI ++ Sbjct: 360 LDFQSKLSDLEKLQRNLKLRRYQLDFEQLKNQWDLYRSMELRKRDIEARRVELKEQINKS 419 Query: 62 IAEGNLSLVDALKNETSTLKEQLPI-LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E + LK + + ++ L E + IPN E P Sbjct: 420 KCE---DEIKQLKMQATLARDDLKNLKESSYVVADKFVAGTFLAIPNELHERTPAEHEQV 476 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + S P K F + Sbjct: 477 LHERSSSRNASPIGEEW------------------LEKYDSTSFYMTGDAALMDLFLPMN 518 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK------FADDMFCTTDGRWLIPTSEV 234 + G+ S P R + P D+ + L + Sbjct: 519 CA--GVLQDAGFVLFSNPDFARSVLVEAARVDPNSIYLINEEVDLEHKLNLLHLCGGGSM 576 Query: 235 -SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 S + + +LPLR + + + Q ++ Sbjct: 577 LSFLGYLTKLSVFPTALPLRLVAIGKQYFYDKTQTSAVQMLGASQQGPEAVQIF------ 630 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 + + ++ +++L YR+V + L S D+EV+ + + + Sbjct: 631 ------DETVELYKKFYDQMELSYRLVQVPAHRLEASEAMRVDVEVYSPRSKNFMAVGNV 684 Query: 354 STCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 +F S+R + K KF H ++G+ + + +L+N Sbjct: 685 CYYSDFISKR--IAFNYHEGKVQKFPHLVSGTVLKAANLIEVLLQNG 729 >gi|68010689|ref|XP_670847.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56486477|emb|CAH94430.1| hypothetical protein PB000583.00.0 [Plasmodium berghei] Length = 117 Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 39/115 (33%) Query: 348 REISSCSTCGNFQSRRMNSRY-------------RDPNSKSLK----------------- 377 RE+ SCS C ++QS +N +D N ++ K Sbjct: 1 RELVSCSNCTDYQSINLNIEIDSNMKISGITKSSKDKNEENTKDETRDEYVDSEYEKFNH 60 Query: 378 --------FTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 + H LNG+ VA R L +LENY N +G + +P LRPYMNN I Sbjct: 61 DFPIENKNYVHLLNGTMVAGQRFLCCLLENYQNGEG-IIVPEKLRPYMNNTDFIP 114 >gi|268552271|ref|XP_002634118.1| Hypothetical protein CBG01672 [Caenorhabditis briggsae] Length = 234 Score = 90.6 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 E+SS S C +FQ+RR+ +Y+ + + K+ HT NG+ + R LI++LE + N Sbjct: 29 GEVSSASNCTDFQARRLGIKYKTADG-TTKYVHTCNGTALPSTRTLISVLETFQN 82 >gi|255557767|ref|XP_002519913.1| seryl-tRNA synthetase, putative [Ricinus communis] gi|223540959|gb|EEF42517.1| seryl-tRNA synthetase, putative [Ricinus communis] Length = 111 Score = 89.8 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 32/127 (25%) Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 E M+ +EE K L YRVV++ +G L +A YDLE C Sbjct: 1 MLEEMIINSEEFYKELKTPYRVVAIVSGALNDAAATKYDLEA----------------C- 43 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 N ++ ++ H LN A R L +LENY +G V IP LR YM Sbjct: 44 --------------NEQAKQYVHLLNSPLTATERTLCCVLENYQTENG-VEIPEPLRVYM 88 Query: 418 NNLAVIK 424 + + Sbjct: 89 GGQSSLP 95 >gi|242040315|ref|XP_002467552.1| hypothetical protein SORBIDRAFT_01g030083 [Sorghum bicolor] gi|241921406|gb|EER94550.1| hypothetical protein SORBIDRAFT_01g030083 [Sorghum bicolor] Length = 65 Score = 89.0 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 371 PNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEH 427 + +F H LN + A R L ILEN G V +P VL+PYM + + + Sbjct: 2 DEQSNNRFVHMLNSTLTATERTLCCILENNQKE-GGVEVPKVLQPYMGGIEFLPFKQ 57 >gi|313235956|emb|CBY25100.1| unnamed protein product [Oikopleura dioica] Length = 775 Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 74/421 (17%), Positives = 140/421 (33%), Gaps = 52/421 (12%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIED---IRARRNSNSA---QIGQAIAEGNLSLVDA 72 K+ L + + R +K ++ + A + + ++ + A +L Sbjct: 326 AKKSLLEDIKVAKRATDLWRSEQEKFDEKFSLEAEKKCVAKGHEELKKFKAAKRTAL--- 382 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 LK + ++ L K IPN + + + +S KK Sbjct: 383 --ENVKQLKNESNKCLLKKQHGEYILFKDALAIPNAISSQTKKRSVTLKTSNTKSSLKK- 439 Query: 133 SAIHLSREHFEIGEALGLMDFD---RATKLSGARFSVLTGHLAHLERALGQFMIDL--HT 187 H + L D + + + ++ + G LA AL + + + Sbjct: 440 --------HLTAEQLKNLFDQELIINSNQNDTSKSLIYYGQLAVFFNALENCIRNFLFKS 491 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIES 247 + Y P L EA G Q ++ S E E Sbjct: 492 GQLEYVSCKDPGLFVKEAFCGMLQNNTSENNDAVCHL---------HSALVSRKFEYFEG 542 Query: 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAE 307 K FT + +F + +R S +S E Sbjct: 543 KQTHHMFTDFNRK--------------DQKSTEFPFVSISRTSR--QSEKAFFANVSAIE 586 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 IL + YR+V +L FS+ +T ++EV L+ ++ + +F + R+ Sbjct: 587 NILSSFQIDYRLVESGIVNLPFSSMRTINVEVRSPSTGLWHSFANVNLRDDFIASRLGIF 646 Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL--NADGSVTIPTVLRPYMNNLAVIKK 425 Y D L+F ++ +GS + G + +LE + N G++TIP L+P+ + I Sbjct: 647 YEDDRKDELRFCYSCDGSFASTGVLMNVLLEKHQKDNEQGTITIPAQLQPFFMGKSQISA 706 Query: 426 E 426 + Sbjct: 707 K 707 >gi|126642758|ref|YP_001085742.1| seryl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] gi|126388642|gb|ABO13140.1| seryl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] Length = 71 Score = 87.5 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D + +R N E ++ AL KR ++ + SL+ + + L K E ++A RN+ + Q+GQ Sbjct: 3 MIDPKLLRNNIEVVNAALAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ 62 Query: 61 AIAEG 65 G Sbjct: 63 IKKSG 67 >gi|94502353|ref|ZP_01308821.1| seryl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|94451092|gb|EAT14049.1| seryl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] Length = 268 Score = 87.1 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 11/250 (4%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 YIL L +K + + K++++ S +I + + ++N +S LKE+L I Sbjct: 29 INYILFLYKKKKKIKSKLDNLIYYIKFFSKKI--------KNNEELIRNYSSFLKEKLKI 80 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 ++ + + ++I IPN+P EEV + ++ + H+E+GE Sbjct: 81 NIFFIKKIKNKIFEIIIKIPNLPFEEVQKEKNFFYKEILYKREIINNYKKKIY-HWELGE 139 Query: 147 ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAM 206 L + +SG F+V A L+R+L QF ++ + S GY E P +V ++ Sbjct: 140 KFKLFSTKKGAIISGNGFNVFFNKGALLQRSLIQFFLEKNISS-GYIEYVLPYIVNINSV 198 Query: 207 YGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 YGTGQIP M+ D +LIPT EV L N++ I + LP++ TT FR E+ Sbjct: 199 YGTGQIPDKKYQMYNINYDNLYLIPTGEVPLINIFKKTIFKESELPVKATTYTSCFRRES 258 Query: 266 GSAGRDTRGM 275 GS G RG+ Sbjct: 259 GSYGSKVRGL 268 >gi|89476373|gb|ABD73687.1| SerS [Staphylococcus aureus] gi|89476375|gb|ABD73688.1| SerS [Staphylococcus aureus] gi|89476377|gb|ABD73689.1| SerS [Staphylococcus aureus] gi|89476379|gb|ABD73690.1| SerS [Staphylococcus aureus] gi|89476381|gb|ABD73691.1| SerS [Staphylococcus aureus] gi|89476383|gb|ABD73692.1| SerS [Staphylococcus aureus] gi|89476385|gb|ABD73693.1| SerS [Staphylococcus aureus] gi|89476387|gb|ABD73694.1| SerS [Staphylococcus aureus] gi|89476389|gb|ABD73695.1| SerS [Staphylococcus aureus] gi|89476391|gb|ABD73696.1| SerS [Staphylococcus aureus] gi|89476393|gb|ABD73697.1| SerS [Staphylococcus aureus] gi|89476395|gb|ABD73698.1| SerS [Staphylococcus aureus] gi|89476397|gb|ABD73699.1| SerS [Staphylococcus aureus] gi|89476399|gb|ABD73700.1| SerS [Staphylococcus aureus] gi|89476401|gb|ABD73701.1| SerS [Staphylococcus aureus] gi|89476403|gb|ABD73702.1| SerS [Staphylococcus aureus] gi|89476405|gb|ABD73703.1| SerS [Staphylococcus aureus] gi|89476407|gb|ABD73704.1| SerS [Staphylococcus aureus] gi|89476409|gb|ABD73705.1| SerS [Staphylococcus aureus] gi|89476411|gb|ABD73706.1| SerS [Staphylococcus aureus] gi|89476413|gb|ABD73707.1| SerS [Staphylococcus aureus] gi|89476415|gb|ABD73708.1| SerS [Staphylococcus aureus] gi|89476417|gb|ABD73709.1| SerS [Staphylococcus aureus] gi|89476419|gb|ABD73710.1| SerS [Staphylococcus aureus] gi|89476421|gb|ABD73711.1| SerS [Staphylococcus aureus] gi|89476423|gb|ABD73712.1| SerS [Staphylococcus aureus] gi|89476425|gb|ABD73713.1| SerS [Staphylococcus aureus] gi|89476427|gb|ABD73714.1| SerS [Staphylococcus aureus] gi|89476429|gb|ABD73715.1| SerS [Staphylococcus aureus] Length = 151 Score = 86.7 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 69/150 (46%), Positives = 94/150 (62%), Gaps = 1/150 (0%) Query: 105 IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 IPN+ ++VP G S +N+ ++ G + H++I E L + DFDRA K+SGARF Sbjct: 2 IPNLISDDVPQGESDEDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSGARF 61 Query: 165 SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD 224 LT A LERAL +MI HT++HGYTE+ P LV + MYGTGQ+PKF +D+F Sbjct: 62 VYLTNEGAQLERALMNYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEK 121 Query: 225 G-RWLIPTSEVSLTNLYSHEIIESKSLPLR 253 + IPT+EV LTN Y +EII+ LP + Sbjct: 122 EGLYTIPTAEVPLTNFYRNEIIQPGVLPEK 151 >gi|218672608|ref|ZP_03522277.1| seryl-tRNA synthetase [Rhizobium etli GR56] Length = 59 Score = 86.7 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 30/59 (50%), Positives = 43/59 (72%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+WIR+N E LD AL KR EP ++ +++LDEK R ++K +D+ +RRN S +IG Sbjct: 1 MLDIKWIRENAEALDAALAKRGAEPLAQSLIALDEKRRSAVQKAQDLLSRRNLASKEIG 59 >gi|331010749|gb|EGH90805.1| seryl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 68 Score = 83.7 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + +R + + L R I SL+ + +++ + E ++A RN+ S IGQ Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKVVQTRTEQLQAERNARSKSIGQ 60 Query: 61 AIAEGNL 67 A G Sbjct: 61 AKQRGED 67 >gi|258563462|ref|XP_002582476.1| predicted protein [Uncinocarpus reesii 1704] gi|237907983|gb|EEP82384.1| predicted protein [Uncinocarpus reesii 1704] Length = 279 Score = 82.9 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 86/229 (37%), Gaps = 14/229 (6%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +I+ IR + R+ +E I SL ++ L + + R++ I Sbjct: 40 NIKHIRDHAGLYAQNCLDRNYTALAEYPSRIQSLADEAARLQRSLNAPRSKIKHVQKAIA 99 Query: 60 QAIAEG------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 + + AL E LK+ L +++L +PN+ E Sbjct: 100 RLATSKEEQDNYKNEALAALHREAKQLKDASQALTDRREACLQQIQQLALALPNLTAPET 159 Query: 114 PIGTSANENILIRSVGKKP----SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 P+G + I P S+ +R H IG ALGL+DF A +G + LT Sbjct: 160 PVGDTPRVRDYINYNPHSPPPYVSSPEPARNHVAIGTALGLLDFASAATSTGWGWYYLTN 219 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 A LE+AL Q+ + G+ V+ P LV G P+ A Sbjct: 220 EGALLEQALVQYAL-RVAMRRGWKPVAPPSLVYSYIAEACGFQPRDAQQ 267 >gi|76155221|gb|AAX26475.2| SJCHGC08432 protein [Schistosoma japonicum] Length = 231 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 85/232 (36%), Gaps = 34/232 (14%) Query: 2 LDIQWIRQN----PEHLDIALKKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + P+ + KR + ++ DE R + + + +N S Sbjct: 3 LDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLCSK 62 Query: 57 QIGQAIAEGNLSL--------------------------VDALKNETSTLKEQLPILEKE 90 I + I + S + LK+ + + E++ Sbjct: 63 AIAKRIKDNEDSPDCEITIFKGVLERLDSLADVDLQPLSIAQLKSLSCFIDEEIKTNAAS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 E+ S + + I N+ +VPI +N++IR+ S H ++ + Sbjct: 123 LIELESIRQHHLYEIGNLLHPDVPISKDEEDNLIIRTF--GKSDFRKPLSHVDLVVMVDG 180 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 D +R + ++G R L G L LE+A+ + E GYT + P +R Sbjct: 181 FDGERGSMVAGGRGYFLKGPLVFLEQAIINLAL-RMLDERGYTTLYTPFFMR 231 >gi|169839028|ref|ZP_02872216.1| seryl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 91 Score = 82.1 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 4/90 (4%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLDI +IR N +H+ + + + +L +D+ R L KK++ +R RN +A++ Q Sbjct: 1 MLDINYIRDNADHVQKSAENKGYNLSIAELLQIDDNRRELQKKVDALRTERNLIAAEVKQ 60 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKE 90 ++ + + L K +L LE E Sbjct: 61 SLGK----PSEELLARGKHSKSELANLEAE 86 >gi|213023158|ref|ZP_03337605.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 62 Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 31/56 (55%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 MLD +R P+ + L +R + + + +L+E+ ++L E+++A RNS S Sbjct: 7 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSK 62 >gi|224538467|ref|ZP_03679006.1| hypothetical protein BACCELL_03361 [Bacteroides cellulosilyticus DSM 14838] gi|224519908|gb|EEF89013.1| hypothetical protein BACCELL_03361 [Bacteroides cellulosilyticus DSM 14838] Length = 90 Score = 80.6 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML I+ I +N + + L+K+H + + +++ ++K R +++ + NS S Sbjct: 1 MLTIKQITENTDAVIRGLEKKHFKNAKETIDQVIAFNDKRRSTQSILDNNLSEVNSISKS 60 Query: 58 IGQAIAEGNLSLVDALKNETSTLKE 82 IGQ + EG + K+ + LKE Sbjct: 61 IGQLMKEGKKEEAETAKSRVAELKE 85 >gi|309808548|ref|ZP_07702445.1| serine--tRNA ligase N-terminal domain protein [Lactobacillus iners LactinV 01V1-a] gi|308168198|gb|EFO70319.1| serine--tRNA ligase N-terminal domain protein [Lactobacillus iners LactinV 01V1-a] Length = 65 Score = 80.2 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLDI+ IR+N + L R ++P+ + ++++D K R ++ K E ++ +RN SAQI Sbjct: 1 MLDIKVIRENLDWAKKKLATRGIKPEELDELVAIDVKRREVLTKTETLKNKRNEVSAQIA 60 Query: 60 QAIAE 64 QA + Sbjct: 61 QAKEK 65 >gi|154148558|ref|YP_001406332.1| seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) [Campylobacter hominis ATCC BAA-381] gi|153804567|gb|ABS51574.1| seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) [Campylobacter hominis ATCC BAA-381] Length = 155 Score = 80.2 bits (196), Expect = 7e-13, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 78/150 (52%), Gaps = 3/150 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 M++++ I N + + L + + + + +L++ + ++E+++A +N+ S ++G Sbjct: 1 MINLKLIETNFDEFNKKLIAKKVSKEALKELLAVYNDLKAKKLELENLQALQNTKSKEVG 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 I N + LK+E K+ + L++ + + +L + S IPN+ ++VP G Sbjct: 61 --IKARNGEDITELKSELEENKQNIQKLQEIVNSIQENLDQKASHIPNIIDDDVPFGEDE 118 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALG 149 NEN+ ++ V + P+ + H+E+GE Sbjct: 119 NENVELKKVLEVPNFTFTPKPHYELGEKNN 148 >gi|207111717|ref|ZP_03245879.1| seryl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 39 Score = 79.8 bits (195), Expect = 9e-13, Method: Composition-based stats. Identities = 20/39 (51%), Positives = 28/39 (71%) Query: 377 KFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 + HTLNGS +AVGR ++A++EN+ ADGS+ IP L Sbjct: 1 QLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEK 39 >gi|219885137|gb|ACL52943.1| unknown [Zea mays] Length = 81 Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R NP+ + + R + + +++LD+ R +++ IR N+ S Sbjct: 1 MLDINLFRTDKGGNPDLIHESQCSRFASVELVDEVIALDKAWRERQFELDKIRQELNATS 60 Query: 56 AQIGQAIAEGNLSLVDALKN 75 +I + A L Sbjct: 61 KKIDKLKASKQEEEAKKLME 80 >gi|5669859|gb|AAD46489.1|AF130465_5 seryl-tRNA synthetase [Streptococcus salivarius] Length = 81 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD++ IR + + L L R + + + LD K R L+ K E+++A+RN S I Sbjct: 1 MLDVKRIRNDFDALAEKLATRGVAAETLNELKELDVKRRELLIKSEELKAQRNIASDGIA 60 Query: 60 QAIAEGNLS 68 QA + Sbjct: 61 QAKRNKEDA 69 >gi|213028560|ref|ZP_03343007.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 36 Score = 77.9 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 21/35 (60%), Positives = 26/35 (74%) Query: 389 VGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVI 423 VGR L+A++ENY ADG + +P VLRPYMN L I Sbjct: 1 VGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYI 35 >gi|213028230|ref|ZP_03342677.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 45 Score = 74.4 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 24/42 (57%), Positives = 29/42 (69%) Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSG 386 N YREISSCS +FQ+RRM +R R + K + HTLNGSG Sbjct: 4 NTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSG 45 >gi|320540968|ref|ZP_08040438.1| putative seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Serratia symbiotica str. Tucson] gi|320028969|gb|EFW11178.1| putative seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine [Serratia symbiotica str. Tucson] Length = 45 Score = 74.4 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 20/33 (60%), Positives = 25/33 (75%) Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418 G+AVGR L+A+LENY ADG + +P VLR YM Sbjct: 1 GLAVGRTLVAVLENYQQADGRIQVPEVLRSYMG 33 >gi|213421977|ref|ZP_03355043.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 81 Score = 73.6 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 37/63 (58%), Positives = 44/63 (69%) Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 LIPT+EV LTNL EII+ LP++ T P FRSEAGS GRDTRG++R HQF K Sbjct: 19 NYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKV 78 Query: 285 ELV 287 E+V Sbjct: 79 EMV 81 >gi|195658983|gb|ACG48959.1| hypothetical protein [Zea mays] Length = 118 Score = 72.9 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%) Query: 1 MLDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLDI R NP+ + + R + + +++LD+ R +++ IR N+ S Sbjct: 1 MLDINLFRTDKGGNPDLIHESQCSRFTSVELVDEVIALDKAWRERQFELDKIRQELNATS 60 Query: 56 AQIGQAIAEGNL 67 +I + A N Sbjct: 61 KKIDKLKAANNK 72 >gi|255545804|ref|XP_002513962.1| L-ascorbate peroxidase, putative [Ricinus communis] gi|223547048|gb|EEF48545.1| L-ascorbate peroxidase, putative [Ricinus communis] Length = 388 Score = 72.9 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 3/90 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +D +W R N E + + +K R E +L L EK + K++E +R RN+ + + Sbjct: 35 IDFKWTRDNKEEVALNIKNRISNANLELVLELYEKMLAVQKEVERLRGERNAVA---NKM 91 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEE 91 + S L NE LKE L LE++ Sbjct: 92 KGKLEPSERQKLINEGKNLKEGLMTLEEDM 121 >gi|195576221|ref|XP_002077975.1| GD22784 [Drosophila simulans] gi|194189984|gb|EDX03560.1| GD22784 [Drosophila simulans] Length = 85 Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Query: 376 LKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417 + + H LN + A R + AILE + G + +P L+ YM Sbjct: 5 VDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKKYM 45 >gi|146319437|ref|YP_001199149.1| seryl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|145690243|gb|ABP90749.1| Seryl-tRNA synthetase [Streptococcus suis 05ZYH33] Length = 37 Score = 71.7 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 21/29 (72%), Positives = 22/29 (75%) Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVIKK 425 LENY N DGSVTIP VLRPYM + VIK Sbjct: 9 LENYQNEDGSVTIPEVLRPYMGGVEVIKP 37 >gi|2253629|gb|AAB63028.1| seryl-tRNA synthetase [Sulfolobus solfataricus P2] Length = 100 Score = 71.7 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ +R+NPE L LK+R ++ + + LD+K R +++++E +R + N S+QI + Sbjct: 6 LELLRKNPEDLKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVEKLRHQHNVLSSQISKLS 65 Query: 63 AEGNLSLVDALKN 75 E ++ KN Sbjct: 66 GEERKKKIEESKN 78 >gi|497649|gb|AAA57073.1| seryl-tRNA synthetase [Mycoplasma genitalium] Length = 125 Score = 71.3 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 7/120 (5%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 MLD +R N + L +R++ Q + D+ R ++++E +++ + Q+ Sbjct: 1 MLDPNKLRNNYDFFKKKLLERNVNEQLLNQFIQTDKLMRKNLQQLELANQKQSLLAKQVA 60 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + L E+ LK+++ L + + + L+ PN+ E VP+G + Sbjct: 61 KQKDNKK------LLAESKELKQKIENLNNAYKDSQNISQDLLLNFPNIAHESVPVGKNE 114 >gi|296419357|ref|XP_002839279.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635398|emb|CAZ83470.1| unnamed protein product [Tuber melanosporum] Length = 90 Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 3/60 (5%) Query: 362 RRMNSRY--RDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 R RY + ++ H LN + R L +LENY + + +P LR Y+ Sbjct: 7 RNPEIRYGTNSQSDTVKEYVHCLNSTLCTTERSLCYLLENYQTPE-YINVPEPLRKYIPG 65 >gi|62422070|gb|AAX82617.1| putative seryl-tRNA synthetase [Lactobacillus reuteri] Length = 55 Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSN 54 MLDI+ IRQ P+ L R ++ + + +++LD+K R L+++ E ++A+RN Sbjct: 1 MLDIKKIRQEPDFYKEKLATRGVKSEEIDEVIALDKKRRELLQQTETMKAQRNEA 55 >gi|328947096|ref|YP_004364433.1| threonyl-tRNA synthetase [Treponema succinifaciens DSM 2489] gi|328447420|gb|AEB13136.1| threonyl-tRNA synthetase [Treponema succinifaciens DSM 2489] Length = 585 Score = 70.2 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 61/431 (14%), Positives = 136/431 (31%), Gaps = 60/431 (13%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + +E S++++ R +I D R S + + + + L E Sbjct: 50 GHKVCAEDFASIEKEMRKIISGNHDFI--RKEVSKSEALELFK-DQPYKEELIKELPE-G 105 Query: 82 EQLPILEKEEH-------EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E + E++ + V ++ + + + +L R Sbjct: 106 EVITTYEQDGYLDLCRGPHVANTKEINQQSFKLMSIAGAYWKGDVKRPMLTRIYAVCFYK 165 Query: 135 IHLSREHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 + +++ + E D D + Q + Sbjct: 166 PNDLKDYITMLEEADKRDHRKLGVQLDLFHLDPEDPGQIFWHPNGWTMYVTLQDYMREKI 225 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV---SLTNLYSHEI 244 + GY EV+ P ++ +G + +MF T + + + +++ + Sbjct: 226 RKDGYMEVNTPAIMPRSLWERSGHWGHYQKNMFVTESEKRMFAIKPMNCPGALEIFNSRV 285 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 K LPLR R+E G++R F + + I E+ +E + Sbjct: 286 RSYKDLPLRLAEFGHCVRNEPSG---TLHGIMRVRGFVQDDAHIICTEDQIESEVSKFCR 342 Query: 305 CAEEILKRLDLHYR-------VVSLCTGDLG---------FSACKTYDLEVWL-AGQNLY 347 ++ K + GDL +ACK+ +E + G+ + Sbjct: 343 LLLDVYKDFGFDKNLLVKLSTMPEDHVGDLETWQHAEKALAAACKSAGMEYEIQPGEGAF 402 Query: 348 ----REISSCSTCG----------NFQ---SRRMNSRYRDPNSKSLKFTHTLNGSGV-AV 389 E + G ++Q + R+N+ Y +++ L+ + + ++ Sbjct: 403 YGPKLEFTLIDALGRQWQCGTIQLDYQLPSAERLNAEYIGADNQKHHPV-MLHRAVLGSL 461 Query: 390 GRCLIAILENY 400 R L ++ENY Sbjct: 462 ERFLGILIENY 472 >gi|223886813|gb|ACN23019.1| seryl-tRNA synthetase [Streptococcus vestibularis ATCC 49124] Length = 58 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD++ IR + + L L R + + + LD K R L+ K E+++A+RN S Sbjct: 1 MLDVKRIRNDFDALSEKLATRGVVAETLNELKELDVKRRELLIKSEELKAQRNIAS 56 >gi|42526600|ref|NP_971698.1| threonyl-tRNA synthetase [Treponema denticola ATCC 35405] gi|73919840|sp|Q73NR2|SYT_TREDE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|41816793|gb|AAS11579.1| threonyl-tRNA synthetase [Treponema denticola ATCC 35405] Length = 585 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 92/307 (29%), Gaps = 20/307 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK-----NETS 78 ++ + +++++ R ++ + S + + + ++ +K E S Sbjct: 54 PINNDDLPAIEKEMRKILTTRSNFEKE--VISREKALEMFKDQPFKIELIKGLPADEEIS 111 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 K VCS + + +L R G + Sbjct: 112 IYKSGEFTDLCRGPHVCSMADINAQGFKLMKIAGAYWRGDETRPMLTRIYGTAWEKPNDL 171 Query: 139 REHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 +E+ + E D R K + Q + E G Sbjct: 172 KEYLAMLEEAEKRDHRRIGKAMNLFHIDEENPGQIFWHPKGWTLYLTIQNYVRKRIKEDG 231 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESK 248 Y EV P ++ +G K+ ++MF T + L ++ ++ I K Sbjct: 232 YLEVHTPFVMPRSLWERSGHWAKYKENMFITESEKRLFALKPMNCPGHVEIFKQGIKSYK 291 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LPLR R+E + G++R F + + EE +E + + + Sbjct: 292 DLPLRLAEFGSCTRNEPSGSLH---GIMRIRGFVQDDAHIFCTEEQISSEVSKFCALLKR 348 Query: 309 ILKRLDL 315 + Sbjct: 349 MYADFGF 355 >gi|195576223|ref|XP_002077976.1| GD22783 [Drosophila simulans] gi|194189985|gb|EDX03561.1| GD22783 [Drosophila simulans] Length = 175 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 52/162 (32%), Gaps = 12/162 (7%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R NP+ + KKR + E +++ D + R + +++ +N S Sbjct: 3 LDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVCSK 62 Query: 57 QIGQAIAEGNL--SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 IG+ + + ++ + L + + + E + I + + + + Sbjct: 63 VIGEKMKKKEPVGAMSEDLPADVTK-----DLTEIVAETLQPLTVNQIKQLRVLIDDAMT 117 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRA 156 + E + E + +R Sbjct: 118 ENQKSLELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERT 159 >gi|325473136|gb|EGC76332.1| threonyl-tRNA synthetase [Treponema denticola F0402] Length = 585 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 92/307 (29%), Gaps = 20/307 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK-----NETS 78 ++ + +++++ R ++ + S + + + ++ +K E S Sbjct: 54 PINNDDLPAIEKEMRKILTTRSNFEKE--VISREKALEMFKDQPFKIELIKDLPADEEIS 111 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 K VCS + + +L R G + Sbjct: 112 IYKSGEFTDLCRGPHVCSMADINAQGFKLMKIAGAYWRGDETRPMLTRIYGTAWEKPNDL 171 Query: 139 REHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 +E+ + E D + K V Q + E G Sbjct: 172 KEYLAMLEEAEKRDHRKVGKAMNLFHIDEENPGQVFWHPKGWTLYLTIQNYVRKRIKEDG 231 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESK 248 Y EV P ++ +G K+ ++MF T + L ++ ++ I K Sbjct: 232 YLEVHTPFVMPRSLWERSGHWAKYKENMFITESEKRLFALKPMNCPGHVEIFKQGIKSYK 291 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LPLR R+E + G++R F + + EE +E + + + Sbjct: 292 DLPLRLAEFGSCTRNEPSGSLH---GIMRIRGFVQDDAHIFCTEEQISSEVSKFCALLKR 348 Query: 309 ILKRLDL 315 + Sbjct: 349 MYADFGF 355 >gi|321458826|gb|EFX69888.1| hypothetical protein DAPPUDRAFT_300668 [Daphnia pulex] Length = 357 Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 63/376 (16%), Positives = 129/376 (34%), Gaps = 36/376 (9%) Query: 39 ILIKKIEDIRARRNSNS---AQIGQAIAEG-NLSLVDALKNETSTLKEQLPILEKEEHEV 94 L + ED+ RR + Q+ A+ + ++ +K E L+ QL L K +V Sbjct: 3 ELRLQREDLETRRIEVTQLMKQVASHTADTTRPNKIEEVKQEGIRLRTQLKELTKVWWDV 62 Query: 95 CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFD 154 + +PN E PI S I P + H + ++ Sbjct: 63 EETAVTRALSLPNSLHSETPIEDSRELYSFI-----PPKSAHSPSDSTKLDVKF------ 111 Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG---Q 211 + G A LE GY +S P VR + G G Sbjct: 112 ---VSHSPTAFYMRGLSARLELN-WMRNFSNDWISKGYNLISPPDFVRSLIVDGCGLDFN 167 Query: 212 IPKFADDMFCTTDG--------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 P+ + D L+ S + + + + +PLR + ++ Sbjct: 168 NPQKVLSLATVPDHGSLEKGNGFHLVGGSSLPAMVAFLTKNAIEEPIPLRLASAGRTYHP 227 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 S D + ++ + F E R+ L++LD+++R++++ Sbjct: 228 PTESNHEDLTNTTQASSIHLLTVMKNC-PDAMFKEVVRVQETISMQLQKLDVNFRIIAVP 286 Query: 324 TGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLN 383 L +E++ + + ++++ S G++ SRR++ + ++ + Sbjct: 287 ARQLESWEQYRSSVELFSSSSKKFIQVANISIIGDYISRRLSIY-----GPNKEWPGFVT 341 Query: 384 GSGVAVGRCLIAILEN 399 ++V + L L+N Sbjct: 342 SQALSVPKLLYCYLKN 357 >gi|41814884|gb|AAS10489.1| seryl tRNA synthetase [Deinococcus proteolyticus MRP] Length = 76 Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 32/76 (42%), Positives = 42/76 (55%) Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 H+F K E I R ED E++L+ AE IL+ L+L YRVV TGD+G D+E Sbjct: 1 HEFRKVEQYVICRPEDGMAWFEKLLANAEGILQALELPYRVVQNSTGDMGLGKHLMMDIE 60 Query: 339 VWLAGQNLYREISSCS 354 W+ + RE SCS Sbjct: 61 TWVPSEEKDRETHSCS 76 >gi|308234213|ref|ZP_07664950.1| seryl-tRNA synthetase [Atopobium vaginae DSM 15829] Length = 34 Score = 67.1 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 17/32 (53%), Positives = 23/32 (71%) Query: 393 LIAILENYLNADGSVTIPTVLRPYMNNLAVIK 424 + AI+ENY NADGS+++P L+PYM L I Sbjct: 1 MAAIMENYQNADGSISVPEALQPYMRGLKTIP 32 >gi|90103273|gb|ABD85481.1| seryl-tRNA synthetase [Ictalurus punctatus] Length = 167 Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 6/85 (7%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + PE + +KR + + ++ D++ R +++ +N S Sbjct: 3 LDLDLFRTDKGGDPEIVRETQRKRFKDVSLVDKLVEADKEWRKCRFIADNLNKAKNLCSK 62 Query: 57 QIGQAIAEGNL-SLVDALKNETSTL 80 +G+ + + + L E L Sbjct: 63 SVGEKMKKKEPVGDDETLPEEVQNL 87 >gi|225630645|ref|YP_002727436.1| threonyl-tRNA synthetase [Wolbachia sp. wRi] gi|254783546|sp|C0R403|SYT_WOLWR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225592626|gb|ACN95645.1| threonyl-tRNA synthetase [Wolbachia sp. wRi] Length = 633 Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 65/203 (32%), Gaps = 11/203 (5%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D D A V ++ + + I +GY EV P+LV E +G Sbjct: 246 KDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWEKSG 305 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSEAG 266 KF ++MF + + + + LP+R R+E+ Sbjct: 306 HWDKFRENMFIVDESESKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESS 365 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 + G++R F + + EE +E + +E+ L + V Sbjct: 366 GSLH---GLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDR- 421 Query: 327 LGFSACKTYDLEVWLAGQNLYRE 349 + D EVW + E Sbjct: 422 ---PDVRAGDDEVWDRAEKALLE 441 >gi|58697298|ref|ZP_00372664.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] gi|58536340|gb|EAL59818.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] Length = 580 Score = 66.7 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 65/203 (32%), Gaps = 11/203 (5%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D D A V ++ + + I +GY EV P+LV E +G Sbjct: 246 KDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWEKSG 305 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSEAG 266 KF ++MF + + + + LP+R R+E+ Sbjct: 306 HWDKFRENMFIVDESESKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESS 365 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 + G++R F + + EE +E + +E+ L + V Sbjct: 366 GSLH---GLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDR- 421 Query: 327 LGFSACKTYDLEVWLAGQNLYRE 349 + D EVW + E Sbjct: 422 ---PDVRAGDDEVWDRAEKALLE 441 >gi|255659698|ref|ZP_05405107.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260848272|gb|EEX68279.1| threonine--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 639 Score = 66.3 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 102/327 (31%), Gaps = 30/327 (9%) Query: 23 LEPQSEY------ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKN 75 + + + ++++ + ++K E+++ R S + E L N Sbjct: 106 YDFDIDRQLTEADLADIEKEMKKIVK--ENLKLERKEVSREEALQFFEEKGETYKVELIN 163 Query: 76 ETSTLKEQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + E++ + + E + + + + + +L R G Sbjct: 164 DLPE-GEKITMYTQGEFTDLCAGPHVVSTGKVKALKLMSIAGAYWRGDEHNKMLQRIYGT 222 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFM 182 + + E D + K F + + L + Sbjct: 223 AFEKQADLDAYLHMLEEAKKRDHRKLGKQLDLFSLHEEGPGFPFFHPNGMIVRNELINYW 282 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNL 239 D+H +GY E+ P+++ + +G + ++M+ T + + P + + Sbjct: 283 RDVH-RRYGYQEIKTPIILNRQLWETSGHWDHYKENMYFTKIDGEDYAIKPMNCPGGMLV 341 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ + + LPLR L R E + G+ R F + + + E Sbjct: 342 YNSKQHSYRDLPLRLGELGLVHRHEKSG---ELHGLFRVRNFTQDDAHLFVTPDQVEQEI 398 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGD 326 + + +E+ L Y D Sbjct: 399 QHTIDLFDEVYNTFGLTYVAELSTRPD 425 >gi|329115645|ref|ZP_08244367.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326695073|gb|EGE46792.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 645 Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 97/345 (28%), Gaps = 23/345 (6%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN--ETS 78 R E +++ K R ++ K E I G + +++ E Sbjct: 110 RSEPFSPEDFAAIEAKMREIVAKAEPFVREVWKRDDAIQFFEDRGEKFKAELIRDLPEDE 169 Query: 79 TLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + Q L+ + K + + + + +L R G Sbjct: 170 EISIYRQGEWLDLCRGPHLRTTKDVGNAFKLMKVAGAYWRGDHRNPMLTRVYGTAWRDQK 229 Query: 137 LSREHFEIGEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHTSE 189 H E D R K A V Q + + Sbjct: 230 ELDAHLHQLEEAEKRDHRRIGKEMGLFHFQEEAVGQVFWHAKGWRLYTALQDYMRRAQTR 289 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEI 244 HGY EV P LV +G K+ MF T + + ++ H + Sbjct: 290 HGYQEVRTPQLVDRALWEASGHWDKYRHHMFIATVEDENKTLALKPMNCPCHVQIFRHGL 349 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LPLR R E A G++R F + + E+ E R + Sbjct: 350 RSYRELPLRMAEFGACHRYEPSGALH---GLMRVRGFTQDDAHIFCTEDQIADETVRFVK 406 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 ++ + L + V + EVW +N +E Sbjct: 407 MLHDVYQDLGFEHVRVKFADR----PEQRAGSDEVWDKAENALKE 447 >gi|313899489|ref|ZP_07832999.1| threonine--tRNA ligase [Clostridium sp. HGF2] gi|312955777|gb|EFR37435.1| threonine--tRNA ligase [Clostridium sp. HGF2] Length = 579 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 107/334 (32%), Gaps = 27/334 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++++ + + + R R S + + + + +D + + Sbjct: 60 EDLAKIEKEMKKI--AKDGKRIVRKEISKEEALEMFQNDPYKIDLISDLEDGTITCYQQG 117 Query: 88 EKEEHEVCSSLK--KLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 E + + K + + A+ +L R G +H + Sbjct: 118 EFIDLCRGPHVDTVKQLKNFKLLKHSGAYWKGDASNKMLQRIYGICFPTAEELEDHLHLL 177 Query: 146 EALGLMDFDR--------ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 E D + + + L F + HT E+ Y + Sbjct: 178 EEAKKRDHKKLGRELGLFMMSEFAPGMPFFLPNGMIIRNLLENFWYEEHTKEN-YQFIKT 236 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 P+++ E +G + ++M+ T + P + ++ + + K LPLR Sbjct: 237 PIMMSKELWEVSGHWENYKENMYTTMVDDREFAIKPMNCPGSLLVFKNGLHSYKDLPLRM 296 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 L R EA A G+ R F + + R + +E +++ + + Sbjct: 297 GELGQVHRHEASGAL---NGLFRVRTFTQDDAHIFMRPDQIESEVMQLIQFIDRVYSVFG 353 Query: 315 LHYRVVSLCTGDLGFSACKTY--DLEVWLAGQNL 346 L YR+ +L K Y DL +W + Sbjct: 354 LSYRI------ELSTRPEKKYIGDLAIWEQSEKA 381 >gi|258543038|ref|YP_003188471.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256634116|dbj|BAI00092.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256637176|dbj|BAI03145.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256640228|dbj|BAI06190.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256643285|dbj|BAI09240.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256646340|dbj|BAI12288.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256649393|dbj|BAI15334.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256652379|dbj|BAI18313.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655437|dbj|BAI21364.1| threonyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 645 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 97/345 (28%), Gaps = 23/345 (6%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN--ETS 78 R E +++ K R ++ K E I G + +++ E Sbjct: 110 RSEPFSPEDFAAIEAKMREIVAKAEPFVREVWKRDDAIRFFEERGEKFKAELIRDLPEDE 169 Query: 79 TLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + Q L+ + K + + + + +L R G Sbjct: 170 EISIYRQGEWLDLCRGPHLRTTKDVGTAFKLMKVAGAYWRGDHRNPMLTRVYGTAWRDQK 229 Query: 137 LSREHFEIGEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHTSE 189 H E D R K A V Q + + Sbjct: 230 ELDAHLHQLEEAEKRDHRRIGKEMGLFHFQEEAVGQVFWHAKGWRLYTALQDYMRRAQTR 289 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEI 244 HGY EV P LV +G K+ MF T + + ++ H + Sbjct: 290 HGYQEVRTPQLVDRALWEASGHWDKYRHHMFIATVEDENKTLALKPMNCPCHVQIFRHGL 349 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LPLR R E A G++R F + + E+ E R + Sbjct: 350 RSYRELPLRMAEFGACHRYEPSGALH---GLMRVRGFTQDDAHIFCTEDQIADETVRFVK 406 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 ++ + L + V + EVW +N +E Sbjct: 407 MLHDVYQDLGFEHVRVKFADR----PEQRAGSDEVWDKAENALKE 447 >gi|83859100|ref|ZP_00952621.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] gi|83852547|gb|EAP90400.1| threonyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] Length = 613 Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 68/182 (37%), Gaps = 10/182 (5%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-- 220 + G++ E + + GY VS P + + + + +G +P +A+DM+ Sbjct: 223 PMWLPAGNVIRDELEKLARITEHRA---GYKRVSTPHITKGDLYHRSGHLPYYAEDMYAP 279 Query: 221 -CTTDGRWLIPTSEVSLTNL-YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + + + ++ Y+H+ + LP+R + +R EA G++R Sbjct: 280 IMIDEQEYYLRPMNCPHHHMIYAHDQWSYRDLPVRLSEYGQVYRYEASGGLS---GLMRV 336 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 F + + R + + E ++ + + + + L D+ D E Sbjct: 337 RGFCQNDAHIYCRPDQAKDEFLAVMHMHADYYRLFGIQDFWMRLSLPDMENLDKYVDDAE 396 Query: 339 VW 340 W Sbjct: 397 GW 398 >gi|47198709|emb|CAF87429.1| unnamed protein product [Tetraodon nigroviridis] Length = 175 Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Query: 2 LDIQWIRQN----PEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + PE + + +KR + + +++ D + R +++ +N S Sbjct: 3 LDLDLFRTDKGGDPEIVRESQRKRFKDVTLVDKLVAADTEWRKCRFTADNLNKAKNLCSR 62 Query: 57 QIGQAIA 63 IG+ + Sbjct: 63 SIGEKMK 69 >gi|302339715|ref|YP_003804921.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301636900|gb|ADK82327.1| threonyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 585 Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 92/317 (29%), Gaps = 26/317 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS--LVDALK-----NETSTL 80 + + + K + +IK + R S + + + G V+ LK E S Sbjct: 59 DDLEKISAKMKDIIKGKHPFQ--RKVISREEAEKLFSGKGEQYKVELLKAIPEGEEVSLY 116 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 + V ++ + + +L R G R Sbjct: 117 SQDSFTDLCRGPHVENTADLNAEAFKLLSIAGAYWRGKETNPMLTRIYGTAWENPKELRL 176 Query: 141 HFEIGEALGLMDFDRA---------TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + + E + D + + +G A + + F D H ++G Sbjct: 177 YLKHLEEMEKRDHRKLGRELDLFSLHEEAGPGLVYWHPKGARIRHQIETFWKDEH-FKNG 235 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIES 247 Y + P + + +G + +A+ M+ ++ + Sbjct: 236 YELLYTPHVGKSWLWETSGHLDFYAEGMYPEMVMDKANYYAKPMNCPFHIMIYKTNKHSY 295 Query: 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAE 307 + LP R+ L +R E G++R F + + E E +L + Sbjct: 296 RELPFRWAELGTVYRYEKSG---TLHGLMRVRGFTQDDAHIFCTPEQVEDEILEVLRFSL 352 Query: 308 EILKRLDLHYRVVSLCT 324 +L+ L T Sbjct: 353 HMLRAFGFSDIQAYLST 369 >gi|84687895|ref|ZP_01015762.1| threonyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84664089|gb|EAQ10586.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 649 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 104/344 (30%), Gaps = 34/344 (9%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++ K + +I +++R S + I G V+ + Sbjct: 110 DRDEPFTPEDLGAIEAKMKEIINARDEVRTEVWSRADAIAHYEKTGEPYKVE----LVNA 165 Query: 80 LKEQLPILEKEEHEVCSSLKK--LISCIPNVPLEEV--------PIGTSANENILIRSVG 129 + + + H L + + VP + + +L R G Sbjct: 166 IPDDGQPIRMYWHGDWQDLCRGPHLQNTGQVPADAFKLMKVAGAYWRGDSTRPMLQRIYG 225 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFM 182 ++H E D R + A V + Q Sbjct: 226 VAFKNRDDLKKHLTFLEEAEKRDHRRLGREMDLFHMQEEAPGQVFWHPNGWTIYTVLQDY 285 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTN 238 + GY EV+ P +V + +G K+ ++MF R + + Sbjct: 286 MRRQQQRGGYVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNC 345 Query: 239 LYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +I + LPLR R E A G++R F + + E+ Sbjct: 346 PCHVQIFNVGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDAHIFCTED 402 Query: 294 DSFTEHERMLSCAEEILKRLDLH-YRVVSLCTGDLGFSACKTYD 336 +E ER +S I K L Y++ D + + +D Sbjct: 403 QIESETERFISFLAGIYKDLGFPTYKIKFSDRPDTRAGSDEIWD 446 >gi|254456038|ref|ZP_05069467.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207083040|gb|EDZ60466.1| threonyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 638 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 58/433 (13%), Positives = 122/433 (28%), Gaps = 63/433 (14%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R + ++ ++ K + ++ + E + + I +G + + E Sbjct: 108 RKESFTEDDLIKIENKMKEIVDRDEITKREVWERNKAIAHFKKKGEVYKAELIEAIPENE 167 Query: 79 TLKEQLP--ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + + SS K+ + + +L R G ++ Sbjct: 168 DVSIYFHGDWHDLCRGPHLSSTGKIGKYFKLTKVSGAYWRGDSKNEMLQRIYGTSWASQK 227 Query: 137 LSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSE 189 E+ + E D + K + SV + Sbjct: 228 ELDEYLKRIEEAEKRDHRKLGKEMDLFHFREESPGSVFWHEKGWALFQKLINYMRSRQDA 287 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEII---- 245 GY EV+ P ++ + +G K+ ++M+ + + + + Sbjct: 288 AGYREVNTPEILDRQLWEKSGHWEKYGENMYTSETPDEKVFAIKPMNCPGHIQVFNQGLK 347 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LP+R R E A G+LR F + + E+ +E + + Sbjct: 348 SYRDLPIRIAEFGKVHRYEPSGALH---GLLRVRAFTQDDAHIFCSEDQITSECLEVTNL 404 Query: 306 AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG-------- 357 +I K L ++ + D E+W + E S Sbjct: 405 ILDIYKDLGFENVILKYADR----PEVRVGDDEIWDKAEASLLEAVKASKLEYSINKGEG 460 Query: 358 -----------------NFQS----------RRMNSRYRDPNSKSLKFT--H-TLNGSGV 387 ++Q R+++ Y D + H L GS Sbjct: 461 AFYGPKIEFVLRDAIGRDWQCGTLQVDLNLPGRLDASYVDKDGTKKVPVMLHRALFGSL- 519 Query: 388 AVGRCLIAILENY 400 R + ++ENY Sbjct: 520 --ERFIGILIENY 530 >gi|293400866|ref|ZP_06645011.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305892|gb|EFE47136.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 577 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 107/335 (31%), Gaps = 29/335 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++++ + + + R R S + + + +D L + Sbjct: 58 EDLPKIEKEMKKI--AKDGKRIVRKEISKEEALEMFADDPYKID-LIQDLEDGTITCYQQ 114 Query: 88 EKEEHEVCSSLKK---LISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 + + L+ + A +L R G EH + Sbjct: 115 GEFIDLCRGPHVETVKLLKNFKLLKHSGAYWKGDAENKMLQRIYGVCYPTKEELEEHLHM 174 Query: 145 GEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 E D + + G + + L F + HT E+ Y + Sbjct: 175 LEEAKKRDHKKLGREMGLFMMSEYAPGMPFFLPNGMIIRNLLENFWYEEHTKEN-YKFIK 233 Query: 197 APLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLR 253 P+++ E +G + ++M+ T + P + ++ + + K LPLR Sbjct: 234 TPIMMSKELWEVSGHWANYKENMYTTMVDDREFAIKPMNCPGSLLVFKNGLHSYKDLPLR 293 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 L R EA A G+ R F + + R + +E + +++ + + Sbjct: 294 MGELGQVHRHEASGAL---NGLFRVRTFTQDDAHIFMRPDQIESEVKELINFIDRVYSIF 350 Query: 314 DLHYRVVSLCTGDLGFSACKTY--DLEVWLAGQNL 346 L YR+ +L K Y DL +W + Sbjct: 351 GLSYRI------ELSTRPEKKYIGDLAIWEKSEKA 379 >gi|44662853|gb|AAS47508.1| seryl tRNA synthetase [Meiothermus silvanus DSM 9946] Length = 78 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%) Query: 279 HQFWKCELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 H+F K E I E+S ERML+ +E+IL+ L+L YRVV + TGD+G + D Sbjct: 1 HEFRKVEQYVLCIADVEESNRWFERMLANSEKILQALELPYRVVEVSTGDMGLGKYRQVD 60 Query: 337 LEVWLAGQNLYREISSCS 354 LE W+ + RE SCS Sbjct: 61 LETWVPSEGRDRETHSCS 78 >gi|120611523|ref|YP_971201.1| threonyl-tRNA synthetase [Acidovorax citrulli AAC00-1] gi|166223312|sp|A1TR39|SYT_ACIAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120589987|gb|ABM33427.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidovorax citrulli AAC00-1] Length = 639 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 68/203 (33%), Gaps = 11/203 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV P ++ TG K+ ++MF Sbjct: 258 HSPGTVFWHPKGWTIWQGVEQYMRQVYRDNGYQEVKGPQILDKHLWEKTGHWDKYRENMF 317 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LPLR+ R+E G++R Sbjct: 318 TTESEKHDYALKPMNCPGHILIFNQGVKSYRDLPLRYGEFGQCHRNEPTGGLH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E+ E + +++ K + + T + Sbjct: 375 VRAFTQDDGHIFCTEDQIQQECINFTALLQKVYKDFGFTDIIYKVATR----PEKRIGSE 430 Query: 338 EVWLAGQNLYREISSCSTCGNFQ 360 E W +N E S C ++Q Sbjct: 431 ESWDKAENALIESLKASGC-DYQ 452 >gi|326317187|ref|YP_004234859.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374023|gb|ADX46292.1| threonyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 639 Score = 64.4 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 68/203 (33%), Gaps = 11/203 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV P ++ TG K+ ++MF Sbjct: 258 HSPGTVFWHPKGWTIWQGVEQYMRQVYRDNGYQEVKGPQILDKHLWEKTGHWDKYRENMF 317 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LPLR+ R+E G++R Sbjct: 318 TTESEKHDYALKPMNCPGHILIFNQGVKSYRDLPLRYGEFGQCHRNEPTGGLH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E+ E S +++ K + + T + Sbjct: 375 VRAFTQDDGHIFCTEDQIQQECINFTSLLQKVYKDFGFTDIIYKVATR----PEKRIGSE 430 Query: 338 EVWLAGQNLYREISSCSTCGNFQ 360 E W +N E S C ++Q Sbjct: 431 ESWDKAENALIESLKASGC-DYQ 452 >gi|58700004|ref|ZP_00374566.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533480|gb|EAL57917.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] Length = 342 Score = 64.4 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 64/201 (31%), Gaps = 11/201 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V ++ + + I +GY EV P+LV E +G Sbjct: 1 MDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWEKSGHW 60 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSEAGSA 268 KF ++MF + + + + LP+R R+E+ + Sbjct: 61 DKFRENMFIVDESESKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGS 120 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 G++R F + + EE +E + +E+ L + V Sbjct: 121 LH---GLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDR--- 174 Query: 329 FSACKTYDLEVWLAGQNLYRE 349 + D EVW + E Sbjct: 175 -PDVRAGDDEVWDRAEKALLE 194 >gi|227501051|ref|ZP_03931100.1| threonine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227216824|gb|EEI82222.1| threonine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 667 Score = 64.4 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 105/334 (31%), Gaps = 20/334 (5%) Query: 18 LKKRHLEPQSEYILS--LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL-K 74 L+ R E I L+ + L K+E + RN + + + L++ L + Sbjct: 135 LEHRFTPEDLEKIEKKMLELAKKDL--KLERVEISRNEALEMFKKDKQDYKVELIEDLPE 192 Query: 75 NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 +E TL + + K+I + + ++ +L R G Sbjct: 193 DEKITLYKMGDVFVDLCRGPHLESTKVIKAVKLKTIAGAYWRGDSDRQMLQRIYGISFEK 252 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 E+ E+ + + D + + F + L L + D+ Sbjct: 253 AKQLEEYEELQKEIEKRDHRKIGREMNLFAFHEEGPGFPFFHPNGMILMNELLVWWTDV- 311 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV---SLTNLYSHE 243 + +GY E+ PL++ + + +G + ++M+ T + Y+ Sbjct: 312 LNNNGYGEIKTPLILNEALWHRSGHWDHYKENMYFTKIDGEAYAVKPMNCPGSVLTYAAN 371 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + LP+R R E G+ R F + + E +M+ Sbjct: 372 QHSYRDLPIRLAEYGQVHRHELSG---TLHGLFRVRTFTQDDAHVYCMPSQIKEEVYKMI 428 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 A+ + Y + D K +D Sbjct: 429 DLADLLYSTFGFKYTIELSTRPDDFMGEIKDWDF 462 >gi|164687668|ref|ZP_02211696.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM 16795] gi|164603442|gb|EDQ96907.1| hypothetical protein CLOBAR_01310 [Clostridium bartlettii DSM 16795] Length = 639 Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 105/350 (30%), Gaps = 35/350 (10%) Query: 23 LEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKN 75 + + + ++ + + + ED++ R S + A+ N L Sbjct: 104 YDIDLDHRITEEELAKIEAEMKKI--AKEDLKIERYELSKEDALKWAKENGEDYKVELIE 161 Query: 76 ETSTLKEQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 E E + ++ + K + + + + +L R G Sbjct: 162 ELPE-GEVISFYKQGDFADLCRGPHLPSTKKVKAVKLLSVAGAYWRGDEKNKMLQRIYGT 220 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFM 182 + + E D + K F + L+ AL +F Sbjct: 221 SFEKNKDLEAYLHLMEEAKKRDHRKLGKELDLFFIPEEGPGFPLFMPKGMQLKNALLEFW 280 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNL 239 ++H ++ Y E+ P+++ +G + ++M+ + P + Sbjct: 281 REVHKEDN-YVEIETPIILNRHLWETSGHWYHYKENMYTVKIDDQDFAIKPMNCPGGMLY 339 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y + + P+R L R E A G++R F + + E E Sbjct: 340 YKSKPHSYRDFPMRVAELGRVHRHELSGALH---GLMRVRAFTQDDAHIFMLPEQIKDEI 396 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + ++ + + K Y + + D E W +N RE Sbjct: 397 KDVVRLIDSVYKVFGFQYGIELSTRPE----DSMGTD-EEWEIAENGLRE 441 >gi|42520791|ref|NP_966706.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] gi|73919843|sp|Q73GH6|SYT_WOLPM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|42410531|gb|AAS14640.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 633 Score = 64.0 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 65/203 (32%), Gaps = 11/203 (5%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D D A V ++ + + I +GY EV P+LV E +G Sbjct: 246 KDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWERSG 305 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSEAG 266 KF ++MF + + + + LP+R R+E+ Sbjct: 306 HWDKFRENMFIVDESENKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESS 365 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 + G++R F + + EE +E + +E+ L + V Sbjct: 366 GSLH---GLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDR- 421 Query: 327 LGFSACKTYDLEVWLAGQNLYRE 349 + + EVW + E Sbjct: 422 ---PDIRAGNDEVWDRAEKALLE 441 >gi|297281891|ref|XP_001083218.2| PREDICTED: seryl-tRNA synthetase, cytoplasmic-like [Macaca mulatta] Length = 90 Score = 64.0 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Query: 381 TLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM--NNLAVIK 424 LN + A R + AILENY G +T+P L+ +M +I Sbjct: 1 MLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIP 45 >gi|312371301|gb|EFR19526.1| hypothetical protein AND_22285 [Anopheles darlingi] Length = 493 Score = 63.6 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 117/372 (31%), Gaps = 34/372 (9%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 + + E R + + + I R +I Q++ + + LK+ +E Sbjct: 122 SIDCDSLKLQWELYRDVELRKKQIEQSRIELQKRIQQSV---DEAEKKHLKSRAILARED 178 Query: 84 LPI-LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHF 142 L E+ + + +PN E P + ++P S+E Sbjct: 179 LKALKEQSYAVADAFIANNFLALPNDLHERTPEEEGKILYENVAPSSRQPR----SKEVL 234 Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + G F+ L F + + + + S P VR Sbjct: 235 QAGARTIQEQFEEYDALC---FYMTDDAAFMDLQLPIRCCETFQ--RDNFIVFSNPDFVR 289 Query: 203 DEAMYG------TGQIPKFADDMFCTTDGRWLIPTSEV-SLTNLYSHEIIESKSLPLRFT 255 + T + + ++ + L + S ++ + +LPL+ Sbjct: 290 SFLVEAAMVDKETLHLIREDEEPADKVNLLHLCGGGTLLSYLGYFTKLSVFPSALPLKLV 349 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R + H F C E++ + L +L + Sbjct: 350 ARGKRYR-------QHQVQSNTVHMFGACRSY-----EEAEALFDETLLTYRRFYDQLPV 397 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKS 375 YR+V + DL + D+E++ Y +I S G+F S+R + + K+ Sbjct: 398 EYRLVQVAACDLQPAESMRIDVELYDWQNRGYVKIGDLSFYGDFLSKR--IAFIYQDGKA 455 Query: 376 LKFTHTLNGSGV 387 +F H + G + Sbjct: 456 QRFPHIVAGQAI 467 >gi|218282135|ref|ZP_03488434.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989] gi|218216861|gb|EEC90399.1| hypothetical protein EUBIFOR_01014 [Eubacterium biforme DSM 3989] Length = 587 Score = 63.6 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 107/338 (31%), Gaps = 25/338 (7%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 ++ + E + ++++ + + + R R S + + + + +D L N Sbjct: 60 VKLKEEDLAKIEKEMKKI--AKDGKRIVREEISKEDALEMFKDDPYKID-LINGLEDGNI 116 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVP---LEEVPIGTSANENILIRSVGKKPSAIHLSR 139 + + + + N AN +L R G Sbjct: 117 TIYRQGEFADLCRGPHVETVKMCKNFKLLKHSGAYWKGDANNKMLQRVYGICFDTKEELE 176 Query: 140 EHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 H E E D + K G + L L Q+ HT E G Sbjct: 177 AHLEALEEAKKRDHKKLGKEMGLFTISEFAPGMPIFLPDGMILRNILEQYWYQEHTKE-G 235 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESK 248 Y + P+++ E +G + D+M+ + + P + +Y+ + K Sbjct: 236 YQFIKTPIMMSKELWELSGHWDHYKDNMYTSMVDDREFAIKPMNCPGALLVYNSTLHSYK 295 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LPLR L R EA A G+ R F + + + E +++L + Sbjct: 296 DLPLRLGELGQVHRHEASGAL---NGLFRVRTFTQDDAHLFVTPDQLEEEVKKVLQLVDR 352 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 I L Y + + G+ + E+W + Sbjct: 353 IYSVFGLPYEIELSTRPESGYIGSE----EIWDVSEKA 386 >gi|319943475|ref|ZP_08017757.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599] gi|319743290|gb|EFV95695.1| threonine--tRNA ligase [Lautropia mirabilis ATCC 51599] Length = 636 Score = 63.6 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 74/247 (29%), Gaps = 10/247 (4%) Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + + +H+ E + D D + A V Sbjct: 208 DANNEMLQRIYGTAWARKEDQDAYLHMLEEAEKRDHRKLGKDLDLFHTQAEAPGMVFWHP 267 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 + I ++GY EV P ++ + +G + ++MF + + Sbjct: 268 RGWTIWQRIEQYIREKYQKNGYQEVRCPQILDVDLWKRSGHWDNYKENMFFSESEKREYA 327 Query: 231 TSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 ++ L++ + + LPLR+ R+E A G++R F + + Sbjct: 328 VKPMNCPGHVQLFNASLRSYRDLPLRYAEFGSCHRNEPSGALH---GIMRVRGFTQDDGH 384 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 EE E A + + V L L + D E W +N Sbjct: 385 IFCTEEQVEAEVTAFHQQAMAVYRDFGFTDVSVKLA---LRPTQRLGTD-EAWDRAENAL 440 Query: 348 REISSCS 354 R S Sbjct: 441 RAALSAC 447 >gi|99035129|ref|ZP_01314912.1| hypothetical protein Wendoof_01000242 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 536 Score = 63.6 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 65/203 (32%), Gaps = 11/203 (5%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D D A V ++ + + I +GY EV P+LV E +G Sbjct: 149 KDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWERSG 208 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSEAG 266 KF ++MF + + + + LP+R R+E+ Sbjct: 209 HWDKFRENMFIVDESENKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESS 268 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 + G++R F + + EE +E + +E+ L + V Sbjct: 269 GSLH---GLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDR- 324 Query: 327 LGFSACKTYDLEVWLAGQNLYRE 349 + + EVW + E Sbjct: 325 ---PDIRAGNDEVWDRAEKALLE 344 >gi|119576770|gb|EAW56366.1| seryl-tRNA synthetase, isoform CRA_b [Homo sapiens] Length = 209 Score = 63.6 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 69/205 (33%), Gaps = 29/205 (14%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL N + S +K E + + E Sbjct: 63 TIGEKMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERI 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 ++ + + + I N+ VPI + ++ + Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDEKLKEFMPPGLQELIPFVKPAPIEQEPSKKQKKQ 182 Query: 153 FDRATKLSGARFSVLTGHLAHLERA 177 + + K + AR L L ++E Sbjct: 183 HEGSKKKAAARDVTLENRLQNMEVT 207 >gi|123220018|emb|CAM22592.1| seryl-aminoacyl-tRNA synthetase [Mus musculus] Length = 187 Score = 63.6 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 53/147 (36%), Gaps = 29/147 (19%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQAIAEG----------------NLSLVDALKN-ETSTLK-------EQLPILEKEEH 92 IG+ + + + DAL + S +K E + + E Sbjct: 63 TIGEKMKKKEAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKCDGERV 122 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSA 119 ++ + + + I N+ VPI Sbjct: 123 KLEAERFENLREIGNLLHPSVPISNDE 149 >gi|148269334|ref|YP_001243794.1| threonyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|166225512|sp|A5IJ45|SYT_THEP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|147734878|gb|ABQ46218.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thermotoga petrophila RKU-1] Length = 640 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 98/320 (30%), Gaps = 20/320 (6%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 ++ + E + ++++ + +IK E++ R S + + + ++ L E Sbjct: 109 KNGKLTEEDLPKIEQEMKKIIK--ENLPIERKEISKEEARKLFNNQPYKLE-LIEEIEGD 165 Query: 81 KEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 + + + ++ + + S +L R G + Sbjct: 166 RVTIYRQGEFVDLCRGPHLPSTGVVKHFKLLSVSGAYWRGSEKNPMLTRVYGTAFAKKED 225 Query: 138 SREHFEIGEALGLMDFDRAT---KLSGARFSVLTGHLAHLERAL-----GQFMIDLHTSE 189 + + E D + +L G L + + E Sbjct: 226 LDNYLKFLEEAQRRDHRKLGPHLELFMLNTEYAPGMPFFLPKGVVVLNELMRFSRELHRE 285 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIE 246 GY E+ PL++ ++ +G +A++M+ ++ +Y + Sbjct: 286 RGYQEIFTPLIMNEQLWKISGHWDHYAENMYFIEKDEERYAVKPMNCPGHILVYKSRTVS 345 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LPLRF R E G++R F + + + E +L Sbjct: 346 YRDLPLRFFEFGRVHRYERSGVLH---GLMRVRSFTQDDAHIFCTPDQIEEEILGVLDLI 402 Query: 307 EEILKRLDLHYRVVSLCTGD 326 I + YRV + Sbjct: 403 NTIYGQFGFTYRVELSTMPE 422 >gi|281411969|ref|YP_003346048.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|281373072|gb|ADA66634.1| threonyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 640 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 98/320 (30%), Gaps = 20/320 (6%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 ++ + E + ++++ + +IK E++ R S + + + ++ L E Sbjct: 109 KNGKLTEEDLPKIEQEMKKIIK--ENLPIERKEISKEEARKLFNNQPYKLE-LIEEIEGD 165 Query: 81 KEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 + + + ++ + + S +L R G + Sbjct: 166 RVTIYRQGEFVDLCRGPHLPSTGVVKHFKLLSVSGAYWRGSEKNPMLTRVYGTAFAKKED 225 Query: 138 SREHFEIGEALGLMDFDRAT---KLSGARFSVLTGHLAHLERAL-----GQFMIDLHTSE 189 + + E D + +L G L + + E Sbjct: 226 LDNYLKFLEEAQRRDHRKLGPHLELFMLNTEYAPGMPFFLPKGVVVLNELMRFSRELHRE 285 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIE 246 GY E+ PL++ ++ +G +A++M+ ++ +Y + Sbjct: 286 RGYQEIFTPLIMNEQLWKISGHWDHYAENMYFIEKDEERYAVKPMNCPGHILVYKSRTVS 345 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LPLRF R E G++R F + + + E +L Sbjct: 346 YRDLPLRFFEFGRVHRYERSGVLH---GLMRVRSFTQDDAHIFCTPDQIEEEILGVLDLI 402 Query: 307 EEILKRLDLHYRVVSLCTGD 326 I + YRV + Sbjct: 403 NTIYGQFGFTYRVELSTMPE 422 >gi|254995424|ref|ZP_05277614.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Mississippi] Length = 636 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 75/245 (30%), Gaps = 10/245 (4%) Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 ++ S S IH +E + D + A V Sbjct: 207 WLGDQKNKMLQRVYGTAWHSSEALASYIHNMQEAEKRDHRKIAKDLGWFHIQNEALGQVF 266 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW 227 + + + I +HGY EV P+++ + +G KF ++MF D + Sbjct: 267 WHDKGWVIYRIIEEYIRCKLKKHGYHEVKTPIMLDRKLWEKSGHWEKFKENMFVVEDDKK 326 Query: 228 LIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + ++ ++ +I K LP+R R+E + G++R F + Sbjct: 327 ELAIKPMNCPCHVQIFKSKIRSYKELPIRMAEFGMCHRNEPSGSLY---GLMRVRGFTQD 383 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + E E R E+ K V L + E+W + Sbjct: 384 DAHIFCTHEQVRDEVLRFYELLMEVYKDFGFDSVTVKLSDR----PENRIGSDEIWDRSE 439 Query: 345 NLYRE 349 E Sbjct: 440 QSLME 444 >gi|58584729|ref|YP_198302.1| threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|73919844|sp|Q5GSG4|SYT_WOLTR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58419045|gb|AAW71060.1| Threonyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 632 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 66/203 (32%), Gaps = 11/203 (5%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D D A V + + + I +GY EV P+LV E +G Sbjct: 246 KDMDLFHIQEEAVGQVFWHEQGYTLYNVLESYIRKKLINNGYAEVKTPILVSKELWEKSG 305 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSEAG 266 KF ++MF + + + ++LP+R R+E+ Sbjct: 306 HWDKFRENMFIVDESESKKLAIKPMNCPCHVQIFNSYTRSYRNLPIRMAEFGMCHRNESS 365 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 + G++R F + + EE +E + + +E+ L + V Sbjct: 366 GSLH---GLMRVRGFTQDDAHIFCMEEQVNSETVKFCALLKEVYSELGFNEISVKFSDR- 421 Query: 327 LGFSACKTYDLEVWLAGQNLYRE 349 + D EVW + E Sbjct: 422 ---PNVRAGDNEVWDRAEKALLE 441 >gi|56417255|ref|YP_154329.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries] gi|73919765|sp|Q5P9F6|SYT_ANAMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56388487|gb|AAV87074.1| threonyl-tRNA synthetase [Anaplasma marginale str. St. Maries] Length = 636 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 75/245 (30%), Gaps = 10/245 (4%) Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 ++ S S IH +E + D + A V Sbjct: 207 WLGDQKNKMLQRVYGTAWHSSEALASYIHNMQEAEKRDHRKIAKDLGWFHIQNEALGQVF 266 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW 227 + + + I +HGY EV P+++ + +G KF ++MF D + Sbjct: 267 WHDKGWVIYRIIEEYIRCKLKKHGYHEVKTPIMLDRKLWEKSGHWEKFKENMFVVEDDKK 326 Query: 228 LIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + ++ ++ +I K LP+R R+E + G++R F + Sbjct: 327 ELAIKPMNCPCHVQIFKSKIRSYKELPIRMAEFGMCHRNEPSGSLY---GLMRVRGFTQD 383 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + E E R E+ K V L + E+W + Sbjct: 384 DAHIFCTHEQVRDEVLRFYELLMEVYKDFGFDSVTVKLSDR----PENRIGSDEIWDRSE 439 Query: 345 NLYRE 349 E Sbjct: 440 QSLME 444 >gi|123965897|ref|YP_001010978.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] gi|166225479|sp|A2BVR0|SYT_PROM5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123200263|gb|ABM71871.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] Length = 638 Score = 63.2 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 104/341 (30%), Gaps = 32/341 (9%) Query: 28 EYILSLDEKNRILIKK---IEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLKEQ 83 E ++ ++E+ LI+K +E ++ S Q + + + E K+ Sbjct: 115 EDLIKIEERINQLIRKDYDVEVLQ-----VSKQEAIKTFKERDEIFKLRIIEEIDE-KDS 168 Query: 84 LPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 + + + EE+ + + + L + L R G S Sbjct: 169 INLYKHEEYIDMCRGPHVPNTRHLRHFKLLKLSGSYWRGDSKNESLQRIYGTAWSKEKDL 228 Query: 139 REHFEIGEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + + E D + K + + + + + I ++ Sbjct: 229 TNYLKRIEEAEKRDHRKLGKKHSLFHIQEESPGMIFWHPNGWIIYQILEKYIREILRKNE 288 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESK 248 Y E+ P V +G KF DDMF T ++ +++ + K Sbjct: 289 YLEIKTPQAVDKSLWEKSGHWEKFRDDMFTTASENRTYAIKPMNCPCHIQVFNQGLKSYK 348 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LPLR R+E A G++R F + + EE E + E Sbjct: 349 DLPLRLAEFGSCHRNEPSGALH---GLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFE 405 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + ++ L T + ++W + E Sbjct: 406 VYNTFGFDEIIIKLSTR----PEKRVGSEDIWDKSEEALTE 442 >gi|58700192|ref|ZP_00374690.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533291|gb|EAL57792.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] Length = 246 Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 65/203 (32%), Gaps = 11/203 (5%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D D A V ++ + + I +GY EV P+LV E +G Sbjct: 36 KDMDLFHIQEEAVGQVFWHEQGYILYNVLESYIRKKLINNGYFEVKTPILVSKELWEKSG 95 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSEAG 266 KF ++MF + + + + LP+R R+E+ Sbjct: 96 HWDKFRENMFIVDESESKKLAIKPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESS 155 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 + G++R F + + EE +E + +E+ L + V Sbjct: 156 GSLH---GLMRVRGFTQDDAHIFCMEEQVNSETIKFCDLLKEVYSELGFNEISVKFSDR- 211 Query: 327 LGFSACKTYDLEVWLAGQNLYRE 349 + D EVW + E Sbjct: 212 ---PDVRAGDDEVWDRAEKALLE 231 >gi|167756637|ref|ZP_02428764.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402] gi|237733925|ref|ZP_04564406.1| threonyl-tRNA synthetase [Mollicutes bacterium D7] gi|167702812|gb|EDS17391.1| hypothetical protein CLORAM_02174 [Clostridium ramosum DSM 1402] gi|229383006|gb|EEO33097.1| threonyl-tRNA synthetase [Coprobacillus sp. D7] Length = 577 Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 106/339 (31%), Gaps = 28/339 (8%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + + E I ++++ + + K + R R S + + + + +D + N + Sbjct: 52 NDVIKDEDIPKIEKEMKKICK--DGKRITRQEISKEEALEMFKDDEYKIDLINNFENDTT 109 Query: 82 EQLPILEKEEHEVCSSLKKL---ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 + +L R G Sbjct: 110 ISCYRQGDFVDLCRGPHVETVKACKNFKLTKHSGAYWKGDKENKVLQRIYGVCFETSEDL 169 Query: 139 REHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEH 190 +H E+ E D + K G L L QF + H E Sbjct: 170 AKHLELLEEAKRRDHKKLGKELGLFMMSEYAPGMPFFLPKGMILRNTLEQFWYEEHAKE- 228 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIES 247 GY + P+++ E +G + +DM+ + + P + +Y + + Sbjct: 229 GYEFIKTPIMMSRELWETSGHWENYKEDMYTSMVDDREFAIKPMNCPGSLLVYKNSLHSY 288 Query: 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAE 307 K LPLR L R EA A G+ R F + + + E R+++ + Sbjct: 289 KDLPLRMGELGQVHRHEASGAL---NGLFRVRTFTQDDAHIYMTPDQIEGEIIRLINFID 345 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTY--DLEVWLAGQ 344 + L+L Y + +L K Y DL +W + Sbjct: 346 RVYGSLNLSYEI------ELSTRPEKKYIGDLAIWEKSE 378 >gi|83951679|ref|ZP_00960411.1| threonyl-tRNA synthetase [Roseovarius nubinhibens ISM] gi|83836685|gb|EAP75982.1| threonyl-tRNA synthetase [Roseovarius nubinhibens ISM] Length = 648 Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 103/359 (28%), Gaps = 28/359 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K R +I K +++R + + G V+ ++ Sbjct: 110 DRAEPFTPEDLGEIEKKMREIINKRDEVRTEIWDRARAVKHYEDNGEPFKVELIEAIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + + + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSSRQMLQRIYGVAFTG 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + +H+ E + + D A V Q + Sbjct: 230 KEKLKAHLHMLEEAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTIYTELQDYMRRAQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ + MF R + + + Sbjct: 290 RAGGYVEVNTPQVVDRKLWEKSGHWEKYQEHMFIVEVDEEHAREKAVNALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I + LPLR R E A G++R F + + RE+ +E Sbjct: 350 IFNQGLKSYRDLPLRMAEFGSCNRYEPSGALH---GVMRVRGFTQDDGHIFCREDQIESE 406 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 +R + + + L V ++ EVW + + + + C Sbjct: 407 TKRFIDFLSRVYRDLGFENFSVKFSDR----PEKRSGSDEVWDKAETALKSATEAANCS 461 >gi|297544949|ref|YP_003677251.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842724|gb|ADH61240.1| threonyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 634 Score = 62.9 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 96/311 (30%), Gaps = 24/311 (7%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLKE 82 +E +++++ +IK+ + R + EG L E E Sbjct: 110 PFTTEDFEAIEQEMNKIIKEDYKL--ERFVLPKDKAIKLMEGKGEPYKVELIKEIPE-GE 166 Query: 83 QLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 ++ ++ E ++ I + + +L R G + Sbjct: 167 EISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSM 226 Query: 138 SREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSE 189 E+ + E D + K F + L F H + Sbjct: 227 LDEYLHMLEEAKKRDHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEH-MK 285 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIE 246 HGY E+ P+++ +E +G + ++M+ T + + P + +Y + Sbjct: 286 HGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHS 345 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LPLR L R E G++R F + + E E +++ Sbjct: 346 YRDLPLRLCELGLVHRHELSGVLH---GLMRVRSFTQDDAHLFMTPEQVEDEILGVINLV 402 Query: 307 EEILKRLDLHY 317 + K Y Sbjct: 403 DYFYKIFGFEY 413 >gi|325066244|ref|ZP_08124917.1| seryl-tRNA synthetase [Actinomyces oris K20] Length = 48 Score = 62.9 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDI 47 M+D++ +R+NPE + + R + + +++ DE R + E++ Sbjct: 1 MIDLRALRENPEPFRASQRARGADVDLVDRVIAADETRRQALAAFENL 48 >gi|167037181|ref|YP_001664759.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115599|ref|YP_004185758.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856015|gb|ABY94423.1| threonyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928690|gb|ADV79375.1| threonyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 634 Score = 62.9 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 96/311 (30%), Gaps = 24/311 (7%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLKE 82 +E +++++ +IK+ + R + EG L E E Sbjct: 110 PFTTEDFEAIEQEMNKIIKEDYKL--ERFVLPKDKAIKLMEGKGEPYKVELIKEIPE-GE 166 Query: 83 QLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 ++ ++ E ++ I + + +L R G + Sbjct: 167 EISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSM 226 Query: 138 SREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSE 189 E+ + E D + K F + L F H + Sbjct: 227 LDEYLHMLEEAKKRDHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEH-MK 285 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIE 246 HGY E+ P+++ +E +G + ++M+ T + + P + +Y + Sbjct: 286 HGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHS 345 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LPLR L R E G++R F + + E E +++ Sbjct: 346 YRDLPLRLCELGLVHRHELSGVLH---GLMRVRSFTQDDAHLFMTPEQVEDEILGVINLV 402 Query: 307 EEILKRLDLHY 317 + K Y Sbjct: 403 DYFYKIFGFEY 413 >gi|255004741|ref|ZP_05279542.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Virginia] Length = 636 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 75/245 (30%), Gaps = 10/245 (4%) Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 ++ S S IH +E + D + A V Sbjct: 207 WLGDQKNKMLQRVYGTAWHSSEALASYIHNMQEAEKRDHRKIAKDLGWFHIQNEALGQVF 266 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW 227 + + + I +HGY EV P+++ + +G KF ++MF D + Sbjct: 267 WHDKGWVIYRIIEEYIRCKLKKHGYLEVKTPIMLDRKLWEKSGHWEKFKENMFVVEDDKK 326 Query: 228 LIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + ++ ++ +I K LP+R R+E + G++R F + Sbjct: 327 ELAIKPMNCPCHVQIFKSKIRSYKELPIRMAEFGMCHRNEPSGSLY---GLMRVRGFTQD 383 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + E E R E+ K V L + E+W + Sbjct: 384 DAHIFCTHEQVRDEVLRFYELLMEVYKDFGFDSVTVKLSDR----PENRIGSDEIWDRSE 439 Query: 345 NLYRE 349 E Sbjct: 440 QSLME 444 >gi|222475619|ref|YP_002564036.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida] gi|255003612|ref|ZP_05278576.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Puerto Rico] gi|254783506|sp|B9KH76|SYT_ANAMF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|222419757|gb|ACM49780.1| Threonyl-tRNA synthetase (thrS) [Anaplasma marginale str. Florida] Length = 636 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 75/245 (30%), Gaps = 10/245 (4%) Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 ++ S S IH +E + D + A V Sbjct: 207 WLGDQKNKMLQRVYGTAWHSSEALASYIHNMQEAEKRDHRKIAKDLGWFHIQNEALGQVF 266 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW 227 + + + I +HGY EV P+++ + +G KF ++MF D + Sbjct: 267 WHDKGWVIYRIIEEYIRCKLKKHGYLEVKTPIMLDRKLWEKSGHWEKFKENMFVVEDDKK 326 Query: 228 LIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + ++ ++ +I K LP+R R+E + G++R F + Sbjct: 327 ELAIKPMNCPCHVQIFKSKIRSYKELPIRMAEFGMCHRNEPSGSLY---GLMRVRGFTQD 383 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + E E R E+ K V L + E+W + Sbjct: 384 DAHIFCTHEQVRDEVLRFYELLMEVYKDFGFDSVTVKLSDR----PENRIGSDEIWDRSE 439 Query: 345 NLYRE 349 E Sbjct: 440 QSLME 444 >gi|269958355|ref|YP_003328142.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel] gi|269848184|gb|ACZ48828.1| threonyl-tRNA synthetase [Anaplasma centrale str. Israel] Length = 636 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 74/245 (30%), Gaps = 10/245 (4%) Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 ++ S S IH +E + D + A V Sbjct: 207 WLGDQKNKMLQRVYGTAWHSSEALASYIHNMQEAEKRDHRKIAKDLGWFHIQNEALGQVF 266 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW 227 + + I +HGY EV P+++ + +G KF ++MF + + Sbjct: 267 WHDKGWVIYRTIEEYIRCKLEKHGYLEVKTPIMLDRKLWEKSGHWEKFKENMFVVENDKK 326 Query: 228 LIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + ++ ++ +I K LP+R R+E + G++R F + Sbjct: 327 ELAIKPMNCPCHVQIFKSKIRSYKELPIRMAEFGMCHRNEPSGSLY---GLMRVRGFTQD 383 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + E E R E+ K V L + E+W + Sbjct: 384 DAHIFCTHEQVRDEVLRFYELLMEVYKDFGFDSVTVKLSDR----PENRIGSDEIWDRSE 439 Query: 345 NLYRE 349 E Sbjct: 440 QSLME 444 >gi|210623612|ref|ZP_03293938.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275] gi|210153482|gb|EEA84488.1| hypothetical protein CLOHIR_01888 [Clostridium hiranonis DSM 13275] Length = 638 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 97/318 (30%), Gaps = 38/318 (11%) Query: 43 KIEDIRARRNSNSAQIGQAIAEG----NLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 +E + + + E + ++ + K +L E+ + Sbjct: 115 DLEALEKEMKKIAKE--DLKIERFELPREEAIKLMQEKGEDYKVELIEDLPEDAVISFYK 172 Query: 99 KKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 + + + P N +L R G EH Sbjct: 173 QGDFTDLCAGPHLLSTKKVKAVKLTSVAGAYWRGDENRKMLQRIYGVSFEKNKDLEEHLH 232 Query: 144 IGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 + E D + K G F ++ L+ AL ++ ++H Y E+ Sbjct: 233 MLEEAKKRDHRKLGKELGLFMIPEEGPGFPLMLPKGMALKNALLEYWREVH-RAAEYVEI 291 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 P+++ + +G + ++M+ + + P + Y E+ + P+ Sbjct: 292 ETPIILNRKLWETSGHWYHYKENMYTVKIDEEDYAIKPMNCPGGMLYYKSEMHSYRDFPM 351 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK- 311 R L R E A G++R F + + E E + ++S + I K Sbjct: 352 RVAELGRVHRHELSGALH---GLMRVRAFTQDDAHIFMLPEQIRDEIKGVISLIDGIYKT 408 Query: 312 -RLDLHYRVVSLCTGDLG 328 + H + + +G Sbjct: 409 FGFEYHLELSTRPEDSMG 426 >gi|18311304|ref|NP_563238.1| threonyl-tRNA synthetase [Clostridium perfringens str. 13] gi|110801319|ref|YP_697012.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|168205151|ref|ZP_02631156.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|168210374|ref|ZP_02635999.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|168213233|ref|ZP_02638858.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|168216713|ref|ZP_02642338.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|182625789|ref|ZP_02953556.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|22654117|sp|Q8XI02|SYT_CLOPE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123148532|sp|Q0TMX8|SYT_CLOP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|18145987|dbj|BAB82028.1| threonine-tRNA ligase [Clostridium perfringens str. 13] gi|110675966|gb|ABG84953.1| threonyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|170663286|gb|EDT15969.1| threonyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|170711530|gb|EDT23712.1| threonyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|170715283|gb|EDT27465.1| threonyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|177908945|gb|EDT71432.1| threonyl-tRNA synthetase [Clostridium perfringens D str. JGS1721] gi|182381219|gb|EDT78698.1| threonyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 643 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 105/358 (29%), Gaps = 41/358 (11%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTL 80 + +E S D ++ + + + ++ +K+E + Sbjct: 104 YDFDTEKPFSAD--------QLNKLEEEMKKIIKENPEIKRFELPRNEALELMKDEPYKV 155 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 + + E E + C + PI LSR Sbjct: 156 ELINDLPEGEVISFYQIGDFVDLCAGPHLMAVKPIKAVKLLRSTGAYWKGDEKNKMLSRV 215 Query: 141 HFEIGEALGLMD-----FDRATKLSGARFSVLTGHLAHLER----------------ALG 179 + +D + A K + G E Sbjct: 216 YGTAFPKKSELDAYLEALEEAKKRDHNKLGRELGIFTTDENVGQGLPLLMPKGARIIQTL 275 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT-SEVSLTN 238 Q I+ GY PL+ + + +G + D MF D + +T Sbjct: 276 QRWIEDEEQRRGYVLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDSEVFALRPMTC 335 Query: 239 -----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +Y+ + LP+RF + FR+E+ + G++R QF + + E Sbjct: 336 PFQYAIYNSTQHSYRDLPVRFAETSTLFRNESSG---EMHGLIRVRQFTLADGHIVCTPE 392 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 E + + + +++ L + + + D + D E W QN+ REI Sbjct: 393 QLEDEFKNTVDLVKYVMETLGIADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREI 450 >gi|15643503|ref|NP_228549.1| threonyl-tRNA synthetase [Thermotoga maritima MSB8] gi|8928373|sp|Q9WZJ9|SYT_THEMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|4981265|gb|AAD35821.1|AE001744_11 threonyl-tRNA synthetase [Thermotoga maritima MSB8] Length = 640 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 98/321 (30%), Gaps = 22/321 (6%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 ++ E + ++++ + +IK E++ R S + + + ++ L E Sbjct: 109 KNGRLTEEDLPKIEQEMKKIIK--ENLPIERKEISKEEARELFRDQPYKLE-LIEEIEGN 165 Query: 81 KEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 + + + ++ + + S +L R G + Sbjct: 166 RVTIYRQGEFVDLCRGPHLPSTGIVKHFKLLSVSGAYWRGSEKNPMLTRVYGTAFAKKED 225 Query: 138 SREHFEIGEALGLMDFDRATKLSG---------ARFSVLTGHLAHLERALGQFMIDLHTS 188 + + E D + + L +F +LH Sbjct: 226 LDNYLKFLEEAQRRDHRKLGPQLELFMLNTEYAPGMPFFLPKGVVVLNELMKFSRELH-R 284 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEII 245 E GY E+ PL++ ++ +G +A++M+ ++ +Y + Sbjct: 285 ERGYQEIFTPLIMNEQLWKISGHWDHYAENMYFIEKDEERYAVKPMNCPGHILVYKSRTV 344 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LPLRF R E G++R F + + + E +L Sbjct: 345 SYRDLPLRFFEFGRVHRYERSGVLH---GLMRVRSFTQDDAHIFCTPDQIEEEILGVLDL 401 Query: 306 AEEILKRLDLHYRVVSLCTGD 326 I + YRV + Sbjct: 402 INTIYSQFGFTYRVELSTMPE 422 >gi|323692292|ref|ZP_08106531.1| threonyl-tRNA synthetase [Clostridium symbiosum WAL-14673] gi|323503617|gb|EGB19440.1| threonyl-tRNA synthetase [Clostridium symbiosum WAL-14673] Length = 653 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 118/346 (34%), Gaps = 29/346 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETSTLKEQLPI 86 E + +L+++ + +IK+ + + + + + + + + E + L E E++ Sbjct: 113 EDLDNLEKEMKKIIKEGQKL--EKFTLTREAAIRLMEERDEPYKAELIQELPE-NEEISF 169 Query: 87 LEKEEHEVCSSLKKLISC------IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 + + + +++ L R G ++ Sbjct: 170 YRQGGDFTDLCAGPHLMSTKPIKAFKLISSSMAYWRGDSSKAQLQRIYGTAFASKEELNA 229 Query: 141 HFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + E E + D ++ + + G +L + + + L +++ DL +E G Sbjct: 230 YLEHLEDIKKRDHNKLGREMRLFTTVDVIGQGLPLLMPNGVKIVQRLQRWVEDLEDNEWG 289 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTNL-YSHEII 245 Y PL+ + + +G + D MF T + + Y ++ Sbjct: 290 YIRTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEETDKEVFALRPMTCPFQYYVYKNDQH 349 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LPLR++ + FR+E + G+ R QF E I R + E L Sbjct: 350 SYRELPLRYSETSTLFRNEDSG---EMHGLTRVRQFTISEGHLIIRPDQVEEELAGCLDL 406 Query: 306 AEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 A L L L V + D D E W Q R++ Sbjct: 407 AVHCLTTLGLQDDVTYRLSKWDPDNREKYLGDEEYWEKTQGKIRDL 452 >gi|56749447|sp|Q7MK65|SYT_VIBVY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 642 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 101/343 (29%), Gaps = 35/343 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D + + + +E I AR + + Q I + DA + T K ++ + Sbjct: 106 DIDLEESLTQEDLEKIEARMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENV 165 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR-------- 139 +++ ++ I + + + + + S + + Sbjct: 166 SRDDRPGLYHHEEYIDMCRGPHVPNMSFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFH 225 Query: 140 ------EHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------LH 186 +H E D + K + D Sbjct: 226 DKKALKDHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREK 285 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +E+GY EV PL++ +G K+AD MF T + P + +++ Sbjct: 286 LTEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQG 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E E + Sbjct: 346 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQDEVTNCI 402 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + V L T + E+W + Sbjct: 403 KMVYDTYQTFGFDNIAVKLSTR----PEQRVGSDEIWDQSEEA 441 >gi|27365716|ref|NP_761244.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|31340449|sp|Q8DA13|SYT_VIBVU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|27361865|gb|AAO10771.1| threonyl-tRNA synthetase [Vibrio vulnificus CMCP6] Length = 642 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 101/343 (29%), Gaps = 35/343 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D + + + +E I AR + + Q I + DA + T K ++ + Sbjct: 106 DIDLEESLTQEDLEKIEARMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENV 165 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR-------- 139 +++ ++ I + + + + + S + + Sbjct: 166 SRDDRPGLYHHEEYIDMCRGPHVPNMSFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFH 225 Query: 140 ------EHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------LH 186 +H E D + K + D Sbjct: 226 DKKALKDHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREK 285 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +E+GY EV PL++ +G K+AD MF T + P + +++ Sbjct: 286 LTEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQG 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E E + Sbjct: 346 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQDEVTNCI 402 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + V L T + E+W + Sbjct: 403 KMVYDTYQTFGFDNIAVKLSTR----PEQRVGSDEIWDQSEEA 441 >gi|309776920|ref|ZP_07671890.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308915331|gb|EFP61101.1| threonine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 580 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 106/334 (31%), Gaps = 27/334 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++++ + + + R R S + + + +D +++ Sbjct: 60 EDLAKIEKEMKKI--AKDGKRIVRKEISKDEAMEMFKDDPYKMDLIRDLADGTITCYQQG 117 Query: 88 EKEEHEVCSSLK--KLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 E + + K + + A+ +L R G EH + Sbjct: 118 EFIDLCRGPHVDTVKQLKNFKLLKHSGAYWKGDASNKMLQRIYGICFPTAEELEEHLHLL 177 Query: 146 EALGLMDFDR--------ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 E D + + + L F + HT E+ Y + Sbjct: 178 EEAKKRDHKKLGRELGLFMMSEYAPGMPFFLPNGMIIRNLLENFWYEEHTKEN-YQFIKT 236 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 P+++ E +G + ++M+ T + P + ++ + + K LPLR Sbjct: 237 PIMMSKELWEVSGHWENYKENMYTTMVDDREFAIKPMNCPGSLLVFKNGLHSYKDLPLRM 296 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 L R EA A G+ R F + + R + E R++ + + Sbjct: 297 GELGQVHRHEASGAL---NGLFRVRTFTQDDAHIFMRPDQIEGEVMRLIQFIDRVYSVFG 353 Query: 315 LHYRVVSLCTGDLGFSACKTY--DLEVWLAGQNL 346 L YR+ +L K Y DL +W + Sbjct: 354 LSYRI------ELSTRPEKKYIGDLAIWEQSEKA 381 >gi|37680129|ref|NP_934738.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016] gi|37198875|dbj|BAC94709.1| threonyl-tRNA synthetase [Vibrio vulnificus YJ016] Length = 655 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 101/343 (29%), Gaps = 35/343 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D + + + +E I AR + + Q I + DA + T K ++ + Sbjct: 119 DIDLEESLTQEDLEKIEARMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENV 178 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR-------- 139 +++ ++ I + + + + + S + + Sbjct: 179 SRDDRPGLYHHEEYIDMCRGPHVPNMSFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFH 238 Query: 140 ------EHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------LH 186 +H E D + K + D Sbjct: 239 DKKALKDHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREK 298 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +E+GY EV PL++ +G K+AD MF T + P + +++ Sbjct: 299 LTEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQG 358 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E E + Sbjct: 359 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQDEVTNCI 415 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + V L T + E+W + Sbjct: 416 KMVYDTYQTFGFDNIAVKLSTR----PEQRVGSDEIWDQSEEA 454 >gi|110802298|ref|YP_699583.1| threonyl-tRNA synthetase [Clostridium perfringens SM101] gi|123047184|sp|Q0SQM4|SYT_CLOPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|110682799|gb|ABG86169.1| threonine--tRNA ligase [Clostridium perfringens SM101] Length = 643 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 105/358 (29%), Gaps = 41/358 (11%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTL 80 + +E S D ++ + + + ++ +K+E + Sbjct: 104 YDFDTEKSFSAD--------QLNKLEEEMKKIIKENPEIKRFELPRNEALELMKDEPYKV 155 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 + + E E + C + PI LSR Sbjct: 156 ELINDLPEGEVISFYQIGDFVDLCAGPHLMAVKPIKAVKLLRSTGAYWKGDEKNKMLSRV 215 Query: 141 HFEIGEALGLMD-----FDRATKLSGARFSVLTGHLAHLER----------------ALG 179 + +D + A K + G E Sbjct: 216 YGTAFPKKSELDAYLEALEEAKKRDHNKLGRELGIFTTDENVGQGLPLLMPKGARIIQTL 275 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT-SEVSLTN 238 Q I+ GY PL+ + + +G + D MF D + +T Sbjct: 276 QRWIEDEEQRRGYVLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDSEVFALRPMTC 335 Query: 239 -----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +Y+ + LP+RF + FR+E+ + G++R QF + + E Sbjct: 336 PFQYAIYNSTQHSYRDLPVRFAETSTLFRNESSG---EMHGLIRVRQFTLADGHIVCTPE 392 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 E + + + +++ L + + + D + D E W QN+ REI Sbjct: 393 QLEDEFKNTVDLVKYVMETLGIADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREI 450 >gi|89071308|ref|ZP_01158467.1| threonyl-tRNA synthetase [Oceanicola granulosus HTCC2516] gi|89043173|gb|EAR49409.1| threonyl-tRNA synthetase [Oceanicola granulosus HTCC2516] Length = 654 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 59/442 (13%), Positives = 118/442 (26%), Gaps = 73/442 (16%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + ++++K R +I K + +R I V+ Sbjct: 114 DRAEPFTPEDLGAIEKKMREIINKRDPVRTETWERDRAIAHYRDNDEPYKVE-------- 165 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK-------- 131 L E +P E + L +VP ++ Sbjct: 166 LIESIPGSEPIRMYWHGDWQDLCRGPHLQHTGQVPGDAFKLMSVAGAYWRGDSSRAMLQR 225 Query: 132 ------------PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + +H E + + D + A V Sbjct: 226 IYGAAFLTRDALKAHLHRLEEAQKRDHRKLGREMDLFHMQAEAPGQVFWHPNGWTVYTTL 285 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVS 235 Q + GY E++ P +V + +G K+ D MF + + Sbjct: 286 QDYMRRKQRAGGYREINTPQVVDRKLWEASGHWDKYQDHMFIVEVDEEHAQEKAINALKP 345 Query: 236 LTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + ++ + LPLR R E A G++R F + + Sbjct: 346 MNCPCHVQVFNQGLKSYRDLPLRLAEFGSCSRYEPSGALH---GIMRVRGFTQDDAHIFC 402 Query: 291 REEDSFTEHERMLSCAEEILKRLDLH-YRVVSLCTGDLGFSACKTYD------------- 336 E+ E R ++ I + L + + + + ++D Sbjct: 403 TEDQIEAECARFINFLAGIYEDLGFPTFEIKFATRPEKRVGSDASWDHVENALESAIRAT 462 Query: 337 --LEVWLAGQNLYR----------EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFT 379 G + I CG FQ R+ + Y + + Sbjct: 463 GRTYTLEPGDGAFYGPKLDFYLTDAIGRTWQCGTFQVDPNLPERLGATYIGEDGAKHR-P 521 Query: 380 HTLN-GSGVAVGRCLIAILENY 400 + L+ + + R + ++E + Sbjct: 522 YMLHRATLGSFERFIGILIEEH 543 >gi|121594741|ref|YP_986637.1| threonyl-tRNA synthetase [Acidovorax sp. JS42] gi|166223314|sp|A1W8I6|SYT_ACISJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120606821|gb|ABM42561.1| Ser-tRNA(Thr) hydrolase [Acidovorax sp. JS42] Length = 639 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV P ++ TG K+ D+MF Sbjct: 258 HSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILDKTLWEKTGHWDKYRDNMF 317 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T L P + ++ I + LPLR+ R+E G++R Sbjct: 318 TTESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E+ E + +++ K H + + T + Sbjct: 375 VRGFTQDDGHIFCTEDHILAECTAYTALLQKVYKDFGFHNIIYKVATR----PEARIGSD 430 Query: 338 EVWLAGQNLYREISSCSTCG 357 E W ++ E S C Sbjct: 431 ESWDKAEHALMESLRASGCE 450 >gi|50952758|gb|AAT90291.1| putative threonyl-tRNA synthetase [uncultured proteobacterium eBACred25D05] Length = 650 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 94/310 (30%), Gaps = 24/310 (7%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++ K R +I + +R I A+ ++ + ++ Sbjct: 118 EDLGKIERKMREIINLRDVVRTELWDREKAIEYYTAKKEPYKIELIDAIPENDNIRMYWH 177 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEV-----PIGTSANENILIRSVGKKPSAIHLSREHF 142 + + + +P + + +N +L R G REH Sbjct: 178 GDWQDLCRGPHFQNTAQVPADAFKLMSVAGAYWRGDSNRQMLQRIYGVAFLNKENLREHL 237 Query: 143 EIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 + E D + K A + L Q + GY EV Sbjct: 238 NMLEEAAKRDHRKLGKEMDLFHMQEEAPGQIFWHPNGWKIYTLLQDYMRRQQEVGGYVEV 297 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNL-----YSHEIIE 246 + P +V + +G K+ + MF R + + Y+ I Sbjct: 298 NTPQVVDRKLWEESGHWDKYQEHMFIVEVDEEHAREKSINALKPMNCPCHVQVYNQGIKS 357 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LPLR R E A G++R F + + +E+ +E ++ ++ Sbjct: 358 YRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDAHIFCQEDQIESETKKFINFL 414 Query: 307 EEILKRLDLH 316 + K L Sbjct: 415 SGVYKDLGFP 424 >gi|320156122|ref|YP_004188501.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] gi|319931434|gb|ADV86298.1| threonyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] Length = 642 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 98/343 (28%), Gaps = 35/343 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D + + + +E I AR + + Q I + DA + T K ++ + Sbjct: 106 DIDLEESLTQEDLEKIEARMKALAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENV 165 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR-------- 139 +++ ++ I + + + + + S + + Sbjct: 166 SRDDRPGLYHHEEYIDMCRGPHVPNMSFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFH 225 Query: 140 ------EHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMIDLHTSEHG- 191 +H E D + K + DL Sbjct: 226 DKKALKDHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIREK 285 Query: 192 -----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 Y EV PL++ +G K+AD MF T + P + +++ Sbjct: 286 LAEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQG 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E E + Sbjct: 346 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQDEVTNCI 402 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + V L T + E+W + Sbjct: 403 KMVYDTYQTFGFDNIAVKLSTR----PEQRVGSDEIWDQSEEA 441 >gi|78778982|ref|YP_397094.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus marinus str. MIT 9312] gi|123755107|sp|Q31BT7|SYT_PROM9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78712481|gb|ABB49658.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus marinus str. MIT 9312] Length = 638 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 101/337 (29%), Gaps = 30/337 (8%) Query: 28 EYILSLDEKNRILIK---KIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETST--LK 81 E ++ ++ + LIK +E ++ S + + E + + + E L Sbjct: 115 EDLIKIENRINKLIKTNYDVEILQ-----VSKEEAIKTFKERDETFKLRIIEEIPEEGLI 169 Query: 82 EQLPILEKEEHEVCSS--LKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 E + + + + L ++ L R G + + Sbjct: 170 NLYKHEEYIDMCRGPHVPNTRHLRHFKLLKLSGSYWRGNSENEALQRIYGTAWAKEKELK 229 Query: 140 EHFEIGEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 ++ E D + K + + + + I ++ Y Sbjct: 230 DYLTRIEEAEKRDHRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDY 289 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKS 249 E+ P V +G KF DDMF T ++ L++ + K Sbjct: 290 LEIKTPQAVDKSLWEKSGHWEKFRDDMFTTASENRTYAIKPMNCPCHIQLFNQGLKSYKD 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R R+E A G++R F + + +EE E + E+ Sbjct: 350 LPIRLAEFGSCHRNEPSGALH---GLMRVRNFTQDDAHIFCKEEQIQEEVSTFIDLVFEV 406 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 K ++ L T + E+W + Sbjct: 407 YKTFGFDEIIIKLSTR----PEKRVGSEEIWDKSEEA 439 >gi|282855610|ref|ZP_06264924.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455] gi|282586540|gb|EFB91794.1| threonine--tRNA ligase [Pyramidobacter piscolens W5455] Length = 640 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 100/342 (29%), Gaps = 30/342 (8%) Query: 27 SEYIL-SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLP 85 SE IL +L+++ R + K+ +R R + I + E N + L Sbjct: 110 SEEILPALEKEMRRIAKRSIPLRRERVGVADAI-KLFRERNDPYKVEILEGVGDETVNLY 168 Query: 86 ILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHF 142 + + + + + + +L R G + + Sbjct: 169 WQDDYVDLCRGPHVPNTRFLKHFKLLSMAGAYWRGDEHNIMLTRIYGTAFNTQEELDAYI 228 Query: 143 EIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 E D + K F + L F LH +GYTE Sbjct: 229 TRMEEARRRDHRKLGKELDLFSLHNEGVGFPFFHPKGMVVMNKLMSFWRRLH-FLNGYTE 287 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV---SLTNLYSHEIIESKSLP 251 P ++ + +G + ++M+ TT + +Y + LP Sbjct: 288 ARTPQILNRDLWLRSGHWDHYRENMYFTTIDDIPHAIKPMNCPGGIIIYKTSKHSYRELP 347 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 +R L R E A G++R F + + E E + ++ + + Sbjct: 348 IRMGELGVVHRHELSGALH---GLMRVRCFTQDDAHHFCTPEQIKDEVKLIMKLNDYVYT 404 Query: 312 ---RLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 H + + +G E+W +N E Sbjct: 405 HVFGFKYHVELSTRPENSMG-------SDELWEIAENALSET 439 >gi|307719284|ref|YP_003874816.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] gi|306533009|gb|ADN02543.1| threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] Length = 578 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 89/310 (28%), Gaps = 32/310 (10%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++E R I+ ED+ R S + + + + ++ L + E + Sbjct: 53 EDLEKIEELMRKTIE--EDLPFEREVISREEARELFKDQPYKLEIL----EEIPEGEEVS 106 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPI------------GTSANENILIRSVGKKPSAI 135 + + + + P + Sbjct: 107 IYRHGTFVDLCRGPHVERTGQINPDAVKLLSIAGAYWRGDERRPMLQRIYGTAWHTPKEL 166 Query: 136 HLSREHFEIGEALG------LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 EH + E +D + +G A + + F + H Sbjct: 167 RQYLEHLKEVEKRDHRRLGKELDLFSVHEEAGPGLIYWHPKGARIRLEIENFWREQHL-A 225 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSLTNLYSHEII 245 GY + P + + +G + + ++M+ + ++ P + +Y + Sbjct: 226 RGYEVLYTPHIGKAWLWETSGHLSFYKENMYAPMEVDKSDYYIKPMNCPFHIMIYKTRLR 285 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LPLR+ L +R E G+LR F + + E E L Sbjct: 286 SYRELPLRWAELGTVYRYERSGVLH---GLLRVRGFTQDDAHIFCTPEQIEDEILETLRF 342 Query: 306 AEEILKRLDL 315 + + + Sbjct: 343 SLFMWETFGF 352 >gi|167648480|ref|YP_001686143.1| threonyl-tRNA synthetase [Caulobacter sp. K31] gi|189083602|sp|B0T0Z7|SYT_CAUSK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167350910|gb|ABZ73645.1| threonyl-tRNA synthetase [Caulobacter sp. K31] Length = 659 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 66/428 (15%), Positives = 117/428 (27%), Gaps = 52/428 (12%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R + + ++E+ R ++ + E IR A I A G +++ ++ Sbjct: 113 RDEPFSLDDLPKIEERMRQIVDRDEKIRREEVDRDAAIADFEAMGESYKAQIIRDLPASD 172 Query: 81 KEQLPILEKEEH-----EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 + ++ S K + L N L R G + Sbjct: 173 TITVYHQGEKWKDLCRGPHLPSTKAVGKAFKLTKLAGAYWRGDQNNAQLQRIYGTSWATE 232 Query: 136 HLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTS 188 H + E D + K + V + + Sbjct: 233 ADLEAHLKRIEEAERRDHRKLGKTMDLFHIQEEGKGMVFWHPKGWTLYLALEAYMRRRLD 292 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEII--- 245 GY EV P ++ +G KF MF + + + Sbjct: 293 AAGYREVKTPQILDKSLWERSGHAEKFGHAMFMCESAEGEVLAVKPMNCPGHIQIFNVGQ 352 Query: 246 -ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LPLR R E A G++R F + + REE E R + Sbjct: 353 KSYRELPLRMAEFGACHRYEPSGA---MHGIMRVRAFTQDDAHIFCREEQVTEESARFIE 409 Query: 305 CAEEILKRLDLHY-RVVSLCTGDLGFSACKTYD---------------LEVWLAGQNLY- 347 + L +H +L +D V G+ + Sbjct: 410 LLRSVYSDLGMHLADTKFSTRPELRAGEDAVWDKAEAALSAAAEAAGETLVLQEGEGAFY 469 Query: 348 ---RE------ISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRC 392 E I CG Q R+++ Y + + L+ + + R Sbjct: 470 GPKLEFSLKDAIGRVWQCGTLQLDFVLPERLDAEYVAEDGSKKRPV-MLHRAILGSFERF 528 Query: 393 LIAILENY 400 + +LENY Sbjct: 529 IGILLENY 536 >gi|300716458|ref|YP_003741261.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661] gi|299062294|emb|CAX59411.1| Threonyl-tRNA synthetase [Erwinia billingiae Eb661] Length = 642 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 88/312 (28%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + IE + R + + I + ++ A + ET + + Sbjct: 105 DVDIDRTLTQEDIEQLEKRMHQLAETNYDVIKKKVSWQEARDAFAARGETYKITILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + + S + + + A Sbjct: 165 SHDDQPGLYHHEEYVDMCRGPHVPNMRFCHHFKLQKISGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKQLAAYLLRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +E+ Y EV PL++ TG + + MF T + P + +++ Sbjct: 285 LTEYDYQEVKGPLMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE TE + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQVRTEVNSCI 401 Query: 304 SCAEEILKRLDL 315 ++ Sbjct: 402 RMVYDMYSTFGF 413 >gi|289578715|ref|YP_003477342.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289528428|gb|ADD02780.1| threonyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 635 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 97/311 (31%), Gaps = 24/311 (7%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETSTLKE 82 +E +++++ +IK+ + R + + E + L E E Sbjct: 110 PFTTEDFEAIEQEMNKIIKEDYKL--ERFVLPKDEAIKLMEEKDEPYKVELIKEIPE-GE 166 Query: 83 QLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 ++ ++ E ++ I + + +L R G + Sbjct: 167 EISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSM 226 Query: 138 SREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSE 189 E+ + E D + K F + L F H + Sbjct: 227 LDEYLHMLEEAKKRDHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEH-MK 285 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIE 246 HGY E+ P+++ +E +G + ++M+ T + + P + +Y + Sbjct: 286 HGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEIDGETYAIKPMNCPGAMLVYKSTMHS 345 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LPLR L R E G++R F + + E E +++ Sbjct: 346 YRDLPLRLCELGLVHRHELSGVLH---GLMRVRSFTQDDAHLFMTPEQVEDEILGVINLV 402 Query: 307 EEILKRLDLHY 317 + K Y Sbjct: 403 DYFYKIFGFEY 413 >gi|225574947|ref|ZP_03783557.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM 10507] gi|225037794|gb|EEG48040.1| hypothetical protein RUMHYD_03026 [Blautia hydrogenotrophica DSM 10507] Length = 667 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 79/215 (36%), Gaps = 10/215 (4%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + M+ + G +L + + L +++ DL +E GY PL+ + Sbjct: 256 DHNKLGREMELFTTVDVIGQGLPLLMPKGVIILKELQRWIEDLEDNEWGYIRTKTPLMAK 315 Query: 203 DEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTNL-YSHEIIESKSLPLRFTT 256 + +G + D MF + + Y + LPLR++ Sbjct: 316 SDLYKISGHWDHYKDGMFVLGDEEKDKEVYALRPMTCPFQYYVYKASQHSYRELPLRYSE 375 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 + FR+E + G+ R QF E ITR + E ++ + A+ +L L L Sbjct: 376 TSTLFRNEDSG---EMHGLTRVRQFTITEAHLITRPDQIDEEFKKCVQLAKFVLTTLGLQ 432 Query: 317 YRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 V + D + D + W QN RE+ Sbjct: 433 DDVTYRLSKWDPNNTEKYIGDAQYWETSQNKMREL 467 >gi|222110646|ref|YP_002552910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY] gi|254783520|sp|B9MHX8|SYT_DIAST RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|221730090|gb|ACM32910.1| threonyl-tRNA synthetase [Acidovorax ebreus TPSY] Length = 639 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV P ++ TG K+ D+MF Sbjct: 258 HSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILDKTLWEKTGHWDKYRDNMF 317 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T L P + ++ I + LPLR+ R+E G++R Sbjct: 318 TTESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E+ E + +++ K H + + T + Sbjct: 375 VRGFTQDDGHIFCTEDHILAECTAYTALLQKVYKNFGFHNIIYKVATR----PEARIGSD 430 Query: 338 EVWLAGQNLYREISSCSTCG 357 E W ++ E S C Sbjct: 431 ESWDKAEHALMESLRASGCE 450 >gi|161524952|ref|YP_001579964.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189350300|ref|YP_001945928.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|238687005|sp|A9ABF9|SYT_BURM1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160342381|gb|ABX15467.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189334322|dbj|BAG43392.1| threonyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] Length = 635 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 63/202 (31%), Gaps = 14/202 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + EE E A + + + + L L Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQIIAESIAFNKLAMSVYRDFGFDHIDIKLS---L 421 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 D E W + RE Sbjct: 422 RPEQRMGSD-ETWDRAEQGLRE 442 >gi|312876378|ref|ZP_07736363.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311796872|gb|EFR13216.1| threonyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 647 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 53/390 (13%), Positives = 122/390 (31%), Gaps = 59/390 (15%) Query: 23 LEPQSEY------ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 + E + ++E+ + +IK ED++ R S + V ++ + Sbjct: 107 YDFDVEESITMELLEKIEEEMQKIIK--EDLKIERFELSRE----------ESVKLMQEK 154 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANE 121 K +L E + + + P ++ Sbjct: 155 GENYKVELINDIPEGETISFYRQGEFVDLCTGPHLPSTGRVKAFKLLSVAGAYWRGNSKN 214 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-- 176 +L R G E+ + E D +R + + V G + + Sbjct: 215 KMLQRIYGISFEKKSELDEYLKKLEEAKKRDHNRIGRELEIFTTSEVVGQGLPLLMPKGA 274 Query: 177 ---ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSE 233 + Q ++ + GY P + + + +G + D MF + + Sbjct: 275 KILQILQRFVEDEEEKRGYLLTKTPYMAKSDLYKISGHWDHYRDGMFVIEEDENEVLALR 334 Query: 234 VSLTN----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 +Y+ + + LP+R++ + FR+E+ + G++R QF + I Sbjct: 335 PMTCPFQFLIYNSKQRSYRDLPIRYSETSTLFRNESSG---EMHGLIRVRQFTLSDAHII 391 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHY-RVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 R + E + +L + I+K L + D + E W +N + Sbjct: 392 CRPDQVEEEFKGVLDLIQYIMKTLGIENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMK 451 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 + ++ Y++ ++ + Sbjct: 452 ------NILD----KLGINYKEAKGEAAFY 471 >gi|300311294|ref|YP_003775386.1| threonyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300074079|gb|ADJ63478.1| threonyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 635 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 82/290 (28%), Gaps = 53/290 (18%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + ++GY EV AP ++ TG Sbjct: 250 LDLFHFQDEAPGLIFWHPKGWTIWQQVEQYMRRVYQDNGYQEVKAPQILDRSLWEKTGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T ++ +++ + + LPLR+ R+E A Sbjct: 310 ENYRENMFTTESENRAYALKPMNCPGHIQIFNSGLHSYRDLPLRYGEFGQCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 GM+R F + + E+ E E+ V L Sbjct: 370 H---GMMRVRGFTQDDGHIFCTEDQIQEEVAAFNRVVREVYDCFGFKEVAVKLALR---- 422 Query: 330 SACKTYDLEVWLAGQNLYREISSCS------------------------------TCGNF 359 + EVW +N RE S CG Sbjct: 423 PEKRIGAEEVWDKAENALREAIRASGSEWEELPGEGAFYGPKIEYHLKDSIGRSWQCGTM 482 Query: 360 Q-----SRRMNSRYRDPNSKSLKFTHTLN----GSGVAVGRCLIAILENY 400 Q R+ + Y ++ L+ GS R + ++EN+ Sbjct: 483 QVDFSMPARLGAEYVTEDNNRKVPV-MLHRAIVGSL---ERFIAILIENH 528 >gi|312794079|ref|YP_004027002.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181219|gb|ADQ41389.1| threonyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 647 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 127/380 (33%), Gaps = 39/380 (10%) Query: 23 LEPQSEY------ILSLDEKNRILIKKIEDIRARRNSNS-AQIGQAIAEGNLSLVDALKN 75 + E + ++E+ + +IK ED++ R S + + + E + L N Sbjct: 107 YDFDVEESITMELLEKIEEEMQKIIK--EDLKIERFELSRKEAVKLMQEKGENYKVELIN 164 Query: 76 ETSTLKEQLPILEKEEHEVCS----SLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK 131 + + + E ++C+ + + + ++ +L R G Sbjct: 165 DIPEGETISFYRQGEFVDLCTGPHLPSTGRVKAFKLLSVAGAYWRGNSKNKMLQRIYGIS 224 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-----ALGQFMI 183 E+ + E D +R + + V G + + + Q + Sbjct: 225 FEKKSELDEYLKKLEEAKKRDHNRIGRELEIFTTSEVVGQGLPLLMPKGAKILQILQRFV 284 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN----L 239 + + GY P + + + +G + D MF + + + Sbjct: 285 EDEEEKRGYLLTKTPYMAKSDLYKISGHWDHYRDGMFVIEEDENEVLALRPMTCPFQFLI 344 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ + + LP+R++ + FR+E+ + G++R QF + I R + E Sbjct: 345 YNSKQRSYRDLPIRYSETSTLFRNESSG---EMHGLIRVRQFTLSDAHIICRPDQVEEEF 401 Query: 300 ERMLSCAEEILKRLDLHY-RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGN 358 + +L + I+K L + D + E W +N + + Sbjct: 402 KGVLDLIQYIMKTLGIENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMK------NILD 455 Query: 359 FQSRRMNSRYRDPNSKSLKF 378 ++ Y++ ++ + Sbjct: 456 ----KLGINYKEAKGEAAFY 471 >gi|169347105|ref|ZP_02866047.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|169296788|gb|EDS78917.1| threonyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] Length = 643 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 105/358 (29%), Gaps = 41/358 (11%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTL 80 + +E S D ++ + + + ++ +++E + Sbjct: 104 YDFDTEKPFSAD--------QLNKLEEEMKKIIKENPEIKRFELPRNEALELMRDEPYKV 155 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 + + E E + C + PI LSR Sbjct: 156 ELINDLPEGEVISFYQIGDFVDLCAGPHLMAVKPIKAVKLLRSTGAYWKGDEKNKMLSRV 215 Query: 141 HFEIGEALGLMD-----FDRATKLSGARFSVLTGHLAHLER----------------ALG 179 + +D + A K + G E Sbjct: 216 YGTAFPKKSELDAYLEALEEAKKRDHNKLGRELGIFTTDENVGQGLPLLMPKGARIIQTL 275 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT-SEVSLTN 238 Q I+ GY PL+ + + +G + D MF D + +T Sbjct: 276 QRWIEDEEQRRGYVLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDSEVFALRPMTC 335 Query: 239 -----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +Y+ + LP+RF + FR+E+ + G++R QF + + E Sbjct: 336 PFQYAIYNSTQHSYRDLPVRFAETSTLFRNESSG---EMHGLIRVRQFTLADGHIVCTPE 392 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 E + + + +++ L + + + D + D E W QN+ REI Sbjct: 393 QLEDEFKNTVDLVKYVMETLGIADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREI 450 >gi|330836194|ref|YP_004410835.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329748097|gb|AEC01453.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 588 Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 8/168 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D + +G A + A+ F D H ++GY V +P + R +G Sbjct: 200 DLFSLHEEAGPGLVYWHPRGARVRVAIENFWRDEH-YKNGYEMVFSPHVGRSWLWETSGH 258 Query: 212 IPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + + D M+ + ++ P + +Y++ + LP+R L +R E Sbjct: 259 LGFYKDSMYPAMEMDKSDYYVKPMNCPFHIMIYNNSKRSYRDLPIRMAELGTVYRYEKAG 318 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E E ++L + +L+ Sbjct: 319 ALH---GLMRVRGFTQDDAHLFCTPEQMDDEIRKVLEFSLYMLRSFGF 363 >gi|315186787|gb|EFU20545.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 578 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 90/310 (29%), Gaps = 32/310 (10%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++E R I+ ED+ +R S + + + + ++ L + E + Sbjct: 53 EDLEKIEELMRKTIE--EDLPFKREVISREEARELFKDQPYKLEIL----EEIPEGEEVS 106 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPI------------GTSANENILIRSVGKKPSAI 135 + + + + P + Sbjct: 107 IYRHGTFVDLCRGPHVERTGQINPDAVKLLSIAGAYWRGDERRPMLQRIYGTAWHTPKEL 166 Query: 136 HLSREHFEIGEALG------LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 EH + E +D + +G A + + F + H Sbjct: 167 RQYLEHLKEVEKRDHRRLGKELDLFSVHEEAGPGLIYWHPKGARIRLEIENFWREQHL-A 225 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSLTNLYSHEII 245 GY + P + + +G + + ++M+ + ++ P + +Y + Sbjct: 226 RGYEVLYTPHIGKAWLWETSGHLSFYKENMYAPMEVDKSDYYIKPMNCPFHIMIYKTRLR 285 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LPLR+ L +R E G+LR F + + E E L Sbjct: 286 SYRELPLRWAELGTVYRYERSGVLH---GLLRVRGFTQDDAHIFCTPEQIEDEILETLRF 342 Query: 306 AEEILKRLDL 315 + + K Sbjct: 343 SLFMWKTFGF 352 >gi|83647272|ref|YP_435707.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396] gi|123753567|sp|Q2SDJ2|SYT_HAHCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|83635315|gb|ABC31282.1| threonyl-tRNA synthetase [Hahella chejuensis KCTC 2396] Length = 637 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 60/193 (31%), Gaps = 10/193 (5%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + +H Y E+ P +V +G KF Sbjct: 254 HMQEEAPGMVFWHSDGWTLYQVIEQYMRKQLRKHDYKEIKTPQVVERTLWEKSGHWEKFR 313 Query: 217 DDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 DDMF T ++ +++ + + LPLR R+EA A Sbjct: 314 DDMFTTQSEDRDFAIKPMNCPCHVQVFNQGLRSYRDLPLRLAEFGSCHRNEASGALH--- 370 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 G++R F + + EE E + + E+ + L T + Sbjct: 371 GLMRVRGFTQDDAHIFCTEEQIQEEVGKFIDFLHEVYADFGFSEIIYKLSTR----PEKR 426 Query: 334 TYDLEVWLAGQNL 346 E+W + Sbjct: 427 VGSDEIWDKSEKA 439 >gi|197301753|ref|ZP_03166823.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC 29176] gi|197299193|gb|EDY33723.1| hypothetical protein RUMLAC_00479 [Ruminococcus lactaris ATCC 29176] Length = 655 Score = 60.9 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 108/350 (30%), Gaps = 28/350 (8%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLK 81 E + L+ + + +IK+ +++ R + + + L + Sbjct: 108 EPFSRETLDKLEAEMKKIIKEGHELK--RYTLPREEAIKFMQEKNEPFKVELIEDLPE-G 164 Query: 82 EQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 E++ ++ E K I +++ L R G + Sbjct: 165 EEISFYDQGEFVDLCAGPHLMTTKGIKAFKLTSSSMAYWRGDSDKARLQRIYGTAFNKKE 224 Query: 137 LSREHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHT 187 + E E D ++ + + G + + L +++ DL Sbjct: 225 ELNAYLEKLEDAKRRDHNKLGREMELFTTVDVIGQGLPLFPPKGTKMIMKLQRWIEDLED 284 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTNL-YS 241 E GY PL+ + + +G + + MF + + Y Sbjct: 285 KEWGYVRTRTPLMAKSDLYKISGHWDHYKEGMFVLGDEEKDKEVFALRPMTCPFQYYVYK 344 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + + LP R + + FRSE + G+ R QF E ++ R + + E + Sbjct: 345 NTQKSYRDLPYRMSETSTLFRSEDSG---EMHGLTRVRQFTITEAHNVIRPDQAEEELKN 401 Query: 302 MLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 A +L L L V + D D + W Q RE+ Sbjct: 402 CFDLAYYVLSTLGLQDDVTYRLSKWDPANKKKYLGDEDYWNRTQEALREV 451 >gi|269214426|ref|ZP_05986526.2| threonine--tRNA ligase [Neisseria lactamica ATCC 23970] gi|269209844|gb|EEZ76299.1| threonine--tRNA ligase [Neisseria lactamica ATCC 23970] Length = 643 Score = 60.9 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 256 LDLFHLQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 315 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 316 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 375 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 376 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 429 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D EVW + RE Sbjct: 430 GKRAGSD-EVWDKAEQGLRE 448 >gi|123968188|ref|YP_001009046.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] gi|166225480|sp|A2BQ78|SYT_PROMS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123198298|gb|ABM69939.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] Length = 638 Score = 60.9 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 91/306 (29%), Gaps = 26/306 (8%) Query: 28 EYILSLDEKNRILIK---KIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETST--LK 81 E ++ ++ + LIK +E ++ S + + E + + + E L Sbjct: 115 EDLIKIENRINQLIKTNYDVEILQ-----VSKEEAIKTFKERDETFKLRIIEEIPEEGLI 169 Query: 82 EQLPILEKEEHEVCSS--LKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 E + + + + L ++ L R G + + Sbjct: 170 NLYKHEEYIDMCRGPHVPNTRHLRHFKLLKLSGSYWRGNSENESLQRIYGTAWAKEKELK 229 Query: 140 EHFEIGEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 ++ E D + K + + + + I ++ Y Sbjct: 230 DYLTRIEEAEKRDHRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDY 289 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKS 249 E+ P V +G KF DDMF T ++ +++ + K Sbjct: 290 LEIKTPQAVDKSLWEKSGHWEKFRDDMFTTASENRTYAIKPMNCPCHIQIFNQGLKSYKD 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R R+E A G++R F + + EE E + E+ Sbjct: 350 LPIRLAEFGSCHRNEPSGALH---GLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEV 406 Query: 310 LKRLDL 315 K Sbjct: 407 YKTFGF 412 >gi|260219598|emb|CBA26443.1| Threonyl-tRNA synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 665 Score = 60.9 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 67/202 (33%), Gaps = 11/202 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV P ++ TG K+ ++MF Sbjct: 287 HSPGTVFWHPKGWTLWQGVEQYMRKVYQDNGYLEVKGPQIIDKSLWEKTGHWDKYRENMF 346 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T L P + +Y I + LPLRF R+E G++R Sbjct: 347 TTESEKRDYALKPMNCPGHILIYKQGIKSYRDLPLRFGEFGQCHRNEPSGGLH---GIMR 403 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E+ E + + +++ K + L T + Sbjct: 404 VRAFTQDDGHIFCTEDQIQDEVKAFTTLLQKVYKDFGFTNIIYKLSTR----PEKRIGTE 459 Query: 338 EVWLAGQNLYREISSCSTCGNF 359 E W +N E S C +F Sbjct: 460 EGWDRAENALAEGLRASGC-DF 480 >gi|157413014|ref|YP_001483880.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] gi|166987324|sp|A8G3W3|SYT_PROM2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157387589|gb|ABV50294.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] Length = 638 Score = 60.9 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 98/332 (29%), Gaps = 20/332 (6%) Query: 28 EYILSLDEKNRILIK---KIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 E ++ ++ + LIK +E ++ + + L +++ + E + Sbjct: 115 EDLIKIENRINKLIKTNYDVEILQVSKKEAIKTFKERDETFKLRIIEDIPEEGLINLYKH 174 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 + + + L ++ L R G + ++ + Sbjct: 175 EEYIDMCRGPHVPNTRHLRHFKLLKLSGSYWRGNSENESLQRIYGTAWAKEKELNDYLKR 234 Query: 145 GEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 E D + K + + + + I ++ Y E+ Sbjct: 235 IEEAEKRDHRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKT 294 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRF 254 P V +G KF DDMF T ++ +++ + K LP+R Sbjct: 295 PQAVDKSLWEKSGHWEKFRDDMFTTASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRL 354 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 R+E A G++R F + + EE E + E+ K Sbjct: 355 AEFGSCHRNEPSGALH---GLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFG 411 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 ++ L T K E+W + Sbjct: 412 FDEIIIKLSTR----PKKKVGSEEIWDKSEEA 439 >gi|91070150|gb|ABE11072.1| threonyl-tRNA synthetase [uncultured Prochlorococcus marinus clone HF10-11A3] Length = 638 Score = 60.9 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 100/337 (29%), Gaps = 30/337 (8%) Query: 28 EYILSLDEKNRILIK---KIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETST--LK 81 E ++ ++ + LIK +E ++ S + + E + + + E L Sbjct: 115 EDLIKIENRINKLIKTNYDVEILQ-----VSKEEAIKTFKERDETFKLRIIEEIPEQGLI 169 Query: 82 EQLPILEKEEHEVCSS--LKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 E + + + + L ++ L R G + + Sbjct: 170 NLYKHEEYIDMCRGPHVPNTRHLRHFKLLKLSGSYWRGNSENESLQRIYGTAWAKEKELK 229 Query: 140 EHFEIGEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 ++ E D + K + + + + I ++ Y Sbjct: 230 DYLTRIEEAEKRDHRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIRGILKKNDY 289 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKS 249 E+ P V +G KF DDMF T ++ +++ + K Sbjct: 290 LEIKTPQAVDKSLWEKSGHWEKFRDDMFTTASENRTYAIKPMNCPCHIQVFNQGLKSYKD 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R R+E A G++R F + + EE E + E+ Sbjct: 350 LPIRLAEFGSCHRNEPSGALH---GLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEV 406 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 K ++ L T + E+W + Sbjct: 407 YKTFGFDEIIIKLSTR----PQKRVGSEEIWDKSEEA 439 >gi|309378779|emb|CBX22605.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 637 Score = 60.9 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARVFNELLVRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D EVW + RE Sbjct: 424 GKRAGSD-EVWDKAEQGLRE 442 >gi|298369384|ref|ZP_06980702.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] gi|298283387|gb|EFI24874.1| threonine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] Length = 648 Score = 60.9 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPRGWALWQTIEQHMRKELDAAGYREVKTPQIMDKAFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTQSEKREYAVKPMNCPGHVQIFNNSLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ E R I K+ H Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVDEARRFNELLVRIYKQFGFH 424 >gi|126740677|ref|ZP_01756363.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6] gi|126718192|gb|EBA14908.1| threonyl-tRNA synthetase [Roseobacter sp. SK209-2-6] Length = 649 Score = 60.9 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 96/326 (29%), Gaps = 24/326 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + ++++K + +I K +++R I V+ +++ Sbjct: 110 DRAEPFTPEDLGAIEKKMKEIINKRDEVRTEVWDRPRAILHYSDNNEPYKVELIESIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTG 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + +H+ E + + + A V Q + Sbjct: 230 KEKLKAHLHMLEEAAKRDHRKLGREMNLYHMQEEAPGQVFWHPNGWKIYTTLQDYMRRMQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ ++MF R + + + Sbjct: 290 ERDGYVEVNTPQVVDRKLWEASGHWDKYQENMFIVEVDEDHAREKAINALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + LPLR R E A G++R F + + E+ +E Sbjct: 350 VFNQGLKSYRDLPLRMAEFGSCARYEPSGALH---GIMRVRGFTQDDGHIFCSEDQIESE 406 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCT 324 + ++ ++ L H + L T Sbjct: 407 TAKFIAFLSKVYADLGFHNWTIKLST 432 >gi|213648823|ref|ZP_03378876.1| seryl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 28 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 16/27 (59%), Positives = 19/27 (70%) Query: 397 LENYLNADGSVTIPTVLRPYMNNLAVI 423 +ENY ADG + +P VLRPYMN L I Sbjct: 1 MENYQQADGRIEVPEVLRPYMNGLEYI 27 >gi|323487567|ref|ZP_08092859.1| hypothetical protein HMPREF9474_04610 [Clostridium symbiosum WAL-14163] gi|323399124|gb|EGA91530.1| hypothetical protein HMPREF9474_04610 [Clostridium symbiosum WAL-14163] Length = 653 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 118/346 (34%), Gaps = 29/346 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETSTLKEQLPI 86 E + +L+++ + +IK+ + + + + + + + + E + L E E++ Sbjct: 113 EDLDNLEKEMKKIIKEGQKL--EKFTLTREAAIRLMEERDEPYKVELIQELPE-NEEISF 169 Query: 87 LEKEEHEVCSSLKKLISC------IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 + + + +++ L R G ++ Sbjct: 170 YRQGGDFTDLCAGPHLMSTKPIKAFKLISSSMAYWRGDSSKAQLQRIYGTAFASKEELNA 229 Query: 141 HFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + E E + D ++ + + G +L + + + L +++ DL +E G Sbjct: 230 YLEHLEDIKKRDHNKLGREMRLFTTVDVIGQGLPLLMPNGVKIVQRLQRWVEDLEDNEWG 289 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTNL-YSHEII 245 Y PL+ + + +G + D MF T + + Y ++ Sbjct: 290 YIRTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEETDKEVFALRPMTCPFQYYVYKNDQH 349 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LPLR++ + FR+E + G+ R QF E I R + E L Sbjct: 350 SYRELPLRYSETSTLFRNEDSG---EMHGLTRVRQFTISEGHLIIRPDQVEEELAGCLDL 406 Query: 306 AEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 A L L L V + D D E W Q R++ Sbjct: 407 AVHCLTTLGLQDDVTYRLSKWDPDNREKYLGDEEYWEKTQGKIRDL 452 >gi|294141074|ref|YP_003557052.1| threonyl-tRNA synthetase [Shewanella violacea DSS12] gi|293327543|dbj|BAJ02274.1| threonyl-tRNA synthetase [Shewanella violacea DSS12] Length = 642 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 103/337 (30%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSA---QIGQAIAEGNLSLVD-ALKNETSTLKEQLPIL 87 +D ++++ + I+ ++ R + ++ + + ++ + ET + + Sbjct: 105 DIDLEHKLTQEDIDALQKRMTQLAKTNYKVEKKVGSWQVARDTFEARGETYKMAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 +++ ++ + + + + + + + S + + + A Sbjct: 165 SQDDQPALYHHEEYVDMCGGPHVPNMRFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALKVHLNRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWRLFLELETFIRQK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 ++ Y EV PL++ +G K+++ MF T + P + +++ Sbjct: 285 LGQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTKSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + E+ E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEDQVQQEVSACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + + VV L T + D E+W Sbjct: 402 QMVYDTYETFGFKNIVVKLSTR----PEQRIGDDEMW 434 >gi|20808138|ref|NP_623309.1| threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|22654110|sp|Q8R9A4|SYT_THETN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|20516726|gb|AAM24913.1| Threonyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] Length = 644 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 91/327 (27%), Gaps = 34/327 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEK 89 D + + E I N + + + +K + K +L Sbjct: 114 DFDTERPFTTEDFEAIEEEMNKIIKEDYKLERFVLSKEEAIKFMKEKDEPYKVELIEEIP 173 Query: 90 EEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSA 134 E E+ + + P +L R G Sbjct: 174 EGEEISFYKQGEFVDLCAGPHLPSTGMVKAIKLLSVAGAYWKGDEKNKMLQRIYGISFPK 233 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 + E+ + E D + K F + L F H Sbjct: 234 KSMLDEYLHMMEEAKKRDHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEH 293 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 + GY E+ P+++ +E +G + ++M+ T + P + +Y Sbjct: 294 I-KRGYQEIRTPIILNEELWKRSGHWDHYKENMYFTEIDGQTYAIKPMNCPGAMLVYKST 352 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR L R E G++R F + + E E ++ Sbjct: 353 LRSYRDLPLRLCELGLVHRHELSGVLH---GLMRVRSFTQDDAHLFMTPEQVEDEILGVI 409 Query: 304 SCAEEILK--RLDLHYRVVSLCTGDLG 328 + + K + H + + +G Sbjct: 410 NLVDYFYKIFGFEYHVELSTRPENSMG 436 >gi|294670480|ref|ZP_06735360.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307759|gb|EFE49002.1| hypothetical protein NEIELOOT_02198 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 637 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 63/200 (31%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLSLR---- 422 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + +VW + RE Sbjct: 423 PEKRAGSNDVWDKAEQGLRE 442 >gi|126695961|ref|YP_001090847.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] gi|166225476|sp|A3PBX1|SYT_PROM0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126543004|gb|ABO17246.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] Length = 638 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 91/306 (29%), Gaps = 26/306 (8%) Query: 28 EYILSLDEKNRILIK---KIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETST--LK 81 E ++ ++ + LIK +E ++ S + + E + + + E L Sbjct: 115 EDLIKIENRINKLIKTNYDVEILQ-----VSKEEAIKTFKERDETFKLRIIEEIPEEGLI 169 Query: 82 EQLPILEKEEHEVCSS--LKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 E + + + + L ++ L R G + + Sbjct: 170 NLYKHEEYIDMCRGPHVPNTRHLRHFKLLKLSGSYWRGNSENESLQRIYGTAWAKEKELK 229 Query: 140 EHFEIGEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 ++ E D + K + + + + I ++ Y Sbjct: 230 DYLTRIEEAEKRDHRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDY 289 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKS 249 E+ P V +G KF DDMF T ++ +++ + K Sbjct: 290 LEIKTPQAVDKSLWEKSGHWEKFRDDMFTTASENRTYAIKPMNCPCHIQVFNQGLKSYKD 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R R+E A G++R F + + EE E + E+ Sbjct: 350 LPIRLAEFGSCHRNEPSGALH---GLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEV 406 Query: 310 LKRLDL 315 K Sbjct: 407 YKTFGF 412 >gi|330883812|gb|EGH17961.1| seryl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 114 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 53 SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + S IGQA G + L + + +L + E + + L L+ IPN+P E Sbjct: 4 ARSKSIGQAKQRG--EDIAPLMADVERMGNELSEGKVELDGIQAELDALVLSIPNLPHES 61 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 VP+G N+ +R G + ++H +GE G +DFD A KLSGARF Sbjct: 62 VPVGADEEGNVEVRRWGTPTAFDFEVKDHVALGEKFGWLDFDTAAKLSGARF 113 >gi|241764278|ref|ZP_04762308.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN] gi|241366347|gb|EER60877.1| threonyl-tRNA synthetase [Acidovorax delafieldii 2AN] Length = 639 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 10/201 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 A V + + ++GY EV P L+ TG K+ D+M Sbjct: 257 DHAPGVVFWHPKGWAVWQQVEQYMRRVYRDNGYLEVKGPQLLDKTLWEKTGHWDKYRDNM 316 Query: 220 FCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 F T L P + ++ I + LPLR+ R+E G++ Sbjct: 317 FTTESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLH---GIM 373 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R F + + E+ E + +++ K + + T + Sbjct: 374 RVRGFTQDDGHIFCTEDHILPECTAYTALLQKVYKDFGFSNIIYKVATR----PEARIGS 429 Query: 337 LEVWLAGQNLYREISSCSTCG 357 E W ++ E S C Sbjct: 430 DESWDKAEHALMESLRASGCE 450 >gi|260425980|ref|ZP_05779959.1| threonyl-tRNA synthetase [Citreicella sp. SE45] gi|260420472|gb|EEX13723.1| threonyl-tRNA synthetase [Citreicella sp. SE45] Length = 649 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 95/328 (28%), Gaps = 28/328 (8%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARR--NSNSAQIGQAIAEGNLSLVDALKNET 77 R E + +++ K + +I + +R + + + EG + E Sbjct: 110 DRAEPFTPEDLGAIEAKMKEIINARDAVRTEIWDRARARAFYEERGEGYKVELVDRIPEG 169 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPN------------VPLEEVPIGTSANENILI 125 + + ++ + + + +P + + + Sbjct: 170 ADI--RMYWHGEWQDLCRGPHLQSTGQLPADAFKLMGVSGAYWFGDVNRPMLQRIQGVAF 227 Query: 126 RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL 185 R+ ++ E + + D A + Q + Sbjct: 228 RNRDDLKKYLNFLEEAAKRDHRKLGREMDLFHLQPEAPGQIFWHPNGWTVYTSLQDYMRR 287 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTN--- 238 + GY EV+ P +V + +G + ++MF R + + Sbjct: 288 MQRKDGYVEVNTPQVVNRKLWEESGHWENYRENMFIVEVDEEGAREKTINALKPMNCPCH 347 Query: 239 --LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +++H + + LPLR R E A G++R F + + + Sbjct: 348 VQIFNHGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDAHIFCTFDQIE 404 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCT 324 E ++ + +I L V L T Sbjct: 405 EESKKFIDFLAKIYADLGFDSWRVKLST 432 >gi|91787975|ref|YP_548927.1| threonyl-tRNA synthetase [Polaromonas sp. JS666] gi|123059945|sp|Q12BR3|SYT_POLSJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91697200|gb|ABE44029.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas sp. JS666] Length = 635 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 61/201 (30%), Gaps = 10/201 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 A V + + ++GY EV P ++ TG K+ D+M Sbjct: 257 DHAPGLVFWHPKGWTIWQGVEQYMRKVYQDNGYQEVKGPQVIDKTLWEKTGHWDKYRDNM 316 Query: 220 FCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 F T + ++ ++ I + LPLR+ R+E G++ Sbjct: 317 FTTESEKREYALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPSGGLH---GIM 373 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R F + + EE E + +++ + + T + Sbjct: 374 RVRGFTQDDGHIFCTEEQILKECVDYTTLLQKVYTDFGFKNIIYKVATR----PDARIGS 429 Query: 337 LEVWLAGQNLYREISSCSTCG 357 E W + E S C Sbjct: 430 DESWDKAEQALIESLRASGCE 450 >gi|406486|gb|AAD12502.1| unknown [Mycoplasma genitalium] Length = 107 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG 65 +R N + L +R++ Q + D+ R ++++E +++ + Q+ + Sbjct: 2 LRNNYDFFKKKLLERNVNEQLLNQFIQTDKLMRKNLQQLELANQKQSLLAKQVAKQKDNK 61 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 L E+ LK+++ L + + + L+ PN+ E VP+G Sbjct: 62 K------LLAESKELKQKIENLNNAYKDSQNISQDLLLNFPNIAHESVPVGK 107 >gi|254468875|ref|ZP_05082281.1| threonyl-tRNA synthetase [beta proteobacterium KB13] gi|207087685|gb|EDZ64968.1| threonyl-tRNA synthetase [beta proteobacterium KB13] Length = 652 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 60/202 (29%), Gaps = 10/202 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D A V + + ++GY E+ P ++ +G Sbjct: 265 KHLDLFHIQDNAPGMVFWHAKGWSLWQEIENYMRKKFVDYGYQEIKTPTVLDKTLWEKSG 324 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T ++ +++H + + LPLR R+E Sbjct: 325 HWENYHENMFITHSEHRDYAVKPMNCPGHVQIFNHSLHSYRELPLRLAEFGSCHRNEPSG 384 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + E+ E E K + V L T Sbjct: 385 ALH---GLMRVRGFTQDDAHIFCTEDQILDEVINFNKMLMETYKDFGFNDIEVKLSTR-- 439 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 + EVW + E Sbjct: 440 --PEKRVGSDEVWDQSEKALEE 459 >gi|319763197|ref|YP_004127134.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|330825391|ref|YP_004388694.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601] gi|317117758|gb|ADV00247.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|329310763|gb|AEB85178.1| threonyl-tRNA synthetase [Alicycliphilus denitrificans K601] Length = 639 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 65/202 (32%), Gaps = 11/202 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV AP ++ TG K+ ++MF Sbjct: 258 HSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKAPQILDKSLWEKTGHWDKYRENMF 317 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T L P + ++ I + LPLR+ R+E G++R Sbjct: 318 VTESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E+ E + + + V + T + Sbjct: 375 VRGFTQDDGHIFCTEDQIQHEVLAFTRLLQRVYQDFGFTDIVYKVATR----PDARIGSD 430 Query: 338 EVWLAGQNLYREISSCSTCGNF 359 E+W + E S C +F Sbjct: 431 EIWDKAEAALIESLKASGC-DF 451 >gi|289422357|ref|ZP_06424203.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L] gi|289157192|gb|EFD05811.1| threonine--tRNA ligase [Peptostreptococcus anaerobius 653-L] Length = 641 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 94/319 (29%), Gaps = 36/319 (11%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 +D R++ + +E I A + EG + + E + E+ Sbjct: 105 DIDLDYRLVPEDLEKIEAEMKKIVKE--DLKIEGFEVSREEAIKMMKEIGEDYKVEMIED 162 Query: 92 HEVC----SSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 + + P + A + I + + + Sbjct: 163 LPAEEVISMYRQGDFVDLCRGPHLQSTKKVKAFKLQSIAGAYWRGDENNKMLQRVYGTSF 222 Query: 148 LGLMDFDRATKLSG-----------------------ARFSVLTGHLAHLERALGQFMID 184 D + K+ F + L+++L ++ + Sbjct: 223 EKNKDLEAYLKMLEEAKKRDHRKIGKELGLFMIPEEGPGFPLFLPRGTALKQSLMKYWEE 282 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYS 241 +H H Y E+ P+++ + +G + ++M+ + + P + Y Sbjct: 283 IHREAH-YVEIETPIILNRKLWETSGHWFHYKENMYTVQIDEEDYAIKPMNCPGAMLYYK 341 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 ++ + P+R R E A G++R F + + E E + Sbjct: 342 SQLHSYRDFPMRVGERGRVHRHELSGALH---GLMRVRAFTQDDAHIFMLPEQIRDEIKG 398 Query: 302 MLSCAEEILKRLDLHYRVV 320 +++ +++ + Y V Sbjct: 399 VVNLIDKVYTKFGFSYHVE 417 >gi|83594816|ref|YP_428568.1| threonyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] gi|123753041|sp|Q2RNL4|SYT_RHORT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|83577730|gb|ABC24281.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] Length = 643 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 47/274 (17%) Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG 225 V Q + GY EV+ P+LV +G KF +MF + Sbjct: 264 VFWHPKGWTVYRTLQNYMRRRLDLAGYVEVNTPMLVDRALWEKSGHWEKFRQNMFISEAE 323 Query: 226 RWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 L+ ++ ++ I + LPLR R+EA A G++R F Sbjct: 324 DKLLAMKPMNCPCHIQIFKQGIKSYRDLPLRMAEFGACHRNEASGALH---GLMRVRAFV 380 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 + + E+ +E + + + + L V + E W Sbjct: 381 QDDAHIFCTEDQIVSETQAFCDLLKSVYRDLGFTEIKVKFSDR----PEVRAGSDETWDK 436 Query: 343 GQNLYREISSCSTCG-------------------------NFQS----------RRMNSR 367 + RE + + ++Q R+ + Sbjct: 437 AEAALREATDAAGLEWTLNPGEGAFYGPKLEFVLRDAIGRDWQCGTLQVDFVLPERLGAD 496 Query: 368 YRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENY 400 Y + + L+ + + R + ++EN Sbjct: 497 YVGEDGDKHRPV-MLHRAILGTFERFMGILIENC 529 >gi|291614198|ref|YP_003524355.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] gi|291584310|gb|ADE11968.1| threonyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] Length = 637 Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 10/199 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P ++ +G Sbjct: 250 LDLFHMQDEAPGMVFWHPKGWAMWQVIEQYMRAVYRDNGYHEIRCPQIIDRVLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + +MF T + ++ +++ ++ + LPLR+ R+E Sbjct: 310 EHYKANMFTTESEKHDYAIKPMNCPGHVQVFNADLRSYRELPLRYGEFGSCHRNEPSGGL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE +E + + ++ K H VV L L Sbjct: 370 H---GLMRVRGFVQDDGHIFCTEEQIESEVKAFNTLVLKVYKDFGFHDVVVKLA---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYR 348 D E+W +N R Sbjct: 424 EGRVGSD-EIWDKSENALR 441 >gi|190571398|ref|YP_001975756.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018797|ref|ZP_03334605.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238055114|sp|B3CMJ4|SYT_WOLPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190357670|emb|CAQ55114.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995748|gb|EEB56388.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 633 Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 7/169 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D D A + + + + I +GY EV P+LV E +G Sbjct: 246 KDMDLFHIQEEAVGQIFWHEQGYTLYNVLESYIRKKLMNNGYFEVKTPILVSKELWEKSG 305 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSEAG 266 KF ++MF + + + I + LP+R R+E+ Sbjct: 306 HWDKFRENMFIIDESESKKLAIKPMNCPCHVQIFNSHIRSYRDLPIRMAEFGTCHRNESS 365 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + G++R F + + E+ +E + +E+ L Sbjct: 366 GSLH---GLMRVRGFTQDDAHIFCMEKQVNSETVKFCDLLKEVYSELGF 411 >gi|126462800|ref|YP_001043914.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|166225489|sp|A3PLC6|SYT_RHOS1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126104464|gb|ABN77142.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 646 Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 51/434 (11%), Positives = 123/434 (28%), Gaps = 57/434 (13%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++++ + +I E ++ + IG G V+ ++ Sbjct: 110 DREETFTPEDLGAIEKRMKEIINAREAVKTELWERARAIGYYEERGEPFKVELVQAIPED 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + + + ++ Sbjct: 170 QSIRMYWHGGWQDLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKT 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 + + +H+ E + + + A V + + Sbjct: 230 RDELKAYLHMLEEAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRL 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 + GY E+ P +V + +G + ++MF + + + + Sbjct: 290 RQAGYKEIRTPQVVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + LPLR R E+ G++R F + + E+ +E Sbjct: 350 VYNQGLKSYRDLPLRLAEFGSCHRYESSG---SMHGLMRVRGFVQDDAHIFCTEDQIESE 406 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCT----------------GDLGFSACKTYDLEVWLA 342 + + K L + L T L + K Sbjct: 407 CAAFIELLSSVYKDLGFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAAYEIDP 466 Query: 343 GQNLYR----------EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLNGSGV 387 G+ + I CG FQ R+ + Y + + + L+ + + Sbjct: 467 GEGAFYGPKLDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHR-PYMLHRAIL 525 Query: 388 AV-GRCLIAILENY 400 R + ++ENY Sbjct: 526 GSFERFIGILIENY 539 >gi|74317025|ref|YP_314765.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] gi|123731846|sp|Q3SK34|SYT_THIDA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|74056520|gb|AAZ96960.1| threonyl-tRNA synthetase, class IIa [Thiobacillus denitrificans ATCC 25259] Length = 637 Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+GY EV P ++ +G Sbjct: 252 LDLLHMQDEAPGMVFWHPKGWIVWQQIEQYMREKFVEYGYQEVRTPAVMDRSMWEKSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T + P + +++ + + LPLR R+E A Sbjct: 312 ENYRDNMFTTASENRDYAVKPMNCPGHVQIFNSGLHSYRDLPLRLAEFGSCHRNEPSGAL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + +++ Sbjct: 372 H---GIMRVRGFTQDDAHIFCMEEQVEQEVADFIVMLQKVYADFGF 414 >gi|121605747|ref|YP_983076.1| threonyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] gi|166225475|sp|A1VR77|SYT_POLNA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120594716|gb|ABM38155.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Polaromonas naphthalenivorans CJ2] Length = 635 Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 78/259 (30%), Gaps = 17/259 (6%) Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--REHFEIGEALGLMDFDRATKLSG 161 E+ + + + + + R+H ++G+ L L D Sbjct: 204 YWRGDHHNEMLQRIYGTAWATKDELQQYLTMLEEADKRDHRKLGKELDLFHID-----DH 258 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 + V + + +GY EV P L+ TG K+ D+MF Sbjct: 259 SPGLVFWHPKGWTVWQGVEQYMRKVYQNNGYQEVKGPQLLDKTLWEKTGHWDKYRDNMFT 318 Query: 222 TTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 T + ++ ++ I + LPLR+ R+E G++R Sbjct: 319 TESEKRDFALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLH---GIMRV 375 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 F + + EE E + +++ + + T + E Sbjct: 376 RGFTQDDGHIFCTEEQILKECVDYTTLLQKVYTDFGFKNIIYKVATR----PEARIGSDE 431 Query: 339 VWLAGQNLYREISSCSTCG 357 W ++ E S C Sbjct: 432 SWDKAEHALIESLRASGCE 450 >gi|167855812|ref|ZP_02478565.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755] gi|167853091|gb|EDS24352.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755] Length = 643 Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 38/321 (11%), Positives = 89/321 (27%), Gaps = 31/321 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + ++ + AR + + + ++ + E+ + + Sbjct: 105 DIDLDRSLTQEDLDALEARMLELAKTNYDVVKKRVSWQEARDTFESRGESYKMAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR-------- 139 K+ ++ I + + + + + S + + Sbjct: 165 SKDYRPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWA 224 Query: 140 ------EHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 ++ E D D A V + + + Sbjct: 225 DKKQLADYLHRLEEAAKRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 ++ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKQYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHIQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + E +E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCMPEQVESEVTSCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCT 324 +I V L T Sbjct: 402 KMVYDIYSTFGFENIQVKLST 422 >gi|313668802|ref|YP_004049086.1| threonyl-tRNA synthetase [Neisseria lactamica ST-640] gi|313006264|emb|CBN87726.1| putative threonyl-tRNA synthetase [Neisseria lactamica 020-06] Length = 637 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQAVEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D EVW + RE Sbjct: 424 EKRAGSD-EVWDKAEQGLRE 442 >gi|170287992|ref|YP_001738230.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2] gi|238688803|sp|B1L7W6|SYT_THESQ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|170175495|gb|ACB08547.1| threonyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 640 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 97/321 (30%), Gaps = 22/321 (6%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 ++ E + ++++ + +IK E++ R S + + + ++ L E Sbjct: 109 KNGRLTEEDLPKIEQEMKKIIK--ENLPIERKEISKEEARKLFNNQPYKLE-LIEEIEGD 165 Query: 81 KEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 + + + ++ + + S +L R G + Sbjct: 166 RVTIYRQGEFVDLCRGPHLPSTGIVKHFKLLSVSGAYWRGSEKNPMLTRVYGTAFAKKED 225 Query: 138 SREHFEIGEALGLMDFDR---------ATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 + + E D + + L +F +LH Sbjct: 226 LDNYLKFLEEAQRRDHRKLGPHLELFMLNTEYAPGMPFFLPKGVVVLNELMKFSRELH-R 284 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEII 245 E GY E+ PL++ ++ +G +A++M+ ++ +Y + Sbjct: 285 ERGYQEIFTPLIMNEQLWKISGHWDHYAENMYFIEKDEERYAVKPMNCPGHILVYKSRTV 344 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LPLRF R E G++R F + + E +L Sbjct: 345 SYRDLPLRFFEFGRVHRYERSGVLH---GLMRVRSFTQDDAHIFCTPGQIEEEILGVLDL 401 Query: 306 AEEILKRLDLHYRVVSLCTGD 326 I + YRV + Sbjct: 402 INTIYSQFGFTYRVELSTMPE 422 >gi|161869662|ref|YP_001598829.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442] gi|189083614|sp|A9M375|SYT_NEIM0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161595215|gb|ABX72875.1| threonyl-tRNA synthetase [Neisseria meningitidis 053442] Length = 637 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|322833539|ref|YP_004213566.1| threonyl-tRNA synthetase [Rahnella sp. Y9602] gi|321168740|gb|ADW74439.1| threonyl-tRNA synthetase [Rahnella sp. Y9602] Length = 642 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 89/318 (27%), Gaps = 29/318 (9%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRN--SNSAQIG-QAIAEGNLSLVDALKNETS 78 + +L +++ L++K A +N ++ Q + S + K + Sbjct: 101 GFYYDVDLDRTLTQEDIELLEKRMHELAEKNYDVIKKKVSWQEARDTFASRGEEYK--VA 158 Query: 79 TLKEQLPILEKEEHEVCSSLKKLIS-----CIPNVPLEEVPIGTSANENILIRSVGKKPS 133 L E + + + + ++ + A + + Sbjct: 159 ILDENISHDDHPGLYHHEEYVDMCRGPHVPNMRFCHHFKLQKTSGAYWRGNSDNKMLQRI 218 Query: 134 AIHLSRE------HFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQ 180 + + + E G D D A V + + Sbjct: 219 YGTAWADKKQLNAYIQRLEEAGKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELE 278 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLT 237 + + + Y EV P ++ TG + + MF T + P + Sbjct: 279 AFVRMKLKSYDYQEVKGPFMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHV 338 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +++ + + LPLR R+E A G++R F + + EE Sbjct: 339 QIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQVRD 395 Query: 298 EHERMLSCAEEILKRLDL 315 E + ++ Sbjct: 396 EVNSCIRMVYDMYSTFGF 413 >gi|316983701|gb|EFV62682.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 648 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLIRIYKQFGFHDVSVKLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|50121350|ref|YP_050517.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] gi|73919790|sp|Q6D4G8|SYT_ERWCT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|49611876|emb|CAG75325.1| threonyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] Length = 642 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + IE + R + + I + ++ A + ET + + Sbjct: 105 DVDIDRTLTQEDIELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ I + + + + S + + + A Sbjct: 165 SHDDRPGLYHHEEYIDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + + Sbjct: 225 DKKQLASYLQRLEEASKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 + Y EV P ++ TG + + MF T + P + +++ Sbjct: 285 LKSYQYQEVKGPFMMDRVMWEKTGHWDNYKEAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 KMVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|325197939|gb|ADY93395.1| threonyl-tRNA synthetase [Neisseria meningitidis G2136] Length = 637 Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|15676618|ref|NP_273762.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58] gi|22654143|sp|Q9K095|SYT_NEIMB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|7225946|gb|AAF41133.1| threonyl-tRNA synthetase [Neisseria meningitidis MC58] gi|325140125|gb|EGC62654.1| threonyl-tRNA synthetase [Neisseria meningitidis CU385] gi|325200596|gb|ADY96051.1| threonyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 637 Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLIRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|126735278|ref|ZP_01751024.1| threonyl-tRNA synthetase [Roseobacter sp. CCS2] gi|126715833|gb|EBA12698.1| threonyl-tRNA synthetase [Roseobacter sp. CCS2] Length = 648 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 97/317 (30%), Gaps = 24/317 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + ++++K + +I K +++R + I G V+ +++ Sbjct: 110 DRKEPFTPEDLSTIEKKMKEIINKRDEVRTEIWERNVAIQYYKDRGEPYKVELIESIPGE 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI-----GTSANENILIRSVGKKPSA 134 ++ + + +P + + I ++ +L R G + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQVPADGFKLMSIAGAYWRGDSDRAMLQRIYGTAFTN 229 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHT 187 + H + E D + + A V Q + Sbjct: 230 KEGLKAHLHMLEEAAKRDHRKLGREMNLFHMQEEAPGQVFWHPNGWTVYTELQDYVRRKQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 Y E++ P +V + +G K+ + MF + + + + Sbjct: 290 RAGDYREINTPQVVDRKLWEASGHWDKYHEHMFVVEVEEEHAKEKAINALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + LPLR R E A G++R F + + EE TE Sbjct: 350 VFNQGLKSYRDLPLRLAEFGSCARYEPSGALH---GIMRVRGFTQDDGHIFCTEEQIETE 406 Query: 299 HERMLSCAEEILKRLDL 315 R ++ +I K L Sbjct: 407 CARFINFLADIYKDLGF 423 >gi|261821451|ref|YP_003259557.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163] gi|261605464|gb|ACX87950.1| threonyl-tRNA synthetase [Pectobacterium wasabiae WPP163] Length = 642 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + IE + R + + I + ++ A + ET + + Sbjct: 105 DVDIDRTLTQEDIELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 SHDDRPGLYHHEEYVDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + + Sbjct: 225 DKKQLASYLQRLEEASKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 + Y EV P ++ TG + + MF T + P + +++ Sbjct: 285 LKSYQYQEVKGPFMMDRVMWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 KMVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|240115143|ref|ZP_04729205.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|291044371|ref|ZP_06570080.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|291011265|gb|EFE03261.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] Length = 648 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|325127774|gb|EGC50682.1| threonyl-tRNA synthetase [Neisseria meningitidis N1568] Length = 637 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|260441039|ref|ZP_05794855.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|268600819|ref|ZP_06134986.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268584950|gb|EEZ49626.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID18] Length = 637 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|325133766|gb|EGC56422.1| threonyl-tRNA synthetase [Neisseria meningitidis M13399] gi|325144077|gb|EGC66385.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240013] gi|325206438|gb|ADZ01891.1| threonyl-tRNA synthetase [Neisseria meningitidis M04-240196] Length = 637 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|308388909|gb|ADO31229.1| putative threonyl-tRNA synthetase [Neisseria meningitidis alpha710] gi|325202484|gb|ADY97938.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240149] gi|325207764|gb|ADZ03216.1| threonyl-tRNA synthetase [Neisseria meningitidis NZ-05/33] Length = 637 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|219871154|ref|YP_002475529.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165] gi|254783524|sp|B8F5H9|SYT_HAEPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219691358|gb|ACL32581.1| threonyl-tRNA synthetase [Haemophilus parasuis SH0165] Length = 643 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 38/321 (11%), Positives = 90/321 (28%), Gaps = 31/321 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + ++ + AR + + + ++ + E+ + + Sbjct: 105 DIDLDRSLTQEDLDALEARMLELAKTNYDVVKKRVSWQEARDTFESRGESYKMAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR-------- 139 K++ ++ I + + + + + S + + Sbjct: 165 SKDDRPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWA 224 Query: 140 ------EHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 ++ E D D A V + + + Sbjct: 225 DKKQLADYLHRLEEAAKRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 ++ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKQYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHIQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + E +E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCMPEQVESEVTSCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCT 324 +I V L T Sbjct: 402 KMVYDIYSTFGFENIQVKLST 422 >gi|332529095|ref|ZP_08405059.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] gi|332041318|gb|EGI77680.1| threonyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] Length = 644 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 67/203 (33%), Gaps = 11/203 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + E+GY EV P ++ TG K+ ++MF Sbjct: 258 HSPGTVFWHPKGWTVWQEVEQYMRRVYRENGYREVKGPQILDKSLWEKTGHWDKYRENMF 317 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T L P + +Y + + LPLR+ R+E G++R Sbjct: 318 TTESEKRDYALKPMNCPGHILIYKQGVKSYRDLPLRYGEFGACHRNEPTGGLH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E+ E + S +++ K + L T + Sbjct: 375 VRAFTQDDGHIFCTEDQIQAEVKAFTSLLQKVYKDFGFTEIIYKLSTR----PEKRIGSE 430 Query: 338 EVWLAGQNLYREISSCSTCG-NF 359 E W +N E S C ++ Sbjct: 431 ESWDRAENALAEGLRASGCEFDY 453 >gi|261392911|emb|CAX50492.1| threonyl-tRNA synthetase (threonine--tRNA ligase; ThrRS) [Neisseria meningitidis 8013] gi|325203807|gb|ADY99260.1| threonyl-tRNA synthetase [Neisseria meningitidis M01-240355] Length = 637 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EQRAGSD-DVWDKAEQGLRE 442 >gi|240117427|ref|ZP_04731489.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1] Length = 648 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|325136057|gb|EGC58667.1| threonyl-tRNA synthetase [Neisseria meningitidis M0579] Length = 643 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 256 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 315 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 316 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 375 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 376 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 429 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 430 EKRAGSD-DVWDKAEQGLRE 448 >gi|268603124|ref|ZP_06137291.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268587255|gb|EEZ51931.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID1] Length = 637 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|240122983|ref|ZP_04735939.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332] Length = 648 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|240080190|ref|ZP_04724733.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19] Length = 648 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|304387978|ref|ZP_07370150.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091] gi|304337977|gb|EFM04115.1| threonine--tRNA ligase [Neisseria meningitidis ATCC 13091] Length = 643 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 256 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 315 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 316 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 375 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 376 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 429 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 430 EQRAGSD-DVWDKAEQGLRE 448 >gi|297250596|ref|ZP_06864620.2| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768] gi|296838509|gb|EFH22447.1| threonine--tRNA ligase [Neisseria polysaccharea ATCC 43768] Length = 648 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|268681605|ref|ZP_06148467.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|268621889|gb|EEZ54289.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae PID332] Length = 637 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|240016048|ref|ZP_04722588.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA6140] Length = 648 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|320529200|ref|ZP_08030292.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399] gi|320138830|gb|EFW30720.1| threonyl-tRNA synthetase [Selenomonas artemidis F0399] Length = 639 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 102/325 (31%), Gaps = 26/325 (8%) Query: 23 LEPQSEYILSLDEKNRILIKK-----IEDIRARRNSN--SAQIGQAIAEG---NLSLVDA 72 + + L+ D R + K+ E+++ R S I +G + L++ Sbjct: 106 YDFDMDRQLT-DADLRDIEKEMKKIVKENLKLERREIPRSEAIAYFREKGENYKVELIED 164 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 L + + + + + S +L R G Sbjct: 165 LPEDVTISTYTQGEFTDLCAGPHVLSTGKVKALRLQSIAGAYWRGSEKNKMLQRIYGTAF 224 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMID 184 + + E D + + F + L L + + Sbjct: 225 EKQEELDAYLHMLEEAEKRDHRKLGRELDLFSLHEEGPGFPFFHPNGMILRNELLNYWRE 284 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYS 241 +H +GY+E+S P+++ + +G + ++M+ T + + P + +Y Sbjct: 285 VH-RRYGYSEISTPVILSRKLWETSGHWFHYRENMYTTQIDEEDYAIKPMNCPGCMLVYR 343 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 ++ + LPLR L R E A G+ R F + + E E + Sbjct: 344 SQLHSYRDLPLRLAELGLVHRHELSGALH---GLFRVRNFTQDDAHLFVTPEQIEGEIQH 400 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGD 326 + +E+ + L Y+ D Sbjct: 401 TIDLFDEVYRTFGLSYKAELSTRPD 425 >gi|194098020|ref|YP_002001068.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|193933310|gb|ACF29134.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] Length = 648 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|88657649|ref|YP_506841.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] gi|123750088|sp|Q2GI92|SYT_EHRCR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|88599106|gb|ABD44575.1| threonyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 633 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 59/168 (35%), Gaps = 6/168 (3%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + + + A + + + I +GY EV P+L+ E +G Sbjct: 248 RELELFHIQNEACGQIFWHTKGWTIYRIIENYIRKKLENNGYIEVKTPILLNKELWEKSG 307 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 KF ++MF + + ++ +++ +I + LP+R R EA Sbjct: 308 HWDKFRENMFLSEAEDKTLAIKPMNCPCHIQIFNSKIRSYRDLPIRMAEFGTCHRYEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E +E + + EI K Sbjct: 368 ALH---GLMRVRGFTQDDAHIFCTESQITSEALKFCNLLIEIYKDFGF 412 >gi|59800743|ref|YP_207455.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] gi|73919809|sp|Q5F9U4|SYT_NEIG1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|59717638|gb|AAW89043.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] Length = 637 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|218767842|ref|YP_002342354.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491] gi|22654142|sp|Q9JVA3|SYT_NEIMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|121051850|emb|CAM08156.1| putative threonyl-tRNA synthetase [Neisseria meningitidis Z2491] Length = 637 Score = 59.8 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EQRAGSD-DVWDKAEQGLRE 442 >gi|319410089|emb|CBY90425.1| threonyl-tRNA synthetase (threonine-tRNA ligase; ThrRS) [Neisseria meningitidis WUE 2594] Length = 637 Score = 59.8 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EQRAGSD-DVWDKAEQGLRE 442 >gi|218709221|ref|YP_002416842.1| threonyl-tRNA synthetase [Vibrio splendidus LGP32] gi|218322240|emb|CAV18357.1| Threonyl-tRNA synthetase [Vibrio splendidus LGP32] Length = 655 Score = 59.8 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 99/337 (29%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D ++ + + +E I R + Q + + DA + T K ++ + Sbjct: 119 DIDLEHSLTQEDLEKIEKRMKELAKTKYQVVKKKVSWQEARDAFEARGETYKIEILDENV 178 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K++ ++ I + + + + + S + + + Sbjct: 179 SKDDRPGLYHHEEYIDMCRGPHVPHMGFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFH 238 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V H + I Sbjct: 239 DKKALKAHLVRLEEAAKRDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIRQK 298 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +E+ Y EV PL++ +G K+A+ MF T + P + +++ Sbjct: 299 LTEYDYQEVKGPLMMDRVLWERSGHWDKYAEAMFTTSSENREYAIKPMNCPGHVQIFNQG 358 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E+ E + + Sbjct: 359 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHVFCTEDQVQQEVKACI 415 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + VV L T + E+W Sbjct: 416 EMVYDTYTTFGFENIVVKLSTR----PEQRVGSDEMW 448 >gi|86147528|ref|ZP_01065839.1| threonyl-tRNA synthetase [Vibrio sp. MED222] gi|85834696|gb|EAQ52843.1| threonyl-tRNA synthetase [Vibrio sp. MED222] Length = 642 Score = 59.8 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 99/337 (29%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D ++ + + +E I R + Q + + DA + T K ++ + Sbjct: 106 DIDLEHSLTQEDLEKIEKRMKELAKTKYQVVKKKVSWQEARDAFEARGETYKIEILDENV 165 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K++ ++ I + + + + + S + + + Sbjct: 166 SKDDRPGLYHHEEYIDMCRGPHVPHMGFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFH 225 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V H + I Sbjct: 226 DKKAFKAHLVRLEEAAKRDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIRQK 285 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +E+ Y EV PL++ +G K+A+ MF T + P + +++ Sbjct: 286 LTEYDYQEVKGPLMMDRVLWERSGHWDKYAEAMFTTSSENREYAIKPMNCPGHVQIFNQG 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E+ E + + Sbjct: 346 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHVFCTEDQVQQEVKACI 402 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + VV L T + E+W Sbjct: 403 EMVYDTYTTFGFENIVVKLSTR----PEQRVGSDEMW 435 >gi|254674303|emb|CBA10087.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha275] Length = 637 Score = 59.8 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EQRAGSD-DVWDKAEQGLRE 442 >gi|240127689|ref|ZP_04740350.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 648 Score = 59.8 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|268596339|ref|ZP_06130506.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268550127|gb|EEZ45146.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae FA19] Length = 638 Score = 59.8 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 251 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 311 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 371 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 424 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 425 EKRAGSD-DVWDKAEQGLRE 443 >gi|240013609|ref|ZP_04720522.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae DGI18] gi|240112403|ref|ZP_04726893.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|240120679|ref|ZP_04733641.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1] Length = 648 Score = 59.8 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|268686074|ref|ZP_06152936.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|268626358|gb|EEZ58758.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 637 Score = 59.8 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|254493203|ref|ZP_05106374.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268598466|ref|ZP_06132633.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|226512243|gb|EEH61588.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268582597|gb|EEZ47273.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae MS11] Length = 637 Score = 59.8 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|330994118|ref|ZP_08318046.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] gi|329758585|gb|EGG75101.1| Threonyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] Length = 644 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 62/192 (32%), Gaps = 9/192 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A + ++ Q + +GY EV P LV +G Sbjct: 249 REMDLFHIQEEAVGQIFWHPKGWRLYSVLQDYMRRAQDRNGYQEVRTPQLVDRALWEASG 308 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEA 265 K+ + MF T + + ++ H + + LPLR R E Sbjct: 309 HWDKYREHMFIATVEDEDKTLALKPMNCPCHVQIFRHGLRSYRELPLRMAEFGACHRYEP 368 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL-HYRVVSLCT 324 A G++R F + + E+ E R + ++ + L H+RV Sbjct: 369 SGALH---GIMRVRGFTQDDAHIFCTEDQIADETARFVRMLADVYQDLGFEHFRVKFADR 425 Query: 325 GDLGFSACKTYD 336 + T+D Sbjct: 426 PEQRAGDDATWD 437 >gi|23016433|ref|ZP_00056189.1| COG0441: Threonyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 621 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 63/238 (26%), Gaps = 11/238 (4%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + +H+ E + + + + A SV Sbjct: 200 QRIYGTAWFDKKELDAYLHMLEEAEKRDHRRLGREMELFHQQEEAAGSVFWHKKGWTLYR 259 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 + + + Y EV P LV +G KF++ MF + Sbjct: 260 AVESYMRRRLEANDYQEVKTPQLVDFSLWEASGHADKFSESMFTIRTQDERHLAVKPMNC 319 Query: 238 NLYSHEII----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 + + LPLR R E A G++R F + + E+ Sbjct: 320 PCHVQIFRQGIKSYRDLPLRMAEFGSCHRYEPSGALH---GIMRVRAFTQDDAHIFCTED 376 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 +E +E+ V A + E W ++ E S Sbjct: 377 QITSETIAFCQLLKEVYTDFGFTDVRVKFSDR----PAKRAGSDETWDKAESALLEAS 430 >gi|89094703|ref|ZP_01167639.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92] gi|89081049|gb|EAR60285.1| threonyl-tRNA synthetase [Oceanospirillum sp. MED92] Length = 639 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 57/197 (28%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + Y EV P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHPKGWALYQGIEQYMRQKLRPRKYVEVKTPQVVERTLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF+++MF T ++ +Y+ I + LPLR R+E A Sbjct: 310 EKFSEEMFTTHSENRDFAVKPMNCPCHVQVYNQGIRSYRDLPLRMAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + E+ L T Sbjct: 370 H---GIMRVRGFVQDDGHIFCAEDSIQSEVSEFIDFLHEVYADFGFQEIQYKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 + EVW + Sbjct: 423 PEKRVGSDEVWDKSEKA 439 >gi|307131177|ref|YP_003883193.1| threonyl-tRNA synthetase [Dickeya dadantii 3937] gi|306528706|gb|ADM98636.1| threonyl-tRNA synthetase [Dickeya dadantii 3937] Length = 642 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 34/315 (10%), Positives = 82/315 (26%), Gaps = 37/315 (11%) Query: 32 SLDEKNRILIKKIEDIRARRNSN-SAQIGQAIAEGNLSLVDALKN------ETSTLKEQL 84 +D + + ++ + R + S + + + + L E + Sbjct: 105 DVDLDRTLTQEDLDLLEKRMHELASKDYDVIKKKVSWQEARDTFAARGESYKVAILDENI 164 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 ++ ++ I + + + + S + + + Sbjct: 165 SHDDRPG---LYHHEEYIDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGT 221 Query: 145 GEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 A D A V + + + Sbjct: 222 AWADKKQLSAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFV 281 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLY 240 + E+ Y EV P ++ TG + + MF T + P + ++ Sbjct: 282 RMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIF 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + + + LPLR R+E + G++R F + + EE E Sbjct: 342 NQGLKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQVRDEVN 398 Query: 301 RMLSCAEEILKRLDL 315 + ++ Sbjct: 399 SCIKMVYDMYSTFGF 413 >gi|329118120|ref|ZP_08246832.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] gi|327465780|gb|EGF12053.1| threonine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] Length = 640 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + GY EV P ++ +G Sbjct: 256 LDLFHLQEEAPGMVFWHPRGWALWQAIEQHMRKELDAAGYREVKTPQIMDKTFWERSGHW 315 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T + ++ ++++ + + LP+R R+E A Sbjct: 316 DNYKDNMFVTQSEKREYAVKPMNCPGHVQIFNNSLRSYRDLPMRLAEFGSCHRNEPSGAL 375 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ E R I K+ H Sbjct: 376 H---GLMRVRGFVQDDAHIFCTEDQIVEEARRFNELLVRIYKQFGFH 419 >gi|91776355|ref|YP_546111.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus flagellatus KT] gi|123254150|sp|Q1GZR7|SYT_METFK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91710342|gb|ABE50270.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylobacillus flagellatus KT] Length = 635 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 6/162 (3%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + E GY EV P ++ +G + Sbjct: 254 HMQDEAPGMVFWHPRGWVIWQEVEQYMRNMFREFGYQEVRTPTIMDRVMWEKSGHWQNYH 313 Query: 217 DDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 D+MF T + P + +++ + + LPLR R+E A Sbjct: 314 DNMFTTASENRDYAVKPMNCPGHIQIFNSTLHSYRDLPLRLAEFGSCHRNEPSGALH--- 370 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + + K Sbjct: 371 GLMRVRGFTQDDAHIFCTEDQVKDEVADFIVMLYKAYKDFGF 412 >gi|222528807|ref|YP_002572689.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222455654|gb|ACM59916.1| threonyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 647 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 52/390 (13%), Positives = 121/390 (31%), Gaps = 59/390 (15%) Query: 23 LEPQSEY------ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 + E + ++E+ + +IK ED++ R S + + ++ Sbjct: 107 YDFDIEESITREILEKIEEEMQKIIK--EDLKIERFELSRE----------EAIKLMQQR 154 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANE 121 K +L E + + + P ++ Sbjct: 155 GENYKVELINDIPEGEIISFYRQGEFVDLCTGPHLPSTGRVKAFKLLSVAGAYWRGNSKN 214 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-- 176 +L R G E+ + E D +R + + V G + + Sbjct: 215 KMLQRIYGISFEKKSELDEYLKKLEEAKKRDHNRIGRELEIFTTSEVVGQGLPLLMPKGA 274 Query: 177 ---ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSE 233 + Q ++ + GY P + + + +G + D MF + + Sbjct: 275 KILQILQRFVEDEEEKRGYLLTKTPYMAKSDLYKISGHWDHYRDGMFVIEEDENEVLALR 334 Query: 234 VSLTN----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 +Y+ + + LP+R++ + FR+E+ + G++R QF + I Sbjct: 335 PMTCPFQFLIYNSKQRSYRDLPIRYSETSTLFRNESSG---EMHGLIRVRQFTLSDAHII 391 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHY-RVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 R + E + +L + I+K L + D + E W +N + Sbjct: 392 CRPDQVEEEFKGVLDLIQYIMKILGIENDIWYRFSRWDPNNKEKYIDNPEAWEKTENDMK 451 Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 + ++ Y++ ++ + Sbjct: 452 ------NILD----KLGINYKEAKGEAAFY 471 >gi|239998484|ref|ZP_04718408.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|240125235|ref|ZP_04738121.1| putative threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|317163762|gb|ADV07303.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107] Length = 648 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|293399557|ref|ZP_06643710.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62] gi|291610126|gb|EFF39248.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae F62] Length = 648 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 435 EKRAGSD-DVWDKAEQGLRE 453 >gi|268683833|ref|ZP_06150695.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|268624117|gb|EEZ56517.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] Length = 637 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 424 EKRAGSD-DVWDKAEQGLRE 442 >gi|227327045|ref|ZP_03831069.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 642 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + IE + R + + I + ++ A + ET + + Sbjct: 105 DVDIDRTLTQEDIELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 +++ ++ I + + + + S + + + A Sbjct: 165 SRDDRPGLYHHEEYIDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + + Sbjct: 225 DKKQLAAYLQRLEEASKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 + Y EV P ++ TG + + MF T + P + +++ Sbjct: 285 LKSYQYQEVKGPFMMDRVMWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 KMVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|188588550|ref|YP_001919768.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|238689641|sp|B2UYW3|SYT_CLOBA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188498831|gb|ACD51967.1| threonyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 643 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 101/339 (29%), Gaps = 33/339 (9%) Query: 42 KKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + +E + A + ++ +K+E ++ + E E + Sbjct: 115 QDLEKLEAEMKKIIKENPSIEKFELPRDEALELMKDEPYKVELINDLGEDEIISFYKIGE 174 Query: 100 KLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI-------------HLSREHFEIGE 146 C + PI E+ E E Sbjct: 175 FTDLCAGPHVMSLKPIKALKLTRSAGAYWKGDEKNKMLTRIYGTAFLKKSELDEYLEAIE 234 Query: 147 ALGLMD---FDRATKLSGARFSVLTGHLAHLER-----ALGQFMIDLHTSEHGYTEVSAP 198 D R KL +V G + + Q ++ GY P Sbjct: 235 EAKKRDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQTLQRWVEDEEERRGYVLTKTP 294 Query: 199 LLVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTN-LYSHEIIESKSLPL 252 L+ + + +G + D MF + + + +Y+ E + LP+ Sbjct: 295 LMAKSDLYKISGHWDHYKDGMFVLGDEEKDEEVFALRPMTCPFQYTIYNAEQHSYRDLPI 354 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 R+ + FR+E+ + G++R QF + I E E + +L + ++K Sbjct: 355 RYGETSTLFRNESSG---EMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVLELIQYLMKT 411 Query: 313 LDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 L + + + D + D E W Q+ R I Sbjct: 412 LGIDEDISYRFSKWDPNNTEKYINDPEAWNKTQDTMRTI 450 >gi|325982725|ref|YP_004295127.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212] gi|325532244|gb|ADZ26965.1| threonyl-tRNA synthetase [Nitrosomonas sp. AL212] Length = 635 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 79/305 (25%), Gaps = 38/305 (12%) Query: 36 KNRILIKKIEDIRARRNSN--SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 + R++ D++ R + I +G + E +P E Sbjct: 121 EKRMIEISKRDLKIDRKILERAKAIDFFKKQGEFYKA--------QIIESIPGDEDLSLY 172 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI-------------HLSRE 140 C I + + + Sbjct: 173 SQGDFTD--LCRGPHVPATSKIKVFKLMKVAGAYWRGDSNNEMLQRIYGTAWASKDDQKN 230 Query: 141 HFEIGEALGLMDFDRATKL-------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 + E D + K A V + + S +GY Sbjct: 231 YLHRLEEAEKRDHRKIGKQLNLFHMQDEASGMVFWHPKGWTLWQQIEQYMRNILSHNGYH 290 Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSL 250 E+ P ++ + +G F ++MF T ++ +++ + + L Sbjct: 291 EIRTPQILDKDLWVRSGHWENFRENMFITHSDERDFAIKPMNCPGHVQIFNQGLRSYREL 350 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 P+RF R+EA A G++R F + + E+ E + + + Sbjct: 351 PIRFAEFGSCHRNEASGALH---GIMRVRAFTQDDAHIFCTEDQIQQEVVEFIDLLKIVY 407 Query: 311 KRLDL 315 Sbjct: 408 ADFGF 412 >gi|254527233|ref|ZP_05139285.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] gi|221538657|gb|EEE41110.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] Length = 638 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 97/332 (29%), Gaps = 20/332 (6%) Query: 28 EYILSLDEKNRILIK---KIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 E ++ ++ + LIK +E ++ + + L +++ + E + Sbjct: 115 EDLIKIENRINKLIKTNYDVEILQVSKKEAIKTFKERDETFKLRIIEDIPEEGLINLYKH 174 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 + + + L ++ L R G + + + Sbjct: 175 EEYIDMCRGPHVPNTRHLRHFKLLKLSGSYWRGNSENESLQRIYGTAWAKEKELNNYLKR 234 Query: 145 GEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 E D + K + + + + I ++ Y E+ Sbjct: 235 IEEAEKRDHRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYIREILKKNDYLEIKT 294 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRF 254 P V +G KF DDMF T ++ +++ + K LP+R Sbjct: 295 PQAVDKSLWEKSGHWEKFRDDMFTTASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRL 354 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 R+E A G++R F + + EE E + E+ K Sbjct: 355 AEFGSCHRNEPSGALH---GLMRVRNFTQDDAHIFCTEEQIQEEVSTFIDLVFEVYKTFG 411 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 ++ L T K E+W + Sbjct: 412 FDEIIIKLSTR----PEKKVGSEEIWDKSEEA 439 >gi|91784428|ref|YP_559634.1| threonyl-tRNA synthetase [Burkholderia xenovorans LB400] gi|123358618|sp|Q13WF7|SYT_BURXL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91688382|gb|ABE31582.1| Ser-tRNA(Thr) hydrolase [Burkholderia xenovorans LB400] Length = 635 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 67/202 (33%), Gaps = 14/202 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + ++ GY E+ P+++ +G Sbjct: 250 LDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + ++H + + LPLR+ R+E+ Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + E+ +E + A + K + + L L Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDHVEIKLS---L 421 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 A D E W + RE Sbjct: 422 RPDARAGTD-ETWDRAEQGLRE 442 >gi|83309439|ref|YP_419703.1| threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] gi|123740560|sp|Q2WAI1|SYT_MAGMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|82944280|dbj|BAE49144.1| Threonyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 638 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 63/238 (26%), Gaps = 11/238 (4%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + +H+ E + + + + A SV Sbjct: 217 QRIYGTAWFDKKELDAYLHMLEEAEKRDHRRLGREMELFHQQEEAAGSVFWHKKGWTLYR 276 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 + + + Y EV P LV +G KF++ MF + Sbjct: 277 AVESYMRRRLEANNYEEVKTPQLVDFSLWEASGHADKFSESMFTIKTQDERHLAVKPMNC 336 Query: 238 NLYSHEII----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 + + LPLR R E A G++R F + + E+ Sbjct: 337 PCHVQIFRQGIKSYRDLPLRMAEFGSCHRYEPSGALH---GIMRVRAFTQDDAHIFCTED 393 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 +E +E+ V A + E W ++ E S Sbjct: 394 QITSETIAFCQLLKEVYTDFGFTDVRVKFSDR----PAKRAGSDETWDKAESALLEAS 447 >gi|88800311|ref|ZP_01115877.1| threonyl-tRNA synthetase [Reinekea sp. MED297] gi|88776888|gb|EAR08097.1| threonyl-tRNA synthetase [Reinekea sp. MED297] Length = 643 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 55/166 (33%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + +HGY E+ P++V +G Sbjct: 251 LDLFHLQEDAPGMVFWHPNGWTMYQVIEQYMRRKQHQHGYQEIKTPMVVDRSLWEKSGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DDMF T ++ +++ + + LPLR R+EA A Sbjct: 311 DKFGDDMFTTHSESRDNAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEASGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E +E + EE+ Sbjct: 371 H---GIMRVRGFVQDDAHIFCTEGQIQSEVASFIGMLEEVYHDFGF 413 >gi|159903594|ref|YP_001550938.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] gi|238687108|sp|A9BAX2|SYT_PROM4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|159888770|gb|ABX08984.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] Length = 638 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 91/284 (32%), Gaps = 41/284 (14%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + I + + Y EV P V +G Sbjct: 250 MDLFHTQEEAPGMVFWHPNGWSIYQVLEKYIRDVLNNNYYQEVKTPQAVDRSLWEKSGHW 309 Query: 213 PKFADDMFCTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DDMF TT + + I +++ + + LP+R R+E A Sbjct: 310 DKFKDDMFTTTSENREYAIKPMNCPCHIQIFNQGLKSYRDLPIRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGD 326 G++R F + + E +E + E+ K + ++ + Sbjct: 370 H---GLMRVRNFVQDDAHIFCTEAQVQSEVSNFIDLVFEVYKSFGFNEIIIKLSTRPKKR 426 Query: 327 LG--------------FSACKTYDLEVWLAGQNLY----REIS--SCST----CGNFQ-- 360 +G K D +L G+ + E S C CG Q Sbjct: 427 VGSEFIWDKSEKALSEALNSKGLDW-SYLPGEGAFYGPKIEFSLKDCLNRVWQCGTIQVD 485 Query: 361 ---SRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENY 400 R+ ++Y D + + L+ + + R + ++ENY Sbjct: 486 FSMPSRLEAKYIDEKGEKKEPV-MLHRAILGSFERFIGILIENY 528 >gi|268594343|ref|ZP_06128510.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268547732|gb|EEZ43150.1| threonyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] Length = 638 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 251 LDLFHLQDEAPGMVFWHPKGWALWRTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 311 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E I K+ H V L L Sbjct: 371 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFHDVSVRLS---LRP 424 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D +VW + RE Sbjct: 425 EKRAGSD-DVWDKAEQGLRE 443 >gi|221639813|ref|YP_002526075.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131] gi|254783534|sp|B9KKC7|SYT_RHOSK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|221160594|gb|ACM01574.1| Threonyl-tRNA synthetase [Rhodobacter sphaeroides KD131] Length = 646 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 50/434 (11%), Positives = 122/434 (28%), Gaps = 57/434 (13%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++++ + +I E ++ + I G V+ ++ Sbjct: 110 DRDETFTPEDLGAIEKRMKEIINAREAVKTELWERARAIAYYEERGEPFKVELVQAIPED 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + + + ++ Sbjct: 170 QSIRMYWHGGWQDLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKT 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 + + +H+ E + + + A V + + Sbjct: 230 RDELKAYLHMLEEAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRL 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 + GY E+ P +V + +G + ++MF + + + + Sbjct: 290 RQAGYKEIRTPQVVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + LPLR R E+ G++R F + + E+ +E Sbjct: 350 VYNQGLKSYRDLPLRLAEFGSCHRYESSG---SMHGLMRVRGFVQDDAHIFCTEDQIESE 406 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCT----------------GDLGFSACKTYDLEVWLA 342 + + K L + L T L + K Sbjct: 407 CAAFIELLSSVYKDLGFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAAYEIDP 466 Query: 343 GQNLYR----------EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLNGSGV 387 G+ + I CG FQ R+ + Y + + + L+ + + Sbjct: 467 GEGAFYGPKLDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHR-PYMLHRAIL 525 Query: 388 AV-GRCLIAILENY 400 R + ++ENY Sbjct: 526 GSFERFIGILIENY 539 >gi|332967802|gb|EGK06905.1| threonine--tRNA ligase [Desmospora sp. 8437] Length = 279 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 9/165 (5%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 + + G F + G E + GY EV PL++ +G + Sbjct: 3 SEEAPGMPFYLPKGMTIRNELESFSRKLQKEA---GYQEVRTPLMMNQRLWEQSGHWDHY 59 Query: 216 ADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 ++M+ T ++ ++ H I + LPLR R E A Sbjct: 60 RENMYFTHVDETAFSIKPMNCPGHMLVFKHGIRSYRDLPLRLAEFGQVHRHELSGALH-- 117 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 GM R F + + R + E + + + I Y Sbjct: 118 -GMFRVRTFTQDDAHIFVRPDQIEAEVQAAMQLVDRIYSVFGFPY 161 >gi|163752580|ref|ZP_02159762.1| threonyl-tRNA synthetase [Shewanella benthica KT99] gi|161327534|gb|EDP98738.1| threonyl-tRNA synthetase [Shewanella benthica KT99] Length = 642 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 104/337 (30%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSA---QIGQAIAEGNLSLVD-ALKNETSTLKEQLPIL 87 +D ++++ + I+ ++ R + ++ + + ++ A + ET + + Sbjct: 105 DIDLEHKLTQEDIDALQKRMTQLAKTNYKVEKRVGSWQVARDTFAARGETYKMAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K++ ++ + + + + + + + S + + + A Sbjct: 165 SKDDQPALYHHEEYVDMCRGPHVPNMRFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALKIHLNRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTLFLELEKFIREK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 ++ Y EV PL++ +G K+++ MF T + P + +++ Sbjct: 285 LGQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTKSENREYVIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + E+ E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEDQVQQEVSACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + + V+ L T + D E+W Sbjct: 402 KMVYDTYATFGFNNIVIKLSTR----PEQRIGDDEMW 434 >gi|134292577|ref|YP_001116313.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|134135734|gb|ABO56848.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4] Length = 402 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 58/180 (32%), Gaps = 8/180 (4%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 + F+ +D + + + + + + I + + G++EV P Sbjct: 1 MDDFDHRVLGNKLDL--FHQQDESPGGIFWHPRGMVLYRVIEEYIRVRMRQAGFSEVRTP 58 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFT 255 ++ + +G KF +MF R + + ++ + LP+R+ Sbjct: 59 QILSRDLWERSGHWEKFGPNMFSLESDRNPYCLKPMSCPCHVQIFKKGSRSYRDLPIRYC 118 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R+E A G++R F + + + + E R + I Sbjct: 119 EFGAVHRAEPSGALH---GLMRARAFTQDDAHVLCLPDQIEDEVARFCKLLKAIYADFGF 175 >gi|320539025|ref|ZP_08038700.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson] gi|320030958|gb|EFW12962.1| threonyl-tRNA synthetase [Serratia symbiotica str. Tucson] Length = 642 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 89/312 (28%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + + ++ + R ++ + + I + ++ S A + E+ + + Sbjct: 105 DVDIERTLTQEDLDLLEKRMHALADKDYDVIKKKVSWQEASDTFAARGESYKVAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ I + + + + S + + + A Sbjct: 165 GHDDRPGLYHHEEYIDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + + Sbjct: 225 DKKQLNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTVFRELEAFVRMK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMGEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQVRAEVNACI 401 Query: 304 SCAEEILKRLDL 315 ++ Sbjct: 402 RMVYDVYATFGF 413 >gi|153870648|ref|ZP_02000004.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS] gi|152072888|gb|EDN69998.1| threonyl-tRNA synthetase, class IIa [Beggiatoa sp. PS] Length = 390 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 61/197 (30%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + Q I +H Y EV P LV +G Sbjct: 5 LDLFHVQEEAPGMVFWHDKGWQIYIIIQNYIRHLLRQHHYQEVHTPQLVDRSLWEKSGHW 64 Query: 213 PKFADDMFCTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DDMF T + + + +++ + + LPLR R+EA Sbjct: 65 DKFGDDMFVTQSENREYAVKPMNCPCHIQIFNQGLKSYRDLPLRLAEFGSCHRNEASG-- 122 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + ++ E + ++ ++ L T Sbjct: 123 -TLHGLMRIRGFVQDDAHIFCTDDQIQQEVSDFIDLLFKVYTDFGFKNILIKLSTR---- 177 Query: 330 SACKTYDLEVWLAGQNL 346 + EVW + Sbjct: 178 PEKRVGSDEVWDKAEKA 194 >gi|56413681|ref|YP_150756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362604|ref|YP_002142241.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|73919824|sp|Q5PH96|SYT_SALPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689908|sp|B5BA42|SYT_SALPK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56127938|gb|AAV77444.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094081|emb|CAR59581.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 642 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RMVYDMYSTFGFEKIVVKLSTR----PDKRIGSDEMW 434 >gi|332558829|ref|ZP_08413151.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] gi|332276541|gb|EGJ21856.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] Length = 646 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 50/434 (11%), Positives = 122/434 (28%), Gaps = 57/434 (13%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++++ + +I E ++ + I G V+ ++ Sbjct: 110 DRDETFTPEDLGAIEKRMKEIINAREAVKTELWERARAIAYYEERGEPFKVELVQAIPED 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + + + ++ Sbjct: 170 QSIRMYWHGGWQDLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKT 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 + + +H+ E + + + A V + + Sbjct: 230 RDELKAYLHMLEEAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRL 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 + GY E+ P +V + +G + ++MF + + + + Sbjct: 290 RQAGYKEIRTPQVVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + LPLR R E+ G++R F + + E+ +E Sbjct: 350 VYNQGLKSYRDLPLRLAEFGSCHRYESSG---SMHGLMRVRGFVQDDAHIFCTEDQIESE 406 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCT----------------GDLGFSACKTYDLEVWLA 342 + + K L + L T L + K Sbjct: 407 CAAFIELLSSVYKDLGFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIKKVGAAYEIDP 466 Query: 343 GQNLYR----------EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLNGSGV 387 G+ + I CG FQ R+ + Y + + + L+ + + Sbjct: 467 GEGAFYGPKLDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHR-PYMLHRAIL 525 Query: 388 AV-GRCLIAILENY 400 R + ++ENY Sbjct: 526 GSFERFIGILIENY 539 >gi|319407312|emb|CBI80953.1| Threonyl-tRNA synthetase [Bartonella sp. 1-1C] Length = 654 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 89/296 (30%), Gaps = 27/296 (9%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNET-- 77 R + + ++++K R +I++ + R S + + I L L + Sbjct: 111 RKQPFTLDDLTTIEKKMREIIQRNQPFRKEI--WSREKAKKIFSEKNELYKVELIDSIPD 168 Query: 78 -STLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 LK Q + S ++ + + + AN +L R G + Sbjct: 169 DQDLKVYYQGDWFDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFTN 228 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHT 187 + + + + E D R + + + + Sbjct: 229 ENDLKAYLHMLEEAEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRL 288 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSLTN----- 238 H Y EV AP ++ +G + ++MF T + + Sbjct: 289 DNHKYAEVQAPQVLDKSLWEISGHWGWYKENMFKTIPAADDWNDECTYALKPMNCPGHVQ 348 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ H + + LP+R R E + G++R F + + EE Sbjct: 349 IFKHGLKSYRDLPVRLAEFGLVHRYEPSGSLH---GLMRVRSFTQDDAHIFCTEEQ 401 >gi|163857146|ref|YP_001631444.1| threonyl-tRNA synthetase [Bordetella petrii DSM 12804] gi|229557977|sp|A9IRH6|SYT_BORPD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|163260874|emb|CAP43176.1| thrS [Bordetella petrii] Length = 650 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 66/209 (31%), Gaps = 6/209 (2%) Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + + + +H+ E D D A + Sbjct: 213 DSNNEMLQRIYGTAWATKDDQDAYLHMLEEAERRDHRKIGRDLDLFHFQDEAPGLIFWHP 272 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 + + +++GY EV AP ++ TG + ++MF T + Sbjct: 273 KGWALWQQVEQYMRAVYNDNGYQEVKAPQILDLSLWKKTGHWDNYRENMFTTESENRVYG 332 Query: 231 TSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 ++ +++ + + LPLR+ R+E + GM+R F + + Sbjct: 333 LKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLH---GMMRVRGFTQDDGH 389 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLH 316 E+ E + +++ + H Sbjct: 390 IFCTEDQLQDECADFTALLQKVYRDFGFH 418 >gi|125624939|ref|YP_001033422.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363] gi|166223350|sp|A2RN48|SYT_LACLM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|124493747|emb|CAL98736.1| ThrS protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071738|gb|ADJ61138.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 646 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 109/335 (32%), Gaps = 24/335 (7%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + + +++ + + ++K E+ ++ R S + + I + ++ ++ Sbjct: 116 DDLATIEAEMKKIVK--ENFKSERKEVSKEEAKEIFASDPYKLELIEEHNEDEGGLTIYT 173 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 + E ++C + + G N + + + S+E E Sbjct: 174 QGEYTDLCRGPHVPSTGVIKFFHLLNVAGAYWRGNSDNKMMQRIYGTAWFSKEELEANLK 233 Query: 148 LGLMDFDRATKLSGA-------------RFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 L +R + G + A + R + +F++D ++GY Sbjct: 234 LREEAKERDHRKLGRELDLFFNDAELGAGTAYWLPAGATIRRIIERFVVDQEV-KNGYQH 292 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKS 249 V P+++ +G + +DM+ D + +Y H + + Sbjct: 293 VITPVMMNLNTYKQSGHWQHYHEDMYPPMDMGDGEEMELRPMNCPSHIAIYKHHVHSYRE 352 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R R E A G+ R + + + E E ++L ++ Sbjct: 353 LPIRIAEFGMMHRYEKSGALS---GLQRVREMTLNDGHTFVMLEQVQEEFSKILQLIMDM 409 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + ++ L D + D E+W Q Sbjct: 410 YRDFGINDYSFRLSYRDPKDTVKYFPDDEMWEKSQ 444 >gi|73667547|ref|YP_303563.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis str. Jake] gi|123745825|sp|Q3YQP0|SYT_EHRCJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72394688|gb|AAZ68965.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ehrlichia canis str. Jake] Length = 633 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 59/168 (35%), Gaps = 6/168 (3%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + + + A V + I +GY EV P+L+ E +G Sbjct: 248 KELELFHIQNEACGQVFWHKKGWTIYRTIENYIRKKLETNGYIEVKTPMLLNKELWEKSG 307 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 KF ++MF + ++ ++ +++ +I + LP+R R EA Sbjct: 308 HWDKFRENMFLSEAEDKVLAIKPMNCPCHIQIFNSKIRSYRDLPIRMAEFGICHRYEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E +E + + E+ K Sbjct: 368 ALH---GLMRVRGFTQDDAHIFCTESQVISEALKFCNLLMEVYKDFGF 412 >gi|289550561|ref|YP_003471465.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315658055|ref|ZP_07910928.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|289180093|gb|ADC87338.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|315496945|gb|EFU85267.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 645 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 115/344 (33%), Gaps = 25/344 (7%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL---SLVDAL-KNETST 79 + S+ +++ + ++ E+ + R S + + + + L+DA+ ++E T Sbjct: 113 KISSDDFEKIEKMMKQIVN--ENHKIERKVVSREEAKEFFKDDPYKLELIDAIPQDEMVT 170 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 L Q + V I + +N +L R G + Sbjct: 171 LYSQGDFTDL-CRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLK 229 Query: 140 EHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 H ++ E D + K L GA + + A + R + ++++D S Sbjct: 230 AHLQLLEERRERDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSM- 288 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH-----EII 245 GY V P+L + +G + DDMF + + + Sbjct: 289 GYDHVYTPVLANVDLYRTSGHWAHYRDDMFPPMKLDENEEMVLRPMNCPHHMMIYKNKPH 348 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LP+R L R EA A G+ R + R + E +R++ Sbjct: 349 SYRELPIRLAELGTMHRYEASGA---VSGLQRVRGMTLNDSHIFVRPDQIKDEFKRVVHM 405 Query: 306 AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 +++ K L D D ++W +++ +E Sbjct: 406 IQDVYKDFGFEDYTFRLSYRDPEDKEKYMDDDDMWNKAESMLKE 449 >gi|45190711|ref|NP_984965.1| AER105Wp [Ashbya gossypii ATCC 10895] gi|44983690|gb|AAS52789.1| AER105Wp [Ashbya gossypii ATCC 10895] Length = 457 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 54/160 (33%), Gaps = 9/160 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + + + L QFM ++ G+ EV PL+ R +G + DDM Sbjct: 52 ISPGSTFFLPNGTKVFNKLIQFMKLQQQNKFGFQEVITPLIYRKSLWEQSGHWENYKDDM 111 Query: 220 FCTTDGRWLIP-TSEVSL-----TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 F + ++ LPLRF+ +P R+EA A Sbjct: 112 FRVEGNDCAKEEYGLKPMNCPGHCVMFKRFDRSYTELPLRFSDFSPLHRNEASGALS--- 168 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 G+ R +F + + E E E+ L + + Sbjct: 169 GLTRVRKFHQDDGHIFCTPEQVEGEIEKCLQLVDLCYGSV 208 >gi|16760562|ref|NP_456179.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141677|ref|NP_805019.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167552305|ref|ZP_02346058.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168239001|ref|ZP_02664059.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168821978|ref|ZP_02833978.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194736705|ref|YP_002114350.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251550|ref|YP_002146704.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|200390235|ref|ZP_03216846.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927743|ref|ZP_03218944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213423451|ref|ZP_03356434.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426331|ref|ZP_03359081.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213852224|ref|ZP_03381756.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238910851|ref|ZP_04654688.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|22654121|sp|Q8Z6I2|SYT_SALTI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690055|sp|B5F7G2|SYT_SALA4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238693694|sp|B4TUF0|SYT_SALSV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|25292951|pir||AC0706 threonine-tRNA ligase (EC 6.1.1.3) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502858|emb|CAD02020.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137305|gb|AAO68868.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194712207|gb|ACF91428.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197215253|gb|ACH52650.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197288252|gb|EDY27637.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199602680|gb|EDZ01226.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323085|gb|EDZ08281.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323017|gb|EDZ10856.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205341550|gb|EDZ28314.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086187|emb|CBY95961.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322620023|gb|EFY16896.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622333|gb|EFY19178.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627857|gb|EFY24647.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633045|gb|EFY29788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636709|gb|EFY33412.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641265|gb|EFY37906.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645254|gb|EFY41783.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650195|gb|EFY46609.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655769|gb|EFY52071.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660095|gb|EFY56334.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665338|gb|EFY61526.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669596|gb|EFY65744.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673522|gb|EFY69624.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677448|gb|EFY73512.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679887|gb|EFY75926.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687359|gb|EFY83331.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192477|gb|EFZ77707.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198668|gb|EFZ83769.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204096|gb|EFZ89110.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208715|gb|EFZ93653.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210228|gb|EFZ95127.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217691|gb|EGA02406.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220245|gb|EGA04700.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223489|gb|EGA07815.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229493|gb|EGA13616.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232716|gb|EGA16812.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240245|gb|EGA24289.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242767|gb|EGA26788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249083|gb|EGA33002.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254416|gb|EGA38233.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255600|gb|EGA39356.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260123|gb|EGA43748.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267113|gb|EGA50598.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271563|gb|EGA54984.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 642 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RMVYDMYSTFGFEKIVVKLSTR----PDKRIGSDEMW 434 >gi|58263294|ref|XP_569057.1| threonine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21] gi|134108684|ref|XP_776995.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259678|gb|EAL22348.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223707|gb|AAW41750.1| threonine-tRNA ligase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 772 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 11/193 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + + L F+ D + + G++EV +P + +G +A+DMF Sbjct: 381 SPGSAFFLPMGMRIYNTLMSFIKDEY-FKRGFSEVGSPNIFNANLWKTSGHWQNYAEDMF 439 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + ++ ++ K LPLRF R+EA A G+ R Sbjct: 440 QLKADEEQLALKPMNCPGHCLIFDARERSYKELPLRFAEFGVLHRNEASGALS---GLTR 496 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 +F + + + E + + K + DL Sbjct: 497 VRRFVQDDAHIFCTPDQVEAELYSAFEFLDAVYK----PFGFTYKVGLSTRNPKKWMGDL 552 Query: 338 EVWLAGQNLYREI 350 E+W + RE+ Sbjct: 553 ELWNKAEGTLREV 565 >gi|116512847|ref|YP_811754.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|122939966|sp|Q02WN1|SYT_LACLS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116108501|gb|ABJ73641.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 646 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 109/335 (32%), Gaps = 24/335 (7%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + + +++ + + ++K E+ ++ R S + + I + ++ ++ Sbjct: 116 DDLATIEAEMKKIVK--ENFKSERKEVSKEEAKEIFANDPYKLELIEEHNEDEGGLTIYT 173 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 + E ++C + + G N + + + S+E E Sbjct: 174 QGEYTDLCRGPHVSSTGVIKFFHLLNVAGAYWRGNSDNKMMQRIYGTAWFSKEELEANLK 233 Query: 148 LGLMDFDRATKLSGA-------------RFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 L +R + G + A + R + +F++D ++GY Sbjct: 234 LREEAKERDHRKLGRELDLFFNDAELGAGTAYWLPAGATIRRIIERFVVDQEV-KNGYQH 292 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKS 249 V P+++ +G + +DM+ D + +Y H + + Sbjct: 293 VITPVMMNLNTYKQSGHWQHYHEDMYPPMDMGDGEEMELRPMNCPSHIAIYKHHVHSYRE 352 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R R E A G+ R + + + E E ++L ++ Sbjct: 353 LPIRIAEFGMMHRYEKSGALS---GLQRVREMTLNDGHTFVMLEQVQEEFSKILQLIMDM 409 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + ++ L D + D E+W Q Sbjct: 410 YRDFGINDYSFRLSYRDPKDTVKYFPDDEMWEKSQ 444 >gi|323499329|ref|ZP_08104306.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] gi|323315717|gb|EGA68751.1| threonyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] Length = 642 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 101/343 (29%), Gaps = 35/343 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D ++ + + +E I R + Q I + DA + T K ++ + Sbjct: 106 DIDLEHSLTQEDLEKIEKRMKELAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENV 165 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEV--------------PIGTSANENILIRSVGKKPS 133 +++ ++ I + + +++ +L R G Sbjct: 166 SRDDRPGLYHHEEYIDMCRGPHVPHMGFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFH 225 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------LH 186 + H E D + K + D Sbjct: 226 DKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRAK 285 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+GY EV PL++ +G K+AD MF T + P + +++ Sbjct: 286 LDEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQG 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E E + Sbjct: 346 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTSCI 402 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + VV L T + E+W + Sbjct: 403 KMVYDTYQTFGFDNIVVKLSTR----PEKRVGSDEIWDQSEEA 441 >gi|15673893|ref|NP_268068.1| theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281492524|ref|YP_003354504.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|22654138|sp|Q9CED2|SYT_LACLA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|12724948|gb|AAK06009.1|AE006421_2 theronyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281376188|gb|ADA65679.1| Threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|326407464|gb|ADZ64535.1| threonyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 646 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 109/335 (32%), Gaps = 24/335 (7%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + + +++ + + ++K E+ ++ R S + + I + ++ ++ Sbjct: 116 DDLATIEAEMKKIVK--ENFKSERKEVSKEEAKEIFANDPYKLELIEEHNEDEGGLTIYT 173 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 + E ++C + + G N + + + ++E E Sbjct: 174 QGEYTDLCRGPHVPSTGVIKFFHLLNVAGAYWRGNSDNKMMQRIYGTAWFTKEELEENLK 233 Query: 148 LGLMDFDRATKLSGA-------------RFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 L +R + G + A + R + +F++D ++GY Sbjct: 234 LREEAKERDHRKLGRELDLFFNDAELGAGTAYWLPAGATIRRIIERFVVDQEV-KNGYQH 292 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKS 249 V P+++ +G + +DM+ D + +Y H + + Sbjct: 293 VITPVMMNLNTYKQSGHWQHYHEDMYPPMDMGDGEEMELRPMNCPSHIAIYKHHVHSYRE 352 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R R E A G+ R + + + E E ++L ++ Sbjct: 353 LPIRIAEFGMMHRYEKSGALS---GLQRVREMTLNDGHTFVMLEQVQEEFSKILQLIMDM 409 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + ++ L D + D E+W Q Sbjct: 410 YRDFGINDYSFRLSYRDPKDTVKYFPDDEMWEKSQ 444 >gi|256751279|ref|ZP_05492159.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256749834|gb|EEU62858.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 634 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 88/314 (28%), Gaps = 32/314 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEK 89 D + E I N + + + ++ + K +L Sbjct: 104 DFDTDRPFTTEDFEAIEQEMNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIP 163 Query: 90 EEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSA 134 E E+ + + + P +L R G Sbjct: 164 EGEEISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPK 223 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 + E+ + E D + K F + L F H Sbjct: 224 KSMLDEYLHMLEEAKKRDHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEH 283 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 +HGY E+ P+++ +E +G + ++M+ T + + P + +Y Sbjct: 284 -MKHGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEIDGETYAIKPMNCPGAMLVYKST 342 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR L R E G++R F + + E E ++ Sbjct: 343 MHSYRDLPLRLCELGLVHRHELSGVLH---GLMRVRSFTQDDAHLFMTPEQVEDEILGVI 399 Query: 304 SCAEEILKRLDLHY 317 + + K Y Sbjct: 400 NLVDYFYKIFGFEY 413 >gi|283457194|ref|YP_003361763.1| seryl-tRNA synthetase [Rothia mucilaginosa DY-18] gi|283133178|dbj|BAI63943.1| seryl-tRNA synthetase [Rothia mucilaginosa DY-18] Length = 54 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 14/25 (56%), Positives = 15/25 (60%) Query: 400 YLNADGSVTIPTVLRPYMNNLAVIK 424 + ADGSV IP LRPYM VI Sbjct: 26 HQQADGSVVIPEALRPYMGGAEVIP 50 >gi|22125796|ref|NP_669219.1| threonyl-tRNA synthetase [Yersinia pestis KIM 10] gi|45442011|ref|NP_993550.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|51596666|ref|YP_070857.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|108807773|ref|YP_651689.1| threonyl-tRNA synthetase [Yersinia pestis Antiqua] gi|108812050|ref|YP_647817.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516] gi|145598020|ref|YP_001162096.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149365658|ref|ZP_01887693.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|153950233|ref|YP_001400689.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162420291|ref|YP_001607032.1| threonyl-tRNA synthetase [Yersinia pestis Angola] gi|165927513|ref|ZP_02223345.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939479|ref|ZP_02228025.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|166011794|ref|ZP_02232692.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166210452|ref|ZP_02236487.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167400748|ref|ZP_02306254.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167424849|ref|ZP_02316602.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024059|ref|YP_001720564.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|186895722|ref|YP_001872834.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|218929522|ref|YP_002347397.1| threonyl-tRNA synthetase [Yersinia pestis CO92] gi|229837960|ref|ZP_04458119.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895121|ref|ZP_04510297.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|229898521|ref|ZP_04513666.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229902362|ref|ZP_04517482.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516] gi|270490458|ref|ZP_06207532.1| threonine--tRNA ligase [Yersinia pestis KIM D27] gi|294503566|ref|YP_003567628.1| threonyl-tRNA synthetase [Yersinia pestis Z176003] gi|22654122|sp|Q8ZDW5|SYT_YERPE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73919846|sp|Q669Z0|SYT_YERPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122979581|sp|Q1C728|SYT_YERPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122980145|sp|Q1CIG3|SYT_YERPN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225518|sp|A4TIL1|SYT_YERPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166987327|sp|A7FHG1|SYT_YERP3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238687259|sp|A9R0A8|SYT_YERPG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238688418|sp|B1JJ17|SYT_YERPY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238691408|sp|B2K668|SYT_YERPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21958722|gb|AAM85470.1|AE013793_6 threonine tRNA synthetase [Yersinia pestis KIM 10] gi|45436874|gb|AAS62427.1| threonyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|51589948|emb|CAH21580.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|108775698|gb|ABG18217.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Yersinia pestis Nepal516] gi|108779686|gb|ABG13744.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Yersinia pestis Antiqua] gi|115348133|emb|CAL21061.1| threonyl-tRNA synthetase [Yersinia pestis CO92] gi|145209716|gb|ABP39123.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149292071|gb|EDM42145.1| threonyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|152961728|gb|ABS49189.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162353106|gb|ABX87054.1| threonyl-tRNA synthetase [Yersinia pestis Angola] gi|165912528|gb|EDR31159.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|165920568|gb|EDR37845.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989259|gb|EDR41560.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166207632|gb|EDR52112.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167049601|gb|EDR61009.1| threonyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056036|gb|EDR65814.1| threonyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750593|gb|ACA68111.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|186698748|gb|ACC89377.1| threonyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|229680697|gb|EEO76793.1| threonyl-tRNA synthetase [Yersinia pestis Nepal516] gi|229688069|gb|EEO80140.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229694326|gb|EEO84373.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701883|gb|EEO89906.1| threonyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|262361608|gb|ACY58329.1| threonyl-tRNA synthetase [Yersinia pestis D106004] gi|262365651|gb|ACY62208.1| threonyl-tRNA synthetase [Yersinia pestis D182038] gi|270338962|gb|EFA49739.1| threonine--tRNA ligase [Yersinia pestis KIM D27] gi|294354025|gb|ADE64366.1| threonyl-tRNA synthetase [Yersinia pestis Z176003] gi|320015090|gb|ADV98661.1| threonyl-tRNA synthetase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 642 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 10/196 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ VV L T Sbjct: 371 H---GLMRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTR---- 423 Query: 330 SACKTYDLEVWLAGQN 345 + E+W ++ Sbjct: 424 PEKRIGSDELWTRAED 439 >gi|149374489|ref|ZP_01892263.1| threonyl-tRNA synthetase [Marinobacter algicola DG893] gi|149361192|gb|EDM49642.1| threonyl-tRNA synthetase [Marinobacter algicola DG893] Length = 641 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 60/196 (30%), Gaps = 10/196 (5%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + +HGY E+ P +V +G KF Sbjct: 254 HMQEEAPGMVFWHPDGWSLYQEIEQYMRGKQHKHGYQEIKTPQVVSRALWEKSGHWDKFK 313 Query: 217 DDMFCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 DDMF T + I +++ + K LPLR R+EA A Sbjct: 314 DDMFTTESEKHDYAIKPMNCPCHVQVFNQGLKSYKDLPLRLAEFGSCHRNEASGALH--- 370 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 G++R F + + E+ E + EI + L T + Sbjct: 371 GLMRVRGFTQDDAHIFCEEDAIQQEVSDFIGMLHEIYADFGFTEILYKLSTR----PEKR 426 Query: 334 TYDLEVWLAGQNLYRE 349 EVW + E Sbjct: 427 VGSDEVWDKSEAALEE 442 >gi|33861154|ref|NP_892715.1| threonyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|73919818|sp|Q7V287|SYT_PROMP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33639886|emb|CAE19056.1| Threonyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 638 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 91/301 (30%), Gaps = 16/301 (5%) Query: 28 EYILSLDEKNRILIKK---IEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 E ++ ++ + LIKK +E ++ + + L +++ + +E + Sbjct: 115 EDLIKIENRINNLIKKNYDVEILQVTKKEAIKTFQERDETFKLRIIEEIPDEGLINLYKH 174 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 + + L ++ L R G + ++ + Sbjct: 175 EEYIDMCRGPHVPNTCHLRHFKLLKLSGSYWRGNSENESLQRIYGTAWAKEKELNDYLKR 234 Query: 145 GEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 E D + K + + + + + +++ Y E+ Sbjct: 235 IEEAEKRDHRKLGKKHSLFHIQEESPGMIFWHPNGWTIYQVLEKYVREILNKNDYLEIKT 294 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRF 254 P V +G KF +DMF T ++ +++ + K LP+R Sbjct: 295 PQAVDKSLWEKSGHWDKFREDMFTTASENRTYAIKPMNCPCHIQVFNQGLKSYKDLPIRL 354 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 R+E A G++R F + + EE E + E+ K Sbjct: 355 AEFGSCHRNEPSGALH---GLMRVRNFTQDDAHIFCTEEQIQAEVSTFIDLVFEVYKTFG 411 Query: 315 L 315 Sbjct: 412 F 412 >gi|326391979|ref|ZP_08213481.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325991980|gb|EGD50470.1| threonyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 634 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 89/314 (28%), Gaps = 32/314 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEK 89 D + + E I N + + + +K + K +L Sbjct: 104 DFDTERPFTTEDFEAIEQEMNRIIKEDYKLERFVLPKDEAIKLMKEKDEPYKVELIEEIP 163 Query: 90 EEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSA 134 E E+ + + + P +L R G Sbjct: 164 EGEEISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPK 223 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 + ++ + E D + K F + L F H Sbjct: 224 KSMLDQYLHMLEEAKKRDHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEH 283 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 +HGY E+ P+++ +E +G + ++M+ T + + P + +Y Sbjct: 284 I-KHGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEIDGETYAIKPMNCPGAMLVYKST 342 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR L R E G++R F + + E E ++ Sbjct: 343 MHSYRDLPLRLCELGLVHRHELSGVLH---GLMRVRSFTQDDAHLFMTPEQVEDEILGVI 399 Query: 304 SCAEEILKRLDLHY 317 + + K Y Sbjct: 400 NLVDYFYKIFGFEY 413 >gi|238765296|ref|ZP_04626223.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] gi|238696469|gb|EEP89259.1| Threonyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] Length = 642 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|212635267|ref|YP_002311792.1| threonyl-tRNA synthetase [Shewanella piezotolerans WP3] gi|226701407|sp|B8CME8|SYT_SHEPW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|212556751|gb|ACJ29205.1| Threonyl-tRNA synthetase, class IIa [Shewanella piezotolerans WP3] Length = 642 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 41/339 (12%), Positives = 99/339 (29%), Gaps = 39/339 (11%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSA---QIGQAIAEGNLSLVD-ALKNETSTLKEQLPIL 87 +D +++ + I+ ++ R + + + + + + E+ ++ + Sbjct: 105 DIDLDHKLTQEDIDALQKRMTQLAKTNYAVDKRVVSWQEARDTFEARGESYKIEILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K+ ++ + + + + + + + S + + + A Sbjct: 165 SKDATPALYHHEEYVDMCRGPHVPNMKFCQNFKLMSVAGAYWRGNSDNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALKVHLNRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYS 241 ++ Y EV PL++ +G K+AD MF T + + +++ Sbjct: 285 LGQYTYQEVKGPLMMDRVLWERSGHWDKYADGMFTTNSES--REYAIKPMNCPGHVQIFN 342 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + + LPLR R+E + G++R F + + EE E Sbjct: 343 QGLKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHVFCTEEQVQQEVSA 399 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + + + VV L T + D ++W Sbjct: 400 CIQMVYDTYETFGFKNIVVKLSTR----PEKRIGDDDMW 434 >gi|213650865|ref|ZP_03380918.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 622 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + E+ + + Sbjct: 85 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RMVYDMYSTFGFEKIVVKLSTR----PDKRIGSDEMW 414 >gi|238749482|ref|ZP_04610987.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380] gi|238712137|gb|EEQ04350.1| Threonyl-tRNA synthetase [Yersinia rohdei ATCC 43380] Length = 642 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|238757782|ref|ZP_04618965.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236] gi|238704025|gb|EEP96559.1| Threonyl-tRNA synthetase [Yersinia aldovae ATCC 35236] Length = 642 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|146340273|ref|YP_001205321.1| putative threonine tRNA synthetase (fragment) [Bradyrhizobium sp. ORS278] gi|146193079|emb|CAL77090.1| putative threonine tRNA synthetase (fragment) [Bradyrhizobium sp. ORS278] Length = 409 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 93/299 (31%), Gaps = 45/299 (15%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 + + +D + A V H + + I GY EV P Sbjct: 1 MDDLDHRSLGPRLDLWHIQE--DAPGMVFWHPRGHALYRVLENFIRGKMRRLGYAEVRTP 58 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFT 255 L+ + +G KF MF +G + +S +++ + + LPLR+ Sbjct: 59 QLLPLDLWMQSGHWEKFGAQMFALGEGERAMALKPMSCPCHVQIFNRNLRSWRELPLRYA 118 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R E A G++R F + + R +D E R + E+ Sbjct: 119 EFGSCHRDEPSGALH---GLMRTRGFEQDDAHVFCRADDVAGEVARFAALLSEVYAAFGF 175 Query: 316 HYRVVSLCT-GDLGFSACKTYD---------------LEVWLAGQNLY----RE------ 349 VSL T L + ++D G+ + E Sbjct: 176 DAPEVSLSTRPQLRAGSDASWDWAEQALAEAARSCGLSYAIQPGEGAFYGPKLEFALRDR 235 Query: 350 ISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFT---HTLNGSGVAVGRCLIAILENY 400 + CG Q R+ + Y + H + GS +GR + +LE++ Sbjct: 236 LGRSWQCGTVQLDSVLPERLGASYVAAHGARATPVLIHHAVLGS---IGRFIAMLLEHH 291 >gi|307266242|ref|ZP_07547784.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918772|gb|EFN49004.1| threonyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 634 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 89/314 (28%), Gaps = 32/314 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEK 89 D + + E I N + + + +K + K +L Sbjct: 104 DFDTERPFTTEDFEAIEQEMNRIIKEDYKLERFVLPKDEAIKLMKEKDEPYKVELIEEIP 163 Query: 90 EEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSA 134 E E+ + + + P +L R G Sbjct: 164 EGEEISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPK 223 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 + ++ + E D + K F + L F H Sbjct: 224 KSMLDQYLHMLEEAKKRDHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEH 283 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 +HGY E+ P+++ +E +G + ++M+ T + + P + +Y Sbjct: 284 I-KHGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEIDGETYAIKPMNCPGAMLVYKST 342 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR L R E G++R F + + E E ++ Sbjct: 343 MHSYRDLPLRLCELGLVHRHELSGVLH---GLMRVRSFTQDDAHLFMTPEQVEDEILGVI 399 Query: 304 SCAEEILKRLDLHY 317 + + K Y Sbjct: 400 NLVDYFYKIFGFEY 413 >gi|169351009|ref|ZP_02867947.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552] gi|169292071|gb|EDS74204.1| hypothetical protein CLOSPI_01786 [Clostridium spiroforme DSM 1552] Length = 606 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 103/315 (32%), Gaps = 24/315 (7%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + + E I ++++ + + K + R R S + + + + +D + N Sbjct: 81 NAVIKDEDIPKIEKEMKKICK--DGKRIVRQEISKEEALEMFKDDEYKIDLINN--FENG 136 Query: 82 EQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + ++ + K N +L R G Sbjct: 137 TNISCYKQGDFVDLCRGPHVETVKACKNFKLTKHSGAYWKGDKNNKVLQRIYGVCFETPE 196 Query: 137 LSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTS 188 EH + E D + K G + L L QF + HT Sbjct: 197 ALEEHLNLLEEAKRRDHKKIGKELGLFMMSEYAPGMPIFLPKGMILRNTLEQFWYEEHTK 256 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEII 245 E GY + P+++ E +G + DDM+ + + P + +Y + + Sbjct: 257 E-GYVFIKTPIMMSRELWETSGHWANYKDDMYTSMVDDREFAIKPMNCPGSLLVYKNGLH 315 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 K LPLR L R EA A G+ R F + + + +E ++++ Sbjct: 316 SYKDLPLRMGELGQVHRHEASGAL---NGLFRVRTFTQDDAHIFMTPDQIESEIIKLINF 372 Query: 306 AEEILKRLDLHYRVV 320 + + L+L Y + Sbjct: 373 IDRVYNSLNLSYEIE 387 >gi|77463957|ref|YP_353461.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter sphaeroides 2.4.1] gi|123757748|sp|Q3J0X4|SYT_RHOS4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77388375|gb|ABA79560.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter sphaeroides 2.4.1] Length = 646 Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 50/434 (11%), Positives = 122/434 (28%), Gaps = 57/434 (13%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++++ + +I E ++ + I G V+ ++ Sbjct: 110 DREETFTPEDLGAIEKRMKEIINAREAVKTELWERARAIAYYEERGEPFKVELVQAIPED 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + + + ++ Sbjct: 170 QSIRMYWHGGWQDLCRGPHLQHTGQVPADAFKLMSVAGAYWRGDSANKQLQRIYGVAFKT 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 + + +H+ E + + + A V + + Sbjct: 230 RDELKAYLHMLEEAAKRDHRKLGREMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRL 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 + GY E+ P +V + +G + ++MF + + + + Sbjct: 290 RQAGYKEIRTPQVVDRKLWEASGHWEAYKENMFIVEVEEEHAKEKRINALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + LPLR R E+ G++R F + + E+ +E Sbjct: 350 VYNQGLKSYRDLPLRLAEFGSCHRYESSG---SMHGLMRVRGFVQDDAHIFCTEDQIESE 406 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCT----------------GDLGFSACKTYDLEVWLA 342 + + K L + L T L + K Sbjct: 407 CAAFIELLSSVYKDLGFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIRKVGAAYEIDP 466 Query: 343 GQNLYR----------EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLNGSGV 387 G+ + I CG FQ R+ + Y + + + L+ + + Sbjct: 467 GEGAFYGPKLDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHR-PYMLHRAIL 525 Query: 388 AV-GRCLIAILENY 400 R + ++ENY Sbjct: 526 GSFERFIGILIENY 539 >gi|312795972|ref|YP_004028894.1| Threonyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454] gi|312167747|emb|CBW74750.1| Threonyl-tRNA synthetase (EC 6.1.1.3) [Burkholderia rhizoxinica HKI 454] Length = 643 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 68/208 (32%), Gaps = 15/208 (7%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + E GY EV P+++ +G Sbjct: 258 LDLFHLQEEAPGLVFWHPKGWALWQQVEQYLRRRLGEAGYLEVKTPMIMDRSLWERSGHW 317 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + ++H + + LPLRF R+EA Sbjct: 318 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFNHSLHSYRDLPLRFAEFGSCHRNEASG 375 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + E+ E S A + K + L L Sbjct: 376 ALH---GLMRVRGFVQDDAHIFCTEDQVIAESIAFNSLAMSVYKDFGFEQIDIKLA---L 429 Query: 328 GFSACKTYDLEVWLAGQNLYRE-ISSCS 354 D E W + RE +++CS Sbjct: 430 RPQQRAGTD-ETWDRAEQGLREALAACS 456 >gi|332161611|ref|YP_004298188.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665841|gb|ADZ42485.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 642 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|318605898|emb|CBY27396.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica Y11] Length = 642 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|313896316|ref|ZP_07829869.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975115|gb|EFR40577.1| threonine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] Length = 639 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 102/314 (32%), Gaps = 22/314 (7%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEG---NLSLVDALKNETSTLKEQ 83 + ++++ + ++K E+++ R S I +G + L++ L + + Sbjct: 118 DLRDIEKEMKKIVK--ENLKLERREIPRSEAIAYFREKGENYKVELIEDLPEDVTISTYT 175 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 + + + S +L R G + Sbjct: 176 QGEFTDLCAGPHVLSTGKVKALRLQSIAGAYWRGSEKNKMLQRIYGTAFEKQEELDAYLH 235 Query: 144 IGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 + E D + + F + L L + ++H +GY+E+ Sbjct: 236 MLEEAEKRDHRKLGRELDLFSLHEEGPGFPFFHPNGMILRNELLNYWREVH-RRYGYSEI 294 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 S P+++ + +G + ++M+ T + + P + +Y ++ + LPL Sbjct: 295 STPVILSRKLWETSGHWFHYRENMYTTQIDEEDYAIKPMNCPGCMLVYRSQLHSYRDLPL 354 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 R L R E A G+ R F + + E E + + +E+ + Sbjct: 355 RLAELGLVHRHELSGALH---GLFRVRNFTQDDAHLFVTPEQIEGEIQHTIDLFDEVYRT 411 Query: 313 LDLHYRVVSLCTGD 326 L Y+ D Sbjct: 412 FGLSYKAELSTRPD 425 >gi|123442189|ref|YP_001006170.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166225517|sp|A1JMJ9|SYT_YERE8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122089150|emb|CAL11992.1| threonyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 642 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|124025364|ref|YP_001014480.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] gi|166225477|sp|A2C155|SYT_PROM1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123960432|gb|ABM75215.1| Threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] Length = 640 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 67/415 (16%), Positives = 131/415 (31%), Gaps = 72/415 (17%) Query: 53 SNSAQIGQAIAEG---NLSLVDALKN--------ETSTLKEQLPILEKEEHEVCSSLKKL 101 +I + I + ++ +V K E L + + + K+E ++ Sbjct: 119 KIEKRIKELINKDYDVDVEVVSPAKATQVFSERGEVFKL-DIIKNIPKDEIIKLYKHEEY 177 Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR--------------EHFEIGEA 147 I + + + + + S + + E+ E Sbjct: 178 IDMCRGPHVPNTRHLRAFKLMKVSGAYWRGDSNNEMLQRIYGTAWKNSKELKEYINRIEE 237 Query: 148 LGLMDFDRATK-------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 D + K A + + Q I S++ Y E+ +P + Sbjct: 238 AEKRDHRKLGKKLSLFHFQEEAPGMIFWHPNGWTIYRVLQDFIRETISKYDYQELKSPQI 297 Query: 201 VRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTL 257 V +G KF +DMF TT + + I +++ + + LP+R + Sbjct: 298 VCRSLWEKSGHWDKFKEDMFTTTSENKEYAIKPMNCPCHVQVFNQGLKSYRDLPIRLSEF 357 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 R+E A G++R F + + E E + + E+ K + Sbjct: 358 GSCHRNEPSGALH---GLMRVRNFVQDDGHIFCTNEQIQEEVQSFIDLVFEVYKAFGFNS 414 Query: 318 RVVSLC--------TGDLGFSACKTYDLEV------W--LAGQNLY----REIS--SCST 355 ++ L + D+ + K + W L G+ + E S C Sbjct: 415 ILIKLSTRPEKRVGSDDVWDKSEKALSDALDSKGLDWSLLPGEGAFYGPKIEFSLKDCLN 474 Query: 356 ----CGNFQ-----SRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENY 400 CG Q R+NS Y D + K L+ + + R + ++ENY Sbjct: 475 RVWQCGTIQVDFSMPERLNSSYIDVDGKKQPPV-MLHRAILGSFERFIGILIENY 528 >gi|78486008|ref|YP_391933.1| threonyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] gi|123769059|sp|Q31F14|SYT_THICR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78364294|gb|ABB42259.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Thiomicrospira crunogena XCL-2] Length = 642 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 86/311 (27%), Gaps = 30/311 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLK-EQLPILE 88 +D + +I + ++ I R + + I E + K K E + + Sbjct: 105 DIDMEEKITPEDLKQIEKRMKELAKTKYEVIKEMTPRAEALATFKERQEDYKVELIEDMP 164 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEV-PIGTSANENILIRSVGKKPSAI------------ 135 E ++ I + + I ++ Sbjct: 165 DETEFGLYHHQEYIDMCRGPHVPNMGFIKAFKLTHVAGAYWRGNSDNKMLQRIYGVAFAD 224 Query: 136 -HLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHT 187 +++ + E D + K A + + + Sbjct: 225 KQELKDYLRMMEEAEKRDHRKLGKSLDLFHVDELAPGMAFWHPKGSTLYRVVENYMRQQL 284 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEI 244 E+ Y E+ PL++ +G KF D+MF T + P + +Y+H + Sbjct: 285 VENDYQEIRTPLIMDRTLWEKSGHWDKFKDNMFTTETENRDYAVKPMNCPGHIQVYNHNL 344 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LP+R R+E G++R F + + E E + + Sbjct: 345 SSYRDLPIRLAEFGLVHRNEPSG---TLHGLMRVRSFTQDDAHIFCTPEQIKEEVQACID 401 Query: 305 CAEEILKRLDL 315 Sbjct: 402 LVFNTYADFGF 412 >gi|238797380|ref|ZP_04640880.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] gi|238718811|gb|EEQ10627.1| Threonyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] Length = 642 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|213623005|ref|ZP_03375788.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 523 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RMVYDMYSTFGFEKIVVKLSTR----PDKRIGSDEMW 434 >gi|291563461|emb|CBL42277.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [butyrate-producing bacterium SS3/4] Length = 646 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 103/333 (30%), Gaps = 35/333 (10%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKI------EDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 R S+ + ++ + + +IK+ E RA + S + E N L Sbjct: 106 DRDEPVTSDDLAKIEAEMKKIIKEALPLERFELPRAE--AIS-----LMKEKNEPYKVEL 158 Query: 74 KNETSTLK-----EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 + +Q + + K++ + + S +L R Sbjct: 159 IEDLPEDSIISFYKQGEFTDLCAGPHLMNTKEVGKAFKLMNIAGAYWRGSEKNKMLTRIY 218 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKL--------SGARFSVLTGHLAHLERALGQ 180 + + + E D + K +G F L+ L Sbjct: 219 ATAFAKKEDLDAYVTMMEEAKKRDHRKLGKELGLFMMSDAGPGFPFFLPKGMVLKNTLLD 278 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLT 237 + ++H + GY E+S P+++ +G + ++M+ T + + P + Sbjct: 279 YWREIH-KKAGYVEISTPIILNRSLWETSGHWDHYKNNMYTTIIDGEDYAIKPMNCPGGV 337 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +Y+ E + LPLR L R E G++R F + + E Sbjct: 338 LVYASEPRSYRDLPLRMGELGIVHRHEKSG---QLHGLMRVRCFTQDDAHIFMTPEQIRD 394 Query: 298 EHERMLS--CAEEILKRLDLHYRVVSLCTGDLG 328 E + + L H + + +G Sbjct: 395 EIKNVAGLINQVYSLFGFKYHVELSTRPEDSMG 427 >gi|260655005|ref|ZP_05860493.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1] gi|260630320|gb|EEX48514.1| threonine--tRNA ligase [Jonquetella anthropi E3_33 E1] Length = 623 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 88/308 (28%), Gaps = 28/308 (9%) Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIG 116 Q E + + + + + K + + + + Sbjct: 129 QLFKERKDPYKVEILEGVTDPQVNVYWQDTYVDLCRGPHVPNTKFLRHVKLLSVAGAYWR 188 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLT 168 + +L R G + + E D + K F Sbjct: 189 GDEHNIMLTRIYGTTFDTAEGLETYLKRMEEAKKRDHRKIGKEMDLFSFHKEGIGFPFFH 248 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL 228 + +L F LHT +GY+E P+++ + +G + +M+ TT Sbjct: 249 PKGMVVMNSLLDFWRRLHT-LNGYSEARTPMILNRDLWVQSGHWDHYQQNMYFTTIDEMP 307 Query: 229 IPTSEV---SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 + +Y + K P+R L R E + G++R F + + Sbjct: 308 CAIKPMNCPGGILIYKDRLHSYKEFPIRLAELGHVHRHEKTG---ELHGLMRVRSFTQDD 364 Query: 286 LVSITREEDSFTEHERMLSCAEEILKR---LDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 E E + +++ + + + H + + +G E+W Sbjct: 365 AHHFCTPEQIKDEVKFIMALDDYVYSKVFGFKYHVELSTRPDNSIG-------SDELWAT 417 Query: 343 GQNLYREI 350 + +E Sbjct: 418 AEKALQET 425 >gi|237747667|ref|ZP_04578147.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13] gi|229379029|gb|EEO29120.1| threonyl-tRNA synthetase [Oxalobacter formigenes OXCC13] Length = 635 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 64/209 (30%), Gaps = 13/209 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + E+GY EV P ++ +G Sbjct: 250 LDLFHFQDEAPGLIFWHAKGWTIWQQVEQYMRRVYQENGYQEVKGPQILDRSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T + ++ +Y + + LPLR+ R+E + Sbjct: 310 DNYKENMFTTESENRIYALKPMNCPGHVQIYRSNLHSYRELPLRYGEFGQCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 GM+R F + + E+ E +++ + + + T Sbjct: 370 H---GMMRVRGFTQDDGHIFCTEDQILDECVAFTDLLKKVYQDFGFTDIIYKIATR---- 422 Query: 330 SACKTYDLEVWLAGQNLY---REISSCST 355 + E W +N E S CS Sbjct: 423 PEKRVGSDEAWDKAENALIQSLERSGCSY 451 >gi|237745470|ref|ZP_04575950.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gi|229376821|gb|EEO26912.1| threonyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] Length = 650 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 63/208 (30%), Gaps = 10/208 (4%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + ++GY EV P ++ +G Sbjct: 265 LDLFHFQDEAPGLIFWHPKGWTIWQQVEQYMRKVYRDNGYQEVKGPQILDRSLWEKSGHW 324 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T + ++ +Y + + LPLR+ R+E + Sbjct: 325 DNYKENMFTTESENRVYAIKPMNCPGHVQIYRSNLHSYRELPLRYGEFGQCHRNEPSGSL 384 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 GM+R F + + E+ E +++ K + + T Sbjct: 385 H---GMMRVRGFTQDDGHIFCTEDQILDECVAFTDLLKKVYKDFGFTDIIYKVATR---- 437 Query: 330 SACKTYDLEVWLAGQNLYREISSCSTCG 357 + E W +N E S C Sbjct: 438 PEKRVGSDEAWDKAENALIESLKRSGCE 465 >gi|70726243|ref|YP_253157.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|68446967|dbj|BAE04551.1| threonyl-tRNA synthetase 1 [Staphylococcus haemolyticus JCSC1435] Length = 645 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 101/352 (28%), Gaps = 39/352 (11%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 + S+ +++ + ++ E+ + R S + ++ + + ++ L + Sbjct: 112 EKVSSDDFEKIEKTMKQIVD--ENHKIERKVVSREEAKSFFKDDPYKLE--------LID 161 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHF 142 +P E L + ++ + + Sbjct: 162 AIPEDESVTLYSQGEFTDLCRGVHVPSTSKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTA 221 Query: 143 EIGEALGLMDFD--------------------RATKLSGARFSVLTGHLAHLERALGQFM 182 + + +L GA + + A + R + +++ Sbjct: 222 FFDKKDLKAHLEMLEERRERDHRRIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYI 281 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH 242 +D S GY V P+L E +G + DDMF + + Sbjct: 282 VDKEVSM-GYDHVYTPVLANVELYKTSGHWDHYRDDMFPPMKLDETEEMVLRPMNCPHHM 340 Query: 243 -----EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 + LP+R L R EA A G+ R + R + Sbjct: 341 MVYNNRPHSYRELPIRIAELGTMHRYEASGA---VSGLQRVRGMTLNDSHIFVRPDQIKD 397 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E +R+++ +E+ L D D E+W + + +E Sbjct: 398 EFKRVVNMIQEVYSDFGFEDYTFRLSYRDPEDKEKYMDDDEMWNKAETMLKE 449 >gi|238783384|ref|ZP_04627407.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] gi|238715629|gb|EEQ07618.1| Threonyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] Length = 642 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRLAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|284006267|emb|CBA71503.1| threonyl-tRNA synthetase [Arsenophonus nasoniae] Length = 640 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 92/321 (28%), Gaps = 39/321 (12%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETS 78 + E+ L + +E + R + + + I + ++ + E Sbjct: 104 YDVDLEHAL--------TQEDLEKLEQRMHELAEKNYDVIKKRVSWQEARDTFVARGEDY 155 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 +K + K++H ++ I + + + + + S + Sbjct: 156 KVKILDENINKDDHPRLYYHEEYIDMCRGPHVPNMRFCHYFKLQKVAGAYWRGNSDNKML 215 Query: 139 REHFEIGEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERA 177 + + A D A + + Sbjct: 216 QRIYGTAWANKKQLAAYLLRLEEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWVIFR 275 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEV 234 + I +E+ Y EV PL++ TG + ++MF T + P + Sbjct: 276 ELETFIRTKLNEYRYQEVKGPLMMDRILWEKTGHWENYKENMFTTSSENREYCIKPMNCP 335 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +++ + + LPLR R+E A G++R F + + E+ Sbjct: 336 GHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEDQ 392 Query: 295 SFTEHERMLSCAEEILKRLDL 315 TE + + + Sbjct: 393 ILTEVKSCIKMIYHVYATFGF 413 >gi|261250893|ref|ZP_05943467.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891] gi|260937766|gb|EEX93754.1| threonyl-tRNA synthetase [Vibrio orientalis CIP 102891] Length = 642 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 101/343 (29%), Gaps = 35/343 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D + + + +E I R + Q I + DA + T K ++ + Sbjct: 106 DIDLEYSLTQEDLEKIEKRMKELAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENV 165 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEV--------------PIGTSANENILIRSVGKKPS 133 +++ ++ I + + +++ +L R G Sbjct: 166 SRDDRPGLYHHEEYIDMCRGPHVPHMGFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFH 225 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------LH 186 + H E D + K + D Sbjct: 226 DKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVREK 285 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +E+GY EV PL++ +G K+A+ MF T L P + +++ Sbjct: 286 LTEYGYQEVKGPLIMDRVLWERSGHWDKYAEAMFTTSSENREYALKPMNCPGHVQIFNQG 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E E + Sbjct: 346 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTSCI 402 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + VV L T + E+W + Sbjct: 403 KMVYDTYQTFGFDNIVVKLSTR----PEKRVGSDEIWDQSEEA 441 >gi|254511025|ref|ZP_05123092.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] gi|221534736|gb|EEE37724.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] Length = 652 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 66/223 (29%), Gaps = 12/223 (5%) Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + K + +H+ E + + D A + Sbjct: 217 DSDRAMLQRIYGVAFTGKEKLKAHLHMLEEAAKRDHRKLGREMDLFHMQEEAPGQIFWHP 276 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGR 226 Q + GY EV+ P +V + +G K+ ++MF R Sbjct: 277 NGWKIYTTLQDYMRRMQDRDGYVEVNTPQVVDRKLWEASGHWDKYQENMFIVEVDEEHAR 336 Query: 227 WLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + + ++ + LPLR R E A G++R F Sbjct: 337 EKAINALKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGF 393 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 + + E+ +E + ++ ++ L H + L T Sbjct: 394 TQDDGHIFCSEDQIESETAKFIAFLSKVYADLGFHDWTIKLST 436 >gi|183221772|ref|YP_001839768.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911846|ref|YP_001963401.1| threonyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776522|gb|ABZ94823.1| Threonine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780194|gb|ABZ98492.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase; ThrRS) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 638 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 80/303 (26%), Gaps = 19/303 (6%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLKEQLP 85 + + ++ + ++K ED+ +R S + + L L Sbjct: 121 VDDLPKIEAEMAKIVK--EDLTVKRWELSKEEAIEKFKKENEPYKVELIQGFDAASVSLY 178 Query: 86 ILEKEEHEVCSSLKKLI---SCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHF 142 + + + L R G L E+ Sbjct: 179 GQGEWYDLCRGPHVARTGQLKAFKLTAISGAYWKGDSKNKQLTRIYGVSFPTKKLLDEYI 238 Query: 143 EIGEALGLMDFDRATK-------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 + E D + K A + I GY E+ Sbjct: 239 FLIEEAKKRDHRKLGKELDLFSFQDEAPGFPFWHPKGTVLWNTLASYIREECFRRGYQEI 298 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV---SLTNLYSHEIIESKSLPL 252 P ++ +G F ++M+ T + +Y + + + LPL Sbjct: 299 KTPAILNSSLWKKSGHWDNFKENMYFTDIDESEFAVKPMNCPGCCLIYKYHMHSYRELPL 358 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 RF L R E G+ R F + + + +E E ++ ++ K+ Sbjct: 359 RFMELGNVHRHEMSGVLH---GLFRVRAFTQDDAHIYAPLDKVESEVEDIIDFTFDVYKK 415 Query: 313 LDL 315 Sbjct: 416 FGF 418 >gi|296536619|ref|ZP_06898695.1| threonine--tRNA ligase [Roseomonas cervicalis ATCC 49957] gi|296263053|gb|EFH09602.1| threonine--tRNA ligase [Roseomonas cervicalis ATCC 49957] Length = 660 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 90/348 (25%), Gaps = 26/348 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R+ E ++ K R +I + + I A+G + +++ + Sbjct: 108 RNEPFTPEDFPKIEAKMREIIARNAAFQREVWPREQAIAFFEAKGERYKAELIRDLPVDV 167 Query: 81 KEQLPILEKEEHEVCSSLK----KLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + + + S + + +L R Sbjct: 168 PISIYRQGEWLDLCRGPHMRSTGDIGSAFKLMKVAGAYWRGDHRNAMLSRIYATAWRDQK 227 Query: 137 LSREHFEIGEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHTSE 189 + E D + K A S+ Q + Sbjct: 228 ELDAYLHQLEEAERRDHRKIGKEMGLFHLQEEAVGSIFWHPKGWRLYTTLQDYMRRRQEA 287 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEI----- 244 GY EV P LV + +G K+ ++MF T ++L + Sbjct: 288 GGYQEVRTPQLVDRKLWEASGHWDKYRENMFIATVDDESEKDRVLALKPMNCPCHVQIFN 347 Query: 245 ---IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + LPLR R E A G++R F + + E+ E Sbjct: 348 HGLRSYRELPLRMAEFGACHRYEPSGALH---GIMRVRSFVQDDAHIFCAEDQIAAETVE 404 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 ++ + + L V + E W + +E Sbjct: 405 FVALLSAVYRDLGFTDFRVKFSDR----PEKRAGSDETWDRSEGALKE 448 >gi|187932904|ref|YP_001884583.1| threonyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|238691610|sp|B2TIT5|SYT_CLOBB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187721057|gb|ACD22278.1| threonine--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 643 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 101/339 (29%), Gaps = 33/339 (9%) Query: 42 KKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + +E + A + ++ +K+E ++ + E E + Sbjct: 115 QDLEKLEAEMKKIIKENPSIEKFELPRNEALELMKDEPYKVELINDLGEDEIISFYKLGE 174 Query: 100 KLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI-------------HLSREHFEIGE 146 C + PI E+ + E Sbjct: 175 FTDLCAGPHVMSLKPIKAIKLIRSAGAYWKGDEKNKMLTRIYGTAFLKKSELDEYLDAVE 234 Query: 147 ALGLMD---FDRATKLSGARFSVLTGHLAHLER-----ALGQFMIDLHTSEHGYTEVSAP 198 D R KL +V G + + Q ++ GY P Sbjct: 235 EAKKRDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQTLQRWVEDEEERRGYVLTKTP 294 Query: 199 LLVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTN-LYSHEIIESKSLPL 252 L+ + + +G + D MF + + + +Y+ E + LP+ Sbjct: 295 LMAKSDLYKISGHWDHYKDGMFVLGDEEKDEEVFALRPMTCPFQYTIYNAEQHSYRDLPI 354 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 R+ + FR+E+ + G++R QF + I E E + +L + ++K Sbjct: 355 RYGETSTLFRNESSG---EMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVLELIQYLMKT 411 Query: 313 LDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 L + + + D + D E W Q+ R I Sbjct: 412 LGIDEDISYRFSKWDPNNTEKYINDPEAWNKTQDTMRTI 450 >gi|113460987|ref|YP_719054.1| threonyl-tRNA synthetase [Haemophilus somnus 129PT] gi|123031343|sp|Q0I3M2|SYT_HAES1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|112823030|gb|ABI25119.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Haemophilus somnus 129PT] Length = 642 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 87/312 (27%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + I+ + R + I + ++ + E + + Sbjct: 105 DIDLDRSLTQEDIDTLEKRMLELAKTNYDVIKKRVSWQEARDTFESRAEPYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR-------- 139 K++ ++ I + + + + + S + + Sbjct: 165 AKDDQPALYHHEEYIDMCRGPHVPNMRFCHHFKLMKVAGAYWRGNSDNKMLQRIYGTAWA 224 Query: 140 ------EHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 ++ E D D A V + + + Sbjct: 225 DKKQLADYLHRLEEAAKRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG +AD MF T + P + +++ Sbjct: 285 LKEYDYQEVKGPFMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP+R R+E + G++R F + + E+ +E + Sbjct: 345 LKSYRDLPIRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEDQIESEVTSCI 401 Query: 304 SCAEEILKRLDL 315 +I Sbjct: 402 KMVYDIYSTFGF 413 >gi|149200873|ref|ZP_01877848.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035] gi|149145206|gb|EDM33232.1| threonyl-tRNA synthetase [Roseovarius sp. TM1035] Length = 648 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 80/288 (27%), Gaps = 33/288 (11%) Query: 79 TLKEQLPILEKEEHEVCSSLKK-----LISCIPNVPLEEV--------PIGTSANENILI 125 L E +P E + + VP + + +L Sbjct: 161 ELIEAIPGSEPLRMYWHGDWQDLCRGPHLQNTGQVPADAFKLMSVAGAYWRGDSTRPMLQ 220 Query: 126 RSVGKKPSAIHLSREHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERAL 178 R G +++ E D D A V Sbjct: 221 RIYGVAFQNRDALKDYLNFLEEADRRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTVYTT 280 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEV 234 Q + GY EV+ P +V + +G K+ ++MF R + Sbjct: 281 LQDYMRRQQRRGGYVEVNTPQVVDRKLWERSGHWEKYQENMFIVEVDEDHAREKAVNALK 340 Query: 235 SLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 + +I + LPLR R E A G++R F + + Sbjct: 341 PMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDAHIF 397 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLH-YRVVSLCTGDLGFSACKTYD 336 E+ +E R ++ I L + V+ D+ + + +D Sbjct: 398 CTEDQIESETARFITFLSGIYTDLGFPNFEVLFSTRPDVRAGSDEVWD 445 >gi|43066|emb|CAA23560.1| unnamed protein product [Escherichia coli] Length = 642 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHRFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|170695920|ref|ZP_02887060.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M] gi|170139218|gb|EDT07406.1| threonyl-tRNA synthetase [Burkholderia graminis C4D1M] Length = 635 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 66/202 (32%), Gaps = 14/202 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + ++ GY E+ P+++ +G Sbjct: 250 LDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + ++H + + LPLR+ R+E+ Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + E+ +E + A + + + L L Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYSDFGFDHVEIKLS---L 421 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 A D E W + RE Sbjct: 422 RPDARAGTD-ETWDRAEQGLRE 442 >gi|300722778|ref|YP_003712069.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061] gi|297629286|emb|CBJ89885.1| threonine tRNA synthetase [Xenorhabdus nematophila ATCC 19061] Length = 642 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 86/322 (26%), Gaps = 41/322 (12%) Query: 23 LEPQSEYILSLDEKNRILIKK-IEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETST 79 + + R L K+ IE + R + + I + DA Sbjct: 104 YDVDLD---------RSLTKEDIELLEKRMLELAKKDYDVIKKKVTWQEARDAFVARGEE 154 Query: 80 LKEQL--PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 K Q+ + ++H ++ + + + + + + S + Sbjct: 155 YKIQILDENISHDDHPGLYHHEEYVDMCRGPHVPNMRFCHHFKLQKVAGAYWRGNSDNKM 214 Query: 138 SREHFEIGEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLER 176 + + A D A + Sbjct: 215 LQRIYGTAWADKKQLNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIF 274 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSE 233 + + E+ Y EV P ++ TG + ++MF T + P + Sbjct: 275 RELETFVRTKLKEYQYQEVKGPFMMDRIMWEKTGHWENYKENMFTTSSENREYCVKPMNC 334 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +++ + + LPLR R+E A G++R F + + E+ Sbjct: 335 PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTED 391 Query: 294 DSFTEHERMLSCAEEILKRLDL 315 E + ++ Sbjct: 392 QILQEVSSCIKMIYDVYGTFGF 413 >gi|207110731|ref|ZP_03244893.1| seryl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 67 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 38/67 (56%), Gaps = 2/67 (2%) Query: 1 MLDIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 M+D + + Q+ + + ++LKKR+ ++ + E + + + + ++E ++A +N S + Sbjct: 1 MIDRKLLLQDFDKVALSLKKRNNAMDDELERLREVITHYKKQLIELESLQAFQNKVSKEF 60 Query: 59 GQAIAEG 65 G +A+ Sbjct: 61 GIKMAQK 67 >gi|303229391|ref|ZP_07316181.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302515927|gb|EFL57879.1| threonine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 636 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 9/189 (4%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 K G F L L F ++H + Y E+ P+++ +G + Sbjct: 256 VIKEEGPGFPFFLPKGMALRNELENFWREVH-HDFEYDEIRTPIILNKHLWETSGHWDHY 314 Query: 216 ADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 ++M+ T + + P + +Y +E+ + LPLR+ L R E A Sbjct: 315 RENMYTTIIDDEEYAIKPMNCPGGILVYQNEMHSYRDLPLRYAELGLVHRHELSGALH-- 372 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL--DLHYRVVSLCTGDLGFS 330 G+ R F + + E +E +++ + I + H + + +G Sbjct: 373 -GLFRVRAFTQDDAHVFMLPEQMQSELMKVIELFDRIYSQFGLKYHVELSTKPDNAMGDD 431 Query: 331 ACKTYDLEV 339 A E Sbjct: 432 AIWEAATEA 440 >gi|259908578|ref|YP_002648934.1| threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|224964200|emb|CAX55707.1| Threonyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|283478547|emb|CAY74463.1| thrS [Erwinia pyrifoliae DSM 12163] Length = 642 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 84/312 (26%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + IE + R + + I + ++ A + E + + Sbjct: 105 DVDIDRTLTQEDIEQLEKRMHQLAETNYDVIKKNVSWQEARDAFAARGENYKMTILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + + S+ + + + A Sbjct: 165 SHDDRPGLYHHQEYVDMCRGPHVPNMRFCHHFKLQKISGAYWRGDSSNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKQLAAYLLRIEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + + MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKEAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCI 401 Query: 304 SCAEEILKRLDL 315 + Sbjct: 402 KMVYDTYSTFGF 413 >gi|226489500|emb|CAX75894.1| Seryl tRNA Synthetase [Schistosoma japonicum] Length = 174 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 31/152 (20%) Query: 2 LDIQWIRQN----PEHLDIALKKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R + P+ + KR + ++ DE R + + + +N S Sbjct: 3 LDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLCSK 62 Query: 57 QIGQAIAEGNLSL--------------------------VDALKNETSTLKEQLPILEKE 90 I + I + S + LK+ + + E++ Sbjct: 63 AIAKRIKDNEDSPDCEITIFKGVLERLDSLADVDLQPLSIAQLKSLSCFIDEEIKTNAAS 122 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E+ S + + I N+ +VPI +N Sbjct: 123 LIELESIRQHHLYEIGNLLHPDVPISKDEEDN 154 >gi|238650420|ref|YP_002916272.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic] gi|259516667|sp|C4K0X3|SYT_RICPU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238624518|gb|ACR47224.1| threonyl-tRNA synthetase [Rickettsia peacockii str. Rustic] Length = 635 Score = 58.6 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 63/202 (31%), Gaps = 10/202 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A+ V + I ++GYTEV P+LV +G Sbjct: 248 RELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASG 307 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 KF DDMF + ++ ++ I + LPLR + R+EA Sbjct: 308 HWEKFRDDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R + + E E E+ K V Sbjct: 368 ALH---GLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDR-- 422 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 + EVW +N +E Sbjct: 423 --PEIRAGSNEVWDKAENALKE 442 >gi|72381873|ref|YP_291228.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] gi|123759915|sp|Q46LV3|SYT_PROMT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72001723|gb|AAZ57525.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Prochlorococcus marinus str. NATL2A] Length = 641 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 96/275 (34%), Gaps = 39/275 (14%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + I +++ Y EV +P +V +G KF +DMF Sbjct: 258 EAPGMVFWHPKGWTIYRILEDFIRETITKYDYQEVKSPQVVDRSLWEKSGHWDKFKEDMF 317 Query: 221 CTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 TT + + I +++ + + LP+R + R+E A G++R Sbjct: 318 TTTSENREYAIKPMNCPCHIQIFNQGLKSYRDLPIRLSEFGSCHRNEPSGALH---GLMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC--------TGDLGF 329 F + + +E E + + E+ K ++ L + D+ Sbjct: 375 VRNFVQDDAHIFCTDEQIQEEVQNFIDLVFEVYKTFGFDSILIKLSTRPVKRVGSDDIWD 434 Query: 330 SACKTYDLEV------W--LAGQNLY----REIS--SCST----CGNFQ-----SRRMNS 366 + K + W L G+ + E S C CG Q +R+N+ Sbjct: 435 KSEKALSEALDSKGLDWSLLPGEGAFYGPKIEFSLKDCLNRVWQCGTIQVDFSMPQRLNA 494 Query: 367 RYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENY 400 Y D + L+ + + R + ++ENY Sbjct: 495 SYIDITGRKQTPV-MLHRAILGSFERFIGILIENY 528 >gi|53805116|ref|YP_113204.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|73919805|sp|Q60AZ3|SYT_METCA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|53758877|gb|AAU93168.1| threonyl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 638 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 63/191 (32%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ PL+V +G Sbjct: 250 LDLFHMQEEAPGMVFWHPKGWILWQEIEQYMRRVFRDNGYQEIRTPLVVARTLWERSGHW 309 Query: 213 PKFADDMFCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF+D+MF T + + I +Y+ + + LPLR R+E A Sbjct: 310 EKFSDEMFTTASEERDYAIKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRNELSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E R + ++ + L T Sbjct: 370 H---GLMRVRGFTQDDAHIFCTEEQIQDEVSRFIDLLFKVYADFGFSEVQIKLSTR---- 422 Query: 330 SACKTYDLEVW 340 + EVW Sbjct: 423 PEKRVGSDEVW 433 >gi|85705178|ref|ZP_01036278.1| threonyl-tRNA synthetase [Roseovarius sp. 217] gi|85670500|gb|EAQ25361.1| threonyl-tRNA synthetase [Roseovarius sp. 217] Length = 648 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 61/196 (31%), Gaps = 13/196 (6%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A V Q + GY EV+ P +V + +G Sbjct: 253 REMDLFHMQEEAPGQVFWHPNGWTVYTTLQDYMRRQQRRGGYVEVNTPQVVDRKLWEASG 312 Query: 211 QIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSF 261 K+ ++MF R + + +I + LPLR Sbjct: 313 HWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCN 372 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH-YRVV 320 R E A G++R F + + E+ +E R ++ I L + V+ Sbjct: 373 RYEPSGALH---GIMRVRGFTQDDAHIFCTEDQIESETARFIAFLSGIYADLGFPNFEVL 429 Query: 321 SLCTGDLGFSACKTYD 336 D+ + + +D Sbjct: 430 FSTRPDVRAGSDEVWD 445 >gi|303230749|ref|ZP_07317496.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302514509|gb|EFL56504.1| threonine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 636 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 9/189 (4%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 K G F L L F ++H + Y E+ P+++ +G + Sbjct: 256 VIKEEGPGFPFFLPKGMALRNELENFWREVH-HDFEYDEIRTPIILNKHLWETSGHWDHY 314 Query: 216 ADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 ++M+ T + + P + +Y +E+ + LPLR+ L R E A Sbjct: 315 RENMYTTIIDDEEYAIKPMNCPGGILVYQNEMHSYRDLPLRYAELGLVHRHELSGALH-- 372 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL--DLHYRVVSLCTGDLGFS 330 G+ R F + + E +E +++ + I + H + + +G Sbjct: 373 -GLFRVRAFTQDDAHVFMLPEQMQSELMKVIELFDRIYSQFGLKYHVELSTKPDNAMGDD 431 Query: 331 ACKTYDLEV 339 A E Sbjct: 432 AIWEAATEA 440 >gi|114332291|ref|YP_748513.1| threonyl-tRNA synthetase [Nitrosomonas eutropha C91] gi|122313048|sp|Q0ADN4|SYT_NITEC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114309305|gb|ABI60548.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Nitrosomonas eutropha C91] Length = 635 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 6/175 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + +++GY E+ P ++ +G Sbjct: 250 LDLFHMQEEAPGMVYWHPKGWAIWQQIEQYMRQVLAKNGYVEIRTPQVLDISLWEKSGHW 309 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 F ++MF T + P + +++H + + LPLR R+EA A Sbjct: 310 ENFRENMFITESESRHYAIKPMNCPGHVQVFNHGLRSYRDLPLRLAEFGSCHRNEASGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E+ E + + ++ H ++ L T Sbjct: 370 H---GLMRVRSFTQDDAHIFCTEDQVLEEVTKFIDLLNQVYIDFGFHENLIKLST 421 >gi|241758603|ref|ZP_04756718.1| threonine--tRNA ligase [Neisseria flavescens SK114] gi|241321255|gb|EER57427.1| threonine--tRNA ligase [Neisseria flavescens SK114] Length = 637 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNVAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ E I K+ H Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFH 413 >gi|121634517|ref|YP_974762.1| threonyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|120866223|emb|CAM09963.1| putative threonyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|325131827|gb|EGC54527.1| threonyl-tRNA synthetase [Neisseria meningitidis M6190] Length = 648 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 261 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 320 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 321 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ +E I K+ H Sbjct: 381 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 424 >gi|325137877|gb|EGC60452.1| threonyl-tRNA synthetase [Neisseria meningitidis ES14902] Length = 637 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ +E I K+ H Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413 >gi|319637847|ref|ZP_07992613.1| threonyl-tRNA synthetase [Neisseria mucosa C102] gi|317401002|gb|EFV81657.1| threonyl-tRNA synthetase [Neisseria mucosa C102] Length = 637 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ E I K+ H Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFH 413 >gi|157145991|ref|YP_001453310.1| threonyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895] gi|157083196|gb|ABV12874.1| hypothetical protein CKO_01745 [Citrobacter koseri ATCC BAA-895] Length = 622 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + ++ + R + + + I + ++ + ET + + Sbjct: 85 DIDLDRTLTQEDVDALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGETYKVSILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKSLNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RMVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 414 >gi|168233251|ref|ZP_02658309.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472380|ref|ZP_03078364.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458744|gb|EDX47583.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332671|gb|EDZ19435.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 89/340 (26%), Gaps = 41/340 (12%) Query: 32 SLDEKNRILIKKIEDIRARRNSNS-AQIGQAIAEGNLSLVDALKNE------TSTLKEQL 84 +D + + +E + R + + + + + + L E + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVAILDENI 164 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 +K ++ + + + + + S + + + Sbjct: 165 AHDDKPG---LYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGT 221 Query: 145 GEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 A D A V + + + Sbjct: 222 AWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFV 281 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLY 240 E+ Y EV P ++ TG + D MF T + P + ++ Sbjct: 282 RSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIF 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + + + LPLR R+E A G++R F + + EE E Sbjct: 342 NQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVN 398 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + ++ VV L T + E+W Sbjct: 399 ACIRMVYDMYSTFGFEKIVVKLSTR----PDKRIGSDEMW 434 >gi|161614260|ref|YP_001588225.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194446059|ref|YP_002040590.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|198243456|ref|YP_002215793.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207857160|ref|YP_002243811.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|189083620|sp|A9N243|SYT_SALPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690315|sp|B5FJA8|SYT_SALDC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690400|sp|B5QVW8|SYT_SALEP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238693615|sp|B4T4M8|SYT_SALNS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161363624|gb|ABX67392.1| hypothetical protein SPAB_02005 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404722|gb|ACF64944.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197937972|gb|ACH75305.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|206708963|emb|CAR33293.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + + ET + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RMVYDMYSTFGFEKIVVKLSTR----PDKRIGSDEMW 434 >gi|161503559|ref|YP_001570671.1| threonyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864906|gb|ABX21529.1| hypothetical protein SARI_01637 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 622 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 89/340 (26%), Gaps = 41/340 (12%) Query: 32 SLDEKNRILIKKIEDIRARRNSNS-AQIGQAIAEGNLSLVDALKNE------TSTLKEQL 84 +D + + +E + R + + + + + + L E + Sbjct: 85 DVDLDRTLTQEDVEALEKRMHELAEKDYDVIKKKVSWHDARETFVKRGETYKVAILDENI 144 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 +K ++ + + + + + S + + + Sbjct: 145 AHDDKPG---LYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGT 201 Query: 145 GEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 A D A V + + + Sbjct: 202 AWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFV 261 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLY 240 E+ Y EV P ++ TG + D MF T + P + ++ Sbjct: 262 RSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIF 321 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + + + LPLR R+E A G++R F + + EE E Sbjct: 322 NQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVN 378 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + ++ VV L T + E+W Sbjct: 379 ACIRMVYDMYSTFGFEKIVVKLSTR----PDKRIGSDEMW 414 >gi|16764684|ref|NP_460299.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991842|ref|ZP_02572941.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168244449|ref|ZP_02669381.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448321|ref|YP_002045340.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197262906|ref|ZP_03162980.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|22654123|sp|Q8ZPS9|SYT_SALTY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690646|sp|B4TGH1|SYT_SALHS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|16419852|gb|AAL20258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194406625|gb|ACF66844.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197241161|gb|EDY23781.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329759|gb|EDZ16523.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205336802|gb|EDZ23566.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261246542|emb|CBG24352.1| ThrRS [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993213|gb|ACY88098.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157870|emb|CBW17364.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912318|dbj|BAJ36292.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223961|gb|EFX49024.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129604|gb|ADX17034.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988221|gb|AEF07204.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + + ET + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RMVYDMYSTFGFEKIVVKLSTR----PDKRIGSDEMW 434 >gi|34580760|ref|ZP_00142240.1| threonyl-tRNA synthetase [Rickettsia sibirica 246] gi|28262145|gb|EAA25649.1| threonyl-tRNA synthetase [Rickettsia sibirica 246] Length = 635 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 63/202 (31%), Gaps = 10/202 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A+ V + I ++GYTEV P+LV +G Sbjct: 248 RELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASG 307 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 KF DDMF + ++ ++ I + LPLR + R+EA Sbjct: 308 HWEKFRDDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R + + E E E+ K V Sbjct: 368 ALH---GLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDR-- 422 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 + EVW +N +E Sbjct: 423 --PEIRAGSNEVWDKAENALKE 442 >gi|292488129|ref|YP_003531006.1| threonyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|292899340|ref|YP_003538709.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291199188|emb|CBJ46302.1| threonyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291553553|emb|CBA20598.1| Threonyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|312172261|emb|CBX80518.1| Threonyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYEYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|15892219|ref|NP_359933.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|22654126|sp|Q92IX4|SYT_RICCN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|15619354|gb|AAL02834.1| threonyl-tRNA synthetase [Rickettsia conorii str. Malish 7] Length = 635 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 63/202 (31%), Gaps = 10/202 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A+ V + I ++GYTEV P+LV +G Sbjct: 248 RELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASG 307 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 KF DDMF + ++ ++ I + LPLR + R+EA Sbjct: 308 HWEKFRDDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R + + E E E+ K V Sbjct: 368 ALH---GLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDR-- 422 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 + EVW +N +E Sbjct: 423 --PEIRAGSNEVWDKAENALKE 442 >gi|238791701|ref|ZP_04635338.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909] gi|238728805|gb|EEQ20322.1| Threonyl-tRNA synthetase [Yersinia intermedia ATCC 29909] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|290475547|ref|YP_003468435.1| threonine tRNA synthetase [Xenorhabdus bovienii SS-2004] gi|289174868|emb|CBJ81669.1| threonine tRNA synthetase [Xenorhabdus bovienii SS-2004] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 83/312 (26%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D + + IE + R + I + +A K Q+ + Sbjct: 105 DVDLDRSLTQEDIELLEKRMLELAKTDYDVIKKKVSWQEAREAFAARGEEYKIQILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++++ ++ + + + + + + S + + + A Sbjct: 165 SRDDYPGLYHHEEYMDMCRGPHVPNMRFCHHFKLQKIAGAYWRGNSDNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A + + + Sbjct: 225 DKKQLNAYLQRLEEASKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFARVK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + + MF T + P + +++ Sbjct: 285 LKEYHYQEVKGPFMMDRILWEKTGHWENYKEHMFTTSSENREYCVKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E+ E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEDQIHQEVSNCI 401 Query: 304 SCAEEILKRLDL 315 ++ Sbjct: 402 KMIYDVYNTFGF 413 >gi|254804601|ref|YP_003082822.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14] gi|254668143|emb|CBA04768.1| Threonyl-tRNA synthetase [Neisseria meningitidis alpha14] Length = 637 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 310 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ +E I K+ H Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 413 >gi|224584156|ref|YP_002637954.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254783535|sp|C0Q647|SYT_SALPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|224468683|gb|ACN46513.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + + ET + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RMVYDMYSPFGFEKIVVKLSTR----PDKRIGSDEMW 434 >gi|188533977|ref|YP_001907774.1| threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] gi|238689736|sp|B2VEM1|SYT_ERWT9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188029019|emb|CAO96887.1| Threonyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYEYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|238787089|ref|ZP_04630889.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] gi|238724877|gb|EEQ16517.1| Threonyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|225076640|ref|ZP_03719839.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens NRL30031/H210] gi|224952046|gb|EEG33255.1| hypothetical protein NEIFLAOT_01690 [Neisseria flavescens NRL30031/H210] Length = 643 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 256 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNVAGYKEVKTPQIMDKTFWEKSGHW 315 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 316 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 375 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ E I K+ H Sbjct: 376 H---GLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFH 419 >gi|224476774|ref|YP_002634380.1| threonyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|254783537|sp|B9DNC9|SYT_STACT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|222421381|emb|CAL28195.1| threonyl-tRNA synthetase 1 [Staphylococcus carnosus subsp. carnosus TM300] Length = 647 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 116/345 (33%), Gaps = 25/345 (7%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL---SLVDAL-KNETS 78 ++ S+ +++ + ++ E+ + R S + + + + L+DA+ ++E+ Sbjct: 112 VKISSDDFPEIEKTMKQIVN--ENYKIERKVVSREEAKEFFKDDPYKLELIDAIPEDESV 169 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 TL Q + V I + +N +L R G Sbjct: 170 TLYSQGEFTDL-CRGVHVPSTSKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDL 228 Query: 139 REHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 + H ++ E D + K L GA + + A + R + ++++D + Sbjct: 229 KAHLKMLEERKERDHRKIGKELDLFMNSQLVGAGLPLWLPNGATIRREIERYIVDKEVAL 288 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH-----EI 244 GY V P++ E +G + DDMF + + + Sbjct: 289 -GYDHVYTPVMANVELYKTSGHWDHYQDDMFPPMKLDETEEMVLRPMNCPHHMMIYKNKP 347 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LP+R L R EA A G+ R + R + E +R++ Sbjct: 348 HSYRELPIRIAELGTMHRYEASGA---VSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVE 404 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 ++ + L D D E+W +++ +E Sbjct: 405 LILDVYEDFGFENYSFRLSYRDPEDKEKYFDDDEMWERAESMLKE 449 >gi|238753686|ref|ZP_04615048.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] gi|238708238|gb|EEQ00594.1| Threonyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 61/196 (31%), Gaps = 10/196 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ VV L T Sbjct: 371 H---GLMRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKLSTR---- 423 Query: 330 SACKTYDLEVWLAGQN 345 + E+W ++ Sbjct: 424 PEKRIGSDELWTRAED 439 >gi|193216931|ref|YP_002000173.1| threonyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] gi|193002254|gb|ACF07469.1| threonyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] Length = 579 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 96/306 (31%), Gaps = 25/306 (8%) Query: 66 NLSLVDALKNETSTL--------KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + LK + + K + + K I + L Sbjct: 86 KKEMFEELKKDKKEITFYAYIHPKTKENLFVDLCVGNHVESTKEIKHFKLLSLAGAYWRG 145 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK---------LSGARFSVLT 168 + +L R G + E+ + E D + K LSG F + Sbjct: 146 DSKNKMLTRIYGTCWESQKELEEYLALVEERKERDHRKIGKDLNIFAVSQLSGQGFPIWL 205 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL 228 + A+ +++ + G+ EV P + +G + +DMF Sbjct: 206 EDGMKIHNAIRDYVL-KLDRKFGFKEVLTPHFGEKKLYEISGHWDHYQEDMFTPIKMDNE 264 Query: 229 IPTSEVSLTN----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + LY+ + LP+R++ + +R E A G+ R Sbjct: 265 TLVARPMTCPHHIVLYNMTRRSYRDLPIRYSEQSRLYRYEKSGALS---GLERVRSMDLT 321 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E R++ E + + + ++ L D+ VSL D S D ++W + Sbjct: 322 EGHVFVRKDQIKAEFKHLYNMIQKALSDFDIQVDHVSLSLRDPNNSVKFFNDDKMWNQAE 381 Query: 345 NLYREI 350 +E+ Sbjct: 382 ADLKEV 387 >gi|229586468|ref|YP_002844969.1| threonyl-tRNA synthetase [Rickettsia africae ESF-5] gi|259516664|sp|C3PMR6|SYT_RICAE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|228021518|gb|ACP53226.1| Threonyl-tRNA synthetase [Rickettsia africae ESF-5] Length = 635 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 63/202 (31%), Gaps = 10/202 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A+ V + I ++GYTEV P+LV +G Sbjct: 248 RELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASG 307 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 KF DDMF + ++ ++ I + LPLR + R+EA Sbjct: 308 HWEKFRDDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R + + E E E+ K V Sbjct: 368 ALH---GLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDR-- 422 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 + EVW +N +E Sbjct: 423 --PEIRAGSNEVWDKAENALKE 442 >gi|157828174|ref|YP_001494416.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|166225494|sp|A8GR83|SYT_RICRS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157800655|gb|ABV75908.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] Length = 635 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 63/202 (31%), Gaps = 10/202 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A+ V + I ++GYTEV P+LV +G Sbjct: 248 RELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASG 307 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 KF DDMF + ++ ++ I + LPLR + R+EA Sbjct: 308 HWEKFRDDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R + + E E E+ K V Sbjct: 368 ALH---GLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDR-- 422 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 + EVW +N +E Sbjct: 423 --PEIRAGSNEVWDKAENALKE 442 >gi|269213639|ref|ZP_05982445.2| threonine--tRNA ligase [Neisseria cinerea ATCC 14685] gi|269145722|gb|EEZ72140.1| threonine--tRNA ligase [Neisseria cinerea ATCC 14685] Length = 643 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 256 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 315 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 316 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 375 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ E I K+ H Sbjct: 376 H---GLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFH 419 >gi|62179922|ref|YP_216339.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168263848|ref|ZP_02685821.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463268|ref|ZP_02697199.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|73919823|sp|Q57PV3|SYT_SALCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|62127555|gb|AAX65258.1| threonine tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|195634423|gb|EDX52775.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205347615|gb|EDZ34246.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|322714388|gb|EFZ05959.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + + ET + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RMVYDMYSTFGFEKIVVKLSTR----PDKRIGSDEMW 434 >gi|311693962|gb|ADP96835.1| threonyl-tRNA synthetase [marine bacterium HP15] Length = 641 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 51/162 (31%), Gaps = 6/162 (3%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + EHGY E+ P +V +G KF Sbjct: 254 HMQEEAPGMVFWHPDGWSLYQEIEQYMRRKQQEHGYKEIKTPQVVSRNLWEKSGHWDKFK 313 Query: 217 DDMFCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 DDMF T + I +++ + K LPLR R+EA A Sbjct: 314 DDMFTTESEKHDYAIKPMNCPCHVQVFNQGLKSYKDLPLRLAEFGSCHRNEASGALH--- 370 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + EI Sbjct: 371 GLMRVRGFTQDDAHIFCEEDAIQQEVSSFIEMLHEIYTDFGF 412 >gi|310767522|gb|ADP12472.1| threonyl-tRNA synthetase [Erwinia sp. Ejp617] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 84/312 (26%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + IE + R + + I + ++ A + E + + Sbjct: 105 DVDLDRTLTQEDIEQLEKRMHQLAETNYDVIKKNVSWQEARDAFAARGENYKMTILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + + S+ + + + A Sbjct: 165 SHDDRPGLYHHQEYVDMCRGPHVPNMRFCHHFKLQKISGAYWRGDSSNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKQLAAYLLRIEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + + MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKEAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCI 401 Query: 304 SCAEEILKRLDL 315 + Sbjct: 402 KMVYDTYSTFGF 413 >gi|288576250|ref|ZP_05978464.2| threonine--tRNA ligase [Neisseria mucosa ATCC 25996] gi|288565905|gb|EFC87465.1| threonine--tRNA ligase [Neisseria mucosa ATCC 25996] Length = 643 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 256 LDLFHLQDEAPGMVFWHPKGWALWQTIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 315 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 316 DNYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 375 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ +E I K+ H Sbjct: 376 H---GLMRVRGFVQDDAHIFCTEDQIVSEARAFNELLVRIYKQFGFH 419 >gi|304397616|ref|ZP_07379493.1| threonyl-tRNA synthetase [Pantoea sp. aB] gi|304354788|gb|EFM19158.1| threonyl-tRNA synthetase [Pantoea sp. aB] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYSTFGF 413 >gi|294084802|ref|YP_003551562.1| threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664377|gb|ADE39478.1| Threonyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 641 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 57/209 (27%), Gaps = 7/209 (3%) Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + R+ + + +H+ E + D A SV Sbjct: 209 DSDRPMLQRIYGTAWRTEKELNAYLHMLEEAEKRDHRKLGKQLDMFHLQEEAAGSVFWHQ 268 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 + + + GY EV P LV +G KF ++MF Sbjct: 269 KGWFIYREIESYVRRRLEQAGYGEVKTPQLVDRTLWEESGHWDKFRENMFTAQSEDERTL 328 Query: 231 TSEVSLTNLYSHEII----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 + + + LPLR R+E A G++R F + + Sbjct: 329 ALKPMNCPCHVQIFRQGIKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRAFTQDDA 385 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDL 315 E+ E + + + I Sbjct: 386 HIFCTEDQITEESVQFCALLQSIYADFGF 414 >gi|326623540|gb|EGE29885.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 622 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + + ET + + Sbjct: 85 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RMVYDMYSTFGFEKIVVKLSTR----PDKRIGSDEMW 414 >gi|308186646|ref|YP_003930777.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1] gi|308057156|gb|ADO09328.1| Threonyl-tRNA synthetase [Pantoea vagans C9-1] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYSTFGF 413 >gi|260777881|ref|ZP_05886774.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260605894|gb|EEX32179.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 642 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 101/343 (29%), Gaps = 35/343 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D ++ + + ++ I R + Q I + DA + T K ++ + Sbjct: 106 DIDLEHSLTQEDLDKIEKRMKELAKTKYQVIKKKVSWQEARDAFEARGETYKIEILDENV 165 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEV--------------PIGTSANENILIRSVGKKPS 133 +++ ++ I + + +++ +L R G Sbjct: 166 SRDDRPGLYHHEEYIDMCRGPHVPHMGFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFH 225 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------LH 186 + H E D + K + D Sbjct: 226 DKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRAK 285 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+GY EV PL++ +G K+AD MF T + P + +++ Sbjct: 286 LDEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQG 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E E + Sbjct: 346 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTSCI 402 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + VV L T + E+W + Sbjct: 403 KMVYDTYQTFGFDNIVVKLSTR----PEKRVGSDEIWDQSEEA 441 >gi|251777990|ref|ZP_04820910.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082305|gb|EES48195.1| threonine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 643 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 101/339 (29%), Gaps = 33/339 (9%) Query: 42 KKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + +E + A + ++ +K+E ++ + E E + Sbjct: 115 QDLEKLEAEMKKIIKENPSIEKFELPRDEALELMKDEPYKVELINDLGEDEIISFYKIGE 174 Query: 100 KLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI-------------HLSREHFEIGE 146 C + PI E+ E E Sbjct: 175 FTDLCAGPHVMTLKPIKAIKLIRSAGAYWKGDEKNKMLTRIYGTAFLKKSELDEYLEAVE 234 Query: 147 ALGLMD---FDRATKLSGARFSVLTGHLAHLER-----ALGQFMIDLHTSEHGYTEVSAP 198 D R KL +V G + + Q I+ GY P Sbjct: 235 EAKKRDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQTLQRWIEDEEERRGYVLTKTP 294 Query: 199 LLVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTN-LYSHEIIESKSLPL 252 L+ + + +G + D MF + + + +Y+ E + LP+ Sbjct: 295 LMAKSDLYKISGHWDHYKDGMFVLGDEEKDEEVFALRPMTCPFQYTIYNAEQHSYRDLPI 354 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 R+ + FR+E+ + G++R QF + I E E + +L + I+K Sbjct: 355 RYGETSTLFRNESSG---EMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVLELIKYIMKT 411 Query: 313 LDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 L + + + D + D + W Q+ R I Sbjct: 412 LGIDEDISYRFSKWDPNNTEKYINDPDAWNKTQDTMRTI 450 >gi|239947855|ref|ZP_04699608.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] gi|241116864|ref|XP_002401645.1| threonyl-tRNA synthetase, putative [Ixodes scapularis] gi|215493189|gb|EEC02830.1| threonyl-tRNA synthetase, putative [Ixodes scapularis] gi|239922131|gb|EER22155.1| threonyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] Length = 635 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 73/242 (30%), Gaps = 10/242 (4%) Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + + + + + E + + D A+ V Sbjct: 208 DSCNEMLQRIYGTAWATKEQLDNYLFMLEEAEKRDHRKLGRELDLFHFQEEAQGMVFWHD 267 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 + + I ++GY EV P+LV +G KF DDMF + Sbjct: 268 KGWSIYNIIEQYIRKKIRKNGYIEVKTPVLVDKSLWEASGHWKKFRDDMFALETDDKTLA 327 Query: 231 TSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 ++ ++ I + LPLR + R+EA A G++R + + Sbjct: 328 LKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALH---GLMRVRSLVQDDAH 384 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 EE E E+ K + V + EVW +N Sbjct: 385 IFCAEEQITDETVSFCKLLTEVYKDFGFNDIKVKFSDR----PEIRAGSDEVWDKAENAL 440 Query: 348 RE 349 +E Sbjct: 441 KE 442 >gi|119945879|ref|YP_943559.1| threonyl-tRNA synthetase [Psychromonas ingrahamii 37] gi|166225485|sp|A1SWU5|SYT_PSYIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119864483|gb|ABM03960.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychromonas ingrahamii 37] Length = 635 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 90/320 (28%), Gaps = 38/320 (11%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG-NLSLVDAL-KNETSTL 80 + + ++ DE +I R N + E ++ AL K + Sbjct: 104 YDIDLDVTINDDELAKIA--------KRMNELVKTNYTVVKEKVSVEEAKALFKERGESY 155 Query: 81 K-EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 K E L + ++ ++ I + + + + + S + + Sbjct: 156 KLEILEGIHPDDRPGLYHHEEYIDMCRGPHVPVMKFCQYFKLMKVSGAYWRGNSDNKMLQ 215 Query: 140 EHFEIGEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERAL 178 + A D A V Sbjct: 216 RIYGTAWADKKQLNAYLKRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHSNGWTIYRE 275 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVS 235 + + T + Y EV AP ++ +G K+ D+MFCT + P + Sbjct: 276 LEKYVREQTEAYDYQEVKAPQILDRALWEKSGHWGKYKDNMFCTSSENRDYAIKPMNCPG 335 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +++ + + LPLR R+E + G++R F + + EE Sbjct: 336 HLQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRAFTQDDAHIFCTEEQI 392 Query: 296 FTEHERMLSCAEEILKRLDL 315 E + E K Sbjct: 393 LDEVSACIQMVFECYKTFGF 412 >gi|304415438|ref|ZP_07396087.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] gi|304282702|gb|EFL91216.1| threonyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] Length = 652 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 88/311 (28%), Gaps = 33/311 (10%) Query: 61 AIAEGNLSLVDALKNETSTLKEQL--PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 DA K + + +++H ++ I + + Sbjct: 136 KKKVSWQEARDAFLARGEDYKTLILDENISRDDHPALYHHQEYIDMCRGPHVPNMRFCHH 195 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGL---------------------MDFDRAT 157 + + + S + + + + D Sbjct: 196 FKLQKISGAYWRGDSNNKMLQRIYGTAWSDKKQLNAYLQKIEEAAKRDHRKIGKQLDLYH 255 Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 A V H + + E+ Y EV PL++ TG +A+ Sbjct: 256 MQEEAPGMVFWHHNGWTIFRELESFVRAKLQEYQYQEVKGPLMMDRLLWAKTGHWENYAE 315 Query: 218 DMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 +MF T + P + +++ + + LPLR R+E+ A G Sbjct: 316 NMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNESSGALH---G 372 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 ++R F + + E+ E ++ ++ + V L T + Sbjct: 373 LMRVRAFTQDDAHIFCTEQQVRAEVNNCIAMIYDMYRVFGFEKIEVKLSTR----PEKRI 428 Query: 335 YDLEVWLAGQN 345 E+W A +N Sbjct: 429 GSDEIWTAAEN 439 >gi|302381720|ref|YP_003817543.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302192348|gb|ADK99919.1| threonyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 639 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 84/288 (29%), Gaps = 48/288 (16%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 + R V + + + + GY EV P ++ + +G Sbjct: 251 MELFHMQEEGRGMVFWHPKGWILWQVIEAYMRRRLDAAGYVEVKTPQVLDRKFWEASGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSEAGSA 268 K+ +MF + + + + LPLR R E A Sbjct: 311 EKYRPNMFVCETVEGETLSLKPMNCPGHVQIFGIGQRSYRELPLRMAEFGACHRYEPSGA 370 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 G++R F + + RE+ E R + + L + ++L T Sbjct: 371 LH---GLMRVRGFTQDDAHIFCREDQIVEETRRFIELTRIVHADLGMQTAYINLATR--- 424 Query: 329 FSACKTYDLEVWLAGQNLYREISSCS------------------------------TCGN 358 + E W + + E + + TCG Sbjct: 425 -PDVRAGSDEFWDKAEGMLGEAARLAGVDPVIAEGDGAFYAPKLDFVVKDAIGREWTCGT 483 Query: 359 FQ-----SRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENY 400 Q R+N+ Y + + + L+ + + R + ++ENY Sbjct: 484 LQLDYVLPERLNAEYVGEDGQKHRPV-MLHRAILGSFERFIGIMIENY 530 >gi|301629969|ref|XP_002944104.1| PREDICTED: threonyl-tRNA synthetase-like [Xenopus (Silurana) tropicalis] Length = 841 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A +V + + + ++GY EV P ++ TG K+ ++MF Sbjct: 258 HAPGTVFWHPKGWMLWQEVEQYMRRVYRDNGYQEVKGPQILDKTLWEKTGHWDKYRENMF 317 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T L P + ++ I + LPLRF R+E G++R Sbjct: 318 ITESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRFGEFGNCHRNEPTGGLH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E+ +E + + + + + L T + Sbjct: 375 VRGFTQDDGHIFCTEDMIQSEVATFTTLLQRVYRDFGFTEILYRLSTR----PEKRIGSE 430 Query: 338 EVWLAGQNLYREISSCSTCG 357 E W ++ E S C Sbjct: 431 ESWDRAESALAEGLRASGCT 450 >gi|307730402|ref|YP_003907626.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003] gi|307584937|gb|ADN58335.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1003] Length = 635 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 66/202 (32%), Gaps = 14/202 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + ++H + + LPLR+ R+E+ Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + EE +E + A + K + L L Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQFISESIAFNTLAMSVYKDFGFDNVEIKLS---L 421 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 A D E W + RE Sbjct: 422 RPDARAGTD-ETWDRAEQGLRE 442 >gi|238021043|ref|ZP_04601469.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147] gi|237868023|gb|EEP69029.1| hypothetical protein GCWU000324_00940 [Kingella oralis ATCC 51147] Length = 637 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 253 LDLFHLQDEAPGMVFWHPRGWTLWQVIEQHMRRELTAAGYQEVKTPQIMDKTFWEKSGHW 312 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ +++H + LP+R R+E A Sbjct: 313 ANYKDNMFLTSSEKRDYAVKPMNCPGHVQIFNHGLRSYNDLPMRLAEFGSCHRNEPSGAL 372 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ E +I ++ H Sbjct: 373 H---GLMRVRGFVQDDAHIFCTEDQIAEETRAFNQLVMKIYRQFGFH 416 >gi|237731269|ref|ZP_04561750.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2] gi|226906808|gb|EEH92726.1| threonyl-tRNA synthetase [Citrobacter sp. 30_2] Length = 642 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + ++ + R + + + I + ++ + ET + + Sbjct: 105 DIDLDRTLTQEDVDALEKRMHELAEKNYDVIKKKVSWYEARETFVKRGETYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RMVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|86137404|ref|ZP_01055981.1| threonyl-tRNA synthetase [Roseobacter sp. MED193] gi|85825739|gb|EAQ45937.1| threonyl-tRNA synthetase [Roseobacter sp. MED193] Length = 648 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 94/326 (28%), Gaps = 24/326 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K + +I K + +R + A V+ ++ Sbjct: 110 DRAEPFTPEDLGVIEKKMKEIINKRDPVRTEVWDRQRAVDFYTANDEPYKVELIEAIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTG 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + +H+ E + + + A V Q + Sbjct: 230 KEKLKAHLHMLEEAAKRDHRKLGREMNLYHMQEEAPGQVFWHPNGWKIYTTLQDYMRRMQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ ++MF R + + + Sbjct: 290 ERDGYVEVNTPQVVDRKLWEASGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + LPLR R E A G++R F + + E+ +E Sbjct: 350 VFNQGLKSYRDLPLRMAEFGSCARYEPSGALH---GIMRVRGFTQDDGHIFCAEDQIESE 406 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCT 324 + ++ ++ L H + L T Sbjct: 407 TAKFIAFLSKVYADLGFHNWTIKLST 432 >gi|205352944|ref|YP_002226745.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690498|sp|B5RAX3|SYT_SALG2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|205272725|emb|CAR37641.1| Threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628018|gb|EGE34361.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 642 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + + ET + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHDARETFVKRGETYKVAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMGRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RMVYDMYSTFGFEKIVVKLSTR----PDKRIGSDEMW 434 >gi|165932872|ref|YP_001649661.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] gi|165907959|gb|ABY72255.1| threonyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] Length = 644 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 63/202 (31%), Gaps = 10/202 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A+ V + I ++GYTEV P+LV +G Sbjct: 257 RELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASG 316 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 KF DDMF + ++ ++ I + LPLR + R+EA Sbjct: 317 HWEKFRDDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASG 376 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R + + E E E+ K V Sbjct: 377 ALH---GLMRVRSLVQDDAHIFCAAEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDR-- 431 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 + EVW +N +E Sbjct: 432 --PEIRAGSNEVWDKAENALKE 451 >gi|56696171|ref|YP_166527.1| threonyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] gi|73919826|sp|Q5LTX8|SYT_SILPO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56677908|gb|AAV94574.1| threonyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] Length = 648 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 89/317 (28%), Gaps = 24/317 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K + +I K E + + I A V+ ++ T Sbjct: 110 DRAEPFTPEDLGLIEKKMKEIINKREPVTTEVWERTRAIEFYKANNEPYKVELIEAIPGT 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + Sbjct: 170 EPIRMYWHGHWQDLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSNRPMLQRIYGVAFTG 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + +H+ E + + D A + Q + Sbjct: 230 KEKLKAHLHMLEEAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTTLQDYMRRQQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ ++MF R + + + Sbjct: 290 RRGGYVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I + LPLR R E A G++R F + + E+ +E Sbjct: 350 IFNQGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDGHIFCAEDQIESE 406 Query: 299 HERMLSCAEEILKRLDL 315 + I K L Sbjct: 407 TAEFIDFLSMIYKDLGF 423 >gi|157158126|ref|YP_001463015.1| threonyl-tRNA synthetase [Escherichia coli E24377A] gi|157161181|ref|YP_001458499.1| threonyl-tRNA synthetase [Escherichia coli HS] gi|170019932|ref|YP_001724886.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|193068904|ref|ZP_03049863.1| threonyl-tRNA synthetase [Escherichia coli E110019] gi|209919078|ref|YP_002293162.1| threonyl-tRNA synthetase [Escherichia coli SE11] gi|218695280|ref|YP_002402947.1| threonyl-tRNA synthetase [Escherichia coli 55989] gi|256018088|ref|ZP_05431953.1| threonyl-tRNA synthetase [Shigella sp. D9] gi|332279130|ref|ZP_08391543.1| threonyl-tRNA synthetase [Shigella sp. D9] gi|166987321|sp|A7ZMI6|SYT_ECO24 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166987322|sp|A8A0R2|SYT_ECOHS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083607|sp|B1IPK9|SYT_ECOLC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238065113|sp|B6IBD7|SYT_ECOSE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783522|sp|B7L6J2|SYT_ECO55 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157066861|gb|ABV06116.1| threonyl-tRNA synthetase [Escherichia coli HS] gi|157080156|gb|ABV19864.1| threonyl-tRNA synthetase [Escherichia coli E24377A] gi|169754860|gb|ACA77559.1| threonyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|192957699|gb|EDV88143.1| threonyl-tRNA synthetase [Escherichia coli E110019] gi|209912337|dbj|BAG77411.1| threonyl-tRNA synthase [Escherichia coli SE11] gi|218352012|emb|CAU97745.1| threonyl-tRNA synthetase [Escherichia coli 55989] gi|320197902|gb|EFW72510.1| Threonyl-tRNA synthetase [Escherichia coli EC4100B] gi|323948091|gb|EGB44082.1| threonyl-tRNA synthetase [Escherichia coli H120] gi|324016472|gb|EGB85691.1| threonyl-tRNA synthetase [Escherichia coli MS 117-3] gi|332101482|gb|EGJ04828.1| threonyl-tRNA synthetase [Shigella sp. D9] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|300924761|ref|ZP_07140703.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1] gi|300419049|gb|EFK02360.1| threonyl-tRNA synthetase [Escherichia coli MS 182-1] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|227111545|ref|ZP_03825201.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + IE + R + + I + ++ A + ET + + Sbjct: 105 DVDIDRTLTQEDIELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKMAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 +++ ++ I + + + + S + + + A Sbjct: 165 SRDDRPGLYHHEEYIDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + + Sbjct: 225 DKKQLASYLQRLEEASKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 + Y EV P ++ TG + + MF T + P + +++ Sbjct: 285 LKSYQYQEVKGPFMMDRVMWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 KMVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|310658431|ref|YP_003936152.1| threonyl-tRNA synthetase [Clostridium sticklandii DSM 519] gi|308825209|emb|CBH21247.1| threonyl-tRNA synthetase [Clostridium sticklandii] Length = 637 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 102/317 (32%), Gaps = 32/317 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLKEQLPILEK 89 +D ++R+ + +E I A + + +D +K K +L + Sbjct: 105 DIDLEHRLSPEDLEKIEAEMKKIVKEEFEVERYELPKDEAIDFMKKLGEDYKVELIEGLE 164 Query: 90 EEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSA 134 E + + + + P + +L R G Sbjct: 165 EGSTISFYKQGEFTDLCAGPHLPNVKKVKAFKLLSVAGAYWRADQSNKMLQRVYGIAFEK 224 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 ++ ++ E L D + K F L+ L ++ ++H Sbjct: 225 KKDLDDYIQMMEEAKLRDHRKLGKELELFTLLDEGPGFPFFLPKGTVLKNKLLEYWREVH 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 E GY E+ P+++ + +G + ++M+ + + P + +Y + Sbjct: 285 -REDGYVEIETPIILNRQLWETSGHWFNYKENMYTVEIDEEDFAIKPMNCPGGMLVYQTK 343 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + K P+R + R E A G++R F + + E E + ++ Sbjct: 344 MRSYKDFPIRMGEIGRVHRHELSGALH---GLMRVRAFTQDDAHIFMLPEQIKDEIKGVV 400 Query: 304 SCAEEILKRLDLHYRVV 320 S ++I K Y + Sbjct: 401 SLIDKIYKTFGFSYHLE 417 >gi|307310711|ref|ZP_07590357.1| threonyl-tRNA synthetase [Escherichia coli W] gi|331647210|ref|ZP_08348304.1| threonine--tRNA ligase [Escherichia coli M605] gi|331673269|ref|ZP_08374037.1| threonine--tRNA ligase [Escherichia coli TA280] gi|281178789|dbj|BAI55119.1| threonyl-tRNA synthetase [Escherichia coli SE15] gi|306908889|gb|EFN39385.1| threonyl-tRNA synthetase [Escherichia coli W] gi|315061024|gb|ADT75351.1| threonyl-tRNA synthetase [Escherichia coli W] gi|315299748|gb|EFU58988.1| threonyl-tRNA synthetase [Escherichia coli MS 16-3] gi|323378405|gb|ADX50673.1| threonyl-tRNA synthetase [Escherichia coli KO11] gi|330911523|gb|EGH40033.1| threonyl-tRNA synthetase [Escherichia coli AA86] gi|331043993|gb|EGI16129.1| threonine--tRNA ligase [Escherichia coli M605] gi|331069467|gb|EGI40854.1| threonine--tRNA ligase [Escherichia coli TA280] gi|332343438|gb|AEE56772.1| threonyl-tRNA synthetase ThrS [Escherichia coli UMNK88] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|193065767|ref|ZP_03046830.1| threonyl-tRNA synthetase [Escherichia coli E22] gi|194428543|ref|ZP_03061082.1| threonyl-tRNA synthetase [Escherichia coli B171] gi|218554286|ref|YP_002387199.1| threonyl-tRNA synthetase [Escherichia coli IAI1] gi|260844071|ref|YP_003221849.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|260855585|ref|YP_003229476.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|260868246|ref|YP_003234648.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|293446093|ref|ZP_06662515.1| threonyl-tRNA synthetase [Escherichia coli B088] gi|331668404|ref|ZP_08369252.1| threonine--tRNA ligase [Escherichia coli TA271] gi|331677592|ref|ZP_08378267.1| threonine--tRNA ligase [Escherichia coli H591] gi|226701402|sp|B7M1C7|SYT_ECO8A RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|192926539|gb|EDV81170.1| threonyl-tRNA synthetase [Escherichia coli E22] gi|194413421|gb|EDX29704.1| threonyl-tRNA synthetase [Escherichia coli B171] gi|195182909|dbj|BAG66479.1| threonyl-tRNA synthetase [Escherichia coli O111:H-] gi|218361054|emb|CAQ98632.2| threonyl-tRNA synthetase [Escherichia coli IAI1] gi|257754234|dbj|BAI25736.1| threonyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|257759218|dbj|BAI30715.1| threonyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|257764602|dbj|BAI36097.1| threonyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|291322923|gb|EFE62351.1| threonyl-tRNA synthetase [Escherichia coli B088] gi|323153043|gb|EFZ39312.1| threonyl-tRNA synthetase [Escherichia coli EPECa14] gi|331063598|gb|EGI35509.1| threonine--tRNA ligase [Escherichia coli TA271] gi|331074052|gb|EGI45372.1| threonine--tRNA ligase [Escherichia coli H591] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|146282712|ref|YP_001172865.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501] gi|166225484|sp|A4VM22|SYT_PSEU5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145570917|gb|ABP80023.1| threonyl-tRNA synthetase [Pseudomonas stutzeri A1501] Length = 640 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 62/200 (31%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + E+GY EV P +V +G Sbjct: 250 LDLFHTQEEAPGMVFWHPAGWTLYQNLEQYMRQVQRENGYQEVRTPQVVDRILWEKSGHW 309 Query: 213 PKFADDMFCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T + + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTSSENRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ + L T Sbjct: 370 H---GIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLKVYADFGFSDIAMKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNLYRE 349 A + E+W + E Sbjct: 423 PAKRVGSDELWDRAEGALAE 442 >gi|89053589|ref|YP_509040.1| threonyl-tRNA synthetase [Jannaschia sp. CCS1] gi|88863138|gb|ABD54015.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Jannaschia sp. CCS1] Length = 648 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 58/217 (26%), Gaps = 12/217 (5%) Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 + + ++ ++ E + + D A V Sbjct: 210 WLGDNTRPMLQRIYGVAFKNRDDLRKYLNFLEEAEKRDHRRLGREMDLYHMQEEAPGQVF 269 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---- 223 Q + GY EV+ P +V +G K+ + MF Sbjct: 270 WHPNGWTIYTTLQDYMRRKQRADGYVEVNTPQVVDRALWEKSGHWDKYQEHMFIVEVDEE 329 Query: 224 DGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + + + E+ + LPLR R E A G++R Sbjct: 330 HAQTKAINALKPMNCPCHVEVFNQGLKSYRDLPLRMAEFGSCSRYEPSGALH---GIMRV 386 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E + ++ + K L Sbjct: 387 RGFTQDDAHIFCTEDQIEAECAKFITFLSGVYKDLGF 423 >gi|323143349|ref|ZP_08078037.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066] gi|322416867|gb|EFY07513.1| threonine--tRNA ligase [Succinatimonas hippei YIT 12066] Length = 644 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + ++ Y EV P ++ +G Sbjct: 251 LDLFHFQQEAPGMVFWHNDGWTIYRVIENFMREMLHKYHYIEVKTPQIMDRVLWERSGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+A++MF T + P + +++ + LP+R R+E + Sbjct: 311 DKYAENMFTTSSENRDYAIKPMNCPGAIQIFNSRTRSYRDLPIRMAEFGNCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G+LR F + + E+ TE + + Sbjct: 371 H---GLLRVRAFEQDDAHIFCTEDQIMTEVSDCIRMVYDTYSNFGF 413 >gi|304439592|ref|ZP_07399496.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371904|gb|EFM25506.1| threonine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 647 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 7/169 (4%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G F H L+ L + ++ E+GY E+ P+++ + + +G + D+M+ Sbjct: 269 GPGFPFFLPHGMILKNTLLNWWRNVLL-ENGYGEIQTPIILNEALWHRSGHWDHYKDNMY 327 Query: 221 CTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + P + +Y + + LP+R + R E A G+ R Sbjct: 328 FTKIDGEDYAVKPMNCPGSILVYEEKAHSYRDLPIRLSEFGQVHRHELSGALH---GLFR 384 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 F + + E E +M+ AE + Y + D Sbjct: 385 VRTFTQDDAHVYCLPEQVKDEVFKMIDLAELLYSTFGFKYEIELSTRPD 433 >gi|114767278|ref|ZP_01446118.1| threonyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601] gi|114540584|gb|EAU43657.1| threonyl-tRNA synthetase [Roseovarius sp. HTCC2601] Length = 649 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 57/199 (28%), Gaps = 16/199 (8%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A + Q + GY EV+ P +V + +G Sbjct: 253 REMDLFHLQPEAPGQIFWHPNGWTIYTSLQDYMRRQQHRDGYVEVNTPQVVDRKLWEASG 312 Query: 211 QIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSF 261 + ++MF R + + +I + LPLR Sbjct: 313 HWDNYQENMFIVEVDEEHAREKSINALKPMNCPCHVQIFNSGLKSYRDLPLRMAEFGSCN 372 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVS 321 R E A G++R F + + ++ E ++ + I L H + Sbjct: 373 RYEPSGALH---GIMRVRGFTQDDAHIFCTDDQIEAETKKFIEFLAGIYADLGFHNWTIK 429 Query: 322 LCTGDLGFSACKTYDLEVW 340 L T + E W Sbjct: 430 LSTR----PEKRIGSEESW 444 >gi|82777067|ref|YP_403416.1| threonyl-tRNA synthetase [Shigella dysenteriae Sd197] gi|123755748|sp|Q32FI0|SYT_SHIDS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81241215|gb|ABB61925.1| threonine tRNA synthetase [Shigella dysenteriae Sd197] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|16129675|ref|NP_416234.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|24112885|ref|NP_707395.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 301] gi|26247970|ref|NP_754010.1| threonyl-tRNA synthetase [Escherichia coli CFT073] gi|30063014|ref|NP_837185.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|74311961|ref|YP_310380.1| threonyl-tRNA synthetase [Shigella sonnei Ss046] gi|89108559|ref|AP_002339.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110] gi|91210933|ref|YP_540919.1| threonyl-tRNA synthetase [Escherichia coli UTI89] gi|110641840|ref|YP_669570.1| threonyl-tRNA synthetase [Escherichia coli 536] gi|110805471|ref|YP_688991.1| threonyl-tRNA synthetase [Shigella flexneri 5 str. 8401] gi|117623893|ref|YP_852806.1| threonyl-tRNA synthetase [Escherichia coli APEC O1] gi|170081377|ref|YP_001730697.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|170680212|ref|YP_001743530.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|188492265|ref|ZP_02999535.1| threonyl-tRNA synthetase [Escherichia coli 53638] gi|191171752|ref|ZP_03033299.1| threonyl-tRNA synthetase [Escherichia coli F11] gi|194435142|ref|ZP_03067376.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012] gi|194438580|ref|ZP_03070669.1| threonyl-tRNA synthetase [Escherichia coli 101-1] gi|215486938|ref|YP_002329369.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|218558588|ref|YP_002391501.1| threonyl-tRNA synthetase [Escherichia coli S88] gi|218689663|ref|YP_002397875.1| threonyl-tRNA synthetase [Escherichia coli ED1a] gi|218699714|ref|YP_002407343.1| threonyl-tRNA synthetase [Escherichia coli IAI39] gi|218705218|ref|YP_002412737.1| threonyl-tRNA synthetase [Escherichia coli UMN026] gi|237705668|ref|ZP_04536149.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|238900934|ref|YP_002926730.1| threonyl-tRNA synthetase [Escherichia coli BW2952] gi|253773326|ref|YP_003036157.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161779|ref|YP_003044887.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606] gi|256022617|ref|ZP_05436482.1| threonyl-tRNA synthetase [Escherichia sp. 4_1_40B] gi|293405218|ref|ZP_06649210.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412] gi|293410035|ref|ZP_06653611.1| threonyl-tRNA synthetase [Escherichia coli B354] gi|293415037|ref|ZP_06657680.1| threonyl-tRNA synthetase [Escherichia coli B185] gi|297517244|ref|ZP_06935630.1| threonyl-tRNA synthetase [Escherichia coli OP50] gi|298380861|ref|ZP_06990460.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300938947|ref|ZP_07153648.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1] gi|300987614|ref|ZP_07178286.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1] gi|300994418|ref|ZP_07180923.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1] gi|301017728|ref|ZP_07182383.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1] gi|301025270|ref|ZP_07188835.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1] gi|306815028|ref|ZP_07449184.1| threonyl-tRNA synthetase [Escherichia coli NC101] gi|307138378|ref|ZP_07497734.1| threonyl-tRNA synthetase [Escherichia coli H736] gi|312966921|ref|ZP_07781139.1| threonyl-tRNA synthetase [Escherichia coli 2362-75] gi|331642316|ref|ZP_08343451.1| threonine--tRNA ligase [Escherichia coli H736] gi|331653119|ref|ZP_08354124.1| threonine--tRNA ligase [Escherichia coli M718] gi|67473036|sp|P0A8M3|SYT_ECOLI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|67473037|sp|P0A8M4|SYT_ECOL6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|67473038|sp|P0A8M5|SYT_SHIFL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122957455|sp|Q0T4S9|SYT_SHIF8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123084457|sp|Q1RB76|SYT_ECOUT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123343967|sp|Q0THB0|SYT_ECOL5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123732358|sp|Q3Z267|SYT_SHISS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223339|sp|A1ABQ2|SYT_ECOK1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701400|sp|B7MAS9|SYT_ECO45 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701401|sp|B7NT58|SYT_ECO7I RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701403|sp|B7N556|SYT_ECOLU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701404|sp|B1LE12|SYT_ECOSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229557979|sp|B1XGI1|SYT_ECODH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783521|sp|B7USA2|SYT_ECO27 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783523|sp|B7MVJ7|SYT_ECO81 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516437|sp|C4ZYI1|SYT_ECOBW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|5107656|pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna gi|26108373|gb|AAN80575.1|AE016761_150 Threonyl-tRNA synthetase [Escherichia coli CFT073] gi|1742811|dbj|BAA15498.1| threonyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110] gi|1788013|gb|AAC74789.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|24051829|gb|AAN43102.1| threonine tRNA synthetase [Shigella flexneri 2a str. 301] gi|30041263|gb|AAP16992.1| threonine tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|73855438|gb|AAZ88145.1| threonine tRNA synthetase [Shigella sonnei Ss046] gi|91072507|gb|ABE07388.1| threonyl-tRNA synthetase [Escherichia coli UTI89] gi|110343432|gb|ABG69669.1| threonyl-tRNA synthetase [Escherichia coli 536] gi|110615019|gb|ABF03686.1| threonine tRNA synthetase [Shigella flexneri 5 str. 8401] gi|115513017|gb|ABJ01092.1| threonine tRNA synthetase [Escherichia coli APEC O1] gi|169889212|gb|ACB02919.1| threonyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|170517930|gb|ACB16108.1| threonyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|188487464|gb|EDU62567.1| threonyl-tRNA synthetase [Escherichia coli 53638] gi|190908082|gb|EDV67674.1| threonyl-tRNA synthetase [Escherichia coli F11] gi|194416606|gb|EDX32741.1| threonyl-tRNA synthetase [Shigella dysenteriae 1012] gi|194422590|gb|EDX38588.1| threonyl-tRNA synthetase [Escherichia coli 101-1] gi|215265010|emb|CAS09396.1| threonyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|218365357|emb|CAR03078.1| threonyl-tRNA synthetase [Escherichia coli S88] gi|218369700|emb|CAR17469.1| threonyl-tRNA synthetase [Escherichia coli IAI39] gi|218427227|emb|CAR08113.2| threonyl-tRNA synthetase [Escherichia coli ED1a] gi|218432315|emb|CAR13205.1| threonyl-tRNA synthetase [Escherichia coli UMN026] gi|222033474|emb|CAP76215.1| Threonyl-tRNA synthetase [Escherichia coli LF82] gi|226900425|gb|EEH86684.1| threonyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|238863657|gb|ACR65655.1| threonyl-tRNA synthetase [Escherichia coli BW2952] gi|242377442|emb|CAQ32194.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253324370|gb|ACT28972.1| threonyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973680|gb|ACT39351.1| threonyl-tRNA synthetase [Escherichia coli B str. REL606] gi|253977874|gb|ACT43544.1| threonyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|260449158|gb|ACX39580.1| threonyl-tRNA synthetase [Escherichia coli DH1] gi|281600917|gb|ADA73901.1| Threonyl-tRNA synthetase [Shigella flexneri 2002017] gi|284921639|emb|CBG34711.1| threonyl-tRNA synthetase [Escherichia coli 042] gi|291427426|gb|EFF00453.1| threonyl-tRNA synthetase [Escherichia coli FVEC1412] gi|291432685|gb|EFF05664.1| threonyl-tRNA synthetase [Escherichia coli B185] gi|291470503|gb|EFF12987.1| threonyl-tRNA synthetase [Escherichia coli B354] gi|294493274|gb|ADE92030.1| threonyl-tRNA synthetase [Escherichia coli IHE3034] gi|298278303|gb|EFI19817.1| threonyl-tRNA synthetase [Escherichia coli FVEC1302] gi|299880135|gb|EFI88346.1| threonyl-tRNA synthetase [Escherichia coli MS 196-1] gi|300306094|gb|EFJ60614.1| threonyl-tRNA synthetase [Escherichia coli MS 200-1] gi|300400020|gb|EFJ83558.1| threonyl-tRNA synthetase [Escherichia coli MS 69-1] gi|300406264|gb|EFJ89802.1| threonyl-tRNA synthetase [Escherichia coli MS 45-1] gi|300456146|gb|EFK19639.1| threonyl-tRNA synthetase [Escherichia coli MS 21-1] gi|305851676|gb|EFM52129.1| threonyl-tRNA synthetase [Escherichia coli NC101] gi|307553740|gb|ADN46515.1| threonine tRNA synthetase [Escherichia coli ABU 83972] gi|307626794|gb|ADN71098.1| threonyl-tRNA synthetase [Escherichia coli UM146] gi|309701942|emb|CBJ01255.1| threonyl-tRNA synthetase [Escherichia coli ETEC H10407] gi|312288385|gb|EFR16287.1| threonyl-tRNA synthetase [Escherichia coli 2362-75] gi|315136359|dbj|BAJ43518.1| threonyl-tRNA synthetase [Escherichia coli DH1] gi|315286432|gb|EFU45867.1| threonyl-tRNA synthetase [Escherichia coli MS 110-3] gi|315290480|gb|EFU49854.1| threonyl-tRNA synthetase [Escherichia coli MS 153-1] gi|320181253|gb|EFW56172.1| Threonyl-tRNA synthetase [Shigella boydii ATCC 9905] gi|320194570|gb|EFW69201.1| Threonyl-tRNA synthetase [Escherichia coli WV_060327] gi|323937321|gb|EGB33600.1| threonyl-tRNA synthetase [Escherichia coli E1520] gi|323940615|gb|EGB36806.1| threonyl-tRNA synthetase [Escherichia coli E482] gi|323952226|gb|EGB48099.1| threonyl-tRNA synthetase [Escherichia coli H252] gi|323956620|gb|EGB52358.1| threonyl-tRNA synthetase [Escherichia coli H263] gi|323962102|gb|EGB57698.1| threonyl-tRNA synthetase [Escherichia coli H489] gi|323973902|gb|EGB69074.1| threonyl-tRNA synthetase [Escherichia coli TA007] gi|323978098|gb|EGB73184.1| threonyl-tRNA synthetase [Escherichia coli TW10509] gi|324011501|gb|EGB80720.1| threonyl-tRNA synthetase [Escherichia coli MS 60-1] gi|331039114|gb|EGI11334.1| threonine--tRNA ligase [Escherichia coli H736] gi|331049217|gb|EGI21289.1| threonine--tRNA ligase [Escherichia coli M718] gi|332758628|gb|EGJ88947.1| threonyl-tRNA synthetase [Shigella flexneri 2747-71] gi|333003769|gb|EGK23305.1| threonyl-tRNA synthetase [Shigella flexneri VA-6] gi|333004377|gb|EGK23908.1| threonyl-tRNA synthetase [Shigella flexneri K-218] gi|333006570|gb|EGK26070.1| threonyl-tRNA synthetase [Shigella flexneri K-272] gi|333018789|gb|EGK38082.1| threonyl-tRNA synthetase [Shigella flexneri K-227] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|331007295|ref|ZP_08330496.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989] gi|330418902|gb|EGG93367.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC1989] Length = 640 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 91/321 (28%), Gaps = 39/321 (12%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 + +++L+ DE + K++ ++ + ++G DA K K Sbjct: 104 YDIDLDHMLT-DEDMDKIEKRMRELIKTQYDVVKKVG-----SWQDAYDAFKARGEEYKL 157 Query: 83 QLPILE--KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 ++ + K+ ++ + + + + + + S + + Sbjct: 158 EILERDIPKDATPALYHHEEYVDMCRGPHVPNMKFCEHFKLMRISGAYWRGDSDNKMLQR 217 Query: 141 --------------HFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALG 179 H E D FD A V A Sbjct: 218 IYGTAWPDKKKLKAHLHFLEEAVKRDHRKLGKKFDYFHMQEEAPGMVFWHPKGWSIYATI 277 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL 239 + + ++GY E+ P +V +G KF D+MF + + Sbjct: 278 EEYMRKVQRDNGYKEIKTPQVVDRSLWERSGHWDKFRDNMFTVESES--RDYAIKPMNCP 335 Query: 240 YSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ K LPLR R+EA +G++R F + + EE Sbjct: 336 CHVQVFNQGLKSYKELPLRLAEFGSCHRNEASG---TLQGLMRVRGFVQDDAHIFCSEEA 392 Query: 295 SFTEHERMLSCAEEILKRLDL 315 E ++ Sbjct: 393 IQEEVSVFTDLLYKVYADFGF 413 >gi|253688275|ref|YP_003017465.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259516611|sp|C6DFY6|SYT_PECCP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|251754853|gb|ACT12929.1| threonyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + IE + R + + I + ++ A + ET + + Sbjct: 105 DVDIDRTLTQEDIELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKMAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 +++ ++ I + + + + S + + + A Sbjct: 165 SRDDRPGLYHHEEYIDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + + Sbjct: 225 DKKQLASYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 + Y EV P ++ TG + + MF T + P + +++ Sbjct: 285 LKSYQYQEVKGPFMMDRVMWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 KMVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|324119204|gb|EGC13092.1| threonyl-tRNA synthetase [Escherichia coli E1167] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|323968488|gb|EGB63894.1| threonyl-tRNA synthetase [Escherichia coli M863] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|315651290|ref|ZP_07904318.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986] gi|315486442|gb|EFU76796.1| threonine--tRNA ligase [Eubacterium saburreum DSM 3986] Length = 651 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 119/352 (33%), Gaps = 30/352 (8%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS--LVDALKNETST 79 H + + L+ + + +IK+ E I R + E V+ +++ Sbjct: 107 HEPFSRDDLDKLEAEMKKIIKEGEAI--ERFELPREEAIKFMEEKNEPYKVELIRDLPQD 164 Query: 80 LKEQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E++ ++ + K I V +N+ L R G + Sbjct: 165 --EKISFYKQGDFTDLCAGPHLQRTKDIKAFKLVSSSMAYWRGDSNKARLQRIYGTAYNT 222 Query: 135 IHLSREHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDL 185 + + E + L D ++ + + G ++ + + L +++ DL Sbjct: 223 KEELEAYLKHLEDIKLRDHNKLGREMELFTTVDVVGQGLPLMLPKGTKMIQKLQRWIEDL 282 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW-LIPTSEVSLTNL----- 239 +E GY PL+ + + +G + D MF D + + +T Sbjct: 283 EDNEWGYVRTKTPLMAKSDLYKISGHWDHYQDGMFILGDPQHDGEILALRPMTCPFQYYV 342 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y + + LP R + FR+E + G+ R QF E ++ R + + E Sbjct: 343 YKNTQKSYRDLPYRMGETSTLFRNEDSG---EMHGLTRVRQFTISEGHNVIRPDQAEEEL 399 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 + L+ A +L+ L L V + D D W Q R I Sbjct: 400 QNCLNLAIYVLETLGLRDDVTFRLSKWDKNNKEKYLGDEAYWEGTQAALRNI 451 >gi|296117435|ref|ZP_06836023.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295976037|gb|EFG82827.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 60/194 (30%), Gaps = 12/194 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A + ++ Q + + +GY EV P LV +G K+ MF Sbjct: 259 EAVGQIFWHPKGWRLYSVLQDYMRRAQTRNGYQEVRTPQLVDRGLWEASGHWDKYRQHMF 318 Query: 221 CTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ H + + LPLR R E A G+ Sbjct: 319 IATVEDEDKTLALKPMNCPCHVQIFRHGLRSYRELPLRMAEFGACHRYEPSGALH---GI 375 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 +R F + + EE E R + + + L + V + Sbjct: 376 MRVRGFTQDDAHIFCTEEQIADETARFVRMLSAVYQDLGFEHFRVKFADR----PEQRAG 431 Query: 336 DLEVWLAGQNLYRE 349 + W +N +E Sbjct: 432 SDDTWDRSENALKE 445 >gi|284799642|ref|ZP_05984463.2| threonine--tRNA ligase [Neisseria subflava NJ9703] gi|284797591|gb|EFC52938.1| threonine--tRNA ligase [Neisseria subflava NJ9703] Length = 643 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 256 LDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHW 315 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ ++++ + + LP+R R+E A Sbjct: 316 ENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGAL 375 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + E+ E I K+ H Sbjct: 376 H---GLMRVRGFVQDDAHIFCAEDQIVDEARAFNELLVRIYKQFGFH 419 >gi|291085451|ref|ZP_06353132.2| threonine--tRNA ligase [Citrobacter youngae ATCC 29220] gi|291071041|gb|EFE09150.1| threonine--tRNA ligase [Citrobacter youngae ATCC 29220] Length = 622 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + ++ + R + + + I + ++ + ET + + Sbjct: 85 DIDLDRTLTQEDVDALEKRMHELAEKNYDVIKKKVSWYEARETFVKRGETYKVSILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIRDEVNACI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RMVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 414 >gi|218134037|ref|ZP_03462841.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC 43243] gi|217991412|gb|EEC57418.1| hypothetical protein BACPEC_01927 [Bacteroides pectinophilus ATCC 43243] Length = 585 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 104/342 (30%), Gaps = 29/342 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E I +++++ + + + + +I + A + + + L++ Sbjct: 58 EDIAAIEKEMKKI------AKTGKKIIRKEISKEEALEMFKDDEYKIDLINNLEDGNITC 111 Query: 88 EKEEHEVCSSLKKL------ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 ++ + +N +L R G H Sbjct: 112 YEQGDFTDLCRGPHVDNVKLCRNFKLIRHSGAYWKGDSNNKVLQRIYGVCFPTPEELEAH 171 Query: 142 FEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 ++ E D + K L G + + + L ++ D + GY Sbjct: 172 LQLLEEAKERDHRKIGKDMGLFMVDDLIGRGLPMFLPKGYVIWQELENYIKDKE-RKLGY 230 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSLTNLYSHEIIESK 248 V P + +G + ++MF D L P + +Y++ + K Sbjct: 231 LHVMTPCIGTVNLYKTSGHWDHYKENMFPAMDVDGESFVLRPMNCPHHMMIYANRMHSYK 290 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LP+R +A FR E+ +G+ R F + + E E +R++ Sbjct: 291 DLPIRIGEIAHDFRYESSG---TLKGIERGRHFCQNDAHIFVTPEQIEDEFKRVVDLIFS 347 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 K + L D D E+W ++ R + Sbjct: 348 TYKDFGITDYRCVLSLRDPADKVKYHDDDEMWNKAEDALRTV 389 >gi|330861018|emb|CBX71290.1| threonyl-tRNA synthetase [Yersinia enterocolitica W22703] Length = 457 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|331663198|ref|ZP_08364108.1| threonine--tRNA ligase [Escherichia coli TA143] gi|331683225|ref|ZP_08383826.1| threonine--tRNA ligase [Escherichia coli H299] gi|331058997|gb|EGI30974.1| threonine--tRNA ligase [Escherichia coli TA143] gi|331079440|gb|EGI50637.1| threonine--tRNA ligase [Escherichia coli H299] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|323493467|ref|ZP_08098589.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] gi|323312290|gb|EGA65432.1| threonyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 102/343 (29%), Gaps = 35/343 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D ++ + + +E I R + Q I + DA + T K ++ + Sbjct: 106 DIDLEHSLTQEDLEKIEKRMKELAKTKYQVIKKKVSWQEARDAFEARGETYKMEILDENV 165 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEV--------------PIGTSANENILIRSVGKKPS 133 +++ ++ I + + +++ +L R G Sbjct: 166 ARDDRPGLYHHEEYIDMCRGPHVPHMGFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFH 225 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------LH 186 + H E D + K + D Sbjct: 226 DKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVREK 285 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +E+GY EV PL++ +G K+A+ MF T L P + +++ Sbjct: 286 LTEYGYQEVKGPLIMDRVLWERSGHWDKYAEAMFTTSSENRDYALKPMNCPGHVQIFNQG 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E E + Sbjct: 346 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQDEVTSCI 402 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + VV L T + E+W + Sbjct: 403 KMVYDTYQTFGFDNIVVKLSTR----PEKRVGSDEIWDQSEEA 441 >gi|15802131|ref|NP_288153.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 EDL933] gi|15831680|ref|NP_310453.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|168762217|ref|ZP_02787224.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|168788115|ref|ZP_02813122.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|168800100|ref|ZP_02825107.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|187776029|ref|ZP_02799987.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188024843|ref|ZP_02774486.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|189010441|ref|ZP_02807141.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189402338|ref|ZP_02781727.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|189403439|ref|ZP_02795487.2| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|208810744|ref|ZP_03252620.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208816647|ref|ZP_03257767.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|209400429|ref|YP_002270789.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|217328990|ref|ZP_03445071.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|254793336|ref|YP_003078173.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|291282899|ref|YP_003499717.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|22654116|sp|Q8XE27|SYT_ECO57 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238065112|sp|B5YQ07|SYT_ECO5E RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|12515733|gb|AAG56706.1|AE005395_2 threonine tRNA synthetase [Escherichia coli O157:H7 str. EDL933] gi|13361893|dbj|BAB35849.1| threonine tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|187769425|gb|EDU33269.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188016225|gb|EDU54347.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|189000290|gb|EDU69276.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189356196|gb|EDU74615.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|189360618|gb|EDU79037.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|189367509|gb|EDU85925.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|189372060|gb|EDU90476.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|189377572|gb|EDU95988.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|208725260|gb|EDZ74967.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208730990|gb|EDZ79679.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|209161829|gb|ACI39262.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|209768828|gb|ACI82726.1| threonine tRNA synthetase [Escherichia coli] gi|209768830|gb|ACI82727.1| threonine tRNA synthetase [Escherichia coli] gi|209768832|gb|ACI82728.1| threonine tRNA synthetase [Escherichia coli] gi|209768834|gb|ACI82729.1| threonine tRNA synthetase [Escherichia coli] gi|209768836|gb|ACI82730.1| threonine tRNA synthetase [Escherichia coli] gi|217318337|gb|EEC26764.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|254592736|gb|ACT72097.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|290762772|gb|ADD56733.1| Threonyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|320188406|gb|EFW63068.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212] gi|320652208|gb|EFX20506.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687] gi|320657809|gb|EFX25571.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658384|gb|EFX26078.1| threonyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|326342086|gb|EGD65867.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044] gi|326343638|gb|EGD67400.1| Threonyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|15597940|ref|NP_251434.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|116050734|ref|YP_790445.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|218891076|ref|YP_002439942.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|254241197|ref|ZP_04934519.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|313107813|ref|ZP_07793987.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016] gi|22654141|sp|Q9I099|SYT_PSEAE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|122259859|sp|Q02NP1|SYT_PSEAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226701406|sp|B7V188|SYT_PSEA8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|9948822|gb|AAG06132.1|AE004702_9 threonyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|115585955|gb|ABJ11970.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|126194575|gb|EAZ58638.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|218771301|emb|CAW27066.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|310880489|gb|EFQ39083.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa 39016] Length = 640 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + +HGY EV P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRILWERSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T+ + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTSSESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ + + L T Sbjct: 370 H---GIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 A + E+W + Sbjct: 423 PAKRVGSDELWDRAEGA 439 >gi|326795752|ref|YP_004313572.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1] gi|326546516|gb|ADZ91736.1| threonyl-tRNA synthetase [Marinomonas mediterranea MMB-1] Length = 638 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 38/329 (11%), Positives = 86/329 (26%), Gaps = 42/329 (12%) Query: 53 SNSAQIGQAIAE-----GNLSLVDALKNETSTLKEQLP------ILEKEEHEVCSSLKKL 101 + +I + I + ++ +D + + E + E ++ Sbjct: 119 AIEKRIAELIKKDYDVVKTMTPIDEARRQFDERGESYKVQLIDDMDESVTEVGLYRHEEY 178 Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL----------- 150 + + + L + + S + + + + Sbjct: 179 MDMCRGPHVPNTRVLRYFKLMKLAGAYWRGDSNNEMLQRVYGTAWSDKKELKAYLLRIEE 238 Query: 151 ----------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 D A V + + ++ Y EV P + Sbjct: 239 AEKRDHRKLGKKLDLFHVQEEAPGMVFWHPKGWRLYQAVEQYMRQKQLDNNYQEVKTPQI 298 Query: 201 VRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTL 257 V +G K+ ++MF T + + + +Y+ + + LP R Sbjct: 299 VDRVLWEKSGHWGKYQENMFTTHSENRDYAVKPMNCPCHIQVYNQGLKSYRDLPFRMAEF 358 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 R+E A G++R F + + E +E + E+ Sbjct: 359 GSCHRNEPSGALH---GIMRVRNFVQDDGHIFVTENQIQSEVSEFIKLLHEVYADFGFDN 415 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + L T + EVW + Sbjct: 416 IIYRLSTR----PEQRVGSDEVWDKAEKA 440 >gi|257455909|ref|ZP_05621126.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] gi|257446655|gb|EEV21681.1| threonyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] Length = 642 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 50/168 (29%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHPNGWTMWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGS 267 + D MF T + + + ++ + LPLR R+E Sbjct: 310 ENYGDMMFTTHSEK--RDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + G++R F + + E E + + ++ K Sbjct: 368 SLH---GIMRVRGFTQDDAHIFCSNEQIKQEAQDFIKLTLDVYKDFGF 412 >gi|182419388|ref|ZP_02950640.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237666667|ref|ZP_04526652.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376719|gb|EDT74291.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237657866|gb|EEP55421.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 643 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 99/338 (29%), Gaps = 33/338 (9%) Query: 43 KIEDIRARRNSNSAQ-IGQAIAEGNLSLVDALKN----ETSTLKE----------QLPIL 87 +E + A + E L + + + ++ Sbjct: 116 DLEKLEAEMKKIIKENPSIEKFELPRDEALELMKDEPYKVELINDLPEDEIISFYKIGDF 175 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K I I + +L R G E E E Sbjct: 176 TDLCAGPHVMSLKNIKAIKLTRSAGAYWKGNEKNKMLTRIYGTAFLKKAELDEFLEALEE 235 Query: 148 LGLMD---FDRATKLSGARFSVLTGHLAHLER-----ALGQFMIDLHTSEHGYTEVSAPL 199 D R KL V G + + Q ++ + GY PL Sbjct: 236 AKKRDHNKLGRELKLFTTDEKVGQGLPLLMPKGAKIVQTLQRWVEDEEEKRGYVLTKTPL 295 Query: 200 LVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTN-LYSHEIIESKSLPLR 253 + + + +G + D MF D + + +Y+ E + LP+R Sbjct: 296 MAKSDLYKVSGHWDHYKDGMFVLGDEEKDDEVFALRPMTCPFQYTIYNAEQHSYRDLPIR 355 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 + + FR+EA + G++R QF + I E E + ++ + +++ L Sbjct: 356 YAETSTLFRNEASG---EMHGLIRVRQFTLADGHLIVTPEQLEEEFKGVVELIQYLMETL 412 Query: 314 DLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 + ++ + D + D + W Q+ R I Sbjct: 413 GIAEKITYRFSKWDPNNTEKYINDPDAWNHTQDTMRNI 450 >gi|90407011|ref|ZP_01215201.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3] gi|90311882|gb|EAS39977.1| threonyl-tRNA synthetase [Psychromonas sp. CNPT3] Length = 635 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 111/368 (30%), Gaps = 54/368 (14%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG-NLSLVDALKNETST-- 79 + + ++ DE ++ I R N + + + +++ AL E Sbjct: 104 YDIDVDVAIN-DE-------ELAKIEKRMNLLVKTNYKVVKKNVSVAEAIALFKERDEPY 155 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 E L ++K++ ++ I + + + + + S + + Sbjct: 156 KLEILEGIDKDDRPGLYHHEEYIDMCRGPHVPMMKFSQYFKLMKVAGAYWRGNSDNKMLQ 215 Query: 140 EHFEIGEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERAL 178 + A D A V Sbjct: 216 RIYGTAWADKKQLKAYLKRLEEAAKRDHRKIGKQLDLYHMQDEAPGMVFWHANGWTIYRE 275 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVS 235 + I T E+GY EV AP ++ +G K+ D+MFCT + P + Sbjct: 276 LEKYIREQTEEYGYQEVKAPQILDRSLWEKSGHWAKYKDNMFCTCSENRDYAIKPMNCPG 335 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +++ + + LPLR + R+E + G++R F + + E Sbjct: 336 HVQIFNQGLKSYRDLPLRMSEFGSCHRNEPSGSLH---GLMRVRAFTQDDAHIFCTEAQI 392 Query: 296 FTEHERMLSCAEEILKRL---DLHYRVVSLCTGDLG------------FSACKTYDLE-V 339 E + E K ++ ++ + +G A D+E Sbjct: 393 LDEVSSCIKMVFECYKTFGFENIDVKLSTRPEQRVGDDATWDKAEAALADALTKNDVEFS 452 Query: 340 WLAGQNLY 347 WL G+ + Sbjct: 453 WLPGEGAF 460 >gi|296388793|ref|ZP_06878268.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PAb1] Length = 640 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + +HGY EV P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRILWERSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T+ + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTSSESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ + + L T Sbjct: 370 H---GIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 A + E+W + Sbjct: 423 PAKRVGSDELWDRAEGA 439 >gi|301327449|ref|ZP_07220684.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1] gi|309793489|ref|ZP_07687916.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7] gi|312969746|ref|ZP_07783929.1| threonyl-tRNA synthetase [Escherichia coli 1827-70] gi|300845961|gb|EFK73721.1| threonyl-tRNA synthetase [Escherichia coli MS 78-1] gi|308123076|gb|EFO60338.1| threonyl-tRNA synthetase [Escherichia coli MS 145-7] gi|310338031|gb|EFQ03120.1| threonyl-tRNA synthetase [Escherichia coli 1827-70] Length = 622 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 85 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 414 >gi|169831543|ref|YP_001717525.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169638387|gb|ACA59893.1| threonyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 635 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 10/175 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +G F L L +F + HT ++GY E+ P+++R E +G + ++M Sbjct: 257 AGPGFPFFHPRGMVLRNELERFWREEHT-KNGYLEIRTPIILRQELWERSGHWDHYRENM 315 Query: 220 FCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + T + + P + +Y ++ + LP+R L R E G++ Sbjct: 316 YFTTIDDEKYAVKPMNCPGGILVYRSKLHSYRELPIRLGELGLVHRHELSGVLH---GLM 372 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR---LDLHYRVVSLCTGDLG 328 R F + + R E E R++ E ++ D H + + LG Sbjct: 373 RARCFTQDDAHIFCRPEQVEEEIVRIMDLTEYFYRQVFGFDYHVELSTRPEKSLG 427 >gi|255654593|ref|ZP_05400002.1| threonyl-tRNA synthetase [Clostridium difficile QCD-23m63] Length = 639 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 105/350 (30%), Gaps = 45/350 (12%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG----NLSLVDALKNETSTLKEQLPIL 87 +D +R++ + +E I A + + E ++ +K + K +L Sbjct: 105 DIDLDHRLVPEDLEKIEAEMKKIAKE--DLKIERFELPRNEALELMKEQGEDYKVELISD 162 Query: 88 EKEEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKP 132 E + + + + P N +L R G Sbjct: 163 LPESEIISFYKQGDFTDLCRGPHLPSTKKVKAVKLQSVAGAYWRGDENNKMLQRIYGTSF 222 Query: 133 SAIHLSREHFEIGEALGLMD----------FDRATKLSGARFSVLTGHLAHLERALGQFM 182 E+ + E D F + G + G E Sbjct: 223 EKNKDLEEYLHLLEEAKKRDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWRE 282 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNL 239 I GY E+ +P+++ + +G + ++M+ + + P + Sbjct: 283 IHRKA---GYIEIESPIILNRKLWETSGHWYHYKENMYTVKIDDEDYAIKPMNCPGGLIY 339 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ ++ + P+R L R E A + G++R F + + E E Sbjct: 340 YNSQLHSYRDFPMRVAELGRVHRHELSGALQ---GLMRVRAFTQDDSHIFMLPEQIKDEI 396 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + + + I K Y + + + E W A +N RE Sbjct: 397 KGVANLIDGIYKTFGFEYNLELSTRPENSMGS-----NEEWEAAENGLRE 441 >gi|197118372|ref|YP_002138799.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|238690868|sp|B5EBX9|SYT_GEOBB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|197087732|gb|ACH39003.1| threonyl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 636 Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 99/320 (30%), Gaps = 28/320 (8%) Query: 23 LEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG-----NLSLVD 71 + + + ++EK R L K D++ R ++ A+ +G + L++ Sbjct: 106 YDFDVDHPFTPEDLEKIEEKMRELAKA--DLKIERKELTSADAIALFKGMGENYKVELIE 163 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK 131 L + +L Q ++ I + +L R G Sbjct: 164 DLGADKVSLYSQGDFVDL-CRGPHLPKTSFIKAFKLTSIAGAYWRGDEKRPMLQRVYGTA 222 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMI 183 + E D + + V+ + R + + Sbjct: 223 FGDKKELEAYLARIEEAKKRDHRKLGRELDLFSFNDEVGAGLVIWHPKGAMLRTILEDFE 282 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLY 240 + GY V P +++ E +G + ++M+ TT ++ +Y Sbjct: 283 RKEHLKRGYDIVLGPQILKTELWQRSGHYENYRENMYFTTVDEQSYGVKPMNCLAHMMIY 342 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++ + LPLR+ L R E G+LR F + + + E E + Sbjct: 343 RSQLRSYRDLPLRYFELGTVHRHERAGVLH---GLLRVRGFTQDDAHILCTPEQLDAEIK 399 Query: 301 RMLSCAEEILKRLDLHYRVV 320 ++ E++ + + Sbjct: 400 GVIQFVTEVMGIFGFEFEME 419 >gi|170717553|ref|YP_001784641.1| threonyl-tRNA synthetase [Haemophilus somnus 2336] gi|189083611|sp|B0UU42|SYT_HAES2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|168825682|gb|ACA31053.1| threonyl-tRNA synthetase [Haemophilus somnus 2336] Length = 642 Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 88/312 (28%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + I+ + R + I + ++ + E + + Sbjct: 105 DIDLDRSLTQEDIDTLEKRMLELAKTNYDVIKKRVSWQEARDTFESRAEPYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR-------- 139 K++ ++ I + + + + + S + + Sbjct: 165 AKDDQPALYHHEEYIDMCRGPHVPNMRFCHHFKLMKVAGAYWRGNSDNKMLQRIYGTAWA 224 Query: 140 ------EHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLH 186 ++ E D + K A V + + + Sbjct: 225 DKKQLADYLHRLEEAAKRDHRKIGKALNLYHMQEEAPGMVFWHNDGWTIFRELETFVRTK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG +AD MF T + P + +++ Sbjct: 285 LKEYDYQEVKGPFMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP+R R+E + G++R F + + E+ +E + Sbjct: 345 LKSYRDLPIRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEDQIESEVTSCI 401 Query: 304 SCAEEILKRLDL 315 +I Sbjct: 402 KMVYDIYSTFGF 413 >gi|157962084|ref|YP_001502118.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345] gi|189083623|sp|A8H4U6|SYT_SHEPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157847084|gb|ABV87583.1| threonyl-tRNA synthetase [Shewanella pealeana ATCC 700345] Length = 642 Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 98/337 (29%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSA---QIGQAIAEGNLSLVD-ALKNETSTLKEQLPIL 87 +D +++ + I+ + R + + + + + + E + + Sbjct: 105 DIDLDHKLTQEDIDALEKRMAELAKTNYAVDKRVVSWQEARDTFESRGEVYKMAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K+ ++ I + + + + + + S + + + A Sbjct: 165 PKDSTPALYHHEEYIDMCRGPHVPNMKFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALKVHLNRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHE 243 ++ Y EV PL++ +G K+++ MF T+ ++ +++ Sbjct: 285 LGQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTSSENREYAVKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQVQQEVSACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + + + VV L T + D E+W Sbjct: 402 KMVYDTYETFGFNSIVVKLSTR----PEKRIGDDEMW 434 >gi|152988735|ref|YP_001347870.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7] gi|166225481|sp|A6V485|SYT_PSEA7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|150963893|gb|ABR85918.1| threonyl-tRNA synthetase [Pseudomonas aeruginosa PA7] Length = 640 Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 62/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + +HGY EV P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRILWERSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTASESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ + + L T Sbjct: 370 H---GIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 A + E+W + Sbjct: 423 PAKRVGSDELWDRAEGA 439 >gi|300904575|ref|ZP_07122412.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300403488|gb|EFJ87026.1| threonyl-tRNA synthetase [Escherichia coli MS 84-1] gi|315257476|gb|EFU37444.1| threonyl-tRNA synthetase [Escherichia coli MS 85-1] Length = 622 Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 85 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 414 >gi|300818358|ref|ZP_07098568.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300821407|ref|ZP_07101554.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300525910|gb|EFK46979.1| threonyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300528998|gb|EFK50060.1| threonyl-tRNA synthetase [Escherichia coli MS 107-1] gi|323158484|gb|EFZ44500.1| threonyl-tRNA synthetase [Escherichia coli E128010] gi|323175213|gb|EFZ60827.1| threonyl-tRNA synthetase [Escherichia coli LT-68] gi|323180497|gb|EFZ66042.1| threonyl-tRNA synthetase [Escherichia coli 1180] gi|323186265|gb|EFZ71617.1| threonyl-tRNA synthetase [Escherichia coli 1357] Length = 622 Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 85 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 414 >gi|118595089|ref|ZP_01552436.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium HTCC2181] gi|118440867|gb|EAV47494.1| Threonyl-tRNA synthetase, class IIa [Methylophilales bacterium HTCC2181] Length = 635 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + ++GY E+ P ++ +G Sbjct: 250 LDLFHMQDNAPGMVFWHPKGWSLWLAVEDYMRQMFKDYGYKEIKTPTIIDKSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T + ++ ++++ + + LPLR R+E A Sbjct: 310 ENYQDNMFTTASENRVYAVKPMNCPGHVEVFNNTLHSYRDLPLRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + VV L T Sbjct: 370 H---GLMRVRGFTQDDAHIFCTEDQIKEEVMVFNDMLFKAYADFGFKDIVVMLSTR---- 422 Query: 330 SACKTYDLEVW 340 + EVW Sbjct: 423 PEKRVGSDEVW 433 >gi|295687966|ref|YP_003591659.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756] gi|295429869|gb|ADG09041.1| threonyl-tRNA synthetase [Caulobacter segnis ATCC 21756] Length = 658 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 54/443 (12%), Positives = 107/443 (24%), Gaps = 83/443 (18%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R + + ++++ + ++ + E S ++ + + Sbjct: 113 RDEPFSLDDLEKIEKRMKEIVDRDE-------KISREV---------WDREEAIKHFDDI 156 Query: 81 KEQLPILEKEEHE-----VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 EQ + L A + + + Sbjct: 157 GEQYKAQIIRDLPPTDTITVYRQGNWKDLCRGPHLPSTKHVGKAFKLTKLAGAYWRGDQN 216 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGA----------------------RFSVLTGHLAH 173 + + D D K + V Sbjct: 217 NAQLQRIYGTAWASEADLDAYLKRIEEAEKRDHRKLGKTMDLFHIQEEGKGMVFWHPKGW 276 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSE 233 + + + GY EV P ++ +G KF MF + + Sbjct: 277 ALYRVLEDYMRRRLDAAGYKEVKTPQILDKSLWEKSGHAEKFGHAMFMCESAEGEVLAVK 336 Query: 234 VSLTNLYSHEII----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 + + LPLR R E A G++R F + + Sbjct: 337 PMNCPGHIQIFNVGQKSYRELPLRMAEFGACHRYEPSGA---MHGIMRVRAFTQDDAHIF 393 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHY-RVVSLCTGDLGFSACKTYD------------ 336 REE E R + + L + DL + +D Sbjct: 394 CREEQVTEESARFIELLRSVYNDLGMTLADTKFSTRPDLRAGTDEVWDKAESALSAAAEA 453 Query: 337 ---LEVWLAGQNLY----RE------ISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKF 378 V G+ + E I CG Q R+++ Y + + Sbjct: 454 AGETLVLQPGEGAFYGPKLEFSLKDAIGRVWQCGTLQLDFVLPERLDAEYVSEDGSKKRP 513 Query: 379 THTLNGSGVAV-GRCLIAILENY 400 L+ + + R + +LEN+ Sbjct: 514 V-MLHRAILGSFERFIGILLENF 535 >gi|259418221|ref|ZP_05742139.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B] gi|259345616|gb|EEW57460.1| threonyl-tRNA synthetase [Silicibacter sp. TrichCH4B] Length = 648 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 54/177 (30%), Gaps = 12/177 (6%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V Q + + GY EV+ P +V + +G + Sbjct: 259 HMQEEAPGMVFWHPNGWRIYTTLQDYMRRMQDKGGYVEVNTPQVVNRKLWEASGHWDNYQ 318 Query: 217 DDMFCT----TDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGS 267 ++MF R + + ++ + LPLR R E Sbjct: 319 ENMFIVEVDEDHAREKAVNALKPMNCPCHIQVFNQGLKSYRDLPLRMAEFGSCNRYEPSG 378 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 A G++R F + + EE E + +S ++ + L V L T Sbjct: 379 A---MHGIMRVRGFTQDDGHIFCTEEQVEAETKEFVSFLAKVYQDLGFEKWRVKLST 432 >gi|327252835|gb|EGE64489.1| threonyl-tRNA synthetase [Escherichia coli STEC_7v] Length = 622 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 85 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 414 >gi|254453851|ref|ZP_05067288.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238] gi|198268257|gb|EDY92527.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 238] Length = 649 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 100/339 (29%), Gaps = 25/339 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R + + ++++K + +I K + +R I G V+ + Sbjct: 111 DRKKPFTPDDLATIEKKMKEIINKRDAVRTEVWDREVAIKYYEDRGEPYKVELINGIPGD 170 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + ++ Sbjct: 171 EPLRMYWHGDWQDLCRGPHLQNTGQVPGDSWKLMSIAGAYWRGDSDRAMLQRIYGVAFQN 230 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 + + +++ E + + D A + L Q + Sbjct: 231 KEQLRAHMNMLEEAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWLIYTQLQDYMRRKQ 290 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTN----- 238 GY EV+ P +V + +G K+ + MF R + + Sbjct: 291 RAGGYVEVNTPQVVDRKLWEQSGHWEKYQEHMFVVEVDEDHAREKSVNALKPMNCPCHVL 350 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y+ + + LP+R R E A G++R F + + E+ E Sbjct: 351 IYNQGLKSYRDLPMRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDAHIFCTEDQIEEE 407 Query: 299 HERMLSCAEEILKRLDL-HYRVVSLCTGDLGFSACKTYD 336 + + K L +++V D + + +D Sbjct: 408 TLTYIEFLTGVYKDLGFENFKVKFSDRPDTRAGSDEVWD 446 >gi|73662391|ref|YP_301172.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123761534|sp|Q49YB4|SYT_STAS1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72494906|dbj|BAE18227.1| threonyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 645 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 106/344 (30%), Gaps = 23/344 (6%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG---NLSLVDALKNETST 79 S+ +++ + E+ R S +A L+DA+ + + Sbjct: 112 ESISSDDFEKIEKTMK--QIANENYPIERKVVSRNEAKAFFSDDPYKQELIDAIPEDENV 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 V I + +N +L R G + Sbjct: 170 TLYTQGEFTDLCRGVHVPSTSKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLK 229 Query: 140 EHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 H ++ E D + K L GA + + A + R + ++++D S Sbjct: 230 AHLQMLEERKERDHRKIGKELELFSNNPLVGAGLPLWLPNGATIRREIERYIVDKEVSM- 288 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH-----EII 245 GY V P++ + +G + +DMF T + + + Sbjct: 289 GYDHVYTPVMANVDLYKTSGHWDHYQEDMFPTMKLDEYEEMVLRPMNCPHHMMIYANKPH 348 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LP+R L R EA A G+ R + R + E +R+++ Sbjct: 349 SYRELPIRIAELGTMHRYEASGA---VSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVNL 405 Query: 306 AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 ++ + L D D E+W+ +++ +E Sbjct: 406 IIDVYNDFNFENYSFRLSYRDPEDKEKYFDDDEMWIKAESMLKE 449 >gi|319408458|emb|CBI82113.1| Threonyl-tRNA synthetase [Bartonella schoenbuchensis R1] Length = 659 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 89/296 (30%), Gaps = 27/296 (9%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS----LVDALKNE 76 R + + +++K R +I++ + R S + + I + E Sbjct: 111 RKQPFTLDDLTIIEKKMREIIQRNKPFRKEI--WSREKAKKIFSEKNELYKVEIIDAIPE 168 Query: 77 TSTLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 +K Q + S ++ + + + AN +L R G + Sbjct: 169 DQDVKVYYQGDWFDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFAN 228 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHT 187 + + + E D R + + + + Sbjct: 229 ENDLKAYLHTLEEAEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRL 288 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD----GRWLIPTSEVSLTN----- 238 +H Y EV+AP ++ +G + ++MF TT + + Sbjct: 289 DDHKYDEVNAPQVLDKSLWEISGHWGWYKENMFQTTPAADDWDDQCIYALKPMNCPGHVQ 348 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ H + + LP+R R E + G++R F + + +E Sbjct: 349 IFKHGLKSYRDLPIRLAEFGIVHRYEPSGSLH---GLMRVRSFTQDDAHIFCTDEQ 401 >gi|309788453|ref|ZP_07683057.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617] gi|308923835|gb|EFP69338.1| threonyl-tRNA synthetase [Shigella dysenteriae 1617] Length = 622 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 85 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 414 >gi|227885859|ref|ZP_04003664.1| threonine--tRNA ligase [Escherichia coli 83972] gi|300898493|ref|ZP_07116830.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300917719|ref|ZP_07134368.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300930805|ref|ZP_07146177.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300951319|ref|ZP_07165163.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300958608|ref|ZP_07170733.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1] gi|301050944|ref|ZP_07197793.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1] gi|301647910|ref|ZP_07247687.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1] gi|227837432|gb|EEJ47898.1| threonine--tRNA ligase [Escherichia coli 83972] gi|300297398|gb|EFJ53783.1| threonyl-tRNA synthetase [Escherichia coli MS 185-1] gi|300314733|gb|EFJ64517.1| threonyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300357845|gb|EFJ73715.1| threonyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300415120|gb|EFJ98430.1| threonyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300449416|gb|EFK13036.1| threonyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300461363|gb|EFK24856.1| threonyl-tRNA synthetase [Escherichia coli MS 187-1] gi|301073967|gb|EFK88773.1| threonyl-tRNA synthetase [Escherichia coli MS 146-1] gi|312946320|gb|ADR27147.1| threonyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|313649261|gb|EFS13695.1| threonyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|315618916|gb|EFU99499.1| threonyl-tRNA synthetase [Escherichia coli 3431] gi|323169354|gb|EFZ55030.1| threonyl-tRNA synthetase [Shigella sonnei 53G] gi|323186901|gb|EFZ72219.1| threonyl-tRNA synthetase [Escherichia coli RN587/1] gi|324007092|gb|EGB76311.1| threonyl-tRNA synthetase [Escherichia coli MS 57-2] gi|332090644|gb|EGI95739.1| threonyl-tRNA synthetase [Shigella boydii 5216-82] gi|332093917|gb|EGI98970.1| threonyl-tRNA synthetase [Shigella dysenteriae 155-74] gi|332759227|gb|EGJ89536.1| threonyl-tRNA synthetase [Shigella flexneri K-671] gi|332762542|gb|EGJ92807.1| threonyl-tRNA synthetase [Shigella flexneri 4343-70] gi|332767218|gb|EGJ97413.1| threonyl-tRNA synthetase [Shigella flexneri 2930-71] gi|333018198|gb|EGK37500.1| threonyl-tRNA synthetase [Shigella flexneri K-304] Length = 622 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 85 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 414 >gi|50286281|ref|XP_445569.1| hypothetical protein [Candida glabrata CBS 138] gi|49524874|emb|CAG58480.1| unnamed protein product [Candida glabrata] Length = 462 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 9/160 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + + + L FM G+ EV PL+ R +G + +DM Sbjct: 54 ITPGSAFFLPNGTKIYNKLVSFMKTQQKHLFGFKEVITPLIYRKSLWEQSGHWENYKEDM 113 Query: 220 FC------TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 F T + L P + +++ LP+R++ +P R+EA A Sbjct: 114 FRVEGNDLTKEEYGLKPMNCPGHCVIFNRFDHSYNDLPIRYSDFSPLHRNEASGALS--- 170 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 G+ R F + + + E L + ++ Sbjct: 171 GLTRVRMFHQDDGHIFCTPDQVEVEILNCLKLVDMCYTKV 210 >gi|85711636|ref|ZP_01042693.1| threonyl-tRNA synthetase [Idiomarina baltica OS145] gi|85694496|gb|EAQ32437.1| threonyl-tRNA synthetase [Idiomarina baltica OS145] Length = 638 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 46/369 (12%), Positives = 104/369 (28%), Gaps = 55/369 (14%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTL 80 + ++ L+ D+ ++ + R + Q I + + Sbjct: 104 YDVDVDHTLTQDD--------LDKLEKRMKELAKTEYQVIKKKVSWQEARETFVERHEPY 155 Query: 81 KEQLPILEKEEHEV--CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 K ++ + ++ I + + + + + S + Sbjct: 156 KVEILDEDIPTDANPGLYHHEEYIDMCRGPHVPTMKFCQHFKVMKMAGAYWRGNSDNKML 215 Query: 139 REHFEIGEALGLM------DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS---- 188 + + A + A K + E A G + Sbjct: 216 QRVYGTAWADKKQLKAYLQRLEEAEKRDHRKIGKAQDLFHWQEEAPGMVFWHHNGWTIFR 275 Query: 189 -----------EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL- 236 E+ Y EV P+++ +G KF+D MF T+ ++ Sbjct: 276 ELEDFVREKLREYQYQEVKGPMMMDRVLWEKSGHWEKFSDLMFTTSSENREYAVKPMNCP 335 Query: 237 --TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +++ + + LPLR R+E A G++R F + + E+ Sbjct: 336 GHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHVFCTEDQ 392 Query: 295 SFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLG------------FSACKTYDLE- 338 E + E + ++ + LG A K +D++ Sbjct: 393 VQDEVAACIKMVYETYETFGFDKIDVKLSTRPEKRLGDDATWDRSEKALADALKAHDIDF 452 Query: 339 VWLAGQNLY 347 +L G+ + Sbjct: 453 TYLPGEGAF 461 >gi|195937403|ref|ZP_03082785.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024] gi|261227789|ref|ZP_05942070.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000] gi|261258046|ref|ZP_05950579.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966] gi|320641567|gb|EFX10955.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101] gi|320646926|gb|EFX15759.1| threonyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89] gi|320668281|gb|EFX35108.1| threonyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61] Length = 622 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 85 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 414 >gi|187924732|ref|YP_001896374.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|238689588|sp|B2SZG2|SYT_BURPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187715926|gb|ACD17150.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 635 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 14/202 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + ++ GY E+ P+++ +G Sbjct: 250 LDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + ++H + + LPLR+ R+E+ Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + E+ +E + A + K + L L Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDNVEIKLS---L 421 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 A D E W + RE Sbjct: 422 RPDARAGTD-ETWDRAEQGLRE 442 >gi|67459371|ref|YP_246995.1| threonyl-tRNA synthetase [Rickettsia felis URRWXCal2] gi|73919821|sp|Q4UKU3|SYT_RICFE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|67004904|gb|AAY61830.1| Threonyl-tRNA synthetase [Rickettsia felis URRWXCal2] Length = 635 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 71/235 (30%), Gaps = 10/235 (4%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + + + + E + + D A+ V Sbjct: 215 QRIYGTAWATKEQLDNYLFMLEEAEKRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYN 274 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL- 236 + I ++GYTEV P+LV +G KF +DMF + ++ Sbjct: 275 TIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASGHWEKFREDMFALETDDKTLALKPMNCP 334 Query: 237 --TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ I + LPLR + R+EA A G++R + + EE Sbjct: 335 CHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALH---GLMRVRSLVQDDAHIFCAEEQ 391 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E E+ K V + EVW +N +E Sbjct: 392 ITDETVSFCKLLTEVYKDFGFTDIKVKFSDR----PEIRAGSDEVWDKAENALKE 442 >gi|167570156|ref|ZP_02363030.1| threonyl-tRNA synthetase [Burkholderia oklahomensis C6786] Length = 635 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + GY E+ P+++ +G Sbjct: 250 LDLFHIQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T + ++ ++ H + + LPLR+ R+EA A Sbjct: 310 QNYRENMFTTESEKRDYAVKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE +E A + + Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEEQINSEAIAFNKLAMSVYEDFGF 412 >gi|167562968|ref|ZP_02355884.1| threonyl-tRNA synthetase [Burkholderia oklahomensis EO147] Length = 635 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + GY E+ P+++ +G Sbjct: 250 LDLFHIQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T + ++ ++ H + + LPLR+ R+EA A Sbjct: 310 QNYRENMFTTESEKRDYAVKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE +E A + + Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEEQINSEAIAFNKLAMSVYEDFGF 412 >gi|254466098|ref|ZP_05079509.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I] gi|206687006|gb|EDZ47488.1| threonyl-tRNA synthetase [Rhodobacterales bacterium Y4I] Length = 648 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 92/317 (29%), Gaps = 24/317 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + ++++K + +I K +++R I V+ +++ Sbjct: 110 DRAEPFTPEDLGAIEKKMKEIINKRDEVRTEVWERDRAIQHYTDNNEPYKVELIESIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSSRAMLQRIYGVAFTG 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + +H+ E + + D A + Q + Sbjct: 230 KEKLKAHLHMLEEAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWKVYTTLQDYMRRQQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 + GY EV+ P +V +G K+ ++MF R + + + Sbjct: 290 EKGGYVEVNTPQVVDRRLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I + LPLR R E A G++R F + + E+ E Sbjct: 350 IFNQGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDAHIFCAEDQIEAE 406 Query: 299 HERMLSCAEEILKRLDL 315 ++ + EI K L Sbjct: 407 TKKFIDFLSEIYKDLGF 423 >gi|296163127|ref|ZP_06845898.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1] gi|295886629|gb|EFG66476.1| threonyl-tRNA synthetase [Burkholderia sp. Ch1-1] Length = 635 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 14/202 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + ++ GY E+ P+++ +G Sbjct: 250 LDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + ++H + + LPLR+ R+E+ Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + E+ +E + A + K + L L Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDNVEIKLS---L 421 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 A D E W + RE Sbjct: 422 RPDARAGTD-ETWDRAEQGLRE 442 >gi|283785057|ref|YP_003364922.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168] gi|282948511|emb|CBG88100.1| threonyl-tRNA synthetase [Citrobacter rodentium ICC168] Length = 642 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ VV L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PEKRIGSDEMW 434 >gi|329296183|ref|ZP_08253519.1| threonyl-tRNA synthetase [Plautia stali symbiont] Length = 642 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + MF T + P + +++ + + LPLR R+E A Sbjct: 311 DNYKEVMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + ++ VV L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQVRDEVNSCIRMVYDMYSTFGFEKIVVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PEKRIGSDEMW 434 >gi|323526736|ref|YP_004228889.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001] gi|323383738|gb|ADX55829.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1001] Length = 635 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 66/202 (32%), Gaps = 14/202 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + ++H + + LPLR+ R+E+ Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + E+ +E + A + K + L L Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDNVEIKLS---L 421 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 A D E W + RE Sbjct: 422 RPDARAGTD-ETWDRAEQGLRE 442 >gi|262275836|ref|ZP_06053645.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886] gi|262219644|gb|EEY70960.1| threonyl-tRNA synthetase [Grimontia hollisae CIP 101886] Length = 642 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 92/312 (29%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D + + ++ I R + I + D ++ T K ++ + Sbjct: 105 DVDLDRSLTQEDLDAIEKRMKELAKTKYPVIKKNVSWQEARDTFESRGETYKMEILDENV 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE------- 140 +++ ++ I + + + + + + S + + Sbjct: 165 SRDDRPGLYHHEEYIDMCRGPHVPHMGFCQNFKILNVAGAYWRGNSDNKMLQRIYGTAFS 224 Query: 141 -------HFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 H + E D D A V H + + + Sbjct: 225 DKKELKAHLQRLEEAAKRDHRKLGKQLDLYHMQQEAPGMVFWHHNGWVVFRELEAFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 +E+ Y EV PL++ +G K+AD MF T L P + +++ Sbjct: 285 LAEYNYQEVKGPLIMDRVLWERSGHWDKYADYMFTTQSENREYALKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTPEQVQQEVTSCI 401 Query: 304 SCAEEILKRLDL 315 + K Sbjct: 402 KMVYDTYKTFGF 413 >gi|89900130|ref|YP_522601.1| threonyl-tRNA synthetase [Rhodoferax ferrireducens T118] gi|89344867|gb|ABD69070.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodoferax ferrireducens T118] Length = 669 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 51/159 (32%), Gaps = 6/159 (3%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 A V + + ++GY EV P ++ TG K+ ++M Sbjct: 285 DHAPGLVFWHPKGWTLWQGVEQYMRQVYRDNGYQEVKGPQILDKSLWEKTGHWDKYRENM 344 Query: 220 FCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 F T + ++ ++ I + LPLR+ R+E G++ Sbjct: 345 FTTESEKREYALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPSGGLH---GIM 401 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R F + + E+ E + +++ Sbjct: 402 RVRGFTQDDGHIFCTEDQILQECVDYTALLQKVYADFGF 440 >gi|107102275|ref|ZP_01366193.1| hypothetical protein PaerPA_01003332 [Pseudomonas aeruginosa PACS2] Length = 621 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + +HGY EV P +V +G Sbjct: 231 LDLFHLQEEAPGMVFWHPNGWSVYQVLEQYMRKVQRDHGYVEVRTPQVVDRILWERSGHW 290 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T+ + + +++ + + LPLR R+E A Sbjct: 291 SNYAENMFTTSSESRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 350 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ + + L T Sbjct: 351 H---GIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLQVYRDFGFTDIAMKLSTR---- 403 Query: 330 SACKTYDLEVWLAGQNL 346 A + E+W + Sbjct: 404 PAKRVGSDELWDRAEGA 420 >gi|294677983|ref|YP_003578598.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] gi|294476803|gb|ADE86191.1| threonyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] Length = 648 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 88/334 (26%), Gaps = 40/334 (11%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + ++ + + +I E +R S I V+ Sbjct: 110 DRAEPFTPEDLGQIEARMKQIINAREPVRTEVWSREDAIAHYEKSNEPYKVE-------- 161 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV----------- 128 L ++P E + + L +VP ++ Sbjct: 162 LVNRIPEGEDLRMYWHGNWQDLCRGPHLQHTGQVPADAFKLTHVAGAYWLGDSTRPMLQR 221 Query: 129 ---------GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + + + E + + D A V Sbjct: 222 IYGIAFRTRDDLKAHMTMLEEAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTIYTTL 281 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVS 235 Q + GY EV+ P +V + +G + ++MF R + + Sbjct: 282 QDYMRRRQRADGYVEVNTPQVVNRKLWEASGHWENYRENMFIVEVDEEGAREKVINALKP 341 Query: 236 LTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + +I + LPLR R E A G++R F + + Sbjct: 342 MNCPCHVQIFNVGLKSYRDLPLRMAEFGSCARYEPSGALH---GIMRVRGFTQDDAHIFC 398 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 E+ E ++ + + L + L T Sbjct: 399 MEDQIEAETKKFIEFLSAVYADLGFDKWRIKLST 432 >gi|120554978|ref|YP_959329.1| threonyl-tRNA synthetase [Marinobacter aquaeolei VT8] gi|166223352|sp|A1U2C3|SYT_MARAV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120324827|gb|ABM19142.1| Ser-tRNA(Thr) hydrolase [Marinobacter aquaeolei VT8] Length = 641 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 60/191 (31%), Gaps = 10/191 (5%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + +HGY E+ P +V +G KF Sbjct: 254 HMQEEAPGMVFWHPDGWSLYQEVEQYMRAQQHKHGYKEIKTPQVVSRTLWEKSGHWDKFK 313 Query: 217 DDMFCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 DDMF T + I +++ + K LPLR R+EA A Sbjct: 314 DDMFTTESEKHDYAIKPMNCPCHVQVFNQGLKSYKDLPLRLAEFGSCHRNEASGALH--- 370 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 G++R F + + E+ E ++ EI + L T + Sbjct: 371 GLMRVRGFTQDDAHIFCEEDAIQEEVSAFIAMLHEIYADFGFSEILYKLSTR----PEKR 426 Query: 334 TYDLEVWLAGQ 344 EVW + Sbjct: 427 VGSDEVWDKSE 437 >gi|311279396|ref|YP_003941627.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1] gi|308748591|gb|ADO48343.1| threonyl-tRNA synthetase [Enterobacter cloacae SCF1] Length = 642 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 311 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ VV L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PEKRIGSDEMW 434 >gi|294636227|ref|ZP_06714641.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685] gi|291090484|gb|EFE23045.1| threonine--tRNA ligase [Edwardsiella tarda ATCC 23685] Length = 622 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 33/321 (10%), Positives = 88/321 (27%), Gaps = 39/321 (12%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETS 78 + ++ L+ D+ ++ + R + + + I + ++ ++E+ Sbjct: 84 YDVDLDHTLTQDD--------LDRLEKRMHELAEKDYDVIKKKVSWQEARDAFVARDESY 135 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 + + ++ ++ + + + + + S + Sbjct: 136 KVAILDENISHDDKPGLYHHEEYVDMCRGPHVPNMRFCHHFKLQKSSGAYWRGDSNNKML 195 Query: 139 REHFEIGEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERA 177 + + A D A V + Sbjct: 196 QRIYGTAWADKKQLNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFR 255 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEV 234 + + + + Y EV P ++ TG + D MF T + P + Sbjct: 256 ELEAFVRMKLKAYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCP 315 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +++ + + LPLR R+E + G++R F + + EE Sbjct: 316 GHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQ 372 Query: 295 SFTEHERMLSCAEEILKRLDL 315 E + ++ Sbjct: 373 IRDEVNSCIKMVYDMYSTFGF 393 >gi|253998429|ref|YP_003050492.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|313200504|ref|YP_004039162.1| threonyl-tRNA synthetase [Methylovorus sp. MP688] gi|253985108|gb|ACT49965.1| threonyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|312439820|gb|ADQ83926.1| threonyl-tRNA synthetase [Methylovorus sp. MP688] Length = 640 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 50/162 (30%), Gaps = 6/162 (3%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + ++GY EV P ++ +G + Sbjct: 259 HMQDEAPGMVFWHPRGWNLWQEVEQYMRGLFRQYGYQEVKTPTIMDRSLWEKSGHWQNYR 318 Query: 217 DDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 ++MF T + P + +++ + + LPLR R+E A Sbjct: 319 ENMFTTSSENRDYAVKPMNCPGHIQIFNSGLHSYRDLPLRLAEFGSCHRNEPSGALH--- 375 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + + K Sbjct: 376 GLMRVRGFTQDDAHIFCTEDQVKQEVADFIVMLYQAYKDFGF 417 >gi|160914239|ref|ZP_02076460.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991] gi|158433866|gb|EDP12155.1| hypothetical protein EUBDOL_00249 [Eubacterium dolichum DSM 3991] Length = 610 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 92/307 (29%), Gaps = 21/307 (6%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++++ + + + R R S + G+ L + Sbjct: 91 EDLAKIEKEMKKI--AKDGKRIVRKEISKDEALEMF-GDDPYKVDLIQDLEDGNITCYQQ 147 Query: 88 EKEEHEVCSSLKKLISCIPNVP---LEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 + + + + N AN +L R G EH + Sbjct: 148 GEFIDLCRGPHVESVKQLKNFKLLKHSGAYWKGDANNKVLQRIYGVCFPTAEELEEHLHL 207 Query: 145 GEALGLMDFDR--------ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 E D + + L L F + HT EH Y + Sbjct: 208 LEEAKKRDHKKLGRELGIFMMSEYAPGMPFFLPNGMILRNILENFWYEEHTKEH-YQFIK 266 Query: 197 APLLVRDEAMYGTGQIPKFADDMF--CTTDGRWLIPTSEVSLTNL-YSHEIIESKSLPLR 253 P+++ E +G + ++M+ D + I L Y + K PLR Sbjct: 267 TPIMMSKELWETSGHWDNYKENMYISMVDDREFAIKPMNCPGALLAYKAGLHSYKDFPLR 326 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 L R EA A G+ R F + + R + +E ++S + I L Sbjct: 327 MGELGQVHRHEASGAL---NGLFRVRTFTQDDAHIFMRPDQIESEVMSLISFIDRIYASL 383 Query: 314 DLHYRVV 320 L YR+ Sbjct: 384 GLSYRIE 390 >gi|126667900|ref|ZP_01738865.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17] gi|126627560|gb|EAZ98192.1| threonyl-tRNA synthetase [Marinobacter sp. ELB17] Length = 641 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 56/158 (35%), Gaps = 7/158 (4%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + + + Q+M D+ HGY E+ P +V +G KF + MF Sbjct: 259 APGMVFWHPDGWTIYQKMEQYMRDI-LHRHGYQEIKTPQIVSRSLWEKSGHWDKFKEGMF 317 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + K LPLR R+EA A G++R Sbjct: 318 TTESEKHDFAIKPMNCPCHIQVFNQGLKSYKDLPLRLAEFGSCHRNEASGALH---GLMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E D E + + E+ K Sbjct: 375 VRGFTQDDAHIFCEESDIQNEVSKFIDLLHEVYKDFGF 412 >gi|271500480|ref|YP_003333505.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586] gi|270344035|gb|ACZ76800.1| threonyl-tRNA synthetase [Dickeya dadantii Ech586] Length = 642 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + MF T + P + +++ + + LPLR R+E + Sbjct: 311 ENYKEAMFTTSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIKMVYDMYSTFGF 413 >gi|260597637|ref|YP_003210208.1| threonyl-tRNA synthetase [Cronobacter turicensis z3032] gi|260216814|emb|CBA30296.1| Threonyl-tRNA synthetase [Cronobacter turicensis z3032] Length = 642 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 311 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHVFCTEEQVRDEVNSCIRMVYDMYSTFGF 413 >gi|291519633|emb|CBK74854.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Butyrivibrio fibrisolvens 16/4] Length = 588 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 88/320 (27%), Gaps = 27/320 (8%) Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEV-----CSSLKKLISCI 105 R S + + + +D L N + + ++ + KL Sbjct: 79 RREISKAEALEMFKDDPYKID-LINNMDEDTQTISCYDQGDFTDLCRGPHVDNVKLCRYF 137 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGA--- 162 + A +L R G EH + E D + K Sbjct: 138 KLIKHSGAYWKGDAENQVLNRVYGVCFPTQEQLDEHLALLEEAKERDHRKIGKDMQLFMA 197 Query: 163 --------RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 + G+ E + I + GY V P + + +G Sbjct: 198 DDLIGRGLPMYLPNGYTIWTE---LENYIRNKERKLGYLHVMTPCVGTVQLYQTSGHWDH 254 Query: 215 FADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 + ++MF + + + K LP+R +A FR E+ Sbjct: 255 YKENMFPAMEVEGESFVLRPMNCPHHMRIFANRPHSYKELPIRIAEIAHDFRFESSG--- 311 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFS 330 +G+ R F + + +E +E + + + + L D + Sbjct: 312 TLKGIERGRHFCQNDSHIFCTQEQIKSEVKSVCDLIFSTYEDFGITDYRCVLSLRDPADT 371 Query: 331 ACKTYDLEVWLAGQNLYREI 350 D E+W + RE Sbjct: 372 KKYHQDDEMWNTAEQALRET 391 >gi|251789558|ref|YP_003004279.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591] gi|247538179|gb|ACT06800.1| threonyl-tRNA synthetase [Dickeya zeae Ech1591] Length = 642 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 83/312 (26%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSN-SAQIGQAIAEGNLSLVDA---LKNETSTLKEQLPIL 87 +D + + +E + R + S + + + E+ + + Sbjct: 105 DVDLDRTLTQEDLELLEKRMHELASKDYDVVKKKVSWQEARDTFTARGESYKVAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 +++ ++ I + + + + S + + + A Sbjct: 165 SRDDRPGLYHHEEYIDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + + Sbjct: 225 DKKQLSAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + + MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + E+ E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEDQVRDEVNNCI 401 Query: 304 SCAEEILKRLDL 315 ++ Sbjct: 402 KMVYDMYSTFGF 413 >gi|157370384|ref|YP_001478373.1| threonyl-tRNA synthetase [Serratia proteamaculans 568] gi|166987325|sp|A8GDQ5|SYT_SERP5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157322148|gb|ABV41245.1| threonyl-tRNA synthetase [Serratia proteamaculans 568] Length = 642 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 33/315 (10%), Positives = 82/315 (26%), Gaps = 37/315 (11%) Query: 32 SLDEKNRILIKKIEDIRARRNSNS-AQIGQAIAEGNLSLVDALKN------ETSTLKEQL 84 +D + + ++ + R + + + + + + L E + Sbjct: 105 DVDIDRTLTQEDLDLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENI 164 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 ++ ++ + + + + + S + + + Sbjct: 165 SHDDRPG---LYHHEEYVDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGT 221 Query: 145 GEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 A D A V + + + Sbjct: 222 AWADKKQLNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFV 281 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLY 240 + E+ Y EV P ++ TG + D MF T + P + ++ Sbjct: 282 RMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIF 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + + + LPLR R+E + G++R F + + EE E Sbjct: 342 NQGLKSYRDLPLRMGEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQVRAEVN 398 Query: 301 RMLSCAEEILKRLDL 315 + ++ Sbjct: 399 ECIRMVYDVYGTFGF 413 >gi|192360042|ref|YP_001982990.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107] gi|238692463|sp|B3PL16|SYT_CELJU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190686207|gb|ACE83885.1| threonyl-tRNA synthetase [Cellvibrio japonicus Ueda107] Length = 642 Score = 57.5 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 FD A V + + ++ GY EV PL++ +G Sbjct: 251 FDLFHLQDEAPGMVFWHPKGWTLWQQIEQYMRAKQNDWGYQEVRTPLIMDRVLWEKSGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T + ++ +++H + K LPLR R+EA A Sbjct: 311 ENYRENMFTTESEKRDFAVKPMNCPGHVQIFNHGLRSHKDLPLRLAEFGSCHRNEASGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + + Sbjct: 371 H---GIMRVRGFVQDDAHIFCTEDQVVAEVAAFNQMLKSVYDDFGF 413 >gi|319898981|ref|YP_004159074.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73] gi|319402945|emb|CBI76496.1| Threonyl-tRNA synthetase [Bartonella clarridgeiae 73] Length = 658 Score = 57.5 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 87/298 (29%), Gaps = 31/298 (10%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R + + +++K R +I++ + R S + + I L + Sbjct: 111 RKQPFTLDDLTIIEKKMREIIQRNKPFRKEI--WSREKAKKIFSEKNELYK--IELIDAI 166 Query: 81 KEQLPILEKEEHEVCSSLKKLISC--------IPNVPLEEVPIGTSANENILIRSVGKKP 132 + + + + + + + AN +L R G Sbjct: 167 PDDQDLKVYYQGDWFDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAF 226 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDL 185 + + + + + E D R + + + Sbjct: 227 TNENDLKVYLHMLEETEKRDHRRLGREMDLFHFQEEGPGMIFWHPKGWKMFQNLISYMRR 286 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------TDGRWLIPTSEVSL--- 236 +H Y EV AP ++ +G + ++MF T + ++ ++ Sbjct: 287 RLDDHKYAEVQAPQVLDKSLWEVSGHWRWYKENMFKTIPAADDWNNEYIYALKPMNCPGH 346 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ H + + LP+R R E + G++R F + + EE Sbjct: 347 VQIFKHGLKSYRDLPIRLAEFGLVHRYEPSGSLH---GLMRARSFTQDDAHIFCTEEQ 401 >gi|84391304|ref|ZP_00991635.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01] gi|84376593|gb|EAP93471.1| threonyl-tRNA synthetase [Vibrio splendidus 12B01] Length = 460 Score = 57.5 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 98/337 (29%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D ++ + + +E I R + Q + + DA + K ++ + Sbjct: 106 DIDLEHSLTQEDLEKIDKRMKELAKTKYQVVKKKVSWQEARDAFEARGEAYKIEILDENV 165 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K++ ++ I + + + + + S + + + Sbjct: 166 SKDDRPGLYHHEEYIDMCRGPHVPHMGFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFH 225 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V H + I Sbjct: 226 DKKALKAHLVRLEEAAKRDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFIRQK 285 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +E+ Y EV PL++ +G K+A+ MF T + P + +++ Sbjct: 286 LTEYDYQEVKGPLMMDRVLWERSGHWDKYAEAMFTTSSENREYAIKPMNCPGHVQIFNQG 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E+ E + + Sbjct: 346 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHVFCTEDQVQQEVKACI 402 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + VV L T + E+W Sbjct: 403 EMVYDTYTTFGFENIVVKLSTR----PEQRVGSDEMW 435 >gi|296449369|ref|ZP_06891150.1| threonine--tRNA ligase [Clostridium difficile NAP08] gi|296880697|ref|ZP_06904650.1| threonine--tRNA ligase [Clostridium difficile NAP07] gi|296261715|gb|EFH08529.1| threonine--tRNA ligase [Clostridium difficile NAP08] gi|296428315|gb|EFH14209.1| threonine--tRNA ligase [Clostridium difficile NAP07] Length = 670 Score = 57.5 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 105/350 (30%), Gaps = 45/350 (12%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG----NLSLVDALKNETSTLKEQLPIL 87 +D +R++ + +E I A + + E ++ +K + K +L Sbjct: 136 DIDLDHRLVPEDLEKIEAEMKKIAKE--DLKIERFELPRNEALELMKEQGEDYKVELISD 193 Query: 88 EKEEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKP 132 E + + + + P N +L R G Sbjct: 194 LPESEIISFYKQGDFTDLCRGPHLPSTKKVKAVKLQSVAGAYWRGDENNKMLQRIYGTSF 253 Query: 133 SAIHLSREHFEIGEALGLMD----------FDRATKLSGARFSVLTGHLAHLERALGQFM 182 E+ + E D F + G + G E Sbjct: 254 EKNKDLEEYLHLLEEAKKRDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWRE 313 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNL 239 I GY E+ +P+++ + +G + ++M+ + + P + Sbjct: 314 IHRKA---GYIEIESPIILNRKLWETSGHWYHYKENMYTVKIDDEDYAIKPMNCPGGLIY 370 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ ++ + P+R L R E A + G++R F + + E E Sbjct: 371 YNSQLHSYRDFPMRVAELGRVHRHELSGALQ---GLMRVRAFTQDDSHIFMLPEQIKDEI 427 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + + + I K Y + + + E W A +N RE Sbjct: 428 KGVANLIDGIYKTFGFEYNLELSTRPENSMGS-----NEEWEAAENGLRE 472 >gi|167040680|ref|YP_001663665.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|307724045|ref|YP_003903796.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|166854920|gb|ABY93329.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|307581106|gb|ADN54505.1| threonyl-tRNA synthetase [Thermoanaerobacter sp. X513] Length = 634 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 88/314 (28%), Gaps = 32/314 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEK 89 D + E I N + + + ++ + K +L Sbjct: 104 DFDTDRPFTTEDFEAIEQEMNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIP 163 Query: 90 EEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSA 134 E E+ + + + P +L R G Sbjct: 164 EGEEISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFPK 223 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 + ++ + E D + K F + L F H Sbjct: 224 KSMLDQYLHMLEEAKKRDHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEH 283 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 +HGY E+ P+++ +E +G + ++M+ T + + P + +Y Sbjct: 284 I-KHGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEIDGETYAIKPMNCPGAMLVYKST 342 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR L R E G++R F + + E E ++ Sbjct: 343 MHSYRDLPLRLCELGLVHRHELSGVLH---GLMRVRSFTQDDAHLFMTPEQVEDEILGVI 399 Query: 304 SCAEEILKRLDLHY 317 + + K Y Sbjct: 400 NLVDYFYKIFGFEY 413 >gi|157375257|ref|YP_001473857.1| threonyl-tRNA synthetase [Shewanella sediminis HAW-EB3] gi|189083624|sp|A8FV56|SYT_SHESH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157317631|gb|ABV36729.1| threonyl-tRNA synthetase [Shewanella sediminis HAW-EB3] Length = 642 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 104/343 (30%), Gaps = 35/343 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSA---QIGQAIAEGNLSLVD-ALKNETSTLKEQLPIL 87 +D +++ + I+ ++ R + ++ + + ++ + ET ++ + Sbjct: 105 DIDLDHKLTQEDIDALQKRMTQLAKTNYKVEKRVGSWQVARDTFEARGETYKMEVLDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K++ ++ + + + + + + + S + + + A Sbjct: 165 SKDDQPALYHHEEYVDMCRGPHVPNMKFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALKVHLNRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 ++ Y EV PL++ +G K+AD MF T + P + +++ Sbjct: 285 LGQYTYQEVKGPLMMDRVLWERSGHWDKYADAMFTTNSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + E+ E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHVFCTEDQVQQEVSACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + VV L T + D ++W + Sbjct: 402 KMVYDTYETFGFKDIVVKLSTR----PEKRIGDDDMWDRSEEA 440 >gi|58039289|ref|YP_191253.1| threonyl-tRNA synthetase [Gluconobacter oxydans 621H] gi|73919795|sp|Q5FSP9|SYT_GLUOX RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58001703|gb|AAW60597.1| Threonyl-tRNA synthetase [Gluconobacter oxydans 621H] Length = 645 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 52/170 (30%), Gaps = 8/170 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A + + Q + + Y EV P LV +G Sbjct: 249 REMDLFHIQEEAVGQIFWHRKGWRLYTVLQDYMRRAQERNNYEEVRTPQLVDRALWEASG 308 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEA 265 K+ ++MF T + + ++ H + + LPLR R E Sbjct: 309 HWDKYRENMFIATVEDEDKTLALKPMNCPCHVQIFRHGLRSYRELPLRMAEFGACHRYEP 368 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + ++ E + + E+ L Sbjct: 369 SGALH---GIMRVRGFTQDDAHIFCTDDQIADETAKFVKMLAEVYSDLGF 415 >gi|254252558|ref|ZP_04945876.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158] gi|124895167|gb|EAY69047.1| Threonyl-tRNA synthetase [Burkholderia dolosa AUO158] Length = 635 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 89/314 (28%), Gaps = 27/314 (8%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ----AIAEGNLSLVDALKNET 77 E I EK + K ++ ARR S +I E + + E+ Sbjct: 112 FTPEDLEKI----EKRMQELAKKDEPVARR-VVSRDEAAGYFRSIGEKYKAEIIESIPES 166 Query: 78 STLKEQLPI-LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 +K + + + + L R G + Sbjct: 167 DEIKLYSHGGFTDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKE 226 Query: 137 LSREHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 ++ + E D D + V + + ++ Sbjct: 227 DQDQYLHMLEEAEKRDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVND 286 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEI 244 GY E+ P+++ +G + ++MF T + + + + H + Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGL 344 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LPLR+ R+EA A G++R F + + EE E + Sbjct: 345 RSYRDLPLRYAEFGSCHRNEASGALH---GLMRVRGFVQDDAHIFCTEEQFIAESIAFNT 401 Query: 305 CAEEILKRLDLHYR 318 A + K + Sbjct: 402 LAMSVYKDFGFEHI 415 >gi|170732802|ref|YP_001764749.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] gi|238688618|sp|B1K091|SYT_BURCC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169816044|gb|ACA90627.1| threonyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] Length = 635 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 14/201 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + E+ +E + A + K + + L L Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDHIDIKLS---L 421 Query: 328 GFSACKTYDLEVWLAGQNLYR 348 D E W + R Sbjct: 422 RPDQRAGTD-ETWARAEQGLR 441 >gi|58617659|ref|YP_196858.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] gi|73919787|sp|Q5FGP1|SYT_EHRRG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58417271|emb|CAI28384.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 633 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 91/315 (28%), Gaps = 38/315 (12%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 S + ++EK R +IKK E + I +G V + ++ Sbjct: 112 FSSNELEKIEEKMREIIKKNESFIREVWTREEAIRFFSNKGEDYKV--------KIIAKI 163 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 PI E S L I + + S + + + + Sbjct: 164 PIHENITVYKQGSFIDL---CRGPHAPSTKISKAFKLTKVSGSYWEGNTNNAQLQRIYGT 220 Query: 145 GEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 + + + A + + + + I Sbjct: 221 AWRTEEELKLYLNNLIEVEKRDHRKIGKELELFHIQNEALGQIFWHEKGLIIYRIIENYI 280 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLY 240 +GY EV P L+ +G KF + MF + ++ ++ ++ Sbjct: 281 RKKLENNGYIEVKTPYLLSKTLWEQSGHWDKFREHMFLSEIDNKVVAIKPMNCPCHVQIF 340 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I K LPLR R EA A G++R F + + E+ E Sbjct: 341 NSKIRSYKDLPLRMAEFGTCHRYEASGALH---GLMRVRSFTQDDAHIFCTEDQIIEEAL 397 Query: 301 RMLSCAEEILKRLDL 315 + + E+ + Sbjct: 398 KFCNLLMEVYEVFGF 412 >gi|220903768|ref|YP_002479080.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254783519|sp|B8J4E4|SYT_DESDA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219868067|gb|ACL48402.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 647 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 7/164 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + L F H + GY V P L+R E +G + ++M Sbjct: 261 VAPGMVFWLPKGMLVRTILEDFWRKEHL-KRGYDIVQGPQLLRVETWQKSGHYDHYRENM 319 Query: 220 FCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + T ++ +Y +E+ + LP R+ L R E G+L Sbjct: 320 YFTQIEEDAYGVKPMNCISHMLIYGNELHSYRDLPQRYFELGVVHRHEKSGVLH---GLL 376 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 R QF + + I E E ++ +++ Y+V Sbjct: 377 RVRQFTQDDAHIICAPEQLEGEILEVIHLIRDLMNLFGFEYKVA 420 >gi|270261557|ref|ZP_06189830.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13] gi|270045041|gb|EFA18132.1| threonyl-tRNA synthetase [Serratia odorifera 4Rx13] Length = 642 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 33/315 (10%), Positives = 82/315 (26%), Gaps = 37/315 (11%) Query: 32 SLDEKNRILIKKIEDIRARRNSNS-AQIGQAIAEGNLSLVDALKN------ETSTLKEQL 84 +D + + ++ + R + + + + + + L E + Sbjct: 105 DVDIDRTLTQEDLDLLEKRMHELADKDYDVIKKKVSWQEARDTFAARGENYKVAILDENI 164 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 ++ ++ + + + + + S + + + Sbjct: 165 SHDDRPG---LYHHEEYVDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGT 221 Query: 145 GEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 A D A V + + + Sbjct: 222 AWADKKQLNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFV 281 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLY 240 + E+ Y EV P ++ TG + D MF T + P + ++ Sbjct: 282 RMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIF 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + + + LPLR R+E + G++R F + + EE E Sbjct: 342 NQGLKSYRDLPLRMGEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQVRAEVN 398 Query: 301 RMLSCAEEILKRLDL 315 + ++ Sbjct: 399 ECIRMVYDVYGTFGF 413 >gi|254796675|ref|YP_003081511.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois] gi|254589907|gb|ACT69269.1| threonyl-tRNA synthetase [Neorickettsia risticii str. Illinois] Length = 647 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 85/290 (29%), Gaps = 42/290 (14%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 + A+ V L + + I H Y EV P++ +G Sbjct: 253 MELFHLQEEAQGQVFWHENGFLLYRVLENYIRSKLKAHDYREVKTPVVYSKCLWERSGHW 312 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF ++MF ++ ++ + + LPLR R+EA A Sbjct: 313 SKFKENMFVIRSDDGEFSLKPMNCPAHIEVFKQSLKSYRDLPLRLAEFGMCHRNEASGAL 372 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGD 326 G++R F + + E E +E+ + L R Sbjct: 373 H---GLMRVRGFVQDDAHIFCTPEQICDETVAFCELLKEVYRDLGFTEVEVRFSDRPEVR 429 Query: 327 LGF-------------SACKTYDLEVWLAGQNLY----REISSCS------TCGNFQ--- 360 LG + K + G+ + E CG Q Sbjct: 430 LGNDETWDKAEIALKSAMDKAGLVYTLNPGEGAFYGPKIEFVLVDALKRKWQCGTLQVDF 489 Query: 361 --SRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENYLNADGSV 407 R+++ Y D K L+ + + R L ++E+Y DG Sbjct: 490 VLPERLDATYIDHEGKKQHPV-MLHRAILGTFERFLGILIEHY---DGKF 535 >gi|152996610|ref|YP_001341445.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1] gi|189083612|sp|A6VYI1|SYT_MARMS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|150837534|gb|ABR71510.1| threonyl-tRNA synthetase [Marinomonas sp. MWYL1] Length = 645 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 11/192 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 L +A+ Q+M ++ Y EV P +V +G K+ ++MF Sbjct: 260 APGMVFWHPKGWRLYQAVEQYMRQKQL-DNNYQEVKTPQIVDRVLWEKSGHWGKYHENMF 318 Query: 221 CTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + + +Y+ + + LP R R+E A G++R Sbjct: 319 TTHSENRDYAVKPMNCPCHIQVYNQGLKSYRDLPFRMAEFGSCHRNEPSGALH---GIMR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E E + E+ V L T + Sbjct: 376 VRNFVQDDGHIFVTEGQIQQEVSEFIDLLHEVYADFGFDNIVYRLSTR----PEQRVGSD 431 Query: 338 EVWLAGQNLYRE 349 EVW + E Sbjct: 432 EVWDKAEKALSE 443 >gi|110679173|ref|YP_682180.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114] gi|123362019|sp|Q168U9|SYT_ROSDO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|109455289|gb|ABG31494.1| threonyl-tRNA synthetase [Roseobacter denitrificans OCh 114] Length = 648 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 88/317 (27%), Gaps = 24/317 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K + +I K + +R + I A V+ + Sbjct: 110 DRAEAFSPEDLGLIEKKMKEIINKRDPVRTEVWDRARAIAHYEANDEPYKVELINAIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTG 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + + + E + + D A V Q + Sbjct: 230 KEKLKAHLTMLEEAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWSIYTTLQDYMRRKQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ + MF R + + + Sbjct: 290 RAAGYQEVNTPQVVDRKLWEASGHWDKYQEHMFIVEVDEDHAREKAVNALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I + LPLR R E A G++R F + + + RE+ E Sbjct: 350 IFNQGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDGHTFCREDQIEAE 406 Query: 299 HERMLSCAEEILKRLDL 315 ++ + + L Sbjct: 407 CAAFITYLSSVYQDLGF 423 >gi|114319929|ref|YP_741612.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Alkalilimnicola ehrlichii MLHE-1] gi|122312208|sp|Q0AAL5|SYT_ALHEH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114226323|gb|ABI56122.1| Ser-tRNA(Thr) hydrolase [Alkalilimnicola ehrlichii MLHE-1] Length = 641 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 54/166 (32%), Gaps = 9/166 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + G F G +LE Q I T HGY E+ P LV +G Sbjct: 253 FHLQEEAPGMAFWHPKGWQIYLE---VQEYIRRLTRGHGYQEIHTPQLVDRSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF D+MF T + + +Y+ + + LPLR R+E Sbjct: 310 DKFQDNMFITESESRDYAVKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRNEPSG-- 367 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + + Sbjct: 368 -TLHGLMRVRNFVQDDAHIFCTEDQIQQEVADFIDLVFKAYNDFGF 412 >gi|242239483|ref|YP_002987664.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703] gi|242131540|gb|ACS85842.1| threonyl-tRNA synthetase [Dickeya dadantii Ech703] Length = 642 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + MF T + P + +++ + + LPLR R+E + Sbjct: 311 ENYKEAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE TE + ++ V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVRTEVNSCIKMVYDMYGTFGFEKIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PEKRIGSDEMW 434 >gi|172087694|ref|YP_204597.2| threonyl-tRNA synthetase [Vibrio fischeri ES114] gi|197335357|ref|YP_002156016.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11] gi|171902287|gb|AAW85709.2| threonyl-tRNA synthetase [Vibrio fischeri ES114] gi|197316847|gb|ACH66294.1| threonyl-tRNA synthetase [Vibrio fischeri MJ11] Length = 642 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 103/340 (30%), Gaps = 41/340 (12%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D ++ + + ++ I R + Q I + D + T K ++ + Sbjct: 105 DIDMEHSLTQEDLDKIEKRMKDLAKTKYQVIKKNVSWQEARDTFEARGETYKIEILDENV 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG-- 145 K++ ++ I + + + + + + S + + + Sbjct: 165 SKDDRPGLYHHEEYIDMCRGPHVPNMSFCQNFKILNVAGAYWRGNSDNKMLQRVYGTAFQ 224 Query: 146 ------------EALGLMD----------FDRATKLSGARFSVLTGHLAHLERALGQFMI 183 E D F + G F G E + + Sbjct: 225 DKKLLKAHLIRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWTIFRE---LEVFV 281 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLY 240 +++ Y EV PL++ +G K+A+ MF T + P + ++ Sbjct: 282 REKLTQYDYQEVKGPLMMDRVLWERSGHWDKYAEAMFTTSSENREYAIKPMNCPGHVQIF 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + + + LPLR R+E A G++R F + + E E + Sbjct: 342 NQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHVFCTEAQVQQEVK 398 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + + + VV L T + E+W Sbjct: 399 SCIEMVYDTYQTFGFDNIVVKLSTR----PEQRVGSDEMW 434 >gi|303242609|ref|ZP_07329085.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] gi|302589866|gb|EFL59638.1| threonyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] Length = 635 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 99/333 (29%), Gaps = 44/333 (13%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + ++E+ + ++K ED++ R + + ++ + K + Sbjct: 111 PFSVEELAQIEEEMKKIVK--EDLKLERFTL----------PRDEAIKFMEEKGEPYKVE 158 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSV 128 L E + + + P + +L R Sbjct: 159 LIRDLPEGEIISFYKQGDFVDLCAGPHLESTGKIKAFKLLSVAGAYWRGNEKNKMLQRIY 218 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQ 180 G S ++ E D + K F L L Sbjct: 219 GTAFSKKSDLDDYLFRLEEAKKRDHRKLGKELDLFDIYEEGPGFPFFMPKGMMLRNLLEN 278 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVSLT 237 + + H GY E+ P+++ ++ + +G + ++M+ T + P + Sbjct: 279 YWREEH-KARGYQEIRTPIILNEDLWHRSGHWDHYKENMYFTKIDEGDYAIKPMNCPGGM 337 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +Y ++ + LP R L R E A G++R F + + E Sbjct: 338 LVYKRKLHSYRDLPQRMAELGLVHRHELSGALH---GLMRVRCFTQDDAHIFMTPEQIKD 394 Query: 298 EHERMLSCAEEILK--RLDLHYRVVSLCTGDLG 328 E +++ ++ H + + +G Sbjct: 395 EVLGVINLIDDFYNVFGFKYHVELSTRPEDSMG 427 >gi|323342132|ref|ZP_08082365.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464557|gb|EFY09750.1| threonine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 596 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 108/336 (32%), Gaps = 24/336 (7%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL--KNETSTLKE-QL 84 E + ++ R + ED R R + + I + + +D + + +T+ + Sbjct: 71 EDLPKIESMMRKI--AKEDKRITREELTKEEALEIFKDDSYKIDIINNLEDDATISAYRQ 128 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 K + + + +N +L R G ++ E Sbjct: 129 AEFIDLCRGPHVETTKKMKYFKLLKVSGAYWKGDSNNKMLQRVYGITFETEEDLNQYLEW 188 Query: 145 GEALGLMDFDRATKL--------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 EA D + K G F + L AL ++ + H + GY Sbjct: 189 LEAAKARDHKKLGKELELFMMSEFGPGFPFWLPNGMTLRHALDEYYYNAHI-KRGYVFTQ 247 Query: 197 APLLVRDEAMYGTGQIPKFADDMF---CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLR 253 P ++ E +G + ++M+ + P + +Y + + + LP+R Sbjct: 248 TPTMLNKELWEVSGHWENYRENMYTSTIDDREFAIKPMNCPGGMLVYKNGLHSYRDLPIR 307 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 + R EA A G+ R F + + RE+ E +L EI Sbjct: 308 LAEMGHVHRHEASGAL---NGLFRVRSFTQDDAHLFMREDQLQDEIVEILDFINEIYSTF 364 Query: 314 DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 L Y + + D++VW + +E Sbjct: 365 GLSYSIELSTRPE----DKYIGDIDVWDRSEQALKE 396 >gi|156934293|ref|YP_001438208.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894] gi|156532547|gb|ABU77373.1| hypothetical protein ESA_02124 [Cronobacter sakazakii ATCC BAA-894] Length = 453 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 62 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 121 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 122 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 181 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 182 H---GLMRVRGFTQDDAHIFCTEEQVRDEVNSCIRMVYDMYSTFGF 224 >gi|88608148|ref|YP_506185.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] gi|123763729|sp|Q2GEB1|SYT_NEOSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|88600317|gb|ABD45785.1| threonyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] Length = 637 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 86/290 (29%), Gaps = 42/290 (14%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 + A+ V + + + I HGY EV PL+ +G Sbjct: 253 MELFHLQEEAQGQVFWHENGFILYRVLENYIRNKLKTHGYREVKTPLVYNKCLWERSGHW 312 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF ++MF ++ +Y + + LPLR R+EA A Sbjct: 313 SKFKENMFVIRSDDGEFSLKPMNCPAHIEVYKQSLKSYRDLPLRLAEFGMCHRNEASGAL 372 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGD 326 G++R F + + + E +E+ + L R Sbjct: 373 H---GLMRVRGFVQDDAHIFCTPQQICDETIAFCGLLKEVYRDLGFTEVEVRFSDRPEVR 429 Query: 327 LGF-------------SACKTYDLEVWLAGQNLY----REISSCS------TCGNFQ--- 360 LG + K + G+ + E CG Q Sbjct: 430 LGNDETWDKAEIALKSAMDKAGLIYTLNPGEGAFYGPKIEFVLVDALKRKWQCGTLQVDF 489 Query: 361 --SRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENYLNADGSV 407 R+++ Y D K L+ + + R L ++E+Y DG Sbjct: 490 VLPERLDATYIDHEGKKQHPV-MLHRAILGTFERFLGILIEHY---DGKF 535 >gi|254477067|ref|ZP_05090453.1| threonyl-tRNA synthetase [Ruegeria sp. R11] gi|214031310|gb|EEB72145.1| threonyl-tRNA synthetase [Ruegeria sp. R11] Length = 648 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 105/351 (29%), Gaps = 28/351 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + ++++K + +I K +++R I V+ +++ Sbjct: 110 DRAEPFTPEDLGAIEKKMKDIINKRDEVRTEVWERDRAIQHYTDNNEPYKVELIESIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI-----GTSANENILIRSVGKKPSA 134 ++ + + +P + + I ++ +L R G + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTG 229 Query: 135 IHLSREHFEIGEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMIDLHT 187 + H + E D + K A V Q + Sbjct: 230 KEKLKAHLTMLEEAAKRDHRKLGKEMGLFHMQEEAPGQVFWHPNGWRIYTQLQDYMRRMQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ ++MF R + + + Sbjct: 290 DRDGYVEVNTPQVVDRKLWEKSGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + LPLR R E A G++R F + + E+ +E Sbjct: 350 VFNQGLKSYRDLPLRMAEFGSCARYEPSGALH---GIMRVRGFTQDDGHIFCAEDQITSE 406 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + ++ ++ L H + L T + E W + E Sbjct: 407 TAKFIAFLSKVYADLGFHNWTIKLSTR----PEKRIGSDETWDHMEQALGE 453 >gi|78186013|ref|YP_374056.1| threonyl-tRNA synthetase, class IIA [Chlorobium luteolum DSM 273] gi|78165915|gb|ABB23013.1| Ser-tRNA(Thr) hydrolase [Chlorobium luteolum DSM 273] Length = 677 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 67/218 (30%), Gaps = 23/218 (10%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 G+ V A + + L F+ D GY V P + E +G P ++D Sbjct: 290 IGSGLPVWLPKGAIIRQELETFLKDEQ-RRRGYLPVYTPHIGNIELYKRSGHYPYYSDSQ 348 Query: 220 FCTTDGRWLIPTSEV----SLTNLYSH-----EIIESKSLPLRFTTLAPSFRSEAGSAGR 270 F E + + H E+ + LP+R T +R E Sbjct: 349 FPPLTYHDEDGKQEQYLLKPMNCPHHHLIYSSEMRSYRDLPIRLTEFGTVYRHEQSG--- 405 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFS 330 + G++R F + + R + E + + + + L L D Sbjct: 406 ELNGLVRARGFTQDDSHIYCRPDQLVDEICNAIDLTQFVFRTLGFDAVETRLSMHDPENQ 465 Query: 331 ACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 EVW + +E + RM +Y Sbjct: 466 TKYGGTPEVWEQAEKDVKEA----------ADRMGIKY 493 >gi|329849735|ref|ZP_08264581.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19] gi|328841646|gb|EGF91216.1| threonyl-tRNA synthetase [Asticcacaulis biprosthecum C19] Length = 640 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 90/314 (28%), Gaps = 25/314 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR---RNSNSAQIG--QAIAEGNLSLVDALKN 75 R ++ ++ K R ++ + E IR RN I ++I E + + Sbjct: 105 RDEPFSTDDFPKIEAKMREIVDRDEKIRREVWDRNHA---IAHFESIGEKYKAEIIRDLP 161 Query: 76 ETSTLK---EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 E+ + + S K + L N L R G Sbjct: 162 ESEDISVYFHGDAWKDLCLGPHLPSSKFIGKAFKLTKLAGAYWRGDHNNAQLQRIYGTAW 221 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDL 185 S+ + + E D + + R V + + + + Sbjct: 222 SSEADLEAYIQRIEEAEKRDHRKIGRAMDLFHMQEEGRGMVFWHPKGWVLWRVLEAYMRR 281 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEI- 244 GY EV P ++ +G K+ +MF + + + Sbjct: 282 RLDASGYVEVKTPQVLDRSFWEQSGHWEKYRANMFVCETVEGETLSLKPMNCPGHVQIFK 341 Query: 245 ---IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 K LP+R R E + G++R F + + RE+ E + Sbjct: 342 VGLRSYKELPIRMAEFGACHRYEPSGSLH---GLMRVRGFTQDDAHIFCREDQIVEETAK 398 Query: 302 MLSCAEEILKRLDL 315 + + I L + Sbjct: 399 FVRLTKLIHADLGM 412 >gi|254447322|ref|ZP_05060789.1| threonyl-tRNA synthetase [gamma proteobacterium HTCC5015] gi|198263461|gb|EDY87739.1| threonyl-tRNA synthetase [gamma proteobacterium HTCC5015] Length = 637 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 86/312 (27%), Gaps = 32/312 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSA---QIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 +D + + +E I R + + ++ + + VD K K ++ Sbjct: 105 DIDYERPFTPEDVEAIEQRIKALTKKDYEV-EVVVSNPQEAVDTFKQRDEPYKVEIASEI 163 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E EV + + + P + + + + + + + Sbjct: 164 PEGEEVKLYHHEEYTDMCRGPHVPNTRHLRHFKLMSVAGAYWRGDSDNKMLQRIYGTAWT 223 Query: 149 GLMDF----------------------DRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D D A V Q I Sbjct: 224 NKKDLKAHLTMLEEAEKRDHRKLAKSLDLFHMQEEAPGMVFWHDKGWQIYVQVQDYIRQL 283 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSL-TNLYSHE 243 +H Y EV P +V +G KF D +F T + + + +Y+ Sbjct: 284 LRQHDYQEVHTPQVVDRVLWEKSGHWDKFGDMIFSTHSENRDYAVKPMNCPCHVQIYNQG 343 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E G++R F + + E+ +E + Sbjct: 344 LKSYRDLPLRMAEFGSCHRNEPSG---TLHGLMRVRNFVQDDAHIFCTEDQIQSEVSAFI 400 Query: 304 SCAEEILKRLDL 315 ++ K Sbjct: 401 DLVFQVYKDFGF 412 >gi|302342263|ref|YP_003806792.1| threonyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] gi|301638876|gb|ADK84198.1| threonyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] Length = 627 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 57/181 (31%), Gaps = 7/181 (3%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + G V L L F H GY V P L++ E Sbjct: 235 KELDLFSFHEEIGPGMVVWHNRGMMLRMVLEDFERREHL-RRGYQIVQGPQLLKRELWER 293 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 +G + ++M+ T ++ +Y ++ + LP+R L R E Sbjct: 294 SGHYDNYRENMYFTEVDGTAYGVKPMNCLAHMLIYKSKMHSYRDLPIRMFELGTVHRHEK 353 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 G+ R F + + + R + E ++ E++ Y + Sbjct: 354 SGVL---GGLTRVRAFTQDDAHILCRPDQLEGEIMGVMDFVGEVMAIFGFDYGMELSTRP 410 Query: 326 D 326 D Sbjct: 411 D 411 >gi|170768863|ref|ZP_02903316.1| threonyl-tRNA synthetase [Escherichia albertii TW07627] gi|170122411|gb|EDS91342.1| threonyl-tRNA synthetase [Escherichia albertii TW07627] Length = 642 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDQPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|163737374|ref|ZP_02144791.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] gi|161388900|gb|EDQ13252.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] Length = 648 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 96/326 (29%), Gaps = 24/326 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + ++++K + +I K +++R I V+ +++ Sbjct: 110 DRAEPFTPEDLGTIEKKMKEIINKRDEVRTEVWERDRAIQHYTDLNEPYKVELIESIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTG 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + +H+ E + + + A + Q + Sbjct: 230 KEKLKAHLHMLEEAAKRDHRKLGREMNLFHMQEEAPGQIFWHPNGWKIYTTLQDYMRRMQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ ++MF R + + + Sbjct: 290 DRDGYVEVNTPQVVDRKLWEASGHWDKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + LPLR R E A G++R F + + E+ +E Sbjct: 350 VFNQGLKSYRDLPLRMAEFGSCARYEPSGALH---GIMRVRGFTQDDGHIFCAEDQIESE 406 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCT 324 + ++ ++ L H + L T Sbjct: 407 TAKFIAFLSKVYADLGFHDWTIKLST 432 >gi|238924616|ref|YP_002938132.1| threonyl-tRNA synthetase [Eubacterium rectale ATCC 33656] gi|238876291|gb|ACR75998.1| threonyl-tRNA synthetase [Eubacterium rectale ATCC 33656] Length = 676 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 106/345 (30%), Gaps = 42/345 (12%) Query: 43 KIEDIRARRNSNSAQ--------------IGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 ++ + A Q I + + E + L E E++ + Sbjct: 133 DLDALEAEMKKIIKQGHEITRFTLPREEAI-KFMKEKDEPYKVELIEELPE-GEEISFYD 190 Query: 89 KEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 + K + +N+ L R G + + H E Sbjct: 191 QGGFVDLCAGPHLMSTKGVKAFKLTASSMAYWRGDSNKARLHRIYGTAYNKKEDLKAHLE 250 Query: 144 IGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 E D ++ + + G ++ + L +++ DL E GY Sbjct: 251 RMEEAKKRDHNKLGREMELFTTVDVIGQGLPLMMPKGTKMIMKLQRWIEDLEDKEWGYVR 310 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLT---NLYSHEIIE 246 PL+ + + +G + D MF ++ ++ +Y + Sbjct: 311 TKTPLMAKSDLYKISGHWDHYLDGMFVLGDPEKDGEEEVMALRPMTCPFQYYVYKAKQHS 370 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP R + FR+E + G+ R QF E ++ R + E + + Sbjct: 371 YRDLPYRMGETSTLFRNEDSG---EMHGLTRVRQFTISEGHNVIRPDQCEEELKACFNLN 427 Query: 307 EEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 +LK L L V + D + D E W + Q + R I Sbjct: 428 RYVLKVLGLENDVTYRLSKWDPKNTEKYLGDDEYWNSTQEVLRNI 472 >gi|218548710|ref|YP_002382501.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|226701412|sp|B7LQ71|SYT_ESCF3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|218356251|emb|CAQ88868.1| threonyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|324113470|gb|EGC07445.1| threonyl-tRNA synthetase [Escherichia fergusonii B253] Length = 642 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDQPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|171318442|ref|ZP_02907597.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5] gi|171096356|gb|EDT41258.1| threonyl-tRNA synthetase [Burkholderia ambifaria MEX-5] Length = 635 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + ++ GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + EE E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEHI 415 >gi|170701132|ref|ZP_02892106.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] gi|170133954|gb|EDT02308.1| threonyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] Length = 635 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + ++ GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + EE E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEHI 415 >gi|255714212|ref|XP_002553388.1| KLTH0D15620p [Lachancea thermotolerans] gi|238934768|emb|CAR22950.1| KLTH0D15620p [Lachancea thermotolerans] Length = 453 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 9/160 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + + L FM ++ G+ EV PL+ R +G + +DM Sbjct: 49 VSPGSVFFLPNGTKIFNKLVNFMKLQQQNKFGFQEVITPLIYRKSLWEQSGHWENYKEDM 108 Query: 220 FCT------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 F + L P + ++ LPLR++ +P R+EA A Sbjct: 109 FRVEGQDLQKEEYGLKPMNCPGHCMVFKRFARSYNELPLRYSDFSPLHRNEASGALS--- 165 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 G+ R +F + + E +E + + + ++ Sbjct: 166 GLTRVRKFHQDDGHIFCIPEQVESEITKCIKMLDLCYTKV 205 >gi|168188008|ref|ZP_02622643.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund] gi|169294168|gb|EDS76301.1| threonyl-tRNA synthetase [Clostridium botulinum C str. Eklund] Length = 637 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 92/302 (30%), Gaps = 32/302 (10%) Query: 44 IEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 +E I N + Q + ++ +K K +L E+ + + Sbjct: 117 LEKIEKEMNKIVKENLQLKKFTKSREDAIEFMKERNEDYKVELIEDLPEDAVISFYEQGD 176 Query: 102 ISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 + P + N +L R G E+ + E Sbjct: 177 FVDLCAGPHVPSTKEVKAIKLLSVAGAYWRGNENNKMLQRIYGTAFIKKSELEEYLHMLE 236 Query: 147 ALGLMDFDR--------ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 D + K G F L L + ++H + GY E+ P Sbjct: 237 EAKKRDHRKLGRELGLFDLKEEGPGFPFFYPKGMILRNTLENYWREMH-EKAGYGEIRTP 295 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +++ ++ + +G + ++M+ T + + P + +Y ++ + LP+R Sbjct: 296 IILNEKLWHQSGHWDHYKENMYFTKIDGEDYAIKPMNCPGSILVYKSDLHSYRELPIRLG 355 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 L R E G++R F + + +E +E ++ + Sbjct: 356 ELGLVHRHE---YSGALHGLMRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGF 412 Query: 316 HY 317 Y Sbjct: 413 EY 414 >gi|152980466|ref|YP_001353177.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|166223349|sp|A6SY30|SYT_JANMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|151280543|gb|ABR88953.1| threonyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 635 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 11/180 (6%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 R+H ++G+ L F A + + + ++ Y EV AP Sbjct: 241 RDHRKLGKQLDFFHFQE-----EAPGLIFWHPKGWSIWQQVEQYMRKVYQDNDYQEVKAP 295 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFT 255 ++ TG + ++MF T ++ +Y+ ++ + LPLR+ Sbjct: 296 QILDRGLWEKTGHWDNYRENMFVTESENRSYALKPMNCPGHVQIYNSDMRSYRDLPLRYG 355 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R+E A GM+R F + + EE E + A + Sbjct: 356 EFGQCHRNEPSGALH---GMMRVRGFTQDDGHIFCTEEQIAEEVTAFHAQAMAVYAAFGF 412 >gi|74354209|gb|AAI02681.1| SARS protein [Bos taurus] Length = 71 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIGQ 60 IG+ Sbjct: 63 TIGE 66 >gi|124267077|ref|YP_001021081.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium petroleiphilum PM1] gi|166225459|sp|A2SH07|SYT_METPP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|124259852|gb|ABM94846.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Methylibium petroleiphilum PM1] Length = 635 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + ++GY EV P ++ TG K+ ++MF Sbjct: 258 HAPGLVFWHPKGWTVWQQVEQYMRAVYRDNGYLEVKGPQILDQGLWEKTGHWDKYRENMF 317 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T L P + +Y I + LPLR+ R+E G++R Sbjct: 318 VTESEKRDYALKPMNCPGHILIYKQGIKSYRDLPLRYGEFGQCHRNEPTGGLH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + EE E + +++ K + + + T + Sbjct: 375 VRGFTQDDGHIFCTEEHILPECVAYTALLQKVYKDFGFNDIIYKVATR----PEKRIGSD 430 Query: 338 EVWLAGQNLYREISSCSTCG 357 VW ++ E S C Sbjct: 431 AVWDKAEHALMESLRASGCE 450 >gi|115351412|ref|YP_773251.1| threonyl-tRNA synthetase [Burkholderia ambifaria AMMD] gi|122323391|sp|Q0BG06|SYT_BURCM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115281400|gb|ABI86917.1| Ser-tRNA(Thr) hydrolase [Burkholderia ambifaria AMMD] Length = 635 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + ++ GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + EE E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEHI 415 >gi|221214904|ref|ZP_03587872.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|221165131|gb|EED97609.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD1] Length = 635 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 55/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + EE E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEHI 415 >gi|327393701|dbj|BAK11123.1| Threonyl-tRNA synthetase ThrS [Pantoea ananatis AJ13355] Length = 642 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ TE + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQLRTEVNSCIRMVYDMYSTFGF 413 >gi|291525280|emb|CBK90867.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium rectale DSM 17629] gi|291529262|emb|CBK94848.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Eubacterium rectale M104/1] Length = 657 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 106/345 (30%), Gaps = 42/345 (12%) Query: 43 KIEDIRARRNSNSAQ--------------IGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 ++ + A Q I + + E + L E E++ + Sbjct: 114 DLDALEAEMKKIIKQGHEITRFTLPREEAI-KFMKEKDEPYKVELIEELPE-GEEISFYD 171 Query: 89 KEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 + K + +N+ L R G + + H E Sbjct: 172 QGGFVDLCAGPHLMSTKGVKAFKLTASSMAYWRGDSNKARLHRIYGTAYNKKEDLKAHLE 231 Query: 144 IGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 E D ++ + + G ++ + L +++ DL E GY Sbjct: 232 RMEEAKKRDHNKLGREMELFTTVDVIGQGLPLMMPKGTKMIMKLQRWIEDLEDKEWGYVR 291 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLT---NLYSHEIIE 246 PL+ + + +G + D MF ++ ++ +Y + Sbjct: 292 TKTPLMAKSDLYKISGHWDHYLDGMFVLGDPEKDGEEEVMALRPMTCPFQYYVYKAKQHS 351 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP R + FR+E + G+ R QF E ++ R + E + + Sbjct: 352 YRDLPYRMGETSTLFRNEDSG---EMHGLTRVRQFTISEGHNVIRPDQCEEELKACFNLN 408 Query: 307 EEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 +LK L L V + D + D E W + Q + R I Sbjct: 409 RYVLKVLGLENDVTYRLSKWDPKNTEKYLGDDEYWNSTQEVLRNI 453 >gi|291617247|ref|YP_003519989.1| ThrS [Pantoea ananatis LMG 20103] gi|291152277|gb|ADD76861.1| ThrS [Pantoea ananatis LMG 20103] Length = 642 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ TE + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQLRTEVNSCIRMVYDMYSTFGF 413 >gi|167758905|ref|ZP_02431032.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704] gi|167663312|gb|EDS07442.1| hypothetical protein CLOSCI_01251 [Clostridium scindens ATCC 35704] Length = 641 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 100/323 (30%), Gaps = 22/323 (6%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R +E + ++ + + ++K+ I + I E + L + Sbjct: 106 DRETPFVAEDLEKIEAEMKKIVKEALPIERFTKTREEAIA-YFKENDEPYKVELVEDLPE 164 Query: 80 LKEQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E++ ++ E K + L S +L R G Sbjct: 165 -GEEISFYKQGEFVDLCAGPHLMSTKAVKAFKLTSLAGAYWRGSEKNKMLTRIYGISYPK 223 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 E+ + E D + + G F L+ L + +LH Sbjct: 224 KADLEEYLHMMEEAKKRDHRKLGRELGLFMMCDEGPGFPFFLPKGMVLKNTLLDYWRELH 283 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 E+GY EVS P+++ +G + D+M+ T + + P + +Y E Sbjct: 284 -KENGYVEVSTPIILSRHLWENSGHWDHYKDNMYTTMIDEEDYAVKPMNCPGGMLVYKSE 342 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 K LPLR L R E A G+ R F + + E E + + Sbjct: 343 PRSYKDLPLRMGELGLVHRHEKSGALH---GLFRVRCFTQDDAHIFMTPEQIRDEIKGVA 399 Query: 304 SCAEEILKRLDLHYRVVSLCTGD 326 +EI Y V D Sbjct: 400 RLIDEIYSLFGFKYHVELSTRPD 422 >gi|221197733|ref|ZP_03570779.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M] gi|221204709|ref|ZP_03577726.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221175566|gb|EEE07996.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221181665|gb|EEE14066.1| threonyl-tRNA synthetase [Burkholderia multivorans CGD2M] Length = 635 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 55/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + EE E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEHI 415 >gi|172060451|ref|YP_001808103.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6] gi|238689138|sp|B1YP13|SYT_BURA4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|171992968|gb|ACB63887.1| threonyl-tRNA synthetase [Burkholderia ambifaria MC40-6] Length = 635 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + ++ GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + EE E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEHI 415 >gi|88810665|ref|ZP_01125922.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231] gi|88792295|gb|EAR23405.1| threonyl-tRNA synthetase [Nitrococcus mobilis Nb-231] Length = 641 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 60/187 (32%), Gaps = 13/187 (6%) Query: 139 REHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + + E D R K+ A V L Q + HG Sbjct: 229 QHYLHALEEAQRRDHRRLAKIQDLFHLQEEAPGMVFWHPNGWRVYLLLQDYLRAKLDAHG 288 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESK 248 Y EV P LV +G KF DMF T + + + +++ + + Sbjct: 289 YREVRTPELVDRSLWERSGHWQKFRADMFTTESEKRDYAVKPMNCPCHVQIFNQGLKSYR 348 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LPLR R+EA G++R F + + EE +E L AE Sbjct: 349 DLPLRLAEFGNCHRNEASG---TLHGLMRVRNFVQDDAHIFCTEEQIQSEVAGFLDLAEA 405 Query: 309 ILKRLDL 315 + + Sbjct: 406 VYRDFGF 412 >gi|332284530|ref|YP_004416441.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7] gi|330428483|gb|AEC19817.1| threonyl-tRNA synthetase [Pusillimonas sp. T7-7] Length = 648 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 68/210 (32%), Gaps = 10/210 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A + + + ++GY EV AP ++ TG Sbjct: 253 RELDLFHFQDEAPGLIFWHPKGWTLWQQVEQYMRSVYRDNGYQEVKAPQILDLSLWKKTG 312 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 +A++MF T + ++ +++ + + LP+R+ R+E Sbjct: 313 HWDNYAENMFTTESENRVYGLKPMNCPGHVQIFNAGLHSYRELPIRYGEFGQCHRNEPSG 372 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 + GM+R F + + E+ E + +++ + + T Sbjct: 373 SLH---GMMRVRGFTQDDGHIFCTEDQLQDECADFTALLQKVYADFGFTEILYKVATR-- 427 Query: 328 GFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + EVW + E S + C Sbjct: 428 --PEKRIGSDEVWDKAEQALMESLSRTGCE 455 >gi|325528727|gb|EGD05797.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 635 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 55/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + EE E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQFIAESIAFNTLAMSVYKDFGFEHI 415 >gi|300914721|ref|ZP_07132037.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561] gi|300889656|gb|EFK84802.1| Threonyl/alanyl tRNA synthetase SAD [Thermoanaerobacter sp. X561] Length = 634 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 88/314 (28%), Gaps = 32/314 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEK 89 D + E I N + + + ++ + K +L Sbjct: 104 DFDTDRPFTTEDFEAIEQEMNKIIKEDYKLERFVLPKDEAIKLMEEKGEPYKVELIEEIP 163 Query: 90 EEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSA 134 E E+ + + + P +L R G Sbjct: 164 EGEEISFYKQGEFTDLCAGPHLMSTGMVKTIKLLSVAGAYWKGDEKNKMLQRIYGISFLK 223 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 + ++ + E D + K F + L F H Sbjct: 224 KSMLDQYLHMLEEAKKRDHRKLGKELDLFSIHPEGPGFPFFHPKGMIIRNILEDFWRKEH 283 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 +HGY E+ P+++ +E +G + ++M+ T + + P + +Y Sbjct: 284 I-KHGYQEIKTPIILNEELWRRSGHWDHYKENMYFTEIDGETYAIKPMNCPGAMLVYKST 342 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR L R E G++R F + + E E ++ Sbjct: 343 MHSYRDLPLRLCELGLVHRHELSGVLH---GLMRVRSFTQDDAHLFMTPEQVEDEILGVI 399 Query: 304 SCAEEILKRLDLHY 317 + + K Y Sbjct: 400 NLVDYFYKIFGFEY 413 >gi|269139162|ref|YP_003295863.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|267984823|gb|ACY84652.1| threonyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|304559086|gb|ADM41750.1| Threonyl-tRNA synthetase [Edwardsiella tarda FL6-60] Length = 642 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 51/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E + Sbjct: 311 ENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSTFGF 413 >gi|256822932|ref|YP_003146895.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069] gi|256796471|gb|ACV27127.1| threonyl-tRNA synthetase [Kangiella koreensis DSM 16069] Length = 639 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 49/168 (29%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + I EH Y EV P +V +G Sbjct: 250 LDLFHIQEEAPGMIFWHDKGWTIYKTLEQYIRERLKEHDYQEVKTPQMVDRSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGS 267 KF DDMF + + +I + LPLR R+E Sbjct: 310 DKFGDDMFTLKSDE--RDYAIKPMNCPCHVQIFNVGLKSYRDLPLRMAEFGSCHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E+ E + ++ ++ Sbjct: 368 ALH---GIMRLRNFVQDDAHIFCTEDQIQEEVSKFIAMLYDVYADFGF 412 >gi|150389418|ref|YP_001319467.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|149949280|gb|ABR47808.1| threonyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 636 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 102/346 (29%), Gaps = 37/346 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQI--GQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 D ++R + + +E I A + + ++ +K + K +L Sbjct: 107 DFDTEHRFIPEDLEKIEAEMQKIVKEDLHVERFELSRDKAIELVKEQGEDYKLELIQDLP 166 Query: 90 EEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSA 134 E+ + + + + P +L R G + Sbjct: 167 EDAVISFYKQGEFTDLCAGPHVLSTGKIKAFKLLSIAGAYWRGDEKNKMLQRIYGTSFTK 226 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 H E E D + K F + + L F H Sbjct: 227 KADLEAHLERLEEAKKRDHRKIGKELDLFSLNEEGPGFPFFHPNGMIVRNELENFWRREH 286 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---GRWLIPTSEVSLTNLYSHE 243 T + GY E+ P+++ ++ +G + ++M+ T + P + +Y + Sbjct: 287 T-KRGYEEIKTPIILNEQLWKQSGHWDHYQENMYFTNIDDANYAVKPMNCPGSILMYKRK 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP+R L R E A G++R F + + E E ++ Sbjct: 346 MHSYRDLPIRMGELGLVHRHELSGALH---GLMRVRCFTQDDAHIFMLPEQIKDEILGVM 402 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + K Y + D E W N RE Sbjct: 403 NFVDYFYKVFGFKYHIELS----TRPKDSMGTD-EEWDLAINSLRE 443 >gi|148244740|ref|YP_001219434.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] gi|166225515|sp|A5CWF9|SYT_VESOH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146326567|dbj|BAF61710.1| threonyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 636 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 61/198 (30%), Gaps = 10/198 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 V + L + + ++GY EV P L+ +G KF D MF Sbjct: 256 ETPGMVFWHAKGWILYQLVEQYMRGIFRDNGYQEVHTPQLIDKSLWEKSGHWDKFGDVMF 315 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + P + + +Y+ + ++LPLR R+E G++R Sbjct: 316 TTTSGDRDYAVKPMNCPAHIQIYNQGLKSYRNLPLRLAEFGSCHRNEPSG---TLHGIMR 372 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E E + + K + L T + Sbjct: 373 VRNFVQDDGHIFCTPEQIQDEVSTFIDLTFNVYKYFGFEKINIKLSTR----PKKRVGSD 428 Query: 338 EVWLAGQNLYREISSCST 355 EVW + E + Sbjct: 429 EVWDKSEIALVEALNAKN 446 >gi|88607718|ref|YP_505783.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ] gi|88598781|gb|ABD44251.1| threonyl-tRNA synthetase [Anaplasma phagocytophilum HZ] Length = 615 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 53/169 (31%), Gaps = 7/169 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 D + + A V + + E+GYTE+ P+++ + +G Sbjct: 225 KDLEWFHIQNEALGQVFWHDKGWTLYRTIEEYLRKKLRENGYTEIKTPIMLDRKLWEKSG 284 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSEAG 266 KF ++MF +D + + + K LP+R R+E Sbjct: 285 HWEKFRENMFIVSDQNSQELAIKPMNCPCHVQIFKSKTRSYKDLPIRMAEFGMCHRNEPS 344 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + G++R F + + + E + E+ Sbjct: 345 GSLY---GLMRVRGFTQDDAHIFCTHDQIRDEVRKFYKLLVEVYNDFGF 390 >gi|328479294|gb|EGF48651.1| seryl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462] Length = 63 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 15 DIALKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 L R ++ + + +++LDEK R + + E+++A+RN S QI + Sbjct: 3 KKKLAARAIKGEEIDELIALDEKRRKVTVQTEELKAKRNEVSGQIAVMKRNKENADEQ 60 >gi|319404307|emb|CBI77900.1| Threonyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 654 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 90/296 (30%), Gaps = 27/296 (9%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS----LVDALKNE 76 R + + ++++K R +I++ + R S + + I + + Sbjct: 111 RKQPFTLDDLTTIEKKMREIIQRNKPFRKEI--WSREKAKKIFSEKNELYKVELIDAIPD 168 Query: 77 TSTLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 LK Q + S ++ + + + AN +L R G + Sbjct: 169 DQDLKVYYQGDWFDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFTN 228 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHT 187 + + + + E D R + + + + Sbjct: 229 ENDLKAYLHMLEEAEKRDHRRLGREMDLFHFQEESPGMIFWHPKGWKMFQNLISYMRRRL 288 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------TDGRWLIPTSEVSL---TN 238 H Y EV AP ++ +G + ++MF T + + ++ Sbjct: 289 DNHKYAEVQAPQVLDKSLWEISGHWGWYKENMFKTIPAADDWNDEYTYALKPMNCPGHVQ 348 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ H + + LP+R R E + G++R F + + EE Sbjct: 349 IFKHGLKSYRDLPVRLAEFGLVHRYEPSGSLH---GLMRVRSFTQDDAHIFCTEEQ 401 >gi|163746007|ref|ZP_02153366.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] gi|161380752|gb|EDQ05162.1| threonyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] Length = 648 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 90/317 (28%), Gaps = 24/317 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + ++++K + +I K + +R + I V+ + Sbjct: 110 DRKEPFTPEDLGAIEKKMKEIINKRDAVRTEVWDRARAIKHYEDLNEPYKVELINAIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTG 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + +++ E + + D A + Q + Sbjct: 230 KEKLRAHLNMLEEAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWSIYTQLQDYMRRQQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 + GY EV+ P +V + +G K+ D MF R + + + Sbjct: 290 RKGGYVEVNTPQVVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKAVNALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I + LPLR R E A G++R F + + E+ E Sbjct: 350 IFNQGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDGHIFCAEDQIEAE 406 Query: 299 HERMLSCAEEILKRLDL 315 + ++ EI + L Sbjct: 407 TAKFIAFLSEIYRDLGF 423 >gi|296102767|ref|YP_003612913.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057226|gb|ADF61964.1| threonyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 642 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 311 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGF 413 >gi|238919782|ref|YP_002933297.1| threonyl-tRNA synthetase [Edwardsiella ictaluri 93-146] gi|259516479|sp|C5B846|SYT_EDWI9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238869351|gb|ACR69062.1| threonyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146] Length = 642 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 51/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E + Sbjct: 311 ENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSTFGF 413 >gi|194366578|ref|YP_002029188.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] gi|238693469|sp|B4SQH4|SYT_STRM5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194349382|gb|ACF52505.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] Length = 633 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 96/343 (27%), Gaps = 43/343 (12%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQL--PILEKEEHEVCSSLKKL 101 + ++G+ IA+ +++ K K +L + + + ++ Sbjct: 119 AIEKRMGELIAQDYDVIKKVTPRAEVIEIFKARGEDYKLRLIEDMSDDIQAMGMYYHQEY 178 Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE--------------HFEIGEA 147 + + + + + + + + + + E Sbjct: 179 VDMCRGPHVPNTRFLKAFKLTRISGAYWRGDAQNEQLQRIYGTAWADKKQLEAYIKRIEE 238 Query: 148 LGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 + D R K A V + + + + GY EV P + Sbjct: 239 AEMRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWALWQVVEQYMRKVYRKTGYGEVRCPQI 298 Query: 201 VRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTL 257 + +G + D MF T + ++ +++ + + LP+R+ Sbjct: 299 LDVSLWQKSGHWDNYQDAMFFTESEKRTYALKPMNCPGHVQVFNQGLHSYRDLPIRYGEF 358 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 R+E A G+LR F + + E E A + + Sbjct: 359 GACHRNEPSGALH---GILRVRGFTQDDGHVFCTENQVEAEVTAFHQQALAVYQHFGFDE 415 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 V + L + D W + R S S +Q Sbjct: 416 IQVKIA---LRPESRLGDDA-TWDKAEGALRSALS-SNGVEWQ 453 >gi|322419731|ref|YP_004198954.1| threonyl-tRNA synthetase [Geobacter sp. M18] gi|320126118|gb|ADW13678.1| threonyl-tRNA synthetase [Geobacter sp. M18] Length = 636 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 95/319 (29%), Gaps = 26/319 (8%) Query: 23 LEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKN 75 + + + ++EK R L K D++ R+ S+ + + L Sbjct: 106 YDFDVDHPFTPEDLEKIEEKMRELAKA--DLKIERSELSSADAIELFRKMGEDYKVELIQ 163 Query: 76 ETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + K L + +L R G Sbjct: 164 DLGADKVSLYTQGDFSDLCRGPHLPKTSGCKAFKLTSIAGAYWRGDEKRAMLQRVYGTAF 223 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMID 184 + + E D + K V+ + R + + Sbjct: 224 ADKKELDAYLARIEEAKKRDHRKLGKELDLFSFNDEVGAGLVIWHPKGAMLRTILEDFER 283 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYS 241 + GY V P +++ E +G + ++M+ TT G + P + ++ +Y Sbjct: 284 KEHLKRGYDIVVGPQILKTELWQRSGHYENYRENMYFTTVDEQGYGVKPMNCLAHMMIYR 343 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 ++ + LPLR+ L R E G+LR F + + + E E + Sbjct: 344 SQLRSYRDLPLRYFELGTVHRHERAGVLH---GLLRVRGFTQDDAHILCTPEQLDAEIKG 400 Query: 302 MLSCAEEILKRLDLHYRVV 320 ++ E++ + + Sbjct: 401 VIQFVTEVMGIFGFEFEME 419 >gi|85059397|ref|YP_455099.1| threonyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans'] gi|123738953|sp|Q2NT31|SYT_SODGM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|84779917|dbj|BAE74694.1| threonyl-tRNA synthase [Sodalis glossinidius str. 'morsitans'] Length = 642 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + + Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTLFRELETFVRMKLKAYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E + Sbjct: 311 DNYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + ++ +V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQVRDEVNNCIKMVYDMYGTFGFEKILVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + +VW Sbjct: 424 PEKRIGSNDVW 434 >gi|332306910|ref|YP_004434761.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174239|gb|AEE23493.1| threonyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 638 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 70/203 (34%), Gaps = 11/203 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+ Y EV APL++ +G K+A++MF Sbjct: 259 EAPGMVFWHNDGWSIYTELEKFVRSKLREYEYQEVKAPLMMDRSLWEKSGHWDKYAENMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 TT + ++ +++ + + LPLR R+E A G++R Sbjct: 319 TTTSEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALH---GLMR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E+ E + EI K V L T + Sbjct: 376 VRGFTQDDAHIFCTEDQILAEVGGCIDSVYEIYKIFGFENISVKLSTR----PEKRVGSD 431 Query: 338 EVWLAGQNLYREISSCSTCGNFQ 360 EVW + E + S +FQ Sbjct: 432 EVWDKAEKELAE-ALTSKGIDFQ 453 >gi|126651397|ref|ZP_01723604.1| threonyl-tRNA synthetase [Bacillus sp. B14905] gi|126591926|gb|EAZ86009.1| threonyl-tRNA synthetase [Bacillus sp. B14905] Length = 643 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 116/343 (33%), Gaps = 22/343 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI--AEGNLSLVDALKNETSTLK 81 +E + +++++ + +I E++ R + S QA+ G+ ++ L+ + + Sbjct: 114 PITAEDLPAIEKEMKKII--AENLEVERKNVSRAEAQAMYEKIGDEYKLELLEAIPADEQ 171 Query: 82 EQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 + + + + L +++ +L R G Sbjct: 172 VSIYYQGEFFDLCRGIHVPSTGKLREFKLLSLAGAYWRGNSDNKMLQRIYGTAFFKKEEL 231 Query: 139 REHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 + H ++ E D + K L V G L A + +I+ + + Sbjct: 232 KHHLQMLEEAKERDHRKIGKELELFTTSQKVGQGLPLWLPNGATIRRVIERYIVDKELSL 291 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFADD----MFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + + P + +Y + + Sbjct: 292 GYKHVYTPVLGSKELYQTSGHWDHYQDSIFPPMEMDNETLIMRPMNCPHHMMVYKNSMHS 351 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 +SLPLR L R E A G+ R + R + E ++++ Sbjct: 352 YRSLPLRIAELGTMHRYEMSGA---VSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLI 408 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K DL+ L D + D +W Q++ +E Sbjct: 409 LEVYKDFDLNDYSFRLSYRDPADTEKYFNDDAMWEKAQSMLKE 451 >gi|327481051|gb|AEA84361.1| threonyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166] Length = 640 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 63/200 (31%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + E+GY EV P +V +G Sbjct: 250 LDLFHTQEEAPGMVFWHPAGWTLYQNLEQYMRQVQRENGYQEVRTPQVVDRILWEKSGHW 309 Query: 213 PKFADDMFCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T + + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTSSENRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ + L T Sbjct: 370 H---GIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLKVYADFGFSDIAMKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNLYRE 349 A + E+W ++ E Sbjct: 423 PAKRVGSDELWDRAESALAE 442 >gi|330816669|ref|YP_004360374.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327369062|gb|AEA60418.1| Threonyl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 635 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 88/311 (28%), Gaps = 27/311 (8%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 E I EK + K ++ +RR S + G A E+ Sbjct: 112 FTPEDLEKI----EKRMQELAKKDEPVSRR-VVSREEAAEYFRGIGEKYKAEIIESIPSS 166 Query: 82 EQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 +++ + + + + + L R G + Sbjct: 167 DEIKLYSHGGFTDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWAKKE 226 Query: 137 LSREHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 + + E D D + V + + +E Sbjct: 227 DQEAYLHMLEEAEKRDHRKLAKQLDLFHMQEESPGMVFWHPKGWTLWQQVEQYMRRRVNE 286 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEI 244 GY E+ P+++ +G + ++MF T + + + ++H + Sbjct: 287 AGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTESEK--RDYAIKPMNCPGHVQVFNHGL 344 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LPLR+ R+EA A G++R F + + E+ +E Sbjct: 345 RSYRDLPLRYAEFGSCHRNEASGALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNE 401 Query: 305 CAEEILKRLDL 315 A + K Sbjct: 402 LAMSVYKDFGF 412 >gi|312113796|ref|YP_004011392.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311218925|gb|ADP70293.1| threonyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 640 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 75/437 (17%), Positives = 125/437 (28%), Gaps = 71/437 (16%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IGQAIAEGNLSLVDALKNETS 78 R + + ++EK R +I + S + A EG + E Sbjct: 108 RAESFTPDDLAKIEEKMREIIAADKPFVKEVWSRAKAQDFFAAEGEGFKVELIDAIPEGQ 167 Query: 79 TLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q L+ S K+ + L +N L R G ++ Sbjct: 168 DLKIYRQGDWLDLCRGPHLPSTGKVGKAFKLMRLAGSYWRGDSNREQLQRIYGTAWASDE 227 Query: 137 LSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSE 189 + + + E D R + A SV + Sbjct: 228 QLKSYLTMLEEAEKRDHRRLGREMDLFHLQEEAPGSVFWHPKGWTVFQALIAFMRRRQHA 287 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEII 245 G+ EV++P ++ + +G KF ++MF T P + ++ + + Sbjct: 288 SGHVEVNSPDMMERKLWEQSGHWEKFGENMFVTETPDERVFCCKPMNCPGHIQIFKNGLK 347 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LPLR R E A G++R F + + E E + S Sbjct: 348 SYRDLPLRIAEFGKVHRYEPSGALH---GIMRVRHFTQDDAHIFCTPEQITEECVHLNSL 404 Query: 306 AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW--------------------LAGQN 345 I + V+ L T + EVW G+ Sbjct: 405 LLSIYRDFGFEDVVIKLSTR----PEKRVGSDEVWDKAEAALKAAVEAAGEPYTLNPGEG 460 Query: 346 LY----RE------ISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHT-------LN 383 + E I CG Q R+ + Y + HT L Sbjct: 461 AFYGPKLEYTLRDAIGREWQCGTIQLDFNLPVRLGAFYIGEDGAK----HTPVMIHRALF 516 Query: 384 GSGVAVGRCLIAILENY 400 GS R + ++ENY Sbjct: 517 GSL---ERFIGILIENY 530 >gi|325497120|gb|EGC94979.1| threonyl-tRNA synthetase [Escherichia fergusonii ECD227] Length = 652 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 92/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ + E+ + + Sbjct: 115 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFVKRGESYKVSILDENI 174 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 175 AHDDQPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 234 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 235 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRTK 294 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 295 LKEYQYQEVKGPFMMDRVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 354 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 355 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 411 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 412 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 444 >gi|240850680|ref|YP_002972080.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup] gi|240267803|gb|ACS51391.1| threonyl-tRNA synthetase [Bartonella grahamii as4aup] Length = 658 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 91/295 (30%), Gaps = 25/295 (8%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR---RNSNSAQIGQAIAEGNLSLVDALKNET 77 R + + +++K R +I++ + R R + + + L+D++ E Sbjct: 111 RQQPFTLDDLTIIEKKMREIIQRNKPFRKEIWSREKARKKFSEKKEFYKVELIDSI-PED 169 Query: 78 STLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 LK Q + S ++ + + + AN +L R G + Sbjct: 170 QDLKIYYQGDWFDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFANE 229 Query: 136 HLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTS 188 + + + + E D R + + + Sbjct: 230 NDLKAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGMIFWHKKGWKMFQNLINYMRRRLD 289 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPTSEVSL-TNL 239 +H Y EV+AP ++ +G + ++MF + + + Sbjct: 290 DHQYAEVNAPQVLDRSLWEISGHWGWYKENMFKVIPVAENSDHGNVYALKPMNCPGHVQI 349 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 + H + + LP+R R E + G++R F + + +E Sbjct: 350 FKHGLKSYRDLPIRLAEFGLVHRYEPSGSLH---GLMRVRGFTQDDAHIFCTDEQ 401 >gi|190575251|ref|YP_001973096.1| threonyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] gi|229558456|sp|B2FN79|SYT_STRMK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|190013173|emb|CAQ46806.1| putative threonyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] Length = 633 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 36/298 (12%), Positives = 85/298 (28%), Gaps = 38/298 (12%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQL--PILEKEEHEVCSSLKKL 101 + ++G+ IA+ +++ K K +L + E + ++ Sbjct: 119 AIEKRMGELIAQDYDVIKKMTPRAEVIEIFKARGEDYKLRLIEDMSEDIQAMGMYYHQEY 178 Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE--------------HFEIGEA 147 + + + + + + + + + + E Sbjct: 179 VDMCRGPHVPNTRFLKAFKLTRISGAYWRGDAQNEQLQRIYGTAWADKKQLEAYIKRIEE 238 Query: 148 LGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 + D R K A V + + + GY EV P + Sbjct: 239 AEMRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWALWQVVEQYMRKVYRNSGYGEVRCPQI 298 Query: 201 VRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTL 257 + +G + D+MF T + ++ +++ + + LP+R+ Sbjct: 299 LDVSLWKKSGHWDNYQDNMFFTESEKRTYAVKPMNCPGHIQVFNQGLHSYRDLPIRYGEF 358 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R+E A G+LR F + + E +E A + + Sbjct: 359 GSCHRNEPSGALH---GILRVRGFTQDDGHVFCTENQIESEVTAFHQQALAVYQHFGF 413 >gi|187929057|ref|YP_001899544.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J] gi|238691850|sp|B2UGJ8|SYT_RALPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187725947|gb|ACD27112.1| threonyl-tRNA synthetase [Ralstonia pickettii 12J] Length = 635 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 6/156 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 +V + + E+GY EV P ++ TG K+ ++MF T Sbjct: 260 PGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILDKTLWEKTGHWDKYRENMFIT 319 Query: 223 TDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + ++ +Y I + LPLRF R+E G++R Sbjct: 320 ESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRFGEFGACHRNEPSGGLH---GIMRVR 376 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E + +++ K Sbjct: 377 GFTQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDFGF 412 >gi|291165911|gb|EFE27958.1| threonine--tRNA ligase [Filifactor alocis ATCC 35896] Length = 655 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 114/364 (31%), Gaps = 44/364 (12%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ + L+ +KK I+ DEK I K E R I + + E N Sbjct: 112 REDLDTLEKEMKK---------IIKEDEK----ITKFELPREE------AI-KLMEEKNE 151 Query: 68 SLVDALKN---ETSTLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 L E + + +Q K I + +++ Sbjct: 152 PYKVELIQDLPEDAVISFYQQGEEFIDLCAGPHLMSTKGIKAYKLISSSMAYWRGDSDKA 211 Query: 123 ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAH 173 L R G + ++ E + D ++ + + G +L Sbjct: 212 QLQRIYGTAFNKKEELADYLVYLEEIKKRDHNKLGREMELFTTVDVIGQGLPLLLPKGTK 271 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-----CTTDGRWL 228 + L +++ DL E GY PL+ + + +G + + MF + Sbjct: 272 MVMKLQRWIEDLEDREWGYVRTKTPLMAKSDLYRISGHWDHYKEGMFVLGDEEVDKEVFA 331 Query: 229 IPTSEVSLTNL-YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 + Y + + LP R + FR+E + G+ R QF E Sbjct: 332 LRPMTCPFQYYVYKNTQKSYRDLPYRMGETSTLFRNEDSG---EMHGLTRVRQFTISEGH 388 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNL 346 ++ R + + E + L+ A +L L L V + D D W Q Sbjct: 389 NVVRPDQAEEELQNCLNLAVYVLTTLGLQDDVTFRLSKWDPNNREKYLGDESYWETTQEA 448 Query: 347 YREI 350 R I Sbjct: 449 LRNI 452 >gi|209695239|ref|YP_002263168.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] gi|208009191|emb|CAQ79445.1| threonyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] Length = 642 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 95/337 (28%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG----NLSLVDALKNETSTLKEQLPIL 87 +D ++ + ++ I R + Q I + + ET + + Sbjct: 105 DIDMEHSLTQDDLDKIEKRMKELAKTKYQVIKKNVSWQEARDAFDARGETYKIAILDENV 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K++ ++ I + + + + + + S + + + Sbjct: 165 SKDDRPGLYHHEEYIDMCRGPHVPNMSFCQNFKILSVAGAYWRGNSDNKMLQRIYGTAFQ 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V H + + Sbjct: 225 DKKLLKAHLIRLEEAAKRDHRKIGKHLDLFHMQQEAPGMVFWHHNGWTIFRELEVFVREK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +E+ Y EV PL++ +G K+A+ MF T + P + +++ Sbjct: 285 LTEYDYQEVKGPLMMERVLWERSGHWDKYAEAMFTTSSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E E + + Sbjct: 345 LKSYRDLPLRMAEFGACHRNEPSGALH---GIMRVRGFTQDDAHIFCTEAQVQDEVKSCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + VV L T + E+W Sbjct: 402 EMVYDTYTTFGFENIVVKLSTR----PEQRVGSDEMW 434 >gi|295096109|emb|CBK85199.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 622 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 231 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 290 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 291 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 350 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + ++ Sbjct: 351 H---GLMRVRGFTQDDAHIFCTEDQVREEVNACIRMVYDMYSTFGF 393 >gi|82543879|ref|YP_407826.1| threonyl-tRNA synthetase [Shigella boydii Sb227] gi|187734126|ref|YP_001880509.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|123769450|sp|Q321L0|SYT_SHIBS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689503|sp|B2U397|SYT_SHIB3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81245290|gb|ABB65998.1| threonine tRNA synthetase [Shigella boydii Sb227] gi|187431118|gb|ACD10392.1| threonyl-tRNA synthetase [Shigella boydii CDC 3083-94] Length = 642 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 105 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHAARETFANRGESYKVSILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 165 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 345 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 402 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 434 >gi|149926877|ref|ZP_01915136.1| threonyl-tRNA synthetase [Limnobacter sp. MED105] gi|149824429|gb|EDM83647.1| threonyl-tRNA synthetase [Limnobacter sp. MED105] Length = 635 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 63/201 (31%), Gaps = 14/201 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY E+ P ++ + +G Sbjct: 250 LDLFHMQDEAPGLVFWHPKGWALWQQVEQYMRKVYVDGGYQEIRCPQILDRKLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNLYSHEII-----ESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + E+ + LP+R+ R+E+ Sbjct: 310 DNYKENMFTTESEK--RDYALKPMNCPGHIEVFKSDLRSYRDLPMRYGEFGACHRNESSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + E+ E + A ++ + V L L Sbjct: 368 ALH---GIMRVRGFTQDDGHIFCTEDQVQEEVTKFNQVAMQVYADFGFNEINVKLA---L 421 Query: 328 GFSACKTYDLEVWLAGQNLYR 348 A D E W ++ R Sbjct: 422 RPEARLGTD-ETWDKAEDSLR 441 >gi|329113775|ref|ZP_08242547.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326696901|gb|EGE48570.1| Threonyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 640 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 97/328 (29%), Gaps = 56/328 (17%) Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 I +A + + ++ R+H +G + L F A +V Sbjct: 215 RIHGTACRDANELAAWEQRQEEAARRDHRRLGREMDLFHFQ-----PEAPGAVFWHPNGW 269 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIP 230 + Y E++ P ++ +G KF ++MF T L P Sbjct: 270 TLFQTLLAYLRARQQAENYVEINTPDIMDLSLWQASGHWEKFGENMFTTETEGRTYALKP 329 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + ++ H + + LPLR R E A G++R F + + Sbjct: 330 MNCPGGVQVFRHGLKSYRDLPLRMAEFGKVHRFEPSGALH---GLMRVRAFTQDDAHIFC 386 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR-- 348 E E +R+ I K + + + E+W ++ R Sbjct: 387 TPEQMEAETQRICHLVLSIYKDFGFNNVRIKFSDR----PEKRVGSDEIWDRSEDALRRG 442 Query: 349 -EISSCSTC----------------------GNFQS----------RRMNSRYRDPNSKS 375 E S S ++Q +R+++ Y + Sbjct: 443 VEASGLSYTRNPGEGAFYGPKLEFVLRDAIGRDWQCGTVQVDLNLPQRLDAHYVGADGDK 502 Query: 376 LKFT--H-TLNGSGVAVGRCLIAILENY 400 H L GS R + +LE++ Sbjct: 503 HPPVMLHRALFGSL---ERFIGILLEHH 527 >gi|309782526|ref|ZP_07677250.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA] gi|308918863|gb|EFP64536.1| threonine--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 580 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 6/156 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 +V + + E+GY EV P ++ TG K+ ++MF T Sbjct: 260 PGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILDKTLWEKTGHWDKYRENMFIT 319 Query: 223 TDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + ++ +Y I + LPLRF R+E G++R Sbjct: 320 ESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRFGEFGACHRNEPSGGLH---GIMRVR 376 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E + +++ K Sbjct: 377 GFTQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDFGF 412 >gi|315181382|gb|ADT88295.1| threonyl-tRNA synthetase [Vibrio furnissii NCTC 11218] Length = 642 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 96/352 (27%), Gaps = 43/352 (12%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTL 80 + E LS D+ IE I AR + Q + + D + Sbjct: 105 YDIDLEESLSQDD--------IEKIEARMKELAKTKYQVVKKKVSWQEARDTFEARQEPY 156 Query: 81 KEQLPILEKEEHEV--CSSLKKLISCIPNVPLEEV--------------PIGTSANENIL 124 K ++ + ++ I + + +N +L Sbjct: 157 KMEILDQNVARDDRPGLYHHEEYIDMCRGPHVPHMGFCQHFKLLNVAGAYWRGDSNNKML 216 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMI 183 R G + H E D + K + Sbjct: 217 QRIYGTAFHDKKALQAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFR 276 Query: 184 D------LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEV 234 D +E+GY EV PL++ +G K+AD MF T + P + Sbjct: 277 DLEVFIRHKLNEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENRDYAIKPMNCP 336 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +++ + + LPLR R+E + G++R F + + E+ Sbjct: 337 GHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH---GIMRVRGFTQDDAHIFCTEDQ 393 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 E + + V L T + E+W + Sbjct: 394 IQEEVTSCIKMVYDTYTTFGFDNIAVKLSTR----PEKRVGSDEIWDKSEEA 441 >gi|260770313|ref|ZP_05879246.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972] gi|260615651|gb|EEX40837.1| threonyl-tRNA synthetase [Vibrio furnissii CIP 102972] Length = 642 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 96/352 (27%), Gaps = 43/352 (12%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTL 80 + E LS D+ IE I AR + Q + + D + Sbjct: 105 YDIDLEESLSQDD--------IEKIEARMKELAKTKYQVVKKKVSWQEARDTFEARQEPY 156 Query: 81 KEQLPILEKEEHEV--CSSLKKLISCIPNVPLEEV--------------PIGTSANENIL 124 K ++ + ++ I + + +N +L Sbjct: 157 KMEILDQNVARDDRPGLYHHEEYIDMCRGPHVPHMGFCQHFKLLNVAGAYWRGDSNNKML 216 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMI 183 R G + H E D + K + Sbjct: 217 QRIYGTAFHDKKALQAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFR 276 Query: 184 D------LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEV 234 D +E+GY EV PL++ +G K+AD MF T + P + Sbjct: 277 DLEVFIRHKLNEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENRDYAIKPMNCP 336 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +++ + + LPLR R+E + G++R F + + E+ Sbjct: 337 GHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH---GIMRVRGFTQDDAHIFCTEDQ 393 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 E + + V L T + E+W + Sbjct: 394 IQEEVTSCIKMVYDTYTTFGFDNIAVKLSTR----PEKRVGSDEIWDKSEEA 441 >gi|253996955|ref|YP_003049019.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8] gi|253983634|gb|ACT48492.1| threonyl-tRNA synthetase [Methylotenera mobilis JLW8] Length = 635 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 49/162 (30%), Gaps = 6/162 (3%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + GY EV P ++ +G + Sbjct: 254 HMQDDAPGMVFWHPRGWSIWQEVEQYMRQMFKSFGYQEVRTPTVMDKTLWEKSGHWQNYR 313 Query: 217 DDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 D+MF T+ ++ ++++++ + LPLR R+E + Sbjct: 314 DNMFVTSSENREYAVKPMNCPGHVQIFNNQLHSYRDLPLRLAEFGSCHRNEPSGSLH--- 370 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + + Sbjct: 371 GLMRVRGFTQDDAHIFCTEDQIEAEVADFIQMLYKAYGDFGF 412 >gi|302878338|ref|YP_003846902.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2] gi|302581127|gb|ADL55138.1| threonyl-tRNA synthetase [Gallionella capsiferriformans ES-2] Length = 637 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D V + + EH Y EV P ++ +G Sbjct: 250 LDLFHMQETMPGMVFWHPKGWTLWQEIEQYMRAKFREHDYQEVRTPAIMDKTLWEKSGHW 309 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T + P + +Y+H + + LPLR R+E+ + Sbjct: 310 ENYRDNMFTTASENRDYAVKPMNCPGHVQIYNHGLHSYRDLPLRLAEFGSCHRNESSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E +E + E+ + Sbjct: 370 H---GLMRVRGFTQDDAHIFCTEAQVESEVSNFIVMLNEVYRDFGF 412 >gi|291521022|emb|CBK79315.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus catus GD/7] Length = 585 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 101/339 (29%), Gaps = 23/339 (6%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E I +++++ + + R+ S + + + + +D L N Sbjct: 58 EDIAAIEKEMKK--VAKSGKKIVRHEISKEEALEMFKDDEYKID-LINGLEDGNISCYTQ 114 Query: 88 EKEEHEVCSSLKKL---ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 + + +L R G H ++ Sbjct: 115 GDFTDLCRGPHVDNVKLCRHFKLLRHSGAYWKGDSKNKVLQRIYGVCFPTAEELEAHLQL 174 Query: 145 GEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 E D + K L G + + + L ++ + + GY V Sbjct: 175 LEEAKERDHRKIGKDMELFMVDDLVGRGLPMFLPKGYTIWQELENYIKEKE-RKLGYQHV 233 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIESKSLP 251 P + +G + ++MF + L P + +Y+++ + LP Sbjct: 234 MTPCVGTVNLYKTSGHWDHYKENMFPAMEVDDEAFVLRPMNCPHHMMIYANKRHSYRDLP 293 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 +R +A FR EA +G+ R F + + E E R++ + Sbjct: 294 IRIGEIAHDFRYEASG---TLKGIERGRHFCQNDAHLFVTPEQIKDEISRVVDLIFSTYE 350 Query: 312 RLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + L D A D E+W +N RE+ Sbjct: 351 DFGITDYRCVLSLRDPEDKAKYHDDDEMWNKAENALREV 389 >gi|261339515|ref|ZP_05967373.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] gi|288318328|gb|EFC57266.1| threonine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] Length = 622 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 231 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 290 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 291 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 350 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + ++ Sbjct: 351 H---GLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGF 393 >gi|206580341|ref|YP_002237974.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|288934884|ref|YP_003438943.1| threonyl-tRNA synthetase [Klebsiella variicola At-22] gi|290509026|ref|ZP_06548397.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55] gi|238065116|sp|B5XQC6|SYT_KLEP3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|206569399|gb|ACI11175.1| threonyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|288889593|gb|ADC57911.1| threonyl-tRNA synthetase [Klebsiella variicola At-22] gi|289778420|gb|EFD86417.1| threonyl-tRNA synthetase [Klebsiella sp. 1_1_55] Length = 642 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 311 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGF 413 >gi|293604689|ref|ZP_06687089.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553] gi|292816858|gb|EFF75939.1| threonine--tRNA ligase [Achromobacter piechaudii ATCC 43553] Length = 650 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 65/202 (32%), Gaps = 10/202 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A + + + + +GY EV AP ++ TG Sbjct: 253 RELDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRAIYNNNGYQEVKAPQILDISLWKKTG 312 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + ++ +++ + + LPLR+ R+E Sbjct: 313 HWDNYRENMFTTESENRVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSG 372 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 + GM+R F + + EE E + +++ + + + T Sbjct: 373 SLH---GMMRVRGFTQDDGHIFCTEEQLQDECADFTALLQKVYRDFGFTEVLYKVATR-- 427 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 + EVW + E Sbjct: 428 --PEKRIGSDEVWDTAEQALME 447 >gi|126698152|ref|YP_001087049.1| threonyl-tRNA synthetase [Clostridium difficile 630] gi|254974173|ref|ZP_05270645.1| threonyl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255091574|ref|ZP_05321052.1| threonyl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255099679|ref|ZP_05328656.1| threonyl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255313300|ref|ZP_05354883.1| threonyl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255515991|ref|ZP_05383667.1| threonyl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255649082|ref|ZP_05395984.1| threonyl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|306519197|ref|ZP_07405544.1| threonyl-tRNA synthetase [Clostridium difficile QCD-32g58] gi|123066930|sp|Q189B8|SYT_CLOD6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115249589|emb|CAJ67406.1| Threonyl-tRNA synthetase [Clostridium difficile] Length = 639 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 105/350 (30%), Gaps = 45/350 (12%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG----NLSLVDALKNETSTLKEQLPIL 87 +D +R++ + +E I A + + E ++ +K + K +L Sbjct: 105 DIDLDHRLVPEDLEKIEAEMKKIAKE--DLKIERFELPRNEALELMKEQGEDYKVELISD 162 Query: 88 EKEEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKP 132 E + + + + P N +L R G Sbjct: 163 LPESEIISFYKQGDFTDLCRGPHLPSTKKVKAVKLQSVAGAYWRGDENNKMLQRIYGTSF 222 Query: 133 SAIHLSREHFEIGEALGLMD----------FDRATKLSGARFSVLTGHLAHLERALGQFM 182 E+ + E D F + G + G E Sbjct: 223 EKNKDLEEYLHLLEEAKKRDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWRE 282 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNL 239 I GY E+ +P+++ + +G + ++M+ + + P + Sbjct: 283 IHRKA---GYIEIESPIILNRKLWETSGHWYHYKENMYTVKIDDEDYAIKPMNCPGGLIY 339 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ ++ + P+R L R E A + G++R F + + E E Sbjct: 340 YNSQLHSYRDFPMRVAELGRVHRHELSGALQ---GLMRVRAFTQDDSHIFMLPEQIKDEI 396 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + + + I K Y + + D E W A +N RE Sbjct: 397 KGVANLIDGIYKTFGFEYNLELSTRPE----NSMGSD-EEWEAAENGLRE 441 >gi|160935092|ref|ZP_02082478.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753] gi|156866545|gb|EDO59917.1| hypothetical protein CLOLEP_03968 [Clostridium leptum DSM 753] Length = 660 Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 119/354 (33%), Gaps = 35/354 (9%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETST 79 R+L P + + +++ + + +IK+ E + R + + + E L E S Sbjct: 124 RNLTP--DDLTAIESEMKKIIKEDEPL--ERFELEPEEAVKLMKEKGQPYKVELIQEHSG 179 Query: 80 LKEQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E++ + + + + + +L R G Sbjct: 180 KGEKISFYRQGDFVDLCAGPHLMSTGKVKAVKLTSCTGAYWRGDSKSKMLQRVYGISFPK 239 Query: 135 IHLSREHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDL 185 H E E D ++ + + G +L + A + + L +F+ D Sbjct: 240 ASELTAHLEAMEEAKKRDHNKLGRELGYFTTCDIIGQGLPILLPNGARVIQLLQRFVEDE 299 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT-SEVSLTNLYSHEI 244 + G+ P + + + +G + D MF D + +T + ++ Sbjct: 300 E-QKRGWLLTKTPYMAKSDLYKLSGHWDHYKDGMFVLGDEEKDDEVFALRPMTCPFQYQA 358 Query: 245 I-----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + LPLR+ + FR+EA + G++R QF E + R + E Sbjct: 359 YLNKKRSYRDLPLRYNETSTLFRNEASG---EMHGLIRVRQFTISEGHLMCRPDQLEEEF 415 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSC 353 + L A +L+ L L V FS D + ++ + E S Sbjct: 416 KSCLQLANYMLETLGLAEDVSYR------FSQWDPEDKDKYIGTPEQWDEAQSA 463 >gi|238895235|ref|YP_002919970.1| threonyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|238547552|dbj|BAH63903.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 642 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 311 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGF 413 >gi|241663242|ref|YP_002981602.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D] gi|240865269|gb|ACS62930.1| threonyl-tRNA synthetase [Ralstonia pickettii 12D] Length = 635 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 6/156 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 +V + + E+GY EV P ++ TG K+ ++MF T Sbjct: 260 PGTVFWHPKGWTLWQEIEQYMRRVYRENGYQEVKGPQILDKTLWEKTGHWDKYRENMFIT 319 Query: 223 TDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + ++ +Y I + LPLRF R+E G++R Sbjct: 320 ESEKREYALKPMNCPGHILIYKQGIKSYRDLPLRFGEFGACHRNEPSGGLH---GIMRVR 376 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E + +++ K Sbjct: 377 GFTQDDGHIFCTEDMIQAEVTAFTTLLQKVYKDFGF 412 >gi|78066086|ref|YP_368855.1| threonyl-tRNA synthetase [Burkholderia sp. 383] gi|123756187|sp|Q39H55|SYT_BURS3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77966831|gb|ABB08211.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia sp. 383] Length = 635 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 56/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + E+ +E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDHI 415 >gi|317047868|ref|YP_004115516.1| threonyl-tRNA synthetase [Pantoea sp. At-9b] gi|316949485|gb|ADU68960.1| threonyl-tRNA synthetase [Pantoea sp. At-9b] Length = 642 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 36/321 (11%), Positives = 86/321 (26%), Gaps = 39/321 (12%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETS 78 + ++ L + IE + R + + I + ++ V A + E+ Sbjct: 104 YDVDLDHTL--------TQEDIEQLEKRMHQLAETNYDVIKKKVSWQEARDVFAARGESY 155 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 + ++ ++ I + + + + + S + Sbjct: 156 KTTILDENISHDDRPGLYHHEEYIDMCRGPHVPNMRFCHHFKLQKISGAYWRGDSNNKML 215 Query: 139 REHFEIGEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERA 177 + + A D A V + Sbjct: 216 QRIYGTAWADKKQLAAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFR 275 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEV 234 + + E+ Y EV P ++ TG + + MF T + P + Sbjct: 276 ELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKEAMFTTSSENREYCIKPMNCP 335 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +++ + + LPLR R+E + G++R F + + E+ Sbjct: 336 GHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEDQ 392 Query: 295 SFTEHERMLSCAEEILKRLDL 315 E + ++ Sbjct: 393 VRDEVNSCIRMVYDMYSTFGF 413 >gi|218886086|ref|YP_002435407.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226701453|sp|B8DPN2|SYT_DESVM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|218757040|gb|ACL07939.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 644 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 7/191 (3%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + L L F+ H + GY V P L+R E Sbjct: 247 QQLDLFAFHEDVAPGMVYWHPKGMLLRTILEDFLRKEHL-KRGYELVQGPQLLRREVWEK 305 Query: 209 TGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 +G + ++M+ T + + P + VS +Y + + LP R L R E Sbjct: 306 SGHYDNYRENMYFTVIDDNAYGVKPMNCVSHMLIYKSHLRSYRDLPRRMFELGVVHRHEK 365 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 G+LR QF + + + R + E +++ +++ YR+V Sbjct: 366 SGVLH---GLLRVRQFTQDDAHILCRPDQLEAEIIGVIALVRDLMGLFGFDYRIVISTRP 422 Query: 326 DLGFSACKTYD 336 + + + +D Sbjct: 423 EKSIGSDEDWD 433 >gi|119472992|ref|ZP_01614827.1| threonyl-tRNA synthetase [Alteromonadales bacterium TW-7] gi|119444612|gb|EAW25923.1| threonyl-tRNA synthetase [Alteromonadales bacterium TW-7] Length = 586 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 61/183 (33%), Gaps = 10/183 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+ Y EV P+++ +G K++D MF Sbjct: 259 EAPGMVFWHNDGWSIYRELEEFVREKLREYSYEEVKGPMMMDRSLWEKSGHWEKYSDAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LPLR R+E A G++R Sbjct: 319 TTESEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALH---GLMR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + EE E + + + VV L T + D Sbjct: 376 VRGFTQDDAHVFCTEEQVMDEVSACIKMVYDTYETFGFDKIVVKLSTR----PEKRIGDD 431 Query: 338 EVW 340 E+W Sbjct: 432 EIW 434 >gi|88706032|ref|ZP_01103740.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71] gi|88699746|gb|EAQ96857.1| threonyl-tRNA synthetase [Congregibacter litoralis KT71] Length = 645 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 58/208 (27%), Gaps = 6/208 (2%) Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + + +H E + D A V Sbjct: 208 DANNEMLQRVYGTAWANKKQLKQYLHRIEEAEKRDHRKIGKKLDLFHTQEEAPGMVFWHP 267 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 + + + +GY E+ P LV +G KF DDMF Sbjct: 268 QGWTIYQVIEQYMREQQRANGYQEIKTPQLVDMSLWEKSGHADKFGDDMFMLQADEREFA 327 Query: 231 TSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 ++ +++ + + LPLR R+E + G++R F + + Sbjct: 328 VKPMNCPCHVQVFNQGLRSYRDLPLRLAEFGSCHRNEPSGSLH---GIMRVRGFTQDDGH 384 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDL 315 EE +E + + + Sbjct: 385 IFCTEEQIQSEVSTFIDFLHAVYRDFGF 412 >gi|206559848|ref|YP_002230612.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315] gi|238693072|sp|B4E7I6|SYT_BURCJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|198035889|emb|CAR51780.1| threonyl-tRNA synthetase [Burkholderia cenocepacia J2315] Length = 635 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 56/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + E+ +E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDHI 415 >gi|162218055|ref|YP_620875.2| threonyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|162227933|ref|YP_835120.2| threonyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|254245609|ref|ZP_04938930.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia PC184] gi|124870385|gb|EAY62101.1| Threonyl-tRNA synthetase, class IIa [Burkholderia cenocepacia PC184] Length = 635 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 56/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + E+ +E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDHI 415 >gi|109898814|ref|YP_662069.1| threonyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] gi|109701095|gb|ABG41015.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] Length = 638 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 70/203 (34%), Gaps = 11/203 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+ Y EV APL++ +G K+A++MF Sbjct: 259 EAPGMVFWHNDGWSIYTELEKFVRSKLREYEYDEVKAPLMMDRSLWEKSGHWDKYAENMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 TT + ++ +++ + + LPLR R+E A G++R Sbjct: 319 TTTSEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALH---GLMR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + ++ E + EI K V L T + Sbjct: 376 VRGFTQDDAHIFCTDDQILAEVGGCIDSVYEIYKIFGFENISVKLSTR----PEKRVGSD 431 Query: 338 EVWLAGQNLYREISSCSTCGNFQ 360 EVW + E + S +FQ Sbjct: 432 EVWDKAEKELAE-ALTSKGIDFQ 453 >gi|317403269|gb|EFV83787.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans C54] Length = 650 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 65/202 (32%), Gaps = 10/202 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A + + + ++GY EV AP ++ TG Sbjct: 253 RELDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRSVYRDNGYQEVKAPQILDISLWKKTG 312 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + ++ +++ + + LPLR+ R+E Sbjct: 313 HWDNYRENMFTTESENRVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSG 372 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 + GM+R F + + EE E + +++ + + + T Sbjct: 373 SLH---GMMRVRGFTQDDGHIFCTEEQLQDECADFTALLQKVYRDFGFTEVLYKVATR-- 427 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 + EVW + E Sbjct: 428 --PEKRIGSDEVWDTAEQALME 447 >gi|213161901|ref|ZP_03347611.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 530 Score = 56.7 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 139 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 198 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 199 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 258 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ VV L T Sbjct: 259 H---GLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMVYDMYSTFGFEKIVVKLSTR---- 311 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 312 PDKRIGSDEMW 322 >gi|152970729|ref|YP_001335838.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330009686|ref|ZP_08306560.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3] gi|150955578|gb|ABR77608.1| threonyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328534774|gb|EGF61330.1| threonine--tRNA ligase [Klebsiella sp. MS 92-3] Length = 622 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 231 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 290 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 291 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 350 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + ++ Sbjct: 351 H---GLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGF 393 >gi|221066194|ref|ZP_03542299.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1] gi|220711217|gb|EED66585.1| threonyl-tRNA synthetase [Comamonas testosteroni KF-1] Length = 639 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 65/202 (32%), Gaps = 14/202 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV AP ++ TG K+ ++MF Sbjct: 258 HSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILDKGLWEKTGHWDKYRENMF 317 Query: 221 CTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + + ++ I + LPLRF R+E + G+ Sbjct: 318 TTDSEK--REYALKPMNCPGHIIIFKQGIKSYRDLPLRFGEFGNCHRNEPTGSLH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 +R F + + E+ E S +++ + L T + Sbjct: 373 MRVRAFTQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFTNILYRLSTR----PEKRIG 428 Query: 336 DLEVWLAGQNLYREISSCSTCG 357 E W +N E S C Sbjct: 429 TDEAWDKAENALAEGLRASGCE 450 >gi|299533556|ref|ZP_07046932.1| threonyl-tRNA synthetase [Comamonas testosteroni S44] gi|298718462|gb|EFI59443.1| threonyl-tRNA synthetase [Comamonas testosteroni S44] Length = 639 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 65/202 (32%), Gaps = 14/202 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV AP ++ TG K+ ++MF Sbjct: 258 HSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILDKGLWEKTGHWDKYRENMF 317 Query: 221 CTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + + ++ I + LPLRF R+E + G+ Sbjct: 318 TTDSEK--REYALKPMNCPGHIIIFKQGIKSYRDLPLRFGEFGNCHRNEPTGSLH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 +R F + + E+ E S +++ + L T + Sbjct: 373 MRVRAFTQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFTNILYRLSTR----PEKRIG 428 Query: 336 DLEVWLAGQNLYREISSCSTCG 357 E W +N E S C Sbjct: 429 TDEAWDKAENALAEGLRASGCE 450 >gi|254785570|ref|YP_003072999.1| threonyl-tRNA synthetase [Teredinibacter turnerae T7901] gi|259516754|sp|C5BSQ1|SYT_TERTT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|237684404|gb|ACR11668.1| threonine--tRNA ligase [Teredinibacter turnerae T7901] Length = 637 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 62/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 FD A V + + E+GY E+ P +V +G Sbjct: 250 FDLFHLQEEAPGMVFWHPKGWSVYTAIEQYMRKVQRENGYKEIKTPQVVDRSLWERSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF D MF + + +++ + + LPLRF R+EA Sbjct: 310 DKFRDGMFTVESESRDYAVKPMNCPCHIQVFNQGLKSYRDLPLRFAEFGSCHRNEASG-- 367 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 +G++R F + + E+ +E E+ + ++ L T Sbjct: 368 -TLQGIMRVRAFTQDDGHIFCAEDAIQSEVSIFTDLLYEVYRDFGFEDVIIRLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 + EVW + Sbjct: 423 PEQRVGSEEVWDKSEKA 439 >gi|167587363|ref|ZP_02379751.1| threonyl-tRNA synthetase [Burkholderia ubonensis Bu] Length = 635 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 56/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + E+ +E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDHI 415 >gi|320173198|gb|EFW48409.1| Threonyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112] gi|320185858|gb|EFW60609.1| Threonyl-tRNA synthetase [Shigella flexneri CDC 796-83] gi|332096305|gb|EGJ01306.1| threonyl-tRNA synthetase [Shigella boydii 3594-74] Length = 622 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 93/337 (27%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + +E + R + + + I + ++ A + E+ + + Sbjct: 85 DVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHAARETFANRGESYKVSILDENI 144 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ ++ + + + + + S + + + A Sbjct: 145 AHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWA 204 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 205 DKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSK 264 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 265 LKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQG 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + EE E + Sbjct: 325 LKSYRDLPLRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCI 381 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ VV L T + E+W Sbjct: 382 RLVYDMYSTFGFEKIVVKLSTR----PEKRIGSDEMW 414 >gi|146276901|ref|YP_001167060.1| threonyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] gi|166225490|sp|A4WQU1|SYT_RHOS5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145555142|gb|ABP69755.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodobacter sphaeroides ATCC 17025] Length = 646 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 51/434 (11%), Positives = 121/434 (27%), Gaps = 57/434 (13%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++++ + +I + +R I A G V+ ++ + Sbjct: 110 DREETFTPEDLGAIEKRMKEIINARDAVRTETWDRDRAIAHYEARGENFKVELVQAIPAD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPL------------EEVPIGTSANENILIRS 127 + ++ + + +P + + ++ Sbjct: 170 QQIRMYWHGNWQDLCRGPHLQHTGQVPADAFQLMSVAGAYWRGDSNNKQLQRIYGVAFKT 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 + + +H+ E + + + A V + + Sbjct: 230 RDELKAYLHMLEEAAKRDHRKLGKEMELFHLQEEAPGMVFWHPNGWQIYRTLEDYMRGRL 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHE 243 + GY E+ P +V + +G + ++MF + + + + Sbjct: 290 RKAGYKEIRTPQVVDRKLWEASGHWEAYKENMFLVEVEEEHAKEKRINALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + LPLR R E+ G++R F + + E+ E Sbjct: 350 VYNQGLKSYRDLPLRLAEFGSCHRYESSG---SMHGLMRVRGFVQDDAHIFCTEDQIEGE 406 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCT----------------GDLGFSACKTYDLEVWLA 342 + + K L + L T L + K Sbjct: 407 CAAFIELLSSVYKDLGFDSFEIKLSTRPEVRIGSDEAWDKVETALENAIKKVGAAYEIDP 466 Query: 343 GQNLYR----------EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLNGSGV 387 G+ + I CG FQ R+ + Y + + + L+ + + Sbjct: 467 GEGAFYGPKLDFKLTDAIGRKWQCGTFQVDPNLPTRLGAEYIGEDGAKHR-PYMLHRAIL 525 Query: 388 AV-GRCLIAILENY 400 R + ++ENY Sbjct: 526 GSFERFIGILIENY 539 >gi|255280775|ref|ZP_05345330.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255268712|gb|EET61917.1| threonine--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 642 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 99/337 (29%), Gaps = 44/337 (13%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ---IGQAIAEGNLSLVDALKNETST 79 + S+ L+ ++ +E I A + I + + K + Sbjct: 103 YDIDSDTPLTAED--------LEKIEAEMKKIVKEALPI-TRFTKPRDEAIAYFKEKNEP 153 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 K +L E+ E+ + + P A + + + S + Sbjct: 154 YKVELIEDLPEDAEISFYQQGEFVDLCAGPHLMSTKPVKAFKLTSLAGAYWRGSEKNKML 213 Query: 140 EHFEIGEALGLMDFDRATKLSG-----------------------ARFSVLTGHLAHLER 176 D + F + ++ Sbjct: 214 TRIYGTSFTKKADLEAYITRMEEAKKRDHRKLGKQLGLFMMRDEGPGFPFFLPNGMIVKN 273 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSE 233 AL + ++H + GY E+S P+++ + +G + ++M+ T + P + Sbjct: 274 ALLDYWREIH-RKAGYVEISTPIMLNRQLWETSGHWDHYRENMYTTVIDDTDFAIKPMNC 332 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 +Y E + LPLR + R E G++R F + + E Sbjct: 333 PGGILVYQSEPRSYRDLPLRMGEIGLVHRHEKSG---QLHGLMRVRCFNQDDAHIFMTPE 389 Query: 294 DSFTEHERMLSCAEEILK--RLDLHYRVVSLCTGDLG 328 E + ++ +E+ + H + + +G Sbjct: 390 QICDEIKGVVKLIDEVYQLFGFKYHVELSTRPENSMG 426 >gi|33862697|ref|NP_894257.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] gi|73919817|sp|Q7V8D2|SYT_PROMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33634613|emb|CAE20599.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9313] Length = 640 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 109/350 (31%), Gaps = 37/350 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 ++ E ++ +K ++ LD + I E+ R + + + Sbjct: 115 KDLEAIEARMK---------ELVKLDYDVNVEIVSKEEAR-------KEFEKRCEPYKIE 158 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSS--LKKLISCIPNVPLEEVPIGTSANENILIR 126 +VD + + + + E + + + + + +N+ +L R Sbjct: 159 IVDEIPE--NEIIKLYRHQEYTDMCRGPHVPNTRHLRTFKLMKVSGAYWRGDSNKTMLQR 216 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALG 179 G + + + + E D R K A + + Sbjct: 217 IYGTAWGSSKELKAYLKRLEEAEKRDHRRIAKQMSLFHTQEEAPGMIFWHAKGWAIYQVL 276 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSL- 236 + I S H Y E+ P +V +G KF DDMF TT + + I Sbjct: 277 EQYIRETLSLHDYQEIRTPQVVDRSLWEKSGHWEKFKDDMFTTTSENREYAIKPMNCPCH 336 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +++ + + LP+R R+E + G++R F + + E Sbjct: 337 VQIFNQGLKSYRDLPIRLAEFGSCLRNEPSGSLH---GLMRVRNFVQDDAHIFCTELQVQ 393 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 E + + E+ + ++ L T + E+W + Sbjct: 394 EEVSKFIDLVFEVYRSFGFDSVLIKLSTR----PEKRVGSDEIWDKSEKA 439 >gi|85709956|ref|ZP_01041021.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1] gi|85688666|gb|EAQ28670.1| threonyl-tRNA synthetase [Erythrobacter sp. NAP1] Length = 671 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 103/352 (29%), Gaps = 44/352 (12%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 + + +++EK R +IK + +R S I + +EG + K E Sbjct: 117 EPFSMDDLPAIEEKMREIIKADKPLRREVWSRQQLIDKWESEGESFKAEWAKELPE--NE 174 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL----------------IR 126 +L + + + + Sbjct: 175 ELTVY-WSGDDWLDMCRGPHLASTGKLDPQAFKLMRVAGAYWRGDQRNAQLTRIYGTGWL 233 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 + + + +H E + + D A SV + + + Sbjct: 234 NKKQLNAHLHRLEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPKGYRIWRELEAYMRRK 293 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------------------- 224 GY E+ P L+ +G K+A++MF D Sbjct: 294 MDGGGYREIKTPQLMDVRQWTQSGHWGKYAENMFAVPDIVPDVDDSGEAEASPKVADDAD 353 Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + P + + ++ I + LP+R + R+E A G++R QF + Sbjct: 354 WMAIKPMNCPAHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALH---GLMRVRQFTQD 410 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 + E+ E + + A+ + + Y V + F + + +D Sbjct: 411 DAHIFCTEDQVVEEVRKFCALADSVYRDFGFSYHVKLALRPEKRFGSEEDWD 462 >gi|134295547|ref|YP_001119282.1| threonyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|166223329|sp|A4JDU4|SYT_BURVG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|134138704|gb|ABO54447.1| Ser-tRNA(Thr) hydrolase [Burkholderia vietnamiensis G4] Length = 635 Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 55/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + ++ GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNDAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + E+ E + A + K + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFIAESIAFNTLAMSVYKDFGFEHI 415 >gi|209516675|ref|ZP_03265528.1| threonyl-tRNA synthetase [Burkholderia sp. H160] gi|209502950|gb|EEA02953.1| threonyl-tRNA synthetase [Burkholderia sp. H160] Length = 635 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 14/202 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + ++ GY E+ PL++ +G Sbjct: 250 LDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNDAGYLEIKTPLIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + ++H + + LPLR+ R+E+ Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + E+ +E + A + + + L L Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYRDFGFDNVEIKLS---L 421 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 A D E W + RE Sbjct: 422 RPDARAGTD-ETWDRAEQGLRE 442 >gi|105892737|gb|ABF75902.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia cenocepacia AU 1054] gi|116647586|gb|ABK08227.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Burkholderia cenocepacia HI2424] Length = 618 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 56/171 (32%), Gaps = 10/171 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 233 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 292 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 293 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 350 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 A G++R F + + E+ +E + A + K + Sbjct: 351 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGFDHI 398 >gi|163740958|ref|ZP_02148351.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] gi|161385949|gb|EDQ10325.1| threonyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] Length = 648 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 66/223 (29%), Gaps = 12/223 (5%) Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + K + +H+ E + + + A + Sbjct: 213 DSDRAMLQRIYGVAFTGKEKLKAHLHMLEEAAKRDHRKLGREMNLFHMQEEAPGQIFWHP 272 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGR 226 Q + GY EV+ P +V + +G K+ ++MF R Sbjct: 273 NGWKIYTTLQDYMRRMQDRDGYVEVNTPQVVDRKLWEASGHWDKYQENMFIVEVDEDHAR 332 Query: 227 WLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + + ++ + LPLR R E A G++R F Sbjct: 333 EKAVNALKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCARYEPSGALH---GIMRVRGF 389 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 + + E+ +E + ++ ++ L H + L T Sbjct: 390 TQDDGHIFCAEDQIESETAKFIAFLSKVYADLGFHDWTIKLST 432 >gi|90417311|ref|ZP_01225237.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] gi|90330896|gb|EAS46159.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] Length = 642 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A S+ + + + E GY E+ P +V +G Sbjct: 250 LDLYHMQEEAPGSIFWHPKGWSVYSAIEEYMRNKQREQGYQEIKTPQIVDMSLWEKSGHA 309 Query: 213 PKFADDMF--CTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DDMF T D + + +++ + + LPLR R+E + Sbjct: 310 DKFGDDMFSLQTDDRNYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + + E+ Sbjct: 370 H---GIMRVRSFTQDDAHIFCTEEQIQPEVSQFIDFLHEVYADFGF 412 >gi|51245280|ref|YP_065164.1| threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|50876317|emb|CAG36157.1| probable threonyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 657 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 53/165 (32%), Gaps = 8/165 (4%) Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 G + A + + +F H H Y + P + R + +G + Sbjct: 272 TMQDSIGPGLPLWLPKGARMRHQIEEFWKAEH-YRHDYELLYTPHIARQDLWKTSGHLDF 330 Query: 215 FADDMFCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 +AD M+ D + + + + + PLR+ L +R E A Sbjct: 331 YADSMYAGMDIDGVTYQIKPMNCPFHVGVYKAKKRSYRDFPLRWCELGTVYRYERAGALH 390 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + R E E +L ILK Sbjct: 391 ---GLMRVRSFTQDDAHIFCRPEQLEDEIFNILDFNLFILKSFGF 432 >gi|86134203|ref|ZP_01052785.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152] gi|85821066|gb|EAQ42213.1| Threonyl-tRNA synthetase [Polaribacter sp. MED152] Length = 647 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 52/174 (29%), Gaps = 9/174 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 Q + + GY V P + + E +G K+ +D F + + Sbjct: 277 LQNFLKAAQKKAGYEMVMTPHIGQKELYVTSGHYEKYGEDSFQAIKTPKMDEEFLLKPMN 336 Query: 238 NLYS-----HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + + K LP RF +R E + G+ R F + + Sbjct: 337 CPHHCEVYNFKPYSYKDLPKRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCTP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 E E + ++ + L + D+ D+E W +N Sbjct: 394 EQLDQEFKEVIDLVLYVFGSLGFEDFTAQVSIRDMENLDKYIGDVETWEIAENA 447 >gi|326792022|ref|YP_004309843.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326542786|gb|ADZ84645.1| threonyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 657 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 103/351 (29%), Gaps = 35/351 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ-IGQAIAEGNLSLVDALKNETST-----LKEQLP 85 D + + E I A + + E L E L +LP Sbjct: 105 DFDTERHFVEADFEKIEAEMKKIVKEKLPIERFELPREEAIKLMEEAEEPYKVELIRELP 164 Query: 86 ILEKEEHEVCSSLKKLI---SCIPNVPLEEVPI-----------GTSANENILIRSVGKK 131 EK L + P+E I + + + K Sbjct: 165 EGEKITFYKQGDFVDLCAGPHLMSTKPVEAFKILSAAGAYWKGNEKNKMLARIYATAFTK 224 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER-----ALGQFMIDLH 186 + + E E + R KL V G + + Q ++ Sbjct: 225 KADLAAHLEALEEAKKRDHNKLGRELKLFTTDEKVGQGLPLLMPKGARIVQTLQRFVEDE 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT-SEVSLTNL-----Y 240 + GY PL+ + + +G + D MF D + +T Y Sbjct: 285 EEKRGYVLTKTPLMAKSDLYKMSGHWDHYKDGMFVLGDEEKDKEVFALRPMTCPFQFTVY 344 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + E + LP+R+ + FR+E+ + G++R QF E + E E Sbjct: 345 NAEQHSYRDLPIRYGETSTLFRNESSG---EMHGLIRVRQFTISEGHLVCTPEQLEDEFR 401 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 ++ ++ L + + + D + D E W + L R I Sbjct: 402 GVIELINYMMATLGIENDISYRFSKWDPANTGKYINDPEAWERTEGLMRNI 452 >gi|262044121|ref|ZP_06017196.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038520|gb|EEW39716.1| threonine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 622 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 231 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 290 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 291 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 350 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + ++ Sbjct: 351 H---GLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGF 393 >gi|257459979|ref|ZP_05625083.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268] gi|257442420|gb|EEV17559.1| threonyl-tRNA synthetase [Campylobacter gracilis RM3268] Length = 607 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 91/333 (27%), Gaps = 25/333 (7%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + E + ++++K R L E + S + A N L + Sbjct: 83 GEKLGEEDLKAIEKKMRAL---AEANLEIKKIASTKEAVAKKYANDDLKQEVLKRIPEGP 139 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP------IGTSANENILIRSVGKKPSAI 135 L + E + + N L + + V ++ Sbjct: 140 VSLYAQGEFEDICRGPHVQNTKFLKNFALTRIAGAYLGGDEKREMLTRIYGVVFADKDSL 199 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID-----LHTSEH 190 E + K + G L + + Sbjct: 200 KKHLTMLEEAKKRDHRKLGTEMKFFTFDEQIGAGLPIWLPAGTRMRIKLEGRLYRQLRKR 259 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIES 247 GY V P +++ +A +G + ++M+ TT + P + V +Y EI Sbjct: 260 GYEPVRGPEILKSDAWKISGHYSNYKENMYFTTIEEQEYGIKPMNCVGHIKVYQSEIRSY 319 Query: 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAE 307 + LPL+F R E G+ R +F + + +L E Sbjct: 320 RDLPLKFCEYGVVHRHEKSGVLH---GLFRVREFTQDDAHLFVMPSQIKENVYEILDFVE 376 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++K Y + D EVW Sbjct: 377 LLMKAFGFEYELEISTK-----PQKAVGDDEVW 404 >gi|33240514|ref|NP_875456.1| threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|73919816|sp|Q7VBM8|SYT_PROMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33238042|gb|AAQ00109.1| Threonyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 643 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 104/338 (30%), Gaps = 26/338 (7%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETSTLKEQ 83 + + ++ + + LIK+ D+ S + + + + + + +E E Sbjct: 112 FSLDDLNQIELRIKELIKQDYDVVVE--EVSKEKARKTFLDRDEAYKVQIIDEIPD-NET 168 Query: 84 LPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 + + + +E+ K + + + +N +L R G + Sbjct: 169 IKLYKHQEYIDMCRGPHVPNTKHLRAFSLMKVSGAYWRGDSNNEMLQRIYGTAWGSTKEL 228 Query: 139 REHFEIGEALGLMDFDRATK-------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + E D + K A + + + I + Sbjct: 229 EAYLLKIEEAEKRDHRKIGKKLDLFHTQEEAPGMIFWHPKGWSIYQVLESFIRETLILND 288 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--DGRWLIPTSEVSL-TNLYSHEIIESK 248 Y E+ P V +G KF +DMF TT + + I +++ + + Sbjct: 289 YKEIKTPQTVDRSLWEKSGHWDKFKEDMFTTTSENREYAIKPMNCPCHIQVFNEGLKSYR 348 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LP+R R+E A G++R F + + E E + + + Sbjct: 349 DLPIRLAEFGSCHRNEPSGALH---GLMRVRNFVQDDAHIFCTEAQIQDEVSKFIDLVFD 405 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + K ++ L T + E+W + Sbjct: 406 VYKAFGFESIIIKLSTR----PTKRVGSDEIWDKSEKA 439 >gi|197284912|ref|YP_002150784.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227355315|ref|ZP_03839716.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906] gi|238693141|sp|B4ETK6|SYT_PROMH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194682399|emb|CAR42252.1| threonyl-tRNA synthetase [Proteus mirabilis HI4320] gi|227164539|gb|EEI49410.1| threonyl-tRNA synthetase [Proteus mirabilis ATCC 29906] Length = 642 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMAFWHNDGWTIFRELETFVRCKLKEYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T + P + ++ + + LPLR R+E A Sbjct: 311 ENYKENMFTTSSENREYCIKPMNCPGHVQIFKQGLRSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE +E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQILSEVNNCIKLIYDVYSTFGF 413 >gi|167582118|ref|ZP_02374992.1| threonyl-tRNA synthetase [Burkholderia thailandensis TXDOH] Length = 635 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + GY E+ P+++ +G Sbjct: 250 LDLFHIQEEAPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E+ +E A + + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGF 412 >gi|53719558|ref|YP_108544.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|53725296|ref|YP_102787.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|76810857|ref|YP_333290.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121600801|ref|YP_992866.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124385818|ref|YP_001026205.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10229] gi|126441516|ref|YP_001058752.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 668] gi|126449349|ref|YP_001080524.1| threonyl-tRNA synthetase [Burkholderia mallei NCTC 10247] gi|126453502|ref|YP_001066005.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|134282197|ref|ZP_01768902.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|167003090|ref|ZP_02268880.1| threonine--tRNA ligase [Burkholderia mallei PRL-20] gi|167719848|ref|ZP_02403084.1| threonyl-tRNA synthetase [Burkholderia pseudomallei DM98] gi|167738851|ref|ZP_02411625.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 14] gi|167816071|ref|ZP_02447751.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 91] gi|167824445|ref|ZP_02455916.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 9] gi|167845979|ref|ZP_02471487.1| threonyl-tRNA synthetase [Burkholderia pseudomallei B7210] gi|167894556|ref|ZP_02481958.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 7894] gi|167902959|ref|ZP_02490164.1| threonyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] gi|167911196|ref|ZP_02498287.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 112] gi|167919220|ref|ZP_02506311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei BCC215] gi|217423341|ref|ZP_03454842.1| threonine--tRNA ligase [Burkholderia pseudomallei 576] gi|226199711|ref|ZP_03795264.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237812016|ref|YP_002896467.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|238562605|ref|ZP_04610138.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|242317788|ref|ZP_04816804.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b] gi|254177492|ref|ZP_04884147.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|254180004|ref|ZP_04886603.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|254188582|ref|ZP_04895093.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|254197889|ref|ZP_04904311.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|254199739|ref|ZP_04906105.1| threonyl-tRNA synthetase [Burkholderia mallei FMH] gi|254206061|ref|ZP_04912413.1| threonyl-tRNA synthetase [Burkholderia mallei JHU] gi|254259413|ref|ZP_04950467.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a] gi|254297839|ref|ZP_04965292.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|254358432|ref|ZP_04974705.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|73919776|sp|Q62KI2|SYT_BURMA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73919777|sp|Q63TM2|SYT_BURPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123771913|sp|Q3JT13|SYT_BURP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223324|sp|A3MJT8|SYT_BURM7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223325|sp|A2S2N6|SYT_BURM9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223326|sp|A1V3R3|SYT_BURMS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223327|sp|A3NUI4|SYT_BURP0 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223328|sp|A3N8T1|SYT_BURP6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|52209972|emb|CAH35944.1| threonyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|52428719|gb|AAU49312.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|76580310|gb|ABA49785.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121229611|gb|ABM52129.1| threonyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124293838|gb|ABN03107.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10229] gi|126221009|gb|ABN84515.1| threonine--tRNA ligase [Burkholderia pseudomallei 668] gi|126227144|gb|ABN90684.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|126242219|gb|ABO05312.1| threonine--tRNA ligase [Burkholderia mallei NCTC 10247] gi|134246235|gb|EBA46324.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|147749335|gb|EDK56409.1| threonyl-tRNA synthetase [Burkholderia mallei FMH] gi|147753504|gb|EDK60569.1| threonyl-tRNA synthetase [Burkholderia mallei JHU] gi|148027559|gb|EDK85580.1| threonyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|157806992|gb|EDO84162.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|157936261|gb|EDO91931.1| threonyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|160698531|gb|EDP88501.1| threonyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|169654630|gb|EDS87323.1| threonyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|184210544|gb|EDU07587.1| threonyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|217393199|gb|EEC33220.1| threonine--tRNA ligase [Burkholderia pseudomallei 576] gi|225928297|gb|EEH24331.1| threonine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237505158|gb|ACQ97476.1| threonine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|238522290|gb|EEP85735.1| threonine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|242141027|gb|EES27429.1| threonine--tRNA ligase [Burkholderia pseudomallei 1106b] gi|243061341|gb|EES43527.1| threonine--tRNA ligase [Burkholderia mallei PRL-20] gi|254218102|gb|EET07486.1| threonine--tRNA ligase [Burkholderia pseudomallei 1710a] Length = 635 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + GY E+ P+++ +G Sbjct: 250 LDLFHIQEEAPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E+ +E A + + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGF 412 >gi|254522893|ref|ZP_05134948.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14] gi|219720484|gb|EED39009.1| threonyl-tRNA synthetase [Stenotrophomonas sp. SKA14] Length = 633 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 96/343 (27%), Gaps = 43/343 (12%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQL--PILEKEEHEVCSSLKKL 101 + ++G+ IA+ +V+ K K +L + + + ++ Sbjct: 119 AIEKRMGELIAQDYDVIKKMTPRAEVVEIFKARGEDYKLRLIEDMSDDIQAMGMYYHQEY 178 Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE--------------HFEIGEA 147 + + + + + + + + + + E Sbjct: 179 VDMCRGPHVPNTRFLKAFKLTRISGAYWRGDAQNEQLQRIYGTAWADKKQLEAYIKRIEE 238 Query: 148 LGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 + D R K A V + + + + GY EV P + Sbjct: 239 AEMRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWALWQVVEQYMRKVYRKTGYGEVRCPQI 298 Query: 201 VRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTL 257 + +G + D MF T + ++ +++ + + LP+R+ Sbjct: 299 LDVSLWQKSGHWDNYQDAMFFTESEKRTYALKPMNCPGHVQVFNQGLHSYRDLPIRYGEF 358 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 R+E A G+LR F + + E E A + + Sbjct: 359 GACHRNEPSGALH---GILRVRGFTQDDGHVFCTENQVEAEVTAFHQQALAVYQHFGFDE 415 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 V + L + D W + R S S +Q Sbjct: 416 IQVKIA---LRPESRLGDDA-TWDKAEGALRSALS-SNGVEWQ 453 >gi|325265785|ref|ZP_08132472.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394] gi|324982768|gb|EGC18393.1| threonine--tRNA ligase [Kingella denitrificans ATCC 33394] Length = 637 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 63/199 (31%), Gaps = 10/199 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPRGWTLWQVIEQHMRRELDAAGYREVKTPQIMDKTFWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T + ++ ++++ + + LP+R R+E A Sbjct: 310 ANYKDNMFLTASEKREYAVKPMNCPGHVQIFNNTLRSYRDLPMRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + +I ++ + V L L Sbjct: 370 H---GLMRVRGFVQDDAHIFCTEDQIAEETRKFNLLVMKIYQQFGFEHVSVKLS---LRP 423 Query: 330 SACKTYDLEVWLAGQNLYR 348 D E+W + R Sbjct: 424 EQRAGSD-EIWDKAEQGLR 441 >gi|295677048|ref|YP_003605572.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002] gi|295436891|gb|ADG16061.1| threonyl-tRNA synthetase [Burkholderia sp. CCGE1002] Length = 635 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 98/345 (28%), Gaps = 31/345 (8%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 E I EK + K ++ +RR S +G A E+ Sbjct: 112 FTPEDLEKI----EKRMQELAKKDEPVSRR-VVSRDEAVEYFKGIGEKYKAEIIESIPAG 166 Query: 82 EQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 +++ + + + + + L R G + Sbjct: 167 DEIKLYSHGGFTDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKE 226 Query: 137 LSREHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 + + E D D + V + + ++ Sbjct: 227 DQEAYLHMLEEAEKRDHRKLGKQLDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVND 286 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEI 244 GY E+ PL++ +G + ++MF T + + + ++H + Sbjct: 287 AGYLEIKTPLIMDRSLWEASGHWQNYRENMFTTESEK--RDYAIKPMNCPGHVQVFNHGL 344 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LPLR+ R+E+ A G++R F + + E+ E + Sbjct: 345 RSYRDLPLRYAEFGSCHRNESSGALH---GLMRVRGFVQDDAHIFCTEDQFIGESIAFNT 401 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 A + + + L L A D E W + RE Sbjct: 402 LAMSVYRDFGFDNVEIKLS---LRPDARAGTD-ETWDRAEQGLRE 442 >gi|264679166|ref|YP_003279073.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2] gi|262209679|gb|ACY33777.1| threonyl-tRNA synthetase [Comamonas testosteroni CNB-2] Length = 687 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 65/202 (32%), Gaps = 14/202 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV AP ++ TG K+ ++MF Sbjct: 306 HSPGTVFWHPKGWAVWQQVEQYMRRVYQDNGYQEVKAPQILDKGLWEKTGHWDKYRENMF 365 Query: 221 CTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + + ++ I + LPLRF R+E + G+ Sbjct: 366 TTDSEK--REYALKPMNCPGHIIIFKQGIKSYRDLPLRFGEFGNCHRNEPTGSLH---GI 420 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 +R F + + E+ E S +++ + L T + Sbjct: 421 MRVRAFTQDDGHIFCTEDQIQAEVTAFTSLLQKVYADFGFTNILYRLSTR----PEKRIG 476 Query: 336 DLEVWLAGQNLYREISSCSTCG 357 E W +N E S C Sbjct: 477 TDEAWDKAENALAEGLRASGCE 498 >gi|83954081|ref|ZP_00962801.1| threonyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] gi|83841118|gb|EAP80288.1| threonyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] Length = 649 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 88/317 (27%), Gaps = 24/317 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K + +I K + +R I G V+ + + Sbjct: 110 DRKESFTPEDLGLIEKKMKEIINKRDPVRTEVWDRERAIKHYEDNGEPYKVELINSIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTG 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + +++ E + + D A V L Q + Sbjct: 230 KEKLKAHLNMLEEAAKRDHRKLGREMDLYHMQEEAPGQVFWHANGWLIYTQLQDYMRRKQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ D MF R + + + Sbjct: 290 RAGGYVEVNTPQVVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKSVNALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I + LPLR R E A G++R F + + E+ E Sbjct: 350 IFNQGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDGHIFCAEDQIEAE 406 Query: 299 HERMLSCAEEILKRLDL 315 + + I K L Sbjct: 407 TAKFIEFLSGIYKDLGF 423 >gi|297527274|ref|YP_003669298.1| prolyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] gi|297256190|gb|ADI32399.1| prolyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710] Length = 483 Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 94/285 (32%), Gaps = 16/285 (5%) Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 + + EI + ++D K L +++ + + + E + Sbjct: 14 KYSDFPKWYHEILKHAKIVDTRYPVKGMNVWMPYGLKALRMIQKIMINLLEETGHEEAYF 73 Query: 193 TEVSAPLLVRDE----AMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESK 248 + + E +G + ++ PTSE + +++ I K Sbjct: 74 PTMIPESVFSKEKDFLQGFGGETFVVEGTMTKKFNEKLFVRPTSETVMYYMWNIWIKGRK 133 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCA 306 LPL+ + FR E + T +LR + E++ + L+ Sbjct: 134 DLPLKMYQIVNVFRYE----TKMTHPILRVREIMSFIEAHTAHATSEEAEKQINEALNIY 189 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 ++ L L Y +V D A YD + E+ S G +R + Sbjct: 190 KKFFDSLLLPYFIVKTPPWDTFAGAEYNYDFITAMP-DGKGLELGSVINLGQKFARAFDI 248 Query: 367 RYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENYLNADGSVTIP 410 ++ D + K K+ + + V R L A++ + + G P Sbjct: 249 KFMDSDGK-TKYVYQ---TCYGVSERTLGAVIAIHGDKKGLFLPP 289 >gi|16124719|ref|NP_419283.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15] gi|221233433|ref|YP_002515869.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000] gi|22654137|sp|Q9AAX8|SYT_CAUCR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783515|sp|B8GZS7|SYT_CAUCN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|13421637|gb|AAK22451.1| threonyl-tRNA synthetase [Caulobacter crescentus CB15] gi|220962605|gb|ACL93961.1| threonyl-tRNA synthetase [Caulobacter crescentus NA1000] Length = 655 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 58/434 (13%), Positives = 113/434 (26%), Gaps = 65/434 (14%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR---RNSNSAQIGQAIAEGNLSLVDALKNET 77 R + + ++++ + ++ + E I RN I G ++ Sbjct: 113 RDEPFSLDDLEKIEKRMKEIVDRDEKITREVWDRNEA---IAHFDGIGEQYKAQIIR--- 166 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 L + I + + + + A + I+ Sbjct: 167 -DLPDTDTITVYRQGNWKDLCRGPHLPSTKHVGKAFKLTKLAGAYWRGDQNNAQLQRIYG 225 Query: 138 SREHFEIGEALGLMDFDRATKLSGAR---------------FSVLTGHLAHLERALGQFM 182 + E L + A K + V + + Sbjct: 226 TAWASEADLEAHLKRIEEAEKRDHRKLGKTMDLFHIQEEGKGMVFWHPKGWALYRVLEDY 285 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH 242 + GY EV P ++ +G KF MF + + + Sbjct: 286 MRRRLDAAGYKEVKTPQILDRSLWEKSGHAEKFGHAMFMCESAEGEVLAVKPMNCPGHIQ 345 Query: 243 EII----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + LPLR R E A G++R F + + REE E Sbjct: 346 IFNVGQKSYRELPLRMAEFGACHRYEPSGA---MHGIMRVRAFTQDDAHIFCREEQVTEE 402 Query: 299 HERMLSCAEEILKRLDLHY-RVVSLCTGDLGFSACKTYD---------------LEVWLA 342 R + + L + +L +T+D Sbjct: 403 SARFIELLRSVYNDLGMTLADTKFSTRPELRAGTDETWDKAEAALAAAAEAAGETLTLQP 462 Query: 343 GQNLY----RE------ISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLNGSGV 387 G+ + E I CG Q R+++ Y + + L+ + + Sbjct: 463 GEGAFYGPKLEFSLKDAIGRVWQCGTLQLDFVLPERLDAEYVSEDGSKKRPV-MLHRAIL 521 Query: 388 AV-GRCLIAILENY 400 R + +LEN+ Sbjct: 522 GSFERFIGILLENF 535 >gi|83942907|ref|ZP_00955367.1| threonyl-tRNA synthetase [Sulfitobacter sp. EE-36] gi|83845915|gb|EAP83792.1| threonyl-tRNA synthetase [Sulfitobacter sp. EE-36] Length = 649 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 88/317 (27%), Gaps = 24/317 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K + +I K + +R I G V+ + + Sbjct: 110 DRKESFTPEDLGLIEKKMKEIINKRDPVRTEVWDRERAIKHYEDNGEPYKVELINSIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTG 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + +++ E + + D A V L Q + Sbjct: 230 KEKLKAHLNMLEEAAKRDHRKLGREMDLYHMQEEAPGQVFWHANGWLIYTQLQDYMRRKQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ D MF R + + + Sbjct: 290 RAGGYVEVNTPQVVDRKLWEASGHWEKYQDHMFIVEVDEEHAREKSVNALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I + LPLR R E A G++R F + + E+ E Sbjct: 350 IFNQGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDGHIFCAEDQIEAE 406 Query: 299 HERMLSCAEEILKRLDL 315 + + I K L Sbjct: 407 TAKFIEFLSGIYKDLGF 423 >gi|260682273|ref|YP_003213558.1| threonyl-tRNA synthetase [Clostridium difficile CD196] gi|260685872|ref|YP_003217005.1| threonyl-tRNA synthetase [Clostridium difficile R20291] gi|260208436|emb|CBA60998.1| threonyl-tRNA synthetase [Clostridium difficile CD196] gi|260211888|emb|CBE02332.1| threonyl-tRNA synthetase [Clostridium difficile R20291] Length = 670 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 105/350 (30%), Gaps = 45/350 (12%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG----NLSLVDALKNETSTLKEQLPIL 87 +D +R++ + +E I A + + E ++ +K + K +L Sbjct: 136 DIDLDHRLVPEDLEKIEAEMKKIAKE--DLKIERFELPRNEALELMKEQGEDYKVELISD 193 Query: 88 EKEEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKP 132 E + + + + P N +L R G Sbjct: 194 LPESEIISFYKQGDFTDLCRGPHLPSTKKVKAVKLQSVAGAYWRGDENNKMLQRIYGTSF 253 Query: 133 SAIHLSREHFEIGEALGLMD----------FDRATKLSGARFSVLTGHLAHLERALGQFM 182 E+ + E D F + G + G E Sbjct: 254 EKNKDLEEYLHLLEEAKKRDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWRE 313 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNL 239 I GY E+ +P+++ + +G + ++M+ + + P + Sbjct: 314 IHRKA---GYIEIESPIILNRKLWETSGHWYHYKENMYTVKIDDEDYAIKPMNCPGGLIY 370 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ ++ + P+R L R E A + G++R F + + E E Sbjct: 371 YNSQLHSYRDFPMRVAELGRVHRHELSGALQ---GLMRVRAFTQDDSHIFMLPEQIKDEI 427 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + + + I K Y + + D E W A +N RE Sbjct: 428 KGVANLIDGIYKTFGFEYNLELSTRPE----NSMGSD-EEWEAAENGLRE 472 >gi|169829542|ref|YP_001699700.1| threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41] gi|168994030|gb|ACA41570.1| Threonyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41] Length = 643 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 117/343 (34%), Gaps = 22/343 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE--GNLSLVDALKNETSTLK 81 +E + +++++ + +I E++ R + S QA+ E G+ ++ L+ + + Sbjct: 114 PITAEDLPAIEKEMKKII--AENLEVERKNVSRAEAQAMYEEIGDEYKLELLEAIPADEQ 171 Query: 82 EQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 + + + + L +++ +L R G Sbjct: 172 VSIYYQGEFFDLCRGIHVPSTGKLREFKLLSLAGAYWRGNSDNKMLQRIYGTAFFKKEEL 231 Query: 139 REHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 + H ++ E D + K L V G L A + +I+ + + Sbjct: 232 KHHLQMLEEAKERDHRKIGKELELFTTSQKVGQGLPLWLPNGATIRRVIERYIVDKELSL 291 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFADD----MFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + + P + +Y + + Sbjct: 292 GYKHVYTPVLGSKELYQTSGHWDHYQDSIFPPMEMDNETLIMRPMNCPHHMMVYKNSMHS 351 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 +SLPLR L R E A G+ R + R + E ++++ Sbjct: 352 YRSLPLRIAELGTMHRYEMSGA---VSGLQRVRGMTLNDAHIFVRPDQIKAEFQKVVQLI 408 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K DL+ L D + D +W Q++ +E Sbjct: 409 LEVYKDFDLNDYSFRLSYRDPADTEKYFNDDAMWEKAQSMLKE 451 >gi|330503839|ref|YP_004380708.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01] gi|328918125|gb|AEB58956.1| threonyl-tRNA synthetase [Pseudomonas mendocina NK-01] Length = 640 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 63/200 (31%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + EHGY EV P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHPNGWTVYQVLEQYMRQVQREHGYVEVRTPQVVDRILWERSGHW 309 Query: 213 PKFADDMFCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T + + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTASENRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + ++ + L T Sbjct: 370 H---GIMRVRGFVQDDAHIFCTEDQVKKEAADFIRLTLQVYSDFGFTDIAMKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNLYRE 349 A + E+W + E Sbjct: 423 PAKRVGSDELWDRAEGALAE 442 >gi|225025724|ref|ZP_03714916.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC 23834] gi|224941505|gb|EEG22714.1| hypothetical protein EIKCOROL_02627 [Eikenella corrodens ATCC 23834] Length = 635 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 61/199 (30%), Gaps = 10/199 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + GY EV P ++ +G Sbjct: 252 LDLFHLQDEAPGMVFWHPRGWTLWQTIEQHMRRELDAAGYREVKTPQILDKTFWEKSGHW 311 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ +++H + + LP+R R+E A Sbjct: 312 ANYKDNMFTTSSEKRDYAVKPMNCPGHVQIFNHGLRSYRDLPMRLAEFGSCHRNEPSGAL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E +I K+ + + L L Sbjct: 372 H---GLMRVRGFVQDDAHIFCTEDQIAEETRAFNQLVMKIYKQFGFEHVSIKLS---LRP 425 Query: 330 SACKTYDLEVWLAGQNLYR 348 D E W + R Sbjct: 426 EQRAGTD-ETWDKAEQGLR 443 >gi|144899402|emb|CAM76266.1| Threonyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 638 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 41/154 (26%), Gaps = 7/154 (4%) Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG 225 V + + Y EV P LV +G KF++ MF Sbjct: 265 VFWHQKGWALYRTVESYMRNRLEAENYQEVKTPQLVDFSLWEASGHADKFSESMFTIKTQ 324 Query: 226 RWLIPTSEVSLTNLYSHEII----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + + + LPLR R E A G++R F Sbjct: 325 DERHLAVKPMNCPCHVQIFRQGIKSYRDLPLRMAEFGSCHRYEPSGALH---GIMRVRAF 381 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + E+ +E + + + Sbjct: 382 TQDDAHIFCTEDQITSETIAFCQLLKLVYQDFGF 415 >gi|315648987|ref|ZP_07902081.1| threonyl-tRNA synthetase [Paenibacillus vortex V453] gi|315275668|gb|EFU39022.1| threonyl-tRNA synthetase [Paenibacillus vortex V453] Length = 645 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 72/198 (36%), Gaps = 8/198 (4%) Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 +L G + + A L R L ++++D+ GY V P+L E +G + + Sbjct: 260 QLVGQGLPIWLPNGAKLRRTLERYIVDME-ERLGYQHVYTPVLGNVELYKTSGHWEHYQE 318 Query: 218 DMFCTTDG----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 DMF + L P + +Y ++ + LP+R L R E A Sbjct: 319 DMFPKMEMDNEELVLRPMNCPHHMMVYKSDMHSYRDLPIRIAELGMQHRYEMSGALT--- 375 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 G+ R + R + E R++ + K +H L D + Sbjct: 376 GLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKDFGIHDYRFRLSYRDPQDTEKY 435 Query: 334 TYDLEVWLAGQNLYREIS 351 + E+W Q + RE+ Sbjct: 436 FQNDEMWEMSQRMLREVV 453 >gi|83719712|ref|YP_443111.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264] gi|167620276|ref|ZP_02388907.1| threonyl-tRNA synthetase [Burkholderia thailandensis Bt4] gi|123767616|sp|Q2SVD8|SYT_BURTA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|83653537|gb|ABC37600.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 635 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + GY E+ P+++ +G Sbjct: 250 LDLFHIQEEAPGMVFWHPKGWTLWQRVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E+ +E A + + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGF 412 >gi|294789007|ref|ZP_06754247.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453] gi|294483109|gb|EFG30796.1| threonine--tRNA ligase [Simonsiella muelleri ATCC 29453] Length = 638 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 55/166 (33%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY EV P ++ +G Sbjct: 251 LDLFHLQDEAPGMVFWHPRGWALWQVIEQHMRHELTAAGYQEVKTPQVMDKTFWEKSGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ +++H + + LP+R R+E A Sbjct: 311 ANYKDNMFLTSSEKRDYAVKPMNCPGHVQIFNHALRSYRDLPMRLAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + +I ++ Sbjct: 371 H---GLMRVRGFVQDDAHIFCTEDQIAEETRKFNLLVMKIYQQFGF 413 >gi|238027731|ref|YP_002911962.1| threonyl-tRNA synthetase [Burkholderia glumae BGR1] gi|237876925|gb|ACR29258.1| Threonyl-tRNA synthetase [Burkholderia glumae BGR1] Length = 635 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 54/168 (32%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + ++H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E+ E A + K Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFIAESIAFNELAMSVYKDFGF 412 >gi|297538938|ref|YP_003674707.1| threonyl-tRNA synthetase [Methylotenera sp. 301] gi|297258285|gb|ADI30130.1| threonyl-tRNA synthetase [Methylotenera sp. 301] Length = 635 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 79/283 (27%), Gaps = 47/283 (16%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + ++ Y EV P ++ +G + Sbjct: 254 HMQDDAPGMVFWHPRGWSIWQEVEQYMRKMFRDYNYQEVRTPTIMDRTLWEKSGHWQNYR 313 Query: 217 DDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + MF T+ ++ +++ + + LPLR R+E + Sbjct: 314 EGMFVTSSESRDYAVKPMNCPGHVQIFNSSLHSYRDLPLRLAEFGSCHRNEPSGSLH--- 370 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL-----------------KRLDLH 316 G++R F + + EE E + + KR+ Sbjct: 371 GLMRVRGFTQDDAHIFCTEEQVEAEVADFIKMLYKAYGDFGFNDVLVKLSTRPEKRIGTD 430 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR----------EISSCSTCGNFQ-----S 361 T D E + G+ + + CG Q Sbjct: 431 ADWDKAETSLANALKLNNLDFE-YQPGEGAFYGPKIEFTLKDSLGRLWQCGTIQLDPNLP 489 Query: 362 RRMNSRYRDPNSKSLKFTHTLN----GSGVAVGRCLIAILENY 400 R+ + Y ++ L+ GS + R + ++ENY Sbjct: 490 ERLGAEYVAEDNSRKHPV-MLHRAIVGS---MERFIGILIENY 528 >gi|261408878|ref|YP_003245119.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261285341|gb|ACX67312.1| threonyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 645 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 72/198 (36%), Gaps = 8/198 (4%) Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 +L G + + A L R L ++++D+ GY V P+L E +G + + Sbjct: 260 QLVGQGLPIWLPNGAKLRRTLERYIVDME-ERLGYQHVYTPVLGNVELYKTSGHWEHYQE 318 Query: 218 DMFCTTDG----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 DMF + L P + +Y ++ + LP+R L R E A Sbjct: 319 DMFPKMEMDNEELVLRPMNCPHHMMVYKSDMHSYRDLPIRIAELGMQHRYEMSGALT--- 375 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 G+ R + R + E R++ + K +H L D + Sbjct: 376 GLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKDFGIHDYRFRLSYRDPQDTEKY 435 Query: 334 TYDLEVWLAGQNLYREIS 351 + E+W Q + RE+ Sbjct: 436 FQNDEMWEMSQRMLREVV 453 >gi|167422088|ref|ZP_02313841.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|166958900|gb|EDR55921.1| threonyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] Length = 369 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 10/167 (5%) Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTN 238 + + E+ Y EV P ++ TG +A+ MF T + P + Sbjct: 7 FVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQ 66 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +++ + + LPLR R+E A G++R F + + EE E Sbjct: 67 IFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHVFCTEEQVRDE 123 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + ++ VV L T + E+W ++ Sbjct: 124 VNSCIKMVYDMYSTFGFEKIVVKLSTR----PEKRIGSDELWTRAED 166 >gi|153855829|ref|ZP_01996815.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814] gi|149751870|gb|EDM61801.1| hypothetical protein DORLON_02836 [Dorea longicatena DSM 13814] Length = 645 Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 106/327 (32%), Gaps = 24/327 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R +E + ++++ + ++K+ I + I E + L + Sbjct: 109 DRETPFVAEDLEKIEKEMKKIVKEALPIERFTKTREEAIA-YFKEKDEPYKVELIEDLPE 167 Query: 80 LKEQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E++ ++ E K + L S +L R G Sbjct: 168 -GEEISFYQQGEFVDLCAGPHLMTTKPVKAFKLTSLAGAYWRGSEKNKMLTRIYGISYPK 226 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 L E+ + E D + K G F L+ L + +LH Sbjct: 227 KALLDEYLTMLEEAKRRDHRKLGKELGLFMMCEEGPGFPFFLPKGMVLKNTLLDYWRELH 286 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 + GY EVS P+++ +G + ++M+ T + + P + +Y E Sbjct: 287 -KKAGYVEVSTPIILSRHLWETSGHWDHYKENMYTTQIDGEDFAIKPMNCPGGMLVYKAE 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 K LPLR L R E G++R F + + E E + ++ Sbjct: 346 PRSYKDLPLRVGELGLVHRHEKSG---QLHGLMRVRCFTQDDAHIFMMPEQIRDEIKGVV 402 Query: 304 SCAEEILK--RLDLHYRVVSLCTGDLG 328 + +E+ + H + + +G Sbjct: 403 ALIDEVYQLFGFKYHVELSTRPEDSMG 429 >gi|329928815|ref|ZP_08282654.1| threonine--tRNA ligase [Paenibacillus sp. HGF5] gi|328937458|gb|EGG33879.1| threonine--tRNA ligase [Paenibacillus sp. HGF5] Length = 645 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 72/198 (36%), Gaps = 8/198 (4%) Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 +L G + + A L R L ++++D+ GY V P+L E +G + + Sbjct: 260 QLVGQGLPIWLPNGAKLRRTLERYIVDME-ERLGYQHVYTPVLGNVELYKTSGHWEHYQE 318 Query: 218 DMFCTTDG----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 DMF + L P + +Y ++ + LP+R L R E A Sbjct: 319 DMFPKMEMDNEELVLRPMNCPHHMMVYKSDMHSYRDLPIRIAELGMQHRYEMSGALT--- 375 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 G+ R + R + E R++ + K +H L D + Sbjct: 376 GLHRVRAMTLNDSHIFCRPDQIKEEFARVIQLIMTVYKDFGIHDYRFRLSYRDPQDTEKY 435 Query: 334 TYDLEVWLAGQNLYREIS 351 + E+W Q + RE+ Sbjct: 436 FQNDEMWEMSQRMLREVV 453 >gi|37526560|ref|NP_929904.1| threonyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|73919813|sp|Q7N3P6|SYT_PHOLL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|36785991|emb|CAE15043.1| threonyl-tRNA synthetase (threonine--tRNA ligase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 642 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 83/307 (27%), Gaps = 32/307 (10%) Query: 38 RILIKK-IEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNETSTLKEQL--PILEKEEH 92 R L ++ IE + R + + I + D K Q+ + +++ Sbjct: 110 RALTQEDIELLEKRMLELAKKDYDVIKKKVNWQEARDTFVARGEDYKVQILDENISRDDR 169 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL-- 150 + ++ I + + + + + S + + + A Sbjct: 170 PGLYNHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSNNKMLQRIYGTAWADKKQL 229 Query: 151 -------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 D A + + + E+ Sbjct: 230 NTYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQ 289 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESK 248 Y EV P ++ TG + + MF T + P + +++ + + Sbjct: 290 YQEVKGPFMMDRVMWERTGHWENYGEHMFTTSSENREYCVKPMNCPGHIQIFNQGLKSYR 349 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LPLR R+E A G++R F + + EE E + + Sbjct: 350 DLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIHREVSSCIKMVYD 406 Query: 309 ILKRLDL 315 + Sbjct: 407 VYSTFGF 413 >gi|9955215|pdb|1EVK|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With The Ligand Threonine gi|9955216|pdb|1EVK|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With The Ligand Threonine gi|9955217|pdb|1EVL|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|9955218|pdb|1EVL|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|9955219|pdb|1EVL|C Chain C, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|9955220|pdb|1EVL|D Chain D, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With A Threonyl Adenylate Analog gi|12084202|pdb|1FYF|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase Complexed With A Seryl Adenylate Analog gi|12084203|pdb|1FYF|B Chain B, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase Complexed With A Seryl Adenylate Analog gi|20664135|pdb|1KOG|A Chain A, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664136|pdb|1KOG|B Chain B, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664137|pdb|1KOG|C Chain C, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664138|pdb|1KOG|D Chain D, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664139|pdb|1KOG|E Chain E, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664140|pdb|1KOG|F Chain F, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664141|pdb|1KOG|G Chain G, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator gi|20664142|pdb|1KOG|H Chain H, Crystal Structure Of E. Coli Threonyl-Trna Synthetase Interacting With The Essential Domain Of Its Mrna Operator Length = 401 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 10 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 69 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E + Sbjct: 70 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 129 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ VV L T Sbjct: 130 H---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTR---- 182 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 183 PEKRIGSDEMW 193 >gi|332187352|ref|ZP_08389090.1| threonyl-tRNA synthetase [Sphingomonas sp. S17] gi|332012513|gb|EGI54580.1| threonyl-tRNA synthetase [Sphingomonas sp. S17] Length = 664 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 94/342 (27%), Gaps = 36/342 (10%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + +++ + R +I K E + + I + A+G + + + Sbjct: 117 EDLPAIEAEMRKIIAKDEPLIREVWTREQLIERWKAQGESFKAEWAAELPDDEELTVYRA 176 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL----------------IRSVGKK 131 K E + T + + + Sbjct: 177 GKGEDAWLDMCRGPHLASTGKLDPNAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNKKQL 236 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + E + + D A SV + + + G Sbjct: 237 AEHLTRLEEAAKRDHRKLGNEMDLFHLQQEAHGSVFWHPKGYRIWRELEAYMRRAIDATG 296 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----------------DGRWLIPTSEV 234 Y EV P ++ +G K+ ++MF L P + Sbjct: 297 YREVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGPLVSDDAQWMALKPMNCP 356 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 + ++ I + LPLRF R+E A G++R QF + + RE+ Sbjct: 357 AHVLIFRQGIKSYRDLPLRFYENGCCHRNEPHGALH---GLMRVRQFTQDDAHIFCREDQ 413 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 E A+ I K Y + + F + +D Sbjct: 414 IVEEVRAFCELADRIYKDFGFTYSIKLALRPEKRFGTEEMWD 455 >gi|118444060|ref|YP_877833.1| threonyl-tRNA synthetase [Clostridium novyi NT] gi|166223336|sp|A0PZN1|SYT_CLONN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118134516|gb|ABK61560.1| threonyl-tRNA synthetase [Clostridium novyi NT] Length = 637 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 93/302 (30%), Gaps = 32/302 (10%) Query: 44 IEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 +E I N + Q + ++ +K K +L EE + + Sbjct: 117 LEKIEKEMNKIVKENLQLKKFTKSREDAINFMKERNEDYKVELIEDLPEESIISFYEQGD 176 Query: 102 ISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 + P + N +L R G + E+ + E Sbjct: 177 FVDLCAGPHVPSTKEVKAIKLLSVAGAYWRGNENNKMLQRIYGTAFTKKAELEEYLHMLE 236 Query: 147 ALGLMDFDR--------ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 D + K G F L L + ++H + GY E+ P Sbjct: 237 EAKKRDHRKLGKELGLFDLKEEGPGFPFFYPKGMILRNTLENYWREMH-EKAGYGEIRTP 295 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +++ ++ + +G + ++M+ T + + P + +Y ++ + LP+R Sbjct: 296 IILNEKLWHQSGHWDHYKENMYFTKIDGEDYAIKPMNCPGSILVYKSDLHSYRELPIRLG 355 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 L R E G++R F + + +E +E ++ + Sbjct: 356 ELGLVHRHE---YSGALHGLMRVRNFTQDDAHIFMTKEQITSEILGVIKMIDNFYSLFGF 412 Query: 316 HY 317 Y Sbjct: 413 EY 414 >gi|188025947|ref|ZP_02960307.2| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827] gi|188021023|gb|EDU59063.1| hypothetical protein PROSTU_02247 [Providencia stuartii ATCC 25827] Length = 653 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 34/321 (10%), Positives = 82/321 (25%), Gaps = 39/321 (12%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNETSTL 80 + +Y L + +E + R + I + + Sbjct: 115 YDIDLDYAL--------TQEDLEKLEKRMLELAKTDYDVIKKRVSWAEARETFVARGEDY 166 Query: 81 KEQL--PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 K ++ + +++ ++ I + + + + + S + Sbjct: 167 KVEILDQNISQDDRPGLYHHQEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGNSDNKML 226 Query: 139 REHFEIGEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERA 177 + + A D A + Sbjct: 227 QRIYGTAWADKKQLNAYLLRLEEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFR 286 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEV 234 + + + Y EV P ++ TG + D MF T + P + Sbjct: 287 ELETFVRTKLKAYNYQEVKGPFMMDRVLWERTGHWENYKDAMFTTSSENREYCVKPMNCP 346 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +++ + + LPLR R+E A G++R F + + E+ Sbjct: 347 GHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEDQ 403 Query: 295 SFTEHERMLSCAEEILKRLDL 315 +E + ++ Sbjct: 404 ILSEVTDCIKMIYDVYATFGF 424 >gi|84516459|ref|ZP_01003818.1| threonyl-tRNA synthetase [Loktanella vestfoldensis SKA53] gi|84509495|gb|EAQ05953.1| threonyl-tRNA synthetase [Loktanella vestfoldensis SKA53] Length = 648 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 97/334 (29%), Gaps = 40/334 (11%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K + +I K +D+R + + G V+ Sbjct: 110 DRKEPFTPEDLGLIEKKMKEIINKRDDVRTEIWDRARAVQYYTDRGEPYKVE-------- 161 Query: 80 LKEQLPILEKEEHEVCSSLKK-----LISCIPNVPLEEV--------PIGTSANENILIR 126 L + +P E + + VP + + +L R Sbjct: 162 LIDSIPGNEPLRMYWHGDWQDLCRGPHLQNTGQVPADAFKLMSIAGAYWRGDSTRPMLQR 221 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALG 179 G + ++H E D + + A V Sbjct: 222 IYGTAFTNKDALKDHLHRLEEAAKRDHRKLGREMNLFHMQEEAPGQVFWHPDGWTIYTEL 281 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVS 235 Q + GY EV+ P +V + +G K+ ++MF R + Sbjct: 282 QDYMRRRQRAGGYVEVNTPQVVDRKLWEKSGHWDKYQENMFIVEVDEEHAREKAVNALKP 341 Query: 236 LTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + +I + LPLR R E A G++R F + + Sbjct: 342 MNCPCHVQIFNQGLKSYRDLPLRMAEFGSCARYEPSGALH---GIMRVRGFTQDDGHIFC 398 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 RE+ E R ++ + L + + L T Sbjct: 399 REDQIEPETARFIAFLSRVYADLGFNDWTIKLST 432 >gi|326572997|gb|EGE22976.1| threonyl-tRNA synthetase [Moraxella catarrhalis CO72] Length = 639 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 10/173 (5%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + ++GY E+ P +V +G + Sbjct: 254 HMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYG 313 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRD 271 + MF T + + + ++ + LPLR R+E + Sbjct: 314 EMMFTTASEK--RDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH- 370 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E + ++ K + + L T Sbjct: 371 --GIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421 >gi|326562407|gb|EGE12726.1| threonyl-tRNA synthetase [Moraxella catarrhalis 7169] gi|326569116|gb|EGE19178.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC1] Length = 639 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 10/173 (5%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + ++GY E+ P +V +G + Sbjct: 254 HMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYG 313 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRD 271 + MF T + + + ++ + LPLR R+E + Sbjct: 314 EMMFTTASEK--RDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH- 370 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E + ++ K + + L T Sbjct: 371 --GIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421 >gi|253989346|ref|YP_003040702.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780796|emb|CAQ83958.1| threonyl-tRNA synthetase [Photorhabdus asymbiotica] Length = 642 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 49/166 (29%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKEYQYQEVKGPFMMDRVMWERTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + MF T + P + +++ + + LPLR R+E A Sbjct: 311 ENYNEHMFTTSSENREYCVKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIHREVSNCIKMVYDVYSTFGF 413 >gi|302325997|gb|ADL25198.1| threonine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 645 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 59/211 (27%), Gaps = 6/211 (2%) Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 ++ + + + E + + D + V Sbjct: 215 WHGDQNSDQLTRVYGTCFADKEGLETYLKFLEEAEKRDHRKIGKEMDLYHIEDHSPGMVF 274 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW 227 + I GY EV P +V +G K+ ++MF T G Sbjct: 275 WHPKGTKMVNALKDYIRGKIDRRGYLEVITPEIVNKTLWIKSGHADKYNENMFKTLAGDV 334 Query: 228 LIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + ++ +++ + + LP+R R E G++R F + Sbjct: 335 EMAVKPMNCPCHIQIFNTGLRSWRDLPMRLAEFGKCHRYEPAG---TMHGLMRVRGFVQD 391 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + E+ +E + +EI Sbjct: 392 DAHIFCTEDQIASEVADFCALVKEIYHDFGF 422 >gi|301303993|ref|ZP_07210111.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1] gi|300840790|gb|EFK68550.1| threonyl-tRNA synthetase [Escherichia coli MS 124-1] Length = 429 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 38 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 97 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E + Sbjct: 98 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 157 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ VV L T Sbjct: 158 H---GLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTR---- 210 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 211 PEKRIGSDEMW 221 >gi|238898885|ref|YP_002924567.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259516538|sp|C4K776|SYT_HAMD5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229466645|gb|ACQ68419.1| threonine tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 638 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 70/210 (33%), Gaps = 15/210 (7%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 R+H +IG+ L F G F G + E + I E+ Y EV P Sbjct: 242 RDHRKIGKTQDLYHFQEEA--PGMVFWHENGWIVFRELEIL---IREKLKEYEYQEVKGP 296 Query: 199 LLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 ++ TG ++++MF T + P + ++ + + LPLR Sbjct: 297 FMMDRVLWEKTGHWENYSENMFTTLSENREYCIKPMNCPGHLEIFKQGLKSYRDLPLRMA 356 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R+E A G++R F + + E+ E + +I + Sbjct: 357 EFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEKQVRKEVSNCIKMTYDIYQTFGF 413 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 V L T + E+W + Sbjct: 414 KKIAVKLSTR----PEKRIGSDEIWTQAEE 439 >gi|49168658|emb|CAE02700.1| putative threonyl tRNA synthase [Yarrowia lipolytica] Length = 461 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 81/222 (36%), Gaps = 29/222 (13%) Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---- 236 + L G+ E+S+P++ ++ +G KF DDMF G E Sbjct: 82 EFMRLQLRVFGFQEISSPIMYKNSLWKQSGHWEKFQDDMFRVQPGHEETSVEEEFSLKPM 141 Query: 237 -----TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 L++ + LPLR++ +P R+EA A G+ R +F + + Sbjct: 142 NCPGHCLLFNSLKRSYRELPLRYSDFSPLHRNEASGALI---GLTRVRRFHQDDGHIFCT 198 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT------GDL----GFSACKTYDLEVWL 341 E +E R L ++ L V L T GD+ T L+ W Sbjct: 199 PEQVESEISRALKLVQQTYNTFGLEISRVVLSTRPETFIGDIEQWNDAEKALTSVLDSWS 258 Query: 342 AGQNLYREISSCSTCGN--FQSRRMNSRYRDPNSKSLKFTHT 381 + + E+ G+ F +++ +D + K + T Sbjct: 259 VSKGKW-EL----NAGDGAFYGPKIDILVKDKHGKEHQTATT 295 >gi|311105446|ref|YP_003978299.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8] gi|310760135|gb|ADP15584.1| threonyl-tRNA synthetase [Achromobacter xylosoxidans A8] Length = 650 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 65/202 (32%), Gaps = 10/202 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + + A + + + ++GY EV AP ++ TG Sbjct: 253 RELELFHFQDEAPGLIFWHPKGWALWQQVEQYMRSVYRDNGYQEVKAPQILDISLWKKTG 312 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + ++ +++ + + LPLR+ R+E Sbjct: 313 HWDNYRENMFTTESENRVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSG 372 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 + GM+R F + + EE E + +++ + + + T Sbjct: 373 SLH---GMMRVRGFTQDDGHIFCTEEQLQDECADFTALLQKVYRDFGFTEVLYKVATR-- 427 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 + EVW + E Sbjct: 428 --PEKRIGSDEVWDTAEAALME 447 >gi|50543472|ref|XP_499902.1| YALI0A09427p [Yarrowia lipolytica] gi|49645767|emb|CAG83829.1| YALI0A09427p [Yarrowia lipolytica] Length = 461 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 81/222 (36%), Gaps = 29/222 (13%) Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---- 236 + L G+ E+S+P++ ++ +G KF DDMF G E Sbjct: 82 EFMRLQLRVFGFQEISSPIMYKNSLWKQSGHWEKFQDDMFRVQPGHEETSVEEEFSLKPM 141 Query: 237 -----TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 L++ + LPLR++ +P R+EA A G+ R +F + + Sbjct: 142 NCPGHCLLFNSLKRSYRELPLRYSDFSPLHRNEASGALS---GLTRVRRFHQDDGHIFCT 198 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT------GDL----GFSACKTYDLEVWL 341 E +E R L ++ L V L T GD+ T L+ W Sbjct: 199 PEQVESEISRALKLVQQTYNTFGLEISRVVLSTRPETFIGDIEQWNDAEKALTSVLDSWS 258 Query: 342 AGQNLYREISSCSTCGN--FQSRRMNSRYRDPNSKSLKFTHT 381 + + E+ G+ F +++ +D + K + T Sbjct: 259 VSKGKW-EL----NAGDGAFYGPKIDILVKDKHGKEHQTATT 295 >gi|261416474|ref|YP_003250157.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372930|gb|ACX75675.1| threonyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 695 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 59/211 (27%), Gaps = 6/211 (2%) Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 ++ + + + E + + D + V Sbjct: 265 WHGDQNSDQLTRVYGTCFADKEGLETYLKFLEEAEKRDHRKIGKEMDLYHIEDHSPGMVF 324 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW 227 + I GY EV P +V +G K+ ++MF T G Sbjct: 325 WHPKGTKMVNALKDYIRGKIDRRGYLEVITPEIVNKTLWIKSGHADKYNENMFKTLAGDV 384 Query: 228 LIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + ++ +++ + + LP+R R E G++R F + Sbjct: 385 EMAVKPMNCPCHIQIFNTGLRSWRDLPMRLAEFGKCHRYEPAG---TMHGLMRVRGFVQD 441 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + E+ +E + +EI Sbjct: 442 DAHIFCTEDQIASEVADFCALVKEIYHDFGF 472 >gi|164659836|ref|XP_001731042.1| hypothetical protein MGL_2041 [Malassezia globosa CBS 7966] gi|159104940|gb|EDP43828.1| hypothetical protein MGL_2041 [Malassezia globosa CBS 7966] Length = 815 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 58/165 (35%), Gaps = 13/165 (7%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 S + H L R + + + DL+ GY EV P L R +G K+ +DM Sbjct: 339 SSPGSPFVMPHGMRLLRKVERVIRDLY-DTFGYDEVQTPQLFRSSLWKQSGHWEKYREDM 397 Query: 220 FCTTDGRWLIPTSEVSL---------TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 F +V +++H+ + LP+R +P R+EA A Sbjct: 398 FSAQGFSCCGAHDDVFGLKPMNCPGHCVMFAHQPRSYRELPMRLAEFSPLHRNEASGALS 457 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G+ R +F + + TE E ML + Sbjct: 458 ---GLTRVRRFHQDDAHVFCTPAQVATEIESMLHMLSLAYRVFGF 499 >gi|46580942|ref|YP_011750.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|120601757|ref|YP_966157.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|81566250|sp|Q728R5|SYT_DESVH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166987320|sp|A1VBB4|SYT_DESVV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|46450362|gb|AAS97010.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|120561986|gb|ABM27730.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|311234632|gb|ADP87486.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris RCH1] Length = 644 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 58/175 (33%), Gaps = 7/175 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + + + F+ H + Y V P L+R E Sbjct: 247 QQLDLFAFHEDVAPGMVFWHPKGMLVRTIIEDFLRKEHL-KRRYDIVQGPQLLRRELWEK 305 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 +G + ++M+ T ++ +Y I + LP RF L R E Sbjct: 306 SGHYDNYRENMYFTEIDENAYGVKPMNCLAHMLIYRSAIRSYRDLPKRFFELGVVHRHEK 365 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 G+LR QF + + I R + E +++ +++ Y+V Sbjct: 366 SGVLH---GLLRVRQFTQDDAHIICRPDQLEDEIIDVIALVRDLMNLFGFDYKVA 417 >gi|326574765|gb|EGE24699.1| threonyl-tRNA synthetase [Moraxella catarrhalis O35E] Length = 639 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 10/173 (5%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + ++GY E+ P +V +G + Sbjct: 254 HMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYG 313 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRD 271 + MF T + + + ++ + LPLR R+E + Sbjct: 314 EMMFTTASEK--RDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH- 370 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E + ++ K + + L T Sbjct: 371 --GIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421 >gi|326571308|gb|EGE21325.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC8] Length = 639 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 10/173 (5%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + ++GY E+ P +V +G + Sbjct: 254 HMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYG 313 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRD 271 + MF T + + + ++ + LPLR R+E + Sbjct: 314 EMMFTTASEK--RDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH- 370 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E + ++ K + + L T Sbjct: 371 --GIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421 >gi|114328278|ref|YP_745435.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] gi|122326764|sp|Q0BRP0|SYT_GRABC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114316452|gb|ABI62512.1| threonyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] Length = 642 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 82/316 (25%), Gaps = 29/316 (9%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R+ E + +++ K R +I + + R Q + A L Sbjct: 108 RNEPFTPEDLPAIEAKMREIIAR--NAPFEREVWDRQDAIRFFQDKGEKYKA--QLIQDL 163 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV--------PIGTSANENILIRSVGKKP 132 + I + E + +L R G Sbjct: 164 PDTETITVYRQGEWLDLCRGPHMRSTGDIGPAFRLMKVAGAYWRGDHRNAMLSRIYGTAW 223 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMID 184 + E D R K L RAL +M Sbjct: 224 RDQKELDAYLHQLEEAERRDHRRLGKEMDLFHIQEEAVGSIFWHKKGWRLYRALENYMRR 283 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----L 239 E GY EV P LV +G K+ + MF T + + + Sbjct: 284 RQI-EAGYEEVRTPQLVDRSLWEDSGHWDKYREHMFIATVEDEEKTLALKPMNCPCHVQI 342 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + H + K LPLR R E A G++R F + + E E Sbjct: 343 FRHGLRSYKELPLRMAEFGACHRYEPSGALH---GIMRVRSFTQDDAHIFCMPEQIAKET 399 Query: 300 ERMLSCAEEILKRLDL 315 ++ + + L Sbjct: 400 ADFVAMLASVYRDLGF 415 >gi|94264275|ref|ZP_01288069.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|94270245|ref|ZP_01291687.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|93450880|gb|EAT01895.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] gi|93455320|gb|EAT05527.1| Threonyl-tRNA synthetase, class IIa [delta proteobacterium MLMS-1] Length = 641 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 8/165 (4%) Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 + G + A L R + + H +HGY + P + R E +G + Sbjct: 256 TIQEQIGPGLILWQPKGALLRRLIEDYWRQQH-YQHGYDLLYTPHIARRELWQTSGHLDF 314 Query: 215 FADDM---FCTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 + D+M D ++ + LY + PLR+ L +R E A Sbjct: 315 YGDNMFAGMDIEDVQYQLKPMNCPFHIALYKTRKRSYREFPLRWCELGTVYRFEKTGALH 374 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + R E E R+L +LK Sbjct: 375 ---GLMRVRGFTQDDAHIFCRPEQLEDEIYRILDFNLHVLKAFGF 416 >gi|257139340|ref|ZP_05587602.1| threonyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 593 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + GY E+ P+++ +G Sbjct: 245 LDLFHIQEEAPGMVFWHPKGWTLWQRVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHW 304 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 305 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 362 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E+ +E A + + Sbjct: 363 ALH---GLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYEDFGF 407 >gi|94986656|ref|YP_594589.1| threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] gi|122988800|sp|Q1MRV8|SYT_LAWIP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94730905|emb|CAJ54268.1| Threonyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 642 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 63/164 (38%), Gaps = 7/164 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + L L F+ H + GY V P L+R E +G + ++M Sbjct: 256 IAPGMVFWQPNGMLLRTILEDFLRKEHL-KRGYQLVQGPQLLRRELWEKSGHYTNYKENM 314 Query: 220 FCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + T D + P + VS LY + + LP R+ L R E G+L Sbjct: 315 YFTEIEEDVYGIKPMNCVSHMLLYKTHLHSYRELPQRYFELGVVHRHEKSGVLH---GLL 371 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 R QF + + I E E ++++ +++ D +Y +V Sbjct: 372 RVRQFTQDDAHIICMPEQLEEEIIQVITFVRDLMSLFDFNYHIV 415 >gi|326570601|gb|EGE20637.1| threonyl-tRNA synthetase [Moraxella catarrhalis BC7] Length = 639 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 10/173 (5%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + ++GY E+ P +V +G + Sbjct: 254 HMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYG 313 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRD 271 + MF T + + + ++ + LPLR R+E + Sbjct: 314 EMMFTTASEK--RDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH- 370 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E + ++ K + + L T Sbjct: 371 --GIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421 >gi|326563502|gb|EGE13765.1| threonyl-tRNA synthetase [Moraxella catarrhalis 103P14B1] gi|326573810|gb|EGE23767.1| threonyl-tRNA synthetase [Moraxella catarrhalis 101P30B1] Length = 639 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 10/173 (5%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + ++GY E+ P +V +G + Sbjct: 254 HMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYG 313 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRD 271 + MF T + + + ++ + LPLR R+E + Sbjct: 314 EMMFTTASEK--RDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH- 370 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E + ++ K + + L T Sbjct: 371 --GIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421 >gi|326409092|gb|ADZ66157.1| threonyl-tRNA synthetase [Brucella melitensis M28] Length = 660 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 113 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 172 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 173 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 232 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 233 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 292 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+ P ++ +G + D+MF L P + ++ Sbjct: 293 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 352 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 353 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 409 Query: 301 RMLSCAEEILKRLDL 315 ++ + K Sbjct: 410 QINDHILSVYKDFGF 424 >gi|296113663|ref|YP_003627601.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4] gi|295921357|gb|ADG61708.1| threonyl-tRNA synthetase [Moraxella catarrhalis RH4] Length = 639 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 10/173 (5%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + ++GY E+ P +V +G + Sbjct: 254 HMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYG 313 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRD 271 + MF T + + + ++ + LPLR R+E + Sbjct: 314 EMMFTTASEK--RDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH- 370 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E + ++ K + + L T Sbjct: 371 --GIMRVRGFTQDDAHIFCTNAQIRQEALNFIKLTLDVYKDFGFDHIQMKLST 421 >gi|225016667|ref|ZP_03705859.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum DSM 5476] gi|224950631|gb|EEG31840.1| hypothetical protein CLOSTMETH_00576 [Clostridium methylpentosum DSM 5476] Length = 646 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 92/268 (34%), Gaps = 47/268 (17%) Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT-SEV 234 + Q ++ + GY P + + +G + + MF D + Sbjct: 275 IQILQRFVEDEEEKRGYLLTKTPYFAKSDFYKISGHWQHYREGMFVMGDEEKDKEVFALR 334 Query: 235 SLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 +T Y +E+ + LPLR+ + FR+EA + G++R QF E Sbjct: 335 PMTCPFQFQAYLNEMRSYRDLPLRYNETSTLFRNEASG---EMHGLIRVRQFTISEGHLA 391 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYR 348 R + E ++ L A+ +L+ L L V + D E W QNL R Sbjct: 392 CRPDQVEEEFKQCLELAKFMLETLGLDEDVTYRFSKWDENNRDKYIGSAEEWENVQNLMR 451 Query: 349 ----------------------------------EISSCSTCGNFQ-SRRMNSRYRDPNS 373 E + + +FQ + R + Y D + Sbjct: 452 GILNHLELDYTEADGEAAFYGPKLDIQIKNVYGKEDTLITIQIDFQLASRFDMVYTDTDG 511 Query: 374 KSLKFTHTLNGSGV-AVGRCLIAILENY 400 + K+ + ++ + + R L +LE Y Sbjct: 512 QK-KYPYVIHRTSLGCYERTLALLLEKY 538 >gi|225852573|ref|YP_002732806.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|256263936|ref|ZP_05466468.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|254783511|sp|C0RJ44|SYT_BRUMB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225640938|gb|ACO00852.1| threonyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|263094080|gb|EEZ18002.1| threonyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] Length = 658 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 111 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 171 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 231 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+ P ++ +G + D+MF L P + ++ Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 407 Query: 301 RMLSCAEEILKRLDL 315 ++ + K Sbjct: 408 QINDHILSVYKDFGF 422 >gi|119774900|ref|YP_927640.1| threonyl-tRNA synthetase [Shewanella amazonensis SB2B] gi|166225496|sp|A1S6G4|SYT_SHEAM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119767400|gb|ABL99970.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella amazonensis SB2B] Length = 642 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + I SE+ Y EV P ++ +G Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWSIFRELETFIRHKLSEYDYQEVKGPFMMDRVLWERSGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 311 DKYADAMFTTASENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + + VV L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVQEEVSACIRMVYDTYSTFGFENIVVKLSTR---- 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + D ++W ++ E Sbjct: 424 PEKRIGDDDMWDRAESALIE 443 >gi|288959315|ref|YP_003449656.1| threonyl-tRNA synthetase [Azospirillum sp. B510] gi|288911623|dbj|BAI73112.1| threonyl-tRNA synthetase [Azospirillum sp. B510] Length = 650 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 55/203 (27%), Gaps = 8/203 (3%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 R + + +H E + + D A SV Sbjct: 219 QRIYGTAWRDEKELKAYLHQIEEAEKRDHRKLGKELDLFHVQEEAVGSVFWHPKGWTLYR 278 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 + I Y EV P L+ +G + D+MF + Sbjct: 279 TLETYIRTKLKAADYVEVKTPQLIDSSLFKASGHWDMYGDNMFKVEADGGEKLLGIKPMN 338 Query: 238 N-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 ++ + + + LP+R R+E A G++R F + + E Sbjct: 339 CPGHVQIFRNGLRSYRDLPIRMAEFGACHRNEPSGALH---GIMRVRAFTQDDAHIFCTE 395 Query: 293 EDSFTEHERMLSCAEEILKRLDL 315 + +E + K L Sbjct: 396 DQVQSEAAEYFKLQLGVYKDLGF 418 >gi|258404181|ref|YP_003196923.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] gi|257796408|gb|ACV67345.1| threonyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] Length = 649 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 72/190 (37%), Gaps = 7/190 (3%) Query: 150 LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 +D ++ +G + A + L F H GY V P L+R E + Sbjct: 248 QLDLFSFSEEAGPGMPLWHPKGALIRTILEDFSRKEHL-RRGYQLVQGPTLLRQELWQRS 306 Query: 210 GQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 G + ++M+ T + P + ++ +Y+ +I + LP+R+ L R E Sbjct: 307 GHYDNYRENMYFTEIDDQAYGIKPMNCLAHMLIYNTKIRSYRDLPIRYFELGTVHRHEKS 366 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 G+LR QF + + + R + E +++ +++L Y V + Sbjct: 367 GVLH---GLLRVRQFTQDDAHILCRPDQLQDEISKIVRFVQDVLGLFGFDYEVEISTRPE 423 Query: 327 LGFSACKTYD 336 + +D Sbjct: 424 KSIGSDDAWD 433 >gi|160900048|ref|YP_001565630.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1] gi|238687213|sp|A9C3D4|SYT_DELAS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160365632|gb|ABX37245.1| threonyl-tRNA synthetase [Delftia acidovorans SPH-1] Length = 643 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 52/158 (32%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV P ++ TG K+ ++MF Sbjct: 262 HSPGTVFWHPKGWSLWQEVEQYMRRVYRDNGYQEVKGPQILDKTLWEKTGHWDKYRENMF 321 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T L P + ++ I + LPLR+ R+E G++R Sbjct: 322 TTESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLH---GIMR 378 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E + +++ Sbjct: 379 VRGFTQDDGHVFCTEDQIQPEVLAFTTLLQKVYADFGF 416 >gi|326538797|gb|ADZ87012.1| threonyl-tRNA synthetase [Brucella melitensis M5-90] Length = 661 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 114 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 173 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 174 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 233 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 234 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 293 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+ P ++ +G + D+MF L P + ++ Sbjct: 294 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 353 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 354 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 410 Query: 301 RMLSCAEEILKRLDL 315 ++ + K Sbjct: 411 QINDHILSVYKDFGF 425 >gi|187477891|ref|YP_785915.1| threonyl-tRNA synthetase [Bordetella avium 197N] gi|123738749|sp|Q2L2M5|SYT_BORA1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115422477|emb|CAJ49002.1| threonyl-tRNA synthetase [Bordetella avium 197N] Length = 650 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 64/208 (30%), Gaps = 6/208 (2%) Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + ++ + +H+ E D D + Sbjct: 213 DSNNEMLQRIYGTAWATKDEQDAYLHMLEEAERRDHRKIGRDLDLFHFQDEGPGLIFWHP 272 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 + + ++GY EV AP ++ TG + ++MF T + Sbjct: 273 KGWTLWQQVEQYMRAVYRDNGYQEVKAPQILDLSLWKKTGHWDNYRENMFTTESENRVYG 332 Query: 231 TSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 ++ +++ + + LPLR+ R+E + GM+R F + + Sbjct: 333 LKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLH---GMMRVRGFTQDDGH 389 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDL 315 E+ E + +++ + Sbjct: 390 IFCTEDQLQDECADFTALLQKVYRDFGF 417 >gi|326562776|gb|EGE13071.1| threonyl-tRNA synthetase [Moraxella catarrhalis 46P47B1] gi|326563180|gb|EGE13448.1| threonyl-tRNA synthetase [Moraxella catarrhalis 12P80B1] Length = 639 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 52/173 (30%), Gaps = 10/173 (5%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + ++GY E+ P +V +G + Sbjct: 254 HMQEQAPGMVFWHPNGWTIWQVLEQYMRKVQKDNGYLEIKTPQIVDRSLWEKSGHWDNYG 313 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRD 271 + MF T + + + ++ + LPLR R+E + Sbjct: 314 EMMFTTASEK--RDYAIKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH- 370 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + +E + ++ K + + L T Sbjct: 371 --GIMRVRGFTQDDAHIFCTNAQIRSEALNFIKLTLDVYKDFGFDHIQMKLST 421 >gi|167836852|ref|ZP_02463735.1| threonyl-tRNA synthetase [Burkholderia thailandensis MSMB43] Length = 635 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 51/168 (30%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + GY E+ P+++ +G Sbjct: 250 LDLFHLQEESPGMVFWHPKGWTLWQQVEQYMRRRLDAAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + + H + + LPLR+ R+EA Sbjct: 310 QNYRENMFTTESEK--RDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E+ +E A + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQINSEAIAFNKLAMSVYADFGF 412 >gi|163795474|ref|ZP_02189441.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199] gi|159179460|gb|EDP63991.1| Threonyl-tRNA synthetase [alpha proteobacterium BAL199] Length = 640 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 50/169 (29%), Gaps = 7/169 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A SV + + I E GY E+ P L+ +G Sbjct: 249 RELDLFHIQEEAVGSVFWHPKGWTLYRVIENYIRGRLEEGGYREIKTPQLIDRALWEASG 308 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEII----ESKSLPLRFTTLAPSFRSEAG 266 KF + MF + + + + LPLR R+E Sbjct: 309 HWDKFREAMFTANAEDDKVLALKPMNCPGHVQVYKQGLKSYRDLPLRLAEFGSCHRNEPS 368 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E+ +E R + + + Sbjct: 369 GALH---GIMRVRAFTQDDAHIFCTEDQITSESIRFCDLLKSVYRDFGF 414 >gi|57239615|ref|YP_180751.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58579605|ref|YP_197817.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|73919788|sp|Q5H9Z4|SYT_EHRRW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|57161694|emb|CAH58624.1| threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58418231|emb|CAI27435.1| Threonyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 633 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 91/315 (28%), Gaps = 38/315 (12%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 S + ++EK R +IKK E + I +G V + ++ Sbjct: 112 FSSNELEKIEEKMREIIKKNESFIREVWTREEAIRFFSNKGEDYKV--------KIIAKI 163 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 PI E S L I + + S + + + + Sbjct: 164 PIHENITVYKQGSFIDL---CRGPHAPSTKISKAFKLTKVSGSYWEGNTNNAQLQRIYGT 220 Query: 145 GEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 + + + A + + + + I Sbjct: 221 AWRTEEELKLYLNNLIEVEKRDHRKIGKELELFHIQNEALGQIFWHEKGLIIYRIIENYI 280 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLY 240 +GY EV P L+ +G KF + MF + ++ ++ ++ Sbjct: 281 RKKLENNGYIEVKTPYLLSKTLWEQSGHWDKFREHMFLSEIDNKVVAIKPMNCPCHVQIF 340 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + +I K LPLR R E+ A G++R F + + E+ E Sbjct: 341 NSKIRSYKDLPLRMAEFGTCHRYESSGALH---GLMRVRSFTQDDAHIFCTEDQIIEEAL 397 Query: 301 RMLSCAEEILKRLDL 315 + + E+ + Sbjct: 398 KFCNLLMEVYEVFGF 412 >gi|332525938|ref|ZP_08402079.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] gi|332109489|gb|EGJ10412.1| threonyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] Length = 635 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV P ++ TG K+ ++MF Sbjct: 258 HSPGTVFWHPKGWTVWQEVEQYMRRVYRDNGYQEVKGPQILDKALWEKTGHWDKYRENMF 317 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T L P + ++ I + LPLR+ R+E G++R Sbjct: 318 TTESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPTGGLH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E + +++ + Sbjct: 375 VRGFTQDDGHIFCTEDMILGECVAYTALLQKVYRDFGF 412 >gi|219113189|ref|XP_002186178.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583028|gb|ACI65648.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 684 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + +G + + R + F D H + GY V +P + + Sbjct: 277 KKLDLFSIQEDAGGGLVFWHPKGSKVRRMIEDFWKDAHIQD-GYDVVYSPHIANIDLWKT 335 Query: 209 TGQIP----KFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 +G D M + + P + +Y E+ + LP R+ L +R E Sbjct: 336 SGHFDFYRADMFDQMDVENEQYQIKPMNCPFHCLMYKDELRSYRDLPFRWAELGTVYRYE 395 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E +L E IL R Sbjct: 396 RSG---TLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLTETILSRFGF 443 >gi|296114661|ref|ZP_06833313.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295978757|gb|EFG85483.1| threonyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 603 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 95/328 (28%), Gaps = 56/328 (17%) Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 I +A + + ++ R+H +G + L F A +V Sbjct: 178 RIHGTACRDANELAAWERRQEEAARRDHRRLGREMDLFHFQ-----PEAPGAVFWHPNGW 232 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIP 230 + Y E++ P ++ +G KF ++MF T L P Sbjct: 233 TLFQTLLAYLRARQQAENYVEINTPDIMDLSLWQASGHWEKFGENMFTTETEGRTYALKP 292 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + ++ H + + LPLR R E A G++R F + + Sbjct: 293 MNCPGGVQVFRHGLKSYRDLPLRMAEFGKVHRFEPSGALH---GLMRVRAFTQDDAHIFC 349 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR-- 348 E E +R+ I K + + E+W + R Sbjct: 350 TPEQMEAETQRICHLVLSIYKDFGFDDVRIKFSDR----PEKRVGSDEIWDRSEEALRRG 405 Query: 349 -EISSCSTC----------------------GNFQS----------RRMNSRYRDPNSKS 375 E S S ++Q +R+++ Y + Sbjct: 406 VEASGLSYTRNPGEGAFYGPKLEFVLRDAIGRDWQCGTVQVDLNLPQRLDAHYIGADGDK 465 Query: 376 LKFT--H-TLNGSGVAVGRCLIAILENY 400 H L GS R + +LE++ Sbjct: 466 HPPVMLHRALFGSL---ERFIGILLEHH 490 >gi|319778289|ref|YP_004129202.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9] gi|317108313|gb|ADU91059.1| Threonyl-tRNA synthetase [Taylorella equigenitalis MCE9] Length = 646 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 95/343 (27%), Gaps = 37/343 (10%) Query: 45 EDIRARRNSNSAQIGQAIAE-----GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 ED++ S + Q IA ++ K E K ++ + + + Sbjct: 120 EDLQKIEKRMSELVKQDIAVIREEWDRDEAIEFFKKEGELYKAEIISSIPQGEVISLYRQ 179 Query: 100 KLISCIPNVPL----------------------EEVPIGTSANENILIRSVGKKPSAIHL 137 + P + S + + + Sbjct: 180 GSFVDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSNNEMLQRVYGTAWSSKDDQVKYLTM 239 Query: 138 SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 E + + D A + + + E+GY E+ A Sbjct: 240 LEEAEKRDHRKLGKELDLFHFQDEAPGLIFWHPKGWTIWQQVEQFMRKVYVENGYQEIKA 299 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 P ++ TG + ++MF T L P + +Y+ + + LP+R+ Sbjct: 300 PQILDLGLWKKTGHWDNYKENMFTTQSENREYGLKPMNCPGHVQIYNSTLHSYRELPIRY 359 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 R+E + GM+R F + + E+ E + +++ K Sbjct: 360 GEFGQCHRNEPSGSLH---GMMRVRGFTQDDGHIFCTEDQLLAECLAFTALLQKVYKEFG 416 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 + + T + E+W + E S C Sbjct: 417 FTEVLYKIATR----PEKRIGADEIWDKAEKALMESLKQSGCE 455 >gi|332184284|gb|AEE26538.1| Threonyl-tRNA synthetase [Francisella cf. novicida 3523] Length = 634 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 98/327 (29%), Gaps = 42/327 (12%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + ++ + + ++ K + K ++ +E + Sbjct: 119 AIEKKMKELAKKSTPVSYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQVKIYTQDNFSD 178 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------------REHFEIGEALG 149 + + + L + + S + ++ + E Sbjct: 179 LCRGPHIPNTSVLKAFKLTKLAGAYWRGNSNNEMLTRIYGTCWATKEDLDQYLNMLEEAE 238 Query: 150 LMDFDRATKLSGARFS--------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 D + K+ + + R + +M + +++G +E+ PL+ Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASN-NKYGCSEIRTPLIA 297 Query: 202 RDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +G K+A++MF T + P + + +Y+ ++ + LP+R Sbjct: 298 DFSLWEKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFG 357 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+E + G+LR F + + E E M+ E+ K + Sbjct: 358 IVHRNEPSGSLH---GLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDF 414 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQN 345 V + + D E W + Sbjct: 415 AVKIALR----PENRIGDDETWDKSEQ 437 >gi|110598676|ref|ZP_01386941.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] gi|110339729|gb|EAT58239.1| threonyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] Length = 657 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 56/377 (14%), Positives = 104/377 (27%), Gaps = 52/377 (13%) Query: 21 RHLEPQSEYILS--LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 R E I L+ R + E++ + SA I + N + ET Sbjct: 120 RFREEDLRLIEQKMLEISKRDSKIQREEL-----TRSAAIEFFKNKRNDPYKVEILEET- 173 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPL-------EEVPIGTSANENILIRSVGKK 131 LK+ + + + ++ + R G Sbjct: 174 -LKDVDTVSLYHQDGFTDLCTGPHLPTTSKVKAVLLTNISSSYWRGDSSREQMQRIYGIT 232 Query: 132 PSAIHLSREHFEIGEALGLMDFDR-----------ATKLSGARFSVLTGHLAHLERALGQ 180 + +E+ + E D + A SG + G + E + Sbjct: 233 FPSDKQLKEYVTLLEEAKRRDHRKLGAELELFMLSAEVGSGLPIWLPKGAIIRNE---LE 289 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV----SL 236 + + GY V P + E +G P ++D F E + Sbjct: 290 SFLKEEQRKRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPLTYHDEEGRKEQYLLKPM 349 Query: 237 TNLYSH-----EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 + H ++ + LP+R T +R E + G++R F + + R Sbjct: 350 NCPHHHLIYSSKMRSYRDLPIRLTEFGTVYRHEQSG---ELNGLVRARGFTQDDSHIYCR 406 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 + E + + + L + L D EVW + +E Sbjct: 407 PDQLVDEICSAIELTQFVFGTLGFNDVQTRLSMHDPENQTKYGGTAEVWAQAEKDVKEA- 465 Query: 352 SCSTCGNFQSRRMNSRY 368 + RM Y Sbjct: 466 ---------ADRMGIEY 473 >gi|262394487|ref|YP_003286341.1| threonyl-tRNA synthetase [Vibrio sp. Ex25] gi|262338081|gb|ACY51876.1| threonyl-tRNA synthetase [Vibrio sp. Ex25] Length = 642 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 97/344 (28%), Gaps = 37/344 (10%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PI 86 + LDE + +E I R + + + + D ++ K ++ Sbjct: 107 IDLDESL--TQEDLEKIEKRMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDEN 164 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE------ 140 + +++ ++ I + + + + + S + + Sbjct: 165 VSRDDRPGLYHHEEYIDMCRGPHVPNMSFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAF 224 Query: 141 --------HFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------L 185 H E D + K + D Sbjct: 225 HDKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRA 284 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSH 242 E+GY EV PL++ +G K+AD MF T + P + +++ Sbjct: 285 KLDEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQ 344 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LPLR R+E A G++R F + + E E Sbjct: 345 GLKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTNC 401 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + + VV L T + E+W + Sbjct: 402 IKMVYDTYQTFGFDNIVVKLSTR----PEKRVGSDEIWDQSEEA 441 >gi|254579094|ref|XP_002495533.1| ZYRO0B13596p [Zygosaccharomyces rouxii] gi|238938423|emb|CAR26600.1| ZYRO0B13596p [Zygosaccharomyces rouxii] Length = 454 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 9/160 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + + L QFM ++G+ EV PL+ R +G + +DM Sbjct: 49 ISPGSIFFLPNGTKIFNKLIQFMKLQQQFKYGFKEVVTPLIYRKSLWEQSGHWDNYKEDM 108 Query: 220 FCTTDG------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 F L P + ++ LPLR + +P R+EA A Sbjct: 109 FRVEGHDTSKEEYGLKPMNCPGHCMVFKRFDRSYSELPLRLSDFSPLHRNEASGALS--- 165 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 G+ R +F + + + +E + L + ++ Sbjct: 166 GLTRVRKFHQDDGHIFCTPDQVESEIAKCLKLVDMCYTKV 205 >gi|116492462|ref|YP_804197.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|122266074|sp|Q03GB7|SYT_PEDPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116102612|gb|ABJ67755.1| Ser-tRNA(Thr) hydrolase [Pediococcus pentosaceus ATCC 25745] Length = 648 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 125/354 (35%), Gaps = 34/354 (9%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 + + +D + + + ++++K + +IK ++ S + +A+A + Sbjct: 107 DTDKVDQQI-------SVDQLPAIEDKMKDIIKSKISLKHS--EISVE--EALASVDGDP 155 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA-NENILIRSV 128 A + + ++ + + + + S L+S ++ + + + + Sbjct: 156 YQAKIVKRNEKNGKVSVYDVDGKIIVSDNVALLSTSDMKAVKLLSVAGAYWEGKSSNPML 215 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF-------------SVLTGHLAHLE 175 + ++ E +R ++ G + A + Sbjct: 216 QRIYGTSFYKQKDLEAELERQKEAHERDHRVIGNNLDLFFVDPKVGAGLPYWMPNGATIR 275 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIP 230 R++ +++ID +HGY V P+L+ +A +G + +DMF D L P Sbjct: 276 RSIERYIIDKEV-KHGYQHVYTPVLMNLDAYKTSGHWQHYREDMFPPMDMGDGEMLELRP 334 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + S +Y H I + LP+R L R E A G+ R + + + Sbjct: 335 MNCPSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFV 391 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + E +++L E+ + ++ L D + D E+W Q Sbjct: 392 APDQIQAEFKKVLQLMVEVYRDFNITDYTFRLSYRDPANTEKYFDDDEMWNKSQ 445 >gi|307822740|ref|ZP_07652971.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307736344|gb|EFO07190.1| threonyl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 635 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 61/197 (30%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + I +GY EV P +V +G Sbjct: 250 LDLFHSQEEAPGMVFWHEKGWVIYQQVEQYIREKLRVNGYGEVKTPQVVDRSLWERSGHW 309 Query: 213 PKFADDMFCTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF D +F T + + I +Y+ + + LP+R R+E Sbjct: 310 EKFGDMIFTTHSENRDYAIKPMNCPCHVQIYNQGLKSYRDLPIRLAEFGSCHRNEPSG-- 367 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E E + ++ K ++ L T Sbjct: 368 -TLHGLMRVRNFVQDDAHIFCTEGQIQDEVSTFIDMLFDVYKDFGFEEVIIKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 A + D VW +N Sbjct: 423 PANRVGDDSVWDKAENA 439 >gi|70725135|ref|YP_252049.1| threonyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|68445859|dbj|BAE03443.1| threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) [Staphylococcus haemolyticus JCSC1435] Length = 638 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 105/324 (32%), Gaps = 27/324 (8%) Query: 23 LEPQSEY------ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 + + + ++++ + + E+++ R + S + I + N ++ L E Sbjct: 108 YDIDLDESISEADLNKIEKEMKKIHS--ENLKFERQNLSYAEAKNIFKDNPYKLE-LIEE 164 Query: 77 TSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 + L + K ++ + +++ +L R G Sbjct: 165 HKDDQLSLYQQGEFIDLCVGPHVPSTKFVNHFKLTKVSGAYWRGNSDNKMLQRIYGVAFR 224 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDL 185 + ++FE + R K + + + F+ ++ Sbjct: 225 SKDQLDDYFEFLREAEERNHRRLGKQLKLFMFSEEAPGMPFYLSNGQFIRNQMENFLREV 284 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSH 242 +H Y EV PL++ +G + ++M+ T + L P + ++ + Sbjct: 285 QL-KHDYDEVRTPLMMNKRLWEESGHWDHYHENMYFTKVDENDYALKPMNCPGHMLIFKN 343 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 E+ K LPLR R E A G+LR F + + + +E + + Sbjct: 344 ELRSYKDLPLRIAEFGQVHRHEFSGAL---NGLLRVRTFCQDDAHIFIMKSQIKSEVQEI 400 Query: 303 LSCAEEILKRLDLHYRVVSLCTGD 326 L + I Y + D Sbjct: 401 LKLIDYIYSVFGFEYSIELSTRPD 424 >gi|127512960|ref|YP_001094157.1| threonyl-tRNA synthetase [Shewanella loihica PV-4] gi|166225499|sp|A3QEK0|SYT_SHELP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126638255|gb|ABO23898.1| threonyl-tRNA synthetase [Shewanella loihica PV-4] Length = 642 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 52/167 (31%), Gaps = 6/167 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + I ++ Y EV PL++ +G Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWSLFLELERFIRQKLGQYTYQEVKGPLMMDRVLWERSGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+++ MF T ++ +++ + + LPLR R+E + Sbjct: 311 DKYSEAMFTTHSENREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 G++R F + + EE E + + H Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQVQQEVSGCIKMVYDTYATFGFH 414 >gi|305664305|ref|YP_003860593.1| tRNA synthetase class II (G H P and S) [Ignisphaera aggregans DSM 17230] gi|304378874|gb|ADM28713.1| tRNA synthetase class II (G H P and S) [Ignisphaera aggregans DSM 17230] Length = 532 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 73/199 (36%), Gaps = 29/199 (14%) Query: 218 DMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA-PSFRSEAGSAGRDTRGML 276 + +L + +EI++ +SLP+++ + PS+R E+G G+ Sbjct: 293 QKYLKPPSYFLCFAQCEPFYWFFENEILDDESLPIKWYDHSGPSYRWESGG----IHGIE 348 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT------------ 324 R +F + E+V + + E +L+ E + ++ ++ T Sbjct: 349 RVIEFHRIEVVWLGKPEQVIEIRNELLNKYEYFMDKVLDLEWRMAWVTPWYYEQTGITQK 408 Query: 325 GDLGFSACKTYDLEVWLAGQN------LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 ++ T D E WL + + EI + S G + ++ + Sbjct: 409 VEMDIDRPGTIDFEAWLPYRGPRDDNKNWLEIGNISIHGTKFTESFRIKH-----NRGEI 463 Query: 379 THTLNGSGVAVGRCLIAIL 397 T SG R LIA+L Sbjct: 464 LWT-GCSGFGSERWLIALL 481 >gi|73919786|sp|Q83C10|SYT_COXBU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 651 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + +V + I T ++GY EV P L+ +G + Sbjct: 250 MDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDASLWDKSGHL 309 Query: 213 PKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DD+F + P S + +++ + + LPLR+ R+E Sbjct: 310 EKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYRDLPLRYAEFGACHRNEPSG-- 367 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + E+ + L T Sbjct: 368 -TLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADFGFTEVIHKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + EVW + E Sbjct: 423 PEKRVGSDEVWTKAEQALAE 442 >gi|293392211|ref|ZP_06636545.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952745|gb|EFE02864.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 643 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E + Sbjct: 311 QNYGDLMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + + +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCMPDQVESEVTSCIKMVYDIYSTFGFENIKVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PEKRIGSDEMW 434 >gi|215919162|ref|NP_820316.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493] gi|206584046|gb|AAO90830.2| threonyl-tRNA synthetase [Coxiella burnetii RSA 493] Length = 660 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + +V + I T ++GY EV P L+ +G + Sbjct: 259 MDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDASLWDKSGHL 318 Query: 213 PKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DD+F + P S + +++ + + LPLR+ R+E Sbjct: 319 EKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYRDLPLRYAEFGACHRNEPSG-- 376 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + E+ + L T Sbjct: 377 -TLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADFGFTEVIHKLSTR---- 431 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + EVW + E Sbjct: 432 PEKRVGSDEVWTKAEQALAE 451 >gi|27904622|ref|NP_777748.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29839437|sp|P59554|SYT_BUCBP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|27904019|gb|AAO26853.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 643 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 58/166 (34%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + + + +I + ++ Y EV P+++ + +G + Sbjct: 252 LDLYHIQEDLPGMIFWHRNGWIVFQELKKLIRVKLRKYNYQEVKTPVMMNKKIWKDSGHL 311 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + MF + ++ +++H + + LP+R + R+E A Sbjct: 312 DNYKESMFMVCSSNFEYGIKPMNCPGHVQIFNHVVRSYRDLPIRISEFGSCHRNEPSGAL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + RE+ +E + EI K Sbjct: 372 H---GLMRIRNFTQDDAHIFCREDQICSEVSNCIRMVYEIYKIFGF 414 >gi|269216980|ref|ZP_06160834.1| threonine--tRNA ligase [Slackia exigua ATCC 700122] gi|269129787|gb|EEZ60871.1| threonine--tRNA ligase [Slackia exigua ATCC 700122] Length = 587 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 7/163 (4%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G F + L+ +L Q+ +D+ +GY +V P+++ +G + ++M+ Sbjct: 211 GPGFPFWLPNGMRLKNSLMQYWMDMQ-DAYGYEQVDTPIILNKSLWETSGHWDHYKENMY 269 Query: 221 CTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + P + +Y + + LPL+ R E A G+ R Sbjct: 270 TTEIDGEEYAVKPMNCPGACLIYKSKPRSYRDLPLKLAEAGKDHRHELKGALH---GLFR 326 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 F + + R + + ++ YRV Sbjct: 327 VRAFTQDDAHLFIRPDQITEQVTDTAHLISTYYEQFGFPYRVE 369 >gi|269114879|ref|YP_003302642.1| threonyl-tRNA synthetase (threonine-tRNAligase, thrRS) [Mycoplasma hominis] gi|268322504|emb|CAX37239.1| Threonyl-tRNA synthetase (Threonine-tRNAligase, ThrRS) [Mycoplasma hominis ATCC 23114] Length = 579 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 77/226 (34%), Gaps = 18/226 (7%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 +L G F + A+ +++ + G+ EV P + +G + Sbjct: 194 NQLGGQGFPFWLEDGMKIHNAIRDYVL-KLDKKFGFREVLTPHFGEKKLYEISGHWAHYQ 252 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 D MF + + + K LP+R++ + +R EA A Sbjct: 253 DTMFAPIKMDNETLVARPMTCPHHIILFNSTRRSYKDLPIRYSEQSRLYRYEASGALS-- 310 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 G+ R E R + +E + + + LK ++ +SL D + Sbjct: 311 -GLERVRGMDLTEGHIFVRPDQIRSEFKHLYKMILQALKDFNIEIDHISLSLRDPQDTQK 369 Query: 333 KTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 + E+W +N RE+ +N +Y++ ++ + Sbjct: 370 FFQNDEMWNKAENDLREVLG----------ELNIKYKEFIGEAAFY 405 >gi|261867949|ref|YP_003255871.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413281|gb|ACX82652.1| threonyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 643 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E + Sbjct: 311 QNYGDLMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + + +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCMPDQVESEVTSCIKMVYDIYSTFGFENIKVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PEKRIGSDEMW 434 >gi|325276812|ref|ZP_08142513.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51] gi|324098050|gb|EGB96195.1| threonyl-tRNA synthetase [Pseudomonas sp. TJI-51] Length = 640 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+GY E+ P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRILWERSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T+ + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTSSESRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ K + L T Sbjct: 370 H---GIMRVRGFVQDDAHIFCTEEQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 A + E+W + Sbjct: 423 PAKRVGSEELWDRAEGA 439 >gi|220931402|ref|YP_002508310.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168] gi|219992712|gb|ACL69315.1| Threonyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 646 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 116/370 (31%), Gaps = 48/370 (12%) Query: 42 KKIEDIRARRNSNSAQ---IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 +E I + I + + + +K + K +L ++++ Sbjct: 117 SDLEKIEKEMEKIIKEDLPIKKEMVS-RDEALKLMKEKGEIYKVELIEELEDDYVSLYHQ 175 Query: 99 KKLISCIPNVPLEEV--------------PIGTSANENILIRSVGKKPSAIHLSREHFEI 144 + I L N +L R G EH ++ Sbjct: 176 GEFIDLCRGPHLPSTGKVKAFKLLNAAGAYWRGDENNKMLQRIYGTAFQKKKQLEEHLKM 235 Query: 145 GEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 E D ++ + G +L A + + L +F+ D + GY Sbjct: 236 LEEAKKRDHNKLGRELDLFMTEESIGQGLPLLKPKGAKVVQILQRFVEDEE-EKRGYQLT 294 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSHEIIESKS 249 P + + + +G + +DMF + L P + +Y+ ++ + Sbjct: 295 KTPYMAKSDLYKISGHWDHYKEDMFILGDEEKDDEVLALRPMTCPFQFMIYNSKLRSYRD 354 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LPLR++ + FR+EA + G++R QF E I E E +++ + Sbjct: 355 LPLRYSETSTLFRNEASG---EMHGLIRVRQFTISEGHIICTPEQLEEEFRGVVNLINYM 411 Query: 310 LKRLDLH-YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 ++ L + D + W Q+ + + ++N Y Sbjct: 412 METLGIEDDIWYRFSKWDPDNREKYIDNPTAWEESQDKMK------NILD----KLNIDY 461 Query: 369 RDPNSKSLKF 378 + ++ + Sbjct: 462 VEAEGEAAFY 471 >gi|54298706|ref|YP_125075.1| threonyl-tRNA synthetase [Legionella pneumophila str. Paris] gi|73919801|sp|Q5X1H3|SYT_LEGPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|53752491|emb|CAH13923.1| Threonyl tRNA synthetase [Legionella pneumophila str. Paris] Length = 637 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 6/156 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-- 220 V + + + GY E+ P LV +G F D+MF Sbjct: 260 PGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMFVT 319 Query: 221 CTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 T + + + +Y+H + + LPLR + R E A G++R Sbjct: 320 ETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALH---GLMRVR 376 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + E+ +E ML + + K Sbjct: 377 NMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDFGF 412 >gi|114769524|ref|ZP_01447150.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255] gi|114550441|gb|EAU53322.1| threonyl-tRNA synthetase [alpha proteobacterium HTCC2255] Length = 649 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 54/174 (31%), Gaps = 12/174 (6%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A + Q + ++GY EV+ P +V + +G Sbjct: 253 REMDLFHMQEEAPGQIFWHPNGWKIYTALQDYMRRMQDKNGYVEVNTPQVVDRKLWEASG 312 Query: 211 QIPKFADDMFCT----TDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSF 261 K+ ++MF R + + +I + LPLR Sbjct: 313 HWEKYQENMFIVEVDEDHAREKAVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCN 372 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R E A G++R F + + EE +E + + + K L Sbjct: 373 RYEPSGALH---GIMRVRGFTQDDGHIFCSEEQIESETKIYIDFLSNVYKDLGF 423 >gi|297569216|ref|YP_003690560.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296925131|gb|ADH85941.1| threonyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 646 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 8/165 (4%) Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 G + A L R + + D H HGY +S P + R E +G + Sbjct: 256 TIQDQIGPGLILWQPKGALLRRLIEDYWRDEH-YRHGYELLSTPHIARRELWQTSGHLDF 314 Query: 215 FADDMFCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 + ++M+ + + + + + PLR+ L +R E A Sbjct: 315 YGENMYSPMEVEEVQYQLKPMNCPFHIAIYKTRKRSYREFPLRWCELGTVYRFEKTGALH 374 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + R + E R+L IL+ Sbjct: 375 ---GLMRVRGFTQDDAHIFCRPDHLEEEIFRILDLNLHILQAFGF 416 >gi|164685973|ref|ZP_01946163.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212218739|ref|YP_002305526.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] gi|164601497|gb|EAX33218.2| threonyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212013001|gb|ACJ20381.1| threonyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] Length = 660 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + +V + I T ++GY EV P L+ +G + Sbjct: 259 MDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDASLWDKSGHL 318 Query: 213 PKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DD+F + P S + +++ + + LPLR+ R+E Sbjct: 319 EKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYRDLPLRYAEFGACHRNEPSG-- 376 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + E+ + L T Sbjct: 377 -TLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADFGFTEVIHKLSTR---- 431 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + EVW + E Sbjct: 432 PEKRVGSDEVWTKAEQALAE 451 >gi|212212292|ref|YP_002303228.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] gi|212010702|gb|ACJ18083.1| threonyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] Length = 660 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + +V + I T ++GY EV P L+ +G + Sbjct: 259 MDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDASLWDKSGHL 318 Query: 213 PKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DD+F + P S + +++ + + LPLR+ R+E Sbjct: 319 EKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYRDLPLRYAEFGACHRNEPSG-- 376 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + E+ + L T Sbjct: 377 -TLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADFGFTEVIHKLSTR---- 431 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + EVW + E Sbjct: 432 PEKRVGSDEVWTKAEQALAE 451 >gi|54295556|ref|YP_127971.1| threonyl tRNA synthetase [Legionella pneumophila str. Lens] gi|73919803|sp|Q5WT82|SYT_LEGPL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|53755388|emb|CAH16884.1| Threonyl tRNA synthetase [Legionella pneumophila str. Lens] Length = 637 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 6/156 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-- 220 V + + + GY E+ P LV +G F D+MF Sbjct: 260 PGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMFVT 319 Query: 221 CTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 T + + + +Y+H + + LPLR + R E A G++R Sbjct: 320 ETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALH---GLMRVR 376 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + E+ +E ML + + K Sbjct: 377 NMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDFGF 412 >gi|307611592|emb|CBX01274.1| threonyl tRNA synthetase [Legionella pneumophila 130b] Length = 637 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 6/156 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-- 220 V + + + GY E+ P LV +G F D+MF Sbjct: 260 PGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMFVT 319 Query: 221 CTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 T + + + +Y+H + + LPLR + R E A G++R Sbjct: 320 ETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALH---GLMRVR 376 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + E+ +E ML + + K Sbjct: 377 NMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDFGF 412 >gi|304391869|ref|ZP_07373811.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130] gi|303296098|gb|EFL90456.1| threonyl-tRNA synthetase [Ahrensia sp. R2A130] Length = 663 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 110/350 (31%), Gaps = 30/350 (8%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDI------RARRNSNSAQIGQAIAEGNLSLVDAL 73 R E + +++K R +I++ + R + ++ +IG+ + + Sbjct: 111 DRETPFTPEDLERIEKKMREIIQRNDPFTHEVWTRDQAKAHFEKIGETYK----AELIDA 166 Query: 74 KNETSTLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK 131 E L +Q ++ S K+ + + + ++ +L R G Sbjct: 167 IPEGDNLNIYKQGEWMDLCLGPHGPSTGKIGNAFKLMSVAGAYWRGDSDNQMLSRIYGTA 226 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL------ 185 + +++ + E D + + G A G + Sbjct: 227 WADEKQLKQYLHMLEEAQKRDHRKLGREMDLFHFQEEGPGVVFWHAKGWKVFQHLVSYMR 286 Query: 186 -HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTNLY 240 EHGY EV+AP ++ +G + ++MF T + P + ++ Sbjct: 287 RRIEEHGYDEVNAPQILDKALWETSGHWGWYRENMFTTVTEDERQFAIKPMNCPGHVQIF 346 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + + + LP++ R E A G++R F + + E E Sbjct: 347 KNGLRSYRELPVKMAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHVFCTPEQLEEECL 403 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 R+ VV L T + E W + + ++ Sbjct: 404 RINDLILSTYSDFGFGDIVVKLSTR----PEKRVGSEEGWDRSEEIMGKV 449 >gi|269963856|ref|ZP_06178168.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3] gi|269831343|gb|EEZ85490.1| threonyl-tRNA synthetase [Vibrio harveyi 1DA3] Length = 655 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 97/344 (28%), Gaps = 37/344 (10%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PI 86 + LDE + +E I R + + + + D ++ K ++ Sbjct: 120 IDLDESL--TQEDLEKIEKRMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDEN 177 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE------ 140 + +++ ++ I + + + + + S + + Sbjct: 178 VSRDDRPGLYHHEEYIDMCRGPHVPNMSFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAF 237 Query: 141 --------HFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------L 185 H E D + K + D Sbjct: 238 HDKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSVFRDLEVFIRS 297 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSH 242 E+GY EV PL++ +G K+AD MF T + P + +++ Sbjct: 298 KLDEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQ 357 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LPLR R+E A G++R F + + E E Sbjct: 358 GLKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTNC 414 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + + VV L T + E+W + Sbjct: 415 IKMVYDTYQTFGFDNIVVKLSTR----PEKRVGSDEIWDQSEEA 454 >gi|255305562|ref|ZP_05349734.1| threonyl-tRNA synthetase [Clostridium difficile ATCC 43255] Length = 639 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 105/350 (30%), Gaps = 45/350 (12%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG----NLSLVDALKNETSTLKEQLPIL 87 +D +R++ + +E I A + + E ++ ++ + K +L Sbjct: 105 DIDLDHRLVPEDLEKIEAEMKKIAKE--DLKIERFELPRNEALELMREQGEDYKVELISD 162 Query: 88 EKEEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKP 132 E + + + + P N +L R G Sbjct: 163 LPESEIISFYKQGDFTDLCRGPHLPSTKKVKAVKLQSVAGAYWRGDENNKMLQRIYGTSF 222 Query: 133 SAIHLSREHFEIGEALGLMD----------FDRATKLSGARFSVLTGHLAHLERALGQFM 182 E+ + E D F + G + G E Sbjct: 223 EKNKDLEEYLHLLEEAKKRDHRKLGKELGLFMIPEEGPGFPMFLPKGMELKNELLKFWRE 282 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNL 239 I GY E+ +P+++ + +G + ++M+ + + P + Sbjct: 283 IHRKA---GYIEIESPIILNRKLWETSGHWYHYKENMYTVKIDDEDYAIKPMNCPGGLIY 339 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+ ++ + P+R L R E A + G++R F + + E E Sbjct: 340 YNSQLHSYRDFPMRVAELGRVHRHELSGALQ---GLMRVRAFTQDDSHIFMLPEQIKDEI 396 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + + + I K Y + + D E W A +N RE Sbjct: 397 KGVANLIDGIYKTFGFEYNLELSTRPE----NSMGSD-EEWEAAENGLRE 441 >gi|224541524|ref|ZP_03682063.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM 15897] gi|224525561|gb|EEF94666.1| hypothetical protein CATMIT_00694 [Catenibacterium mitsuokai DSM 15897] Length = 585 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 81/262 (30%), Gaps = 17/262 (6%) Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK--- 158 + N +L R G H ++ E D + K Sbjct: 132 CKNFKLIKHSGAYWKGDKNNKVLQRIYGVCFPTKEELEAHLQLLEEAKERDHRKLGKELG 191 Query: 159 ------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 + G + + + R L ++++ GY V P L + +G Sbjct: 192 IFMFADIVGKGLPMWLPNGFTVRRLLSDYIMNKELEL-GYEHVMTPSLGNVKLYKKSGHW 250 Query: 213 PKFADDMFCTTD----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 + DDMF + L P + +Y + + LP+R +A FR EA A Sbjct: 251 AHYKDDMFPAMELDDEAYVLRPMNCPHHMVMYKSTLHSYRDLPVRIAEIANDFRFEASGA 310 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 G+ R F + + R + E + + ++ K L D Sbjct: 311 LT---GIERARAFTQNDSHIFCRPDQIAQEFKNVAHLILDVYKDFGFKDYSFRLSLRDKN 367 Query: 329 FSACKTYDLEVWLAGQNLYREI 350 + E+W +N RE+ Sbjct: 368 NKEKYFGNDELWEKSENELREV 389 >gi|330795867|ref|XP_003285992.1| hypothetical protein DICPUDRAFT_149913 [Dictyostelium purpureum] gi|325084081|gb|EGC37518.1| hypothetical protein DICPUDRAFT_149913 [Dictyostelium purpureum] Length = 80 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 385 SGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNN 419 + A + ILENY G +T+P LRP++ N Sbjct: 8 TLAATTCVICCILENYQTE-GGITVPEPLRPFLGN 41 >gi|94676542|ref|YP_588910.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123081480|sp|Q1LT04|SYT_BAUCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94219692|gb|ABF13851.1| threonyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 642 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + I + Y EV +P+++ TG Sbjct: 251 LDLYHIQEEAPGMVFWHVDGWIIFRELETFIRSKLQTYKYQEVKSPVMIDRTLWEQTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ +F T + P + +++ +I + LPLR +R+E + Sbjct: 311 SNYAEHIFTTSSENREYCIKPMNCPGHVQIFNQQINSYRDLPLRMAEFGSCYRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + E+ Sbjct: 371 H---GLMRVRNFTQDDAHIFCTEEQVCDEINNNIKMLYEVYHTFGF 413 >gi|150015183|ref|YP_001307437.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|149901648|gb|ABR32481.1| threonyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 643 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 110/366 (30%), Gaps = 43/366 (11%) Query: 43 KIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 +E + A + + ++ +K+E ++ + E E Sbjct: 116 DLEKLEAEMQKIIKENPEISRFELPRNEALELMKDEPYKVELINDLPENEIISFYKMGDF 175 Query: 101 LISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD-------- 152 C + + L+R + +D Sbjct: 176 TDLCAGPHLMSIKSVKAIKLTRSAGAYWKGNEKNKMLTRIYGTAFLKKSDLDAFLEALEE 235 Query: 153 --------FDRATKLSGARFSVLTGHLAHLER-----ALGQFMIDLHTSEHGYTEVSAPL 199 R KL +V G + + L Q ++ + GY PL Sbjct: 236 AKKRDHNKLGRELKLFTTDENVGQGLPLLMPKGAKIVQLLQRWVEDEEEKRGYLLTKTPL 295 Query: 200 LVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTN-LYSHEIIESKSLPLR 253 + + + +G + D MF D + + +Y+ E + LPLR Sbjct: 296 MAKSDLYKISGHWDHYKDGMFVLGDEEKDDEVFALRPMTCPFQYTIYNAEQHSYRDLPLR 355 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 + + FR+EA + G++R QF + + E E + +L + ++ L Sbjct: 356 YGETSTLFRNEASG---EMHGLIRVRQFTLADGHLVVTPEQLEEEFKGVLELIQYLMGTL 412 Query: 314 DLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPN 372 + ++ + D + D + W Q+ R + +N Y + + Sbjct: 413 GIAEKITYRFSKWDPNNTEKYINDPDAWNKTQDTMR------NILDH----LNINYVEAD 462 Query: 373 SKSLKF 378 ++ + Sbjct: 463 DEAAFY 468 >gi|308233449|ref|ZP_07664186.1| threonyl-tRNA synthetase [Atopobium vaginae DSM 15829] gi|328944509|ref|ZP_08241970.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829] gi|327490910|gb|EGF22688.1| threonine--tRNA ligase [Atopobium vaginae DSM 15829] Length = 592 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 36/305 (11%) Query: 46 DIRARRNSNSAQIGQAIAE----GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 + A S + E + L+ K + E+ + + Sbjct: 72 ALEAEMKKISKE--NLKVETFELPRAQAIAFLEERGEKFKVEHIGDFPEDTRLTFYKQGE 129 Query: 102 ISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 + P +++ +L R G EH + Sbjct: 130 YVDMCTGPHVCYTKMAKAFKLTGVSGAYWKANSDNEMLTRISGVAFVTKEELAEHERLMA 189 Query: 147 ALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 D + + F + + AL + ++ + GY ++ P Sbjct: 190 EAEKRDHRKIGREMDLFMVNEAGPGFPFWLPNGMRIRNALMNYWQEMQ-EKFGYEQIQTP 248 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +++ + +G + ++M+ T + + P + +Y ++ + LPL+ Sbjct: 249 VILSRKLWETSGHWDHYKENMYTTKIDEEDFAIKPMNCPGACLVYMNKPRSYRDLPLKLA 308 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R E G+ R +F + + R + E + K+ Sbjct: 309 EAGLDHRHELKG---TLHGLFRVREFTQDDAHLFIRPDQICDEVAEVTHLITAYYKQFGF 365 Query: 316 HYRVV 320 Y+V Sbjct: 366 PYKVE 370 >gi|148358548|ref|YP_001249755.1| threonyl tRNA synthase [Legionella pneumophila str. Corby] gi|296108363|ref|YP_003620064.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] gi|166223351|sp|A5IAK9|SYT_LEGPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148280321|gb|ABQ54409.1| threonyl tRNA synthase [Legionella pneumophila str. Corby] gi|295650265|gb|ADG26112.1| threonyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] Length = 637 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 6/156 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-- 220 V + + + GY E+ P LV +G F D+MF Sbjct: 260 PGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMFVT 319 Query: 221 CTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 T + + + +Y+H + + LPLR + R E A G++R Sbjct: 320 ETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALH---GLMRVR 376 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + E+ +E ML + + K Sbjct: 377 NMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDFGF 412 >gi|165924098|ref|ZP_02219930.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334] gi|165916454|gb|EDR35058.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 334] Length = 653 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + +V + I T ++GY EV P L+ +G + Sbjct: 259 MDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDASLWDKSGHL 318 Query: 213 PKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DD+F + P S + +++ + + LPLR+ R+E Sbjct: 319 EKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYRDLPLRYAEFGACHRNEPSG-- 376 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + E+ + L T Sbjct: 377 -TLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADFGFTEVIHKLSTR---- 431 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + EVW + E Sbjct: 432 PEKRVGSDEVWTKAEQALAE 451 >gi|251795037|ref|YP_003009768.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247542663|gb|ACS99681.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 637 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 69/229 (30%), Gaps = 24/229 (10%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + + G F + G + + + Y EV P ++ +G Sbjct: 256 FMFSEEAPGMPFYLPKGMAIR---TALENFSRELLNRNDYEEVRTPFMMNKRMWEQSGHW 312 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+M+ T ++ ++ + + + LP+R R E A Sbjct: 313 EHYKDNMYFTKVDESEFALKPMNCPGHMLIFKNSLRSYRELPVRLAEFGQVHRHELSGAL 372 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 GM+R F + + R + E +++S E+ K Y V Sbjct: 373 ---GGMMRVRTFCQDDAHLFVRPDQIEEEIGKVMSLIGEVYKVFGFAYTVELS----TRP 425 Query: 330 SACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 + D E+W + S + Q YR + Sbjct: 426 ADYMGSD-ELWDEAEQ------SLKNVLDAQ----GVNYRINEGDGAFY 463 >gi|147671507|ref|YP_001215778.1| threonyl-tRNA synthetase [Vibrio cholerae O395] gi|262168212|ref|ZP_06035910.1| threonyl-tRNA synthetase [Vibrio cholerae RC27] gi|172047342|sp|A5EZ18|SYT_VIBC3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146313890|gb|ABQ18430.1| threonyl-tRNA synthetase [Vibrio cholerae O395] gi|227014955|gb|ACP11164.1| threonyl-tRNA synthetase [Vibrio cholerae O395] gi|262023455|gb|EEY42158.1| threonyl-tRNA synthetase [Vibrio cholerae RC27] Length = 642 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + G F G E + I +E+GY EV PL++ +G Sbjct: 255 FHMQQEAPGMVFWHHNGWSVFRE---LEIFIRHKLNEYGYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 424 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 425 PEKRVGSDEIWDKSEQA 441 >gi|303325499|ref|ZP_07355942.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] gi|302863415|gb|EFL86346.1| threonine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] Length = 648 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 7/164 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + L F H + GY V P L+R E +G + ++M Sbjct: 262 VAPGMVFWLPKGMLVRAILEDFWRKEHL-KRGYDMVQGPQLLRVETWQRSGHYDHYRENM 320 Query: 220 FCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + T D + P + ++ +Y +E+ + LP R+ L R E G+L Sbjct: 321 YFTRIEDDAYGIKPMNCIAHMLIYKNELRSYRDLPQRYFELGVVHRHEKSGVLH---GLL 377 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 R QF + + + E E ++ +++ Y+V Sbjct: 378 RVRQFTQDDAHILCAPEQLEGEILGVIHLIRDLMHLFGFQYKVA 421 >gi|73919802|sp|Q5ZS05|SYT_LEGPH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS Length = 637 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 6/156 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-- 220 V + + + GY E+ P LV +G F D+MF Sbjct: 260 PGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMFVT 319 Query: 221 CTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 T + + + +Y+H + + LPLR + R E A G++R Sbjct: 320 ETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALH---GLMRVR 376 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + E+ +E ML + + K Sbjct: 377 NMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDFGF 412 >gi|322789620|gb|EFZ14835.1| hypothetical protein SINV_12839 [Solenopsis invicta] Length = 232 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 9/196 (4%) Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 + E L + + IPN + NE L++ G+KP +E E+ Sbjct: 41 QDSNNPEKQELLLQELRKIPNCTHP--AVTEYGNEPRLLKECGRKPEFDFEPQEFAELVT 98 Query: 147 ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAM 206 L + + ++G + +L G LA LE AL + + ++G+ +S P ++ + + Sbjct: 99 NLKAIRTNTLGPITGQKSYILLGDLAELEEALIHYSL-RRLMKYGFKLLSVPDIIPTKII 157 Query: 207 YGTGQIPKFADDMFCTTDGRW-----LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 G I + D + L T+E+SL + + ++ LPL+ ++ + Sbjct: 158 ERCGLIVDDGRTLVYNLDSYYGDDYSLSGTAEMSLASKLMNTVLSHDMLPLKLAAVSRCY 217 Query: 262 RSEAGSAGRDTRGMLR 277 R+E GS + RG+ R Sbjct: 218 RAE-GSGVLEERGIYR 232 >gi|319942329|ref|ZP_08016644.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319804202|gb|EFW01102.1| threonyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 636 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 67/201 (33%), Gaps = 6/201 (2%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + ++ + + + E + + D A V Sbjct: 215 QRIYGTAWATKDEQKAYLEMLAEAEKRDHRRLGRELDLFHLQDEAPGMVFWHAKGWALWQ 274 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL- 236 + + + ++GY EV AP L+ +G K+ D+MF T ++ Sbjct: 275 VIEQFMRRVYQDNGYEEVKAPQLLDRSLWERSGHWAKYRDNMFTTESENRYYALKPMNCP 334 Query: 237 --TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +++ ++ + LPLR R+E+ + G++R F + + E+ Sbjct: 335 GHIQIFNSKLRSYRDLPLRIGEFGQCHRNESSGSLH---GLMRVRGFTQDDGHIFCTEDQ 391 Query: 295 SFTEHERMLSCAEEILKRLDL 315 E E + +++ K Sbjct: 392 ILAECEAFTALVQKVYKTFGF 412 >gi|256113621|ref|ZP_05454441.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|265994988|ref|ZP_06107545.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|262766101|gb|EEZ11890.1| threonyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] Length = 658 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 111 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 171 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 231 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+ P ++ +G + D+MF L P + ++ Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDHVFALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 407 Query: 301 RMLSCAEEILKRLDL 315 ++ + K Sbjct: 408 QINDLILSVYKDFGF 422 >gi|171058428|ref|YP_001790777.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6] gi|238689097|sp|B1XYZ3|SYT_LEPCP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|170775873|gb|ACB34012.1| threonyl-tRNA synthetase [Leptothrix cholodnii SP-6] Length = 637 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 52/158 (32%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + ++GY EV P ++ TG K+ D+MF Sbjct: 262 HAPGVVFWHPKGWTVWQQVEQYMRRVYRDNGYQEVKGPQILDKGLWEKTGHWDKYRDNMF 321 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T L P + ++ I + LPLR+ R+E G++R Sbjct: 322 TTESEKRDYALKPMNCPGHILIFKQGIKSYRDLPLRYGEFGQCHRNEPSGGLH---GIMR 378 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E + + +++ Sbjct: 379 VRGFTQDDGHIFCTEDQILPECDAFTTLLQKVYADFGF 416 >gi|52842920|ref|YP_096719.1| threonyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630031|gb|AAU28772.1| threonyl tRNA synthase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 646 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 6/156 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-- 220 V + + + GY E+ P LV +G F D+MF Sbjct: 269 PGMVFWHPKGWTIYQELEHYMRNRLVDFGYQEIRTPQLVDRSLWEKSGHWANFRDEMFVT 328 Query: 221 CTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 T + + + +Y+H + + LPLR + R E A G++R Sbjct: 329 ETENRHYAVKPMSCPCHVQIYNHGLKSYRDLPLRLSEFGNCHRCEPSGALH---GLMRVR 385 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + E+ +E ML + + K Sbjct: 386 NMVQDDAHIFCTEDQIQSEVAMMLELVQSVYKDFGF 421 >gi|162147243|ref|YP_001601704.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209544293|ref|YP_002276522.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|189083610|sp|A9HFP5|SYT_GLUDA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161785820|emb|CAP55391.1| Threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209531970|gb|ACI51907.1| threonyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 641 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 57/204 (27%), Gaps = 12/204 (5%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A S+ Q + + GY EV P LV +G Sbjct: 249 REMDLFHIQEEAVGSIFWHPKGWRLYTALQDYMRRAQTRGGYQEVRTPQLVDRALWEASG 308 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEA 265 K+ + MF T + + ++ H + + LPLR R E Sbjct: 309 HWDKYREHMFIATVEDEDKTLALKPMNCPCHVQIFRHGLRSYRELPLRMAEFGACHRYEP 368 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 A G++R F + + E E R + E+ L V Sbjct: 369 SGALH---GIMRVRSFTQDDAHIFCTESQIAAETARFVRMLAEVYADLGFESFRVKFADR 425 Query: 326 DLGFSACKTYDLEVWLAGQNLYRE 349 + E W + E Sbjct: 426 ----PEQRAGSDETWDRAEGALIE 445 >gi|310815279|ref|YP_003963243.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] gi|308754014|gb|ADO41943.1| threonyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] Length = 648 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 65/226 (28%), Gaps = 12/226 (5%) Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 + + R+ + + + E + + D A V Sbjct: 210 WLGDSSRPMLQRIYGVAFRNREDLKAHMTMLEEAAKRDHRRLGREMDLFHMQEEAPGQVF 269 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW 227 Q + + GY EV+ P +V +G + D+MF Sbjct: 270 WHPNGWTVYTALQDYMRRRQRKDGYVEVNTPQVVNRVLWEKSGHWENYRDNMFIVEVDEE 329 Query: 228 LIP----TSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + + +++H + + LPLR R E A G++R Sbjct: 330 GAKEKVVNALKPMNCPCHVQIFNHGLKSYRELPLRMAEFGSCARYEPSGALH---GIMRV 386 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 F + + E+ +E ++ + + L V L T Sbjct: 387 RGFTQDDGHIFCTEDQIESETKKFIEFLASVYADLGFESWRVKLST 432 >gi|293400671|ref|ZP_06644816.1| glycine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305697|gb|EFE46941.1| glycine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 460 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 85/236 (36%), Gaps = 22/236 (9%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ--IPKFADDMFCTTDGRWLIP 230 A+ +++ + H + + + + + M+ T Q + + ++ + Sbjct: 118 WSNEAMMEYINEHHIACPKCGKHNFTDIRQFNLMFKTFQGILEDSKNTIYLRPE------ 171 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 172 TAQGMFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + +E + + L L + H R +L F + T D+E Q + Sbjct: 228 QPGTDLEWYEYYKNYCMKFLTDLGVDPEHLRFRDHTPEELAFYSKGTCDIEYNFHSQIGW 287 Query: 348 REISSCSTCGNF------QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 E+ + ++ ++ + + Y DP + + + V V R ++A L Sbjct: 288 GELWGIADRTDYDLKQHQEASKKSLEYLDPTTNEKYLPYCV-EPAVGVERLMLAFL 342 >gi|224826514|ref|ZP_03699615.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002] gi|224601115|gb|EEG07297.1| threonyl-tRNA synthetase [Lutiella nitroferrum 2002] Length = 632 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 64/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWQLWQSVEQYMRATLAEAGYQEIRTPMVMDRILWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T + ++ +++ + + LPLR+ R+E A Sbjct: 310 ENYRENMFTTESEKRDYAVKPMNCPGHVQVFNQGLRSYRDLPLRYAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + + ++ V L Sbjct: 370 H---GIMRVRGFVQDDAHIFCTEEQIIDEAKAFNELTMRVYRQFGFDNVSVKLSLR---- 422 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + LE W +N RE Sbjct: 423 PEKYSGTLEAWDRAENGLRE 442 >gi|167623946|ref|YP_001674240.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|189083622|sp|B0TT20|SYT_SHEHH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167353968|gb|ABZ76581.1| threonyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 642 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 98/338 (28%), Gaps = 37/338 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSA---QIGQAIAEGNLSLVDALKNETSTLKEQL--PI 86 +D +++ + I+ + R + + + + + + D + K + Sbjct: 105 DIDLDHKLTQEDIDALEKRMAALAKTNYAVDKRVVSWQEAR-DTFEARGEDYKMAILDEN 163 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 + K+ ++ I + + + + + + S + + + Sbjct: 164 IPKDSTPALYHHEEYIDMCRGPHVPNMKFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAW 223 Query: 147 ALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL 185 A D A V + + I Sbjct: 224 ADKKALKVHLNRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQ 283 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSH 242 ++ Y EV PL++ +G K++D MF T + P + +++ Sbjct: 284 KLGQYTYQEVKGPLMMDRVLWERSGHWDKYSDAMFTTSSENREYAIKPMNCPGHVQIFNQ 343 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LPLR R+E + G++R F + + EE E Sbjct: 344 GLKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQVQQEVSAC 400 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + + VV L T + D ++W Sbjct: 401 IRMVYDTYATFGFSNIVVKLSTR----PEKRIGDDDMW 434 >gi|306843943|ref|ZP_07476538.1| threonyl-tRNA synthetase [Brucella sp. BO1] gi|306275698|gb|EFM57422.1| threonyl-tRNA synthetase [Brucella sp. BO1] Length = 658 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 111 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 171 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 231 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+AP ++ +G + D+MF L P + ++ Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 407 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 408 RINDLILSVYKDFGF 422 >gi|293396370|ref|ZP_06640648.1| threonine-tRNA ligase [Serratia odorifera DSM 4582] gi|291421159|gb|EFE94410.1| threonine-tRNA ligase [Serratia odorifera DSM 4582] Length = 387 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + E+ Y EV P ++ TG + D MF Sbjct: 4 EAPGMVFWHNDGWTIFRELEAFVRMKLKEYQYQEVKGPFMMDRVLWEKTGHWENYKDAMF 63 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + P + +++ + + LPLR R+E + G++R Sbjct: 64 TTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSLH---GLMR 120 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E + ++ Sbjct: 121 VRGFTQDDAHIFCTEDQVRAEVNECIRMVYDVYGTFGF 158 >gi|113970292|ref|YP_734085.1| threonyl-tRNA synthetase [Shewanella sp. MR-4] gi|117920487|ref|YP_869679.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3] gi|123029660|sp|Q0HIT9|SYT_SHESM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225501|sp|A0KWV4|SYT_SHESA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113884976|gb|ABI39028.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella sp. MR-4] gi|117612819|gb|ABK48273.1| threonyl-tRNA synthetase [Shewanella sp. ANA-3] Length = 642 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 88/312 (28%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D ++++ + IE + R + + + ++ A + E + + Sbjct: 105 DIDLEHKLTQEDIEALEKRMLELAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K+ ++ + + + + + S + + + A Sbjct: 165 SKDATPALYHHEEYTDMCRGPHVPNMRFCHHFKLMSIAGAYWRGNSENKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALSTHLARLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHE 243 +++ Y EV PL++ +G K+++ MF T+ ++ +++ Sbjct: 285 LNQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTSSENREYAVKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + E+ E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEDQVQAEVSSCI 401 Query: 304 SCAEEILKRLDL 315 + Sbjct: 402 QMVYDTYSTFGF 413 >gi|225026720|ref|ZP_03715912.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353] gi|224955955|gb|EEG37164.1| hypothetical protein EUBHAL_00972 [Eubacterium hallii DSM 3353] Length = 650 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 111/343 (32%), Gaps = 43/343 (12%) Query: 48 RARRNSNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 R ++ ++ + I E + +K + K +L E+ + Sbjct: 112 REDLDAIEKEMKKVIKENPPIERYELPREEAIAYMKEKDEPYKVELIEDLPEDATISFYK 171 Query: 99 KKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 + + + P + N +L R G + E + Sbjct: 172 QGDFTDLCAGPHLMSVKPIKAFKLTASSGAYWRGNENNKMLTRIYGTAYTKKADLEERLK 231 Query: 144 IGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 E + L D +R + + G +L A + + L +++ DL +E GY Sbjct: 232 YLEEIKLRDHNRLGREMELFTTVDVIGQGLPLLLPKGAKIIQTLQRWIEDLEDNEWGYVR 291 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT-SEVSLTNLYSHEII-----ESK 248 PL+ + + +G + + MF D + +T + + + Sbjct: 292 TKTPLMAKSDLYKISGHWDHYKEGMFVLGDEENDKEVLALRPMTCPFQYYCYKNTQKSYR 351 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LP R + + FR+E + G+ R QF E I R + + E + L A+ Sbjct: 352 DLPYRMSETSTLFRNEDSG---EMHGLTRVRQFTISEGHLIIRPDQTNDELKGCLHLAQY 408 Query: 309 ILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 L L + V + D D E W Q+ R I Sbjct: 409 CLGVLGVQDDVTYRLSKWDPNNKEKYLGDDEYWETTQDAIRNI 451 >gi|306841798|ref|ZP_07474483.1| threonyl-tRNA synthetase [Brucella sp. BO2] gi|306288128|gb|EFM59518.1| threonyl-tRNA synthetase [Brucella sp. BO2] Length = 661 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 114 RNEPFTLDDLPMIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 173 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 174 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 233 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 234 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 293 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+AP ++ +G + D+MF L P + ++ Sbjct: 294 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 353 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 354 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 410 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 411 RINDLILSVYKDFGF 425 >gi|256159790|ref|ZP_05457533.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1] gi|256255048|ref|ZP_05460584.1| threonyl-tRNA synthetase [Brucella ceti B1/94] gi|261222239|ref|ZP_05936520.1| threonyl-tRNA synthetase [Brucella ceti B1/94] gi|265998203|ref|ZP_06110760.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1] gi|260920823|gb|EEX87476.1| threonyl-tRNA synthetase [Brucella ceti B1/94] gi|262552671|gb|EEZ08661.1| threonyl-tRNA synthetase [Brucella ceti M490/95/1] Length = 658 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 111 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 171 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 231 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+AP ++ +G + D+MF L P + ++ Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 407 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 408 RINDLILSVYKDFGF 422 >gi|161831126|ref|YP_001597175.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331] gi|161762993|gb|ABX78635.1| threonyl-tRNA synthetase [Coxiella burnetii RSA 331] Length = 660 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + +V + I T ++GY EV P L+ +G + Sbjct: 259 MDLFHFQPESPGNVFWHPNGWSIILQMREYIRQITHKYGYQEVHTPQLIDASLWDKSGHL 318 Query: 213 PKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DD+F + P S + +++ + + LPLR+ R+E Sbjct: 319 EKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYRDLPLRYAEFGACHRNEPSG-- 376 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + E+ + L T Sbjct: 377 -TLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADFGFTEVIHKLSTR---- 431 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + EVW + E Sbjct: 432 PEKRVGSDEVWTKAEQALAE 451 >gi|118602649|ref|YP_903864.1| threonyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166225495|sp|A1AWT6|SYT_RUTMC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118567588|gb|ABL02393.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 632 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 56/186 (30%), Gaps = 13/186 (6%) Query: 140 EHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 EH E D + K+ A + L + + ++ Y Sbjct: 230 EHLHRLEEASRRDHRKIGKIQDLFHIQEEAPGMIFWHAKGWTLCQLIEQYMRGIFKDNDY 289 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKS 249 EV P L+ +G KF D MF T + P + + +Y+ + + Sbjct: 290 QEVHTPQLIDKSLWEKSGHWEKFGDTMFTTSSENRDYAVKPMNCPAHIQIYNQGLKSYRD 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LPLR R+E G++R F + + E E + + Sbjct: 350 LPLRLAEFGSCHRNEPSG---TLHGIMRVRNFVQDDGHIFCTPEQIQVEVSTFIDLTFAV 406 Query: 310 LKRLDL 315 K Sbjct: 407 YKHFGF 412 >gi|114047517|ref|YP_738067.1| threonyl-tRNA synthetase [Shewanella sp. MR-7] gi|123326545|sp|Q0HV45|SYT_SHESR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113888959|gb|ABI43010.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp. MR-7] Length = 642 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 88/312 (28%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D ++++ + IE + R + + + ++ A + E + + Sbjct: 105 DIDLEHKLTQEDIEALEKRMLELAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K+ ++ + + + + + S + + + A Sbjct: 165 SKDATPALYHHEEYTDMCRGPHVPNMRFCHHFKLMSIAGAYWRGNSENKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALSTHLARLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHE 243 +++ Y EV PL++ +G K+++ MF T+ ++ +++ Sbjct: 285 LNQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTSSENREYAVKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + E+ E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEDQVQAEVSSCI 401 Query: 304 SCAEEILKRLDL 315 + Sbjct: 402 QMVYDTYSTFGF 413 >gi|23501949|ref|NP_698076.1| threonyl-tRNA synthetase [Brucella suis 1330] gi|161619021|ref|YP_001592908.1| threonyl-tRNA synthetase [Brucella canis ATCC 23365] gi|163843337|ref|YP_001627741.1| threonyl-tRNA synthetase [Brucella suis ATCC 23445] gi|254704361|ref|ZP_05166189.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|254710151|ref|ZP_05171962.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|254714150|ref|ZP_05175961.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1] gi|254716792|ref|ZP_05178603.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1] gi|256031646|ref|ZP_05445260.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|256061156|ref|ZP_05451310.1| threonyl-tRNA synthetase [Brucella neotomae 5K33] gi|256369496|ref|YP_003107004.1| threonyl-tRNA synthetase [Brucella microti CCM 4915] gi|260168776|ref|ZP_05755587.1| threonyl-tRNA synthetase [Brucella sp. F5/99] gi|260566393|ref|ZP_05836863.1| threonyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261218590|ref|ZP_05932871.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261317705|ref|ZP_05956902.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261321913|ref|ZP_05961110.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261325162|ref|ZP_05964359.1| threonyl-tRNA synthetase [Brucella neotomae 5K33] gi|261755033|ref|ZP_05998742.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|261758257|ref|ZP_06001966.1| threonyl-tRNA synthetase [Brucella sp. F5/99] gi|265988738|ref|ZP_06101295.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|38258386|sp|Q8G0L8|SYT_BRUSU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083599|sp|A9M582|SYT_BRUC2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189083600|sp|B0CGM0|SYT_BRUSI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|23347895|gb|AAN29991.1| threonyl-tRNA synthetase [Brucella suis 1330] gi|161335832|gb|ABX62137.1| threonyl-tRNA synthetase [Brucella canis ATCC 23365] gi|163674060|gb|ABY38171.1| threonyl-tRNA synthetase [Brucella suis ATCC 23445] gi|255999656|gb|ACU48055.1| threonyl-tRNA synthetase [Brucella microti CCM 4915] gi|260155911|gb|EEW90991.1| threonyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|260923679|gb|EEX90247.1| threonyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261294603|gb|EEX98099.1| threonyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261296928|gb|EEY00425.1| threonyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261301142|gb|EEY04639.1| threonyl-tRNA synthetase [Brucella neotomae 5K33] gi|261738241|gb|EEY26237.1| threonyl-tRNA synthetase [Brucella sp. F5/99] gi|261744786|gb|EEY32712.1| threonyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|264660935|gb|EEZ31196.1| threonyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] Length = 658 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 111 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 171 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 231 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+AP ++ +G + D+MF L P + ++ Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 407 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 408 RINDLILSVYKDFGF 422 >gi|163801061|ref|ZP_02194961.1| threonyl-tRNA synthetase [Vibrio sp. AND4] gi|159175410|gb|EDP60207.1| threonyl-tRNA synthetase [Vibrio sp. AND4] Length = 642 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 96/344 (27%), Gaps = 37/344 (10%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PI 86 + LDE +E I R + + + + D ++ K ++ Sbjct: 107 IDLDESL--TQDDLEKIEKRMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDEN 164 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE------ 140 + +++ ++ I + + + + + S + + Sbjct: 165 VSRDDRPGLYHHEEYIDMCRGPHVPNMSFCQHFTLMNVAGAYWRGNSDNKMLQRIYGTAF 224 Query: 141 --------HFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------L 185 H E D + K + D Sbjct: 225 HDKKALKAHLTRLEEAAKRDHRKLGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRS 284 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSH 242 E+GY EV PL++ +G K+AD MF T L P + +++ Sbjct: 285 KLDEYGYQEVKGPLIMDRVLWERSGHWDKYADAMFTTASENREYALKPMNCPGHVQIFNQ 344 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LPLR R+E A G++R F + + E E Sbjct: 345 GLKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTSC 401 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + + VV L T + E+W + Sbjct: 402 IKMVYDTYQTFGFDNIVVKLSTR----PEQRVGSDEIWDQSEEA 441 >gi|146311380|ref|YP_001176454.1| threonyl-tRNA synthetase [Enterobacter sp. 638] gi|166987323|sp|A4W9M3|SYT_ENT38 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145318256|gb|ABP60403.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Enterobacter sp. 638] Length = 642 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 49/166 (29%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 311 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + ++ Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEGQVRDEVNACIRMVYDMYSTFGF 413 >gi|254719143|ref|ZP_05180954.1| threonyl-tRNA synthetase [Brucella sp. 83/13] gi|265984137|ref|ZP_06096872.1| threonyl-tRNA synthetase [Brucella sp. 83/13] gi|306838428|ref|ZP_07471273.1| threonyl-tRNA synthetase [Brucella sp. NF 2653] gi|264662729|gb|EEZ32990.1| threonyl-tRNA synthetase [Brucella sp. 83/13] gi|306406568|gb|EFM62802.1| threonyl-tRNA synthetase [Brucella sp. NF 2653] Length = 658 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 111 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 171 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 231 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+AP ++ +G + D+MF L P + ++ Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 407 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 408 RINDLILSVYKDFGF 422 >gi|34496803|ref|NP_901018.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] gi|73919781|sp|Q7NYC6|SYT_CHRVO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|34102658|gb|AAQ59023.1| threonyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] Length = 633 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P+++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHPKGWQLWQNVEQYMRAKLNHEGYKEVRTPMMMDANLWERSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T + ++ +++ + + LPLR+ R+E A Sbjct: 310 ANYRENMFITESEKRDYAVKPMNCPGHVQIFNSGLRSYRDLPLRYAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + E+ R Sbjct: 370 H---GIMRVRGFVQDDGHIFCTEDQINQEAKDFHRLVMEVYDRFGF 412 >gi|291327048|ref|ZP_06126787.2| threonine--tRNA ligase [Providencia rettgeri DSM 1131] gi|291311980|gb|EFE52433.1| threonine--tRNA ligase [Providencia rettgeri DSM 1131] Length = 653 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 32/321 (9%), Positives = 83/321 (25%), Gaps = 39/321 (12%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNETSTL 80 + +++L + +E + R + + + + Sbjct: 115 YDVDLDHML--------TQEDLEKLEKRMLELAKTDYDVVKKRVSWSEARETFVARGEDY 166 Query: 81 KEQL--PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 K ++ + +++ ++ + + + + + + S + Sbjct: 167 KVEILDQNISQDDRPGLYHHEEYVDMCRGPHVPNMRFCHHFKLQKVAGAYWRGNSDNKML 226 Query: 139 REHFEIGEALGL---------------------MDFDRATKLSGARFSVLTGHLAHLERA 177 + + A D A + Sbjct: 227 QRIYGTAWADKKQLAAYLLRLEEAAKRDHRKIGKQLDLYHMQEEAPGMAFWHNDGWTIFR 286 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEV 234 + + + Y EV P ++ TG + D MF T + P + Sbjct: 287 ELETFVRTKLKAYNYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCVKPMNCP 346 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +++ + + LPLR R+E A G++R F + + EE Sbjct: 347 GHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQ 403 Query: 295 SFTEHERMLSCAEEILKRLDL 315 +E + ++ Sbjct: 404 ILSEVTSCIEMIYDVYATFGF 424 >gi|328472989|gb|EGF43837.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus 10329] Length = 642 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 100/344 (29%), Gaps = 37/344 (10%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PI 86 + LDE + +E I R + + + + D ++ K ++ Sbjct: 107 IDLDESL--TQEDLEKIEQRMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDEN 164 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEV--------------PIGTSANENILIRSVGKKP 132 + +++ ++ I + + +++ +L R G Sbjct: 165 VSRDDRPGLYHHEEYIDMCRGPHVPNMGFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAF 224 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMIDL------ 185 + H E D + K + DL Sbjct: 225 HDKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRD 284 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSH 242 +E+ Y EV PL++ +G K+AD MF T + P + +++ Sbjct: 285 KLNEYDYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQ 344 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LPLR R+E A G++R F + + E E Sbjct: 345 GLKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTSC 401 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + + VV L T + E+W + Sbjct: 402 IKMVYDTYQTFGFDNIVVKLSTR----PEKRVGSDEIWDQSEEA 441 >gi|121601812|ref|YP_988945.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583] gi|166223323|sp|A1USJ2|SYT_BARBK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120613989|gb|ABM44590.1| threonyl-tRNA synthetase [Bartonella bacilliformis KC583] Length = 658 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 92/315 (29%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R E + ++++K R +I++ + + + +I E + E Sbjct: 111 RQQPFTLEDLNTIEKKMREIIQRNKFFKKEIWSREKAKKIFSDKGELYKVELIDAIPEDQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + S ++ + + + AN +L R G S + Sbjct: 171 DLKIYYQGDWFDLCRGPHVPSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFSNEN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSE 189 + + + E D R + + + E Sbjct: 231 ALKAYLNMLEEAEKRDHRRLGREMDLFHFQEEGPGMIFWHPKGWKMFQNLVSYMRRRLDE 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--------CTTDGRWLIPTSEVSL-TNLY 240 H Y EV+AP ++ +G + ++MF + + + ++ Sbjct: 291 HKYDEVNAPQVLDKSLWETSGHWGWYQENMFKTIPATNDWNDEHVYALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP+R R E + G++R F + + +E E Sbjct: 351 KHGLKSYRDLPIRLAEFGLLHRYEPSGSLH---GLMRVRSFTQDDAHVFCTDEQLADECL 407 Query: 301 RMLSCAEEILKRLDL 315 ++ Sbjct: 408 KINDLILSTYADFGF 422 >gi|254701818|ref|ZP_05163646.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513] Length = 658 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 111 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 171 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID-------LHTSE 189 + + + E D R + G A G M Sbjct: 231 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQKLVSYMRRRLDS 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+AP ++ +G + D+MF L P + ++ Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 407 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 408 RINDLILSVYKDFGF 422 >gi|157803434|ref|YP_001491983.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel] gi|166225493|sp|A8EXW5|SYT_RICCK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157784697|gb|ABV73198.1| threonyl-tRNA synthetase [Rickettsia canadensis str. McKiel] Length = 635 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 72/235 (30%), Gaps = 10/235 (4%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + + + E + + D A+ V Sbjct: 215 QRIYGTAWATKEQLDHYLFMLEEAEKRDHRKLGRELDLFHFQEEAQGMVFWHDKGWSIYN 274 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL- 236 + + I ++GYTEV P+LV +G KF D+MF ++ ++ Sbjct: 275 IVEQYIRKKIRKNGYTEVKTPVLVDKRLWEASGHWEKFRDNMFALEADNKILALKPMNCP 334 Query: 237 --TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ I + LPLR + R+EA A G++R + + EE Sbjct: 335 CHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALH---GLMRVRSLVQDDAHIFCAEEQ 391 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E E+ K V + EVW +N +E Sbjct: 392 ITDETVSFCKLLTEVYKDFGFTDIKVKFSDR----PEIRAGSDEVWDKAENALKE 442 >gi|28898054|ref|NP_797659.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|260362413|ref|ZP_05775365.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030] gi|260878403|ref|ZP_05890758.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|31340445|sp|Q87Q70|SYT_VIBPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28806268|dbj|BAC59543.1| threonyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|308091059|gb|EFO40754.1| threonine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308115583|gb|EFO53123.1| threonine--tRNA ligase [Vibrio parahaemolyticus K5030] Length = 642 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 100/344 (29%), Gaps = 37/344 (10%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PI 86 + LDE + +E I R + + + + D ++ K ++ Sbjct: 107 IDLDESL--TQEDLEKIEKRMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDEN 164 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEV--------------PIGTSANENILIRSVGKKP 132 + +++ ++ I + + +++ +L R G Sbjct: 165 VSRDDRPGLYHHEEYIDMCRGPHVPNMGFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAF 224 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMIDL------ 185 + H E D + K + DL Sbjct: 225 HDKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRD 284 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSH 242 +E+ Y EV PL++ +G K+AD MF T + P + +++ Sbjct: 285 KLNEYDYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQ 344 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LPLR R+E A G++R F + + E E Sbjct: 345 GLKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTSC 401 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + + VV L T + E+W + Sbjct: 402 IKMVYDTYQTFGFDNIVVKLSTR----PEKRVGSDEIWDQSEEA 441 >gi|300087925|ref|YP_003758447.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527658|gb|ADJ26126.1| threonyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 584 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 8/160 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 G + + + +F H +HGY + P + R +G + + D M Sbjct: 199 VGGGLVIYGPKAGRIRTTVEEFWRKAH-YDHGYELLYTPHIGRSNLWETSGHLQNYRDIM 257 Query: 220 FCTT----DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 + ++ P + Y ++ + LPLR+ L +R E G+ Sbjct: 258 YSPMDIDGQDYYVKPMNCPFHILFYKSQMRSYRDLPLRWAELGTVYRYERSGVLH---GL 314 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 LR F + + I E TE + +L + E+ + Sbjct: 315 LRVRGFTQDDAHIICTPEQIETEIDEVLRFSFEMWRTFGF 354 >gi|169334538|ref|ZP_02861731.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM 17244] gi|169259255|gb|EDS73221.1| hypothetical protein ANASTE_00941 [Anaerofustis stercorihominis DSM 17244] Length = 637 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 65/192 (33%), Gaps = 12/192 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G F + L F + H + GY E+ PL++ ++ + +G + D+M+ Sbjct: 260 GPGFPFFLPKGMVIRNELENFWREEH-RKRGYQEIKTPLILNEQLWHTSGHWDHYKDNMY 318 Query: 221 CTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + P + +Y ++ + LPLR + R E A G++R Sbjct: 319 FTRIDDNDYAIKPMNCPGSMLVYKRKMWSYRDLPLRIGEMGQVHRHELSGALH---GLMR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E E ++ + + Y V D D Sbjct: 376 VRTFTQDDAHIFMLPEQIKEEVIGVIDFIDYVYNMFGFKYHVELSTRPD----DSMGSD- 430 Query: 338 EVWLAGQNLYRE 349 E W RE Sbjct: 431 EDWNMATEALRE 442 >gi|302335586|ref|YP_003800793.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli DSM 7084] gi|301319426|gb|ADK67913.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Olsenella uli DSM 7084] Length = 588 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 7/168 (4%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 +G F + + AL + ++ GY +V P+++ +G + Sbjct: 207 MMSEAGPGFPFWLPNGMRVRNALMDYWQEMQ-DRFGYEQVQTPIILSRTLWETSGHWDHY 265 Query: 216 ADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 D+M+ T + + P + +Y + + LPL+ R E A Sbjct: 266 KDNMYTTQIDDEDFAIKPMNCPGACLVYKSKPRSYRDLPLKLAEAGLDHRHELKGALH-- 323 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 G+ R +F + + R + + + Y V Sbjct: 324 -GLFRVREFTQDDAHLFIRPDQITEQVTDTAHLITTYYAQFGFPYHVE 370 >gi|239993779|ref|ZP_04714303.1| threonyl-tRNA synthetase [Alteromonas macleodii ATCC 27126] Length = 638 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY EV PL++ +G K+A++MF Sbjct: 259 EAPGMVFWHNDGWSIYTELESYVRKKLREYGYDEVKGPLMMDRSLWEKSGHWDKYAENMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LPLR R+E A G++R Sbjct: 319 TTESEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALH---GLMR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + EE E + E Sbjct: 376 VRGFTQDDAHIFCTEEQILEEVSGCIKMVYETYAAFGF 413 >gi|186476316|ref|YP_001857786.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815] gi|238691316|sp|B2JJJ7|SYT_BURP8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|184192775|gb|ACC70740.1| threonyl-tRNA synthetase [Burkholderia phymatum STM815] Length = 635 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 56/168 (33%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + +E GY E+ P+++ +G Sbjct: 250 LDLFHMQDESPGMVFWHPRGWTLWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + D+MF T + + + ++H + + LPLR+ R+E+ Sbjct: 310 QNYRDNMFTTESEK--RDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNESSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E+ +E + A + K Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEDQFISESIAFNTLAMSVYKDFGF 412 >gi|154706797|ref|YP_001424763.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] gi|154356083|gb|ABS77545.1| threonyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] Length = 660 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + +V + I T ++GY EV P L+ +G + Sbjct: 259 MDLFHFQPESPGNVFWHPNGWSIILQMREYIRHITHKYGYQEVHTPQLIDASLWDKSGHL 318 Query: 213 PKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DD+F + P S + +++ + + LPLR+ R+E Sbjct: 319 GKFGDDIFSLPLEPQQYVIKPMSCPAHVQIFNQGVKSYRDLPLRYAEFGACHRNEPSG-- 376 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + E+ + L T Sbjct: 377 -TLHGLMRLRGFVQDDAHIFCTEDQIQSEVSAFIDQLHEVYADFGFTEVIHKLSTR---- 431 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + EVW + E Sbjct: 432 PEKRVGSDEVWTKAEQALAE 451 >gi|157826951|ref|YP_001496015.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389] gi|166225492|sp|A8GVV1|SYT_RICB8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157802255|gb|ABV78978.1| threonyl-tRNA synthetase [Rickettsia bellii OSU 85-389] Length = 633 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 67/220 (30%), Gaps = 10/220 (4%) Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 S + + E + + D A+ V + I ++GY Sbjct: 230 SYLFMLEEAEKRDHRKLGKELDLFHFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGY 289 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKS 249 EV P+LV +G KF DDMF + ++ ++ I + Sbjct: 290 IEVKTPVLVDKSLWELSGHWEKFRDDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRD 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LPLR + R+EA A G++R + + EE E E+ Sbjct: 350 LPLRMSEFGLCHRNEASGALH---GLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEV 406 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 K V + E W +N +E Sbjct: 407 YKDFGFTDIKVKFSDR----PEVRAGSSETWDKAENALKE 442 >gi|91205350|ref|YP_537705.1| threonyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|122990926|sp|Q1RJ48|SYT_RICBR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91068894|gb|ABE04616.1| Threonyl-tRNA synthetase [Rickettsia bellii RML369-C] Length = 635 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 67/220 (30%), Gaps = 10/220 (4%) Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 S + + E + + D A+ V + I ++GY Sbjct: 230 SYLFMLEEAEKRDHRKLGKELDLFHFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGY 289 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKS 249 EV P+LV +G KF DDMF + ++ ++ I + Sbjct: 290 IEVKTPVLVDKSLWELSGHWEKFRDDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRD 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LPLR + R+EA A G++R + + EE E E+ Sbjct: 350 LPLRMSEFGLCHRNEASGALH---GLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEV 406 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 K V + E W +N +E Sbjct: 407 YKDFGFTDIKVKFSDR----PEVRAGSSETWDKAENALKE 442 >gi|261752375|ref|ZP_05996084.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261742128|gb|EEY30054.1| threonyl-tRNA synthetase [Brucella suis bv. 5 str. 513] Length = 660 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 113 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 172 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 173 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 232 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID-------LHTSE 189 + + + E D R + G A G M Sbjct: 233 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQKLVSYMRRRLDS 292 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+AP ++ +G + D+MF L P + ++ Sbjct: 293 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 352 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 353 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 409 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 410 RINDLILSVYKDFGF 424 >gi|254515029|ref|ZP_05127090.1| threonyl-tRNA synthetase [gamma proteobacterium NOR5-3] gi|219677272|gb|EED33637.1| threonyl-tRNA synthetase [gamma proteobacterium NOR5-3] Length = 645 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 48/166 (28%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + Y E+ P LV +G Sbjct: 250 LDLFHTQEEAPGMVFWHPQGWTIYQVIEQYMREQQRAQDYQEIKTPQLVDMSLWEKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DDMF T ++ +++ + + LPLR R+E + Sbjct: 310 DKFGDDMFMLTADEREFAVKPMNCPCHVQVFNQGLRSYRDLPLRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + + Sbjct: 370 H---GIMRVRGFTQDDGHIFCTEEQIQPEVSTFIDFLHAVYADFGF 412 >gi|153009484|ref|YP_001370699.1| threonyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] gi|151561372|gb|ABS14870.1| threonyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] Length = 661 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 114 RNEPFTPDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFADKGENYKVELVEAIPAGQ 173 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + +N +L R G + + Sbjct: 174 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDSNNPMLTRIYGTAFANDN 233 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 234 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 293 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+AP ++ +G + D+MF L P + ++ Sbjct: 294 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHVMIF 353 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 354 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 410 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 411 RINDLILSVYKDFGF 425 >gi|114570943|ref|YP_757623.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Maricaulis maris MCS10] gi|122315357|sp|Q0AM08|SYT_MARMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114341405|gb|ABI66685.1| Ser-tRNA(Thr) hydrolase [Maricaulis maris MCS10] Length = 644 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 53/203 (26%), Gaps = 8/203 (3%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + +H E + + A+ V Sbjct: 216 QRIYGTAWADDKQLKAHLHRIEEAEKRDHRKLGKQMELFHFQEEAQGQVFWHPNGWRLYR 275 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 + GY E+ P L+ + +G K+ ++MF ++ + + + Sbjct: 276 TVTSYMRRRLEAAGYVEIRTPQLMDRKFWEASGHWDKYRENMFISSIDQEEKVLAVKPMN 335 Query: 238 NLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 ++ + LPLR R E + G++R F + + Sbjct: 336 CPCHVQVFNQGQKSYRDLPLRMAEFGSCHRYEPSGSLH---GLMRVRGFVQDDAHIFCTS 392 Query: 293 EDSFTEHERMLSCAEEILKRLDL 315 + E + + Sbjct: 393 DQITAEVSDFCELLKSVYADFGF 415 >gi|257092825|ref|YP_003166466.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045349|gb|ACV34537.1| threonyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 638 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + E+GY EV P+++ +G Sbjct: 250 LDLFHLQDEAPGMVFWHAKGWTIWQEVEQYMRRLLGENGYCEVKTPMIMDRTLWERSGHW 309 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ MF T + P + +++ + + LPLR R+E A Sbjct: 310 QNYAEHMFTTASENRDYAIKPMNCPGHIQIFNQGLRSYRDLPLRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + E+I Sbjct: 370 H---GIMRVRAFVQDDAHIFCTEAQVLPETAAFIDLLEKIYADFGF 412 >gi|332141016|ref|YP_004426754.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|238693239|sp|B4RSL8|SYT_ALTMD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|327551038|gb|AEA97756.1| threonyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 638 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY EV PL++ +G K+A++MF Sbjct: 259 EAPGMVFWHNDGWSIYTELESFVRKKLREYGYDEVKGPLMMDRSLWEKSGHWDKYAENMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LPLR R+E A G++R Sbjct: 319 TTESEKREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALH---GLMR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + EE E + E Sbjct: 376 VRGFTQDDAHIFCTEEQILEEVSGCIKMVYETYAAFGF 413 >gi|317491930|ref|ZP_07950364.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920051|gb|EFV41376.1| threonyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 645 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 60/200 (30%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRVKLKEYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E + Sbjct: 311 ENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMGEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSIFGFEKIAVKLSTR---- 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + E+W + E Sbjct: 424 PEKRIGSDEIWDRAEEDLAE 443 >gi|149916340|ref|ZP_01904860.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149809794|gb|EDM69646.1| threonyl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 663 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 96/344 (27%), Gaps = 54/344 (15%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K + +I + +R + + G V+ Sbjct: 110 DRKDPFTPEDLGVIEKKMKEIINLRDPVRTEIWDRARAVKHYEDSGEPFKVE-------- 161 Query: 80 LKEQLPILEKEEHEVCSSLKK-----LISCIPNVPLEEV--------PIGTSANENILIR 126 L E +P E + + VP + +N +L R Sbjct: 162 LIEAIPGTEPLRMYWHGPWQDLCRGPHLQNTGQVPADAFKLMSVAGAYWRGDSNRQMLQR 221 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALG 179 G +++ E D D A + Sbjct: 222 IYGVAFLNREKLKDYLTFLEEAEKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTTL 281 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVS 235 Q + GY EV+ P +V + +G K+ + MF R + Sbjct: 282 QDYMRRQQRRGGYVEVNTPQVVDRKLWEASGHWDKYQEHMFIVEVDEDHAREKSINALKP 341 Query: 236 LTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + +I + LPLR R E A G++R F + + Sbjct: 342 MNCPCHVQIFNRGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDAHIFC 398 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 RE+ E ++ + EI + DLGFS K Sbjct: 399 REDQIEAETKKFIGFLSEIYR--------------DLGFSDFKV 428 >gi|331001642|ref|ZP_08325165.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] gi|330413363|gb|EGG92730.1| threonyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] Length = 651 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 109/341 (31%), Gaps = 36/341 (10%) Query: 43 KIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 ++ + A + + +K + K +L E+ ++ + Sbjct: 114 DLDKLEAEMKKIIKEGAHIEKFELPREEAIKFMKEKGEPYKVELIQDLPEDEKISFYKQG 173 Query: 101 LISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 + + P +N+ L R G ++ H + Sbjct: 174 DFTDLCAGPHLQRTKDIKAFKLISSSMAYWRGDSNKAKLQRIYGTAYNSKEELEAHLKHL 233 Query: 146 EALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 E + L D ++ + + G ++ + + L +++ DL +E GY Sbjct: 234 EDIKLRDHNKLGREMELFTTVDVIGQGLPLMLPKGTKMIQKLQRWIEDLEDNEWGYVRTK 293 Query: 197 APLLVRDEAMYGTGQIPKFADDMFCTTDGRW-LIPTSEVSLTNL-----YSHEIIESKSL 250 PL+ + + +G + D MF D + + +T Y + + L Sbjct: 294 TPLMAKSDLYKISGHWDHYQDGMFILGDPQNDGEILALRPMTCPFQYYVYKNTQKSYRDL 353 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 P R + FR+E + G+ R QF E ++ R + + E + L+ A +L Sbjct: 354 PYRMGETSTLFRNEDSG---EMHGLTRVRQFTISEGHNVIRPDQAEEELQNCLNLAIYVL 410 Query: 311 KRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 L L V + D D W Q R I Sbjct: 411 DILGLRDDVTFRLSKWDKNNKGKYLGDDAYWEGTQAALRNI 451 >gi|82523876|emb|CAI78599.1| threonyl-tRNA synthetase [uncultured delta proteobacterium] Length = 631 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 7/175 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D ++ GA + A L F I H + GY +V P L+R E Sbjct: 244 KELDLFSLSEEVGAGMILWHPKGAMFRYLLEDFEIKEHL-KRGYQKVIGPQLLRSELWKK 302 Query: 209 TGQIPKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 +G + ++M+ + P + ++ +Y I + LP+R+ L R E Sbjct: 303 SGHFDHYRENMYFSEIDNQSYGIKPMNCLAHMLIYKSHIHSYRDLPIRYFELGTVHRHEK 362 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 G+LR +F + + + E E + +L + ++ Y V Sbjct: 363 SGVLH---GLLRVREFTQDDAHILCTPEQLDNEIKSILDFIKYVMGIFGFKYEVE 414 >gi|126725645|ref|ZP_01741487.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] gi|126704849|gb|EBA03940.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] Length = 649 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 56/214 (26%), Gaps = 12/214 (5%) Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + ++ + E + D D A V Sbjct: 214 DSDRAMLQRIYGVAFQNKEGLRDHMTFLEEAAKRDHRKLGRDMDLFHMQEEAPGQVFWHP 273 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGR 226 Q + GY EV+ P +V + +G K+ ++MF R Sbjct: 274 NGWRIYTTLQDFMRRKQVAGGYVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAR 333 Query: 227 WLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + + +I + LP+R R E A G++R F Sbjct: 334 EKAVNALKPMNCPCHVQIFNVGLKSYRDLPIRMAEFGSCNRYEPSGALH---GIMRVRGF 390 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + E E + I K L Sbjct: 391 TQDDGHIFCEESQIEEETAIYIEFLTSIYKDLGF 424 >gi|254706742|ref|ZP_05168570.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261314206|ref|ZP_05953403.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261303232|gb|EEY06729.1| threonyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] Length = 658 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 111 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 171 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 231 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTN-----LY 240 HGY EV+AP ++ +G + D+MF D + + ++ Sbjct: 291 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDCVFALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 407 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 408 RINDLILSVYKDFGF 422 >gi|163735041|ref|ZP_02142478.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149] gi|161391823|gb|EDQ16155.1| threonyl-tRNA synthetase [Roseobacter litoralis Och 149] Length = 648 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 86/317 (27%), Gaps = 24/317 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K + +I K + +R I A V+ + Sbjct: 110 DRAEPFSPEDLGLIEKKMKEIINKRDPVRTEVWDRPRAIAFYEANNEPYKVELIDAIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + Sbjct: 170 EPLRMYWHGDWQDLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSDRAMLQRIYGVAFTG 229 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + + + E + + D A V Q + Sbjct: 230 KEKLKAHLTMLEEAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWSIYTTLQDYMRRKQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ + MF R + + + Sbjct: 290 RAAGYQEVNTPQVVDRKLWEASGHWDKYQEHMFIVEVDEEHAREKAVNALKPMNCPCHVQ 349 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I + LPLR R E A G++R F + + RE+ E Sbjct: 350 IFNQGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDGHIFCREDQIEAE 406 Query: 299 HERMLSCAEEILKRLDL 315 ++ + + L Sbjct: 407 CAAFITYLSSVYQDLGF 423 >gi|157825427|ref|YP_001493147.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford] gi|166225491|sp|A8GML4|SYT_RICAH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|157799385|gb|ABV74639.1| threonyl-tRNA synthetase [Rickettsia akari str. Hartford] Length = 635 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 55/168 (32%), Gaps = 6/168 (3%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A+ V + I ++GYTEV P+LV +G Sbjct: 248 KELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEASG 307 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 KF DDMF + ++ ++ I + LPLR + R+EA Sbjct: 308 HWEKFRDDMFALDTDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R + + EE E E+ K Sbjct: 368 ALH---GLMRVRSLVQDDAHIFCTEEQITDETVSFCKLLTEVYKDFGF 412 >gi|26389730|dbj|BAC25781.1| unnamed protein product [Mus musculus] Length = 65 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Query: 2 LDIQWIR----QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LD+ R +P + +KR +P + ++ D + R + +++ +N S Sbjct: 3 LDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSK 62 Query: 57 QIG 59 IG Sbjct: 63 TIG 65 >gi|17987198|ref|NP_539832.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|256044731|ref|ZP_05447635.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|260564073|ref|ZP_05834559.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265991152|ref|ZP_06103709.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|22654120|sp|Q8YH89|SYT_BRUME RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|17982868|gb|AAL52096.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|260154089|gb|EEW89181.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|263001936|gb|EEZ14511.1| threonyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] Length = 658 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 111 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 171 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 231 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+ P ++ +G + D+MF L P + ++ Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 407 Query: 301 RMLSCAEEILKRLDL 315 ++ + K Sbjct: 408 QINDLILSVYKDFGF 422 >gi|294010776|ref|YP_003544236.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S] gi|292674106|dbj|BAI95624.1| threonyl-tRNA synthetase [Sphingobium japonicum UT26S] Length = 668 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 67/202 (33%), Gaps = 20/202 (9%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 + D A SV ++ + + + GY EV P ++ +G Sbjct: 262 EMDLFHLQQEAHGSVFWHPKGYIIWRALEAYMRRAIDDAGYREVKTPQVMDARQWEQSGH 321 Query: 212 IPKFADDMFCTTD-----------------GRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 K+ ++MF D L P + + ++ I + LPLRF Sbjct: 322 WGKYRENMFVIPDEVPNVEDEGPLVSDDADWMALKPMNCPAHVLIFRQGIKSYRDLPLRF 381 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 R+E A G++R QF + + RE+ E + A+ I K Sbjct: 382 YENGCCHRNEPHGALH---GLMRVRQFTQDDAHIFCREDQIVEEVRAFCALADRIYKDFG 438 Query: 315 LHYRVVSLCTGDLGFSACKTYD 336 Y + + F + +D Sbjct: 439 FTYSIKLALRPEKRFGSDAMWD 460 >gi|30248961|ref|NP_841031.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein [Nitrosomonas europaea ATCC 19718] gi|73919810|sp|Q82VV1|SYT_NITEU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|30138578|emb|CAD84869.1| thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein [Nitrosomonas europaea ATCC 19718] Length = 635 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + +GY E+ P ++ +G Sbjct: 250 LDLFHTQEEAPGMVYWHPKGWVVWQQIEQYMRQTLAGNGYVEIRTPQVLDRSLWESSGHW 309 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 F ++MF T + P + +++H + + LPLR R+EA A Sbjct: 310 ENFRENMFITESENRHYAIKPMNCPGHVQVFNHGLRSYRDLPLRLAEFGSCHRNEASGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + + ++ Sbjct: 370 H---GLMRVRSFTQDDAHIFCTEDQILGEVTKFIDLLNQVYINFGF 412 >gi|149910913|ref|ZP_01899544.1| threonyl-tRNA synthetase [Moritella sp. PE36] gi|149805980|gb|EDM65964.1| threonyl-tRNA synthetase [Moritella sp. PE36] Length = 513 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 59/197 (29%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + +I E Y EV P ++ +G Sbjct: 251 LDLYHMQEDAPGMVFWHNDGWIIFRELENLIREKLREFDYQEVKGPQIMDRSLWEKSGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+++ MFCT + P + +Y+ + + LPLR R+E + Sbjct: 311 DKYSEGMFCTHSENREYAIKPMNCPGHVQIYNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E E + E + L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTESQIQKEVSDCIKMVFETYATFGFENIEIKLSTR---- 423 Query: 330 SACKTYDLEVWLAGQNL 346 + E W + Sbjct: 424 PEKRVGSDETWDKSEQA 440 >gi|330810593|ref|YP_004355055.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378701|gb|AEA70051.1| Threonine--tRNA ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 640 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 ESPGMVFWHPNGWTLYQVLEQYMRQVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + I +++ + + LP+R R+E A G++R Sbjct: 318 TTQSENRDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + EE E + ++ + Sbjct: 375 VRAFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDFGF 412 >gi|148548433|ref|YP_001268535.1| threonyl-tRNA synthetase [Pseudomonas putida F1] gi|166225483|sp|A5W5E1|SYT_PSEP1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148512491|gb|ABQ79351.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas putida F1] Length = 640 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 62/191 (32%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+GY E+ P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRILWERSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T+ + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTSSESRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ K + L T Sbjct: 370 H---GIMRVRGFVQDDAHIFCTEEQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTR---- 422 Query: 330 SACKTYDLEVW 340 A + E+W Sbjct: 423 PAKRVGSEELW 433 >gi|254693779|ref|ZP_05155607.1| threonyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|261214058|ref|ZP_05928339.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya] gi|260915665|gb|EEX82526.1| threonine-tRNA ligase [Brucella abortus bv. 3 str. Tulya] Length = 658 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 111 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 171 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 231 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+ P ++ +G + D+MF L P + ++ Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 407 Query: 301 RMLSCAEEILKRLDL 315 + + K Sbjct: 408 HINDLILSVYKDFGF 422 >gi|167034477|ref|YP_001669708.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1] gi|189083619|sp|B0KKR8|SYT_PSEPG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166860965|gb|ABY99372.1| threonyl-tRNA synthetase [Pseudomonas putida GB-1] Length = 640 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 62/191 (32%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+GY E+ P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRILWERSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T+ + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTSSESRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ K + L T Sbjct: 370 H---GIMRVRGFVQDDAHIFCTEEQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTR---- 422 Query: 330 SACKTYDLEVW 340 A + E+W Sbjct: 423 PAKRVGSEELW 433 >gi|62289987|ref|YP_221780.1| threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699915|ref|YP_414489.1| threonyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189024229|ref|YP_001934997.1| threonyl-tRNA synthetase [Brucella abortus S19] gi|254689295|ref|ZP_05152549.1| threonyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|254697431|ref|ZP_05159259.1| threonyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|254730329|ref|ZP_05188907.1| threonyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|256257545|ref|ZP_05463081.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260545263|ref|ZP_05821004.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260883825|ref|ZP_05895439.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|73919775|sp|Q57D65|SYT_BRUAB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123740930|sp|Q2YQ07|SYT_BRUA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689368|sp|B2S5S6|SYT_BRUA1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|62196119|gb|AAX74419.1| ThrS, threonyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82616016|emb|CAJ11049.1| tRNA synthetases, class-II (G, H, P and S):Prolyl-tRNA synthetase, class IIa:Threonyl-tRNA synthetase, class IIa:TGS domain:A [Brucella melitensis biovar Abortus 2308] gi|189019801|gb|ACD72523.1| threonyl-tRNA synthetase [Brucella abortus S19] gi|260096670|gb|EEW80545.1| threonyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260873353|gb|EEX80422.1| threonyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] Length = 658 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 111 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 170 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 171 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 230 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 231 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 290 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+ P ++ +G + D+MF L P + ++ Sbjct: 291 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 350 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 351 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 407 Query: 301 RMLSCAEEILKRLDL 315 + + K Sbjct: 408 HINDLILSVYKDFGF 422 >gi|294495462|ref|YP_003541955.1| prolyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] gi|292666461|gb|ADE36310.1| prolyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] Length = 478 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 103/293 (35%), Gaps = 27/293 (9%) Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 PS + S + E+ + +MD K V + + M +L +H Sbjct: 11 PSKDNFSEWYNELLQIAKIMDVRYPVK----GLYVWHPFGFTIRKKTYSIMRELLDRDHE 66 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTSEVSLTNLYSHE 243 + L+ E M I F ++++ T L PTSE ++ +Y Sbjct: 67 -ETMFPLLIPEHEFMKEAQHIKGFEEEVYWVTHGGTSPLEVNLALRPTSETAIYPMYKLW 125 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHER 301 + LPLR + +FR E + TR ++R + + ED+ ++ + Sbjct: 126 VRSHADLPLRLYQIVNTFRYE----TKHTRPLIRLREITSFKEAHTVHATWEDAASQIDE 181 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 + +E +RL + D A T ++ + ++ + G+ + Sbjct: 182 AMRIYKEFYRRLAIPVLSSKRPEWDKFPGADYTIAVDSLMP-DGRTLQVGTAHHLGDNFA 240 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVA--VGRCLIAILENYLNADGSVTIPTV 412 + Y D + + + H RCL A++ + + G V P V Sbjct: 241 KTFEITYEDSEGEQV-YAHQ----ACYGVSERCLAALISTHGDDKGLVLPPEV 288 >gi|149371736|ref|ZP_01891152.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified eubacterium SCB49] gi|149355363|gb|EDM43923.1| threonine--tRNA ligase (threonine tRNA synthetase) [unidentified eubacterium SCB49] Length = 647 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 84/314 (26%), Gaps = 31/314 (9%) Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV------- 113 A +D K + + K +L ++ L Sbjct: 137 LRATSKADALDFYKKQDNEYKVELIENLEDGTITFCDHDSFTDLCRGGHLPHTGFVKAIK 196 Query: 114 -------PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK---LSGAR 163 N L R G +E+ + E D + K L Sbjct: 197 LMSIAGAYWRGDENNKQLTRIYGITFPKQKELKEYLALLEEAKKRDHRKLGKELELFTFS 256 Query: 164 FSVLTGHLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 V G L + + + + GY V P + E +G K+ +D Sbjct: 257 QKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHIGNKELYVTSGHFAKYGED 316 Query: 219 MFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 F + L P + +Y+ + + K LP R +R E + Sbjct: 317 SFQVINTPNDGEEFMLKPMNCPHHCEIYNAKPMSYKDLPKRLAEFGTVYRYEQSG---EL 373 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 G+ R F + + + E ++++ + L + D+ Sbjct: 374 HGLTRVRGFTQDDAHIFCTPDQLDEEFKKVIDLVLYVFGSLGFEKFTTQVSIRDMSKPEK 433 Query: 333 KTYDLEVWLAGQNL 346 D+ W +N Sbjct: 434 YIGDVSTWEKAENA 447 >gi|332971649|gb|EGK10599.1| threonine--tRNA ligase [Kingella kingae ATCC 23330] Length = 637 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 56/166 (33%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + +E GY EV P ++ +G Sbjct: 251 LDLFHLQDEAPGMVFWHPRGWALWQVIEQHMRRELTEAGYQEVKTPQVMDKTFWEKSGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T+ + ++ +++H + + LP+R R+E A Sbjct: 311 ANYKDNMFLTSSEKREYAVKPMNCPGHVQIFNHGLRSYRDLPMRLAEFGSCHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + +I ++ Sbjct: 371 H---GLMRVRGFVQDDAHIFCTEDQIAEETKAFNLLVMKIYQQFGF 413 >gi|260754807|ref|ZP_05867155.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870] gi|260758029|ref|ZP_05870377.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292] gi|260761852|ref|ZP_05874195.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59] gi|297248387|ref|ZP_06932105.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] gi|260668347|gb|EEX55287.1| threonine-tRNA ligase [Brucella abortus bv. 4 str. 292] gi|260672284|gb|EEX59105.1| threonine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59] gi|260674915|gb|EEX61736.1| threonine-tRNA ligase [Brucella abortus bv. 6 str. 870] gi|297175556|gb|EFH34903.1| threonyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] Length = 660 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 113 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 172 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 173 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 232 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 233 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 292 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+ P ++ +G + D+MF L P + ++ Sbjct: 293 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 352 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 353 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 409 Query: 301 RMLSCAEEILKRLDL 315 + + K Sbjct: 410 HINDLILSVYKDFGF 424 >gi|227537393|ref|ZP_03967442.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|227242771|gb|EEI92786.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] Length = 641 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 102/355 (28%), Gaps = 45/355 (12%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK-E 82 E S+ +++K L K+ E R + S +D + K + Sbjct: 112 EFSSDEFKQIEDKMLELAKRKEVF--ERKAVSKA----------EALDYFTEKGDEYKLD 159 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR--- 139 + LE + S C I N+ S L+R Sbjct: 160 LIKDLEDGKITFYSQGDFTDLCRGPHIPNTGFIKAIKLTNVAGAYWRGDESRKQLTRIYG 219 Query: 140 ----------EHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQ 180 ++ + E D + K G + A L + L Sbjct: 220 VTFPKASELTDYLKFIEEAKKRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRQKLID 279 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEV 234 FM + GY V P + + +G K+ +D F + +L P + Sbjct: 280 FMQRAQL-KAGYEPVVTPHIGHKQLYVTSGHYEKYGEDSFQPIKTPVEGEEFFLKPMNCP 338 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +Y + K LP+RF +R E + G+ R F + + R + Sbjct: 339 HHCEIYKTKPRSYKDLPVRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCRPDQ 395 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E ++++ + L + + D E W+ + E Sbjct: 396 VKEEFKKVIDLVLYVFGALGFEDYIAQVSLRDPENRTKYIGSDENWVLAERAIIE 450 >gi|87198229|ref|YP_495486.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium aromaticivorans DSM 12444] gi|123749972|sp|Q2GBX1|SYT_NOVAD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|87133910|gb|ABD24652.1| Ser-tRNA(Thr) hydrolase [Novosphingobium aromaticivorans DSM 12444] Length = 664 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 95/342 (27%), Gaps = 39/342 (11%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + +++ + R +I + +R S I + +G + E +E Sbjct: 120 EDLPAIEAEMRKIIAANKPLRREVWSREQLISRWKQQGESFKAEWA-AELPENEELTVYW 178 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPI-------------GTSANENILIRSVGKKPSA 134 + + + + + K Sbjct: 179 SGD--DWLDMCRGPHLPSTGKLDPNAFKLTRVSGAYWRGDQKNAMLSRVYGTGWLNKKQL 236 Query: 135 IHLSREHFEIGEALGLM---DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 E + + D A SV +L + + G Sbjct: 237 DAHLTRLEEAAKRDHRKLGNEMDLFHLQQEAHGSVFWHPKGYLIWRELEAYMRRAIDGAG 296 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------------GRWLIPTSEV 234 Y EV P ++ +G K+ ++MF D L P + Sbjct: 297 YREVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVDDEGPIVSNDADWMALKPMNCP 356 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 + ++ I + LPLR R+E A G++R QF + + RE+ Sbjct: 357 AHVLIFRQGIKSYRELPLRLYENGCCHRNEPHGALH---GLMRVRQFTQDDAHIFCREDQ 413 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 +E + A+ I K Y + + F + +D Sbjct: 414 IVSEVQAFCELADRIYKHFGFTYSIKLALRPEKRFGTEEMWD 455 >gi|182419627|ref|ZP_02950872.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237665561|ref|ZP_04525549.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376517|gb|EDT74094.1| threonyl-tRNA synthetase [Clostridium butyricum 5521] gi|237658508|gb|EEP56060.1| threonine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 636 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 106/320 (33%), Gaps = 26/320 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETSTLKEQLPI 86 E + ++++ ++K E+++ R S + + + + + L N+ E++ + Sbjct: 116 EDLEKIEKEMNKIVK--ENLKFERIDVSKEEALKIMKDNDEIYKVELINDLPE-GEKISL 172 Query: 87 LEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 ++ ++ K + + + +L R G S + H Sbjct: 173 YKQGDYIDLCRGPHIPSTKYAKAFKLISVAGAYWRGNEKNKMLQRVYGVAFSNLKELEIH 232 Query: 142 FEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 E D + K F L+ +L F +H E GY Sbjct: 233 LNNLEEAKKRDHRKLGKELKLFTFAEEGPGFPFFLPKGVILKNSLIDFWRKIH-YEAGYV 291 Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF--CTTDGRWLIPTSEVSLTNL-YSHEIIESKSL 250 EV P+++ + +G + ++M+ D + + + Y + + Sbjct: 292 EVETPIMLNKKLWETSGHWYHYKENMYTSMIDDEEFALKPMNCPGGMIVYKSDSHSYRDF 351 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 P+R L R E A G++R F + + E +E + ++ +++ Sbjct: 352 PMRVGELGRVHRHELSGALH---GLMRVRAFTQDDAHIFMLPEQIKSEIKGVVELIDKVY 408 Query: 311 K--RLDLHYRVVSLCTGDLG 328 H + + +G Sbjct: 409 SIFGFKYHVELSTRPEDSMG 428 >gi|312961943|ref|ZP_07776440.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6] gi|311283753|gb|EFQ62337.1| Threonyl-tRNA synthetase [Pseudomonas fluorescens WH6] Length = 640 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPNGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + I +++ + + LP+R R+E A G++R Sbjct: 318 TTQSENRDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + EE E + ++ + Sbjct: 375 VRGFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDFGF 412 >gi|212550461|ref|YP_002308778.1| threonyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|229470721|sp|B6YQ95|SYT_AZOPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|212548699|dbj|BAG83367.1| threonyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 648 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 97/352 (27%), Gaps = 27/352 (7%) Query: 23 LEPQS-EYILSLDEKNRILIKKIEDIRARRNSNS-----AQIG-QAIAEGNLSLVDALKN 75 + + ++ D + KK++++ +++ S S Q + + + L + Sbjct: 104 YDVDLGDGVVIKDVDLVTIEKKMQELASKKLSISRQNVTKQNALELFGKKGETYKIELIS 163 Query: 76 ETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + K + I I + + L R G Sbjct: 164 KLEDGKITVYTQGNFTDLCRGPHLPNTSYIKAIKLTSVARAYWKGDESRKQLTRIYGISF 223 Query: 133 SAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLERALGQF-----MID 184 E+ + E D R K L V G L + + Sbjct: 224 PKKEELSEYLALMEKAKKRDHRRIGKEMELFTFSHKVGRGLPLWLPKGTQLRLRLEDFLK 283 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHE 243 ++GY +V P + +G K+ D + + E Sbjct: 284 RIQKKYGYQQVITPHIGNKTLYIASGHYAKYGKDSFQPIHTPELGEEFLLKPMNCPHHCE 343 Query: 244 II-----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I K LPLR +R E + +G+ R F + + E E Sbjct: 344 IYKAFLRSYKELPLRLAEFGTVYRYERSG---ELQGLTRVRGFTQDDAHIFCSPEQVKEE 400 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 +++ I L+ + V + DL E W + E+ Sbjct: 401 LIKVIDIVRVIFCALNFNDYEVQISLRDLNNRIKYIGSEENWKNSEGAIIEV 452 >gi|332297469|ref|YP_004439391.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168] gi|332180572|gb|AEE16260.1| threonyl-tRNA synthetase [Treponema brennaborense DSM 12168] Length = 583 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 90/302 (29%), Gaps = 62/302 (20%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + + + + + GY EV P ++ +G K+ ++MF Sbjct: 199 DSPGQIFWHPNGWTIYRILEDYVRTKIKADGYVEVKTPFVMPQSLWERSGHWAKYKENMF 258 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + ++ ++ I K LPLR R+EA A G++R Sbjct: 259 ITESEKRIFALKPMNCPGHIEIFKQRIRSYKDLPLRMAEFGSCTRNEASGALH---GIMR 315 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV----------------- 320 F + + E +E + +++ K + Sbjct: 316 VRGFVQDDAHIFCTEAQIPSEVAKFCHLLKDMYKDFGFTDDKILVKFSTRPEKRVGDDAT 375 Query: 321 -SLCTGDLGFSACKTYDLEVWLAGQNLY----REISSCSTCG----------NFQ---SR 362 G L + + G+ + E + G ++Q + Sbjct: 376 WDRAEGALADACKQAGLAYEIQPGEGAFYGPKLEFTLVDALGREWQCGTIQVDYQLPSAE 435 Query: 363 RMNSRYRDPNSKSLKFTHTLN----GSGVAVGRCLIAILEN----------YLNADGSVT 408 R+N+ Y ++ L+ GS R + ++EN Y +V Sbjct: 436 RLNAEYIGDDNAKHHPV-MLHRAVLGSL---ERFIGILIENFAGAFPTWLHYQQ---TVV 488 Query: 409 IP 410 IP Sbjct: 489 IP 490 >gi|254441196|ref|ZP_05054689.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 307] gi|198251274|gb|EDY75589.1| threonyl-tRNA synthetase [Octadecabacter antarcticus 307] Length = 649 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 96/340 (28%), Gaps = 46/340 (13%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R + + ++++K + +I K + +R ++ E + Sbjct: 111 DRKEAFTPDDLGTIEKKMKEIINKRDAVRTE--VWDREVAIKYYEDRGEPYK--IELING 166 Query: 80 LKEQLPILEKEEHEVCSSLKKLISC---------IPNVPLEEVPIGTSANENILIRSVGK 130 + P+ + + + + ++ +L R G Sbjct: 167 IPGDEPLRMYWHGDWQDLCRGPHLQNTGQVPGDSWKLMSIAGAYWRGDSDRTMLQRIYGV 226 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMI 183 + H + E D + + A + L Q + Sbjct: 227 AFQNKEQLKAHLHMLEEAAKRDHRKLGREMNLFHMQEEASGQIFWHPNGWLIFTQLQDYM 286 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTN- 238 GY EV+ P +V + +G KF + MF R + + Sbjct: 287 RRKQRAGGYVEVNTPQVVDRKLWEQSGHWEKFQEHMFIVEVDEEHAREKAVNALKPMNCP 346 Query: 239 ----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +Y+ + + LP+R R E A G++R F + + EE Sbjct: 347 CHVQIYNQGLKSYRDLPVRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDGHIFCTEEQ 403 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 E ++ E+ + DLGFS K Sbjct: 404 IEVETIAFIALLSEVYQ--------------DLGFSDFKV 429 >gi|325679048|ref|ZP_08158642.1| threonine--tRNA ligase [Ruminococcus albus 8] gi|324109172|gb|EGC03394.1| threonine--tRNA ligase [Ruminococcus albus 8] Length = 648 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 92/307 (29%), Gaps = 38/307 (12%) Query: 43 KIEDIRARRNSNSAQIG--------------QAIAEGNLSLVDALKNETSTLKEQLPILE 88 +E I+A + + G + + E N L + + E+L Sbjct: 116 DLEKIQAEMKRLAKE-GYELERFELSHDEAVKLMQEKNEDFKLELIEKHDSKGEKLSFYR 174 Query: 89 KEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 + + I + G + + R G + EH + Sbjct: 175 QGDFVDLCAGPHIMSVAPIKAVKLTQCTGAYWGKVEDGIQMSRIYGTAYPKASMLEEHLK 234 Query: 144 IGEALGLMD---FDRATKLSGARFSVLTGHLAHLER-----ALGQFMIDLHTSEHGYTEV 195 E L D R + G L + Q I+ GY Sbjct: 235 QMEEAKLRDHNKLGRELDYFTTVDYIGQGLPILLPKGAKVIQTLQRWIEDEEYRRGYQLT 294 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT--SEVSLTNLYSHEII-----ESK 248 P + + E +G + D MF D + +T + +++ + Sbjct: 295 KTPFMSKRELYKISGHWDHYRDGMFILGDPDDETKECFALRPMTCPFQYQVFLNRKRSYR 354 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LP+R + FR E + G++R QF E I R E E + L+ A+ Sbjct: 355 DLPMRLGETSTLFRKEDSG---EMHGLIRVRQFTISEGHLIIRPEQLEDEFKGCLALAKY 411 Query: 309 ILKRLDL 315 L+ + L Sbjct: 412 CLETIGL 418 >gi|260433159|ref|ZP_05787130.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260416987|gb|EEX10246.1| threonyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 652 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 89/317 (28%), Gaps = 24/317 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K + +I K + + I A V+ ++ Sbjct: 114 DRAEPFTPEDLGLIEKKMKEIINKRDPVTTEIWDRERAIAFYKANNEPYKVELIEAIPGD 173 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + I + Sbjct: 174 EPVRMYWHGHWQDLCRGPHLQHTGQLPGDAFKLMSIAGAYWRGDSNRPMLQRIYGVAFTG 233 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 K + +H+ E + + D A + Q + Sbjct: 234 KEKLKAYLHMLEEAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTQLQDYMRRQQ 293 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ ++MF R + + E Sbjct: 294 RRGGYVEVNTPQVVDRKLWERSGHWDKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVE 353 Query: 244 II-----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I + LPLR R E A G++R F + + + E+ E Sbjct: 354 IFKQGLKSYRDLPLRMAEFGSCARYEPSGALH---GIMRVRGFAQDDAHIFSTEDQIGDE 410 Query: 299 HERMLSCAEEILKRLDL 315 R + ++ K L Sbjct: 411 CARFIGFLTDVYKDLGF 427 >gi|71908290|ref|YP_285877.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas aromatica RCB] gi|123733181|sp|Q47CM4|SYT_DECAR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71847911|gb|AAZ47407.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Dechloromonas aromatica RCB] Length = 638 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 53/165 (32%), Gaps = 6/165 (3%) Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 D A V + + +GY EV P ++ +G Sbjct: 251 DLFHMQDEAPGLVFWHPKGWAIWQEIEGYMRAVYRNNGYQEVRCPQILDKSLWEKSGHWE 310 Query: 214 KFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 + D+MF T + P + +++ + + LPLR+ R+E A Sbjct: 311 HYKDNMFTTSSENRDYAVKPMNCPGHVQVFNAGLRSYRELPLRYGEFGSCHRNEPAGALH 370 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ +E + +++ Sbjct: 371 ---GLMRVRGFVQDDGHIFCTEDQIESEVTAFNALVKKVYADFGF 412 >gi|307721910|ref|YP_003893050.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] gi|306980003|gb|ADN10038.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] Length = 602 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 76/215 (35%), Gaps = 11/215 (5%) Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE-----RALGQFMIDL 185 ++ E E KL R V G L RA + ++ Sbjct: 190 DKESLKAHMEQLAEAEKRDHRKIGNEMKLFTFREEVGAGFPIWLPAGGRLRARLESLLFK 249 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVSLTNLYSH 242 + GY V P ++R + +G + ++M+ T + P + V +Y Sbjct: 250 AHRKRGYEPVRGPEMLRSDLWMTSGHYQNYGENMYFTHIDELEFGVKPMNCVGHIKVYED 309 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 E+ + LP+++ R EA A G+ R +F + + R + + + Sbjct: 310 ELHSYRDLPIKYFEYGVVHRHEASGALH---GLFRVREFTQDDAHIFCRADQIEEQIIEV 366 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 + ++I+ + Y+++ + K +++ Sbjct: 367 VDFVDKIMSTFEFDYKMMISTKPEKAVGDDKVWEI 401 >gi|225627544|ref|ZP_03785581.1| threonyl-tRNA synthetase [Brucella ceti str. Cudo] gi|225617549|gb|EEH14594.1| threonyl-tRNA synthetase [Brucella ceti str. Cudo] Length = 693 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 146 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 205 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 206 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 265 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 266 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 325 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+AP ++ +G + D+MF L P + ++ Sbjct: 326 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 385 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 386 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 442 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 443 RINDLILSVYKDFGF 457 >gi|126729010|ref|ZP_01744825.1| threonyl-tRNA synthetase [Sagittula stellata E-37] gi|126710940|gb|EBA09991.1| threonyl-tRNA synthetase [Sagittula stellata E-37] Length = 660 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 52/424 (12%), Positives = 114/424 (26%), Gaps = 71/424 (16%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG---NLSLVDALKNE 76 R E + +++K + +I + +R S + I G + LV+A+ ++ Sbjct: 110 DRAEPFTPEDLGLIEKKMKEIINARDPVRTEVWSRADAIAHYEKTGENYKVELVNAIPDD 169 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENIL 124 + ++ + + +P + + + + Sbjct: 170 GQPI--RMYWHGDWQDLCRGPHLQNTGQVPGDAFKLMSVAGAYWRGDSKRQMLQRIYGVA 227 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 ++ +++ E + + D A V Q + Sbjct: 228 FKNRDDLKKHLNMLEEAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTIYTTLQEYMR 287 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------------TDGRWLI 229 GY E++ P +V + +G K+ MF + Sbjct: 288 RKQRAGGYQEINTPQVVDRKLWEASGHWEKYQHHMFIVEVDESRDGEHDDATAKNKEQTR 347 Query: 230 PTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + + ++ + LPLR R E A G++R F + Sbjct: 348 INALKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCARYEPSGALH---GIMRVRGFTQD 404 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLH-YRVVSLCTGDLGFSACKTYD------- 336 + E+ E R + +I + L + + + +++D Sbjct: 405 DAHIFCTEDQIEAECARFIEFLADIYRELGFPTFEIKFATRPEKRVGTEESWDYVENALE 464 Query: 337 --------LEVWLAGQNLYR----------EISSCSTCGNFQ-----SRRMNSRYRDPNS 373 G + I CG FQ R+ + Y PN Sbjct: 465 EAIRKTGRTYTLEPGDGAFYGPKLDFYLTDAIGRVWQCGTFQVDPNLPERLGASYIAPNG 524 Query: 374 KSLK 377 + Sbjct: 525 DKTR 528 >gi|88859310|ref|ZP_01133950.1| threonyl-tRNA synthetase [Pseudoalteromonas tunicata D2] gi|88818327|gb|EAR28142.1| threonyl-tRNA synthetase [Pseudoalteromonas tunicata D2] Length = 636 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 61/192 (31%), Gaps = 10/192 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+ Y EV PL++ +G K+AD MF Sbjct: 259 EAPGMVFWHNDGWSIYRELEDFVREKLREYKYEEVKGPLMMDRSLWEKSGHWDKYADAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LPLR R+E A G++R Sbjct: 319 TTVSEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALH---GLMR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + EE E + + + VV L T + D Sbjct: 376 VRGFTQDDAHIFCTEEQVMDEVSACIKMVYDTYETFGFEKIVVKLSTR----PENRIGDD 431 Query: 338 EVWLAGQNLYRE 349 W + E Sbjct: 432 ATWDQSEKALAE 443 >gi|90410628|ref|ZP_01218644.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK] gi|90328869|gb|EAS45153.1| threonyl-tRNA synthetase [Photobacterium profundum 3TCK] Length = 426 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 55/166 (33%), Gaps = 9/166 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + G F G E + I +E+ Y EV PL++ +G Sbjct: 254 FHMQQEAPGMVFWHHNGWTIFRE---LEVFIREKLTEYEYQEVKGPLMMDRVLWERSGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+A+ MF T + P + +++ + + LPLR R+E A Sbjct: 311 DKYAEAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + + + Sbjct: 371 H---GIMRVRGFTQDDAHVFCTENQVQQEVTSCIKMVYDTYQTFGF 413 >gi|229591579|ref|YP_002873698.1| threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25] gi|259516637|sp|C3JZN7|SYT_PSEFS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229363445|emb|CAY50645.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens SBW25] Length = 640 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPNGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + I +++ + + LP+R R+E A G++R Sbjct: 318 TTQSENRDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + EE E + ++ + Sbjct: 375 VRGFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDFGF 412 >gi|255262353|ref|ZP_05341695.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62] gi|255104688|gb|EET47362.1| threonyl-tRNA synthetase [Thalassiobium sp. R2A62] Length = 649 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 95/339 (28%), Gaps = 25/339 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K + +I +++R + + G V+ + Sbjct: 111 DRAEPFTPEDLGLIEKKMKEIINLRDEVRTEVWDRARAVKHYEDAGEPYKVELIDAIPGD 170 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG------------TSANENILIRS 127 ++ + + +P + + + + + Sbjct: 171 EPLRMYWHGDWQDLCRGPHLQNTGQVPADAFKLMSVAGAYWRGDSDRAMLQRIYGVAFTN 230 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 +H+ E + + D A V Q + Sbjct: 231 KEGLKKHLHMLEEAAKRDHRKLGREMDLFHMQEEAPGQVFWHPNGWTVYTELQDYMRRKQ 290 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHE 243 GY EV+ P +V + +G K+ ++MF R + + + Sbjct: 291 RAGGYVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQ 350 Query: 244 IIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 I + LPLR R E A G++R F + + RE+ E Sbjct: 351 IFNQGLKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGFTQDDGHIFCREDQVQEE 407 Query: 299 HERMLSCAEEILKRLDL-HYRVVSLCTGDLGFSACKTYD 336 + I K L +RV D + + +D Sbjct: 408 TAVYIEFLSTIYKDLGFEKFRVKYSDRPDTRAGSDEVWD 446 >gi|295099750|emb|CBK88839.1| threonyl-tRNA synthetase [Eubacterium cylindroides T2-87] Length = 391 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 11/189 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + + L L QF + HT + GY + P+++ E +G + ++M+ Sbjct: 10 APGMPIFLPNGMILRNILEQFWYEEHT-KAGYQFIKTPIMMSKELWETSGHWEHYKENMY 68 Query: 221 CTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + P + +Y+ + K LP R L R EA A G+ R Sbjct: 69 TTMVDDREFAIKPMNCPGALLVYNSSLHSYKELPYRIGELGQVHRHEASGAL---NGLFR 125 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + + +E + +L + I L Y + + G+ + Sbjct: 126 VRTFTQDDAHLFVTPDQIESEVKNVLGLIDRIYSVFGLPYDIELSTRPESGYIGSE---- 181 Query: 338 EVWLAGQNL 346 E+W + Sbjct: 182 EIWQKSEEA 190 >gi|77458158|ref|YP_347663.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] gi|123758422|sp|Q3KEY2|SYT_PSEPF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77382161|gb|ABA73674.1| putative threonyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] Length = 640 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 50/160 (31%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + ++GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPNGWTLYQVLEQYMRKVQRDNGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + EE E + ++ + Sbjct: 373 MRVRAFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDFGF 412 >gi|167042805|gb|ABZ07523.1| putative tRNA synthetase class II core domain (G, H, P, S and T) [uncultured marine microorganism HF4000_ANIW137I15] Length = 627 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 106/344 (30%), Gaps = 28/344 (8%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRAR-----RNSNSAQIGQAIAEGNLS-----LVDA 72 + + + D+ R + ++ +IRA R S + + + + L+D Sbjct: 90 YDFDRDEPFTPDDLER-IETRMREIRAENRPFVREPVSKEEARKLFQERDEPYKLELLDG 148 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + +ET ++ Q L+ I + + + +L R G Sbjct: 149 IPDETVSIYRQGEWLDL-CRGPHVPSTGFIEAVKLLSVAGAYWRGDERNKMLQRIYGTSF 207 Query: 133 SAIHLSREHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMI 183 EH E D K +G+ H A L + + +F Sbjct: 208 PTQEALDEHLAHLEEARRRDHRVLGKELGLFLIHEQAGSGLVYWLPHGAVLRKVIERFWE 267 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSEVSL-TNLY 240 D H GY V P LV +G + ++MF ++ +Y Sbjct: 268 DEHV-RRGYELVVIPHLVHSRLFRTSGHYDFYKENMFTLEVDGEEYVAKPMNCPGHILIY 326 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 +E + LP+R+ + +R+E GMLR F + + E E Sbjct: 327 QNERRSYRDLPIRYAEMGTVYRNERSGVLH---GMLRVRGFTQDDAHIFCTPEQLPGEIL 383 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 +L +L + L D + W A + Sbjct: 384 GVLDMTLFMLATFGFERFEIELSVRDPAHPEKYAGSDDEWKAAE 427 >gi|157964288|ref|YP_001499112.1| threonyl-tRNA synthetase [Rickettsia massiliae MTU5] gi|157844064|gb|ABV84565.1| Threonyl-tRNA synthetase [Rickettsia massiliae MTU5] Length = 651 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 64/202 (31%), Gaps = 10/202 (4%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A+ V + I ++GYTEV P+LV +G Sbjct: 264 RELDLFHFQEEAQGMVFWHDKGWSIYNTIEQYIRKKIRKNGYTEVKTPVLVDKSLWEVSG 323 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 KF DDMF + ++ ++ I + LPLR + R+EA Sbjct: 324 HWAKFRDDMFVLETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASG 383 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R + + EE E E+ K V Sbjct: 384 ALH---GLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDR-- 438 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 + EVW +N +E Sbjct: 439 --PEVRAGSDEVWDKAENALKE 458 >gi|332993607|gb|AEF03662.1| threonyl-tRNA synthetase [Alteromonas sp. SN2] Length = 638 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 92/314 (29%), Gaps = 41/314 (13%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL--P 85 E I L + R+L + +N S Q DA + T K ++ Sbjct: 115 EDIQKL--EKRMLQLAKTNYNVVKNKVSWQ----------EARDAFEARGETYKMEILDE 162 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE----- 140 + ++ ++ + + + + + + + S + + Sbjct: 163 NISHDDRPGLYHHEEYVDMCRGPHVPNMKFCQNFKLMKVAGAYWRGDSDNKMLQRIYGTA 222 Query: 141 ---------HFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMID 184 + + E D + K A V + + + Sbjct: 223 WADKKQLKAYLQRLEEAEKRDHRKIGKALNLFHWQEEAPGMVFWHNDGWSIYTELEKFVR 282 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYS 241 ++ Y EV PL++ +G K+A++MF T + ++ +++ Sbjct: 283 EKLRDYTYDEVKGPLMMDRSLWEKSGHWEKYAENMFTTESEKREYAIKPMNCPGHVQIFN 342 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + + LPLR R+E A G++R F + + EE E Sbjct: 343 QGLKSYRDLPLRMAEFGCCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQILEEVSG 399 Query: 302 MLSCAEEILKRLDL 315 + E Sbjct: 400 CIKMVYETYAAFGF 413 >gi|270290442|ref|ZP_06196667.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|304384676|ref|ZP_07367022.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284] gi|270281223|gb|EFA27056.1| threonyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|304328870|gb|EFL96090.1| threonine--tRNA ligase [Pediococcus acidilactici DSM 20284] Length = 647 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 111/340 (32%), Gaps = 23/340 (6%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + + + ++++K + +I+ + S + A + + +K K Sbjct: 112 GQQISVDELPAIEDKMKDMIQAKVALSHEM--LSVEDALAKVDSDPYQAKLVKKNAKDGK 169 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE- 140 + ++ S + + L V ++ ++ ++ Sbjct: 170 VNVYDVDGSLIVSDCVALPDASGLKAIKLLSVAGAYWEGKSSNPMLQRIYGTSFFNQKDL 229 Query: 141 -----------HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 + +D GA + A + R + +++ID + Sbjct: 230 DAELARQKEARERDHRVIGNDLDLFFVDPEVGAGLPYWMPNGATIRRTIERYIIDKEV-Q 288 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEI 244 HGY V P+L+ +A +G + +DMF D L P + S +Y H I Sbjct: 289 HGYQHVYTPVLMNLDAYKTSGHWQHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHI 348 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LPLR L R E A G+ R + + + + E +++L Sbjct: 349 RSYRELPLRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVAPDQIQEEFKKVLQ 405 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E+ + D+ L D + D E+W Q Sbjct: 406 LMVEVYRDFDITDYTFRLSYRDPENTEKYFDDDEMWNHSQ 445 >gi|282599730|ref|ZP_05971662.2| threonine--tRNA ligase [Providencia rustigianii DSM 4541] gi|282568410|gb|EFB73945.1| threonine--tRNA ligase [Providencia rustigianii DSM 4541] Length = 653 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 49/166 (29%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + + Y EV P ++ TG Sbjct: 262 LDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKSYNYQEVKGPFMMDRVLWERTGHW 321 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 322 ENYKDAMFTTSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 381 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ +E + ++ Sbjct: 382 H---GLMRVRGFTQDDAHIFCTEDQILSEVTSCIEMIYDVYSTFGF 424 >gi|315126513|ref|YP_004068516.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] gi|315015027|gb|ADT68365.1| threonyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] Length = 636 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+ Y EV P+++ +G K+++ MF Sbjct: 259 EAPGMVFWHNDGWSIYRELEEFVREKLREYQYEEVKGPMMMDRSLWEKSGHWEKYSEAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LPLR R+E A G++R Sbjct: 319 TTESEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALH---GLMR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + EE E + + + Sbjct: 376 VRGFTQDDAHVFCTEEQIMDEVSACIKMVYDTYETFGF 413 >gi|94495624|ref|ZP_01302204.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58] gi|94425012|gb|EAT10033.1| threonyl-tRNA synthetase [Sphingomonas sp. SKA58] Length = 665 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 98/344 (28%), Gaps = 38/344 (11%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQLP 85 E + +++ + R +I + ++ I Q A G + A + L Sbjct: 117 EDLPAIEAEMRKIIAADKPLKREVIDRDTLIAQWEAAGETFKAQWAAELPQGEELTVYHS 176 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEV---------PIGTSANENILIRSVGKKPSAIH 136 E + + +L R G Sbjct: 177 GAPGSEGSWYDMCRGPHLASTGKLDPQAFRLTRVSGAYWRGDQKNAMLSRIYGTGWLNKK 236 Query: 137 LSREHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 EH E G D D A SV ++ + + + Sbjct: 237 QLAEHLTRLEEAGKRDHRKLGAEMDLFHLQQEAHGSVFWHPKGYVIWRNLEAYMRRAIDD 296 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------------GRWLIPTS 232 GY EV P ++ +G K+ ++MF D L P + Sbjct: 297 AGYREVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVEDEGPLVSDDADWMALKPMN 356 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + ++ I + LPLRF R+E A G++R QF + + RE Sbjct: 357 CPAHVLIFRQGIKSYRDLPLRFYENGCCHRNEPHGALH---GLMRVRQFTQDDAHIFCRE 413 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 + E + A+ I K Y + + F + +D Sbjct: 414 DQIVEEVRAFCALADRIYKDFGFTYSIKLALRPEKRFGTEEMWD 457 >gi|298530062|ref|ZP_07017464.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298509436|gb|EFI33340.1| threonyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 646 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 63/171 (36%), Gaps = 7/171 (4%) Query: 150 LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 +D ++ +G + A + L F H GY V P ++R E + Sbjct: 249 QLDLFSFSEEAGPGMPIFHPKGALIRTILEDFERKEHL-RRGYQIVQGPQILRRELWEKS 307 Query: 210 GQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 G + ++M+ T + ++ +Y ++ + LPLR+ L R E Sbjct: 308 GHYDNYRENMYFTHIDEQVYGVKPMNCLSHMLIYKSKLRSYRDLPLRYFELGRVHRHEKS 367 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 G+LR +F + + + R + E +++ +++ Y Sbjct: 368 GVLH---GLLRVREFTQDDAHILCRPDQLQDEITGVVNFVRDVMGLFGFEY 415 >gi|329904275|ref|ZP_08273747.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327548052|gb|EGF32784.1| Threonyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 635 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 60/197 (30%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + ++GY EV AP ++ +G Sbjct: 250 LDLFHFQEEAPGMIFWHPKGWSVWQQVEQYMRRVYQDNGYQEVKAPQILDISLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T + ++ ++ ++ + LPLR+ R+E + Sbjct: 310 ENYKENMFTTESEKRSYALKPMNCPGHVQIFRSDMRSYRDLPLRYGEFGQCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + ++ + T Sbjct: 370 H---GIMRVRGFTQDDGHIFCTEDQILEECVAYTALLHKVYADFGFANITYKVATR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 + E W +N Sbjct: 423 PEKRVGSEEAWDKAENA 439 >gi|212711437|ref|ZP_03319565.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM 30120] gi|212685893|gb|EEB45421.1| hypothetical protein PROVALCAL_02510 [Providencia alcalifaciens DSM 30120] Length = 653 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 48/166 (28%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + + Y EV P ++ TG Sbjct: 262 LDLYHMQEEAPGMAFWHNDGWTIFRELETFVRTKLKSYNYQEVKGPFMMDRVLWERTGHW 321 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 322 ENYKDAMFTTSSENREYCVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 381 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E + ++ Sbjct: 382 H---GLMRVRGFTQDDAHIFCTEDQILGEVTSCIEMIYDVYSTFGF 424 >gi|329895719|ref|ZP_08271123.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328922195|gb|EGG29550.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 641 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + + GY E+ P +V + +G Sbjct: 250 LDLFHTQEEAPGMVFWHPKGWTVYQVIEQYMRNRQRQEGYKEIKTPQVVDMTLWHKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DDMF ++ +++ + + LPLR R+E + Sbjct: 310 DKFGDDMFMLKAEDREFAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ E R + + + Sbjct: 370 H---GIMRVRGFTQDDAHIFCTEDQIQPEVSRFIDFLHGVYEDFGF 412 >gi|237736526|ref|ZP_04567007.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229421568|gb|EEO36615.1| threonyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 638 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 100/318 (31%), Gaps = 21/318 (6%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS-TLKEQLPI 86 E + ++ + + ++K+ E I + I G V+ +K + Sbjct: 115 EDLAKIEAEMKKIVKENEKIERVMMTREDAIKHFEELGEEYKVEIIKEIAQGEMLSFYKQ 174 Query: 87 LEKEEHEVCSS--LKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 E + + + +++ +L R G + +++ + Sbjct: 175 GEFMDLCRGPHVPSTSYLKAFKLKSVAGAYWRGNSDNKMLQRIYGFAFADEKKLKDYLTL 234 Query: 145 GEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 E D + K F + + L HT GYTE+ Sbjct: 235 LEEAEKRDHRKLGKELDLFFVSEYGPGFPIFLPKGMAIRNTLINLWKREHT-LAGYTEIM 293 Query: 197 APLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV---SLTNLYSHEIIESKSLPLR 253 P+++ E +G + ++M+ +T + Y +++ K LP+R Sbjct: 294 TPIMLNKELWETSGHWYNYRENMYTSTIDETEFAIKPMNCPGGIIAYKYQLHSYKDLPIR 353 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR- 312 L R E A G++R F + + E E +++ ++ + Sbjct: 354 CGELGTVHRHEFSGALH---GLMRVRCFTQDDAHIFMTPEQIEEEIIGVVNLIDKFYSKL 410 Query: 313 --LDLHYRVVSLCTGDLG 328 + H + + +G Sbjct: 411 FGFEYHIELSTKPEKAIG 428 >gi|134301672|ref|YP_001121640.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|166223343|sp|A4IX68|SYT_FRATW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|134049449|gb|ABO46520.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] Length = 634 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 55/421 (13%), Positives = 124/421 (29%), Gaps = 85/421 (20%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + ++ + + ++ K + K ++ +E + Sbjct: 119 TIEKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQMKIYTQDNFSD 178 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------------REHFEIGEALG 149 + + + L + + S + ++ + E Sbjct: 179 LCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238 Query: 150 LMDFDRATKLSGARFS--------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 D + K+ + + R + +M + +++G +E+ PL+ Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASN-NKYGCSEIRTPLIA 297 Query: 202 RDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +G K+A++MF T + P + + +Y+ ++ + LP+R Sbjct: 298 DFSLWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFG 357 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+E + G+LR F + + E E M+ E+ K + Sbjct: 358 IVHRNEPSGSLH---GLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDF 414 Query: 319 VVSLCTGDLGFSACKTYDLEVW--------------------LAGQNLYR---------- 348 + + + D E W L G+ + Sbjct: 415 AIKIALR----PENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKD 470 Query: 349 EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLN----GSGVAVGRCLIAILEN 399 I CG Q +R+ + Y D N + L+ GS R + ++E+ Sbjct: 471 AIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPV-MLHRAIVGSL---ERFIGMLIEH 526 Query: 400 Y 400 Y Sbjct: 527 Y 527 >gi|187931727|ref|YP_001891712.1| threonyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|238691566|sp|B2SGS3|SYT_FRATM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|187712636|gb|ACD30933.1| threonyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] Length = 634 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 56/421 (13%), Positives = 124/421 (29%), Gaps = 85/421 (20%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + ++ + + ++ K + K ++ +E + Sbjct: 119 TIEKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQMKIYTQDNFSD 178 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------------REHFEIGEALG 149 + + + L + + S + ++ + E Sbjct: 179 LCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238 Query: 150 LMDFDRATKLSGARFS--------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 D + K+ + + R + +M + +++G +E+ PL+ Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASN-NKYGCSEIRTPLIA 297 Query: 202 RDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +G K+A++MF T + P + + +Y+ ++ + LP+R Sbjct: 298 DFSLWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFG 357 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+E + G+LR F + + E E M+ E+ K + Sbjct: 358 IVHRNEPSGSLH---GLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDF 414 Query: 319 VVSLCTGDLGFSACKTYDLEVW--------------------LAGQNLYR---------- 348 V + + D E W L G+ + Sbjct: 415 AVKIALR----PENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKD 470 Query: 349 EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLN----GSGVAVGRCLIAILEN 399 I CG Q +R+ + Y D N + L+ GS R + ++E+ Sbjct: 471 AIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPV-MLHRAIVGSL---ERFIGMLIEH 526 Query: 400 Y 400 Y Sbjct: 527 Y 527 >gi|326386620|ref|ZP_08208242.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium nitrogenifigens DSM 19370] gi|326208935|gb|EGD59730.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Novosphingobium nitrogenifigens DSM 19370] Length = 663 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 20/202 (9%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 + D + A SV + + + GY EV P ++ +G Sbjct: 257 EMDLFHLQAEAHGSVFWHPKGYRIWRELEAYMRRAIDGAGYREVKTPQVMDARQWEASGH 316 Query: 212 IPKFADDMFCTTD-----------------GRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 K+ ++MF D L P + + ++ I + LPLRF Sbjct: 317 WGKYRENMFVIPDEVPNVEDEGPLVSDDAAWMALKPMNCPAHVLIFRQGIKSYRELPLRF 376 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 R+E A G++R QF + + RE+ E A+ I K Sbjct: 377 YENGCCHRNEPHGALH---GLMRVRQFTQDDAHIFCREDQIVEEVRAFCELADRIYKDFG 433 Query: 315 LHYRVVSLCTGDLGFSACKTYD 336 Y + + F + + +D Sbjct: 434 FTYAIKLALRPEKRFGSDEMWD 455 >gi|56707928|ref|YP_169824.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670399|ref|YP_666956.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|224457008|ref|ZP_03665481.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370416|ref|ZP_04986421.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874733|ref|ZP_05247443.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|73919791|sp|Q5NGL8|SYT_FRATT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123063497|sp|Q14I20|SYT_FRAT1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56604420|emb|CAG45450.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320732|emb|CAL08833.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|151568659|gb|EDN34313.1| hypothetical protein FTBG_00181 [Francisella tularensis subsp. tularensis FSC033] gi|254840732|gb|EET19168.1| threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159111|gb|ADA78502.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 634 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 56/421 (13%), Positives = 124/421 (29%), Gaps = 85/421 (20%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + ++ + + ++ K + K ++ +E + Sbjct: 119 TIEKKMKELAKKSAPISYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQMKIYTQDNFSD 178 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------------REHFEIGEALG 149 + + + L + + S + ++ + E Sbjct: 179 LCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238 Query: 150 LMDFDRATKLSGARFS--------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 D + K+ + + R + +M + +++G +E+ PL+ Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASN-NKYGCSEIRTPLIA 297 Query: 202 RDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +G K+A++MF T + P + + +Y+ ++ + LP+R Sbjct: 298 DFSLWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFG 357 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+E + G+LR F + + E E M+ E+ K + Sbjct: 358 IVHRNEPSGSLH---GLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDF 414 Query: 319 VVSLCTGDLGFSACKTYDLEVW--------------------LAGQNLYR---------- 348 V + + D E W L G+ + Sbjct: 415 AVKIALR----PENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKD 470 Query: 349 EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLN----GSGVAVGRCLIAILEN 399 I CG Q +R+ + Y D N + L+ GS R + ++E+ Sbjct: 471 AIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPV-MLHRAIVGSL---ERFIGMLIEH 526 Query: 400 Y 400 Y Sbjct: 527 Y 527 >gi|146307004|ref|YP_001187469.1| threonyl-tRNA synthetase [Pseudomonas mendocina ymp] gi|166225482|sp|A4XTS1|SYT_PSEMY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145575205|gb|ABP84737.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Pseudomonas mendocina ymp] Length = 640 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+GY EV P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHPNGWTVYQVLEQYMRQVQRENGYVEVRTPQVVDRILWERSGHW 309 Query: 213 PKFADDMFCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T + + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTASENRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + ++ + L T Sbjct: 370 H---GIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLQVYADFGFTDIAMKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 A + E+W + Sbjct: 423 PAKRVGSEELWDRAEGA 439 >gi|218961058|ref|YP_001740833.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] gi|167729715|emb|CAO80627.1| threonyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans] Length = 633 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 95/314 (30%), Gaps = 24/314 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNET- 77 R E + ++ K + L + + R S + + +E N + L + Sbjct: 107 DRDEPFTEEDLQKIEAKMQEL--STQALPYYRTELSKEEAIKLFSEMNETYKLELLEDIP 164 Query: 78 -STLKEQLPILEKEEHEVCSSLKKLISCIPNVPL--EEVPIGTSANENILIRSVGKKPSA 134 + + + L L +L R G Sbjct: 165 EGEIISSYRQGDFIDLCRGPHLPDTGKIKAIKLLRTSGAYWRGDEKNKMLKRIYGISFPT 224 Query: 135 IHLSREHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDL 185 ++ E D + K G + A + + + + Sbjct: 225 EKELTDYLHFLEEASKRDHRKLGKDLELFSISDEVGPGLVLWHPKGAMVRHLIETYWKEQ 284 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYS 241 H + GY V P L R +G + + ++M+ ++ P + ++Y+ Sbjct: 285 HL-KKGYQLVYTPHLGRANLWETSGHLDFYKENMYSKMDIEGQDYYIKPMNCPFHISIYN 343 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + + LP+R L +R E G++R F + + I E E ++ Sbjct: 344 SSLHSYRELPIRLAELGTVYRYERSGVLH---GLMRVRGFTQDDAHIICTPEQMDMEVDK 400 Query: 302 MLSCAEEILKRLDL 315 ++ + ++LK Sbjct: 401 LIVFSLDMLKAFGF 414 >gi|303257521|ref|ZP_07343533.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|331000214|ref|ZP_08323898.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859] gi|302859491|gb|EFL82570.1| threonine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|329572380|gb|EGG54033.1| threonine--tRNA ligase [Parasutterella excrementihominis YIT 11859] Length = 641 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 60/201 (29%), Gaps = 6/201 (2%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + +H+ E + + D A + Sbjct: 215 QRIYGTAWAKKDDMAAYLHMLEEAEKRDHRRLGKELDLFHFQEEAPGLIFWHARGWALWQ 274 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL- 236 + + ++ Y EV AP L+ +G K+ ++MF T ++ Sbjct: 275 QVEQYMRRVYQDNDYQEVKAPQLLDRSLWEKSGHWSKYKENMFTTESENRYYALKPMNCP 334 Query: 237 --TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +++ + + LP+R+ R+E + G++R F + + E+ Sbjct: 335 GHIQIFNSAVRSYRDLPIRYGEFGACHRNEPSGSLH---GLMRVRGFTQDDGHIFCTEDQ 391 Query: 295 SFTEHERMLSCAEEILKRLDL 315 +E +++ Sbjct: 392 ILSECTAYTKLVQKVYADYGF 412 >gi|89256700|ref|YP_514062.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|156502860|ref|YP_001428925.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010452|ref|ZP_02275383.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC200] gi|254368007|ref|ZP_04984027.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica 257] gi|290954131|ref|ZP_06558752.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295312449|ref|ZP_06803221.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|122999730|sp|Q2A2J0|SYT_FRATH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166223341|sp|A7NDB6|SYT_FRATF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|89144531|emb|CAJ79846.1| Threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|134253817|gb|EBA52911.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica 257] gi|156253463|gb|ABU61969.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 634 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 98/327 (29%), Gaps = 42/327 (12%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + ++ + + ++ K + K ++ +E + Sbjct: 119 TIEKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQMKIYTQDNFSD 178 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------------REHFEIGEALG 149 + + + L + + S + ++ + E Sbjct: 179 LCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238 Query: 150 LMDFDRATKLSGARFS--------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 D + K+ + + R + +M + +++G +E+ PL+ Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASN-NKYGCSEIRTPLIA 297 Query: 202 RDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +G K+A++MF T + P + + +Y+ ++ + LP+R Sbjct: 298 DFSLWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFG 357 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+E + G+LR F + + E E M+ E+ K + Sbjct: 358 IVHRNEPSGSLH---GLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDF 414 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQN 345 V + + D E W + Sbjct: 415 AVKIALR----PENRIGDDETWDKSEQ 437 >gi|103486185|ref|YP_615746.1| threonyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] gi|123380057|sp|Q1GVA9|SYT_SPHAL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|98976262|gb|ABF52413.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] Length = 667 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 95/342 (27%), Gaps = 39/342 (11%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++E+ R +I + +R A I + +G + + E++ + Sbjct: 122 EELPLIEEEMRRIIAADKPLRREVWDRDALIARWKKDGETFKAEWAAELPA--GEEISVY 179 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS---------AIHLS 138 + + T + Sbjct: 180 -WSGDDWMDMCRGPHLASTGKLDPAAFKLTRVSGAYWRGDQKNAQLSRIYGTGWLNRKQL 238 Query: 139 REHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 EH E D R + A SV + + + G Sbjct: 239 AEHLVRLEEAAKRDHRRLGQEMDLFHLQQEAHGSVFWHPNGFVVWRELEAYMRRAIDAAG 298 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------------GRWLIPTSEV 234 Y EV P ++ +G K+ ++MF D L P + Sbjct: 299 YREVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGPIVSDDAEWMALKPMNCP 358 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 + ++ + + LPLR R+E A G++R QF + + RE+ Sbjct: 359 AHVLIFRQGMKSYRDLPLRLYENGCCHRNEPHGALH---GLMRVRQFTQDDAHIFCREDQ 415 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 E + A+ I K Y + + F + +D Sbjct: 416 IVEEVRNFCALADRIYKDFGFTYAIKLALRPEKRFGSDAMWD 457 >gi|319935875|ref|ZP_08010301.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1] gi|319809142|gb|EFW05623.1| threonyl-tRNA synthetase [Coprobacillus sp. 29_1] Length = 581 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 74/229 (32%), Gaps = 15/229 (6%) Query: 100 KLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 K+ + + +L R G + + + E D + + Sbjct: 134 KMCKNFKLLKHSGAYWKGDKDNKVLQRIYGVCFPTPEELQAYLDFLEEAKKRDHKKLGRE 193 Query: 160 SG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 H L L +F D HT E GY + P+++ E +G Sbjct: 194 LDLFMMSEYAPGMPFFLPHGMLLRNELEKFWYDEHTKE-GYEFIKTPIMMSKELWEVSGH 252 Query: 212 IPKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 + ++M+ + P + +Y + + K LP+R L R EA A Sbjct: 253 WYNYKENMYTSLVDEREFAIKPMNCPGSLLVYKNGLHSYKDLPIRMGELGQVHRHEASGA 312 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 G+ R F + + + +E R+++ + + L L Y Sbjct: 313 L---NGLFRVRTFTQDDAHIFMTPDQIESEVVRLIAFIDRVYSMLGLSY 358 >gi|266620391|ref|ZP_06113326.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288868018|gb|EFD00317.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 633 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 64/194 (32%), Gaps = 16/194 (8%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G F L+ AL F ++H GY E++ P+++ +G + ++M+ Sbjct: 258 GPGFPFFLPKGMVLKNALTNFWREIH-EREGYVEIATPIMLNRSLWETSGHWDHYKENMY 316 Query: 221 CTTDGRWLIPTSEV---SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 TT + +Y + + LPLR L R E A G++R Sbjct: 317 TTTIDDTEFAIKPMNCPGSMLVYKSQPRSYRDLPLRMGELGLVHRHEKSGALH---GLMR 373 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCA--EEILKRLDLHYRVVSLCTGDLGFSACKTY 335 F + + E E + ++ + H + + +G Sbjct: 374 VRCFTQDDAHIYMTPEQITDEIKGVVRLIDEVYNMFGFKYHVELSTRPEDSMG------- 426 Query: 336 DLEVWLAGQNLYRE 349 E W N RE Sbjct: 427 SDEDWEMATNSLRE 440 >gi|256826891|ref|YP_003150850.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium curtum DSM 15641] gi|256583034|gb|ACU94168.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Cryptobacterium curtum DSM 15641] Length = 586 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 7/169 (4%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G F + L+ AL Q+ +++ +GY +V P+++ + +G + ++M+ Sbjct: 211 GPGFPFWLPNGMRLKNALTQYWMEMQ-EAYGYEQVDTPIILSRKLWETSGHWDHYKENMY 269 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + P + +Y + + LPL+ R E A G+ R Sbjct: 270 TTVIDDEDYAVKPMNCPGACLIYKSKPRSYRDLPLKLAEAGKDHRHELKGALH---GLFR 326 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 F + + R + + ++ YRV D Sbjct: 327 VRAFTQDDAHLFIRPDQITEQVTDTAHLITAYYEQFGFPYRVELSTRPD 375 >gi|294852343|ref|ZP_06793016.1| threonyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|294820932|gb|EFG37931.1| threonyl-tRNA synthetase [Brucella sp. NVSL 07-0026] Length = 683 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 136 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 195 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 196 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 255 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 256 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGAGVVFWHAKGWKMFQNLVSYMRRRLDS 315 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+AP ++ +G + D+MF L P + ++ Sbjct: 316 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 375 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 376 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 432 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 433 RINDLILSVYKDFGF 447 >gi|26989188|ref|NP_744613.1| threonyl-tRNA synthetase [Pseudomonas putida KT2440] gi|38258320|sp|Q88K27|SYT_PSEPK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|24984027|gb|AAN68077.1|AE016439_12 threonyl-tRNA synthetase [Pseudomonas putida KT2440] gi|313499446|gb|ADR60812.1| ThrS [Pseudomonas putida BIRD-1] Length = 640 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+GY E+ P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRGVQRENGYQEIKTPQVVDRILWERSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T+ + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTSSESRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + ++ K + L T Sbjct: 370 H---GIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDFGFSDIAMKLSTR---- 422 Query: 330 SACKTYDLEVW 340 A + E+W Sbjct: 423 PAKRVGSEELW 433 >gi|312881548|ref|ZP_07741334.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309370825|gb|EFP98291.1| threonyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 642 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 85/343 (24%), Gaps = 35/343 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSA-QIGQAIAEGNLSLVDALKN------ETSTLKEQL 84 +D + + + +E I R + + + + + L E + Sbjct: 106 DIDLEQSLTQEDLEKIEKRMKELAKTKYAVVKKKVSWQEARDAFEGRRETYKMEILDENV 165 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 ++ + + T + + Sbjct: 166 SRDDRPGLYHHEEYIDMCRGPHVPHMGFCQHFTLLSIAGAYWRGNSDNKMLQRIYGTAFH 225 Query: 145 GEALGLMDFDRATKLSG------------ARFSVLTGHLAHLERALGQFMID------LH 186 + R + + + D Sbjct: 226 DKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVREK 285 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +E+ Y EV PL++ +G K+AD MF T L P + +++ Sbjct: 286 LTEYDYQEVKGPLIMDRVLWERSGHWDKYADAMFTTASENRDYALKPMNCPGHVQIFNQG 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E A G++R F + + E E + Sbjct: 346 LKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTSCI 402 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + V L T + E+W + Sbjct: 403 KMVYDTYETFGFSNIAVKLSTR----PEKRVGSDEIWDESEQA 441 >gi|257464982|ref|ZP_05629353.1| threonyl-tRNA synthetase [Actinobacillus minor 202] gi|257450642|gb|EEV24685.1| threonyl-tRNA synthetase [Actinobacillus minor 202] Length = 643 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 89/312 (28%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + I+ + R + + + ++ + E + + Sbjct: 105 DIDLDRSLTQEDIDALEKRMLELAKTNYDVVKKRVSWQEARDTFESRGEPYKMAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR-------- 139 K++H ++ I + + + + + S + + Sbjct: 165 SKDDHPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWA 224 Query: 140 ------EHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 ++ + E D D A V + + + Sbjct: 225 DKKQLADYLQRLEEAAKRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG +AD MF T + P + +++ Sbjct: 285 LKEYDYQEVKGPFMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP+R R+E + G++R F + + EE +E + Sbjct: 345 LKSYRDLPIRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIESEVTSCI 401 Query: 304 SCAEEILKRLDL 315 +I Sbjct: 402 KMVYDIYSTFGF 413 >gi|237815491|ref|ZP_04594489.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|237790328|gb|EEP64538.1| threonyl-tRNA synthetase [Brucella abortus str. 2308 A] Length = 693 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 146 RNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQ 205 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 206 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 265 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 266 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 325 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+ P ++ +G + D+MF L P + ++ Sbjct: 326 HGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIF 385 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 386 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 442 Query: 301 RMLSCAEEILKRLDL 315 + + K Sbjct: 443 HINDLILSVYKDFGF 457 >gi|161621305|ref|YP_583315.2| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 635 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 17/187 (9%) Query: 141 HFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 + + E D R K A V + + + GY Sbjct: 231 YLHMLEEAEKRDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQAGYE 290 Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESK 248 EV P ++ +G + ++MF T + + + +++H + + Sbjct: 291 EVRTPQVMDRSLWERSGHWDNYKENMFVTESEK--RDYAIKPMNCPGHVQIFNHGLRSYR 348 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LPLR R+E A G++R F + + EE E + A Sbjct: 349 DLPLRLAEFGACHRNEPSGALH---GLMRVRGFVQDDAHIFCTEEQIVEEAKAFNELAFS 405 Query: 309 ILKRLDL 315 I Sbjct: 406 IYDDFGF 412 >gi|295093898|emb|CBK82989.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Coprococcus sp. ART55/1] Length = 587 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 102/342 (29%), Gaps = 29/342 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + +++++ + + ++ + +I + A + + + L++ Sbjct: 59 EDLAAIEKEMKKI------AKSGKKIIRKEISKEEALEMFKDDEYKLDLINGLEDGTITC 112 Query: 88 EKEEHEVCSSLKKL------ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 ++ + + +L R G EH Sbjct: 113 YEQGDFTDLCRGPHVDNVKLCRNFKLIRHSGAYWKGDSKNKVLQRIYGVCFPTKEELEEH 172 Query: 142 FEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 ++ E D + K L G + + + L ++ + GY Sbjct: 173 LQLLEEAKERDHRKIGKDMQLFMVDDLVGRGLPMFLPKGYTVWQELENYIKRKE-RKLGY 231 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT----NLYSHEIIESK 248 V P + +G + D+MF + +Y++++ K Sbjct: 232 LHVMTPCVGTVNLYKTSGHWDHYKDNMFPAMEMEGESFVLRPMNCPHHMMIYANKMHSYK 291 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LP+R +A FR EA +G+ R F + + + E ++ + Sbjct: 292 DLPIRIAEIAHDFRFEASG---TLKGIERGRHFCQNDSHIFVTPDQIEEEFAGVVKLIFD 348 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 K + L D D E+W +N R++ Sbjct: 349 TYKDFGITDYRCVLSLRDPEDKVKYHDDDEMWNKAENALRKV 390 >gi|254481727|ref|ZP_05094970.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214037856|gb|EEB78520.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 640 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 49/166 (29%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + +H Y E+ P LV +G Sbjct: 250 LDLFHTQEEAPGMVFWHPAGWSIYQTIEQYMREGQQQHDYQEIKTPQLVDLSLWKKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF DDMF ++ +++ + + LPLR R+E + Sbjct: 310 DKFGDDMFMLKAEDREFAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + + + Sbjct: 370 H---GIMRVRGFVQDDAHIFCTEEQIQPEVSSFIDFLHSVYEDFGF 412 >gi|104781106|ref|YP_607604.1| threonyl-tRNA synthetase [Pseudomonas entomophila L48] gi|123079219|sp|Q1IC15|SYT_PSEE4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|95110093|emb|CAK14798.1| threonyl-tRNA synthetase [Pseudomonas entomophila L48] Length = 640 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+GY E+ P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRQVQRENGYQEIKTPQVVDRILWERSGHW 309 Query: 213 PKFADDMFCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T + + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTSSENRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + ++ K + L T Sbjct: 370 H---GIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDFGFTDVAMKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 A + E+W + Sbjct: 423 PAKRVGSEELWDRAEGA 439 >gi|254369559|ref|ZP_04985570.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] gi|157122513|gb|EDO66648.1| threonyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] Length = 634 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 98/327 (29%), Gaps = 42/327 (12%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + ++ + + ++ K + K ++ +E + Sbjct: 119 TIEKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQMKIYTQDNFSD 178 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------------REHFEIGEALG 149 + + + L + + S + ++ + E Sbjct: 179 LCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238 Query: 150 LMDFDRATKLSGARFS--------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 D + K+ + + R + +M + +++G +E+ PL+ Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASN-NKYGCSEIRTPLIA 297 Query: 202 RDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +G K+A++MF T + P + + +Y+ ++ + LP+R Sbjct: 298 DFSLWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFG 357 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+E + G+LR F + + E E M+ E+ K + Sbjct: 358 IVHRNEPSGSLH---GLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDF 414 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQN 345 V + + D E W + Sbjct: 415 AVKIALR----PENRIGDDETWDKSEQ 437 >gi|291522045|emb|CBK80338.1| prolyl-tRNA synthetase, family I [Coprococcus catus GD/7] Length = 477 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 92/296 (31%), Gaps = 25/296 (8%) Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKL-----SGARFSVLTGHLAHLERALGQFMIDL 185 RE + E D K + + + + Q +D Sbjct: 1 MAKEKKQVREITSMSEDFAQWYTDVVVKAGLIGYTSVKGCMAIKPAGYAIWENIQHELDK 60 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPK---------FADDMFCTTDGRWLIPTSEVSL 236 G V P+ + + + + + + + PTSE Sbjct: 61 RFKATGVENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGLNELQERMCVRPTSETLF 120 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV--SITREED 294 + Y+ EI + LP + R E ++TR LR +F E T EE Sbjct: 121 CDFYAKEIQSYRDLPKMYNQWCSVVRWE-----KETRPFLRSREFLWQEGHTAHATAEES 175 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 + + A+ + L + + A TY +E + + + Sbjct: 176 KERTEQMLNLYADFCEQVLAMPVIRGQKTEKEKFAGAEATYTIEALM-HDGKALQSGTSH 234 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 G+ +R +Y D +K L++ H S R + AI+ + + +G V P Sbjct: 235 NFGDGFARAFGIQYTDKENK-LQYVHQ--TSWGMTTRLIGAIIMVHGDDNGLVLPP 287 >gi|170726837|ref|YP_001760863.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908] gi|238688661|sp|B1KG61|SYT_SHEWM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169812184|gb|ACA86768.1| threonyl-tRNA synthetase [Shewanella woodyi ATCC 51908] Length = 642 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 98/337 (29%), Gaps = 35/337 (10%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ--IGQAIAEGNLSLVDALKNETSTLKEQL--PIL 87 +D +++ + I+ + R + I + D + T K ++ + Sbjct: 105 DIDLDHKLTQEDIDALEKRMVQLAKTNYIVEKRVGSWQVARDTFEARGETYKMEILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K++ ++ + + + + + + S + + + A Sbjct: 165 SKDDQPALYHHEEYVDMCRGPHVPNMKFCQHFKLMSVAGAYWRGNSDNKMLQRVYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALKVHLNRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELEKFIRQK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 ++ Y EV PL++ +G K+++ MF T + P + +++ Sbjct: 285 LGQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTNSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + E+ E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHVFCTEDQVQQEVSACI 401 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + + VV L T + D ++W Sbjct: 402 KMVYDTYETFGFKDIVVKLSTR----PEKRIGDDDMW 434 >gi|56460507|ref|YP_155788.1| threonyl-tRNA synthetase [Idiomarina loihiensis L2TR] gi|73919798|sp|Q5QYN4|SYT_IDILO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56179517|gb|AAV82239.1| Threonyl-tRNA synthetase [Idiomarina loihiensis L2TR] Length = 638 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 100/352 (28%), Gaps = 47/352 (13%) Query: 40 LIKKIEDIRARRNSNSA-QIGQAIAEGN-LSLVDALKNETSTLKEQLPILEKEEHEV--C 95 + +E I R + + + + + K ++ + Sbjct: 113 TQEDLEKIEKRMKELAKTEYAVVKKKASWKEARETFVERHEPYKIEILDEDIPTDATPGL 172 Query: 96 SSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM---- 151 ++ I + + + + + S + + + A Sbjct: 173 YHHEEYIDMCRGPHVPNMKFCQHFKIMKMAGAYWRGDSDNKMLQRIYGTAWADKKQLKAY 232 Query: 152 --DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS---------------EHGYTE 194 + A K + + E A G + E+ Y E Sbjct: 233 LQRLEEAEKRDHRKIAKAQDLFHWQEEAPGMVFWHHNGWTIFRELETYIREKMREYEYQE 292 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLP 251 V P+++ +G KF++ MF T+ ++ +++ + + LP Sbjct: 293 VKGPMMMDRVLWEKSGHWEKFSELMFTTSSENREYAVKPMNCPGHVQIFNQGLKSYRDLP 352 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 LR R+E A G++R F + + E+ E + E K Sbjct: 353 LRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEQQVQEEVAGCIKMVYETYK 409 Query: 312 RL---DLHYRVVSLCTGDLG------------FSACKTYDLE-VWLAGQNLY 347 ++ ++ + LG A K D++ +L G+ + Sbjct: 410 TFGFENIDVKLSTRPEKRLGDDATWDRSETALAQALKNNDIDFSYLPGEGAF 461 >gi|118497781|ref|YP_898831.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida U112] gi|194323753|ref|ZP_03057529.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|208779844|ref|ZP_03247188.1| threonyl-tRNA synthetase [Francisella novicida FTG] gi|166223342|sp|A0Q762|SYT_FRATN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118423687|gb|ABK90077.1| threonyl-tRNA synthetase [Francisella novicida U112] gi|194322117|gb|EDX19599.1| threonyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|208744299|gb|EDZ90599.1| threonyl-tRNA synthetase [Francisella novicida FTG] Length = 634 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 56/421 (13%), Positives = 124/421 (29%), Gaps = 85/421 (20%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + ++ + + ++ K + K ++ +E + Sbjct: 119 TIEKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQVKIYTQDNFSD 178 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------------REHFEIGEALG 149 + + + L + + S + ++ + E Sbjct: 179 LCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238 Query: 150 LMDFDRATKLSGARFS--------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 D + K+ + + R + +M + +++G +E+ PL+ Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASN-NKYGCSEIRTPLIA 297 Query: 202 RDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +G K+A++MF T + P + + +Y+ ++ + LP+R Sbjct: 298 DFSLWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFG 357 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+E + G+LR F + + E E M+ E+ K + Sbjct: 358 IVHRNEPSGSLH---GLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDF 414 Query: 319 VVSLCTGDLGFSACKTYDLEVW--------------------LAGQNLYR---------- 348 V + + D E W L G+ + Sbjct: 415 AVKIALR----PENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKD 470 Query: 349 EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLN----GSGVAVGRCLIAILEN 399 I CG Q +R+ + Y D N + L+ GS R + ++E+ Sbjct: 471 AIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPV-MLHRAIVGSL---ERFIGMLIEH 526 Query: 400 Y 400 Y Sbjct: 527 Y 527 >gi|307294661|ref|ZP_07574503.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] gi|306879135|gb|EFN10353.1| threonyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] Length = 660 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 67/202 (33%), Gaps = 20/202 (9%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 + D A SV +L + + E GY EV P ++ +G Sbjct: 254 EMDLFHLQQEAHGSVFWHPKGYLIWRELEAYMRRAIDEAGYREVKTPQVMDARQWEQSGH 313 Query: 212 IPKFADDMFCTTD-----------------GRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 K+ ++MF D L P + + ++ I + LPLRF Sbjct: 314 WGKYRENMFVIPDEVPNVEDEGPLVSEAADWMALKPMNCPAHILIFKQGIKSYRDLPLRF 373 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 R+E A G++R QF + + RE+ E + A+ I K Sbjct: 374 YENGCCHRNEPHGALH---GLMRVRQFTQDDAHIFCREDQIVEEVRAFCALADRIYKDFG 430 Query: 315 LHYRVVSLCTGDLGFSACKTYD 336 Y + + F + +D Sbjct: 431 FTYSIKLALRPEKRFGTEEMWD 452 >gi|93353957|gb|ABF08046.1| threonyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 663 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 17/187 (9%) Query: 141 HFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 + + E D R K A V + + + GY Sbjct: 259 YLHMLEEAEKRDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQAGYE 318 Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESK 248 EV P ++ +G + ++MF T + + + +++H + + Sbjct: 319 EVRTPQVMDRSLWERSGHWDNYKENMFVTESEK--RDYAIKPMNCPGHVQIFNHGLRSYR 376 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LPLR R+E A G++R F + + EE E + A Sbjct: 377 DLPLRLAEFGACHRNEPSGALH---GLMRVRGFVQDDAHIFCTEEQIVEEAKAFNELAFS 433 Query: 309 ILKRLDL 315 I Sbjct: 434 IYDDFGF 440 >gi|307249432|ref|ZP_07531421.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858506|gb|EFM90573.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 643 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + D +W Sbjct: 424 PENRIGDDAMW 434 >gi|303253033|ref|ZP_07339186.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247204|ref|ZP_07529254.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648123|gb|EFL78326.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856262|gb|EFM88415.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 643 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + D +W Sbjct: 424 PENRIGDDAMW 434 >gi|332678497|gb|AEE87626.1| Threonyl-tRNA synthetase [Francisella cf. novicida Fx1] Length = 634 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 56/421 (13%), Positives = 124/421 (29%), Gaps = 85/421 (20%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + ++ + + ++ K + K ++ +E + Sbjct: 119 TIEKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQVKIYTQDNFSD 178 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------------REHFEIGEALG 149 + + + L + + S + ++ + E Sbjct: 179 LCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238 Query: 150 LMDFDRATKLSGARFS--------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 D + K+ + + R + +M + +++G +E+ PL+ Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASN-NKYGCSEIRTPLIA 297 Query: 202 RDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +G K+A++MF T + P + + +Y+ ++ + LP+R Sbjct: 298 DFSLWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFG 357 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+E + G+LR F + + E E M+ E+ K + Sbjct: 358 IVHRNEPSGSLH---GLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDF 414 Query: 319 VVSLCTGDLGFSACKTYDLEVW--------------------LAGQNLYR---------- 348 V + + D E W L G+ + Sbjct: 415 AVKIALR----PENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKD 470 Query: 349 EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLN----GSGVAVGRCLIAILEN 399 I CG Q +R+ + Y D N + L+ GS R + ++E+ Sbjct: 471 AIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPV-MLHRAIVGSL---ERFIGMLIEH 526 Query: 400 Y 400 Y Sbjct: 527 Y 527 >gi|254491441|ref|ZP_05104620.1| threonyl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224462919|gb|EEF79189.1| threonyl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 641 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 11/187 (5%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 + + R + ++ D+ ++ Y EV P +V +G KF D +F T Sbjct: 261 GMIFWHDNGWQIYRVVENYIRDV-LRDNDYQEVRTPQVVDRTLWEKSGHWDKFGDMIFST 319 Query: 223 T--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + + + +++ + + LPLR R+E G++R Sbjct: 320 HSENRDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSG---TLHGLMRLR 376 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 F + + E+ +E + E+ + +V L T + EV Sbjct: 377 GFTQDDAHIFCTEDQIQSEVATFIELLHEVYADFGFNEIIVKLSTR----PENRVGSDEV 432 Query: 340 WLAGQNL 346 W + Sbjct: 433 WDKAEKA 439 >gi|238922273|ref|YP_002935787.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|238873945|gb|ACR73653.1| threonyl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 591 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 112/341 (32%), Gaps = 21/341 (6%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 + I +++++ + + K+ + I R S + + + ++ +D + Sbjct: 55 INDDAIEAIEKEMKKICKEGKKI--YRREVSKEEALEMFKDDMYKLDLISGLEDGNITVY 112 Query: 85 PILEKEEHEVCSSLKKLISC--IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHF 142 + + + C V V A+ +++ R G EH Sbjct: 113 DQGDFTDLCRGPHVDNTKLCKNFKLVKYSGVYWKGDASNHVMQRIYGVCFPTAEELEEHL 172 Query: 143 EIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 ++ E D + K L G + + + L ++ D + GY Sbjct: 173 KLLEEAKERDHRKIGKEMELFMSDDLIGRGLPMFLPKGYTVWQELENYIKDKE-RKLGYL 231 Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT----NLYSHEIIESKS 249 V P + +G + ++MF + +Y++++ K Sbjct: 232 HVMTPCVGTVNLYKTSGHWDHYKENMFPAMEVEGESFVLRPMNCPHHMMIYANKMHSYKD 291 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R +A FR EA +G+ R F + + E +E +++ E Sbjct: 292 LPIRIGEIAHDFRFEASG---TLKGIERGRHFCQNDAHLFVTPEQIESEFAKVVDLIFET 348 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 K ++ L D D E+W +N R++ Sbjct: 349 YKDFNITDYRCVLSLRDPEDKVKYHDDDEMWNNAENALRKV 389 >gi|212704422|ref|ZP_03312550.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098] gi|212672143|gb|EEB32626.1| hypothetical protein DESPIG_02477 [Desulfovibrio piger ATCC 29098] Length = 648 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 64/200 (32%), Gaps = 12/200 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + + L F H + Y V P L+R E +G Sbjct: 255 FFTFHEDVAPGMVFWLPKGMMMRTILEDFWRREHIKRN-YDLVQGPQLLRVETWQRSGHY 313 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + +M+ T D + P + +S +Y +++ + LP R+ L R E Sbjct: 314 DHYRQNMYFTQIEDDQYGIKPMNCISHMLIYRNDLRSYRDLPQRYFELGVVHRHEKSG-- 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G+LR QF + + + E E ++ +++ Y+V Sbjct: 372 -TLHGLLRVRQFTQDDAHILCTPEQLEGEILGVIHLIRDLMHLFGFDYKV----GISTRP 426 Query: 330 SACKTYDLEVWLAGQNLYRE 349 D E W N E Sbjct: 427 KDSIGTD-EAWELATNALIE 445 >gi|24373852|ref|NP_717895.1| threonyl-tRNA synthetase [Shewanella oneidensis MR-1] gi|73919825|sp|Q8EER9|SYT_SHEON RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|24348259|gb|AAN55339.1|AE015671_6 threonyl-tRNA synthetase [Shewanella oneidensis MR-1] Length = 642 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 87/312 (27%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D ++++ IE + R + + + ++ A + E + + Sbjct: 105 DIDLEHKLTQDDIEALEKRMLELAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K+ ++ + + + + + S + + + A Sbjct: 165 SKDATPALYHHEEYTDMCRGPHVPNMRFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALSTYLARLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +++ Y EV PL++ +G K+++ MF T + P + +++ Sbjct: 285 LNQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTSSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + E+ E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEDQVQAEVSSCI 401 Query: 304 SCAEEILKRLDL 315 + Sbjct: 402 QMVYDTYSTFGF 413 >gi|254373138|ref|ZP_04988627.1| threonine-tRNA ligase [Francisella tularensis subsp. novicida GA99-3549] gi|151570865|gb|EDN36519.1| threonine-tRNA ligase [Francisella novicida GA99-3549] Length = 634 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 56/421 (13%), Positives = 124/421 (29%), Gaps = 85/421 (20%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + ++ + + ++ K + K ++ +E + Sbjct: 119 TIEKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQVKIYTQDNFSD 178 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------------REHFEIGEALG 149 + + + L + + S + ++ + E Sbjct: 179 LCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238 Query: 150 LMDFDRATKLSGARFS--------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 D + K+ + + R + +M + +++G +E+ PL+ Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASN-NKYGCSEIRTPLIA 297 Query: 202 RDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +G K+A++MF T + P + + +Y+ ++ + LP+R Sbjct: 298 DFSLWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFG 357 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+E + G+LR F + + E E M+ E+ K + Sbjct: 358 IVHRNEPSGSLH---GLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDF 414 Query: 319 VVSLCTGDLGFSACKTYDLEVW--------------------LAGQNLYR---------- 348 V + + D E W L G+ + Sbjct: 415 AVKIALR----PENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKD 470 Query: 349 EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLN----GSGVAVGRCLIAILEN 399 I CG Q +R+ + Y D N + L+ GS R + ++E+ Sbjct: 471 AIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPV-MLHRAIVGSL---ERFIGMLIEH 526 Query: 400 Y 400 Y Sbjct: 527 Y 527 >gi|254487235|ref|ZP_05100440.1| threonyl-tRNA synthetase [Roseobacter sp. GAI101] gi|214044104|gb|EEB84742.1| threonyl-tRNA synthetase [Roseobacter sp. GAI101] Length = 648 Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 71/236 (30%), Gaps = 13/236 (5%) Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + K + +++ E + + D A V Sbjct: 213 DSNRAMLQRIYGVAFTGKEKLRAHLNMLEEAAKRDHRKLGREMDLFHMQEEAPGQVFWHP 272 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGR 226 L Q + GY EV+ P +V + +G K+ D MF R Sbjct: 273 NGWLIYTQLQDYMRRKQRAGGYVEVNTPQVVDRKLWEKSGHWDKYQDHMFIVEVDEEHAR 332 Query: 227 WLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + + +++ + + LPLR R E A G++R F Sbjct: 333 EKSVNALKPMNCPCHVQIFNQGMKSYRDLPLRMAEFGSCNRYEPSGALH---GIMRVRGF 389 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDL-HYRVVSLCTGDLGFSACKTYD 336 + + RE+ E + I K L +++V D + + +D Sbjct: 390 TQDDGHIFCREDQIEEETLIYIEFLSAIYKDLGFENFKVKFSDRPDTRAGSDEVWD 445 >gi|73540970|ref|YP_295490.1| threonyl-tRNA synthetase [Ralstonia eutropha JMP134] gi|123732957|sp|Q472N7|SYT_RALEJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|72118383|gb|AAZ60646.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Ralstonia eutropha JMP134] Length = 635 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 84/289 (29%), Gaps = 51/289 (17%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY EV P ++ +G Sbjct: 250 LDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTAAGYDEVRTPQVMDRSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + +++H + + LPLR R+E Sbjct: 310 QNYKENMFVTESEK--RDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + EE E + A + V L Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFSVYDDFGFKDVAVKLSLR-- 422 Query: 328 GFSACKTYDLEVW--------------------LAGQNLYR----------EISSCSTCG 357 A + EVW L G+ + I CG Sbjct: 423 --PAQRAGSDEVWDHAEEGLRLALRACGVDWEELPGEGAFYGPKVEYHIKDAIGRSWQCG 480 Query: 358 NFQ-----SRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENY 400 Q R+ + Y ++ + L+ + + R L +LEN+ Sbjct: 481 TLQLDLVLPERLGAEYVAEDNSRKRPV-MLHRAILGSFERFLGILLENH 528 >gi|189183871|ref|YP_001937656.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] gi|238692247|sp|B3CSS5|SYT_ORITI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189180642|dbj|BAG40422.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] Length = 648 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 55/184 (29%), Gaps = 21/184 (11%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + + A+ + + I GY EV+ P+++ + +G Sbjct: 249 RELELFHFQDEAQGMPFWHSKGWTIFKIIKDYISCQIQRAGYIEVNTPMVLNQKLWEKSG 308 Query: 211 QIPKFADDMFCTTDG-------------RWLIPTSEVSLTN-----LYSHEIIESKSLPL 252 KF ++MF + + ++++ I + LPL Sbjct: 309 HWEKFRENMFTLDTNAAEQDHNLIKDSIETKCALALKPMNCPGHIQIFNYTIKSYRDLPL 368 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 R R E A G++R F + + E+ E + +++ + Sbjct: 369 RMAEFGSCHRYEPSGALY---GLMRVRSFVQDDAHIFCTEDQITDETIKFCHLLKQVYQD 425 Query: 313 LDLH 316 Sbjct: 426 FGFP 429 >gi|33592589|ref|NP_880233.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|33596580|ref|NP_884223.1| threonyl-tRNA synthetase [Bordetella parapertussis 12822] gi|33601133|ref|NP_888693.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|81425212|sp|Q7VY64|SYT_BORPE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81427196|sp|Q7W912|SYT_BORPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81431262|sp|Q7WKF7|SYT_BORBR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33572235|emb|CAE41786.1| threonyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|33573281|emb|CAE37262.1| threonyl-tRNA synthetase [Bordetella parapertussis] gi|33575568|emb|CAE32646.1| threonyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|332382006|gb|AEE66853.1| threonyl-tRNA synthetase [Bordetella pertussis CS] Length = 649 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 56/168 (33%), Gaps = 6/168 (3%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A + + + ++GY EV AP ++ TG Sbjct: 253 RELDLFHFQDEAPGLIFWHPKGWALWQQVEQYMRKVYQDNGYQEVKAPQILDLTLWKKTG 312 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + ++ +++ + + LPLR+ R+E Sbjct: 313 HWDNYRENMFTTESENRVYGLKPMNCPGHVQIFNAGLHSYRELPLRYGEFGQCHRNEPSG 372 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + GM+R F + + E+ E + +++ K Sbjct: 373 SLH---GMMRVRGFTQDDGHIFCTEDQLQDECAAFTALLQKVYKDFGF 417 >gi|156974364|ref|YP_001445271.1| threonyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|166225516|sp|A7N009|SYT_VIBHB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|156525958|gb|ABU71044.1| hypothetical protein VIBHAR_02079 [Vibrio harveyi ATCC BAA-1116] Length = 642 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 96/344 (27%), Gaps = 37/344 (10%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PI 86 + LDE +E I R + + + + D ++ K ++ Sbjct: 107 IDLDESL--TQDDLEKIEKRMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDEN 164 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE------ 140 + +++ ++ I + + + + + S + + Sbjct: 165 VSRDDRPGLYHHEEYIDMCRGPHVPNMGFCQHFTLMNVAGAYWRGNSDNKMLQRIYGTAF 224 Query: 141 --------HFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------L 185 H E D + K + D Sbjct: 225 HDKKALKAHLTRLEEAAKRDHRKLGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRS 284 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSH 242 E+GY EV PL++ +G K+AD MF T L P + +++ Sbjct: 285 KLDEYGYQEVKGPLIMDRVLWERSGHWDKYADAMFTTSSENREYALKPMNCPGHVQIFNQ 344 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LPLR R+E A G++R F + + E E Sbjct: 345 GLKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTNC 401 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + + VV L T + E+W + Sbjct: 402 IKMVYDTYQTFGFDNIVVKLSTR----PEKRVGSDEIWDQSEEA 441 >gi|237653686|ref|YP_002890000.1| threonyl-tRNA synthetase [Thauera sp. MZ1T] gi|237624933|gb|ACR01623.1| threonyl-tRNA synthetase [Thauera sp. MZ1T] Length = 638 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + EHGY EV P +V +G Sbjct: 250 LDLFHIQDEAPGMVFWHAKGWTLWQQVEQYLRRTIGEHGYQEVKTPQIVDRSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 ++D MF T + + + +++ + + LPLR R+E + Sbjct: 310 GMYSDLMFTTQSEKRDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + +++ + Sbjct: 370 H---GIMRVRNFVQDDAHIFCAESQVQAESAEFIRLLQQVYQDFGF 412 >gi|115315107|ref|YP_763830.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|122324891|sp|Q0BL41|SYT_FRATO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|115130006|gb|ABI83193.1| threonine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] Length = 634 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 98/327 (29%), Gaps = 42/327 (12%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + ++ + + ++ K + K ++ +E + Sbjct: 119 TIEKKMKELAKKSAPVSYRVVPKTEAIEFFKAQGENYKVEIIDSIADEQMKIYTQDNFSD 178 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------------REHFEIGEALG 149 + + + L + + S + ++ + E Sbjct: 179 LCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238 Query: 150 LMDFDRATKLSGARFS--------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 D + K+ + + R + +M + +++G +E+ PL+ Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASN-NKYGCSEIRTPLIA 297 Query: 202 RDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +G K+A++MF T + P + + +Y+ ++ + LP+R Sbjct: 298 DFSLWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFG 357 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+E + G+LR F + + E E M+ E+ K + Sbjct: 358 IVHRNEPSGSLH---GLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDF 414 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQN 345 V + + D E W + Sbjct: 415 AVKIALR----PENRIGDDETWDKSEQ 437 >gi|283769478|ref|ZP_06342374.1| threonine--tRNA ligase [Bulleidia extructa W1219] gi|283103746|gb|EFC05132.1| threonine--tRNA ligase [Bulleidia extructa W1219] Length = 584 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 83/254 (32%), Gaps = 17/254 (6%) Query: 110 LEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK---------LS 160 N +L R G + ++ E D + K Sbjct: 140 HSGAYWKGDKNNKVLQRIYGVCFPTDTELEAYLQVLEEAKERDHRKLGKDLKMFLFSETV 199 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G+ + + + R L ++++ + GY V P + + +G + + +DMF Sbjct: 200 GSGLPMWLPNGFTVRRLLSDYIMEKEIAL-GYEHVLTPSVASTKLYEVSGHLAHYQEDMF 258 Query: 221 CTTDG----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + L P + +Y + + LP+R +A FR EA A G+ Sbjct: 259 PIMERDGDSYVLRPMNCPEHMIIYKASLHSYRDLPVRIAEIAHDFRFEASGALT---GIE 315 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R F + + R + E + + ++ L DL + + Sbjct: 316 RSRSFTQNDSHIFLRPDQIAEEIKNVTKLILDVYNDFGFKDYSFRLSLRDLNNTDKYFGN 375 Query: 337 LEVWLAGQNLYREI 350 ++W +N RE+ Sbjct: 376 DDLWTRSENELREV 389 >gi|317471544|ref|ZP_07930893.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|316900979|gb|EFV22944.1| threonyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 539 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 99/319 (31%), Gaps = 34/319 (10%) Query: 40 LIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSS 97 +E I A + Q + + +K + K +L E+ + Sbjct: 8 TQDDLEKIEAEMKKIVKEGLQITCFTKPREEAIAFMKEQNEPYKVELIEDLPEDSVISFY 67 Query: 98 LKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHF 142 + + P + +L R G + +++ Sbjct: 68 QQGEFIDLCAGPHLMTTKPVKAFKLTSLAGAYWRGNEKNQMLTRIYGTAFAKKAELKDYL 127 Query: 143 EIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 + E D + K G F + L+ L + ++H ++ GY E Sbjct: 128 TMMEEAKKRDHRKLGKELGLFMMRDEGPGFPFFLPNGMVLKNTLLDYWREIH-NKAGYVE 186 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLP 251 +S+P+++ +G + ++M+ T + + P + +Y E + LP Sbjct: 187 ISSPIMLSRHLWETSGHWDHYQENMYTTVIDEEDFAIKPMNCPGGVLVYQSEPRSYRDLP 246 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 LR L R E G++R F + + E E + + + +++ Sbjct: 247 LRMGELGLVHRHEKSG---QLHGLMRVRCFTQDDAHIFMMPEQIKDEIKGVAALIDQVYS 303 Query: 312 --RLDLHYRVVSLCTGDLG 328 H + + +G Sbjct: 304 LFGFKYHVELSTRPEDSMG 322 >gi|77360339|ref|YP_339914.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] gi|76875250|emb|CAI86471.1| threonyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 636 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+ Y EV P+++ +G K+AD MF Sbjct: 259 EAPGMVFWHNDGWSIYRELEDFVREKLREYDYEEVKGPMMMDRSLWEKSGHWEKYADAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LPLR R+E A G++R Sbjct: 319 TTVSEKREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALH---GLMR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + EE E + + + Sbjct: 376 VRGFTQDDAHIFCTEEQIMDEVSACIKMVYDTYETFGF 413 >gi|308067332|ref|YP_003868937.1| Threonyl-tRNA synthetase 2 (threonine--tRNA ligase) (ThrRS) [Paenibacillus polymyxa E681] gi|305856611|gb|ADM68399.1| Threonyl-tRNA synthetase 2 (Threonine--tRNA ligase) (ThrRS) [Paenibacillus polymyxa E681] Length = 637 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 95/321 (29%), Gaps = 26/321 (8%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 + + ++++ + + E++ R S + I G L L L E+ Sbjct: 114 PLSVDDLAKIEKEMTKIAQ--ENLPITRRVVSREEATRIF-GELEDPLKL-ELIRDLPEE 169 Query: 84 LPILEKEEHEVCSSLKKLISC-------IPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 I ++ E + + + +N +L R G Sbjct: 170 AEITIYDQGEFFDLCRGPHLPSTGRIKAFKLLSVAGAYWRGDSNNKMLQRIYGTAFPKKA 229 Query: 137 LSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTS 188 EH + E D + K + AL + D+ Sbjct: 230 QLDEHLHLLEEAKKRDHRKLGKELELFMFSEEAPGMPFYLPKGMVVRTALEDYSRDIQ-R 288 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEII 245 HGY EV PL++ + +G + ++M+ + ++ ++ +E+ Sbjct: 289 LHGYEEVRTPLMMNNRLWEQSGHYEHYKENMYFSEVDETTFALKPMNCPGHMLVFKNELH 348 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LP+R R E A GM+R F + + E ++ Sbjct: 349 SYRDLPIRIAEFGQVHRHELSGAL---NGMMRVRTFCQDDAHIFVTPGQIEQEITDVIKL 405 Query: 306 AEEILKRLDLHYRVVSLCTGD 326 E+ + V D Sbjct: 406 INEMYSVFGFDFTVELSTRPD 426 >gi|261493242|ref|ZP_05989769.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496515|ref|ZP_05992895.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307718|gb|EEY09041.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311092|gb|EEY12268.1| threonine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 643 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE +E + +I Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIESEVTSCIKMVYDIYSTFGF 413 >gi|326404590|ref|YP_004284672.1| threonyl-tRNA synthetase [Acidiphilium multivorum AIU301] gi|325051452|dbj|BAJ81790.1| threonyl-tRNA synthetase [Acidiphilium multivorum AIU301] Length = 640 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 48/169 (28%), Gaps = 8/169 (4%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A SV + + E GY EV P L+ + +G Sbjct: 251 MDLFHMQEEAVGSVFWHEKGWRLYRTVEAYMRRRQEEFGYIEVRTPQLLDRKLWEASGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + MF + + +++H + + LPLR R E Sbjct: 311 DNYRSHMFIAEVEDEDKVLAVKPMNCPCHVQIFNHGLRSYRELPLRMAEFGACHRYEPSG 370 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 A G++R F + + E+ E R + + Sbjct: 371 ALH---GIMRVRAFAQDDAHIFCTEDQIADETVRFVEMLRRVYADFGFP 416 >gi|145219006|ref|YP_001129715.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265] gi|189083618|sp|A4SCK4|SYT_PROVI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145205170|gb|ABP36213.1| Ser-tRNA(Thr) hydrolase [Chlorobium phaeovibrioides DSM 265] Length = 666 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 55/189 (29%), Gaps = 22/189 (11%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV----SLTNLYSH-- 242 GY V P + + +G P ++D F +E + + H Sbjct: 298 RRGYLPVYTPHIGNIDLYKRSGHYPYYSDSQFPPLTYHDEEGKAEQYLLKPMNCPHHHLI 357 Query: 243 ---EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ + LP+R +R E + G++R F + + R + E Sbjct: 358 YSSKMRSYRDLPVRLAEFGTVYRHEQSG---ELNGLVRARGFTQDDSHIYCRPDQLVDEI 414 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + + L L D + +VW + RE Sbjct: 415 CNAIDLTRYVFATLGFTEVETRLSMHDPLNPSKYGGTADVWEQAEKDVREA--------- 465 Query: 360 QSRRMNSRY 368 + RM Y Sbjct: 466 -ADRMKINY 473 >gi|269102906|ref|ZP_06155603.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268162804|gb|EEZ41300.1| threonyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 643 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 9/166 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + G F G E + + +++ Y EV PL++ +G Sbjct: 255 FHMQQEAPGMVFWHHNGWTIFRE---LEVFVREKLNQYDYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + + K Sbjct: 372 H---GIMRVRGFTQDDAHIFCTESQVQQEVTSCIEMVYDTYKTFGF 414 >gi|254362299|ref|ZP_04978411.1| threonine--tRNA ligase [Mannheimia haemolytica PHL213] gi|153093879|gb|EDN74807.1| threonine--tRNA ligase [Mannheimia haemolytica PHL213] Length = 643 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE +E + +I Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIESEVISCIKMVYDIYSTFGF 413 >gi|167746735|ref|ZP_02418862.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662] gi|167653695|gb|EDR97824.1| hypothetical protein ANACAC_01447 [Anaerostipes caccae DSM 14662] Length = 644 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 98/319 (30%), Gaps = 34/319 (10%) Query: 40 LIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSS 97 +E I A + Q + + +K K +L E+ + Sbjct: 112 TQDDLEKIEAEMKKIVKEGLQITCFTKPREEAIAFMKERNEPYKVELIEDLPEDSVISFY 171 Query: 98 LKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHF 142 + + P + +L R G + +++ Sbjct: 172 QQGEFIDLCAGPHLMTTKPVKAFKLTSLAGAYWRGNEKNQMLTRIYGTAFAKKAELKDYL 231 Query: 143 EIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 + E D + K G F + L+ L + ++H ++ GY E Sbjct: 232 TMMEEAKKRDHRKLGKELGLFMMRDEGPGFPFFLPNGMVLKNTLLDYWREIH-NKAGYVE 290 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLP 251 +S+P+++ +G + ++M+ T + + P + +Y E + LP Sbjct: 291 ISSPIMLSRHLWETSGHWDHYQENMYTTVIDEEDFAIKPMNCPGGVLVYQSEPRSYRDLP 350 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 LR L R E G++R F + + E E + + + +++ Sbjct: 351 LRMGELGLVHRHEKSG---QLHGLMRVRCFTQDDAHIFMMPEQIKDEIKGVAALIDQVYS 407 Query: 312 --RLDLHYRVVSLCTGDLG 328 H + + +G Sbjct: 408 LFGFKYHVELSTRPEDSMG 426 >gi|323698513|ref|ZP_08110425.1| threonyl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323458445|gb|EGB14310.1| threonyl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 645 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 56/153 (36%), Gaps = 6/153 (3%) Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW 227 L RA+ + + GY V P++++ E +G + ++M+ T Sbjct: 265 WHPRGMLLRAILEDFERKEHLKRGYDLVQGPIILKRELWEKSGHYDNYRENMYFTEIDEQ 324 Query: 228 LIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 ++ +Y +I+ + LP R+ L R E G++R F + Sbjct: 325 AYGIKPMNCLAHMIIYKRKIMSYRDLPQRYFELGVVHRHEKSGVLH---GLMRVRTFTQD 381 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 + I R + E ++ ++I + + Sbjct: 382 DAHLICRPDQVEEEILNLIKFYKDIYALFNYEF 414 >gi|50306435|ref|XP_453191.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642325|emb|CAH00287.1| KLLA0D02772p [Kluyveromyces lactis] Length = 461 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 63/190 (33%), Gaps = 12/190 (6%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + + L FM +++G+ EV PL+ R +G + DDM Sbjct: 57 ISPGSIFFLPNGTKIFNKLVSFMKLQQQNKYGFQEVVTPLIYRKTLWEQSGHWENYKDDM 116 Query: 220 FCT------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 F + L P + ++ LPLRF+ +P R+EA A Sbjct: 117 FRVEGNDVSKEEYGLKPMNCPGHCVVFKRFDRSYNELPLRFSDFSPLHRNEASGALS--- 173 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF---S 330 G+ R +F + + + E ++ L + ++ L Sbjct: 174 GLTRVRKFHQDDGHIFCTPDQVRQEIQKCLELVDMCYTKVFPISGDSKQAAYSLTLSTRP 233 Query: 331 ACKTYDLEVW 340 D+EVW Sbjct: 234 EKYVGDIEVW 243 >gi|158321007|ref|YP_001513514.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|158141206|gb|ABW19518.1| threonyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 636 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 90/313 (28%), Gaps = 41/313 (13%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 ++ + + E ++ K + K +L E+ + + + Sbjct: 121 KIEKEMEKIVKEDLALEKFVLPRNEAIEFAKKQGEDYKVELIQDLPEDEVISFYRQGEFT 180 Query: 104 CIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 + P S +L R G + EH E Sbjct: 181 DLCAGPHVPSTGKVKAIKLLSIAGAYWRGSEKNKMLQRIYGTSFTKKSDLEEHLNRLEEA 240 Query: 149 GLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 D + K F L AL F + H + GY E+ P++ Sbjct: 241 KKRDHRKLGKELDLFSLQEEGPGFPFFHPRGMVLRNALENFWREEHV-KRGYDEIKTPII 299 Query: 201 VRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTL 257 + ++ +G + ++M+ T + P + +Y+ + + P+R L Sbjct: 300 LNEKLWRQSGHWDHYQENMYFTKIDDGDYAIKPMNCPGSILMYNRKKHSYRDFPIRMGEL 359 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK--RLDL 315 R E A G++R F + + E E ++ + + Sbjct: 360 GIVHRHELSGALH---GLMRVRNFTQDDAHLFVLPEQIKEEIIGIIDFVDYVYNIFGFKY 416 Query: 316 HYRVVSLCTGDLG 328 H + + +G Sbjct: 417 HIELSTRPENSMG 429 >gi|153827549|ref|ZP_01980216.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|153829051|ref|ZP_01981718.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39] gi|229514759|ref|ZP_04404220.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21] gi|229522960|ref|ZP_04412374.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|229526102|ref|ZP_04415506.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229527753|ref|ZP_04417144.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|254284959|ref|ZP_04959925.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|148875480|gb|EDL73615.1| threonyl-tRNA synthetase [Vibrio cholerae 623-39] gi|149738482|gb|EDM52878.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|150424962|gb|EDN16739.1| threonyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|229334115|gb|EEN99600.1| threonyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|229336260|gb|EEO01278.1| threonyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229340177|gb|EEO05185.1| threonyl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|229348739|gb|EEO13697.1| threonyl-tRNA synthetase [Vibrio cholerae TMA 21] gi|327485485|gb|AEA79891.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4] gi|327485490|gb|AEA79896.1| Threonyl-tRNA synthetase [Vibrio cholerae LMA3894-4] Length = 642 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 252 LDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 424 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 425 PEKRVGSDEIWDKSEQA 441 >gi|91793061|ref|YP_562712.1| threonyl-tRNA synthetase [Shewanella denitrificans OS217] gi|123060978|sp|Q12NI7|SYT_SHEDO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|91715063|gb|ABE54989.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella denitrificans OS217] Length = 642 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 36/289 (12%), Positives = 79/289 (27%), Gaps = 31/289 (10%) Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 E + + K+ ++ + + + + + + S Sbjct: 153 EVYKIAILDENISKDATPALYHHEEYTDMCRGPHVPNMRFCQNFKLMSVAGAYWRGNSDN 212 Query: 136 HLSREHFEIGEALGL---------------------MDFDRATKLSGARFSVLTGHLAHL 174 + + + A D A V + Sbjct: 213 KMLQRVYGTAWADKKALKTHLTRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWS 272 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPT 231 + I ++ Y EV PL++ +G K++D MF T + P Sbjct: 273 LFLELEKFIRQKLGQYTYQEVKGPLMMDRALWERSGHWDKYSDAMFTTNSENREYAIKPM 332 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 + +++ + + LPLR R+E + G++R F + + Sbjct: 333 NCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCT 389 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 ++ E + + VV L T + D ++W Sbjct: 390 DDQVQKEVSDCIQMVYDTYATFGFENIVVKLSTR----PEKRIGDDDMW 434 >gi|85375301|ref|YP_459363.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] gi|123293655|sp|Q2N6X5|SYT_ERYLH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|84788384|gb|ABC64566.1| threonyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] Length = 672 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 99/344 (28%), Gaps = 38/344 (11%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN--ETSTLKEQLP 85 + + +++EK R +IK + + S I + AEG + + K E L Sbjct: 122 DDLPAIEEKMREIIKADKPLVREVWSREQLIEKWEAEGEVFKAEWAKELPEDEELTVYWS 181 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL----------------IRSVG 129 E + + + Sbjct: 182 GEPGGEDSWLDMCRGPHLASTGKLDPQAFKLMRVAGAYWRGDQRNPQLTRIYGTGWLNKK 241 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 + + +H E + + D A SV + + + Sbjct: 242 QLNAHLHRLEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPQGYKIWRELEAYMRRKMDG 301 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------------GRWLIPTS 232 GY E+ P ++ +G K+ ++MF D L P + Sbjct: 302 AGYREIKTPQVMDARQWEQSGHWGKYRENMFVIPDEIPNTEDEGELVSKDADWMALKPMN 361 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + ++ I + LP+R + R+E A G++R QF + + E Sbjct: 362 CPAHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALH---GLMRVRQFTQDDAHIFCTE 418 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 + E A+E+ + Y V + F + + +D Sbjct: 419 DQVVEEVRAFCKLADEVYRDFGFDYDVKLALRPEQRFGSEEDWD 462 >gi|15601053|ref|NP_232683.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar eltor str. N16961] gi|153817556|ref|ZP_01970223.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|227811910|ref|YP_002811920.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2] gi|229506559|ref|ZP_04396068.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229510645|ref|ZP_04400125.1| threonyl-tRNA synthetase [Vibrio cholerae B33] gi|229517224|ref|ZP_04406669.1| threonyl-tRNA synthetase [Vibrio cholerae RC9] gi|229606038|ref|YP_002876742.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254850514|ref|ZP_05239864.1| threonyl-tRNA synthetase [Vibrio cholerae MO10] gi|255745914|ref|ZP_05419861.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262163529|ref|ZP_06031275.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|298500133|ref|ZP_07009939.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757] gi|22654144|sp|Q9KMN7|SYT_VIBCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783545|sp|C3LUV8|SYT_VIBCM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|9657684|gb|AAF96196.1| threonyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126511981|gb|EAZ74575.1| threonyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|227011052|gb|ACP07263.1| threonyl-tRNA synthetase [Vibrio cholerae M66-2] gi|229345260|gb|EEO10233.1| threonyl-tRNA synthetase [Vibrio cholerae RC9] gi|229353090|gb|EEO18030.1| threonyl-tRNA synthetase [Vibrio cholerae B33] gi|229356910|gb|EEO21828.1| threonyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229372524|gb|ACQ62946.1| threonyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254846219|gb|EET24633.1| threonyl-tRNA synthetase [Vibrio cholerae MO10] gi|255735668|gb|EET91066.1| threonyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262028096|gb|EEY46755.1| threonyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|297542114|gb|EFH78165.1| threonyl-tRNA synthetase [Vibrio cholerae MAK 757] Length = 642 Score = 54.0 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 252 LDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 424 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 425 PEKRVGSDEIWDKSEQA 441 >gi|281357061|ref|ZP_06243551.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] gi|281316619|gb|EFB00643.1| threonyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] Length = 591 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 59/177 (33%), Gaps = 8/177 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D + G + A + F + H ++GY + P + + +G Sbjct: 204 DLFSFSDNVGPGLVLWHPKGAFIRHTFETFWKEEH-YKNGYELLYTPHIGQSVLWETSGH 262 Query: 212 IPKFADDMFCTTD----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + + D M+ ++ P + +Y + + LPLR+ L +R E Sbjct: 263 LSFYKDGMYSPMQIDEKDYYVKPMNCPFHIEVYQSRLRSYRELPLRWAELGTVYRYEKSG 322 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 A G+LR F + + I E E +L + I K L T Sbjct: 323 ALH---GLLRVRGFTQDDSHIICTPEQIEDEIAEVLRFSLYIWKSFGFTEIKPYLST 376 >gi|121591402|ref|ZP_01678683.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121546739|gb|EAX56913.1| threonyl-tRNA synthetase [Vibrio cholerae 2740-80] Length = 642 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 252 LDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 424 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 425 PEKRVGSDEIWDKSEQA 441 >gi|262403446|ref|ZP_06080004.1| threonyl-tRNA synthetase [Vibrio sp. RC586] gi|262349950|gb|EEY99085.1| threonyl-tRNA synthetase [Vibrio sp. RC586] Length = 642 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 252 LDLFHMQQEAPGMVFWHHNGWSVFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 424 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 425 PEKRVGSDEIWDKSEQA 441 >gi|262164341|ref|ZP_06032079.1| threonyl-tRNA synthetase [Vibrio mimicus VM223] gi|262026721|gb|EEY45388.1| threonyl-tRNA synthetase [Vibrio mimicus VM223] Length = 642 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 252 LDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 424 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 425 PEKRVGSDEIWDKSEQA 441 >gi|258625495|ref|ZP_05720387.1| threonyl-tRNA synthetase [Vibrio mimicus VM603] gi|258582201|gb|EEW07058.1| threonyl-tRNA synthetase [Vibrio mimicus VM603] Length = 642 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 252 LDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 424 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 425 PEKRVGSDEIWDKSEQA 441 >gi|254419068|ref|ZP_05032792.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3] gi|196185245|gb|EDX80221.1| threonyl-tRNA synthetase [Brevundimonas sp. BAL3] Length = 642 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 7/167 (4%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 + R V + + + + GY EV P ++ + +G Sbjct: 251 MELFHMQEEGRGMVFWHPKGWILWRVLEAYMRRRLDAAGYVEVKTPQVLDRKFWEQSGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTN----LYSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 K+ +MF + + ++ + LPLR R E + Sbjct: 311 DKYRPNMFVCETVEGETLSLKPMNCPGHVQIFDQGQRSYRELPLRMAEFGACHRYEPSGS 370 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + RE+ E + A + L + Sbjct: 371 LH---GLMRVRGFTQDDAHIFCREDQIVEETAEFIKLARSVHADLGM 414 >gi|261212792|ref|ZP_05927076.1| threonyl-tRNA synthetase [Vibrio sp. RC341] gi|260837857|gb|EEX64534.1| threonyl-tRNA synthetase [Vibrio sp. RC341] Length = 642 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 252 LDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 424 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 425 PEKRVGSDEIWDKSEQA 441 >gi|239831910|ref|ZP_04680239.1| threonyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] gi|239824177|gb|EEQ95745.1| threonyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] Length = 674 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETS 78 R+ + + +++K R +I++ + + Q+ E + Sbjct: 127 RNEPFTPDDLPVIEKKMREIIQRNKPFTKEIWSREKAKQVFADKGENYKVELVDAIPAGQ 186 Query: 79 TLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LK Q + +S ++ + + + AN +L R G + + Sbjct: 187 DLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDN 246 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL-------HTSE 189 + + + E D R + G A G M Sbjct: 247 DLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDS 306 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLY 240 HGY EV+AP ++ +G + D+MF L P + ++ Sbjct: 307 HGYQEVNAPQVLDKSLWETSGHWGWYRDNMFKVTVAGDETDDDRVFALKPMNCPGHVQIF 366 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 H + + LP++ R E A G++R F + + EE E Sbjct: 367 KHGLKSYRDLPIKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAAECL 423 Query: 301 RMLSCAEEILKRLDL 315 R+ + K Sbjct: 424 RINDLILSVYKDFGF 438 >gi|85858497|ref|YP_460699.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|85721588|gb|ABC76531.1| threonyl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 645 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 89/293 (30%), Gaps = 20/293 (6%) Query: 51 RNSNSAQIGQAIAEGNLS--LVDALKNETSTLKE----QLPILEKEEHEVCSSLKKLISC 104 R S + A +G V+ L + +K + +I Sbjct: 145 REEVSREEAVAFFQGKGESYKVELLNDLPGNIKTVSLYRQGHYTDLCRGPHVPSTSMIRA 204 Query: 105 IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK------ 158 + + +L R G ++ E+ +I E D + K Sbjct: 205 FKLLNVAGAYWRGDERNKMLQRIYGTGFASREELDEYLKILEEAKKRDHRKLGKDLDLFQ 264 Query: 159 --LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 ++ + R + + GY V P +++ + +G + Sbjct: 265 VSEEAGAGLIIFHPKGTILRTIIEDWEKKEHLRRGYDMVMGPQILKVDLWKKSGHFDHYR 324 Query: 217 DDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 ++M+ T + P + +S +Y +I + LP+R+ L R E Sbjct: 325 ENMYFTEVEGQSYGIKPMNCLSHMLIYKTKIRSYRDLPIRYFELGTVHRHEKTGVLH--- 381 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 G+LR QF + + + E +E + +K Y V D Sbjct: 382 GLLRARQFTQDDAHILCTPEQLNSEIRAIADFVGYAMKIFGFEYEVELSTRPD 434 >gi|89073900|ref|ZP_01160406.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34] gi|89050228|gb|EAR55732.1| threonyl-tRNA synthetase [Photobacterium sp. SKA34] Length = 631 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 55/166 (33%), Gaps = 9/166 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + G F G E + I +E+ Y EV PL++ +G Sbjct: 255 FHMQQEAPGMVFWHHNGWTIFRE---LEVFIREKLNEYDYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + + K Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMVYDTYKTFGF 414 >gi|297579610|ref|ZP_06941537.1| threonyl-tRNA synthetase [Vibrio cholerae RC385] gi|297535256|gb|EFH74090.1| threonyl-tRNA synthetase [Vibrio cholerae RC385] Length = 642 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 252 LDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 424 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 425 PEKRVGSDEIWDKSEQA 441 >gi|258623264|ref|ZP_05718271.1| threonyl-tRNA synthetase [Vibrio mimicus VM573] gi|262173542|ref|ZP_06041219.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451] gi|258584450|gb|EEW09192.1| threonyl-tRNA synthetase [Vibrio mimicus VM573] gi|261890900|gb|EEY36887.1| threonyl-tRNA synthetase [Vibrio mimicus MB-451] Length = 642 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 252 LDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 424 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 425 PEKRVGSDEIWDKSEQA 441 >gi|148261186|ref|YP_001235313.1| threonyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|166223313|sp|A5G0L2|SYT_ACICJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146402867|gb|ABQ31394.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Acidiphilium cryptum JF-5] Length = 640 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 48/169 (28%), Gaps = 8/169 (4%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A SV + + E GY EV P L+ + +G Sbjct: 251 MDLFHMQEEAVGSVFWHEKGWRLYRTVEAYMRRRQEEFGYIEVRTPQLLDRKLWEASGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + MF + + +++H + + LPLR R E Sbjct: 311 DNYRSHMFIAEVEDEDKVLAVKPMNCPCHVQIFNHGLRSYRELPLRMAEFGACHRYEPSG 370 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 A G++R F + + E+ E R + + Sbjct: 371 ALH---GIMRVRAFAQDDAHIFCTEDQIADETVRFVEMLRRVYADFGFP 416 >gi|295696884|ref|YP_003590122.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295412486|gb|ADG06978.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 641 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 9/164 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 G F + G + E + + +E+ Y EV P+L+ +G + ++M Sbjct: 266 PGMPFLLPKGMVIRNE---LERFMREFLNEYDYEEVKTPILMDRVLWERSGHWDHYKENM 322 Query: 220 FCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + T ++ + H + + LP+R R E A G+L Sbjct: 323 YFTEVDEREFALKPMNCPGHALTFKHRVRSYRDLPIRMAEFGLLHRHELSGALH---GLL 379 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 R +F + + R + E + + + YRV Sbjct: 380 RVREFTQDDAHLFVRPDQIQDEVFACMDLIDRVYAAFGFPYRVE 423 >gi|124023562|ref|YP_001017869.1| threonyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] gi|166225478|sp|A2CAU4|SYT_PROM3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123963848|gb|ABM78604.1| Threonyl-tRNA synthatase [Prochlorococcus marinus str. MIT 9303] Length = 640 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 10/189 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A + + + I S H Y E+ P +V +G KF DDMF Sbjct: 258 EAPGMIFWHAKGWAIYQVLEQYIRETLSLHAYQEIRTPQVVDRSLWEKSGHWEKFKDDMF 317 Query: 221 CTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 TT + + I +++ + + LP+R R+E + G++R Sbjct: 318 TTTSENREYAIKPMNCPCHVQIFNQGLKSYRDLPIRLAEFGSCLRNEPSGSLH---GLMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E E + + EI + ++ L T + Sbjct: 375 VRNFVQDDAHIFCTELQVQEEVSKFIDLVFEIYRSFGFDSVLIKLSTR----PEKRVGSD 430 Query: 338 EVWLAGQNL 346 E+W + Sbjct: 431 EIWDKSEKA 439 >gi|170721151|ref|YP_001748839.1| threonyl-tRNA synthetase [Pseudomonas putida W619] gi|229558042|sp|B1J6U4|SYT_PSEPW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169759154|gb|ACA72470.1| threonyl-tRNA synthetase [Pseudomonas putida W619] Length = 640 Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+GY+E+ P +V +G Sbjct: 250 LDLFHLQEEAPGMVFWHANGWTVYQVLEQYMRQVQRENGYSEIKTPQVVDRILWERSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T+ + + +++ + + LPLR R+E A Sbjct: 310 SNYAENMFTTSSESRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + ++ K + L T Sbjct: 370 H---GIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDFGFTDVAMKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 A + E+W + Sbjct: 423 PAKRVGSEELWDRAEGA 439 >gi|257064333|ref|YP_003144005.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia heliotrinireducens DSM 20476] gi|256791986|gb|ACV22656.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Slackia heliotrinireducens DSM 20476] Length = 586 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 64/192 (33%), Gaps = 12/192 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G F + L+ AL ++ D+ ++ Y EV P ++ + +G + ++M+ Sbjct: 211 GPGFPFWLPNGTKLKNALIEYWHDMMA-KYNYDEVETPQILSRKLWETSGHWDHYKENMY 269 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + P + +Y + LPL+ R E A G+ R Sbjct: 270 TTVIDEEDYAVKPMNCPGACLIYKSRPRSYRDLPLKLAEAGLDHRHELKGALH---GLFR 326 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E +E ++ Y+V + D Sbjct: 327 VRAFTQDDGHIYVTPEQISDIVLETARLFDEYYQQFGFEYKVELSTRPE----DSMGSD- 381 Query: 338 EVWLAGQNLYRE 349 E W +N RE Sbjct: 382 EDWERAENGLRE 393 >gi|310640050|ref|YP_003944808.1| ser-tRNA(thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus polymyxa SC2] gi|309245000|gb|ADO54567.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Paenibacillus polymyxa SC2] Length = 637 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 96/321 (29%), Gaps = 26/321 (8%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 + + ++++ + + E++ R S + I G + L L E+ Sbjct: 114 PLSVDDLAKIEKEMAKITQ--ENLPITRRVVSREEATRIF-GEMEDPLKL-ELIRDLPEE 169 Query: 84 LPILEKEEHEVCSSLKKLISC-------IPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 I ++ E + + + +N +L R G Sbjct: 170 AEITIYDQGEFFDLCRGPHLPSTGRIKAFKLLSVAGAYWRGDSNNKMLQRIYGTAFPKKA 229 Query: 137 LSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTS 188 EH + E D + K + AL + D+ Sbjct: 230 QLDEHLHLLEEAKKRDHRKLGKELELFMFSEEAPGMPFYLPKGMVVRTALEDYSRDIQ-R 288 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEII 245 HGY EV PL++ + +G + ++M+ + ++ ++ +E+ Sbjct: 289 LHGYEEVRTPLMMNNRLWEQSGHYEHYKENMYFSEVDETTFALKPMNCPGHMLVFKNELH 348 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LP+R + R E A GM+R F + + E ++ Sbjct: 349 SYRDLPIRISEFGQVHRHELSGAL---NGMMRVRTFCQDDAHIFVTPGQIEKEITDVIKL 405 Query: 306 AEEILKRLDLHYRVVSLCTGD 326 E+ + V D Sbjct: 406 INEMYSVFGFDFTVELSTRPD 426 >gi|296135845|ref|YP_003643087.1| threonyl-tRNA synthetase [Thiomonas intermedia K12] gi|295795967|gb|ADG30757.1| threonyl-tRNA synthetase [Thiomonas intermedia K12] Length = 639 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 6/168 (3%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A + + + GY EV P ++ +G Sbjct: 248 KELDLFHFQEEAPGLAFWHPKGWALWQAVEQYMRQVYRDSGYQEVKGPQILDVSLWKRSG 307 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 ++++MF T + ++ +++ + + LP+R+ R+E Sbjct: 308 HWDNYSENMFFTESEKRQFAVKPMNCPGHIQIFNSGLRSYRDLPIRYGEFGSCHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G+LR F + + E+ E A ++ Sbjct: 368 ALH---GLLRVRGFTQDDGHIFCTEDQIEAEVTAFHQQAMQVYTDFGF 412 >gi|90021224|ref|YP_527051.1| threonyl-tRNA synthetase [Saccharophagus degradans 2-40] gi|123090560|sp|Q21KE0|SYT_SACD2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|89950824|gb|ABD80839.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Saccharophagus degradans 2-40] Length = 636 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 59/197 (29%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 FD A V + + +GY E+ P +V +G Sbjct: 250 FDLFHIQEEAPGMVFWHPNGWSIYTAIEEYMREVQRLNGYEEIKTPQVVDRSLWERSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF D+MF + + +++ + + LPLR R+EA Sbjct: 310 DKFRDNMFTVESESRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGCCHRNEASG-- 367 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 +G++R F + + E E ++ K ++ L T Sbjct: 368 -TLQGLMRVRGFVQDDAHIFCSESMIQDEVSVFTDLLFKVYKDFGFEDVIIRLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 + EVW + Sbjct: 423 PEQRVGSDEVWDKAEKA 439 >gi|90579635|ref|ZP_01235444.1| threonyl-tRNA synthetase [Vibrio angustum S14] gi|90439209|gb|EAS64391.1| threonyl-tRNA synthetase [Vibrio angustum S14] Length = 643 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 55/166 (33%), Gaps = 9/166 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + G F G E + I +E+ Y EV PL++ +G Sbjct: 255 FHMQQEAPGMVFWHHNGWTIFRE---LEVFIREKLNEYDYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + + K Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMVYDTYKTFGF 414 >gi|223984594|ref|ZP_03634721.1| hypothetical protein HOLDEFILI_02017 [Holdemania filiformis DSM 12042] gi|223963441|gb|EEF67826.1| hypothetical protein HOLDEFILI_02017 [Holdemania filiformis DSM 12042] Length = 590 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 104/325 (32%), Gaps = 41/325 (12%) Query: 46 DIRARRNSNSAQIGQAIAEGNLSLVDAL---KNETSTLKEQLPILEKEEHEVCSSLKKLI 102 I + G+ I +S +AL K++ L + E + C S Sbjct: 72 KIEKEMKKIAKD-GKRIVRHEISKAEALEMFKDDPYKLDLIGHMDEDDTVISCYSQGDFT 130 Query: 103 SCIPNVPLEEV--------------PIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 +E V AN +L R G + + E Sbjct: 131 DLCRGPHVESVKELKHFKLLKVSGAYWKGDANNKMLQRVYGICFDTDEEVQNYLNFLEEA 190 Query: 149 GLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 D + + F + L L + + HT E GY + P++ Sbjct: 191 KKRDHKKLGRELDLFMMSEYGPGFPFFLPNGMILRNVLENYWYEEHTKE-GYQFIKTPIM 249 Query: 201 VRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTL 257 + + +G + D+M+ T + P + +Y + + K LPLR L Sbjct: 250 LSKDLWELSGHWANYQDNMYTTMIDDREFAIKPMNCPGGILVYKNGLHSYKDLPLRIGEL 309 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 R EA A G+ R F + + RE+ +E R+++ + + L Y Sbjct: 310 GQVHRHEASGAL---NGLFRVRTFTQDDAHIFMREDQIESEVVRLINFIDRVYSVFGLSY 366 Query: 318 RVVSLCTGDLGFSACKTY--DLEVW 340 + +L K Y +E+W Sbjct: 367 EI------ELSTRPEKKYIGSIEIW 385 >gi|145634324|ref|ZP_01790034.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA] gi|145268304|gb|EDK08298.1| threonyl-tRNA synthetase [Haemophilus influenzae PittAA] Length = 643 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|189345705|ref|YP_001942234.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245] gi|238692169|sp|B3EEC1|SYT_CHLL2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189339852|gb|ACD89255.1| threonyl-tRNA synthetase [Chlorobium limicola DSM 245] Length = 657 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 55/189 (29%), Gaps = 22/189 (11%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV----SLTNLYSH-- 242 + GY V P + E +G P ++D F E + + H Sbjct: 298 KRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPLTYHDEDGKQEQYLLKPMNCPHHHLI 357 Query: 243 ---EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ + LP+R T +R E + G++R F + + E E Sbjct: 358 YSSKLRSYRDLPIRLTEFGTVYRHEQSG---ELNGLVRARGFTQDDSHIYCTPEQLVDEI 414 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + + + L L D E+W + RE Sbjct: 415 CNAIDLTQFVFGTLGFSEVQTRLSMHDPANQQKYGGTAEIWEQAEKDVREA--------- 465 Query: 360 QSRRMNSRY 368 + RM Y Sbjct: 466 -ADRMGIDY 473 >gi|294340009|emb|CAZ88373.1| threonine tRNA synthetase [Thiomonas sp. 3As] Length = 639 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 6/168 (3%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + D A + + + GY EV P ++ +G Sbjct: 248 KELDLFHFQEEAPGLAFWHPKGWALWQAVEQYMRQVYRDSGYQEVKGPQILDVSLWKRSG 307 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 ++++MF T + ++ +++ + + LP+R+ R+E Sbjct: 308 HWDNYSENMFFTESEKRQFAVKPMNCPGHIQIFNSGLRSYRDLPIRYGEFGSCHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G+LR F + + E+ E A ++ Sbjct: 368 ALH---GLLRVRGFTQDDGHIFCTEDQIEAEVTAFHQQAMQVYTDFGF 412 >gi|240949517|ref|ZP_04753857.1| threonyl-tRNA synthetase [Actinobacillus minor NM305] gi|240296090|gb|EER46751.1| threonyl-tRNA synthetase [Actinobacillus minor NM305] Length = 643 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 88/312 (28%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D + + I+ + R + + + ++ + E + + Sbjct: 105 DIDLDRSLTQEDIDALEKRMLELAKTNYDVVKKRVSWQEARDTFESRGEPYKMAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR-------- 139 K++ ++ I + + + + + S + + Sbjct: 165 SKDDSPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWA 224 Query: 140 ------EHFEIGEALGLMD-------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 ++ + E D D A V + + + Sbjct: 225 DKKQLADYLQRLEEAAKRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG +AD MF T + P + +++ Sbjct: 285 LKEYDYQEVKGPFMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP+R R+E + G++R F + + EE +E + Sbjct: 345 LKSYRDLPIRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEEQIESEVTSCI 401 Query: 304 SCAEEILKRLDL 315 +I Sbjct: 402 KMVYDIYSTFGF 413 >gi|326201674|ref|ZP_08191545.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325988274|gb|EGD49099.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 635 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 96/317 (30%), Gaps = 24/317 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARR-----NSNSAQIGQAIAEGNLSLVDALKN 75 R + + S++++ +IK ED++ R N + + + L+ L Sbjct: 108 REKPFSIDELESIEKEMEKIIK--EDLKLERFSLPRNEAIKFMEEKAESYKVELIKDL-P 164 Query: 76 ETSTLKE-QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E + + S + I + + + +L R G Sbjct: 165 EGEEISFYKQGDFTDLCAGPHLSGTVKLKAIKLLSVAGAYWRGNEKNKMLQRIYGTAFPK 224 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLH 186 E+ E D + + F L L F H Sbjct: 225 KSQLDEYLFRMEEAKKRDHRKLGRELDLFDILDEGPGFPFFMPKGMVLRNLLEDFWRSEH 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 + GY E+ P+++ E +G + ++M+ + P + ++ + Sbjct: 285 -KKAGYQEIKTPVILNKELWLRSGHWDTYKENMYTVDIDEQEYAIKPMNCPGGILVFKRK 343 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP R L R E A G++R F + + E E ++ Sbjct: 344 LHSYRDLPQRMGELGLVHRHELSGALH---GLMRVRCFTQDDAHIFMTPEQITDEIVGVI 400 Query: 304 SCAEEILKRLDLHYRVV 320 + ++ K Y V Sbjct: 401 NLIDDFYKVFGFKYNVE 417 >gi|325527705|gb|EGD04994.1| threonyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 406 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 55/166 (33%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 + + + ++ + + + I + G++EV P ++ +G Sbjct: 13 LELFHQQDESPGAIFWHPRGMVLLRVVEDYIRARMRQAGFSEVRTPQIIARSLWEQSGHW 72 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF MF L P S ++ + + LP+R++ R+E A Sbjct: 73 EKFGRGMFSLQSDDRPYCLKPMSCPCHVQIFRKGVRSYRDLPVRYSEFGAVHRAEPSGAL 132 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + + R + E R + I Sbjct: 133 H---GLMRARAFTQDDAHVLCRPDQVEAEVARFCMLLKSIYADFGF 175 >gi|194335337|ref|YP_002017131.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|238693365|sp|B4SB93|SYT_PELPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194307814|gb|ACF42514.1| threonyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 657 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 57/189 (30%), Gaps = 22/189 (11%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV----SLTNLYSH-- 242 + GY V P + E +G P ++D F E + + H Sbjct: 298 KRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPLTYHDEEGKQEQYLLKPMNCPHHHLI 357 Query: 243 ---EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ + LPLR T +R E + G++R F + + R + E Sbjct: 358 YSSKMRSYRDLPLRLTEFGTVYRHEQSG---ELNGLVRARGFTQDDSHIYCRPDQLVDEI 414 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + + + L L D A EVW + +E Sbjct: 415 CSAIELTQFVFGTLGFSEVQTRLSMHDPENQAKYGGTAEVWEQAEKDVQEA--------- 465 Query: 360 QSRRMNSRY 368 + RM Y Sbjct: 466 -ADRMGIDY 473 >gi|294101704|ref|YP_003553562.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] gi|293616684|gb|ADE56838.1| threonyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] Length = 633 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 78/297 (26%), Gaps = 22/297 (7%) Query: 50 RRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLKEQLPILEKEEHEVCSSL---KKLISCI 105 R + A + L E L I Sbjct: 132 ERQILKKEEAIAFFKERGEKYKVELIEEIEDGTVSLYRQGDYVDLCRGPHVPNTSWIKHF 191 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG---- 161 + + +L R G + + + E D + K Sbjct: 192 KLLSVAGAYWRGDEKNIMLTRVYGTAFADEESLQTYITRLEEAKNRDHRKIGKELDLFSI 251 Query: 162 ----ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 F + L +F +H ++GY E+ PL++ +G + D Sbjct: 252 QPEGPGFPFFHPKGMAILNKLTEFWRQVH-EKNGYCEIRTPLILDRSLWIRSGHWDHYRD 310 Query: 218 DMFCTTDGRWLIPTSEV---SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 +M+ T + +Y +I + LPLR L R E G Sbjct: 311 NMYFTEIDEMPFAIKPMNCPGGILIYKSQIRSYRDLPLRMAELGIVHRHERSGVLH---G 367 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR---LDLHYRVVSLCTGDLG 328 ++R F + + E E + ++ + I + + + +G Sbjct: 368 LMRVRCFTQDDAHLYCTPEQVKDEIKGIMYLCQYIYRDIFGFKYTMELSTRPENSMG 424 >gi|153803259|ref|ZP_01957845.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3] gi|124121199|gb|EAY39942.1| threonyl-tRNA synthetase [Vibrio cholerae MZO-3] Length = 516 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 126 LDLFHMQQEAPGMVFWHHNGWSVFRDLEIFIRHKLNEYGYQEVKGPLMMDRVLWERSGHW 185 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 186 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 245 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 246 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 298 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 299 PEKRVGSDEIWDKSEQA 315 >gi|260774298|ref|ZP_05883213.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] gi|260611259|gb|EEX36463.1| threonyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] Length = 642 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 61/197 (30%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+ Y EV PL++ +G Sbjct: 252 LDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRHKLTEYDYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + V L T Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYNTFGFENIAVKLSTR---- 424 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 425 PEKRVGSDEIWDKSEEA 441 >gi|113867357|ref|YP_725846.1| threonyl-tRNA synthetase [Ralstonia eutropha H16] gi|123134164|sp|Q0KBZ3|SYT_RALEH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113526133|emb|CAJ92478.1| Threonyl-tRNA synthetase [Ralstonia eutropha H16] Length = 635 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + ++ GY EV P ++ +G Sbjct: 250 LDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTDAGYDEVRTPQVMDRSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + +++H + + LPLR R+E Sbjct: 310 QNYKENMFVTESEK--RDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + EE E + A + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFSVYDDFGF 412 >gi|33152811|ref|NP_874164.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP] gi|71153574|sp|Q7VKR9|SYT_HAEDU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33149036|gb|AAP96553.1| threonyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 643 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 55/175 (31%), Gaps = 6/175 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + EE +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIESEVTACIKMVYDIYSTFGFTNIFVKLST 422 >gi|307256244|ref|ZP_07538030.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865263|gb|EFM97160.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 643 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + D +W Sbjct: 424 PENRIGDDAMW 434 >gi|285017864|ref|YP_003375575.1| threonyl-tRNA synthetase (threonine--tRNA ligase) protein [Xanthomonas albilineans GPE PC73] gi|283473082|emb|CBA15587.1| probable threonyl-trna synthetase (threonine--trna ligase) protein [Xanthomonas albilineans] Length = 634 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D V + + + ++GY EV P ++ +G Sbjct: 251 LDLFHLQEEGPGLVFWHPKGWSIWQVVEQYMRKVYRDNGYGEVRCPQILDVSLWQQSGHW 310 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D+MF T + ++ +++ + + LP+R+ R+E A Sbjct: 311 DNYQDNMFFTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G+LR F + + E+ E A ++ Sbjct: 371 H---GILRVRGFTQDDGHIFCTEQQIEAEVTAFHRQALKVYTDFGF 413 >gi|149180875|ref|ZP_01859377.1| threonyl-tRNA synthetase [Bacillus sp. SG-1] gi|148851394|gb|EDL65542.1| threonyl-tRNA synthetase [Bacillus sp. SG-1] Length = 647 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 56/168 (33%), Gaps = 9/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + + G F + G E + + + Y EV P+++ + +G Sbjct: 257 FMFSEEAPGMPFYLNNGQKIRNE---LESFLRQIQNSFDYEEVRTPIMMNRKLWEQSGHW 313 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++M+ + ++ ++ ++ + LP+R R E A Sbjct: 314 EHYKENMYFSEVDDQSFALKPMNCPGHMLIFKDKLHSYRDLPIRMAEFGQVHRHEFSGAL 373 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 GMLR F + + + E L + + + +Y Sbjct: 374 ---NGMLRVRTFCQDDAHIFVTPDQIEEEITSALKLIDHVYRTFGFNY 418 >gi|145631389|ref|ZP_01787160.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021] gi|144983048|gb|EDJ90552.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021] Length = 643 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|301170119|emb|CBW29723.1| threonyl-tRNA synthetase [Haemophilus influenzae 10810] Length = 643 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|194289383|ref|YP_002005290.1| threonyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|238692758|sp|B3R4J1|SYT_CUPTR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|193223218|emb|CAQ69223.1| threonine tRNA synthetase [Cupriavidus taiwanensis LMG 19424] Length = 635 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + ++ GY EV P ++ +G Sbjct: 250 LDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLTDAGYDEVRTPQVMDRSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + +++H + + LPLR R+E Sbjct: 310 QNYKENMFVTESEK--RDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + EE E + A + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEEQIVAEAKAFNELAFSVYDDFGF 412 >gi|319426373|gb|ADV54447.1| threonyl-tRNA synthetase [Shewanella putrefaciens 200] Length = 642 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 87/312 (27%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D ++++ IE + R + + + ++ A + E + + Sbjct: 105 DIDLEHKLTQDDIEALEKRMLQLAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K+ ++ + + + + + S + + + A Sbjct: 165 SKDATPALYHHEEYTDMCRGPHVPNMRFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALSTHLTRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +++ Y EV PL++ +G K+++ MF T + P + +++ Sbjct: 285 LNQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTSSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + E+ E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEDQVQEEVSACI 401 Query: 304 SCAEEILKRLDL 315 + Sbjct: 402 QMVYDTYSTFGF 413 >gi|330445795|ref|ZP_08309447.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489986|dbj|GAA03944.1| threonyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 643 Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 55/166 (33%), Gaps = 9/166 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + G F G E + + +E+ Y EV PL++ +G Sbjct: 255 FHMQQEAPGMVFWHHNGWTIFRE---LEVFVREKLNEYDYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + + K Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEAQVQQEVTSCIEMVYDTYKTFGF 414 >gi|330829614|ref|YP_004392566.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas veronii B565] gi|328804750|gb|AEB49949.1| Threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Aeromonas veronii B565] Length = 642 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 61/200 (30%), Gaps = 10/200 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + I E+ Y EV P ++ +G Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRVLWERSGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+A MF T + P + +++ + + LPLR R+E + Sbjct: 311 EKYAQAMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ VV L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIMEEVSGCIRMVYDVYGTFGFENIVVKLSTR---- 423 Query: 330 SACKTYDLEVWLAGQNLYRE 349 + E+W + E Sbjct: 424 PEQRIGSDEMWDRAEKALAE 443 >gi|193211793|ref|YP_001997746.1| threonyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] gi|193085270|gb|ACF10546.1| threonyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] Length = 661 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 57/189 (30%), Gaps = 22/189 (11%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV----SLTNLYSH-- 242 + GY V P + E +G P ++D F + E + + H Sbjct: 302 KRGYVPVYTPHIGNIELYKRSGHYPYYSDSQFPPLTYKDETGREEQYLLKPMNCPHHHLI 361 Query: 243 ---EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + + LP+R T +R E + G++R F + + R + E Sbjct: 362 YSQTLRSYRDLPIRLTEFGTVYRHEQSG---ELNGLVRARGFTQDDSHIYCRPDQLVDEI 418 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + + L L D + EVW + +E Sbjct: 419 CNAIDLTRFVFNTLGFDDVETRLSLHDPENQSKYGGTAEVWEQAEKDVKEA--------- 469 Query: 360 QSRRMNSRY 368 + RM +Y Sbjct: 470 -ADRMGIKY 477 >gi|70729481|ref|YP_259219.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] gi|68343780|gb|AAY91386.1| threonyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] Length = 640 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 52/169 (30%), Gaps = 10/169 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + ++GY E+ P +V +G +A++MF Sbjct: 258 EAPGMVFWHPNGWTLYQVLEQYMRKVQRDNGYLEIKTPQVVDRSLWEKSGHWANYAENMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 +R F + + E+ E + ++ + L T Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTMDVYADFGFKDIEMKLST 421 >gi|15615703|ref|NP_244007.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125] gi|20139931|sp|Q9K866|SYT_BACHD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|10175763|dbj|BAB06860.1| threonyl-tRNA synthetase 1 [Bacillus halodurans C-125] Length = 645 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 109/352 (30%), Gaps = 32/352 (9%) Query: 23 LEPQSEY------ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 + + + ++++ + +I E++ R S + +A+A Sbjct: 109 YDVDMDESLTPEDLPKIEKEMKKIIG--ENLPIERVVVSRE--EALARYEEVGDPYKIEL 164 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE-------VPIGTSANENILIRSVG 129 + L E I E+ E + + E ++ +L R G Sbjct: 165 INDLPEDETITIYEQGEFFDLCRGVHVPSTGKLKEFKLLNLAGAYWRGDSSNKMLQRIYG 224 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDL 185 EH + E D + K + V G L + A + +I+ Sbjct: 225 TAFFKKADLDEHLRLLEEAKERDHRKLGKELGIFALSQKVGQGLPLWLPKGATIRRIIER 284 Query: 186 HTSEHG----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLT 237 + + Y V P+L E +G + DDMF T + L P + Sbjct: 285 YIVDKEEKLGYQHVYTPVLASSELYKTSGHWDHYKDDMFPTMEMENEELVLRPMNCPHHM 344 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 +Y E+ + LPLR L R E A G+ R + R + Sbjct: 345 MVYKTEMRSYRQLPLRIAELGLMHRYEMSGA---VSGLQRVRGMTLNDAHIFCRPDQIKD 401 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E R++ + + + L L D D +W Q + +E Sbjct: 402 EFVRVVRLIQAVYEDFGLKNYSFRLSYRDPEDKEKYFDDDNMWNKAQGMLKE 453 >gi|307245030|ref|ZP_07527126.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253984|ref|ZP_07535834.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258439|ref|ZP_07540179.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854073|gb|EFM86282.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863062|gb|EFM95006.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867501|gb|EFM99349.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 643 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + D +W Sbjct: 424 PENRIGDDAMW 434 >gi|260582696|ref|ZP_05850484.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127] gi|260094262|gb|EEW78162.1| threonyl-tRNA synthetase [Haemophilus influenzae NT127] Length = 643 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|165975675|ref|YP_001651268.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149490|ref|YP_001968015.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251658|ref|ZP_07337831.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251749|ref|ZP_07533652.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307260677|ref|ZP_07542367.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262809|ref|ZP_07544434.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238687519|sp|B0BSM2|SYT_ACTPJ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238692375|sp|B3H061|SYT_ACTP7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|165875776|gb|ABY68824.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914621|gb|ACE60873.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649500|gb|EFL79683.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860750|gb|EFM92760.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306869598|gb|EFN01385.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871824|gb|EFN03543.1| Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 643 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + D +W Sbjct: 424 PENRIGDDAMW 434 >gi|53728893|ref|ZP_00134603.2| COG0441: Threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207707|ref|YP_001052932.1| threonyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20] gi|166223315|sp|A3MYU1|SYT_ACTP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|126096499|gb|ABN73327.1| threonyl-tRNA synthetase ThrS [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 643 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + D +W Sbjct: 424 PENRIGDDAMW 434 >gi|163814284|ref|ZP_02205673.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759] gi|158449919|gb|EDP26914.1| hypothetical protein COPEUT_00435 [Coprococcus eutactus ATCC 27759] Length = 587 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 101/342 (29%), Gaps = 29/342 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + +++++ + + ++ + +I + A + + + L++ Sbjct: 59 EDLAAIEKEMKKI------AKSGKKIIRKEISKEEALEMFKDDEYKLDLINGLEDGTITC 112 Query: 88 EKEEHEVCSSLKKL------ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 ++ + + +L R G EH Sbjct: 113 YEQGDFTDLCRGPHVDNVKLCRNFKLIRHSGAYWKGDSKNKVLQRIYGVCFPTKEELEEH 172 Query: 142 FEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 ++ E D + K L G + + + L ++ + GY Sbjct: 173 LQLLEEAKERDHRKIGKDMQLFMVDDLVGRGLPMFLPKGYTVWQELENYIKRKE-RKLGY 231 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT----NLYSHEIIESK 248 V P + +G + D+MF + +Y++++ K Sbjct: 232 LHVMTPCVGTVNLYKTSGHWDHYKDNMFPAMEMEGESFVLRPMNCPHHMMIYANKMHSYK 291 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LP+R +A FR EA +G+ R F + + + E ++ + Sbjct: 292 DLPIRIAEIAHDFRFEASG---TLKGIERGRHFCQNDSHIFVTPDQIEEEFAGVVKLIFD 348 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 K + L D D E+W +N R + Sbjct: 349 TYKDFGITDYRCVLSLRDPEDKVKYHDDDEMWNKAENALRRV 390 >gi|84501632|ref|ZP_00999804.1| Threonyl-tRNA synthetase, class IIa [Oceanicola batsensis HTCC2597] gi|84390253|gb|EAQ02812.1| Threonyl-tRNA synthetase, class IIa [Oceanicola batsensis HTCC2597] Length = 659 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 88/333 (26%), Gaps = 43/333 (12%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + ++ + + +I + +R S I G V+ + Sbjct: 110 DREEPFTPEDLGRIEARMKEIINARDAVRTEVWSRDQAIAHYEKTGEPYKVE----LVNR 165 Query: 80 LKEQLPILEKEEHEVCSSLKKLIS-CIPNVPLEEV--------PIGTSANENILIRSVGK 130 + E PI + + VP + ++ +L R G Sbjct: 166 IPEGEPIRMYWHGDWQDLCRGPHLQHTGQVPADAFKLTHIAGAYWLGDSSRPMLQRIYGI 225 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLS-------GARFSVLTGHLAHLERALGQFMI 183 + + H + E D + + A V Q + Sbjct: 226 AFKNRNDLKAHLNMLEEAAKRDHRKLGREMGLFHMQEEAPGQVFWHPNGWTIYTTLQDYV 285 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------------TDGRWL 228 GY E++ P +V + +G K+ MF Sbjct: 286 RRKQRAGGYNEINTPQVVDRKLWEASGHWEKYQHHMFIVEVDESRDGEHDDAAAKSREHT 345 Query: 229 IPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 + + ++ + LPLR R E A G++R F + Sbjct: 346 RINALKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCARFEPSGALH---GIMRVRGFTQ 402 Query: 284 CELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 + EE E R + +I + L Sbjct: 403 DDAHIFCTEEQIQEECARFIDFLADIYRELGFP 435 >gi|207343684|gb|EDZ71074.1| YKL194Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 358 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 9/159 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + A + L +FM + G+ EV PL+ + +G +ADDMF Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 221 CT------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 + L P + ++ + LPLRF+ +P R+EA A G Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALS---G 171 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 + R +F + + +E L + + ++ Sbjct: 172 LTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKI 210 >gi|145636075|ref|ZP_01791745.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|229844174|ref|ZP_04464315.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1] gi|145270597|gb|EDK10530.1| threonyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|229813168|gb|EEP48856.1| threonyl-tRNA synthetase [Haemophilus influenzae 6P18H1] Length = 643 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|68250118|ref|YP_249230.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|81335458|sp|Q4QK77|SYT_HAEI8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|68058317|gb|AAX88570.1| threonyl-tRNA synthetase [Haemophilus influenzae 86-028NP] Length = 643 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|148825906|ref|YP_001290659.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|166223344|sp|A5UBX5|SYT_HAEIE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148716066|gb|ABQ98276.1| threonyl-tRNA synthetase [Haemophilus influenzae PittEE] Length = 643 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|145629552|ref|ZP_01785350.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|145632888|ref|ZP_01788621.1| threonyl-tRNA synthetase [Haemophilus influenzae 3655] gi|145639038|ref|ZP_01794646.1| threonyl-tRNA synthetase [Haemophilus influenzae PittII] gi|145641382|ref|ZP_01796961.1| threonyl-tRNA synthetase [Haemophilus influenzae R3021] gi|144978395|gb|EDJ88159.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|144986544|gb|EDJ93110.1| threonyl-tRNA synthetase [Haemophilus influenzae 3655] gi|145272010|gb|EDK11919.1| threonyl-tRNA synthetase [Haemophilus influenzae PittII] gi|145273925|gb|EDK13792.1| threonyl-tRNA synthetase [Haemophilus influenzae 22.4-21] gi|309750996|gb|ADO80980.1| Threonyl-tRNA synthetase [Haemophilus influenzae R2866] Length = 643 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|121610033|ref|YP_997840.1| threonyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] gi|166225514|sp|A1WMG5|SYT_VEREI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|121554673|gb|ABM58822.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] Length = 639 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + +V + + ++GY EV P ++ TG K+ ++MF Sbjct: 258 HSPGTVFWHPKGWTLWQEVEQYMRRVYRDNGYQEVKGPQILDQGLWEKTGHWDKYRENMF 317 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T L P + ++ I + LPLRF R+E G++R Sbjct: 318 VTESEKRDYALKPMNCPGHIIIFKQGIKSYRDLPLRFGEFGQCHRNEPSGGLH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + + +E + +++ + Sbjct: 375 VRAFTQDDGHIFCTAQQIQSEILAFTALVQKVYRDFGF 412 >gi|16273277|ref|NP_439518.1| threonyl-tRNA synthetase [Haemophilus influenzae Rd KW20] gi|260580800|ref|ZP_05848626.1| threonyl-tRNA synthetase [Haemophilus influenzae RdAW] gi|1174548|sp|P43014|SYT_HAEIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|1574199|gb|AAC23014.1| threonyl-tRNA synthetase (thrS) [Haemophilus influenzae Rd KW20] gi|260092617|gb|EEW76554.1| threonyl-tRNA synthetase [Haemophilus influenzae RdAW] Length = 643 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|309973051|gb|ADO96252.1| Threonyl-tRNA synthetase [Haemophilus influenzae R2846] Length = 643 Score = 53.2 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|322514773|ref|ZP_08067797.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976] gi|322119269|gb|EFX91397.1| threonine--tRNA ligase [Actinobacillus ureae ATCC 25976] Length = 653 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 261 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHW 320 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 321 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 380 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 381 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFSNIQVKLSTR---- 433 Query: 330 SACKTYDLEVW 340 + D +W Sbjct: 434 PENRIGDDAMW 444 >gi|209523462|ref|ZP_03272017.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209496204|gb|EDZ96504.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 622 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 65/205 (31%), Gaps = 11/205 (5%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + +G + + + + H + GY + +P + E Sbjct: 230 QELDLFSIQEDAGGGLVFWHPKGSRMRLLIEDYWRQAHLQD-GYELLYSPHIANLELWKT 288 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSE 264 +G + ++MF + + + + + LP+R+ L +R E Sbjct: 289 SGHYDFYRENMFDQIEIENQSYQLKPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYE 348 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH---YRVVS 321 G++R F + + E E +L+ E+IL + + Sbjct: 349 RSGVLH---GLMRVRGFTQDDAHIFCLPEQVADEILGVLNLTEKILSDFGFSKYEVNLST 405 Query: 322 LCTGDLGFSACKTYDLEVWLAGQNL 346 + +G A + +A N Sbjct: 406 RPSKSVGNDAVWQLATDALIAALNT 430 >gi|146293114|ref|YP_001183538.1| threonyl-tRNA synthetase [Shewanella putrefaciens CN-32] gi|166225500|sp|A4Y706|SYT_SHEPC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145564804|gb|ABP75739.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella putrefaciens CN-32] Length = 642 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 87/312 (27%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D ++++ IE + R + + + ++ A + E + + Sbjct: 105 DIDLEHKLTQDDIEALEKRMLQLAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K+ ++ + + + + + S + + + A Sbjct: 165 SKDATPALYHHEEYTDMCRGPHVPNMRFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALSTHLTRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +++ Y EV PL++ +G K+++ MF T + P + +++ Sbjct: 285 LNQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTSSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + ++ E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTDDQVQEEVSACI 401 Query: 304 SCAEEILKRLDL 315 + Sbjct: 402 QMVYDTYSTFGF 413 >gi|319776351|ref|YP_004138839.1| threonyl-tRNA synthetase [Haemophilus influenzae F3047] gi|329123506|ref|ZP_08252070.1| threonine--tRNA ligase [Haemophilus aegyptius ATCC 11116] gi|317450942|emb|CBY87169.1| threonyl-tRNA synthetase [Haemophilus influenzae F3047] gi|327471088|gb|EGF16543.1| threonine--tRNA ligase [Haemophilus aegyptius ATCC 11116] Length = 643 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|229846781|ref|ZP_04466888.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|229810270|gb|EEP45989.1| threonyl-tRNA synthetase [Haemophilus influenzae 7P49H1] Length = 643 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|194382272|dbj|BAG58891.1| unnamed protein product [Homo sapiens] Length = 236 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 9/134 (6%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDIERFCACPEEAAHALELRKGELRSADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +A + V L+ ++++L L E ++ +PN + Sbjct: 118 RALLANQDSGEVQQDPKYQGLRARGREIRKELVHLYPREAQLEEQFYLQALKLPNQTHPD 177 Query: 113 VPIGTSANENILIR 126 VP+G + +L Sbjct: 178 VPVGDESQARVLHM 191 >gi|319897020|ref|YP_004135215.1| threonyl-tRNA synthetase [Haemophilus influenzae F3031] gi|317432524|emb|CBY80883.1| threonyl-tRNA synthetase [Haemophilus influenzae F3031] Length = 643 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|317487453|ref|ZP_07946240.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316921312|gb|EFV42611.1| threonyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 646 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 65/175 (37%), Gaps = 7/175 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + A L L F+ H + GY V P ++R E Sbjct: 249 KELDLFAFHEDVAAGMVFWLPKGMLLRTILEDFLRREHI-KRGYQLVQGPQVLRRELWEQ 307 Query: 209 TGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 +G + ++M+ T D + P + VS +Y+ + + LP R+ L R E Sbjct: 308 SGHYANYRENMYFTEIEGDMYGIKPMNCVSHMLIYNAHLRSYRELPQRYFELGVVHRHEK 367 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 G+LR QF + + I E E +++ +++ YRVV Sbjct: 368 SGVLH---GLLRVRQFTQDDAHIICAPEQLEDEIIGVIALVRDLMALFGFQYRVV 419 >gi|148826837|ref|YP_001291590.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG] gi|166223345|sp|A5UEK1|SYT_HAEIG RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148718079|gb|ABQ99206.1| threonyl-tRNA synthetase [Haemophilus influenzae PittGG] Length = 643 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|225873756|ref|YP_002755215.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] gi|259516262|sp|C1F9K5|SYT_ACIC5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|225794268|gb|ACO34358.1| threonine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] Length = 681 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 79/235 (33%), Gaps = 20/235 (8%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D +++GA A + + + +M + GY V P ++R + Sbjct: 285 KQLDLFSIQEIAGAGLIFWHPKGAMIRKIMEDWMREE-CIRRGYDLVYTPHVMRVQLWKT 343 Query: 209 TGQIPKFADDMFCTTD----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 +G ++ +MF + L P + +Y + + LP+R+ L +R E Sbjct: 344 SGHEGFYSQNMFTPMELDDAEYRLKPMNCPGHILIYKSQPRSYRDLPVRYAELGNVYRYE 403 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G+LR F + + E E + A+ +L V L T Sbjct: 404 RSG---TMHGLLRVRGFTQDDAHIFCTPEQIEDEVVACIDFAQSVLTTFGFMDFQVELST 460 Query: 325 GDLGFSACKTYDLEVWLAGQNLY-REISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 D D + + + + ISS + R Y+ ++ + Sbjct: 461 WDPN-------DRKNYAGSDDKWNLAISSLESALT----RKGIAYKTIAGEAAFY 504 >gi|120598808|ref|YP_963382.1| threonyl-tRNA synthetase [Shewanella sp. W3-18-1] gi|166225502|sp|A1RJI3|SYT_SHESW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|120558901|gb|ABM24828.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Shewanella sp. W3-18-1] Length = 642 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 87/312 (27%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D ++++ IE + R + + + ++ A + E + + Sbjct: 105 DIDLEHKLTQDDIEALEKRMLQLAKTNYDVVKRVVSWQEARDTFAARGEEYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K+ ++ + + + + + S + + + A Sbjct: 165 SKDATPALYHHEEYTDMCRGPHVPNMRFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALSTHLTRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +++ Y EV PL++ +G K+++ MF T + P + +++ Sbjct: 285 LNQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTSSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + ++ E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTDDQVQEEVSACI 401 Query: 304 SCAEEILKRLDL 315 + Sbjct: 402 QMVYDTYSTFGF 413 >gi|291542490|emb|CBL15600.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus bromii L2-63] Length = 648 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 87/315 (27%), Gaps = 40/315 (12%) Query: 43 KIEDIRARRNSNSAQIGQAIA-EGNLSLVDALKNETST------LKEQLPILEKEEHEVC 95 +E I+A + E + + E + +KE E Sbjct: 116 DLEKIKAEMKKIVKSGLELERVELSPEEAEKKLEEMNEPYKVELVKEHSDKGEHITFYKQ 175 Query: 96 SSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH-------------LSREHF 142 C + PI + + EH Sbjct: 176 GEFID--LCAGPHLMSVAPIKAIELTACTGAYWRGDANNAQLCRVYGVAFPKASMLEEHL 233 Query: 143 EIGEALGLMD---FDRATKLSGARFSVLTGHLAHLER-----ALGQFMIDLHTSEHGYTE 194 + E L D R + V G L + L Q ++ G Sbjct: 234 KKLEEAKLRDHNKLGRELEYFTTVDYVGQGLPILLPKGARVVQLLQRWVEDVEQSKGCLL 293 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT--SEVSLTNLYSHE-----IIES 247 PLL + + +G + D MF D + +T + ++ Sbjct: 294 TKTPLLAKRDLYKISGHWDHYLDGMFVLGDPHDEEKECFALRPMTCPFQYQVYLNKQRSY 353 Query: 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAE 307 + LP+R T + FR+EA + G++R QF E I R + E + L A+ Sbjct: 354 RDLPMRLTETSTLFRNEASG---EMHGLIRVRQFTISEGHYILRPDQLEQEFKGCLELAK 410 Query: 308 EILKRLDLHYRVVSL 322 L + L Sbjct: 411 YFLDTVGLLENCTFR 425 >gi|255531804|ref|YP_003092176.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366] gi|255344788|gb|ACU04114.1| threonyl-tRNA synthetase [Pedobacter heparinus DSM 2366] Length = 641 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 91/336 (27%), Gaps = 25/336 (7%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLKE 82 E S+ ++ K L ++ E R + S E L K Sbjct: 112 EFSSDDFKEIEAKILELARQKEVF--ERKAVSKADAIKYFEEKGDEYKLDLLEGLQDGKI 169 Query: 83 QLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 + + + + + L R G Sbjct: 170 TFYTQGEFTDLCRGPHIPNTGFVKAVKLMNVAGAYWRGDETRKQLTRIYGVTFPKASELT 229 Query: 140 EHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 E+ + E D + K G + A L L QF+ + Sbjct: 230 EYLHMIEEAKKRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRERLVQFLTRAQA-KA 288 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSHEI 244 GY +V P + +G K+ D F + +L P + +Y + Sbjct: 289 GYEQVVTPHIGHKNLYITSGHYEKYGKDAFQPIKTPQEGEEFFLKPMNCPHHCEIYKTKP 348 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 K LPLRF +R E + G+ R F + + R + E ++++ Sbjct: 349 RSYKDLPLRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVID 405 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + K L + D A E W Sbjct: 406 LVLYVFKSLGFDDYTAQVSLRDPENKAKYIGSDENW 441 >gi|21674935|ref|NP_663000.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS] gi|34222753|sp|Q8KAN0|SYT_CHLTE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21648164|gb|AAM73342.1| threonyl-tRNA synthetase [Chlorobium tepidum TLS] Length = 657 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 57/189 (30%), Gaps = 22/189 (11%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV----SLTNLYSH-- 242 + GY V P + E +G P ++D F + E + + H Sbjct: 298 KRGYVPVYTPHIGNIELYKRSGHYPYYSDSQFPPLTYKDETGREEQYLLKPMNCPHHHLI 357 Query: 243 ---EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + + LP+R T +R E + G++R F + + R + E Sbjct: 358 YSQTLRSYRDLPIRLTEFGTVYRHEQSG---ELNGLVRARGFTQDDSHIYCRPDQLVDEI 414 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + + L L D + EVW + +E Sbjct: 415 CNAIDLTRFVFNTLGFDEVETRLSLHDPENQSKYGGTAEVWGQAEKDVKEA--------- 465 Query: 360 QSRRMNSRY 368 + RM +Y Sbjct: 466 -ADRMGIKY 473 >gi|304408774|ref|ZP_07390395.1| threonyl-tRNA synthetase [Shewanella baltica OS183] gi|307302777|ref|ZP_07582532.1| threonyl-tRNA synthetase [Shewanella baltica BA175] gi|304352595|gb|EFM16992.1| threonyl-tRNA synthetase [Shewanella baltica OS183] gi|306913137|gb|EFN43559.1| threonyl-tRNA synthetase [Shewanella baltica BA175] Length = 642 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 86/312 (27%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D ++++ I+ + R + I + ++ A + E + + Sbjct: 105 DIDLEHKLTQDDIDALEKRMLQLAKTNYDVIKRVVSWQEARDTFAARGEDYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K+ ++ + + + + + S + + + A Sbjct: 165 SKDATPALYHHEEYTDMCRGPHVPNMRFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALSTHLTRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +++ Y EV PL++ +G K+++ MF T + P + +++ Sbjct: 285 LNQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTSSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + + E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTDSQVQEEVSACI 401 Query: 304 SCAEEILKRLDL 315 + Sbjct: 402 QMVYDTYATFGF 413 >gi|254462954|ref|ZP_05076370.1| threonyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083] gi|206679543|gb|EDZ44030.1| threonyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 643 Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 96/343 (27%), Gaps = 23/343 (6%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++K + +I + +R + I V+ + Sbjct: 110 DRQEPFTPEDLSVIEKKMKEIINARDAVRTEVWDRARAIKHYEDNNEPYKVELIDAIPGD 169 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV-----PIGTSANENILIRSVGKKPSA 134 ++ + + +P + + ++ +L R G + Sbjct: 170 EPLRMYWHGDWQDMCRGPHLQHTGQVPGDSWKLMSVAGAYWRGDSDRPMLQRIYGAAFAN 229 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHT 187 + H E D + + G A SV+ + Sbjct: 230 KEQLKAHLTFLEEAAKRDHRKLGREMGLFHFEEVAPGSVIWHPNGWRVFQTLIAYMRRRQ 289 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHE 243 GY EV+ P ++ +G + ++MF L P + +Y+H Sbjct: 290 DVAGYVEVNTPDIMDRALWETSGHWFNYKENMFLAQTQDDRDYALKPMNCPGHMMVYNHS 349 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP++ R E A G+LR F + + E E ++ Sbjct: 350 LRSYRDLPVKIAEFGKVHRYEPSGALH---GLLRVRSFTQDDAHIYCSPEQLTDECLKVN 406 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 I K V L T + E W + Sbjct: 407 DLILSIYKDFGFEDVHVKLSTR----PENRIGSDESWDLSEGA 445 >gi|189485254|ref|YP_001956195.1| threonyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287213|dbj|BAG13734.1| threonyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 598 Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 71/200 (35%), Gaps = 13/200 (6%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D + G + A L+ + + H E+GY +S P + +E +G Sbjct: 209 DLFSIDETVGGGLVLWHPKGALLKDIIENYWKKFHL-ENGYDLLSTPHIASEELFKVSGH 267 Query: 212 IPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAG 266 + ++++M+ + + P + +Y ++ + LP+R+ L +R E Sbjct: 268 LQTYSENMYASMEIEG-KPYRIKPMNCPMHLMIYKTKLHSYRELPVRYAELGTVYRFEKS 326 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 G+LR F + + I E E + + A LK + + T Sbjct: 327 GVLH---GLLRVRGFTQDDGHIIVAPEQLEEEMLGVFNMAVNCLKTFGFNEYKIYFAT-- 381 Query: 327 LGFSACKTYDLEVWLAGQNL 346 ++E W QN Sbjct: 382 -RPEKKYVGEIEYWEKAQNS 400 >gi|156842346|ref|XP_001644541.1| hypothetical protein Kpol_1052p30 [Vanderwaltozyma polyspora DSM 70294] gi|156115186|gb|EDO16683.1| hypothetical protein Kpol_1052p30 [Vanderwaltozyma polyspora DSM 70294] Length = 463 Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 9/160 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + A + L QFM + G+ EV P++ R +G + +DM Sbjct: 55 ISPGSVFFLPNGAKIFNKLVQFMKLQQEHKFGFKEVITPIIYRKSLWEQSGHWENYKEDM 114 Query: 220 FCT------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 F + L P + ++ LPLR + +P R+EA A Sbjct: 115 FKVEGQDISKEEYGLKPMNCPGHCMIFKKFDRSYHELPLRLSDFSPLHRNEASGALS--- 171 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 G+ R +F + + +E E + L + R+ Sbjct: 172 GLTRVRKFHQDDGHIFCTKEQVEEEIIKCLKMVDLCYSRV 211 >gi|330951866|gb|EGH52126.1| threonyl-tRNA synthetase [Pseudomonas syringae Cit 7] Length = 640 Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|315634189|ref|ZP_07889478.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393] gi|315477439|gb|EFU68182.1| threonine--tRNA ligase [Aggregatibacter segnis ATCC 33393] Length = 643 Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFTNIFVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PEKRIGADEMW 434 >gi|148284343|ref|YP_001248433.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] gi|166225471|sp|A5CD12|SYT_ORITB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146739782|emb|CAM79649.1| threonyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] Length = 648 Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 55/184 (29%), Gaps = 21/184 (11%) Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + + A+ + + I GY EV+ P+++ + +G Sbjct: 249 RELELFHFQDEAQGMPFWHDKGWTIFKIIKNYISCQIQRAGYIEVNTPMVLSQKLWEKSG 308 Query: 211 QIPKFADDMFCTTDG-------------RWLIPTSEVSLTN-----LYSHEIIESKSLPL 252 KF ++MF + + ++++ I + LPL Sbjct: 309 HWEKFRENMFTLDTNVAEKDHNLIKDSIETKCALALKPMNCPGHIQIFNYTIKSYRDLPL 368 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 R R E A G++R F + + E+ E + +++ + Sbjct: 369 RMAEFGSCHRYEPSGALY---GLMRVRSFVQDDAHIFCTEDQITDETIKFCHLLKQVYQD 425 Query: 313 LDLH 316 Sbjct: 426 FGFP 429 >gi|66045402|ref|YP_235243.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a] gi|75502334|sp|Q4ZUG7|SYT_PSEU2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|63256109|gb|AAY37205.1| Threonyl-tRNA synthetase, class IIa [Pseudomonas syringae pv. syringae B728a] Length = 640 Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|325287305|ref|YP_004263095.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489] gi|324322759|gb|ADY30224.1| threonyl-tRNA synthetase [Cellulophaga lytica DSM 7489] Length = 647 Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 51/164 (31%), Gaps = 9/164 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYS-----H 242 + GY V P + + E +G K+ +D F + + + Sbjct: 288 KAGYEMVVTPHIGQKELYVTSGHYAKYGEDSFQPIKTPKMDEEFLLKPMNCPHHCEVFNF 347 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + K LP RF +R E + G+ R F + + + E + + Sbjct: 348 KPHSYKDLPKRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCTPDQLDQEFKNV 404 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + +L L + DL +E W +N Sbjct: 405 IDLSLYVLNSLGFTNFKAQVSVRDLNNPDKYIGSVENWEKAENA 448 >gi|254374591|ref|ZP_04990072.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548] gi|151572310|gb|EDN37964.1| threonyl-tRNA synthetase [Francisella novicida GA99-3548] Length = 634 Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 56/421 (13%), Positives = 124/421 (29%), Gaps = 85/421 (20%) Query: 53 SNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + ++ + + ++ K + K ++ +E + Sbjct: 119 TIEKKMKELAKKSAPVSYRVVPKAEAIEFFKAQGENYKVEIIDSIADEQVKIYTQDNFSD 178 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS--------------REHFEIGEALG 149 + + + L + + S + ++ + E Sbjct: 179 LCRGPHIPNTSVLKAFKLTKLAGAYWRGNSDNEMLTRIYGTCWATKEDLEQYLNMLEEAE 238 Query: 150 LMDFDRATKLSGARFS--------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 D + K+ + + R + +M + +++G +E+ PL+ Sbjct: 239 KRDHRKIGKVLDLFHFQEDSPGIAFWHDNGVRIWRQVEDYMRASN-NKYGCSEIRTPLIA 297 Query: 202 RDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +G K+A++MF T + P + + +Y+ ++ + LP+R Sbjct: 298 DFSLWQKSGHASKYAENMFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRIAEFG 357 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+E + G+LR F + + E E M+ E+ K + Sbjct: 358 IVHRNEPSGSLH---GLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDF 414 Query: 319 VVSLCTGDLGFSACKTYDLEVW--------------------LAGQNLYR---------- 348 V + + D E W L G+ + Sbjct: 415 AVKIALR----PENRIGDDETWDKSEQMLKNALDANNVSYELLPGEGAFYGPKIEFHLKD 470 Query: 349 EISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLN----GSGVAVGRCLIAILEN 399 I CG Q +R+ + Y D N + L+ GS R + ++E+ Sbjct: 471 AIGRSWQCGTIQLDFSMPQRLGATYIDKNGEKQVPV-MLHRAIVGSL---ERFIGMLIEH 526 Query: 400 Y 400 Y Sbjct: 527 Y 527 >gi|320353536|ref|YP_004194875.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] gi|320122038|gb|ADW17584.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] Length = 641 Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 57/165 (34%), Gaps = 8/165 (4%) Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 G + A L R + + D H +GY + P + R + +G + Sbjct: 257 TIQDQIGPGLILWQPRGALLRRLIEDYWKDEH-YRNGYQLLYTPHIARQDLWKTSGHLDF 315 Query: 215 FADDMFCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 + ++M+ + ++ + + + + + P+R+ L +R E A Sbjct: 316 YGENMYSAMEIDEVMYQLKPMNCPFHIGVYNADKHSYREFPIRWCELGTVYRYERTGALH 375 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + R + E ++ ILK Sbjct: 376 ---GLMRVRGFTQDDAHIFCRPDQLEEEIFNIIDLNLHILKTFGF 417 >gi|289673298|ref|ZP_06494188.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] gi|330898079|gb|EGH29498.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 640 Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|153835364|ref|ZP_01988031.1| threonyl-tRNA synthetase [Vibrio harveyi HY01] gi|148868112|gb|EDL67276.1| threonyl-tRNA synthetase [Vibrio harveyi HY01] Length = 642 Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 98/344 (28%), Gaps = 37/344 (10%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PI 86 + LDE +E I R + + + + D ++ K ++ Sbjct: 107 IDLDESL--TQDDLEKIEKRMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDEN 164 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEV--------------PIGTSANENILIRSVGKKP 132 + +++ ++ I + + +++ +L R G Sbjct: 165 VSRDDRPGLYHHEEYIDMCRGPHVPNMGFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAF 224 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------L 185 + H E D + K + D Sbjct: 225 HDKKALKAHLTRLEEAAKRDHRKLGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRS 284 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSH 242 E+GY EV PL++ +G K+AD MF T L P + +++ Sbjct: 285 KLDEYGYQEVKGPLIMDRVLWERSGHWDKYADAMFTTSSENREYALKPMNCPGHVQIFNQ 344 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LPLR R+E A G++R F + + E E Sbjct: 345 GLKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTNC 401 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + + VV L T + E+W + Sbjct: 402 IKMVYDTYQTFGFDNIVVKLSTR----PEKRVGSDEIWDQSEEA 441 >gi|319786721|ref|YP_004146196.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317465233|gb|ADV26965.1| threonyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 634 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E GY EV P ++ +G + D+MF Sbjct: 259 EAPGLVFWHPKGWSVWQVVEQYMRRVYRETGYGEVRCPQILDVSLWKKSGHWDNYQDNMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 319 FTESEKRTYAVKPMNCPGHVQIFNQGLHSYRDLPIRYGEFGSCHRNEPSGALH---GILR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ +E + A ++ Sbjct: 376 VRGFTQDDGHVFCTEQQIESEVRAFHAQALKVYTDFGF 413 >gi|114776996|ref|ZP_01452016.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] gi|114552517|gb|EAU54977.1| threonyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] Length = 634 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + I ++GY E+ P +V + +G Sbjct: 249 LDLFHLQEEAPGMIFWHPKGWSVWQQVENEIRGVMRDNGYQEIKTPQMVDRKLWEKSGHW 308 Query: 213 PKFADDMFCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF ++MF T + + I +++ + + LPLR R+E Sbjct: 309 DKFREEMFTTSTENRDYAIKPMNCPCHIQVFNQNLHSYRDLPLRLAEFGSCHRNEPSG-- 366 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + ++ KR Sbjct: 367 -TLHGLMRLRNFVQDDAHIFCTEAQIQDEVCNFIDLTYDVYKRFGF 411 >gi|91226476|ref|ZP_01261225.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|91189108|gb|EAS75389.1| threonyl-tRNA synthetase [Vibrio alginolyticus 12G01] Length = 410 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 88/309 (28%), Gaps = 33/309 (10%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PI 86 + LDE + +E I R + + + + D ++ K ++ Sbjct: 107 IDLDESL--TQEDLEKIEKRMKELAKTKYEVVKKKVSWQEARDTFESRGEPYKVEILDEN 164 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE------ 140 + +++ ++ I + + + + + S + + Sbjct: 165 VSRDDRPGLYHHEEYIDMCRGPHVPNMSFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAF 224 Query: 141 --------HFEIGEALGLMDFDRATKLSG-ARFSVLTGHLAHLERALGQFMID------L 185 H E D + K + D Sbjct: 225 HDKKALKAHLTRLEEAAKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRA 284 Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSH 242 E+GY EV PL++ +G K+AD MF T + P + +++ Sbjct: 285 KLDEYGYQEVKGPLMMDRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHVQIFNQ 344 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LPLR R+E A G++R F + + E E Sbjct: 345 GLKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHIFCTESQIQEEVTNC 401 Query: 303 LSCAEEILK 311 + + + Sbjct: 402 IKMVYDTYQ 410 >gi|83748297|ref|ZP_00945322.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551] gi|83725029|gb|EAP72182.1| Threonyl-tRNA synthetase [Ralstonia solanacearum UW551] Length = 635 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 91/304 (29%), Gaps = 22/304 (7%) Query: 28 EYILSLDEKNRILIKKIEDIRAR---RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 E ++++++K L KK E + RN + + E + + A E + Sbjct: 115 EDLVAIEKKMAELAKKDEKVTREVWSRNEAVKLF-EGMGEKYKAEIIASIPEDQEIGLYR 173 Query: 85 PILEKE-EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 + + + + +N +L R G + + Sbjct: 174 EGSFVDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQEAYLH 233 Query: 144 IGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVS 196 + E D + K A V + + + GY+EV Sbjct: 234 MLEEAEKRDHRKLGKQLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVR 293 Query: 197 APLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLP 251 P ++ +G + ++MF T + + + +++H + + LP Sbjct: 294 TPQVMDRTLWEHSGHWQNYKENMFVTESEK--REYAIKPMNCPGHVQIFNHGLRSYRDLP 351 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 LR R+E A G++R F + + E E + A + + Sbjct: 352 LRLAEFGACHRNEPSGALH---GLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSVYE 408 Query: 312 RLDL 315 Sbjct: 409 DFGF 412 >gi|330989241|gb|EGH87344.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 640 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|330973951|gb|EGH74017.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 640 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|330943371|gb|EGH45740.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 640 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|320324302|gb|EFW80381.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076] gi|320328576|gb|EFW84578.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] gi|330885566|gb|EGH19715.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 640 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|315498771|ref|YP_004087575.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48] gi|315416783|gb|ADU13424.1| threonyl-tRNA synthetase [Asticcacaulis excentricus CB 48] Length = 640 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 7/172 (4%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 R V + + GY EV P ++ +G K+ Sbjct: 256 HMQEEGRGMVFWHPHGWTLWRTLEAYMRRRLDAAGYVEVKTPQVLDRTFWEKSGHWDKYR 315 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEI----IESKSLPLRFTTLAPSFRSEAGSAGRDT 272 +MF + + + K LP+R R E + Sbjct: 316 PNMFVCETVEGETLSLKPMNCPGHVQIFKVGLRSYKELPIRMAEFGACHRYEPSGSLH-- 373 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + RE+ E + ++ ++ L + ++L T Sbjct: 374 -GLMRVRGFTQDDAHIFCREDQIVEETTKFITLCRQVHADLGMQAEHIALAT 424 >gi|289623636|ref|ZP_06456590.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647146|ref|ZP_06478489.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250] gi|298486701|ref|ZP_07004758.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158784|gb|EFH99847.1| Threonyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867695|gb|EGH02404.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 640 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|260551943|ref|ZP_05825805.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260405346|gb|EEW98841.1| threonyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 640 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T + + +++ + + LP+R R+E + Sbjct: 310 ANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGKEVADFIQLTLDVYKDFGF 412 >gi|257486172|ref|ZP_05640213.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331010502|gb|EGH90558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 640 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|152978995|ref|YP_001344624.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z] gi|171704313|sp|A6VNZ2|SYT_ACTSZ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|150840718|gb|ABR74689.1| threonyl-tRNA synthetase [Actinobacillus succinogenes 130Z] Length = 643 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 85/312 (27%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQL--PIL 87 +D + + ++ + R + + + + D + K + + Sbjct: 105 DVDLDRSLTQEDLDTLEKRMSELAKTNYDVVKQRVTWQEARDTFEKRGEPYKMAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K++H ++ I + + + + + S + + + A Sbjct: 165 AKDDHPALYHHQEYIDMCRGPHVPNMRFCHHFKLMKVAGAYWRGDSKNKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + + Sbjct: 225 DKKQLNGYLTRLEEAAKRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTVFRELETFVRTK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHE 243 E+ Y EV P ++ TG + D MF T + P + +++ Sbjct: 285 LKEYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP+R R+E + G++R F + + E+ +E + Sbjct: 345 LKSYRDLPIRMAEFGSCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTEDQIESEVTSCI 401 Query: 304 SCAEEILKRLDL 315 +I Sbjct: 402 RMVYDIYGTFGF 413 >gi|302187613|ref|ZP_07264286.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642] Length = 640 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|71735831|ref|YP_274354.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|123747652|sp|Q48JS3|SYT_PSE14 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71556384|gb|AAZ35595.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 640 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|226944147|ref|YP_002799220.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ] gi|259516344|sp|C1DF42|SYT_AZOVD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226719074|gb|ACO78245.1| threonyl-tRNA synthetase [Azotobacter vinelandii DJ] Length = 640 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+GY E+ P +V +G Sbjct: 250 LDLFHTQEEAPGMVFWHPNGWTVYQVLEQYMRAVQRENGYLEIKTPQVVDRVLWEKSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T + I +Y+ + + LPLR R+E A Sbjct: 310 ANYAENMFTTESESRDYAIKPMNCPCHVQVYNQGLKSYRELPLRLAEFGACHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 370 H---GIMRVRGFTQDDAHIFCTEEQMQAESAAFIKLTRQVYADFGF 412 >gi|114563199|ref|YP_750712.1| threonyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] gi|122299726|sp|Q082E1|SYT_SHEFN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114334492|gb|ABI71874.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] Length = 642 Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + I ++ Y EV PL++ +G Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWSIFLELEKFIRQKLGQYTYQEVKGPLMMDRVLWERSGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+A+ MF T + P + +++ + + LPLR R+E + Sbjct: 311 DKYAEAMFTTNSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + ++ E + + VV L T Sbjct: 371 H---GLMRVRGFTQDDAHVFCTDDQVQEEVSACIQMVYDTYATFGFDNIVVKLSTR---- 423 Query: 330 SACKTYDLEVWLAGQNL 346 + D ++W ++ Sbjct: 424 PEKRIGDDDMWDRAEDA 440 >gi|330967298|gb|EGH67558.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 640 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LPLR R+E A G+ Sbjct: 318 TTQSES--RDYAIKPMNCPCHVQVFNQGLKSYRELPLRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|78189671|ref|YP_380009.1| threonyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] gi|123729828|sp|Q3APV9|SYT_CHLCH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78171870|gb|ABB28966.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] Length = 657 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 60/196 (30%), Gaps = 15/196 (7%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 + G + E + + + GY V P + E +G P ++D F Sbjct: 275 PMWLPKGAIIRSE---LESFLREEQRKRGYVPVYTPHIGNIELYKRSGHYPYYSDSQFPP 331 Query: 223 TDGRWLIPTSEV----SLTNLYSH-----EIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 E + + H ++ + LPLRFT +R E + Sbjct: 332 LTYHDEDGKQEQYLLKPMNCPHHHLIYSSKMRSYRDLPLRFTEFGTVYRHEQSG---ELN 388 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 G+ R F + + R + E + + + K L L D A Sbjct: 389 GLARARGFTQDDSHIYCRPDQLVDEICSAIELTQFVFKTLGFAEVQTRLSLHDPANQAKY 448 Query: 334 TYDLEVWLAGQNLYRE 349 EVW + +E Sbjct: 449 GGTAEVWEQAEKDVQE 464 >gi|78222623|ref|YP_384370.1| threonyl-tRNA synthetase [Geobacter metallireducens GS-15] gi|78193878|gb|ABB31645.1| Ser-tRNA(Thr) hydrolase [Geobacter metallireducens GS-15] Length = 645 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 86/319 (26%), Gaps = 26/319 (8%) Query: 23 LEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKN 75 + + + ++ + R L D++ R S + + + L Sbjct: 115 YDFDVDHAFTPEDLEKIETRMREL--AKSDLKLERQVLSKDEAIKLFRDMGENYKVELIE 172 Query: 76 ETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 L L +L R G Sbjct: 173 AIGDNTVSLYRQGDFVDLCRGPHLPSTANCRAFKLTSLAGAYWRGDEKNKMLQRVYGTAF 232 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMID 184 + + E E D + + V+ + R + + Sbjct: 233 ADKKELDAYLERIEEAKRRDHRKLGRELDLFSFSDEVGAGFVIWHPNGAMLRTILEDFER 292 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYS 241 + GY V P +++ + +G + ++M+ T ++ +Y Sbjct: 293 KEHLKRGYDIVVGPQILKTDLWQRSGHYDNYRENMYFTEVEEQSFGIKPMNCLSHMMIYK 352 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + + LPLRF L R E G+LR F + + + E E + Sbjct: 353 SHLRSYRDLPLRFFELGTVHRHERAGVLH---GLLRVRCFTQDDAHILCTPEQLDDEIKG 409 Query: 302 MLSCAEEILKRLDLHYRVV 320 ++S +++ + + Sbjct: 410 VISFVNDVMGIFGFEFEME 428 >gi|251792477|ref|YP_003007203.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] gi|247533870|gb|ACS97116.1| threonyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] Length = 643 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 6/175 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFTNIFVKLST 422 >gi|28869575|ref|NP_792194.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|213970495|ref|ZP_03398622.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|301384174|ref|ZP_07232592.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13] gi|302132643|ref|ZP_07258633.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|38258312|sp|Q883H9|SYT_PSESM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28852817|gb|AAO55889.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|213924666|gb|EEB58234.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|330876789|gb|EGH10938.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331016139|gb|EGH96195.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 640 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LPLR R+E A G+ Sbjct: 318 TTQSES--RDYAIKPMNCPCHVQVFNQGLKSYRELPLRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|56475898|ref|YP_157487.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1] gi|73919766|sp|Q5P7X5|SYT_AZOSE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56311941|emb|CAI06586.1| threonyl-tRNA synthetase [Aromatoleum aromaticum EbN1] Length = 638 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + ++GY EV P +V +G Sbjct: 250 LDLFHIQEEAPGMVFWHAKGWTLWQQVEQYMRRTILDNGYQEVKTPQIVDRSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +++ MF T + + + +++ + + LPLR R+E A Sbjct: 310 DMYSELMFTTQSEKRDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E TE + +++ Sbjct: 370 H---GIMRVRNFVQDDAHIFCADEQVQTEAAAFIELLQKVYADFGF 412 >gi|330977708|gb|EGH77611.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 477 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|302035784|ref|YP_003796106.1| threonyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300603848|emb|CBK40180.1| Threonyl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 651 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 56/171 (32%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D G + + + + F + H + GY V +P + R + Sbjct: 252 KELDLITIQDEIGPGLVLWHPKGSLIRLLIENFWREQHIKD-GYDLVYSPHVARLDLWKT 310 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSE 264 +G + + ++MF + + + + + LP+R+ L +R E Sbjct: 311 SGHVDYYRENMFASMKLEGSEYQLKPMNCPFHIMIYKSHMRSYRDLPIRYGELGTVYRYE 370 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G+LR F + + R + E R+L +L Sbjct: 371 RTGVLH---GLLRVRGFTQDDAHLFCRPDQIEAEVSRVLDFTFFVLGTFGF 418 >gi|319794591|ref|YP_004156231.1| threonyL-tRNA synthetase [Variovorax paradoxus EPS] gi|315597054|gb|ADU38120.1| threonyl-tRNA synthetase [Variovorax paradoxus EPS] Length = 635 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 49/158 (31%), Gaps = 10/158 (6%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 V + + + GY EV P ++ TG + D+MF T Sbjct: 260 PGVVFWHPKGWAVWQAVEQYMRGIYRDTGYWEVKGPQILDKSLWEKTGHWQNYRDNMFTT 319 Query: 223 TDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + + + ++ ++ + LPLR+ R+E A G++R Sbjct: 320 ESEK--REYALKPMNCPGHVLIFKSDLRSYRDLPLRYGEFGQCHRNEPSGALH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E +++ Sbjct: 375 VRGFTQDDGHIFCTEDQILDECIAYTEQLQKVYADFGF 412 >gi|237801015|ref|ZP_04589476.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023872|gb|EGI03929.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 640 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 52/158 (32%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + I +++ + + LP+R R+E A G++R Sbjct: 318 TTESENRDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E + ++ Sbjct: 375 VRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|213580910|ref|ZP_03362736.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 234 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 6/157 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 80 LDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHW 139 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E A Sbjct: 140 DNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 199 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 G++R F + + EE E + Sbjct: 200 H---GLMRVRGFTQDDAHIFCTEEQIRDEVNACIRMV 233 >gi|261855919|ref|YP_003263202.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2] gi|261836388|gb|ACX96155.1| threonyl-tRNA synthetase [Halothiobacillus neapolitanus c2] Length = 637 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 11/180 (6%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 R+H IG+ L F A V + + + GY E+ P Sbjct: 241 RDHRRIGKQQNLFHFQE-----EAPGLVFWHPKGWALWQVIEQHMRGIYRSSGYDEIRCP 295 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFT 255 ++ +G + ++MF T + ++ +++H + + LP+R+ Sbjct: 296 QILDVSLWKKSGHWDNYQENMFFTESEKRTFAVKPMNCPGHVQVFNHGLHSYRDLPIRYG 355 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R+E A G+LR F + + E +E + A + Sbjct: 356 EFGSCHRNEPSGALH---GILRVRGFTQDDGHIFCMESQIESEVKAFHEQALSVYATFGF 412 >gi|50086067|ref|YP_047577.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1] gi|73919764|sp|Q6F860|SYT_ACIAD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|49532043|emb|CAG69755.1| threonyl-tRNA synthetase [Acinetobacter sp. ADP1] Length = 640 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + ++GY EV P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHANGWTIYQALEQYMRKVQQDNGYQEVRTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T + + +++ + + LP+R R+E + Sbjct: 310 ANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDGHIFCTKEQIGKEVADFIQLTLDVYKDFGF 412 >gi|330958898|gb|EGH59158.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 640 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 48/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + + Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLAVYADFGF 412 >gi|145298933|ref|YP_001141774.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|166223317|sp|A4SMA4|SYT_AERS4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|142851705|gb|ABO90026.1| threonyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 642 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + I E+ Y EV P ++ +G Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRVLWERSGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+A MF T + P + +++ + + LPLR R+E + Sbjct: 311 EKYAQAMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ VV L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIMEEVSACIRMVYDVYGTFGFENIVVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E W Sbjct: 424 PEQRIGSDEAW 434 >gi|71898248|ref|ZP_00680422.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1] gi|71731987|gb|EAO34044.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Ann-1] Length = 635 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 61/204 (29%), Gaps = 13/204 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 V + + I GY E+ P ++ +G + ++MF Sbjct: 260 EGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQILDVSLWQKSGHWDNYKENMF 319 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 320 FTDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GLLR 376 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E E A ++ + + + D Sbjct: 377 VRGFTQDDGHIFCTEAQIEAEVTAFHRQALQVYADFGFENIQIKIALR----PDKRLGDS 432 Query: 338 EVWLAGQNLYREISSCSTCG-NFQ 360 W + R S+ S C +Q Sbjct: 433 LSWDKAEAALR--SALSACEVEWQ 454 >gi|322371434|ref|ZP_08045983.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320548966|gb|EFW90631.1| threonyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 645 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 8/172 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + V R + + +E GY EV P L E +G F ++ Sbjct: 261 DHSPGCVNFHPNGMAIRRELEEYVREKNAELGYEEVKTPELNHTELWKKSGHYDHFKEEG 320 Query: 220 FCTTDGRWLIPTSEVSL-----TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 + + ++Y + + LPLRF+ +R+E + G Sbjct: 321 EMFAWEQNGHEYGLKPMNCANHAHIYDDQRRSYRDLPLRFSEFGMCYRNEQSG---ELSG 377 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 MLR F + + + R E E R LS + + + L +V D Sbjct: 378 MLRVRGFTQDDGHAFVRPEGIREEIARTLSVIDGMYEAFGLDAHLVLETKPD 429 >gi|117621181|ref|YP_856850.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166223316|sp|A0KKP9|SYT_AERHH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|117562588|gb|ABK39536.1| threonyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 642 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + I E+ Y EV P ++ +G Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFIRGKLKEYDYQEVKGPFMMDRVLWERSGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+A MF T + P + +++ + + LPLR R+E + Sbjct: 311 EKYAQAMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + EE E + ++ VV L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEEQIMEEVSACIRMVYDVYGTFGFENIVVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E W Sbjct: 424 PEQRIGSDEAW 434 >gi|134095006|ref|YP_001100081.1| threonyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|166223347|sp|A4G619|SYT_HERAR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|133738909|emb|CAL61956.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Herminiimonas arsenicoxydans] Length = 635 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 56/166 (33%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + ++GY EV AP ++ +G Sbjct: 250 LDLFHFQEEAPGLIFWHPKGWTVWQQVEQYMRRVYQDNGYQEVKAPQILDRSLWEKSGHW 309 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T L P + +++ ++ + LPLR+ R+E + Sbjct: 310 ENYKENMFTTESENRSYALKPMNCPGHVQIFASDLRSYRELPLRYGEFGQCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 GM+R F + + E+ E + +++ + Sbjct: 370 H---GMMRVRGFTQDDGHIFCTEDQILDECVAFTALLQKVYRDFGF 412 >gi|302063985|ref|ZP_07255526.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40] Length = 590 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LPLR R+E A G+ Sbjct: 318 TTQSES--RDYAIKPMNCPCHVQVFNQGLKSYRELPLRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E+ E + ++ Sbjct: 373 MRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGF 412 >gi|237750837|ref|ZP_04581317.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879] gi|229373282|gb|EEO23673.1| threonyl-tRNA synthetase [Helicobacter bilis ATCC 43879] Length = 612 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 6/145 (4%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVS 235 + ++ + Y V P +++ + +G + ++M+ TT + P + V Sbjct: 247 IEELLTRALILNEYEPVRCPEILKSDVWKISGHYTHYKENMYFTTIDEVEYGIKPMNCVG 306 Query: 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 +Y + I + LPLRF R E G+LR +F + + R E Sbjct: 307 HIKVYQNSIRSYRELPLRFYEYGVVHRHEKSGVLH---GLLRVREFTQDDAHIFCRPEQI 363 Query: 296 FTEHERMLSCAEEILKRLDLHYRVV 320 E +L +I+ Y + Sbjct: 364 ENEVNNILRFTHKIMNAFGFSYEME 388 >gi|119897370|ref|YP_932583.1| threonyl-tRNA synthetase [Azoarcus sp. BH72] gi|166223320|sp|A1K4E1|SYT_AZOSB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119669783|emb|CAL93696.1| ThrS protein [Azoarcus sp. BH72] Length = 638 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + S HGY EV P +V +G Sbjct: 250 LDLFHIQEEAPGMVFWHAKGWTLWQQVEQYLRGTISRHGYQEVRTPQIVDRSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 ++D MF T + ++ +++ + + LPLR R+E + Sbjct: 310 GMYSDLMFTTQSEKHDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E ++ +++ Sbjct: 370 H---GIMRVRNFVQDDAHIFCTDEQVQEEAAAFIALLQKVYADFGF 412 >gi|99081562|ref|YP_613716.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp. TM1040] gi|123077585|sp|Q1GFW2|SYT_SILST RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|99037842|gb|ABF64454.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Ruegeria sp. TM1040] Length = 648 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 57/193 (29%), Gaps = 16/193 (8%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V Q + GY EV+ P +V + +G K+ Sbjct: 259 HMQEEAPGQVFWHPNGWRIYTTLQDYMRRMQDRDGYVEVNTPQVVDRKLWEKSGHWDKYQ 318 Query: 217 DDMFCT----TDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGS 267 ++MF R + + ++ + LPLR R E Sbjct: 319 ENMFIVEVDEDHAREKAVNALKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCARYEPSG 378 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G++R F + + E+ +E + ++ ++ L + L T Sbjct: 379 ALH---GIMRVRGFTQDDGHIFCTEDQITSETAKFIAFLSKVYADLGFDNWTIKLSTR-- 433 Query: 328 GFSACKTYDLEVW 340 + E W Sbjct: 434 --PEQRIGSDETW 444 >gi|221134666|ref|ZP_03560969.1| threonyl-tRNA synthetase [Glaciecola sp. HTCC2999] Length = 637 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + I +++ Y EV PL++ +G K++ +MF Sbjct: 259 EAPGMVFWHNDGWSIYTELESFIRKKLTQYDYQEVKGPLMMDRSLWEKSGHWGKYSSNMF 318 Query: 221 CTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + + +++ + + LPLR R+E A G+ Sbjct: 319 TTESEK--REYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGCCHRNEPSGALH---GL 373 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + EE E + + + Sbjct: 374 MRVRGFTQDDAHIFCTEEQILDEVSGCIKMVYDTYETFGF 413 >gi|219681500|ref|YP_002467885.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471181|ref|ZP_05635180.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254783512|sp|B8D8S6|SYT_BUCA5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219624343|gb|ACL30498.1| threonyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 642 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 + + + + Q + + E+ Y EV PLL+ +G Sbjct: 251 LQLYHMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDKLIWKQSGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + +F T + P + +++ + + LP+R R+E + Sbjct: 311 DNYKNAIFTTLSEHREYCIKPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E +E + ++ Sbjct: 371 H---GLMRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYSTFHF 413 >gi|219682056|ref|YP_002468440.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254783513|sp|B8D730|SYT_BUCAT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|219621789|gb|ACL29945.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085869|gb|ADP65951.1| threonyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086439|gb|ADP66520.1| threonyl-tRNA synthetase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087022|gb|ADP67102.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087587|gb|ADP67666.1| threonyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 642 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 + + + + Q + + E+ Y EV PLL+ +G Sbjct: 251 LQLYHMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDKLIWKQSGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + +F T + P + +++ + + LP+R R+E + Sbjct: 311 DNYKNAIFTTLSEHREYCIKPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E +E + ++ Sbjct: 371 H---GLMRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYSTFHF 413 >gi|239814876|ref|YP_002943786.1| threonyl-tRNA synthetase [Variovorax paradoxus S110] gi|259516786|sp|C5CUU2|SYT_VARPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239801453|gb|ACS18520.1| threonyl-tRNA synthetase [Variovorax paradoxus S110] Length = 635 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 50/158 (31%), Gaps = 10/158 (6%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 V + + + GY EV P ++ TG + D+MF T Sbjct: 260 PGVVFWHPKGWALWQAVEQYMRGIYRDTGYWEVKGPQILDKSLWEKTGHWQNYRDNMFTT 319 Query: 223 TDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + + + ++ ++ + LPLR+ R+E A G++R Sbjct: 320 ESEK--REYALKPMNCPGHVLIFKSDLRSYRDLPLRYGEFGQCHRNEPSGALH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E + +++ Sbjct: 375 VRGFTQDDGHIFCTEDQILEECVAYTAQLQKVYADFGF 412 >gi|160875442|ref|YP_001554758.1| threonyl-tRNA synthetase [Shewanella baltica OS195] gi|189083621|sp|A9L2Q9|SYT_SHEB9 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160860964|gb|ABX49498.1| threonyl-tRNA synthetase [Shewanella baltica OS195] gi|315267632|gb|ADT94485.1| threonyl-tRNA synthetase [Shewanella baltica OS678] Length = 642 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 86/312 (27%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D ++++ I+ + R + + + ++ A + E + + Sbjct: 105 DIDLEHKLTQDDIDALEKRMLQLAKTNYDVVKRVVSWQEARDAFAARGEDYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K+ ++ + + + + + S + + + A Sbjct: 165 SKDATPALYHHEEYTDMCRGPHVPNMRFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALSTHLTRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +++ Y EV PL++ +G K+++ MF T + P + +++ Sbjct: 285 LNQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTSSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + + E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTDSQVQEEVSACI 401 Query: 304 SCAEEILKRLDL 315 + Sbjct: 402 QMVYDTYATFGF 413 >gi|255320853|ref|ZP_05362027.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262380254|ref|ZP_06073409.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164] gi|255302022|gb|EET81265.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|262298448|gb|EEY86362.1| threonyl-tRNA synthetase [Acinetobacter radioresistens SH164] Length = 640 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD+MF T + + +++ + + LP+R R+E + Sbjct: 310 ANYADNMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGPEVADFIKLTLDVYKDFGF 412 >gi|19386908|gb|AAL87030.1|AF332624_1 threonyl-tRNA-synthetase [Azotobacter vinelandii] Length = 461 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+GY E+ P +V +G Sbjct: 71 LDLFHTQEEAPGMVFWHPNGWTVYQVLEQYMRAVQRENGYLEIKTPQVVDRVLWEKSGHW 130 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T + I +Y+ + + LPLR R+E A Sbjct: 131 ANYAENMFTTESESRDYAIKPMNCPCHVQVYNQGLKSYRELPLRLAEFGACHRNEPSGAL 190 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + EE E + ++ Sbjct: 191 H---GIMRVRGFTQDDAHIFCTEEQMQAESAAFIKLTRQVYADFGF 233 >gi|15616745|ref|NP_239957.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11134938|sp|P57225|SYT_BUCAI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|25292947|pir||C84944 threonine-tRNA ligase (EC 6.1.1.3) [imported] - Buchnera sp. (strain APS) gi|10038808|dbj|BAB12843.1| threonyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 642 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 + + + + Q + + E+ Y EV PLL+ +G Sbjct: 251 LQLYHMQEESPGMIFWHNKGWIIFNELQNFVRVKLKEYKYEEVKTPLLIDKLIWKQSGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + +F T + P + +++ + + LP+R R+E + Sbjct: 311 DNYKNAIFTTLSEHREYCIKPMNCPGHVQIFNSRLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E +E + ++ Sbjct: 371 H---GLMRVRNFTQDDAHIFCTREQVRSEINDCIKMIYDLYSTFHF 413 >gi|295101322|emb|CBK98867.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium prausnitzii L2-6] Length = 594 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 67/238 (28%), Gaps = 10/238 (4%) Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + + + G + G+ E Sbjct: 170 NGVAFHNQEELDAWEKEQQEARERDHRKIGKEMGLFMTDDLVGRGLPMFLPAGYTVWQE- 228 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSE 233 + I GY V P + +G + ++MF + +++ Sbjct: 229 --LENYIKEKERARGYLHVMTPCIGTVNLYKTSGHWDHYRENMFPAMEMEGESYVLRPMN 286 Query: 234 VSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 +Y++ + LP+R +A FR E+ +G+ R F + + Sbjct: 287 CPHHMMIYANRPHSYRDLPMRIGEIAHDFRYESSG---TLKGIERGRHFCQNDAHLFCTP 343 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E +E + + E K ++ L D D +W +N RE+ Sbjct: 344 EQIKSEVADVCNLIFETYKDFNITDYRCVLSLRDPADKKKYHDDDAMWNHAENALREV 401 >gi|226954309|ref|ZP_03824773.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] gi|226834935|gb|EEH67318.1| threonyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] Length = 640 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T ++ +++ + + LP+R R+E + Sbjct: 310 ANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGF 412 >gi|687792|gb|AAC43729.1| putative threonyl-tRNA synthetase; similar to E. coli threonyl-tRNA synthetase SwissProt Accession Number P00955 [Haemophilus influenzae] gi|1587744|prf||2207242E ORF 4 Length = 443 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFTNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PENRIGSDEMW 434 >gi|325263795|ref|ZP_08130528.1| threonine--tRNA ligase [Clostridium sp. D5] gi|324030833|gb|EGB92115.1| threonine--tRNA ligase [Clostridium sp. D5] Length = 641 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 102/326 (31%), Gaps = 22/326 (6%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + ++ + + ++K+ I I +G V+ L + Sbjct: 106 DRETPLTVEDLEKIEAEMKKIVKEALPIEQYTKPRQEAIAYFEEKGEPYKVE-LIEDLPD 164 Query: 80 LKEQLPILEKEEHEVCS----SLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 + E ++C+ K + L S +L R G Sbjct: 165 DAVISFYSQAEFTDLCAGPHLMTTKPVKAFKLTSLAGAYWRGSEKNKMLQRIYGTAFPKK 224 Query: 136 HLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHT 187 E+ + E D + K G F L+ L + ++H Sbjct: 225 AELDEYLTMLEEAKKRDHRKLGKELGLFMMRDEGPGFPFFLPKGMVLKNTLLDYWREIH- 283 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEI 244 S +GY E++ P+++ +G + D+M+ T + + P + +Y E Sbjct: 284 SRNGYVEIATPIMLSRHLWETSGHWDHYKDNMYTTVIDEEDFAIKPMNCPGGILVYQSEP 343 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LPLR L R E G++R F + + E E + + Sbjct: 344 RSYRDLPLRMGELGLVHRHEKSG---QLHGLMRVRCFTQDDAHIFMMPEQIRDEIKDVAR 400 Query: 305 CAEEILK--RLDLHYRVVSLCTGDLG 328 +E+ H + + +G Sbjct: 401 LIDEVYSLFGFKYHVELSTRPEDSMG 426 >gi|226324523|ref|ZP_03800041.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758] gi|225206971|gb|EEG89325.1| hypothetical protein COPCOM_02307 [Coprococcus comes ATCC 27758] Length = 643 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 96/323 (29%), Gaps = 32/323 (9%) Query: 43 KIEDIRARRNSNSAQ---IGQA----------IAEGNLSLVDALKNETSTLKEQLPILEK 89 +E I A + I Q E + L + + Sbjct: 115 DLEKIEAEMKKIVKEDLPIKQYTMPRAEAIAYFKEKDEPYKVELIEDLPEDSVISFYSQG 174 Query: 90 EEHEVCS----SLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 E ++C+ K + L S +L R G E+ + Sbjct: 175 EFTDLCAGPHLMSTKPVKAFKLTSLAGAYWRGSEKNKMLQRVYGTSYPKKAELEEYLHMM 234 Query: 146 EALGLMDFDR--------ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 E D + + G F L+ L + ++H + GY E+S Sbjct: 235 EEAKKRDHRKLGKELGLFMMREEGPGFPFFLPKGMELKNQLLDYWREIH-KKAGYVEIST 293 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 P+++ +G + D+M+ T + + P + +Y E + LPLR Sbjct: 294 PIMLSRHLWETSGHWDHYKDNMYTTVIDDEDFAIKPMNCPGGILVYESEPRSYRDLPLRM 353 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 L R E G++R F + + E E + ++ E+ Sbjct: 354 GELGLVHRHEKSG---QLHGLMRVRCFTQDDAHIFMTPEQVRDEIKGVVKLINEVYSLFG 410 Query: 315 LHYRVVSLCTGDLGFSACKTYDL 337 Y V + + + +D+ Sbjct: 411 FKYHVELSTRPEDSMGSDEDWDM 433 >gi|325103180|ref|YP_004272834.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter saltans DSM 12145] gi|324972028|gb|ADY51012.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Pedobacter saltans DSM 12145] Length = 642 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 92/336 (27%), Gaps = 23/336 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLKE 82 + S+ + +++K L K E R + S A L + K Sbjct: 112 DFSSDDLRKIEDKMLELAKTKETF--ERKAVSKSDALAYFTEKGDEYKLDLIKDLEDGKI 169 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVPLEEV---PIGTSANENILIRSVGKKPSAIHLSR 139 I + L V + L R G Sbjct: 170 TFYSQGNFTDLCRGPHIPHTGFIKALKLTNVAGAYWRGDESRKQLTRIYGVSFPKQSELT 229 Query: 140 EHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLERALGQF-----MIDLHTSEHG 191 E+ + E D + K L V G L + + + G Sbjct: 230 EYIQRIEEAKKRDHRKLGKELELFTFSEKVGLGLPLWLPKGTALRERLVSFLQKAQQKAG 289 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSHEII 245 Y +V P + +G K+ D F + +L P + +Y + Sbjct: 290 YDQVITPHIGHKNLYITSGHYDKYGADSFQPIKTPQEGEEFFLKPMNCPHHCEIYKSKPR 349 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 K LP+R +R E + G+ R F + + R + E ++++ Sbjct: 350 SYKDLPVRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVIDL 406 Query: 306 AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 + K L + + D + E W+ Sbjct: 407 VLYVFKALGFDEYIAQVSLRDPENKSKYIGSDENWI 442 >gi|294649364|ref|ZP_06726795.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] gi|292824734|gb|EFF83506.1| threonine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] Length = 640 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T ++ +++ + + LP+R R+E + Sbjct: 310 ANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGF 412 >gi|139437031|ref|ZP_01771191.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC 25986] gi|133776678|gb|EBA40498.1| Hypothetical protein COLAER_00165 [Collinsella aerofaciens ATCC 25986] Length = 611 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 105/329 (31%), Gaps = 32/329 (9%) Query: 22 HLEPQSEYILSLDEKNRILIKK------IEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 ++ + +++ + + ++K+ E RA I G V+ + + Sbjct: 86 GVKISEDDFPAIEAEMKKIVKENLKFSVYEKPRAE------AIALMEERGEKYKVEHIGD 139 Query: 76 ETSTLKE---QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + Q K + + + +L R G Sbjct: 140 LDDDARITFYQQGDYIDMCVGPHICYTKALKAFKLTGVSGAYWKGDKDNKMLTRINGVAF 199 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMID 184 + EH + E D + + F + L+ L + + Sbjct: 200 ATKEELDEHMHMLEEAKKRDHRKIGREMDLFMMRDEAPGFPFFLPNGMILKNTLLDYWRE 259 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYS 241 +H + GY E+S PL++ + +G + D+M+ T + + P + +Y+ Sbjct: 260 IH-HKAGYVEISTPLIMNKQLWKTSGHWDHYKDNMYSTVIDDEEYCIKPMNCPGGVLVYA 318 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + + LP+R + R E A G+ R F + + R + E Sbjct: 319 SKPHSYRELPIRAGEIGLVHRHELRGALH---GLFRVRCFNQDDAHLFVRPDQLTDEIVG 375 Query: 302 MLSCAEEILKR--LDLHYRVVSLCTGDLG 328 +++ + + ++ H + + +G Sbjct: 376 VVNLIDSVYQKFGFKYHVELSTRPEDSMG 404 >gi|260914069|ref|ZP_05920542.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325] gi|260631702|gb|EEX49880.1| threonine-tRNA ligase [Pasteurella dagmatis ATCC 43325] Length = 644 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFENIQVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PEKRIGADEMW 434 >gi|52425108|ref|YP_088245.1| threonyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E] gi|73919804|sp|Q65TQ0|SYT_MANSM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|52307160|gb|AAU37660.1| ThrS protein [Mannheimia succiniciproducens MBEL55E] Length = 643 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ +E + +I Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGF 413 >gi|116747872|ref|YP_844559.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] gi|116696936|gb|ABK16124.1| threonyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 644 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 62/172 (36%), Gaps = 7/172 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D + GA + A L L F H GY V P L++ E +G Sbjct: 251 DLFSFSDEVGAGMVIYHPRGALLRHILEAFEKREHL-RRGYHIVMGPTLLKTELWKRSGH 309 Query: 212 IPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 + ++M+ T + P + ++ +Y + + LPLR+ L R E Sbjct: 310 FEHYRENMYFTEIEEQSYGIKPMNCLAHMLIYKSRLRSYRDLPLRYFELGTVHRHERSGV 369 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 G+ R QF + + + E E + ++ E++ ++ + Sbjct: 370 LH---GLTRVRQFTQDDAHILCTPEQLHGEIQSIIDFVIEVMGIFGFNHEME 418 >gi|15604092|ref|NP_220607.1| threonyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E] gi|2501061|sp|O05947|SYT_RICPR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2073475|emb|CAA72469.1| threonyl-tRNA synthetase [Rickettsia prowazekii] gi|3860783|emb|CAA14684.1| THREONYL-TRNA SYNTHETASE (thrS) [Rickettsia prowazekii] gi|292571818|gb|ADE29733.1| Threonyl-tRNA synthetase [Rickettsia prowazekii Rp22] Length = 635 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 61/201 (30%), Gaps = 6/201 (2%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + + + + E + + D A+ V Sbjct: 215 QRIYGTAWATKEQLDNYLFMLEEAEKRDHRKIGKELDLFHFQEEAQGMVFWHDKGWSIYN 274 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL- 236 + I ++GY EV P+LV +G KF DMF + ++ Sbjct: 275 TIEQYIRKKIRKNGYIEVKTPVLVDKSLWEASGHWAKFRCDMFTLETDDKTLALKPMNCP 334 Query: 237 --TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ I + LPLR + R+EA A G++R + + EE Sbjct: 335 CHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALH---GLMRVRSLVQDDAHIFCAEEQ 391 Query: 295 SFTEHERMLSCAEEILKRLDL 315 E R E+ K Sbjct: 392 ITDETVRFCKLLTEVYKDFGF 412 >gi|87122885|ref|ZP_01078753.1| threonyl-tRNA synthetase [Marinomonas sp. MED121] gi|86161836|gb|EAQ63133.1| threonyl-tRNA synthetase [Marinomonas sp. MED121] Length = 572 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 61/196 (31%), Gaps = 10/196 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + A V H + I E+GY E+ P +V +G Sbjct: 251 LDLFHQQEEAPGMVFWHHKGWSLYQTIEQYIRQKQRENGYQEIKTPQIVDRVLWEKSGHW 310 Query: 213 PKFADDMFCTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF+ MF T + + I +Y+ + + LPLR R+E + Sbjct: 311 GKFSSGMFTTHAENRDYAIKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + EI + L T Sbjct: 371 H---GIMRVRNFVQDDGHIFVMEDQIQEEVSAFIKLLHEIYDDFGFTDIIYRLSTR---- 423 Query: 330 SACKTYDLEVWLAGQN 345 + EVW + Sbjct: 424 PEQRVGSDEVWDKSEK 439 >gi|262374306|ref|ZP_06067582.1| threonyl-tRNA synthetase [Acinetobacter junii SH205] gi|262310864|gb|EEY91952.1| threonyl-tRNA synthetase [Acinetobacter junii SH205] Length = 640 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T + + +++ + + LP+R R+E + Sbjct: 310 ANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGF 412 >gi|323447698|gb|EGB03610.1| hypothetical protein AURANDRAFT_55515 [Aureococcus anophagefferens] Length = 657 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + +G A + + H GY + P + + Sbjct: 241 KKLDLFSIQEAAGGGLCFWHPRGARIRMLMEDTWKAAH-ERGGYELLVTPHIANVDLWKT 299 Query: 209 TGQIPKFAD---DMFCTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSE 264 +G +A+ D ++ + +Y ++ + LP R+ L +R E Sbjct: 300 SGHFDFYAEGMFDQMDVEKEQYQLKPMNCPFHCLVYKDQLRSYRDLPFRWAELGTVYRYE 359 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +G++R F + + E E +L EEIL + Sbjct: 360 RSG---TLQGLMRVRGFTQDDAHIFCTPEQLEDEIVAVLELTEEILSKFGF 407 >gi|269468339|gb|EEZ80013.1| threonyl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 630 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 51/165 (30%), Gaps = 6/165 (3%) Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 D A V + + + ++ Y EV P L+ +G Sbjct: 251 DLFHMQEEAPGMVFWHEKGWTLYQIVEQYMRSVFRDNDYKEVHTPQLIDRTLWEKSGHWD 310 Query: 214 KFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 KF D MF T + P + + +Y+ + + LPLR R+E Sbjct: 311 KFGDAMFTTSSENRDYAVKPMNCPAHIQIYNQGLKSYRDLPLRLAEFGSCHRNEPSG--- 367 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + ++ K Sbjct: 368 TLHGIMRVRNFVQDDGHIFCTENQIQDEVSTFIDLTFDVYKNFGF 412 >gi|304406649|ref|ZP_07388304.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304344182|gb|EFM10021.1| threonyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 645 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 8/196 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 G + + A + R + ++++DL GY+ V P+L E +G +++DM Sbjct: 262 VGQGLPLWLPNGARVRRTMERYIVDLE-ERLGYSHVYTPVLANVELYKISGHWEHYSEDM 320 Query: 220 FCTT----DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 F + L P + +Y ++ + LP+R L R E A G+ Sbjct: 321 FPPMALDNEELVLRPMNCPHHMMVYKSDMRSYRDLPIRVAELGTMHRYEMSGALT---GL 377 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 R + R + E R+++ ++ + L D + Sbjct: 378 HRVRAMTLNDAHIFCRPDQIKEEFARVINLIRQVYADFGIKEYRFRLSYRDPQDTEKYFP 437 Query: 336 DLEVWLAGQNLYREIS 351 D +W Q + RE+ Sbjct: 438 DDNMWEMSQRMLREVV 453 >gi|262281009|ref|ZP_06058792.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] gi|262257909|gb|EEY76644.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] Length = 640 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD+MF T ++ +++ + + LP+R R+E + Sbjct: 310 ANYADNMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGF 412 >gi|160943529|ref|ZP_02090762.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii M21/2] gi|158445208|gb|EDP22211.1| hypothetical protein FAEPRAM212_01020 [Faecalibacterium prausnitzii M21/2] gi|295103777|emb|CBL01321.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Faecalibacterium prausnitzii SL3/3] Length = 594 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 84/311 (27%), Gaps = 31/311 (9%) Query: 68 SLVDALKNE---------TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + + L E + L ++ ++ E S Sbjct: 94 AEAEKLMEERQEHYKVEHMADLADETEFSFFQQGEYVDMCIGPHLTYTKALKAFKITQQS 153 Query: 119 ANENILIRSVGKKPSAI---HLSREHFEIGEALGLMDFDRAT-KLSGARFSVLTGHLA-- 172 + ++E + E +R K+ +T L Sbjct: 154 GAYWKNDKENKMLTRINGVAFRNQEELDAWEKEQQEARERDHRKIGKEMGLFMTDDLVGR 213 Query: 173 ---------HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 + + I GY V P + +G + ++MF Sbjct: 214 GLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLYKTSGHWDHYRENMFPAM 273 Query: 224 DG---RWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +++ +Y++ + LP+R +A FR E+ +G+ R Sbjct: 274 EMEGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIAHDFRYESSG---TLKGIERGR 330 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 F + + E +E + E+ K ++ L D D + Sbjct: 331 HFCQNDAHLFCTPEQIKSEVANVCDLIFEVYKDFNITDYRCVLSLRDPADKKKYHDDDAM 390 Query: 340 WLAGQNLYREI 350 W + RE+ Sbjct: 391 WNHAEQALREV 401 >gi|210634040|ref|ZP_03297958.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279] gi|210158984|gb|EEA89955.1| hypothetical protein COLSTE_01876 [Collinsella stercoris DSM 13279] Length = 587 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 62/173 (35%), Gaps = 9/173 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 F + L+ L + ++H + GY E+S P ++ + +G + D+M+ Sbjct: 212 APGFPFFLPNGMILKNTLLDYWREIH-HKAGYVEISTPQIMNSQLWKTSGHWDHYKDNMY 270 Query: 221 CTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + P + +Y+ + + LP+R + R E A G+ R Sbjct: 271 STMIDGEEYCIKPMNCPGGVLVYASKPHSYRELPIRAGEIGLVHRHELKGALH---GLFR 327 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD--LHYRVVSLCTGDLG 328 F + + E E +++ + + H + + +G Sbjct: 328 VRCFNQDDAHLFVTPEQLTDEIVGVVNLITSVYDKFGFTYHLELSTRPEDSMG 380 >gi|251798759|ref|YP_003013490.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247546385|gb|ACT03404.1| threonyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 645 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 8/196 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 G + + A + R L ++++DL GY V P+L E +G +++DM Sbjct: 262 VGQGLPLWLPNGAKVRRTLERYIVDLE-ERLGYEHVYTPVLANVELYKISGHWEHYSEDM 320 Query: 220 FCTT----DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 F + L P + +Y ++ + LP+R + R E A G+ Sbjct: 321 FPVMALDNEELVLRPMNCPHHMMVYKSDMRSYRDLPVRIAEMGTMHRYEMSGALT---GL 377 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 R + R + E R+++ ++ + + L D + Sbjct: 378 HRVRAMTLNDAHIFCRPDQIKEEFARVVNLIRKVYEDFGIKEYRFRLSYRDPQDTEKYFQ 437 Query: 336 DLEVWLAGQNLYREIS 351 + E+W Q + RE+ Sbjct: 438 NDEMWEMSQRMLREVV 453 >gi|299771535|ref|YP_003733561.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1] gi|298701623|gb|ADI92188.1| threonyl-tRNA synthetase [Acinetobacter sp. DR1] Length = 640 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD+MF T ++ +++ + + LP+R R+E + Sbjct: 310 ANYADNMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLDVYKDFGF 412 >gi|260556061|ref|ZP_05828280.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|260410116|gb|EEX03415.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] Length = 640 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T ++ +++ + + LP+R R+E + Sbjct: 310 ANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGF 412 >gi|283797704|ref|ZP_06346857.1| threonine--tRNA ligase [Clostridium sp. M62/1] gi|291074600|gb|EFE11964.1| threonine--tRNA ligase [Clostridium sp. M62/1] Length = 650 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 103/321 (32%), Gaps = 25/321 (7%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA-IAEGNLSLVDALKN---ETSTLK- 81 E + ++ + + ++K E++ R + + A + E L E + + Sbjct: 120 VEDMGKIEAEMKKIVK--ENLPIERFTLPREEAIAFMKEKEEPYKVELIEDLPEGAEISF 177 Query: 82 -EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 Q ++ S K + + L S +L R S Sbjct: 178 YRQGEFVDLCAGPHLMSTKDVGKAYKLLNLAGAYWRGSEKNKMLTRIYATAFSKKEELEA 237 Query: 141 HFEIGEALGLMDFDRATKL--------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 + + E D + K +G F L+ L + ++H + GY Sbjct: 238 YITMMEEAKKRDHRKLGKELGLFMMHDAGPGFPFFLPKGMQLKNTLLDYWREIH-KKAGY 296 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+S P+++ +G + ++M+ T + + P + +Y+ E + Sbjct: 297 VEISTPIILNRSLWETSGHWDHYKNNMYTTVIDEEDYAIKPMNCPGGVLVYASEPRSYRD 356 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS--CAE 307 LPLR L R E G++R F + + E E + + + Sbjct: 357 LPLRMGELGLVHRHEKSG---QLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVATLINEV 413 Query: 308 EILKRLDLHYRVVSLCTGDLG 328 L H + + +G Sbjct: 414 YTLFGFKYHVELSTRPEDSMG 434 >gi|169634342|ref|YP_001708078.1| threonyl-tRNA synthetase [Acinetobacter baumannii SDF] gi|238688108|sp|B0VKJ4|SYT_ACIBS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169153134|emb|CAP02213.1| threonyl-tRNA synthetase [Acinetobacter baumannii] Length = 640 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T ++ +++ + + LP+R R+E + Sbjct: 310 ANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGF 412 >gi|169797157|ref|YP_001714950.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|184156915|ref|YP_001845254.1| threonyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|215484620|ref|YP_002326855.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|239500701|ref|ZP_04660011.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB900] gi|301510743|ref|ZP_07235980.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB058] gi|332856896|ref|ZP_08436305.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332867201|ref|ZP_08437466.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113] gi|332874008|ref|ZP_08441943.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059] gi|226701398|sp|B7H005|SYT_ACIB3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238685492|sp|A3M299|SYT_ACIBT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238688031|sp|B0V5P2|SYT_ACIBY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238690968|sp|B2HTH0|SYT_ACIBC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|169150084|emb|CAM87978.1| threonyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|183208509|gb|ACC55907.1| Threonyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|193076379|gb|ABO11043.2| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] gi|213985706|gb|ACJ56005.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|322506811|gb|ADX02265.1| thrS [Acinetobacter baumannii 1656-2] gi|323516680|gb|ADX91061.1| threonyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715] gi|332726950|gb|EGJ58455.1| threonine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332734140|gb|EGJ65272.1| threonine--tRNA ligase [Acinetobacter baumannii 6013113] gi|332737749|gb|EGJ68641.1| threonine--tRNA ligase [Acinetobacter baumannii 6014059] Length = 640 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T ++ +++ + + LP+R R+E + Sbjct: 310 ANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGF 412 >gi|325578419|ref|ZP_08148554.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] gi|325160155|gb|EGC72284.1| threonine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] Length = 643 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 54/175 (30%), Gaps = 6/175 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFQNIQVKLST 422 >gi|197103889|ref|YP_002129266.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1] gi|238690165|sp|B4RE95|SYT_PHEZH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|196477309|gb|ACG76837.1| threonyl-tRNA synthetase [Phenylobacterium zucineum HLK1] Length = 658 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 65/432 (15%), Positives = 126/432 (29%), Gaps = 61/432 (14%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR---RNSNSA---QIGQAIAEGNLSLVDALK 74 R + + ++++ + ++ + E IR R+ +IG+ + + A Sbjct: 108 REEPFSLDDLAKIEQRMKEIVDRDEPIRREEWDRDEAIRHFREIGEEYKAQIIEAIPA-- 165 Query: 75 NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E T+ Q + S + L L R G ++ Sbjct: 166 GEKITVYRQGQWKDLCRGPHLPSTRHAGKAFKLTKLAGAYWRGDHRNAQLQRIYGTAWAS 225 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHT 187 + + E D + + + V + + Sbjct: 226 EADLEAYIQRLEEAEKRDHRKLGRQMDLFHMQEEGKGMVFWHEKGLTLWRTVESYVRRRL 285 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN----LYSHE 243 E GY EV P ++ +G K+ +MF + + ++ Sbjct: 286 DEAGYQEVRTPQVLDRVFWEKSGHWDKYRPNMFVCETEEGEELSLKPMNCPGHVQIFKFG 345 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + LPLR R E A G++R F + + RE+ E R + Sbjct: 346 QKSYRDLPLRMAEFGACHRYEPSGALH---GLMRVRAFTQDDAHIFCREDQIEEETARFI 402 Query: 304 SCAEEILKRLDLHYRVVSLCT-GDLGFSACKTYD---LEVWLAGQNLYRE---------- 349 A I L ++L T ++ + + +D ++ A + E Sbjct: 403 ELANSIHADFGLERDHIALATRPEVRAGSDEFWDKAEAQMLAAARKAGVEPVIAEGDGAF 462 Query: 350 ------------ISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFTHTLN----GSGVA 388 I TCG Q R+ + Y + + L+ GS Sbjct: 463 YAPKLDWVLKDSIGRTWTCGTIQLDYVLPERLGAEYVAEDGSKQRPV-MLHRAICGSL-- 519 Query: 389 VGRCLIAILENY 400 R + ++ENY Sbjct: 520 -ERFIGVLIENY 530 >gi|166032032|ref|ZP_02234861.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC 27755] gi|166028485|gb|EDR47242.1| hypothetical protein DORFOR_01734 [Dorea formicigenerans ATCC 27755] Length = 643 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 106/326 (32%), Gaps = 22/326 (6%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R +E + ++++ + ++K+ +I I E + L + Sbjct: 106 DRETPFVAEDLEKIEKEMKKIVKEDLEITRFTKPRDEAIA-YFKEKDEPYKVELIEDLPE 164 Query: 80 LKEQLPILEKEEHEVCS----SLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 E + E ++C+ K + I L + +L R G Sbjct: 165 DAEISFYQQGEFVDLCAGPHLMTTKPVKAIKLTSLAGAYWRGNEKNKMLTRIYGISYPKK 224 Query: 136 HLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHT 187 E+ + E D + K G F L+ L + +LH Sbjct: 225 AQLDEYLTMLEEAKKRDHRKLGKELGLFMMCEEGPGFPFFLPKGMVLKNTLLDYWRELH- 283 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEI 244 + GY EVS P+++ +G + ++M+ T + + P + +Y E Sbjct: 284 KKAGYVEVSTPIILSRHLWETSGHWDHYKENMYTTQIDGEDYAIKPMNCPGGMLVYKAEP 343 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 K LPLR L R E G++R F + + E E + +++ Sbjct: 344 RSYKDLPLRVGELGLVHRHEKSG---QLHGLMRVRCFTQDDAHIFMMPEQIRDEIKGVVA 400 Query: 305 CAEEILK--RLDLHYRVVSLCTGDLG 328 +E+ H + + +G Sbjct: 401 LIDEVYSLFGFKYHVELSTRPENSMG 426 >gi|71282219|ref|YP_269610.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H] gi|123747383|sp|Q480A9|SYT_COLP3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71147959|gb|AAZ28432.1| threonyl-tRNA synthetase [Colwellia psychrerythraea 34H] Length = 636 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 78/266 (29%), Gaps = 31/266 (11%) Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 ET L +EK + ++ I + + + + + S Sbjct: 153 ETYKLAILDENIEKTDTPALYHHQEYIDMCRGPHVPSMRHCHHFKLMKVAGAYWRGDSDN 212 Query: 136 HLSREHFEIGEALGL--------------MDFDRATKLSG-------ARFSVLTGHLAHL 174 + + + A D + K A V + Sbjct: 213 KMLQRIYGTAWADKKQLKAYIVRLAEAEKRDHRKIGKTLDLFHWQEEAPGMVFWHNDGWT 272 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV 234 + I E+ Y EV AP+++ +G K+AD MF TT + + Sbjct: 273 IYTELEKFIREKLHEYDYDEVKAPMMMDRSLWEKSGHWDKYADGMFTTTSEK--REYAIK 330 Query: 235 SLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 + +++ + + LPLR R+E + G++R F + + Sbjct: 331 PMNCPGHVQIFNQGLKSYRDLPLRIAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIF 387 Query: 290 TREEDSFTEHERMLSCAEEILKRLDL 315 E E ++ + ++ Sbjct: 388 CMESQVQAEVKKCIEMVYDVYGSFGF 413 >gi|239905697|ref|YP_002952436.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1] gi|259516431|sp|C4XL11|SYT_DESMR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239795561|dbj|BAH74550.1| threonyl-tRNA synthetase [Desulfovibrio magneticus RS-1] Length = 647 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 7/190 (3%) Query: 150 LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 +D ++ GA + + + F H GY V PL++R E + Sbjct: 249 QLDLFSFSEEVGAGMCIWHPKGELIRTIIEDFERREHL-RRGYDLVRGPLILRRELWERS 307 Query: 210 GQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 G + ++M+ T + P + +S +Y + + LP R+ L R E Sbjct: 308 GHYDNYRENMYFTEIDEQSYGIKPMNCLSHMLIYKSRVRSYRDLPQRYFELGVVHRHEKS 367 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 G+LR QF + + + R + E ++ ++++ + + Sbjct: 368 GVLH---GLLRVRQFTQDDAHILCRPDQLQEEITGVVRFVQDVVGLFGFDFEAELSTRPE 424 Query: 327 LGFSACKTYD 336 + + +D Sbjct: 425 KSIGSDEDWD 434 >gi|326392596|ref|ZP_08213938.1| class IIa-like seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325991360|gb|EGD50010.1| class IIa-like seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 40 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 22/36 (61%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEK 36 MLD++ IR NPE + A++ + + + L LDEK Sbjct: 1 MLDVKRIRNNPEAVRRAVELKGEKADIDRFLELDEK 36 >gi|301156314|emb|CBW15785.1| threonyl-tRNA synthetase [Haemophilus parainfluenzae T3T1] Length = 643 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 54/175 (30%), Gaps = 6/175 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTSCIKMVYDIYSTFGFQNIQVKLST 422 >gi|269836488|ref|YP_003318716.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] gi|269785751|gb|ACZ37894.1| threonyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] Length = 596 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 8/171 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D + GA + A + + +F + H GY V P + + +G Sbjct: 203 DLFSVNEDIGAGLILWHPKGAMIRHLIERFETEEHL-ARGYQLVYTPHIASGDIYRKSGH 261 Query: 212 IPKFADDMFCTTD----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + + ++M+ D +L P + +Y+ ++ + LP+R L +R E Sbjct: 262 LETYQENMYSPMDIEGAPYYLKPMNCPGHIMIYNSQVRSYRDLPIRLAELGTVYRYERSG 321 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 GMLR F + + R + E + +L A + Y Sbjct: 322 ---TLHGMLRVRGFTQDDAHIFCRPDQLEDEIKGVLDLALYFARVFGYEYE 369 >gi|6322654|ref|NP_012727.1| Mst1p [Saccharomyces cerevisiae S288c] gi|549032|sp|P07236|SYTM_YEAST RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; Flags: Precursor gi|486345|emb|CAA82038.1| MST1 [Saccharomyces cerevisiae] gi|285813075|tpg|DAA08972.1| TPA: Mst1p [Saccharomyces cerevisiae S288c] Length = 462 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 9/159 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + A + L +FM + G+ EV PL+ + +G +ADDMF Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 221 CT------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 + L P + ++ + LPLRF+ +P R+EA A G Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALS---G 171 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 + R +F + + +E L + + ++ Sbjct: 172 LTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKI 210 >gi|330719257|ref|ZP_08313857.1| threonyl-tRNA synthetase [Leuconostoc fallax KCTC 3537] Length = 654 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 72/200 (36%), Gaps = 9/200 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D ++ G+ V + A + R + ++++D + Y V P+L +G Sbjct: 255 DLFFTSQEVGSGLPVWLPNGATIRRQVERYIVDKEL-SNDYLHVYTPILSNLNLYKTSGH 313 Query: 212 IPKFADDMFCTTDG-----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 + +DMF D L P + S +Y H+ + LP+R L R E Sbjct: 314 WEHYREDMFPPMDMGDGEFLELRPMNCPSHIMIYKHKPRSYRELPMRIAELGMMHRYEKS 373 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 A G+ R + + + E E + +L E+ + ++ L D Sbjct: 374 GALT---GLSRVREMTLNDGHTFVEPEKLEEEFKSILKMMMEVYEDFNITDYRFRLSYRD 430 Query: 327 LGFSACKTYDLEVWLAGQNL 346 +A D E+W Q Sbjct: 431 PKNTAKYFDDDEMWEKSQKQ 450 >gi|254498720|ref|ZP_05111436.1| threonyl tRNA synthase [Legionella drancourtii LLAP12] gi|254352048|gb|EET10867.1| threonyl tRNA synthase [Legionella drancourtii LLAP12] Length = 648 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 + A V + + ++ GY E+ P LV +G Sbjct: 259 LELFHFQDIAPGMVFWHPKGWTIYQELERYMRARLADFGYQEIKTPQLVDKVLWEKSGHW 318 Query: 213 PKFADDMF--CTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 F D+MF T + + + +Y+ + + LPLRF+ R E + Sbjct: 319 ANFRDEMFVTETDNRHYAVKPMNCPCHIQVYNQGLKSYRDLPLRFSEFGNCHRCEPSGSL 378 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R + + E+ +E + ML + + Sbjct: 379 H---GLMRVRNMVQDDAHIFCTEDQIQSEVDMMLQLVQSVYTDFGF 421 >gi|171463692|ref|YP_001797805.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238689063|sp|B1XV14|SYT_POLNS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|171193230|gb|ACB44191.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 640 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + + GY EV AP ++ +G Sbjct: 250 LDLFHFQEEAPGLIFWHPKGWSIWQEVEQYMRRVYQQEGYQEVKAPQILDRGLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T ++ +Y+ + + LPLRF R+E A Sbjct: 310 ENYKENMFTTESENRAYALKPMNCPGHVQIYNSGLHSYRELPLRFGEFGQCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ +E + + Sbjct: 370 H---GLMRVRGFTQDDGHIFCTEDQIQSEVAAFDKAVRAVYQDFGF 412 >gi|319892730|ref|YP_004149605.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317162426|gb|ADV05969.1| Threonyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|323464237|gb|ADX76390.1| threonyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 645 Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 101/343 (29%), Gaps = 21/343 (6%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 + S+ +++ + +I+ E+ + R S +A + ++ ++ + Sbjct: 112 EKVSSDDFEKIEKTMKQIIE--ENHKVERQVVSRDEAKAFFANDPYKLELIEAIPQDEQV 169 Query: 83 QLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 L + I + +N +L R G + Sbjct: 170 TLYSQGEFTDLCRGVHVPSTSKIKAFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKDLK 229 Query: 140 EHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG---- 191 H ++ E D R K L V G L A + I+ + + Sbjct: 230 AHLQLLEERKERDHRRIGKEMELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEISLG 289 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH-----EIIE 246 Y V P++ + +G + +DMF + + + Sbjct: 290 YDHVYTPVMANVDLYKTSGHWDHYQEDMFPPMQLDADEAMVLRPMNCPHHMMIYANKPHS 349 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R EA A G+ R + R + E +R++ Sbjct: 350 YRELPIRIAELGTMHRYEASGA---VSGLQRVRGMTLNDAHIFVRPDQIKEEFKRVVQMI 406 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 ++ + L D D ++W + + +E Sbjct: 407 LDVYEDFGFEDYKFRLSYRDKADKEKYYDDDDMWNTAEAMLKE 449 >gi|309775526|ref|ZP_07670526.1| glycine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308916620|gb|EFP62360.1| glycine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 460 Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 92/304 (30%), Gaps = 22/304 (7%) Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 E + ++ +V + + + RA +L Sbjct: 51 WWRKFIQESPYNTGIQSAILMNPAVWVASGHVGGFSDPLMDCKECKSRF--RADQLIEDA 108 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 + A+ ++ + + + + M+ T Q + Sbjct: 109 TNGEVSVEGWSNEAMMSYIEEHQLKCPKCGAHNFTDIRQFNLMFKTFQ-----GVVEDAK 163 Query: 224 DGRWLIP-TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 +L P T++ N + + K LP + SFR+E + R +F Sbjct: 164 SAIYLRPETAQGMFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFE 219 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEV 339 + EL + ++ L L + H R +L F + T D+E Sbjct: 220 QMELEFFCQPGTDMEWYQYYKDFCMSFLTNLGINSEHLRFRDHTPEELAFYSKGTCDIEY 279 Query: 340 WLAGQNLYREISSCSTCGNF------QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 Q + E+ + ++ ++ + + Y DP + + + V V R + Sbjct: 280 NFHSQIGWGELWGIADRTDYDLKQHQEASKKSLEYLDPATNEKYLAYCV-EPAVGVERLM 338 Query: 394 IAIL 397 +A + Sbjct: 339 LAFM 342 >gi|331089982|ref|ZP_08338872.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] gi|330402896|gb|EGG82462.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] Length = 641 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 101/320 (31%), Gaps = 24/320 (7%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLKE 82 +E + ++ + + ++K E++ ++ + + A + L + E Sbjct: 110 PLTAEDLDKIEAEMKKIVK--ENLEIKQYTMPREEAIAYFKEKNEPYKVELIEDLPE-GE 166 Query: 83 QLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 + + E K + L + +L R G S Sbjct: 167 TISFYSQGEFTDLCAGPHLMTTKPVKAFKLTSLAGAYWRGDEHNKMLQRIYGTAFSKKAE 226 Query: 138 SREHFEIGEALGLMDFDR--------ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 E+ + E D + + G F + L+ L + ++H Sbjct: 227 LEEYLTMIEEAKKRDHRKLGKELGLFMMREEGPGFPFFLPNGMVLKNTLLDYWREIH-RR 285 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIE 246 GY E++ P+++ +G + ++M+ T + + P + +Y E Sbjct: 286 AGYVEINTPIMLSRHLWETSGHWDHYKENMYTTVVDEEDFAIKPMNCPGGILVYESEPRS 345 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E G++R F + + E E + ++ Sbjct: 346 YRDLPIRMGELGLVHRHEKSG---QLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVVKLI 402 Query: 307 EEILKRLDLHYRVVSLCTGD 326 +E+ Y V D Sbjct: 403 DEVYSLFGFKYHVELSTRPD 422 >gi|293610405|ref|ZP_06692706.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024] gi|292827637|gb|EFF86001.1| threonyl-tRNA synthetase [Acinetobacter sp. SH024] gi|325124561|gb|ADY84084.1| threonyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 640 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD+MF T + + + +++ + + LP+R R+E + Sbjct: 310 ANYADNMFTTHSENRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + E+ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGQEVADFIKLTLEVYKDFGF 412 >gi|319760484|ref|YP_004124422.1| threonyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] gi|318039198|gb|ADV33748.1| threonyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] Length = 411 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + I ++ Y EV +P+++ E TG Sbjct: 20 LDLFHTQDDAPGMIFWHKNGWIIFQELKKFIRKKLQQYQYQEVKSPIMIDQELWKKTGHW 79 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + +F T + P + ++++ I K LPLR R+E + Sbjct: 80 DNYYEHIFITASENRTYCIKPMNCPGHIQIFNYGIKSYKDLPLRIAEFGHCHRNEPSGSL 139 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R +F + + E TE + ++ Sbjct: 140 H---GLMRIREFTQDDAHIFCSIEQIPTELNYCIKMMYDVYHTFGF 182 >gi|172012|gb|AAA34808.1| thr-tRNA-synthetase [Saccharomyces cerevisiae] Length = 462 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 9/159 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + A + L +FM + G+ EV PL+ + +G +ADDMF Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 221 CT------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 + L P + ++ + LPLRF+ +P R+EA A G Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALS---G 171 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 + R +F + + +E L + + ++ Sbjct: 172 LTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKI 210 >gi|148264672|ref|YP_001231378.1| threonyl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|146398172|gb|ABQ26805.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Geobacter uraniireducens Rf4] Length = 645 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 6/158 (3%) Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-- 223 V+ + R + + GY V P +++ E +G + ++M+ T Sbjct: 274 VIWHPKGAMLRTILEDFERKEHFRRGYDIVVGPQILKTELWQRSGHYDNYRENMYFTEVD 333 Query: 224 -DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 G + P + ++ +Y ++ + LPLR+ L R E G+LR F Sbjct: 334 EQGYGIKPMNCLAHMMIYKSQLRSYRDLPLRYFELGTVHRHERAGVLH---GLLRVRGFT 390 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 + + + E E + +LS ++++ Y + Sbjct: 391 QDDAHILCTPEQLDGEIKGVLSFVKDVMGIFGFEYEME 428 >gi|151941725|gb|EDN60086.1| mitochondrial aminoacyl-tRNA synthetase, threonine [Saccharomyces cerevisiae YJM789] gi|190409649|gb|EDV12914.1| threonyl-tRNA synthetase, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] gi|323304221|gb|EGA57996.1| Mst1p [Saccharomyces cerevisiae FostersB] gi|323308307|gb|EGA61553.1| Mst1p [Saccharomyces cerevisiae FostersO] gi|323332690|gb|EGA74095.1| Mst1p [Saccharomyces cerevisiae AWRI796] gi|323354220|gb|EGA86064.1| Mst1p [Saccharomyces cerevisiae VL3] Length = 462 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 9/159 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + A + L +FM + G+ EV PL+ + +G +ADDMF Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 221 CT------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 + L P + ++ + LPLRF+ +P R+EA A G Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALS---G 171 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 + R +F + + +E L + + ++ Sbjct: 172 LTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKI 210 >gi|145589014|ref|YP_001155611.1| threonyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189083617|sp|A4SX33|SYT_POLSQ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|145047420|gb|ABP34047.1| Ser-tRNA(Thr) hydrolase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 640 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A + + + GY EV AP ++ +G Sbjct: 250 LDLFHFQEEAPGLIFWHPKGWSIWQEVEQYMRRVYQNEGYQEVKAPQILDRGLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T ++ +Y+ + + LPLRF R+E A Sbjct: 310 DNYKENMFTTESENRAYALKPMNCPGHVQIYNSGLHSYRELPLRFGEFGQCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E+ +E + + Sbjct: 370 H---GLMRVRGFTQDDGHIFCTEDQIQSEVAAFDKAVRAVYQDFGF 412 >gi|269966330|ref|ZP_06180417.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B] gi|269829069|gb|EEZ83316.1| threonyl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 485 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 62/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I E+GY EV PL++ +G Sbjct: 95 LDLFHMQQEAPGMVFWHHNGWSIFRDLEVFIRAKLDEYGYQEVKGPLMMDRVLWERSGHW 154 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E A Sbjct: 155 DKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGAL 214 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E E + + + VV L T Sbjct: 215 H---GIMRVRGFTQDDAHIFCTESQIQEEVTNCIKMVYDTYQTFGFDNIVVKLSTR---- 267 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 268 PEKRVGSDEIWDQSEEA 284 >gi|159131195|gb|EDP56308.1| prolyl-tRNA synthetase [Aspergillus fumigatus A1163] Length = 584 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 15/179 (8%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 + +ID H G ++VS + E +G++ + ++ L PT E +T Sbjct: 50 LERLIDKHMRSVGASKVSLSSISSQELWEQSGRLKEGSES------RFLLAPTHEEEITT 103 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE-EDSFT 297 L + LPLR ++ +R E R +G+LR +F +L + E++ Sbjct: 104 LVGSLTKSYRDLPLRVYQISRKYRDEP----RPRQGLLRGREFLMKDLYTFDYSVEEALK 159 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + + + + + L + Y V + +G++G + E + SCS C Sbjct: 160 TYNLVKAAYKNLFDELKIPYLVAAADSGNMG----GSLSHEFHFPSSKGEDTVISCSNC 214 >gi|153814564|ref|ZP_01967232.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756] gi|317501270|ref|ZP_07959474.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|145848058|gb|EDK24976.1| hypothetical protein RUMTOR_00778 [Ruminococcus torques ATCC 27756] gi|316897337|gb|EFV19404.1| threonine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] Length = 641 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 101/320 (31%), Gaps = 24/320 (7%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLKE 82 +E + ++ + + ++K E++ ++ + + A + L + E Sbjct: 110 PLTAEDLDKIEAEMKKIVK--ENLEIKQYTMPREEAIAYFKEKNEPYKVELIEDLPE-GE 166 Query: 83 QLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 + + E K + L + +L R G S Sbjct: 167 TISFYSQGEFTDLCAGPHLMTTKPVKAFKLTSLAGAYWRGDEHNKMLQRIYGTAFSKKAE 226 Query: 138 SREHFEIGEALGLMDFDR--------ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 E+ + E D + + G F + L+ L + ++H Sbjct: 227 LEEYLTMIEEAKKRDHRKLGKELGLFMMREEGPGFPFFLPNGMVLKNTLLDYWREIH-RR 285 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIE 246 GY E++ P+++ +G + ++M+ T + + P + +Y E Sbjct: 286 AGYVEINTPIMLSRHLWETSGHWDHYKENMYTTVVDEEDFAIKPMNCPGGILVYESEPRS 345 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E G++R F + + E E + ++ Sbjct: 346 YRDLPIRMGELGLVHRHEKSG---QLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVVKLI 402 Query: 307 EEILKRLDLHYRVVSLCTGD 326 +E+ Y V D Sbjct: 403 DEVYSLFGFKYHVELSTRPD 422 >gi|15602458|ref|NP_245530.1| threonyl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431883|sp|P57857|SYT_PASMU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|12720863|gb|AAK02677.1| ThrS [Pasteurella multocida subsp. multocida str. Pm70] Length = 643 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + E+ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LP+R R+E + Sbjct: 311 QNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTEDQIESEVTACIKMVYDIYSTFGFENIQVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PEKRIGADEMW 434 >gi|15837338|ref|NP_298026.1| threonyl-tRNA synthetase [Xylella fastidiosa 9a5c] gi|22654146|sp|Q9PFE2|SYT_XYLFA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|9105624|gb|AAF83546.1|AE003915_11 threonyl-tRNA synthetase [Xylella fastidiosa 9a5c] Length = 635 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 V + + I GY E+ P ++ +G + ++MF Sbjct: 260 EGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQILDVSLWQKSGHWDNYKENMF 319 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 320 FTDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GLLR 376 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E A ++ Sbjct: 377 VRGFTQDDGHIFCTEAQIESEVTAFHRQALQVYADFGF 414 >gi|70995366|ref|XP_752440.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|66850075|gb|EAL90402.1| prolyl-tRNA synthetase [Aspergillus fumigatus Af293] Length = 584 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 15/179 (8%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 + +ID H G ++VS + E +G++ + ++ L PT E +T Sbjct: 50 LERLIDKHMRSVGASKVSLSSISSQELWEQSGRLKEGSES------RFLLAPTHEEEITT 103 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE-EDSFT 297 L + LPLR ++ +R E R +G+LR +F +L + E++ Sbjct: 104 LVGSLTKSYRDLPLRVYQISRKYRDEP----RPRQGLLRGREFLMKDLYTFDYSVEEALK 159 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC 356 + + + + + L + Y V + +G++G + E + SCS C Sbjct: 160 TYNLVKAAYKNLFDELKIPYLVAAADSGNMG----GSLSHEFHFPSSKGEDTVISCSNC 214 >gi|194333013|ref|YP_002014873.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] gi|238693296|sp|B4S3D2|SYT_PROA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|194310831|gb|ACF45226.1| threonyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] Length = 657 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 60/199 (30%), Gaps = 22/199 (11%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV----SLTNLYSHEI 244 + GY V P + +G P +++ F + E + + H I Sbjct: 298 KRGYVPVYTPHIGNIGLYKRSGHYPYYSESQFPPLTYTDDLGREEQYLLKPMNCPHHHMI 357 Query: 245 IE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + LP+R T +R E + G++R F + + R + E Sbjct: 358 YSSKLRSYRDLPIRLTEFGTVYRHEQSG---ELNGLIRARGFTQDDSHIYCRPDQLVDEI 414 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + + + L + L D EVW + RE Sbjct: 415 CNAIDLTKFVFATLGFDDIQIRLSLHDPENQDKYGGTKEVWEQAEKDVREA--------- 465 Query: 360 QSRRMNSRYRDPNSKSLKF 378 + RMN Y ++ + Sbjct: 466 -ADRMNIDYFTGIGEASFY 483 >gi|262374878|ref|ZP_06068112.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145] gi|262309891|gb|EEY91020.1| threonyl-tRNA synthetase [Acinetobacter lwoffii SH145] Length = 640 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYEEIRTPQVVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTT--DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD+MF T + + + +++ + + LP+R R+E + Sbjct: 310 ANYADNMFTTHSENRNYAVKPMNCPCHVQVFNQGLKSYRDLPVRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + +E E + ++ K + L T Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGPEVADFIKLTLDVYKDFGFEEVQMKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNL 346 + D ++W + Sbjct: 423 PEKRVGDDKLWDMAEKS 439 >gi|323336851|gb|EGA78113.1| Mst1p [Saccharomyces cerevisiae Vin13] gi|323347699|gb|EGA81963.1| Mst1p [Saccharomyces cerevisiae Lalvin QA23] Length = 462 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 9/159 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + A + L +FM + G+ EV PL+ + +G +ADDMF Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 221 CT------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 + L P + ++ + LPLRF+ +P R+EA A G Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALS---G 171 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 + R +F + + +E L + + ++ Sbjct: 172 LTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKI 210 >gi|317057674|ref|YP_004106141.1| threonyl-tRNA synthetase [Ruminococcus albus 7] gi|315449943|gb|ADU23507.1| threonyl-tRNA synthetase [Ruminococcus albus 7] Length = 648 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 97/307 (31%), Gaps = 38/307 (12%) Query: 43 KIEDIRARRNSNSAQIG--------------QAIAEGNLSLVDALKNETSTLKEQLPILE 88 +E I+A + + G + + E + L ++ + E+L + Sbjct: 116 DLEKIQAEMKKLAKE-GFELERFELSRDEAVKLMEEKGENFKVELIDKHDSKGEKLSFYK 174 Query: 89 KEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 + + I I G + + + R G + EH + Sbjct: 175 QGDFVDLCAGPHIMSVAPIKAIKLTQCTGAYWGKAEDGIQMSRIYGTAYPKASMLEEHLK 234 Query: 144 IGEALGLMD---FDRATKLSGARFSVLTGHLAHLER-----ALGQFMIDLHTSEHGYTEV 195 E L D R + + G L + Q I+ + GY Sbjct: 235 QMEEAKLRDHNKLGRELEYFTTVDYIGQGLPILLPKGAKVIQTLQRWIEDEEYKRGYQLT 294 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT--SEVSLTNLYSHEII-----ESK 248 P + + E +G + D MF D + +T + +++ + Sbjct: 295 KTPFMSKRELYKISGHWDHYRDGMFILGDPDDETKECFALRPMTCPFQYQVFLNRKRSYR 354 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LP+R + FR+E + G++R QF E I R E E + L A+ Sbjct: 355 DLPMRLGETSTLFRNEDSG---EMHGLIRVRQFTISEGHLILRPEQLEEEFKGCLDLAKY 411 Query: 309 ILKRLDL 315 L+ + L Sbjct: 412 CLETIGL 418 >gi|71275167|ref|ZP_00651454.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon] gi|170731158|ref|YP_001776591.1| threonyl-tRNA synthetase [Xylella fastidiosa M12] gi|238687955|sp|B0U5E3|SYT_XYLFM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71163976|gb|EAO13691.1| Threonyl-tRNA synthetase, class IIa [Xylella fastidiosa Dixon] gi|167965951|gb|ACA12961.1| threonyl-tRNA synthetase [Xylella fastidiosa M12] Length = 635 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 V + + I GY E+ P ++ +G + ++MF Sbjct: 260 EGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQILDVSLWQKSGHWDNYKENMF 319 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 320 FTDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GLLR 376 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E E A ++ Sbjct: 377 VRGFTQDDGHIFCTEAQIEAEVTAFHRQALQVYADFGF 414 >gi|323446287|gb|EGB02506.1| hypothetical protein AURANDRAFT_59726 [Aureococcus anophagefferens] Length = 452 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + +G A + + H GY + P + + Sbjct: 36 KKLDLFSIQEAAGGGLCFWHPRGARIRMLMEDTWKAAH-ERGGYELLVTPHIANVDLWKT 94 Query: 209 TGQIPKFAD---DMFCTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSE 264 +G +A+ D ++ + +Y ++ + LP R+ L +R E Sbjct: 95 SGHFDFYAEGMFDQMDVEKEQYQLKPMNCPFHCLVYKDQLRSYRDLPFRWAELGTVYRYE 154 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +G++R F + + E E +L EEIL + Sbjct: 155 RSG---TLQGLMRVRGFTQDDAHIFCTPEQLEDEIVAVLELTEEILSKFGF 202 >gi|259147648|emb|CAY80898.1| Mst1p [Saccharomyces cerevisiae EC1118] Length = 462 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 9/159 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + A + L +FM + G+ EV PL+ + +G +ADDMF Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 221 CT------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 + L P + ++ + LPLRF+ +P R+EA A G Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALS---G 171 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 + R +F + + +E L + + ++ Sbjct: 172 LTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKI 210 >gi|209966088|ref|YP_002299003.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW] gi|238065118|sp|B6IV67|SYT_RHOCS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|209959554|gb|ACJ00191.1| threonyl-tRNA synthetase ThrS [Rhodospirillum centenum SW] Length = 651 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 59/207 (28%), Gaps = 12/207 (5%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 R+ + +H E + + D A SV Sbjct: 216 QRIYGTAWRTEKELADHLHQIEEAEKRDHRKLGREMDLFHVQEEAVGSVFWHPKGWALYR 275 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------GRWL 228 + I GY EV P L +G + D+MF + + Sbjct: 276 TLENYIRTKLDAAGYVEVRTPQLYDSSLFKASGHWDMYGDNMFKIRESVAEDGTEKFLGV 335 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 P + + ++ + + LPLR R+E A G+LR F + + Sbjct: 336 KPMNCPAHVQIFRQGLKSYRDLPLRMAEFGNCHRNEPSGALH---GILRVRNFTQDDAHI 392 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDL 315 E+ E + + + K L Sbjct: 393 FCTEDQVGQEAKEYFALQLGVYKDLGF 419 >gi|317153730|ref|YP_004121778.1| threonyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316943981|gb|ADU63032.1| threonyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 645 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 7/174 (4%) Query: 150 LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 +D + G + + L F H + GY V PL+++ E + Sbjct: 248 QLDLFSTHEDVGGGMILWHPKGGLIRTILEDFERKEHL-KRGYQIVQGPLILKRELWEKS 306 Query: 210 GQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 G + ++M+ T + P + +S ++ +I + LP R+ L R E Sbjct: 307 GHYDNYRENMYFTEIDEQSYGIKPMNCLSHMLIFKRKIQSYRDLPQRYFELGVVHRHEKS 366 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 G++R F + + I R + TE + + +I+ + Sbjct: 367 GVLH---GLMRVRSFTQDDAHLICRPDQLQTEIIGVFNFVRDIMGLFGFEFEAE 417 >gi|28199783|ref|NP_780097.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182682533|ref|YP_001830693.1| threonyl-tRNA synthetase [Xylella fastidiosa M23] gi|32130161|sp|Q87AB2|SYT_XYLFT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238691115|sp|B2I9P8|SYT_XYLF2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|28057904|gb|AAO29746.1| threonyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|182632643|gb|ACB93419.1| threonyl-tRNA synthetase [Xylella fastidiosa M23] gi|307578811|gb|ADN62780.1| threonyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 635 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 V + + I GY E+ P ++ +G + ++MF Sbjct: 260 EGPGLVFWHPKGWVIWQTIENYIRRVYRNSGYGELRCPQILDVSLWQKSGHWDNYKENMF 319 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 320 FTDSEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GLLR 376 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E E A ++ Sbjct: 377 VRGFTQDDGHIFCTEAQIEAEVTAFHRQALQVYADFGF 414 >gi|330720856|gb|EGG99050.1| Threonyl-tRNA synthetase [gamma proteobacterium IMCC2047] Length = 639 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 92/312 (29%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D +RI + +E + R I + ++ + V A + E+ L+ + Sbjct: 105 DVDLDHRITDEDMETLEKRMKELVKTQYDVIKKKVSWHDALEVFAERGESYKLQILQQDI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE------- 140 ++ + ++ + + + + + + S + + Sbjct: 165 DQSDSPGLYYHQEYVDMCRGPHVPNMRFCEHFKLMRVSGAYWRGDSDNKMLQRIYGTAFA 224 Query: 141 -------HFEIGEALGLMDFDRATK-------LSGARFSVLTGHLAHLERALGQFMIDLH 186 + E D + K A V + + Sbjct: 225 DKKQLKKYLNFLEEASKRDHRKLAKKLDLFHLQEEAPGMVFWHAKGWSIYQTVEQYMRKV 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--CTTDGRWLIPTSEVSL-TNLYSHE 243 ++GY E+ P LV +G KF D+MF + + + + +++ Sbjct: 285 QHDNGYQEIKTPQLVDFSLWERSGHADKFGDEMFSSHSENKDYAVKPMNCPCHVQVFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E +G++R F + + E E + Sbjct: 345 LRSYRDLPLRLAEFGCCHRNEPSG---TLQGLMRVRGFVQDDAHIFCAESQIQDEVASFI 401 Query: 304 SCAEEILKRLDL 315 + + Sbjct: 402 DLLYSVYQDFGF 413 >gi|260775804|ref|ZP_05884700.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260608220|gb|EEX34389.1| threonyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 392 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 65/193 (33%), Gaps = 9/193 (4%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 FD + +SG GH Q I +GY EV +P+L +G Sbjct: 15 FDISESVSGMVDWYPKGHEL---YRKVQAYIRSVQKRYGYHEVRSPVLANHSVWTTSGHN 71 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRD 271 K+ ++MF + + ++++ + + LP R R+E+ + Sbjct: 72 EKYGENMFHVPEHNLSVKPMSCPFHISMFNELVSSYRELPYRIAEFGLCHRNESSGSL-- 129 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 G+ R F + + +E+ E + + E+ + R L Sbjct: 130 -NGLFRLRAFNQDDGHIFCQEQQIKDELKHFCAMLFEMYEHFGF-SRKDISVKISLRPKN 187 Query: 332 CKTYDLEVWLAGQ 344 D E+W + Sbjct: 188 KIGSD-ELWSRSE 199 >gi|313112983|ref|ZP_07798626.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310624703|gb|EFQ08015.1| threonyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 594 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 84/311 (27%), Gaps = 22/311 (7%) Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 +A+ + + L ++ ++ E S Sbjct: 94 AEAVKLMEERKENYKIEHMADLADETEFSFFQQGEYVDMCIGPHLTYTKALKAFKITQQS 153 Query: 119 ANENILIRSVGKKPSAI---HLSREHFEIGEALGLMDFDRAT-KLSGARFSVLTGHLA-- 172 + ++E + E +R K+ +T L Sbjct: 154 GAYWKNDKENKMLTRINGVAFRNQEELDAWEKEQQEARERDHRKIGKEMGLFMTDDLVGR 213 Query: 173 ---------HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 + + I GY V P + +G + ++MF Sbjct: 214 GLPMFLPAGYTVWQELENYIKEKERARGYLHVMTPCIGTVNLYKTSGHWDHYRENMFPAM 273 Query: 224 DG---RWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + +++ +Y++ + LP+R +A FR E+ +G+ R Sbjct: 274 EMEGESYVLRPMNCPHHMMIYANRPHSYRDLPMRIGEIAHDFRYESSG---TLKGIERGR 330 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 F + + E +E + E+ K ++ L D D + Sbjct: 331 HFCQNDAHLFCTPEQIKSEVANVCDLIFEVYKDFNITDYRCVLSLRDPADKKKYHDDDAM 390 Query: 340 WLAGQNLYREI 350 W + RE+ Sbjct: 391 WNHAEQALREV 401 >gi|257440090|ref|ZP_05615845.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165] gi|257197442|gb|EEU95726.1| threonine--tRNA ligase [Faecalibacterium prausnitzii A2-165] Length = 611 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 80/296 (27%), Gaps = 22/296 (7%) Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 + L ++ ++ E S + Sbjct: 124 IEHMADLADETEFSFFQQGEYVDMCIGPHLTYTKALKAFKITQQSGAYWKNDKENKMLTR 183 Query: 134 AI---HLSREHFEIGEALGLMDFDRAT-KLSGARFSVLTGHLA-----------HLERAL 178 ++E E E +R K+ +T L + Sbjct: 184 INGVAFHNQEELEAWEKEQQEARERDHRKIGKEMGLFMTDDLVGRGLPMFLPAGYTVWQE 243 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVS 235 + I GY V P + +G + ++MF + +++ Sbjct: 244 LENYIKEKERARGYLHVMTPCIGTVNLYKTSGHWDHYRENMFPAMEMEGESYVLRPMNCP 303 Query: 236 L-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +Y++ + LP+R +A FR E+ +G+ R F + + E Sbjct: 304 HHMMIYANRPHSYRDLPMRIGEIAHDFRYESSG---TLKGIERGRHFCQNDAHLFCTPEQ 360 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 +E + + E K + L D D +W +N RE+ Sbjct: 361 IKSEVADVCNLIFETYKDFKITDYRCVLSLRDPADKKKYHDDDAMWNHAENALREV 416 >gi|313897385|ref|ZP_07830928.1| glycine--tRNA ligase [Clostridium sp. HGF2] gi|312957755|gb|EFR39380.1| glycine--tRNA ligase [Clostridium sp. HGF2] Length = 460 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 92/304 (30%), Gaps = 22/304 (7%) Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 E + ++ +V + + + RA +L Sbjct: 51 WWRKFIQESPYNTGIQSAILMNPAVWVASGHVGGFSDPLMDCKECKSRF--RADQLIEDA 108 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 + A+ ++ + + + + M+ T Q + Sbjct: 109 TNGEVSVEGWSNEAMMDYIEEHQLKCPKCGAHNFTDIRQFNLMFKTFQ-----GVVEDAK 163 Query: 224 DGRWLIP-TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 +L P T++ N + + K LP + SFR+E + R +F Sbjct: 164 SAIYLRPETAQGMFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFE 219 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEV 339 + EL + ++ L L + H R +L F + T D+E Sbjct: 220 QMELEFFCQPGTDMEWYQYYKDYCMSFLTNLGINSDHLRFRDHTAEELAFYSKGTCDIEY 279 Query: 340 WLAGQNLYREISSCSTCGNF------QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCL 393 Q + E+ + ++ ++ + + Y DP + + + V V R + Sbjct: 280 NFHSQIGWGELWGIADRTDYDLKQHQEASKKSLEYLDPATNEKYLAYCV-EPAVGVERLM 338 Query: 394 IAIL 397 +A + Sbjct: 339 LAFM 342 >gi|300691315|ref|YP_003752310.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07] gi|299078375|emb|CBJ51025.1| threonine tRNA synthetase [Ralstonia solanacearum PSI07] Length = 635 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 50/168 (29%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + S GY EV P ++ +G Sbjct: 250 LDLFHLQEEAPGMVFWHPKGWEIWQAVEQYMRGRLSNAGYREVRTPQVMDRTLWEHSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + +++H + + LPLR R+E Sbjct: 310 QNYKENMFVTESEK--REYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E E A + + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEGQIMAEARDFNDLAFSVYEDFGF 412 >gi|88803834|ref|ZP_01119357.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P] gi|88780362|gb|EAR11544.1| threonyl-tRNA synthetase [Polaribacter irgensii 23-P] Length = 646 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 91/349 (26%), Gaps = 30/349 (8%) Query: 23 LEPQSEYILSLDEKNRILIKK-IEDIRARRN----SNSAQIGQAI-AEGNLSLVDALKNE 76 + E + D+ + L K +E R + S S + A + L Sbjct: 104 YDVDLEEDIISDKDFKQLETKFLEIARGKHEFSIRSVSKADALSKYAAEDNPYKVELIEN 163 Query: 77 TSTLKEQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK 131 + + + + +I I + L R G Sbjct: 164 LTD--GDITFCDHSDFTDLCRGGHVPNTGIIKAIKITSVAGAYWRGDEKNKQLTRVYGIS 221 Query: 132 PSAIHLSREHFEIGEALGLMDFD---RATKLSGARFSVLTGHLAHLERALGQF-----MI 183 L E+ + E D R +L V G L + + Sbjct: 222 FPKQKLLTEYLALLEEAKQRDHRKLGRELELFTFSQKVGAGLPLWLPKGAALRGRLEDFL 281 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYS- 241 + GY V P + + E +G K+ AD + + + Sbjct: 282 KKAQKKAGYEMVMTPHIGQKELYVTSGHYEKYGADSFQSIKTPKMDEEFLLKPMNCPHHC 341 Query: 242 ----HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 + K LP RF +R E + G+ R F + + E Sbjct: 342 EVYNFKPYSYKDLPKRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCTPEQLDQ 398 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 E + ++ + L + D D+E W +N Sbjct: 399 EFKDVIDLVLYVFSSLGFEDFTAQVSIRDKNTPEKYIGDVETWEIAENA 447 >gi|113475159|ref|YP_721220.1| threonyl-tRNA synthetase [Trichodesmium erythraeum IMS101] gi|110166207|gb|ABG50747.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Trichodesmium erythraeum IMS101] Length = 608 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 62/200 (31%), Gaps = 15/200 (7%) Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 L G + T L+ +L F+ + GY V P + R + +G K+ +D Sbjct: 218 LVGPGLPLWTPKGTMLKNSLKDFLQQEQL-KRGYLPVDTPHIARIDLFKTSGHWQKYKED 276 Query: 219 MFCTTDGRWLIPTSEVSL----------TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 MF E +Y +E+ + LP+R +R E Sbjct: 277 MFPMMAEDEQAEALEQGFVLKPMNCPFHIQIYKNELRSYRELPIRLAEFGTVYRHEKSG- 335 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 + G+ R F + + E E ++ + K L L L D Sbjct: 336 --ELGGLTRVRGFTQDDSHLFVTPEQLDAEFLSVVDLTLFVFKSLQLQNFKARLSFRDPN 393 Query: 329 FSACKTYDLEVWLAGQNLYR 348 D E W + R Sbjct: 394 LDKYIGSD-EAWEKAEGAIR 412 >gi|262369846|ref|ZP_06063173.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046] gi|262314885|gb|EEY95925.1| threonyl-tRNA synthetase [Acinetobacter johnsonii SH046] Length = 640 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 50/168 (29%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHPNGWTIYQVLEQYMRKVQQDNGYLEIRTPQVVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGS 267 +AD MF T + + ++ + LP+R R+E Sbjct: 310 ANYADGMFTTHSES--RNYAIKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + G++R F + + +E E + ++ K Sbjct: 368 SLH---GIMRVRGFTQDDAHIFCTKEQIGQEVADFIQLTLDVYKDFGF 412 >gi|114559271|ref|XP_001168925.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 8 [Pan troglodytes] Length = 701 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 61/194 (31%), Gaps = 9/194 (4%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNALVAFIRAEYAH-RGFSEVKTPTLFSTKLWEQSGHWEHYQEDMF 376 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + ++ +++H + LPLR R+EA G+ R Sbjct: 377 AVQHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGL---GGLTR 433 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR--VVSLCTGDLGFSACKTY 335 F + + + E + L + L +R + + +G LG Sbjct: 434 LRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRPSGFLGDPCLWDQ 493 Query: 336 DLEVWLAGQNLYRE 349 +V + E Sbjct: 494 AEQVLKQALKEFGE 507 >gi|310779473|ref|YP_003967806.1| threonyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] gi|309748796|gb|ADO83458.1| threonyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] Length = 640 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 51/156 (32%), Gaps = 7/156 (4%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G F + L HT + GY ++ P+++ E +G + ++M+ Sbjct: 259 GPGFPFFMPKGMTIRNILIDLWRKEHT-KAGYEQIMTPIMLNKELWETSGHWYNYRENMY 317 Query: 221 CTTDGRWLIPTSEV---SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + + Y E+ K LP+R L R E A G++R Sbjct: 318 TSEIDETEFAIKPMNCPGGVLAYKQEMHSYKDLPIRAGELGTVHRHEFSGALH---GLMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 F + + E E ++ ++ L Sbjct: 375 VRSFTQDDAHIFMTPEQIEDEIIGVIELIDKFYSGL 410 >gi|229815156|ref|ZP_04445493.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM 13280] gi|229809386|gb|EEP45151.1| hypothetical protein COLINT_02202 [Collinsella intestinalis DSM 13280] Length = 595 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 9/173 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 F + L+ L + ++H + GY E+S P ++ +G + D+M+ Sbjct: 220 APGFPFFLPNGMVLKNTLLDYWREIH-HKAGYVEISTPQIMNKSLWLTSGHWDHYKDNMY 278 Query: 221 CTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + P + +YS + + LP+R + R E A G+ R Sbjct: 279 STMIDDEEYCIKPMNCPGGVLVYSSKPHSYRELPIRAGEIGLVHRHELRGALH---GLFR 335 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKR--LDLHYRVVSLCTGDLG 328 F + + E E ++ + + ++ H + + +G Sbjct: 336 VRCFNQDDAHLFVTPEQLTDEIVGVVRLIDSVYQKFGFKYHVELSTRPEDSMG 388 >gi|73981327|ref|XP_860843.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 6 [Canis familiaris] Length = 701 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 64/194 (32%), Gaps = 9/194 (4%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ +T G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNALVAFIRAEYT-RRGFSEVKTPTLFSAKLWELSGHWEHYQEDMF 376 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 + ++ +++H + LPLR R+EA + G+ R Sbjct: 377 VLHHSTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRAEASGSL---GGLTR 433 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR--VVSLCTGDLGFSACKTY 335 F + + + E + L + L +R + + +G LG S Sbjct: 434 LRCFQQDDAHIFCAPDQLEEEIQGCLDFLRSVYAVLGFSFRLALSTRPSGFLGESCLWDQ 493 Query: 336 DLEVWLAGQNLYRE 349 +V + E Sbjct: 494 AEQVLQRALEEFGE 507 >gi|299066586|emb|CBJ37776.1| threonine tRNA synthetase [Ralstonia solanacearum CMR15] Length = 635 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 58/187 (31%), Gaps = 17/187 (9%) Query: 141 HFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 + + E D + K+ A V + + + GY+ Sbjct: 231 YLHMLEEAEKRDHRKLGKVLDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYS 290 Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESK 248 EV P ++ +G + ++MF T + + + +++H + + Sbjct: 291 EVRTPQVMDRGLWERSGHWENYKENMFVTESEK--REYAIKPMNCPGHVQIFNHGLRSYR 348 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LPLR R+E A G++R F + + E E + A Sbjct: 349 DLPLRLAEFGACHRNEPSGALH---GLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFS 405 Query: 309 ILKRLDL 315 + + Sbjct: 406 VYEDFGF 412 >gi|225374732|ref|ZP_03751953.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM 16841] gi|225213424|gb|EEG95778.1| hypothetical protein ROSEINA2194_00352 [Roseburia inulinivorans DSM 16841] Length = 594 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 109/341 (31%), Gaps = 21/341 (6%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 E I +++++ + + K+ + I R S + + + +D ++ Sbjct: 58 INDEAIAAIEKEMKKVCKEGKKI--YRREISKAEAMEMFKDDPYKLDLIEGLEDGNISVY 115 Query: 85 PILEKEEHEVCSSLKKLISC--IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHF 142 + + + C V V AN +++ R G EH Sbjct: 116 DQGDFTDLCRGPHVDNTKLCKNFKLVKYSGVYWKGDANNHVMQRIYGVCFPTPEELEEHL 175 Query: 143 EIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 ++ E D + K L G + + + L ++ + GY Sbjct: 176 KLLEEAKDRDHRKIGKEMNLFMSDDLVGRGLPMFLPKGYTVWQELENYIKAKE-RKLGYL 234 Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT----NLYSHEIIESKS 249 V P + +G + D+MF + +Y++ + K Sbjct: 235 HVMTPCVGTVNLYKTSGHWDHYKDNMFPAMEVEGESFVLRPMNCPHHMMIYANRMHSYKD 294 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R +A FR EA +G+ R F + + E +E +++ + Sbjct: 295 LPIRIGEIAHDFRFEASG---TLKGIERGRHFCQNDAHLFVTPEQIESEFSQVVDLIFDT 351 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 K ++ L D D E+W +N R++ Sbjct: 352 YKDFNITDYRCVLSLRDPADKVKYHDDDEMWNTAENALRKV 392 >gi|303233025|ref|ZP_07319704.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4] gi|302480896|gb|EFL43977.1| threonine--tRNA ligase [Atopobium vaginae PB189-T1-4] Length = 589 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 59/164 (35%), Gaps = 7/164 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +G F + + L ++ ++ ++GY ++ P+++ + +G + ++M Sbjct: 211 AGPGFPFWLPNGMRIRNELMKYWQEMQ-DQYGYEQIQTPIILSRKLWETSGHWDHYKENM 269 Query: 220 FCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + T + + P + +Y + + LPL+ R E G+ Sbjct: 270 YTTVIDDEDFAIKPMNCPGACLVYMSKPRSYRDLPLKLAEAGLDHRHELKG---TLHGLF 326 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 R +F + + R + E + K+ Y+V Sbjct: 327 RVREFTQDDAHLFIRPDQICDEVREVTELISAYYKQFGFPYKVE 370 >gi|312143811|ref|YP_003995257.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] gi|311904462|gb|ADQ14903.1| threonyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] Length = 652 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 101/342 (29%), Gaps = 36/342 (10%) Query: 41 IKKIEDIRAR-RNSNSAQIGQAIAEGNLSLVDALKNETST-LKEQLPILEKEEHEVCSSL 98 + +E+I A + I E AL E + K +L +E Sbjct: 116 QESLEEIEAEMQKIIDEDIEVRRKELPREEAIALMEERNEDYKIELINGLDDEMISLYFQ 175 Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHF---------------- 142 + L + + + + + + Sbjct: 176 GDFVDLCRGPHLPSTGYVKAFKLLNTAGAYWRGDENNAMLQRIYGTAFASQKELEKYLER 235 Query: 143 -------EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 + + +D G +L A + + L +F+ D + GY Sbjct: 236 REEAKKRDHNKLGRELDLFMTVDEIGQGLPLLKPKGAKVVQILQRFVEDEE-EKRGYQIT 294 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMF---CTTDGRWLIPTSEVSL---TNLYSHEIIESKS 249 P + + + +G + D MF L+ ++ +Y+ ++ + Sbjct: 295 KTPFMAKSDLYEISGHWEHYKDGMFILGDEEKDDNLMALRPMTCPFQFQIYNSKLRSYRD 354 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R++ + FR+EA + G++R QF E I E E ++ + Sbjct: 355 LPIRYSETSSLFRNEASG---EMHGLIRLRQFTISEGHLIVTPEQLEEEFRGVIDLINYM 411 Query: 310 LKRLDLH-YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 ++ + + D + E W Q + I Sbjct: 412 MESIGIEDDIWYRFSKWDPENKDKYIDNPEAWKDSQAKMKTI 453 >gi|295092070|emb|CBK78177.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Clostridium cf. saccharolyticum K10] Length = 650 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 100/316 (31%), Gaps = 25/316 (7%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQA-IAEGNLSLVDALKN---ETSTLK--EQLP 85 ++ + + ++K E++ R + + A + E L E + + Q Sbjct: 125 KIEAEMKKIVK--ENLPIERFTLPREEAIAFMKEKEEPYKVELIEDLPEGAEISFYRQGE 182 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 ++ S K + + L S +L R + + Sbjct: 183 FVDLCAGPHLMSTKDVGKAYKLLNLAGAYWRGSEKNKMLTRIYATAFFKKEELEAYITMM 242 Query: 146 EALGLMDFDRATKL--------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 E D + K +G F L+ L + ++H + GY E+S Sbjct: 243 EEAKKRDHRKLGKELGLFMMHDAGPGFPFFLPKGMQLKNTLLDYWREIH-KKAGYVEIST 301 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 P+++ +G + ++M+ T + + P + +Y+ E + LPLR Sbjct: 302 PIILNRSLWETSGHWDHYKNNMYTTVIDEEDYAIKPMNCPGGVLVYASEPRSYRDLPLRM 361 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS--CAEEILKR 312 L R E G++R F + + E E + + + L Sbjct: 362 GELGLVHRHEKSG---QLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVATLINQVYTLFG 418 Query: 313 LDLHYRVVSLCTGDLG 328 H + + +G Sbjct: 419 FKYHVELSTRPEDSMG 434 >gi|298709340|emb|CBJ31276.1| ATP binding / tRNA ligase/ threonine-tRNA ligase [Ectocarpus siliculosus] Length = 470 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + +G + + + F H + GY + P + + Sbjct: 288 KKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHL-DKGYELLYTPHVANLDLWKT 346 Query: 209 TGQIPKFAD---DMFCTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSE 264 +G + D D ++ I +Y ++ + LP+R+ + +R E Sbjct: 347 SGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYE 406 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E +L E IL R Sbjct: 407 RSG---TLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGF 454 >gi|253580110|ref|ZP_04857377.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848629|gb|EES76592.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 653 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 11/193 (5%) Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 + G ++ + + + L +++ D T + GY PL+ + + +G Sbjct: 252 TTVDVIGQGLPLIMPNGVIMMQELQRWIEDEET-KRGYIRTKTPLMAKSDLYKISGHWDH 310 Query: 215 FADDMF-----CTTDGRWLIPTSEVSLTNL-YSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 + + MF T + + Y E + LPLR+ + FR+E Sbjct: 311 YKEGMFVLGDEETDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYGETSTLFRNEDSG- 369 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG-DL 327 + G+ R QF E I R + E + ++ A+ L+ L + V + D Sbjct: 370 --EMHGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLQVLGVEEDVTYHLSKWDP 427 Query: 328 GFSACKTYDLEVW 340 D EVW Sbjct: 428 NNREKYIGDAEVW 440 >gi|126640661|ref|YP_001083645.1| threonyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978] Length = 549 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 159 LDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHA 218 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A++MF T ++ +++ + + LP+R R+E + Sbjct: 219 ANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 278 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 279 H---GIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGF 321 >gi|332855673|ref|XP_524258.3| PREDICTED: seryl-tRNA synthetase, mitochondrial-like [Pan troglodytes] Length = 205 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 9/133 (6%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDIERFCACPEEAAHALELRKGELRSADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAV 117 Query: 59 GQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +A + V L+ ++++L L E ++ +PN + Sbjct: 118 RALLANQDSGEVQQDPKYQGLRARGREIRKELVHLYPREAQLEEQFYLQALKLPNQTHPD 177 Query: 113 VPIGTSANENILI 125 VP+G + +L Sbjct: 178 VPVGDESQARVLH 190 >gi|300703878|ref|YP_003745480.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957] gi|299071541|emb|CBJ42865.1| threonine tRNA synthetase [Ralstonia solanacearum CFBP2957] Length = 635 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY+EV P ++ +G Sbjct: 250 LDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDRTLWEHSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + +++H + + LPLR R+E Sbjct: 310 QNYKENMFVTESEK--REYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E E + A + + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSVYEDFGF 412 >gi|317131189|ref|YP_004090503.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315469168|gb|ADU25772.1| threonyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 645 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 73/204 (35%), Gaps = 16/204 (7%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F G V+ + + + L +F+ D + GY PLL + + +G Sbjct: 253 FFTTVDYIGQGLPVMLPKGSRVLQLLQRFVEDEE-EKRGYLLTKTPLLAKSDLYKISGHW 311 Query: 213 PKFADDMFCTTDGRWLIPT-SEVSLTNLYSHEII-----ESKSLPLRFTTLAPSFRSEAG 266 + D MF D + +T + ++ + LP+R + FR+EA Sbjct: 312 DHYRDGMFVLGDEEKDDEVFALRPMTCPFQFQVYLNKKRSYRDLPMRLGETSTLFRNEAS 371 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 + G++R QF E R + E + + A +LK + L V Sbjct: 372 G---EMHGLIRVRQFTISEGHIACRPDQLEEEFKGCVDLANFMLKTVGLDEDVSYR---- 424 Query: 327 LGFSACKTYDLEVWLAGQNLYREI 350 FS D + ++ + E+ Sbjct: 425 --FSKWDENDRDKYIGTSEQWEEV 446 >gi|291287861|ref|YP_003504677.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290885021|gb|ADD68721.1| threonyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 637 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 97/305 (31%), Gaps = 33/305 (10%) Query: 45 EDIRARRNSNSAQIGQAI--AEGNLSLVDALKNETST-LKEQLPILEKEEHEVCSSLKKL 101 +D++A + +AI ++ DALK K +L +EH Sbjct: 115 DDLKAIEKMMAKIAAEAIPVKRRDVKSSDALKEFADEKYKVELITDIGDEHVSLYDQGDF 174 Query: 102 ISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE--------------HFEIGEA 147 ++ + + + + + + + E Sbjct: 175 TDLCRGPHVDNTKRLKHFKLLSVAGAYWRGNENNKMLQRIYGTSWQTKEDLDAYLNMLEE 234 Query: 148 LGLMDFDRATKL---------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 D + K +GA F + + L L + H + GY V P Sbjct: 235 AEKRDHRKIGKQLKLFTFSEEAGAGFPIYLPNGGALRNVLETYEKQEHI-KRGYDIVYGP 293 Query: 199 LLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +++ + +G + ++M+ T + P + ++ +++ +I + LP R+ Sbjct: 294 SILKQDLWKKSGHYDNYRENMYFTKIDDVDYGVKPMNCLAHMMVFNSDIRSYRDLPQRYF 353 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 L R E G+LR F + + E E ++ +E++ + Sbjct: 354 ELGTVHRHEKSGVLH---GLLRVRAFTQDDAHLFCTPEQLNDEIIGIIDFVDEVMGKFGF 410 Query: 316 HYRVV 320 Y + Sbjct: 411 EYEIE 415 >gi|300361194|ref|ZP_07057371.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03] gi|300353813|gb|EFJ69684.1| threonine--tRNA ligase [Lactobacillus gasseri JV-V03] Length = 643 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 69/386 (17%), Positives = 126/386 (32%), Gaps = 56/386 (14%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP------QSEY---ILSLDEKNRILIKKIEDIRARRN 52 LDI +R L A+ KR +++ + D++++I I ++ ++ Sbjct: 69 LDI--LRATAAFLLEAIAKRKYPELRLGMHEADEGGFFVDTDKEDQIKITELPELE---- 122 Query: 53 SNSAQIGQAIAEGNLSLVDALKN-------ETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 ++ +AI G ++K + K L EK+E V + Sbjct: 123 ---KEMQKAIKNGEKIEYTSMKKSELEDIFKDDQFKLDLLKDEKDEVAVYKLGDFVDFGF 179 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL------ 159 + I ++ K S L R +D D + Sbjct: 180 EALLPNTGKIKNFKLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKERD 239 Query: 160 ----------------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRD 203 GA A + R + ++++D ++ GY V P+L+ Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVAD-GYEHVYTPVLMNV 298 Query: 204 EAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +A +G + DDMF D L P + S +Y H I + LP+R L Sbjct: 299 DAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELG 358 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R E A G+ R + + + + E ++L ++ K D+ Sbjct: 359 MMHRYEKSGALS---GLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDY 415 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQ 344 L D + + E+W Q Sbjct: 416 YFRLSYRDPKNTDKYYANDEMWEKSQ 441 >gi|237808486|ref|YP_002892926.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187] gi|259516783|sp|C4LFH3|SYT_TOLAT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|237500747|gb|ACQ93340.1| threonyl-tRNA synthetase [Tolumonas auensis DSM 9187] Length = 642 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + I E+ Y EV P ++ +G Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWIIFRELETFIRQKLREYDYEEVKGPFMMDRVLWERSGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 311 DKYADAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E E + + V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCAENQIQDEVSACIRMVYDTYSTFGFKNIAVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PEKRIGSDEMW 434 >gi|330882875|gb|EGH17024.1| seryl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 43 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 17/43 (39%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKK 43 MLD + +R + + L R I SL+ + + + Sbjct: 1 MLDSKLLRTQLQDVADRLASRGFTLDVARIESLEAQRKAAQTR 43 >gi|303248736|ref|ZP_07334989.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302489901|gb|EFL49829.1| threonyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 647 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 7/172 (4%) Query: 150 LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 +D ++ GA + + L F H GY V PL++R E + Sbjct: 249 QLDLFSFSEEVGAGMPIWHPKGELIRTILEDFERREHL-RRGYQLVRGPLILRRELWERS 307 Query: 210 GQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 G + ++M+ T + P + +S +Y + + LP R+ L R E Sbjct: 308 GHYDNYRENMYFTEIDGQAYGIKPMNCLSHMLIYKSRVRSYRDLPQRYFELGVVHRHEKS 367 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 G++R QF + + + R + E ++ ++++ Y Sbjct: 368 GVLH---GLMRVRQFTQDDAHILCRPDQLLDEITGVIKFVQDVVALFGFDYE 416 >gi|49475537|ref|YP_033578.1| threonyl-tRNA synthetase [Bartonella henselae str. Houston-1] gi|73919770|sp|Q6G3K1|SYT_BARHE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|49238343|emb|CAF27567.1| Threonyl-tRNA synthetase [Bartonella henselae str. Houston-1] Length = 658 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 88/295 (29%), Gaps = 25/295 (8%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR---RNSNSAQIGQAIAEGNLSLVDALKNET 77 R + + +++K R +I++ + R R + +I E + + Sbjct: 111 RQQPFTLDDLTIIEKKMREIIQRNKPFRKEVWSRKK-AREIFSEKGELYKVELIDSIPDN 169 Query: 78 STLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 LK Q + S ++ + + + AN +L R G + Sbjct: 170 QDLKVYYQGDWFDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFANE 229 Query: 136 HLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHTS 188 + + + + E D R + + + Sbjct: 230 NDLKAYLHMLEEAEKRDHRRLGREMNLFHFQEEGPGMIFWHKKGWKMFQNLINYMRRRLD 289 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--------CTTDGRWLIPTSEVSL-TNL 239 +H Y EV+AP ++ +G + ++MF + + + + Sbjct: 290 DHQYAEVNAPQVLDRSLWEISGHWEWYKENMFKAIPAAEDWDNENVYALKPMNCPGHVQI 349 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 + H + + LP R R E + G++R F + + +E Sbjct: 350 FKHGLKSYRDLPTRIAEFGVVHRYEPSGSLH---GLMRVRCFTQDDAHIFCTDEQ 401 >gi|121997230|ref|YP_001002017.1| threonyl-tRNA synthetase [Halorhodospira halophila SL1] gi|166223346|sp|A1WU53|SYT_HALHL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|121588635|gb|ABM61215.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Halorhodospira halophila SL1] Length = 640 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 52/168 (30%), Gaps = 13/168 (7%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + G F G +LE Q I ++GY E+ P+LV +G Sbjct: 253 FHVQEESPGMVFWHPRGWRLYLE---VQDYIRRLMRDNGYQEIHTPMLVDRSLWERSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNLYSHEII-----ESKSLPLRFTTLAPSFRSEAGS 267 FA++MF T + + E+ + LPLR R+E Sbjct: 310 AMFAENMFVTESES--RDYAVKPMNCPCHVEVFKQGLKSYRDLPLRLAEFGSCHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + + Sbjct: 368 ---TLHGLMRVRGFVQDDAHIFCTENQIQEEVRTFIDLVYRAYRDFGF 412 >gi|82701621|ref|YP_411187.1| threonyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] gi|123727233|sp|Q2YBS6|SYT_NITMU RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|82409686|gb|ABB73795.1| Ser-tRNA(Thr) hydrolase [Nitrosospira multiformis ATCC 25196] Length = 638 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 60/191 (31%), Gaps = 10/191 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + +GY E+ P ++ +G F ++MF Sbjct: 258 EAPGMVFWHPKGWVVWQQVEQYMRDIFRNNGYLEIRTPSVLDKGLWERSGHWENFRENMF 317 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T ++ ++ + + LPLR R+E A G++R Sbjct: 318 VTQAEDREFSVKPMNCPGHVQVFKQGLKSYRDLPLRLAEFGSCHRNEPSGALH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E E + + +++ + +V L T A + Sbjct: 375 VRAFTQDDAHIFCTESQVQDEAVQFIDLLQKVYNDFGFNDILVKLSTR----PAKRVGSE 430 Query: 338 EVWLAGQNLYR 348 E W + R Sbjct: 431 EQWDKAEEALR 441 >gi|269468318|gb|EEZ79994.1| threonyl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 369 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 51/165 (30%), Gaps = 6/165 (3%) Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 D A V + + + ++ Y EV P L+ +G Sbjct: 54 DLFHMQEEAPGMVFWHEKGWTLYQIVEQYMRSVFRDNDYKEVHTPQLIDKSLWEKSGHWD 113 Query: 214 KFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 KF D MF T + P + + +Y+ + + LPLR R+E Sbjct: 114 KFGDAMFTTSSENRDYAVKPMNCPAHIQIYNQGLKSYRDLPLRLAEFGSCHRNEPSG--- 170 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + ++ K Sbjct: 171 TLHGIMRVRNFVQDDGHIFCTENQIQDEVSTFIDLTFDVYKNFGF 215 >gi|51473419|ref|YP_067176.1| threonyl-tRNA synthetase [Rickettsia typhi str. Wilmington] gi|73919822|sp|Q68XE8|SYT_RICTY RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|51459731|gb|AAU03694.1| Threonine translase [Rickettsia typhi str. Wilmington] Length = 635 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 62/201 (30%), Gaps = 6/201 (2%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + + + + E + + D A+ V Sbjct: 215 QRIYGTAWATKEQLDNYLFMLEEAEKRDHRKIGKELDLFHFQEEAQGMVFWHDKGWSIYN 274 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL- 236 + I ++GY EV P+LV +G KF DMF ++ ++ Sbjct: 275 TIEQYIRKKNRKNGYIEVKTPVLVDKSLWEASGHWAKFRCDMFTLETDDKILALKPMNCP 334 Query: 237 --TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ I + LPLR + R+EA A G++R + + EE Sbjct: 335 CHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALH---GLMRVRSLVQDDAHIFCAEEQ 391 Query: 295 SFTEHERMLSCAEEILKRLDL 315 E R E+ K Sbjct: 392 ITDETVRFCKLLTEVYKDFGF 412 >gi|213156053|ref|YP_002318098.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|301346223|ref|ZP_07226964.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB056] gi|301596041|ref|ZP_07241049.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB059] gi|226701414|sp|B7I688|SYT_ACIB5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|213055213|gb|ACJ40115.1| threonyl-tRNA synthetase [Acinetobacter baumannii AB0057] Length = 640 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++GY E+ P +V +G Sbjct: 250 LDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++MF T ++ +++ + + LP+R R+E + Sbjct: 310 ANYVENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ K Sbjct: 370 H---GIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGF 412 >gi|330888315|gb|EGH20976.1| threonyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020] Length = 402 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 10/139 (7%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + E+GY E+ P +V +G +AD+MF Sbjct: 258 EAPGMVFWHPQGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDRSLWEKSGHWANYADNMF 317 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 T + + ++ + LP+R R+E A G+ Sbjct: 318 TTESES--RDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGACHRNEPSGALH---GI 372 Query: 276 LRQHQFWKCELVSITREED 294 +R F + + E+ Sbjct: 373 MRVRGFTQDDAHIFCTEDQ 391 >gi|328774228|gb|EGF84265.1| hypothetical protein BATDEDRAFT_8061 [Batrachochytrium dendrobatidis JAM81] Length = 581 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 69/217 (31%), Gaps = 12/217 (5%) Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGA 162 P + + + R+H IG+ L F Sbjct: 130 QWQTISPHSLSRVSGISFSSGKALREWTLQRQEASKRDHRLIGQKQSLFYFSPL----SL 185 Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 H + + L F+ + ++G+ E+ PL+ +G + +D+ Sbjct: 186 GAPFFLPHGTRIIQRLTDFLRHEY-RKYGFDEIVTPLVFNKSLWEKSGHWKNYKEDITVD 244 Query: 223 T----DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 D + L P + L+S + LP+R+ +P R+EA A G+ R Sbjct: 245 QLNDADIQALKPMNCPGHCLLFSSTSRSYRDLPIRYAEFSPLHRNEASGALT---GLTRV 301 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +F + + E + L + + ++ Sbjct: 302 RKFHQDDGHIFCTPSQIAQEIQSTLKFIDTMYTKILH 338 >gi|260901781|ref|ZP_05910176.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|308108104|gb|EFO45644.1| threonine--tRNA ligase [Vibrio parahaemolyticus AQ4037] Length = 386 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 10/189 (5%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V H + + +E+ Y EV PL++ +G K+AD MF Sbjct: 4 EAPGMVFWHHNGWSIFRDLEVFVRDKLNEYDYQEVKGPLMMDRVLWERSGHWDKYADAMF 63 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + P + +++ + + LPLR R+E A G++R Sbjct: 64 TTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GIMR 120 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 F + + E E + + + VV L T + Sbjct: 121 VRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNIVVKLSTR----PEKRVGSD 176 Query: 338 EVWLAGQNL 346 E+W + Sbjct: 177 EIWDQSEEA 185 >gi|239827997|ref|YP_002950621.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70] gi|259516491|sp|C5D639|SYT_GEOSW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239808290|gb|ACS25355.1| threonyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 644 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 111/342 (32%), Gaps = 28/342 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++++ R ++K E++ R S + +AI D + + E I Sbjct: 118 EDLPKIEQEMRKIVK--ENLEIVRKEVSRE--EAIRLYEEIGDDLKLELINDIPEGETIS 173 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEE-------VPIGTSANENILIRSVGKKPSAIHLSRE 140 E+ E + + E +N +L R G E Sbjct: 174 IYEQGEFFDLCRGVHVPSTGKIKEFKLLNISGAYWRGDSNNKMLQRIYGTAFFKKEDLDE 233 Query: 141 HFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + + D + K G + A + R + ++++D G Sbjct: 234 YLRQLQEAKERDHRKLGKELELFMTSQKVGQGLPLWLPKGATIRRIIERYIVDKEIEL-G 292 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIES 247 Y V P+L E +G + D+MF + L P + +Y +I Sbjct: 293 YQHVYTPVLGSVELYKTSGHWDHYKDNMFPPMEMDNEQLVLRPMNCPHHMMIYKSKIHSY 352 Query: 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAE 307 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 353 RELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLIL 409 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D D E+W QN+ RE Sbjct: 410 EVYKDFGLDEYSFRLSYRDPHDKEKYYDDDEMWEKAQNMLRE 451 >gi|226941673|ref|YP_002796747.1| threonyl-tRNA synthetase [Laribacter hongkongensis HLHK9] gi|254783525|sp|C1DDA6|SYT_LARHH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226716600|gb|ACO75738.1| Syt [Laribacter hongkongensis HLHK9] Length = 633 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 48/166 (28%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + Y EV P +V +G Sbjct: 250 LDLFHIQDEAPGMVFWHPKGWTLWQQVEQYMRRVLIANDYQEVRTPQIVDRSLWEKSGHW 309 Query: 213 PKFADDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + + + +++ + + LPLR R+E + Sbjct: 310 AMYQDLMFTTESEKRDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + + + + Sbjct: 370 H---GIMRVRNFVQDDAHIFCTEAQMQPETAAFIDLLQAVYQDFGF 412 >gi|126174365|ref|YP_001050514.1| threonyl-tRNA synthetase [Shewanella baltica OS155] gi|153000743|ref|YP_001366424.1| threonyl-tRNA synthetase [Shewanella baltica OS185] gi|217973356|ref|YP_002358107.1| threonyl-tRNA synthetase [Shewanella baltica OS223] gi|166225497|sp|A3D4I2|SYT_SHEB5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|166225498|sp|A6WNH2|SYT_SHEB8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783536|sp|B8EES6|SYT_SHEB2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|125997570|gb|ABN61645.1| threonyl-tRNA synthetase [Shewanella baltica OS155] gi|151365361|gb|ABS08361.1| threonyl-tRNA synthetase [Shewanella baltica OS185] gi|217498491|gb|ACK46684.1| threonyl-tRNA synthetase [Shewanella baltica OS223] Length = 642 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 86/312 (27%), Gaps = 31/312 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQ----IGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 +D ++++ I+ + R + + + ++ A + E + + Sbjct: 105 DIDLEHKLTQDDIDALEKRMLQLAKTNYDVVKRVVSWQEARDTFAARGEDYKIAILDENI 164 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 K+ ++ + + + + + S + + + A Sbjct: 165 SKDATPALYHHEEYTDMCRGPHVPNMRFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWA 224 Query: 148 LGL---------------------MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 D A V + + I Sbjct: 225 DKKALSTHLTRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRK 284 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHE 243 +++ Y EV PL++ +G K+++ MF T + P + +++ Sbjct: 285 LNQYTYQEVKGPLMMDRVLWERSGHWDKYSEAMFTTSSENREYAIKPMNCPGHVQIFNQG 344 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LPLR R+E + G++R F + + + E + Sbjct: 345 LKSYRDLPLRMAEFGCCHRNEPSGSLH---GLMRVRGFTQDDAHIFCTDSQVQEEVSACI 401 Query: 304 SCAEEILKRLDL 315 + Sbjct: 402 QMVYDTYATFGF 413 >gi|289548737|ref|YP_003473725.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484] gi|289182354|gb|ADC89598.1| threonyl-tRNA synthetase [Thermocrinis albus DSM 14484] Length = 645 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 89/312 (28%), Gaps = 24/312 (7%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETST- 79 + + E + ++E+ R ++ + ++ R S + + + N Sbjct: 110 GISIREEDLPIIEERMRQIVSR--NLPIVRQEVSKEYALKLFESLKEPYKLDIINRIQEG 167 Query: 80 -LKEQLPILEKEEHEVCSSLKKLISC--IPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + E + + + A++ +L R G Sbjct: 168 DVISVYQQGEFVDLCRGPHVPSTGMVGAFKLTHVAGAYWMGDASKPMLQRIYGIAYWDEK 227 Query: 137 LSREHFEIGEALGLMDFDRATKLSGA---------RFSVLTGHLAHLERALGQFMIDLHT 187 + E + D + K + + L + + H Sbjct: 228 ELEDRLRFYEEVKRRDHRKLGKELEMFMIDEEIGAGLVIWLPKGGIYRKVLEDYWREEHL 287 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSL-TNLYSHE 243 + GY V P + + +G + + +MF D + + +Y + Sbjct: 288 -KRGYQLVYTPHIGNAKLWQKSGHLDHYRQNMFPPMELEDEEYFVKPMNCPFHIAIYKSK 346 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP R L +R E G++R F + + I R + + L Sbjct: 347 VRSYRDLPFRLAELGTVYRYEMSGVLH---GLMRVRGFTQDDAHIICRPDQVDDVIQETL 403 Query: 304 SCAEEILKRLDL 315 A +L+ Sbjct: 404 DFAISMLRDFGF 415 >gi|256830760|ref|YP_003159488.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] gi|256579936|gb|ACU91072.1| threonyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] Length = 644 Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 7/175 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + GA + + L F+ GY V P +++ + Sbjct: 246 PQLDLFSFHERGGAGMAYWHPKGGLVRTILEDFVNKEMI-RRGYGIVRTPQILKRDLWET 304 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 +G + ++M+ T ++ +Y+ + LP+R R E Sbjct: 305 SGHYANYRENMYFTEIDEVPYGVKPMNCVAHMLIYNTSQRSYRDLPVRLFEFGVVHRHEL 364 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 G++R QF + + I R + E + +++ ++++ Y + Sbjct: 365 SGVLH---GLMRVRQFTQDDAHIICRPDQLLDEIKGVMTWIQDLMGVFGFEYSME 416 >gi|167520264|ref|XP_001744471.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776802|gb|EDQ90420.1| predicted protein [Monosiga brevicollis MX1] Length = 473 Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 96/265 (36%), Gaps = 38/265 (14%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 H + + L + +H S +G+ EV +PL+ + +G +++DM Sbjct: 89 SPGAPFWLPHGLRIFKRLEALVRGVH-SNYGFEEVKSPLVYKQHLWNTSGHWEHYSEDMT 147 Query: 221 CTTDG------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 + L P + + ++SHE + LPLRF + R+EA A G Sbjct: 148 VLQHKEDEEVCQALKPMNCPAHCIMFSHEPHSYRELPLRFAEHSALHRNEASGALS---G 204 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R QF + + R + +E R L + RL L V + G+ Sbjct: 205 LTRVRQFHQDDGHIFCRPDQVSSEVARCLEAIGVVYARLGLTPTAVLSTRPETGYVG--- 261 Query: 335 YDLEVWLAGQNLY-----------REISSCSTCGNFQ-SRRMNSRYRDPNS--KSLKFTH 380 LE+W A ++ + R + + +F R Y+D + ++ H Sbjct: 262 -SLEIWCALRSSFIIDIRVRDAMGRTHQTATIQLDFNMPMRFELSYKDEDGAPQTPVLIH 320 Query: 381 TLNGSGVAV----GRCLIAILENYL 401 AV R + + E Y Sbjct: 321 R------AVLGSFERMMALLTEQYW 339 >gi|58582810|ref|YP_201826.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58427404|gb|AAW76441.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 671 Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 296 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 355 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 356 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 412 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E A + Sbjct: 413 VRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 450 >gi|283851379|ref|ZP_06368661.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B] gi|283573329|gb|EFC21307.1| threonyl-tRNA synthetase [Desulfovibrio sp. FW1012B] Length = 647 Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 7/174 (4%) Query: 150 LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 +D ++ GA + + L F H + GY+ V PL++R E + Sbjct: 249 QLDLFSFSEEVGAGMPIWHPKGELVRTILEDFERREHL-KRGYSLVRGPLILRRELWERS 307 Query: 210 GQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 G + ++M+ T + P + ++ +Y I + LP R+ L R E Sbjct: 308 GHYDNYRENMYFTEIDEQSYGIKPMNCLAHMLIYKSRIRSYRDLPQRYFELGVVHRHEKS 367 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 G+LR QF + + + R + E ++ ++++ Y V Sbjct: 368 GVLH---GLLRVRQFTQDDAHILCRPDQLLEEITGVIKFVQDVVGLFGFDYEVE 418 >gi|260911583|ref|ZP_05918168.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] gi|260634289|gb|EEX52394.1| threonine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] Length = 654 Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 89/344 (25%), Gaps = 24/344 (6%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IGQAIAEGNLSLVD--ALKNET 77 ++EK R K+ E I R S + + A+G + L E Sbjct: 111 GTPISENDFPKIEEKMREFAKRDEAI--VRREVSKADALKEFKADGQEYKCEHIDLDLED 168 Query: 78 STLKEQLPI-LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 T+ I I + A ++ L R G Sbjct: 169 GTISTYSQGAFTDLCRGPHLMTTGPIKAIKLTSVAGAFWRGDAEKDQLTRIYGITFPKKK 228 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFS---VLTGHLAHLERAL-----GQFMIDLHTS 188 + E+ + E D + K V G L + Q M+ Sbjct: 229 MLDEYLVMLEEAKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLRLQDMLRKIQK 288 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYS-----H 242 GY EV P + +G + D + + Sbjct: 289 RFGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVFAW 348 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + K LPLR +R E + G+ R F + + R E E R+ Sbjct: 349 KPRSYKDLPLRIAEFGTVYRYEKSG---ELHGLTRVRSFTQDDAHIFCRPEQVKNEFLRV 405 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + + K + D + EVW + Sbjct: 406 MDIIQAVFKIFQFDNFEAQISLRDPNNTTKYIGSDEVWEESEQA 449 >gi|291537165|emb|CBL10277.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Roseburia intestinalis M50/1] Length = 494 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 97/333 (29%), Gaps = 33/333 (9%) Query: 46 DIRARRNSNSAQIGQAIAEGNLSLVDALKN-ETSTLKEQLPILEKEEHEVCSSLKKLISC 104 I + G+ I +S +AL+ + K L ++ + Sbjct: 62 AIEKEMKKVCKE-GKKIYRREISKAEALELFKDDEYKLDLIDGLEDGNISVYDQGDFTDL 120 Query: 105 IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG------------------- 145 ++ + + K + H+ + + + Sbjct: 121 CRGPHVDNTKLCKNFKLIKYSGVYWKGDANNHVMQRIYGVCFPTAEELEEHLKLLEEAKD 180 Query: 146 ----EALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 + M + L G + + + L ++ + GY V P + Sbjct: 181 RDHRKIGKEMHLFMSDDLVGRGLPMFLPKGYTVWQELENYIKAKE-RKLGYLHVMTPCVG 239 Query: 202 RDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT----NLYSHEIIESKSLPLRFTTL 257 +G + ++MF + +Y++ + K LP+R + Sbjct: 240 TVNLYKTSGHWDHYKENMFPAMEVEGESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGEI 299 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 A FR EA +G+ R F + + E +E +++ + K ++ Sbjct: 300 AHDFRFEASG---TLKGIERGRHFCQNDAHLFVTPEQIESEFAKVVELIFDTYKDFNITD 356 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 L D D E+W +N R++ Sbjct: 357 YRCVLSLRDPEDKVKYHDDDEMWNNAENALRKV 389 >gi|17546296|ref|NP_519698.1| threonyl-tRNA synthetase [Ralstonia solanacearum GMI1000] gi|22654118|sp|Q8XZ29|SYT_RALSO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|17428593|emb|CAD15279.1| probable threonyl-trna synthetase (threonine--trna ligase) protein [Ralstonia solanacearum GMI1000] Length = 635 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 10/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + GY+EV P ++ +G Sbjct: 250 LDLFHLQEEAPGMVFWHPKGWQIWQAVEQYMRGRLAGAGYSEVRTPQVMDRGLWERSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 + ++MF T + + + +++H + + LPLR R+E Sbjct: 310 ENYKENMFVTESEK--REYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSG 367 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G++R F + + E E + A I + Sbjct: 368 ALH---GLMRVRGFVQDDAHIFCTEGQIMAEAKDFNDLAFSIYEDFGF 412 >gi|319790149|ref|YP_004151782.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317114651|gb|ADU97141.1| threonyl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 658 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 102/333 (30%), Gaps = 44/333 (13%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 + E + ++ + ++K E R S + + + + + + L++ + Sbjct: 112 VSISEEDLPKIEAEMEKIVKAKEPFRRE--VISREKARELFKNDPYKLKLLESIPEEEEV 169 Query: 83 QLPI-LEKEEHEVCSSLKKLISCIPNV---PLEEVPIGTSANENILIRSVGKKPSAIHLS 138 + E + I + + +L R G Sbjct: 170 SIYWLGEDFFDLCKGPHVEHAGQIKAFKLLSVAGAYWRGDSRNKMLQRIYGTAFWKKKEL 229 Query: 139 REHFEIGEALGLMDFDRATKL---------SGARFSVLTGHLAHLERALGQFMIDLHTSE 189 E E D K +G + A + + + Q++ + H + Sbjct: 230 EEFLHRLEEAKKRDHRVLGKQLDLFGIYEEAGPGLVFWHPNGAIIRQEIEQWVEEEH-RK 288 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTN------- 238 GY + P +++ + +G + ++MF D + EV LT Sbjct: 289 RGYQRIYTPHIMKADLWKRSGHYNFYRENMFFVPVVEHDEEERLGNDEVPLTCSEIEKAH 348 Query: 239 --------------LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 +Y ++ + LP+RF +R E + G+LR F + Sbjct: 349 WYAVKPMNCPGHILIYKSQVRSYRDLPIRFFEFGTVYRYEKSGSLH---GLLRVRGFTQD 405 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 + R + E + ++ ++L L Y Sbjct: 406 DGHIFCRPDQLKEEIQGVMDYIMDLLSTFKLDY 438 >gi|229543582|ref|ZP_04432642.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1] gi|229328002|gb|EEN93677.1| threonyl-tRNA synthetase [Bacillus coagulans 36D1] Length = 640 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 114/338 (33%), Gaps = 21/338 (6%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL---SLVDALKNETSTLKEQL 84 E + ++++ + ++ E++ R S + + + L+DA+ +ET T+ EQ Sbjct: 118 EDLPKIEKEMKKIV--AENLEIVRKVVSRDEARKMFAHDEYKLELIDAIPDETVTVYEQG 175 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 ++ V I + + +N ++ R G H + Sbjct: 176 EFVDL-CRGVHVPSTGKIKEFKLLNIAGAYWRGDSNNKMMQRIYGTAFFKKEDLEAHLKF 234 Query: 145 GEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG----YTEVS 196 E D + K L V G L + A + I+ + + Y V Sbjct: 235 LEEAKERDHRKIGKELELFTNSQKVGQGLPLWLPKGATIRRTIERYIVDKEVKLGYDHVY 294 Query: 197 APLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIESKSLPL 252 P+L + +G + +DMF L P + +Y + I + LP+ Sbjct: 295 TPVLGSVDLYKTSGHWDHYQEDMFPVMKMDNEELVLRPMNCPHHMMVYKNTIHSYRELPI 354 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 R L R E A G+ R + R + E +R++ E+ K Sbjct: 355 RIAELGLMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEEFKRVVELILEVYKD 411 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 ++ L D + D E+W Q + +E Sbjct: 412 FNITDYSFRLSYRDPENTDKYYDDDEMWNKAQAMLKET 449 >gi|84624684|ref|YP_452056.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|73919845|sp|Q5GXY0|SYT_XANOR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|123725509|sp|Q2P0Z5|SYT_XANOM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|84368624|dbj|BAE69782.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 634 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 259 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 319 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E A + Sbjct: 376 VRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413 >gi|288801328|ref|ZP_06406782.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] gi|288331711|gb|EFC70195.1| threonine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] Length = 654 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 96/350 (27%), Gaps = 36/350 (10%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNS--NSAQIGQAIA-EGNLSLVDALKNETS 78 + ++EK R L A++N I +A A + + K E Sbjct: 111 GVSISENDFPKIEEKMREL--------AKKNEPIVRKDISKADALKEFSADGQEYKCEHI 162 Query: 79 TLK-EQLPILEKEEHEVCSSLKKLISC-------IPNVPLEEVPIGTSANENILIRSVGK 130 L E I + + I + A ++ + R G Sbjct: 163 DLDLEDGTISTYTQGAFTDLCRGPHLMSTGAIKAIKLTSVAGAFWRGDAEKDQMTRIYGI 222 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS---VLTGHLAHLERAL-----GQFM 182 + E+ + E D + K V G L + Q M Sbjct: 223 TFPKKKMLDEYLLMIEEAKKRDHRKIGKEMELFMFSDRVGKGMPIWLPKGTELRLRLQDM 282 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNLYS 241 + GY EV P+L +G ++ D F T + + Sbjct: 283 LRKIQKRFGYQEVMCPVLGGKNLYVTSGHYAHYSKDAFRPITTPEEGEEYMLKPMNCPHH 342 Query: 242 -----HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 + K LPLR + +R E + G+ R F + + R E Sbjct: 343 CEVFAWKPRSYKDLPLRISEFGNVYRYEKSG---ELHGLTRVRAFTQDDAHIFCRPEQVK 399 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 E R++ + +LK D + D E W + Sbjct: 400 NEFLRVMDIIQAVLKIFDFKNFEAQISLRDPNNKEKYIGSDEAWHEAEQA 449 >gi|188577599|ref|YP_001914528.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522051|gb|ACD59996.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 649 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 274 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 333 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 334 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 390 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E A + Sbjct: 391 VRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 428 >gi|295115128|emb|CBL35975.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [butyrate-producing bacterium SM4/1] Length = 605 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 100/316 (31%), Gaps = 25/316 (7%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQA-IAEGNLSLVDALKN---ETSTLK--EQLP 85 ++ + + ++K E++ R + + A + E L E + + Q Sbjct: 80 KIEAEMKKIVK--ENLPIERFTLPREEAIAFMKEKEEPYKVELIEDLPEGAEISFYRQGE 137 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 ++ S K + + L S +L R + + Sbjct: 138 FVDLCAGPHLMSTKDVGKAYKLLNLAGAYWRGSEKNKMLTRIYATAFFKKEELEAYITMM 197 Query: 146 EALGLMDFDRATKL--------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 E D + K +G F L+ L + ++H + GY E+S Sbjct: 198 EEAKKRDHRKLGKELGLFMMHDAGPGFPFFLPKGMQLKNTLLDYWREIH-KKAGYVEIST 256 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 P+++ +G + ++M+ T + + P + +Y+ E + LPLR Sbjct: 257 PIILNRSLWETSGHWDHYKNNMYTTVIDEEDYAIKPMNCPGGVLVYASEPRSYRDLPLRM 316 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS--CAEEILKR 312 L R E G++R F + + E E + + + L Sbjct: 317 GELGLVHRHEKSG---QLHGLMRVRCFTQDDAHIFMTPEQIKDEIKGVATLINEVYTLFG 373 Query: 313 LDLHYRVVSLCTGDLG 328 H + + +G Sbjct: 374 FKYHVELSTRPEDSMG 389 >gi|118580723|ref|YP_901973.1| threonyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|166225474|sp|A1ARE5|SYT_PELPD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|118503433|gb|ABK99915.1| Ser-tRNA(Thr) hydrolase [Pelobacter propionicus DSM 2379] Length = 636 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 6/158 (3%) Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-- 223 V+ + R + + + GY V P +++ E +G + ++M+ T Sbjct: 265 VIWHPKGAMLRTILEDFERREHLKRGYDIVLGPQILKKELWQRSGHYENYRENMYFTEVD 324 Query: 224 -DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 + P + ++ +Y + + LPLR+ L R E G+LR F Sbjct: 325 EQSYGIKPMNCLAHMMIYKSHLRSYRDLPLRYFELGTVHRHERAGVLH---GLLRVRGFT 381 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 + + + E E + +L +++ Y + Sbjct: 382 QDDAHILCAPEQLDGEIKGVLKFVSDVMAIFGFEYEME 419 >gi|166711588|ref|ZP_02242795.1| threonyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 634 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 259 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 319 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E A + Sbjct: 376 VRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413 >gi|163868456|ref|YP_001609665.1| threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476] gi|189083598|sp|A9IVB0|SYT_BART1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|161018112|emb|CAK01670.1| Threonyl-tRNA synthetase [Bartonella tribocorum CIP 105476] Length = 658 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 88/296 (29%), Gaps = 27/296 (9%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNETST 79 R + + +++K R +I++ + R S + + + L N Sbjct: 111 RQQPFTLDDLTIIEKKMREIIQRNKPFRKEI--WSREKARRVFSEKKEFYKVELINSIPD 168 Query: 80 LKEQLPILEKEEH-----EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 ++ + E S ++ + + + AN +L R G + Sbjct: 169 NQDLKIYYQGEWFDLCRGPHMQSTGQIGNAFKLMKVAGAYWRGDANNPMLTRIYGTAFAN 228 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHT 187 + + + + E D R + + + Sbjct: 229 ENDLKAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGMIFWHQKGWKMFQNLINYMRRRL 288 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---------CTTDGRWLIPTSEVSLTN 238 +H Y EV+AP ++ +G + ++MF L P + Sbjct: 289 DDHQYAEVNAPQVLDRSLWEISGHWGWYKENMFKAIPAAEDLDHEHIYALKPMNCPGHVQ 348 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ H + + LP+R R E + G++R F + + +E Sbjct: 349 IFKHGLKSYRDLPIRLAEFGLVHRYEPSGSLH---GLMRVRSFTQDDAHIFCTDEQ 401 >gi|153217256|ref|ZP_01951020.1| threonyl-tRNA synthetase [Vibrio cholerae 1587] gi|124113711|gb|EAY32531.1| threonyl-tRNA synthetase [Vibrio cholerae 1587] Length = 410 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 6/157 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 252 LDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHW 311 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 312 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 G++R F + + E+ E + Sbjct: 372 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMV 405 >gi|300772848|ref|ZP_07082717.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] gi|300759019|gb|EFK55846.1| threonine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] Length = 641 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 101/355 (28%), Gaps = 45/355 (12%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK-E 82 E S+ +++K L K+ E R + S +D + K + Sbjct: 112 EFSSDEFKQIEDKMLELAKRKEVF--ERRAVSKA----------EALDYFTEKGDEYKLD 159 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR--- 139 + LE + S C I N+ S L+R Sbjct: 160 LIKDLEDGKITFYSQGDFTDLCRGPHIPNTGFIKAIKLTNVAGAYWRGDESRKQLTRIYG 219 Query: 140 ----------EHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQ 180 ++ + E D + K G + A L + L Sbjct: 220 VTFPKASELTDYLKFIEEAKKRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRQKLID 279 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEV 234 FM + GY V P + + +G K+ +D F + +L P + Sbjct: 280 FMQRAQL-KAGYEPVVTPHIGHKQLYVTSGHYEKYGEDSFQPIKTPVEGEEFFLKPMNCP 338 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 +Y + K LP+RF +R E + G+ R F + + R + Sbjct: 339 HHCEIYKTKPRSYKDLPVRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCRPDQ 395 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E ++++ + L + + D E W + E Sbjct: 396 VKEEFKKVIDLVLYVFGALGFEDYIAQVSLRDPENRTKYIGSDENWALAERAIIE 450 >gi|289163681|ref|YP_003453819.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150] gi|288856854|emb|CBJ10665.1| Threonyl tRNA synthetase [Legionella longbeachae NSW150] Length = 639 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 80/270 (29%), Gaps = 16/270 (5%) Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG+ ++ + K+E +L +Q E + L Sbjct: 149 KSIGEEYKAKIIADIP--KDEVLSLYKQ-GDFEDLCRGPHVPATGFLKAFKLTKLAGAYW 205 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD-------FDRATKLSGARFSVLT 168 +N +L R G + ++ E D + A V Sbjct: 206 RGDSNNEMLQRIYGTAWADKKALADYLFRLEEAEKRDHRKLGKSLELFHFQDIAPGMVFW 265 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--CTTDGR 226 + + ++ GY E+ P LV +G F D+MF T + Sbjct: 266 HPKGWTIYQELERYMRHRLADFGYQEIRTPQLVDRVLWEKSGHWANFRDEMFVTETENRH 325 Query: 227 WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 + + +++ + + LPLRF+ R E + G++R + + Sbjct: 326 YAVKPMNCPCHVQVFNQGLKSYRDLPLRFSEFGNCHRCEPSGSLH---GLMRVRNMVQDD 382 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDL 315 E+ +E ML + + Sbjct: 383 AHIFCTEDQIQSEVAMMLELVQSVYTDFGF 412 >gi|289642063|ref|ZP_06474216.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] gi|289508136|gb|EFD29082.1| threonyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] Length = 610 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 10/182 (5%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-- 220 + G + E ++ HGY + P + + + Y +G +P +ADD++ Sbjct: 224 PLWLPNGTIVRDELETWAREVER---AHGYQRIVTPHITKSDLYYISGHLPYYADDLYSP 280 Query: 221 -CTTDGRWLIPTSEVSLTNL-YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + + ++ Y + LPLR +R E GM+R Sbjct: 281 IDIDGEEYYLKPMNCPHHHMVYKARPRSYRELPLRLAEYGTVYRYERSG---QLFGMMRV 337 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 F + + E + E ++ +L + + L D + D Sbjct: 338 RGFSQNDAHIYCTREQAIDEFLAVMRLHALYYDKLGIEDYHMVLALRDPKNTEKYHGDEL 397 Query: 339 VW 340 +W Sbjct: 398 MW 399 >gi|270158051|ref|ZP_06186708.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968] gi|269990076|gb|EEZ96330.1| threonyl-tRNA synthetase [Legionella longbeachae D-4968] Length = 639 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 80/270 (29%), Gaps = 16/270 (5%) Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 IG+ ++ + K+E +L +Q E + L Sbjct: 149 KSIGEEYKAKIIADIP--KDEVLSLYKQ-GDFEDLCRGPHVPATGFLKAFKLTKLAGAYW 205 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD-------FDRATKLSGARFSVLT 168 +N +L R G + ++ E D + A V Sbjct: 206 RGDSNNEMLQRIYGTAWADKKALADYLFRLEEAEKRDHRKLGKSLELFHFQDIAPGMVFW 265 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--CTTDGR 226 + + ++ GY E+ P LV +G F D+MF T + Sbjct: 266 HPKGWTIYQELERYMRHRLADFGYQEIRTPQLVDRVLWEKSGHWANFRDEMFVTETENRH 325 Query: 227 WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 + + +++ + + LPLRF+ R E + G++R + + Sbjct: 326 YAVKPMNCPCHVQVFNQGLKSYRDLPLRFSEFGNCHRCEPSGSLH---GLMRVRNMVQDD 382 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDL 315 E+ +E ML + + Sbjct: 383 AHIFCTEDQIQSEVAMMLELVQSVYTDFGF 412 >gi|78044971|ref|YP_360408.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|123770579|sp|Q3ABS6|SYT_CARHZ RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|77997086|gb|ABB15985.1| threonyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 634 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 16/194 (8%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 G F + L F + H GY E+ P+++ E +G + ++M+ Sbjct: 259 GPGFPFFHPKGMVIRNELENFWREKH-RLAGYQEIKTPIILNRELWERSGHWAHYKENMY 317 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + P + +Y +++ + P+R L R E G++R Sbjct: 318 FTKIDDQDYAIKPMNCPGSILVYKNKLHSYREFPIRLAELGLVHRHELSGVLH---GLMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILK--RLDLHYRVVSLCTGDLGFSACKTY 335 F + + E E +++ +E + + H + + +G Sbjct: 375 VRCFTQDDAHIFMLPEQVKDEIIGVINLIDEFYRLFGFEYHVELSTRPENSMG------- 427 Query: 336 DLEVWLAGQNLYRE 349 E+W N +E Sbjct: 428 SDELWELATNSLKE 441 >gi|148555657|ref|YP_001263239.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1] gi|148500847|gb|ABQ69101.1| threonyl-tRNA synthetase [Sphingomonas wittichii RW1] Length = 690 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 47/369 (12%), Positives = 102/369 (27%), Gaps = 48/369 (13%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R E + +++ + R +I + +R S I + +G + + L Sbjct: 138 RG-PFTDEELPAIEAEMRRIIAANKPLRREVWSREQLISRWKQQGETFKAEW----AAEL 192 Query: 81 -KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL--------------- 124 ++ + + + + T + Sbjct: 193 PGDEPLTVYWSGDDWLDMCRGPHLPSTGKLDPQAFKLTRVSGAYWRGDQKNAMLSRIYGT 252 Query: 125 -IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 + + + + E + + D S A+ SV + + Sbjct: 253 GWLNKKQLDAHLTRLEEAAKRDHRRIGQEMDLFHLQSEAQGSVFWHPKGFRLWRALEAYM 312 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN----- 238 GY EV P L+ +G K+ ++MF E + + Sbjct: 313 RRKLDAAGYVEVKTPQLMDARQWEQSGHWGKYRENMFVV-PDEIPNAEEEGPVLSGESEL 371 Query: 239 -------------LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 ++ I + LP+R R+E A G++R QF + + Sbjct: 372 MALKPMNCPAHVLIFRQGIKSYRDLPIRMAEFGCCHRNEPHGALH---GIMRVRQFTQDD 428 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 RE+ E + + + + L + L + E+W + Sbjct: 429 AHIFVREDQLIAEIKDFCDLLDAVYRDLGFEQYAIKLALR----PEKRFGSEEMWDKAEQ 484 Query: 346 LYREISSCS 354 R+ + S Sbjct: 485 TLRDAVAAS 493 >gi|153824261|ref|ZP_01976928.1| threonyl-tRNA synthetase [Vibrio cholerae B33] gi|126518216|gb|EAZ75441.1| threonyl-tRNA synthetase [Vibrio cholerae B33] Length = 345 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 10/197 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V H + I +E+GY EV PL++ +G Sbjct: 138 LDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDRVLWERSGHW 197 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 K+AD MF T + P + +++ + + LPLR R+E + Sbjct: 198 DKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 257 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E+ E + + VV L T Sbjct: 258 H---GIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVKLSTR---- 310 Query: 330 SACKTYDLEVWLAGQNL 346 + E+W + Sbjct: 311 PEKRVGSDEIWDKSEQA 327 >gi|289668713|ref|ZP_06489788.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 634 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 259 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 319 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E A + Sbjct: 376 VRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413 >gi|256422752|ref|YP_003123405.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] gi|256037660|gb|ACU61204.1| threonyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] Length = 646 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 78/320 (24%), Gaps = 25/320 (7%) Query: 50 RRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSS------LKKLIS 103 R S + LK+ + + I Sbjct: 136 ERREVSKADAEKYFTEKNDEYK--LELIRDLKDGSITFYTQGNFTDLCRGPHIPNTGFIK 193 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK---LS 160 I + + +L R G E+ + E D + K L Sbjct: 194 AIKLTNIAGAYWRGNEKNKMLTRIYGITFPTQKELDEYLHLVEEAKKRDHRKLGKELELF 253 Query: 161 GARFSVLTGHLAHLERALG-----QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 V G L + Q + E GY V P + +G K+ Sbjct: 254 TFSEKVGLGLPLWLPKGAMLRERLQSFLQKAQIESGYMPVVTPHIGNKNLYITSGHYEKY 313 Query: 216 -ADDMFCTTDGRWLIPTSEVSLTNLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSAG 269 D + + EI K LP+RF +R E Sbjct: 314 GKDSFQPIHTPEEGEEFMLKPMNCPHHCEIYKSSPKSYKDLPVRFAEFGTVYRYEQHG-- 371 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 + G+ R F + + R + E +++ + + L+ + D Sbjct: 372 -ELHGLTRVRGFTQDDAHLFCRPDQVKEEFCKVIDLVLYVFQSLNFTDYTAQISLRDQED 430 Query: 330 SACKTYDLEVWLAGQNLYRE 349 A E W + E Sbjct: 431 RAKYIGSDENWNLAEQAIIE 450 >gi|75676225|ref|YP_318646.1| threonyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] gi|74421095|gb|ABA05294.1| Ser-tRNA(Thr) hydrolase [Nitrobacter winogradskyi Nb-255] Length = 686 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 96/317 (30%), Gaps = 28/317 (8%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDI------RARRNSNSAQIGQAIAEGNLSLVDAL- 73 R+ E ++++K R +I + + R + G+A + LVDA+ Sbjct: 132 RNEPFSVEDFAAIEKKMREIIARDQPFTKDVWDREKTKQVFRDKGEAFK---VELVDAIP 188 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 NE + Q + +S K+ + + + +N +L R G + Sbjct: 189 GNEPIRIYYQGDWFDLCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFA 248 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS----- 188 + + E D + + G A G + + Sbjct: 249 NQADLDAYLKQIEEAEKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQAVIAYMRRR 308 Query: 189 -EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEVSLTN 238 Y EV+AP ++ +G + ++MF + P + Sbjct: 309 LAEDYDEVNAPQMLDKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFTIKPMNCPGHVQ 368 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ H + + LPLR R E A G++R F + + EE E Sbjct: 369 LFKHGLKSYRDLPLRLAEFGVVHRYEPSGA---MHGLMRVRGFTQDDAHVFCTEEQLADE 425 Query: 299 HERMLSCAEEILKRLDL 315 ++ Sbjct: 426 CLKINELILSTYADFGF 442 >gi|78048351|ref|YP_364526.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927169|ref|ZP_08188432.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas perforans 91-118] gi|123743902|sp|Q3BRT7|SYT_XANC5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78036781|emb|CAJ24474.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542482|gb|EGD13961.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas perforans 91-118] Length = 634 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 259 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 319 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E A + Sbjct: 376 VRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413 >gi|289661762|ref|ZP_06483343.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 636 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 261 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 320 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 321 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 377 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E A + Sbjct: 378 VRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 415 >gi|152993995|ref|YP_001359716.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1] gi|166225510|sp|A6QD00|SYT_SULNB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|151425856|dbj|BAF73359.1| threonyl-tRNA synthetase [Sulfurovum sp. NBC37-1] Length = 604 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 12/184 (6%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 SGA A L L Q + H Y V P +++ + +G + ++M Sbjct: 227 SGAGLPFWMPQGAKLRYKLEQILHKAHL-VRDYEPVRGPEILKADMWRTSGHYACYGENM 285 Query: 220 FCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + T + P + + ++ + LP+++ R E G+L Sbjct: 286 YLTEIDGQEYGIKPMNCIGHIQIFKQTQKSYRDLPVKYYEYGVVHRHEKSGVLH---GLL 342 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R +F + + E +E ++ + ++K + Y + D Sbjct: 343 RVREFTQDDAHIFCAPEQIASEVLEVVEFVDSVMKLFEFEYTMEISTK-----PEKAIGD 397 Query: 337 LEVW 340 EVW Sbjct: 398 DEVW 401 >gi|300726434|ref|ZP_07059882.1| threonine--tRNA ligase [Prevotella bryantii B14] gi|299776282|gb|EFI72844.1| threonine--tRNA ligase [Prevotella bryantii B14] Length = 654 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 97/358 (27%), Gaps = 44/358 (12%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 + + ++ K + L KK E +I +A + K + Sbjct: 110 KGVTISENDFPKIEAKMKELAKKDEA------VVRKEIAKA------DALKEFKADGQDY 157 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPL---------------EEVPIGTSANENILI 125 K + L+ + + + + + + P A + Sbjct: 158 KCEHIDLDLADGSITTYTQGNFTDLCKGPHLVSTGDIKAVKITSVAGAFWRGDAKREQMT 217 Query: 126 RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS---VLTGHLAHLERALGQFM 182 R G + E+ + E D + K V G L + + Sbjct: 218 RIYGISFPKKKMLDEYLVMLEEAKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTQLRL 277 Query: 183 IDLHTS-----EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPT 231 + Y EV P + +G + D F L P Sbjct: 278 RLQELLRRVLKPYNYQEVITPGIGSKNLYITSGHWAHYGKDAFQPIHTPEEDEEYMLKPM 337 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 + +Y+ + K LPLR FR E + G+ R F + + R Sbjct: 338 NCPHHCEIYARKPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVR 394 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + E E + +++ + + D + E+W QN RE Sbjct: 395 PDQVKAEFENNIDIIQKVFSIFGFNDYEAQISLRDPKDTEKYIGSDEIWEESQNAIRE 452 >gi|238916041|ref|YP_002929558.1| prolyl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|259511595|sp|C4Z1D7|SYP_EUBE2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|238871401|gb|ACR71111.1| prolyl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 479 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 72/197 (36%), Gaps = 13/197 (6%) Query: 219 MFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + + + PTSE + Y EI + LP + R E ++TR LR Sbjct: 103 LNPLQERMCVRPTSETLFCDFYKDEIQSYRDLPKVYNQWCSVVRWE-----KETRPFLRS 157 Query: 279 HQFWKCELVSITREEDSFTEHERMLSC--AEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 +F E + + + + A+ + L + + A TY Sbjct: 158 REFLWQEGHTAHATAEEAEARTQQMLNLYADFCEEVLAIPVIKGRKTDKEKFAGAEATYT 217 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH-TLNGSGVAVGRCLIA 395 +E + + + G+ ++ +Y D ++K LK+ H T G+ R + A Sbjct: 218 IEALM-HDGKALQSGTSHNFGDGFAKAFGIQYTDKDNK-LKYVHQTSWGT---TTRLIGA 272 Query: 396 ILENYLNADGSVTIPTV 412 ++ + + G V P V Sbjct: 273 VIMTHGDDSGLVLPPKV 289 >gi|242278821|ref|YP_002990950.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] gi|259516380|sp|C6BRH1|SYT_DESAD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|242121715|gb|ACS79411.1| threonyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] Length = 642 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 7/190 (3%) Query: 150 LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 +D GA ++ A + L F H + GY V PL+++ E + Sbjct: 246 QLDLFSVNPEVGAGMTIWHPKGALIRAILEDFERKEHL-KRGYQFVQGPLILKRELWEKS 304 Query: 210 GQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 G + ++M+ T + P + +S ++ + + LP R+ R E Sbjct: 305 GHYDNYRENMYFTEIDEQSYGIKPMNCLSHMLVFKSRLRSYRDLPQRYFEHGVVHRHEKS 364 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 G+LR F + + I R + E + +++ Y + Sbjct: 365 GVLH---GLLRVRTFTQDDAHLICRPDQLRDEIIGVAKFVGDVMGLFGFEYEAEVSTKPE 421 Query: 327 LGFSACKTYD 336 + + +D Sbjct: 422 KAIGSDEDWD 431 >gi|93007241|ref|YP_581678.1| threonyl-tRNA synthetase [Psychrobacter cryohalolentis K5] gi|123264359|sp|Q1Q809|SYT_PSYCK RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|92394919|gb|ABE76194.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Psychrobacter cryohalolentis K5] Length = 644 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 54/171 (31%), Gaps = 6/171 (3%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + ++GY E+ P +V +G +A Sbjct: 254 HMQEQAPGMVFWHANGWTIYQVLEQYMRKVQHDNGYEEIKTPQIVDRSLWERSGHWGNYA 313 Query: 217 DDMFCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 +MF T + + + +++ + + LPLR R+E + Sbjct: 314 TNMFTTSSENRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH--- 370 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + + E + + + ++ L T Sbjct: 371 GLMRVRGFTQDDAHIFCTQSQIQQEVADFIKLTLAVYEDFGFDKIIMKLST 421 >gi|21231898|ref|NP_637815.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767974|ref|YP_242736.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|188991100|ref|YP_001903110.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. B100] gi|25453287|sp|Q8P7Z2|SYT_XANCP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|81306049|sp|Q4UW57|SYT_XANC8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|229558465|sp|B0RRG9|SYT_XANCB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21113622|gb|AAM41739.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573306|gb|AAY48716.1| threonyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|167732860|emb|CAP51054.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 636 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 261 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 320 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 321 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 377 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E E A + Sbjct: 378 VRGFTQDDGHVFCLESQIEAEVTAFHQQALAVYTAFGF 415 >gi|325917697|ref|ZP_08179888.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] gi|325536091|gb|EGD07896.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] Length = 634 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 259 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 319 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E E A + Sbjct: 376 VRGFTQDDGHVFCLESQIEAEVTAFHQQALAVYTAFGF 413 >gi|240143521|ref|ZP_04742122.1| threonine--tRNA ligase [Roseburia intestinalis L1-82] gi|257204557|gb|EEV02842.1| threonine--tRNA ligase [Roseburia intestinalis L1-82] gi|291540396|emb|CBL13507.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Roseburia intestinalis XB6B4] Length = 591 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 97/333 (29%), Gaps = 33/333 (9%) Query: 46 DIRARRNSNSAQIGQAIAEGNLSLVDALKN-ETSTLKEQLPILEKEEHEVCSSLKKLISC 104 I + G+ I +S +AL+ + K L ++ + Sbjct: 62 AIEKEMKKVCKE-GKKIYRREISKAEALELFKDDEYKLDLIDGLEDGNISVYDQGDFTDL 120 Query: 105 IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG------------------- 145 ++ + + K + H+ + + + Sbjct: 121 CRGPHVDNTKLCKNFKLIKYSGVYWKGDANNHVMQRIYGVCFPTAEELEEHLKLLEEAKD 180 Query: 146 ----EALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 + M + L G + + + L ++ + GY V P + Sbjct: 181 RDHRKIGKEMHLFMSDDLVGRGLPMFLPKGYTVWQELENYIKAKE-RKLGYLHVMTPCVG 239 Query: 202 RDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT----NLYSHEIIESKSLPLRFTTL 257 +G + ++MF + +Y++ + K LP+R + Sbjct: 240 TVNLYKTSGHWDHYKENMFPAMEVEGESFVLRPMNCPHHMMIYANRMHSYKDLPIRIGEI 299 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 A FR EA +G+ R F + + E +E +++ + K ++ Sbjct: 300 AHDFRFEASG---TLKGIERGRHFCQNDAHLFVTPEQIESEFAKVVELIFDTYKDFNITD 356 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 L D D E+W +N R++ Sbjct: 357 YRCVLSLRDPEDKVKYHDDDEMWNNAENALRKV 389 >gi|21243325|ref|NP_642907.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|25453288|sp|Q8PJE1|SYT_XANAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21108867|gb|AAM37443.1| threonyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 634 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 259 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 319 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E A + Sbjct: 376 VRGFTQDDGHVFCLEPQIESEVTAFHQQALAVYTAFGF 413 >gi|294667581|ref|ZP_06732796.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602701|gb|EFF46137.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 634 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 259 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 319 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E A + Sbjct: 376 VRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413 >gi|162452628|ref|YP_001614995.1| hypothetical protein sce4352 [Sorangium cellulosum 'So ce 56'] gi|161163210|emb|CAN94515.1| thrS [Sorangium cellulosum 'So ce 56'] Length = 753 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 8/160 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA + L + +H E GY V +P + + + +G + + M Sbjct: 373 IGAGLVMWLPKGGLLRTIIEDQWRKMHLEE-GYDIVYSPHIAKADLWKTSGHWDFYREGM 431 Query: 220 FCTT----DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 F P + + + P+R L +R EA G+ Sbjct: 432 FSPMSVDGHDYCCKPMNCPFHILMVKSRTRSYREFPMRLAELGTVYRYEAAG---VMHGL 488 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + R + E R+L ++L+ Sbjct: 489 MRVRGFTQDDAHLFCRADQVEQEIHRVLRFILKMLRTFGF 528 >gi|325919878|ref|ZP_08181868.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] gi|325549662|gb|EGD20526.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] Length = 634 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 259 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 319 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E E A + Sbjct: 376 VRGFTQDDGHVFCLESQIEAEVTAFHQQALAVYTAFGF 413 >gi|257784431|ref|YP_003179648.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469] gi|257472938|gb|ACV51057.1| threonyl-tRNA synthetase [Atopobium parvulum DSM 20469] Length = 588 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 7/164 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 G + L AL ++ ++ GY EV PL++ +G + ++M Sbjct: 211 FGPGSPFWLPNGMALRNALTEYWHEMQA-RFGYQEVQTPLILSRSLWETSGHWDHYKENM 269 Query: 220 FCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + TT + + P + +Y + + LP++ R E A G+ Sbjct: 270 YTTTVDEEDFAIKPMNCPGACLIYKSKPRSYRDLPMKLAEAGLDHRYEMKGALH---GLF 326 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 R +F + + R + + + YRV Sbjct: 327 RVREFTQDDAHLFIRPDQITEQVTDASHLITAYYAQFGFPYRVE 370 >gi|160894708|ref|ZP_02075483.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50] gi|156863642|gb|EDO57073.1| hypothetical protein CLOL250_02259 [Clostridium sp. L2-50] Length = 591 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 81/245 (33%), Gaps = 11/245 (4%) Query: 110 LEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 I K R+H +IG+ + L D L G + Sbjct: 152 HVMQRIYGVCFPTAEELEEHLKLLEEAKDRDHRKIGKEMNLFMSDD---LVGRGLPMFLP 208 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLI 229 + + L ++ + + GY V P + +G + D+MF + Sbjct: 209 KGYIVWQELENYIKNKE-RKLGYRHVMTPCVGTVNLYKTSGHWDHYKDNMFPAMEVEGES 267 Query: 230 PTSEVSLT----NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 +Y++++ K LP+R +A FR EA +G+ R F + + Sbjct: 268 FVLRPMNCPHHMMIYANKMHSYKDLPIRIGEIAHDFRFEASG---TLKGIERGRHFCQND 324 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 E +E ++++ + K ++ L D D E+W ++ Sbjct: 325 AHLFVTPEQIESEFKQVVDLIFDTYKDFNITDYRCVLSLRDPEDKVKYHDDDEMWNTAED 384 Query: 346 LYREI 350 R++ Sbjct: 385 ALRKV 389 >gi|255019923|ref|ZP_05291997.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] gi|254970582|gb|EET28070.1| Threonyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] Length = 454 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 62/181 (34%), Gaps = 10/181 (5%) Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 E + +D + +G A + + + + H GY + P Sbjct: 49 ERRDHRRIGRDLDLFSIQEDAGGGLVFWHPQGAQIRKVIEDYWRQAHLRG-GYELLYTPH 107 Query: 200 LVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRF 254 + ++ + +G +AD MF + P + +Y + + + LP+R+ Sbjct: 108 IAHEKLWFTSGHKDFYADSMFQPMEDEG-EPYQLKPMNCPFHILIYKNTLRSYRDLPIRW 166 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 L +R E A G++R F + + R + E +L+ + IL Sbjct: 167 AELGTVYRHEMSGALH---GLMRVRGFTQDDAHIFCRPDQIEAEIAGVLALTQNILGTFG 223 Query: 315 L 315 Sbjct: 224 F 224 >gi|302386675|ref|YP_003822497.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302197303|gb|ADL04874.1| threonyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 653 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 116/354 (32%), Gaps = 32/354 (9%) Query: 23 LEPQS-----EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNE 76 + E + ++++ + +IK E ++ R + + E L + Sbjct: 103 YDFDIPSFSREDLDKIEDEMKKIIK--EGVKIERFTLPREEAIKFMEEKGEPYKVELIQD 160 Query: 77 TSTLKEQLPILEKEEHEVCS----SLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 E + E ++C+ K I + S +L R G Sbjct: 161 LPEGAEISFYRQGEFTDLCAGPHLMNTKSIKAYKLISSSGAYWRGSEKNAMLTRVYGTAF 220 Query: 133 SAIHLSREHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMI 183 + EH E ++ D ++ + + G +L A + + L +++ Sbjct: 221 AKKEELNEHLEYLASIKNRDHNKLGRDLEIFATVDVIGQGLPLLMPKGAKIVQTLQRWIE 280 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTN 238 D + GY PL+ + + + + + MF T D + + Sbjct: 281 DEE-EKRGYMRTKTPLMAKKDLYIISDHWDHYKEGMFVLGNEETDDEVFALRPMTCPFQY 339 Query: 239 L-YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 Y + LP R+ + FR+E + G+ R QF E I R + Sbjct: 340 YVYKQSQKSYRDLPCRYGETSTLFRNEDSG---EMHGLTRVRQFTISEGHLIVRPDQIEE 396 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 E + + A+ L L L V + D + E+W +++ R+I Sbjct: 397 EFKGCVDLAKYCLTTLGLEGDVTYRMSKWDPNNADHYLGTPEMWDEVEDMMRKI 450 >gi|294626197|ref|ZP_06704803.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599549|gb|EFF43680.1| threonyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 634 Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + + GY EV P ++ +G + D MF Sbjct: 259 EAPGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSGHWDNYQDAMF 318 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ +++ + + LP+R+ R+E A G+LR Sbjct: 319 FTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGACHRNEPSGALH---GILR 375 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E A + Sbjct: 376 VRGFTQDDGHVFCLESQIESEVTAFHQQALAVYTAFGF 413 >gi|332290253|ref|YP_004421105.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179] gi|330433149|gb|AEC18208.1| threonyl-tRNA synthetase [Gallibacterium anatis UMN179] Length = 643 Score = 50.9 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 57/191 (29%), Gaps = 10/191 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + ++ Y EV P ++ TG Sbjct: 251 LDLYHMQEEAPGMVFWHNDGWTIFRELETFVRAKLKQYDYQEVKGPFMMDRVLWEKTGHW 310 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + D MF T + P + +++ + + LPLR R+E + Sbjct: 311 QNYGDLMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + E +E + +I V L T Sbjct: 371 H---GLMRVRGFTQDDAHIFCTENQIESEVTSCIKMVYDIYSTFGFTDIYVKLSTR---- 423 Query: 330 SACKTYDLEVW 340 + E+W Sbjct: 424 PEHRIGSDEMW 434 >gi|71892130|ref|YP_277862.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796236|gb|AAZ40987.1| threonyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 408 Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 A V + + +I E+ Y EV +P ++ TG Sbjct: 17 LHLYHTQKDAPGMVFWHQNGWILLQELKKIIRTQLKEYKYQEVKSPTMINHTLWKKTGHW 76 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + +F T+ + P + +++ I K LP R R+E + Sbjct: 77 DNYHEHIFTTSSESHEYCIKPMNCPGHIQIFNQGIKSYKDLPYRIAEFGNCHRNEPSGSL 136 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R +F + + + F E + +I Sbjct: 137 H---GLMRTREFTQDDGHIFCTKTQIFDELNHCIKMMYDIYNTFGF 179 >gi|254517592|ref|ZP_05129648.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226911341|gb|EEH96542.1| threonyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 645 Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 65/175 (37%), Gaps = 10/175 (5%) Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVS 235 L Q ++ + GY P + +++ +G + D MF + + + Sbjct: 275 QLLQRWVEDEEEKRGYVFTKTPSMSKNDLFKVSGHWDHYKDGMFVLGDEDKDPEVMALRP 334 Query: 236 LTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 +T +Y+ E + LP+R+ + +R+EA + G++R QF + + Sbjct: 335 MTCPFQYTIYNAEQHSYRELPIRYAETSTLYRNEASG---EMHGLIRVRQFTLSDGHIVC 391 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQ 344 R + E + + I+ L + + + D + + E W Q Sbjct: 392 RPDQIEEEFKGCVELINHIMSTLGIDGDISFRFSKWDPNNTDKYINNPEAWEETQ 446 >gi|114566616|ref|YP_753770.1| threonyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318333|sp|Q0AY05|SYT_SYNWW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114337551|gb|ABI68399.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 635 Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 90/315 (28%), Gaps = 34/315 (10%) Query: 28 EYILSLDEKNRILIKKIEDIRAR----RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E +++E+ + +I +A R S + L E Sbjct: 115 EDFAAIEEEMKRII------KADYPIVRKELSREEALQFFSERSEDYK--LELIEDLPED 166 Query: 84 LPILEKEEHEVCSSLKKLISC-------IPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 I ++ E I + L S +L R Sbjct: 167 AVISTYQQGEFVDLCAGPHLPSTGRLKAIKVMSLAGAYWRGSERNPMLQRVYATSFPKKS 226 Query: 137 LSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTS 188 + ++ + E D R + G F L L F + H Sbjct: 227 MLDDYLQKLEEAKKRDHRRLGRELGLFVVLDEGPGFPFFLPKGMVLRNELENFWREEH-R 285 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVSLTNLYSHEII 245 + GY E+ P+++ E +G + D+M+ TT + P + +Y + Sbjct: 286 KAGYQEIRTPIILSRELWERSGHWDHYKDNMYFTTIDEGDYAIKPMNCPGGLLVYKQNLH 345 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 K LPLR + R E G++R F + + E E + ++ Sbjct: 346 SYKELPLRMGEMGLVHRHEMSGVLH---GLMRVRAFTQDDAHIFMLPEQIIDEIKGVMDL 402 Query: 306 AEEILKRLDLHYRVV 320 + Y V Sbjct: 403 VDRFYSLFGFPYHVE 417 >gi|116630042|ref|YP_815214.1| threonyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|238853770|ref|ZP_04644136.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4] gi|282851336|ref|ZP_06260701.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311110329|ref|ZP_07711726.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22] gi|122273021|sp|Q041U6|SYT_LACGA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116095624|gb|ABJ60776.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|238833579|gb|EEQ25850.1| threonine--tRNA ligase [Lactobacillus gasseri 202-4] gi|282557304|gb|EFB62901.1| threonine--tRNA ligase [Lactobacillus gasseri 224-1] gi|311065483|gb|EFQ45823.1| threonine--tRNA ligase [Lactobacillus gasseri MV-22] Length = 643 Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 66/384 (17%), Positives = 124/384 (32%), Gaps = 54/384 (14%) Query: 4 IQWIRQNPEHLDIALKKRHLEP------QSEY---ILSLDEKNRILIKKIEDIRARRNSN 54 + +R L A+ KR +++ + D++++I I ++ ++ Sbjct: 69 LNILRATAAFLLEAIAKRKYPELRLGMHEADEGGFFVDTDKEDQIKITELPELE------ 122 Query: 55 SAQIGQAIAEGNLSLVDALKN-------ETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 ++ +AI G ++K + K L EK+E V + Sbjct: 123 -KEMQKAIKNGEKIEYTSMKKSELEDIFKDDQFKLDLLKDEKDEVAVYKLGDFVDFGFEA 181 Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL-------- 159 + I ++ K S L R +D D + Sbjct: 182 LLPNTGKIKNFKLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKERDHR 241 Query: 160 --------------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEA 205 GA A + R + ++++D ++ GY V P+L+ +A Sbjct: 242 TIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVAD-GYEHVYTPVLMNVDA 300 Query: 206 MYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +G + DDMF D L P + S +Y H I + LP+R L Sbjct: 301 YKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMM 360 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 R E A G+ R + + + + E ++L ++ K D+ Sbjct: 361 HRYEKSGALS---GLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDYYF 417 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQ 344 L D + + E+W Q Sbjct: 418 RLSYRDPKNTDKYYANDEMWEKSQ 441 >gi|332686097|ref|YP_004455871.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] gi|332370106|dbj|BAK21062.1| threonyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] Length = 647 Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 65/201 (32%), Gaps = 9/201 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D ++ G+ A + R + +++ D S GY V P++ + Sbjct: 249 KELDLFMISQEVGSGLPFWLPKGATIRRTIERYITDKEISL-GYQHVYTPIMANVDLYKT 307 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH-----EIIESKSLPLRFTTLAPSFRS 263 +G + +DMF D + + + + LP+R L R Sbjct: 308 SGHWAHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKDTVHSYRELPIRIAELGMMHRY 367 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 E A G+ R + + + R + E +R+L + K ++ L Sbjct: 368 EKSGALS---GLQRVREMTLNDGHTFVRPDQIKEEFKRILELMLAVYKDFNITDYKFRLS 424 Query: 324 TGDLGFSACKTYDLEVWLAGQ 344 D D +W Q Sbjct: 425 YRDPNNKDKYFDDDAMWTKAQ 445 >gi|87303299|ref|ZP_01086092.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701] gi|87282194|gb|EAQ74155.1| Threonyl-tRNA synthetase, class IIa [Synechococcus sp. WH 5701] Length = 603 Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 84/315 (26%), Gaps = 42/315 (13%) Query: 48 RARRNSNSAQIGQAIAEG---------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 A + ++G+ IA +K + K ++ +E + + Sbjct: 67 EADLKAIKKEMGKIIARKLPLQRLEVSREQAEARIKAQNEPYKLEILAGIQEPITLYTLG 126 Query: 99 KKLISCIPNVPL-----------------------EEVPIGTSANENILIRSVGKKPSAI 135 + + +E ++ + Sbjct: 127 DEWWDLCAGPHVANTSELNPKAFELESVAGAYWRGDETRAQLQRIYGTAWQTPEQLAEYK 186 Query: 136 HLSREHFEIGEALGLMDFD--RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 H +E D +GA A + + F H GY Sbjct: 187 HRKQEALRRDHRRLGTDLQLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAH-FAAGYD 245 Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKS 249 + P + +G + +++ MF + + + + Sbjct: 246 LLYTPHVADLSLWKTSGHLDFYSESMFGPMQVDERQYQLKPMNCPFHVLTYASTLRSYRE 305 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R+ L +R E G++R F + + E E +L+ E I Sbjct: 306 LPIRWAELGTVYRYERPG---VMHGLMRVRGFTQDDAHIFCLPEQIGDEILGVLNLTETI 362 Query: 310 LKRLDLHYRVVSLCT 324 L D H V+L T Sbjct: 363 LSSFDFHTYEVNLST 377 >gi|332701961|ref|ZP_08422049.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] gi|332552110|gb|EGJ49154.1| threonyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] Length = 655 Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 6/161 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 V+ L R + + GY V P L++ E +G + +M+ T Sbjct: 260 AGMVIWHPKGALIRTIIEDFERKEHLRRGYHIVQGPQLLKRELWERSGHYEHYRQNMYFT 319 Query: 223 TDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 ++ +Y ++ + LPLR L R E G+LR Sbjct: 320 EIDEQAYGVKPMNCLSHMLIYKSKVRSYRDLPLRLFELGVVHRHEKSGVLH---GLLRVR 376 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 QF + + I R + E ++ +++ ++ Sbjct: 377 QFTQDDAHIICRPDQLEDEIIGVVHFVRDVMGIFGFNFEAE 417 >gi|221194423|ref|ZP_03567480.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626] gi|221185327|gb|EEE17717.1| threonyl-tRNA synthetase [Atopobium rimae ATCC 49626] Length = 588 Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 52/164 (31%), Gaps = 7/164 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 G + + AL + ++ + Y EV P ++ +G + ++M Sbjct: 211 FGPGSPFWLPNGMAVRNALTDYWHEMMV-KFNYEEVLTPQILSRSLWETSGHWDHYKENM 269 Query: 220 FCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + T + + P + +Y + + LPL+ R E A G+ Sbjct: 270 YTTSVDEEDFAIKPMNCPGACLIYKNRPRSYRDLPLKLAEAGLDHRYEMKGALH---GLF 326 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 R +F + + R + + + YRV Sbjct: 327 RVREFTQDDAHIFIRPDQITEQVADASHLITAYYAQFGFPYRVE 370 >gi|89101224|ref|ZP_01174050.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89084053|gb|EAR63228.1| threonyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 408 Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 76/211 (36%), Gaps = 8/211 (3%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + +D ++ G + A + R + ++++D GY V P++ Sbjct: 10 DHRKIGKELDLFMTSQKVGQGLPMWLPKGATIRRIVERYIVDKE-QRLGYEHVYTPVMAN 68 Query: 203 DEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 E +G + +DMF + L P + +Y + I + LP+R L Sbjct: 69 VELYKTSGHWDHYQEDMFPVMEMDNEELVLRPMNCPHHMMIYKNSIHSYRELPIRIAELG 128 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R E A G+ R + R + E +R++ E+ K ++ Sbjct: 129 TMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEEFKRVVHLILEVYKDFNIEDY 185 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 L D + D E+W Q++ +E Sbjct: 186 SFRLSYRDPQDTEKYFNDDEMWEKAQSMLKE 216 >gi|152989860|ref|YP_001355582.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2] gi|151421721|dbj|BAF69225.1| threonyl-tRNA synthetase [Nitratiruptor sp. SB155-2] Length = 613 Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 95/308 (30%), Gaps = 34/308 (11%) Query: 35 EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 K ++ I + E ++ + + + LK+ S + + E+ Sbjct: 100 AKRKLDITRYEIPKSE--------AIEKFKEDDLKQEVLKSIPSDVVSIYKQGDFEDLCR 151 Query: 95 CSS--LKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 K + + +G + +L R G + +++ + E D Sbjct: 152 GPHVPNTKYLKHFKLTRVAGAYLGGDETKEMLTRIYGVAFADKKSLKDYLTMIEEAKKRD 211 Query: 153 FDRATKLSG---------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRD 203 + A + A L L + H + GY V P +++ Sbjct: 212 HRKLGSEMELFMFSEEVGAGLPIWLPKGARLRSKLESLLFAAH-RKRGYEPVRGPEILKS 270 Query: 204 EAMYGTGQIPKFADDMFCT-----------TDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 + +G + ++M+ T + P + V +Y + + LPL Sbjct: 271 DLWKKSGHYQNYKENMYFTEICDDETKKETCVEYGIKPMNCVGHIMIYKSKKRSYRELPL 330 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 +F R E G+ R +F + + + E +L +EI++ Sbjct: 331 KFFEYGVVHRHEKSGVLH---GLFRVREFTQDDAHIFCKPEQIKDIVIEVLGFVDEIMRS 387 Query: 313 LDLHYRVV 320 + Y + Sbjct: 388 FNFKYEME 395 >gi|71066652|ref|YP_265379.1| threonyl-tRNA synthetase [Psychrobacter arcticus 273-4] gi|123775558|sp|Q4FPW3|SYT_PSYA2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|71039637|gb|AAZ19945.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Psychrobacter arcticus 273-4] Length = 644 Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 6/171 (3%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 A V + + + ++GY E+ P +V +G +A Sbjct: 254 HMQEQAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYEEIKTPQIVDRSLWERSGHWGNYA 313 Query: 217 DDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 +MF T+ + + + +++ + + LPLR R+E + Sbjct: 314 TNMFTTSSEKRDYAVKPMNCPCHVQVFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLH--- 370 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + + E + + + + ++ L T Sbjct: 371 GLMRVRGFTQDDAHIFCTQSQIQQEVADFIKLTLAVYEDFGFNNIIMKLST 421 >gi|149276293|ref|ZP_01882437.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp. BAL39] gi|149232813|gb|EDM38188.1| threonine--tRNA ligase (threonine tRNA synthetase) [Pedobacter sp. BAL39] Length = 641 Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 93/336 (27%), Gaps = 25/336 (7%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETSTLKE 82 E S+ +++ K L K+ E R S Q E L K Sbjct: 112 EFSSDDFKAIETKILELAKQKEVF--ERKDISKADAIQYFTEKGDEYKLDLLEGLEDGKI 169 Query: 83 QLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 + + + + + L R G Sbjct: 170 TFYSQGEFTDLCRGPHIPNTGFVKAVKLMNVAGAYWRGDETRKQLTRIYGVTFPKASELT 229 Query: 140 EHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 E+ + E D + K G + A L L QF+ Sbjct: 230 EYLHMIEEAKKRDHRKLGKELELFAFSEKVGMGLPLWLPKGAALRERLVQFLTRAQAKS- 288 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSHEI 244 GY +V P + +G K+ D F + +L P + +Y + Sbjct: 289 GYEQVVTPHIGHKNLYITSGHYEKYGKDSFQPIKTPQEGEEFFLKPMNCPHHCEIYKVKP 348 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 K LPLRF +R E + G+ R F + + R + E ++++ Sbjct: 349 RSYKDLPLRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCRPDQVKEEFKKVID 405 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + K L + + + D A E W Sbjct: 406 LVLYVFKSLGFNDYIAQVSLRDPDNKAKYIGSDENW 441 >gi|160871539|ref|ZP_02061671.1| threonyl-tRNA synthetase [Rickettsiella grylli] gi|159120338|gb|EDP45676.1| threonyl-tRNA synthetase [Rickettsiella grylli] Length = 642 Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 49/166 (29%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + I + Y E+ P L+ + +G Sbjct: 250 LDLFHVQEEAPGMVFWHPRGWTVYQRIEQYIRSCLKKAAYQEIQTPQLLARQLWEKSGHW 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KF +MF T +S +++ I + LPLR R+E A Sbjct: 310 DKFFKEMFTTVTENTEFAIKPMSCPGHIQIFNQGIKSYRDLPLRLAEFGSCHRNEPSGAL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G+LR F + + E+ +E + + Sbjct: 370 H---GLLRVRGFVQDDGHIFCTEDQIQSEVSAFIDLLYNVYADFGF 412 >gi|288928013|ref|ZP_06421860.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] gi|288330847|gb|EFC69431.1| threonine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] Length = 654 Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 89/354 (25%), Gaps = 44/354 (12%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 ++EK R K+ E I R S + K + K Sbjct: 111 GTPISENDFPKIEEKMREFAKRDEAI--VRREVSKS----------DALKEFKEDGQEYK 158 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEV--PIGTSANENILIRSVGKKPSAI---- 135 + L+ E+ + + + + + P PI ++ Sbjct: 159 CEHIDLDLEDGTISTYSQGAFTDLCRGPHLMSTGPIKAIKLTSVAGAFWRGDAQKDQLTR 218 Query: 136 ---------HLSREHFEIGEALGLMDFDRATKLSGARFS---VLTGHLAHLERAL----- 178 + E+ + E D + K V G L + Sbjct: 219 IYGITFPKKKMLDEYLVMLEEAKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLR 278 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLT 237 Q M+ GY EV P + +G + D + Sbjct: 279 LQNMLRKIQKRFGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMN 338 Query: 238 NLYS-----HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + + K LPLR +R E + G+ R F + + R Sbjct: 339 CPHHCEVFAWKPRSYKDLPLRIAEFGTVYRYEKSG---ELHGLTRVRSFTQDDAHIFCRP 395 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 E E R++ + + K + D + EVW + Sbjct: 396 EQVKNEFLRVMDIIQAVFKIFHFDDFEAQISLRDPKNTTKYIGSDEVWEESEQA 449 >gi|91772258|ref|YP_564950.1| prolyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] gi|121689406|sp|Q12ZC6|SYP_METBU RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|91711273|gb|ABE51200.1| Prolyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] Length = 478 Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 106/292 (36%), Gaps = 25/292 (8%) Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 PS + S + + + +MD K V + R + + L +H Sbjct: 11 PSKENFSEWYNGMLQIAEIMDVRYPVK----GSYVWYPFGFSIRRNVYDIIRGLLDKDHQ 66 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------TDGRWLIPTSEVSLTNLYSHE 243 + L+ +E M I F ++++ L PTSE ++ +Y Sbjct: 67 -ETLFPLLIPENEFMKEAEHIKGFEEEVYWVLNGGTTPLDVKLALRPTSETAIYPMYRLW 125 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHER 301 + LPL+ + +FR E + TR ++R + + +++ ++ E Sbjct: 126 VRSHADLPLKLYQIVNTFRYE----TKHTRPLIRLREITSFKEAHTVHATWDEAASQVEE 181 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 + E KRL + + D A T ++ + ++ + G+ + Sbjct: 182 AIRLYIEFYKRLAIPVLPSKRPSWDKFPGADYTIAVDSLMP-DGKTLQVGTAHHLGDNFA 240 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENYLNADGSVTIPTV 412 + + +Y D + + + + H + V RC+ +L + + G V P V Sbjct: 241 KTFDIKYEDVDGEQV-YAHQ---TCYGVSERCIATLLSTHGDDKGLVLPPEV 288 >gi|254282289|ref|ZP_04957257.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B] gi|219678492|gb|EED34841.1| threonyl-tRNA synthetase [gamma proteobacterium NOR51-B] Length = 643 Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 49/158 (31%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A V + + + +GY E+ P LV +G KFAD MF Sbjct: 258 EAPGMVFWHPAGWVIYQTIERYMREQQLAYGYEEIKTPQLVDYSLWQRSGHADKFADGMF 317 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 ++ +++ + + LPLR R+E + G++R Sbjct: 318 MLKSDERDFAVKPMNCPCHIQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH---GIMR 374 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E+ E + ++ Sbjct: 375 VRGFVQDDAHIFCTEDQIQGEVGDFIDMLHDVYADFGF 412 >gi|291566329|dbj|BAI88601.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 622 Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 52/171 (30%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + +G + + + + H GY + P + Sbjct: 230 QELDLFSIQEDAGGGLVFWHPKGSRMRLLIEDYWRQAHLQG-GYELLYTPHIANLALWKT 288 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSE 264 +G + ++MF + + + + + LP+R+ L +R E Sbjct: 289 SGHYDFYRENMFDQIEIENQSYQLKPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYE 348 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E +L+ E+IL Sbjct: 349 RSGVLH---GLMRVRGFTQDDAHIFCLPEQVADEILGVLNLTEKILSDFGF 396 >gi|312875562|ref|ZP_07735563.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|311088816|gb|EFQ47259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] Length = 643 Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 113/336 (33%), Gaps = 21/336 (6%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE-Q 83 ++ + L+++ + ++K E I S + + + ++ LK E + + Sbjct: 113 IKASELPDLEKEMQKIVKNGEKI--EYKIVSKSELLDLFKDDPYKLELLKEEADEVAVYK 170 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 L + + + ++ +L R G + + Sbjct: 171 LEDFVDFGFNALLMNTGKLKHFKLLSVAGAYWQGKSSNPMLQRIFGTAFFKDADLKADLQ 230 Query: 144 IGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 E + D + GA A + R + +++ID ++ GY Sbjct: 231 RREDIKERDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVAD-GYQH 289 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKS 249 V P+L+ +A +G + +DMF D L P + S +Y+H I + Sbjct: 290 VYTPVLMNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRE 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R L R E A G+ R + + + + +E ++L E+ Sbjct: 350 LPIRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEV 406 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + D+ L D + + E+W Q Sbjct: 407 YRDFDITDYYFRLSYRDPKNTDKYFANDEMWERSQK 442 >gi|198284332|ref|YP_002220653.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666034|ref|YP_002426993.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|259516307|sp|B7J7T0|SYT_ACIF2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516338|sp|B5EN57|SYT_ACIF5 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|198248853|gb|ACH84446.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518247|gb|ACK78833.1| threonyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 644 Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 8/160 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +G + + R + F + H E GY + P + ++ Y +G +++ M Sbjct: 259 AGGGLVFWHPMGSRVRRVIEDFWKEAHV-EAGYDLLYTPHIAHEQLWYTSGHKDFYSESM 317 Query: 220 FCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 F + + ++ + LP+R+ L +R E A G+ Sbjct: 318 FDPMQDEGQAYQLKPMNCPFHILIYKDKLHSYRDLPIRWAELGTVYRHEMSGALH---GL 374 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + R + E +L +IL Sbjct: 375 MRVRGFTQDDAHVFCRPDQIEAEIGAVLVLVRKILGTFGF 414 >gi|148653933|ref|YP_001281026.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1] gi|172048584|sp|A5WHD5|SYT_PSYWF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|148573017|gb|ABQ95076.1| threonyl-tRNA synthetase [Psychrobacter sp. PRwf-1] Length = 644 Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 54/171 (31%), Gaps = 6/171 (3%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 + V + + + ++GY E+ P +V +G +A Sbjct: 254 HMQEQSPGMVFWHPNGWTIYQVLEQYMRKVQKDNGYQEIKTPQIVDRSLWEKSGHWGNYA 313 Query: 217 DDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 +MF T+ + + +++ + + LP+R R+E + Sbjct: 314 TNMFTTSSESRDYAVKPMNCPCHVQVFNQGLKSYRELPIRLAEFGSCHRNEPSGSLH--- 370 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + + E + ++ K + L T Sbjct: 371 GLMRVRGFTQDDAHIFCTQAQIQEEVANFIKLTLDVYKDFGFDQIEMKLST 421 >gi|284054770|ref|ZP_06384980.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca] Length = 525 Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 52/171 (30%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + +G + + + + H GY + P + Sbjct: 230 QELDLFSIQEDAGGGLVFWHPKGSRMRLLIEDYWRQAHLQG-GYELLYTPHIANLALWKT 288 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSE 264 +G + ++MF + + + + + LP+R+ L +R E Sbjct: 289 SGHYDFYRENMFDQIEIENQSYQLKPMNCPFHVLTYQSHLHSYRELPIRWAELGTVYRYE 348 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E +L+ E+IL Sbjct: 349 RSGVLH---GLMRVRGFTQDDAHIFCLPEQVADEILGVLNLTEKILSDFGF 396 >gi|251772034|gb|EES52606.1| threonyl-tRNA synthetase [Leptospirillum ferrodiazotrophum] Length = 587 Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 63/176 (35%), Gaps = 8/176 (4%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F R +GA + A + R + + H HGY V P + R + +G Sbjct: 199 FFRTLDENGAGMVLWLPRGARIRRVIEEIWKTRH-DRHGYQYVYTPHIARLDLWKQSGHW 257 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSEAGSA 268 + + MF + + + + + LP+R L +R E Sbjct: 258 DFYRESMFSPMEIEGSEFELKPMNCPFHILIFKEAVKSYRDLPVRLAELGTVYRYERSG- 316 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G+LR F + + R ED +E ++L+ +E+L R V L T Sbjct: 317 --TLHGLLRVRGFTQDDAHIFCRPEDIASEIGKVLTLVDEMLLPFGFTNRSVYLST 370 >gi|184156306|ref|YP_001844646.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956] gi|183227650|dbj|BAG28166.1| threonyl-tRNA synthase [Lactobacillus fermentum IFO 3956] Length = 634 Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 107/350 (30%), Gaps = 43/350 (12%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + + ++ + L+ + L E+++ S EG+ + LK Sbjct: 99 NQQVSADELEGLERAVKKL--AKENLKIELVKVSVDDAVKAVEGDQFSSELLKE------ 150 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI------ 135 E + + I + L + ++ S Sbjct: 151 ----NAEDGQVSLYKMGDATILAQAPIMLYANLVKNVKLLSVAGAYWKGMSSNPMLQRIY 206 Query: 136 ---HLSREHFEIGEALGLMDFDRATKLSGA-------------RFSVLTGHLAHLERALG 179 +E E +R ++ G + + R + Sbjct: 207 GTVFFKKEDLEADLKARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIE 266 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----RWLIPTSEV 234 +++ID + GY V P+L+ +A +G + +DMF D L P + Sbjct: 267 RYVIDKEVGD-GYEHVYTPVLMNLDAYKTSGHWDHYREDMFPPMDMGDGELLELRPMNCP 325 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 S +Y H I + LPLR L R E A G+ R + + + + Sbjct: 326 SHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVALDQ 382 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E ++L ++ K +++ L D + + E+W Q Sbjct: 383 IQDEFAKILKLIMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQ 432 >gi|124507052|ref|XP_001352123.1| prolyl-t-RNA synthase, putative [Plasmodium falciparum 3D7] gi|23505153|emb|CAD51934.1| prolyl-t-RNA synthase, putative [Plasmodium falciparum 3D7] Length = 579 Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 14/192 (7%) Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 S +SL N +E I K LPL FR+E R + + + +F + Sbjct: 183 TCEESSLSLINQIYNENITIKCLPLLIHQYNYKFRNEK----RFEKSLFKSKEFLMKDGY 238 Query: 288 SITREEDS-FTEHERMLSCAEEILKRLDLHYRVVSLCTGD-LGFSACKTYDLEVWLAGQN 345 S E +E+ C + I + L L + ++ D + + + L+ Sbjct: 239 SFHSNEKCLNETYEKYKECYKNIFEELKLSFNIIKKRKKDKMNALESHEFQV---LSRDG 295 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNAD 404 Y+E + G++ S +++ +Y D ++ L GS G+ + R L ++EN+ + + Sbjct: 296 KYKEAAHIFKLGDYYSNKLDIKYLDKKNEKKNI---LMGSYGIGIYRLLYFLIENFYDEE 352 Query: 405 GSVTIPTVLRPY 416 G + +P + P+ Sbjct: 353 G-IKLPQQVAPF 363 >gi|260662523|ref|ZP_05863418.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] gi|260553214|gb|EEX26157.1| threonyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] Length = 627 Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 107/350 (30%), Gaps = 43/350 (12%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + + ++ + L+ + L E+++ S EG+ + LK Sbjct: 92 NQQVSADELEGLERAVKKL--AKENLKIELVKVSVDDAVKAVEGDQFSSELLKE------ 143 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI------ 135 E + + I + L + ++ S Sbjct: 144 ----NAEDGQVSLYKMGDATILAQAPIMLYANLVKNVKLLSVAGAYWKGMSSNPMLQRIY 199 Query: 136 ---HLSREHFEIGEALGLMDFDRATKLSGA-------------RFSVLTGHLAHLERALG 179 +E E +R ++ G + + R + Sbjct: 200 GTVFFKKEDLEADLKARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIE 259 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----RWLIPTSEV 234 +++ID + GY V P+L+ +A +G + +DMF D L P + Sbjct: 260 RYVIDKEVGD-GYEHVYTPVLMNLDAYKTSGHWDHYREDMFPPMDMGDGELLELRPMNCP 318 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 S +Y H I + LPLR L R E A G+ R + + + + Sbjct: 319 SHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVALDQ 375 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E ++L ++ K +++ L D + + E+W Q Sbjct: 376 IQDEFAKILKLIMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQ 425 >gi|227432351|ref|ZP_03914343.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351872|gb|EEJ42106.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 652 Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 9/200 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D ++ G+ V + A + R + +++ D +GY V P+L +G Sbjct: 255 DLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKEL-SNGYQHVYTPVLSNLNLYKTSGH 313 Query: 212 IPKFADDMFCTTDG-----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 + +DMF D L P + S +++H+ + LP+R L R E Sbjct: 314 WDHYREDMFPPMDMGDGEFLELRPMNCPSHIMVFNHKPRSYRELPMRIAELGMMHRYEKS 373 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 A G+ R + + + E E + +L+ + + ++ L D Sbjct: 374 GALT---GLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMGVYRDFNIKNYRFRLSYRD 430 Query: 327 LGFSACKTYDLEVWLAGQNL 346 + D E+W Q Sbjct: 431 PKNTEKYFDDDEMWEKSQKQ 450 >gi|189499158|ref|YP_001958628.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] gi|238692225|sp|B3EKG9|SYT_CHLPB RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|189494599|gb|ACE03147.1| threonyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] Length = 659 Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 58/189 (30%), Gaps = 22/189 (11%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV----SLTNLYSH-- 242 + GY V P + + +G P ++D F + + E + + H Sbjct: 300 KRGYVPVYTPHIGNIDLYKRSGHYPYYSDSQFPPLTYKDDLGREEQYLLKPMNCPHHHLI 359 Query: 243 ---EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ + LP+R +R E + G++R F + + R + E Sbjct: 360 YSSQLRSYRDLPIRMAEFGTVYRHEQSG---ELNGLIRARGFTQDDSHIYCRPDQLVDEI 416 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + + + L V L D EVW + RE Sbjct: 417 CAAIDLTKFVFTTLGFDDIEVRLSLHDPENQGKYGGTEEVWKQAEKDVREA--------- 467 Query: 360 QSRRMNSRY 368 + RM Y Sbjct: 468 -ADRMEINY 475 >gi|189424928|ref|YP_001952105.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ] gi|189421187|gb|ACD95585.1| threonyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 646 Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 7/172 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D GA F++ A L L F H + Y V P +++ E +G Sbjct: 262 DLFSFNDEVGAGFAIWHPKGAMLRTLLEDFERKEHL-KRDYDIVVGPQILKTELWQRSGH 320 Query: 212 IPKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 + ++M+ T ++ +Y ++ + LP R+ L R E Sbjct: 321 YDNYRENMYFTEVDEQSFGVKPMNCLSHMMIYKSQLRSYRDLPQRYFELGTVHRHERAGV 380 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 G+LR F + + + E E + +L +++ Y + Sbjct: 381 LH---GLLRVRCFTQDDAHILCTPEQLDAEIKGVLKFVSDVMGIFGFEYEME 429 >gi|114799933|ref|YP_761871.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] gi|123027650|sp|Q0BXC2|SYT_HYPNA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|114740107|gb|ABI78232.1| threonyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] Length = 657 Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 66/411 (16%), Positives = 112/411 (27%), Gaps = 81/411 (19%) Query: 65 GNLSLVDALKNETSTLKEQL-----PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 G + K+ K Q+ P E+ L ++P Sbjct: 140 GKDEAIATFKSLGEEYKAQIIDDIIPPGEQITVYRQGKWFDLCRGPHLPSTGKLPKAFKL 199 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMD-------------------FDRATKLS 160 + G + + L D D Sbjct: 200 MKLAGAYWRGDHRNEMLQRMYGTAWANEKDLKDHLTRLEEAEKRDHRKLGAQLDLFHFQP 259 Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 A+ SV + + I GY EV P L+ +G KF ++MF Sbjct: 260 EAQGSVFWHPKGFMIWRELEAYIRRQQDADGYVEVKTPQLLNSVFWEKSGHWSKFRENMF 319 Query: 221 CTTDG-----------------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 D L P + + ++ + + LP+R R+ Sbjct: 320 VVPDEIPSTESDAPILSGEGELMALKPMNCPAHVQIFKNAQRSYRDLPIRMAEFGCCHRN 379 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 EA A G++R Q + + RE+ E R L E + L L Sbjct: 380 EAHGALH---GLMRVRQMTQDDAHIFCREDQIADETLRFLKLFETVYGDFGLSEISYKLA 436 Query: 324 T-GDLGFSACKTYD---------------LEVWLAGQNLY----RE------ISSCSTCG 357 T ++ +T+D G+ + E I CG Sbjct: 437 TRPEMRAGTDETWDRAEKALADALTAAGMTFSIAEGEGAFYGPKLEFHLTDAIGRTWQCG 496 Query: 358 NFQ-----SRRMNSRYRDPNSKSLKFT--H-TLNGSGVAVGRCLIAILENY 400 FQ R+++ Y + + H + G+ R + ++ENY Sbjct: 497 TFQLDYVLPERLDAEYTGSDGAKHRPVMLHRAVFGT---FERFMGILIENY 544 >gi|187250976|ref|YP_001875458.1| threonyl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|186971136|gb|ACC98121.1| Threonyl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 583 Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 70/199 (35%), Gaps = 8/199 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D ++ G ++ L + + ++ D + +HGY V +P + R +G Sbjct: 188 DLFSISEDIGPGLILMHPKGGMLRKVVEDWIRDENI-KHGYDLVYSPHIARLHLWQKSGH 246 Query: 212 IPKFADDMFC---TTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 ++++MF D ++ + +Y + + LP+R L +R E Sbjct: 247 ANFYSENMFQPIEVDDQQYQLKPMNCPFHIAIYESHLRSYRDLPVRLAELGTVYRYERSG 306 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 G+LR F + + E E E + A ++K V L T D Sbjct: 307 ---VVHGLLRVRGFTQDDAHIFCTPEQMNGEIEDCFNFAMLVMKTFGFEKFSVELSTWDE 363 Query: 328 GFSACKTYDLEVWLAGQNL 346 T + W QN Sbjct: 364 TKPENYTGGKKDWEEAQNA 382 >gi|297623866|ref|YP_003705300.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093] gi|297165046|gb|ADI14757.1| threonyl-tRNA synthetase [Truepera radiovictrix DSM 17093] Length = 665 Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 7/131 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----EI 244 GY +V P + +++ +G +P +A+ MF + + + + Sbjct: 296 RAGYQQVRTPHVTKEQLFTRSGHLPYYAESMFPPMELDNVRYYLKPMNCPFHHKIFAARP 355 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LPLR +R E A G++R + E E +++ Sbjct: 356 RSYRELPLRLAEYGTCYRYEDHGAL---MGLMRVRSMQMNDAHIYCTPEQFEDEFMGVIA 412 Query: 305 CAEEILKRLDL 315 E + + Sbjct: 413 LYLEYFRLFGI 423 >gi|313680219|ref|YP_004057958.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus profundus DSM 14977] gi|313152934|gb|ADR36785.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Oceanithermus profundus DSM 14977] Length = 649 Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 86/320 (26%), Gaps = 26/320 (8%) Query: 50 RRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 RR + A G L + E++ E+E + S P Sbjct: 141 RRYVLEREEALARYRGKDPYKTELIEDLPE-GEEISFYEQEGFTDLCRGPHVPSTGKIPP 199 Query: 110 L------EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK----- 158 + +L R G + E D R + Sbjct: 200 HFKLTHVAGAYWRGDESRPMLQRIYGVAFRTKEELEHYLWQLEEAKKRDHRRLGRQLELF 259 Query: 159 ----LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 + G + L L FM D + GY V+ P + E +G P Sbjct: 260 HIDPMVGKGLVLWLPKGNVLREELVAFMRDEQI-KRGYQLVTTPHIGSLELYKTSGHYPY 318 Query: 215 FADDMFCTTDGRWLIPTSEVSLTNLYS-----HEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +A+ F + + + + LPLR +R E Sbjct: 319 YAESQFPPMELEDGEAYLLKPMNCPHHVRIYAMRPRSYRELPLRLAEFGTVYRFEQSG-- 376 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 + G+ R F + + E E +L ++ + L L + D G Sbjct: 377 -ELHGLTRVRGFTQDDAHIFCTPEQVKEEFLGVLDLTLKVFRTLGLSDFRARIGVRDPG- 434 Query: 330 SACKTYDLEVWLAGQNLYRE 349 S D E W + +E Sbjct: 435 SDKYVGDAEHWAVAERQIQE 454 >gi|282877699|ref|ZP_06286514.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310] gi|281300271|gb|EFA92625.1| threonine--tRNA ligase [Prevotella buccalis ATCC 35310] Length = 654 Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 59/228 (25%), Gaps = 17/228 (7%) Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFS---VLTGHLAHLERAL-----GQFMIDLHT 187 + E+ + E D + K V G L + Q M+ Sbjct: 228 KMLDEYLLMLEEAKKRDHRKIGKEMELFMFSDRVGKGMPIWLPKGTELRLRLQEMLRKIQ 287 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHE--- 243 GY EV P + +G + D + + E Sbjct: 288 KRFGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEDDEEYMLKPMNCPHHCEVFA 347 Query: 244 --IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 K LPLR +R E + G+ R F + + R + E R Sbjct: 348 CKPRSYKDLPLRIAEFGTVYRYEKSG---ELHGLTRVRSFTQDDAHIFCRPDQVKNEFLR 404 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 ++ + + + + D EVW + E Sbjct: 405 VMDIIQAVFTIFNFDNFEAQISLRDPNDKEKYIGSDEVWAESEQAIIE 452 >gi|304319895|ref|YP_003853538.1| Threonyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] gi|303298798|gb|ADM08397.1| Threonyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] Length = 657 Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 91/326 (27%), Gaps = 37/326 (11%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R +E +++ K + + + R+ S + + E A Sbjct: 108 RKTPFSTEDFDAIERKM-AALVDAD-LETRKEVVSREEAARLFEAQGEHYKAEIVRDLPT 165 Query: 81 KEQLPILEKEEHE------VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E++ I + S K + + L +L R G + Sbjct: 166 DEEVKIYHHGDWYDLCRGPHLPSTKHIGKAFKLLKLAGAYWRGDHRNEVLHRIYGTAWAN 225 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALGQFMIDLHT 187 + + E D R K A SV + + I Sbjct: 226 EKALKAYLTRLEEAEKRDHRRLGKQMDLFHLQEEAHGSVFWHPKGYTMWLALEAYIRRRL 285 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT---------- 237 GY EV P L+ + +G K++ +MF D E + Sbjct: 286 DAAGYKEVKTPQLIDAKLWQSSGHWGKYSQNMFVVPDEV-PDVEGEGPVIDPEAKLMAVK 344 Query: 238 --------NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 ++ I + LP+R R+E A G++R QF + + Sbjct: 345 PMNCPAHVQIFRQGITSYRDLPIRMAEFGCCHRNEPHGALH---GIMRVRQFTQDDAHIF 401 Query: 290 TREEDSFTEHERMLSCAEEILKRLDL 315 EE E R A + + L Sbjct: 402 CTEEQIVEETIRFCELASSVYRDLGF 427 >gi|332968643|gb|EGK07696.1| threonine--tRNA ligase [Psychrobacter sp. 1501(2011)] Length = 644 Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 51/162 (31%), Gaps = 6/162 (3%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 + V + + + ++GY E+ P +V +G +A Sbjct: 254 HMQEQSPGMVFWHPNGWTIYQVLEQYMRKVQKDNGYQEIKTPQIVDRSLWEKSGHWGNYA 313 Query: 217 DDMFCTTDGR--WLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 +MF T+ + + +++ + + LP+R R+E + Sbjct: 314 TNMFTTSSESRDYAVKPMNCPCHVQVFNQGLKSYRELPIRLAEFGSCHRNEPSGSLH--- 370 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + + E + ++ K Sbjct: 371 GLMRVRGFTQDDAHIFCTQAQIQEEVANFIKLTLDVYKDFGF 412 >gi|319957838|ref|YP_004169101.1| ser-tRNA(thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] gi|319420242|gb|ADV47352.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] Length = 605 Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 12/184 (6%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +GA A L L Q + H GY V P +++ + +G + ++M Sbjct: 228 AGAGLPFWLPKGARLRSKLEQILWRSH-RRRGYEPVRGPEILKADMWRTSGHYACYGENM 286 Query: 220 FCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + T L P + + ++ + + LPL++ R E G+L Sbjct: 287 YLTEIDGQEYGLKPMNCIGHILIFKNSTKSYRDLPLKYFEYGVVHRHEKSGVLH---GLL 343 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R +F + + E ++ + ++K+ Y + D Sbjct: 344 RVREFTQDDAHIFCTPEQIKPVVLEVVEFVDAVMKKFGFEYTMEISTK-----PEKAIGD 398 Query: 337 LEVW 340 EVW Sbjct: 399 DEVW 402 >gi|296816643|ref|XP_002848658.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238839111|gb|EEQ28773.1| prolyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 589 Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 9/140 (6%) Query: 219 MFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + L PT E +T + S + + LPLR ++ +R E R G+LR Sbjct: 95 LDRKKTPLLLAPTHEEEITTVISSLVKSYRDLPLRVYQISRKYRDEP----RPRHGLLRG 150 Query: 279 HQFWKCELVSITREE-DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 +F +L + E ++ + + E+ + L L + V S +G++G + Sbjct: 151 REFVMKDLYTFDSTEAEAINTYNTVKDAYMELFEELKLPFVVASAASGNMGGN----LSH 206 Query: 338 EVWLAGQNLYREISSCSTCG 357 E I SCS C Sbjct: 207 EFHFPSSKGEDTIVSCSQCE 226 >gi|116617774|ref|YP_818145.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272025|sp|Q03YF0|SYT_LEUMM RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116096621|gb|ABJ61772.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 652 Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 9/200 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D ++ G+ V + A + R + +++ D +GY V P+L +G Sbjct: 255 DLFFTSQEVGSGLPVWLPNGATIRRQVERYITDKEL-SNGYQHVYTPVLSNLNLYKTSGH 313 Query: 212 IPKFADDMFCTTDG-----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 + +DMF D L P + S +++H+ + LP+R L R E Sbjct: 314 WDHYREDMFPPMDMGDGEFLELRPMNCPSHIMVFNHKPRSYRELPMRIAELGMMHRYEKS 373 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 A G+ R + + + E E + +L+ + + ++ L D Sbjct: 374 GALT---GLSRVREMTLNDGHTFVEPEKLEEEFKSILTMMMGVYRDFNIKDYRFRLSYRD 430 Query: 327 LGFSACKTYDLEVWLAGQNL 346 + D E+W Q Sbjct: 431 PKNTEKYFDDDEMWEKSQKQ 450 >gi|15644384|ref|NP_229436.1| hypothetical protein TM1636 [Thermotoga maritima MSB8] gi|18203590|sp|Q9X1X1|RAD50_THEMA RecName: Full=Probable DNA double-strand break repair rad50 ATPase gi|4982209|gb|AAD36703.1|AE001806_13 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 852 Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 11/98 (11%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +++ IR E ++ L + E LDEK + L K I R+S S +I A Sbjct: 497 NLKSIRNQIEKIEEELHRLGYSEDLEE--KLDEKRKKLRK----IEEERHSISQKITAA- 549 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++N+ +K ++ + E + + Sbjct: 550 ----DVQISQIENQLKEIKGEIEAKRETLKEQREEMDQ 583 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNETSTL 80 +E + LD+K L + ++ R+ S S+ I E + +++N+ + Sbjct: 449 VEFNIDEFEKLDQKRSELENTLNVLKERKKSLSSLIEDLLMKIEEGKKNLKSIRNQIEKI 508 Query: 81 KEQLP 85 +E+L Sbjct: 509 EEELH 513 >gi|227514102|ref|ZP_03944151.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227087473|gb|EEI22785.1| threonine--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 634 Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 107/350 (30%), Gaps = 43/350 (12%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + + ++ + L+ + L E+++ S EG+ + LK Sbjct: 99 NQQVSADELEGLERAVKKL--AKENLKIELVKVSVDDAVKAVEGDQFSSELLKE------ 150 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI------ 135 E + + I + L + ++ S Sbjct: 151 ----NAEDGQVSLYKMGDTTILAQAPIMLYANLVKNVKLLSVAGAYWKGMSSNPMLQRIY 206 Query: 136 ---HLSREHFEIGEALGLMDFDRATKLSGA-------------RFSVLTGHLAHLERALG 179 +E E +R ++ G + + R + Sbjct: 207 GTVFFKKEDLEADLKARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIE 266 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----RWLIPTSEV 234 +++ID + GY V P+L+ +A +G + +DMF D L P + Sbjct: 267 RYVIDKEVGD-GYEHVYTPVLMNLDAYKTSGHWDHYREDMFPPMDMGDGELLELRPMNCP 325 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 S +Y H I + LPLR L R E A G+ R + + + + Sbjct: 326 SHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVALDQ 382 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E ++L ++ K +++ L D + + E+W Q Sbjct: 383 IQDEFAKILKLIMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQ 432 >gi|257456688|ref|ZP_05621878.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580] gi|257445881|gb|EEV20934.1| threonyl-tRNA synthetase [Treponema vincentii ATCC 35580] Length = 586 Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 6/194 (3%) Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 + + + + E + + D V Q + Sbjct: 165 WETPNDLKTYLTMQAEAEKHDHRKIGRELDLFHIEEDNPGEVFWHPNGWTLYLTVQQHVR 224 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL---TNLYS 241 E GY EV+ P ++ +G K+ ++MF T + + ++ ++ Sbjct: 225 QKIKEDGYVEVNTPFVMPQSLWLRSGHWEKYKENMFITESEKRMFALKPMNCPGHVEIFK 284 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 I + LPLR R+E + G++R F + + EE +E + Sbjct: 285 QGIKSYRDLPLRIAEFGSCTRNEPSGSLH---GIMRVRGFVQDDAHIFCTEEQISSEVCK 341 Query: 302 MLSCAEEILKRLDL 315 + + + + Sbjct: 342 FCNLLKSLYRDFGF 355 >gi|161760548|ref|NP_907033.2| threonyl-tRNA synthetase [Wolinella succinogenes DSM 1740] Length = 602 Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 10/185 (5%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 R+H ++G +GL FD GA + A L R L + + H + Y V P Sbjct: 207 RDHRKVGTEMGLFIFDED---VGAGLPIWLPAGARLRRRLEAMLTEAHIRRN-YEPVRGP 262 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +++ + +G + ++M+ T + P + V +Y + + LPLRF Sbjct: 263 EILKSDLWKISGHYQNYKENMYFTKIDEVEYGIKPMNCVGHIKVYGSGVRSYRELPLRFY 322 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R E G+LR +F + + R E E ++ ++I+ Sbjct: 323 EYGVVHRHEKSGVLH---GLLRVREFTQDDAHIFCRPEQIKDEVVDIVHFVDKIMSAFGF 379 Query: 316 HYRVV 320 +Y + Sbjct: 380 NYEME 384 >gi|229496081|ref|ZP_04389803.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] gi|229316977|gb|EEN82888.1| threonyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] Length = 672 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 48/167 (28%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHE---- 243 + GY +V P + E +G K+ AD T + + + E Sbjct: 309 DFGYQQVMTPHIGNIELYKTSGHYAKYGADSFRPITTPQEGEEFMLKPMNCPHHCEIYRI 368 Query: 244 -IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + LP+R +R E + G+ R F + + E E ++ Sbjct: 369 KPHSYRDLPVRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCTPEQVKDEFLKV 425 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + I K L + D E W + E Sbjct: 426 MDIIFIIFKALKFENFEAQISLRDKNNREKYIGSDENWDRAEQAIIE 472 >gi|119476522|ref|ZP_01616873.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] gi|119450386|gb|EAW31621.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] Length = 645 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 48/165 (29%), Gaps = 6/165 (3%) Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIP 213 D A V + + + + Y E+ P LV +G Sbjct: 251 DLFHMQEEAPGMVFWHPKGWSIYTTIESYMREQQTLNNYQEIKTPQLVDFSLWQKSGHAD 310 Query: 214 KFADDMFC--TTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 KF DDMF + I +++ + + LPLR R+E + Sbjct: 311 KFGDDMFTLEADGRDFAIKPMNCPCHVQIFNQGLKSYRDLPLRLAEFGSCHRNEPSGSLH 370 Query: 271 DTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E + + + Sbjct: 371 ---GIMRVRGFVQDDAHIFATENQIQPEVSVFIDFLHSVYEDFGF 412 >gi|119358269|ref|YP_912913.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] gi|119355618|gb|ABL66489.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] Length = 675 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 54/189 (28%), Gaps = 22/189 (11%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV----SLTNLYSH-- 242 + GY V P + E +G P ++D F E + + H Sbjct: 313 KRGYLPVYTPHIGNIELYKRSGHYPYYSDSQFPPLTYHDENGKQEQYLLKPMNCPHHHLI 372 Query: 243 ---EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 ++ + LP+R +R E + G++R F + + R + E Sbjct: 373 YNVKLRSYRDLPIRLAEFGTVYRHEQSG---ELNGLVRARGFTQDDSHIYCRPDQLVDEI 429 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + + + L L D EVW + E Sbjct: 430 CNAIDLTQHVFATLGFSDVQTRLSMHDPLNQEKYGGTPEVWEQAEKDVTEA--------- 480 Query: 360 QSRRMNSRY 368 + RM Y Sbjct: 481 -ANRMGINY 488 >gi|222056447|ref|YP_002538809.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32] gi|221565736|gb|ACM21708.1| threonyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 645 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 61/174 (35%), Gaps = 6/174 (3%) Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG 225 V+ + R + + + Y V P +++ + +G + ++M+ T Sbjct: 274 VIWHPKGAMLRTIIEDFERREHLKRDYDIVVGPQILKTDLWQRSGHYDNYRENMYFTEVD 333 Query: 226 RWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 ++ +Y + + LPLR L R E G+LR F Sbjct: 334 EQSFGIKPMNCLSHMMIYKSRLRSYRDLPLRLFELGTVHRHERAGVLH---GLLRVRCFT 390 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 + + + E +E + ++S ++++ + + + + + +D Sbjct: 391 QDDAHILCTPEQLDSEIKGVISFVQDVMGVFGFEFEMELSTRPEKSIGSDEDWD 444 >gi|206603264|gb|EDZ39744.1| Threonyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG'] Length = 617 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 7/140 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY----SHEI 244 HGY V P + R + +G + D MF + + + + Sbjct: 259 RHGYRYVYTPHIARLDLWMQSGHWDYYQDSMFRPMETEGTAYELKPMNCPFHILIFRESV 318 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LP+R + L +R E G++R F + + + ED E +L+ Sbjct: 319 QSYRDLPIRLSELGTVYRYERSG---TLHGLMRVRGFTQDDAHIFCKPEDLAGEIRNVLA 375 Query: 305 CAEEILKRLDLHYRVVSLCT 324 ++++ R R V L T Sbjct: 376 LVDQMIGRFGFTDRTVYLST 395 >gi|170289089|ref|YP_001739327.1| SMC domain-containing protein [Thermotoga sp. RQ2] gi|170176592|gb|ACB09644.1| SMC domain protein [Thermotoga sp. RQ2] Length = 852 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 11/98 (11%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +++ IR E ++ L + E LDEK + L K I R+S S +I A Sbjct: 497 NLKSIRNQIEKIEEELHRLGYSEDLEE--KLDEKRKKLRK----IEEERHSISQKITAA- 549 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++N+ +K ++ + E + + Sbjct: 550 ----DVQISQIENQLKEIKGEIEAKRETLKEQREEMDQ 583 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNETSTL 80 +E + LD+K L + ++ R+ S S+ I E + +++N+ + Sbjct: 449 VEFNVDEFEKLDQKRSELENTLNVLKERKKSLSSLIEDLLMKTEEGKKNLKSIRNQIEKI 508 Query: 81 KEQLP 85 +E+L Sbjct: 509 EEELH 513 >gi|148270285|ref|YP_001244745.1| SMC domain-containing protein [Thermotoga petrophila RKU-1] gi|281412591|ref|YP_003346670.1| SMC domain protein [Thermotoga naphthophila RKU-10] gi|147735829|gb|ABQ47169.1| SMC domain protein [Thermotoga petrophila RKU-1] gi|281373694|gb|ADA67256.1| SMC domain protein [Thermotoga naphthophila RKU-10] Length = 852 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 11/98 (11%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +++ IR E ++ L + E LDEK + L K I R+S S +I A Sbjct: 497 NLKSIRNQIEKIEEELHRLGYSEDLEE--KLDEKRKKLRK----IEEERHSISQKITAA- 549 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++N+ +K ++ + E + + Sbjct: 550 ----DVQISQIENQLKEIKGEIEAKRETLKEQREEMDQ 583 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNETSTL 80 +E + + LD+K L + ++ R+ S S+ I E + +++N+ + Sbjct: 449 VEFNVDELEKLDQKRSELENTLNVLKERKKSLSSLIEDLLMKTEEGKKNLKSIRNQIEKI 508 Query: 81 KEQLP 85 +E+L Sbjct: 509 EEELH 513 >gi|189501972|ref|YP_001957689.1| threonyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2] gi|189497413|gb|ACE05960.1| hypothetical protein Aasi_0559 [Candidatus Amoebophilus asiaticus 5a2] Length = 644 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 9/169 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------CTTDGRWLIPTSEVSLTNLYSH 242 + GY V P + E +G K+ +D F + +L P + +Y H Sbjct: 291 KAGYQPVVTPHIGHKELYMTSGHYDKYGEDSFQPIRTPHEGEEFFLKPMNCPHHCEIYKH 350 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 E + LP+R +R E + G++R F + + R + E ++ Sbjct: 351 EPRSYRDLPVRLAEFGTVYRYEQHG---ELHGLVRTRGFTQDDAHIFCRNDQVREEFAKV 407 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 + + L L D D E W + E++ Sbjct: 408 IDLVTYVFSALGFSDYTARLSFRDPEQLHKYIGDQEDWDKAEEAIEEVA 456 >gi|149185120|ref|ZP_01863437.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21] gi|148831231|gb|EDL49665.1| threonyl-tRNA synthetase [Erythrobacter sp. SD-21] Length = 671 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 93/333 (27%), Gaps = 44/333 (13%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 + + +++E+ R +IK + +R S I + AEG + + K E Sbjct: 117 EPFSMDDLPAIEEEMRRIIKADKPLRREVWSRQQLIDKWEAEGEVFKAEWAKELPED--E 174 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL----------------IR 126 +L + + + + Sbjct: 175 ELTVY-WSGEDWLDMCRGPHLASTGKLDPQAFKLMRVAGAYWRGDQKNAQLTRIYGTGWL 233 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 + + + + E + + D A SV + + + Sbjct: 234 NKKQLNAHLTRLEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPNGYRIWRELEAYMRRK 293 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD---------------------- 224 GY E+ P L+ +G K+A++MF D Sbjct: 294 MDGAGYREIKTPQLMDVRQWTASGHWGKYAENMFAVPDIVPDVDDSGAASAHPKVADDAD 353 Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + P + + ++ I + LP+R + R+E A G++R QF + Sbjct: 354 WMAIKPMNCPAHVLVFKQGITSYRDLPIRLGEMGCCHRNEPHGALH---GLMRVRQFTQD 410 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 + E E AE + K + Sbjct: 411 DAHIFCSESQVVEEVRAFCKLAESVYKDFGFTF 443 >gi|160878906|ref|YP_001557874.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|160427572|gb|ABX41135.1| threonyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 652 Score = 49.8 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 70/216 (32%), Gaps = 12/216 (5%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + M+ + G +L A + + L +++ D GY PLL + Sbjct: 240 DHNKLGREMELFATVDVIGQGLPLLMPKGAKMIQTLQRWIEDEE-ERRGYMRTKTPLLAK 298 Query: 203 DEAMYGTGQIPKFADDMF------CTTDGRWLIPTSEVSLTNL-YSHEIIESKSLPLRFT 255 + + + + MF + + Y + LP R+ Sbjct: 299 KDLYEISDHWNHYKEGMFVLGDEEDENAEVFALRPMTCPFQYYVYKQSQKSYRDLPCRYG 358 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + FR+E + G+ R QF E I E E + + A+ L L L Sbjct: 359 ETSTLFRNEDSG---EMHGLTRVRQFTISEGHLIVTPEQLEEEFKGCVDLAKYCLTTLGL 415 Query: 316 HYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 V + D + E W QN+ R+I Sbjct: 416 ADDVTYRLSKWDPNNQGKYLGNEETWNKVQNMMRDI 451 >gi|320536876|ref|ZP_08036869.1| threonyl-tRNA synthetase [Treponema phagedenis F0421] gi|320146259|gb|EFW37882.1| threonyl-tRNA synthetase [Treponema phagedenis F0421] Length = 583 Score = 49.8 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 51/158 (32%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + L Q + GY EV P ++ +G K+ ++MF Sbjct: 199 ENPGQIFWHPNGWALYLLVQNYVREKIKADGYLEVKTPFVMPQSLWERSGHWAKYRENMF 258 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + L ++ ++ I + LPLR R+E + G+LR Sbjct: 259 ITESEKRLFALKPMNCPGHIEIFKQGIKSYRDLPLRLAEFGSCTRNEPSGSLH---GILR 315 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E ++ + + + Sbjct: 316 VRGFVQDDAHIFCTEAQISSEVKKFCALLKNMYADFGF 353 >gi|187921760|ref|YP_001890792.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|187720198|gb|ACD21421.1| threonyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 404 Score = 49.8 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 57/193 (29%), Gaps = 12/193 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V + + + G+ E+ P L+ +G Sbjct: 13 LDLFHQQEEGVGMVFWHPRGWELYRVLEVYVRARMRRAGFREIRTPQLLARSLWEKSGHW 72 Query: 213 PKFADDMF-----CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 KF M+ L P S +++ + + LP+R++ R E Sbjct: 73 EKFGAAMYSLADAEEGRALCLKPMSCPCHVQVFNQRVRSYRELPVRYSEFGACHRDEPSG 132 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 + G+ R F + + E E R + + L V+L T Sbjct: 133 SL---EGLKRTRAFVQDDAHVFCTEAQIEVEVGRFCALLRTVYADLGFPRFKVALATR-- 187 Query: 328 GFSACKTYDLEVW 340 A + D + W Sbjct: 188 --PAMRAGDDQTW 198 >gi|325295461|ref|YP_004281975.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065909|gb|ADY73916.1| threonyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 658 Score = 49.8 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 92/331 (27%), Gaps = 42/331 (12%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + L+ + +IK E R + + + + + + L + + K Sbjct: 113 SISEEDLSKLEAEMEKIIKAKETFRRE--EITREQALELFKDDPYKTELLDSISENEKIT 170 Query: 84 LPI-LEKEEHEVCSSLKKLISCIPNV---PLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 + E + + + + +L R G Sbjct: 171 IYWLGEDFFDLCKGPHIEHAGMVKAFKLLSVAGAYWRGDSKNKMLQRIYGTAFWKKKELE 230 Query: 140 EHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 E+ E D K V + R + ++ + G Sbjct: 231 EYLHRLEEAKKRDHRVLGKQLDLFSIYEEAGSGLVFWHPNGAIIRREIEEWVEKEHEKRG 290 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCT----TDGRWLIPTSEVSLTN--------- 238 Y + P +++ + +G + ++MF D + +V LT Sbjct: 291 YQRIYTPHIMKADLWKISGHYDFYKENMFFVPVVEHDEEEKLGNEKVPLTCEEVERANWY 350 Query: 239 ------------LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 +Y + K LPLRF R E + G+LR F + + Sbjct: 351 AVKPMNCPGHILIYKSQPRSYKDLPLRFFEFGTVHRYEKSGSLH---GLLRVRGFTQDDG 407 Query: 287 VSITREEDSFTEHERMLSCAEEILKRLDLHY 317 R + E +L E+L L Y Sbjct: 408 HIFCRPDQLKDEILGVLDYVMELLSVFKLDY 438 >gi|295135444|ref|YP_003586120.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87] gi|294983459|gb|ADF53924.1| threonyl-tRNA synthetase [Zunongwangia profunda SM-A87] Length = 648 Score = 49.8 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 9/164 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------CTTDGRWLIPTSEVSLTNLYSH 242 + GY V +P + E +G K+ +D F + L P + +Y+ Sbjct: 287 KAGYEMVVSPHIGHKELYVTSGHYAKYGEDSFQPIKTPHEGEEFLLKPMNCPHHCEMYNS 346 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LP RF +R E + G+ R F + + E E +++ Sbjct: 347 QSWSYRDLPKRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCTPEQLDEEFKKV 403 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + L + D +VW +N Sbjct: 404 IDLTLYVFDSLGFENFTAQVSLRDPENKEKYIGSDDVWEKAENA 447 >gi|257869188|ref|ZP_05648841.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803352|gb|EEV32174.1| threonyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 646 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 96/318 (30%), Gaps = 21/318 (6%) Query: 44 IEDIRARRNSNSAQIG-QAIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 E++ R S + + AE + L+ L + + Q Sbjct: 131 KENLPIERRVLSKKEALELFAEDPYKVELISELPEDETITAYQQGEFVDLCRGPHVPSTG 190 Query: 101 LISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL- 159 I + + ++N ++ R G +E + E D + K Sbjct: 191 RIQVFKLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKELKEFIRLREEAKERDHRKLGKEL 250 Query: 160 --------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 GA A + R + ++++D S GY V P++ + +G Sbjct: 251 DLFMLSPEVGAGLPFWLPKGATIRRTIERYIVDKEVSL-GYQHVYTPIMANVDLYKTSGH 309 Query: 212 IPKFADDMFCTTDGRWLIPTSEVSLTNLYSH-----EIIESKSLPLRFTTLAPSFRSEAG 266 + +DMF D + + +I + LP+R L R E Sbjct: 310 WDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKS 369 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 A G+ R + + + R + E +R L E+ K ++ L D Sbjct: 370 GALS---GLQRVREMTLNDGHTFVRPDQIKDEFKRTLDLMVEVYKDFNVTDYRFRLSYRD 426 Query: 327 LGFSACKTYDLEVWLAGQ 344 D +W Q Sbjct: 427 PENKDKYFDDDAMWENAQ 444 >gi|239618448|ref|YP_002941770.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|259516548|sp|C5CI64|SYT_KOSOT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|239507279|gb|ACR80766.1| threonyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 648 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 14/184 (7%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 G G + E S+HGY EV P ++ D + +G + D+M Sbjct: 264 PGMPIYHPKGTIVLNE---LMKFSREVHSKHGYQEVMTPQIMNDVLWHRSGHWDHYRDNM 320 Query: 220 FCT--TDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + T + ++ I +Y + + LPL+ R E G+L Sbjct: 321 YFTEKDEQQYAIKPMNCPGHILIYKSRAMSYRDLPLKLFEFGKVHRYERSGVLH---GLL 377 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R F + + E + + ++ + I YR D Sbjct: 378 RVRGFIQDDAHIFCTREQLKEQLKDVIRFVDMIYTPFGFEYRADLCTR-----PEDFMGD 432 Query: 337 LEVW 340 +E+W Sbjct: 433 VEIW 436 >gi|169621989|ref|XP_001804404.1| hypothetical protein SNOG_14207 [Phaeosphaeria nodorum SN15] gi|111057324|gb|EAT78444.1| hypothetical protein SNOG_14207 [Phaeosphaeria nodorum SN15] Length = 542 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 19/153 (12%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL-- 236 Q + + G+ EV P++ + +G +A+DMF T + + Sbjct: 106 LQSFLRAQYPQFGFQEVITPIIYKKSLWEKSGHWENYAEDMFSVQGRGATGQTEKAQVGE 165 Query: 237 --------------TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 L+ EI + LP+R+ + R+E + G+ R +F Sbjct: 166 DEEFGLKPMNCPGHCLLFRDEIKSYRDLPIRYADFSALHRNEVSGSLT---GLTRVRRFH 222 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + R + E E+ L + L Sbjct: 223 QDDAHIFCRPDQILPEIEQTLKFVGMVYNTFGL 255 >gi|241761215|ref|ZP_04759303.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374122|gb|EER63619.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 659 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 97/354 (27%), Gaps = 44/354 (12%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++ + R +I + + I ++G + K L E + Sbjct: 120 EDLPLIEAEMRKIIAQNNALVREVWERDKLISLWESQGEKFKAEWAK----ELPEGQELT 175 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL----------------IRSVGKK 131 E + + T + + + Sbjct: 176 IYRAGEWFDMCRGPHLPSTGKLDPKAFKLTRVSGAYWRGDQNNAMLSRIYGTGWLNAKQL 235 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + E + + D A+ SV + + + Sbjct: 236 KVHLERLEEAQKRDHRRLGQEMDLFHLQQEAQGSVFWHPNGYTIWLQLEAYLRRRMKNAN 295 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----------------RWLIPTSEV 234 Y EV P L+ +G KF ++MF D L P + Sbjct: 296 YKEVKTPQLMDAALWEASGHWGKFRENMFVVPDEIPSTDPDKPVLSGKGNLMALKPMNCP 355 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 + ++ I + LPLR R+EA A G++R Q + + E Sbjct: 356 AHIQIFKQGIRSYRELPLRMLEFGCCHRNEAHGALH---GLMRVRQLTQDDAHIFCTAEQ 412 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 TE + ++ + I + L V L + D E+W +N R Sbjct: 413 IVTETKDFVNLLDSIYRDLGFTSYAVKLSLR----PELRAGDDELWDNAENGLR 462 >gi|330935757|ref|XP_003305117.1| hypothetical protein PTT_17864 [Pyrenophora teres f. teres 0-1] gi|311318063|gb|EFQ86830.1| hypothetical protein PTT_17864 [Pyrenophora teres f. teres 0-1] Length = 528 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 19/153 (12%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL-- 236 Q + + G+ EV P++ + +G +A+DMF E Sbjct: 92 LQSFLRAQYPQFGFQEVITPIIYKKSLWEKSGHWENYAEDMFSVQGRGTTAQIPEAEGGE 151 Query: 237 --------------TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 L+ EI + LP+R + R+E A G+ R +F Sbjct: 152 DGEFGLKPMNCPGHCLLFRDEIKSYRDLPVRLADFSALHRNEISGALT---GLTRVRRFH 208 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + R + E E+ L + + L Sbjct: 209 QDDAHIFCRPDQILAEIEQTLKFVAMVYRTFGL 241 >gi|189197599|ref|XP_001935137.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981085|gb|EDU47711.1| threonyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 542 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 19/153 (12%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL-- 236 Q + + G+ EV P++ + +G +A+DMF E Sbjct: 106 LQSFLRAQYPQFGFQEVITPIIYKKSLWEKSGHWENYAEDMFSVQGRGTTAQIPEAEGGE 165 Query: 237 --------------TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 L+ EI + LP+R + R+E A G+ R +F Sbjct: 166 DGEFGLKPMNCPGHCLLFRDEIKSYRDLPVRLADFSALHRNEISGALT---GLTRVRRFH 222 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + R + E E+ L + + L Sbjct: 223 QDDAHIFCRPDQILAEIEQTLKFVAMVYRTFGL 255 >gi|56551661|ref|YP_162500.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|260752754|ref|YP_003225647.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|73919847|sp|Q5NPH1|SYT_ZYMMO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|56543235|gb|AAV89389.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|258552117|gb|ACV75063.1| threonyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 659 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 98/354 (27%), Gaps = 44/354 (12%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++ + R +I + + I ++G + K L E + Sbjct: 120 EDLPLIEAEMRKIIAQNNALVREVWERDKLISLWESQGEKFKAEWAK----ELPEGQELT 175 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL----------------IRSVGKK 131 E + + T + + + Sbjct: 176 IYRAGEWFDMCRGPHLPSTGKLDPKAFKLTRVSGAYWRGDQNNAMLSRIYGTGWLNAKQL 235 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + + E + + D A+ SV + + + Sbjct: 236 KAHLERLEEAQKRDHRRLGQEMDLFHLQQEAQGSVFWHPNGYTIWLQLEAYLRRRMKNAN 295 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----------------RWLIPTSEV 234 Y EV P L+ +G KF ++MF D L P + Sbjct: 296 YKEVKTPQLMDAALWEASGHWGKFRENMFVVPDEIPSTDPDKPVLSGKGNLMALKPMNCP 355 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 + ++ I + LPLR R+EA A G++R Q + + E Sbjct: 356 AHIQIFKQGIRSYRELPLRMLEFGCCHRNEAHGALH---GLMRVRQLTQDDAHIFCTAEQ 412 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 TE + ++ + I + L V L + D E+W +N R Sbjct: 413 IVTETKDFVNLLDSIYRDLGFTSYAVKLSLR----PELRAGDDELWDNAENGLR 462 >gi|15679133|ref|NP_276250.1| seryl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] gi|3122907|sp|O27194|SYS2_METTH RecName: Full=Type-2 seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|2622225|gb|AAB85611.1| seryl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] Length = 513 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 88/264 (33%), Gaps = 57/264 (21%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 K G + L RAL +F I+ G+ E P L+ + M + Sbjct: 204 VKKFPGRGQWFYGPKITALHRALEEFFIERIVKPLGFVECLFPKLIPLDIMNKMRYLEGL 263 Query: 216 ADDMFCT---------------------------------TDGRWLIPTSEVSLTNLYSH 242 + M+ G + P SH Sbjct: 264 PEGMYYCSAPSRDPETFEEFKNELIINREVPMDLLKRGIKDPGYVIAPAQCEPFYQFLSH 323 Query: 243 EIIESKSLPLRFTTLA-PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 E++ ++ LP++F + ++R EAG ++G+ R H+F + ELV + ++ +R Sbjct: 324 EVVSAEDLPVKFFDRSGWTYRWEAGG----SKGLDRVHEFQRVELVWLAEPGETEEIRDR 379 Query: 302 MLSCAEEILKRLDLHYRV-----------VSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + + + L+L + + + F Y++ + L G+ + Sbjct: 380 TVELSHDAADELELEWYTEVGDDPFYLEGRKVEERGIEFPDVPKYEMRLSLPGREKGVAV 439 Query: 351 SSCSTCGNF--------QSRRMNS 366 S + G ++R +N Sbjct: 440 VSANVHGTHFIEGFSIREARNLNI 463 >gi|116872988|ref|YP_849769.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458497|sp|A0AJ08|SYT_LISW6 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|116741866|emb|CAK20990.1| threonyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 640 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 67/345 (19%), Positives = 121/345 (35%), Gaps = 28/345 (8%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDI-RA----RRNSNSAQ--IGQAIAEGNL---SLVDA 72 + +E ++S DE + K+++ I R R S + I + A G+ L++A Sbjct: 103 YDIDTEAVIS-DESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEA 161 Query: 73 L-KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK 131 + K+ET T+ Q + V I + + +N +L R G Sbjct: 162 IPKDETVTIYTQGEFFDL-CRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYGTA 220 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHT 187 + +E ++ + D + K L V G L + A + +I+ + Sbjct: 221 FFDKNGLKEFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYI 280 Query: 188 SEHG----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNL 239 + Y V P++ E +G + +DMF T L P + + Sbjct: 281 VDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMI 340 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y ++I + LP+R L R E A G+ R + R + E Sbjct: 341 YKNDIHSYRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEF 397 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 +R++ E+ K D+ L D + D +W Q Sbjct: 398 KRVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 442 >gi|304382923|ref|ZP_07365405.1| threonine--tRNA ligase [Prevotella marshii DSM 16973] gi|304335948|gb|EFM02196.1| threonine--tRNA ligase [Prevotella marshii DSM 16973] Length = 654 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 93/357 (26%), Gaps = 44/357 (12%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + ++EK R L KK E + R S + K + K Sbjct: 111 GVAISENDFPKIEEKMRELAKKDEPV--VRRDISKA----------DALKEFKEDGQEYK 158 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPL--EEVPIGTSANENILIRSVGKKPSAIHLSR 139 + L+ + + + + + + P I ++ ++R Sbjct: 159 VEHIDLDLADGTISTYTQGAFTDLCRGPHLVSTGAIKAIKITSVAGAFWRGDAKREQMTR 218 Query: 140 EHFEIGEALGLMD-----FDRATKLSGARFSVLTGHLAHLERAL---------------- 178 + ++D + A K + ER Sbjct: 219 IYGITFPKKKMLDEYLVMLEEAKKRDHRKIGKEMELFMFSERVGKGLPIWLPKGTELRLR 278 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLT 237 Q M+ +GY EV P + +G + D + Sbjct: 279 LQGMLRKIQKNYGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMN 338 Query: 238 NLYS-----HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + + K LPLR +R E + G+ R F + + R Sbjct: 339 CPHHCEVFSWKPRSYKDLPLRIAEFGTVYRYEKSG---ELHGLTRVRSFTQDDAHIFCRP 395 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E +E R++ + + K D + D EVW + E Sbjct: 396 EQVKSEFLRVMDIIQTVFKVFDFKNVEAQISLRDPNDREKYIGSDEVWEHSEQSIIE 452 >gi|223997660|ref|XP_002288503.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335] gi|220975611|gb|EED93939.1| threonyl-trna synthetase [Thalassiosira pseudonana CCMP1335] Length = 592 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 94/306 (30%), Gaps = 39/306 (12%) Query: 45 EDIRARRNSNSAQIGQAIAEGNLS-LVDALKNETSTLKE-----QLPILEKEEHEVCSSL 98 +D++A + + IG + K ++ E L ++ E + S Sbjct: 50 QDLKAIKKAMDKIIGADYPIIREEVSREEAKKRIESINEPFKLEILDSIKTEPITIYSIG 109 Query: 99 KKLISCIPNVPLE---EVPIGTSANENILIRSV----------------GKKPSAIHLSR 139 + +E ++P A +++ K P + L + Sbjct: 110 DEWWDLCAGPHVESTGQLPKKAIALQSVAGAYWRGDEKREMLQRIYATAWKDPKQLKLYK 169 Query: 140 EHFEIGEALG------LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 + E + +D + +G + + R + F + H ++ Y Sbjct: 170 KRMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGSTVRRKIEDFWKEAHIAQ-DYD 228 Query: 194 EVSAPLLVRDEAMYGTGQIPKFAD---DMFCTTDGRWLIPTSEVSL-TNLYSHEIIESKS 249 V P + + +G + + D + + I ++ I + Sbjct: 229 IVYTPHIANLDLWKTSGHYDFYREGMFDQMDVENEVYQIKPMNCPFHCLMFKDSIRSYRD 288 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP R+ L +R E G++R F + + E +E +L ++I Sbjct: 289 LPFRWGELGTVYRYERSG---TLHGLMRVRGFTQDDAHIFCLPEQLQSEIVDVLKLTKDI 345 Query: 310 LKRLDL 315 L R Sbjct: 346 LSRFGF 351 >gi|34482934|emb|CAE09933.1| THREONYL-TRNA SYNTHETASE [Wolinella succinogenes] Length = 536 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 10/185 (5%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 R+H ++G +GL FD GA + A L R L + + H + Y V P Sbjct: 141 RDHRKVGTEMGLFIFDED---VGAGLPIWLPAGARLRRRLEAMLTEAHIRRN-YEPVRGP 196 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTTDG---RWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +++ + +G + ++M+ T + P + V +Y + + LPLRF Sbjct: 197 EILKSDLWKISGHYQNYKENMYFTKIDEVEYGIKPMNCVGHIKVYGSGVRSYRELPLRFY 256 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R E G+LR +F + + R E E ++ ++I+ Sbjct: 257 EYGVVHRHEKSGVLH---GLLRVREFTQDDAHIFCRPEQIKDEVVDIVHFVDKIMSAFGF 313 Query: 316 HYRVV 320 +Y + Sbjct: 314 NYEME 318 >gi|332878463|ref|ZP_08446184.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683558|gb|EGJ56434.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 647 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 52/167 (31%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSH 242 +GY +V P + +G + D F L P + +Y+ Sbjct: 288 RYGYQQVMTPHIGGKNLYVTSGHYAHYGKDSFQPIHTPEADEEYMLKPMNCPHHCEIYAW 347 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + K LPLR +R E + G+ R F + + R + E R+ Sbjct: 348 KPRSYKDLPLRIAEFGTVYRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFIRV 404 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + I L+ + D EVW +N E Sbjct: 405 MEIIQIIFGALNFDTFEAQISLRDPNNREKYIGSDEVWEEAENAIIE 451 >gi|330995385|ref|ZP_08319295.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] gi|329575880|gb|EGG57404.1| threonine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] Length = 647 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 52/167 (31%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSH 242 +GY +V P + +G + D F L P + +Y+ Sbjct: 288 RYGYQQVMTPHIGGKNLYVTSGHYAHYGKDSFQPIHTPEADEEYMLKPMNCPHHCEIYAW 347 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + K LPLR +R E + G+ R F + + R + E R+ Sbjct: 348 KPRSYKDLPLRIAEFGTVYRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFIRV 404 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + I L+ + D EVW +N E Sbjct: 405 MEIIQIIFGALNFDTFEAQISLRDPNNREKYIGSDEVWEEAENAIIE 451 >gi|2645487|gb|AAB87409.1| seryl-tRNA synthetase [Methanothermobacter thermautotrophicus] Length = 514 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 87/264 (32%), Gaps = 57/264 (21%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 K G + L RAL +F+I+ G+ P L+ + M + Sbjct: 204 VKKFPGRGQWFYGPKITALHRALEEFLIERIVKPLGFVRCLFPKLIPLDIMNKMRYLEGL 263 Query: 216 ADDMFCT---------------------------------TDGRWLIPTSEVSLTNLYSH 242 + M+ G + P SH Sbjct: 264 PEGMYYCSAPSRDPETFEEFKNELIINREVPMDLLKRGIKDPGYVIAPAQCEPFYQFLSH 323 Query: 243 EIIESKSLPLRFTTLA-PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 E++ ++ LP++F + ++R EAG ++G+ R H F + ELV + ++ +R Sbjct: 324 EVVSAEDLPVKFFDRSGWTYRWEAGG----SKGLDRVHDFQRVELVWLAEPGETEEIRDR 379 Query: 302 MLSCAEEILKRLDLHYRV-----------VSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + + + L+L + + + F Y++ + L G+ + Sbjct: 380 TVELSHDAADELELEWYTEVGDDPFYLEGRKVEERGIEFPDVPKYEMRLSLPGREKGVAV 439 Query: 351 SSCSTCGNF--------QSRRMNS 366 S + G ++R +N Sbjct: 440 VSANVHGTHFIEGFSIREARNLNI 463 >gi|291295577|ref|YP_003506975.1| threonyl-tRNA synthetase [Meiothermus ruber DSM 1279] gi|290470536|gb|ADD27955.1| threonyl-tRNA synthetase [Meiothermus ruber DSM 1279] Length = 652 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 59/178 (33%), Gaps = 8/178 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 G + A + R + +M EHGY V P + Y +G +P + DDM Sbjct: 269 VGKGLPLWLPRGAFIRRQMEDYMYQKE-QEHGYHYVYTPHIANARLYYTSGHLPYYKDDM 327 Query: 220 F----CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 + + +L P + +Y + LPLR +R E G+ Sbjct: 328 YAPIEIEGEEYYLKPMNCPHHHMIYKARPKSYRDLPLRLAEFGTVYRFELSG---TLSGL 384 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 R F + + E R++ +E+ K + L D + K Sbjct: 385 TRARGFTQNDAHIYCSRAQVTEEFIRVIQLFDEVYKDFGISDYWFRLSLPDFENNPEK 442 >gi|228469293|ref|ZP_04054319.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3] gi|228309192|gb|EEK17794.1| threonyl-tRNA synthetase [Porphyromonas uenonis 60-3] Length = 650 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 93/353 (26%), Gaps = 43/353 (12%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 +SE + ++ K L ++ E + R + S +D K T K +L Sbjct: 116 IKSEDLPKIEAKMLELARRKETL--ERKAISKS----------DALDFFKKTGQTYKLEL 163 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEV--------------PIGTSANENILIRSVGK 130 ++ + L L R G Sbjct: 164 INDLEDGTITTYTQGAFTDLCRGPHLPSTAPIKAVKLLSVAGAYWRGDETRRQLTRIYGI 223 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLERALGQF-----M 182 L E+ + E D + K L V G L R Sbjct: 224 TFPKKKLLDEYLALLEEAKKRDHRKIGKELELFAFSQRVGQGLPLWLPRGTQLRLKLEDF 283 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYS 241 + +GY +V P + E +G K+ AD T + + + Sbjct: 284 LKRIQKRYGYQQVMTPHIGNVELYKTSGHYAKYGADSFQVITTPQEGEAFMLKPMNCPHH 343 Query: 242 HE-----IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 E + LP+R +R E + G+ R F + + R + Sbjct: 344 CEIYKLKPHSYRDLPVRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCRPDQVK 400 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E +++ I + LD + + E W + E Sbjct: 401 EEFLKVMEIIFIIFRALDFENFEAQISLRSQTDRSKYIGSEENWDRAEQAIIE 453 >gi|172036410|ref|YP_001802911.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|171697864|gb|ACB50845.1| threonyl-tRNA synthetase [Cyanothece sp. ATCC 51142] Length = 666 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 51/160 (31%), Gaps = 8/160 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +G A + + + + H + GY + P + + +G + ++M Sbjct: 286 AGGGLVFWHPRGAMMRYLIEDYWRNAHLED-GYQFLYTPHVANLDLWKTSGHWDFYRENM 344 Query: 220 FCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 F + + ++ + PL++ L +R E G+ Sbjct: 345 FEAMAVEHQTYQIKPMNCPFHVLTYKDDLHSYREFPLKWAELGTVYRYEKSGVLH---GL 401 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E E +L+ E+IL Sbjct: 402 MRVRGFTQDDAHIFCLPEQIADEILGVLNLTEKILSDFGF 441 >gi|312871712|ref|ZP_07731800.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|312872982|ref|ZP_07733042.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|312874225|ref|ZP_07734259.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|315653646|ref|ZP_07906566.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325912186|ref|ZP_08174584.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|329920107|ref|ZP_08276938.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G] gi|311090295|gb|EFQ48705.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311091504|gb|EFQ49888.1| threonine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|311092654|gb|EFQ51010.1| threonine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|315489008|gb|EFU78650.1| threonine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|325476136|gb|EGC79304.1| threonine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|328936561|gb|EGG33005.1| threonine--tRNA ligase [Lactobacillus iners SPIN 1401G] Length = 643 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 113/336 (33%), Gaps = 21/336 (6%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE-Q 83 ++ + L+++ + ++K E I S + + + ++ LK E + + Sbjct: 113 IKASELPDLEKEMQKIVKNGEKI--EYKIVSKSELLDLFKDDPYKLELLKEEADEVAVYK 170 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 L + + + ++ +L R G + + Sbjct: 171 LEDFVDFGFNALLMNTGKLKHFKLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQ 230 Query: 144 IGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 E + D + GA A + R + +++ID ++ GY Sbjct: 231 RREDIKERDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVAD-GYQH 289 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKS 249 V P+L+ +A +G + +DMF D L P + S +Y+H I + Sbjct: 290 VYTPVLMNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRE 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R L R E A G+ R + + + + +E ++L E+ Sbjct: 350 LPIRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEV 406 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + D+ L D + + E+W Q Sbjct: 407 YRDFDITDYYFRLSYRDPKNTDKYFANDEMWERSQK 442 >gi|261368006|ref|ZP_05980889.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282569994|gb|EFB75529.1| threonine--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 596 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 81/242 (33%), Gaps = 11/242 (4%) Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 I A N +K R+H +IG+ + L D L G + + Sbjct: 167 TRINGVAFHNQEELEEWEKQQQEARERDHRKIGKEMRLFMTDD---LVGRGLPMFLPNGY 223 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG---RWLI 229 + + L ++ E GY V P + +G + ++MF + +++ Sbjct: 224 IVWQQLEDYIKQKE-RERGYLHVMTPCIGTVNLYRTSGHWDHYRENMFPAMEMEGESYVL 282 Query: 230 PTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 +Y+++ + LP+R +A FR E+ +G+ R F + + Sbjct: 283 RPMNCPHHMMIYANQPHSYRQLPIRIGEIAHDFRYESSG---TLKGIERGRHFCQNDAHL 339 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 E E + + ++ K + L D D +W + R Sbjct: 340 FVTPEQIKDEVAAVCALIFDVYKDFHITDYRCVLSLRDPADKKKYHDDDAMWNHAEQALR 399 Query: 349 EI 350 E+ Sbjct: 400 EV 401 >gi|325912604|ref|ZP_08174987.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B] gi|325478025|gb|EGC81154.1| threonine--tRNA ligase [Lactobacillus iners UPII 60-B] Length = 643 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 113/336 (33%), Gaps = 21/336 (6%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE-Q 83 ++ + L+++ + ++K E I S + + + ++ LK E + + Sbjct: 113 IKASELPDLEKEMQKIVKNGEKI--EYKIVSKSELLDLFKDDPYKLELLKEEADEVAVYK 170 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 L + + + ++ +L R G + + Sbjct: 171 LEDFVDFGFNALLMNTGKLKHFKLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQ 230 Query: 144 IGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 E + D + GA A + R + +++ID ++ GY Sbjct: 231 RREDIKERDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVAD-GYQH 289 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKS 249 V P+L+ +A +G + +DMF D L P + S +Y+H I + Sbjct: 290 VYTPVLMNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRE 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R L R E A G+ R + + + + +E ++L E+ Sbjct: 350 LPIRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEV 406 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + D+ L D + + E+W Q Sbjct: 407 YRDFDITDYYFRLSYRDPKNTDKYFANDEMWERSQK 442 >gi|91215264|ref|ZP_01252236.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] gi|91186869|gb|EAS73240.1| threonyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] Length = 648 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYS-----H 242 GY V +P + + E +G K+ +D F + + + Sbjct: 287 NAGYQPVVSPHIGQKELYMTSGHFQKYGEDSFQPIKTPQDGEEYLLKPMNCPHHCEIYNA 346 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LP R+ +R E + G+ R F + + E E +++ Sbjct: 347 QTWSYRDLPQRYAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCTPEQLDEEFKKV 403 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + + L + D + E W Sbjct: 404 IDLVLYVFGSLGFENFTAQVSLRDPENPSKYIGSDENW 441 >gi|313202757|ref|YP_004041414.1| ser-tRNA(thr) hydrolase; threonyL-tRNA synthetase [Paludibacter propionicigenes WB4] gi|312442073|gb|ADQ78429.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Paludibacter propionicigenes WB4] Length = 648 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 45/167 (26%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHEII-- 245 Y +V P + + +G K+ D + + EI Sbjct: 287 RFDYQQVMTPHIGNKQLYVTSGHYAKYGKDSFQPIHTPEEGEEYLLKPMNCPHHCEIYKF 346 Query: 246 ---ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LP+R +R E + G+ R F + + R + E ++ Sbjct: 347 KPRSYKELPVRLAEFGTVYRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFLKV 403 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + I L+ + D E W + E Sbjct: 404 MDIIFIIFNALEFENFEAQISLRDPNNREKYIGSDENWEKAEQSIIE 450 >gi|255035014|ref|YP_003085635.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] gi|254947770|gb|ACT92470.1| threonyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] Length = 647 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 68/242 (28%), Gaps = 17/242 (7%) Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTG 169 +L R G E+ + E D R K L V G Sbjct: 208 AYWRNKQENKMLTRIYGITFPKQKELEEYVTLMEEAKKRDHRRLGKELELFAFSEKVGQG 267 Query: 170 HLAHLERALG-----QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-- 222 L + Q + S GY V P + + +G K+ D F Sbjct: 268 LPLWLPKGAMLRERLQAFLSKAQSRAGYVPVITPHIGSKDLYVTSGHWDKYGKDSFQPIK 327 Query: 223 ----TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + L P + +Y K LPLRF+ +R E + G+ R Sbjct: 328 TPNLDEEYMLKPMNCPHHCEIYKTSPRSYKDLPLRFSEFGTVYRYEQSG---ELHGLTRV 384 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 F + + R + E R++ + K L + + D E Sbjct: 385 RGFTQDDAHIFCRPDQVKEEFIRVIDLVLYVFKSLGFNDYSAQISLRDPNNKEKYIGKDE 444 Query: 339 VW 340 W Sbjct: 445 DW 446 >gi|149195433|ref|ZP_01872516.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] gi|149134438|gb|EDM22931.1| threonyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] Length = 613 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 93/289 (32%), Gaps = 25/289 (8%) Query: 53 SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSS--LKKLISCIPNVPL 110 S + + + LK S + + E+ K + + + Sbjct: 112 EISKDEAIEKFKDDELKQEVLKMIPSDVVSIYKQGDFEDLCRGPHLPNTKYLHNVKLQKV 171 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL---------SG 161 +G +N+ +L R G + +E+ + E D + K Sbjct: 172 AGAYLGGDSNKEMLTRVYGTAFATKEALQEYLKRLEEALKRDHRKLGKELELWLFDEEVA 231 Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 + A L L + + H + Y V P ++R E +G + ++M+ Sbjct: 232 PGMPIWLPRGAMLRANLEKLLFSAHI-QREYEPVRGPEILRSEMWKISGHYYNYKENMYF 290 Query: 222 T-----TDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRD 271 T + + + ++ H++ K LPLRF R E Sbjct: 291 TEIAHDDNQKQAEEYGIKPMNCLSHVKIFGHKVRSYKELPLRFFEFGTVHRHEKSGVLH- 349 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 G+LR +F + + R E E ++L + I++R Y + Sbjct: 350 --GLLRVREFTQDDAHIFCRPEQIEEEVIKVLDFVDSIMQRFGFKYEME 396 >gi|307634865|gb|ADI84351.2| threonyl-tRNA synthetase [Geobacter sulfurreducens KN400] Length = 645 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 61/161 (37%), Gaps = 6/161 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 V+ + R L + + GY V P +++ E +G + ++M+ T Sbjct: 271 AGFVIWHPKGAMLRTLLEDFERREHLKRGYDIVVGPQILKTELWQRSGHYDNYRENMYFT 330 Query: 223 T---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 G + P + +S +Y ++ + LPLRF L R E G+LR Sbjct: 331 EVEGQGFGIKPMNCLSHMMIYKSQLRSYRDLPLRFFELGTVHRHERAGVLH---GLLRVR 387 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 F + + + E E + ++S +++ Y + Sbjct: 388 CFTQDDAHILCTPEQLDAEIKGVISFVNDVMGIFGFDYEME 428 >gi|19114946|ref|NP_594034.1| mitochondrial threonine-tRNA ligase [Schizosaccharomyces pombe 972h-] gi|3183172|sp|O13969|SYTM_SCHPO RecName: Full=Probable threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; Flags: Precursor gi|2330792|emb|CAB11266.1| mitochondrial threonine-tRNA ligase [Schizosaccharomyces pombe] Length = 473 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 19/202 (9%) Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 + H + L F+ HG+ E+ PL+ + + +G + + Sbjct: 62 ILTPGSIFFLPHGTRIYNRLVDFLR-AQYQIHGFEEIITPLIFKKDLWEKSGHWQNYEKE 120 Query: 219 MFCTTDGRWLIPTSEVSL-----------TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 +F + R + + +Y+ K LPLRF +P R+EA Sbjct: 121 IFRVEESRNVEDEHSNATYGLKPMNCPGHCIVYASTERSYKELPLRFADFSPLHRNEASG 180 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 A G+ R F + + E E + L+ +++ L ++ + L T Sbjct: 181 ALS---GLTRLRCFHQDDGHIFCSPESIKDEIKNTLTFVKQVYSLLGMNKLKLYLSTR-- 235 Query: 328 GFSACKTYDLEVWLAGQNLYRE 349 L+ W +N RE Sbjct: 236 --PEEHIGSLDTWNEAENGLRE 255 >gi|298291991|ref|YP_003693930.1| threonyl-tRNA synthetase [Starkeya novella DSM 506] gi|296928502|gb|ADH89311.1| threonyl-tRNA synthetase [Starkeya novella DSM 506] Length = 666 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 99/343 (28%), Gaps = 34/343 (9%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDI------RARRNSNSAQIGQAIAEGNLSLVDALK 74 R+ E ++++K R ++ + R A+ G+A + LVDA+ Sbjct: 123 RNEPFSLEDFPAIEKKMREIVARDASFTKEVWDREETKRVFAEKGEAFK---VELVDAIP 179 Query: 75 NETSTLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + +K +Q + S+ K+ + + A +L R G Sbjct: 180 AD-QQIKIYKQGNWFDLCRGPHMPSVGKVGDAFKLMKVAGAYWRGDAKNPMLTRIYGTAW 238 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEH- 190 + E D R + G +L Sbjct: 239 RDREELDAYILQLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHPKGWNLFQNLVAYMRR 298 Query: 191 ----GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL----IPTSEVSLTN---- 238 Y+EV+AP ++ +G + D+MF + + Sbjct: 299 RLAADYSEVNAPQVLDKSLWETSGHWGWYKDNMFKVQPAGDAEDNDRVYALKPMNCPGHV 358 Query: 239 -LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 ++ H + + LP+R R E A G++R F + + EE Sbjct: 359 QIFKHGLKSYRDLPMRLAEFGAVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQMAA 415 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 E ++ VV L T + EVW Sbjct: 416 ECLKINELILSTYADFGFEEIVVKLSTR----PEKRVGSDEVW 454 >gi|166365900|ref|YP_001658173.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843] gi|166088273|dbj|BAG02981.1| threonyl-tRNA synthetase [Microcystis aeruginosa NIES-843] Length = 618 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 8/160 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +G A + + + H E GY + P L + +G + D+M Sbjct: 238 AGGGLVFWHPRGATMRYLIEDYWRQAHL-EAGYQFLYTPHLANLDLWKTSGHWDFYRDNM 296 Query: 220 FCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 F + + + +++ + PLR+ L +R E G+ Sbjct: 297 FEAIELEQQSYQIKPMNCPFHVLTYQNDLHSYREFPLRWAELGTVYRYERSGVLH---GL 353 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E E +L+ E+IL Sbjct: 354 MRVRGFTQDDAHIFCLPEQIAAEILGVLNLTEKILSDFGF 393 >gi|39996615|ref|NP_952566.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|73919793|sp|Q74D04|SYT_GEOSL RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|39983496|gb|AAR34889.1| threonyl-tRNA synthetase [Geobacter sulfurreducens PCA] Length = 636 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 61/161 (37%), Gaps = 6/161 (3%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT 222 V+ + R L + + GY V P +++ E +G + ++M+ T Sbjct: 262 AGFVIWHPKGAMLRTLLEDFERREHLKRGYDIVVGPQILKTELWQRSGHYDNYRENMYFT 321 Query: 223 T---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 G + P + +S +Y ++ + LPLRF L R E G+LR Sbjct: 322 EVEGQGFGIKPMNCLSHMMIYKSQLRSYRDLPLRFFELGTVHRHERAGVLH---GLLRVR 378 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 F + + + E E + ++S +++ Y + Sbjct: 379 CFTQDDAHILCTPEQLDAEIKGVISFVNDVMGIFGFDYEME 419 >gi|220928797|ref|YP_002505706.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|219999125|gb|ACL75726.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 635 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 85/310 (27%), Gaps = 36/310 (11%) Query: 41 IKKIEDIRARRNSNSAQIGQAIAEG----NLSLVDALKNETSTLKEQLPILEKEEHEVCS 96 I++++ I + E + ++ + K +L + + E+ Sbjct: 114 IEELDSIEKEMEKIVKE--DLKLERFVLPRNEAIKLMEEKGEPYKAELIMDLPQGEEISF 171 Query: 97 SLKKLISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + + + P + +L R G E+ Sbjct: 172 YKQGEFTDLCAGPHLTGTGRLKAVKLLSVAGAYWRGNEKNKMLQRIYGTAFPKKSQLDEY 231 Query: 142 FEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 E D + + F L L + H + GY Sbjct: 232 LFRIEEAKKRDHRKLGRELDLFDILDEGPGFPFFMPKGMVLRNLLEDYWRSEH-KKAGYQ 290 Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV---SLTNLYSHEIIESKSL 250 E+ P+++ E +G + ++M+ + ++ ++ + L Sbjct: 291 EIKTPVILNKELWLRSGHWDNYKNNMYTVAIDEQDCAIKPMNCPGGILVFKRKLHSYRDL 350 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 P R L R E A G++R F + + E E +++ ++ Sbjct: 351 PQRMGELGLVHRHELSGALH---GLMRVRCFTQDDAHIFMTPEQITDEVTGVINLIDDFY 407 Query: 311 KRLDLHYRVV 320 Y V Sbjct: 408 SVFGFKYNVE 417 >gi|119383706|ref|YP_914762.1| threonyl-tRNA synthetase [Paracoccus denitrificans PD1222] gi|166225473|sp|A1B0M2|SYT_PARDP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|119373473|gb|ABL69066.1| Ser-tRNA(Thr) hydrolase [Paracoccus denitrificans PD1222] Length = 648 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 52/442 (11%), Positives = 118/442 (26%), Gaps = 73/442 (16%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++++ + +I + +R A+G ++ L Sbjct: 110 DRAEPFTPEDLGAIEQRMKQIIAARDPVRTEVWDRDRARAHYEAQGEPFKIELL------ 163 Query: 80 LKEQLPILEKEEHEVCSSLKK-----LISCIPNVPLEEVPIGT---------------SA 119 +++P E + + VP + + Sbjct: 164 --DRIPEGEPIRMYWHGDWQDLCRGPHLQHTGQVPADAFKLTHVAGAYWLGDASRPMLQR 221 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + R+ + + + E + + + A V Sbjct: 222 IYGVAFRNRDDLKAHLTMLEEAAKRDHRKLGREMELFHFQEEAPGMVFWHPNGWSIYREL 281 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVS 235 + + Y E+ P +V +G + ++MF + + Sbjct: 282 EAYMRRRLIRADYKEIKTPQVVDRILWEKSGHWEAYRENMFIVEVDEEGAKEKRINALKP 341 Query: 236 LTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + ++ + LPLR R E G++R F + + Sbjct: 342 MNCPCHVQVYNQGLKSYRDLPLRLAEFGSCHRYEPSG---SMHGLMRVRGFVQDDAHIFC 398 Query: 291 REEDSFTEHERMLSCAEEILKRLDL-HYRVVSLCTGDLGFSACKTYD-LEVWL------- 341 E+ E + + K L + + D+ + + +D E L Sbjct: 399 TEDQIEAECAGFIGLLSSVYKDLGFEKFDIKLSTRPDVRVGSDEIWDKAEAALKGAIEHL 458 Query: 342 -------AGQNLYR----------EISSCSTCGNFQS-----RRMNSRYRDPNSKSLKFT 379 G + I CG FQ +R+ + Y + Sbjct: 459 DLPYEVNPGDGAFYGPKLDFKLTDAIGREWQCGTFQCDFNLPQRLEAEYVGEDGAKHMPV 518 Query: 380 HTLNGSGVAV-GRCLIAILENY 400 L+ + + R + ++ENY Sbjct: 519 -MLHRAVLGSFERFIGILIENY 539 >gi|289617913|emb|CBI55490.1| unnamed protein product [Sordaria macrospora] Length = 497 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 18/150 (12%) Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------------DG 225 + +G+ EV P + + +G + +ADDMF T D Sbjct: 90 EYLRKQYVHYGFQEVITPTIYKKALWAKSGHLENYADDMFTVTSTSPSRADVTEAGEVDE 149 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 L P + +++ + + LP+R+ +P R+E A G+ R +F + + Sbjct: 150 YGLKPMNCPGHCLIFAAQKRSYRDLPIRYADFSPLHRNEISGALS---GLTRVRRFHQDD 206 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDL 315 R E + L + K L Sbjct: 207 GHIFCRPNQIEDEISKTLEFIRRVYKDFRL 236 >gi|164427281|ref|XP_964988.2| threonyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa OR74A] gi|157071680|gb|EAA35752.2| threonyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa OR74A] Length = 498 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 18/150 (12%) Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------------DG 225 + +G+ EV P + + +G + +ADDMF T D Sbjct: 91 EYLRKQYVHYGFQEVITPTIYKKALWAKSGHLENYADDMFTVTSTSPSRADVTEAGEADE 150 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 L P + +++ + + LP+R+ +P R+E A G+ R +F + + Sbjct: 151 YGLKPMNCPGHCLIFAAQKRSYRDLPIRYADFSPLHRNEISGALS---GLTRVRRFHQDD 207 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDL 315 R E + L + K L Sbjct: 208 GHIFCRPNQIEDEISKTLEFIRRVYKDFRL 237 >gi|38567275|emb|CAE76565.1| related to threonine--tRNA ligase [Neurospora crassa] Length = 497 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 18/150 (12%) Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------------DG 225 + +G+ EV P + + +G + +ADDMF T D Sbjct: 90 EYLRKQYVHYGFQEVITPTIYKKALWAKSGHLENYADDMFTVTSTSPSRADVTEAGEADE 149 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 L P + +++ + + LP+R+ +P R+E A G+ R +F + + Sbjct: 150 YGLKPMNCPGHCLIFAAQKRSYRDLPIRYADFSPLHRNEISGALS---GLTRVRRFHQDD 206 Query: 286 LVSITREEDSFTEHERMLSCAEEILKRLDL 315 R E + L + K L Sbjct: 207 GHIFCRPNQIEDEISKTLEFIRRVYKDFRL 236 >gi|108804139|ref|YP_644076.1| Ser-tRNA(Thr) hydrolase/threonyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] gi|123368184|sp|Q1AWG4|SYT_RUBXD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|108765382|gb|ABG04264.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] Length = 639 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 78/254 (30%), Gaps = 49/254 (19%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEI 244 HGY V LV + +G + + D MF L P + S L++ Sbjct: 285 RHGYQHVWTGHLVNERLYARSGHLEHYRDAMFPPMRDGEVSYRLKPMNCPSHMTLFNSRP 344 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LP+R+ A +R E + G+ R + + EE E R L+ Sbjct: 345 RSYRELPVRYAEFATLYRYEKSG---ELSGLTRVRSLTQDDAHVFCTEEQVQEEFARALA 401 Query: 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW--------------------LAGQ 344 E+L V L D D E W G+ Sbjct: 402 IIREVLDAYGFTDYRVRLSLRD-PEGGKYIADEEKWGRAEGALRAALDAAGIDYEPAPGE 460 Query: 345 NLY--------------REISSCSTCGNF-QSRRMNSRYRDPNSK--SLKFTH-TLNGSG 386 + RE + +F Q R+ Y + + + H + G+ Sbjct: 461 AAFYGPKADFMARDVLGREWQLSTIQVDFIQPGRLGCEYVGEDGERHTPVLLHRAVTGT- 519 Query: 387 VAVGRCLIAILENY 400 R + ++E+Y Sbjct: 520 --TERFMAVLIEHY 531 >gi|253577580|ref|ZP_04854892.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843049|gb|EES71085.1| threonyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 645 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 8/199 (4%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 L G + A + R L ++++D+ GY V P+L + +G + Sbjct: 259 NNLVGQGLPIWLPKGATVRRTLERYIVDIE-ERLGYQHVYTPVLGNVDLYKTSGHWEHYQ 317 Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSH----EIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 +DMF + ++ + LP+R L R E A Sbjct: 318 EDMFPKMAIDTEEFVLRPMNCPHHMMVYKSDMRSYRDLPIRIAELGMQHRYEMSGALT-- 375 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 G+ R + R + E +R+L +++ +H L D + Sbjct: 376 -GLHRVRSMTLNDAHIFCRLDQIKDEFKRVLDLIKQVYNDFGIHEYRFRLSYRDPQDTEK 434 Query: 333 KTYDLEVWLAGQNLYREIS 351 + E+W Q + RE+ Sbjct: 435 YYQNDEMWNTAQRMLREVV 453 >gi|159028099|emb|CAO87176.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 618 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 8/160 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +G A + + + H E GY + P L + +G + D+M Sbjct: 238 AGGGLVFWHPRGATMRYLIEDYWRQAHL-EAGYQFLYTPHLANLDLWKTSGHWDFYRDNM 296 Query: 220 FCTTDGRWLIPTSEVSLTNLY----SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 F + + + +++ + PLR+ L +R E G+ Sbjct: 297 FEAIELEQQSYQIKPMNCPFHVLTYQNDLHSYREFPLRWAELGTVYRYERSGVLH---GL 353 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E E +L+ E+IL Sbjct: 354 MRVRGFTQDDAHIFCLPEQIAAEILGVLNLTEKILSDFGF 393 >gi|332300493|ref|YP_004442414.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] gi|332177556|gb|AEE13246.1| threonyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 650 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 96/353 (27%), Gaps = 43/353 (12%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 +SE + ++ K L ++ E + R + S +D K K +L Sbjct: 116 IKSEDLPKIEAKMLELARRKETL--ERKAISKS----------DALDFFKKTGQGYKLEL 163 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEV-PIGTSANENILIRSVGKKPSAIHLSR---- 139 ++ + L PI ++ + L+R Sbjct: 164 INDLEDGTITTYTQGAFTDLCRGPHLPSTAPIKAVKLLSVAGAYWRGDETRKQLTRIYGI 223 Query: 140 ---------EHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLERALGQF-----M 182 E+ + E D + K L V G L R Sbjct: 224 TFPKKKLLDEYLALLEEAKKRDHRKIGKELELFAFSQRVGQGLPLWLPRGTQLRLKLEDF 283 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYS 241 + +GY +V P + E +G K+ AD T + + + Sbjct: 284 LKRIQKRYGYQQVMTPHIGNVELYKTSGHYAKYGADSFQVITTPQEGEAFMLKPMNCPHH 343 Query: 242 HE-----IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 E + LP+R +R E + G+ R F + + R + Sbjct: 344 CEIYRLKPHSYRDLPVRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCRPDQVK 400 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E +++ I + LD + + E W + E Sbjct: 401 EEFLKVMDIIFIIFRALDFENFEAQISLRSQTDRSKYIGSEENWDRAEQAIIE 453 >gi|313887217|ref|ZP_07820913.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] gi|312923446|gb|EFR34259.1| threonine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] Length = 650 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 96/353 (27%), Gaps = 43/353 (12%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 +SE + ++ K L ++ E + R + S +D K K +L Sbjct: 116 IKSEDLPKIEAKMLELARRKETL--ERKAISKS----------DALDFFKKTGQGYKLEL 163 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEV-PIGTSANENILIRSVGKKPSAIHLSR---- 139 ++ + L PI ++ + L+R Sbjct: 164 INDLEDGTITTYTQGAFTDLCRGPHLPSTAPIKAVKLLSVAGAYWRGDETRKQLTRIYGI 223 Query: 140 ---------EHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLERALGQF-----M 182 E+ + E D + K L V G L R Sbjct: 224 TFPKKKLLDEYLALLEEAKKRDHRKIGKELELFAFSQRVGQGLPLWLPRGTQLRLKLEDF 283 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYS 241 + +GY +V P + E +G K+ AD T + + + Sbjct: 284 LKRIQKRYGYQQVMTPHIGNVELYKTSGHYAKYGADSFQVITTPQEGEAFMLKPMNCPHH 343 Query: 242 HE-----IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 E + LP+R +R E + G+ R F + + R + Sbjct: 344 CEIYRLKPHSYRDLPVRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCRPDQVK 400 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E +++ I + LD + + E W + E Sbjct: 401 EEFLKVMDIIFIIFRALDFENFEAQISLRSQTDRSKYIGSEENWDRAEQAIIE 453 >gi|323344262|ref|ZP_08084488.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269] gi|323094991|gb|EFZ37566.1| threonine--tRNA ligase [Prevotella oralis ATCC 33269] Length = 654 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 50/177 (28%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLT 237 Q M+ GY EV P + +G + D + Sbjct: 279 LQDMLRKIQKRFGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMN 338 Query: 238 NLYS-----HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + + K LPLR +R E + G+ R F + + R Sbjct: 339 CPHHCEVFAWKPRSYKDLPLRIAEFGTVYRYEKSG---ELHGLTRVRSFTQDDAHIFCRP 395 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + +E R++ + + K + + D EVW + +E Sbjct: 396 DQVKSEFLRVMDIIQTVFKIFNFDNFEAQISLRDPKDREKYIGADEVWEESEQAIKE 452 >gi|15606769|ref|NP_214149.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5] gi|8928367|sp|O67583|SYT_AQUAE RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|2984004|gb|AAC07549.1| threonyl-tRNA synthetase [Aquifex aeolicus VF5] Length = 638 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 103/311 (33%), Gaps = 22/311 (7%) Query: 22 HLEPQSEYILSLDEKNRILIKK-IEDIRAR--RNSNSAQIGQAIAEGNLSLVDAL-KNET 77 + E + +++K + +I++ +R R + + + ++ + + E Sbjct: 110 GHKITEEDLPKIEQKMKEIIERDYPILRRELSREEAIKLFDKLKEKYKIDIIKEIPEEEV 169 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 ++ EQ ++ + S K + +++ L R G + Sbjct: 170 ISVYEQGDFIDLCKGPHLPSTGKAGAFKLTSIS-GAYWKGRSDQPQLTRIYGIAYWSDKE 228 Query: 138 SREHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTS 188 +E + E + D R K GA + A + L ++ + H Sbjct: 229 VKERLKFYEEVKKRDHRRLGKELEFFTIDDNVGAGLILWLPRGAIYRKVLEDYLREEHL- 287 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHEI 244 + GY V P + + + +G + + +MF + + ++ P + +Y Sbjct: 288 KRGYQLVYTPHVGKSKLWETSGHLECYKQNMFPSMKIDEEEYYVKPMNCPFHIAIYKSRT 347 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 K LPL+ L +R E G+LR F + + + E L Sbjct: 348 RSYKELPLKLFELGTVYRYELSGVLH---GLLRVRGFTQDDAHIVCTPEQVNDVIRETLD 404 Query: 305 CAEEILKRLDL 315 A LK Sbjct: 405 FALSTLKDFGF 415 >gi|87124051|ref|ZP_01079901.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917] gi|86168620|gb|EAQ69877.1| threonyl-tRNA synthetase [Synechococcus sp. RS9917] Length = 612 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 83/304 (27%), Gaps = 38/304 (12%) Query: 46 DIRARRNSNSAQIG-----QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 D++A R I + IA +K + K ++ +E + + ++ Sbjct: 82 DLKAIRKEMIKIINRKLPLERIAVSRDEAEAKIKAQNEPYKLEILAGLQEPITLYTLGEQ 141 Query: 101 LISCIPNVPLEEVPIGTSANEN------ILIRSVGKKPSAIHLSREHFEIGEALGLM--- 151 ++ R K + +E E L Sbjct: 142 WWDLCAGPHVDNTSELNPKAFALESVAGAYWRGDETKAQLQRIYGTAWETPEQLAEYQRR 201 Query: 152 ----------------DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 D +GA A + + F H E GY + Sbjct: 202 KEEALRRDHRRLGKDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAH-FEGGYDLL 260 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLP 251 P + +G + +++ MF + + + + LP Sbjct: 261 YTPHVADIGLWKTSGHLDFYSESMFGPMQVDEREYQLKPMNCPFHVLTYASRLRSYRELP 320 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 +R+ L +R E G++R F + + E E R+L+ E IL Sbjct: 321 IRWAELGTVYRYERPG---VMHGLMRVRGFTQDDAHVFCLPEQISDEILRILNLTETILS 377 Query: 312 RLDL 315 D Sbjct: 378 AFDF 381 >gi|320102238|ref|YP_004177829.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Isosphaera pallida ATCC 43644] gi|319749520|gb|ADV61280.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Isosphaera pallida ATCC 43644] Length = 752 Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 3/112 (2%) Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 +Y + + LP+R +R E + G+ R F + + E +E Sbjct: 427 IYKAQQRSYRDLPVRLAEFGTVYRYEQSG---ELSGLTRVRGFTQDDAHLFCTPEQVRSE 483 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + + +L+ L L V L D + D +WL + R + Sbjct: 484 FAETMRLTQFVLESLGLSDYRVRLSRSDPDDPKFQGADASIWLKAEADIRAV 535 >gi|291550699|emb|CBL26961.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus torques L2-14] Length = 650 Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 89/286 (31%), Gaps = 24/286 (8%) Query: 50 RRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLKEQLPILEKEEHEV-----CSSLKKLIS 103 R + S + A + L + E++ + + K I Sbjct: 133 ERFTKSREDAIAFFKEKNEPYKVELIEDLPE-GEEISFYSQGDWVDLCAGPHLMSTKGIK 191 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD---FDRATKLS 160 + N+++L R G + +EH E D R KL Sbjct: 192 AFKLLSSSGAYWRGDENKHMLTRIYGTAYATKDELKEHLTQLEEAKKRDHNKLGREMKLF 251 Query: 161 GARFSVLTGHLAHLERALG-----QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 + G + + Q I+ ++ GY PL+ + + +G + Sbjct: 252 TTVDVIGQGLPLIMPNGVIIMQELQRWIEDEEAKRGYIRTKTPLMAKSDLYKISGHWDHY 311 Query: 216 ADDMF-----CTTDGRWLIPTSEVSLTNL-YSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + MF + + Y E + LPLR+ + FR+E Sbjct: 312 KEGMFVLGDEEKDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYGETSTLFRNEDSG-- 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + G+ R QF E + R + E + ++ A+ L+ L + Sbjct: 370 -EMHGLTRVRQFTISEGHLVVRPDQMVKEFKDCIALAQYCLQVLGV 414 >gi|156053914|ref|XP_001592883.1| hypothetical protein SS1G_05805 [Sclerotinia sclerotiorum 1980] gi|154703585|gb|EDO03324.1| hypothetical protein SS1G_05805 [Sclerotinia sclerotiorum 1980 UF-70] Length = 536 Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 22/182 (12%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + G+ + G + S G+ EV P + + +G Sbjct: 75 FTTSPYSPGSPLFLPKGARMFK---ALTEFLSAQYSHFGFEEVITPTIYKKSLWEKSGHW 131 Query: 213 PKFADDMFCT----------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 +A+DM+ + L P + +++ + + +P+R+T Sbjct: 132 ENYAEDMYSVIGRGASGETVEGQKGENEEYGLKPMNCPGHCLIFASKQRSYREMPIRYTD 191 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 +P R+E A G+ R +F + + R E + L + L L Sbjct: 192 FSPLHRNEISGALS---GLTRVRRFHQDDGHIFCRPSQIKEEISKTLEFVKMTYSTLGLG 248 Query: 317 YR 318 Sbjct: 249 MN 250 >gi|110638045|ref|YP_678253.1| threonyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] gi|123354610|sp|Q11UK3|SYT_CYTH3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|110280726|gb|ABG58912.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Cytophaga hutchinsonii ATCC 33406] Length = 645 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 56/198 (28%), Gaps = 10/198 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADD 218 G + A L L F+ GY V P + + +G K+ D Sbjct: 259 VGMGLPLWLPKGALLRERLENFLKKAQV-RAGYQPVVTPHIGNKQLYVTSGHFDKYGKDS 317 Query: 219 MFCTTDGRWLIPTSEVSLTNLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + + EI K LP+RF +R E + Sbjct: 318 FQPIFTPHEGEQFLLKPMNCPHHCEIYKTKPRSYKDLPIRFAEFGTVYRYEQSG---ELH 374 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 G+ R F + + R + E +++ + K L + + D Sbjct: 375 GLTRVRGFTQDDAHIFCRPDQVKEEFLKVIDLVLYVFKVLGFNDYTAQISLRDPENKDKY 434 Query: 334 TYDLEVWLAGQNLYREIS 351 + E W + E S Sbjct: 435 IGEDEQWQKAEQAIIEAS 452 >gi|85716379|ref|ZP_01047351.1| threonyl-tRNA synthetase [Nitrobacter sp. Nb-311A] gi|85696736|gb|EAQ34622.1| threonyl-tRNA synthetase [Nitrobacter sp. Nb-311A] Length = 679 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 97/317 (30%), Gaps = 28/317 (8%) Query: 21 RHLEPQSEYILSLDEKNRILIKK-----IEDIRARRNSNSAQIGQAIAEG-NLSLVDAL- 73 R+ E ++++K R +I + + + + Q+ + E + LVDA+ Sbjct: 133 RNEPFSVEDFAAIEKKMREIIARDKPFTKDVWDREK---TKQVFRDKGETFKVELVDAIP 189 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 NE + Q + +S K+ + + + +N +L R G + Sbjct: 190 GNEPIKIYYQGDWFDLCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFA 249 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS----- 188 + + E D + + G A G + + Sbjct: 250 NQADLDAYLKQIEEAEKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQAVIAYMRRR 309 Query: 189 -EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEVSLTN 238 Y EV+AP ++ +G + ++MF + P + Sbjct: 310 LAEDYDEVNAPQMLDKALWETSGHWEWYRENMFAAQSAGDEAEDKRWFTIKPMNCPGHVQ 369 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L+ H + + LPLR R E A G++R F + + EE E Sbjct: 370 LFKHGLKSYRDLPLRLAEFGVVHRYEPSGA---MHGLMRVRGFTQDDAHVFCTEEQLADE 426 Query: 299 HERMLSCAEEILKRLDL 315 ++ Sbjct: 427 CLKINELILSTYADFGF 443 >gi|154490252|ref|ZP_02030513.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC 43184] gi|154089144|gb|EDN88188.1| hypothetical protein PARMER_00484 [Parabacteroides merdae ATCC 43184] Length = 651 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 94/339 (27%), Gaps = 23/339 (6%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEGNLSLVDALKNETSTLKEQLPIL 87 +++ K L+ K E+I+ R S + + L +E K Sbjct: 117 DFPAIEAKMLELVAKKEEIK--RQDISKADALKMFGDRGEEYKTELISELEDGKITTYTQ 174 Query: 88 EKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 + + + + L+R G + E+ + Sbjct: 175 GAFTDLCRGPHLPNTSYLKAVKIMSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLAL 234 Query: 145 GEALGLMDFDRATK---LSGARFSVLTGHLAHLERALGQF-----MIDLHTSEHGYTEVS 196 E D + K L +V G L R + ++GY +V Sbjct: 235 MEEAKKRDHRKIGKELELFTFSTAVGAGLPLWLPRGTQLRLKLEDFLKRIQKKYGYQQVM 294 Query: 197 APLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHEII-----ESKSL 250 P + + +G K+ D + + + EI K L Sbjct: 295 TPHIGGKQLYVTSGHYAKYGKDSFQPIHTPQEGEEFLLKPMNCPHHCEIFKSFPRSYKDL 354 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 PLRF +R E + G+ R F + + R + E +++ I Sbjct: 355 PLRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCRPDQLKDEFLKVMDIIFIIF 411 Query: 311 KRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 K LD + D E W ++ E Sbjct: 412 KALDFENFEAQISLRDKVNRDKYIGSEENWEKAESAIIE 450 >gi|299783724|gb|ADJ41722.1| Threonyl-tRNA synthase [Lactobacillus fermentum CECT 5716] Length = 601 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 106/350 (30%), Gaps = 43/350 (12%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + + ++ + L+ + L E+++ S EG+ + LK Sbjct: 66 NQQVSADELEGLERAVKKL--AKENLKIELVKVSVDDAVKAVEGDQFSSELLKE------ 117 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI------ 135 E + + I + L + ++ S Sbjct: 118 ----NAEDGQVSLYKMGDATILAQAPIMLYANLVKNVKLLSVAGAYWKGMSSNPMLQRIY 173 Query: 136 ---HLSREHFEIGEALGLMDFDRATKLSGA-------------RFSVLTGHLAHLERALG 179 +E E +R ++ G + + R + Sbjct: 174 GTVFFKKEDLEADLKARQEARERDHRVIGNQLDLFFVDPKVGAGLPYWMPKGSTIRRTIE 233 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-----RWLIPTSEV 234 +++ID + GY V P+L+ A +G + +DMF D L P + Sbjct: 234 RYVIDKEVGD-GYEHVYTPVLMNLNAYKTSGHWDHYREDMFPPMDMGDGELLELRPMNCP 292 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 S +Y H I + LPLR L R E A G+ R + + + + Sbjct: 293 SHIQIYKHHIRSYRELPLRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVALDQ 349 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E ++L ++ K +++ L D + + E+W Q Sbjct: 350 IQDEFAKILKLIMDVYKDFNINDYTFRLSYRDPKNTEKYFANDEMWERSQ 399 >gi|296422769|ref|XP_002840931.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637158|emb|CAZ85122.1| unnamed protein product [Tuber melanosporum] Length = 459 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 61/185 (32%), Gaps = 11/185 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + H + + L F+ +T +GY EV P + + +G + + M Sbjct: 72 VSPGSPLFLPHGSRIFNKLISFIRSQYT-LYGYEEVITPTIYKKSLWETSGHWENYNEHM 130 Query: 220 FCTT----DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 F G + L ++ + + LP+R+ +P R+E + G+ Sbjct: 131 FKVEAGEEFGLKPMNCPGHCLLFKHAAGKLSLRDLPVRYADFSPLHRNENSGSLS---GL 187 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 R +F + + R E L + + K L + L T Sbjct: 188 TRVRRFHQDDAHIFCRPSQISQEISSTLRFIQTVYKVFHLPPYKLRLST---RPKEGYMG 244 Query: 336 DLEVW 340 LE W Sbjct: 245 SLEEW 249 >gi|290980243|ref|XP_002672842.1| predicted protein [Naegleria gruberi] gi|284086421|gb|EFC40098.1| predicted protein [Naegleria gruberi] Length = 720 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 16/169 (9%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDM-------FCTTDGRWLIPTSEVSLTNLYS 241 + GY EV P + + E +G + DDM + + P + + ++ Sbjct: 358 KRGYDEVITPQMFQKELWETSGHWQHYKDDMFTVIEGTQHKEETIGIKPMNCPAHCLMFD 417 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 +I + LP+R +P R+E + G+ R +F + + + +E E Sbjct: 418 SKIRSYRELPVRLADFSPLHRNEPRGSLT---GLTRVRRFHQDDSHIFCTHDQVKSEIEN 474 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY-DLEVWLAGQNLYRE 349 L + + + +L K D+E+W + +E Sbjct: 475 CLQFVKFVYSEI-----FGFNLRFNLSTRPEKFVGDIEMWDKAEQSLKE 518 >gi|301096055|ref|XP_002897126.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262107445|gb|EEY65497.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 770 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 14/114 (12%) Query: 9 QNPEHLDIA-LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 +NPE + L KR+ E + I + N+ L K+ + ++A+ + Q+ + + Sbjct: 335 ENPELVRANELAKRNTELN-DDISKMSSGNKRLRKERDALQAQLDDLDKQLAKVEQKDKE 393 Query: 68 SL------------VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 K + S LK++ LE E ++ K+ + + Sbjct: 394 EDRVPEEDIFGIEPTAPPKEQLSALKKKRRGLEDELNKEQRKANKVQKEMEQLT 447 >gi|259500519|ref|ZP_05743421.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335] gi|302191209|ref|ZP_07267463.1| threonyl-tRNA synthetase [Lactobacillus iners AB-1] gi|309807138|ref|ZP_07701115.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|309810241|ref|ZP_07704086.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|259167903|gb|EEW52398.1| threonine-tRNA ligase [Lactobacillus iners DSM 13335] gi|308166489|gb|EFO68691.1| threonine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|308169513|gb|EFO71561.1| threonine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] Length = 643 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 113/336 (33%), Gaps = 21/336 (6%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE-Q 83 ++ + L+++ + ++K E I S + + + ++ LK E + + Sbjct: 113 IKASELPDLEKEMQKIVKNGEKI--EYKIVSKSELLDLFKDDPYKLELLKEEADEVAVYK 170 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 L + + + ++ +L R G + + Sbjct: 171 LEDFVDFGFNALLLNTGKLKHFKLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQ 230 Query: 144 IGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 E + D + GA A + R + +++ID ++ GY Sbjct: 231 RREDIKERDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVAD-GYQH 289 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKS 249 V P+L+ +A +G + +DMF D L P + S +Y+H I + Sbjct: 290 VYTPVLMNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRE 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R L R E A G+ R + + + + +E ++L E+ Sbjct: 350 LPIRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEV 406 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + D+ L D + + E+W Q Sbjct: 407 YRDFDITDYYFRLSYRDPKNTDKYFANDEMWERSQK 442 >gi|160915037|ref|ZP_02077250.1| hypothetical protein EUBDOL_01045 [Eubacterium dolichum DSM 3991] gi|158432836|gb|EDP11125.1| hypothetical protein EUBDOL_01045 [Eubacterium dolichum DSM 3991] Length = 461 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 14/176 (7%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 173 TAQGMFVNFKNVQRTMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + L L + H R +L F + T D+E Q + Sbjct: 229 EPGTDLDWYHYYKEFCMKFLTDLGIQREHLRFRDHTPEELAFYSKGTCDIEYNFHSQIGW 288 Query: 348 REISSCSTCGNF------QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 E+ + ++ ++ + + Y DP + + + S V V R L+A++ Sbjct: 289 GELWGIADRTDYDLKQHMETSKKSLEYLDPTTNEKYIPYCIEPS-VGVERMLLAVM 343 >gi|154482657|ref|ZP_02025105.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC 27560] gi|149736433|gb|EDM52319.1| hypothetical protein EUBVEN_00330 [Eubacterium ventriosum ATCC 27560] Length = 667 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 64/179 (35%), Gaps = 9/179 (5%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + M+ + G +L + + L +++ DL +E GY PL+ + Sbjct: 254 DHNKLGREMELFTTVDVIGQGLPLLMPKGQRMIQKLQRWIEDLEDNEWGYVRTKTPLMAK 313 Query: 203 DEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTNL-YSHEIIESKSLPLRFTT 256 + +G + D MF + + Y + LP R+ Sbjct: 314 SDLYKISGHWDHYKDGMFVLGDEEKDKEVFALRPMTCPFQYYVYKASQKSYRDLPCRYGE 373 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + FR+E + G+ R QF E I R + E + ++ A+ L+ L L Sbjct: 374 TSTLFRNEDSG---EMHGLTRVRQFTISEGHLIVRPDQMVEEFKNCIALAQYCLQTLGL 429 >gi|313674626|ref|YP_004052622.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Marivirga tractuosa DSM 4126] gi|312941324|gb|ADR20514.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Marivirga tractuosa DSM 4126] Length = 654 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 90/348 (25%), Gaps = 39/348 (11%) Query: 38 RILI-KKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEV 94 + L +++E I + + Q + + + + K +L + Sbjct: 114 KELQGEELEKIEQKMLELARQKNEYKRSEISKKEATEYYQKKGDEYKLELIEGLNDGEIT 173 Query: 95 CSSLKKLISCIPNVPLEEV-PIGTSANENILIRSVGKKPSAIHLSREH------------ 141 + I NI L+R + Sbjct: 174 FYQQGNFTDLCRGPHIPHTGYIKAVKLLNIAGAYWRGDEKRKQLTRIYGITFPKQKELKE 233 Query: 142 ----FEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG-----QFMIDLHTSEHGY 192 E + + +L V G L + + + + GY Sbjct: 234 YLELLEEAKKRDHRKLGKEMELFAFSEKVGLGLPLWLPKGTMLRDRLENFLKKAQVKAGY 293 Query: 193 TEVSAPLLVRDEAMYGTGQIPKF-----------ADDMFCTTDGRWLIPTSEVSLTNLYS 241 V P + E +G K+ +DD + + L P + +Y Sbjct: 294 QPVITPHIGNKELYITSGHYEKYGKDSFRPIAAPSDDDSKSDEEYLLKPMNCPHHCEIYK 353 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + K LPLR +R E + G+ R F + + R + E + Sbjct: 354 TKPRSYKDLPLRLAEFGTVYRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKEEFIK 410 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 ++ + L V + D EVW + E Sbjct: 411 VIDLVLFVFNSLGFEDFVTQVSLRDPDNREKYIGGDEVWDKAEKSIIE 458 >gi|307069528|ref|YP_003878005.1| putative threonyl-tRNA synthetase [Candidatus Zinderia insecticola CARI] gi|306482788|gb|ADM89659.1| putative threonyl-tRNA synthetase [Candidatus Zinderia insecticola CARI] Length = 467 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 63/153 (41%), Gaps = 6/153 (3%) Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--CTT 223 + + + + +++ + ++ Y E+ P+++RD T + +MF T Sbjct: 95 FWNKNGYIIWKNINKYIRNNIYIKYNYKEIKTPIILRDYFWKKTKHWNYYKKNMFLLKTK 154 Query: 224 DGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 + ++ + +Y+++ I K LPL++ + FR+E G+LR F Sbjct: 155 NKKYALKPMNCPGHIQIYNYKKISYKKLPLKYGEIGECFRNE---YTGSLHGILRLKNFN 211 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + ++ E + + +++ K + Sbjct: 212 QDDGHIFCKKNQILLELIKFNNICKKVYKNFNF 244 >gi|259502210|ref|ZP_05745112.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041] gi|259169828|gb|EEW54323.1| threonine-tRNA ligase [Lactobacillus antri DSM 16041] Length = 600 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 102/349 (29%), Gaps = 33/349 (9%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNS---NSAQIGQAIAEG 65 L AL + + + + D ++D A +S I +A +G Sbjct: 72 DELSALQDALLAKAKDAKV-EFVEAD---------LDDALAEVKDDPYSSELIKEAAKDG 121 Query: 66 NLSLVDALKNETSTLKE----QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 ++ + +K + + + + Sbjct: 122 KVA-----MYQVGDVKAVADGDIMVYGDAIKHLKLLSVAGAYWKGMSSNPMLQRVYGTVF 176 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + +D GA A + R + ++ Sbjct: 177 FSKDALDEDMKKRQEAREHDHRVIG--NQLDLFFVDPKVGAGLPYWMPKGATIRRTIERY 234 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSL 236 +ID ++ GY V P+L+ +A +G + DDMF D + P + S Sbjct: 235 IIDREVAD-GYEHVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLEIRPMNCPSH 293 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +Y H I + LP+R L R E A G+ R + + + + Sbjct: 294 IQIYKHHIRSYRDLPMRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVAVDQIR 350 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 E ++L+ ++ K D+ L D + E+W Q Sbjct: 351 DEFAKILNLIMDVYKDFDITDYSFRLSLRDPKNKEKYYGNDEMWDESQK 399 >gi|295698321|ref|YP_003602976.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] gi|291157332|gb|ADD79777.1| threonyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] Length = 414 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 71/195 (36%), Gaps = 11/195 (5%) Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 + ++H IG L L FD+ + SV + + I L E+ Y Sbjct: 10 NHTEKEQDHRSIGRQLELFYFDQ-----NSPGSVFWNPNGLIIFQELKRYIRLKLKEYQY 64 Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKS 249 EV P ++ TG + + MF + L P + ++ +I + Sbjct: 65 QEVKTPEILHKSLWKKTGHLQNYEKYMFKVSSESRKYCLKPMNCPGHIKIFQQKIRSYRD 124 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LPLR R+E + G++R +F + + +E F E ++ + +E+ Sbjct: 125 LPLRIAEFGNCHRNELSGSLH---GLMRVREFTQDDAHIFCTKEQVFEEIKKCIGMVQEV 181 Query: 310 LKRLDLHYRVVSLCT 324 K + L T Sbjct: 182 YKTFGFKKISIRLAT 196 >gi|195125579|ref|XP_002007255.1| GI12837 [Drosophila mojavensis] gi|193918864|gb|EDW17731.1| GI12837 [Drosophila mojavensis] Length = 460 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 108/305 (35%), Gaps = 59/305 (19%) Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K + + + E G ++S P+L + TG++ Sbjct: 40 KSGSNGTYQIMPIAQRALDKCINL-VQRNMQEAGGQKISLPVLTPTQLWKKTGRLDGDIS 98 Query: 218 DMFCTTDGRW----LIPTSEVSLTNLYSHE-IIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + + D + PT E ++T + + I + LPL + P FR E S Sbjct: 99 EFYMVRDRSGKQFLMSPTHEEAITAMLATTAPISYRQLPLLLYQIGPKFRDELKSRF--- 155 Query: 273 RGMLRQHQFWKCELVSIT-REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 G++R +F ++ + +E + + + E ++L++ + V TG +G S Sbjct: 156 -GLMRAKEFLMKDMYTFDVSKEKAELTYATVSEAYERFFRQLEVPFVKVEAATGIMGGSL 214 Query: 332 CKTYDLEVWLAGQNLYREISSC--------------STCGNFQSRRMNSRYRDPNSKSLK 377 Y + G++ SSC STC N QS ++N R R ++ Sbjct: 215 SHEY-HYISPVGEDTLLNCSSCGYAGNAEVFGEDATSTCPNCQSTQLN-RVRG-----VE 267 Query: 378 FTHT---------------LNGS-----------GVAVGRCLIAILENYLNADGSVTIPT 411 HT LN S G+ + R + A LE + PT Sbjct: 268 VAHTFLLGDKYSKPLGATYLNTSGKPETLVMGCYGIGITRIIAAALEVLSTEH-ELRWPT 326 Query: 412 VLRPY 416 +L PY Sbjct: 327 LLAPY 331 >gi|307564422|ref|ZP_07626963.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A] gi|307346782|gb|EFN92078.1| threonine--tRNA ligase [Prevotella amnii CRIS 21A-A] Length = 650 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 88/332 (26%), Gaps = 34/332 (10%) Query: 46 DIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 I A+ + + I + K + K + + E+ + + + + Sbjct: 121 KIEAKMMELAKKNSPIIRREVSKAEAIKEFKADGQEYKVEHIEKDLEDGTISTYSQGNFT 180 Query: 104 CIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 + P A L R G + E+ + E Sbjct: 181 DLCRGPHLVSTGLIKAVKLTSVAGAFWRGDAKNAQLTRIYGITFPKKKMLDEYLLMLEEA 240 Query: 149 GLMDFDRATKLSGARFS---VLTGHLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLL 200 D + K V G L + Q M+ + Y EV P + Sbjct: 241 KKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDMLRKLLKPYNYQEVITPGI 300 Query: 201 VRDEAMYGTGQIPKFADD-----MFCTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRF 254 +G + D D +++ +Y+++ K LPLR Sbjct: 301 GSKNLYITSGHYAHYGKDAFQPIQTPEEDEEYMLKPMNCPHHCEVYAYKPRSYKDLPLRI 360 Query: 255 TTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLD 314 FR E + G+ R F + + R + E E + ++ K Sbjct: 361 AEFGTVFRYEKSG---ELHGLTRVRNFTQDDAHIFVRPDQVKAEFENNIDIILKVFKTFG 417 Query: 315 LHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + D D EVW + Sbjct: 418 FENYEAQISLRDPEDKDKYIGDDEVWNESEQA 449 >gi|167626332|ref|YP_001676832.1| threonyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189083609|sp|B0TY89|SYT_FRAP2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|167596333|gb|ABZ86331.1| threonyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 635 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 88/280 (31%), Gaps = 20/280 (7%) Query: 52 NSNSAQ--IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL---KKLISCIP 106 S + I A+G VD +++ + + ++ I Sbjct: 137 KVVSKEDAIAFFKAQGENYKVDIIESIPADQQIKIYTQGDFSDLCRGPHVPSTAAIKAFK 196 Query: 107 NVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS- 165 L +N +L R G + ++ + E D + K Sbjct: 197 LTKLAGAYWRGDSNNEMLTRIYGTCWATKEDLDQYLHMLEEAEKRDHRKIGKALDLFHFQ 256 Query: 166 -------VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 + + R + +M + ++G E+ PL+ +G K+A++ Sbjct: 257 EDSPGIAFWHDNGVRIWREVEDYMRASN-KKYGCGEIRTPLIADFSLWEKSGHASKYAEN 315 Query: 219 MFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 MF T + P + + +Y+ ++ + LP+R R+E + G+ Sbjct: 316 MFATKSENRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLH---GL 372 Query: 276 LRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +R F + + E E M+ E+ K Sbjct: 373 MRVRSFTQDDGHIFCAPEQVEEEVILMVKQCFEVYKDFGF 412 >gi|163782015|ref|ZP_02177014.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159882547|gb|EDP76052.1| threonyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 641 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 90/304 (29%), Gaps = 20/304 (6%) Query: 28 EYILSLDEKNRILIKK-IEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 E + ++EK R +IK+ +R R+ + + ++ + E Q Sbjct: 119 EDLPKIEEKMREIIKRDYPILRKELERDEAIKLFNDLKEKYKIDIIQRISPEDVISVYQQ 178 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 + A++ L R G + R+ Sbjct: 179 GDFIDLCRGPHLPSTGKAGSFKLTSISGAYWLGKADQPQLTRIYGMAFWSDKELRQRLRF 238 Query: 145 GEALGLMD---------FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 E D F + GA + + + L + + H + GY V Sbjct: 239 YEEAKKRDHRKLGRDLEFFMIDENVGAGLVLWLPRGSIYRKVLEDYWKEEHI-KRGYQFV 297 Query: 196 SAPLLVRDEAMYGTGQI----PKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLP 251 P + + + +G + P M + ++ P + +Y ++ K LP Sbjct: 298 YTPHVGKSKLWEISGHLECYKPNMFPAMEMEGEEYYVKPMNCPFHIAIYKSKVRSYKDLP 357 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 ++ L +R E G+LR F + + I E L A +LK Sbjct: 358 VKLAELGTVYRYEMSGVLH---GLLRVRGFTQDDAHIICTPEQVDEVIRDTLDLALSMLK 414 Query: 312 RLDL 315 Sbjct: 415 DFGF 418 >gi|327270906|ref|XP_003220229.1| PREDICTED: probable prolyl-tRNA synthetase, mitochondrial-like [Anolis carolinensis] Length = 472 Score = 48.2 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 105/299 (35%), Gaps = 53/299 (17%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + + L + ID G +++ P L + +G+ ++ Sbjct: 80 ASPGCYHYMPYAVRAMEKLIKV-IDQEMQAIGGQKMNMPTLCSAKLWRDSGRWELMGKEL 138 Query: 220 ----FCTTDGRWLIPTSEVSLTNLYSHE-IIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 L PT E ++T+L + + + K LPL + FR E + G Sbjct: 139 LRMKDRHGQEYCLGPTHEEAITDLIASQGCLSYKQLPLLLYQVTRKFRDEP----KPRFG 194 Query: 275 MLRQHQFWKCELVSIT-REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 +LR +F+ ++ + +E + +E + + I L L + V TG +G + Sbjct: 195 LLRGREFYMKDMYTFDASKEAALQTYECVSNAYSNIFNNLGLQFIKVQAATGSIGGTMSH 254 Query: 334 TYDLEVWLAGQNLYREISSCSTCGNFQSR--RMN--------SRYRDPNSKSLKFTHTL- 382 E L + ++ C+ C +F + MN + + SK ++ HT Sbjct: 255 ----EFQLPAEVGEDQLMMCANC-DFSANVETMNSNEMGCPVCKGKLIESKGIEVGHTFF 309 Query: 383 ---------NGS----------------GVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 N + G+ V R L A +E D ++ P ++ PY Sbjct: 310 LGTKYSSVFNATVHTAQNKPVSAEMGCYGLGVSRILAASIEVLSTED-AIRWPDLIAPY 367 >gi|297571384|ref|YP_003697158.1| threonyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296931731|gb|ADH92539.1| threonyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 670 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 74/231 (32%), Gaps = 23/231 (9%) Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 E + + +D G+ +V + + + H + Y+ V+ P Sbjct: 257 ERRDHRKLGSELDLFSFPDEIGSGLAVFHPKGGIIRMEMENYSRQKHIEGN-YSFVNTPH 315 Query: 200 LVRDEAMYGTGQIPKFADDMFCTTDG----------------RWLIPTSEVSLTNLYSHE 243 + + +G + +AD M+ +L P + +Y Sbjct: 316 ITKGNLFEVSGHLDFYADGMYPPMHMDEERDADGNITKQGADYYLKPMNCPMHNLVYKSR 375 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + LPLR +R+EA G+ R F + + + E R+L Sbjct: 376 GRSYRELPLRLFEFGTVYRNEASG---VVHGLTRARGFTQDDAHIYCTRDQMKDELTRLL 432 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 + ++LK L + L T D +VW +E++ S Sbjct: 433 TFVLDLLKDYGLDDFYLELSTK---NPKKFVGDDDVWEESTRTLQEVAEAS 480 >gi|293376470|ref|ZP_06622699.1| threonine--tRNA ligase [Turicibacter sanguinis PC909] gi|325842051|ref|ZP_08167588.1| threonine--tRNA ligase [Turicibacter sp. HGF1] gi|292644892|gb|EFF62973.1| threonine--tRNA ligase [Turicibacter sanguinis PC909] gi|325489773|gb|EGC92129.1| threonine--tRNA ligase [Turicibacter sp. HGF1] Length = 645 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 71/196 (36%), Gaps = 8/196 (4%) Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 L G + + + + + +++ +L ++GY V+ P++ + +G + +D Sbjct: 256 LVGQGLPIWLPNGMKVRQQIERYITELE-EDYGYQHVATPVMGSVDLYRTSGHWAHYQED 314 Query: 219 MFCTTDG----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 MF + L P S +Y ++ + LP+R+ R EA A G Sbjct: 315 MFVPMEMDNEELVLRPMSCPHHMMVYKTKLRSYRDLPIRYAEQVIQHRFEASGALT---G 371 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + R + E R L ++K + L D Sbjct: 372 LERVRAMTLTDSHLFVRPDQIKEEFSRCLELIHRVIKDFGVEINYYRLSLRDPENKEKYF 431 Query: 335 YDLEVWLAGQNLYREI 350 D ++W +++ RE Sbjct: 432 DDDQMWENAESMLRET 447 >gi|289549510|ref|YP_003470414.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|289179042|gb|ADC86287.1| Threonyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] Length = 638 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 9/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + + G F + G + + + ++ Y EV PL++ + +G Sbjct: 254 FMFSEEAPGMPFYLSNGQFVRNQ---MENFLREIQLKNDYDEVRTPLMMNQKLWEESGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++M+ T + L P + ++ +E+ K LPLR R E A Sbjct: 311 DHYHENMYFTKVDENDYALKPMNCPGHMLIFKNELRSYKDLPLRMAEFGQVHRHEFSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 G+LR F + + + +E E +L + I Y Sbjct: 371 ---NGLLRVRTFCQDDAHIFIMKSQIKSEVEDILKLIDYIYSVFGFTY 415 >gi|315659856|ref|ZP_07912715.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|315495144|gb|EFU83480.1| threonine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 638 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 9/168 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 F + + G F + G + + + ++ Y EV PL++ + +G Sbjct: 254 FMFSEEAPGMPFYLSNGQFVRNQ---MENFLREIQLKNDYDEVRTPLMMNQKLWEESGHW 310 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + ++M+ T + L P + ++ +E+ K LPLR R E A Sbjct: 311 DHYHENMYFTKVDENDYALKPMNCPGHMLIFKNELRSYKDLPLRMAEFGQVHRHEFSGAL 370 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 G+LR F + + + +E E +L + I Y Sbjct: 371 ---NGLLRVRTFCQDDAHIFIMKSQIKSEVEDILKLIDYIYSVFGFTY 415 >gi|289434839|ref|YP_003464711.1| hypothetical protein lse_1474 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171083|emb|CBH27625.1| thrS [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 640 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 114/344 (33%), Gaps = 26/344 (7%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDI-RA----RRNSNSAQ--IGQAIAEGNLSLVDALKN 75 + +E ++S DE + K+++ I R R S + I + A G+ ++ ++ Sbjct: 103 YDIDTEAVIS-DESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDEYKLELIEA 161 Query: 76 ETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + + + I + + +N +L R G Sbjct: 162 IPADETVTIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYGTAF 221 Query: 133 SAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTS 188 + +E ++ + D + K L V G L + A + +I+ + Sbjct: 222 FDKNGLKEFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIV 281 Query: 189 EHG----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLY 240 + Y V P++ E +G + +DMF T L P + +Y Sbjct: 282 DKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIY 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++I + LP+R L R E A G+ R + R + E + Sbjct: 342 KNDIHSYRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFK 398 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 R++ E+ K D+ L D + D +W Q Sbjct: 399 RVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWDKAQ 442 >gi|167771272|ref|ZP_02443325.1| hypothetical protein ANACOL_02630 [Anaerotruncus colihominis DSM 17241] gi|167666523|gb|EDS10653.1| hypothetical protein ANACOL_02630 [Anaerotruncus colihominis DSM 17241] Length = 478 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 95/283 (33%), Gaps = 20/283 (7%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 + ++ S R ++ Q ++D E G+ V P Sbjct: 14 MDEDFAKWYTDIVKKADLADYSSVRGCMIVRPYGCAIWENIQHILDTRFKELGHENVQMP 73 Query: 199 LLVRDEAMYGTGQIPK-FADDMFCTTD--------GRWLIPTSEVSLTNLYSHEIIESKS 249 + + + + + FA ++ T + PTSE Y+ I + Sbjct: 74 MFIPEGLLQKEKDHVEGFAPEVAWVTHGGEEKLTERLCVRPTSETLFCEHYAKIINSYRD 133 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI--TREEDSFTEHERMLSCAE 307 LP + R E + TR LR +FW E ++ T++E + AE Sbjct: 134 LPKLYNQWCSVVRWE-----KTTRPFLRTCEFWWQEGHTMHETQQEAMEETERMLGVYAE 188 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 L + + A TY +E + + + G+ SR Sbjct: 189 FCENSLAIPVTKGRKTKKEQFAGAEATYTIEA-MMHDGKALQSGTSHYFGDGFSRAFGIT 247 Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIP 410 ++ ++K ++ H G++ R + AI+ + + DG V P Sbjct: 248 FQGRDNK-PQYPHQ-TSWGMST-RIIGAIIMTHGDNDGLVLPP 287 >gi|291060195|gb|ADD72930.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Chicago] Length = 582 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 47/158 (29%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 V Q + E GY EV P ++ +G K+ +M+ Sbjct: 199 ENPGQVFWHPEGWTLYVAIQQYLRRVMHEDGYAEVHTPFVMPQSLWERSGHWDKYRANMY 258 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ ++ + + LPLR + R+E + G++R Sbjct: 259 LTEGEKRSFALKPMNCPGHVEIFKQKTRSYRDLPLRLSEFGSCTRNEPSGSLH---GVMR 315 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E R + Sbjct: 316 VRGFVQDDAHIFCTEAQIASEVTRFCRLLARVYADFGF 353 >gi|94971761|ref|YP_593809.1| threonyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] gi|94553811|gb|ABF43735.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] Length = 659 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 65/206 (31%), Gaps = 8/206 (3%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D +L+G + + + +M + + + GY+ V P + R + Sbjct: 262 KQLDLFSIQELAGPGLIFWHPKGGIIRKEMEDWMREEYL-KRGYSLVVTPHVARTDLWKI 320 Query: 209 TGQIPKFADD----MFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 +G + + M L P + +Y ++ + LP+R + +R E Sbjct: 321 SGHTGYYKQNFFTPMELDDAEYMLKPMNCPGHVLIYRDQLRSYRDLPMRLGEMGTVYRYE 380 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G+LR F + + E + A +L + V L Sbjct: 381 RSG---VMHGLLRVRGFTQDDAHIFCTPSQIEDEISGCIDFAISVLHTYGFNEFKVELSE 437 Query: 325 GDLGFSACKTYDLEVWLAGQNLYREI 350 D E W Q +++ Sbjct: 438 WDPNDRKSFIGTDEQWNLAQGSLKKV 463 >gi|15639823|ref|NP_219273.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Nichols] gi|189026061|ref|YP_001933833.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|6094415|sp|O83809|SYT_TREPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|238689347|sp|B2S475|SYT_TREPS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|3323150|gb|AAC65804.1| threonyl-tRNA synthetase (thrS) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018636|gb|ACD71254.1| threonyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] Length = 592 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 47/158 (29%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 V Q + E GY EV P ++ +G K+ +M+ Sbjct: 209 ENPGQVFWHPEGWTLYVAIQQYLRRVMHEDGYAEVHTPFVMPQSLWERSGHWDKYRANMY 268 Query: 221 CTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + ++ ++ + + LPLR + R+E + G++R Sbjct: 269 LTEGEKRSFALKPMNCPGHVEIFKQKTRSYRDLPLRLSEFGSCTRNEPSGSLH---GVMR 325 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + E +E R + Sbjct: 326 VRGFVQDDAHIFCTEAQIASEVTRFCRLLARVYADFGF 363 >gi|325569916|ref|ZP_08145910.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325157039|gb|EGC69207.1| threonine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 646 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 108/339 (31%), Gaps = 25/339 (7%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 +E + +++ + +IK E++ R + + A+ + V+ L E + Sbjct: 113 PVTAEDLPAIEAEMMKIIK--ENLPIERRVLTKEEALALFAEDPYKVE-LITELPDDETI 169 Query: 84 LPILEKEEHEVCS----SLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 + E ++C I + + S++ ++ R G + Sbjct: 170 TAYQQGEFVDLCRGPHVPSTGRIQVYKLLSVAGAYWRGSSDNQMMQRVYGTAFFDKKDLK 229 Query: 140 EHFEIGEALGLMDFDRATKL---------SGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 E + E D + K GA A + R + ++++D S Sbjct: 230 EFIRLREEAKERDHRKLGKELELFMLSPEVGAGLPFWLPKGATIRRTIERYIVDKEVSL- 288 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH-----EII 245 GY V P++ + +G + +DMF D + + +I Sbjct: 289 GYQHVYTPIMANVDLYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIH 348 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LP+R L R E A G+ R + + + R + E +R L Sbjct: 349 SYRELPIRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVRPDQIKEEFKRTLDL 405 Query: 306 AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + + ++ L D D +W Q Sbjct: 406 MVGVYEDFNITDYRFRLSYRDPQNKDKYFDDDAMWENAQ 444 >gi|327398462|ref|YP_004339331.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181091|gb|AEA33272.1| threonyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 620 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 7/175 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D G + A L + +F H + GY V P ++R + Sbjct: 233 KQLDLFSINDEVGPGLIIWHPKGAMLRYLIEEFERKEHL-KRGYEFVKGPEILRTQLWKR 291 Query: 209 TGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 +G + ++M+ T + P + + +Y + + LP R+ L R E Sbjct: 292 SGHFDHYRENMYFTEIDDQSFGIKPMNCLGHIQVYKSKKRSYRELPKRYFELGVVHRHEK 351 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 G+LR +F + + R + E +L+ ++++ Y + Sbjct: 352 SGVLH---GLLRVREFTQDDAHIFCRPDQLNDEIIGVLNFVQDVMDIFGFEYELE 403 >gi|124516423|gb|EAY57931.1| Threonyl-tRNA synthetase [Leptospirillum rubarum] Length = 617 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 50/140 (35%), Gaps = 7/140 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY----SHEI 244 HGY V P + R + +G + D MF + + + + Sbjct: 259 RHGYRYVYTPHIARLDLWMQSGHWDYYQDSMFRPMETEGTAYELKPMNCPFHILIFRESV 318 Query: 245 IESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 + LP+R + L +R E G++R F + + ED E +L+ Sbjct: 319 QSYRDLPIRLSELGTVYRYERSG---TLHGLMRVRGFTQDDAHIFYPPEDLAGEIRNVLA 375 Query: 305 CAEEILKRLDLHYRVVSLCT 324 ++++ R R V L T Sbjct: 376 LVDQMIGRFGFTDRTVYLST 395 >gi|291571004|dbj|BAI93276.1| threonyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 604 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 8/165 (4%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR----WLIPTSEVSL-TNLYSHE 243 GY V P L R +G K+ +D+F +++ +Y Sbjct: 247 RRGYQPVVTPHLGRVNLFKTSGHWQKYREDLFPMMGESEDEGFVLKAMNCPFHVQIYKSS 306 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP+R +R E + G+ R F + + E E +++ Sbjct: 307 LRSYRELPIRLAEFGTVYRYEQSG---ELGGLTRVRGFTQDDAHLFVTPEQLDDEFLKVV 363 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + +LK+L L + + S + W +N R Sbjct: 364 DLIQSVLKKLKLDQSFKARLSFRDPNSDKYIGSDQAWEKAENAIR 408 >gi|256819829|ref|YP_003141108.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] gi|256581412|gb|ACU92547.1| threonyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] Length = 647 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 48/164 (29%), Gaps = 9/164 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSH 242 + GY +V P + +G K+ D F + L P + +Y+ Sbjct: 286 QAGYEQVVTPHIGHKNLYVTSGHWDKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNS 345 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LP RF +R E + G+ R F + + E E + + Sbjct: 346 HPWSYKDLPKRFAEFGTVYRYEQSG---ELHGLTRVRCFTQDDAHIFCTPEQLDDEFKHV 402 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + L + D E W +N Sbjct: 403 IDLVLYVFGSLGFDNFTAQVSLRDPENPTKYIGSDENWAKAENA 446 >gi|312217649|emb|CBX97596.1| hypothetical protein [Leptosphaeria maculans] Length = 829 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 56/156 (35%), Gaps = 25/156 (16%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL-- 236 Q + + G+ EV P++ + +G +A+DMF + T+E+ Sbjct: 131 LQAFLRAQYPQFGFEEVITPIIYKKSLWEKSGHWQNYAEDMFSV---QGRGATAEIPQAE 187 Query: 237 -----------------TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 L+ +++ ++LP+R+ + R+E A G+ R Sbjct: 188 AEDNGEFGLKPMNCPGHCILFRDKVMSYRNLPVRYADFSALHRNEISGALT---GLTRVR 244 Query: 280 QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +F + + R + E E+ L + L Sbjct: 245 RFHQDDAHIFCRPDQILAEIEQTLKFVGMVYNTFGL 280 >gi|315225228|ref|ZP_07867045.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287] gi|314944911|gb|EFS96943.1| threonine--tRNA ligase [Capnocytophaga ochracea F0287] Length = 646 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 48/164 (29%), Gaps = 9/164 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSH 242 + GY +V P + +G K+ D F + L P + +Y+ Sbjct: 286 QAGYEQVVTPHIGHKNLYVTSGHWDKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNS 345 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LP RF +R E + G+ R F + + E E + + Sbjct: 346 HPWSYKDLPKRFAEFGTVYRYEQSG---ELHGLTRVRCFTQDDAHIFCTPEQLDDEFKHV 402 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + L + D E W +N Sbjct: 403 IDLVLYVFGSLGFDNFTAQVSLRDPENPTKYIGSDENWAKAENA 446 >gi|209526622|ref|ZP_03275147.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209492990|gb|EDZ93320.1| threonyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 604 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 8/165 (4%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR----WLIPTSEVSL-TNLYSHE 243 GY V P L R +G K+ +D+F +++ +Y Sbjct: 247 RRGYQPVVTPHLGRVNLFKTSGHWQKYREDLFPMMGESEDEGFVLKAMNCPFHVQIYKSS 306 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP+R +R E + G+ R F + + E E +++ Sbjct: 307 LRSYRELPIRLAEFGTVYRYEQSG---ELGGLTRVRGFTQDDAHLFVTPEQLDDEFLKVV 363 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + +LK+L L + + S + W +N R Sbjct: 364 DLIQSVLKKLKLDQSFKARLSFRDPNSDKYIGSDQAWEKAENAIR 408 >gi|108757584|ref|YP_630572.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622] gi|108461464|gb|ABF86649.1| threonyl-tRNA synthetase [Myxococcus xanthus DK 1622] Length = 400 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 48/166 (28%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + L + + GY EV P L +G Sbjct: 14 LDLFHLQEEAPGMVFWHPRGLVLYRLLEEHVRQRMRREGYQEVRTPQLYAQPLWERSGHW 73 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 F ++MF DG + VS L + LPLR R+E G A Sbjct: 74 DNFRENMFLVEDGARHLGVKPVSCPGHIELVQRMAPSYRDLPLRLGEFGLVHRAEPGGAL 133 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G+ R QF + + E E R ++ Sbjct: 134 H---GLFRLRQFTQDDGHIFCAEPQVVPEVVRFARSLKDFYAGFGF 176 >gi|254828206|ref|ZP_05232893.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258600595|gb|EEW13920.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] Length = 640 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 113/344 (32%), Gaps = 26/344 (7%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDI-RA----RRNSNSAQ--IGQAIAEGNLSLVDALKN 75 + +E ++S DE + K+++ I R R S + I + A G+ ++ ++ Sbjct: 103 YDIDTEAVIS-DESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEA 161 Query: 76 ETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + + I + + +N +L R G Sbjct: 162 IPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYGTAF 221 Query: 133 SAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTS 188 + +E ++ + D + K L V G L + A + +I+ + Sbjct: 222 FDKNGLKEFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIV 281 Query: 189 EHG----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLY 240 + Y V P++ E +G + +DMF T L P + +Y Sbjct: 282 DKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIY 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++I + LP+R L R E A G+ R + R + E + Sbjct: 342 KNDIHSYRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFK 398 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 R++ E+ K D+ L D + D +W Q Sbjct: 399 RVVELILEVYKDFDITDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 442 >gi|167377546|ref|XP_001734439.1| hypothetical protein [Entamoeba dispar SAW760] gi|165904054|gb|EDR29416.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 586 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 50/155 (32%), Gaps = 5/155 (3%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI--AEGNLSLVD 71 ++ +L ++ ++ S+ I +D + L + E ++ N QI Sbjct: 372 VEKSLLEKEIQESSQDIKEIDN-IKELQSENEQLQREINDMKKQIQNIKEEKRKRDEETS 430 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK 131 L E + +K Q+ L+++ ++ + N E + + +NE + V Sbjct: 431 RLIKENNEMKSQINELKQKLRDLKEKEENEKKDNENKKQENIELKEYSNEGQRLIQVKAM 490 Query: 132 --PSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 G +R K+ Sbjct: 491 GGIVEDQEIDSFISHEIKQGEEIDNRINKVIEENN 525 >gi|224499783|ref|ZP_03668132.1| threonyl-tRNA synthetase [Listeria monocytogenes Finland 1988] Length = 640 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 113/344 (32%), Gaps = 26/344 (7%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDI-RA----RRNSNSAQ--IGQAIAEGNLSLVDALKN 75 + +E ++S DE + K+++ I R R S + I + A G+ ++ ++ Sbjct: 103 YDIDTEAVIS-DESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEA 161 Query: 76 ETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + + I + + +N +L R G Sbjct: 162 IPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYGTAF 221 Query: 133 SAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTS 188 + +E ++ + D + K L V G L + A + +I+ + Sbjct: 222 FDKNGLKEFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIV 281 Query: 189 EHG----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLY 240 + Y V P++ E +G + +DMF T L P + +Y Sbjct: 282 DKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIY 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++I + LP+R L R E A G+ R + R + E + Sbjct: 342 KNDIHSYRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFK 398 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 R++ E+ K D+ L D + D +W Q Sbjct: 399 RVVELILEVYKDFDITDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 442 >gi|189461814|ref|ZP_03010599.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136] gi|189431408|gb|EDV00393.1| hypothetical protein BACCOP_02480 [Bacteroides coprocola DSM 17136] Length = 646 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 92/338 (27%), Gaps = 27/338 (7%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 ++++K L K E++ R S S + + S L++ + Sbjct: 120 AIEKKMAELASKKEEL--VRKSISKEDALKMFGERGETYK--CELISELEDGHITTYTQG 175 Query: 92 HEVCSSL------KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 + I + + + + R G + E+ + Sbjct: 176 AFTDLCRGPHLPSTAPVKAIKLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLALL 235 Query: 146 EALGLMDFDRATKLSGARFS---VLTGHLAHLERAL-----GQFMIDLHTSEHGYTEVSA 197 E D + K V G L + Q + + + Y EV Sbjct: 236 EEAKKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMC 295 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLP 251 P + +G K+ D F +L P + +Y + + LP Sbjct: 296 PPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCMIYKNTPRSYRDLP 355 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 LR R E + G+ R F + + R + E R++ + K Sbjct: 356 LRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFK 412 Query: 312 RLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + L + D E W + E Sbjct: 413 SMGLENFEAQISLRDKVNREKYIGSDENWEKAEQAIVE 450 >gi|16803599|ref|NP_465084.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|224501501|ref|ZP_03669808.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|22654119|sp|Q8Y6X2|SYT_LISMO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|16410988|emb|CAC99637.1| threonyl-tRNA synthetase [Listeria monocytogenes EGD-e] Length = 640 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 113/344 (32%), Gaps = 26/344 (7%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDI-RA----RRNSNSAQ--IGQAIAEGNLSLVDALKN 75 + +E ++S DE + K+++ I R R S + I + A G+ ++ ++ Sbjct: 103 YDIDTEAVIS-DESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEA 161 Query: 76 ETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + + I + + +N +L R G Sbjct: 162 IPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYGTAF 221 Query: 133 SAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTS 188 + +E ++ + D + K L V G L + A + +I+ + Sbjct: 222 FDKNGLKEFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIV 281 Query: 189 EHG----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLY 240 + Y V P++ E +G + +DMF T L P + +Y Sbjct: 282 DKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIY 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++I + LP+R L R E A G+ R + R + E + Sbjct: 342 KNDIHSYRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFK 398 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 R++ E+ K D+ L D + D +W Q Sbjct: 399 RVVELILEVYKDFDITDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 442 >gi|21672408|ref|NP_660475.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|22654285|sp|P46244|SYT_BUCAP RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|21623017|gb|AAM67686.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 642 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 6/163 (3%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 + + + + + + E+ Y EV PLL+ +G + Sbjct: 254 YHMQKESPGMIFWHNNGWIIFNELEIFVREKLKEYKYKEVKTPLLIDKSIWQKSGHWDNY 313 Query: 216 ADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 D +F T + P + +++ + + LP+R R+E+ + Sbjct: 314 QDAIFTTSSENREYCIKPMNCPGHVQIFNCGLKSYRDLPIRMAEFGSCHRNESSGSLH-- 371 Query: 273 RGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + +E E + ++ + Sbjct: 372 -GLMRIRNFTQDDAHIFCTQEQLRYEINNCIKMIYDLYSTFNF 413 >gi|123456829|ref|XP_001316147.1| viral A-type inclusion protein [Trichomonas vaginalis G3] gi|121898845|gb|EAY03924.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3] Length = 2010 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 D++ + N + + +++ L Q E ++ ++++ + +++E +RA N +QI + Sbjct: 694 DLKKEKDNFDSI--SIENEDLRSQVEVLIKVEDERNQMSEELEKLRANYNELQSQISKQN 751 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 E N ++ L E S L+E+L ++ E + Sbjct: 752 FENNKETIEKLIGEKSKLQEELESIKNELDSIQ 784 >gi|312870359|ref|ZP_07730484.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311094060|gb|EFQ52379.1| threonine--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 600 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 110/355 (30%), Gaps = 43/355 (12%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST-- 79 S+ DE+ +++ A +++ A+ A E +D E Sbjct: 57 GFHVDSDK----DEQ----QVSADELSALQDALLAKAKNAKVEFVEVDLDDALAEVKDDP 108 Query: 80 -----LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS- 133 +KE + ++V I + + + + P Sbjct: 109 YSSELIKEAAKDGKVAMYQVGDVKAVADDDILLYGDAIKHLKLLSVAGAYWKGMSSNPML 168 Query: 134 -----AIHLSREHFEIGEALGLMDFDRATKLSGA-------------RFSVLTGHLAHLE 175 + ++E + + ++ G A + Sbjct: 169 QRIYGTVFFNKEALDEDMKKRQEAREHDHRVIGNQLDLFFVDPKVGAGLPYWMPKGATIR 228 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIP 230 R + +++ID ++ GY V P+L+ +A +G + DDMF D + P Sbjct: 229 RTIERYIIDREVAD-GYEHVYTPVLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLEIRP 287 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + S +Y H I + LP+R L R E A G+ R + + + Sbjct: 288 MNCPSHIQIYKHHIRSYRDLPMRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFV 344 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + E ++L+ ++ K D+ L D + E+W Q Sbjct: 345 AVDQIRDEFAKILNLIMDVYKDFDITDYSFRLSLRDPKNKEKYYGNDEMWDESQK 399 >gi|284052870|ref|ZP_06383080.1| threonyl-tRNA synthetase [Arthrospira platensis str. Paraca] Length = 508 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 8/165 (4%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR----WLIPTSEVSL-TNLYSHE 243 GY V P L R +G K+ +D+F +++ +Y Sbjct: 247 RRGYQPVVTPHLGRVNLFKTSGHWQKYREDLFPMMGESEDEGFVLKAMNCPFHVQIYKSS 306 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + + LP+R +R E + G+ R F + + E E +++ Sbjct: 307 LRSYRELPIRLAEFGTVYRYEQSG---ELGGLTRVRGFTQDDAHLFVTPEQLDDEFLKVV 363 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + +LK+L L + + S + W +N R Sbjct: 364 DLIQSVLKKLKLDQSFKARLSFRDPNSDKYIGSDQAWEKAENAIR 408 >gi|162453609|ref|YP_001615976.1| hypothetical protein sce5333 [Sorangium cellulosum 'So ce 56'] gi|254806467|sp|A9FXA7|Y5333_SORC5 RecName: Full=UPF0365 protein sce5333 gi|161164191|emb|CAN95496.1| hypothetical protein sce5333 [Sorangium cellulosum 'So ce 56'] Length = 330 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 18/99 (18%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSN 54 D + + +NP+ + + K+ L+ + ILS+D I ++ ++ + Sbjct: 188 DYKHVLENPDTISKNVLKKGLDAGTAFEILSID------IADVDVGSNIGAKLQTEQAEA 241 Query: 55 SAQIGQAIAEGNLSLV----DALKNETSTLKEQLPILEK 89 Q+ QA AE +L +K +T ++ +L E Sbjct: 242 DKQVAQAKAESRRALAVAQEQEMKAKTQEMRAKLVEAES 280 >gi|46907789|ref|YP_014178.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47093096|ref|ZP_00230873.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|217964294|ref|YP_002349972.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|226224160|ref|YP_002758267.1| threonyl-tRNA synthetase [Listeria monocytogenes Clip81459] gi|254824382|ref|ZP_05229383.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254852182|ref|ZP_05241530.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|254931499|ref|ZP_05264858.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|255520160|ref|ZP_05387397.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|290893960|ref|ZP_06556936.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|300764775|ref|ZP_07074765.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|67461796|sp|Q71ZA9|SYT_LISMF RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|254783526|sp|B8DHI9|SYT_LISMH RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|259516560|sp|C1KVK6|SYT_LISMC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|46881058|gb|AAT04355.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|47018536|gb|EAL09292.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|217333564|gb|ACK39358.1| threonyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|225876622|emb|CAS05331.1| threonyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605487|gb|EEW18095.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|290556498|gb|EFD90036.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|293583051|gb|EFF95083.1| threonyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293593617|gb|EFG01378.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300514451|gb|EFK41508.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|307571140|emb|CAR84319.1| thrS [Listeria monocytogenes L99] gi|313608610|gb|EFR84472.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-208] gi|328465594|gb|EGF36823.1| threonyl-tRNA synthetase [Listeria monocytogenes 1816] gi|332312001|gb|EGJ25096.1| Threonyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 640 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 113/344 (32%), Gaps = 26/344 (7%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDI-RA----RRNSNSAQ--IGQAIAEGNLSLVDALKN 75 + +E ++S DE + K+++ I R R S + I + A G+ ++ ++ Sbjct: 103 YDIDTEAVIS-DESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEA 161 Query: 76 ETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + + I + + +N +L R G Sbjct: 162 IPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYGTAF 221 Query: 133 SAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTS 188 + +E ++ + D + K L V G L + A + +I+ + Sbjct: 222 FDKNGLKEFIQMQKEAKERDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVIERYIV 281 Query: 189 EHG----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLY 240 + Y V P++ E +G + +DMF T L P + +Y Sbjct: 282 DKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIY 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++I + LP+R L R E A G+ R + R + E + Sbjct: 342 KNDIHSYRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFK 398 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 R++ E+ K D+ L D + D +W Q Sbjct: 399 RVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 442 >gi|254831960|ref|ZP_05236615.1| threonyl-tRNA synthetase [Listeria monocytogenes 10403S] Length = 640 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 113/344 (32%), Gaps = 26/344 (7%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDI-RA----RRNSNSAQ--IGQAIAEGNLSLVDALKN 75 + +E ++S DE + K+++ I R R S + I + A G+ ++ ++ Sbjct: 103 YDIDTEAVIS-DESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEA 161 Query: 76 ETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + + I + + +N +L R G Sbjct: 162 IPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYGTAF 221 Query: 133 SAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTS 188 + +E ++ + D + K L V G L + A + +I+ + Sbjct: 222 FDKNGLKEFIQMQKEAKERDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVIERYIV 281 Query: 189 EHG----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLY 240 + Y V P++ E +G + +DMF T L P + +Y Sbjct: 282 DKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIY 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++I + LP+R L R E A G+ R + R + E + Sbjct: 342 KNDIHSYRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFK 398 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 R++ E+ K D+ L D + D +W Q Sbjct: 399 RVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 442 >gi|145608824|ref|XP_369830.2| hypothetical protein MGG_06345 [Magnaporthe oryzae 70-15] gi|145016254|gb|EDK00744.1| hypothetical protein MGG_06345 [Magnaporthe oryzae 70-15] Length = 617 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 9/138 (6%) Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 GR+ +E +T L H + K LP R + P FR E R +G+LR + Sbjct: 100 WAKSGRFEKAMTEEEITTLVKHTLSSYKQLPARLYQITPKFRDE----MRPRKGLLRGRE 155 Query: 281 FWKCELVSIT-REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEV 339 F +L + + +E++ + + I L L V +GD+G E Sbjct: 156 FMMKDLYTFDLSVNTALQTYEQVRAAYDRIFSELRLPVMVAEASSGDIG----GDLSHEY 211 Query: 340 WLAGQNLYREISSCSTCG 357 L ++ SCS C Sbjct: 212 HLPTSEGEDDVISCSRCH 229 >gi|326201675|ref|ZP_08191546.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325988275|gb|EGD49100.1| threonyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 645 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 65/181 (35%), Gaps = 10/181 (5%) Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---CTTDGRWLIPTSE 233 Q ++ GY P + + + +G + D MF ++ Sbjct: 275 QTLQRFVEDEEERRGYVLTKTPFMAKSDLYKLSGHWQHYKDGMFLLGDEEKDEEVMALRP 334 Query: 234 VSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 ++ +Y+ ++ + LP+R+ + FR+EA + G++R QF E + Sbjct: 335 MTCPFQFMIYNTKLHSYRDLPIRYGETSTLFRNEASG---EMHGLIRVRQFTISEGHLVC 391 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYRE 349 E E + ++ + +++ L + V + D + E W Q R Sbjct: 392 TPEQLEDEFKGVVDLIKFMMETLGIEEDVTYRFSKWDPKNKEKYIGNEEDWENVQGQMRT 451 Query: 350 I 350 I Sbjct: 452 I 452 >gi|194749304|ref|XP_001957079.1| GF10245 [Drosophila ananassae] gi|190624361|gb|EDV39885.1| GF10245 [Drosophila ananassae] Length = 458 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 96/259 (37%), Gaps = 55/259 (21%) Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW----LIPTSEVSLTNL 239 + G ++S P+L TG++ + + D + PT E ++T + Sbjct: 65 QSNMQLAGGQKISLPILTPSALWKKTGRLEGDISEFYMVRDRSGKQFLMSPTHEEAITAM 124 Query: 240 YSHE-IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT-REEDSFT 297 + I + LPLR + P FR E S G++R +F ++ S EE + Sbjct: 125 LATTSPISYRQLPLRLYQIGPKFRDELKSRF----GLMRAKEFLMKDMYSFDVSEETARE 180 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS--- 354 + + + + ++L++ + V+ TG +G S Y V G++ + +SC Sbjct: 181 SYSAVSEAYDRLFQQLEVPFVKVNAATGMMGGSLSHEY-HYVSTVGEDSLVQCTSCGFAG 239 Query: 355 ---------TCGNFQSRRMNSRYRDPNSKSLKFTHT---------------LNGS----- 385 C + QS +N + ++ HT LN S Sbjct: 240 NSEVLTTPENCPSCQSSNLN------EVRGVEIAHTFLLGDKYSTPLGATFLNTSGKPQS 293 Query: 386 ------GVAVGRCLIAILE 398 G+ + R + A LE Sbjct: 294 VIMGCYGIGITRVIAAALE 312 >gi|303318040|ref|XP_003069022.1| threonyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108703|gb|EER26877.1| threonyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320036822|gb|EFW18760.1| threonyl-tRNA synthetase [Coccidioides posadasii str. Silveira] Length = 598 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 20/172 (11%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 AH+ L F+ ++G+ EV P + + +G + DDM Sbjct: 148 FSPGSPYFHPDGAHIFNKLMSFLR-AQYKQYGFEEVITPTMYKKSLWEKSGHWHIYKDDM 206 Query: 220 FCTTDGRWLIPTSEVSL----------------TNLYSHEIIESKSLPLRFTTLAPSFRS 263 + T +V + L++ + +SLP+RF +P R+ Sbjct: 207 YEVRGRGATGQTVDVEIGEDEQYGLKPMNCPGHCVLFASKTRSYRSLPVRFAEFSPLHRN 266 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 E + G+ R +F + + R E E E L E +L L Sbjct: 267 EISGSLS---GLTRVRRFHQDDGHIFCRPEQIEREIELTLQFTESVLSTFGL 315 >gi|311747151|ref|ZP_07720936.1| threonine--tRNA ligase [Algoriphagus sp. PR1] gi|126578860|gb|EAZ83024.1| threonine--tRNA ligase [Algoriphagus sp. PR1] Length = 649 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 90/329 (27%), Gaps = 33/329 (10%) Query: 42 KKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 ++E I + + + + I + V + + K L ++ Sbjct: 119 SELEAIEKKMVELAREKNEYIRKDISKSDAVAYYQEKGDEYKLDLLEGLEDGSITFYEQG 178 Query: 100 KLISCIPNVPLEEV--------------PIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 + + N +L R G +E+ E+ Sbjct: 179 NFVDLCRGPHIPNTGFIKAVKLTNIAGAYWRGDENRKMLTRIYGVTFPKAKELKEYLEMI 238 Query: 146 EALGLMDFD---RATKLSGARFSVLTGHLAHLERALGQFMIDLH-----TSEHGYTEVSA 197 E D R +L V G L + ++ + GY +V Sbjct: 239 EEAKKRDHRKLGRELELFTFSEKVGMGLPLWLPKGTLLRERLVNFLKKAQDKAGYQQVIT 298 Query: 198 PLLVRDEAMYGTGQIPKFADDMF------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLP 251 P + +G K+ D F + L P + +Y H+ K LP Sbjct: 299 PHIGHKVLYETSGHYEKYGKDSFQPITTPHEGEEFLLKPMNCPHHCEIYKHKPHSYKELP 358 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 +R+ +R E + G+ R F + + R + E +++ + K Sbjct: 359 IRYAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCRPDQVKEEFIKVIDLVLYVFK 415 Query: 312 RLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 L + D E W Sbjct: 416 ALGFDDFTAQISLRDPENPEKYIGGDEAW 444 >gi|194477315|ref|YP_002049494.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora] gi|171192322|gb|ACB43284.1| Threonyl-tRNA synthetase, class IIa [Paulinella chromatophora] Length = 599 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 8/168 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +G+ + A + + F H E GY + P + +G Sbjct: 208 DLFSIEDEAGSGLVFWHPNGARIRLLIEDFWRQSHL-EAGYELLYTPHIADIRLWKTSGH 266 Query: 212 IPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLPLRFTTLAPSFRSEAGS 267 + +++ MF + + ++ + LP+R+ L +R E Sbjct: 267 LDFYSESMFSPMQVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYERPG 326 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E +E +L+ E IL D Sbjct: 327 ---VMHGLMRVRGFTQDDAHIFCLPEQIGSEVLEVLNLTERILSAFDF 371 >gi|213963363|ref|ZP_03391619.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno] gi|213954031|gb|EEB65357.1| threonyl-tRNA synthetase [Capnocytophaga sputigena Capno] Length = 647 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 49/164 (29%), Gaps = 9/164 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSH 242 + GY +V P + +G K+ D F + L P + +Y+ Sbjct: 286 QAGYEQVVTPHIGHKNLYVTSGHWDKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNS 345 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LP RF +R E + G+ R F + + E E + + Sbjct: 346 HPWSYKDLPKRFAEFGTVYRYEQSG---ELHGLTRVRCFTQDDAHIFCTPEQLDDEFKHV 402 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + L + D + E W +N Sbjct: 403 IDLVLYVFGSLGFDNFTAQVSLRDPENLSKYIGSDENWAKAENA 446 >gi|46199818|ref|YP_005485.1| threonyl-tRNA synthetase [Thermus thermophilus HB27] gi|73919837|sp|Q72HH1|SYT_THET2 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|46197445|gb|AAS81858.1| threonyl-tRNA synthetase [Thermus thermophilus HB27] Length = 659 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 103/353 (29%), Gaps = 52/353 (14%) Query: 6 WIRQ---NPEHLDIAL---KKRHLEPQSEY--------ILSLDEKNRILIKKIEDIRARR 51 + R+ +PE + + + ++ E + +++ K R ++K+ D+ RR Sbjct: 85 FFREKGYDPESVRLGVGPVIEKGFYYDIEAPEPLSDEDLPAIEAKMREILKR--DLPLRR 142 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 S + A G L E E++ ++ + + +P+ Sbjct: 143 FVLSREEALARYRGKDPYKTELILEIPE-GEEISFYQQGDEAYGFTDLCRGPHVPSTGRI 201 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL--MDFDRATKLSGARF----- 164 + R +P + F E L + A K R Sbjct: 202 PPHFKLTHVAGAYWRGDENRPMLQRVYGVAFRTAEELKEYLWQLEEAKKRDHRRLGRELE 261 Query: 165 --------------SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + G++ E + GY V+ P + E +G Sbjct: 262 LFLIDPMVGKGLVLWLPKGNVVREELMAFMREEQV---RRGYQLVTTPHIGSLELYKTSG 318 Query: 211 QIPKFADDMFCTTDGRWLIPTSE---VSLTNLYS-----HEIIESKSLPLRFTTLAPSFR 262 P +A+ F + E + + + + LPLR +R Sbjct: 319 HYPYYAESQFPPISFKERGEEEEYLLKPMNCPHHIRIYAYRKRSYRELPLRLAEFGTVYR 378 Query: 263 SEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 E + G+ R F + + E+ E +L ++ L L Sbjct: 379 YEKAG---ELLGLTRVRGFTQDDAHIFCTPEEVKGEFLGVLDLVLKVFATLGL 428 >gi|266623074|ref|ZP_06116009.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288865169|gb|EFC97467.1| threonine--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 691 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 109/346 (31%), Gaps = 23/346 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN--ETSTLK 81 E + ++ + + +IK E + + + +G V+ +++ E + + Sbjct: 151 SFSREDLDKIEAEMKKIIKAGEKLERFTLPRAEAVKFMEEKGEPYKVELIRDLPEDAEIS 210 Query: 82 E-QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 + K I S +L R G + E Sbjct: 211 FYRQGDFTDLCAGPHLMSTKPIKAFKLTSSSGAYWRGSEKNAMLTRVYGTSFAKKEELNE 270 Query: 141 HFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + E + D ++ + + G +L A + + L +++ D + G Sbjct: 271 YLEYLANIKNRDHNKLGRELELFATVDVIGQGLPLLMPKGAKIIQTLQRWIEDEE-EKRG 329 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTNL-YSHEII 245 Y PL+ + + + + + MF D + + Y Sbjct: 330 YMRTKTPLMAKKDLYVISDHWDHYKEGMFVLGDEEKDDEVFALRPMTCPFQYYVYKQSPK 389 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LP R+ + FR+E + G+ R QF E + R + E + + Sbjct: 390 SYRDLPCRYGETSTLFRNEDSG---EMHGLTRVRQFTISEGHLVVRPDQLEEEFKGCVDL 446 Query: 306 AEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYREI 350 A+ L L L V + D + + E+W + R+I Sbjct: 447 AKYCLTTLGLEEDVTYRMSKWDPEKADHYLGNAEMWDEVEAAMRKI 492 >gi|257875532|ref|ZP_05655185.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257809698|gb|EEV38518.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 646 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 62/190 (32%), Gaps = 9/190 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + ++++D S GY V P++ + +G + +DM Sbjct: 259 VGAGLPFWLPKGATIRRTIERYIVDKEISL-GYQHVYTPIMANVDLYKTSGHWDHYHEDM 317 Query: 220 FCTTDGRWLIPTSEVSLTNLYSH-----EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D + + +I + LP+R L R E A G Sbjct: 318 FPPMDMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALS---G 374 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + R + E +R L + + ++ L D Sbjct: 375 LQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMIGVYEDFNITDYRFRLSYRDPQNKDKYF 434 Query: 335 YDLEVWLAGQ 344 D +W Q Sbjct: 435 DDDAMWENAQ 444 >gi|228967672|ref|ZP_04128693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228792048|gb|EEM39629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] Length = 645 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 59/338 (17%), Positives = 109/338 (32%), Gaps = 18/338 (5%) Query: 27 SEYILSLDEKNRILIKK-IEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E ++++ + ++ + +E +R R + + E L L++ L + + Sbjct: 119 VEDFKKIEKEMQKIVNENLEIVRHEVPRAEALRRFEEISDELKLDLINDLPEDAVISIYE 178 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 V I + + +N +L R G EH Sbjct: 179 QGEFFDLCRGVHLPSTGKIKVFKLLSVAGAYWRGDSNNKMLQRIYGTAFVKKAELDEHLR 238 Query: 144 IGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG----YTEV 195 + E D + KL V G L + A + +I+ + + Y V Sbjct: 239 MLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASLGYDHV 298 Query: 196 SAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLP 251 P+L E +G + D M + L P + +Y ++I + LP Sbjct: 299 YTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHSYRELP 358 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 +R L R E A G+ R + R + E +R+++ E+ K Sbjct: 359 IRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLTLEVYK 415 Query: 312 RLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 L L D + D E+W Q + +E Sbjct: 416 DFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|116515019|ref|YP_802648.1| hypothetical protein BCc_078 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256873|gb|ABJ90555.1| threonyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 642 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 52/158 (32%), Gaps = 6/158 (3%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + + ++ + + ++ Y EV +P+++ +G + +F Sbjct: 257 ESPGMIFWHKNGYIIFKQLENFLRNKLFQNNYIEVKSPIIIDKSLWKKSGHWKHYNQSIF 316 Query: 221 CT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 T + + P + + ++ + + K LP+R R E + G+ R Sbjct: 317 TTKSENNQYCIKPMNCPAHVQIFKYGLKSYKDLPIRMAEFGSCHRQETSGSLH---GLFR 373 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + ++ +E + ++ Sbjct: 374 VRGFTQDDAHIFCTKKQIKSELNHCIRLLFDLYHTFGF 411 >gi|189219251|ref|YP_001939892.1| glycyl-tRNA synthetase (class II) [Methylacidiphilum infernorum V4] gi|189186109|gb|ACD83294.1| Glycyl-tRNA synthetase (class II) [Methylacidiphilum infernorum V4] Length = 457 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 17/184 (9%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ + +P + +FR+E + R +F + EL Sbjct: 154 TAQSIFVQFKNVLESSRMKIPFGIAQIGKAFRNEVN----PRNFIFRSREFEQMELEYFI 209 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + F E+ + + + H + + + F + KTYDLE Sbjct: 210 PPDTGFEYIEQWKEERIAWYESIGIAREHIHLRDVPESERAFYSRKTYDLEYDFPFGRQ- 268 Query: 348 REISSCSTCGNFQSRRMNS------RYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL-ENY 400 E+ + +F ++ Y D K H + S V R L+A+L E+Y Sbjct: 269 -ELEGIAYRTDFDLKQHAIFSGKSMEYYDEERKCKYIPHVVEPSA-GVDRTLLALLCESY 326 Query: 401 LNAD 404 + Sbjct: 327 REEE 330 >gi|119186087|ref|XP_001243650.1| hypothetical protein CIMG_03091 [Coccidioides immitis RS] Length = 560 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 20/172 (11%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 AH+ L F+ ++G+ EV P + + +G + DDM Sbjct: 133 FSPGSPYFHPDGAHIFNKLMSFLR-AQYKQYGFEEVITPTMYKKSLWEKSGHWYIYKDDM 191 Query: 220 FCTTDGRWLIPTSEVSL----------------TNLYSHEIIESKSLPLRFTTLAPSFRS 263 + T +V + L++ + +SLP+RF +P R+ Sbjct: 192 YEVRGRGATGQTVDVEIGEDEQYGLKPMNCPGHCVLFASKTRSYRSLPVRFAEFSPLHRN 251 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 E + G+ R +F + + R E E E L E +L L Sbjct: 252 EISGSLS---GLTRVRRFHQDDGHIFCRPEQIEREIELTLQFTESVLSTFGL 300 >gi|32490830|ref|NP_871084.1| hypothetical protein WGLp081 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340448|sp|Q8D3C0|SYT_WIGBR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|25166036|dbj|BAC24227.1| thrS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 636 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 66/202 (32%), Gaps = 11/202 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D + V H + + + I + Y EV P ++ + +G + Sbjct: 250 LDLFHIYENSPGMVFWHHNGWIIFRILEKFIRKKLKKFYYQEVKTPCIIDHDLWRLSGHL 309 Query: 213 PKFADDMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + MF T + P + + ++ +I K LP R + R+E + Sbjct: 310 DNYKNYMFHTNSENKQYCIKPMNCPAHVLIFKKKIRSYKELPFRISEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF 329 G++R F + + + +E + E+ +V L T Sbjct: 370 H---GLMRIRNFTQDDAHIFCMHDQILSEVSSCIKMIYEVYSCFGFKKILVKLSTR---- 422 Query: 330 SACKTYDLEVWLAGQNLYREIS 351 + E+W + E+S Sbjct: 423 PENRIGSDEIWDFAEKQ-LELS 443 >gi|297205704|ref|ZP_06923099.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16] gi|297148830|gb|EFH29128.1| threonine--tRNA ligase [Lactobacillus jensenii JV-V16] Length = 656 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 112/352 (31%), Gaps = 49/352 (13%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 + D++++I I ++ ++ I + I G ++ + + S L+ + Sbjct: 117 FVDTDKEDQIKITELPELE-------KAIVKLIKNGQA--IEPVMVKKSELEAEFKNDPF 167 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG-------KKPSAIHLSREHF 142 + + S ++ + ++ N + + + + + Sbjct: 168 KMELLKSEGDEVAAFKMGDFVDFGFKALLPNSGKVKHFKLLSVAGAYWQGKSSNPMLQRL 227 Query: 143 EIGEALGLMDFDRATK------------------------LSGARFSVLTGHLAHLERAL 178 D + K GA A + R + Sbjct: 228 FGTAFFKETDLEADLKRRAEIKERDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVI 287 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSE 233 +++ID ++ GY V P+L+ +A +G + +DMF D L P + Sbjct: 288 ERYIIDKELAD-GYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNC 346 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 S +Y H I + LP+R L R E A G+ R + + + E Sbjct: 347 PSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVALE 403 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 E ++L ++ K D+ L D + + E+W Q Sbjct: 404 QVQEEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDEMWERSQK 455 >gi|257865905|ref|ZP_05645558.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257872238|ref|ZP_05651891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257799839|gb|EEV28891.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257806402|gb|EEV35224.1| threonyl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 646 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 62/190 (32%), Gaps = 9/190 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + ++++D S GY V P++ + +G + +DM Sbjct: 259 VGAGLPFWLPKGATIRRTIERYIVDKEISL-GYQHVYTPIMANVDLYKTSGHWDHYHEDM 317 Query: 220 FCTTDGRWLIPTSEVSLTNLYSH-----EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D + + +I + LP+R L R E A G Sbjct: 318 FPPMDMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAELGMMHRYEKSGALS---G 374 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + R + E +R L + + ++ L D Sbjct: 375 LQRVREMTLNDGHTFVRPDQIKEEFKRTLDLMIGVYEDFNITDYRFRLSYRDPQNKDKYF 434 Query: 335 YDLEVWLAGQ 344 D +W Q Sbjct: 435 DDDAMWENAQ 444 >gi|70996464|ref|XP_752987.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|66850622|gb|EAL90949.1| threonyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|159131721|gb|EDP56834.1| threonyl-tRNA synthetase [Aspergillus fumigatus A1163] Length = 535 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 23/177 (12%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------------TDGRWLIPTSE 233 ++G+ EV P + + +G + DDM+ + L P + Sbjct: 114 QYGFREVLTPTIYKRSLWEVSGHWQNYKDDMYEVKGRGATGEADGETGEDESYGLKPMNC 173 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 L+ + + LP+R+ +P R+E A G+ R +F + + R + Sbjct: 174 PGHCLLFKSQNHSYRELPIRYADFSPLHRNEISGALS---GLTRVRRFHQDDGHIFCRPQ 230 Query: 294 DSFTEHERMLSCAEEILKRLDL-HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E L + ++ L YR+V + F LE+W + + RE Sbjct: 231 QIKGEIASALGFVDMVMTTFGLGPYRLVLSTRPEKDFIG----SLELWDSAEAQLRE 283 >gi|329667761|gb|AEB93709.1| threonyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026] Length = 643 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 68/386 (17%), Positives = 126/386 (32%), Gaps = 56/386 (14%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP------QSEY---ILSLDEKNRILIKKIEDIRARRN 52 LDI +R L A+ KR +++ + D++++I + ++ ++ Sbjct: 69 LDI--LRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPELE---- 122 Query: 53 SNSAQIGQAIAEGNLSLVDALKN-ETSTL------KEQLPILEKEEHEVCSSLKKLISCI 105 + +AI G ++K E + K L E++E V + Sbjct: 123 ---KAMQKAIKNGEKIEYTSMKKSELEEIFKDDQFKLDLLKDEEDEVAVYKLGDFVDFGF 179 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL------ 159 + I ++ K S L R +D D + Sbjct: 180 DALLPNTGKIKNFKLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKERD 239 Query: 160 ----------------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRD 203 GA A + R + ++++D ++ GY V P+L+ Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVAD-GYEHVYTPVLMNV 298 Query: 204 EAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +A +G + DDMF D L P + S +Y H I + LP+R L Sbjct: 299 DAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELG 358 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R E A G+ R + + + + E ++L ++ K D+ Sbjct: 359 MMHRYEKSGALS---GLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDY 415 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQ 344 L D + + E+W Q Sbjct: 416 YFRLSYRDPKNTDKYYANDEMWETSQ 441 >gi|296282100|ref|ZP_06860098.1| threonyl-tRNA synthetase [Citromicrobium bathyomarinum JL354] Length = 669 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 94/342 (27%), Gaps = 40/342 (11%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + ++E+ R +I + + I G + + L E + Sbjct: 122 EDLPKIEEEMRRIIAADTPLEREVWTRQQLIQWFKDHGESFKAEW----AAELPEGEELT 177 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL----------------IRSVGKK 131 + + + + T + + + Sbjct: 178 IYRQGDWLDMCRGPHLASTGKLDPQAFKLTRVSGAYWRGDQKNAMLSRIYGTGWLNKKQL 237 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 +H E + + D A SV + + + G Sbjct: 238 NEHLHRLEEAAKRDHRKLGREMDLFHLQEEAHGSVFWHPQGYKIWRQLESYMRRKMDGAG 297 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----------------GRWLIPTSEV 234 Y E+ P ++ +G K+ ++MF D L P + Sbjct: 298 YREIKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNTEDEGELVSKDADWMALKPMNCP 357 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 + ++ I + LP+R + R+E A G++R QF + + E+ Sbjct: 358 AHVLVFKQGITSYRELPIRLGEMGCCHRNEPHGALH---GLMRVRQFTQDDAHIFCTEKQ 414 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 E + A+ + + Y + + F + +D Sbjct: 415 VVEEVRAFIELADAVYRDFGFKYAIKLALRPEQRFGSDADWD 456 >gi|284801950|ref|YP_003413815.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284995092|ref|YP_003416860.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|284057512|gb|ADB68453.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284060559|gb|ADB71498.1| threonyl-tRNA synthetase [Listeria monocytogenes 08-5923] Length = 640 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 113/344 (32%), Gaps = 26/344 (7%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDI-RA----RRNSNSAQ--IGQAIAEGNLSLVDALKN 75 + +E ++S DE + K+++ I R R S + I + A G+ ++ ++ Sbjct: 103 YDIDTEAVIS-DESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIEA 161 Query: 76 ETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + + I + + +N +L R G Sbjct: 162 IPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYGTAF 221 Query: 133 SAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTS 188 + +E ++ + D + K L V G L + A + +I+ + Sbjct: 222 FDKNGLKEFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIV 281 Query: 189 EHG----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLY 240 + Y V P++ E +G + +DMF T L P + +Y Sbjct: 282 DKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIY 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++I + LP+R L R E A G+ R + R + E + Sbjct: 342 KNDIHSYRELPIRIAELGLMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFK 398 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 R++ E+ K D+ L D + D +W Q Sbjct: 399 RVVELILEVYKDFDITDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 442 >gi|119494491|ref|XP_001264141.1| threonyl-tRNA synthetase [Neosartorya fischeri NRRL 181] gi|119412303|gb|EAW22244.1| threonyl-tRNA synthetase [Neosartorya fischeri NRRL 181] Length = 530 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 23/177 (12%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------------TDGRWLIPTSE 233 ++G+ EV P + + +G + DDM+ + L P + Sbjct: 109 QYGFREVLTPTIYKRSLWEVSGHWQNYKDDMYEVKGRGATGEADGETGEDESYGLKPMNC 168 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 L+ + + LP+R+ +P R+E A G+ R +F + + R + Sbjct: 169 PGHCLLFKSQNHSYRELPIRYADFSPLHRNEISGALS---GLTRVRRFHQDDGHIFCRPQ 225 Query: 294 DSFTEHERMLSCAEEILKRLDL-HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E L + ++ L YR+V + F LE+W + + RE Sbjct: 226 QIKGEIASALGFVDMVMTTFGLGPYRLVLSTRPEKDFIG----SLELWDSAETQLRE 278 >gi|256850831|ref|ZP_05556220.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260661042|ref|ZP_05861956.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|256615893|gb|EEU21081.1| threonyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260547979|gb|EEX23955.1| threonyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] Length = 643 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 112/352 (31%), Gaps = 49/352 (13%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 + D++++I I ++ ++ I + I G ++ + + S L+ + Sbjct: 104 FVDTDKEDQIKITELPELE-------KAIVKLIKNGQA--IEPVMVKKSELEAEFKNDPF 154 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG-------KKPSAIHLSREHF 142 + + S ++ + ++ N + + + + + Sbjct: 155 KMELLKSEGDEVAAFKMGDFVDFGFKALLPNSGKVKHFKLLSVAGAYWQGKSSNPMLQRL 214 Query: 143 EIGEALGLMDFDRATK------------------------LSGARFSVLTGHLAHLERAL 178 D + K GA A + R + Sbjct: 215 FGTAFFKETDLEADLKRRAEIKERDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVI 274 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSE 233 +++ID ++ GY V P+L+ +A +G + +DMF D L P + Sbjct: 275 ERYIIDKELAD-GYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNC 333 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 S +Y H I + LP+R L R E A G+ R + + + E Sbjct: 334 PSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVALE 390 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 E ++L ++ K D+ L D + + E+W Q Sbjct: 391 QVQEEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDEMWERSQK 442 >gi|220928798|ref|YP_002505707.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|219999126|gb|ACL75727.1| threonyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 645 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 75/209 (35%), Gaps = 20/209 (9%) Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---CTTDGRWLIPTSE 233 Q ++ GY PL+ + + +G + D MF ++ Sbjct: 275 QTLQRFVEDEEERRGYVLTKTPLMAKSDLYKLSGHWQHYKDGMFLLGDEEKDEEVMALRP 334 Query: 234 VSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 ++ +Y+ ++ + LP+R+ + FR+EA + G++R QF E + Sbjct: 335 MTCPFQFMIYNTKLHSYRDLPIRYGETSTLFRNEASG---EMHGLIRVRQFTISEGHLVC 391 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYRE 349 E E + ++ + +++ L + V + D + E W Q+ R Sbjct: 392 TPEQLEDEFKGVVDLIKFMMETLGIQDDVTYRFSKWDPKNKEKYIGNEEDWENVQDQMRT 451 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 I + + Y++ ++ + Sbjct: 452 I------LDH----LKIDYKEAEGEAAFY 470 >gi|328953980|ref|YP_004371314.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328454304|gb|AEB10133.1| threonyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 640 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 7/164 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +G + A L L F H GY V P L++ + +G + ++M Sbjct: 260 AGPGLVIYHPKGARLRLVLEDFERREHL-RRGYQIVMGPTLLKLDLWKRSGHFENYRENM 318 Query: 220 FCTTD---GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + T + P + ++ +Y I + LPLR L R E G+ Sbjct: 319 YFTEIEGIDYGIKPMNCLAHMLIYKSSIRSYRELPLRLFELGTVHRHERSGVLH---GLT 375 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 R QF + + + R + TE ++ E++ Y V Sbjct: 376 RVRQFTQDDAHILCRPDQVETEIAGVIDFVAEVMAVFGFEYEVE 419 >gi|315282482|ref|ZP_07870886.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313613866|gb|EFR87606.1| threonyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 640 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 113/344 (32%), Gaps = 26/344 (7%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDI-RA----RRNSNSAQ--IGQAIAEGNLSLVDALKN 75 + +E ++S DE + K+++ I R R S + I + A G+ ++ ++ Sbjct: 103 YDIDTEAVIS-DESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDHYKLELIEA 161 Query: 76 ETSTLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + + I + + +N +L R G Sbjct: 162 IPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYGTAF 221 Query: 133 SAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTS 188 + +E ++ + D + K L V G L + A + +I+ + Sbjct: 222 FDKNGLKEFIQMQKEAKERDHRKLGKELDLFTNSIEVGQGLPLWLPKGATIRRVIERYIV 281 Query: 189 EHG----YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLY 240 + Y V P++ E +G + +DMF T L P + +Y Sbjct: 282 DKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIY 341 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 ++I + LP+R L R E A G+ R + R + E + Sbjct: 342 KNDIHSYRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFK 398 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 R++ E+ K D+ L D + D +W Q Sbjct: 399 RVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 442 >gi|228941754|ref|ZP_04104301.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974678|ref|ZP_04135244.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981272|ref|ZP_04141572.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228778472|gb|EEM26739.1| Threonyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228785081|gb|EEM33094.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817966|gb|EEM64044.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942359|gb|AEA18255.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 645 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|229019800|ref|ZP_04176603.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273] gi|229026025|ref|ZP_04182408.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272] gi|228735241|gb|EEL85853.1| Threonyl-tRNA synthetase [Bacillus cereus AH1272] gi|228741525|gb|EEL91722.1| Threonyl-tRNA synthetase [Bacillus cereus AH1273] Length = 645 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|229099037|ref|ZP_04229971.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|229118067|ref|ZP_04247426.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228665290|gb|EEL20773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228684265|gb|EEL38209.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 645 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|229169303|ref|ZP_04297013.1| Threonyl-tRNA synthetase [Bacillus cereus AH621] gi|228614066|gb|EEK71181.1| Threonyl-tRNA synthetase [Bacillus cereus AH621] Length = 645 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|218899729|ref|YP_002448140.1| threonyl-tRNA synthetase [Bacillus cereus G9842] gi|228903093|ref|ZP_04067229.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228910399|ref|ZP_04074214.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|218543438|gb|ACK95832.1| threonyl-tRNA synthetase [Bacillus cereus G9842] gi|228849165|gb|EEM94004.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228856502|gb|EEN01026.1| Threonyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 645 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|42783753|ref|NP_981000.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|206969938|ref|ZP_03230892.1| threonyl-tRNA synthetase [Bacillus cereus AH1134] gi|218234238|ref|YP_002369371.1| threonyl-tRNA synthetase [Bacillus cereus B4264] gi|228923319|ref|ZP_04086607.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954844|ref|ZP_04116864.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960844|ref|ZP_04122479.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048283|ref|ZP_04193851.1| Threonyl-tRNA synthetase [Bacillus cereus AH676] gi|229072077|ref|ZP_04205286.1| Threonyl-tRNA synthetase [Bacillus cereus F65185] gi|229081828|ref|ZP_04214320.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|229112040|ref|ZP_04241583.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|229129859|ref|ZP_04258825.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|229147134|ref|ZP_04275493.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|229152770|ref|ZP_04280953.1| Threonyl-tRNA synthetase [Bacillus cereus m1550] gi|229180894|ref|ZP_04308229.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W] gi|229192776|ref|ZP_04319734.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|229198724|ref|ZP_04325422.1| Threonyl-tRNA synthetase [Bacillus cereus m1293] gi|296505048|ref|YP_003666748.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|42739683|gb|AAS43608.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|206735626|gb|EDZ52794.1| threonyl-tRNA synthetase [Bacillus cereus AH1134] gi|218162195|gb|ACK62187.1| threonine--tRNA ligase [Bacillus cereus B4264] gi|228584746|gb|EEK42866.1| Threonyl-tRNA synthetase [Bacillus cereus m1293] gi|228590615|gb|EEK48476.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228602451|gb|EEK59937.1| Threonyl-tRNA synthetase [Bacillus cereus 172560W] gi|228630590|gb|EEK87236.1| Threonyl-tRNA synthetase [Bacillus cereus m1550] gi|228636383|gb|EEK92854.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228653550|gb|EEL09422.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|228671363|gb|EEL26664.1| Threonyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228701416|gb|EEL53910.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228711011|gb|EEL62977.1| Threonyl-tRNA synthetase [Bacillus cereus F65185] gi|228723008|gb|EEL74385.1| Threonyl-tRNA synthetase [Bacillus cereus AH676] gi|228798866|gb|EEM45845.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804833|gb|EEM51432.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836273|gb|EEM81626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296326100|gb|ADH09028.1| threonyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|324328469|gb|ADY23729.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 645 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|163942310|ref|YP_001647194.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|229013779|ref|ZP_04170907.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|229062260|ref|ZP_04199581.1| Threonyl-tRNA synthetase [Bacillus cereus AH603] gi|229135411|ref|ZP_04264199.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|163864507|gb|ABY45566.1| threonyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|228648054|gb|EEL04101.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228716988|gb|EEL68669.1| Threonyl-tRNA synthetase [Bacillus cereus AH603] gi|228747448|gb|EEL97323.1| Threonyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 645 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|228987823|ref|ZP_04147932.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158179|ref|ZP_04286246.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228625137|gb|EEK81897.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228771871|gb|EEM20328.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 645 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|229032221|ref|ZP_04188194.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271] gi|229076078|ref|ZP_04209046.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18] gi|229105203|ref|ZP_04235852.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228678129|gb|EEL32357.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228706941|gb|EEL59146.1| Threonyl-tRNA synthetase [Bacillus cereus Rock4-18] gi|228729001|gb|EEL80004.1| Threonyl-tRNA synthetase [Bacillus cereus AH1271] Length = 645 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|282934500|ref|ZP_06339755.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] gi|281301447|gb|EFA93736.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 644 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 112/352 (31%), Gaps = 49/352 (13%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 + D++++I I ++ ++ I + I G ++ + + S L+ + Sbjct: 105 FVDTDKEDQIKITELPELE-------KAIVKLIKNGQA--IEPVMVKKSELEAEFKNDPF 155 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG-------KKPSAIHLSREHF 142 + + S ++ + ++ N + + + + + Sbjct: 156 KMELLKSEGDEVAAFKMGDFVDFGFKALLPNSGKVKHFKLLSVAGAYWQGKSSNPMLQRL 215 Query: 143 EIGEALGLMDFDRATK------------------------LSGARFSVLTGHLAHLERAL 178 D + K GA A + R + Sbjct: 216 FGTAFFKETDLEADLKRRAEIKERDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVI 275 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSE 233 +++ID ++ GY V P+L+ +A +G + +DMF D L P + Sbjct: 276 ERYIIDKELAD-GYQHVYTPVLMNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNC 334 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 S +Y H I + LP+R L R E A G+ R + + + E Sbjct: 335 PSHIQVYKHHIRSYRELPIRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVALE 391 Query: 294 DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 E ++L ++ K D+ L D + + E+W Q Sbjct: 392 QVQEEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYFANDEMWERSQK 443 >gi|241668765|ref|ZP_04756343.1| threonyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877296|ref|ZP_05250006.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843317|gb|EET21731.1| threonine-tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 635 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 7/153 (4%) Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--- 222 + R + +M + ++G E+ PL+ +G K+A++MF T Sbjct: 264 FWHDSGVRIWREVEDYMRASN-KKYGCGEIRTPLIADFSLWEKSGHASKYAENMFATKSE 322 Query: 223 TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 + P + + +Y+ ++ + LP+R R+E + G++R F Sbjct: 323 NRDFAIRPMNCPTCVQVYNTKLHSYRDLPIRMAEFGIVHRNEPSGSLH---GLMRVRSFT 379 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + E E M+ E+ K Sbjct: 380 QDDGHIFCAPEQVEEEVILMVKQCFEVYKDFGF 412 >gi|229175285|ref|ZP_04302800.1| Threonyl-tRNA synthetase [Bacillus cereus MM3] gi|228608117|gb|EEK65424.1| Threonyl-tRNA synthetase [Bacillus cereus MM3] Length = 645 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|217962055|ref|YP_002340625.1| threonyl-tRNA synthetase [Bacillus cereus AH187] gi|222098038|ref|YP_002532095.1| threonyl-tRNA synthetase [Bacillus cereus Q1] gi|229141301|ref|ZP_04269839.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|217064460|gb|ACJ78710.1| threonyl-tRNA synthetase [Bacillus cereus AH187] gi|221242096|gb|ACM14806.1| threonyl-tRNA synthetase [Bacillus cereus Q1] gi|228642082|gb|EEK98375.1| Threonyl-tRNA synthetase [Bacillus cereus BDRD-ST26] Length = 645 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 453 >gi|30022651|ref|NP_834282.1| threonyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|29898209|gb|AAP11483.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579] Length = 646 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 235 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 294 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 295 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 354 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 355 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 411 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 412 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 454 >gi|229163567|ref|ZP_04291517.1| Threonyl-tRNA synthetase [Bacillus cereus R309803] gi|228619949|gb|EEK76825.1| Threonyl-tRNA synthetase [Bacillus cereus R309803] Length = 646 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 235 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 294 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 295 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 354 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 355 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 411 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 412 LEVYKDFGLENYSFRLSYRDPADTKKYYADDEMWEKAQGMLKE 454 >gi|313159213|gb|EFR58586.1| threonine--tRNA ligase [Alistipes sp. HGB5] Length = 650 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 89/334 (26%), Gaps = 39/334 (11%) Query: 41 IKKIEDIRARRN--SNSAQIGQAIAEGNLSLVDALK---NETSTLKEQLPILEKEEHEVC 95 I + + + + S Q + + +ALK + K +L ++ Sbjct: 112 ITEADLPKIEQKMQELSRNKEQLVRR-EVPKAEALKTFTEKGDQYKVELISDLQDGTISF 170 Query: 96 SSLKKLISCIPNVPLEEV-PIGTSANENILIRSVGKKPSAI-------------HLSREH 141 + + I ++ + E+ Sbjct: 171 YTNGAFTDLCRGPHIPNTGYIKALKLTSVAGAYWRGNEKNKMLTRIYGISFPKKSMLDEY 230 Query: 142 FEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192 + E D + K G + A L L QF+ ++ E+GY Sbjct: 231 LVMMEEAKKRDHRKLGKDLELFCFSQRVGQGLPLWLPKGAALRDRLEQFLRNVQ-KEYGY 289 Query: 193 TEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHEII-----E 246 +V P + E +G K+ D + + EI Sbjct: 290 QQVITPHIGNKELYVTSGHYAKYGKDSFQPIHTPIEGEEYLLKPMNCPHHCEIYRSKPRS 349 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 K LP+R +R E + G+ R F + + R + E ER++ Sbjct: 350 YKELPVRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFVRPDQLLEEFERVIDIV 406 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 I K L + D E W Sbjct: 407 LYIFKTLKFDNYTAQISLRDPNNKEKYIGSDENW 440 >gi|167752344|ref|ZP_02424471.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216] gi|167660585|gb|EDS04715.1| hypothetical protein ALIPUT_00588 [Alistipes putredinis DSM 17216] Length = 651 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 53/329 (16%), Positives = 88/329 (26%), Gaps = 35/329 (10%) Query: 43 KIEDIRARRNSNSAQIGQAIAEGNLSLVDALK---NETSTLKEQLPILEKEEHEVCSSLK 99 +E I + S Q I +S DALK + K +L ++ + Sbjct: 116 DLETIEKKMIELSRNKEQLIRT-EVSKADALKNFTEKGDPYKVELIRDLEDGTISFYTNG 174 Query: 100 KLISCIPNVPLEEV--------------PIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 L + +L R G + E+ + Sbjct: 175 AFTDLCRGPHLPNTGLIKAIKLTSVAGAYWRGNEKNKMLTRIYGISFPKKSMLDEYLAMM 234 Query: 146 EALGLMDFDRATK---LSGARFSVLTGHLAHLERAL-----GQFMIDLHTSEHGYTEVSA 197 E D + K L V G L + + + E+GY +V Sbjct: 235 EEAKKRDHRKLGKELELFCFSQRVGQGLPLWLPKGAALRDRLEQFLRGVQKEYGYQQVIT 294 Query: 198 PLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHEII-----ESKSLP 251 P + E +G K+ D + + EI K LP Sbjct: 295 PHIGNKELYVTSGHYAKYGKDSFQPIHTPIEGEEYLLKPMNCPHHCEIYRSKPRSYKELP 354 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 +R +R E + G+ R F + + R + E E+++ I K Sbjct: 355 VRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHMFVRPDQLLEEFEKVIDIVLYIFK 411 Query: 312 RLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 L + D E W Sbjct: 412 TLKFDNYTAQISLRDPNNKEKYIGSDENW 440 >gi|167771139|ref|ZP_02443192.1| hypothetical protein ANACOL_02493 [Anaerotruncus colihominis DSM 17241] gi|167666809|gb|EDS10939.1| hypothetical protein ANACOL_02493 [Anaerotruncus colihominis DSM 17241] Length = 456 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 62/191 (32%), Gaps = 15/191 (7%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP-T 231 + ++ + + + + + M+ T Q +L P T Sbjct: 110 WSNEQMLAYIREHNIKCPECGGTNFTDIRKFNLMFKTFQGVTED-----AKSELYLRPET 164 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ N + + K +P + SFR+E + R +F + EL + Sbjct: 165 AQGIFVNFMNVQRTTRKKVPFGVCQIGKSFRNEI----TPGNFIFRIREFEQMELEFFCK 220 Query: 292 EEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + + S E L L + + R+ +L F + T D+E + Sbjct: 221 PDTDLEWFQYWRSFCENWLLSLGMTKDNMRLRDHAKEELSFYSKATTDIEYLFPF--GWG 278 Query: 349 EISSCSTCGNF 359 E+ + ++ Sbjct: 279 ELWGIADRTDY 289 >gi|116075451|ref|ZP_01472711.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916] gi|116067648|gb|EAU73402.1| threonyl-tRNA synthetase [Synechococcus sp. RS9916] Length = 609 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 83/316 (26%), Gaps = 27/316 (8%) Query: 23 LEPQS-EYILSLDEK--NRILIKKIE-DIRARRNSNSAQIGQAIAEGNLSLVD-ALKNET 77 + S + D K + +IK I + R S +A + + + Sbjct: 70 YDFDSPDPFTEADLKAIRKEMIKIINRKLPLERVEVSRAEAEAKIKAQNEPYKLEILSGI 129 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI---------GTSANENILIRSV 128 + E+ S + E + + + I + Sbjct: 130 QEPITLYTLGEEWWDLCAGPHVANTSELNAKAFELESVAGAYWRGDENNAQLQRIYGTAW 189 Query: 129 GKKPSAIHLSREHFEIGEALGLM-----DFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 R E D +GA A + + F Sbjct: 190 ETPEQLAEHKRRKEEALRRDHRRIGTDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWR 249 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS-- 241 H E GY + P + +G + +++ MF + + Sbjct: 250 QAH-FEGGYELLYTPHVADISLWKTSGHLDFYSESMFGPMVVDEREYQLKPMNCPFHVLT 308 Query: 242 --HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + + LP+R+ L +R E G++R F + + E E Sbjct: 309 YASTLRSYRELPIRWAELGTVYRYERPG---VMHGLMRVRGFTQDDAHVFCLPEQISDEI 365 Query: 300 ERMLSCAEEILKRLDL 315 R+L E IL D Sbjct: 366 LRILDLTERILSTFDF 381 >gi|260434317|ref|ZP_05788287.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109] gi|260412191|gb|EEX05487.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8109] Length = 611 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D +GA A + + +F H E GY + P + Sbjct: 215 KDLDLFSIEDEAGAGLVFWHPRGARMRLLIEEFWRQAH-FEGGYELLYTPHVADISLWKT 273 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLPLRFTTLAPSFRSE 264 +G + +A+ MF + + + ++ + LP+R+ L +R E Sbjct: 274 SGHLDFYAESMFGPMEVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE 333 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E ++L E IL D Sbjct: 334 RPG---VMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERILSSFDF 381 >gi|33519811|ref|NP_878643.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus] gi|33504156|emb|CAD83418.1| threonyl-tRNA synthetase [Candidatus Blochmannia floridanus] Length = 410 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 51/167 (30%), Gaps = 10/167 (5%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + I ++ Y EV +P ++ TG Sbjct: 19 LDLYHLQEDAPGMVFWHVNGWTIFQELKNFIRKKLQQYQYQEVKSPTMIDRVLWKKTGHW 78 Query: 213 PKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + + +F T + P + +++H + K LP+R R+E + Sbjct: 79 DNYYEHIFTTDSENRKYCIKPMNCPGHIQIFNHGLKTYKDLPIRMAEFGSCHRNELSGSL 138 Query: 270 RDTRGMLRQHQFWKCELVSITR----EEDSFTEHERMLSCAEEILKR 312 G++R +F + + + + + M + Sbjct: 139 H---GLMRIREFTQDDAHIFCALTQIPNELYHCIKMMYDIYHVFNFK 182 >gi|210615498|ref|ZP_03290625.1| hypothetical protein CLONEX_02841 [Clostridium nexile DSM 1787] gi|210150347|gb|EEA81356.1| hypothetical protein CLONEX_02841 [Clostridium nexile DSM 1787] Length = 657 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 96/340 (28%), Gaps = 41/340 (12%) Query: 43 KIEDIRARRNSNSAQIGQAIA-EGNLSLVDALKNETST-LKEQLPILEKEEHEVCSSLKK 100 +E I + + E + AL E K +L E+ + + Sbjct: 117 DLETIEKEMKKIIKEGAKIERFELPRAEAIALMEEKGEPYKVELINDLPEDSVISFYRQG 176 Query: 101 LISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 + P + N +L R G S + H E Sbjct: 177 EFVDLCAGPHLMSTKGVKAFKLISSSGAYWRGNENNKMLTRIYGTAYSKKDELKAHMEHL 236 Query: 146 EALGLMD---FDRATKLSGARFSVLTGHLAHL-----ERALGQFMIDLHTSEHGYTEVSA 197 E + D R +L + G + Q I+ GY Sbjct: 237 EDIKKRDHNKLGREMELFTTVDVIGQGLPLLMPKGAAMVQTMQRWIEDEEERRGYMRTKT 296 Query: 198 PLLVRDEAMYGTGQIPKFADDMF------CTTDGRWLIPTSEVSLTNL-YSHEIIESKSL 250 PL+ + + + + + MF + + + Y + L Sbjct: 297 PLMAKKDLYVISDHWGHYKEGMFVLGDEEKEGEEVFALRPMTCPFQYYVYKQSQKSYRDL 356 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 P R+ + FR+E + G+ R QF E + R + E + + A+ L Sbjct: 357 PCRYGETSTLFRNEDSG---EMHGLTRVRQFTISEGHLVIRPDQVEDEFKGCVDLAKYCL 413 Query: 311 KRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 L + T L + D +L + ++ E+ Sbjct: 414 TTLGV----EEDVTYRLSLADPDNMD--KYLGTREMWDEV 447 >gi|113954220|ref|YP_731070.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311] gi|123031674|sp|Q0I902|SYT_SYNS3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|113881571|gb|ABI46529.1| threonyl-tRNA synthetase [Synechococcus sp. CC9311] Length = 617 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D +GA A + + F H E GY + P + Sbjct: 215 KDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAH-FEGGYELLYTPHVADISLWKT 273 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLPLRFTTLAPSFRSE 264 +G + +A+ MF + + + ++ + LP+R+ L +R E Sbjct: 274 SGHLDFYAESMFGPMEVDERQYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE 333 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E R+L+ E IL D Sbjct: 334 RPG---VMHGLMRVRGFTQDDAHVFCLPEQISDEILRILNLTERILSTFDF 381 >gi|299140628|ref|ZP_07033766.1| threonine--tRNA ligase [Prevotella oris C735] gi|298577594|gb|EFI49462.1| threonine--tRNA ligase [Prevotella oris C735] Length = 649 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 47/167 (28%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEII-- 245 + Y EV P + +G + D F + + E+ Sbjct: 289 PYNYQEVITPGIGGKSLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEVYAR 348 Query: 246 ---ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LPLR FR E + G+ R F + + R + E E Sbjct: 349 KPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVRPDQVKAEFETN 405 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + ++ K + D E+W QN RE Sbjct: 406 IDIILKVFKTFQFDNYEAQISLRDPKDKEKYIGSDEIWEESQNAIRE 452 >gi|281423114|ref|ZP_06254027.1| threonine--tRNA ligase [Prevotella oris F0302] gi|281402450|gb|EFB33281.1| threonine--tRNA ligase [Prevotella oris F0302] Length = 649 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 47/167 (28%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEII-- 245 + Y EV P + +G + D F + + E+ Sbjct: 289 PYNYQEVITPGIGGKSLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEVYAR 348 Query: 246 ---ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LPLR FR E + G+ R F + + R + E E Sbjct: 349 KPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVRPDQVKAEFETN 405 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + ++ K + D E+W QN RE Sbjct: 406 IDIILKVFKTFQFDNYEAQISLRDPKDKEKYIGSDEIWEESQNAIRE 452 >gi|227504970|ref|ZP_03935019.1| threonyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] gi|227198420|gb|EEI78468.1| threonyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] Length = 687 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 68/217 (31%), Gaps = 23/217 (10%) Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 E + +D G+ F V + A + + + H + GY+ VS P Sbjct: 263 EKRDHRRLGQELDLFSFPDEIGSGFPVFHPNGAVVRMEMEEHSRRRHIQD-GYSFVSTPH 321 Query: 200 LVRDEAMYGTGQIPKFADDMFCTTD----------------GRWLIPTSEVSLTNLYSHE 243 L + + +G + +AD MF + P + +++ Sbjct: 322 LTKGDLFKKSGHLDFYADGMFPPMQLDGEYDEDGNCTKQPQDYYAKPMNCPMHNLIFASR 381 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + LPLR +R E G+ R F + + E E ++L Sbjct: 382 GRSYRELPLRLFEFGTVYRYEKSG---VIHGLTRARGFTQDDSHIYCTPEQLEDELTKVL 438 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 +LK L + L T D E+W Sbjct: 439 DFIISLLKDYGLDDFYLELSTKD---PNKYVGSDEIW 472 >gi|239627750|ref|ZP_04670781.1| glycyl-tRNA synthetase [Clostridiales bacterium 1_7_47_FAA] gi|239517896|gb|EEQ57762.1| glycyl-tRNA synthetase [Clostridiales bacterium 1_7_47FAA] Length = 462 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 23/278 (8%) Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI---HLSREHFEI 144 E + + + +K + P + I + + +G + +E F Sbjct: 40 ELKNNVKKAWWQKFVMESPYNVGVDCAILMNPQTWVASGHLGGFSDPLMDCKQCKERFRA 99 Query: 145 GEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDE 204 + + + + K+ G+ A + + Q++ D + + + Sbjct: 100 DKLIEDFNDEHGIKIEGSVD-------AWSQEQMKQYIDDNNICCPSCGAHDFTEIRQFN 152 Query: 205 AMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 M+ T Q +D T T++ N + + K +P + SFR+E Sbjct: 153 LMFKTFQ--GVTEDAKNT--VYLRPETAQGIFVNFKNVQRTSRKKVPFGIAQIGKSFRNE 208 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH---YRVVS 321 R +F + EL + + + LK L + R Sbjct: 209 I----TPGNFTFRTREFEQMELEFFCKPDTDLEWFAYWKQYCIDWLKALGIKEDEMRARD 264 Query: 322 LCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +L F + T DLE + E+ + ++ Sbjct: 265 HEQEELSFYSKATTDLEFLFPF--GWGELWGIADRTDY 300 >gi|209884754|ref|YP_002288611.1| threonyl-tRNA synthetase [Oligotropha carboxidovorans OM5] gi|209872950|gb|ACI92746.1| threonyl-tRNA synthetase [Oligotropha carboxidovorans OM5] Length = 680 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 93/314 (29%), Gaps = 22/314 (7%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR---RNSNSAQIGQAIAEGNLSLVDALKN-E 76 R+ E ++++K R +I + R+ + LVDA+ + Sbjct: 132 RNEPFTPEDFAAIEKKMREIIARDAPFTKEVWTRDDTKKVFADKGEAFKVELVDAIPADQ 191 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + + +Q + +S K+ + + + +N +L R G + Sbjct: 192 SIKIYKQGEWFDLCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFANQQ 251 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS------EH 190 + + E D R + G A G + + Sbjct: 252 ALDAYLKQLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTVFQEIIAYMRRRLAA 311 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEVSLTNLYS 241 Y EV+AP ++ +G + ++MF + P + ++ Sbjct: 312 DYDEVNAPQMLDKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHVLIFK 371 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 H + + LP+R R E A G++R F + + E+ E + Sbjct: 372 HGLKSYRELPIRLAEFGVVHRYEPSGA---MHGLMRVRGFTQDDAHIFCTEQQLAEECLK 428 Query: 302 MLSCAEEILKRLDL 315 + Sbjct: 429 INDLILSTYADFGF 442 >gi|120434969|ref|YP_860655.1| threonyl-tRNA synthetase [Gramella forsetii KT0803] gi|117577119|emb|CAL65588.1| threonyl-tRNA synthetase [Gramella forsetii KT0803] Length = 667 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 49/158 (31%), Gaps = 9/158 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSH 242 + GY V +P + E +G K+ +D F + L P + +Y+ Sbjct: 304 KAGYEMVVSPHIGSKELYVTSGHYAKYGEDSFQPISTPNEGEEFMLKPMNCPHHCEMYNA 363 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + LP RF +R E + G+ R F + + E E +++ Sbjct: 364 SSWSYRDLPKRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCMPEQLDEEFKKV 420 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + + L + D + W Sbjct: 421 IDLTLYVFSSLGFEDFTAQVSLRDPDNKEKYIGSDDAW 458 >gi|309803316|ref|ZP_07697413.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|308164824|gb|EFO67074.1| threonine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] Length = 643 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 112/336 (33%), Gaps = 21/336 (6%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE-Q 83 ++ + L+++ + +K E I S + + + ++ LK E + + Sbjct: 113 IKASELPDLEKEMQKKVKNGEKI--EYKIVSKSELLDLFKDDPYKLELLKEEADEVAVYK 170 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 L + + + ++ +L R G + + Sbjct: 171 LEDFVDFGFNALLLNTGKLKHFKLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQ 230 Query: 144 IGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 E + D + GA A + R + +++ID ++ GY Sbjct: 231 RREDIKERDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVAD-GYQH 289 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKS 249 V P+L+ +A +G + +DMF D L P + S +Y+H I + Sbjct: 290 VYTPVLMNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRE 349 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LP+R L R E A G+ R + + + + +E ++L E+ Sbjct: 350 LPIRIAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEV 406 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 + D+ L D + + E+W Q Sbjct: 407 YRDFDITDYYFRLSYRDPKNTDKYFANDEMWERSQK 442 >gi|150400672|ref|YP_001324438.1| prolyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] gi|171460849|sp|A6UTK4|SYP_META3 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|150013375|gb|ABR55826.1| prolyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] Length = 456 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 92/289 (31%), Gaps = 22/289 (7%) Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYT 193 + S + I E G+ D K G + A+ + + + E + Sbjct: 1 MENFSEWYHNILETAGIYDLRYPLKGCGVYLPYGFKIRRYAFEAIRDMLDESNHDEALFP 60 Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTSEVSLTNLYSHEII 245 + L+ E I F ++++ T L PTSE + ++ I Sbjct: 61 MLIPEDLLAKEG----EHIKGFEEEVYWVTHGGTTPLDVKLALRPTSETPIYHMMKLWIK 116 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERML 303 LP++ + SFR E + TR ++R + + E++ + + L Sbjct: 117 VHTDLPIKIYQIVNSFRYE----TKHTRPLIRLREIMTFKEAHTAHSTSEEAEAQVQTAL 172 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRR 363 + + R+ + V D A T + +I + G ++ Sbjct: 173 NIYKTFFDRMGVPTIVSQRPEWDKFPGADYTMAFDTIFP-DGKTMQIGTVHNLGQHFAKT 231 Query: 364 MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 + P T G R + +I+ + + G + P V Sbjct: 232 FELEFETPEGGKDYAYQTCYG---ISDRIIASIIALHGDEKGLILPPEV 277 >gi|268319910|ref|YP_003293566.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785] gi|262398285|emb|CAX67299.1| threonyl-tRNA synthetase 1 [Lactobacillus johnsonii FI9785] Length = 643 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 67/386 (17%), Positives = 125/386 (32%), Gaps = 56/386 (14%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP------QSEY---ILSLDEKNRILIKKIEDIRARRN 52 LDI +R L A+ KR +++ + D++++I + ++ ++ Sbjct: 69 LDI--LRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPELE---- 122 Query: 53 SNSAQIGQAIAEGNLSLVDALKN-------ETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 + +AI G ++K + K L E++E V + Sbjct: 123 ---KAMQKAIKNGEKIEYTSMKKSELEEIFKDDQFKLDLLKDEEDEVAVYKLGDFVDFGF 179 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL------ 159 + I ++ K S L R +D D + Sbjct: 180 DALLPNTGKIKNFKLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKERD 239 Query: 160 ----------------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRD 203 GA A + R + ++++D ++ GY V P+L+ Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVAD-GYEHVYTPVLMNV 298 Query: 204 EAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +A +G + DDMF D L P + S +Y H I + LP+R L Sbjct: 299 DAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELG 358 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R E A G+ R + + + + E ++L ++ K D+ Sbjct: 359 MMHRYEKSGALS---GLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDY 415 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQ 344 L D + + E+W Q Sbjct: 416 YFRLSYRDPKNTDKYYANDEMWEKSQ 441 >gi|152976959|ref|YP_001376476.1| threonyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025711|gb|ABS23481.1| threonyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 643 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 232 DEHMRMLEEAKERDHRKLGKELKLFTNNQKVGQGLPLWLPKGATIRRIIERYIVDKEVSL 291 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 292 GYNHVYTPVLGSRELYETSGHWNHYRDGMFPSMQMDNEELVLRPMNCPHHMMVYKNDIHS 351 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 352 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 408 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 409 LEVYKDFGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKE 451 >gi|119505276|ref|ZP_01627351.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] gi|119458967|gb|EAW40067.1| threonyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] Length = 639 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 47/166 (28%), Gaps = 6/166 (3%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D A V + + + Y E+ P +V +G Sbjct: 250 LDLFHTQEEAPGMVFWHPAGWTIYQVIESYMRKQQLRFDYEEIKTPQVVDISLWQRSGHA 309 Query: 213 PKFADDMFCTTDGRWLIPTSEVSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 KFA MF ++ +++ + + LPLR R+E + Sbjct: 310 DKFASGMFTLDADDRQFAVKPMNCPCHVQVFNQGLKSYRDLPLRLAEFGSCHRNEPSGSL 369 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E +E + E+ Sbjct: 370 H---GIMRVRGFTQDDAHIFCTEAQIQSEVATFIDMLHEVYADFGF 412 >gi|30264646|ref|NP_847023.1| threonyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47530117|ref|YP_021466.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187467|ref|YP_030719.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|49481700|ref|YP_038622.1| threonyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140935|ref|YP_085897.1| threonyl-tRNA synthetase [Bacillus cereus E33L] gi|65321944|ref|ZP_00394903.1| COG0441: Threonyl-tRNA synthetase [Bacillus anthracis str. A2012] gi|165871455|ref|ZP_02216102.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167636725|ref|ZP_02395009.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167642081|ref|ZP_02400304.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170689721|ref|ZP_02880895.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170708708|ref|ZP_02899146.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177653139|ref|ZP_02935426.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|196042361|ref|ZP_03109631.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99] gi|218905803|ref|YP_002453637.1| threonyl-tRNA synthetase [Bacillus cereus AH820] gi|225866553|ref|YP_002751931.1| threonyl-tRNA synthetase [Bacillus cereus 03BB102] gi|227817360|ref|YP_002817369.1| threonyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|228917215|ref|ZP_04080772.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929623|ref|ZP_04092641.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935883|ref|ZP_04098693.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948301|ref|ZP_04110584.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093673|ref|ZP_04224773.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|229124142|ref|ZP_04253334.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201] gi|229186832|ref|ZP_04313987.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|229601552|ref|YP_002868855.1| threonine--tRNA ligase [Bacillus anthracis str. A0248] gi|254686931|ref|ZP_05150789.1| threonyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254720893|ref|ZP_05182684.1| threonyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254736684|ref|ZP_05194390.1| threonyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254741722|ref|ZP_05199409.1| threonyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254754681|ref|ZP_05206716.1| threonyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254757513|ref|ZP_05209540.1| threonyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|30259321|gb|AAP28509.1| threonine--tRNA ligase [Bacillus anthracis str. Ames] gi|47505265|gb|AAT33941.1| threonyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181394|gb|AAT56770.1| threonyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|49333256|gb|AAT63902.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974404|gb|AAU15954.1| threonine--tRNA ligase (threonyl-tRNA synthetase) [Bacillus cereus E33L] gi|164712752|gb|EDR18282.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167509956|gb|EDR85379.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167527843|gb|EDR90677.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170126388|gb|EDS95277.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170666324|gb|EDT17113.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172081663|gb|EDT66734.1| threonyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|196026805|gb|EDX65442.1| threonine--tRNA ligase [Bacillus cereus NVH0597-99] gi|218536622|gb|ACK89020.1| threonyl-tRNA synthetase [Bacillus cereus AH820] gi|225787158|gb|ACO27375.1| threonine--tRNA ligase [Bacillus cereus 03BB102] gi|227005330|gb|ACP15073.1| threonine--tRNA ligase [Bacillus anthracis str. CDC 684] gi|228596569|gb|EEK54234.1| Threonyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|228659444|gb|EEL15092.1| Threonyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228689760|gb|EEL43567.1| Threonyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228811288|gb|EEM57626.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823651|gb|EEM69473.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830010|gb|EEM75629.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842416|gb|EEM87507.1| Threonyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265960|gb|ACQ47597.1| threonine--tRNA ligase [Bacillus anthracis str. A0248] Length = 645 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKE 453 >gi|238484021|ref|XP_002373249.1| threonyl-tRNA synthetase [Aspergillus flavus NRRL3357] gi|220701299|gb|EED57637.1| threonyl-tRNA synthetase [Aspergillus flavus NRRL3357] Length = 526 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 23/177 (12%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL------------ 236 ++G+ EV P + + +G + DDM+ + T + Sbjct: 105 QYGFREVLTPTIYKRSLWEVSGHWQNYKDDMYEVRGRGAMGETEGEAGEDESYGLKPMNC 164 Query: 237 ---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 L+ + + LP+R+ +P R+E + G+ R +F + + R + Sbjct: 165 PGHCLLFKSQNHSYRELPIRYADFSPLHRNEVSGSLS---GLTRVRRFHQDDGHIFCRPQ 221 Query: 294 DSFTEHERMLSCAEEILKRLDL-HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 +E L + ++ L YR+V + F LE+W + ++ RE Sbjct: 222 QIKSEIASALGFVDMVMTTFGLGPYRLVLSTRPEKDFIG----SLELWDSAESQLRE 274 >gi|92117217|ref|YP_576946.1| threonyl-tRNA synthetase [Nitrobacter hamburgensis X14] gi|91800111|gb|ABE62486.1| Ser-tRNA(Thr) hydrolase [Nitrobacter hamburgensis X14] Length = 681 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 98/318 (30%), Gaps = 30/318 (9%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDI-------RARRNSNSAQIGQAIAEGNLSLVDAL 73 R+ E ++++K R +I + + R + G+A + LVDA+ Sbjct: 133 RNEPFSLEDFPAIEKKMREIIAR-DKPFTKDVWDREKTKQVFRDKGEAFK---VELVDAI 188 Query: 74 -KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 +E + Q + +S K+ + + + +N +L R G Sbjct: 189 PGDEPIKIYYQGDWFDLCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAF 248 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS---- 188 ++ + + E D R + G A G + + Sbjct: 249 ASQQDLDAYLKQIEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTLFQEIIAYMRR 308 Query: 189 --EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEVSLT 237 Y EV+AP ++ +G + ++MF + P + Sbjct: 309 RLAEDYDEVNAPQMLDKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHV 368 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 ++ H + + LP+R R E A G++R F + + E+ Sbjct: 369 LIFKHGLKSYRELPIRLAEFGVVHRYEPSGA---MHGLMRVRGFTQDDAHIFCTEQQLAD 425 Query: 298 EHERMLSCAEEILKRLDL 315 E ++ + Sbjct: 426 ECLKINDLILSTYEDFGF 443 >gi|169767186|ref|XP_001818064.1| threonyl-tRNA synthetase [Aspergillus oryzae RIB40] gi|83765919|dbj|BAE56062.1| unnamed protein product [Aspergillus oryzae] Length = 526 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 23/177 (12%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL------------ 236 ++G+ EV P + + +G + DDM+ + T + Sbjct: 105 QYGFREVLTPTIYKRSLWEVSGHWQNYKDDMYEVRGRGAMGETEGEAGEDESYGLKPMNC 164 Query: 237 ---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 L+ + + LP+R+ +P R+E + G+ R +F + + R + Sbjct: 165 PGHCLLFKSQNHSYRELPIRYADFSPLHRNEVSGSLS---GLTRVRRFHQDDGHIFCRPQ 221 Query: 294 DSFTEHERMLSCAEEILKRLDL-HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 +E L + ++ L YR+V + F LE+W + ++ RE Sbjct: 222 QIKSEIASALGFVDMVMTTFGLGPYRLVLSTRPEKDFIG----SLELWDSAESQLRE 274 >gi|195375658|ref|XP_002046617.1| GJ12980 [Drosophila virilis] gi|194153775|gb|EDW68959.1| GJ12980 [Drosophila virilis] Length = 464 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 109/307 (35%), Gaps = 61/307 (19%) Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K + + + + E G ++S P+L + TG++ Sbjct: 40 KSGSNGTYQIMPIAQRVVDKCISL-VQRNMQEAGGQKISLPVLTPAQLWKKTGRLEGDIS 98 Query: 218 DMFCTTDGRW----LIPTSEVSLTNLYSHE-IIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + + D + PT E ++T + + I + LPLR + P FR E S Sbjct: 99 EFYMVRDRSGKQFLMSPTHEEAVTAMLATAAPISYRQLPLRLYQIGPKFRDELKSRF--- 155 Query: 273 RGMLRQHQFWKCELVSIT-REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 G++R +F ++ + +E + + + E ++L++ + V TG +G S Sbjct: 156 -GLMRAKEFLMKDMYTFDVSKEAAECTYATVSDAYERFFRQLEVPFVKVEAATGIMGGSL 214 Query: 332 CKTYDLEVWLAGQNLYREISSC----------------STCGNFQSRRMNSRYRDPNSKS 375 Y + G++ S+C STC + QS +++ R R Sbjct: 215 SHEY-HYISPVGEDTLLNCSACGYAGNAEVLGSDAETASTCPSCQSTQLS-RVRG----- 267 Query: 376 LKFTHT---------------LNGS-----------GVAVGRCLIAILENYLNADGSVTI 409 ++ HT LN S GV + R + A LE + Sbjct: 268 VEVAHTFLLGDKYSKPLGATFLNKSGKPETLQMGCYGVGITRVIAAALEVLSTEQ-ELRW 326 Query: 410 PTVLRPY 416 P +L PY Sbjct: 327 PKLLAPY 333 >gi|157363113|ref|YP_001469880.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO] gi|166980167|sp|A8F3T2|SYP_THELT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157313717|gb|ABV32816.1| prolyl-tRNA synthetase [Thermotoga lettingae TMO] Length = 575 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 74/199 (37%), Gaps = 14/199 (7%) Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESK 248 EVS P++ E TG+ + +M L PT E T++ E+ K Sbjct: 67 QEVSMPVIQPAELWKTTGRWDDYGPEMMKLKDRHERDFTLGPTHEEVFTHMVKDELRSYK 126 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC-AE 307 LPL + P +R E R G+LR +F + S + S E Sbjct: 127 QLPLFLYQIGPKYRDEI----RPRFGLLRAREFIMKDGYSFHDSDQSLNETYEACKNAYR 182 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN--LYREISSCSTCGNFQSRRMN 365 +I +++ L Y ++ +G +G + + + N + S + Q+ Sbjct: 183 KITEKIGLKYIIIEAASGAIGGNESHEFVSFAPVGETNLLKCEKCGYSSN--DEQAPYRG 240 Query: 366 SRYRDPN-SKSLKFTHTLN 383 +RD K ++ HT N Sbjct: 241 KYHRDEEIEKPVELIHTPN 259 >gi|88809590|ref|ZP_01125097.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805] gi|88786340|gb|EAR17500.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7805] Length = 611 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 54/171 (31%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D +GA A + + F H E GY + P + Sbjct: 215 KDLDLFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAH-FEGGYELLYTPHVADISLWKT 273 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLPLRFTTLAPSFRSE 264 +G + +A+ MF + + ++ + LP+R+ L +R E Sbjct: 274 SGHLDFYAESMFGPMQVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE 333 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E ++L E IL D Sbjct: 334 RPG---VMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERILSTFDF 381 >gi|315231555|ref|YP_004071991.1| phosphoserine phosphatase [Thermococcus barophilus MP] gi|315184583|gb|ADT84768.1| phosphoserine phosphatase [Thermococcus barophilus MP] Length = 313 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 67/197 (34%), Gaps = 5/197 (2%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 I +L+++ R + K+E+++ N I + + V L+ + K++ + Sbjct: 29 EIEALEKEKREIQAKLEELQKELN-----IWIQKRDEKNNEVKQLRQKAREYKQKRDEVN 83 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 K+ E+ + + + + + + E + T +E +R + I + E Sbjct: 84 KQIQELKKNREDINAKLDLLYQEILEYRTKRDEYNQLRRLRMPKEKIEERIDKLEWELQT 143 Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 K + VL L +++A T + + A + E Sbjct: 144 NPNITPEREKQIVDQIQVLATELEIIQQAERFHQKLQETRKKVESLKKARRAISLEIQKL 203 Query: 209 TGQIPKFADDMFCTTDG 225 Q +F + M Sbjct: 204 ANQSQQFHEQMIKAYQQ 220 >gi|301056082|ref|YP_003794293.1| threonyl-tRNA synthetase [Bacillus anthracis CI] gi|300378251|gb|ADK07155.1| threonyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 645 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 234 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 293 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 294 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 353 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 354 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 410 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 411 LEVYKDFGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKE 453 >gi|238855713|ref|ZP_04646009.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260665499|ref|ZP_05866346.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|282934764|ref|ZP_06340004.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] gi|313471817|ref|ZP_07812309.1| threonine--tRNA ligase [Lactobacillus jensenii 1153] gi|238831659|gb|EEQ24000.1| threonine--tRNA ligase [Lactobacillus jensenii 269-3] gi|239528573|gb|EEQ67574.1| threonine--tRNA ligase [Lactobacillus jensenii 1153] gi|260560767|gb|EEX26744.1| threonyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|281301175|gb|EFA93479.1| threonine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 643 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 100/329 (30%), Gaps = 42/329 (12%) Query: 53 SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 I + I G ++ + + S L+ Q + + S ++ + ++ Sbjct: 120 ELEKAIAKLIKNGQA--IEPVMVKKSELEAQFKNDPFKMELLKSEGDEVAAFKMGDFVDF 177 Query: 113 VPIGTSANENILIRSVG-------KKPSAIHLSREHFEIGEALGLMDFDRATK------- 158 N + + + + + D + K Sbjct: 178 GFAALLPNSGKVKHFKLLSVAGAYWQGKSSNPMLQRLFGTAFFKEADLEADLKRRAEIKE 237 Query: 159 -----------------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLV 201 GA A + R + +++ID ++ GY V P+L+ Sbjct: 238 RDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKELAD-GYQHVYTPVLM 296 Query: 202 RDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 +A +G + +DMF D L P + S +Y H I + LP+R Sbjct: 297 NLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRELPIRIAE 356 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 L R E A G+ R + + + E E ++L ++ K D+ Sbjct: 357 LGMMHRYEKSGALS---GLQRVREMTLNDGHTFVALEQVQEEFAKILKLIMDVYKDFDIT 413 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 L D + + E+W Q Sbjct: 414 DYYFRLSYRDPKNTDKYFANDEMWERSQK 442 >gi|118479724|ref|YP_896875.1| threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|118418949|gb|ABK87368.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] Length = 646 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 15/223 (6%) Query: 139 REHFEIGEALGLMDFDR---ATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG--- 191 EH + E D + KL V G L + A + +I+ + + Sbjct: 235 DEHLRMLEEAKERDHRKLGKELKLFTNSQKVGQGLPLWLPKGATIRRIIERYIVDKEASL 294 Query: 192 -YTEVSAPLLVRDEAMYGTGQIPKFAD----DMFCTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P+L E +G + D M + L P + +Y ++I Sbjct: 295 GYDHVYTPVLGSRELYETSGHWNHYRDGMFPSMEMDNEELVLRPMNCPHHMMVYKNDIHS 354 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R+++ Sbjct: 355 YRELPIRIAELGTMHRYEMSGALS---GLQRVRGMTLNDAHIFVRPDQIKEELKRVVNLT 411 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E+ K L L D + D E+W Q + +E Sbjct: 412 LEVYKDFGLENYSFRLSYRDPEDTKKYYADDEMWEKAQGMLKE 454 >gi|313115472|ref|ZP_07800937.1| glycyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622182|gb|EFQ05672.1| glycyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 473 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 12/151 (7%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + + LP + +FR+E R +F + E Sbjct: 173 TAQGIFVNFANIQRTTRRKLPFGVCQVGKAFRNEI----TPGNFTFRTREFEQMECEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + E L L + H R+ +L F + T D+E + + Sbjct: 229 KPGTDLEWFAYWKDYCENWLLSLGIKKEHLRLRDHEPAELAFYSRATTDIEYAFPFTD-W 287 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 E+ + N+ +R+++ + KSL++ Sbjct: 288 GELWGIADRTNY----ALTRHQEASGKSLEY 314 >gi|291543417|emb|CBL16526.1| prolyl-tRNA synthetase [Ruminococcus sp. 18P13] Length = 485 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 90/285 (31%), Gaps = 20/285 (7%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 + ++ + + + ++ A+ Q ++D G+ V P Sbjct: 14 MDEDFAQWYTDIVKKAELIEYTSVKGCMVIRPYAYAIWENIQHILDGMFKATGHENVCMP 73 Query: 199 LLVRDEAMYGTGQIPK--FADDMFCTT-------DGRWLIPTSEVSLTNLYSHEIIESKS 249 + + + + + + + T D + PTSE Y++ + + Sbjct: 74 MFIPESLLQKEKDHVEGFAPEVAWVTMGGSEKLEDRLCVRPTSETLFCEHYANIVHSYRD 133 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV--SITREEDSFTEHERMLSCAE 307 LP + R E + TR LR +F E T +E + A+ Sbjct: 134 LPKLYNQWVSVVRWE-----KTTRPFLRSREFLWQEGHTIHATAQEAIEETERMLNVYAD 188 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 L + D A TY +E + + + G+ ++ + Sbjct: 189 FCEHSLAMPVIKGRKTESDKFAGAVATYAIEALM-HDGKALQAGTSHYFGDGFAKAFDIE 247 Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 Y D +K + T S R + AI+ + + G V P V Sbjct: 248 YTDKENKRVNPHQT---SWGVTTRLIGAIIMTHGDNSGLVLPPAV 289 >gi|320159528|ref|YP_004172752.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319993381|dbj|BAJ62152.1| threonyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 623 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 58/166 (34%), Gaps = 8/166 (4%) Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH----E 243 ++GY V P L +++ +G +P +A+ M+ + + + ++ + Sbjct: 265 FKYGYERVRTPHLAKEDLYLRSGHLPYYAESMYPPMELEGVRYYVKPMNCPMHHKIFASK 324 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + LP+R +R E + G++R + EE E ++ Sbjct: 325 PRSYRELPVRLAEYGTCYRYEKSG---ELFGLMRVRSMQMNDSHIYCSEEQFEQEFVGVI 381 Query: 304 SCAEEILKRLDLH-YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 E + + Y + G + E+W +++ R Sbjct: 382 HLYLEYFRLFGIQDYLMRLSTHHPRGLGKKYVNNPELWRKTEDMVR 427 >gi|282881717|ref|ZP_06290380.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] gi|281304476|gb|EFA96573.1| threonine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] Length = 655 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 9/174 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLT 237 Q M+ +GY EV P + +G + D + Sbjct: 279 LQDMLRNIQRRYGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMN 338 Query: 238 NLYS-----HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + ++ K LPLR +R E + G+ R F + + R Sbjct: 339 CPHHCEVFAYKPRSYKDLPLRIAEFGTVYRYEKSG---ELHGLTRVRSFTQDDAHIFCRP 395 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + E R++ + + K + + D EVW + Sbjct: 396 DQVKNEFLRVMDIIQAVFKIFNFDNFEAQISLRDPKDKEKYIGSDEVWAESEQA 449 >gi|319783887|ref|YP_004143363.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169775|gb|ADV13313.1| threonyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 658 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 93/323 (28%), Gaps = 39/323 (12%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNS-NSAQI---GQAIA----EGNLSLVD- 71 R+ + +++K R +I RN + ++ +A +G ++ Sbjct: 111 RNEPFTPDDFPVIEKKMREIIS--------RNKPFTKEVWSRDKAKKVFADKGERYKLEL 162 Query: 72 -ALKNETSTLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 E LK Q + +S ++ + + + +N +L R Sbjct: 163 IDAIPEDQDLKIYAQGDWFDLCRGPHMASTGQIGNAFKLMKVAGAYWRGDSNNPMLTRIY 222 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ-------F 181 G + + + E D + + G A G Sbjct: 223 GTAWADQAQLEAYQTMLEEAEKRDHRKIGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVN 282 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTS 232 + E GY EV+AP ++ +G + D MF L P + Sbjct: 283 YMRRRLDEQGYQEVNAPQVLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMN 342 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 ++ H + + LP++ R E A G++R F + + E Sbjct: 343 CPGHVQIFKHGLKSYRDLPVKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTE 399 Query: 293 EDSFTEHERMLSCAEEILKRLDL 315 E E R+ Sbjct: 400 EQLAAECLRINDLILSTYADFGF 422 >gi|260463880|ref|ZP_05812076.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] gi|259030255|gb|EEW31535.1| threonyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] Length = 658 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 90/318 (28%), Gaps = 29/318 (9%) Query: 21 RHLEPQSEYILSLDEKNRILIKK-----IEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 R+ + +++K R +I + E + + ++ E + Sbjct: 111 RNEPFTPDDFPVIEKKMREIIARNKPFTKEVWSREQ---AKKVFADKGERYKLELIDAIP 167 Query: 76 ETSTLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 E LK Q + +S ++ + + + +N +L R G + Sbjct: 168 EDQDLKIYAQGDWFDLCRGPHMASTGQIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAWA 227 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ-------FMIDLH 186 + + E D + + G A G + Sbjct: 228 DQAQLDAYQTMLEEAEKRDHRKLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVNYMRRR 287 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLT 237 E GY EV+AP ++ +G + D MF L P + Sbjct: 288 LDEQGYQEVNAPQVLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMNCPGHV 347 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 ++ H + + LP++ R E A G++R F + + EE Sbjct: 348 QIFKHGLKSYRDLPVKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTEEQLAA 404 Query: 298 EHERMLSCAEEILKRLDL 315 E R+ Sbjct: 405 ECLRINDLILSTYADFGF 422 >gi|284037110|ref|YP_003387040.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74] gi|283816403|gb|ADB38241.1| threonyl-tRNA synthetase [Spirosoma linguale DSM 74] Length = 647 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 49/160 (30%), Gaps = 13/160 (8%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSE---VSLTNLYSHEII 245 GY+ V P + + +G K+ +D F R P E + + EI Sbjct: 293 RAGYSPVVTPHIGSKQLYVTSGHWEKYGEDSFQ--PIRTPDPNEEFLLKPMNCPHHCEIY 350 Query: 246 -----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 + LPLR +R E + G+ R F + + R + E Sbjct: 351 KTKPRSYRDLPLRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCRPDQVKEEFM 407 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 +++ + L + D ++W Sbjct: 408 KVIDLVLYVFNTLGFSDYSAQISLRDPENKTKYIGSDDLW 447 >gi|42519522|ref|NP_965452.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|73919800|sp|Q74IC0|SYT_LACJO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|41583811|gb|AAS09418.1| threonyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] Length = 643 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 68/386 (17%), Positives = 125/386 (32%), Gaps = 56/386 (14%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP------QSEY---ILSLDEKNRILIKKIEDIRARRN 52 LDI +R L A+ KR +++ + D++++I + ++ D+ Sbjct: 69 LDI--LRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPDLE---- 122 Query: 53 SNSAQIGQAIAEGNLSLVDALKN-------ETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 + +AI G ++K + K L E++E V + Sbjct: 123 ---KAMQKAIKNGEKIEYTSMKKSELEEIFKDDQFKLDLLKDEEDEVAVYKLGDFVDFGF 179 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL------ 159 + I ++ K S L R +D D + Sbjct: 180 DALLPNTGKIKNFKLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKERD 239 Query: 160 ----------------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRD 203 GA A + R + ++++D ++ GY V P+L+ Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVAD-GYEHVYTPVLMNV 298 Query: 204 EAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +A +G + DDMF D L P + S +Y H I + LP+R L Sbjct: 299 DAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELG 358 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R E A G+ R + + + + E ++L ++ K D+ Sbjct: 359 MMHRYEKSGALS---GLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDY 415 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQ 344 L D + + E+W Q Sbjct: 416 YFRLSYRDPKNTDKYYANDEMWETSQ 441 >gi|218282283|ref|ZP_03488582.1| hypothetical protein EUBIFOR_01164 [Eubacterium biforme DSM 3989] gi|218216751|gb|EEC90289.1| hypothetical protein EUBIFOR_01164 [Eubacterium biforme DSM 3989] Length = 476 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 72/203 (35%), Gaps = 23/203 (11%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 188 TAQGIFVNFKNVQRTMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 243 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + E + LK L ++ + L D L + T D+E + + Sbjct: 244 KPGTDLDWFEYYCKNCVQFLKDLGINEENIRLRAHDPEELAHYSNGTSDIEYHFSEPIGW 303 Query: 348 REISSCSTCGNFQSR------RMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL-ENY 400 E+ + +F + + N Y D + + + S V V R ++A++ E Y Sbjct: 304 GELWGIADRTDFDLKAHQTTSKQNLEYFDQEANEKYIPYVIEPS-VGVERLMLAVMCEAY 362 Query: 401 LNA----DGSVTI---PTVLRPY 416 D V + P L PY Sbjct: 363 QEEQLENDSRVVLKLHP-ALAPY 384 >gi|284165449|ref|YP_003403728.1| Seryl-tRNA synthetase, class IIa-like protein [Haloterrigena turkmenica DSM 5511] gi|284015104|gb|ADB61055.1| Seryl-tRNA synthetase, class IIa-like protein [Haloterrigena turkmenica DSM 5511] Length = 352 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 10/108 (9%) Query: 7 IRQNPEHLDIALKKRHLEPQ-SEYILSLDEK---NRILIKKIEDIRARRNSNSAQIGQAI 62 +R+ + + RH+ P+ + L D++ R ++ D+R R+N + Q+ Sbjct: 115 LRKRRDEVA-----RHVGPELVDECLRFDDELCARRQ-ESQLRDLRERKNRLARQVANRK 168 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + V L + T+KE+L E + +L+ I Sbjct: 169 RTDPNADVADLIARSETVKEELAAAETACRRLRRQRDQLLVDIGASLD 216 >gi|148242044|ref|YP_001227201.1| threonyl-tRNA synthetase [Synechococcus sp. RCC307] gi|147850354|emb|CAK27848.1| Threonyl-tRNA synthetase [Synechococcus sp. RCC307] Length = 609 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 52/168 (30%), Gaps = 8/168 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +GA A + + F + H GY + P + + +G Sbjct: 215 DLFSIEDEAGAGLVFWHPRGARMRLLIEDFWREAH-FAGGYELLYTPHVADIDLWKTSGH 273 Query: 212 IPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLPLRFTTLAPSFRSEAGS 267 + + + MF + + + K LP+R+ L +R E Sbjct: 274 LDFYRESMFGPMTVDEREYQLKPMNCPFHVLTYASTLRSYKELPIRWAELGTVYRYERPG 333 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E ++L E IL D Sbjct: 334 ---VMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTETILSTFDF 378 >gi|258647088|ref|ZP_05734557.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259] gi|260853035|gb|EEX72904.1| threonine--tRNA ligase [Prevotella tannerae ATCC 51259] Length = 647 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 96/349 (27%), Gaps = 29/349 (8%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + ++ K L++K E + R S S E + + L Sbjct: 111 GVTITEADFAKIENKMHELVQKKEPL--VRKSISKTDALNFFEQHGQHYKN--ELIADLA 166 Query: 82 EQLPILEKEEHEVCSSLKKLISC------IPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 + + + + I + + + R G Sbjct: 167 DGTITTYTQGNYTDLCRGPHLLNTAPIKAIKVMAVSSAYWRGDEKRPQMTRVYGVSFPKK 226 Query: 136 HLSREHFEIGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLH 186 + E+ ++ E D + + L G + L + L F+ + Sbjct: 227 KMLDEYLQLLEEAKRRDHRKIGREMELFMFSELVGKGLPIWLPKGTVLRQQLMSFLRKIQ 286 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLY 240 GY EV P + +G K+ D F L P + +Y Sbjct: 287 -KRFGYMEVITPHIGSKNLYVTSGHYAKYGKDSFQAIHTPEEGEEYMLKPMNCPHHCAVY 345 Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300 S + K LPLR +R E + G+ R F + + R + E Sbjct: 346 SWQPHSYKDLPLRIAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCRPDQVKQEFL 402 Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 R++ + + L+ + D +VW + E Sbjct: 403 RVMDIIMIVFRALNFEQFEAQISLRDKVKREKYIGSDDVWDKAEQAIIE 451 >gi|242774039|ref|XP_002478362.1| threonyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] gi|218721981|gb|EED21399.1| threonyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] Length = 532 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------------DGRWLIP 230 ++G+ EV P + + +G + DDM+ + L P Sbjct: 119 QYRQYGFREVLTPNIYKKSLWEISGHWQNYKDDMYEVRGRGATGETEGELGEDEQYGLKP 178 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + L+ + + LP+R+ +P R+E + G+ R +F + + Sbjct: 179 MNCPGHCLLFKSQNHSYRDLPVRYADFSPLHRNEISGSLS---GLTRVRRFHQDDGHIFC 235 Query: 291 REEDSFTEHERMLSCAEEILKRLDLH 316 R + E + L+ ++K L Sbjct: 236 RPQQIGKEIDLALAFVNMVMKTFGLP 261 >gi|326800360|ref|YP_004318179.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21] gi|326551124|gb|ADZ79509.1| threonyl-tRNA synthetase [Sphingobacterium sp. 21] Length = 641 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 49/166 (29%), Gaps = 9/166 (5%) Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLY 240 + + GY V P + +G K+ AD + + + Sbjct: 280 FLQRAQMKAGYEPVVTPHIGHKNLYVTSGHYEKYGADSFQPIRTPQEGEEFLLKPMNCPH 339 Query: 241 SHEII-----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 EI K LP+RF +R E + G+ R F + + R + Sbjct: 340 HCEIYKTKPRSYKDLPVRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCRPDQV 396 Query: 296 FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 E ++++ + K L + D E WL Sbjct: 397 KDEFKKVIDLVLYVFKALGFDDYTAQISLRDPENKGKYIGSEENWL 442 >gi|291564005|emb|CBL42821.1| prolyl-tRNA synthetase, family I [butyrate-producing bacterium SS3/4] Length = 477 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 70/196 (35%), Gaps = 11/196 (5%) Query: 219 MFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + + + PTSE + Y +I + LP + R E + TR LR Sbjct: 103 LEPLQERLCVRPTSETLFCDFYQKDIHSYRDLPKVYNQWCSVVRWE-----KTTRPFLRS 157 Query: 279 HQFWKCELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 +F E T EE + + A+ L + + A TY Sbjct: 158 REFLWQEGHTAHATAEEAQERTIQMLNLYADFCEDFLAIPVVRGQKTDKEKFAGAEATYT 217 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAI 396 +E + + + G+ ++ +Y D +++ LK+ H S R + AI Sbjct: 218 IESLM-HDGKALQSGTSHNFGDGFAKAFGIQYSDKDNQ-LKYVHQT--SWGMTTRMIGAI 273 Query: 397 LENYLNADGSVTIPTV 412 + + + +G V P V Sbjct: 274 IMVHGDNEGLVLPPNV 289 >gi|13471046|ref|NP_102615.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099] gi|22654133|sp|Q98LR2|SYT_RHILO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|14021790|dbj|BAB48401.1| threonyl-tRNA synthetase [Mesorhizobium loti MAFF303099] Length = 658 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 94/323 (29%), Gaps = 39/323 (12%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNS-NSAQI---GQAIA----EGNLSLVD- 71 R+ + +++K R +I RN + ++ +A +G ++ Sbjct: 111 RNEPFTPDDFPVIEKKMREIIA--------RNKPFTKEVWSRDKAKKVFADKGERYKLEL 162 Query: 72 -ALKNETSTLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 E LK Q + +S ++ + + + +N +L R Sbjct: 163 IDAIPEDQDLKIYAQGDWFDLCRGPHMASTGQIGNAFKLMKVAGAYWRGDSNNPMLTRIY 222 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ-------F 181 G + + + E D + + G A G Sbjct: 223 GTAWADQAQLEAYQTMLEEAEKRDHRKLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVN 282 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------TDGRWLIPTS 232 + E GY EV+AP ++ +G + D MF L P + Sbjct: 283 YMRRRLDEQGYQEVNAPQVLDKSLWETSGHWGWYRDAMFKVTVAGDDTDDDRVFALKPMN 342 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 ++ H + + LP++ R E A G++R F + + E Sbjct: 343 CPGHVQIFKHGLKSYRDLPVKLAEFGNVHRYEPSGALH---GLMRVRGFTQDDAHIFCTE 399 Query: 293 EDSFTEHERMLSCAEEILKRLDL 315 E +E R+ Sbjct: 400 EQLASECLRINDLILSTYADFGF 422 >gi|227889526|ref|ZP_04007331.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] gi|227850004|gb|EEJ60090.1| threonyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] Length = 643 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 67/386 (17%), Positives = 125/386 (32%), Gaps = 56/386 (14%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP------QSEY---ILSLDEKNRILIKKIEDIRARRN 52 LDI +R L A+ KR +++ + D++++I + ++ ++ Sbjct: 69 LDI--LRATAAFLLEAVAKRKYPELRLGMHEADEGGFFVDTDKEDQIKVTELPELE---- 122 Query: 53 SNSAQIGQAIAEGNLSLVDALKN-------ETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 + +AI G ++K + K L E++E V + Sbjct: 123 ---KAMQKAIKNGEKIEYTSMKKSELEEIFKDDQFKLDLLKDEEDEVAVYKLGDFVDFGF 179 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL------ 159 + I ++ K S L R +D D + Sbjct: 180 DALLPNTGKIKNFKLLSVAGAYWLGKSSNPMLQRIFGTAFFKKAALDEDLKRRAEIKERD 239 Query: 160 ----------------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRD 203 GA A + R + ++++D ++ GY V P+L+ Sbjct: 240 HRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIVDKEVAD-GYEHVYTPVLMNV 298 Query: 204 EAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 +A +G + DDMF D L P + S +Y H I + LP+R L Sbjct: 299 DAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELG 358 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R E A G+ R + + + + E ++L ++ K D+ Sbjct: 359 MMHRYEKSGALS---GLQRVREMTLNDGHTFVALDQIREEFAKVLKLIMDVYKDFDITDY 415 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQ 344 L D + + E+W Q Sbjct: 416 YFRLSYRDPKNTDKYYANDEMWERSQ 441 >gi|295109520|emb|CBL23473.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus obeum A2-162] Length = 653 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 10/167 (5%) Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 + G ++ + + + L +++ D T + GY PL+ + + +G Sbjct: 252 TTVDVIGQGLPLIMPNGVIMMQELQRWIEDEET-KRGYVRTKTPLMAKSDLYKISGHWDH 310 Query: 215 FADDMFCTTDGRWLIPT-SEVSLTNLYSH-----EIIESKSLPLRFTTLAPSFRSEAGSA 268 + D MF D + +T + + E + LPLR+ + FR+E Sbjct: 311 YKDGMFVLGDEENDKEVFALRPMTCPFQYYVYKAEQHSYRDLPLRYGETSTLFRNEDSG- 369 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + G+ R QF E I R + E + ++ A+ L+ L + Sbjct: 370 --EMHGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLQVLGV 414 >gi|333029961|ref|ZP_08458022.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] gi|332740558|gb|EGJ71040.1| threonyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] Length = 647 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 45/167 (26%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYS-----H 242 E GY +V P + +G K+ D + + Sbjct: 288 EFGYEQVITPHIGNKLLYVTSGHYAKYGKDSFQPIHTPEEGEEYLLKPMNCPHHCEIYKW 347 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + LPLR +R E + G+ R F + + R + E + Sbjct: 348 TPRSYRELPLRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCRPDQVKEEFLSV 404 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + I K L+ + D E W +N E Sbjct: 405 MDIIFIIFKALNFENFEAQISLRDPVNREKYIGSDENWEKAENAIVE 451 >gi|212531825|ref|XP_002146069.1| threonyl-tRNA synthetase [Penicillium marneffei ATCC 18224] gi|210071433|gb|EEA25522.1| threonyl-tRNA synthetase [Penicillium marneffei ATCC 18224] Length = 541 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 18/146 (12%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------------DGRWLIP 230 ++G+ EV P + + +G + DDM+ + L P Sbjct: 114 QYRQYGFREVLTPNIYKKSLWEISGHWQNYKDDMYEVRGRGATGETEGELGEDEQYGLKP 173 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + L+ + + LP+R+ +P R+E + G+ R +F + + Sbjct: 174 MNCPGHCLLFKSQNHSYRDLPVRYADFSPLHRNEISGSLS---GLTRVRRFHQDDGHIFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLH 316 R + E + L+ ++K L Sbjct: 231 RPQQIGKEIDLALTFVNMVMKTFGLP 256 >gi|148642753|ref|YP_001273266.1| DNA repair ATPase SbcC [Methanobrevibacter smithii ATCC 35061] gi|148551770|gb|ABQ86898.1| ATPase involved in DNA repair, SbcC [Methanobrevibacter smithii ATCC 35061] Length = 658 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 42/140 (30%), Gaps = 5/140 (3%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA-----EGNLSLVDALKNETS 78 E E + + +++ K IED+R R S SA I + S L+ E Sbjct: 428 EFDIEDVREYERQSQKNKKIIEDLRKRNKSLSADINTLKKDIEKLKRKRSEAGELEGELK 487 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 L ++ E+ + + I ++ ++ + + Sbjct: 488 ILNNKIKFCEEAITILSDLNNNVQKHIREKVNDKTRKQFTSINWAYDKYRDVTIKDDYKI 547 Query: 139 REHFEIGEALGLMDFDRATK 158 G+ + D + Sbjct: 548 VITKSTGQKITPGDLSDGEE 567 >gi|67517326|ref|XP_658540.1| hypothetical protein AN0936.2 [Aspergillus nidulans FGSC A4] gi|40746809|gb|EAA65965.1| hypothetical protein AN0936.2 [Aspergillus nidulans FGSC A4] gi|259488776|tpe|CBF88493.1| TPA: threonyl-tRNA synthetase (AFU_orthologue; AFUA_1G16210) [Aspergillus nidulans FGSC A4] Length = 523 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 23/177 (12%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---------------TDGRWLIPTSE 233 ++G+ EV P + + +G + DDM+ + L P + Sbjct: 103 QYGFREVLTPTIYKQSLWEVSGHWQNYKDDMYEVRGRGAMGDTEGEAGENESYGLKPMNC 162 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 L+ + + LP+R+ +P R+E + G+ R +F + + R + Sbjct: 163 PGHCLLFKSQNHSYRELPIRYADFSPLHRNEISGSLS---GLTRVRRFHQDDGHIFCRPQ 219 Query: 294 DSFTEHERMLSCAEEILKRLDL-HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E + L + ++ L YR+V + F DL++W + + RE Sbjct: 220 QIKGEIKSALGFVDLVMTTFGLGPYRLVLSTRPEKDFIG----DLQLWDSAEAQLRE 272 >gi|332878705|ref|ZP_08446422.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683342|gb|EGJ56222.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 647 Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 48/164 (29%), Gaps = 9/164 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSH 242 E GY +V P + +G K+ D F + L P + +Y+ Sbjct: 286 EAGYEQVVTPHIGHKNLYVTSGHWDKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNS 345 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LP RF +R E + G+ R F + + E E + + Sbjct: 346 HPWSYKDLPKRFAEFGTVYRYEQSG---ELHGLTRVRCFTQDDAHIFCTPEQLDAEFKHV 402 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + L + D E W +N Sbjct: 403 IDLVLYVFGSLGFDNFTAQVSLRDPDNPTKYIGTDENWAKAENA 446 >gi|317054829|ref|YP_004103296.1| prolyl-tRNA synthetase [Ruminococcus albus 7] gi|315447098|gb|ADU20662.1| prolyl-tRNA synthetase [Ruminococcus albus 7] Length = 480 Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 92/265 (34%), Gaps = 22/265 (8%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK-FADD 218 + + ++ + Q ++D G+ V P+ + + + + FA + Sbjct: 35 TSVKGCMVIRPYGYAIWENIQKILDSRFKALGHENVCMPMFIPESLLQKEKDHVEGFAPE 94 Query: 219 MFCTTD--------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 + T + PTSE Y++ + + LP + R E + Sbjct: 95 VAWVTHGGSEKLEDRLCVRPTSETLFCEHYANIVHSYRDLPKLYNQWVSVVRWE-----K 149 Query: 271 DTRGMLRQHQFWKCELVSI--TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 TR LR +F E +I T EE + A+ K L + D Sbjct: 150 TTRPFLRSREFLWQEGHTIHETPEEAIEETERMLNCYADFCEKDLAMPVVKGRKTDSDKF 209 Query: 329 FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH-TLNGSGV 387 A TY +E + + + G+ ++ ++ ++K L F H T S Sbjct: 210 AGAEATYAIEALM-HDGKALQAGTSHYFGDGFAKAFGIQFTGRDNK-LAFPHQT---SWG 264 Query: 388 AVGRCLIAILENYLNADGSVTIPTV 412 R + AI+ + + +G V P V Sbjct: 265 VTTRLIGAIIMTHGDDNGLVLPPAV 289 >gi|322789622|gb|EFZ14837.1| hypothetical protein SINV_80100 [Solenopsis invicta] Length = 57 Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%) Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 R HQF K E+ + S + + + E++ L LH+R++ + DLG A + Sbjct: 1 RVHQFTKVEMFICSEPNQSEDVFQDLQNIQEKLFSSLGLHFRIMDMPPLDLGSPAYR 57 >gi|291398043|ref|XP_002715638.1| PREDICTED: threonyl-tRNA synthetase 2, mitochondrial [Oryctolagus cuniculus] Length = 718 Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 58/211 (27%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNALVAFIRAEYAH-RGFSEVKTPTLFSTKLWEKSGHWEHYKEDMF 376 Query: 221 CTTD---GRWLIPTSEVSL-----------------TNLYSHEIIESKSLPLRFTTLAPS 260 S+ +++H + LPLR Sbjct: 377 ALQPSDSDSSACSQSDHPTSQPPDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 436 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK--RLDLHYR 318 R+EA + G+ R F + + + E L + H Sbjct: 437 HRAEASGSL---GGLTRLRCFQQDDAHIFCAPDQLEAEIYGCLDFLRSVYAVLGFSFHLA 493 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG ++ + E Sbjct: 494 LSTRPSGFLGEPCLWDQAEQLLQQSLEAFGE 524 >gi|121700783|ref|XP_001268656.1| threonyl-tRNA synthetase [Aspergillus clavatus NRRL 1] gi|119396799|gb|EAW07230.1| threonyl-tRNA synthetase [Aspergillus clavatus NRRL 1] Length = 532 Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 23/177 (12%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------------DGRWLIPTSE 233 ++G+ EV P + + +G + DDM+ + L P + Sbjct: 111 QYGFREVLTPTIYKRSLWEVSGHWQNYKDDMYEVRGRGATGEADGEAGEDESYGLKPMNC 170 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 L+ + + LP+R+ +P R+E + G+ R +F + + R + Sbjct: 171 PGHCLLFKSQNHSYRELPIRYADFSPLHRNEVSGSLS---GLTRVRRFHQDDGHIFCRPQ 227 Query: 294 DSFTEHERMLSCAEEILKRLDL-HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E L + ++ L YR+V + F LE+W + + RE Sbjct: 228 QIKGEIASALGFVDMVMTTFGLGPYRLVLSTRPEKDFIG----SLELWDSAEAQLRE 280 >gi|260584827|ref|ZP_05852572.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633] gi|260157484|gb|EEW92555.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633] Length = 334 Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 18/100 (18%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + ++ L+ + ILS+D I ++ ++A + Sbjct: 199 KLVLENPDSISQTILRKGLDAGTAYEILSID------IADVDVGRNIGAKLQAEQAEADK 252 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKEEH 92 +I QA AE SL + E ++ ++ E + Sbjct: 253 KIAQAKAEERRSLAVAQEQEMLAEVQRMRAKVVEAESQIP 292 >gi|78212568|ref|YP_381347.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Synechococcus sp. CC9605] gi|123756917|sp|Q3AKU0|SYT_SYNSC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|78197027|gb|ABB34792.1| threonyl-tRNA synthetase [Synechococcus sp. CC9605] Length = 611 Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D +GA A + + +F H E GY + P + Sbjct: 215 KDLDLFSIEDEAGAGLVFWHPRGARIRLLIEEFWRQAH-FEGGYELLYTPHVADISLWKT 273 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLPLRFTTLAPSFRSE 264 +G + +A+ MF + + + ++ + LP+R+ L +R E Sbjct: 274 SGHLDFYAESMFGPMEVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE 333 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E ++L E IL D Sbjct: 334 RPG---VMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERILSAFDF 381 >gi|33866012|ref|NP_897571.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102] gi|73919836|sp|Q7U662|SYT_SYNPX RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|33638987|emb|CAE07993.1| threonyl-tRNA synthetase [Synechococcus sp. WH 8102] Length = 611 Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D +GA A + + +F H E GY + P + Sbjct: 215 KDLDLFSIEDEAGAGLVFWHPRGARMRLLIEEFWRQAH-FEGGYELLYTPHVADISLWKT 273 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLPLRFTTLAPSFRSE 264 +G + +A+ MF + + + ++ + LP+R+ L +R E Sbjct: 274 SGHLDFYAESMFGPMEVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE 333 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E ++L E IL D Sbjct: 334 RPG---VMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERILSTFDF 381 >gi|197294184|ref|YP_001798725.1| threonyl-tRNA synthetase [Candidatus Phytoplasma australiense] gi|226701405|sp|B1V8W6|SYT_PHYAS RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|171853511|emb|CAM11353.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma australiense] Length = 641 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 9/208 (4%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + +D ++ G A L R + ++++D H Y V P++ Sbjct: 240 DHKRLNKKLDLFMFSQEVGLGLPFWLPKGATLRRIVERYIVDKEL-SHQYHHVYTPIMAN 298 Query: 203 DEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEII-----ESKSLPLRFTTL 257 E +G + ++ +MF + + I K LPLR L Sbjct: 299 VELYRTSGHLEHYSQNMFPVMQLENKEKIVLRPMNCPHHMMIYKKSPRSYKELPLRIAEL 358 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 R E A G+ R + + + R + E +++++ E+ + + Sbjct: 359 GMMHRFEKSGA---VSGLQRVREMNLNDAHNFVRPDQIEEEIKKIINLILEVYRDFKITK 415 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQN 345 L D D +W +N Sbjct: 416 YEFRLSYRDPQDKEKYFPDDNMWQHAEN 443 >gi|227877040|ref|ZP_03995129.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256843644|ref|ZP_05549132.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256850110|ref|ZP_05555540.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|293381761|ref|ZP_06627738.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|227863358|gb|EEJ70788.1| theronyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256615064|gb|EEU20265.1| threonyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256713082|gb|EEU28073.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|290921681|gb|EFD98706.1| threonyl-tRNA synthetase [Lactobacillus crispatus 214-1] Length = 644 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 74/199 (37%), Gaps = 9/199 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 DF GA A + R + +++ID ++ GY V P+L+ +A +G Sbjct: 249 DFFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVAD-GYQHVYTPVLMNLDAYKTSGH 307 Query: 212 IPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 + DDMF D L P + S +Y H I + LPLR L R E Sbjct: 308 WAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKS 367 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 A G+ R + + + + TE ++L ++ K D+ L D Sbjct: 368 GALS---GLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDYYFRLSYRD 424 Query: 327 LGFSACKTYDLEVWLAGQN 345 + + E+W Q Sbjct: 425 PKNTDKYFANDEMWERSQK 443 >gi|154253109|ref|YP_001413933.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] gi|189083615|sp|A7HWJ3|SYT_PARL1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|154157059|gb|ABS64276.1| threonyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] Length = 652 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 63/215 (29%), Gaps = 20/215 (9%) Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + + + E + D A+ SV Sbjct: 216 QRIYGTCWANENDLKAYLTMVEEAERRDHRKIGREMDLFHLQEEAQGSVFWHPKGWRIWQ 275 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG------------ 225 + + GY EV P L+ + +G K+ ++MF D Sbjct: 276 ALEQYVRRRIDAAGYVEVRTPQLLDSKFWEQSGHWGKYRENMFVVPDEVPSTDEDAPVLS 335 Query: 226 -----RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 + P + + ++ + + LPLR R+E A G++R Q Sbjct: 336 GKAKLMAIKPMNCPAHIQIFKQGVKSYRDLPLRMAEFGCCHRNEPHGALH---GLMRVRQ 392 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + E+ E E ++ E + + + Sbjct: 393 MTQDDAHIFCTEDQIKEETEAFVALLESVYEDMGF 427 >gi|161507864|ref|YP_001577828.1| theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|172048343|sp|A8YWE1|SYT_LACH4 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|160348853|gb|ABX27527.1| Theronyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 644 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 73/191 (38%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + RA+ +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 257 VGAGLPYWMPKGATIRRAVERYIIDREVAD-GYQHVYTPVLMNLDAYKTSGHWAHYRDDM 315 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S ++ H I + LPLR L R E A G Sbjct: 316 FPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 372 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + TE ++L E+ K D+ L D + Sbjct: 373 LQRVREMTLNDGHTFVALDQVQTEFAKILKLIMEVYKDFDITDYYFRLSYRDPKNTDKYF 432 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 433 ANDEMWEKSQK 443 >gi|16800662|ref|NP_470930.1| threonyl-tRNA synthetase [Listeria innocua Clip11262] gi|22654125|sp|Q92BF5|SYT_LISIN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|16414081|emb|CAC96825.1| threonyl-tRNA synthetase [Listeria innocua Clip11262] gi|313618753|gb|EFR90658.1| threonyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 640 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 7/158 (4%) Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIE 246 GY V P++ E +G + +DMF T L P + +Y ++I Sbjct: 288 GYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHS 347 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R++ Sbjct: 348 YRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELI 404 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E+ K D+ L D + D +W Q Sbjct: 405 LEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 442 >gi|228472826|ref|ZP_04057584.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] gi|228275877|gb|EEK14643.1| threonine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] Length = 649 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 77/310 (24%), Gaps = 20/310 (6%) Query: 54 NSAQIGQAIAEGNLSLVDALKNETSTLKE---QLPILEKEEHEVCSSLKKLISCIPNVPL 110 S + +G L + + + + Sbjct: 140 VSKAEALSYYKGKNEYKTELIEALEDGSITFCDHSTFTDLCRGGHLPNTGFVKAVKILSV 199 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK---LSGARFSVL 167 + N L R G E+ + E D + K L V Sbjct: 200 AGAYWRGNENNPQLTRVYGISFPKQKDLTEYLTLLEEAKKRDHRKLGKELELFTFSNKVG 259 Query: 168 TGHLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC- 221 G L + + + + GY +V P + +G K+ D F Sbjct: 260 QGLPLWLPKGAALRERLEAFLRKAQKQAGYEQVVTPHIGHKNLYVTSGHWEKYGKDSFQP 319 Query: 222 -----TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + L P + +Y+ K LP RF +R E + G+ Sbjct: 320 IATPNEGEEYLLKPMNCPHHCEIYNSHPWSYKDLPKRFAEFGTVYRYEQSG---ELHGLT 376 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 R F + + E E + ++ + L + D + Sbjct: 377 RVRCFTQDDAHIFCTPEQLDAEFKHVIDLVLYVFGSLGFDNFTAQVSLRDPENLSKYIGT 436 Query: 337 LEVWLAGQNL 346 E W +N Sbjct: 437 DENWAKAENA 446 >gi|313623625|gb|EFR93788.1| threonyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 640 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 7/158 (4%) Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIE 246 GY V P++ E +G + +DMF T L P + +Y ++I Sbjct: 288 GYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHS 347 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R++ Sbjct: 348 YRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELI 404 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E+ K D+ L D + D +W Q Sbjct: 405 LEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 442 >gi|47096724|ref|ZP_00234309.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|254898274|ref|ZP_05258198.1| threonyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254912233|ref|ZP_05262245.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936561|ref|ZP_05268258.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900] gi|47014908|gb|EAL05856.1| threonyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258609155|gb|EEW21763.1| threonyl-tRNA synthetase [Listeria monocytogenes F6900] gi|293590208|gb|EFF98542.1| threonyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 640 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 7/158 (4%) Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIE 246 GY V P++ E +G + +DMF T L P + +Y ++I Sbjct: 288 GYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHS 347 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R++ Sbjct: 348 YRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELI 404 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E+ K D+ L D + D +W Q Sbjct: 405 LEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 442 >gi|269836498|ref|YP_003318726.1| glycyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] gi|269785761|gb|ACZ37904.1| glycyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] Length = 469 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 16/176 (9%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ + + +P + +FR+E + R +F + E+ Sbjct: 176 TAQAIFLDYRNVLQSSRVKIPFGIAQIGKAFRNEI----TPGNFIFRLLEFEQMEIEYFI 231 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 R E E L + + + L R +L + +T D E + Sbjct: 232 RPEGWEPVFEEWLDAMQAFFRFIGLGEARLRQREHGPDELSHYSKRTVDFEYEFPF--GW 289 Query: 348 REISSCSTCGNFQSRR------MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 +E+ + +F RR ++ Y D + H + + + V R ++A++ Sbjct: 290 KELCGLAYRTDFDLRRHQEYSGVDLTYFDQATGERFLPHVVEPT-MGVERLMLALM 344 >gi|260575744|ref|ZP_05843741.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2] gi|259022142|gb|EEW25441.1| threonyl-tRNA synthetase [Rhodobacter sp. SW2] Length = 648 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 86/325 (26%), Gaps = 40/325 (12%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 R E + +++++ + +I + +R I +G V+ Sbjct: 110 DRIEPFTPEDLGAIEKRMKEIINLRDVVRTEVWDRPRAIAHYEQKGEPFKVE-------- 161 Query: 80 LKEQLPILEKEEHEVCSSLKK-----LISCIPNVPLEEV--------PIGTSANENILIR 126 L +P E + + +P + +N +L R Sbjct: 162 LIHGIPGDEPLRMYWHGHWQDLCRGPHLQHTGQLPADAFKLMSVAGAYWRGDSNRPMLQR 221 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG-------ARFSVLTGHLAHLERALG 179 G + H + E D R K A V Sbjct: 222 IYGVAFKNRDELKAHLTMLEEAAKRDHRRLGKEMDLFHLQEEAPGMVFWHPNGWQVWRTL 281 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVS 235 + + E GY E+ P +V +G + ++MF + + Sbjct: 282 EDYMRRRQREAGYREIRTPQVVDRVLWERSGHWEAYRENMFIVEVDEEGAKEKRINALKP 341 Query: 236 LTNLYSHEIIE-----SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 + ++ + LPLR R E+ G++R F + + Sbjct: 342 MNCPCHVQVYNQGLKSYRDLPLRLAEFGACHRYESSG---SMHGLMRVRGFTQDDAHIFC 398 Query: 291 REEDSFTEHERMLSCAEEILKRLDL 315 E +E + + L Sbjct: 399 TEAQIESECAAFIELLSSVYHDLGF 423 >gi|13508292|ref|NP_110242.1| threonyl-tRNA synthetase [Mycoplasma pneumoniae M129] gi|2501059|sp|P75225|SYT_MYCPN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|1673960|gb|AAB95937.1| threonyl-tRNA synthetase [Mycoplasma pneumoniae M129] gi|301633413|gb|ADK86967.1| threonine--tRNA ligase [Mycoplasma pneumoniae FH] Length = 564 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 7/167 (4%) Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC----TTDGRWLIPTSEVSLT 237 + G+ VS+P+L E +G +++DMF L P + Sbjct: 205 FVHYQQLMFGFKTVSSPVLANLELYKISGHYVHYSEDMFPSVKLENQMMMLRPMTCPHHC 264 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 ++ H+ K LP RF + R EA G+ R + R + Sbjct: 265 LIFKHKRRSYKELPQRFCEDSILHRFEASGGLT---GLERVRCMTLLDNHIFCRTDQIKA 321 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E + + + + + + L D A + ++W + Sbjct: 322 EIKNAFKLIQTVNNKFGFSFDRIDLALHDPNNKAKFIDNDQLWANSE 368 >gi|237744663|ref|ZP_04575144.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1] gi|229431892|gb|EEO42104.1| threonyl-tRNA synthetase [Fusobacterium sp. 7_1] Length = 637 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 87/321 (27%), Gaps = 39/321 (12%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ-IGQAIAEGNLSLVDALKNETSTL 80 + + E+ +E I A + I + Sbjct: 99 GFYYDFDPVEQFTEE------DLEKIEAEMKKIVKENIKLEKYVLPRDEAIKYFRDVDKN 152 Query: 81 K------EQLPILEKEEHEVCSSLKKLISC-----------IPNVPLEEVPIGTSANENI 123 K E +P E+ L L ++ + Sbjct: 153 KYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHVPSTGYLKAFKLRALAGAYWRGNSKNKM 212 Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG--------ARFSVLTGHLAHLE 175 L R G S ++H ++ E D + K F + Sbjct: 213 LQRIYGYSFSNEDKLKKHLKLVEEAEKRDHRKLGKELELFFLSEYGPGFPFFLPKGMIVR 272 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC--TTDGRWLIPTSE 233 L H + Y ++ P+++ E +G + ++M+ + + I Sbjct: 273 NVLVDLWRKEH-EKAEYLQLETPIMLNKELWEISGHWFNYRENMYTSEIDEVEFAIKPMN 331 Query: 234 VSLTNL-YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 L + H++ K LP R L R E A G++R F + + Sbjct: 332 CPGGVLAFKHQLHSYKDLPARLAELGKVHRHEFSGALH---GLMRVRSFTQDDSHIFMTP 388 Query: 293 EDSFTEHERMLSCAEEILKRL 313 E E +++ ++ +L Sbjct: 389 EQVQDEIIGVVNLIDKFYSKL 409 >gi|218259669|ref|ZP_03475318.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii DSM 18315] gi|218224962|gb|EEC97612.1| hypothetical protein PRABACTJOHN_00977 [Parabacteroides johnsonii DSM 18315] Length = 651 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 96/340 (28%), Gaps = 25/340 (7%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPI 86 +++ K L+ K E+I+ R S + G+ V L +E K Sbjct: 117 DFPAIEAKMLELVAKKEEIK--RQDISKADAMKMF-GDRGEVYKTELISELEDGKITTYT 173 Query: 87 LEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 + + + + L+R G + E+ Sbjct: 174 QGSFTDLCRGPHLPNTSYLKAVKIMSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYLA 233 Query: 144 IGEALGLMDFDRATK---LSGARFSVLTGHLAHLERALGQF-----MIDLHTSEHGYTEV 195 + E D + K L +V G L R + ++GY +V Sbjct: 234 LMEEAKKRDHRKIGKELELFTFSTAVGAGLPLWLPRGTQLRLKLEDFLKRIQKKYGYQQV 293 Query: 196 SAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHEII-----ESKS 249 P + + +G K+ D + + + EI K Sbjct: 294 MTPHIGGKQLYVTSGHYAKYGKDSFQPIHTPQEGEEFLLKPMNCPHHCEIFKSFPRSYKD 353 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEI 309 LPLRF +R E + G+ R F + + R + E +++ I Sbjct: 354 LPLRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCRPDQLKDEFLKVMDIIFII 410 Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 K LD + D E W ++ E Sbjct: 411 FKALDFENFEAQISLRDKVNRDKYIGSEENWEKAESAIIE 450 >gi|224128598|ref|XP_002339507.1| predicted protein [Populus trichocarpa] gi|222839714|gb|EEE78037.1| predicted protein [Populus trichocarpa] Length = 121 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 13/98 (13%) Query: 217 DDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 + D ++LI T+E L + ++ I LP+R G+ GRDT G+ Sbjct: 33 QQVTGEGDDKYLIATAEHPLCAYHLNDWIHPTQLPIRL-----------GAHGRDTLGIF 81 Query: 277 RQHQFWKCELVSITRE--EDSFTEHERMLSCAEEILKR 312 R QF K E IT +S+ E M+ +EE + Sbjct: 82 RVQQFEKVEYFCITSPNGNESWEALEEMIKNSEEFYQE 119 >gi|224373363|ref|YP_002607735.1| threonyl-tRNA synthetase [Nautilia profundicola AmH] gi|254783530|sp|B9L5U7|SYT_NAUPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|223589770|gb|ACM93506.1| threonyl-tRNA synthetase [Nautilia profundicola AmH] Length = 611 Score = 46.3 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 74/192 (38%), Gaps = 17/192 (8%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 R+H ++G L L FD GA + + A L L + + H Y V P Sbjct: 210 RDHRKLGTELELWMFDEE---VGAGMPIWLPNGALLRGNLEKLLYSAHI-RREYLPVRGP 265 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTT----------DGRWLIPTSEVSLTNLYSHEIIESK 248 L+R +G + ++M+ T D + P + ++ ++ H++ K Sbjct: 266 ELLRSHMWKISGHYYNYKENMYFTEIENDDPEKPADEYGIKPMNCLAHVKIFGHKVRSYK 325 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LPLR R E G+LR +F + + R + E ++L + Sbjct: 326 ELPLRLFEFGTVHRHEKSGVLH---GLLRVREFTQDDAHIFCRPDQIEEEVIKVLEFVDS 382 Query: 309 ILKRLDLHYRVV 320 I++R +Y + Sbjct: 383 IMERFGFNYEME 394 >gi|315303326|ref|ZP_07873955.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596] gi|313628306|gb|EFR96810.1| threonyl-tRNA synthetase [Listeria ivanovii FSL F6-596] Length = 640 Score = 46.3 bits (108), Expect = 0.011, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 113/337 (33%), Gaps = 22/337 (6%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IGQAIAEGNLSLVDALKNETSTLKE 82 E ++ ++++ + +++ E++ R S + I + A G+ ++ ++ + Sbjct: 111 ISDESLVEIEKEMQKIVR--ENVPIEREVVSREEAIKRFKAIGDEYKLELIEAIPADETV 168 Query: 83 QLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 + + I + + +N +L R G + + Sbjct: 169 TIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYGTAFFDKNGLK 228 Query: 140 EHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLER-ALGQFMIDLHTSEHG---- 191 E ++ + D + K L V G L + A + +I+ + + Sbjct: 229 EFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVIERYIVDKEERLG 288 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIES 247 Y V P++ E +G + +DMF T L P + +Y ++I Sbjct: 289 YNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHSY 348 Query: 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAE 307 + LP+R L R E A G+ R + R + E +R++ Sbjct: 349 RELPIRIAELGLMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELIL 405 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E+ K D+ L D + D +W Q Sbjct: 406 EVYKDFDITDYSFRLSYRDPKNTEKYFDDDAMWDKAQ 442 >gi|317969695|ref|ZP_07971085.1| threonyl-tRNA synthetase [Synechococcus sp. CB0205] Length = 590 Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 8/168 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +GA A + + +LH GY + P + +G Sbjct: 196 DLFSIEDEAGAGLVFWHPRGARMRLLIENLWRELH-FNAGYELLYTPHVADISLWKTSGH 254 Query: 212 IPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLPLRFTTLAPSFRSEAGS 267 + +++ MF + + + + LP+R+ L +R E Sbjct: 255 LDFYSESMFGPMQVDEREYQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYERPG 314 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E +L E+IL D Sbjct: 315 ---VMHGLMRVRGFTQDDAHVFCLPEQISDEILAILDLTEQILSTFDF 359 >gi|183230377|ref|XP_657185.2| mitotic chromosome and X-chromosome-associated protein [Entamoeba histolytica HM-1:IMSS] gi|169802951|gb|EAL51799.2| mitotic chromosome and X-chromosome-associated protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 1151 Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 45/124 (36%), Gaps = 23/124 (18%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR--------------- 48 I+ IR+N + +++ E + E + ++E+ +IK+ E + Sbjct: 664 IKRIRENLQFARE--RRKKAEYELEELDRMNEERERMIKQREKLERMIQEKEKELADLTN 721 Query: 49 ------ARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 R G+A+ + + ++ K + + +++ E++ + K+ Sbjct: 722 RKEEAINERKRMEGGQGEAVKKELQNKIEEEKGKLDKISKEIKRAEEQTRKREIEKMKIE 781 Query: 103 SCIP 106 Sbjct: 782 DWEK 785 >gi|317503053|ref|ZP_07961132.1| threonine--tRNA ligase [Prevotella salivae DSM 15606] gi|315665826|gb|EFV05414.1| threonine--tRNA ligase [Prevotella salivae DSM 15606] Length = 649 Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 48/167 (28%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEII-- 245 + Y EV P + +G + D F + + E+ Sbjct: 289 PYHYQEVITPGIGGKSLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEVYAR 348 Query: 246 ---ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LPLR FR E + G+ R F + + R + +E E Sbjct: 349 KPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVRPDQVKSEFETN 405 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + ++ K + D E+W +N RE Sbjct: 406 IDIILKVFKTFHFDNYEAQISLRDPKDKEKYIGSDEIWEESENAIRE 452 >gi|291515296|emb|CBK64506.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Alistipes shahii WAL 8301] Length = 604 Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHEII-- 245 E+GY +V P + E +G K+ D + + EI Sbjct: 240 EYGYQQVITPHIGNKELYVTSGHYAKYGKDSFQPIHTPIEGEEYLLKPMNCPHHCEIYRS 299 Query: 246 ---ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LP+R +R E + G+ R F + + R + E ER+ Sbjct: 300 KPRSYKELPVRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFVRPDQLLEEFERV 356 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 + I K L + D E W Sbjct: 357 IDIVLYIFKTLKFDNYTAQISLRDPNNKEKYIGSDENW 394 >gi|195441883|ref|XP_002068691.1| GK17912 [Drosophila willistoni] gi|194164776|gb|EDW79677.1| GK17912 [Drosophila willistoni] Length = 856 Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 7/137 (5%) Query: 1 ML-DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ML D I + + + +S+ +L L+EK +IE ++A+ N + QI Sbjct: 1 MLGDELDIYDDLDEFQEV-----EDKKSKELLDLEEKYTAAQGEIEGLKAQNNKLTKQIK 55 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q L+D K E + + L KE+ ++C KK P ++ P Sbjct: 56 QMEVNLQN-LLDTAKAEIKRKETLIAELRKEKDDICFRRKKAWGVEDTKPNQKRPRHDKT 114 Query: 120 NENILIRSVGKKPSAIH 136 + + K+ Sbjct: 115 DILENPGPIHKRAKQEE 131 >gi|55981844|ref|YP_145141.1| threonyl-tRNA synthetase [Thermus thermophilus HB8] gi|7388285|sp|P56881|SYT_THET8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|6689424|emb|CAB65483.1| threonyl-tRNA synthetase [Thermus thermophilus] gi|55773257|dbj|BAD71698.1| threonyl-tRNA synthetase [Thermus thermophilus HB8] Length = 659 Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 103/353 (29%), Gaps = 52/353 (14%) Query: 6 WIRQ---NPEHLDIAL---KKRHLEPQSEY--------ILSLDEKNRILIKKIEDIRARR 51 + R+ +PE + + + ++ E + +++ K R ++K+ D+ RR Sbjct: 85 FFREKGYDPESVRLGVGPVIEKGFYYDIEAPEPLSDEDLPAIEAKMREILKR--DLPLRR 142 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 S + A G L E E++ ++ + + +P+ Sbjct: 143 FVLSREEALARYRGKDPYKTELVLEIPE-GEEISFYQQGDEAYGFTDLCRGPHVPSTGRI 201 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL--MDFDRATKLSGARF----- 164 + R +P + F E L + A K R Sbjct: 202 PPHFKLTHVAGAYWRGDENRPMLQRVYGVAFRTAEELKEYLWQLEEAKKRDHRRLGRELE 261 Query: 165 --------------SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + G++ E + GY V+ P + E +G Sbjct: 262 LFLIDPLVGKGLVLWLPKGNVVREELMAFMREEQV---RRGYQLVTTPHIGSLELYKTSG 318 Query: 211 QIPKFADDMFCTTDGRWLIPTSE---VSLTNLYS-----HEIIESKSLPLRFTTLAPSFR 262 P +A+ F + E + + + + LPLR +R Sbjct: 319 HYPYYAESQFPPISFKERGEEEEYLLKPMNCPHHIRIYAYRKRSYRELPLRLAEFGTVYR 378 Query: 263 SEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 E + G+ R F + + E+ E +L ++ L L Sbjct: 379 YEKAG---ELLGLTRVRGFTQDDAHIFCTPEEVKGEFLGVLDLVLKVFATLGL 428 >gi|260437371|ref|ZP_05791187.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292810283|gb|EFF69488.1| threonine--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 651 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 94/304 (30%), Gaps = 36/304 (11%) Query: 44 IEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 ++++ A + + +++ K +L E+ + + Sbjct: 115 LDNLEAEMKKIIKEGASLERFELPREEAIKFMEDRGEPYKVELINDLPEDAVISFYRQGD 174 Query: 102 ISCIPNVPL---------------EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 + P ++N +L R G + + + E E Sbjct: 175 FVDLCAGPHLMSTKAIKAVKLTASSAAYWRGNSNNKVLTRIYGISFTKNDDLKAYLEHLE 234 Query: 147 ALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 + D ++ + + G ++ + R L +++ D GY Sbjct: 235 DIKRRDHNKLGREMELFTTVDVIGQGLPLIMPKGERIIRTLQRWIEDEE-DSRGYVRTKT 293 Query: 198 PLLVRDEAMYGTGQIPKFADDMF-----CTTDGRWLIPTSEVSLTNL-YSHEIIESKSLP 251 PL+ + + +G + D MF + + Y + LP Sbjct: 294 PLMAKSDLYKISGHWDHYKDGMFVLGDEEKDKEVFALRPMTCPFQYYVYKASQKSYRDLP 353 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 LR+ + FR+E + G+ R QF E I R + E + ++ A+ L+ Sbjct: 354 LRYGETSTLFRNEDSG---EMHGLTRVRQFTISEGHLIVRPDQMVKEFKDCIALAQYCLR 410 Query: 312 RLDL 315 L + Sbjct: 411 TLGV 414 >gi|167395675|ref|XP_001741701.1| DNA double-strand break repair Rad50 ATPase [Entamoeba dispar SAW760] gi|165893697|gb|EDR21837.1| DNA double-strand break repair Rad50 ATPase, putative [Entamoeba dispar SAW760] Length = 1135 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 15/124 (12%), Positives = 43/124 (34%), Gaps = 23/124 (18%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR--------------- 48 I+ IR+N + + +++ E + E + +E+ +IK+ E + Sbjct: 664 IKRIRENLQLVRE--RRKRAELELEELDRQNEEREKIIKQREKLERMIQEKEKELADLTN 721 Query: 49 ------ARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 R G+ + + + + K + + +++ E++ + K+ Sbjct: 722 RREEAINERKRIEVGQGEVVKKELQNKIREEKGKLDRISKEIKRAEEQTRKREIEKMKIE 781 Query: 103 SCIP 106 Sbjct: 782 DWEK 785 >gi|94985607|ref|YP_604971.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] gi|123079875|sp|Q1IY82|SYT_DEIGD RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|94555888|gb|ABF45802.1| threonyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] Length = 649 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 51/157 (32%), Gaps = 10/157 (6%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC- 221 + G + E + + Y V P + + +G P ++D F Sbjct: 270 PMWLPNGTVLREE---LTRFLREQQFQRDYQGVVTPNIGNLDLFRTSGHYPYYSDSQFEP 326 Query: 222 --TTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + ++++ +Y+ + + LP+R +R E + G+ R Sbjct: 327 LSVDEEQYMLKPMNCPFHIRIYASKPRSYRDLPVRLAEFGTVYRYEMSG---ELNGLTRV 383 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + R + E +L +LK + Sbjct: 384 RGFTQDDAHIFARPDQLKKEFLDVLDLTVLVLKTFGM 420 >gi|329954516|ref|ZP_08295607.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056] gi|328527484|gb|EGF54481.1| threonine--tRNA ligase [Bacteroides clarus YIT 12056] Length = 646 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 68/251 (27%), Gaps = 17/251 (6%) Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS---VLTG 169 + ++ R G + E+ + E D + K V G Sbjct: 203 AYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAKKRDHRKIGKEMDLFMFSDTVGKG 262 Query: 170 HLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD 224 L + Q + + + Y EV P + +G K+ D F Sbjct: 263 LPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIH 322 Query: 225 ------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 +L P + +Y + K LPLR R E + G+ R Sbjct: 323 TPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSG---ELHGLTRV 379 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 F + + R + E R++ + + + + D E Sbjct: 380 RSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHFENFEAQISLRDKVNREKYIGSDE 439 Query: 339 VWLAGQNLYRE 349 W + E Sbjct: 440 NWEKAEQAIIE 450 >gi|227833256|ref|YP_002834963.1| Threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|262184240|ref|ZP_06043661.1| threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|254783518|sp|C3PGS1|SYT_CORA7 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|227454272|gb|ACP33025.1| Threonyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 687 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 69/217 (31%), Gaps = 23/217 (10%) Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 E + +D G+ F V + A + + + H ++ GY+ VS P Sbjct: 263 EKRDHRRLGAELDLFSFPDEIGSGFPVFHPNGATVRMEMEEHSRRRHIAD-GYSFVSTPH 321 Query: 200 LVRDEAMYGTGQIPKFADDMFCTTD----------------GRWLIPTSEVSLTNLYSHE 243 L + + +G + +AD MF + P + +++ Sbjct: 322 LTKGDLFKKSGHLDFYADGMFPPMQLDGEWDADGYCTKQPQDYYAKPMNCPMHNLIFASR 381 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + LPLR +R E G+ R F + + E E ++L Sbjct: 382 GRSYRELPLRLFEFGTVYRYEKSG---VIHGLTRARGFTQDDSHIYCTPEQLEEELTKVL 438 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 +LK L + L T D E+W Sbjct: 439 EFIISLLKDYGLDDFYLELSTKD---PNKYVGSDEIW 472 >gi|254431853|ref|ZP_05045556.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197626306|gb|EDY38865.1| threonyl-tRNA synthetase [Cyanobium sp. PCC 7001] Length = 575 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 8/177 (4%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D +GA A + + F + H GY + P + +G Sbjct: 178 DLFSIEDEAGAGLVFWHPRGARMRLEIENFWREAH-FAAGYELLYTPHVADIGLWKTSGH 236 Query: 212 IPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLPLRFTTLAPSFRSEAGS 267 + +++ MF + + + + LP+R+ L +R E Sbjct: 237 LDFYSESMFGPMQVDEREYQLKPMNCPFHVLTYASTLRSYRELPIRWAELGTVYRYERPG 296 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 G++R F + + E E +L E IL R D ++L T Sbjct: 297 ---VMHGLMRVRGFTQDDAHVFCLPEQISDEILAILDLTERILSRFDFRSYEINLST 350 >gi|167763511|ref|ZP_02435638.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC 43183] gi|167698805|gb|EDS15384.1| hypothetical protein BACSTE_01885 [Bacteroides stercoris ATCC 43183] Length = 646 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 68/251 (27%), Gaps = 17/251 (6%) Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS---VLTG 169 + ++ R G + E+ + E D + K V G Sbjct: 203 AYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAKKRDHRKIGKEMDLFMFSDTVGKG 262 Query: 170 HLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD 224 L + Q + + + Y EV P + +G K+ D F Sbjct: 263 LPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIH 322 Query: 225 ------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 +L P + +Y + K LPLR R E + G+ R Sbjct: 323 TPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSG---ELHGLTRV 379 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 F + + R + E R++ + + + + D E Sbjct: 380 RSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHFENFEAQISLRDKVNREKYIGSDE 439 Query: 339 VWLAGQNLYRE 349 W + E Sbjct: 440 NWEKAEQAIIE 450 >gi|317476770|ref|ZP_07936013.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] gi|316906945|gb|EFV28656.1| threonyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 646 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 68/251 (27%), Gaps = 17/251 (6%) Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS---VLTG 169 + ++ R G + E+ + E D + K V G Sbjct: 203 AYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAKKRDHRKIGKEMDLFMFSDTVGKG 262 Query: 170 HLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD 224 L + Q + + + Y EV P + +G K+ D F Sbjct: 263 LPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIH 322 Query: 225 ------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 +L P + +Y + K LPLR R E + G+ R Sbjct: 323 TPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSG---ELHGLTRV 379 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 F + + R + E R++ + + + + D E Sbjct: 380 RSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHFENFEAQISLRDKVNREKYIGSDE 439 Query: 339 VWLAGQNLYRE 349 W + E Sbjct: 440 NWEKAEQAIIE 450 >gi|218130015|ref|ZP_03458819.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697] gi|217987818|gb|EEC54144.1| hypothetical protein BACEGG_01598 [Bacteroides eggerthii DSM 20697] Length = 646 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 68/251 (27%), Gaps = 17/251 (6%) Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS---VLTG 169 + ++ R G + E+ + E D + K V G Sbjct: 203 AYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAKKRDHRKIGKEMDLFMFSDTVGKG 262 Query: 170 HLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD 224 L + Q + + + Y EV P + +G K+ D F Sbjct: 263 LPMWLPKGAALRIRLQEFLRRIQARYDYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIH 322 Query: 225 ------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 +L P + +Y + K LPLR R E + G+ R Sbjct: 323 TPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSG---ELHGLTRV 379 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLE 338 F + + R + E R++ + + + + D E Sbjct: 380 RSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMHFENFEAQISLRDKVNREKYIGSDE 439 Query: 339 VWLAGQNLYRE 349 W + E Sbjct: 440 NWEKAEQAIIE 450 >gi|253680953|ref|ZP_04861756.1| proline--tRNA ligase [Clostridium botulinum D str. 1873] gi|253562802|gb|EES92248.1| proline--tRNA ligase [Clostridium botulinum D str. 1873] Length = 500 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 90/271 (33%), Gaps = 20/271 (7%) Query: 138 SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 + ++ + + ++ + Q +D E G+ V Sbjct: 35 PMDEDFAKWYTDIVKKAELVDYASVKGCMIIRPYGYAIWENIQKYLDTKFKETGHENVYM 94 Query: 198 PLLVRDEAMYGTGQIPK-FADDMFCTTD--------GRWLIPTSEVSLTNLYSHEIIESK 248 P+ + + + + FA ++ T + PTSE + Y+ I Sbjct: 95 PMFIPESLLQKEKDHVEGFAPEVAWVTQGGNDTLAERLCVRPTSETLFCDHYAKIIQSHN 154 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV--SITREEDSFTEHERMLSCA 306 LP ++ R E + TR LR +F E T EE + + + + A Sbjct: 155 DLPKKYNQWCSVVRWE-----KTTRPFLRTTEFLWQEGHTAHATAEESAQETIDMLNTYA 209 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 + L + + A TY +E + + + G+ S+ N Sbjct: 210 DFCENVLAMPVIKGQKTEKEKFAGAKATYTIESLM-HDGKALQSGTSHNFGDNFSKAFNI 268 Query: 367 RYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 +Y D NS+ L++ H S R + AI+ Sbjct: 269 QYNDKNSQ-LQYVHQ--TSWGVTTRLIGAII 296 >gi|150006539|ref|YP_001301283.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|319642944|ref|ZP_07997580.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A] gi|166223322|sp|A6L7J7|SYT_BACV8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|149934963|gb|ABR41661.1| threonyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|317385492|gb|EFV66435.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_40A] Length = 646 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 62/213 (29%), Gaps = 10/213 (4%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + MD T + G + L L F+ + + Y EV P + Sbjct: 242 DHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQA-RYDYQEVMCPPIGN 300 Query: 203 DEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 +G K+ D F +L P + +Y + K LPLR Sbjct: 301 KNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIAE 360 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 R E + G+ R F + + R + E R++ + K ++ Sbjct: 361 FGTVCRYEQSG---ELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMNFE 417 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + D E W + E Sbjct: 418 NVEAQISLRDKVNREKYIGSDENWEKAEQAIIE 450 >gi|254881560|ref|ZP_05254270.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294778842|ref|ZP_06744259.1| threonine--tRNA ligase [Bacteroides vulgatus PC510] gi|254834353|gb|EET14662.1| threonyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|294447295|gb|EFG15878.1| threonine--tRNA ligase [Bacteroides vulgatus PC510] Length = 646 Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 62/213 (29%), Gaps = 10/213 (4%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + MD T + G + L L F+ + + Y EV P + Sbjct: 242 DHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQA-RYDYQEVMCPPIGN 300 Query: 203 DEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 +G K+ D F +L P + +Y + K LPLR Sbjct: 301 KNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIAE 360 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 R E + G+ R F + + R + E R++ + K ++ Sbjct: 361 FGTVCRYEQSG---ELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMNFE 417 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + D E W + E Sbjct: 418 NVEAQISLRDKVNREKYIGSDENWEKAEQAIIE 450 >gi|212691282|ref|ZP_03299410.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855] gi|237712289|ref|ZP_04542770.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] gi|237726428|ref|ZP_04556909.1| threonyl-tRNA synthetase [Bacteroides sp. D4] gi|212666514|gb|EEB27086.1| hypothetical protein BACDOR_00773 [Bacteroides dorei DSM 17855] gi|229434954|gb|EEO45031.1| threonyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4] gi|229453610|gb|EEO59331.1| threonyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] Length = 646 Score = 45.9 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 62/213 (29%), Gaps = 10/213 (4%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + MD T + G + L L F+ + + Y EV P + Sbjct: 242 DHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQA-RYDYQEVMCPPIGN 300 Query: 203 DEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 +G K+ D F +L P + +Y + K LPLR Sbjct: 301 KNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIAE 360 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 R E + G+ R F + + R + E R++ + K ++ Sbjct: 361 FGTVCRYEQSG---ELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMNFE 417 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + D E W + E Sbjct: 418 NVEAQISLRDKVNREKYIGSDENWEKAEQAIIE 450 >gi|265751997|ref|ZP_06087790.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] gi|263236789|gb|EEZ22259.1| threonyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] Length = 646 Score = 45.9 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 62/213 (29%), Gaps = 10/213 (4%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + MD T + G + L L F+ + + Y EV P + Sbjct: 242 DHRKIGKEMDLFMFTDMVGKGLPMWLPKGTALRIRLQDFLRRIQA-RYDYQEVMCPPIGN 300 Query: 203 DEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 +G K+ D F +L P + +Y + K LPLR Sbjct: 301 KNLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRIAE 360 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 R E + G+ R F + + R + E R++ + K ++ Sbjct: 361 FGTVCRYEQSG---ELHGLTRVRSFTQDDAHLFCRPDQVKEEFLRVMDIINIVFKSMNFE 417 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + D E W + E Sbjct: 418 NVEAQISLRDKVNREKYIGSDENWEKAEQAIIE 450 >gi|82524022|emb|CAI78700.1| Threonyl-tRNA synthetase [uncultured Flavobacteriaceae bacterium] Length = 644 Score = 45.9 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 47/164 (28%), Gaps = 9/164 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHE---- 243 + GY V P + + E +G K+ AD + + + E Sbjct: 285 KAGYEMVVTPHIGQKELYVTSGHYAKYGADSFQPIKTPKEDEEFLLKPMNCPHHCEIYNN 344 Query: 244 -IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LP R+ +R E + G+ R F + + E E + + Sbjct: 345 SQWSYKDLPKRYAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCMPEQLDQEFKNV 401 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + L + D ++E W + Sbjct: 402 IDLVLYVFGSLGFENFTAQVSVRDPENPDKYIGEVENWEKAEQA 445 >gi|331270273|ref|YP_004396765.1| proline-tRNA ligase [Clostridium botulinum BKT015925] gi|329126823|gb|AEB76768.1| proline-tRNA ligase [Clostridium botulinum BKT015925] Length = 478 Score = 45.9 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 90/271 (33%), Gaps = 20/271 (7%) Query: 138 SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 + ++ + + ++ + Q +D E G+ V Sbjct: 13 PMDEDFAKWYTDIVKKAELVDYASVKGCMIIRPYGYAIWENIQKYLDTKFKETGHENVYM 72 Query: 198 PLLVRDEAMYGTGQIPK-FADDMFCTTD--------GRWLIPTSEVSLTNLYSHEIIESK 248 P+ + + + + FA ++ T + PTSE + Y+ I Sbjct: 73 PMFIPESLLQKEKDHVEGFAPEVAWVTQGGNDTLAERLCVRPTSETLFCDHYAKIIQSHN 132 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV--SITREEDSFTEHERMLSCA 306 LP ++ R E + TR LR +F E T EE + + + + A Sbjct: 133 DLPKKYNQWCSVVRWE-----KTTRPFLRTTEFLWQEGHTAHATAEESAQETIDMLNTYA 187 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 + L + + A TY +E + + + G+ S+ N Sbjct: 188 DFCENVLAMPVIKGQKTEKEKFAGAKATYTIESLM-HDGKALQSGTSHNFGDNFSKAFNI 246 Query: 367 RYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 +Y D NS+ L++ H S R + AI+ Sbjct: 247 QYNDKNSQ-LQYVHQ--TSWGVTTRLIGAII 274 >gi|326773248|ref|ZP_08232531.1| threonine--tRNA ligase [Actinomyces viscosus C505] gi|326636478|gb|EGE37381.1| threonine--tRNA ligase [Actinomyces viscosus C505] Length = 683 Score = 45.9 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 20/191 (10%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D + G V A L + Q+++D H ++G+ V P + + + +G Sbjct: 268 DLYSFPEEIGPGLVVFHPKGAMLRHQIEQYVVDRHL-DYGFDFVHTPEISKGGLFHTSGH 326 Query: 212 IPKFADDMFCTT----------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +P +AD MF +L + ++ + LPLRF Sbjct: 327 LPYYADTMFPPMLADEERDAEGNITKAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFF 386 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + +R E G+ R F + + + E + E + ILK L Sbjct: 387 EMGHDYRYEKSG---VVHGLTRMRGFTQDDSHTYCTPEQAGEEIRAQIDFFLSILKAFGL 443 Query: 316 HYRVVSLCTGD 326 + L T D Sbjct: 444 TDFYLELSTRD 454 >gi|325678420|ref|ZP_08158040.1| proline--tRNA ligase [Ruminococcus albus 8] gi|324109921|gb|EGC04117.1| proline--tRNA ligase [Ruminococcus albus 8] Length = 480 Score = 45.9 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 92/265 (34%), Gaps = 22/265 (8%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK-FADD 218 + + ++ + Q ++D E G+ V P+ + + + + FA + Sbjct: 35 TSVKGCMVIRPYGYAIWEHIQRILDTRFKELGHENVCMPMFIPESLLQKEKDHVEGFAPE 94 Query: 219 MFCTTD--------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 + T + PTSE Y++ + + LP + R E + Sbjct: 95 VAWVTHGGSEKLEDRLCVRPTSETLFCEHYANIVHSYRDLPKLYNQWVSVVRWE-----K 149 Query: 271 DTRGMLRQHQFWKCELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 TR LR +F E T EE + A+ K L + D Sbjct: 150 TTRPFLRSREFLWQEGHTIHETAEEAIEETERMLNCYADFCEKELAMPVVKGRKTDSDKF 209 Query: 329 FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH-TLNGSGV 387 A TY +E + + + G+ +R + ++ ++K L + H T S Sbjct: 210 AGAEATYAIEALM-HDGKALQAGTSHYFGDGFARAFDIQFTGRDNK-LSYPHQT---SWG 264 Query: 388 AVGRCLIAILENYLNADGSVTIPTV 412 R + AI+ + + +G V P V Sbjct: 265 VTTRLIGAIIMTHGDDNGLVLPPAV 289 >gi|242814543|ref|XP_002486389.1| DNA repair protein Rad18, putative [Talaromyces stipitatus ATCC 10500] gi|218714728|gb|EED14151.1| DNA repair protein Rad18, putative [Talaromyces stipitatus ATCC 10500] Length = 1139 Score = 45.9 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 1/108 (0%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR-ILIKKIEDIRARRNSNSAQIGQA 61 D + I ++ + + L R + + + R L + +R R +Q+ A Sbjct: 272 DYRLIEESVDAIKEMLDSRKEDLKVLRAAKERAQRRMELSDQRATLRQRIKKLRSQMAWA 331 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 E + D ++ E + L Q+ E E ++ + Sbjct: 332 QVEEQERIRDEIQEEVAKLDGQIAFAESETAIFDRKYEEAQRELETAT 379 >gi|116180492|ref|XP_001220095.1| hypothetical protein CHGG_00874 [Chaetomium globosum CBS 148.51] gi|88185171|gb|EAQ92639.1| hypothetical protein CHGG_00874 [Chaetomium globosum CBS 148.51] Length = 758 Score = 45.9 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 59/170 (34%), Gaps = 19/170 (11%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 T + +L + A + L F+ + +G+ EV P + + +G + + Sbjct: 1 MTSVYSPGSPILLPNGARIFNRLIDFLRQQYV-RYGFQEVITPTIYKKALWAKSGHLENY 59 Query: 216 ADDMFCTTD---------------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 +DDM+ T L P + +++ + + LP+R+ +P Sbjct: 60 SDDMYTVTSTSPSRAEVTDRGEEAEYGLKPMNCPGHCLIFASQTRSYRDLPIRYADFSPL 119 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 R+E A G+ R +F + + R E + L Sbjct: 120 HRNEISGALS---GLTRVRRFHQDDGHIFCRPSQIRDEIAKTLDFVRLTY 166 >gi|148239112|ref|YP_001224499.1| threonyl-tRNA synthetase [Synechococcus sp. WH 7803] gi|166225511|sp|A5GJT7|SYT_SYNPW RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|147847651|emb|CAK23202.1| Threonyl-tRNA synthetase [Synechococcus sp. WH 7803] Length = 610 Score = 45.9 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 8/171 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D +GA A + + +F H E GY + P + Sbjct: 215 KDLDLFSIEDEAGAGLVFWHPRGARMRLLIEEFWRQAH-FEGGYELLYTPHVADISLWKT 273 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS----HEIIESKSLPLRFTTLAPSFRSE 264 +G + +A+ MF + + + ++ + LP+R+ L +R E Sbjct: 274 SGHLDFYAESMFGPMEVDEREYQLKPMNCPFHVLTYASKLRSYRELPIRWAELGTVYRYE 333 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 G++R F + + E E ++L E IL D Sbjct: 334 RPG---VMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERILSTFDF 381 >gi|256274272|gb|EEU09179.1| Mst1p [Saccharomyces cerevisiae JAY291] Length = 429 Score = 45.9 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 9/131 (6%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + A + L +FM + G+ EV PL+ + +G +ADDMF Sbjct: 55 SPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMF 114 Query: 221 CT------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 + L P + ++ + LPLRF+ +P R+EA A G Sbjct: 115 KVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALS---G 171 Query: 275 MLRQHQFWKCE 285 + R +F + + Sbjct: 172 LTRLRKFHQDD 182 >gi|154295615|ref|XP_001548242.1| hypothetical protein BC1G_13078 [Botryotinia fuckeliana B05.10] gi|150843958|gb|EDN19151.1| hypothetical protein BC1G_13078 [Botryotinia fuckeliana B05.10] Length = 442 Score = 45.5 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 19/157 (12%) Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT------------ 222 + S G+ EV P + + +G +A+DM+ Sbjct: 1 MFKALTEFLSAQYSHFGFEEVITPTIYKKSLWEKSGHWENYAEDMYSVVGRGASGETIGG 60 Query: 223 ----TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + L P + +++ + + +P+R+T +P R+E A G+ R Sbjct: 61 QKGENEEYGLKPMNCPGHCLIFASKQRSYREMPVRYTDFSPLHRNEISGALS---GLTRV 117 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +F + + R E L + L L Sbjct: 118 RRFHQDDGHIFCRPSQIGKEISGTLEFVRMVYTTLGL 154 >gi|312886253|ref|ZP_07745867.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] gi|311301278|gb|EFQ78333.1| Ser-tRNA(Thr) hydrolase ;threonyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] Length = 641 Score = 45.5 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 92/348 (26%), Gaps = 31/348 (8%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 E S+ +++K I ++ ++ R S + L Sbjct: 112 EFSSDEFKKIEDK----IIELAKTKSDFVRKPVSKADAIEYFTEKDDEYK--LDLIKDLP 165 Query: 82 EQLPILEKEEHEVCSS------LKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 + + + I + + + + L R Sbjct: 166 DGSITFYTQGNFTDLCRGPHIPNTGFIKAVKLMSVAGAYWRGDESRKQLTRIYAVTFPKA 225 Query: 136 HLSREHFEIGEALGLMDFDRATK---LSGARFSVLTGHLAHLERALGQ-----FMIDLHT 187 ++ + E D + K L V G L + + Sbjct: 226 SELTDYLHLIEEAKKRDHRKLGKELELFAFSEKVGMGLPLWLPKGTALRERLVNFLQKAQ 285 Query: 188 SEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYS 241 + GY +V P + +G K+ D F + +L P + +Y Sbjct: 286 VKAGYEQVITPHIGHKNLYVTSGHYEKYGADSFQPIKTPQEGEEFFLKPMNCPHHCEIYK 345 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + K LP+RF +R E + G+ R F + + R + E ++ Sbjct: 346 TKPRSYKDLPVRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCRPDQVKEEFKK 402 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 ++ + L + D A E W + E Sbjct: 403 VIDLVLYVFNALGFKDYTAQVSLRDPENKAKYIGTDENWAIAEAAIIE 450 >gi|291545263|emb|CBL18372.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Ruminococcus sp. 18P13] Length = 646 Score = 45.5 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 62/182 (34%), Gaps = 10/182 (5%) Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT-SEV 234 L Q ++ GY PL+ + + +G + + MF D + Sbjct: 275 IQLLQRFVEDEEQRRGYLLTKTPLMAKSDLYKISGHWDHYKEGMFVLGDEEKDKEVFALR 334 Query: 235 SLTNLYSHE-----IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 +T + ++ + LP+R + FR+E + G++R QF E I Sbjct: 335 PMTCPFQYQVFLNRPRSYRDLPMRLGETSTLFRNEDSG---EMHGLIRVRQFTISEGHLI 391 Query: 290 TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG-DLGFSACKTYDLEVWLAGQNLYR 348 R E E L A +L L L V + D + E W Q + Sbjct: 392 LRPEQLEDEFRGCLELANYMLTTLGLADDVTYRFSQWDPNNTEKYIGTPEQWDEAQGAMK 451 Query: 349 EI 350 +I Sbjct: 452 KI 453 >gi|145230415|ref|XP_001389516.1| threonyl-tRNA synthetase [Aspergillus niger CBS 513.88] gi|134055633|emb|CAK37279.1| unnamed protein product [Aspergillus niger] Length = 526 Score = 45.5 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 23/177 (12%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------------DGRWLIPTSE 233 ++G+ EV P + + +G + DDM+ + L P + Sbjct: 105 QYGFREVLTPTIYKRSLWEVSGHWQNYKDDMYEVRGRGATGDTDGEAGEDESYGLKPMNC 164 Query: 234 VSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE 293 L+ + + LP+R+ +P R+E + G+ R +F + + R + Sbjct: 165 PGHCLLFKSQTHSYRELPIRYADFSPLHRNEVSGSLS---GLTRVRRFHQDDGHIFCRPQ 221 Query: 294 DSFTEHERMLSCAEEILKRLDL-HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E L + ++ L YR+V + F LE+W + + RE Sbjct: 222 QIKGEIASALGFVDLVMTTFGLGPYRLVLSTRPEKDFIG----SLELWNSAEAQLRE 274 >gi|295102728|emb|CBL00273.1| glycyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6] Length = 473 Score = 45.5 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 12/151 (7%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + + LP + +FR+E R +F + E Sbjct: 173 TAQGIFVNFANIQRTTRRKLPFGVCQVGKAFRNEI----TPGNFTFRTREFEQMECEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + E L L + H R+ +L F + T D+E + + Sbjct: 229 KPGTDLEWFSYWKDYCENWLLSLGIKKEHLRLRDHEPAELAFYSRATTDIEYAFPFTD-W 287 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 E+ + N+ +R+++ + KSL++ Sbjct: 288 GELWGIADRTNYD----LTRHQEASGKSLEY 314 >gi|295693387|ref|YP_003601997.1| threonyl-tRNA synthetase [Lactobacillus crispatus ST1] gi|295031493|emb|CBL50972.1| Threonyl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 645 Score = 45.5 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 72/191 (37%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 257 VGAGLPYWMPKGATIRRVVERYIIDREVAD-GYQHVYTPVLMNLDAYKTSGHWAHYRDDM 315 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S +Y H I + LPLR L R E A G Sbjct: 316 FPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 372 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + TE ++L ++ K D+ L D + Sbjct: 373 LQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYF 432 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 433 ANDEMWERSQK 443 >gi|262047409|ref|ZP_06020366.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|260572383|gb|EEX28946.1| threonyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] Length = 644 Score = 45.5 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 72/191 (37%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 257 VGAGLPYWMPKGATIRRVVERYIIDREVAD-GYQHVYTPVLMNLDAYKTSGHWAHYRDDM 315 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S +Y H I + LPLR L R E A G Sbjct: 316 FPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 372 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + TE ++L ++ K D+ L D + Sbjct: 373 LQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYF 432 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 433 ANDEMWERSQK 443 >gi|227484882|ref|ZP_03915198.1| viral A family inclusion protein [Anaerococcus lactolyticus ATCC 51172] gi|227237242|gb|EEI87257.1| viral A family inclusion protein [Anaerococcus lactolyticus ATCC 51172] Length = 638 Score = 45.5 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + E L + ++ + + + +++ L K+ E++R + + ++G+ + + + Sbjct: 538 KELEALINSETQKGTDLD-KKLEDQNKEIEKLRKENEELRKEIDKINKELGKLKKQADDA 596 Query: 69 LVDALKN-ETSTLKE 82 +ALK + + +KE Sbjct: 597 KDEALKKAKEAAIKE 611 Score = 43.2 bits (100), Expect = 0.087, Method: Composition-based stats. Identities = 11/96 (11%), Positives = 40/96 (41%), Gaps = 7/96 (7%) Query: 11 PEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA------ 63 E ++ L+ ++ + + + E+N+ ++++++A + + +I + Sbjct: 402 LEEVNKNLENSKNQLKEIDEKIKALEENKADKAELDNLKAEKEQLTNKIAELEKSLAAAD 461 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + N D +K E + +L ++++ + Sbjct: 462 QSNKDETDKIKKELDEARNKLGKVDEKIKGLEDDSN 497 Score = 40.5 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 19/125 (15%) Query: 5 QWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIE-----------DIRARR 51 + I+ N + + K ++ + + I K + L ++ E ++ + Sbjct: 354 KKIKDNSDRIAELEKNKNGSGKGSDKEIAENKNKLKELKQEQEKNKASLEEVNKNLENSK 413 Query: 52 NSNSAQIGQAIA-----EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 N +I + I + + + +D LK E L ++ LEK S K I Sbjct: 414 NQL-KEIDEKIKALEENKADKAELDNLKAEKEQLTNKIAELEKSLAAADQSNKDETDKIK 472 Query: 107 NVPLE 111 E Sbjct: 473 KELDE 477 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 43/104 (41%), Gaps = 7/104 (6%) Query: 8 RQNPEHLDIAL-KKRHLEPQSEY-ILSL-DEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + + + L + R+ + + I L D+ NR +IE ++A+++ + +I + Sbjct: 465 KDETDKIKKELDEARNKLGKVDEKIKGLEDDSNRKA--EIEALKAQKDELAKKIAELEKS 522 Query: 65 GN--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + ++N+ L+ + ++ ++ L+ I Sbjct: 523 KTNLENKDKEIENKVKELEALINSETQKGTDLDKKLEDQNKEIE 566 >gi|319902630|ref|YP_004162358.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides helcogenes P 36-108] gi|319417661|gb|ADV44772.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Bacteroides helcogenes P 36-108] Length = 646 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 61/213 (28%), Gaps = 10/213 (4%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + MD + G + L L F+ + + Y EV P + Sbjct: 242 DHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQA-RYDYQEVMCPPIGN 300 Query: 203 DEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 +G K+ D F +L P + +Y + K LPLR Sbjct: 301 KLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAE 360 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 R E + G+ R F + + R + E R++ + + +D Sbjct: 361 FGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMDFE 417 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + D E W + E Sbjct: 418 NFEAQISLRDKVNRDKYIGSDENWEKAEQAIIE 450 >gi|299135303|ref|ZP_07028494.1| threonyl-tRNA synthetase [Afipia sp. 1NLS2] gi|298590280|gb|EFI50484.1| threonyl-tRNA synthetase [Afipia sp. 1NLS2] Length = 681 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 90/296 (30%), Gaps = 28/296 (9%) Query: 21 RHLEPQSEYILSLDEKNRILIKK-----IEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 R+ E ++++K R +I + E + + Q+ E + Sbjct: 133 RNEPFTPEDFAAIEKKMREIIARDKPFTKEVWTREQ---TKQVFSDNGEMFKVELLDAIP 189 Query: 76 ETSTLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 +K +Q + +S+ K+ + + + +N +L R G + Sbjct: 190 ADQQIKIYKQGDWFDLCRGPHMTSVGKVGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFA 249 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS----- 188 + + + E D R + G A G + + Sbjct: 250 SQQDLDAYLKQLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTLFQAIIAYMRRR 309 Query: 189 -EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEVSLTN 238 Y EV+AP ++ +G + ++MF + P + Sbjct: 310 LAADYDEVNAPQMLDKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIKPMNCPGHVL 369 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ H + + LP+R R E A G++R F + + E+ Sbjct: 370 IFKHGLKSYRELPIRLAEFGVVHRYEPSGA---MHGLMRVRGFTQDDAHIFCTEDQ 422 >gi|293376342|ref|ZP_06622579.1| glycine--tRNA ligase [Turicibacter sanguinis PC909] gi|292645031|gb|EFF63104.1| glycine--tRNA ligase [Turicibacter sanguinis PC909] Length = 457 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 15/191 (7%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP-T 231 E + ++ + + + + + E M+ T + +L P T Sbjct: 116 WTEEQMMNYIREHNIACPDCGAHDFTDIRQFELMFKT-----HMGVVSDEKSAVYLRPET 170 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ N + + K +P + SFR+E R +F + EL + Sbjct: 171 AQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCK 226 Query: 292 EEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + +E L L + H R +L + T D+E + Sbjct: 227 PGEDAKWYEFWKEYCWNWLVSLGMNPEHIRQREHSPEELSHYSNGTSDIEYRFPF--GWG 284 Query: 349 EISSCSTCGNF 359 E+ + +F Sbjct: 285 ELWGVANRTDF 295 >gi|313637683|gb|EFS03062.1| threonyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 483 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 7/158 (4%) Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIE 246 GY V P++ E +G + +DMF T L P + +Y ++I Sbjct: 131 GYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHS 190 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R++ Sbjct: 191 YRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELI 247 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E+ K D+ L D + D +W Q Sbjct: 248 LEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWDKAQ 285 >gi|329945633|ref|ZP_08293366.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] gi|328528636|gb|EGF55601.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] Length = 683 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 20/191 (10%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D + G V A L + Q+++D H ++G+ V P + + + +G Sbjct: 268 DLYSFPEEIGPGLVVFHPKGAMLRHQIEQYVVDRH-QDYGFDFVHTPEISKGGLFHTSGH 326 Query: 212 IPKFADDMFCTT----------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +P +AD MF +L + ++ + LPLRF Sbjct: 327 LPYYADTMFPPMLADEERDGQGNITKAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFF 386 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + +R E G+ R F + + + E + E + ILK L Sbjct: 387 EMGHDYRYEKSG---VVHGLTRMRGFTQDDSHTYCTPEQAGEEIRAQIDFFLSILKAFGL 443 Query: 316 HYRVVSLCTGD 326 + L T D Sbjct: 444 TDFYLELSTRD 454 >gi|325068893|ref|ZP_08127566.1| threonine--tRNA ligase [Actinomyces oris K20] Length = 683 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 20/191 (10%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D + G V A L + Q+++D H ++G+ V P + + + +G Sbjct: 268 DLYSFPEEIGPGLVVFHPKGAMLRHQIEQYVVDRH-QDYGFDFVHTPEISKGGLFHTSGH 326 Query: 212 IPKFADDMFCTT----------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +P +AD MF +L + ++ + LPLRF Sbjct: 327 LPYYADTMFPPMLADEERDAEGNITKAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFF 386 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + +R E G+ R F + + + E + E + ILK L Sbjct: 387 EMGHDYRYEKSG---VVHGLTRMRGFTQDDSHTYCTPEQAGEEIRAQIDFFLSILKAFGL 443 Query: 316 HYRVVSLCTGD 326 + L T D Sbjct: 444 TDFYLELSTRD 454 >gi|313633110|gb|EFS00008.1| threonyl-tRNA synthetase [Listeria seeligeri FSL N1-067] Length = 485 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 7/158 (4%) Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIE 246 GY V P++ E +G + +DMF T L P + +Y ++I Sbjct: 133 GYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHS 192 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R++ Sbjct: 193 YRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELI 249 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E+ K D+ L D + D +W Q Sbjct: 250 LEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWDKAQ 287 >gi|325843420|ref|ZP_08167978.1| glycine--tRNA ligase [Turicibacter sp. HGF1] gi|325489342|gb|EGC91716.1| glycine--tRNA ligase [Turicibacter sp. HGF1] Length = 457 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 15/191 (7%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP-T 231 E + ++ + + + + + E M+ T + +L P T Sbjct: 116 WTEEQMMNYIREHNIACPDCGAHDFTDIRQFELMFKT-----HMGVVSDEKSAVYLRPET 170 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ N + + K +P + SFR+E R +F + EL + Sbjct: 171 AQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCK 226 Query: 292 EEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + +E L L + H R +L + T D+E + Sbjct: 227 PGEDAKWYEFWKEYCWNWLVSLGMNPEHIRQREHSPEELSHYSNGTSDIEYRFPF--GWG 284 Query: 349 EISSCSTCGNF 359 E+ + +F Sbjct: 285 ELWGVANRTDF 295 >gi|296228691|ref|XP_002759919.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1 [Callithrix jacchus] Length = 718 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G+ EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNALVAFIRAEYA-RRGFFEVKTPTLFSTKLWEQSGHWEHYQEDMF 376 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TTD L P + + +++H + LPLR Sbjct: 377 AVQPPGSDRPASSQSDHSTRHTTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 436 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA G+ R F + + + E + L + L +R Sbjct: 437 HRAEASGGLC---GLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA 493 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 494 LSTRPSGFLGDPCLWDQAEQVLQQALKEFGE 524 >gi|208780328|ref|ZP_03247669.1| seven Residue Repeat family protein [Francisella novicida FTG] gi|208743696|gb|EDZ89999.1| seven Residue Repeat family protein [Francisella novicida FTG] Length = 888 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 12/106 (11%) Query: 6 WIRQNPEHLDIALKKRHLEPQSEYILS-------LDEKNRILIKKIEDIR---ARRNSNS 55 +I QN + +D ++++ + E + I L+++ L +KIE+++ A S Sbjct: 322 FISQNKDFMDGSVQQVNNEVLEDQINKYKDSCNLLEKERNDLKQKIEELKRDNAELKKVS 381 Query: 56 AQIGQAI--AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 I + A ++ K E L+E+L E+ E K Sbjct: 382 GDIDKLREQARKEQENIEKKKQEFEKLEEKLNQQNFEKLEKEQQEK 427 >gi|187736261|ref|YP_001878373.1| glycyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187426313|gb|ACD05592.1| glycyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 525 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 68/213 (31%), Gaps = 22/213 (10%) Query: 204 EAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 M+ T ++ T T++ + LP + SFR+ Sbjct: 200 NLMFKTTIGATSDENDPNATGWLRP-ETAQSIFCQYKNILDSSRVKLPFGIAQIGKSFRN 258 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL---HYRVV 320 E R +F + E+ R ED + L + + H ++ Sbjct: 259 EIN----PRNFTFRSREFEQMEIEYFCRPEDGLRLVDEWLEHRLCFYDEVGVPREHIHIL 314 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF--------QSRRMNSRYRDPN 372 + G+ F + KTYDLE E+ + ++ R + Y D Sbjct: 315 DVPDGERAFYSKKTYDLEYEFPFGIQ--ELEGIAYRTDYDLSCHQKGSGRPLE--YFDEE 370 Query: 373 SKSLKFTHTLNGSGVAVGRCLIAIL-ENYLNAD 404 ++ H + S R ++AI+ E Y + Sbjct: 371 TREKFIPHVVEPSA-GCDRTILAIICEAYDEEE 402 >gi|326336128|ref|ZP_08202300.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691637|gb|EGD33604.1| threonine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 649 Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 48/162 (29%), Gaps = 9/162 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSH 242 + GY +V P + +G K+ D F + L P + +Y+ Sbjct: 286 QAGYEQVVTPHIGHKNLYVTSGHWEKYGKDSFQPIATPNEGEEYLLKPMNCPHHCEIYNS 345 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LP RF +R E + G+ R F + + E E + + Sbjct: 346 HPWSYKDLPKRFAEFGTVYRYEQSG---ELHGLTRVRCFTQDDAHIFCTPEQLDAEFKHV 402 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + + L + D + E W + Sbjct: 403 IDLVLYVFGSLGFENFTAQVSLRDPENLSKYIGSDENWAKAE 444 >gi|295104663|emb|CBL02207.1| glycyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3] Length = 473 Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 12/151 (7%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + + LP + +FR+E R +F + E Sbjct: 173 TAQGIFVNFANIQRTTRRKLPFGVCQVGKAFRNEI----TPGNFTFRTREFEQMECEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + E L L + H R+ +L F + T D+E + + Sbjct: 229 KPGTDLDWFAYWKDYCENWLLSLGIKKEHLRLRDHEPAELAFYSRATTDIEYAFPFTD-W 287 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 E+ + N+ +R+++ + KSL++ Sbjct: 288 GELWGIADRTNYD----LTRHQEASGKSLEY 314 >gi|224070913|ref|XP_002303293.1| predicted protein [Populus trichocarpa] gi|222840725|gb|EEE78272.1| predicted protein [Populus trichocarpa] Length = 975 Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 41/100 (41%), Gaps = 10/100 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILS--------LDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ++ + + LK++ + + E + L+ K L K+ + +R N S Sbjct: 388 EHLKIVIEELKRKSNDAEIESLREEYHQRVATLERKVYALTKERDTLRREHNKKSD--AA 445 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 A+ + +++ + E L ++ E ++ + +++ Sbjct: 446 ALLKEKDEIINQVMAEGEELSKKQAAQESTIRKLRAQIRE 485 >gi|118444161|ref|YP_878835.1| prolyl-tRNA synthetase [Clostridium novyi NT] gi|152016596|sp|A0Q2I3|SYP_CLONN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|118134617|gb|ABK61661.1| prolyl-tRNA synthetase [Clostridium novyi NT] Length = 478 Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 88/271 (32%), Gaps = 20/271 (7%) Query: 138 SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 + ++ + + ++ + Q +D E G+ V Sbjct: 13 PMDEDFAKWYTDIVKKAELVDYASVKGCMIIRPYGYAIWENIQKYLDTKFKETGHENVYM 72 Query: 198 PLLVRDEAMYGTGQIPK-FADDMFCTTD--------GRWLIPTSEVSLTNLYSHEIIESK 248 P+ + + + + FA ++ T + PTSE + Y+ I Sbjct: 73 PMFIPESLLQKEKDHVEGFAPEVAWVTQGGNDTLAERLCVRPTSETLFCDHYAKIIQSHN 132 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV--SITREEDSFTEHERMLSCA 306 LP ++ R E + TR LR +F E T EE + + + A Sbjct: 133 DLPKKYNQWCSVVRWE-----KTTRPFLRTTEFLWQEGHTAHATAEESAKETIDMLNVYA 187 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 L + + A TY +E + + + G+ S+ N Sbjct: 188 NFCENVLAIPVIKGQKTEKEKFAGAKATYTIESLM-HDGKALQSGTSHNFGDNFSKAFNI 246 Query: 367 RYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 +Y D NS+ L++ H S R + AI+ Sbjct: 247 QYNDKNSQ-LQYVHQ--TSWGVTTRLIGAII 274 >gi|312984108|ref|ZP_07791455.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05] gi|310894462|gb|EFQ43537.1| threonine--tRNA ligase [Lactobacillus crispatus CTV-05] Length = 644 Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 72/191 (37%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 257 VGAGLPYWMPKGATIRRVVERYIIDREVAD-GYQHVYTPVLMNLDAYKTSGHWAHYRDDM 315 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S +Y H I + LPLR L R E A G Sbjct: 316 FPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 372 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + TE ++L ++ K D+ L D + Sbjct: 373 LQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYF 432 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 433 ANDEMWERSQK 443 >gi|195016104|ref|XP_001984341.1| GH15069 [Drosophila grimshawi] gi|193897823|gb|EDV96689.1| GH15069 [Drosophila grimshawi] Length = 461 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 103/296 (34%), Gaps = 49/296 (16%) Query: 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 + + + E G ++S P+L + TG++ + + Sbjct: 44 NGTYQIMPIAQRAVDKCINL-VQRNMQEAGGQKISMPVLTPTQLWKKTGRLEGDISEFYM 102 Query: 222 TTDGRW----LIPTSEVSLTNLYSHE-IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 D + PT E ++T + + I + LPLR + P FR E S G++ Sbjct: 103 VRDRSGKQFLMSPTHEEAVTAMLATTAPISYRQLPLRLYQIGPKFRDELKSRF----GLM 158 Query: 277 RQHQFWKCELVSIT-REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTY 335 R +F ++ + +E + + R+ + + ++L++ + V TG +G S Y Sbjct: 159 RAKEFLMKDMYTFDVTKEAAEKTYARISNTYAQFFRQLEVPFVTVEAATGIMGGSLSHEY 218 Query: 336 ---------------------DLEVW-------LAGQN-------LYREISSCSTCGNFQ 360 ++EV+ E++ G+ Sbjct: 219 HYISPVGEDTLLKCNNCGYAGNVEVFGNTSANTCPSCQGSQLIPVRGVEVAHTFLLGDKY 278 Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 S+ + + + + + K + G+ + R + A LE + P +L PY Sbjct: 279 SKPLGATFLNTSGKPETLV--MGCYGIGITRVIAAALEVLSTEQ-ELRWPKLLAPY 331 >gi|325298803|ref|YP_004258720.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] gi|324318356|gb|ADY36247.1| threonyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] Length = 647 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 62/213 (29%), Gaps = 10/213 (4%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + MD + + G + L L F+ + + Y EV P + Sbjct: 243 DHRKIGKEMDLFMFSDMVGKGLPMWLPKGTALRIRLQDFLRRIQA-RYDYQEVMCPPIGN 301 Query: 203 DEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 +G K+ D F +L P + +Y + + LPLR Sbjct: 302 KLLYVTSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYRNSPRSYRDLPLRIAE 361 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 R E + G+ R F + + R + E R++ + K ++ Sbjct: 362 FGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFKSMNFE 418 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + D E W + E Sbjct: 419 NFEAQISLRDKVNREKYIGSDENWEKAEQAIVE 451 >gi|156120539|ref|NP_001095415.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus] gi|152941102|gb|ABS44988.1| threonyl-tRNA synthetase-like 1 [Bos taurus] Length = 718 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ +T G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNALVAFIKAEYT-RRGFSEVKTPTLFSAKLWELSGHWEHYREDMF 376 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 377 ALQPPGLDRPSSSQSDHSASPHTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 436 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS--CAEEILKRLDLHYR 318 R+EA + G+ R F + + + E L + + H Sbjct: 437 HRAEASGSL---GGLTRLRCFQQDDAHIFCAPDQLEAEIRGCLDFLHSVYTILGFSFHMA 493 Query: 319 VVSLCTGDLG 328 + + +G LG Sbjct: 494 LSTRPSGFLG 503 >gi|296489553|gb|DAA31666.1| threonyl-tRNA synthetase, mitochondrial [Bos taurus] Length = 718 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ +T G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNALVAFIKAEYT-RRGFSEVKTPTLFSAKLWELSGHWEHYREDMF 376 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 377 ALQPPGLDRPSSSQSDHSASPHTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 436 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS--CAEEILKRLDLHYR 318 R+EA + G+ R F + + + E L + + H Sbjct: 437 HRAEASGSL---GGLTRLRCFQQDDAHIFCAPDQLEAEIRGCLDFLHSVYTILGFSFHMA 493 Query: 319 VVSLCTGDLG 328 + + +G LG Sbjct: 494 LSTRPSGFLG 503 >gi|312136682|ref|YP_004004019.1| seryl-tRNA synthetase [Methanothermus fervidus DSM 2088] gi|311224401|gb|ADP77257.1| seryl-tRNA synthetase [Methanothermus fervidus DSM 2088] Length = 497 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 38/196 (19%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 K G T +A L RA +I+ G+ E P L+ MY + Sbjct: 194 IKKFPGRGQWFYTPPMAALCRAFESLLIEKVVEPLGFEECLFPKLIPLSIMYKMRYLEGL 253 Query: 216 ADDMFCT---------------------------------TDGRWLIPTSEVSLTNLYSH 242 + M+ L P SH Sbjct: 254 PEGMYYCSAPKRDPELFKKFKNELIIKKEIPINLLKEGLRDPSYVLAPAQCEPFYEFLSH 313 Query: 243 EIIESKSLPLRFTTLA-PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 E+++ LP++F + ++R EAG A +G+ R H+F + E+V + ED ++ Sbjct: 314 EVVDKSELPIKFFDRSGWTYRWEAGGA----KGLDRVHEFQRIEMVWLGTPEDVEKIRDK 369 Query: 302 MLSCAEEILKRLDLHY 317 + ++++ +L+L + Sbjct: 370 TVELSQKLADKLELEW 385 >gi|329961279|ref|ZP_08299445.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057] gi|328531944|gb|EGF58761.1| threonine--tRNA ligase [Bacteroides fluxus YIT 12057] Length = 646 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 89/333 (26%), Gaps = 40/333 (12%) Query: 54 NSAQIGQAIAEG------NLSLVDALK-----------NETSTLKEQLPILEKEEHEVCS 96 ++ + +A+ +++ DALK S L++ + Sbjct: 121 IEKKMAELVAKKEAVVRQDIAKADALKMFGDRGETYKCELISELEDGHITTYTQGAFTDL 180 Query: 97 SLKKLISCI------PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + I + + ++ R G + E+ + E Sbjct: 181 CRGPHLMTIAPIKAIKLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAKK 240 Query: 151 MDFDRATKLSGARFS---VLTGHLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLLVR 202 D + K V G L + Q + S + Y EV P + Sbjct: 241 RDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQSRYDYQEVMCPPIGN 300 Query: 203 DEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 +G K+ D F +L P + +Y + K LPLR Sbjct: 301 KLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAE 360 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 R E + G+ R F + + R + E R++ + + + Sbjct: 361 FGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFQSMAFE 417 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + D E W + E Sbjct: 418 NFEAQISLRDKVNRDKYIGSDENWEKAEQAIIE 450 >gi|160943130|ref|ZP_02090367.1| hypothetical protein FAEPRAM212_00610 [Faecalibacterium prausnitzii M21/2] gi|158445599|gb|EDP22602.1| hypothetical protein FAEPRAM212_00610 [Faecalibacterium prausnitzii M21/2] Length = 473 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 12/151 (7%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + + LP + +FR+E R +F + E Sbjct: 173 TAQGIFVNFANIQRTTRRKLPFGVCQVGKAFRNEI----TPGNFTFRTREFEQMECEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + E L L + H R+ +L F + T D+E + + Sbjct: 229 KPGTDLDWFAYWKDYCENWLLSLGIKKEHLRLRDHEPAELAFYSRATTDIEYAFPFTD-W 287 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 E+ + N+ +R+++ + KSL++ Sbjct: 288 GELWGIADRTNYD----LTRHQEASGKSLEY 314 >gi|58337807|ref|YP_194392.1| threonyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227904456|ref|ZP_04022261.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] gi|73919799|sp|Q5FIW3|SYT_LACAC RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|58255124|gb|AAV43361.1| theronyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227867831|gb|EEJ75252.1| theronyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] Length = 644 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 72/191 (37%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 257 VGAGLPYWMPKGATIRRVVERYIIDREVAD-GYKHVYTPVLMNLDAYKTSGHWAHYRDDM 315 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S +Y H I + LPLR L R E A G Sbjct: 316 FPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 372 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + +E ++L ++ + D+ L D + Sbjct: 373 LQRVREMTLNDGHTFVELDQVQSEFAKILKLIMDVYRDFDITDYYFRLSYRDPKNTDKYF 432 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 433 ANDEMWERSQK 443 >gi|331082613|ref|ZP_08331736.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] gi|330400232|gb|EGG79874.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] Length = 658 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 9/167 (5%) Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 + G +L + + L +++ DL +E GY PL+ +++ +G Sbjct: 252 TTVDVIGQGLPLLMPKGVIMLKELQRWIEDLEDNEWGYVRTKTPLMAKNDLYKISGHWDH 311 Query: 215 FADDMF-----CTTDGRWLIPTSEVSLTNL-YSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 + + MF + + Y + LP+R+ + FR+E Sbjct: 312 YKEGMFVLGDEEKDKEVFALRPMTCPFQYYVYKANQHSYRELPIRYGETSTLFRNEDSG- 370 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + G+ R QF E I R + E + L+ A+ L+ L + Sbjct: 371 --EMHGLTRVRQFTISEGHLIVRPDQMVEEFKGCLALAKHCLETLGV 415 >gi|226355500|ref|YP_002785240.1| threonyl-tRNA synthetase [Deinococcus deserti VCD115] gi|259516378|sp|C1D0W2|SYT_DEIDV RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|226317490|gb|ACO45486.1| putative threonine--tRNA ligase (threonyl-tRNA synthetase) [Deinococcus deserti VCD115] Length = 649 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 10/157 (6%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC- 221 + G + E A + GY V P + E +G P +AD F Sbjct: 270 PLWLPNGTVLREELAG---FLKEQQFRRGYQGVITPNIGNLELYKTSGHYPYYADGQFNP 326 Query: 222 --TTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 D ++++ +Y+ + + LP+R +R E + G+ R Sbjct: 327 IEVDDEQYMLKPMNCPHHVRIYASKPRSYRDLPVRLAEFGTVYRYEQSG---ELNGLTRV 383 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + R + E +L +LK + Sbjct: 384 RGFTQDDAHLFCRPDQLKKEFLDVLDLTVLVLKTFGM 420 >gi|192292254|ref|YP_001992859.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] gi|192286003|gb|ACF02384.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] Length = 687 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 88/297 (29%), Gaps = 36/297 (12%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI---GQAIA----EGNLSLVD-- 71 R+ E ++++K R +I AR + ++ +A G V+ Sbjct: 139 RNEPFTPEDFAAIEKKMREII-------ARDKPFTKEVWTRDEAKKVFADNGEAFKVELV 191 Query: 72 ALKNETSTLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 E T+K +Q + +S K+ + + + +N +L R G Sbjct: 192 DAIPEDQTIKIYKQGEWFDLCRGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYG 251 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS- 188 + + E D + + G A G + Sbjct: 252 TAFAKQDDLDAYLHQIEEAEKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWSLFQSLVGY 311 Query: 189 -----EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEV 234 Y EV+AP ++ +G + ++MF L P + Sbjct: 312 MRRRLAGDYDEVNAPQILDKVLWETSGHWEWYRENMFAAQSAGDDAEDKRWFALKPMNCP 371 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ H + + LPLR R E A G++R F + + Sbjct: 372 GHVQIFKHGLKSYRDLPLRLAEFGVVHRYEPSGA---MHGLMRVRGFTQDDAHVFCT 425 >gi|868027|gb|AAC43605.1| threonyl-tRNA synthetase [Buchnera aphidicola] gi|1098080|prf||2115235B Thr-tRNA synthetase Length = 642 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 8/159 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 G F G + E + F+ + Y EV PLL+ +G + D + Sbjct: 260 PGMIFWHNNGWIIFNELEI--FVREKLKGIINYKEVKTPLLIHKSIWQKSGHWDNYQDRI 317 Query: 220 FCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGML 276 F T + P + +++ + + LP+R R+E+ + G++ Sbjct: 318 FTTSSENREYCIKPMNCPGHVQIFNCGLKSYRDLPIRMAEFGSCHRNESSGSLH---GLM 374 Query: 277 RQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R F + + +E E + ++ + Sbjct: 375 RIRNFTQDDAHIFCTQEQLRYEINNCIKMIYDLYSTFNF 413 >gi|297626431|ref|YP_003688194.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922196|emb|CBL56764.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 680 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 70/208 (33%), Gaps = 21/208 (10%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D + G V L + ++ H + G+ V P++ + + + Sbjct: 262 QELDLFSFPEEIGPGLVVFHPKGGILRHEIESYITKRHI-DAGFDLVDTPIISKGDLFHT 320 Query: 209 TGQIPKFADDMFCTT----------------DGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 +G +P +AD MF +L + ++ + LPL Sbjct: 321 SGHLPYYADTMFPPMTVDEEVDAEGNVRHQGQEYYLKAMNCPMHNLIFRSRGRSYRELPL 380 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKR 312 RF L FR E +G+ R F + + + E + E + +L IL+ Sbjct: 381 RFYELGRDFRYEKSG---VVQGLTRMRGFTQDDSHTYCTPEQAGDEIKMLLGFFLSILRD 437 Query: 313 LDLHYRVVSLCTGDLGFSACKTYDLEVW 340 L + L T D S D E W Sbjct: 438 FGLKEFYLELSTRDASSSKFIGSD-EDW 464 >gi|198275235|ref|ZP_03207766.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135] gi|198271818|gb|EDY96088.1| hypothetical protein BACPLE_01394 [Bacteroides plebeius DSM 17135] Length = 646 Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 92/338 (27%), Gaps = 27/338 (7%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 ++++K L K E++ R S S + G+ S L++ + Sbjct: 120 AIEKKMAELAAKKEEL--VRQSISKE-DALKMFGDRGETYK-CELISELEDGHISTYTQG 175 Query: 92 HEVCSSL------KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 I I + + + + R G + E+ + Sbjct: 176 AFTDLCRGPHLLSTAPIKAIKLLSVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYLVML 235 Query: 146 EALGLMDFDRATKLSGARFS---VLTGHLAHLERAL-----GQFMIDLHTSEHGYTEVSA 197 E D + K V G L + Q + + + Y EV Sbjct: 236 EEAKKRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMC 295 Query: 198 PLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLP 251 P + +G K+ D F +L P + +Y + + LP Sbjct: 296 PPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYRDLP 355 Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK 311 LR R E + G+ R F + + R + E R++ + Sbjct: 356 LRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFT 412 Query: 312 RLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + L + D E W + E Sbjct: 413 SMGLENFEAQISLRDKENREKYIGSDENWEKAEQAIVE 450 >gi|254993456|ref|ZP_05275646.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] Length = 445 Score = 45.1 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 7/158 (4%) Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIE 246 GY V P++ E +G + +DMF T L P + +Y ++I Sbjct: 93 GYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHS 152 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R++ Sbjct: 153 YRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELI 209 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 E+ K D+ L D + D +W Q Sbjct: 210 LEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWEKAQ 247 >gi|68000901|ref|XP_669755.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56484298|emb|CAI02831.1| hypothetical protein PB300934.00.0 [Plasmodium berghei] Length = 166 Score = 45.1 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 40/96 (41%), Gaps = 3/96 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYI---LSLDEKNRILIKKIEDIRARRNSNSAQI 58 L ++++++N + + LKKR +E + E I +L + L ++R +R S ++ Sbjct: 2 LSLKFLKENEQKVIEYLKKRGIEKKLEDINVMKNLIHEKNQLEIVRNNLRNKRKILSDKV 61 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 + + L+D + ST + Sbjct: 62 KDLMLKNKNILMDENRRNNSTNNNDNEFYNANKDGC 97 >gi|298674488|ref|YP_003726238.1| phosphoserine phosphatase [Methanohalobium evestigatum Z-7303] gi|298287476|gb|ADI73442.1| phosphoserine phosphatase [Methanohalobium evestigatum Z-7303] Length = 306 Score = 45.1 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 65/186 (34%), Gaps = 23/186 (12%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 D++ R N + L KR+ L+ K + L+ + +D +++R+ N+ +I + Sbjct: 41 DLKLYRNNIDELKE---KRN---------ELNTKVKDLVSQAQDFKSKRDENNKKITELK 88 Query: 63 AEGNL---------SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP-LEE 112 ++ + + + LK + + L + E+ + S E Sbjct: 89 SKRDEIQKQNKSKANEIAQLKKKRNELNDISKGTEETLSKAYSQELNKFLNEDIPLNHEI 148 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF-DRATKLSGARFSVLTGHL 171 N + + + + H +E + + + D+ +L+ + Sbjct: 149 DLFERLENLKKRLEAAQEANNIHHKIQEIYNTSFDDNINELNDQIQQLADESQQYHLQMV 208 Query: 172 AHLERA 177 + +A Sbjct: 209 EYFNKA 214 >gi|255722445|ref|XP_002546157.1| prolyl-tRNA synthetase [Candida tropicalis MYA-3404] gi|240136646|gb|EER36199.1| prolyl-tRNA synthetase [Candida tropicalis MYA-3404] Length = 559 Score = 45.1 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 5/164 (3%) Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG 225 V L + +I E G+ E+S L+ + TG+ K + D Sbjct: 49 VNWSKSGLLIQNKISSIIRSRMDEIGFEELSLSLISYKKLWQETGRWDKSTEIFKLEGDE 108 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 L+PT+E +T+ + + K LP+ + P FR+E R G+LR +F + Sbjct: 109 YLLVPTAEEEITDYINKNLESYKQLPILMYQINPKFRNEK----RPRGGLLRGKEFLMKD 164 Query: 286 LVSITREE-DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 S +E ++ +E+++ +I L + Y +GD+G Sbjct: 165 AYSFDLDESNAMNTYEKVVGAYHKIFGDLKIPYVKAQADSGDIG 208 >gi|223938078|ref|ZP_03629976.1| threonyl-tRNA synthetase [bacterium Ellin514] gi|223893292|gb|EEF59755.1| threonyl-tRNA synthetase [bacterium Ellin514] Length = 618 Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 67/201 (33%), Gaps = 19/201 (9%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 R+H +IG+ +GL D G + G + E + GY V P Sbjct: 204 RDHRKIGQEMGLFAIDTEYVGPGLPLWLPKGTMIVEELENLAKETEFAA---GYVRVKTP 260 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTTD------------GRWLIPTSEVSLTN-LYSHEII 245 L +++ +G +P +A+ MF + R+ + + +++ E Sbjct: 261 HLAKEKMYKTSGHLPYYAESMFPPMELKEKGGDSNEEAERYYLKAMNCPHHHRIFAAEPH 320 Query: 246 ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 + LPLR +R E + G++R + EE E + Sbjct: 321 SYRDLPLRLAEYGTCYRYEQSG---ELFGLMRVRSLNMNDAHIYCTEEQFADEFNAVNEM 377 Query: 306 AEEILKRLDLHYRVVSLCTGD 326 + K L + T D Sbjct: 378 YLKYFKIFGLEKYQMRFSTHD 398 >gi|24762616|ref|NP_611908.2| Sterile20-like kinase, isoform A [Drosophila melanogaster] gi|21626742|gb|AAM68311.1| Sterile20-like kinase, isoform A [Drosophila melanogaster] Length = 1300 Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 13/109 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1202 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 1251 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 Q E +LV+ ++ S + E+L +E E K++ IP Sbjct: 1252 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQVCMQIPV 1300 >gi|260589197|ref|ZP_05855110.1| threonine--tRNA ligase [Blautia hansenii DSM 20583] gi|260540278|gb|EEX20847.1| threonine--tRNA ligase [Blautia hansenii DSM 20583] Length = 658 Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 9/167 (5%) Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 + G +L + + L +++ DL +E GY PL+ +++ +G Sbjct: 252 TTVDVIGQGLPLLMPKGVIMLKELQRWIEDLEDNEWGYVRTKTPLMAKNDLYKISGHWDH 311 Query: 215 FADDMF-----CTTDGRWLIPTSEVSLTNL-YSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 + + MF + + Y + LP+R+ + FR+E Sbjct: 312 YKEGMFVLGDEEKDKEVFALRPMTCPFQYYVYKANQHSYRELPIRYGETSTLFRNEDSG- 370 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + G+ R QF E I R + E + L+ A+ L+ L + Sbjct: 371 --EMHGLTRVRQFTISEGHLIVRPDQMVEEFKGCLALAKHCLETLGV 415 >gi|39936469|ref|NP_948745.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] gi|73919820|sp|Q6N4D3|SYT_RHOPA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|39650325|emb|CAE28847.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] Length = 658 Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 88/297 (29%), Gaps = 36/297 (12%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI---GQAIA----EGNLSLVD-- 71 R+ E ++++K R +I AR + ++ +A G V+ Sbjct: 110 RNEPFTPEDFAAIEKKMREII-------ARDKPFTKEVWTRDEAKKVFADNGEAFKVELV 162 Query: 72 ALKNETSTLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 E T+K +Q + +S K+ + + + +N +L R G Sbjct: 163 DAIPEDQTIKIYKQGEWFDLCRGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYG 222 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS- 188 + + E D + + G A G + Sbjct: 223 TAFAKQDDLDAYLHQIEEAEKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWSLFQSLVGY 282 Query: 189 -----EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEV 234 Y EV+AP ++ +G + ++MF L P + Sbjct: 283 MRRRLAGDYDEVNAPQILDKVLWETSGHWEWYRENMFAAQSAGDDAEDKRWFALKPMNCP 342 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ H + + LPLR R E A G++R F + + Sbjct: 343 GHVQIFKHGLKSYRDLPLRLAEFGVVHRYEPSGA---MHGLMRVRGFTQDDAHVFCT 396 >gi|328951014|ref|YP_004368349.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] gi|328451338|gb|AEB12239.1| threonyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] Length = 647 Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 76/286 (26%), Gaps = 26/286 (9%) Query: 50 RRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEH------EVCSSLKKLIS 103 RR S + A G L + E++ E+E S K+ Sbjct: 142 RRYVLSREEALARYRGKDPYKTELIQDLPE-DEEISFYEQEGFTDLCRGPHVPSTGKIPP 200 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK----- 158 + +L R G + E D + + Sbjct: 201 FFKLTHVAGAYWRGDETRPMLQRVYGVAFRTKEELDHYLWQLEEAKKRDHRKLGRELELF 260 Query: 159 ----LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 + G + + L QFM + GY V+ P + E +G P Sbjct: 261 LIDPMVGKGLPLWLPKGNTVRELLVQFMREEQL-RRGYQLVTTPHVGSLELYKTSGHYPY 319 Query: 215 FADDMFCTTDGRWLIPTSEVSLTNLYS-----HEIIESKSLPLRFTTLAPSFRSEAGSAG 269 +AD F + + + + LPLR +R E Sbjct: 320 YADSQFPPIELED-EAYLLKPMNCPHHIRIYAARPRSYRELPLRLAEFGTVYRFEQSG-- 376 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + G+ R F + + E E +L + + L + Sbjct: 377 -ELHGLTRVRGFTQDDAHIFCTPEQVKEEFLSVLDLTMHVFRTLGM 421 >gi|188994826|ref|YP_001929078.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] gi|238691475|sp|B2RJD6|SYT_PORG3 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|188594506|dbj|BAG33481.1| threonyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] Length = 653 Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 47/167 (28%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNLYSHE---- 243 GY +V P + +G K+ D F + + + E Sbjct: 288 HFGYQQVITPHIGNKNLYITSGHYAKYGQDSFRPINTPQEGEEFMLKPMNCPHHCEIFKI 347 Query: 244 -IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + LP+R +R E + G+ R F + + R + E ++ Sbjct: 348 TPHSYRDLPIRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCRPDQLKEEFCKV 404 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + I K LD + D E W + E Sbjct: 405 MDIIFIIFKALDFKNFEAQISLRDKVNREKYIGSEENWERAERAIIE 451 >gi|325957298|ref|YP_004292710.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|325333863|gb|ADZ07771.1| threonyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|327184028|gb|AEA32475.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 644 Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 71/191 (37%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 257 VGAGLPYWMPKGATIRRVVERYIIDREVAD-GYQHVYTPVLMNLDAYKTSGHWAHYRDDM 315 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S +Y H I + LPLR L R E A G Sbjct: 316 FPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 372 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + E ++L ++ K D+ L D + Sbjct: 373 LQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTEKYF 432 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 433 ANDEMWERSQK 443 >gi|34540737|ref|NP_905216.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83] gi|73919814|sp|Q7MVQ5|SYT_PORGI RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|34397051|gb|AAQ66115.1| threonyl-tRNA synthetase [Porphyromonas gingivalis W83] Length = 653 Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 47/167 (28%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNLYSHE---- 243 GY +V P + +G K+ D F + + + E Sbjct: 288 HFGYQQVITPHIGNKNLYITSGHYAKYGQDSFRPINTPQEGEEFMLKPMNCPHHCEIFKI 347 Query: 244 -IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + LP+R +R E + G+ R F + + R + E ++ Sbjct: 348 TPHSYRDLPIRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHLFCRPDQLKEEFCKV 404 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + I K LD + D E W + E Sbjct: 405 MDIIFIIFKALDFKNFEAQISLRDKVNREKYIGSEENWERAERAIIE 451 >gi|315038857|ref|YP_004032425.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|312276990|gb|ADQ59630.1| threonyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] Length = 645 Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 71/191 (37%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 257 VGAGLPYWMPKGATIRRVVERYIIDREVAD-GYQHVYTPVLMNLDAYKTSGHWAHYRDDM 315 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S +Y H I + LPLR L R E A G Sbjct: 316 FPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 372 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + E ++L ++ K D+ L D + Sbjct: 373 LQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTEKYF 432 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 433 ANDEMWERSQK 443 >gi|170584765|ref|XP_001897164.1| bifunctional aminoacyl-tRNA synthetase [Brugia malayi] gi|158595450|gb|EDP34004.1| bifunctional aminoacyl-tRNA synthetase, putative [Brugia malayi] Length = 1572 Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 48/371 (12%), Positives = 105/371 (28%), Gaps = 25/371 (6%) Query: 61 AIAEGNLSLVDALKNETSTLKEQL--------PILEKEEHEVCSSLKKLISCIPNVPLEE 112 A ++ + L K++ + ++ + E+ Sbjct: 1010 AKSQEAKDAIAELLKLKKQYKDEFGEDYTANATNTNSSTAKKVVTVTNEERQKSDXKKEK 1069 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 + V + + + +E ++ + + + Sbjct: 1070 KEEVKPKTTLASMEMVKQTKLGLDVKKEENLAEWYSQIIIKADMIEYYDVSGCYILRPWS 1129 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG-QIPKFADDMFCTTDGRW---- 227 + + D + G P+ V + I FA ++ T Sbjct: 1130 FAIWEIVKKWFDTEIKKCGVRNCYFPIFVSQNGLQREKEHIDDFAPEVAWVTRAGNSELS 1189 Query: 228 ----LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 + PTSE + Y+ I + LP+R R E + LR +F Sbjct: 1190 EPIAIRPTSETVMYPSYAKWIQSYRDLPIRLNQWCNVVRWE----FKHPTPFLRTREFLW 1245 Query: 284 CELVSI--TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 E + T++E + A+ + + T +E ++ Sbjct: 1246 QEGHTAFQTKQEAEEEVFAILDLYAKVYTDLFAIPVIKGRKSEKEKFAGGEFTTTVEAYV 1305 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 + ++ G S+ + + DP + F N G+ R + A++ + Sbjct: 1306 PVNGRGIQGATSHHLGQNFSKMFDISFEDPETGKKTFAWQ-NSWGM-TTRTIGAMIMIHS 1363 Query: 402 NADGSVTIPTV 412 + DG V P V Sbjct: 1364 DNDGLVLPPRV 1374 >gi|163814965|ref|ZP_02206352.1| hypothetical protein COPEUT_01115 [Coprococcus eutactus ATCC 27759] gi|158449648|gb|EDP26643.1| hypothetical protein COPEUT_01115 [Coprococcus eutactus ATCC 27759] Length = 477 Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 90/265 (33%), Gaps = 22/265 (8%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK----- 214 + + + + L Q +D G V P+L+ + + + Sbjct: 35 TNVKGCMAIKPAGYAIWELIQKQLDERFKATGVENVYMPMLIPESLLEKEKDHVEGFAPE 94 Query: 215 ----FADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 + T+ + PTSE + Y ++I + LP + R E + Sbjct: 95 VAWVTYGGLNPLTERMCVRPTSETLFCDFYKNDIQSYRDLPKVYNQWCSVMRWE-----K 149 Query: 271 DTRGMLRQHQFWKCE--LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 +TR LR +F E T EE + + A+ L + + Sbjct: 150 ETRPFLRSREFLWQEGHTAHATAEEAEARTIQMLNLYADFCEDVLAMPVIRGQKTEKEKF 209 Query: 329 FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH-TLNGSGV 387 A TY +E + + + G+ ++ ++ D ++K LK+ H T S Sbjct: 210 AGAEATYTIEALM-HDGKALQSGTSHNFGDGFAKAFGIQFTDKDNK-LKYVHQT---SWG 264 Query: 388 AVGRCLIAILENYLNADGSVTIPTV 412 R + AI+ + + G V P V Sbjct: 265 MTTRLIGAIIMVHGDNSGLVLPPKV 289 >gi|171688027|ref|XP_001908954.1| hypothetical protein [Podospora anserina S mat+] gi|170943975|emb|CAP69627.1| unnamed protein product [Podospora anserina S mat+] Length = 577 Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 9/174 (5%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 S A + ++ L + + + VS + +G++ A ++ Sbjct: 40 SHAGIFHMLPLGRRVQTKLEELVARHMEHMLAASRVSLSAVSSQSLWDKSGRLENTASEL 99 Query: 220 F----CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGM 275 F G L PT E +T L + +K LPLR + P +R E R G+ Sbjct: 100 FKFSDRKNVGYLLAPTHEEEITALVAQTAKTAKDLPLRLFQITPKYRDE----FRPRHGL 155 Query: 276 LRQHQFWKCELVSITRE-EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 LR +F +L + E + ++ + +I + + L +G++G Sbjct: 156 LRGREFVMKDLYTFDSSKESALETYDNVRLVYSQIFEEMKLPVLAAKASSGNMG 209 >gi|260811386|ref|XP_002600403.1| hypothetical protein BRAFLDRAFT_129060 [Branchiostoma floridae] gi|229285690|gb|EEN56415.1| hypothetical protein BRAFLDRAFT_129060 [Branchiostoma floridae] Length = 1229 Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 16/106 (15%) Query: 3 DIQWIRQNPEHLDIAL---KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 DIQ + + E L K R + ++ + L++K + + E +G Sbjct: 764 DIQGLEKTIEEGKEVLAGAKDRQKKA-ADKVKELEKKMKEAQQHRE---KELKEAEKNVG 819 Query: 60 QAIAEGNLS---------LVDALKNETSTLKEQLPILEKEEHEVCS 96 +A + S ++A+K E LK+++ E++ V Sbjct: 820 KAKEKAEKSSKQMREKGQELEAVKLEGEELKKEIAGYEEQMKAVDQ 865 >gi|227529941|ref|ZP_03959990.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] gi|227350126|gb|EEJ40417.1| threonine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] Length = 601 Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 73/201 (36%), Gaps = 9/201 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D GA A + R + +++ID ++ GY V P+L+ +A Sbjct: 203 NQLDLFFVDPKVGAGLPYWMPKGATIRRTIERYIIDREVAD-GYKHVYTPVLMNLDAYKT 261 Query: 209 TGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 +G + DDMF D L P + S +Y H I + LPLR L R Sbjct: 262 SGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRIAELGMMHRY 321 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 E A G+ R + + + + +E ++L ++ K D+ L Sbjct: 322 EKSGALS---GLQRVREMTLNDGHTFVTLDQIRSEFAKILRLIMDVYKDFDITDYSFRLS 378 Query: 324 TGDLGFSACKTYDLEVWLAGQ 344 D + E+W Q Sbjct: 379 LRDPKNVKKYYANDEMWEKSQ 399 >gi|154420334|ref|XP_001583182.1| hypothetical protein [Trichomonas vaginalis G3] gi|121917422|gb|EAY22196.1| hypothetical protein TVAG_093700 [Trichomonas vaginalis G3] Length = 3556 Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 22/208 (10%), Positives = 66/208 (31%), Gaps = 17/208 (8%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRI--------LIKKIEDIRARRNSNSAQI 58 +R+ + L AL K+H++ + E +E + ++++ + N + Sbjct: 518 LRKKFKELADALNKKHVKDEIEAAKHKEEVRKKWEEVLSELKKQELQKALDKHNEIQKKW 577 Query: 59 GQA-IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE-EVPIG 116 A+ D ++ E L++ E + + + ++ + + Sbjct: 578 EDLSKAQLKKQRQDDMQKEKQKLEDGKKWQELARNYMKMARTYVLKAGRKYIDDSRAKLK 637 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + ++R + R+ + + + + + ++ Sbjct: 638 SRKLSRAVVREWNALTQSRDYVRDSYN-------SAIESYSISFQNAAAEMIQNVFRNHL 690 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDE 204 DL +H +T A ++R + Sbjct: 691 RRQNRQKDLFIMQHAFTTWVASRVIRKK 718 >gi|295094342|emb|CBK83433.1| prolyl-tRNA synthetase, family I [Coprococcus sp. ART55/1] Length = 477 Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 90/265 (33%), Gaps = 22/265 (8%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK----- 214 + + + + L Q +D G V P+L+ + + + Sbjct: 35 TNVKGCMAIKPAGYAIWELIQKQLDERFKATGVENVYMPMLIPESLLEKEKDHVEGFAPE 94 Query: 215 ----FADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 + T+ + PTSE + Y ++I + LP + R E + Sbjct: 95 VAWVTYGGLNPLTERMCVRPTSETLFCDFYKNDIQSYRDLPRVYNQWCSVMRWE-----K 149 Query: 271 DTRGMLRQHQFWKCE--LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 +TR LR +F E T EE + + A+ L + + Sbjct: 150 ETRPFLRSREFLWQEGHTAHATAEEAEARTIQMLNLYADFCEDVLAMPVIRGRKTEKEKF 209 Query: 329 FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH-TLNGSGV 387 A TY +E + + + G+ ++ ++ D ++K LK+ H T S Sbjct: 210 AGAEATYTIEALM-HDGKALQSGTSHNFGDGFAKAFGIQFTDKDNK-LKYVHQT---SWG 264 Query: 388 AVGRCLIAILENYLNADGSVTIPTV 412 R + AI+ + + G V P V Sbjct: 265 MTTRLIGAIIMVHGDNSGLVLPPKV 289 >gi|168187192|ref|ZP_02621827.1| prolyl-tRNA synthetase [Clostridium botulinum C str. Eklund] gi|169294885|gb|EDS77018.1| prolyl-tRNA synthetase [Clostridium botulinum C str. Eklund] Length = 478 Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 88/271 (32%), Gaps = 20/271 (7%) Query: 138 SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSA 197 + ++ + + ++ + Q +D E G+ V Sbjct: 13 PMDEDFAKWYTDIVKKAELVDYASVKGCMIIRPYGYAIWENIQKYLDNKFKETGHENVYM 72 Query: 198 PLLVRDEAMYGTGQIPK-FADDMFCTTD--------GRWLIPTSEVSLTNLYSHEIIESK 248 P+ + + + + FA ++ T + PTSE + Y+ I Sbjct: 73 PMFIPESLLQKEKDHVEGFAPEVAWVTQGGNDTLAERLCVRPTSETLFCDHYAKIIQSHN 132 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV--SITREEDSFTEHERMLSCA 306 LP ++ R E + TR LR +F E T EE + + + A Sbjct: 133 DLPKKYNQWCSVVRWE-----KTTRPFLRTTEFLWQEGHTAHATAEESARETIDMLNVYA 187 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 L + + A TY +E + + + G+ S+ N Sbjct: 188 NFCENVLAIPVIKGQKTEKEKFAGAKATYTIESLM-HDGKALQSGTSHNFGDNFSKAFNI 246 Query: 367 RYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 +Y D NS+ L++ H S R + AI+ Sbjct: 247 QYNDKNSQ-LQYVHQ--TSWGVTTRLIGAII 274 >gi|331090802|ref|ZP_08339649.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] gi|330399910|gb|EGG79569.1| threonyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] Length = 653 Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 57/182 (31%), Gaps = 16/182 (8%) Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF------CTTDGRWLI 229 Q ++ + GY PL+ + + + + + MF + + + Sbjct: 272 IQTMQRWVEDEEEKRGYVRTKTPLMAKKDLYVISDHWGHYKEGMFVLGDEDKEGEEVFAL 331 Query: 230 PTSEVSLTNL-YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 Y + LP R+ + FR+E + G+ R QF E Sbjct: 332 RPMTCPFQYYVYKQSQKSYRDLPCRYGETSTLFRNEDSG---EMHGLTRVRQFTISEGHL 388 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + E E + A+ L L + T L + D +L + ++ Sbjct: 389 VITPEQVEDEFRGCVDLAKYCLTTLGV----EEDVTYRLSLADPDNMD--KYLGTREMWD 442 Query: 349 EI 350 E+ Sbjct: 443 EV 444 >gi|323466103|gb|ADX69790.1| Threonyl-tRNA synthetase 1 [Lactobacillus helveticus H10] Length = 661 Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 72/191 (37%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 274 VGAGLPYWMPKGATIRRVVERYIIDREVAD-GYQHVYTPVLMNLDAYKTSGHWAHYRDDM 332 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S ++ H I + LPLR L R E A G Sbjct: 333 FPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 389 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + TE ++L ++ K D+ L D + Sbjct: 390 LQRVREMTLNDGHTFVALDQVQTEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTDKYF 449 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 450 ANDEMWEKSQK 460 >gi|89891844|ref|ZP_01203345.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7] gi|89515749|gb|EAS18550.1| threonyl-tRNA synthetase [Flavobacteria bacterium BBFL7] Length = 648 Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 46/164 (28%), Gaps = 9/164 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHE---- 243 + GY V +P + E +G K+ AD + + E Sbjct: 287 KAGYEMVVSPHIGSKELYVTSGHYEKYGADSFQPIKTPSDDEEFLLKPMNCPHHCEIYKS 346 Query: 244 -IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + LP RF +R E + G+ R F + + E E + + Sbjct: 347 SQWSYRDLPKRFAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCMPEQLDKEFKAV 403 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + L + D D + W +N Sbjct: 404 IDLVLYVFGSLGFENFTAQVSIRDPKKPEKYIGDTKNWEIAENA 447 >gi|15807075|ref|NP_295804.1| threonyl-tRNA synthetase [Deinococcus radiodurans R1] gi|22654147|sp|Q9RSP3|SYT_DEIRA RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|6459875|gb|AAF11630.1|AE002044_3 threonyl-tRNA synthetase [Deinococcus radiodurans R1] Length = 649 Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 51/157 (32%), Gaps = 10/157 (6%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-- 220 + G + E + + GY V P + + +G P +++ F Sbjct: 270 PLWLPNGTVLREE---LTNFMKEQQFQRGYQGVVTPNIGNLDLYRTSGHYPYYSESQFNP 326 Query: 221 -CTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + +++ +Y+ + + LP+R +R E + G+ R Sbjct: 327 IQVDEEEYMLKPMNCPHHVRIYASKPRSYRDLPVRLAEFGTVYRYEQSG---ELNGLTRV 383 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + R + E +L +LK + Sbjct: 384 RGFTQDDAHIFCRPDQLKREFLDVLDLTVLVLKTFGM 420 >gi|78060370|ref|YP_366945.1| threonyl-tRNA synthetase, class IIA [Burkholderia sp. 383] gi|77964920|gb|ABB06301.1| Threonyl-tRNA synthetase, class IIa [Burkholderia sp. 383] Length = 477 Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 56/184 (30%), Gaps = 19/184 (10%) Query: 157 TKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 + V + + + + G+ E+ P L+ +G KF Sbjct: 83 HQQQEGPGMVFWHPRGWALYRVLEDYVRMRMRRAGFREIRTPQLLARSLWERSGHWDKFG 142 Query: 217 DDMFCTTDGRWLIPTSEV-----------SLTNLYSHEIIE-----SKSLPLRFTTLAPS 260 M+ D + P+++V ++ ++ + LP+R++ Sbjct: 143 SQMYALPDRSPIEPSADVDHDDALALCLKPMSCPCHVQVFNQGLRSYRELPIRYSEFGAC 202 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVV 320 R E + G+ R F + + + E R + + L V Sbjct: 203 HRDEPSGSL---EGLKRTRAFVQDDAHVFCTKSQIENEVARFCNLLRAVYADLGFSSVTV 259 Query: 321 SLCT 324 +L T Sbjct: 260 ALAT 263 >gi|167957340|ref|ZP_02544414.1| glycyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7c] Length = 473 Score = 44.8 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 73/206 (35%), Gaps = 33/206 (16%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ TN + +LP +FR+E + R +F + E+ Sbjct: 191 TAQGIFTNFKNVVDSFYPNLPFGIAQQGKAFRNEIA----PRDFVFRSREFEQMEIEYFV 246 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 E + +L+ L L L H + + D + KT D+E Sbjct: 247 DPEHWQEAFDELLASTHAFLAELGLKPEHIHELDVPAEDRAHYSKKTIDIEYDYP--IGC 304 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-----------GVAVGRCLIAI 396 E+ + +F MN + + KS+++ T+ G+ V R L+A+ Sbjct: 305 EELMGIAYRTDFDL--MNI--QRASGKSMEY--TVKGTNTKFVPHVIEPSFGVERALMAV 358 Query: 397 L-----ENYLNADGSV--TIPTVLRP 415 L E+ N + V +P L P Sbjct: 359 LSGAYREDEQNGEKRVYLALPEHLAP 384 >gi|255730209|ref|XP_002550029.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240131986|gb|EER31544.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 455 Score = 44.8 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 100/327 (30%), Gaps = 72/327 (22%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 H + L QFM + T ++G+ EV PL+ + + +G + DDM Sbjct: 48 VSPGSIFFLPHGTRILNKLIQFMKNQQT-KYGFQEVITPLIFKTKLWKKSGHWDNYKDDM 106 Query: 220 FCT---------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 F L P + S +++ + LP+R++ + R+E Sbjct: 107 FKVVGNDLSKEEHTDNIEEHEYGLKPMNCPSHCMIFAKFDRSYQELPIRYSDFSSLHRNE 166 Query: 265 AGSAGRDTRGMLRQHQ-------------------------FWKCELVSITREEDSFTEH 299 A A + R HQ +K + S Sbjct: 167 ASGALSGLTRVRRFHQDDGHIFCSMSQIDQEIKNTLTLIKDTYKVFGIDDIEFYLSTRPE 226 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAG-----QNLYREISSCS 354 E+ + E K D V++ G+ G + + D + ++ + + Sbjct: 227 EKYIGDIETWNKAEDQLKNVLNSTAGE-GQWSIREGDGAFYGPKIDVLLKDAFGKKHQVG 285 Query: 355 TC-GNFQ-SRRMNSRYRDPNSKSLK---FTH-TLNGSGVAVGRCLIAILENYL------- 401 T +FQ R +Y + H + GS R +L++Y Sbjct: 286 TIQLDFQLPNRFELKYVGEDGNRDHQPILVHRAVYGSL---ERFFAILLDHYQGKWPFWI 342 Query: 402 NADGSVTIP---------TVLRPYMNN 419 N ++ IP L+ + Sbjct: 343 NPRQAIIIPINESHVQAAESLQQKLGG 369 >gi|260589680|ref|ZP_05855593.1| glycine--tRNA ligase [Blautia hansenii DSM 20583] gi|331083112|ref|ZP_08332229.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] gi|260539920|gb|EEX20489.1| glycine--tRNA ligase [Blautia hansenii DSM 20583] gi|330405114|gb|EGG84651.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] Length = 464 Score = 44.8 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 85/275 (30%), Gaps = 17/275 (6%) Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 E + + + +K + P + I + + +G + +E E A Sbjct: 40 ELKNNVKRAWWQKFVMESPYNVGVDCAILMNPQTWVASGHLGGFSDPLMDCKECHERFRA 99 Query: 148 LGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY 207 +++ A K SV A + + F+ + + + + + M+ Sbjct: 100 DKIIEDYCAEKGIAIEGSVD----AWSQEQMKDFIEEHQIPCPTCGKHNFTDIRQFNLMF 155 Query: 208 GTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 T Q +D T T++ N + + K LP + SFR+E Sbjct: 156 KTFQ--GVTEDAKNT--VYLRPETAQGIFVNFKNVQRTSRKKLPFGIAQIGKSFRNEI-- 209 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD- 326 R +F + EL + + + L L L + D Sbjct: 210 --TPGNFTFRTREFEQMELEFFCKPDTDLEWFAYWKQFCLDWLHSLGLKDEEIRYRDHDK 267 Query: 327 --LGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 L F + T D+E + E+ + ++ Sbjct: 268 EELSFYSKATTDVEFLFPF--GWGELWGIADRTDY 300 >gi|58700029|ref|ZP_00374583.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533457|gb|EAL57902.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] Length = 121 Score = 44.8 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 7/113 (6%) Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +++ + LP+R R+E+ + G++R F + + EE Sbjct: 1 MQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLH---GLMRVRGFTQDDAHIFCMEEQVN 57 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 +E + +E+ L + V + D EVW + E Sbjct: 58 SETIKFCDLLKEVYSELGFNEISVKFSDR----PDVRAGDDEVWDRAEKALLE 106 >gi|313126275|ref|YP_004036545.1| ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] gi|312292640|gb|ADQ67100.1| Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] Length = 641 Score = 44.8 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 110/344 (31%), Gaps = 25/344 (7%) Query: 22 HLEPQSEYILSLDEKN-----------RILIKKIEDIR-ARRNSNSAQIGQAIAEGNLSL 69 +++ ++ + +++++ R L + + + N I + A G+ L Sbjct: 110 NVDLDADDLEAIEDEMEEIIEEDLPVERELRSREDALELYEENPYKRDILENEAAGDDEL 169 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 ++ E L + + + L + E + Sbjct: 170 SFYVQGEFEDLCKGPHVESTGKIGAVELLNISSAYWRGD-EENETLTRVYGTAFESEKDL 228 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 K+ + E + + MD +++G + + + L +F L+ + Sbjct: 229 KEYMELRAEAEERDHRKIGREMDLFSIPEVTGPGLPLYHPNGKRILSELSEFAESLNL-D 287 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---CTTDGRWLIPTSEVSLTNLYSHEIIE 246 Y V P L R E +G + DDMF + L P + ++ Sbjct: 288 ADYEPVETPHLFRTELWKKSGHYDNYVDDMFLLDVNDEEYGLKPMNCPGHATIFDQNSWS 347 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R+ +R E + G+ R F + R E E ++++ Sbjct: 348 YRDLPVRYFEDGKVYRKEQ---RGELSGLSRVWSFTIDDGHLFCRPEQIEQEIRQVMNSI 404 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 E+L L V + + E+W ++ R + Sbjct: 405 YEVLDTFGLEAHVALATRPEKSVGSD-----EIWEQSESQLRSV 443 >gi|150866832|ref|XP_001386559.2| prolyl-tRNA synthetase, cytoplasmic [Scheffersomyces stipitis CBS 6054] gi|149388088|gb|ABN68530.2| prolyl-tRNA synthetase, cytoplasmic [Scheffersomyces stipitis CBS 6054] Length = 572 Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 5/164 (3%) Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG 225 V + +I E + EV LL + TG+ ++ + Sbjct: 49 VNWSPIGLTIMNKISDIIRRRMDEISFEEVKLSLLSHHSSWRKTGRWDNSSELFKLKGEE 108 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 L PT+E + N S+ K+LPL + + P FR+E R G+LR +F + Sbjct: 109 YILSPTAEEDIVNYVSNNSSSYKNLPLLYYQINPKFRNEK----RPRGGLLRGKEFMMKD 164 Query: 286 LVSITREE-DSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 S E D+ T ++ ++ +I L L Y +GD+G Sbjct: 165 AYSFDASEKDAMTTYQSVIGAYTKIFGDLKLPYTKAEADSGDIG 208 >gi|296213991|ref|XP_002753524.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Callithrix jacchus] gi|296213993|ref|XP_002753525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Callithrix jacchus] Length = 1118 Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAIEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGSML 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++ + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKIQKSNGEKNENCENKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 + I P EA D K G V Sbjct: 210 YLDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|302346317|ref|YP_003814615.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845] gi|302150675|gb|ADK96936.1| threonine--tRNA ligase [Prevotella melaninogenica ATCC 25845] Length = 649 Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 95/350 (27%), Gaps = 30/350 (8%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IGQAIAEGNLSLVDALKNETST 79 ++EK R L KK E + R S + + A+G V+ + Sbjct: 111 GQTISENDFPKIEEKMRELAKKNEQV--VRRDVSKADAVKEFTADGQEYKVEHI---VED 165 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPN------VPLEEVPIGTSANENILIRSVGKKPS 133 L++ + + + + A + R G Sbjct: 166 LEDGTISTYSQGNFTDLCRGPHLVSTGAIKAVKITSVAGAFWRGDAKREQMTRIYGITFP 225 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFS---VLTGHLAHLERALGQFMIDLHTS-- 188 + E+ E+ E D + K V G L + + Sbjct: 226 KKKMLDEYLEMLEEAKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRR 285 Query: 189 ---EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNL 239 + Y EV P + +G + D F L P + + Sbjct: 286 LLRPYNYQEVITPGIGGKNLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEI 345 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+H+ K LPLR FR E + G+ R F + + R + E Sbjct: 346 YAHKPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVRPDQVKAEF 402 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E + ++ K + D EVW + +E Sbjct: 403 ENNIDIILKVFKTFGFDNYEAQISLRDPEDKEKYIGSDEVWEESEAAIKE 452 >gi|114587775|ref|XP_001136134.1| PREDICTED: TATA element modulatory factor 1 isoform 1 [Pan troglodytes] Length = 1004 Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 525 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 584 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V L + L+E+L L++ K+ I Sbjct: 585 ENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 626 >gi|320528406|ref|ZP_08029568.1| threonyl-tRNA synthetase [Solobacterium moorei F0204] gi|320131320|gb|EFW23888.1| threonyl-tRNA synthetase [Solobacterium moorei F0204] Length = 591 Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 87/265 (32%), Gaps = 17/265 (6%) Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 K + N +L R G H E D + K Sbjct: 130 TKNCRYFKLIKHSGAYWKGDKNNKVLQRIYGVCLPTQEELDSHLADLEDAKQRDHRKLGK 189 Query: 159 ---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 + G + + + R L ++++ GY V P + + + Sbjct: 190 DMQIFMFSDIVGGGLPLWLPNGLTVRRLLSDYIMNKEL-ARGYQHVLTPSVASTKLYKIS 248 Query: 210 GQIPKFADDMFCTT----DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEA 265 G + + DDMF D L P + +Y ++ + LP+R +A FR EA Sbjct: 249 GHLAHYKDDMFPIMSRDDDEFVLRPMNCPEHMIIYKSQLHSYRDLPIRIAEIANDFRFEA 308 Query: 266 GSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG 325 A G+ R F + + EE +E + + ++ K +L+ L Sbjct: 309 SGALT---GIERSRAFTQNDSHIFCTEEQIASEIKAVTELILDVYKDFNLNQFEFRLSLR 365 Query: 326 DLGFSACKTYDLEVWLAGQNLYREI 350 D + + ++W ++ RE+ Sbjct: 366 DKENTEKYFGNDDLWERSESELREV 390 >gi|296225636|ref|XP_002758585.1| PREDICTED: TATA element modulatory factor [Callithrix jacchus] Length = 1096 Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 528 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 587 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + + L + L+E+L L++ K+ I Sbjct: 588 ENENMIAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 629 >gi|67971912|dbj|BAE02298.1| unnamed protein product [Macaca fascicularis] Length = 774 Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 524 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 583 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V L + L+E+L L++ K+ I Sbjct: 584 ENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 625 >gi|320586315|gb|EFW98994.1| threonyl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 524 Score = 44.8 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 26/153 (16%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL--------- 236 +G+ EV P + + +G + +ADDMF T Sbjct: 117 QYVRYGFQEVITPTIYKKALWAKSGHLENYADDMFTVTSASLATGERRGEGGATPGPQDL 176 Query: 237 --------------TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 +++ + + LP+R+ +P R E A G+ R +F Sbjct: 177 EDEYGLKPMNCPGHCLIFAAQRHSYRDLPIRYADFSPLHRDELSGALS---GLTRVRRFH 233 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + R + E L L L Sbjct: 234 QDDGHVFCRPDQVEAEIRATLDFVRHTYDVLGL 266 >gi|316933337|ref|YP_004108319.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] gi|315601051|gb|ADU43586.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] Length = 693 Score = 44.8 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 89/297 (29%), Gaps = 36/297 (12%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI---GQAIA----EGNLSLVD-- 71 R+ E ++++K R +I AR + ++ +A G V+ Sbjct: 139 RNEPFTPEDFAAIEKKMREII-------ARDKPFTKEVWTRDEAKKVFADNGEAFKVELV 191 Query: 72 ALKNETSTLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 A E T+K +Q + +S K+ + + + +N +L R G Sbjct: 192 AAIPEDQTIKIYKQGEWFDLCRGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYG 251 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS- 188 + + E D + + G A G + Sbjct: 252 TAWAKQEDLDAYLHQIEEAEKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWSLFQSLVGY 311 Query: 189 -----EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEV 234 Y EV+AP ++ +G + ++MF L P + Sbjct: 312 MRRRLAGDYDEVNAPQILDKVLWETSGHWEWYRENMFAAQSAGEDAEDKRWFALKPMNCP 371 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ H + + LPLR R E A G++R F + + Sbjct: 372 GHVQIFKHGLKSYRDLPLRMAEFGVVHRYEPSGA---MHGLMRVRGFTQDDAHVFCT 425 >gi|195587264|ref|XP_002083385.1| GD13380 [Drosophila simulans] gi|194195394|gb|EDX08970.1| GD13380 [Drosophila simulans] Length = 458 Score = 44.8 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 103/298 (34%), Gaps = 47/298 (15%) Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K + + + + G +++ P+L TG++ Sbjct: 40 KSGSNGTYQIMPMAQRSVDKCIDL-VQSNMQQAGGQKITLPILTPTGLWKKTGRLEGDIS 98 Query: 218 DMFCTTDGRW----LIPTSEVSLTNLYSHE-IIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + + D + PT E ++T + + I + LPLR + P FR E + Sbjct: 99 EFYMVRDRSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFRDELKTRF--- 155 Query: 273 RGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG--- 328 G++R +F ++ + E+S + + S + + K+L++ + V+ TG +G Sbjct: 156 -GLMRAKEFLMKDMYTFDVSEESARETYSVVNSAYDRLFKQLEVPFVKVNAATGMMGGSV 214 Query: 329 -----------------------FSACKTYDLEVWLAGQN-------LYREISSCSTCGN 358 + N E++ G+ Sbjct: 215 SHEYHYVSPVGEDNLLQCSSCGFAGNSEVVTAPARCPSCNSSDLKEVRGVEVAHTFLLGD 274 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 S+ + + + + + K + G+ + R + A LE L++D + P +L PY Sbjct: 275 KYSKPLGATFLNTSGKPQSLV--MGCYGIGITRVIAAALE-VLSSDHELRWPKLLAPY 329 >gi|241948445|ref|XP_002416945.1| threonyl-trna synthetase, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223640283|emb|CAX44533.1| threonyl-trna synthetase, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 455 Score = 44.8 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 93/295 (31%), Gaps = 60/295 (20%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + H + L QFM + T ++G+ EV PL+ + + +G + DDM Sbjct: 48 TSPGSIFFLPHGTRILNKLIQFMKNQQT-KYGFQEVVTPLIFKTKLWKKSGHWDNYKDDM 106 Query: 220 FCT---------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 F L P + S +++ + LP+R++ + R+E Sbjct: 107 FKVVGNDITKEEHTDNIEEHEYGLKPMNCPSHCMIFAKFDRSYQELPVRYSDFSSLHRNE 166 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAE----------------- 307 A A G+ R +F + + + E + L + Sbjct: 167 ASGALS---GLTRVRRFHQDDGHIFCSMDQIDGEIKNTLDLIKDTYNVFGINEIEFYLST 223 Query: 308 ----------EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAG-----QNLYREISS 352 + +L + V T G + + D + ++ + + Sbjct: 224 RPEDKFIGNIDTWDIAELQLKNVLNATAGEGNWSIREGDGAFYGPKIDVLLKDAFNKKHQ 283 Query: 353 CSTC-GNFQ-SRRMNSRYRDPNSKSLK---FTH-TLNGSGVAVGRCLIAILENYL 401 T +FQ R +Y + K H + GS R +L++Y Sbjct: 284 VGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFGSL---ERFFAILLDHYQ 335 >gi|332654830|ref|ZP_08420572.1| glycine--tRNA ligase [Ruminococcaceae bacterium D16] gi|332516173|gb|EGJ45781.1| glycine--tRNA ligase [Ruminococcaceae bacterium D16] Length = 478 Score = 44.8 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 63/191 (32%), Gaps = 13/191 (6%) Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT 231 A + + F+ + + + + + + M+ T Q +D T T Sbjct: 123 AFSQEEMKNFIEEKNIPCPTCGKHNFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPET 178 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ N + + K LP + SFR+E R +F + EL + Sbjct: 179 AQGIFVNFQNVQRTTRKKLPFGVCQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCK 234 Query: 292 EEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + S + L L++ H R+ +L F + T D E + Sbjct: 235 PGTDMEWFQYWRSFCRDWLLNLNMKEEHLRLRDHSPEELCFYSKGTTDFEFLFPF--GWG 292 Query: 349 EISSCSTCGNF 359 E+ + ++ Sbjct: 293 ELWGVADRTDY 303 >gi|297663737|ref|XP_002810324.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase, mitochondrial-like [Pongo abelii] Length = 719 Score = 44.8 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 62/211 (29%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 319 SPGSCFFLPRGTRVYNALVAFIRAEYA-RRGFSEVKTPTLFSTKLWKQSGHWEHYQEDMF 377 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 378 AVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 437 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK--RLDLHYR 318 R+EA G+ R F + + + E + L + H Sbjct: 438 HRAEASGGL---GGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFHLA 494 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 495 LSTRPSGFLGDPCLWDQAEQVLKQALKEFGE 525 >gi|160940874|ref|ZP_02088214.1| hypothetical protein CLOBOL_05766 [Clostridium bolteae ATCC BAA-613] gi|158436118|gb|EDP13885.1| hypothetical protein CLOBOL_05766 [Clostridium bolteae ATCC BAA-613] Length = 462 Score = 44.8 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 13/190 (6%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 + + Q++ D + + + M+ T Q +D T T+ Sbjct: 121 WSQEQMKQYIDDNNICCPSCGAHDFTDIRQFNLMFKTFQ--GVTEDAKST--VYLRPETA 176 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + + K +P + SFR+E R +F + EL + Sbjct: 177 QGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKP 232 Query: 293 EDSFTEHERMLSCAEEILKRL---DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + L+ L D R +L F + T DLE + E Sbjct: 233 DTDLEWFAYWKEFCINWLRSLGIKDDELRARDHSPEELSFYSKATTDLEYLFPF--GWGE 290 Query: 350 ISSCSTCGNF 359 + + ++ Sbjct: 291 LWGIADRTDY 300 >gi|328464763|gb|EGF36081.1| threonyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463] Length = 644 Score = 44.8 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 72/191 (37%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 257 VGAGLPYWMPKGATIRRVVERYIIDREVAD-GYQHVYTPVLMNLDAYKTSGHWAHYRDDM 315 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S ++ H I + LPLR L R E A G Sbjct: 316 FPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 372 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + TE ++L E+ K D+ L D + Sbjct: 373 LQRVREMTLNDGHTFVVLDQVQTEFAKILKLIMEVYKDFDITDYYFRLSYRDPKNTDKYF 432 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 433 ANDEMWEKSQK 443 >gi|224084618|ref|XP_002307361.1| predicted protein [Populus trichocarpa] gi|222856810|gb|EEE94357.1| predicted protein [Populus trichocarpa] Length = 166 Score = 44.8 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 28/49 (57%) Query: 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + LI T+E+ + ++ I+ LPL++ + FR+EAG+A TR Sbjct: 60 DQCLIGTAEIPVGGIHMDAILAESLLPLKYVAFSHCFRTEAGAADTATR 108 >gi|24656200|ref|NP_647737.1| Prolyl-tRNA synthetase [Drosophila melanogaster] gi|7292265|gb|AAF47674.1| Prolyl-tRNA synthetase [Drosophila melanogaster] Length = 458 Score = 44.8 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 108/298 (36%), Gaps = 47/298 (15%) Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K + + + + G +++ P+L TG++ Sbjct: 40 KSGSNGTYQIMPMAQRSVDKCIDL-VQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDIS 98 Query: 218 DMFCTTDGRW----LIPTSEVSLTNLYSHE-IIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + + D + PT E ++T + + I + LPLR + P FR E + Sbjct: 99 EFYMVRDRSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFRDELKTRF--- 155 Query: 273 RGMLRQHQFWKCELVSIT-REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 G++R +F ++ S EE + + + + + + K+L++ + V+ TG +G S Sbjct: 156 -GLMRAKEFLMKDMYSFDVSEETAMETYTLVNAAYDRLFKQLEVPFVKVNAATGIMGGSV 214 Query: 332 CKTY--------DLEVWLAGQNLYR--EIS----SCSTC-------------------GN 358 Y D + + E+ SC +C G+ Sbjct: 215 SHEYHYVSPVGEDNLLQCSSCGFAGNSEVVKAPASCPSCNSSDLKEVRGVEVAHTFLLGD 274 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 S+ + + + + K + G+ + R + A LE L++D + P +L PY Sbjct: 275 KYSKPLGATFLNTTGKPQSLV--MGCYGIGITRVIAAALE-VLSSDHELRWPKLLAPY 329 >gi|260103159|ref|ZP_05753396.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|260083018|gb|EEW67138.1| threonine-tRNA ligase [Lactobacillus helveticus DSM 20075] Length = 644 Score = 44.8 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 72/191 (37%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 257 VGAGLPYWMPKGATIRRVVERYIIDREVAD-GYQHVYTPVLMNLDAYKTSGHWAHYRDDM 315 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S ++ H I + LPLR L R E A G Sbjct: 316 FPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 372 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + TE ++L E+ K D+ L D + Sbjct: 373 LQRVREMTLNDGHTFVVLDQVQTEFAKILKLIMEVYKDFDITDYYFRLSYRDPKNTDKYF 432 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 433 ANDEMWEKSQK 443 >gi|323142407|ref|ZP_08077233.1| threonine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] gi|322413100|gb|EFY03993.1| threonine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] Length = 597 Score = 44.8 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 10/147 (6%) Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT--SE 233 L Q ++ + GY PL+ + + +G + D MF D + Sbjct: 223 IQLLQRWVEDVEQKRGYLLTKTPLMAKRDLYRISGHWDHYLDGMFILGDPHDETKECFAL 282 Query: 234 VSLTNLYSHE-----IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 +T + ++ + LP+R + FR+E + G++R QF E Sbjct: 283 RPMTCPFQYQVFLNRQRSYRELPMRLGETSTLFRNEDSG---EMHGLIRVRQFTISEGHL 339 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDL 315 I R + E + L A+ L+ + + Sbjct: 340 ILRPDQLEEEFKGCLDLAKYCLETVGM 366 >gi|27820035|gb|AAO25049.1| GM03563p [Drosophila melanogaster] Length = 458 Score = 44.8 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 109/298 (36%), Gaps = 47/298 (15%) Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K + + + + G +++ P+L TG++ Sbjct: 40 KSGSNGTYQIMPMAQRSVDKCIDL-VQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDIS 98 Query: 218 DMFCTTDGRW----LIPTSEVSLTNLYSHE-IIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + + D + PT E ++T + + I + LPLR + P FR E + Sbjct: 99 EFYMVRDRSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFRDELKTRF--- 155 Query: 273 RGMLRQHQFWKCELVSIT-REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 G++R +F ++ S EE + + + + + + K+L++ + V+ TG +G S Sbjct: 156 -GLMRAKEFLMKDMYSFDVSEETAMETYTVVNAAYDRLFKQLEVPFVKVNAATGIMGGSV 214 Query: 332 CKTY--------DLEVWLAGQNLYR--EIS----SCSTC-------------------GN 358 Y D + + E+ SC +C G+ Sbjct: 215 SHEYHYVSPVGEDNLLQCSSCGFAGNSEVVKAPASCPSCNSSDLKEVRGVEVAHTFLLGD 274 Query: 359 FQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 S+ + + + + + K + G+ + R + A LE L++D + P +L PY Sbjct: 275 KYSKPLGATFLNTSGKPQSLV--MGCYGIGITRVIAAALE-VLSSDHELRWPKLLAPY 329 >gi|322795753|gb|EFZ18432.1| hypothetical protein SINV_09362 [Solenopsis invicta] Length = 1521 Score = 44.8 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 10/92 (10%) Query: 19 KKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AEGNLS 68 K R L+ + + L+ + L + ++ N+ +IG+ Sbjct: 456 KLRGQLDDAEDRVKLLEAQIASLQTDKDRMQNEINALQNEIGKLKLDLSSETVAKRDIQE 515 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ALKNE L ++ ++ + H + Sbjct: 516 ELAALKNEMKNLISKIDEMKVQSHVLKEERDA 547 >gi|325107787|ref|YP_004268855.1| glycyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] gi|324968055|gb|ADY58833.1| glycyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] Length = 553 Score = 44.8 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 46/137 (33%), Gaps = 9/137 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + LP + SFR+E R +F + E+ Sbjct: 235 TAQGMFVNFKNVVDSSRVKLPFGICQIGKSFRNEI----TPRNFTFRSREFEQMEIEFFC 290 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLA--GQN 345 R ++S ++ + + L + ++ +L + T D+E Sbjct: 291 RPDESANWYQYWRNRRFQWYTDLGIASDKLQLREHHKEELAHYSVGTADIEYAFPFLSPG 350 Query: 346 LYREISSCSTCGNFQSR 362 Y E+ + G+F R Sbjct: 351 DYGELEGVAHRGDFDLR 367 >gi|319935432|ref|ZP_08009869.1| glycyl-tRNA synthetase [Coprobacillus sp. 29_1] gi|319809648|gb|EFW06061.1| glycyl-tRNA synthetase [Coprobacillus sp. 29_1] Length = 458 Score = 44.8 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 13/186 (6%) Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP-TSEVSL 236 + +++ D H + E M+ T + + + +L P T++ Sbjct: 121 MMEYIRDHHIKCPDCGSEDFTDIREFELMFKT-----YMGVVKDAKNVVYLRPETAQGIF 175 Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 N + + K +P + SFR+E + R +F + EL + + Sbjct: 176 VNFKNIQRTSRKKVPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFCKPDTDL 231 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLYREISSC 353 + LK L L + +L F + T D+E + E+ Sbjct: 232 DWFHYWKDGCMQFLKDLGLTSENLRFRDHEQEELSFYSKATSDIEYLYPAPLGWGELWGV 291 Query: 354 STCGNF 359 + ++ Sbjct: 292 ADRTDY 297 >gi|258578341|ref|XP_002543352.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704] gi|237903618|gb|EEP78019.1| threonyl-tRNA synthetase [Uncinocarpus reesii 1704] Length = 653 Score = 44.8 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 81/268 (30%), Gaps = 24/268 (8%) Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 G S L L + +PL + Sbjct: 109 AGISSSGQESIARMRRLNVATRALRSVRTRPTAQRHTQWGAHRILPLSTTRACSCTAPKP 168 Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 PSA + +H IG A L AT L + + H+ L F+ Sbjct: 169 SEPCDRTTPSASTPAPDHRTIGAAQDLF----ATSLYSPGSPLFQPNGTHILNKLLAFLR 224 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----------------DGRW 227 ++G+ EV P + + +G + DDM+ + Sbjct: 225 -AQYRQYGFQEVLTPTIYKKSLWELSGHWQNYKDDMYEVRGRGATGETTHGEIGEDESYG 283 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L P + L+ + + LP+R+ +P R+E + G+ R +F + + Sbjct: 284 LKPMNCPGHCLLFKSQKWSYRDLPVRYADFSPLHRNEVSGSLS---GLTRVRRFHQDDGH 340 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDL 315 R + E + L + ++K L Sbjct: 341 IFCRPQQIGREIQLALKFTDTVMKTFGL 368 >gi|295425303|ref|ZP_06818006.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] gi|295065079|gb|EFG55984.1| threonine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] Length = 659 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 272 VGAGLPYWMPKGATIRRVVERYIIDREVAD-GYQHVYTPVLMNLDAYKTSGHWAHYRDDM 330 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S ++ H I + LPLR L R E A G Sbjct: 331 FPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 387 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + E ++L ++ K D+ L D + Sbjct: 388 LQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTQKYF 447 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 448 ANDEMWERSQK 458 >gi|194246566|ref|YP_002004205.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma mali] gi|254783531|sp|B3R0I8|SYT_PHYMT RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|193806923|emb|CAP18352.1| Threonyl-tRNA synthetase [Candidatus Phytoplasma mali] Length = 640 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 77/213 (36%), Gaps = 9/213 (4%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + ++F ++ G + + R + ++++D GY V P++ Sbjct: 240 DHKYINKDLNFFMLSQEVGLGLPFWLSKGSTIRRIIERYIVDKELIG-GYEHVYTPVIAN 298 Query: 203 DEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH-----EIIESKSLPLRFTTL 257 +G + + D+MF + + + +I K LP+R L Sbjct: 299 INIYSTSGHLEHYRDNMFPAMNMPNGEKYVLRPMNCPHHMMIYKNKIYSYKELPIRIAEL 358 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 R E A G+ R + + R + E +++++ +E+ + D++ Sbjct: 359 GMMHRLEKSGA---VSGLERVREMTLNDAHIFIRTDQIKEEFKKIVNFIQEVYRDFDINN 415 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREI 350 + L D D E+W +N+ +EI Sbjct: 416 YIFRLSYRDPLDKKKYFNDDEMWNKAENILKEI 448 >gi|320165002|gb|EFW41901.1| Tarsl2 protein [Capsaspora owczarzaki ATCC 30864] Length = 777 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 100/361 (27%), Gaps = 89/361 (24%) Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + + + R+H IG A L F + S Sbjct: 298 PLQRVYGISFPKAAMLKEWVTAREEAKLRDHRLIGAAQQLFMFHPYSPGSAFMLPHGMKI 357 Query: 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 ++ L Q I L +GY EVS P++ E +G + +A DMF T G Sbjct: 358 ISRL-----QEYIRLAYIHYGYQEVSTPIVYSKELWETSGHLQHYAQDMFAVTGGLTPAA 412 Query: 231 TSEVSL-------------------------------TNLYSHEIIESKSLPLRFTTLAP 259 + + ++ + + LP+R +P Sbjct: 413 PAAGAAAGAAGHSHHHADSDASSDATQALKPMNCPGHCLIFQRKHYSYRELPIRLADFSP 472 Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH--- 316 R+EA A G+ R +F + + E E +L E+ RL Sbjct: 473 LHRNEAKGALS---GLTRVRRFHQDDAHIFCTPEQIQAEILNVLGFVREVYGRLGFSEFT 529 Query: 317 ----------------YRVVSLCTGDLGFSACKTYDLEVWLAGQNLY------------- 347 + C D G + Sbjct: 530 LKLSTRPESFVGSIEQWDYAESCLKD--ALQQTCGSNWTLNPGDGAFYGPKIDITIRDAI 587 Query: 348 -REISSCSTCGNFQ-SRRMNSRYRDPNSKSLKFTHT-------LNGSGVAVGRCLIAILE 398 R+ + + +FQ +R RY D N + HT + GS R ++E Sbjct: 588 GRQHQTATVQLDFQLPQRFGLRYFDANQQ----AHTPVMIHRAVLGSL---ERMFAILIE 640 Query: 399 N 399 N Sbjct: 641 N 641 >gi|295664016|ref|XP_002792560.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226278674|gb|EEH34240.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 559 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 19/143 (13%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL------------ 236 ++G+ EV P + + +G + DDM+ T+E + Sbjct: 118 QYGFREVLTPSIYKKSLWEVSGHWQNYKDDMYEVRGRGASGETAEGEIGEDESYGLKPMN 177 Query: 237 ----TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 L+ + + LPLR+ +P R+E + G+ R +F + + R Sbjct: 178 CPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLS---GLTRVRRFHQDDGHIFCRP 234 Query: 293 EDSFTEHERMLSCAEEILKRLDL 315 + +E E L + ++ Sbjct: 235 QQIGSEIESALRFTDTVMNTFGF 257 >gi|223985700|ref|ZP_03635747.1| hypothetical protein HOLDEFILI_03053 [Holdemania filiformis DSM 12042] gi|223962311|gb|EEF66776.1| hypothetical protein HOLDEFILI_03053 [Holdemania filiformis DSM 12042] Length = 458 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 42/328 (12%), Positives = 89/328 (27%), Gaps = 38/328 (11%) Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 LK+ + + + S + + +V + + + + Sbjct: 41 ELKDNIKRA-WWKKFIQSHPNNVGIQAAILMNPKVWEASGHLKGFSDPLMDCRHCKTRHR 99 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 +H G + + G + + A T + + Sbjct: 100 ADHLIEEATEGKVVPE------GWSNEKMMDFIKENHIACPNCGSHDFTDIRQFNLMFKT 153 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 E T + T++ N + + + LP + Sbjct: 154 FQGILEDAKSTIYLRPE---------------TAQGMFVNFKNVQRSMRRKLPFGIGQIG 198 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL--- 315 SFR+E + R +F + E+ + + +E + L L L Sbjct: 199 KSFRNEI----TPGNFIFRTREFEQMEMEFFCKPGEDLQWYEYWKNFCMNWLTNLGLNAE 254 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF-----QSRRMN-SRYR 369 R +L F + T D+E + E+ + ++ Q Y Sbjct: 255 SLRFREHTPEELAFYSKGTSDIEYLFPF--GWGELWGIADRTDYDLKTHQEHSGESLEYL 312 Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 DP + + + V V R ++A L Sbjct: 313 DPQTNEKYLPYCV-EPAVGVERLMLAFL 339 >gi|219518019|gb|AAI43841.1| TMF1 protein [Homo sapiens] Length = 1096 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 528 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 587 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V L + L+E+L L++ K+ I Sbjct: 588 ENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 629 >gi|62087798|dbj|BAD92346.1| TATA element modulatory factor 1 variant [Homo sapiens] Length = 1096 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 528 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 587 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V L + L+E+L L++ K+ I Sbjct: 588 ENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 629 >gi|298373605|ref|ZP_06983594.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] gi|298274657|gb|EFI16209.1| threonine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] Length = 650 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 48/167 (28%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADD-----MFCTTDGRWLIPTSEVSL-TNLYSH 242 +GY +V P + + +G K+ D +L+ +Y Sbjct: 291 RYGYQQVITPHIGAKQLYVTSGHWAKYGKDSFQPIQTPEEGEEYLLKPMNCPHHCEIYKS 350 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LP R +R E + G+ R F + + R + E ++ Sbjct: 351 TPKSYKDLPFRVAEFGTVYRYEQSG---ELHGLTRVRSFTQDDAHLFCRPDQIKEEFIKV 407 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + I K L + D E W +N E Sbjct: 408 MEIILIIFKALRFDNFEAQISLRDKVDREKYIGSDENWEKAENAIIE 454 >gi|114559283|ref|XP_001168777.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 3 [Pan troglodytes] Length = 666 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 266 SPGSCFFLPRGTRVYNALVAFIRAEYAH-RGFSEVKTPTLFSTKLWEQSGHWEHYQEDMF 324 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 325 AVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 384 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA G+ R F + + + E + L + L +R Sbjct: 385 HRAEASGGL---GGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA 441 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 442 LSTRPSGFLGDPCLWDQAEQVLKQALKEFGE 472 >gi|114559277|ref|XP_001168750.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 2 [Pan troglodytes] Length = 635 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 235 SPGSCFFLPRGTRVYNALVAFIRAEYAH-RGFSEVKTPTLFSTKLWEQSGHWEHYQEDMF 293 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 294 AVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 353 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA G+ R F + + + E + L + L +R Sbjct: 354 HRAEASGGL---GGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA 410 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 411 LSTRPSGFLGDPCLWDQAEQVLKQALKEFGE 441 >gi|114559273|ref|XP_001168878.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 6 [Pan troglodytes] Length = 684 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNALVAFIRAEYAH-RGFSEVKTPTLFSTKLWEQSGHWEHYQEDMF 376 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 377 AVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 436 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA G+ R F + + + E + L + L +R Sbjct: 437 HRAEASGGL---GGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA 493 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 494 LSTRPSGFLGDPCLWDQAEQVLKQALKEFGE 524 >gi|114559279|ref|XP_001168807.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 4 [Pan troglodytes] Length = 657 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 257 SPGSCFFLPRGTRVYNALVAFIRAEYAH-RGFSEVKTPTLFSTKLWEQSGHWEHYQEDMF 315 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 316 AVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 375 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA G+ R F + + + E + L + L +R Sbjct: 376 HRAEASGGL---GGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA 432 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 433 LSTRPSGFLGDPCLWDQAEQVLKQALKEFGE 463 >gi|114559269|ref|XP_001168944.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 9 [Pan troglodytes] Length = 718 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNALVAFIRAEYAH-RGFSEVKTPTLFSTKLWEQSGHWEHYQEDMF 376 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 377 AVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 436 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA G+ R F + + + E + L + L +R Sbjct: 437 HRAEASGGL---GGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA 493 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 494 LSTRPSGFLGDPCLWDQAEQVLKQALKEFGE 524 >gi|62897187|dbj|BAD96534.1| threonyl-tRNA synthetase-like 1 variant [Homo sapiens] Length = 718 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNALVAFIRAEYAH-RGFSEVKTPTLFSTKLWEQSGHWEHYQEDMF 376 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 377 AVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 436 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA G+ R F + + + E + L + L +R Sbjct: 437 HRAEASGGL---GGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA 493 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 494 LSTRPSGFLGDPCLWDQAEQVLKQALKEFGE 524 >gi|39644807|gb|AAH07824.2| TARS2 protein [Homo sapiens] Length = 709 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 309 SPGSCFFLPRGTRVYNALVAFIRAEYAH-RGFSEVKTPTLFSTKLWEQSGHWEHYQEDMF 367 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 368 AVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 427 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA G+ R F + + + E + L + L +R Sbjct: 428 HRAEASGGL---GGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA 484 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 485 LSTRPSGFLGDPCLWDQAEQVLKQALKEFGE 515 >gi|20070344|ref|NP_079426.2| threonyl-tRNA synthetase, mitochondrial precursor [Homo sapiens] gi|74752395|sp|Q9BW92|SYTM_HUMAN RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor gi|12802990|gb|AAH00541.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|14603040|gb|AAH09997.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|55958996|emb|CAI15488.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|119573933|gb|EAW53548.1| threonyl-tRNA synthetase-like 1, isoform CRA_a [Homo sapiens] gi|168275836|dbj|BAG10638.1| threonyl-tRNA synthetase [synthetic construct] Length = 718 Score = 44.8 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNALVAFIRAEYAH-RGFSEVKTPTLFSTKLWEQSGHWEHYQEDMF 376 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 377 AVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 436 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA G+ R F + + + E + L + L +R Sbjct: 437 HRAEASGGL---GGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA 493 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 494 LSTRPSGFLGDPCLWDQAEQVLKQALKEFGE 524 >gi|332231468|ref|XP_003264919.1| PREDICTED: TATA element modulatory factor [Nomascus leucogenys] Length = 1093 Score = 44.8 bits (104), Expect = 0.032, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 525 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 584 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V L + L+E+L L++ K+ I Sbjct: 585 ENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 626 >gi|114587771|ref|XP_526227.2| PREDICTED: TATA element modulatory factor isoform 3 [Pan troglodytes] Length = 1093 Score = 44.8 bits (104), Expect = 0.032, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 525 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 584 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V L + L+E+L L++ K+ I Sbjct: 585 ENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 626 >gi|221054768|ref|XP_002258523.1| prolyl-t-rna synthase [Plasmodium knowlesi strain H] gi|193808592|emb|CAQ39295.1| prolyl-t-rna synthase, putative [Plasmodium knowlesi strain H] Length = 552 Score = 44.4 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 81/211 (38%), Gaps = 16/211 (7%) Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 T K +D + L N +E I +KSLPL FR+E Sbjct: 196 TVMTKKKMEDDGLILSP--TCEEQAICLINQVYNENIPAKSLPLLIHQFNYKFRNEK--- 250 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEEILKRLDLHYRVVSLCTGD- 326 R + + + +F + S + ++ C +I L L ++V D Sbjct: 251 -RLEKTLFKSKEFLMKDGYSFHSNDICLNETYDSYKECYGKIFSDLKLPFKVTKKRKMDK 309 Query: 327 LGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS- 385 + + + Y+E + G++ S+++ +Y + ++ L GS Sbjct: 310 MNALESHEFQVLC---RDGKYKEAAHIFKLGDYYSKKLGIKYLNKRNEKNNI---LMGSY 363 Query: 386 GVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 G+ + R L +++++ + DG + +P + P+ Sbjct: 364 GIGIYRLLYFLVDSFYDDDG-IRLPEQIAPF 393 >gi|110347443|ref|NP_009045.2| TATA element modulatory factor [Homo sapiens] gi|218511858|sp|P82094|TMF1_HUMAN RecName: Full=TATA element modulatory factor; Short=TMF; AltName: Full=Androgen receptor coactivator 160 kDa protein; AltName: Full=Androgen receptor-associated protein of 160 kDa gi|109658742|gb|AAI17419.1| TATA element modulatory factor 1 [Homo sapiens] gi|116496953|gb|AAI26124.1| TATA element modulatory factor 1 [Homo sapiens] gi|119585872|gb|EAW65468.1| TATA element modulatory factor 1, isoform CRA_a [Homo sapiens] gi|119585873|gb|EAW65469.1| TATA element modulatory factor 1, isoform CRA_a [Homo sapiens] gi|168277462|dbj|BAG10709.1| TATA element modulatory factor [synthetic construct] Length = 1093 Score = 44.4 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 525 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 584 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V L + L+E+L L++ K+ I Sbjct: 585 ENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 626 >gi|254294721|ref|YP_003060744.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814] gi|254043252|gb|ACT60047.1| threonyl-tRNA synthetase [Hirschia baltica ATCC 49814] Length = 654 Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 90/303 (29%), Gaps = 65/303 (21%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 D S A+ SV + + I + GY EV P L+ +G Sbjct: 251 LDLFHLQSEAQGSVFWHPNGFMIWRQLEAYIRRRQDDDGYVEVKTPQLLNSVFWEQSGHW 310 Query: 213 PKFADDMFCTTDG------RWLIPTSEVSLT-----------NLYSHEIIESKSLPLRFT 255 KF ++MF D + + E L ++ + LPLR Sbjct: 311 SKFRENMFVVPDEIPSVEEEGPVLSGEGELMALKPMNCPAHVQIFKQGTRSYRDLPLRMA 370 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R+E A G++R Q + + RE+ E R L+ + + L Sbjct: 371 EFGCCHRNEPHGALH---GIMRVRQMTQDDAHIFCREDQVANETLRFLNLFKRVYGDFGL 427 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNL-------------YRE------------- 349 L T + + E W + Y E Sbjct: 428 DQISYKLATR----PEQRAGNDETWDQAEGALATALNEAGLEFDYAEGEGAFYGPKLEFH 483 Query: 350 ----ISSCSTCGNFQ-----SRRMNSRYRDPNSKSLKFT--H-TLNGSGVAVGRCLIAIL 397 I CG Q R+++ Y + + + H + G+ R + ++ Sbjct: 484 LTDAIGRTWQCGTLQLDYVLPERLDATYVGEDGEKHRPVMLHRAVFGT---FERFMGILI 540 Query: 398 ENY 400 ENY Sbjct: 541 ENY 543 >gi|325685802|gb|EGD27875.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 643 Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 68/190 (35%), Gaps = 9/190 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + ++++D GY V P+L+ +A +G + +DM Sbjct: 256 VGAGLPYWMPKGATIRRIIERYIVDKEV-AAGYQHVYTPVLMNLDAYKTSGHWAHYREDM 314 Query: 220 FCTT-----DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F + L P + S +Y H I + LP+R L R E A G Sbjct: 315 FPPMGMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALS---G 371 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + E R L ++ D++ L D + Sbjct: 372 LQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDYYFRLSYRDPKNTDKYF 431 Query: 335 YDLEVWLAGQ 344 + E+W Q Sbjct: 432 ANDEMWERSQ 441 >gi|227892831|ref|ZP_04010636.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] gi|227865333|gb|EEJ72754.1| theronyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047] Length = 645 Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + DDM Sbjct: 257 VGAGLPYWMPKGATIRRVVERYIIDREVAD-GYDHVYTPVLMNLDAYKTSGHWAHYRDDM 315 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S ++ H I + LPLR L R E A G Sbjct: 316 FPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALS---G 372 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + E ++L ++ K D+ L D + Sbjct: 373 LQRVREMTLNDGHTFVALDQVQDEFAKILKLIMDVYKDFDITDYYFRLSYRDPKNTEKYF 432 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 433 ANDEMWERSQK 443 >gi|146297790|ref|YP_001192381.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101] gi|189083608|sp|A5FP01|SYT_FLAJO RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|146152208|gb|ABQ03062.1| threonyl-tRNA synthetase [Flavobacterium johnsoniae UW101] Length = 648 Score = 44.4 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 48/164 (29%), Gaps = 9/164 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHE---- 243 + GY +V +P + + E +G K+ AD + + E Sbjct: 285 KAGYEQVVSPHIGQKELYVTSGHYAKYGADSFQPIHTPAEGEEFLLKPMNCPHHCEIYNV 344 Query: 244 -IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LP R+ +R E + G+ R F + + E E +++ Sbjct: 345 RPWSYKDLPKRYAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCTPEQLDEEFKKV 401 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + L + D E W +N Sbjct: 402 IDLVLYVFGSLGFENFTAQISLRDQEDREKYIGTDENWEKAENA 445 >gi|297285439|ref|XP_001088711.2| PREDICTED: TATA element modulatory factor isoform 2 [Macaca mulatta] Length = 1095 Score = 44.4 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 527 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 586 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V L + L+E+L L++ K+ I Sbjct: 587 ENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 628 >gi|313124186|ref|YP_004034445.1| threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280749|gb|ADQ61468.1| Threonyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 643 Score = 44.4 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 68/190 (35%), Gaps = 9/190 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + ++++D GY V P+L+ +A +G + +DM Sbjct: 256 VGAGLPYWMPKGATIRRIIERYIVDKEV-AAGYQHVYTPVLMNLDAYKTSGHWAHYREDM 314 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S +Y H I + LP+R L R E A G Sbjct: 315 FPPMDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALS---G 371 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + E R L ++ D++ L D + Sbjct: 372 LQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDYYFRLSYRDPKNTDKYF 431 Query: 335 YDLEVWLAGQ 344 + E+W Q Sbjct: 432 ANDEMWERSQ 441 >gi|300812909|ref|ZP_07093302.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496107|gb|EFK31236.1| threonine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 643 Score = 44.4 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 68/190 (35%), Gaps = 9/190 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + ++++D GY V P+L+ +A +G + +DM Sbjct: 256 VGAGLPYWMPKGATIRRIIERYIVDKEV-AAGYQHVYTPVLMNLDAYKTSGHWAHYREDM 314 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S +Y H I + LP+R L R E A G Sbjct: 315 FPPMDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALS---G 371 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + E R L ++ D++ L D + Sbjct: 372 LQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDYYFRLSYRDPKNTDKYF 431 Query: 335 YDLEVWLAGQ 344 + E+W Q Sbjct: 432 ANDEMWERSQ 441 >gi|255549916|ref|XP_002516009.1| Myosin-2 heavy chain, non muscle, putative [Ricinus communis] gi|223544914|gb|EEF46429.1| Myosin-2 heavy chain, non muscle, putative [Ricinus communis] Length = 691 Score = 44.4 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Query: 9 QNPEHLDIALKKRHLEPQSEYILS--------LDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + + + LK++ + + E + L+ K L K+ + +R +N S Sbjct: 107 EQLKAVIEDLKRKSTDAEIESLREEYHQRVATLERKVYALTKERDTLRREQNRKSD--AA 164 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 A+ + ++ + E L ++ E ++ + +++ Sbjct: 165 ALLKEKDEIISQVMAEGEELSKKQAAQESTIRKLRAQIREF 205 >gi|104774352|ref|YP_619332.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423433|emb|CAI98306.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 643 Score = 44.4 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 69/190 (36%), Gaps = 9/190 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +GA A + R + ++++D GY V P+L+ +A +G + +DM Sbjct: 256 AGAGLPYWMPKGATIRRIIERYIVDKEV-AAGYQHVYTPVLMNLDAYKTSGHWAHYREDM 314 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S +Y H I + LP+R L R E A G Sbjct: 315 FPPMDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALS---G 371 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + E R L ++ D++ L D + Sbjct: 372 LQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDYYFRLSYRDPKNTDKYF 431 Query: 335 YDLEVWLAGQ 344 + E+W Q Sbjct: 432 ANDEMWERSQ 441 >gi|116514446|ref|YP_813352.1| threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093761|gb|ABJ58914.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126146|gb|ADY85476.1| Threonyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 643 Score = 44.4 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 69/190 (36%), Gaps = 9/190 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 +GA A + R + ++++D GY V P+L+ +A +G + +DM Sbjct: 256 AGAGLPYWMPKGATIRRIIERYIVDKEV-AAGYQHVYTPVLMNLDAYKTSGHWAHYREDM 314 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S +Y H I + LP+R L R E A G Sbjct: 315 FPPMDMGEGEMLELRPMNCPSHIQIYKHHIRSYRELPIRIAELGMMHRYEKSGALS---G 371 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + E R L ++ D++ L D + Sbjct: 372 LQRVREMTLNDGHTFVALDQVQEEFARTLQIIMDVYHDFDINDYYFRLSYRDPKNTDKYF 431 Query: 335 YDLEVWLAGQ 344 + E+W Q Sbjct: 432 ANDEMWERSQ 441 >gi|219853213|ref|YP_002467645.1| seryl-tRNA synthetase [Methanosphaerula palustris E1-9c] gi|219547472|gb|ACL17922.1| tRNA synthetase class II (G H P and S) [Methanosphaerula palustris E1-9c] Length = 506 Score = 44.4 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 88/283 (31%), Gaps = 56/283 (19%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ--------- 211 + L RA Q +++ + G+TE+ P LV E +G Sbjct: 206 SRGQWIHGPQSVQLFRAFEQIVMEEIITTLGFTEMIFPKLVPWEVWEKSGHAKGVYPEIY 265 Query: 212 ---IPKFADDMFCTTDGRWLIPTSEVSLTNL----------------------YSHEIIE 246 PK D + G + T +V + + + + Sbjct: 266 YVCTPKTRDPAYWEEVGDYFKVTGKVPIDMIREKVDGPIGGLCYAQCPSFWPFVQGQTLA 325 Query: 247 SKSLPLRFTTLA-PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 S LP+R + S R E+G G+ R +F + E++ + E +++ + Sbjct: 326 SDCLPIRIFDRSGTSHRYESGG----IHGIERVDEFHRIEILWLGTPEQVVETADKLHAA 381 Query: 306 AEEILKRLDLHYRVVSLCT-----------GDLGFSACKTYDLEVWLAGQNLYREISSCS 354 + + + + T G+ T D E L + + E + S Sbjct: 382 YKHLFDEVLNLEWRSAKVTPWFMAQEGMLDGEGVNERIGTTDYEAILPYSDSWLEFQNVS 441 Query: 355 TCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 G+ + N + + SG+ + R A L Sbjct: 442 VNGDKYPKGFNVKVQTGKDCWSG------CSGIGLERWTAAFL 478 >gi|194386578|dbj|BAG61099.1| unnamed protein product [Homo sapiens] Length = 992 Score = 44.4 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 441 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 500 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V L + L+E+L L++ K+ I Sbjct: 501 ENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 542 >gi|332198188|gb|AEE36309.1| golgin candidate 5 [Arabidopsis thaliana] Length = 976 Score = 44.4 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 42/100 (42%), Gaps = 10/100 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILS--------LDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + + + LK++ E + E + L+ K L K+ + +R +N S Sbjct: 378 EQLKSVTEDLKRKSNEAEVESLREEYHQRVATLERKVYALTKERDTLRREQNKKSD--AA 435 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 A+ + +++ + E L ++ E + ++ + +++ Sbjct: 436 ALLKEKDEIINQVMAEGEELSKKQAAQEAQIRKLRAQIRE 475 >gi|91977727|ref|YP_570386.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] gi|91684183|gb|ABE40485.1| Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] Length = 687 Score = 44.4 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 93/297 (31%), Gaps = 36/297 (12%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI------GQAIAEG----NLSLV 70 R+ E ++++K R +I AR + ++ Q A+ + LV Sbjct: 139 RNEPFTPEDFAAIEKKMREII-------ARDKPFTKEVWTRDQTKQVFADNGEMFKVELV 191 Query: 71 DALKN-ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 DA+ ++ + +Q + +S K+ S + + +N +L R G Sbjct: 192 DAIPADQSIKIYKQGDWFDLCRGPHMTSTGKIGSAFKLMKVAGAYWRGDSNNPMLTRIYG 251 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS- 188 + + + E D R + G A G + + Sbjct: 252 TAFAKQEDLDAYLKQIEEAEKRDHRRLGRELDLFHFQEEGPGVVFWHAKGWSVFQSLVAY 311 Query: 189 -----EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEV 234 Y EV+AP ++ +G + ++MF L P + Sbjct: 312 MRRRLAGNYDEVNAPQILDKVLWETSGHWDWYRENMFAAQSAGENAEDKRWFALKPMNCP 371 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ H + + LPLR R E A G++R F + + Sbjct: 372 GHVQIFKHGLKSYRDLPLRMAEFGIVHRYEPSGA---MHGLMRVRGFTQDDAHVFCT 425 >gi|328351896|emb|CCA38295.1| threonyl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 454 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 92/308 (29%), Gaps = 69/308 (22%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 H L L QFM +HG+ EV PL+ + + +G + +DM+ Sbjct: 55 SPGSVFFLPHGTRLFNKLVQFMKIQQ-KKHGFDEVITPLIYKKKLWEISGHWDNYKEDMY 113 Query: 221 CTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 + L P + +Y LP+R++ + R+EA A Sbjct: 114 RVEGNEVSHGDAKDEETFGLKPMNCPGHCLIYKRFDRSINELPIRYSDWSSLHRNEASGA 173 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 G+ R +F + + +E E + L + + L + L T Sbjct: 174 LT---GLTRVRRFHQDDGHIFCTQEQISAEIMKTLHLIKLVYGVFGLSDYTLMLSTR--- 227 Query: 329 FSACKTYDLEVW--------------LAGQNLYRE-----------ISSCSTCG------ 357 LE W RE I S Sbjct: 228 -PDNYVGTLEEWNSAETQLKSVLDQVAPSSWSIREGDGAFYGPKIDILSRDNYSREHQIG 286 Query: 358 ----NFQ-SRRMNSRYRDPNS--KSLKFTH-TLNGSGVAVGRCLIAILENYL-------N 402 +FQ R +YR K H + GS + R + ++++Y N Sbjct: 287 TIQLDFQLPHRFELKYRPHEGDFKPPIMIHRAVFGS---IERFMALLIDHYQGKWPFWMN 343 Query: 403 ADGSVTIP 410 +V IP Sbjct: 344 PRQAVIIP 351 >gi|325269899|ref|ZP_08136509.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608] gi|324987872|gb|EGC19845.1| threonine--tRNA ligase [Prevotella multiformis DSM 16608] Length = 649 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 88/342 (25%), Gaps = 24/342 (7%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IGQAIAEGNLSLVDALKNETST 79 ++EK R L KK E + R+ S I + A+G V+ ++ + Sbjct: 111 GQTISENDFPKIEEKMRELAKKNEPV--VRHDVSKADAIKEFTADGQEYKVEHIEQDLED 168 Query: 80 --LKEQLP-ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + I I + A + R G Sbjct: 169 GTISTYTQGHFTDLCRGPHLVSTGAIKAIKITSVAGAFWRGDAKREQMTRIYGITFPKKK 228 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFS---VLTGHLAHLERALGQFMIDLHTS----- 188 + E+ + E D + K V G L + + Sbjct: 229 MLDEYLVMLEEAKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQDLLRRLLR 288 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYS-----H 242 + Y EV P + +G + D + + + Sbjct: 289 PYNYQEVITPGIGGKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVYAY 348 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + K LPLR FR E + G+ R F + + R E TE E Sbjct: 349 KPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVRPEQVKTEFETN 405 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + ++ K + D EVW + Sbjct: 406 IDIILKVFKTFGFDNYEAQISLRDPNDKEKYIGSDEVWEESE 447 >gi|256848462|ref|ZP_05553904.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256714729|gb|EEU29708.1| threonyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 601 Score = 44.4 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 94/331 (28%), Gaps = 33/331 (9%) Query: 43 KIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL--KK 100 ++E + A + + + +L + +V Sbjct: 73 ELEGLEADIKKLAKNDAKVEFVERDVNDALADVKNDKFSTELINDHAKNGKVAMYNLGNA 132 Query: 101 LISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI---------HLSREHFEIGEALGLM 151 + + + ++ S ++ Sbjct: 133 YAVAEAPILVYGDVVKNFKLLSVAGAYWKGMSSNPMLQRIYGTAFYKKDDLAEDLKKRQE 192 Query: 152 DFDRATKLSGA-------------RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 +R ++ G A + R + +++ID ++ GY V P Sbjct: 193 AKERDHRVIGNQLDLFFVDPKVGAGLPYWLPKGAAIRRTIERYIIDREVAD-GYEHVYTP 251 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLR 253 +L+ +A +G + DDMF D L P + S +Y H + + LPLR Sbjct: 252 VLMNLDAYKTSGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHLRSYRDLPLR 311 Query: 254 FTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL 313 L R E A G+ R + + + + +E ++L + K Sbjct: 312 IAELGMMHRYEKSGALS---GLQRVREMTLNDGHTFVALDQIRSEFAKILKLIMSVYKDF 368 Query: 314 DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 D+ L D + E+W Q Sbjct: 369 DITDYSFRLSLRDPKNVKKYYANDEMWEKSQ 399 >gi|254568978|ref|XP_002491599.1| Mitochondrial threonyl-tRNA synthetase [Pichia pastoris GS115] gi|238031396|emb|CAY69319.1| Mitochondrial threonyl-tRNA synthetase [Pichia pastoris GS115] Length = 461 Score = 44.4 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 92/308 (29%), Gaps = 69/308 (22%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 H L L QFM +HG+ EV PL+ + + +G + +DM+ Sbjct: 62 SPGSVFFLPHGTRLFNKLVQFMKIQQ-KKHGFDEVITPLIYKKKLWEISGHWDNYKEDMY 120 Query: 221 CTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSA 268 + L P + +Y LP+R++ + R+EA A Sbjct: 121 RVEGNEVSHGDAKDEETFGLKPMNCPGHCLIYKRFDRSINELPIRYSDWSSLHRNEASGA 180 Query: 269 GRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 G+ R +F + + +E E + L + + L + L T Sbjct: 181 LT---GLTRVRRFHQDDGHIFCTQEQISAEIMKTLHLIKLVYGVFGLSDYTLMLSTR--- 234 Query: 329 FSACKTYDLEVW--------------LAGQNLYRE-----------ISSCSTCG------ 357 LE W RE I S Sbjct: 235 -PDNYVGTLEEWNSAETQLKSVLDQVAPSSWSIREGDGAFYGPKIDILSRDNYSREHQIG 293 Query: 358 ----NFQ-SRRMNSRYRDPNS--KSLKFTH-TLNGSGVAVGRCLIAILENYL-------N 402 +FQ R +YR K H + GS + R + ++++Y N Sbjct: 294 TIQLDFQLPHRFELKYRPHEGDFKPPIMIHRAVFGS---IERFMALLIDHYQGKWPFWMN 350 Query: 403 ADGSVTIP 410 +V IP Sbjct: 351 PRQAVIIP 358 >gi|320583490|gb|EFW97703.1| Mitochondrial threonyl-tRNA synthetase [Pichia angusta DL-1] Length = 427 Score = 44.4 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 55/178 (30%), Gaps = 13/178 (7%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 S H + L QFM +HG+TEV +PL+ + + +G + Sbjct: 27 MIDASSPGSVFFLPHGTRIFNRLVQFMKIQQ-EKHGFTEVISPLMYKKDLWETSGHWDNY 85 Query: 216 ADDMFCTTDGRWLIPTSEVSL---------TNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 A+DMF V ++ LP+R + + R+E Sbjct: 86 AEDMFRVESNSSSNKLEAVYGLKPMNCPGHCVIFGRFARSHHELPIRLSDWSSLHRNEPS 145 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCT 324 A G+ R +F + + + E + L + L T Sbjct: 146 GALT---GLTRVRRFHQDDGHIFCSKSQVGAEIGKTLQLIRLCYSVFGFQKYRMMLST 200 >gi|126135930|ref|XP_001384489.1| hypothetical protein PICST_21863 [Scheffersomyces stipitis CBS 6054] gi|126091687|gb|ABN66460.1| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 226 Score = 44.4 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 25/67 (37%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 D + + L K +D+ +RN S Q QA G+ L + + ++ ++ E Sbjct: 9 DGEYKKLRAKADDLYKKRNQLSQQSQQAYKSGDKQKAHELSEKAKQIVDEAEGYNRQAAE 68 Query: 94 VCSSLKK 100 Sbjct: 69 YVFRENN 75 >gi|5870866|gb|AAD54608.1| TATA element modulatory factor [Homo sapiens] Length = 1093 Score = 44.4 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 525 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 584 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V L + L+E+L L++ K+ I Sbjct: 585 ENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 626 >gi|291458568|ref|ZP_06597958.1| glycine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] gi|291419101|gb|EFE92820.1| glycine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] Length = 476 Score = 44.4 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 189 TAQGIFVNFKNVQRTSRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 244 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + L L L +++ D L F + T DLE + Sbjct: 245 KPGTDLEWFQYWKDYCKNWLLTLGLPGKMLRARDHDKEELSFYSKATTDLEFLFPF--GW 302 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 303 GELWGIADRTDY 314 >gi|145515070|ref|XP_001443440.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124410818|emb|CAK76043.1| unnamed protein product [Paramecium tetraurelia] Length = 2097 Score = 44.4 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 8/93 (8%) Query: 1 MLDIQ--WIRQNPEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML + + +N E + L K R + I + + + ++ E I+ N + Sbjct: 948 MLKTKKGMLEKNKERYENGLIKLRSTQALVAEI---EIQVKEKQQEAEQIKNEANQVAEV 1004 Query: 58 IGQAIAEGNLSLVDALKNETS--TLKEQLPILE 88 +G+ A+ + A E T+K+ + + Sbjct: 1005 VGKEKAKAEVENAKAADEEAKCSTIKQDVEQKK 1037 >gi|160889627|ref|ZP_02070630.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492] gi|317479178|ref|ZP_07938315.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36] gi|156860619|gb|EDO54050.1| hypothetical protein BACUNI_02053 [Bacteroides uniformis ATCC 8492] gi|316904666|gb|EFV26483.1| threonyl-tRNA synthetase [Bacteroides sp. 4_1_36] Length = 646 Score = 44.4 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 91/334 (27%), Gaps = 40/334 (11%) Query: 53 SNSAQIGQAIAEG------NLSLVDALK-----------NETSTLKEQLPILEKEEHEVC 95 + ++ + +A+ +++ DALK S L++ + Sbjct: 120 AIEKKMAELVAKKEAVVRQDIAKADALKMFGDRGETYKCELISELEDGHITTYTQGAFTD 179 Query: 96 SSLKKLISC------IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + I + + ++ R G + E+ + E Sbjct: 180 LCRGPHLMTTAPIKAIKLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAK 239 Query: 150 LMDFDRATKLSGARFS---VLTGHLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLLV 201 D + K V G L + Q + + + Y EV P + Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299 Query: 202 RDEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +G K+ D F +L P + +Y + K LPLR Sbjct: 300 NKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLA 359 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R E + G+ R F + + R + E R++ + + +D Sbjct: 360 EFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFESMDF 416 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + D E W + E Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAERAIIE 450 >gi|145337778|ref|NP_178101.3| GC5 (golgin candidate 5); protein binding [Arabidopsis thaliana] gi|186496537|ref|NP_001117622.1| GC5 (golgin candidate 5); protein binding [Arabidopsis thaliana] gi|122175613|sp|Q0WVL7|GOGC5_ARATH RecName: Full=Golgin candidate 5; Short=AtGC5 gi|110741773|dbj|BAE98831.1| hypothetical protein [Arabidopsis thaliana] gi|164708704|gb|ABY67249.1| putative TMF-like protein [Arabidopsis thaliana] gi|332198186|gb|AEE36307.1| golgin candidate 5 [Arabidopsis thaliana] gi|332198187|gb|AEE36308.1| golgin candidate 5 [Arabidopsis thaliana] gi|332198189|gb|AEE36310.1| golgin candidate 5 [Arabidopsis thaliana] Length = 956 Score = 44.4 bits (103), Expect = 0.041, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 42/100 (42%), Gaps = 10/100 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILS--------LDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + + + LK++ E + E + L+ K L K+ + +R +N S Sbjct: 378 EQLKSVTEDLKRKSNEAEVESLREEYHQRVATLERKVYALTKERDTLRREQNKKSD--AA 435 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 A+ + +++ + E L ++ E + ++ + +++ Sbjct: 436 ALLKEKDEIINQVMAEGEELSKKQAAQEAQIRKLRAQIRE 475 >gi|270293969|ref|ZP_06200171.1| threonyl-tRNA synthetase [Bacteroides sp. D20] gi|270275436|gb|EFA21296.1| threonyl-tRNA synthetase [Bacteroides sp. D20] Length = 646 Score = 44.4 bits (103), Expect = 0.041, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 91/334 (27%), Gaps = 40/334 (11%) Query: 53 SNSAQIGQAIAEG------NLSLVDALK-----------NETSTLKEQLPILEKEEHEVC 95 + ++ + +A+ +++ DALK S L++ + Sbjct: 120 AIEKKMAELVAKKEAVVRQDIAKADALKMFGDRGETYKCELISELEDGHITTYTQGAFTD 179 Query: 96 SSLKKLISC------IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + I + + ++ R G + E+ + E Sbjct: 180 LCRGPHLMTTAPIKAIKLTSVAGAYWRGQEDRKMMTRIYGITFPKKKMLDEYLVLLEEAK 239 Query: 150 LMDFDRATKLSGARFS---VLTGHLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLLV 201 D + K V G L + Q + + + Y EV P + Sbjct: 240 KRDHRKIGKEMDLFMFSDTVGKGLPMWLPKGTALRIRLQDFLRRIQARYDYQEVMCPPIG 299 Query: 202 RDEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +G K+ D F +L P + +Y + K LPLR Sbjct: 300 NKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLA 359 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 R E + G+ R F + + R + E R++ + + +D Sbjct: 360 EFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFESMDF 416 Query: 316 HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + D E W + E Sbjct: 417 ENFEAQISLRDKVNREKYIGSDENWEKAERAIIE 450 >gi|221633039|ref|YP_002522264.1| glycyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] gi|254782309|sp|B9L0I4|SYG_THERP RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|221156893|gb|ACM06020.1| glycyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] Length = 468 Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 59/176 (33%), Gaps = 16/176 (9%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + +P + +FR+E + R +F + E+ Sbjct: 174 TAQAIFVNFKNVVQTSRVKIPFGIGQIGKAFRNEI----TPGNFIFRLLEFEQMEIEYFI 229 Query: 291 REEDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 R E + L+ + L+ + R +L + KT D E + + Sbjct: 230 RPEMWEEYFDHWLNEMGQFLRWIGFKPDRLRTREHGPQELSHYSRKTVDFEYFFPF--GW 287 Query: 348 REISSCSTCGNFQSRRMN------SRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 +E+ + ++ RR Y D H + + + V R +A+L Sbjct: 288 KELCGLAYRTDYDLRRHQEYSGEDLTYFDQERNERYIPHVIEPT-MGVERLFLALL 342 >gi|171687735|ref|XP_001908808.1| hypothetical protein [Podospora anserina S mat+] gi|170943829|emb|CAP69481.1| unnamed protein product [Podospora anserina S mat+] Length = 514 Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 18/171 (10%) Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 + + + L F+ + + +G+ EV PL+ + + +G + +A D Sbjct: 94 IYSPGSAFFLPSGTRIFNRLVSFLRNQYV-RYGFEEVITPLIYKKDLWAKSGHLENYAQD 152 Query: 219 MFCTTDGRWLIP---------TSEVSL-----TNLYSHEIIESKSLPLRFTTLAPSFRSE 264 M+ T R P + ++S + + LP+R+ +P R+E Sbjct: 153 MYTVTGARHASPEETEETDREYGLKPMNCPGHCLIFSSQKRSFRDLPIRYADFSPLHRNE 212 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + G+ R +F + + R E ++ L + L L Sbjct: 213 NTGSLT---GLTRVRRFHQDDGHIFCRPVQIEEEIKKSLEFVKHTYATLGL 260 >gi|332220153|ref|XP_003259222.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 1 [Nomascus leucogenys] Length = 718 Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 66/211 (31%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNALVAFIRAEYA-RRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMF 376 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 377 AVQPPGSDRPPSSQSDDSTRHITDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 436 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA + R G+ R F + + + E + L + L +R Sbjct: 437 HRAEASGSLR---GLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA 493 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 494 LSTRPSGFLGDPCLWDQAEQVLKQALKEFGE 524 >gi|303237224|ref|ZP_07323794.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN] gi|302482611|gb|EFL45636.1| threonine--tRNA ligase [Prevotella disiens FB035-09AN] Length = 649 Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 53/177 (29%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD-----MFCTTDGRWLIPTSE 233 Q ++ + Y EV P + +G + D +++ Sbjct: 279 LQEVLRKLQRPYHYQEVITPGIGGKNLYVTSGHYAHYGKDAFQPIQTPEEGEEYMLKPMN 338 Query: 234 VSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 +++H+ K LPLR FR E + G+ R F + + R Sbjct: 339 CPHHCEIFAHKPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHLFVRP 395 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E E E ++ +++ + D E+W + +E Sbjct: 396 EQVKKEFEDVIDIIQKVFITFGFENYEAQISLRDPDDKEKYIGSDEIWEESERAIKE 452 >gi|320527308|ref|ZP_08028493.1| glycyl-tRNA synthetase [Solobacterium moorei F0204] gi|320132332|gb|EFW24877.1| glycyl-tRNA synthetase [Solobacterium moorei F0204] Length = 459 Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 76/260 (29%), Gaps = 17/260 (6%) Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 E+ ++ V + + + + RA +L + Sbjct: 51 WQKKFIQEDPNNEEIQAAILMNPKVWEASGHLKGFSDPLMDCKQCHTRH--RADQLIESF 108 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 + + Q++ D + + + + M+ T Q + + Sbjct: 109 SNGTVNPEGWSNEQMEQYIKDNNVPCPDCGGHNFTSIRQFNLMFKTFQ-----GTLEDSK 163 Query: 224 DGRWLIP-TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 + +L P T++ + K LP + SFR+E + R +F Sbjct: 164 NTIYLRPETAQGMFVDFKQVARAYRKKLPFGICQIGKSFRNEI----TPGNFIFRTREFE 219 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLD---LHYRVVSLCTGDLGFSACKTYDLEV 339 + E+ + + + + +L + R +L F + T D+E Sbjct: 220 QMEMEFFCKPGTDDEWFPYWRNFCMDWIVKLGGNPENLRFRDHEKEELSFYSKGTTDIEY 279 Query: 340 WLAGQNLYREISSCSTCGNF 359 + E+ + ++ Sbjct: 280 KFPW--GWGEVWGIADRTDY 297 >gi|12324587|gb|AAG52248.1|AC011717_16 unknown protein; 70672-76070 [Arabidopsis thaliana] Length = 918 Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 42/100 (42%), Gaps = 10/100 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILS--------LDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + + + LK++ E + E + L+ K L K+ + +R +N S Sbjct: 378 EQLKSVTEDLKRKSNEAEVESLREEYHQRVATLERKVYALTKERDTLRREQNKKSD--AA 435 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 A+ + +++ + E L ++ E + ++ + +++ Sbjct: 436 ALLKEKDEIINQVMAEGEELSKKQAAQEAQIRKLRAQIRE 475 >gi|297279894|ref|XP_002808285.1| PREDICTED: LOW QUALITY PROTEIN: threonyl-tRNA synthetase, mitochondrial-like [Macaca mulatta] Length = 669 Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 65/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + +DMF Sbjct: 269 SPGSCFFLPRGTRVYNALVAFIRAEYA-RRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMF 327 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TTD L P + + +++H + LPLR Sbjct: 328 AVQPSGSDRPASSQSDDSTRHTTDILALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 387 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA G+ R F + + + E + L + L +R Sbjct: 388 HRAEASGGL---GGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLA 444 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 445 LSTRPSGFLGDPCLWDQAEQVLQRALKEFGE 475 >gi|90019787|ref|YP_525614.1| hypothetical protein Sde_0138 [Saccharophagus degradans 2-40] gi|89949387|gb|ABD79402.1| conserved hypothetical protein [Saccharophagus degradans 2-40] Length = 471 Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 42/100 (42%), Gaps = 3/100 (3%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 DIQ + ++ E +L K + + I L L ++++ + S++ Sbjct: 2 DIQLLSKDAEAFIASLPK-NAPIDRKTIDQLVVDLTSLKQQLKIKTEEKKETSSKF--RK 58 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 A+ + + +LK + ++ +L LE + + + +L Sbjct: 59 AKDDPEALASLKRKMQSISGELKKLESNKQLLEQQILELC 98 >gi|160947414|ref|ZP_02094581.1| hypothetical protein PEPMIC_01348 [Parvimonas micra ATCC 33270] gi|158446548|gb|EDP23543.1| hypothetical protein PEPMIC_01348 [Parvimonas micra ATCC 33270] Length = 332 Score = 44.0 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 18/99 (18%) Query: 6 WIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSAQ 57 + +NP+ + + K+ L+ + ILS+D I ++ ++A + + Sbjct: 205 LVLENPDAISETVLKKGLDLGTAFEILSID------IADVDIGRNIGAQLQADQAEADKK 258 Query: 58 IGQAIAEGNLSLV----DALKNETSTLKEQLPILEKEEH 92 I QA AE ++ K + +K ++ E + Sbjct: 259 IAQAKAEERRAMAVAVEQENKAKIEEMKAKVVESESKIP 297 >gi|309805191|ref|ZP_07699243.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] gi|308165425|gb|EFO67656.1| threonine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] Length = 461 Score = 44.0 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 73/191 (38%), Gaps = 9/191 (4%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 GA A + R + +++ID ++ GY V P+L+ +A +G + +DM Sbjct: 74 VGAGLPYWMPKGATIRRVIERYIIDKEVAD-GYQHVYTPVLMNLDAYKTSGHWAHYREDM 132 Query: 220 FCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRG 274 F D L P + S +Y+H I + LP+R L R E A G Sbjct: 133 FPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRELPIRIAELGMMHRYEKSGALS---G 189 Query: 275 MLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 + R + + + + +E ++L E+ + D+ L D + Sbjct: 190 LQRVREMTLNDGHTFVELDQVQSEFAKILKLIMEVYRDFDITDYYFRLSYRDPKNTDKYF 249 Query: 335 YDLEVWLAGQN 345 + E+W Q Sbjct: 250 ANDEMWERSQK 260 >gi|296820624|ref|XP_002849971.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238837525|gb|EEQ27187.1| threonyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 520 Score = 44.0 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 14/118 (11%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL--------- 236 ++G+ EV P + + +G + DDM+ +E Sbjct: 98 QYRQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVGGRGNTAEATEDETYGLKPMNCP 157 Query: 237 --TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 L+ + + LP+R+ +P R+E + G+ R +F + + R Sbjct: 158 GHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSLS---GLTRVRRFHQDDGHIFCRP 212 >gi|194754695|ref|XP_001959630.1| GF11946 [Drosophila ananassae] gi|190620928|gb|EDV36452.1| GF11946 [Drosophila ananassae] Length = 757 Score = 44.0 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 22/96 (22%) Query: 1 ML---DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML D+ I ++ E A + +SE +L+ +EK++ +IE ++A + + Sbjct: 1 MLGDDDL-DIYEDLEDFQKA-----EDKKSEQLLAWEEKHKSATVEIEALKAENKALGKK 54 Query: 58 I-------------GQAIAEGNLSLVDALKNETSTL 80 I +A + +L+D L+ E + Sbjct: 55 IKVMEVNLQNLLDTAKAEMKRKEALIDQLRKEKDDI 90 >gi|68468847|ref|XP_721482.1| hypothetical protein CaO19.2984 [Candida albicans SC5314] gi|68469391|ref|XP_721210.1| hypothetical protein CaO19.10501 [Candida albicans SC5314] gi|46443119|gb|EAL02403.1| hypothetical protein CaO19.10501 [Candida albicans SC5314] gi|46443402|gb|EAL02684.1| hypothetical protein CaO19.2984 [Candida albicans SC5314] Length = 455 Score = 44.0 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 92/295 (31%), Gaps = 60/295 (20%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + H + L QFM + T ++G+ EV PL+ + + +G + DDM Sbjct: 48 TSPGSIFFLPHGTRILNKLIQFMKNQQT-KYGFQEVVTPLIFKTKLWKKSGHWDNYKDDM 106 Query: 220 FCT---------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 F L P + S +++ + LP+R++ + R+E Sbjct: 107 FKVVGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKFDRSYQELPVRYSDFSSLHRNE 166 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL--------- 315 A A G+ R +F + + + E + L ++ + Sbjct: 167 ASGALS---GLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELIKDTYNVFGINEIEFYLST 223 Query: 316 ------------------HYRVVSLCTGDLGFSACKTYDLEVWLAG-----QNLYREISS 352 + V T G A + D + ++ + + Sbjct: 224 RPEDKFIGEIETWDIAESQLKNVLNSTAGEGNWATREGDGAFYGPKIDVLLKDAFNKKHQ 283 Query: 353 CSTC-GNFQ-SRRMNSRYRDPNSKSLK---FTH-TLNGSGVAVGRCLIAILENYL 401 T +FQ R +Y + K H + GS R +L++Y Sbjct: 284 VGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFGSL---ERFFAILLDHYQ 335 >gi|260591627|ref|ZP_05857085.1| threonine--tRNA ligase [Prevotella veroralis F0319] gi|260536427|gb|EEX19044.1| threonine--tRNA ligase [Prevotella veroralis F0319] Length = 649 Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 87/343 (25%), Gaps = 24/343 (6%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IGQAIAEGNLSLVDALKNETS 78 + ++EK R L KK E + R+ S + + A+G V+ ++ + Sbjct: 110 KGQAISENDFPKIEEKMRELAKKNEQV--VRHDISKANAVKEFTADGQEYKVEHIEQDLE 167 Query: 79 TLKEQLPILEKEEHEVCSSL---KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 I I + A + R G Sbjct: 168 DGTISTYTQGSFTDLCRGPHLVSTGAIKAIKITSVAGAFWRGDAKREQMTRIYGISFPKK 227 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFS---VLTGHLAHLERALGQFMIDLHTS---- 188 + E+ + E D + K V G L + + Sbjct: 228 KMLDEYLVMLEEAKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRRLL 287 Query: 189 -EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYS----- 241 + Y EV P + +G + D F + + Sbjct: 288 RPYNYQEVITPGIGGKNLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEVYA 347 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 ++ K LPLR FR E + G+ R F + + R + E E Sbjct: 348 YKPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVRPDQVKAEFET 404 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + ++ + D EVW + Sbjct: 405 NIDIILKVFATFGFDNYEAQISLRDPNDKEKYIGSDEVWEESE 447 >gi|238879230|gb|EEQ42868.1| threonyl-tRNA synthetase, mitochondrial precursor [Candida albicans WO-1] Length = 455 Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 92/295 (31%), Gaps = 60/295 (20%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + H + L QFM + T ++G+ EV PL+ + + +G + DDM Sbjct: 48 TSPGSIFFLPHGTRILNKLIQFMKNQQT-KYGFQEVVTPLIFKTKLWKKSGHWDNYKDDM 106 Query: 220 FCT---------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 F L P + S +++ + LP+R++ + R+E Sbjct: 107 FKVVGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKFDRSYQELPVRYSDFSSLHRNE 166 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL--------- 315 A A G+ R +F + + + E + L ++ + Sbjct: 167 ASGALS---GLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELIKDTYNVFGINEIEFYLST 223 Query: 316 ------------------HYRVVSLCTGDLGFSACKTYDLEVWLAG-----QNLYREISS 352 + V T G A + D + ++ + + Sbjct: 224 RPEDKFIGEIETWDIAESQLKNVLNSTAGEGNWATREGDGAFYGPKIDVLLKDAFNKKHQ 283 Query: 353 CSTC-GNFQ-SRRMNSRYRDPNSKSLK---FTH-TLNGSGVAVGRCLIAILENYL 401 T +FQ R +Y + K H + GS R +L++Y Sbjct: 284 VGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFGSL---ERFFAILLDHYQ 335 >gi|86749289|ref|YP_485785.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] gi|86572317|gb|ABD06874.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodopseudomonas palustris HaA2] Length = 661 Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 96/321 (29%), Gaps = 36/321 (11%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI------GQAIAEG----NLSLV 70 R+ E ++++K R +I++ + +I + A+ + LV Sbjct: 112 RNEPFTPEDFGAIEKKMREIIQRD-------KPFTKEIWSRDETKKVFADNGEMFKVELV 164 Query: 71 DALKN-ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 DA+ +T + +Q + +S K+ + + + +N +L R G Sbjct: 165 DAIPADQTIKIYKQGDWFDLCRGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYG 224 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS- 188 + + + E D + + G A G + Sbjct: 225 TAFAKQDDLDAYLKQIEEAEKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWSIFQSLVGY 284 Query: 189 -----EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEV 234 Y EV+AP ++ +G + ++MF L P + Sbjct: 285 MRRRLAGDYDEVNAPQILDKVLWETSGHWEWYRENMFAAQSAGEDAEDKRWFALKPMNCP 344 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 ++ H + + LPLR R E A G++R F + + E Sbjct: 345 GHVQIFKHGLKSYRDLPLRMAEFGVVHRYEPSGA---MHGLMRVRGFTQDDAHVFCTEAQ 401 Query: 295 SFTEHERMLSCAEEILKRLDL 315 E ++ Sbjct: 402 LADECMKINDLIMSTYSDFGF 422 >gi|209549572|ref|YP_002281489.1| tRNA synthetase class II (G H P and S) [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535328|gb|ACI55263.1| tRNA synthetase class II (G H P and S) [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 249 Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 54/181 (29%), Gaps = 14/181 (7%) Query: 197 APLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 P ++ A + T T + LPL Sbjct: 54 MPRVMVSSAYSNAEIWVQEQLSAGDTALVLRPETTPSTYAYMQHILGNHSKTRLPLCVWQ 113 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 S+R E A + +R +FW+ E + H L ++ L +H Sbjct: 114 AGRSYRREQEQATKH----IRLKEFWQLEFQCAFTADSGNDYHAACLEPVRRMIASL-IH 168 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF-QSRRMNSRYRDPNSKS 375 + + L + T D+EV + + E+ S S +F Q RYR K Sbjct: 169 LPTRIVPSDRLPAYSEVTMDIEV--DNGDKWMEVCSISRRTDFPQ------RYRAQPKKG 220 Query: 376 L 376 Sbjct: 221 P 221 >gi|3859700|emb|CAA21975.1| mitochondrial threonyl tRNA synthetase [Candida albicans] Length = 455 Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 92/295 (31%), Gaps = 60/295 (20%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 + H + L QFM + T ++G+ EV PL+ + + +G + DDM Sbjct: 48 TSPGSIFFLPHGTRILNKLIQFMKNQQT-KYGFQEVVTPLIFKTKLWKKSGHWDNYKDDM 106 Query: 220 FCT---------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 F L P + S +++ + LP+R++ + R+E Sbjct: 107 FKVVGNDITKEEYTDNIEEHEYGLKPMNCPSHCMIFAKFDRSYQELPVRYSDFSSLHRNE 166 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL--------- 315 A A G+ R +F + + + E + L ++ + Sbjct: 167 ASGALS---GLTRVRRFHQDDGHIFCSMDQIDGEIKNTLELIKDTYNVFGINEIEFYLST 223 Query: 316 ------------------HYRVVSLCTGDLGFSACKTYDLEVWLAG-----QNLYREISS 352 + V T G A + D + ++ + + Sbjct: 224 RPEDKFIGEIETWDIAESQLKNVLNSTAGEGNWATREGDGAFYGPKIDVLLKDAFNKKHQ 283 Query: 353 CSTC-GNFQ-SRRMNSRYRDPNSKSLK---FTH-TLNGSGVAVGRCLIAILENYL 401 T +FQ R +Y + K H + GS R +L++Y Sbjct: 284 VGTIQLDFQLPNRFELKYVGEDGKRDHQPILVHRAVFGSL---ERFFAILLDHYQ 335 >gi|195336930|ref|XP_002035086.1| GM14112 [Drosophila sechellia] gi|194128179|gb|EDW50222.1| GM14112 [Drosophila sechellia] Length = 458 Score = 44.0 bits (102), Expect = 0.047, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 110/299 (36%), Gaps = 49/299 (16%) Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K + + + + G +++ P+L TG++ Sbjct: 40 KSGSNGTYQIMPMAQRSVDKFINL-VQSNMQQAGGQKITLPILTPTGLWKKTGRLEGDIS 98 Query: 218 DMFCTTDGRW----LIPTSEVSLTNLYSHE-IIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + + D + PT E ++T + + I + LPLR + P FR E + Sbjct: 99 EFYMVRDRSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFRDELKTRF--- 155 Query: 273 RGMLRQHQFWKCELVSIT-REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 G++R +F ++ S EE + + + S + + K+L++ + V+ TG +G S Sbjct: 156 -GLMRAKEFLMKDMYSFDVSEETARETYSVVNSAYDRLFKQLEVPFVKVNAATGIMGGSV 214 Query: 332 CKTYDLEVWLAGQNLYREISSC------------STC----------------------G 357 Y V G++ + SSC ++C Sbjct: 215 SHEY-HYVSSVGEDNLLQCSSCGFAGNSEVVKAPASCPSCNSSDLKEVRGVEVAHTFLLE 273 Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + S+ + + + + + K + G+ + R + A LE L++D + P +L PY Sbjct: 274 DKYSKPLGATFLNTSGKPQSLV--MGCYGIGITRVIAAALE-VLSSDHELHWPKLLAPY 329 >gi|119192414|ref|XP_001246813.1| hypothetical protein CIMG_00584 [Coccidioides immitis RS] Length = 744 Score = 44.0 bits (102), Expect = 0.047, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 7/99 (7%) Query: 3 DIQWIRQ--NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +I+ +R+ N E + +++ + + ++++ L ++IE +RA + S ++ + Sbjct: 576 NIKALRKKQNEELAKYKIMEQYAKEDKDKADRAEKRSIQLQEEIEALRAESHELSKEMKK 635 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 A L D E+ + E L LE + EV S Sbjct: 636 A-----ADLADKAWKESESYAEILGALEGKRIEVKSIQT 669 >gi|301767961|ref|XP_002919352.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Ailuropoda melanoleuca] Length = 718 Score = 44.0 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + L F+ +T G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNTLVAFIRAEYT-RRGFSEVKTPTLFSAKLWELSGHWEHYQEDMF 376 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 377 TLQPPGSDRLASSPSDHPTSHPTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 436 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA + G+ R F + + + E L + L +R Sbjct: 437 HRAEASGSL---GGLTRLRCFQQDDAHIFCAPDQLEAEIRSCLDFLRSVYAVLGFSFRLA 493 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 494 LSTRPSGFLGEPCVWDQAEQVLQRALEEFGE 524 >gi|281352894|gb|EFB28478.1| hypothetical protein PANDA_008019 [Ailuropoda melanoleuca] Length = 718 Score = 44.0 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + L F+ +T G++EV P L + +G + +DMF Sbjct: 318 SPGSCFFLPRGTRVYNTLVAFIRAEYT-RRGFSEVKTPTLFSAKLWELSGHWEHYQEDMF 376 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 TD L P + + +++H + LPLR Sbjct: 377 TLQPPGSDRLASSPSDHPTSHPTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGAL 436 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA + G+ R F + + + E L + L +R Sbjct: 437 HRAEASGSL---GGLTRLRCFQQDDAHIFCAPDQLEAEIRSCLDFLRSVYAVLGFSFRLA 493 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG +V + E Sbjct: 494 LSTRPSGFLGEPCVWDQAEQVLQRALEEFGE 524 >gi|148256517|ref|YP_001241102.1| threonyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gi|146408690|gb|ABQ37196.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Bradyrhizobium sp. BTAi1] Length = 688 Score = 44.0 bits (102), Expect = 0.050, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 96/317 (30%), Gaps = 28/317 (8%) Query: 21 RHLEPQSEYILSLDEKNRILIKK-----IEDI-RARRNSNSAQIGQAIAEGNLSLVDAL- 73 R+ E ++++K R +I + E R + G+A + LVDA+ Sbjct: 140 RNEPFTPEDFAAIEKKMREIIGRDKPFTKEVWDREKTKQVFRDKGEAFK---VELVDAIP 196 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 +E + Q + +S K+ + + + +N +L R G + Sbjct: 197 GDEPIKIYSQGDWFDLCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFA 256 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS----- 188 + + E D + + G G + + Sbjct: 257 RQEQLDAYLKQIEEAEKRDHRKLGRELDLFHFQEEGPGVVFWHPKGWSIFQALIAYMRRR 316 Query: 189 -EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEVSLTN 238 Y EV+AP ++ +G + ++MF L P + Sbjct: 317 LAGEYDEVNAPQILDKSLWETSGHWNWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQ 376 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ H + + LPLR R EA A G++R F + + E+ E Sbjct: 377 IFKHGLKSYRDLPLRLAEFGVVHRYEASGA---MHGLMRVRGFTQDDAHIFCTEDQLAEE 433 Query: 299 HERMLSCAEEILKRLDL 315 ++ Sbjct: 434 CLKINDLILSTYSDFGF 450 >gi|325860506|ref|ZP_08173616.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A] gi|325481987|gb|EGC85010.1| threonine--tRNA ligase [Prevotella denticola CRIS 18C-A] Length = 649 Score = 44.0 bits (102), Expect = 0.050, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 44/162 (27%), Gaps = 9/162 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYS-----H 242 + Y EV P + +G + D + + + Sbjct: 289 PYNYQEVITPGIGGKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVYAY 348 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + K LPLR FR E + G+ R F + + R E TE E Sbjct: 349 KPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVRPEQVKTEFETN 405 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + ++ K + D EVW + Sbjct: 406 IDIILKVFKTFGFDNYEAQISLRDPNDKEKYIGSDEVWEESE 447 >gi|315043510|ref|XP_003171131.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311344920|gb|EFR04123.1| threonyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 523 Score = 44.0 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 14/118 (11%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-----------TDGRWLIPTSEV 234 ++G+ EV P + + +G + DDM+ + L P + Sbjct: 101 QYRQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVGGRGDTGDSTENETYGLKPMNCP 160 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 L+ + + LP+R+ +P R+E + G+ R +F + + R Sbjct: 161 GHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSLS---GLTRVRRFHQDDGHIFCRP 215 >gi|260437797|ref|ZP_05791613.1| proline--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292809821|gb|EFF69026.1| proline--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 479 Score = 44.0 bits (102), Expect = 0.052, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 70/197 (35%), Gaps = 13/197 (6%) Query: 219 MFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + + + PTSE + Y EI + LP + R E ++TR LR Sbjct: 103 LNPLQERMCVRPTSETLFCDFYKDEIQSYRDLPKVYNQWCSVVRWE-----KETRPFLRS 157 Query: 279 HQFWKCELVSITREEDSFTEHERMLSC--AEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 +F E + + + + A+ L + + A TY Sbjct: 158 REFLWQEGHTAHATAEEAEARTQQMLNLYADFCEDFLAIPVVRGRKTDKEKFAGAEATYT 217 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH-TLNGSGVAVGRCLIA 395 +E + + + G+ ++ +Y D ++K LK+ H T S R + A Sbjct: 218 IEALM-HDGKALQSGTSHNFGDGFAKAFGIQYTDKDNK-LKYVHQT---SWGMTTRLIGA 272 Query: 396 ILENYLNADGSVTIPTV 412 ++ + + G V P V Sbjct: 273 LIMVHGDDSGLVLPPRV 289 >gi|160931282|ref|ZP_02078683.1| hypothetical protein CLOLEP_00119 [Clostridium leptum DSM 753] gi|156869760|gb|EDO63132.1| hypothetical protein CLOLEP_00119 [Clostridium leptum DSM 753] Length = 450 Score = 44.0 bits (102), Expect = 0.052, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 13/151 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + + LP + SFR+E R +F + EL Sbjct: 163 TAQGIFVNFANIQRTTRRKLPFGVCQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 218 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L F + T D+E + Sbjct: 219 KPDTDLEWFYYWKDYCKNWLLSLGIKEENMRLRDHEKEELSFYSKATTDIEYLFPF--GW 276 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 E+ + N+ + +++D + KSL++ Sbjct: 277 GELWGIADRTNYDLK----QHQDHSGKSLEY 303 >gi|282858709|ref|ZP_06267863.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010] gi|282588513|gb|EFB93664.1| threonine--tRNA ligase [Prevotella bivia JCVIHMP010] Length = 649 Score = 44.0 bits (102), Expect = 0.053, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 51/167 (30%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADD-----MFCTTDGRWLIPTSEVSL-TNLYSH 242 + Y EV P + +G + D D +++ +Y+H Sbjct: 289 PYNYQEVITPGIGSKNLYVTSGHYAHYGKDAFQPIQTPEEDEEYMLKPMNCPHHCEIYAH 348 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + K LPLR +R E + G+ R F + + R + E E Sbjct: 349 KPRSYKDLPLRIAEFGTVYRYEKSG---ELHGLTRVRNFTQDDAHIFVRPDQVKAEFENN 405 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + ++ K + D + +VW + +E Sbjct: 406 IDIILKVFKTFGFENYEAQISLRDPEDKEKYIGEDDVWNESEQAIKE 452 >gi|327314606|ref|YP_004330043.1| threonine--tRNA ligase [Prevotella denticola F0289] gi|326946255|gb|AEA22140.1| threonine--tRNA ligase [Prevotella denticola F0289] Length = 649 Score = 44.0 bits (102), Expect = 0.053, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 44/162 (27%), Gaps = 9/162 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYS-----H 242 + Y EV P + +G + D + + + Sbjct: 289 PYNYQEVITPGIGGKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEVYAY 348 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + K LPLR FR E + G+ R F + + R E TE E Sbjct: 349 KPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVRPEQVKTEFETN 405 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + ++ K + D EVW + Sbjct: 406 IDIILKVFKTFGFDNYEAQISLRDPNDKEKYIGSDEVWEESE 447 >gi|292610867|ref|XP_696219.3| PREDICTED: hypothetical protein LOC567822 [Danio rerio] Length = 1192 Score = 44.0 bits (102), Expect = 0.053, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 7/111 (6%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEK---NRILIKKIEDIRARRNSNSAQIGQAI--A 63 ++P++L + R I LD+K L K+++ N + ++ AI Sbjct: 389 EDPDNL-QKISNRQENV-LNLIEELDDKMPSKPKLQKELDKKEQLLNEKNKELATAIEDV 446 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + LK E S LK Q+ E+ + L++ + + Sbjct: 447 NELKRDIAQLKKEVSMLKTQISTAEETAKKKIKDLEEQLKQSNQELHDANT 497 >gi|222087085|ref|YP_002545620.1| tRNA synthetase class II (G H P and S) [Agrobacterium radiobacter K84] gi|221724533|gb|ACM27689.1| tRNA synthetase class II (G H P and S) [Agrobacterium radiobacter K84] Length = 294 Score = 43.6 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 54/170 (31%), Gaps = 16/170 (9%) Query: 214 KFADDMFCTTDGRWLIP--TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRD 271 + + T L P T + + E LPL S+R E + Sbjct: 114 WVQEQISPTDPQLVLRPETTPSTYVYMQHLLENHSRTRLPLCVWQAGKSYRREQEQPTKH 173 Query: 272 TRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 +R +FW+ E + H L ++ + +H + + L + Sbjct: 174 ----VRLKEFWQLEFQCAFTADSGNDYHAACLEPVRRMIASM-IHLPTRIVPSDRLPAYS 228 Query: 332 CKTYDLEVWLAGQNLYREISSCSTCGNF-QSRRMNSRYRDPNSKSLKFTH 380 T D+EV + + E+ S S +F Q RYR H Sbjct: 229 QVTMDIEV--DNGDKWMEVCSISKRTDFPQ------RYRSKGKAGPVVDH 270 >gi|67472673|ref|XP_652128.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|56468941|gb|EAL46742.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS] Length = 579 Score = 43.6 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI--AEGNLSLVDALKNETS 78 + ++ S+ I +D + L + E ++ N QI L E + Sbjct: 378 KEVQESSQDIKEIDN-IKELQSENEQLQREINEMKKQIQNIKEEKSKRDEETTRLIKENN 436 Query: 79 TLKEQLPILEKEEHEV 94 +K+Q+ L+++ ++ Sbjct: 437 EMKKQINDLKQKLRDM 452 >gi|326471753|gb|EGD95762.1| threonyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 511 Score = 43.6 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 17/121 (14%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL--------- 236 ++G+ EV P + + +G + DDM+ TSE S Sbjct: 86 QYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVGGRGDTGETSETSENEIYGLKPM 145 Query: 237 -----TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 L+ + + LP+R+ +P R+E + G+ R +F + + R Sbjct: 146 NCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSLS---GLTRVRRFHQDDGHIFCR 202 Query: 292 E 292 Sbjct: 203 P 203 >gi|288802831|ref|ZP_06408268.1| threonine--tRNA ligase [Prevotella melaninogenica D18] gi|288334648|gb|EFC73086.1| threonine--tRNA ligase [Prevotella melaninogenica D18] Length = 649 Score = 43.6 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 97/350 (27%), Gaps = 30/350 (8%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IGQAIAEGNLSLVDALKNETST 79 ++EK R L KK E + RRN S + + A+G V+ + Sbjct: 111 GQTISENDFPKIEEKMRELAKKNEPV-VRRN-VSKADAVKEFTADGQEYKVEHI---VED 165 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPN------VPLEEVPIGTSANENILIRSVGKKPS 133 L++ + + + + A + R G Sbjct: 166 LEDGTISTYSQGNFTDLCRGPHLVSTGAIKAVKITSVAGAFWRGDAKREQMTRIYGITFP 225 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFS---VLTGHLAHLERALGQFMIDLHTS-- 188 + E+ E+ E D + K V G L + + Sbjct: 226 KKKMLDEYLEMLEEAKKRDHRKIGKEMELFMFSDRVGKGLPIWLPKGTQLRLRLQELLRR 285 Query: 189 ---EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTSEVSLTNL 239 + Y EV P + +G + D F L P + + Sbjct: 286 LLRPYNYQEVITPGIGGKNLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEI 345 Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 Y+++ K LPLR FR E + G+ R F + + R + E Sbjct: 346 YAYKPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVRPDQVKAEF 402 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E + ++ K + D EVW + +E Sbjct: 403 ENNIDIILKVFKTFGFDNYEAQISLRDPEDKEKYIGSDEVWEESEAAIKE 452 >gi|114587773|ref|XP_001136307.1| PREDICTED: TATA element modulatory factor 1 isoform 2 [Pan troglodytes] Length = 907 Score = 43.6 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 339 KKEIKNIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 398 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V L + L+E+L L++ K+ I Sbjct: 399 ENENMVAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 440 >gi|262382112|ref|ZP_06075250.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|298375301|ref|ZP_06985258.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19] gi|262297289|gb|EEY85219.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|298267801|gb|EFI09457.1| threonine--tRNA ligase [Bacteroides sp. 3_1_19] Length = 651 Score = 43.6 bits (101), Expect = 0.058, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 51/177 (28%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTS 232 Q + + + Y EV P + +G K+ D F +L P + Sbjct: 277 LQEFLRRIQARYNYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMN 336 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 +Y + K LPLR R E + G+ R F + + R Sbjct: 337 CPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + E ++ + K ++ + D E W + E Sbjct: 394 DQVKQEFLNVMDIISIVFKTMNFENFEAQISLRDKVNREKYIGSDENWEKAEQAIVE 450 >gi|301310685|ref|ZP_07216624.1| threonine--tRNA ligase [Bacteroides sp. 20_3] gi|300832259|gb|EFK62890.1| threonine--tRNA ligase [Bacteroides sp. 20_3] Length = 649 Score = 43.6 bits (101), Expect = 0.058, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 51/177 (28%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTS 232 Q + + + Y EV P + +G K+ D F +L P + Sbjct: 277 LQEFLRRIQARYNYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMN 336 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 +Y + K LPLR R E + G+ R F + + R Sbjct: 337 CPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + E ++ + K ++ + D E W + E Sbjct: 394 DQVKQEFLNVMDIISIVFKTMNFENFEAQISLRDKVNREKYIGSDENWEKAEQAIVE 450 >gi|242073664|ref|XP_002446768.1| hypothetical protein SORBIDRAFT_06g022095 [Sorghum bicolor] gi|241937951|gb|EES11096.1| hypothetical protein SORBIDRAFT_06g022095 [Sorghum bicolor] Length = 158 Score = 43.6 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 5/110 (4%) Query: 8 RQNPEHLD---IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 R+ P+ + L++R E E + L K +L K+ E R R S ++ +A E Sbjct: 48 RKRPDGVKKAKENLRRRGGEACMEALDKLMAKKEVLDKEKEKAREERFMASLEVDKASLE 107 Query: 65 GNLSLV--DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + + K E LKE+ I+ + + ++ + + +E Sbjct: 108 LEKKRLATEEKKAEAKLLKEEKEIMLADMSSLNLMQREWLEKMQKKIVER 157 >gi|149200279|ref|ZP_01877300.1| threonyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] gi|149136643|gb|EDM25075.1| threonyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] Length = 603 Score = 43.6 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 64/187 (34%), Gaps = 15/187 (8%) Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 E F+ + +D + G ++ + + + ++ ++ ++GY VS P Sbjct: 184 EQFDHKKLGKELDIFHFDEKVGKGLALWMPNGTIIRDEIEKYAREME-MKYGYQRVSTPH 242 Query: 200 LVRDEAMYGTGQIPKFADDMFCTTD----------GRWLIPTSEVSLTN-LYSHEIIESK 248 + ++ +G +P +AD MF + ++ + + +YS K Sbjct: 243 IASEKLFQTSGHLPYYADSMFPPMELNEGDDAENSEKYYLKAMNCPYHHLIYSARPRSYK 302 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 LP R +R E + G+LR + E+ E M+ E Sbjct: 303 ELPYRLCEYGTCYRYEKSG---ELSGLLRVRCMTMNDAHVYLTEDQFEEEFRSMVKMYME 359 Query: 309 ILKRLDL 315 + Sbjct: 360 FYETFKF 366 >gi|150007315|ref|YP_001302058.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|255014060|ref|ZP_05286186.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_7] gi|256839604|ref|ZP_05545113.1| threonyl-tRNA synthetase [Parabacteroides sp. D13] gi|166225472|sp|A6L9S2|SYT_PARD8 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|149935739|gb|ABR42436.1| threonyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|256738534|gb|EEU51859.1| threonyl-tRNA synthetase [Parabacteroides sp. D13] Length = 651 Score = 43.6 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 51/177 (28%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTS 232 Q + + + Y EV P + +G K+ D F +L P + Sbjct: 277 LQEFLRRIQARYNYQEVMCPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMN 336 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 +Y + K LPLR R E + G+ R F + + R Sbjct: 337 CPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + E ++ + K ++ + D E W + E Sbjct: 394 DQVKQEFLNVMDIISIVFKTMNFENFEAQISLRDKVNREKYIGSDENWEKAEQAIVE 450 >gi|242006516|ref|XP_002424096.1| Lysine-specific histone demethylase, putative [Pediculus humanus corporis] gi|212507402|gb|EEB11358.1| Lysine-specific histone demethylase, putative [Pediculus humanus corporis] Length = 484 Score = 43.6 bits (101), Expect = 0.060, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 59/169 (34%), Gaps = 18/169 (10%) Query: 2 LDIQWIRQNP-------EHLDIALKKRHLEPQS---EYILSLDEKNRILIKKIEDIRARR 51 LD +I+ P E + +K + Q + +++L EK + I K+ +R + Sbjct: 286 LDFNYIKDTPVSLGQALEWVIRLQEKNVKDKQIQHWKNVVALQEKLKTNITKMSSLREKM 345 Query: 52 NSNSAQIGQ------AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 + +I + ++S + +LK++ L E + + KKL Sbjct: 346 KILNKEIKEIKETSDKKNSKDISEIFSLKSKIYELTEVCKTWDSLIKKQDEIEKKLQDLE 405 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFD 154 + + +S + IL A + + DF+ Sbjct: 406 NSSLSD--VYLSSRDRQILDWHFANLEFANATPLNNLSLKHWDQDDDFE 452 >gi|288924947|ref|ZP_06418883.1| threonine--tRNA ligase [Prevotella buccae D17] gi|288338137|gb|EFC76487.1| threonine--tRNA ligase [Prevotella buccae D17] Length = 673 Score = 43.6 bits (101), Expect = 0.064, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 44/170 (25%), Gaps = 9/170 (5%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHE- 243 + Y EV P + +G + D F + + E Sbjct: 286 MLRPYNYQEVITPGIGGKSLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEV 345 Query: 244 ----IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 K LPLR FR E + G+ R F + + R + E Sbjct: 346 FARKPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVRPDQVKAEF 402 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E + ++ + D EVW + +E Sbjct: 403 ETNIDIILKVFNIFGFDNYEAQISLRDPNDKEKYIGSDEVWEESETAIKE 452 >gi|46107732|ref|XP_380925.1| hypothetical protein FG00749.1 [Gibberella zeae PH-1] Length = 499 Score = 43.6 bits (101), Expect = 0.064, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 50/157 (31%), Gaps = 30/157 (19%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL--------- 236 +G+ EV P + + +G + +ADDM+ P + Sbjct: 83 QYVRYGFEEVITPTIYKKSLWAKSGHLENYADDMYAVRGNTEPPPQHDGCCGSHQEYLKP 142 Query: 237 ------------------TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 +++ + + LP+R+ +P R+E A G+ R Sbjct: 143 EEEEEGDYGLKPMNCPGHCLIFASKRHSYRDLPVRYADFSPLHRNEISGALS---GLTRV 199 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +F + + R E ++ L + + L Sbjct: 200 RRFHQDDGHIFCRPSQVEEEIKKTLDFVKVVYTVLRF 236 >gi|320451414|ref|YP_004203510.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01] gi|320151583|gb|ADW22961.1| threonyl-tRNA synthetase [Thermus scotoductus SA-01] Length = 659 Score = 43.6 bits (101), Expect = 0.064, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 95/330 (28%), Gaps = 49/330 (14%) Query: 10 NPEHLDIAL---KKRHLEPQSEY--------ILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +PE + + + ++ + + +++EK R +I K D+ RR ++ Sbjct: 92 DPESVKLGVGPVIEKGFYYDIDAPEPISDEDLPAIEEKMRAIIAK--DLPLRRYVLPREV 149 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + +G L + E++ ++ + + +P+ + Sbjct: 150 ALSRYQGKDPYKTELILDLPE-DEEISFYQQGDEAYGFTDLCRGPHVPSTGRIPPHFKLT 208 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGL--MDFDRATKLSGARF------------ 164 R K+P + F E L + A K R Sbjct: 209 HVAGAYWRGDEKRPMLQRVYGVAFRTAEELKEYLWQLEEAKKRDHRRLGRELELFLIDPM 268 Query: 165 -------SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 + G++ E + GY V+ P + E +G P +A+ Sbjct: 269 VGKGLVLWLPKGNVIREE---LMAFMREEQIRRGYQLVTTPHIGSLELYRTSGHYPYYAE 325 Query: 218 DMFCTTDGRWLIPTSE---VSLTNLYS-----HEIIESKSLPLRFTTLAPSFRSEAGSAG 269 F + E + + + + LPLR +R E Sbjct: 326 SQFPPISFKERGEEEEYLLKPMNCPHHIRIYAFKKRSYRELPLRLAEFGTVYRYEKAG-- 383 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEH 299 + G+ R F + + E E Sbjct: 384 -ELLGLTRVRGFTQDDAHLFCTPEQVKEEF 412 >gi|269986430|gb|EEZ92716.1| threonyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 635 Score = 43.6 bits (101), Expect = 0.064, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 95/309 (30%), Gaps = 22/309 (7%) Query: 44 IEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE-QLPILEKEEHEVCSSLKKLI 102 E ++ R S + + + N ++ ++ L + + + Sbjct: 124 KEKLKFERKDISKEEAVELLKNNKFKLEIIEGVNGNLSIYRNGEFYDLCRGPHIPSTEYL 183 Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK---- 158 + + + ++ R G + E+ ++ E D + K Sbjct: 184 GAVKLLKVSGAYWKGDNKREVMTRIYGISFPSKKDLEEYLKLIEERKEHDHKKIGKELEL 243 Query: 159 ------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 G+ F G + + E +D + YTE+ P++ + + +G Sbjct: 244 FEFSDLSPGSPFFTTKGTIIYNELLKFAKELDKK---YDYTEIITPIIAKIDLWKISGHF 300 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTN-----LYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 K+ ++MF T + L+ + + LP+R + R E Sbjct: 301 DKYKENMFRVTPFESDEEYGLKPMNCPFSALLFKSKTRSYRDLPMRLSDYGFLHRYELEG 360 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 G+LR + + EE +E RM + ++ K + +V + Sbjct: 361 ---TLDGLLRTRLMEQNDSHVYVTEEQIESEIIRMFNILDDTYKPFNFKPIMVLATRPEK 417 Query: 328 GFSACKTYD 336 +D Sbjct: 418 RIGEEALWD 426 >gi|294920174|ref|XP_002778553.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239887121|gb|EER10348.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 66 Score = 43.6 bits (101), Expect = 0.064, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRAR 50 +DI +R +PE + + +KR+ + LD++ R + ++ +R Sbjct: 3 IDINKLRAEKGGDPEAVRASEQKRYRNSDTVGNAVELDQQWRKDMFALDKLREE 56 >gi|73981325|ref|XP_850160.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 2 [Canis familiaris] Length = 721 Score = 43.6 bits (101), Expect = 0.066, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 66/211 (31%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ +T G++EV P L + +G + +DMF Sbjct: 321 SPGSCFFLPRGTRVYNALVAFIRAEYT-RRGFSEVKTPTLFSAKLWELSGHWEHYQEDMF 379 Query: 221 CTTDGRWLIPTSEVSLTN--------------------LYSHEIIESKSLPLRFTTLAPS 260 S +S+ + +++H + LPLR Sbjct: 380 VLQPPGSDRLASSLSVCSTSHSTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGVL 439 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA + G+ R F + + + E + L + L +R Sbjct: 440 HRAEASGSL---GGLTRLRCFQQDDAHIFCAPDQLEEEIQGCLDFLRSVYAVLGFSFRLA 496 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + +G LG S +V + E Sbjct: 497 LSTRPSGFLGESCLWDQAEQVLQRALEEFGE 527 >gi|224076132|ref|XP_002192841.1| PREDICTED: rabaptin, RAB GTPase binding effector protein 1 [Taeniopygia guttata] Length = 857 Score = 43.6 bits (101), Expect = 0.066, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 12/160 (7%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+N E L++R E Q E +L+ + + + E +R+ +I L Sbjct: 146 RENMEREIAELRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALK--EKL 201 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + S +KE LE E +++ +V E+ + Sbjct: 202 AEAEEKIKAASEVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 261 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 262 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 301 >gi|195440008|ref|XP_002067851.1| GK12501 [Drosophila willistoni] gi|194163936|gb|EDW78837.1| GK12501 [Drosophila willistoni] Length = 461 Score = 43.6 bits (101), Expect = 0.066, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 105/300 (35%), Gaps = 50/300 (16%) Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K + + + E G +++ P+L +G++ Sbjct: 40 KSGSNGTYQIMPIAQRSLDKCINLVQQ-NMVEAGGQKITLPVLTSTALWKKSGRLEGDIS 98 Query: 218 DMFCTTDGRW----LIPTSEVSLTNLYSHE-IIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + + D + PT E ++T + + I + LPLR + P FR E S Sbjct: 99 EFYMVRDRSGKQFLMSPTHEEAVTAMLATAAPISYRQLPLRLYQIGPKFRDELKSRF--- 155 Query: 273 RGMLRQHQFWKCELVSIT-REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 GM+R +F ++ + +E + ++ + + ++L++ + V+ TG +G S Sbjct: 156 -GMMRAKEFLMKDMYTFDLSQETAKDTYDIITKAYDRFFQQLEVPFVKVNAETGIMGGSL 214 Query: 332 CKTYDLEVWLAGQNLYREISSC------------STCGNFQ------------------- 360 Y + G++ + SC S C N Q Sbjct: 215 SHEY-HYISSVGEDTLVKCESCGFAGNAEVFHQSSNCPNCQKADNLSQVHGVEVAHTFLL 273 Query: 361 ----SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 S+ + + + + + K + G+ + R L A LE D + P +L PY Sbjct: 274 GDKYSKPLGATFLNTSGKPQSLI--MGCYGIGLSRVLAASLEVLST-DQELRWPKLLAPY 330 >gi|189466356|ref|ZP_03015141.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM 17393] gi|189434620|gb|EDV03605.1| hypothetical protein BACINT_02731 [Bacteroides intestinalis DSM 17393] Length = 646 Score = 43.6 bits (101), Expect = 0.067, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 52/177 (29%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD------GRWLIPTS 232 Q + + + Y EV P + +G K+ D F +L P + Sbjct: 277 LQEFLRRIQARYDYQEVITPPIGNKLLYITSGHYAKYGKDSFQPIHTPEEGEEYFLKPMN 336 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 +Y + K LPLR R E + G+ R F + + R Sbjct: 337 CPHHCMIYKNSPRSYKDLPLRLAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + E R++ + + ++ + D E W + E Sbjct: 394 DQVKDEFLRVMDIISIVFRSMEFANVEAQISLRDKVNREKYIGSDENWERAEQAIIE 450 >gi|269219392|ref|ZP_06163246.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211185|gb|EEZ77525.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] Length = 709 Score = 43.6 bits (101), Expect = 0.068, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 69/210 (32%), Gaps = 20/210 (9%) Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 E + +D + G V L + ++ H E G+ V P Sbjct: 252 ERRDHRRLGAELDLFSFPEEIGPGLVVFHPKGGILRHIVESYVTRRHLEE-GFDFVHTPE 310 Query: 200 LVRDEAMYGTGQIPKFADDMFCTT----------------DGRWLIPTSEVSLTNLYSHE 243 + + + +G +P +AD MF +L + ++ Sbjct: 311 ISKGGLFHTSGHLPYYADTMFPPMKVDEERGADGEVTRAGQDYYLKAMNCPMHNLIFRSR 370 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + LPLRF + +R E G+ R F + + + E + E E +L Sbjct: 371 GRSYRELPLRFFEMGHDYRYEKSG---VVHGLTRMRGFTQDDSHTYCTPEQAKGEIEMLL 427 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACK 333 + +IL+ L + L T D G K Sbjct: 428 NFFLDILRDFGLTDFYLELSTRDEGKKKDK 457 >gi|291403018|ref|XP_002717847.1| PREDICTED: ubiquitin specific peptidase 8 [Oryctolagus cuniculus] Length = 1088 Score = 43.6 bits (101), Expect = 0.069, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 8/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ E ++ +R + + Sbjct: 94 NIKKAIEEAERLSESLKLRYEEAEVRK--KLEEKDR---QEEEQLQQKRQEPGREDVSSS 148 Query: 63 AEGNLSLVDALKNETSTL---KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 A+G+L V KN+ + K + K+ L ++ + Sbjct: 149 AKGSLENVVDSKNKIQKINGEKSEKNETTKKGSITAKELYAMMMDKNISLIVMDARRMQD 208 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I + P EA D K G V Sbjct: 209 YQDSCISNSLSVPEEAISPGVTASWIEANLPDDSKDTWKKRGNVEYV 255 >gi|281208422|gb|EFA82598.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500] Length = 1617 Score = 43.6 bits (101), Expect = 0.069, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 40/93 (43%), Gaps = 10/93 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 DI+ +++ + ++ + + D++ + K++E ++ + IGQ + Sbjct: 740 DIKDLKRQKSEVLKKMR--------DELKKRDDQKQSQNKELEALKKEAKKSEQLIGQLM 791 Query: 63 AEG--NLSLVDALKNETSTLKEQLPILEKEEHE 93 + L+ +E+ +K++L LE + Sbjct: 792 NQSKKKDQLLQKKIDESEQIKKKLKDLESHKQR 824 >gi|222617555|gb|EEE53687.1| hypothetical protein OsJ_37035 [Oryza sativa Japonica Group] Length = 1221 Score = 43.6 bits (101), Expect = 0.069, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 78/259 (30%), Gaps = 28/259 (10%) Query: 23 LEPQSEYIL-SLDEKNRILIKKIED-------IRARRNSNS----------AQIGQAIAE 64 +E +E I L+E R L + +E+ + A++ S I + E Sbjct: 247 IEKDAEKIEAELEEDRRSLQQVLEENQSSDYELSAKKKEQSGFLKKMTLCEKSIAKKKLE 306 Query: 65 --GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + LK + S LK ++ KE + KK + + ++ V + + +E Sbjct: 307 LDKKQPELLRLKEQISRLKSKIKSCNKEIDKKKDDSKKHLEEMKSLQSALVDVTRAIDEL 366 Query: 123 ILIRSVGKKPSA--IHLSREHFEIGEALGLMDFDRATKLSGA------RFSVLTGHLAHL 174 +E+ + LG++D ++++ Sbjct: 367 NEQGQNKSDKLQLADDQLQEYHRMKLVLGVVDMWTLWPNMSFLLSKKIQYTLALTFCYSK 426 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV 234 E A E E++A + + Q+ +++ + Sbjct: 427 EDAGMSTAKLRDEKEVFDKELNAGVEAKKNLEENMQQLRSRENEILSQERELRAKLNKIL 486 Query: 235 SLTNLYSHEIIESKSLPLR 253 + E+ + + Sbjct: 487 HSIPKHEDELAHLREEHNK 505 >gi|198425233|ref|XP_002123203.1| PREDICTED: similar to novel prtoein similar to vertebrate threonyl-tRNA synthetase (TARS, zgc:92586) [Ciona intestinalis] Length = 630 Score = 43.6 bits (101), Expect = 0.069, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 100/327 (30%), Gaps = 54/327 (16%) Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 I + + +K R+H +IG+ L F A Sbjct: 191 RIYGISFPDKKEMKQWQKFQEEAKQRDHRKIGKEQELFFFHEL----SPGSCFFFPRGAF 246 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSE 233 + L F+ + + + G+ EV +P + + +G + +MF + + Sbjct: 247 IYNTLISFIKEEY-RKRGFEEVVSPNIYNSKLWMTSGHWQHYDQNMFSFSVEKETFALKP 305 Query: 234 VSL---TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 ++ ++SH + LP+RF R+E A G+ R +F + + Sbjct: 306 MNCPGHCLMFSHRSRSWRELPIRFADFGVLHRNELSGALT---GLTRVRRFQQDDAHIFC 362 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYR-----VVSLCTGDLGFSACKTYDLEVWL---- 341 R E E L+ + + ++ GD G LE L Sbjct: 363 RPEQIKDEMRGALNFLKAVYDTFGFSFKLFLSTRPEKFLGDPGMWDDAEKQLEECLVEFD 422 Query: 342 ------AGQNLY-------------REISSCSTC-GNFQSRRMNSRYR-------DPNSK 374 G + R C+T +FQ + R+ K Sbjct: 423 HPWKLNPGDGAFYGPKIDIQIMDALRRPHQCATIQLDFQ---LPIRFNLNYVTGEGDEKK 479 Query: 375 SLKFTH-TLNGSGVAVGRCLIAILENY 400 H + GS V R + + ENY Sbjct: 480 RPVIIHRAILGS---VERMIAILTENY 503 >gi|312437966|gb|ADQ77037.1| glycyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus TCH60] Length = 463 Score = 43.6 bits (101), Expect = 0.070, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 66/184 (35%), Gaps = 16/184 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + L L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASDWLTSLNMSSENMRLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNFQSRRMN------SRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 E+ ++ +F R+ RY DP + + + S A R +A L + Sbjct: 289 GELWGIASRTDFDLRKHGEHSGEDFRYHDPETNEKYIPYCIEPSLGA-DRVTLAFLCDAY 347 Query: 402 NADG 405 + +G Sbjct: 348 DEEG 351 >gi|218187327|gb|EEC69754.1| hypothetical protein OsI_39293 [Oryza sativa Indica Group] Length = 1246 Score = 43.6 bits (101), Expect = 0.070, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 78/259 (30%), Gaps = 28/259 (10%) Query: 23 LEPQSEYIL-SLDEKNRILIKKIED-------IRARRNSNS----------AQIGQAIAE 64 +E +E I L+E R L + +E+ + A++ S I + E Sbjct: 247 IEKDAEKIEAELEEDRRSLQQVLEENQSSDYELSAKKKEQSGFLKKMTLCEKSIAKKKLE 306 Query: 65 --GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + LK + S LK ++ KE + KK + + ++ V + + +E Sbjct: 307 LDKKQPELLRLKEQISRLKSKIKSCNKEIDKKKDDSKKHLEEMKSLQSALVDVTRAIDEL 366 Query: 123 ILIRSVGKKPSA--IHLSREHFEIGEALGLMDFDRATKLSGA------RFSVLTGHLAHL 174 +E+ + LG++D ++++ Sbjct: 367 NEQGQNKSDKLQLADDQLQEYHRMKLVLGVVDMWTLWPNMSFLLSKKIQYTLALTFCYSK 426 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV 234 E A E E++A + + Q+ +++ + Sbjct: 427 EDAGMSTAKLRDEKEVFDKELNAGVEAKKNLEENMQQLRSRENEILSQERELRAKLNKIL 486 Query: 235 SLTNLYSHEIIESKSLPLR 253 + E+ + + Sbjct: 487 HSIPKHEDELAHLREEHNK 505 >gi|315607978|ref|ZP_07882971.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574] gi|315250447|gb|EFU30443.1| threonine--tRNA ligase [Prevotella buccae ATCC 33574] Length = 650 Score = 43.6 bits (101), Expect = 0.070, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 44/170 (25%), Gaps = 9/170 (5%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHE- 243 + Y EV P + +G + D F + + E Sbjct: 286 MLRPYNYQEVITPGIGGKSLYVTSGHYAHYGKDAFQPIHTPEEDEEYMLKPMNCPHHCEV 345 Query: 244 ----IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299 K LPLR FR E + G+ R F + + R + E Sbjct: 346 FARKPRSYKDLPLRIAEFGTVFRYEKSG---ELHGLTRVRTFTQDDAHIFVRPDQVKAEF 402 Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E + ++ + D EVW + +E Sbjct: 403 ETNIDIILKVFNIFGFDNYEAQISLRDPNDKEKYIGSDEVWEESETAIKE 452 >gi|73981321|ref|XP_860741.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 4 [Canis familiaris] Length = 695 Score = 43.6 bits (101), Expect = 0.070, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 88/267 (32%), Gaps = 34/267 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ +T G++EV P L + +G + +DMF Sbjct: 321 SPGSCFFLPRGTRVYNALVAFIRAEYT-RRGFSEVKTPTLFSAKLWELSGHWEHYQEDMF 379 Query: 221 CTTDGRWLIPTSEVSLTN--------------------LYSHEIIESKSLPLRFTTLAPS 260 S +S+ + +++H + LPLR Sbjct: 380 VLQPPGSDRLASSLSVCSTSHSTDTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGVL 439 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR-- 318 R+EA + G+ R F + + + E + L + L +R Sbjct: 440 HRAEASGSL---GGLTRLRCFQQDDAHIFCAPDQLEEEIQGCLDFLRSVYAVLGFSFRLA 496 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTC-GNFQ-SRRMNSRYRDPNS--K 374 + + +G LG S ++ + + C T +FQ R + +Y+ + Sbjct: 497 LSTRPSGFLGESCLWDQAEQIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGVLE 556 Query: 375 SLKFTH-TLNGSGVAVGRCLIAILENY 400 H + GS V R L + E+Y Sbjct: 557 RPVLIHRAVLGS---VERMLGVLAESY 580 >gi|332830447|gb|EGK03075.1| threonyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286] Length = 650 Score = 43.2 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 45/167 (26%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYSHEII-- 245 + Y +V P + +G K+ D + + EI Sbjct: 287 KFDYQQVMTPHIGSKILYVTSGHYEKYGKDSFQPIHTPEEGEEFLLKPMNCPHHCEIYKI 346 Query: 246 ---ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LPLR +R E + G+ R F + + E E ++ Sbjct: 347 IPRSYKDLPLRLAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCTPEQLKAEFLKV 403 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + I K LD + D E W + E Sbjct: 404 MDIVFIIFKALDFENFEAQISLRDPENREKYIGSDENWEKAERAIIE 450 >gi|116283245|gb|AAH15545.1| USP8 protein [Homo sapiens] Length = 483 Score = 43.2 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|196018194|ref|XP_002118763.1| hypothetical protein TRIADDRAFT_34690 [Trichoplax adhaerens] gi|190578280|gb|EDV18750.1| hypothetical protein TRIADDRAFT_34690 [Trichoplax adhaerens] Length = 49 Score = 43.2 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQ-SEYILSLDEKNRI 39 LD+ R+ NPE + +KR + + ++ LD + R Sbjct: 3 LDLDLFREDKGGNPESIRQCQRKRFKDVSLVDQVVQLDSEWRK 45 >gi|48477666|ref|YP_023372.1| threonyl-tRNA synthetase [Picrophilus torridus DSM 9790] gi|48430314|gb|AAT43179.1| threonyl-tRNA synthetase [Picrophilus torridus DSM 9790] Length = 710 Score = 43.2 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 11/206 (5%) Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 + I +A + + + K + R+H IG+ + L FD + G F G + Sbjct: 246 MIRIYGTAFPDKKMLNEFLKNREEAMKRDHRRIGQEMDLFIFDTE-RAPGMPFYTPNGAV 304 Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRW 227 E I+ + + EV + RD +G K+ +DMF + Sbjct: 305 IRNELIKYMGEINA---RNNWQEVWTAHVFRDLIWKQSGHYDKYKNDMFLFQLENGEHYG 361 Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 L P + ++ I + +P+++ +R E + G+ R F + Sbjct: 362 LKPMNCPGHITIFQRGIYSYRDMPVKYCEPGTVYRYEKSG---EMGGLTRPRGFTIDDGH 418 Query: 288 SITREEDSFTEHERMLSCAEEILKRL 313 R++ E +L E+ + Sbjct: 419 GFLRQDQILEEVSSLLGMIHEVFNTI 444 >gi|253580799|ref|ZP_04858062.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847869|gb|EES75836.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 475 Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 13/190 (6%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 + + F+ D + + + + + M+ T Q +D T T+ Sbjct: 136 WSQEEMMNFIKDHNVPCPTCGKHNFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPETA 191 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + + K +P + SFR+E R +F + EL Sbjct: 192 QGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCEP 247 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLYRE 349 + + L L L V D L F + T D+E + E Sbjct: 248 DTDLEWFAYWKNFCLNWLHSLGLKDEEVRYRDHDAEELSFYSKATTDVEFLFPF--GWGE 305 Query: 350 ISSCSTCGNF 359 + + ++ Sbjct: 306 LWGIADRTDY 315 >gi|116283737|gb|AAH26954.1| USP8 protein [Homo sapiens] Length = 481 Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|30410999|gb|AAH51345.1| USP8 protein [Homo sapiens] Length = 480 Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|32968185|emb|CAE12059.1| polo kinase kinase 1 [Drosophila melanogaster] Length = 1342 Score = 43.2 bits (100), Expect = 0.075, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 13/137 (9%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1202 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 1251 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 Q E +LV+ ++ S + E+L +E E K+ + L+E+ Sbjct: 1252 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQRLEETFAQQLDEMETLYG 1311 Query: 119 ANENILIRSVGKKPSAI 135 + + S + Sbjct: 1312 GALIVSMPSDTLQRDHF 1328 >gi|62471776|ref|NP_001014549.1| Sterile20-like kinase, isoform E [Drosophila melanogaster] gi|61678339|gb|AAX52684.1| Sterile20-like kinase, isoform E [Drosophila melanogaster] Length = 1342 Score = 43.2 bits (100), Expect = 0.075, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 13/137 (9%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1202 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 1251 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 Q E +LV+ ++ S + E+L +E E K+ + L+E+ Sbjct: 1252 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQRLEETFAQQLDEMETLYG 1311 Query: 119 ANENILIRSVGKKPSAI 135 + + S + Sbjct: 1312 GALIVSMPSDTLQRDHF 1328 >gi|296228693|ref|XP_002759920.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 2 [Callithrix jacchus] Length = 588 Score = 43.2 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 58/183 (31%), Gaps = 25/183 (13%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--------------------CTTDGRWL 228 G+ EV P L + +G + +DMF TTD L Sbjct: 215 RRGFFEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPASSQSDHSTRHTTDTLAL 274 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 P + + +++H + LPLR R+EA G+ R F + + Sbjct: 275 KPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLC---GLTRLRCFQQDDAHI 331 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYR--VVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + E + L + L +R + + +G LG +V Sbjct: 332 FCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRPSGFLGDPCLWDQAEQVLQQALKE 391 Query: 347 YRE 349 + E Sbjct: 392 FGE 394 >gi|302385328|ref|YP_003821150.1| glycyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302195956|gb|ADL03527.1| glycyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 462 Score = 43.2 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 71/264 (26%), Gaps = 13/264 (4%) Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 K V + + N + + D Sbjct: 47 KAWWQKFVQESPYNVGVDCAILMNSQTWIASGHLGGFSDPLMDCKACKERFRADKLIEDY 106 Query: 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 ++ +V A + + ++ + + + + + M+ T Q +D Sbjct: 107 MAENNLTVEGSVDAWSQEEMKNYIDEKNICCPSCGKHDFTDIRQFNLMFKTFQ--GVTED 164 Query: 219 MFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 T T++ N + + K +P + SFR+E R Sbjct: 165 AKNT--VYLRPETAQGIFVNFKNVQRTSRKKIPFGIAQVGKSFRNEI----TPGNFTFRT 218 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRL---DLHYRVVSLCTGDLGFSACKTY 335 +F + EL E LK L D RV +L F + T Sbjct: 219 REFEQMELEFFCEPETDLEWFAYWKEFCINWLKTLGIKDDEMRVRDHEKEELSFYSKATS 278 Query: 336 DLEVWLAGQNLYREISSCSTCGNF 359 D+E + E+ + ++ Sbjct: 279 DIEFLFPF--GWGELWGIADRTDY 300 >gi|167391308|ref|XP_001739716.1| caldesmon [Entamoeba dispar SAW760] gi|165896475|gb|EDR23880.1| caldesmon, putative [Entamoeba dispar SAW760] Length = 996 Score = 43.2 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 28/66 (42%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 + + I L+E+ L I+ ++A+ Q+ + GN + L+ LK+ Sbjct: 344 INKLLKRIKELEEQINELKITIDQLKAKHKRELKQLNEEKESGNNDKIKELEAIIEQLKK 403 Query: 83 QLPILE 88 ++ + Sbjct: 404 EVEEWK 409 >gi|146413645|ref|XP_001482793.1| hypothetical protein PGUG_04748 [Meyerozyma guilliermondii ATCC 6260] Length = 379 Score = 43.2 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 16/174 (9%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 H + L QFM +G+ EV PL+ +++ +G + DDM Sbjct: 43 VTPGSIFFLPHGTRIMNKLIQFMKHQQ-MRYGFEEVITPLIYKNQLWKTSGHWDNYRDDM 101 Query: 220 FCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 F T L P + ++S P+R + + R+EA Sbjct: 102 FKVTGNVVHEHEDPQLHEYGLKPMNCPGHCVIFSKFERSYNEFPIRLSDFSSLHRNEASG 161 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVS 321 A G+ R +F + + + E ++ E K + + Sbjct: 162 ALS---GLTRVRRFHQDDGHIFCEFDQVEDEISNTVNLILESYKVFGIPSNEIK 212 >gi|190348228|gb|EDK40650.2| hypothetical protein PGUG_04748 [Meyerozyma guilliermondii ATCC 6260] Length = 379 Score = 43.2 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 16/174 (9%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 H + L QFM +G+ EV PL+ +++ +G + DDM Sbjct: 43 VTPGSIFFLPHGTRIMNKLIQFMKHQQ-MRYGFEEVITPLIYKNQLWKTSGHWDNYRDDM 101 Query: 220 FCTT------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 F T L P + ++S P+R + + R+EA Sbjct: 102 FKVTGNVVHEHEDPQLHEYGLKPMNCPGHCVIFSKFERSYNEFPIRLSDFSSLHRNEASG 161 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVS 321 A G+ R +F + + + E ++ E K + + Sbjct: 162 ALS---GLTRVRRFHQDDGHIFCEFDQVEDEISNTVNLILESYKVFGIPSNEIK 212 >gi|301778054|ref|XP_002924447.1| PREDICTED: TATA element modulatory factor-like [Ailuropoda melanoleuca] gi|281342539|gb|EFB18123.1| hypothetical protein PANDA_013785 [Ailuropoda melanoleuca] Length = 1089 Score = 43.2 bits (100), Expect = 0.079, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ + + L R + S+ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 521 KKEIKSIKEELATRLNSSETSDLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 580 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + + L + L+E L L++ K+ I Sbjct: 581 ENENTIAKLNKKVKDLEEDLQHLKQVLDGKEEVEKQHRENIK 622 >gi|291393989|ref|XP_002713349.1| PREDICTED: TATA element modulatory factor 1 [Oryctolagus cuniculus] Length = 1094 Score = 43.2 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 526 KKEIKNMKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 585 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + + L + L+E+L L++ ++ I Sbjct: 586 ENENTIAKLNKKVKELEEELQHLKQVLDGKEDVERQHRENIK 627 >gi|21222189|ref|NP_627968.1| threonyl tRNA synthetase [Streptomyces coelicolor A3(2)] gi|10432482|emb|CAC10316.1| putative threonyl tRNA synthetase [Streptomyces coelicolor A3(2)] Length = 430 Score = 43.2 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 63/219 (28%), Gaps = 15/219 (6%) Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 + +H +G L L D D L GA A + L +++ + Sbjct: 15 HDRNHARSHDRDHDHRRLGRELALFDTDP---LMGAGLPYWLPDGAVVRHTLEEYVREAE 71 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYS----- 241 GY V +P+L + E +G + DDMF + + Sbjct: 72 -RRAGYRHVYSPVLGKRELYEISGHWEHYRDDMFPPME-LGAEEVVLRPSLCPHHALVYR 129 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + LPLR L +RSE G+ R + + + E Sbjct: 130 SRARSYRELPLRIAELGAMYRSEPSGVL---GGLSRVRAIHLNDAHIFCTPDQAAAEARA 186 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 L L + L G D E+W Sbjct: 187 ALGLIRRAHADLGIRAARHRLSLP--GPGGKYVADPELW 223 >gi|261367962|ref|ZP_05980845.1| proline--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282569944|gb|EFB75479.1| proline--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 479 Score = 43.2 bits (100), Expect = 0.082, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 20/262 (7%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK--FAD 217 S + V+ + Q +D G+ V+ P+L+ + + G++ + Sbjct: 36 SSVKGFVVLRPYGYAIWENIQKNLDARFKATGHENVAMPMLMPESLLKKEGELVNGFAPE 95 Query: 218 DMFCTT-------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 + T + + PTSE + +SH + + LP+ + R E Sbjct: 96 VAWVTMGGSEPLEERLAVRPTSETLFCDHFSHVLHSYRDLPMLYNQWCSVVRWEKS---- 151 Query: 271 DTRGMLRQHQFWKCELVSI--TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 TR LR +FW E +I T EE +++ A+ L + + Sbjct: 152 -TRPFLRTREFWWQEGHTIHETAEEAKAETEQQLNCYADFCENDLCIPVIKGRKTDKEKF 210 Query: 329 FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVA 388 A TY +E + + + G+ SR + + ++ T S A Sbjct: 211 AGAEATYTIEA-MMKDGKALQSGTSHYFGDKFSRAYDVTFTGRDNTLQYPFQT---SWGA 266 Query: 389 VGRCLIAILENYLNADGSVTIP 410 R + AI+ + + DG + P Sbjct: 267 SSRLIGAIIMTHGDDDGLILPP 288 >gi|311269150|ref|XP_003132365.1| PREDICTED: TATA element modulatory factor-like [Sus scrofa] Length = 1052 Score = 43.2 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ + + L R + S+ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 525 KKEIKSMKEELATRLNSSETSDLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 584 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + + L + L+E+L L++ K+ I Sbjct: 585 ENENIIAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRDNIK 626 >gi|218133229|ref|ZP_03462033.1| hypothetical protein BACPEC_01093 [Bacteroides pectinophilus ATCC 43243] gi|217992102|gb|EEC58106.1| hypothetical protein BACPEC_01093 [Bacteroides pectinophilus ATCC 43243] Length = 462 Score = 43.2 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 73/282 (25%), Gaps = 31/282 (10%) Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV-------GKKPSAIHLSRE 140 E + + + +K + P + I + + + R Sbjct: 40 ELKNNVKKAWWQKFVMESPYNVGVDCAILMNPQTWVASGHLGGFSDPLMDCKECHERFRA 99 Query: 141 HFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLL 200 I + +++ + G + + + A T + + Sbjct: 100 DKLIEDWCADNNYELEGSVDGWTQEQMKNFIEEKQIACPSCGKHNFTDIRQFNLMFKTFQ 159 Query: 201 VRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 E T + T++ N + + K +P + S Sbjct: 160 GVTEDAKNTVYLRPE---------------TAQGIFVNFKNVQRTSRKKVPFGIGQIGKS 204 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH---Y 317 FR+E R +F + EL + S LK L + Sbjct: 205 FRNEI----TPGNFTFRTREFEQMELEFFCKPGTDLEWFNYWRSYCINWLKSLGMKDDEM 260 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 R +L F + T D+E + E+ + ++ Sbjct: 261 RARDHSPEELCFYSKGTTDIEFLFPF--GWGELWGIADRTDY 300 >gi|194041277|ref|XP_001924306.1| PREDICTED: TATA element modulatory factor [Sus scrofa] Length = 1016 Score = 43.2 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 3/95 (3%) Query: 15 DIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL--VD 71 L R + S+ + DE+ R L+++ E + ++ NS I + A+ + + Sbjct: 455 KEELATRLNSSETSDLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDKENENIIA 514 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 L + L+E+L L++ K+ I Sbjct: 515 KLNKKVKELEEELQHLKQVLDGKEEVEKQHRDNIK 549 >gi|27370630|gb|AAH38801.1| USP8 protein [Homo sapiens] Length = 478 Score = 43.2 bits (100), Expect = 0.086, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|16081983|ref|NP_394395.1| prolyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728] gi|74581452|sp|Q9HJN0|SYP_THEAC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|10640252|emb|CAC12066.1| prolyl-tRNA synthetase related protein [Thermoplasma acidophilum] Length = 462 Score = 43.2 bits (100), Expect = 0.086, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 91/256 (35%), Gaps = 24/256 (9%) Query: 170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT-GQIPKFADDMFCTT----- 223 +L ++ + + EV+ P+L+ + I F ++++ T Sbjct: 36 PYGWKIMSLIDSIVRRAVDKRNFQEVNFPILIGRSMLEVEFEHIRGFENEIYWVTKGGKE 95 Query: 224 ---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ-- 278 + L PTSE ++ ++S I LPL+ + +R E + TR +R Sbjct: 96 KLEEELALRPTSESAMYPMFSLWIRSHADLPLKIYQIVSVYRYE----TKHTRSFIRIRE 151 Query: 279 -HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 H F + ED+ + ++ EI L L Y D A T Sbjct: 152 IHFFEAHTAHATY--EDAEAQMDQYKEIWREISSLLCLPYFYDQRPDWDKFPGAMYTIAF 209 Query: 338 EVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH-TLNGSGVAVGRCLIAI 396 + L +I + G S+ + +Y + + + H T G R L AI Sbjct: 210 DTVLPS-GRSLQIGTIHQYGTNFSKNYDIKYLKEDG-TFDYAHQTTYG---MSERLLAAI 264 Query: 397 LENYLNADGSVTIPTV 412 + + + G V P V Sbjct: 265 IGIHGDDKGLVLPPDV 280 >gi|332881917|ref|ZP_08449559.1| MutS domain V protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680152|gb|EGJ53107.1| MutS domain V protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 723 Score = 43.2 bits (100), Expect = 0.087, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 7/81 (8%) Query: 27 SEYILS---LDEKNRILIKKI----EDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 + + D K R LI +I E A+R S + E + + + + Sbjct: 589 VDQLAERYFYDGKRRPLIAEILRLIETENAKRKQLSKEERSQKKEEKKATTEEVHQQMEA 648 Query: 80 LKEQLPILEKEEHEVCSSLKK 100 +++Q +KE + K+ Sbjct: 649 IRQQRKEEKKERMAQERAAKE 669 >gi|327293177|ref|XP_003231285.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326466401|gb|EGD91854.1| threonyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 526 Score = 43.2 bits (100), Expect = 0.087, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 17/121 (14%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL--------- 236 ++G+ EV P + + +G + DDM+ T E S Sbjct: 101 QYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVGGRGDTGDTGETSENEIYGLKPM 160 Query: 237 -----TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 L+ + + LP+R+ +P R+E + G+ R +F + + R Sbjct: 161 NCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSLS---GLTRVRRFHQDDGHIFCR 217 Query: 292 E 292 Sbjct: 218 P 218 >gi|225677700|gb|EEH15984.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 559 Score = 43.2 bits (100), Expect = 0.087, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 19/143 (13%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL------------ 236 ++G+ EV P + + +G + DDM+ T++ + Sbjct: 118 QYGFREVLTPSIYKKSLWEVSGHWQNYKDDMYEVRGRGASGETAKGEIGEDESYGLKPMN 177 Query: 237 ----TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 L+ + + LPLR+ +P R+E + G+ R +F + + R Sbjct: 178 CPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLS---GLTRVRRFHQDDGHIFCRP 234 Query: 293 EDSFTEHERMLSCAEEILKRLDL 315 + +E E L + ++ Sbjct: 235 QQIGSEIESALRFTDTVMNTFGF 257 >gi|189238928|ref|XP_970195.2| PREDICTED: similar to Myosin-11 (Myosin heavy chain 11) (Myosin heavy chain, smooth muscle isoform) (SMMHC) [Tribolium castaneum] Length = 511 Score = 43.2 bits (100), Expect = 0.089, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 56/166 (33%), Gaps = 17/166 (10%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYI------LSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 IR+N + L K+ L Q + + + K R L K+E ++++ ++I Sbjct: 52 IRKNI--IISRLAKKSLRDQQDEFDYSIREIDIYAKKRKLESKVERLQSQIEEKESEIDD 109 Query: 61 AIAEGNL--SLVDALKNETST-------LKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + L + +D +K + L+++ +LE + + + S P E Sbjct: 110 LLKNNKLTYATIDNMKAKIRENLEKRFLLEKKAQVLEADLNHAREVVTLARSVTPVEMDE 169 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRAT 157 + L+R +F + D R Sbjct: 170 NSNSDEITTPLTCDTPDRDSVNHDDLTRLYFIHAKEELKKDKYRLQ 215 >gi|57100952|ref|XP_533766.1| PREDICTED: similar to TATA element modulatory factor 1 [Canis familiaris] Length = 1089 Score = 43.2 bits (100), Expect = 0.090, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ + + L R + S+ + DE+ R L+++ E + ++ NS I + A+ Sbjct: 522 KKEIKSIKEELATRLNSSETSDLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDK 581 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + + L L+E+L L++ K+ I Sbjct: 582 ENENIIAKLNKRVKDLEEELQHLKQVLDGKEEVEKQHRENIK 623 >gi|184154400|ref|YP_001842741.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227364219|ref|ZP_03848315.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|325683422|ref|ZP_08162938.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|183225744|dbj|BAG26261.1| threonyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227070764|gb|EEI09091.1| threonine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|324977772|gb|EGC14723.1| threonine--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 627 Score = 43.2 bits (100), Expect = 0.091, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 72/201 (35%), Gaps = 9/201 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D GA A + R + +++ID ++ GY V P+L+ +A Sbjct: 229 NQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVAD-GYQHVYTPVLMNLDAYKT 287 Query: 209 TGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 +G + DDMF D L P + S +Y H I + LPLR L R Sbjct: 288 SGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRY 347 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 E A G+ R + + + + +E ++L + + D+ L Sbjct: 348 EKSGALS---GLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIMSVYEDFDITDYSFRLS 404 Query: 324 TGDLGFSACKTYDLEVWLAGQ 344 D + E+W Q Sbjct: 405 LRDPKNVKKYYANDEMWEKSQ 425 >gi|24762614|ref|NP_726441.1| Sterile20-like kinase, isoform B [Drosophila melanogaster] gi|45552819|ref|NP_995935.1| Sterile20-like kinase, isoform D [Drosophila melanogaster] gi|45552821|ref|NP_995936.1| Sterile20-like kinase, isoform C [Drosophila melanogaster] gi|21626741|gb|AAF47198.2| Sterile20-like kinase, isoform B [Drosophila melanogaster] gi|45445395|gb|AAS64766.1| Sterile20-like kinase, isoform C [Drosophila melanogaster] gi|45445396|gb|AAS64767.1| Sterile20-like kinase, isoform D [Drosophila melanogaster] Length = 1703 Score = 43.2 bits (100), Expect = 0.091, Method: Composition-based stats. Identities = 35/288 (12%), Positives = 92/288 (31%), Gaps = 32/288 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1202 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 1251 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 Q E +LV+ ++ S + E+L +E E K+ ++ + +++ Sbjct: 1252 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQELNRQIKLAIDQHEKRFG 1311 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + + ++ L + +R++++ + ++ +L Sbjct: 1312 L-----------VTNREEFEDQEVKLPAHLRNIYNERSSRILPRNTFIDPQNMPRSRSSL 1360 Query: 179 GQFMIDLHTSEHGYTEV--------SAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 + + + P++ + + G D+ ++ Sbjct: 1361 LMMGGGGNRLSNFRGSAPDLSRSVPNTPIMHKQQRSQMIGDQVLEEDEEQMLSEQMKRAS 1420 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + + N + ++ T P S + + R Sbjct: 1421 VATLPAQNQLRLITQLPANELVKVVTSTPPLNSAEDVNSKPSMSTFRG 1468 >gi|226295138|gb|EEH50558.1| threonyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 559 Score = 42.8 bits (99), Expect = 0.093, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 19/143 (13%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL------------ 236 ++G+ EV P + + +G + DDM+ T++ + Sbjct: 118 QYGFREVLTPSIYKKSLWEVSGHWQNYKDDMYEVRGRGASGETAKGEIGEDESYGLKPMN 177 Query: 237 ----TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 L+ + + LPLR+ +P R+E + G+ R +F + + R Sbjct: 178 CPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLS---GLTRVRRFHQDDGHIFCRP 234 Query: 293 EDSFTEHERMLSCAEEILKRLDL 315 + +E E L + ++ Sbjct: 235 QQIGSEIESALRFTDTVMNTFGF 257 >gi|301113580|ref|XP_002998560.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262111861|gb|EEY69913.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 338 Score = 42.8 bits (99), Expect = 0.093, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 62/164 (37%), Gaps = 3/164 (1%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 + +R+ E+ +K R+++ Q EY + LD++ L ++I R + + + + Sbjct: 58 KELRRRSENFRDLVKTRNIDIQQEYARMLKELDDQVESLDQEIAQEREMKAERAKRRREE 117 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 E + L+ ETS LKE+L E ++ L + + + P + E Sbjct: 118 DLERKANKKQHLEAETSQLKEKLDEFTSEIRQLQEVFADLEKEVESQGSDNSPDDAQSVE 177 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 + + I ++ + + ++ K S Sbjct: 178 ERQRLEEERAQNEIVELQQEIVLLKEAQEAIAEKIDKQSLKAQY 221 >gi|146339967|ref|YP_001205015.1| threonyl-tRNA synthetase [Bradyrhizobium sp. ORS278] gi|146192773|emb|CAL76778.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) [Bradyrhizobium sp. ORS278] Length = 688 Score = 42.8 bits (99), Expect = 0.093, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 96/317 (30%), Gaps = 28/317 (8%) Query: 21 RHLEPQSEYILSLDEKNRILIKK-----IEDI-RARRNSNSAQIGQAIAEGNLSLVDAL- 73 R+ E ++++K R +I + E R + G+A + LVDA+ Sbjct: 140 RNEPFTPEDFAAIEKKMREIIGRDKPFTKEVWDREKTKQVFRDKGEAFK---VELVDAIP 196 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 NE + Q + +S K+ + + + +N +L R G + Sbjct: 197 GNEPIKIYYQGDWFDLCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFA 256 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS----- 188 + + E D + + G G + + Sbjct: 257 KQEQLDAYLKQIEEAEKRDHRKLGRELDLFHFQEEGPGVVFWHPKGWSIFQALIAYMRRR 316 Query: 189 -EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEVSLTN 238 Y EV+AP ++ +G + ++MF L P + Sbjct: 317 LAGDYDEVNAPQILDKSLWETSGHWNWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQ 376 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ H + + LP+R R EA A G++R F + + E+ E Sbjct: 377 IFKHGLKSYRDLPMRLAEFGVVHRYEASGA---MHGLMRVRGFTQDDAHVFCTEDQLAEE 433 Query: 299 HERMLSCAEEILKRLDL 315 ++ Sbjct: 434 CLKINDLILSTYSDFGF 450 >gi|317158138|ref|XP_001826850.2| hypothetical protein AOR_1_450034 [Aspergillus oryzae RIB40] Length = 1678 Score = 42.8 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 21/203 (10%), Positives = 54/203 (26%), Gaps = 22/203 (10%) Query: 4 IQWIRQNPEHLDIALK-------------KRHLEPQSEYILSLDEKNRILIKKIEDIRAR 50 ++ ++++ E D +K KR ++ ++ + +L++ + K ED R Sbjct: 1259 LKSLQEDLERRDQGMKEHEKKRQHDLEEAKRKVKENNDKLAALEKDVKDAKKNKEDAEKR 1318 Query: 51 -RNSNSA------QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 RN +I + L+N+ + + LE + ++ Sbjct: 1319 YRNELKKQQEERNEIVARKRREYEEKLRKLENDERDYRTKKENLEATHRTNYGEKETALA 1378 Query: 104 CIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG 161 + + + + G D + A Sbjct: 1379 WFKQHKEDTWNDFQKAQKTMHDWDDRWNNASWLDKSFDVNLKAGVNKAKWDLNVAAAAWV 1438 Query: 162 ARFSVLTGHLAHLERALGQFMID 184 G + ++ Sbjct: 1439 GVTKAEEGFVEFTHWPAYNALMQ 1461 >gi|254692871|ref|NP_001157090.1| threonyl-tRNA synthetase, mitochondrial isoform 3 [Mus musculus] Length = 642 Score = 42.8 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 61/211 (28%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + DMF Sbjct: 242 SPGSCFFLPRGTRVYNALVAFIRAEYA-RRGFSEVKTPTLFSTKLWEQSGHWEHYRADMF 300 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 C D L P + + +++H + LP+R Sbjct: 301 SLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLADFGAL 360 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK--RLDLHYR 318 R+EA + G+ R +F + + E + L + H Sbjct: 361 HRAEASGSL---GGLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFLRCVYSVLGFSFHLA 417 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + G LG +V + E Sbjct: 418 LSTRPPGFLGEPRLWDQAEQVLQQALEKFGE 448 >gi|227543651|ref|ZP_03973700.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300908708|ref|ZP_07126171.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112] gi|227186362|gb|EEI66433.1| threonine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300894115|gb|EFK87473.1| threonine--tRNA ligase [Lactobacillus reuteri SD2112] Length = 627 Score = 42.8 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 72/201 (35%), Gaps = 9/201 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D GA A + R + +++ID ++ GY V P+L+ +A Sbjct: 229 NQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVAD-GYQHVYTPVLMNLDAYKT 287 Query: 209 TGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 +G + DDMF D L P + S +Y H I + LPLR L R Sbjct: 288 SGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRY 347 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 E A G+ R + + + + +E ++L + + D+ L Sbjct: 348 EKSGALS---GLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIMSVYEDFDITDYSFRLS 404 Query: 324 TGDLGFSACKTYDLEVWLAGQ 344 D + E+W Q Sbjct: 405 LRDPKNVKKYYANDEMWEKSQ 425 >gi|148706886|gb|EDL38833.1| threonyl-tRNA synthetase-like 1 [Mus musculus] Length = 630 Score = 42.8 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 61/211 (28%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + DMF Sbjct: 230 SPGSCFFLPRGTRVYNALVAFIRAEYA-RRGFSEVKTPTLFSTKLWEQSGHWEHYRADMF 288 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 C D L P + + +++H + LP+R Sbjct: 289 SLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLADFGAL 348 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK--RLDLHYR 318 R+EA + G+ R +F + + E + L + H Sbjct: 349 HRAEASGSL---GGLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFLRCVYSVLGFSFHLA 405 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + G LG +V + E Sbjct: 406 LSTRPPGFLGEPRLWDQAEQVLQQALEKFGE 436 >gi|16197823|gb|AAL13551.1| GH09291p [Drosophila melanogaster] Length = 684 Score = 42.8 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 13/109 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 586 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 635 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 Q E +LV+ ++ S + E+L +E E K++ IP Sbjct: 636 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQVCMQIPV 684 >gi|254692865|ref|NP_082207.2| threonyl-tRNA synthetase, mitochondrial isoform 1 [Mus musculus] gi|118597388|sp|Q3UQ84|SYTM_MOUSE RecName: Full=Threonyl-tRNA synthetase, mitochondrial; AltName: Full=Threonine--tRNA ligase; Short=ThrRS; AltName: Full=Threonyl-tRNA synthetase-like 1; Flags: Precursor gi|74216488|dbj|BAE25159.1| unnamed protein product [Mus musculus] gi|187956085|gb|AAI47502.1| Threonyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus] Length = 723 Score = 42.8 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 61/211 (28%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + DMF Sbjct: 323 SPGSCFFLPRGTRVYNALVAFIRAEYA-RRGFSEVKTPTLFSTKLWEQSGHWEHYRADMF 381 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 C D L P + + +++H + LP+R Sbjct: 382 SLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLADFGAL 441 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK--RLDLHYR 318 R+EA + G+ R +F + + E + L + H Sbjct: 442 HRAEASGSL---GGLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFLRCVYSVLGFSFHLA 498 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + G LG +V + E Sbjct: 499 LSTRPPGFLGEPRLWDQAEQVLQQALEKFGE 529 >gi|12847728|dbj|BAB27683.1| unnamed protein product [Mus musculus] Length = 723 Score = 42.8 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 61/211 (28%), Gaps = 26/211 (12%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + DMF Sbjct: 323 SPGSCFFLPRGTRVYNALVAFIRAEYA-RRGFSEVKTPTLFSTKLWEQSGHWEHYRADMF 381 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 C D L P + + +++H + LP+R Sbjct: 382 SLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLADFGAL 441 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK--RLDLHYR 318 R+EA + G+ R +F + + E + L + H Sbjct: 442 HRAEASGSL---GGLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFLRCVYSVLGFSFHLA 498 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + G LG +V + E Sbjct: 499 LSTRPPGFLGEPRLWDQAEQVLQQALEKFGE 529 >gi|295109870|emb|CBL23823.1| glycyl-tRNA synthetase, dimeric type [Ruminococcus obeum A2-162] Length = 464 Score = 42.8 bits (99), Expect = 0.097, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 57/234 (24%), Gaps = 24/234 (10%) Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 R I + D + + + + E A T Sbjct: 88 MDCKECHERFRADKLIEDFCADHDIEIEGSVDAWSQEKMMDFIKEHEVACPSCGKHNFTD 147 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESK 248 + + E T + T++ N + + K Sbjct: 148 IRQFNLMFKTFQGVTEDAKNTVYLRPE---------------TAQGIFVNFKNVQRTSRK 192 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 +P + SFR+E R +F + EL + + Sbjct: 193 KIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCEPDTDLEWFAYWKKFCLD 248 Query: 309 ILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 L L L V D L F + T D+E + E+ + ++ Sbjct: 249 WLSSLGLKEDEVRYRDHDKEELSFYSKATTDVEFLFPF--GWGELWGIADRTDY 300 >gi|224539835|ref|ZP_03680374.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus DSM 14838] gi|224518545|gb|EEF87650.1| hypothetical protein BACCELL_04745 [Bacteroides cellulosilyticus DSM 14838] Length = 519 Score = 42.8 bits (99), Expect = 0.097, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 73/267 (27%), Gaps = 17/267 (6%) Query: 97 SLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRA 156 I I + + + ++ R G + E+ + E D + Sbjct: 60 MTTAPIKAIKLMSVAGAYWRGHEDRKMMTRIYGITFPKKKMLDEYLAMLEEAKKRDHRKI 119 Query: 157 TKLSGARFS---VLTGHLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 K V G L + Q + + + Y EV P + Sbjct: 120 GKEMDLFMFSDTVGKGLPMWLPKGTALRLRLQEFLRRIQARYDYQEVITPPIGNKLLYIT 179 Query: 209 TGQIPKFADDMFCTTD------GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFR 262 +G K+ D F +L P + +Y + K LPLR R Sbjct: 180 SGHYAKYGKDSFQPIHTPEEGEEYFLKPMNCPHHCMIYKNSPRSYKDLPLRLAEFGTVCR 239 Query: 263 SEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSL 322 E + G+ R F + + R + E R++ + + +D + Sbjct: 240 YEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMDFANVEAQI 296 Query: 323 CTGDLGFSACKTYDLEVWLAGQNLYRE 349 D E W + E Sbjct: 297 SLRDKVNREKYIGSDENWERAEQSIIE 323 >gi|194756778|ref|XP_001960652.1| GF13464 [Drosophila ananassae] gi|190621950|gb|EDV37474.1| GF13464 [Drosophila ananassae] Length = 1664 Score = 42.8 bits (99), Expect = 0.097, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 13/102 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD R+ + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1198 LDPDIERERLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIREL 1247 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 Q E +LV+ + + S + ++L +E E + K+ Sbjct: 1248 EQLQNEKRKALVEHEQTKLSEIDDRLKAELREWREQLAPRKQ 1289 >gi|312379743|gb|EFR25924.1| hypothetical protein AND_08308 [Anopheles darlingi] Length = 1885 Score = 42.8 bits (99), Expect = 0.097, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R L+ E I L++K + L +++++ + + + + S + LK + Sbjct: 1408 TRELDEAFEKIDELEQKRKALQNELDELANTQGTADKNVHELEKAKRALESQLAELKAQN 1467 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L + Sbjct: 1468 EELEDDLQLTEDAKLRLEVNMQALRAQFE 1496 >gi|122920502|pdb|2I1J|A Chain A, Moesin From Spodoptera Frugiperda At 2.1 Angstroms Resolution gi|122920505|pdb|2I1K|A Chain A, Moesin From Spodoptera Frugiperda Reveals The Coiled-Coil Domain At 3.0 Angstrom Resolution gi|118133213|gb|ABK60307.1| moesin [Spodoptera frugiperda] Length = 575 Score = 42.8 bits (99), Expect = 0.097, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 50/138 (36%), Gaps = 11/138 (7%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS---------AQ 57 +RQ E ++ + +L + IL L+E+ R L E++ R+N Sbjct: 344 LRQMQEEMERSQA--NLLEAQDMILRLEEQLRQLQAAKEELEQRQNELQAMMQRLEETKN 401 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + A + + A + E S +++++ + + E + ++ + T Sbjct: 402 MEAAERQKLEDEIRAKQEEVSRIQQEVELKDSETRRLQEEVEDARRKQDEAAAALLAATT 461 Query: 118 SANENILIRSVGKKPSAI 135 + ++ R+ Sbjct: 462 PQHHHVAERADTDPDHDN 479 >gi|148545068|ref|YP_001272438.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus reuteri DSM 20016] gi|148532102|gb|ABQ84101.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Lactobacillus reuteri DSM 20016] Length = 601 Score = 42.8 bits (99), Expect = 0.098, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 72/201 (35%), Gaps = 9/201 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D GA A + R + +++ID ++ GY V P+L+ +A Sbjct: 203 NQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVAD-GYQHVYTPVLMNLDAYKT 261 Query: 209 TGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 +G + DDMF D L P + S +Y H I + LPLR L R Sbjct: 262 SGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRY 321 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 E A G+ R + + + + +E ++L + + D+ L Sbjct: 322 EKSGALS---GLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIMSVYEDFDITDYSFRLS 378 Query: 324 TGDLGFSACKTYDLEVWLAGQ 344 D + E+W Q Sbjct: 379 LRDPKNVKKYYANDEMWEKSQ 399 >gi|329664672|ref|NP_001193189.1| TATA element modulatory factor [Bos taurus] gi|297488534|ref|XP_002697005.1| PREDICTED: TATA element modulatory factor 1-like [Bos taurus] gi|296474994|gb|DAA17109.1| TATA element modulatory factor 1-like [Bos taurus] Length = 1092 Score = 42.8 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--IAE 64 ++ + + L R + ++ + DE+ R L+++ E + ++ NS I + + Sbjct: 524 KKEIKSIKEELATRLNSSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRTKDK 583 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 N +++ L + L+E+L L++ K+ I Sbjct: 584 ENENIIAKLNKKVQELEEELQHLKQVLDGKEEVEKQHRENIK 625 >gi|195436392|ref|XP_002066152.1| GK22086 [Drosophila willistoni] gi|194162237|gb|EDW77138.1| GK22086 [Drosophila willistoni] Length = 1689 Score = 42.8 bits (99), Expect = 0.100, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 13/107 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1195 LDPEMERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIREL 1244 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 Q E +LV+ + S + E+L +E E K+ ++ + Sbjct: 1245 EQLQNEKRKALVEHEHAKLSEIDERLKSELREWREQLVPRKQQLNSM 1291 >gi|148688262|gb|EDL20209.1| mCG14319, isoform CRA_b [Mus musculus] Length = 626 Score = 42.8 bits (99), Expect = 0.100, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 11/107 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQIGQAIAEGNL 67 + A +KR+ E +L++ R L ++ E + N + + EG Sbjct: 512 QEYMEAQEKRNKE-------NLEQLRRKLEQEREQLIKDHNMMLEKLTKEQKTFREEGYK 564 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + + L+ E L + +++ + S+ + + P E Sbjct: 565 TQAEELRREIHQLGHNIKEMKQNGDSLVESILRSWFSFISPPSESEK 611 >gi|238507994|ref|XP_002385198.1| hypothetical protein AFLA_009530 [Aspergillus flavus NRRL3357] gi|220688717|gb|EED45069.1| hypothetical protein AFLA_009530 [Aspergillus flavus NRRL3357] Length = 1686 Score = 42.8 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 21/203 (10%), Positives = 54/203 (26%), Gaps = 22/203 (10%) Query: 4 IQWIRQNPEHLDIALK-------------KRHLEPQSEYILSLDEKNRILIKKIEDIRAR 50 ++ ++++ E D +K KR ++ ++ + +L++ + K ED R Sbjct: 1267 LKSLQEDLERRDQGMKEHEKKRQHDLEEAKRKVKENNDKLAALEKDVKDAKKNKEDAEKR 1326 Query: 51 -RNSNSA------QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 RN +I + L+N+ + + LE + ++ Sbjct: 1327 YRNELKKQQEERNEIVARKRREYEEKLRKLENDERDYRTKKENLEATHRTNYGEKETALA 1386 Query: 104 CIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSG 161 + + + + G D + A Sbjct: 1387 WFKQHKEDTWNDFQKAQKTMHDWDDRWNNASWLDKSFDVNLKAGVNKAKWDLNVAAAAWV 1446 Query: 162 ARFSVLTGHLAHLERALGQFMID 184 G + ++ Sbjct: 1447 GVTKAEEGFVEFTHWPAYNALMQ 1469 >gi|194467309|ref|ZP_03073296.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194454345|gb|EDX43242.1| threonyl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 601 Score = 42.8 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 72/201 (35%), Gaps = 9/201 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D GA A + R + +++ID ++ GY V P+L+ +A Sbjct: 203 NQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVAD-GYQHVYTPVLMNLDAYKT 261 Query: 209 TGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 +G + DDMF D L P + S +Y H I + LPLR L R Sbjct: 262 SGHWEHYRDDMFPPMDMGDGEMLELRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRY 321 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 E A G+ R + + + + +E ++L + + D+ L Sbjct: 322 EKSGALS---GLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIMSVYEDFDITDYSFRLS 378 Query: 324 TGDLGFSACKTYDLEVWLAGQ 344 D + E+W Q Sbjct: 379 LRDPKNVKKYYANDEMWEKSQ 399 >gi|332885366|gb|EGK05615.1| threonyl-tRNA synthetase [Dysgonomonas mossii DSM 22836] Length = 650 Score = 42.8 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 45/167 (26%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEII-- 245 + Y +V P + +G K+ D F + + EI Sbjct: 287 KFEYQQVMTPHIGSKLLYVTSGHYAKYGQDSFQPIHTPEEGEEFLLKPMNCPHHCEIYKI 346 Query: 246 ---ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + LPLR +R E + G+ R F + + E E ++ Sbjct: 347 VPRSYRDLPLRMAEFGTVYRYEQSG---ELHGLTRVRGFTQDDAHIFCTPEQLKEEFLKV 403 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + I K L+ + D W + E Sbjct: 404 MDIVFIIFKALNFENFEAQISLRDPNNREKYIGSDANWEKAERAIIE 450 >gi|160881955|ref|YP_001560923.1| prolyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|259511590|sp|A9KL35|SYP_CLOPH RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|160430621|gb|ABX44184.1| prolyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 477 Score = 42.8 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 80/217 (36%), Gaps = 24/217 (11%) Query: 223 TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFW 282 + + PTSE + YSH I + LP + R E + TR LR +F Sbjct: 107 QERLCVRPTSETLFCDFYSHIIESYRDLPKLYNQWCSVVRWE-----KTTRPFLRTLEFL 161 Query: 283 KCE--LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 E T EE + + A+ + L + + A TY +E Sbjct: 162 WQEGHTAHATAEEAEERTIQMLNLYADFCEEVLAIPMVRGRKTDKEKFAGAEATYTIEAL 221 Query: 341 LAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH-TLNGSGVAVGRCLIAILEN 399 + + + G+ ++ N +Y D +K L++ H T S R + A++ Sbjct: 222 M-HDGKALQSGTSHNFGDGFAKAFNIQYTDKENK-LQYVHQT---SWGMTTRLIGALIMV 276 Query: 400 YLNADGSVTIPT------VLRPYMNNLAVIKKEHILE 430 + + G V P V+ P M KKE +LE Sbjct: 277 HGDNSGLVLPPRIAPTQVVIVPIMQ-----KKEGVLE 308 >gi|15924555|ref|NP_372089.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|15927145|ref|NP_374678.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|21283246|ref|NP_646334.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49483813|ref|YP_041037.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|49486400|ref|YP_043621.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|57651958|ref|YP_186462.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87161756|ref|YP_494220.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195373|ref|YP_500177.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268049|ref|YP_001246992.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394117|ref|YP_001316792.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|151221680|ref|YP_001332502.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|156979883|ref|YP_001442142.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|161509793|ref|YP_001575452.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140015|ref|ZP_03564508.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253314936|ref|ZP_04838149.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732218|ref|ZP_04866383.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733185|ref|ZP_04867350.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|255006351|ref|ZP_05144952.2| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425690|ref|ZP_05602114.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428351|ref|ZP_05604749.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430988|ref|ZP_05607368.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257433676|ref|ZP_05610034.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257436590|ref|ZP_05612634.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|257793641|ref|ZP_05642620.1| glycyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258411059|ref|ZP_05681339.1| glycyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258420137|ref|ZP_05683092.1| glycyl-tRNA synthetase [Staphylococcus aureus A9719] gi|258437397|ref|ZP_05689381.1| glycyl-tRNA synthetase [Staphylococcus aureus A9299] gi|258443603|ref|ZP_05691942.1| glycyl-tRNA synthetase [Staphylococcus aureus A8115] gi|258446810|ref|ZP_05694964.1| glycyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258448724|ref|ZP_05696836.1| glycyl-tRNA synthetase [Staphylococcus aureus A6224] gi|258450606|ref|ZP_05698668.1| glycyl-tRNA synthetase [Staphylococcus aureus A5948] gi|258453541|ref|ZP_05701519.1| glycyl-tRNA synthetase [Staphylococcus aureus A5937] gi|262049140|ref|ZP_06022017.1| glycyl-tRNA synthetase [Staphylococcus aureus D30] gi|262051164|ref|ZP_06023388.1| glycyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|269203193|ref|YP_003282462.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282893066|ref|ZP_06301300.1| glycyl-tRNA synthetase [Staphylococcus aureus A8117] gi|282904147|ref|ZP_06312035.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282905974|ref|ZP_06313829.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908884|ref|ZP_06316702.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911203|ref|ZP_06319005.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914372|ref|ZP_06322158.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282916835|ref|ZP_06324593.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|282919341|ref|ZP_06327076.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282920114|ref|ZP_06327839.1| glycyl-tRNA synthetase [Staphylococcus aureus A9765] gi|282924666|ref|ZP_06332334.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282928198|ref|ZP_06335803.1| glycyl-tRNA synthetase [Staphylococcus aureus A10102] gi|283770641|ref|ZP_06343533.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|283958329|ref|ZP_06375780.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|284024624|ref|ZP_06379022.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|293503446|ref|ZP_06667293.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293510463|ref|ZP_06669169.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293531003|ref|ZP_06671685.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|294848596|ref|ZP_06789342.1| glycyl-tRNA synthetase [Staphylococcus aureus A9754] gi|295406688|ref|ZP_06816493.1| glycyl-tRNA synthetase [Staphylococcus aureus A8819] gi|295428143|ref|ZP_06820775.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275813|ref|ZP_06858320.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297207716|ref|ZP_06924151.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245730|ref|ZP_06929595.1| glycyl-tRNA synthetase [Staphylococcus aureus A8796] gi|297590891|ref|ZP_06949529.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|300911797|ref|ZP_07129240.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|304380846|ref|ZP_07363506.1| glycyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54039670|sp|P67035|SYG_STAAW RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|54039676|sp|P99129|SYG_STAAN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|54042030|sp|P67034|SYG_STAAM RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|56749385|sp|Q6G902|SYG_STAAS RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|56749414|sp|Q6GGD5|SYG_STAAR RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|71153560|sp|Q5HFJ5|SYG_STAAC RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|123291788|sp|Q2FY08|SYG_STAA8 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|123749609|sp|Q2FGF8|SYG_STAA3 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|166227939|sp|A7X2W2|SYG_STAA1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|172048905|sp|A6QHA8|SYG_STAAE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|189082278|sp|A6U237|SYG_STAA2 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|189082279|sp|A5IT93|SYG_STAA9 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|189082280|sp|A8Z4A4|SYG_STAAT RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|13701363|dbj|BAB42657.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|14247336|dbj|BAB57727.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|21204686|dbj|BAB95382.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49241942|emb|CAG40637.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|49244843|emb|CAG43304.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|57286144|gb|AAW38238.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87127730|gb|ABD22244.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202931|gb|ABD30741.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741118|gb|ABQ49416.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149946569|gb|ABR52505.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|150374480|dbj|BAF67740.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|156722018|dbj|BAF78435.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|160368602|gb|ABX29573.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724007|gb|EES92736.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728725|gb|EES97454.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257271384|gb|EEV03530.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275192|gb|EEV06679.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278418|gb|EEV09054.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257281769|gb|EEV11906.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257283941|gb|EEV14064.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|257787613|gb|EEV25953.1| glycyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257840209|gb|EEV64673.1| glycyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257843848|gb|EEV68242.1| glycyl-tRNA synthetase [Staphylococcus aureus A9719] gi|257848602|gb|EEV72590.1| glycyl-tRNA synthetase [Staphylococcus aureus A9299] gi|257851009|gb|EEV74952.1| glycyl-tRNA synthetase [Staphylococcus aureus A8115] gi|257854385|gb|EEV77334.1| glycyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257858002|gb|EEV80891.1| glycyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257861764|gb|EEV84563.1| glycyl-tRNA synthetase [Staphylococcus aureus A5948] gi|257864272|gb|EEV87022.1| glycyl-tRNA synthetase [Staphylococcus aureus A5937] gi|259160801|gb|EEW45821.1| glycyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|259162809|gb|EEW47374.1| glycyl-tRNA synthetase [Staphylococcus aureus D30] gi|262075483|gb|ACY11456.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|269941055|emb|CBI49439.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] gi|282313501|gb|EFB43896.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282317151|gb|EFB47525.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282319322|gb|EFB49674.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|282321553|gb|EFB51878.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282324898|gb|EFB55208.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327148|gb|EFB57443.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331266|gb|EFB60780.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282590005|gb|EFB95087.1| glycyl-tRNA synthetase [Staphylococcus aureus A10102] gi|282594462|gb|EFB99447.1| glycyl-tRNA synthetase [Staphylococcus aureus A9765] gi|282595765|gb|EFC00729.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282764384|gb|EFC04510.1| glycyl-tRNA synthetase [Staphylococcus aureus A8117] gi|283460788|gb|EFC07878.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|283470843|emb|CAQ50054.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] gi|283790478|gb|EFC29295.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|285817247|gb|ADC37734.1| Glycyl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|290920271|gb|EFD97337.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291095112|gb|EFE25377.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291466827|gb|EFF09347.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|294824622|gb|EFG41045.1| glycyl-tRNA synthetase [Staphylococcus aureus A9754] gi|294968435|gb|EFG44459.1| glycyl-tRNA synthetase [Staphylococcus aureus A8819] gi|295128501|gb|EFG58135.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296887733|gb|EFH26631.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177381|gb|EFH36633.1| glycyl-tRNA synthetase [Staphylococcus aureus A8796] gi|297575777|gb|EFH94493.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|300886043|gb|EFK81245.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|302333241|gb|ADL23434.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159] gi|302751396|gb|ADL65573.1| putative glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340573|gb|EFM06507.1| glycyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829953|emb|CBX34795.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129843|gb|EFT85833.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03] gi|315195467|gb|EFU25854.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00] gi|315198740|gb|EFU29068.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01] gi|320140550|gb|EFW32404.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|320144087|gb|EFW35856.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] gi|323440463|gb|EGA98175.1| glycyl-tRNA synthetase [Staphylococcus aureus O11] gi|323443237|gb|EGB00855.1| glycyl-tRNA synthetase [Staphylococcus aureus O46] gi|329727248|gb|EGG63704.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] gi|329728442|gb|EGG64879.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] gi|329733064|gb|EGG69401.1| glycine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 463 Score = 42.8 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 16/184 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + L L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASDWLTSLNMSSENMRLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNFQSRR------MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 E+ ++ +F R+ + RY DP + + + S A R +A L + Sbjct: 289 GELWGIASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGA-DRVTLAFLCDAY 347 Query: 402 NADG 405 + +G Sbjct: 348 DEEG 351 >gi|261880448|ref|ZP_06006875.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361] gi|270332871|gb|EFA43657.1| threonine-tRNA ligase [Prevotella bergensis DSM 17361] Length = 521 Score = 42.8 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 53/167 (31%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC------TTDGRWLIPTSEVSLTNLYSH 242 + Y EV AP + +G + D F + L P + +Y+ Sbjct: 160 PYNYQEVIAPGIGSKNLYVTSGHYAHYGKDAFQPIRTPEEDEEYMLKPMNCPHHCEIYAR 219 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + K LPLR R E + G+ R F + + R E E E + Sbjct: 220 KPRSYKDLPLRIAEFGTVMRYEKSG---ELHGLTRVRSFTQDDAHIFVRPEQVKAEFENV 276 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + +++ + D + E+W QN RE Sbjct: 277 IDIIQKVFAIFGFDNYEAQISLRDPKDTDKYIGSDEIWEESQNAIRE 323 >gi|256824985|ref|YP_003148945.1| prolyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] gi|256688378|gb|ACV06180.1| prolyl-tRNA synthetase, family II [Kytococcus sedentarius DSM 20547] Length = 596 Score = 42.8 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 9/148 (6%) Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW----LIPTSEVSLTNLYSHEIIESK 248 E++ P L+ E + + ++ DD+F TD + L PT E T K Sbjct: 69 QEIAFPSLLPREPYEASNRWTEYGDDLFRLTDRKGADMLLGPTHEEMFTLAVKDLYTSYK 128 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAE 307 LPL + P +R E R G+LR +F + S +E ++R Sbjct: 129 DLPLGLFQILPKYRDE----LRPRAGVLRGREFTMKDAYSFDVDEAGLEAAYQRHRKAYT 184 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTY 335 + RL Y V +G +G SA + + Sbjct: 185 RVFDRLGFEYVAVHADSGAMGGSASEEF 212 >gi|148688264|gb|EDL20211.1| mCG14319, isoform CRA_d [Mus musculus] Length = 631 Score = 42.8 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 11/107 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQIGQAIAEGNL 67 + A +KR+ E +L++ R L ++ E + N + + EG Sbjct: 517 QEYMEAQEKRNKE-------NLEQLRRKLEQEREQLIKDHNMMLEKLTKEQKTFREEGYK 569 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + + L+ E L + +++ + S+ + + P E Sbjct: 570 TQAEELRREIHQLGHNIKEMKQNGDSLVESILRSWFSFISPPSESEK 616 >gi|82751168|ref|YP_416909.1| glycyl-tRNA synthetase [Staphylococcus aureus RF122] gi|123768505|sp|Q2YT14|SYG_STAAB RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|82656699|emb|CAI81126.1| glycyl-tRNA synthetase [Staphylococcus aureus RF122] Length = 463 Score = 42.8 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 16/184 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + L L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASDWLTSLNMSSENMRLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNFQSRR------MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 E+ ++ +F R+ + RY DP + + + S A R +A L + Sbjct: 289 GELWGIASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGA-DRVTLAFLCDAY 347 Query: 402 NADG 405 + +G Sbjct: 348 DEEG 351 >gi|169842516|ref|ZP_02875621.1| seryl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 36 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 23/33 (69%), Positives = 26/33 (78%) Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 L L YRVV+LC+GDLGFSA KTYDLEVW+ Sbjct: 4 NSALQLPYRVVALCSGDLGFSAAKTYDLEVWVP 36 >gi|141603886|gb|ABO88216.1| guanylate binding protein 4.1 [Mus musculus] Length = 631 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 11/107 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQIGQAIAEGNL 67 + A +KR+ E +L++ R L ++ E + N + + EG Sbjct: 517 QEYMEAQEKRNKE-------NLEQLRRKLEQEREQLIKDHNMMLEKLTKEQKTFREEGYK 569 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + + L+ E L + +++ + S+ + + P E Sbjct: 570 TQAEELRREIHQLGHNIKEMKQNGDSLVESILRSWFSFISPPSESEK 616 >gi|253581047|ref|ZP_04858308.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847710|gb|EES75679.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 479 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 86/263 (32%), Gaps = 22/263 (8%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK----- 214 + + + + Q +D E G V P+ + + + + Sbjct: 35 TSVKGCMAIKPAGYAIWENIQHELDRRFKETGVQNVYMPIFIPESLLQKEKDHVEGFAPE 94 Query: 215 ----FADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGR 270 + + + PTSE + Y+ EI + LP + R E + Sbjct: 95 VAWVTHGGLDPLQERLCVRPTSETLFCDFYAKEIQSHRDLPKVYNQWCSVVRWE-----K 149 Query: 271 DTRGMLRQHQFWKCE--LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG 328 TR LR +F E T EE + + A+ + L + + Sbjct: 150 TTRPFLRSREFLWQEGHTAHATAEEAEERTIQMLNLYADFCEEVLAIPVIKGQKTDKEKF 209 Query: 329 FSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTH-TLNGSGV 387 A TY +E + + + G+ +R +Y D +K L++ H T S Sbjct: 210 SGAEATYTIESLM-HDGKALQSGTSHNFGDGFARAFGIQYTDKENK-LQYVHQT---SWG 264 Query: 388 AVGRCLIAILENYLNADGSVTIP 410 R + AI+ + + G V P Sbjct: 265 MTTRMIGAIIMVHGDNSGLVLPP 287 >gi|212640589|ref|YP_002317109.1| glycyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|212562069|gb|ACJ35124.1| Glycyl-tRNA synthetase (class II) [Anoxybacillus flavithermus WK1] Length = 460 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 173 TAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + E+ L L + + L +L + T D+E + Sbjct: 229 KPGEELQWFDYWRQYCEQWLLSLGMKRENIRLRDHSEDELSHYSNATTDIEYKFPF--GW 286 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ ++ RR Sbjct: 287 GELWGIASRTDYDLRR 302 >gi|185179115|ref|ZP_02964840.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024051|ref|ZP_02996803.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518364|ref|ZP_03003871.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225551314|ref|ZP_03772260.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|184209012|gb|EDU06055.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019085|gb|EDU57125.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998237|gb|EDU67334.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225379129|gb|EEH01494.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 580 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 7/174 (4%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL- 236 Q I+ + + V P+L + +G + D++F ++ ++ Sbjct: 214 VQKFINEVEFQFNFDTVITPILGSIDLYKTSGHWDHYKDNIFSPVQIDNEVLILRPMTCP 273 Query: 237 --TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 T +YS+E+ +SLP+R + + R E+ G R + + R + Sbjct: 274 HHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLT---GFERVREMILEDCHVFCRPDQ 330 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 E +E + L + + L D D ++W QN R Sbjct: 331 IEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPNDKEKYYDDPQMWEHSQNTLR 384 >gi|297696632|ref|XP_002825491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like isoform 1 [Pongo abelii] Length = 1118 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|260591354|ref|ZP_05856812.1| conserved hypothetical protein [Prevotella veroralis F0319] gi|260536720|gb|EEX19337.1| conserved hypothetical protein [Prevotella veroralis F0319] Length = 622 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 45/96 (46%), Gaps = 19/96 (19%) Query: 8 RQNPEHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRN---------SNS 55 R+ ++ LKK R ++ +LD + L+++ E ++ N S S Sbjct: 533 RKRVDNFRNNLKKVANRGVD-------ALDNERGRLMRRFEQLKQEINTYENNLGFLSIS 585 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 ++ G ++ + ++ LKN+ + +K+++ ++ E Sbjct: 586 SKKGNSLIDEMNRRIEKLKNDMNEVKQKIKAIDAEN 621 >gi|221468633|ref|NP_001137752.1| Sterile20-like kinase, isoform F [Drosophila melanogaster] gi|220902373|gb|ACL83205.1| Sterile20-like kinase, isoform F [Drosophila melanogaster] Length = 1635 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 35/288 (12%), Positives = 92/288 (31%), Gaps = 32/288 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1202 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 1251 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 Q E +LV+ ++ S + E+L +E E K+ ++ + +++ Sbjct: 1252 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQELNRQIKLAIDQHEKRFG 1311 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + + ++ L + +R++++ + ++ +L Sbjct: 1312 L-----------VTNREEFEDQEVKLPAHLRNIYNERSSRILPRNTFIDPQNMPRSRSSL 1360 Query: 179 GQFMIDLHTSEHGYTEV--------SAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 + + + P++ + + G D+ ++ Sbjct: 1361 LMMGGGGNRLSNFRGSAPDLSRSVPNTPIMHKQQRSQMIGDQVLEEDEEQMLSEQMKRAS 1420 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 + + N + ++ T P S + + R Sbjct: 1421 VATLPAQNQLRLITQLPANELVKVVTSTPPLNSAEDVNSKPSMSTFRG 1468 >gi|158258232|dbj|BAF85089.1| unnamed protein product [Homo sapiens] Length = 1118 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|218132749|ref|ZP_03461553.1| hypothetical protein BACPEC_00610 [Bacteroides pectinophilus ATCC 43243] gi|217992475|gb|EEC58478.1| hypothetical protein BACPEC_00610 [Bacteroides pectinophilus ATCC 43243] Length = 477 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 91/285 (31%), Gaps = 27/285 (9%) Query: 143 EIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE-----VSA 197 + E D K +S + G + + H + + V Sbjct: 13 SMEEDFAQWYTDVVKKADLMCYSSVKGCMIFKPDGYAIWENIQHELDRRFKATGVKNVYM 72 Query: 198 PLLVRDEAMYGTGQIPK---------FADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESK 248 P+ + + + + + + + PTSE + Y +EI + Sbjct: 73 PMFIPESLLQREKDHVEGFAPEVAWVTEGGLQPLQEKMCVRPTSETLFCDYYKNEIQSYR 132 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC--A 306 LP R E ++TR LR +F E + + + + A Sbjct: 133 DLPQLCNQWCSVVRWE-----KETRPFLRSREFLWQEGHTAHATAEEAEARTQQMLNLYA 187 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNS 366 + + + L + + A TY +E + + + G+ ++ Sbjct: 188 DFVEEVLAIPVIKGRKTDKEKFAGAEATYTIEALM-HDGKALQSGTSHNFGDGFAKAFGI 246 Query: 367 RYRDPNSKSLKFTH-TLNGSGVAVGRCLIAILENYLNADGSVTIP 410 +Y D ++K LK+ H T S R + A++ + + G V P Sbjct: 247 QYTDKDNK-LKYVHQT---SWGMTTRLIGALIMVHGDNSGLVLPP 287 >gi|240274490|gb|EER38006.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H143] Length = 550 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 66/206 (32%), Gaps = 28/206 (13%) Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL-----GQFMIDLH 186 P S+ H ++ ++ ++ G L + Sbjct: 75 PHHDTYSQTHTLPPADHRVVGTEQELFVTSQ---YSPGSPLFLPNGTHILNKLTSFLRAQ 131 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----------------DGRWLI 229 +++G+ EV P + + +G + DDM+ + L Sbjct: 132 YTQYGFLEVLTPSIYKKSLWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLK 191 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 P + L+ + + LPLR+ +P R+E + G+ R +F + + Sbjct: 192 PMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLS---GLTRVRRFHQDDGHIF 248 Query: 290 TREEDSFTEHERMLSCAEEILKRLDL 315 R + +E E L + +++ Sbjct: 249 CRPQQIGSEIESALKFTDTVMRTFGF 274 >gi|60360642|dbj|BAD90331.1| mKIAA4245 protein [Mus musculus] Length = 606 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 11/107 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQIGQAIAEGNL 67 + A +KR+ E +L++ R L ++ E + N + + EG Sbjct: 492 QEYMEAQEKRNKE-------NLEQLRRKLEQEREQLIKDHNMMLEKLTKEQKTFREEGYK 544 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + + L+ E L + +++ + S+ + + P E Sbjct: 545 TQAEELRREIHQLGHNIKEMKQNGDSLVESILRSWFSFISPPSESEK 591 >gi|270009884|gb|EFA06332.1| hypothetical protein TcasGA2_TC009203 [Tribolium castaneum] Length = 897 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 10/102 (9%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYI------LSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 IR+N + L K+ L Q + + + K R L K+E ++++ ++I Sbjct: 52 IRKNI--IISRLAKKSLRDQQDEFDYSIREIDIYAKKRKLESKVERLQSQIEEKESEIDD 109 Query: 61 AIAEGNL--SLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + L + +D +K + E+ +LEK+ + + L Sbjct: 110 LLKNNKLTYATIDNMKAKIRENLEKRFLLEKKAQVLEADLNH 151 >gi|225459089|ref|XP_002283825.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1293 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 31/275 (11%), Positives = 71/275 (25%), Gaps = 47/275 (17%) Query: 15 DIALKKRHLEPQS--------EYILSLDEKNRILIKKIEDIR------------------ 48 A KR + + +L L+++ + L K+IE++R Sbjct: 569 KEAEMKRFASADTSVLKLHYEKKLLELEQEKKALQKEIEELRHDLASISSTSDDGAQKLK 628 Query: 49 ----ARRNSNSAQIGQAIAE------------GNLSLVDALKNETSTLKEQLP--ILEKE 90 + N Q+ + + + L++E +K Q + + Sbjct: 629 EDYLQKLNVLEKQVSELKKKQDAQSQLLRQKQKSDEAAKRLQDEIQRIKSQKVQLQHKIK 688 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + L K + L++ + L+ ++ + E + Sbjct: 689 QESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASMATKRLK 748 Query: 151 MDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG 210 + S G+ ++ +D V V + T Sbjct: 749 ELLESRKASSRETLGAGNGNGPGVQHFSISSCLDACL---SRDLVKYYRFVSSTLLTNTL 805 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEII 245 + A + + EV + E Sbjct: 806 FYIEKALMQAIEHELEVTVRVHEVRSQYEHQMEER 840 >gi|195489607|ref|XP_002092807.1| GE11466 [Drosophila yakuba] gi|194178908|gb|EDW92519.1| GE11466 [Drosophila yakuba] Length = 1703 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 13/102 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1202 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 1251 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 Q E +LV+ ++ S + E+L +E E K+ Sbjct: 1252 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQ 1293 >gi|115524346|ref|YP_781257.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] gi|115518293|gb|ABJ06277.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Rhodopseudomonas palustris BisA53] Length = 679 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 90/294 (30%), Gaps = 30/294 (10%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDI-------RARRNSNSAQIGQAIAEGNLSLVDAL 73 R+ E ++++K R +I + + R + G+ + LVDA+ Sbjct: 133 RNEPFTPEDFAAIEKKMREIIAR-DKPFTKDVWDREKTKQVFRDKGELFK---VELVDAI 188 Query: 74 -KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 N+ + Q + +S K+ + + + +N +L R G Sbjct: 189 PGNDPIKIYNQGEWFDLCRGPHMTSTGKIGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAF 248 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS---- 188 + + + E D + + G A G + + Sbjct: 249 AKQEDLDAYLKQIEEAEKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQALIAYMRR 308 Query: 189 --EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEVSLT 237 Y EV+AP ++ +G + ++MF L P + Sbjct: 309 RLAGDYDEVNAPQILDKVLWETSGHWDWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHI 368 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 +Y H + + LPLR R E A G++R F + + Sbjct: 369 QIYKHGLKSYRDLPLRMAEFGIVHRYEPSGA---MHGLMRVRGFTQDDAHVFCT 419 >gi|297621024|ref|YP_003709161.1| hypothetical protein wcw_0788 [Waddlia chondrophila WSU 86-1044] gi|297376325|gb|ADI38155.1| hypothetical protein wcw_0788 [Waddlia chondrophila WSU 86-1044] Length = 1043 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 11/86 (12%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIE---------DIRARRNSNSAQIGQAIAE 64 L++ + P + I +DEK R +E ++R N + Q+ + E Sbjct: 885 YKEMLEE--IVPNRDEIKRIDEKLRQAKSALEKKMEEGNLPELRKSVNELNRQLSKVRIE 942 Query: 65 GNLSLVDALKNETSTLKEQLPILEKE 90 N+ V L E ++ +L E+ Sbjct: 943 RNVEEVTRLTKELEEVRTKLKNEEER 968 >gi|148688263|gb|EDL20210.1| mCG14319, isoform CRA_c [Mus musculus] Length = 644 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 11/107 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQIGQAIAEGNL 67 + A +KR+ E +L++ R L ++ E + N + + EG Sbjct: 530 QEYMEAQEKRNKE-------NLEQLRRKLEQEREQLIKDHNMMLEKLTKEQKTFREEGYK 582 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + + L+ E L + +++ + S+ + + P E Sbjct: 583 TQAEELRREIHQLGHNIKEMKQNGDSLVESILRSWFSFISPPSESEK 629 >gi|195586613|ref|XP_002083068.1| GD24899 [Drosophila simulans] gi|194195077|gb|EDX08653.1| GD24899 [Drosophila simulans] Length = 1771 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1288 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1347 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1348 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1375 >gi|195353105|ref|XP_002043046.1| GM11840 [Drosophila sechellia] gi|194127134|gb|EDW49177.1| GM11840 [Drosophila sechellia] Length = 1703 Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 36/293 (12%), Positives = 91/293 (31%), Gaps = 32/293 (10%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1202 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 1251 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 Q E +LV+ ++ S + E+L +E E K+ ++ + +++ Sbjct: 1252 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQELNRQIKLVIDQHEKRFG 1311 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + + ++ L + +R++++ + ++ +L Sbjct: 1312 LVA-----------NREEFEDQEVKLPAHLRNIYNERSSRILPRNTFIDPQNMPRSRSSL 1360 Query: 179 GQFMIDLHTSEHGYTEV--------SAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 + + S P++ + + D+ ++ Sbjct: 1361 LMMGGGGNRLSNFRGSAPDLSRSVPSTPIMHKQQRSQMISDQVLEEDEEQMLSEQMKRAS 1420 Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 + + N + ++ T P S + R K Sbjct: 1421 VATLPAQNQLRLITQLPANELVKVVTSTPPLNSAEDVNSKPAMSTFRGSTPHK 1473 >gi|195054655|ref|XP_001994240.1| GH23578 [Drosophila grimshawi] gi|193896110|gb|EDV94976.1| GH23578 [Drosophila grimshawi] Length = 1706 Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 62/428 (14%), Positives = 129/428 (30%), Gaps = 44/428 (10%) Query: 23 LEPQSEYILSLDEKNRIL---------IKKI----------EDIRARRNSNSAQIGQAIA 63 ++P+ + +L+L + + L ++ E + N+ ++ A + Sbjct: 1070 IDPEVKTLLALKAEYKKLSGKDWTPDAKAEVKEEMAPPAGNEQLTLDINAQGEKVRAAKS 1129 Query: 64 EGN-----LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + V L + KE + P P + S Sbjct: 1130 SKAAKEIIDAEVSKLLALKAKYKEVTGTDFPVAGRGGGGGGGAVKKAPKEPQPKPAKKES 1189 Query: 119 ANENILIRSVGKKPSA---IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 A S G K + S+E ++ + + ++ Sbjct: 1190 AAAAKPDASSGVKKQTRLGLEASKEDNLPEWYSQVLTKGELIEYYDVSGCYILRPWSYAI 1249 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT-GQIPKFADDMFCTTDGRW------- 227 + D + G E P+ V A+ I F+ ++ T Sbjct: 1250 WKSIRNWFDAEITRSGVKECYFPIFVSKAALEREKSHIADFSPEVAWVTKSGESDLAEPI 1309 Query: 228 -LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 + PTSE + Y+ + + LP+R R E + + LR +F E Sbjct: 1310 AIRPTSETGMYPAYAKWVQSYRDLPIRLNQWNNVVRWE----FKHPQPFLRTREFLWQEG 1365 Query: 287 V--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + E E + A+ L + + T +E +++ Sbjct: 1366 HSAFANKSEAEAEVLEMLELYAQVYTDLLAIPVVKGRKTEKEKFAGGNYTTTVEAFISAS 1425 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNAD 404 + ++ G S+ + Y DP ++ +F + N G+ R + ++ + + Sbjct: 1426 GRAIQGATSHHLGQNFSKMFDIVYEDPETQQKQFVYQ-NSWGI-TTRTIGVMIMVHADNQ 1483 Query: 405 GSVTIPTV 412 G V P V Sbjct: 1484 GLVLPPHV 1491 >gi|40789062|dbj|BAA06225.2| KIAA0055 [Homo sapiens] Length = 1120 Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 96 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 151 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 152 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 211 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 212 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 258 >gi|326204332|ref|ZP_08194191.1| methyl-accepting chemotaxis sensory transducer [Clostridium papyrosolvens DSM 2782] gi|325985607|gb|EGD46444.1| methyl-accepting chemotaxis sensory transducer [Clostridium papyrosolvens DSM 2782] Length = 495 Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 45/119 (37%), Gaps = 6/119 (5%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA--RRNSN--SAQIGQAIA--E 64 E + +E + L E++ L +IE I +N+ + +I + Sbjct: 337 IEAARAGEAGKGFSVVAEEVRKLAEESNNLTHQIESILKEMEKNALDVTKEIIKEKKYIN 396 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 + S+ + ++ + +K ++ +E + + + + L E + I + +N Sbjct: 397 NSKSVTEKTRDIFNQIKGEIHTIEIKNNHIKDTSYDLYKSFELTDDEVLLISNNTEKNA 455 >gi|255957075|ref|XP_002569290.1| Pc21g23230 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591001|emb|CAP97220.1| Pc21g23230 [Penicillium chrysogenum Wisconsin 54-1255] Length = 515 Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 86/261 (32%), Gaps = 27/261 (10%) Query: 105 IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 + ++P + + I S KP A + + + Sbjct: 15 VKSLPWQFTRSRQLSYTAIRHCSCSDKPEAPTIPPTDHRALGTAQELFTSS---VYSPGS 71 Query: 165 SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-- 222 + + H+ L F+ + ++G+ EV P + + +G + DDM+ Sbjct: 72 PLFLPNGTHVVNKLISFLRTQYL-QYGFREVLTPTIYKKSLWEISGHWQNYKDDMYEVTG 130 Query: 223 -------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAG 269 + L P + L+ + + +P+R+ +P R+E + Sbjct: 131 RGASGEADGEVGEDESYGLKPMNCPGHCLLFKSQNHSYRDMPVRYADFSPLHRNEVSGSL 190 Query: 270 RDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL-HYRVVSLCTGDLG 328 G+ R +F + + R + +E L + +K L YR+V + Sbjct: 191 T---GLTRVRRFHQDDGHIFCRRQQIKSEIASALGFVDMAMKTFGLGPYRLVLSTRPETD 247 Query: 329 FSACKTYDLEVWLAGQNLYRE 349 + LE+W + RE Sbjct: 248 YIGT----LEMWDNAEMQLRE 264 >gi|195586376|ref|XP_002082950.1| GD24961 [Drosophila simulans] gi|194194959|gb|EDX08535.1| GD24961 [Drosophila simulans] Length = 1703 Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 13/102 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1202 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 1251 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 Q E +LV+ ++ S + E+L +E E K+ Sbjct: 1252 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQ 1293 >gi|190684690|ref|NP_005145.3| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens] gi|190684692|ref|NP_001122082.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens] gi|190684694|ref|NP_001122083.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens] gi|731046|sp|P40818|UBP8_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName: Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin isopeptidase Y; Short=hUBPy; AltName: Full=Ubiquitin thiolesterase 8; AltName: Full=Ubiquitin-specific-processing protease 8 gi|83405557|gb|AAI10591.1| Ubiquitin specific peptidase 8 [Homo sapiens] gi|119597805|gb|EAW77399.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens] gi|119597806|gb|EAW77400.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens] gi|119597807|gb|EAW77401.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens] gi|168278493|dbj|BAG11126.1| ubiquitin carboxyl-terminal hydrolase 8 [synthetic construct] Length = 1118 Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|194886310|ref|XP_001976587.1| GG19937 [Drosophila erecta] gi|190659774|gb|EDV56987.1| GG19937 [Drosophila erecta] Length = 1703 Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 13/102 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1202 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 1251 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 Q E +LV+ ++ S + E+L +E E K+ Sbjct: 1252 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQ 1293 >gi|225387782|ref|ZP_03757546.1| hypothetical protein CLOSTASPAR_01552 [Clostridium asparagiforme DSM 15981] gi|225046116|gb|EEG56362.1| hypothetical protein CLOSTASPAR_01552 [Clostridium asparagiforme DSM 15981] Length = 462 Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 83/278 (29%), Gaps = 23/278 (8%) Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI---HLSREHFEI 144 E + + + +K + P + I ++ + +G + +E F Sbjct: 40 ELKNNVKKAWWQKFVMESPYNVGVDCAILMNSQTWVASGHLGGFSDPLMDCKQCKERFRA 99 Query: 145 GEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDE 204 + + + + ++ + + Q++ D H + + Sbjct: 100 DKLIEDYNAEHGIEM-------EGSIDGWSQEQMKQYIEDNHICCPSCGAHDFTDIRQFN 152 Query: 205 AMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 M+ T Q +D T T++ N + + K +P + SFR+E Sbjct: 153 LMFKTFQ--GVTEDAKNT--VYLRPETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNE 208 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH---YRVVS 321 R +F + EL + + L+ L + R Sbjct: 209 I----TPGNFTFRTREFEQMELEFFCKPGTDLEWFAYWKQFCIDWLRTLGIKEDEMRARD 264 Query: 322 LCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 +L F + T DLE + E+ + ++ Sbjct: 265 HSPEELCFYSKATTDLEFLFPF--GWGELWGIADRTDY 300 >gi|87240431|gb|ABD32289.1| tRNA-binding arm; t-snare [Medicago truncatula] Length = 992 Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 10/100 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILS--------LDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + + L LK++ E + E + L+ K L K+ + +R +N S Sbjct: 408 EQFKALIEDLKRKSNEAEVESLREEYHQRVSTLERKVYALTKERDTLRREQNKKSD--AA 465 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 A+ + ++ + E L ++ E ++ + ++ Sbjct: 466 ALLKEKDEIITQVMAEGEELSKKQATQESTIRKLRAQIRD 505 >gi|256079688|ref|XP_002576117.1| hypothetical protein [Schistosoma mansoni] gi|238661378|emb|CAZ32352.1| expressed protein [Schistosoma mansoni] Length = 445 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 48/373 (12%), Positives = 104/373 (27%), Gaps = 37/373 (9%) Query: 10 NPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 N E + ++ R H + I+ L ++ + ++I ++ R S Q E N Sbjct: 60 NWESIRTSVNARRMHKRFNIDKIIDLKKQIDGIREQITALKQDRISLQTQY-----EQNN 114 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI---GTSANENIL 124 D +K L+ + LE ++ +K +PN+ P+ Sbjct: 115 QDSDEVKVAARALRSEQKSLEVSFKKLDYEFQKESLHLPNIIHSLTPVGEMKLQNPIKSY 174 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 +++ + E +G R +L + + Sbjct: 175 LKNNHASKKVFWSNLAEDIYNEVIGTYYTGRLAELE----YTHMNKVNDYWLSRMNEGQP 230 Query: 185 LHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF---CTTDGRWLIPTSEVSLTNLYS 241 + V +VR A+ T P + D + ++ L + Sbjct: 231 CN------YPVCLSDIVRGPALEATS-WPSMKSAIRLKPSKNDMLLVEDSNTGISNWLIN 283 Query: 242 HEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHER 301 + + E + L + + EE Sbjct: 284 PHTADYLVGSASLAAFS----GEDSCNMFISLLELTKDWDQCEAGFHLLVEELFRFWQHY 339 Query: 302 MLSC-AEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360 + Y L L + D+E+ + ++S S G++ Sbjct: 340 QPGWSYKLTYTEASDLYSCEMLRAV-LYTDMKTSSDIEISIP-------LASVSLIGDWI 391 Query: 361 SRRMNSRYRDPNS 373 SRR+ ++ + + Sbjct: 392 SRRIMTKIKKTDK 404 >gi|15643303|ref|NP_228347.1| hypothetical protein TM0537 [Thermotoga maritima MSB8] gi|4981051|gb|AAD35622.1|AE001729_2 hypothetical protein TM_0537 [Thermotoga maritima MSB8] Length = 758 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+ E L LK+ ++ + + + L R L+++ ++R R+S +I + E Sbjct: 509 REQEEVLKNTLKEIGVDSE-DKLKVL----RDLLERRANLRKTRDSLEKEIANLMKEKEE 563 Query: 68 SLVDALKNETSTLKEQLPILEKE 90 LK ++ +E E Sbjct: 564 IESSRSNARIEELKREVEQIESE 586 >gi|31873342|emb|CAD97662.1| hypothetical protein [Homo sapiens] Length = 1118 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|321312572|ref|YP_004204859.1| hypothetical protein BSn5_06020 [Bacillus subtilis BSn5] gi|320018846|gb|ADV93832.1| hypothetical protein BSn5_06020 [Bacillus subtilis BSn5] Length = 248 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA-EGNLS 68 P+ +K++ +L+ + + L K+ E++ S S++ + + + Sbjct: 59 EPDTAAANAEKKYS--------ALNAEYKNLTKEHEELEKEYKSVSSEAKKLKDNKEDQD 110 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 ++ LKNE S LK+ L+ E E+ + K+ Sbjct: 111 KLEKLKNENSDLKKTQKSLKAEIKELQENQKQ 142 >gi|109081111|ref|XP_001114504.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 4 [Macaca mulatta] gi|109081113|ref|XP_001114516.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 5 [Macaca mulatta] Length = 1118 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|221310975|ref|ZP_03592822.1| hypothetical protein Bsubs1_16531 [Bacillus subtilis subsp. subtilis str. 168] gi|221315302|ref|ZP_03597107.1| hypothetical protein BsubsN3_16437 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320219|ref|ZP_03601513.1| hypothetical protein BsubsJ_16358 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324501|ref|ZP_03605795.1| hypothetical protein BsubsS_16507 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767697|ref|NP_390914.2| hypothetical protein BSU30360 [Bacillus subtilis subsp. subtilis str. 168] gi|226731831|sp|Q795Q5|YTTA_BACSU RecName: Full=Uncharacterized membrane protein yttA gi|2293303|gb|AAC00381.1| YttA [Bacillus subtilis] gi|225185325|emb|CAB15014.2| conserved hypothetical protein [Bacillus subtilis subsp. subtilis str. 168] Length = 248 Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA-EGNLS 68 P+ +K++ +L+ + + L K+ E++ S S++ + + + Sbjct: 59 EPDTAAANAEKKYS--------ALNAEYKNLTKEHEELEKEYKSVSSEAKKLKDNKEDQD 110 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 ++ LKNE S LK+ L+ E E+ + K+ Sbjct: 111 KLEKLKNENSDLKKTQKSLKAEIKELQENQKQ 142 >gi|291485473|dbj|BAI86548.1| hypothetical protein BSNT_04424 [Bacillus subtilis subsp. natto BEST195] Length = 248 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA-EGNLS 68 P+ +K++ +L+ + + L K+ E++ S S++ + + + Sbjct: 59 EPDTAAANAEKKYS--------ALNAEYKNLTKEHEELEKEYKSVSSEAKKLKDNKEDQD 110 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 ++ LKNE S LK+ L+ E E+ + K+ Sbjct: 111 KLEKLKNENSDLKKTQKSLKAEIKELQENQKQ 142 >gi|302653826|ref|XP_003018730.1| hypothetical protein TRV_07235 [Trichophyton verrucosum HKI 0517] gi|291182401|gb|EFE38085.1| hypothetical protein TRV_07235 [Trichophyton verrucosum HKI 0517] Length = 533 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 17/121 (14%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------------TDGRWLIPT 231 ++G+ EV P + + +G + DDM+ + L P Sbjct: 108 QYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVGGRGDTGETSDTSENEIYGLKPM 167 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 + L+ + + LP+R+ +P R+E + G+ R +F + + R Sbjct: 168 NCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSLS---GLTRVRRFHQDDGHIFCR 224 Query: 292 E 292 Sbjct: 225 P 225 >gi|302499120|ref|XP_003011556.1| hypothetical protein ARB_02109 [Arthroderma benhamiae CBS 112371] gi|291175108|gb|EFE30916.1| hypothetical protein ARB_02109 [Arthroderma benhamiae CBS 112371] Length = 533 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 17/121 (14%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT--------------TDGRWLIPT 231 ++G+ EV P + + +G + DDM+ + L P Sbjct: 108 QYKQYGFREVLTPNIYKQSLWEVSGHWQNYKDDMYEVGGRGDTGEASETSENEIYGLKPM 167 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 + L+ + + LP+R+ +P R+E + G+ R +F + + R Sbjct: 168 NCPGHCLLFKSQKHSYRELPVRYADFSPLHRNEVSGSLS---GLTRVRRFHQDDGHIFCR 224 Query: 292 E 292 Sbjct: 225 P 225 >gi|71895991|ref|NP_001025629.1| ezrin [Xenopus (Silurana) tropicalis] gi|60552277|gb|AAH91578.1| ezrin [Xenopus (Silurana) tropicalis] Length = 582 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 9/155 (5%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQ------IGQAIAEGN-LSL 69 +R L Q + L+E+ R + E + A R S + + I Q ++ S Sbjct: 361 AERELSEQIQRAKELEEERRRAQYEAERLEAERISALRAKEELERQAIAQTKSQEQLASE 420 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 + S L+E + E E E ++ + + E + T+ Sbjct: 421 LSEYTARISLLEEARRVKEDEASEWQMRAQEAQTDLLRTREELHMVMTTPPPPPPPVYEP 480 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 + EH L +DF K+ Sbjct: 481 YRVHEPDDGLEHTSYSAELSSVDFLEDNKMQTRMT 515 >gi|1141790|gb|AAB09051.1| nonmuscle myosin-II heavy chain [Drosophila melanogaster] Length = 1972 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1489 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1548 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1549 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1576 >gi|157953|gb|AAA28713.1| non-muscle myosin heavy chain [Drosophila melanogaster] Length = 1972 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1489 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1548 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1549 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1576 >gi|1572480|gb|AAB09048.1| nonmuscle myosin-II heavy chain [Drosophila melanogaster] Length = 2017 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1534 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1593 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1594 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1621 >gi|189201659|ref|XP_001937166.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187984265|gb|EDU49753.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1494 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 8/83 (9%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 D++ I ++ E +L+ + + + L+ L + + + A +N S Q Q I Sbjct: 656 DLRVIGEDYEREIESLR---ADLEGDATNRLN----KLQAEFDSLVAEKNELSKQHDQVI 708 Query: 63 AEGNLSLVDALKNETSTLKEQLP 85 AE + ++ALK E + L++ + Sbjct: 709 AE-RSAELEALKQELANLQDNIT 730 >gi|24762818|ref|NP_726506.1| zipper, isoform B [Drosophila melanogaster] gi|21645103|gb|AAM70805.1| zipper, isoform B [Drosophila melanogaster] Length = 2011 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1528 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1587 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1588 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1615 >gi|320544370|ref|NP_001189009.1| zipper, isoform F [Drosophila melanogaster] gi|318068695|gb|ADV37254.1| zipper, isoform F [Drosophila melanogaster] Length = 1979 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1496 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1555 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1556 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1583 >gi|298694847|gb|ADI98069.1| glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133] Length = 463 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 68/184 (36%), Gaps = 16/184 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + L L+++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASDWLTSLNMNSENMRLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNFQSRR------MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 E+ ++ +F R+ + RY DP + + + S A R +A L + Sbjct: 289 GELWGIASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGA-DRVTLAFLCDAY 347 Query: 402 NADG 405 + +G Sbjct: 348 DEEG 351 >gi|1572482|gb|AAB09050.1| nonmuscle myosin-II heavy chain [Drosophila melanogaster] Length = 2012 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1529 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1588 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1589 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1616 >gi|62471820|ref|NP_001014553.1| zipper, isoform C [Drosophila melanogaster] gi|320544368|ref|NP_001189008.1| zipper, isoform E [Drosophila melanogaster] gi|320544372|ref|NP_001189010.1| zipper, isoform G [Drosophila melanogaster] gi|61678343|gb|AAX52688.1| zipper, isoform C [Drosophila melanogaster] gi|318068694|gb|ADV37253.1| zipper, isoform E [Drosophila melanogaster] gi|318068696|gb|ADV37255.1| zipper, isoform G [Drosophila melanogaster] Length = 1971 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1488 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1547 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1548 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1575 >gi|24762816|ref|NP_523860.2| zipper, isoform A [Drosophila melanogaster] gi|7291892|gb|AAF47311.1| zipper, isoform A [Drosophila melanogaster] Length = 2056 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1573 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1632 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1633 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1660 >gi|62471805|ref|NP_001014552.1| zipper, isoform D [Drosophila melanogaster] gi|61678342|gb|AAX52687.1| zipper, isoform D [Drosophila melanogaster] Length = 2016 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1533 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1592 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1593 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1620 >gi|193444|gb|AAA37668.1| guanylate binding protein [Mus musculus] Length = 623 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 11/107 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQIGQAIAEGNL 67 + A +KR+ E +L++ R L ++ E + N + + EG Sbjct: 509 QEYMEAQEKRNKE-------NLEQLRRKLEQEREQLIKDHNMMLEKLTKEQKTFREEGYK 561 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + + L+ E L + +++ + S+ + + P E Sbjct: 562 TQAEELRREIHQLGHNIKEMKQNGDSLVESILRSWFSFISPPSESEK 608 >gi|51338816|sp|Q99323|MYSN_DROME RecName: Full=Myosin heavy chain, non-muscle; AltName: Full=Myosin II; AltName: Full=Non-muscle MHC; AltName: Full=Zipper protein gi|1572481|gb|AAB09049.1| nonmuscle myosin-II heavy chain [Drosophila melanogaster] Length = 2057 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1574 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1633 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1634 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1661 >gi|195489897|ref|XP_002092933.1| GE11388 [Drosophila yakuba] gi|194179034|gb|EDW92645.1| GE11388 [Drosophila yakuba] Length = 2011 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1528 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1587 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1588 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1615 >gi|194886932|ref|XP_001976713.1| GG19865 [Drosophila erecta] gi|190659900|gb|EDV57113.1| GG19865 [Drosophila erecta] Length = 2012 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1528 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1587 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1588 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1615 >gi|198456261|ref|XP_001360276.2| GA13959 [Drosophila pseudoobscura pseudoobscura] gi|198135550|gb|EAL24851.2| GA13959 [Drosophila pseudoobscura pseudoobscura] Length = 2014 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1526 RELDEAFDKIEDLENKRKTLQNELDDLANSQGTADKNVHELEKAKRALESQLAELKAQNE 1585 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1586 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1613 >gi|313673099|ref|YP_004051210.1| ATP-dependent chaperone clpb [Calditerrivibrio nitroreducens DSM 19672] gi|312939855|gb|ADR19047.1| ATP-dependent chaperone ClpB [Calditerrivibrio nitroreducens DSM 19672] Length = 866 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 6/73 (8%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A K +E S + L+ K R L + + ++ ++ S E Sbjct: 392 IDLVDEACAKLRMEIDSMPTELDELERKKRQLEIERQALKREQDEVSK----VKLEKIEK 447 Query: 69 LVDALKNETSTLK 81 ++ L + LK Sbjct: 448 EINDLSEKIIALK 460 >gi|114657014|ref|XP_001168710.1| PREDICTED: ubiquitin specific protease 8 isoform 4 [Pan troglodytes] gi|114657016|ref|XP_001168761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 6 [Pan troglodytes] gi|114657018|ref|XP_001168786.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 7 [Pan troglodytes] gi|114657020|ref|XP_001168812.1| PREDICTED: ubiquitin specific protease 8 isoform 8 [Pan troglodytes] gi|114657022|ref|XP_001168860.1| PREDICTED: ubiquitin specific protease 8 isoform 9 [Pan troglodytes] gi|332843784|ref|XP_001168674.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pan troglodytes] Length = 1118 Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|114657024|ref|XP_510827.2| PREDICTED: ubiquitin specific protease 8 isoform 10 [Pan troglodytes] Length = 1089 Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|332235543|ref|XP_003266963.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Nomascus leucogenys] gi|332235545|ref|XP_003266964.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Nomascus leucogenys] gi|332235547|ref|XP_003266965.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3 [Nomascus leucogenys] Length = 1117 Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVDYV 256 >gi|328697842|ref|XP_001942978.2| PREDICTED: moesin/ezrin/radixin homolog 1-like [Acyrthosiphon pisum] Length = 572 Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 50/152 (32%), Gaps = 4/152 (2%) Query: 9 QNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 + + + + KR + S + I L+E+ L E++ R+N + + N Sbjct: 344 ERLKVMQAEISKREQDLLSAQDMIRRLEEQLNKLQLAKEELEQRQNELQKMMERLEESKN 403 Query: 67 LSLVDALK--NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + V+ K E +E++ ++ E K+L + ++ +A Sbjct: 404 MEAVERAKLEEEIKAKQEEVMRIQSEVETKDEETKRLQEEVEEARRKQEEAAAAALAAAA 463 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRA 156 + + G +D D Sbjct: 464 TPKHHHVTENENEDNDEMVNGHETQDLDTDMD 495 >gi|288819055|ref|YP_003433403.1| hypothetical protein HTH_1758 [Hydrogenobacter thermophilus TK-6] gi|288788455|dbj|BAI70202.1| hypothetical protein HTH_1758 [Hydrogenobacter thermophilus TK-6] gi|308752638|gb|ADO46121.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6] Length = 452 Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 9/65 (13%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +P E I L+E+ R+L ++++ ++ + +E + LK E L+ Sbjct: 16 FAQPAEERIKQLEEQIRLLQQEVQKLKEEQK---------KSEETRQETEVLKEEIRKLR 66 Query: 82 EQLPI 86 ++ + Sbjct: 67 LEIAM 71 >gi|289450135|ref|YP_003475729.1| glycine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184682|gb|ADC91107.1| glycine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 462 Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 17/160 (10%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 175 TAQGIFVNFRNVQRTSRKKLPFGICQVGKSFRNEI----TPGNFTFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRL---DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + LK L + R+ +L F + T D+E + Sbjct: 231 NPDTDLDWFHYWKDFCYNWLKTLGIAETELRLRDHRPEELSFYSKATTDIEFLFPF--GW 288 Query: 348 REISSCSTCGNF------QSRRMNSRYRDP--NSKSLKFT 379 E+ + N+ ++ R + Y DP N K + + Sbjct: 289 GELWGIADRTNYDLGRHMEASRQDLTYFDPETNEKYIPYV 328 >gi|195149489|ref|XP_002015690.1| GL10886 [Drosophila persimilis] gi|194109537|gb|EDW31580.1| GL10886 [Drosophila persimilis] Length = 2045 Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1557 RELDEAFDKIEDLENKRKTLQNELDDLANSQGTADKNVHELEKAKRALESQLAELKAQNE 1616 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1617 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1644 >gi|290769989|gb|ADD61756.1| putative protein [uncultured organism] Length = 462 Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 13/190 (6%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 + + F+ + + + + + + M+ T Q +D T T+ Sbjct: 121 WTQEQMKNFIDEKNICCPSCGKHNFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPETA 176 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + + K +P + SFR+E R +F + EL + Sbjct: 177 QGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKP 232 Query: 293 EDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + LK L + R +L F + T D+E + E Sbjct: 233 GTDLEWFTYWRQYCIDWLKALGMKEDEMRARDHSPEELCFYSKGTTDIEFLFPF--GWGE 290 Query: 350 ISSCSTCGNF 359 + + ++ Sbjct: 291 LWGIADRTDY 300 >gi|225550529|ref|ZP_03771478.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379683|gb|EEH02045.1| threonine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 580 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 7/174 (4%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL- 236 Q I+ + + V P+L + +G + D++F ++ ++ Sbjct: 214 VQKFINEVEFQFNFDTVITPILGSIDLYKTSGHWDHYKDNIFSPVQIDNEVLILRPMTCP 273 Query: 237 --TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 T +YS+E+ +SLP+R + + R E+ G R + + R + Sbjct: 274 HHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLT---GFERVREMILEDCHVFCRPDQ 330 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 E +E + L + + L D D ++W QN R Sbjct: 331 IEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPNDKEKYYDDPQMWEHSQNALR 384 >gi|119610750|gb|EAW90344.1| rabaptin, RAB GTPase binding effector protein 1, isoform CRA_b [Homo sapiens] Length = 711 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 52/153 (33%), Gaps = 3/153 (1%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEV-CSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + + E S +KE LE E+ + + L+E + + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEERQ 264 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + F + L + D R + Sbjct: 265 QHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 297 >gi|171920625|ref|ZP_02695822.2| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188524282|ref|ZP_03004325.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867906|ref|ZP_03079904.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273446|ref|ZP_03205982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554092|ref|YP_002284982.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|238065120|sp|B5ZC42|SYT_UREU1 RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|171903344|gb|EDT49633.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195660016|gb|EDX53396.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660383|gb|EDX53642.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249966|gb|EDY74746.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541593|gb|ACI59822.1| threonyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 580 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 7/174 (4%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSL- 236 Q I+ + + V P+L + +G + D++F ++ ++ Sbjct: 214 VQKFINEVEFQFNFDTVITPILGSIDLYKTSGHWDHYKDNIFSPVQIDNEVLILRPMTCP 273 Query: 237 --TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 T +YS+E+ +SLP+R + + R E+ G R + + R + Sbjct: 274 HHTLVYSNELRSYRSLPIRLSEHSILHRYESSGGLT---GFERVREMILEDCHVFCRPDQ 330 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 E +E + L + + L D D ++W QN R Sbjct: 331 IEHEVINAFKMIQEAQEGLGIKTFEIHLSLNDPNDKEKYYDDPQMWEHSQNALR 384 >gi|325090828|gb|EGC44138.1| threonyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 578 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 66/206 (32%), Gaps = 28/206 (13%) Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL-----GQFMIDLH 186 P S+ H ++ ++ ++ G L + Sbjct: 75 PHHDTYSQTHTLPPADHRVVGTEQELFVTSQ---YSPGSPLFLPNGTHILNKLTSFLRAQ 131 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----------------DGRWLI 229 +++G+ EV P + + +G + DDM+ + L Sbjct: 132 YTKYGFLEVLTPSIYKKSLWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLK 191 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 P + L+ + + LPLR+ +P R+E + G+ R +F + + Sbjct: 192 PMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLS---GLTRVRRFHQDDGHIF 248 Query: 290 TREEDSFTEHERMLSCAEEILKRLDL 315 R + +E E L + +++ Sbjct: 249 CRPQQIGSEIESALKFTDTVMRTFGF 274 >gi|320544374|ref|NP_001189011.1| zipper, isoform H [Drosophila melanogaster] gi|318068697|gb|ADV37256.1| zipper, isoform H [Drosophila melanogaster] Length = 1964 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1496 RELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1555 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1556 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1583 >gi|153815621|ref|ZP_01968289.1| hypothetical protein RUMTOR_01857 [Ruminococcus torques ATCC 27756] gi|317502155|ref|ZP_07960332.1| glycine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|331090328|ref|ZP_08339212.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] gi|145847052|gb|EDK23970.1| hypothetical protein RUMTOR_01857 [Ruminococcus torques ATCC 27756] gi|316896442|gb|EFV18536.1| glycine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|330401463|gb|EGG81048.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] Length = 466 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 176 TAQGIFVNFKNVQRTSRKKLPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 231 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + + L L L V D L F + T D+E + Sbjct: 232 KPDTDLEWFDYWKNFCLNWLSELGLKEDEVRYRDHDAEELSFYSKATTDVEFLFPF--GW 289 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 290 GELWGIADRTDY 301 >gi|229007232|ref|ZP_04164833.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228753986|gb|EEM03423.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock1-4] Length = 455 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 169 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 224 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + + L L +H + L +L + T D+E + Sbjct: 225 KPGEDLEWFTFWRNTCKNWLLSLGMHEESMRLRDHGEDELSHYSNATTDIEFKFPF--GW 282 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 283 GELWGVASRTDFDLKR 298 >gi|290994751|ref|XP_002679995.1| predicted protein [Naegleria gruberi] gi|284093614|gb|EFC47251.1| predicted protein [Naegleria gruberi] Length = 528 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 69/207 (33%), Gaps = 22/207 (10%) Query: 202 RDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 + ++ T P ++ T++ N + K LPL + +F Sbjct: 207 NFDMLFKTMYGPIEKEE----NTAYLRPETAQGIFINFNNVITTSRKRLPLGVGQIGKAF 262 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH--YRV 319 R+E + RQ +F + EL S + ++ E L + L Sbjct: 263 RNEIS----PRDFIFRQREFEQMELEYFCHPTQSSDYFKYWVNFCHEWLLKYGLKKDNVR 318 Query: 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF--QSR-------RMNSRYRD 370 + T DL + +T D+E + EI + ++ Q+ + Y D Sbjct: 319 IYTKTQDLAHYSKETSDIEYLFPF--GWSEIWGIANRTDYDLQAHVQPSKKDKHTFEYVD 376 Query: 371 PNSKSLKFTHTLNGSGVAVGRCLIAIL 397 P + H + S A R L A L Sbjct: 377 PQTNEKYVPHVVEPSAGA-DRVLFAFL 402 >gi|228999674|ref|ZP_04159250.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228760036|gb|EEM09006.1| Glycyl-tRNA synthetase [Bacillus mycoides Rock3-17] Length = 458 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + + L L +H + L +L + T D+E + Sbjct: 228 KPGEDLEWFTFWRNTCKNWLLSLGMHEESMRLRDHGEDELSHYSNATTDIEFKFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|261367209|ref|ZP_05980092.1| glycine--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282570808|gb|EFB76343.1| glycine--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 473 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 53/151 (35%), Gaps = 12/151 (7%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + + LP + +FR+E R +F + E Sbjct: 175 TAQGIFVNFANIQRTTRRKLPFGVCQVGKAFRNEI----TPGNFTFRTREFEQMECEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + L L + + L +L F + T D+E + + Sbjct: 231 KPNTDLEWFAYWKDFCKNWLLSLGIKEENLRLRDHEAAELAFYSRATTDIEYAFPFTD-W 289 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 E+ + N+ SR+++ + KSL++ Sbjct: 290 GELWGIADRTNYD----LSRHQEASGKSLEY 316 >gi|195124863|ref|XP_002006903.1| GI18341 [Drosophila mojavensis] gi|193911971|gb|EDW10838.1| GI18341 [Drosophila mojavensis] Length = 1710 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 13/102 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1234 LDPEMERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIREL 1283 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 Q E +LV+ + S + E+L ++ E K+ Sbjct: 1284 EQLQNEKRKALVEHEHAKLSEIDERLKAELRDWREQLVPRKQ 1325 >gi|159884175|gb|ABX00766.1| LP09626p [Drosophila melanogaster] Length = 1043 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 13/137 (9%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 903 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 952 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 Q E +LV+ ++ S + E+L +E E K+ + L+E+ Sbjct: 953 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQRLEETFAQQLDEMETLYG 1012 Query: 119 ANENILIRSVGKKPSAI 135 + + S + Sbjct: 1013 GALIVSMPSDTLQRDHF 1029 >gi|116283812|gb|AAH32435.1| RABEP1 protein [Homo sapiens] Length = 716 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 52/153 (33%), Gaps = 3/153 (1%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEV-CSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + + E S +KE LE E+ + + L+E + + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEERQ 264 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + F + L + D R + Sbjct: 265 QHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 297 >gi|302835365|ref|XP_002949244.1| hypothetical protein VOLCADRAFT_89493 [Volvox carteri f. nagariensis] gi|300265546|gb|EFJ49737.1| hypothetical protein VOLCADRAFT_89493 [Volvox carteri f. nagariensis] Length = 627 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 41/93 (44%), Gaps = 11/93 (11%) Query: 15 DIALKKRHLEPQS------EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 AL+ R+ E + E I L E+ ++ K++ + A R +++++ A Sbjct: 537 IEALRSRNAEVELKCRQQAEQIKELKEEKTVVEKRLASLEAERKRDASELAAAHR----- 591 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 ++ LK + E++ + + ++ + +K Sbjct: 592 EIEKLKADLKDRDEKIKARDMMKDKLEALMKSW 624 >gi|148688258|gb|EDL20205.1| mCG20328, isoform CRA_c [Mus musculus] Length = 607 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 14/112 (12%) Query: 6 WIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQI 58 +R + + A +KR+ E ++++ R L ++ E + N + Sbjct: 500 LLRQKQKEQQEYMEAQEKRNKE-------NIEQLRRKLEQEREQLIKDHNMMVEKKLKEQ 552 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + EG + + E LK + ++K++ K I Sbjct: 553 KALLEEGFKKKAEEMDGEIQQLKHNIEDMKKKQWFHFRYYYKRSCFIYFFSH 604 >gi|114657026|ref|XP_001168731.1| PREDICTED: ubiquitin specific protease 8 isoform 5 [Pan troglodytes] Length = 1047 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 7/167 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ + E L +LK R+ E + L+EK+R ++ + ++ +R + G + Sbjct: 94 NIKKAVEEAERLSESLKLRYEEAEVRK--KLEEKDR--QEEAQRLQQKRQETGREDGGTL 149 Query: 63 AEGNLSLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSA 119 A+G+L V K++T + E+ E +E ++ + + Sbjct: 150 AKGSLENVLDSKDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQD 209 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I P EA D K G V Sbjct: 210 YQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 256 >gi|114559275|ref|XP_001168898.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 7 [Pan troglodytes] Length = 636 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 25/183 (13%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--------------------CTTDGRWL 228 G++EV P L + +G + +DMF TD L Sbjct: 263 HRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLAL 322 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 P + + +++H + LPLR R+EA G+ R F + + Sbjct: 323 KPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGL---GGLTRLRCFQQDDAHI 379 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYR--VVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + E + L + L +R + + +G LG +V Sbjct: 380 FCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRPSGFLGDPCLWDQAEQVLKQALKE 439 Query: 347 YRE 349 + E Sbjct: 440 FGE 442 >gi|114559285|ref|XP_001168667.1| PREDICTED: threonyl-tRNA synthetase-like 1 isoform 1 [Pan troglodytes] gi|55958998|emb|CAI15490.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] Length = 443 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 25/183 (13%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--------------------CTTDGRWL 228 G++EV P L + +G + +DMF TD L Sbjct: 70 HRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLAL 129 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 P + + +++H + LPLR R+EA G+ R F + + Sbjct: 130 KPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGL---GGLTRLRCFQQDDAHI 186 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYR--VVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + E + L + L +R + + +G LG +V Sbjct: 187 FCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRPSGFLGDPCLWDQAEQVLKQALKE 246 Query: 347 YRE 349 + E Sbjct: 247 FGE 249 >gi|38537103|gb|AAR23527.1| threonyl-tRNA synthetase [Homo sapiens] Length = 443 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 25/183 (13%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--------------------CTTDGRWL 228 G++EV P L + +G + +DMF TD L Sbjct: 70 HRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLAL 129 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 P + + +++H + LPLR R+EA G+ R F + + Sbjct: 130 KPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGL---GGLTRLRCFQQDDAHI 186 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYR--VVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + E + L + L +R + + +G LG +V Sbjct: 187 FCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRPSGFLGDPCLWDQAEQVLKQALKE 246 Query: 347 YRE 349 + E Sbjct: 247 FGE 249 >gi|114559281|ref|XP_001168852.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 5 [Pan troglodytes] gi|10434068|dbj|BAB14117.1| unnamed protein product [Homo sapiens] gi|55958997|emb|CAI15489.1| threonyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens] gi|119573934|gb|EAW53549.1| threonyl-tRNA synthetase-like 1, isoform CRA_b [Homo sapiens] Length = 588 Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 25/183 (13%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--------------------CTTDGRWL 228 G++EV P L + +G + +DMF TD L Sbjct: 215 HRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLAL 274 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 P + + +++H + LPLR R+EA G+ R F + + Sbjct: 275 KPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGL---GGLTRLRCFQQDDAHI 331 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYR--VVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + E + L + L +R + + +G LG +V Sbjct: 332 FCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRPSGFLGDPCLWDQAEQVLKQALKE 391 Query: 347 YRE 349 + E Sbjct: 392 FGE 394 >gi|229814961|ref|ZP_04445299.1| hypothetical protein COLINT_02004 [Collinsella intestinalis DSM 13280] gi|229809448|gb|EEP45212.1| hypothetical protein COLINT_02004 [Collinsella intestinalis DSM 13280] Length = 468 Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 44/93 (47%), Gaps = 6/93 (6%) Query: 20 KRHLEPQSEYILSLDEKNRI-LIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 +R++E + I+ + + + ED++A+R++ + ++ Q + ++ ++ E + Sbjct: 139 RRNIEANYDEIIERERARKSDAEQAAEDLKAQRDATADRVSQLKRK-----LEQMREEDT 193 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 T +++L + + S ++ + N + Sbjct: 194 TTEKRLKVTLDAATDKEQSARESGRRLQNRLDD 226 >gi|83776551|ref|NP_083785.3| guanylate binding protein 8 [Mus musculus] gi|82791932|gb|ABB90898.1| guanylate binding protein 8 [Mus musculus] Length = 525 Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 14/112 (12%) Query: 6 WIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQI 58 +R + + A +KR+ E ++++ R L ++ E + N + Sbjct: 418 LLRQKQKEQQEYMEAQEKRNKE-------NIEQLRRKLEQEREQLIKDHNMMVEKKLKEQ 470 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + EG + + E LK + ++K++ K I Sbjct: 471 KALLEEGFKKKAEEMDGEIQQLKHNIEDMKKKQWFHFRYYYKRSCFIYFFSH 522 >gi|45384236|ref|NP_990388.1| rab GTPase-binding effector protein 1 [Gallus gallus] gi|2329853|dbj|BAA21785.1| rabaptin-5 [Gallus gallus] Length = 860 Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+N E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RENVEREIAELRRRLSEAQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKEKLIE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEEKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|228993636|ref|ZP_04153543.1| Glycyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|228766065|gb|EEM14712.1| Glycyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 458 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + + L L +H + L +L + T D+E + Sbjct: 228 KPGEDLEWFTFWRNTCKNWLLSLGMHEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|225548175|ref|ZP_03769460.1| hypothetical protein RUMHYD_00154 [Blautia hydrogenotrophica DSM 10507] gi|225040614|gb|EEG50860.1| hypothetical protein RUMHYD_00154 [Blautia hydrogenotrophica DSM 10507] Length = 464 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 59/191 (30%), Gaps = 13/191 (6%) Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT 231 A + + F+ + + + + + + M+ T Q +D T T Sbjct: 120 AWSQEQMMDFIKEHNVPCPTCGKHNFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPET 175 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ N + + K LP + SFR+E R +F + EL Sbjct: 176 AQGIFVNFKNVQRTSRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCE 231 Query: 292 EEDSFTEHERMLSCAEEILKRL---DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + + L L + R +L F + T D+E + Sbjct: 232 PDTDLEWFAYWKKFCLDWLSSLGLKEDEVRYRDHEKEELSFYSKATTDVEFLFPF--GWG 289 Query: 349 EISSCSTCGNF 359 E+ + ++ Sbjct: 290 ELWGIADRTDY 300 >gi|158520035|ref|YP_001527905.1| hypothetical protein Dole_0018 [Desulfococcus oleovorans Hxd3] gi|254799454|sp|A8ZRR1|Y018_DESOH RecName: Full=UPF0365 protein Dole_0018 gi|158508861|gb|ABW65828.1| protein of unknown function DUF1432 [Desulfococcus oleovorans Hxd3] Length = 326 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 43/97 (44%), Gaps = 12/97 (12%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKN----RILIKKIEDIRARRNSNSAQIG 59 + + +NP+ + + ++ L+ + ILS+D + + + ++E RA +I Sbjct: 189 KHVLENPDLISKRVLEKGLDSGTAFEILSIDIADVDVGKNIGAELETDRAE---ADKKIA 245 Query: 60 QAIAEGNLSLV----DALKNETSTLKEQLPILEKEEH 92 QA AE ++ +K + ++ ++ E + Sbjct: 246 QAKAEERRAMAYAREQEMKAQVEEMRAKVVEAEAKIP 282 >gi|159481478|ref|XP_001698806.1| ClpB chaperone, Hsp100 family [Chlamydomonas reinhardtii] gi|158273517|gb|EDO99306.1| ClpB chaperone, Hsp100 family [Chlamydomonas reinhardtii] Length = 925 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A ++ S E + +L+ + + L + + +++ S + + + + Sbjct: 396 IDLVDEACANMRVQLDSKPEQLDALERQRQRLQVEAAALAKEKDALSKARAKEVGKELAA 455 Query: 69 LVDALKNETSTLKEQLPILEK 89 L +AL+ ++ LE+ Sbjct: 456 LEEALRPLQMKYAQEKARLEE 476 >gi|114665928|ref|XP_001165273.1| PREDICTED: rabaptin, RAB GTPase binding effector protein 1 isoform 5 [Pan troglodytes] Length = 855 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 52/153 (33%), Gaps = 3/153 (1%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEV-CSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + + E S +KE LE E+ + + L+E + + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEERQ 264 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + F + L + D R + Sbjct: 265 QHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 297 >gi|254692867|ref|NP_001157089.1| threonyl-tRNA synthetase, mitochondrial isoform 2 [Mus musculus] gi|14290460|gb|AAH08995.1| Tars2 protein [Mus musculus] Length = 697 Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 57/190 (30%), Gaps = 26/190 (13%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + AL F+ + G++EV P L + +G + DMF Sbjct: 323 SPGSCFFLPRGTRVYNALVAFIRAEYA-RRGFSEVKTPTLFSTKLWEQSGHWEHYRADMF 381 Query: 221 --------------------CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS 260 C D L P + + +++H + LP+R Sbjct: 382 SLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLADFGAL 441 Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILK--RLDLHYR 318 R+EA + G+ R +F + + E + L + H Sbjct: 442 HRAEASGSL---GGLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFLRCVYSVLGFSFHLA 498 Query: 319 VVSLCTGDLG 328 + + G LG Sbjct: 499 LSTRPPGFLG 508 >gi|194756334|ref|XP_001960434.1| GF11513 [Drosophila ananassae] gi|190621732|gb|EDV37256.1| GF11513 [Drosophila ananassae] Length = 2013 Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1528 RELDEAYDKIEDLENKRKQLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1587 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1588 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1615 >gi|73960799|ref|XP_863624.1| PREDICTED: similar to CDC42-binding protein kinase alpha isoform B isoform 7 [Canis familiaris] Length = 1781 Score = 42.1 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 45/116 (38%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E+L ++ +R L+ I + +++ R L ++ E+ Sbjct: 487 LEIKTLKEEIENLRKQIRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIRTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|258423993|ref|ZP_05686875.1| glycyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257845614|gb|EEV69646.1| glycyl-tRNA synthetase [Staphylococcus aureus A9635] Length = 463 Score = 42.1 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 16/184 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + L L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASDWLTSLNMSSDNMRLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNFQSRR------MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 E+ ++ +F R+ + RY DP + + + S A R +A L + Sbjct: 289 GELWGIASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGA-DRVTLAFLCDAY 347 Query: 402 NADG 405 + +G Sbjct: 348 DEEG 351 >gi|89100461|ref|ZP_01173323.1| hypothetical protein B14911_05506 [Bacillus sp. NRRL B-14911] gi|89084804|gb|EAR63943.1| hypothetical protein B14911_05506 [Bacillus sp. NRRL B-14911] Length = 332 Score = 42.1 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 41/98 (41%), Gaps = 18/98 (18%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + + L+ + ILS+D I ++ +++ + Sbjct: 192 KKVLENPDMISQTVLSKGLDAGTAFEILSID------IADVDIGKNIGAELQTEQAEADK 245 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 +I QA AE ++ +K + ++ ++ E + Sbjct: 246 KIAQAKAEERRAMAVAQEQEMKAKVEEMRAKVVEAEAK 283 >gi|329314241|gb|AEB88654.1| Glycyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] Length = 463 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 16/184 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + L L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASDWLTNLNMSSENMRLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNFQSRR------MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 E+ ++ +F R+ + RY DP + + + S A R +A L + Sbjct: 289 GELWGIASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGA-DRVTLAFLCDAY 347 Query: 402 NADG 405 + +G Sbjct: 348 DEEG 351 >gi|238917275|ref|YP_002930792.1| glycyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750] gi|259511934|sp|C4Z1I4|SYG_EUBE2 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|238872635|gb|ACR72345.1| glycyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750] Length = 462 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 13/190 (6%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 + + F+ + + + + + + M+ T Q +D T T+ Sbjct: 121 WTQEQMKNFIDEKNICCPSCGKHNFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPETA 176 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + + K +P + SFR+E R +F + EL + Sbjct: 177 QGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKP 232 Query: 293 EDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + LK L + R +L F + T D+E + E Sbjct: 233 GTDLEWFTYWRQYCIDWLKALGIKEDEMRARDHSPEELCFYSKGTTDIEFLFPF--GWGE 290 Query: 350 ISSCSTCGNF 359 + + ++ Sbjct: 291 LWGIADRTDY 300 >gi|332220155|ref|XP_003259223.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial isoform 2 [Nomascus leucogenys] Length = 588 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 25/183 (13%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF--------------------CTTDGRWL 228 G++EV P L + +G + +DMF TD L Sbjct: 215 RRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLAL 274 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 P + + +++H + LPLR R+EA + R G+ R F + + Sbjct: 275 KPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGSLR---GLTRLRCFQQDDAHI 331 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYR--VVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + E + L + L +R + + +G LG +V Sbjct: 332 FCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRPSGFLGDPCLWDQAEQVLKQALKE 391 Query: 347 YRE 349 + E Sbjct: 392 FGE 394 >gi|256079696|ref|XP_002576121.1| Rootletin (Ciliary rootlet coiled-coil protein) [Schistosoma mansoni] gi|238661382|emb|CAZ32356.1| Rootletin (Ciliary rootlet coiled-coil protein), putative [Schistosoma mansoni] Length = 2013 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 9/100 (9%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRIL---IKKIEDIRARRNSNSAQIGQAIAE 64 R N E L KR ++E + E+NR+L ++I ++ ++S +IG+ + Sbjct: 1123 RDNQEEAKENLVKRVQSLETERV----EQNRVLTDQQQQISAFEEQKCADSKEIGELRSS 1178 Query: 65 GNLSLVDAL--KNETSTLKEQLPILEKEEHEVCSSLKKLI 102 S L + + ++ QL ++ E L ++ Sbjct: 1179 VRESEKGRLDVRRDLQEVRRQLKDMQSEHERQTKELMEMQ 1218 >gi|154282499|ref|XP_001542045.1| hypothetical protein HCAG_02216 [Ajellomyces capsulatus NAm1] gi|150410225|gb|EDN05613.1| hypothetical protein HCAG_02216 [Ajellomyces capsulatus NAm1] Length = 582 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 65/206 (31%), Gaps = 28/206 (13%) Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL-----GQFMIDLH 186 P S H ++ ++ ++ G L + Sbjct: 79 PHHGTYSHTHTLPPADHRVVGTEQELFVTSQ---YSPGSPLFLPNGTHILNKLTSFLRAQ 135 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----------------DGRWLI 229 +++G+ EV P + + +G + DDM+ + L Sbjct: 136 YTQYGFLEVLTPSIYKKSLWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLK 195 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 P + L+ + + LPLR+ +P R+E + G+ R +F + + Sbjct: 196 PMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLS---GLTRVRRFHQDDGHIF 252 Query: 290 TREEDSFTEHERMLSCAEEILKRLDL 315 R + +E E L + +++ Sbjct: 253 CRPQQIGSEIESALKFTDTVMRTFGF 278 >gi|83645496|ref|YP_433931.1| hypothetical protein HCH_02721 [Hahella chejuensis KCTC 2396] gi|83633539|gb|ABC29506.1| conserved hypothetical protein [Hahella chejuensis KCTC 2396] Length = 457 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 2/66 (3%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 L + + ++AR+ S IG+A G S + L E + + + + + Sbjct: 9 SLKSREDQLKARKGELSRLIGEAKKNG--SDANELIVEMGAISAEFKEVAAHIKTLKKAQ 66 Query: 99 KKLISC 104 ++ Sbjct: 67 RQQGDW 72 >gi|73960797|ref|XP_863599.1| PREDICTED: similar to CDC42-binding protein kinase alpha isoform B isoform 6 [Canis familiaris] Length = 1728 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 45/116 (38%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E+L ++ +R L+ I + +++ R L ++ E+ Sbjct: 487 LEIKTLKEEIENLRKQIRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIRTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|195121678|ref|XP_002005347.1| GI19126 [Drosophila mojavensis] gi|193910415|gb|EDW09282.1| GI19126 [Drosophila mojavensis] Length = 2047 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1561 RELDEAYDKIEDLETKRKQLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1620 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1621 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1648 >gi|2696219|dbj|BAA23805.1| neurocrescin [Gallus gallus] Length = 782 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+N E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 69 RENVEREIAELRRRLSEAQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKEKLIE 126 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 127 AEEKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 186 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 187 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 226 >gi|73960807|ref|XP_851425.1| PREDICTED: similar to CDC42-binding protein kinase alpha isoform B isoform 2 [Canis familiaris] Length = 1732 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 45/116 (38%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E+L ++ +R L+ I + +++ R L ++ E+ Sbjct: 487 LEIKTLKEEIENLRKQIRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIRTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|73960791|ref|XP_863529.1| PREDICTED: similar to CDC42-binding protein kinase alpha isoform B isoform 3 [Canis familiaris] Length = 1654 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 45/116 (38%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E+L ++ +R L+ I + +++ R L ++ E+ Sbjct: 387 LEIKTLKEEIENLRKQIRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIRTLQQEREE 446 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 447 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 502 >gi|73960805|ref|XP_537229.2| PREDICTED: similar to CDC42-binding protein kinase alpha isoform B isoform 1 [Canis familiaris] Length = 1754 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 45/116 (38%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E+L ++ +R L+ I + +++ R L ++ E+ Sbjct: 487 LEIKTLKEEIENLRKQIRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIRTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|71032733|ref|XP_766008.1| hypothetical protein [Theileria parva strain Muguga] gi|68352965|gb|EAN33725.1| hypothetical protein, conserved [Theileria parva] Length = 576 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 33/75 (44%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 SL + LI++ ++++ +N+ +I Q A L + + + + + QL ++ E Sbjct: 86 SLKSQRENLIREADELQKEKNAFVQKIKQERAIEAEKLAEDRRRQNAEIASQLKQIQIER 145 Query: 92 HEVCSSLKKLISCIP 106 + ++ + Sbjct: 146 EDSRRRIEDDWCKLE 160 >gi|70991877|ref|XP_750787.1| conserved hypothetical protein [Aspergillus fumigatus Af293] gi|66848420|gb|EAL88749.1| conserved hypothetical protein [Aspergillus fumigatus Af293] gi|159124349|gb|EDP49467.1| conserved hypothetical protein [Aspergillus fumigatus A1163] Length = 267 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 30/61 (49%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 R LE + + + L+E+ R L K E++R +R +++I QA + + +ET Sbjct: 182 AARFLEDEFDEMEQLEERIRRLKHKREELRRKRAKEASEIPQAEGSSGKTQGEQQIDETR 241 Query: 79 T 79 Sbjct: 242 Q 242 >gi|257054878|ref|YP_003132710.1| DNA topoisomerase IV subunit A [Saccharomonospora viridis DSM 43017] gi|256584750|gb|ACU95883.1| DNA topoisomerase IV subunit A [Saccharomonospora viridis DSM 43017] Length = 827 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 5/79 (6%) Query: 4 IQWIR--QNPEHLDIALKKRHLEPQSEYILSLDE-KNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N + L KR + + LD R+ ++ + ++ +I + Sbjct: 410 IKLIRGSENAQAAKEGLMKRFKLSEVQAAYILDTPLRRLTKYDKLELESEQDRLRKEIAE 469 Query: 61 AIAEGNLSLVDALKNETST 79 + V LK S Sbjct: 470 LTEILDDEKV--LKRVVSK 486 >gi|195426702|ref|XP_002061441.1| GK20720 [Drosophila willistoni] gi|194157526|gb|EDW72427.1| GK20720 [Drosophila willistoni] Length = 2015 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1531 RELDEAYDKIEDLENKRKQLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1590 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1591 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1618 >gi|23380420|gb|AAN17924.1| Erp27 protein [Borrelia burgdorferi N40] Length = 255 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 IQWIRQNPEHLDIALKKRH-LEPQSEYILSLDEKNRILIKK-IEDIRARRNSNSAQIGQA 61 I+ IR+ E + L+ + E + E + K + KK +E ++ + N QIG A Sbjct: 128 IKKIRKQLEDIGDKLEDKGKFEIKLEELEDSLTKKKETRKKALEKVKEKLNEFKEQIGSA 187 Query: 62 IAEGNLSLVDA 72 + + V Sbjct: 188 SGQSDAEKVKE 198 >gi|73960803|ref|XP_863666.1| PREDICTED: similar to CDC42-binding protein kinase alpha isoform B isoform 9 [Canis familiaris] Length = 1719 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 45/116 (38%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E+L ++ +R L+ I + +++ R L ++ E+ Sbjct: 487 LEIKTLKEEIENLRKQIRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIRTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|294673346|ref|YP_003573962.1| threonine--tRNA ligase [Prevotella ruminicola 23] gi|294474289|gb|ADE83678.1| threonine--tRNA ligase [Prevotella ruminicola 23] Length = 648 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 37/138 (26%), Gaps = 9/138 (6%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKF-ADDMFCTTDGRWLIPTSEVSLTNLYS-----H 242 GY EV P + +G + D + + Sbjct: 290 RFGYQEVITPHIGSKNLYVTSGHYAHYGKDSFQPIHTPEEDEEYMLKPMNCPHHCEIFAW 349 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 + + LPLR +R E + G+ R F + + R + E + Sbjct: 350 KPRSYRDLPLRIAEFGTVYRYEQSG---ELHGLTRVRSFTQDDAHLFCRPDQVKQEFLNV 406 Query: 303 LSCAEEILKRLDLHYRVV 320 + +L ++ Sbjct: 407 MDIIGIVLTAFGFNFEAQ 424 >gi|226323777|ref|ZP_03799295.1| hypothetical protein COPCOM_01552 [Coprococcus comes ATCC 27758] gi|225207961|gb|EEG90315.1| hypothetical protein COPCOM_01552 [Coprococcus comes ATCC 27758] Length = 491 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 204 TAQGIFVNFKNVQRTSRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 259 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + L L L V D L F + T D+E + Sbjct: 260 KPDTDLEWFAYWKKFCLDWLFSLGLKDEEVRYRDHDKEELSFYSKATTDVEFLFPF--GW 317 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 318 GELWGIADRTDY 329 >gi|219851588|ref|YP_002466020.1| prolyl-tRNA synthetase [Methanosphaerula palustris E1-9c] gi|219545847|gb|ACL16297.1| prolyl-tRNA synthetase [Methanosphaerula palustris E1-9c] Length = 479 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 97/286 (33%), Gaps = 23/286 (8%) Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 P S + ++ +MD K V + + + L +H Sbjct: 11 PPKEEFSAWYNDLLWRAEIMDVRYPVK----GVYVWFPFGFSIRKLTYAILRQLLDKDHQ 66 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD--------GRWLIPTSEVSLTNLYSHE 243 + L+ E M I F ++++ T L PTSE ++ +Y+ Sbjct: 67 -ETLFPLLIPEQEFMKEAEHIKGFEEEVYWVTHGGLTELDVKLALRPTSETAIYPMYALW 125 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHER 301 + LPL+ + +FR E + TR ++R + + +++ + E Sbjct: 126 VRSHADLPLKLYQIVNTFRYE----TKHTRPLIRLREITSFKEAHTVHATWDEAAAQVED 181 Query: 302 MLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS 361 L+ + L + + D A T ++ + +I + G+ S Sbjct: 182 ALALYTTFYQHLCVPILISRRPEWDKFPGADYTMAVDTVMP-DGKTLQIGTVHHLGDHFS 240 Query: 362 RRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407 R + Y + N + T G RC+ A++ + + G + Sbjct: 241 RTFDITYENQNGEQQLAYQTCYG---ISERCIAALISMHGDDKGLI 283 >gi|195381439|ref|XP_002049456.1| GJ20738 [Drosophila virilis] gi|194144253|gb|EDW60649.1| GJ20738 [Drosophila virilis] Length = 1695 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 13/102 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1226 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIREL 1275 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 Q E +LV+ + S + E+L ++ E K+ Sbjct: 1276 EQLQNEKRKALVEHEHAKLSEIDERLKAELRDWREQLVPRKQ 1317 >gi|226311644|ref|YP_002771538.1| hypothetical protein BBR47_20570 [Brevibacillus brevis NBRC 100599] gi|226094592|dbj|BAH43034.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 334 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 16/97 (16%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + + L+ + ILS+D KN + + A + Sbjct: 192 KDVLENPDLISKTVLNKGLDAGTAFEILSIDIADVDVGKNIGAQLQTDQAEAD-----KR 246 Query: 58 IGQAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 I QA AE ++ + +K ++ E + Sbjct: 247 IAQAKAEERRAMAVAQEQEMIARVQEMKAKVVEAEAQ 283 >gi|195383822|ref|XP_002050624.1| GJ22258 [Drosophila virilis] gi|194145421|gb|EDW61817.1| GJ22258 [Drosophila virilis] Length = 2035 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1551 RELDEAYDKIEDLETKRKQLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNE 1610 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1611 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1638 >gi|156054658|ref|XP_001593255.1| hypothetical protein SS1G_06177 [Sclerotinia sclerotiorum 1980] gi|154703957|gb|EDO03696.1| hypothetical protein SS1G_06177 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1084 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 64/220 (29%), Gaps = 22/220 (10%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA-------RRNSNSAQIG 59 I ++ E AL+K + +L+ KNR + ++ R + Sbjct: 280 IVKDKEEASEALRK--------EVKNLEVKNRQAQSRKTALQKSLQTKQVERKKMHDEQA 331 Query: 60 QAIAEGN--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + E + ++ ET ++ E E+ +++ + I E G Sbjct: 332 RWKKEIKSMEAERESWSRETEEIR---VSTEARCEELRQNIRNVQDLITQYTREVAEKGL 388 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + R +RE +E E ++ + A + L LE Sbjct: 389 LVKKLEEERENLGIGLDDDQARE-WEASEKRNDAQWEVKNRAQHAHAQDCSQRLEQLENE 447 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 Q T+ + + L+ G P Sbjct: 448 -LQAAQANFTALYARLPNNQNQLMNHANSSGVDFDPNSQQ 486 >gi|109468610|ref|XP_575205.2| PREDICTED: transmembrane and coiled-coil domain-containing protein 5B [Rattus norvegicus] gi|109470550|ref|XP_001080546.1| PREDICTED: similar to RIKEN cDNA 1700095F04 [Rattus norvegicus] Length = 307 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 26/226 (11%), Positives = 59/226 (26%), Gaps = 13/226 (5%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL------SLVDALKNETSTLK 81 E I+ + + L +I + + + S + + + + S + LK + + LK Sbjct: 82 EIIVQKETALKDLELEIAKLEKKNKTLSKNVMELQKKISKGTKNAVSDPETLKKKVAELK 141 Query: 82 EQLP-------ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 +L EKE ++ S + + + E + V Sbjct: 142 VKLQKSTESCAQQEKEIAKMESDYQSVFQLCEDQAHYIKKYQEILREMEKEKEVMLLEKE 201 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 I ++ G + L F + + Sbjct: 202 ISKAQNDSSQVVKPGSTLVETIQSNMEKNIIKKQKRKFWLRHFRYLFFMIMIVIRLLGYV 261 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 + + + T + + D + T EV + Sbjct: 262 FFHLQYINPDFLVDTLPMLMSRSSLKWLRDILFPFLTLEVEDVLPH 307 >gi|84999120|ref|XP_954281.1| protein with kelch domain [Theileria annulata] gi|65305279|emb|CAI73604.1| conserved protein with kelch domain, putative [Theileria annulata] Length = 562 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 33/75 (44%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 SL + LI++ ++++ +N+ +I Q A L + + + + + QL ++ E Sbjct: 86 SLKSQRENLIREADELQKEKNAFVQKIKQERAIEAEKLAEDRRRQNAEIASQLKQIQIER 145 Query: 92 HEVCSSLKKLISCIP 106 + ++ + Sbjct: 146 EDSRRRIEDDWCKLE 160 >gi|239612679|gb|EEQ89666.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ER-3] gi|327351753|gb|EGE80610.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 569 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------------- 223 + ++G+ EV P + + +G + DDM+ Sbjct: 116 LTSFLRAQYIQYGFREVLTPSIYKKSLWEVSGHWQNYKDDMYEVRGRGATGEQTAETEIG 175 Query: 224 --DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + L P + L+ + + LPLR+ +P R+E + G+ R +F Sbjct: 176 EDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLS---GLTRVRRF 232 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + R + +E E L + ++ Sbjct: 233 HQDDGHIFCRPQQIGSEIESALKFTDTVMNIFGF 266 >gi|261191482|ref|XP_002622149.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239589915|gb|EEQ72558.1| threonyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] Length = 569 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT--------------- 223 + ++G+ EV P + + +G + DDM+ Sbjct: 116 LTSFLRAQYIQYGFREVLTPSIYKKSLWEVSGHWQNYKDDMYEVRGRGATGEQTAGTEIG 175 Query: 224 --DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + L P + L+ + + LPLR+ +P R+E + G+ R +F Sbjct: 176 EDESYGLKPMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLS---GLTRVRRF 232 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + + R + +E E L + ++ Sbjct: 233 HQDDGHIFCRPQQIGSEIESALKFTDTVMNIFGF 266 >gi|323490059|ref|ZP_08095280.1| hypothetical protein GPDM_11930 [Planococcus donghaensis MPA1U2] gi|323396355|gb|EGA89180.1| hypothetical protein GPDM_11930 [Planococcus donghaensis MPA1U2] Length = 328 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 18/98 (18%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + + L+ + ILS+D I ++ +++ + Sbjct: 191 KKVLENPDLISQTVLSKGLDSGTAFEILSID------IADVDIGKNIGAELQTEQAEADK 244 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 +I QA AE ++ +K + ++ ++ E E Sbjct: 245 KIAQAKAEERRAMAVASEQEMKAKVVEMRAKVVEAEAE 282 >gi|67466583|ref|XP_649439.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|56465890|gb|EAL44061.1| hypothetical protein EHI_124820 [Entamoeba histolytica HM-1:IMSS] Length = 281 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 46/95 (48%), Gaps = 3/95 (3%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI---GQAIAEGNLSLVDALKNE 76 K+ +E Q + + ++++N+ + K+IE+I+ +R N I + + E ++L E Sbjct: 77 KKGIEIQEKQVKEIEKENKKIRKEIEEIKKQRKENIENIEYQEKTLKEQTEHETESLIKE 136 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 ++KE + +E E ++ ++ + + Sbjct: 137 NLSIKEIIKQVELESDDIEEIEFQVNQLYQSEIED 171 >gi|293192627|ref|ZP_06609581.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309] gi|292820134|gb|EFF79131.1| threonine--tRNA ligase [Actinomyces odontolyticus F0309] Length = 677 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 63/203 (31%), Gaps = 20/203 (9%) Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 E + +D + G V L + ++ D H G+ V P Sbjct: 250 ERRDHRRLGAELDLYSFPEEIGPGLVVFHPKGGILRHEIESYVTDRH-KAAGFDFVHTPE 308 Query: 200 LVRDEAMYGTGQIPKFADDMFCTT----------------DGRWLIPTSEVSLTNLYSHE 243 + + + +G +P +AD MF +L + ++ Sbjct: 309 ISKGGLFHTSGHLPYYADTMFPPMLVDEERDEDGNVTKAGQEYYLKAMNCPMHNLIFRSR 368 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 + LPLRF L +R E G+ R F + + + E + E + Sbjct: 369 GRSYRELPLRFYELGHDYRYEKSG---VVHGLTRMRGFTQDDSHTYCTPEQASEEIRTQI 425 Query: 304 SCAEEILKRLDLHYRVVSLCTGD 326 + IL L + L T D Sbjct: 426 AFFLSILSAFGLKDFYLELSTRD 448 >gi|256786722|ref|ZP_05525153.1| threonyl tRNA synthetase [Streptomyces lividans TK24] gi|289770616|ref|ZP_06529994.1| threonyl-tRNA synthetase [Streptomyces lividans TK24] gi|289700815|gb|EFD68244.1| threonyl-tRNA synthetase [Streptomyces lividans TK24] Length = 421 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 50/193 (25%), Gaps = 13/193 (6%) Query: 153 FDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI 212 FD + L + + GY V +P+L + E +G Sbjct: 30 FDTDPLMGAGLPYWLPDGAVVRH--TLEEYVREAERRAGYRHVYSPVLGKRELYEISGHW 87 Query: 213 PKFADDMFCTTDGRWLIPTSEVSLTNLYS-----HEIIESKSLPLRFTTLAPSFRSEAGS 267 + DDMF + + + LPLR L +RSE Sbjct: 88 EHYRDDMFPPME-LGAEEVVLRPSLCPHHALVYRSRARSYRELPLRIAELGAMYRSEPSG 146 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL 327 G+ R + + + E L L + L Sbjct: 147 VL---GGLSRVRAIHLNDAHIFCTPDQAAAEARAALGLIRRAHADLGIRAARHRLSLP-- 201 Query: 328 GFSACKTYDLEVW 340 G D E+W Sbjct: 202 GPGGKYVADPELW 214 >gi|269926771|ref|YP_003323394.1| DNA repair protein RecN [Thermobaculum terrenum ATCC BAA-798] gi|269790431|gb|ACZ42572.1| DNA repair protein RecN [Thermobaculum terrenum ATCC BAA-798] Length = 577 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 41/98 (41%), Gaps = 3/98 (3%) Query: 2 LDI--QWIRQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LD+ + R+ ++ L+ R + E + I + DEK R L ++E++R + + + Sbjct: 306 LDLINKLKRKYGATIEEILQYRDNAEAELSDIENSDEKIRKLETQLENLRQQLAQKAKDL 365 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCS 96 ++ L ++ E + L +E + Sbjct: 366 SSIRSKAAKDLGRKIEQELNDLLMTNAQIEIKVGYKQP 403 >gi|154508918|ref|ZP_02044560.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC 17982] gi|153798552|gb|EDN80972.1| hypothetical protein ACTODO_01429 [Actinomyces odontolyticus ATCC 17982] Length = 677 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 53/172 (30%), Gaps = 20/172 (11%) Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 E + +D + G V L + ++ D H G+ V P Sbjct: 250 ERRDHRRLGAELDLYSFPEEIGPGLVVFHPKGGILRHEIESYVTDRH-KAAGFDFVHTPE 308 Query: 200 LVRDEAMYGTGQIPKFADDMFCTT----------------DGRWLIPTSEVSLTNLYSHE 243 + + + +G +P +AD MF +L + ++ Sbjct: 309 ISKGGLFHTSGHLPYYADTMFPPMLVDEERDEDGNVTKAGQEYYLKAMNCPMHNLIFRSR 368 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS 295 + LPLRF L +R E G+ R F + + + E + Sbjct: 369 GRSYRELPLRFYELGHDYRYEKSG---VVHGLTRMRGFTQDDSHTYCTPEQA 417 >gi|322696936|gb|EFY88721.1| putative threonine--tRNA ligase [Metarhizium acridum CQMa 102] Length = 491 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 59/178 (33%), Gaps = 32/178 (17%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + + A + L F+ + +G+ EV P + + +G + +ADDM+ Sbjct: 58 SPGSPIFLPNGARIFNRLIDFIRKQYA-RYGFQEVITPTIYKKALWAKSGHLENYADDMY 116 Query: 221 CT--------TDGRWLIPTSEVSL--------------------TNLYSHEIIESKSLPL 252 D + + +++ ++ + LP+ Sbjct: 117 TVTGNASTPGKDTGGCCGSDHGPVEPDSEADNEYGLKPMNCPGHCLIFASKVRSYRELPV 176 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 R+ +P R+E A G+ R +F + + R E ++ L + + Sbjct: 177 RYADFSPLHRNEVSGALS---GLTRVRRFHQDDGHIFCRPSQVEEEIKKTLDFVKAVY 231 >gi|295426265|ref|ZP_06818925.1| DNA topoisomerase (ATP-hydrolyzing) ParC [Lactobacillus amylolyticus DSM 11664] gi|295064004|gb|EFG54952.1| DNA topoisomerase (ATP-hydrolyzing) ParC [Lactobacillus amylolyticus DSM 11664] Length = 824 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 9/89 (10%) Query: 2 LD--IQWIR--QNPEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR +N L K + E Q+E I+SL + R+ ++ + A +N + Sbjct: 388 LDQVIKTIRASKNKADAKKNLIKEFKFTERQAEAIVSL-QLYRLTNTDVDALIAEQNDLN 446 Query: 56 AQIG--QAIAEGNLSLVDALKNETSTLKE 82 ++ Q + +L + E + +K+ Sbjct: 447 KKVAVYQKLLSDRATLEKEIIKELTAVKK 475 >gi|284161167|ref|YP_003399790.1| chromosome segregation protein SMC [Archaeoglobus profundus DSM 5631] gi|284011164|gb|ADB57117.1| chromosome segregation protein SMC [Archaeoglobus profundus DSM 5631] Length = 1135 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 14/106 (13%) Query: 4 IQWIRQ---NPEHLDIALKKR--HLEPQSEYILSLD-------EKNRILIKKIEDIRARR 51 I+ I + + L+ + +R +E IL L+ E+ R + K++ D+R +R Sbjct: 809 IKAIEEYKSSLNDLEKKITERLNGIEDAKAKILELERRLESLREEERRINKEVGDLREKR 868 Query: 52 NSNSAQIGQAIAEG-NLSLVDALKNE-TSTLKEQLPILEKEEHEVC 95 + +I + E +L + L E LKE+L +EK Sbjct: 869 DELLKEIDKLEKEKSQKTLAEKLLEERIKDLKEKLADVEKTLESYD 914 >gi|320333471|ref|YP_004170182.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319754760|gb|ADV66517.1| threonyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 649 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 50/157 (31%), Gaps = 10/157 (6%) Query: 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-- 220 + G + E + GY V P + E +G ++D F Sbjct: 270 PMWLPNGTILREE---LTRFLREQQFARGYQGVVTPNIGNLELYKTSGHYQNYSDSNFSP 326 Query: 221 -CTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 D ++++ +Y+ + + LP+R +R E + G+ R Sbjct: 327 ITVDDEQYMLKPMNCPHHVRIYASKPRSYRDLPVRLAEFGTVYRYEQSG---ELNGLTRV 383 Query: 279 HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 F + + R + E +L +L+ + Sbjct: 384 RGFTQDDAHLFCRPDQLKAEFLNVLDLTVLVLRTFGM 420 >gi|193216781|ref|YP_002000023.1| massive surface protein MspF [Mycoplasma arthritidis 158L3-1] gi|193002104|gb|ACF07319.1| massive surface protein MspF [Mycoplasma arthritidis 158L3-1] Length = 2993 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 49/121 (40%), Gaps = 7/121 (5%) Query: 4 IQWIRQNPEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIE----DIRARRNSNSAQ 57 ++ I+++ + + L ++ + + + + +E N+ L I+ D++ ++N + Sbjct: 1946 LEQIKKDLDKIKNDLDNANKNFDAKID-LNDKEEANKALKDAIDKATSDLQKQKNEANKI 2004 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 A + +++ ++L ++ +KE + + KK + E + Sbjct: 2005 QEDAKKLEANQEIKTIQDLIASLTKKYQDKQKEIKQTKDANKKKANDAIARADEALNKAN 2064 Query: 118 S 118 Sbjct: 2065 E 2065 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 3/160 (1%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ IR+N ++L+ A KK + + LD+K + L ++D + Q+ Sbjct: 839 IENIRENIKNLEEAAKKLEQKADKD---KLDQKIKNLNGALDDAKKDLAQKQKQLQSDKK 895 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 + LK TLKE ++ ++ + LE+ + Sbjct: 896 QNTEETDALLKETDKTLKEADEAIKNPSNKDEVKKVEDALNKAKTGLEKKKGSLVGDSEN 955 Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 + K + ++ E + +RA L+ Sbjct: 956 QRKIDEKLEEIVQKQQKLNNAKEKQQQSEDERAKALANEA 995 >gi|73960801|ref|XP_863642.1| PREDICTED: similar to CDC42-binding protein kinase alpha isoform B isoform 8 [Canis familiaris] Length = 1691 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 45/116 (38%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E+L ++ +R L+ I + +++ R L ++ E+ Sbjct: 487 LEIKTLKEEIENLRKQIRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIRTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|15616162|ref|NP_244467.1| cell wall-binding protein [Bacillus halodurans C-125] gi|10176224|dbj|BAB07319.1| cell wall-binding protein [Bacillus halodurans C-125] Length = 461 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 16/94 (17%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA----------------IAEGNLSLVD 71 I + ++ + ++ + A ++G + ++ Sbjct: 36 NQISDVQKERQEKQQEKQKTEAELKEVEKELGDITAEIERLDKEVEETSGKIQEKREEIE 95 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 ++ E LKEQ+ ILE+ E LK + Sbjct: 96 EVQAEIEELKEQIEILEERIAERDELLKDRARAM 129 >gi|309388927|gb|ADO76807.1| band 7 protein [Halanaerobium praevalens DSM 2228] Length = 326 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 16/97 (16%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + + L+ + ILS+D KN + + A + Sbjct: 188 KKVLENPDSISKTVLDKGLDSGTAFEILSIDIADVDVGKNIGAQLQTDQAEAD-----KE 242 Query: 58 IGQAIAEGNL----SLVDALKNETSTLKEQLPILEKE 90 I QA AE + +K ++ ++ E E Sbjct: 243 IAQAKAEERRAMAVAEEQEMKARVQEMRAKVVEAEAE 279 >gi|156836007|ref|XP_001642247.1| hypothetical protein Kpol_193p3 [Vanderwaltozyma polyspora DSM 70294] gi|156112723|gb|EDO14389.1| hypothetical protein Kpol_193p3 [Vanderwaltozyma polyspora DSM 70294] Length = 934 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 59/144 (40%), Gaps = 14/144 (9%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR----ILIKKIEDIRARRNSNSAQ 57 +DIQ +R+N E L + +++R + + + +++ +N+ L K+I +R N + Sbjct: 387 IDIQQLRENIESLKLTIQER--DNTIDQLKNIENQNKLEQDQLQKQITFMRTELNVQAK- 443 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN-VPLEEVPIG 116 + + L++A E + +QL + ++ S+ ++ PI Sbjct: 444 ------KHEIELLEAQSQEVNNGVQQLSMDMEKTPMRASNGSQVQKVQEMEYTSSGTPIL 497 Query: 117 TSANENILIRSVGKKPSAIHLSRE 140 E P + +++ E Sbjct: 498 NDLEEFASYGVPYGTPESNNINNE 521 >gi|123976345|ref|XP_001314483.1| hypothetical protein [Trichomonas vaginalis G3] gi|121896902|gb|EAY02039.1| hypothetical protein TVAG_383420 [Trichomonas vaginalis G3] Length = 737 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 51/138 (36%), Gaps = 5/138 (3%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE----QLP 85 I LD++ RIL + ++I+A+ + S + + + ++ L ++ ++ ++ Sbjct: 363 IQKLDKEKRILQSEYDNIKAQFDKISKENEENKKSKDFLEIE-LSEKSKLIQAATQREIM 421 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 +++E +K +I+ + ++ +++ E Sbjct: 422 STQEKEFHEQLISQKKKQIESLNAELVSHNLDIQRYKTIIQQWNQMNDELYKTKKQLEKC 481 Query: 146 EALGLMDFDRATKLSGAR 163 + + + TKL Sbjct: 482 KKSEMQNQLNDTKLYEQS 499 >gi|90579609|ref|ZP_01235418.1| putative type I restriction enzyme R protein [Vibrio angustum S14] gi|90439183|gb|EAS64365.1| putative type I restriction enzyme R protein [Vibrio angustum S14] Length = 1145 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 37/105 (35%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 KR + + + DE + +K++E+ + + + Q A+ + + D L++ T Sbjct: 148 KRKNKQLQQKLKEHDEILKQALKELEETKLAQLQAQKEAAQLKAQVDQAKADKLRSNTLA 207 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 +K E+E + EE S + Sbjct: 208 MKSSFDFNEEETRKRIIDADLRGCGWDVALDEESTEQVSKEFEVD 252 >gi|331226698|ref|XP_003326018.1| hypothetical protein PGTG_07848 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309305008|gb|EFP81599.1| hypothetical protein PGTG_07848 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1450 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 K+ ++ Q E I +++N L ++I + +N ++ +A EG +++ ++E Sbjct: 941 KKQIDSQEERISQSEQQNAELQEEIGALEQEKNVLIKEM-EAGKEGENRILEKSRSEVLE 999 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 LK+++ L++E L + + Sbjct: 1000 LKQKIHQLKEEAERTKQDLSQTKAAFEQNDH 1030 >gi|153853789|ref|ZP_01995145.1| hypothetical protein DORLON_01136 [Dorea longicatena DSM 13814] gi|149753539|gb|EDM63470.1| hypothetical protein DORLON_01136 [Dorea longicatena DSM 13814] Length = 466 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 176 TAQGIFVNFKNVQRTSRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 231 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + L L L V D L F + T D+E + Sbjct: 232 KPDTDLEWFDYWKKFCLNWLSSLGLKEDEVRYRDHDKEELSFYSKATTDVEFLFPF--GW 289 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 290 GELWGIADRTDY 301 >gi|147792206|emb|CAN68572.1| hypothetical protein VITISV_023885 [Vitis vinifera] Length = 674 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 50/158 (31%), Gaps = 12/158 (7%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDI------RARRNSNSAQIGQAI 62 N E L + L + +E + + + + L+K++E++ A +N + +A Sbjct: 513 DNNEELRVQLVR--VESELIAVRKVIADAKKLLKELEEMMEATKVEACQNEKENEAAEAK 570 Query: 63 AEGNLSLVDALKNETSTLK----EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + +D LK E L+ + LE+ ++L E G Sbjct: 571 CKDADQEIDQLKKELEELRVSSEAKRKELEELWSRFTIEKRELEEDYQKQVDEMFFFGYQ 630 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRA 156 + + + G A G + Sbjct: 631 CCMRKNDITHDIPHYPFNEEEDATVNGPAQGDKYLEAP 668 >gi|125980520|ref|XP_001354284.1| GA11463 [Drosophila pseudoobscura pseudoobscura] gi|54642590|gb|EAL31337.1| GA11463 [Drosophila pseudoobscura pseudoobscura] Length = 462 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 80/207 (38%), Gaps = 12/207 (5%) Query: 158 KLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 K + +D + G ++S P+L TG++ Sbjct: 40 KSGSNGTYQIMPIAQRSVDKFIDL-VDGNMKRAGGQKISLPILTPTGLWKKTGRLEGDIS 98 Query: 218 DMFCTTDGRW----LIPTSEVSLTNLYSHE-IIESKSLPLRFTTLAPSFRSEAGSAGRDT 272 + + D + PT E ++T + + I + +PLR + P FR E S Sbjct: 99 EFYMVRDRSGKQFLMSPTHEEAVTAMLATTAPISYRQMPLRLYQIGPKFRDELKSRF--- 155 Query: 273 RGMLRQHQFWKCELVSIT-REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 G++R +F ++ + EE + + + + + K+L++ + V+ TG +G S Sbjct: 156 -GLMRAKEFLMKDMYTFDVSEETARGTYSVVSEAYDRLFKQLEVPFVKVNAATGMMGGSL 214 Query: 332 CKTYDLEVWLAGQNLYREISSCSTCGN 358 Y V G++ + SSC GN Sbjct: 215 SHEY-HYVSPVGEDTLLQCSSCGYAGN 240 >gi|323701514|ref|ZP_08113187.1| hypothetical protein DesniDRAFT_0399 [Desulfotomaculum nigrificans DSM 574] gi|323533523|gb|EGB23389.1| hypothetical protein DesniDRAFT_0399 [Desulfotomaculum nigrificans DSM 574] Length = 1361 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 8/96 (8%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 + I + ALK I +D + R L ++ + ++ N+ +I Q Sbjct: 905 LHHINAQISAFEQALKDLG-------IEDIDRQLRELEQQRDALQREINALDKEIRQLEK 957 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 E + L LKE+ L + Sbjct: 958 EQGIEE-SRLSAARELLKEKEAALNQAREAWLCEWN 992 >gi|51245016|ref|YP_064900.1| prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|81826866|sp|Q6AP31|SYP_DESPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|50876053|emb|CAG35893.1| probable prolyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 570 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 E+ G S MN+R++D F + G+ V R + A +E + DG + Sbjct: 405 EVGHVFKLGTGYSESMNARFQDGTGDEKPFV--MGCYGIGVSRVVAAAIEQNHDKDG-II 461 Query: 409 IPTVLRPY 416 P L PY Sbjct: 462 FPVPLAPY 469 >gi|148688260|gb|EDL20207.1| mCG14319, isoform CRA_a [Mus musculus] gi|148688261|gb|EDL20208.1| mCG14319, isoform CRA_a [Mus musculus] Length = 495 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 11/107 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQIGQAIAEGNL 67 + A +KR+ E +L++ R L ++ E + N + + EG Sbjct: 381 QEYMEAQEKRNKE-------NLEQLRRKLEQEREQLIKDHNMMLEKLTKEQKTFREEGYK 433 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + + L+ E L + +++ + S+ + + P E Sbjct: 434 TQAEELRREIHQLGHNIKEMKQNGDSLVESILRSWFSFISPPSESEK 480 >gi|126157521|ref|NP_032646.2| macrophage activation 2 [Mus musculus] gi|223461585|gb|AAI41365.1| Guanylate binding protein 4 [Mus musculus] gi|223462784|gb|AAI47435.1| Guanylate binding protein 4 [Mus musculus] Length = 495 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 11/107 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQIGQAIAEGNL 67 + A +KR+ E +L++ R L ++ E + N + + EG Sbjct: 381 QEYMEAQEKRNKE-------NLEQLRRKLEQEREQLIKDHNMMLEKLTKEQKTFREEGYK 433 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + + L+ E L + +++ + S+ + + P E Sbjct: 434 TQAEELRREIHQLGHNIKEMKQNGDSLVESILRSWFSFISPPSESEK 480 >gi|323483766|ref|ZP_08089146.1| hypothetical protein HMPREF9474_00895 [Clostridium symbiosum WAL-14163] gi|323402957|gb|EGA95275.1| hypothetical protein HMPREF9474_00895 [Clostridium symbiosum WAL-14163] Length = 462 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 13/191 (6%) Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT 231 A + + +++ D + + + + M+ T Q +D T T Sbjct: 120 AWSQEEMKKYIDDNNICCPSCGKHDFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPET 175 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ N + + K +P + SFR+E R +F + EL Sbjct: 176 AQGIFVNFKNVQRTSRKKVPFGIAQVGKSFRNEI----TPGNFTFRTREFEQMELEFFCE 231 Query: 292 EEDSFTEHERMLSCAEEILKRL---DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + LK L ++ R +L F + T D+E + Sbjct: 232 PDTDLEWFAYWKEYCINWLKALGIKEVEMRARDHEQEELSFYSKATTDIEFLFPF--GWG 289 Query: 349 EISSCSTCGNF 359 E+ + ++ Sbjct: 290 ELWGIADRTDY 300 >gi|149248540|ref|XP_001528657.1| hypothetical protein LELG_01177 [Lodderomyces elongisporus NRRL YB-4239] gi|146448611|gb|EDK42999.1| hypothetical protein LELG_01177 [Lodderomyces elongisporus NRRL YB-4239] Length = 1003 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 8/122 (6%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE-------TSTLKE 82 ++ L+ + + +IE +A Q A ++ L+NE +K Sbjct: 809 VIQLESEIETIKTEIETAQAEEKEIQKQF-IAKQALQTKEIEQLENEYHEFETKIKEIKS 867 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHF 142 QL +++ + + +K+++ E + + K I + E F Sbjct: 868 QLSKSKQDSSQFSTKYQKILAKQSAKQDEVKLVQQELRNLKKNEILNKFSKRIKKTTEKF 927 Query: 143 EI 144 E Sbjct: 928 ET 929 >gi|229828494|ref|ZP_04454563.1| hypothetical protein GCWU000342_00556 [Shuttleworthia satelles DSM 14600] gi|229793088|gb|EEP29202.1| hypothetical protein GCWU000342_00556 [Shuttleworthia satelles DSM 14600] Length = 465 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 83/276 (30%), Gaps = 19/276 (6%) Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA-IHLSREHFEIGE 146 E + + + +K I P + I + + +G + H Sbjct: 40 ELKNNVKRAWWQKFIQESPQNVGIDGAILMNPQTWVASGHLGSFSDPLMDCKECHERFRA 99 Query: 147 ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAM 206 + DF + ++ + + + + ++ + + + + + + M Sbjct: 100 DKIIEDFAQEHQIV-----LPSSVDGWSNKEMEDWIQEHNVPCPSCGKHNFTEIRQFNLM 154 Query: 207 YGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAG 266 + T Q +D T T++ N + + K +P + SFR+E Sbjct: 155 FKTFQ--GVTEDAKNT--VYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI- 209 Query: 267 SAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD 326 R +F + EL + L L ++ + L D Sbjct: 210 ---TPGNFTFRTREFEQMELEFFCEPGTDMEWFHYWRGFCRDWLLSLGMNKDHIRLRDHD 266 Query: 327 ---LGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 L F + T D+E + E+ + ++ Sbjct: 267 KEELSFYSKGTTDIEYTFPF--GWGELWGIADRTDY 300 >gi|225561384|gb|EEH09664.1| threonyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 577 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 66/206 (32%), Gaps = 28/206 (13%) Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL-----GQFMIDLH 186 P S+ H ++ ++ ++ G L + Sbjct: 74 PHHGTYSQTHTLPPADHRVVGTEQELFVTSQ---YSPGSPLFLPNGTHILNKLTSFLRAQ 130 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----------------DGRWLI 229 +++G+ EV P + + +G + DDM+ + L Sbjct: 131 YTQYGFLEVLTPSIYKKSLWKVSGHWQNYKDDMYEVRGRNATGEQTAETQIGEDESYGLK 190 Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 P + L+ + + LPLR+ +P R+E + G+ R +F + + Sbjct: 191 PMNCPGHCLLFKSQNHSYRELPLRYADFSPLHRNEISGSLS---GLTRVRRFHQDDGHIF 247 Query: 290 TREEDSFTEHERMLSCAEEILKRLDL 315 R + +E E L + +++ Sbjct: 248 CRPQQIGSEIESALKFTDTVMRTFGF 273 >gi|86142242|ref|ZP_01060752.1| hypothetical protein MED217_11369 [Leeuwenhoekiella blandensis MED217] gi|85830994|gb|EAQ49451.1| hypothetical protein MED217_11369 [Leeuwenhoekiella blandensis MED217] Length = 688 Score = 41.7 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 9/114 (7%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA-QIGQAIAEG----- 65 +++ L KR E + I D + R I +++ A + +I A Sbjct: 212 QNVKANLIKRDEE---KTIRKQDVEAREAILELDKQLAEKEEQQKREIANIKAREEAETM 268 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 ++ + LK+ET+ + Q + EE+ + + +E + Sbjct: 269 KVAEEERLKSETARIATQEKVKVAEENMERQIIVAAKNKQRTDAVETERVEKDR 322 >gi|327440945|dbj|BAK17310.1| uncharacterized protein [Solibacillus silvestris StLB046] Length = 335 Score = 41.7 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 16/96 (16%) Query: 9 QNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQIGQA 61 +NP+ + + + L+ + ILS+D KN +IE +A +N I QA Sbjct: 199 ENPDLISQTVLSKGLDSGTAFEILSIDIADVDIGKNIGAELQIEQAQADKN-----IAQA 253 Query: 62 IAEGNLSLV----DALKNETSTLKEQLPILEKEEHE 93 AE ++ + + +K ++ E E Sbjct: 254 KAEERRAMAVASEQEMIAKVQEMKAKVVEAEAEVPM 289 >gi|295099693|emb|CBK88782.1| hypothetical protein [Eubacterium cylindroides T2-87] Length = 24 Score = 41.7 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 17/21 (80%) Query: 1 MLDIQWIRQNPEHLDIALKKR 21 MLDI+++R+NPE + ++K+ Sbjct: 1 MLDIKFVRENPEVVKENMRKK 21 >gi|89093362|ref|ZP_01166311.1| GAF domain protein [Oceanospirillum sp. MED92] gi|89082341|gb|EAR61564.1| GAF domain protein [Oceanospirillum sp. MED92] Length = 414 Score = 41.7 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 14 LDIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 ++ AL K + + L+ LD+ R L K+++++ Q +A+ +G + Sbjct: 193 IETALVKPGDSVELDQPLATLDD--RKLQLKLDNLQGEIQEKQKQYRRALVDGERGEAEV 250 Query: 73 LKNETSTLKEQLPILEKE 90 LK + Q + + + Sbjct: 251 LKAKLQKANAQFALAQHQ 268 >gi|323692739|ref|ZP_08106967.1| glycyl-tRNA synthetase [Clostridium symbiosum WAL-14673] gi|323503181|gb|EGB19015.1| glycyl-tRNA synthetase [Clostridium symbiosum WAL-14673] Length = 462 Score = 41.7 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 59/191 (30%), Gaps = 13/191 (6%) Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT 231 A + + +++ D + + + + M+ T Q +D T T Sbjct: 120 AWSQEEMKKYIDDNNICCPSCGKHDFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPET 175 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ N + + K +P + SFR+E R +F + EL Sbjct: 176 AQGIFVNFKNVQRTSRKKVPFGIAQVGKSFRNEI----TPGNFTFRTREFEQMELEFFCE 231 Query: 292 EEDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + LK L + R +L F + T D+E + Sbjct: 232 PDTDLEWFAYWKEYCINWLKALGIKEDEMRARDHEQEELSFYSKATTDIEFLFPF--GWG 289 Query: 349 EISSCSTCGNF 359 E+ + ++ Sbjct: 290 ELWGIADRTDY 300 >gi|225027257|ref|ZP_03716449.1| hypothetical protein EUBHAL_01513 [Eubacterium hallii DSM 3353] gi|224955410|gb|EEG36619.1| hypothetical protein EUBHAL_01513 [Eubacterium hallii DSM 3353] Length = 462 Score = 41.7 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 59/190 (31%), Gaps = 13/190 (6%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 + + F+ D + + + + + M+ T Q +D T T+ Sbjct: 121 WSQEKMKAFIDDNNVPCPSCGKHNFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPETA 176 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + K +P + SFR+E R +F + EL + Sbjct: 177 QGIFVNFKNVARTSRKKIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKP 232 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLYRE 349 + LK L L + + D L F + T D+E + E Sbjct: 233 DTDLEWFAYWKDFCVNWLKDLGLKDEELRIRDHDKEELSFYSKATSDIEFLFPF--GWGE 290 Query: 350 ISSCSTCGNF 359 + + ++ Sbjct: 291 LWGIADRTDY 300 >gi|27380648|ref|NP_772177.1| threonyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] gi|27353813|dbj|BAC50802.1| threonyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] Length = 723 Score = 41.7 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 94/317 (29%), Gaps = 28/317 (8%) Query: 21 RHLEPQSEYILSLDEKNRILIKK-----IEDI-RARRNSNSAQIGQAIAEGNLSLVDAL- 73 R+ E ++++K R +I + E R + G+A + LVDA+ Sbjct: 176 RNEPFTPEDFAAIEKKMREIIARDKPFTKEVWDREKTKQVFRDKGEAFK---VELVDAIP 232 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 NE + Q + +S K+ + + + +N +L R G + Sbjct: 233 GNEPIKIYYQGDWFDLCRGPHMTSTGKVGNAFKLMKVAGAYWRGDSNNPMLTRIYGTAFA 292 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER-ALGQFMIDLHTSEH-- 190 + + E D + + G L Sbjct: 293 KQEDLDAYLKQIEEAEKRDHRKLGRELDLFHFQEEGPGVVFWHPKGWTIFQQLIAYMRRR 352 Query: 191 ---GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEVSLTN 238 Y+EV+AP ++ +G + ++MF L P + Sbjct: 353 LTGDYSEVNAPQILDKVLWETSGHWGWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQ 412 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 ++ H + + LPLR R E A G++R F + + E+ E Sbjct: 413 IFKHGLKSYRDLPLRLAEFGVVHRYEPSGA---MHGLMRVRGFTQDDAHIFCTEDQLAEE 469 Query: 299 HERMLSCAEEILKRLDL 315 ++ Sbjct: 470 CLKINDLILSTYADFGF 486 >gi|261403115|ref|YP_003247339.1| serine/threonine protein kinase [Methanocaldococcus vulcanius M7] gi|261370108|gb|ACX72857.1| serine/threonine protein kinase [Methanocaldococcus vulcanius M7] Length = 864 Score = 41.7 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 5/75 (6%) Query: 13 HLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV 70 + L KR + + L + LIK+ E ++ + + I + + + Sbjct: 725 LFERHLAKRKEDRFQSIDEFLRALKSIEELIKEKESLK---KTLTQTIDKLKKSTDKKEI 781 Query: 71 DALKNETSTLKEQLP 85 + L E +L Sbjct: 782 ERLIRELVDSTTKLA 796 >gi|312144008|ref|YP_003995454.1| hypothetical protein Halsa_1677 [Halanaerobium sp. 'sapolanicus'] gi|311904659|gb|ADQ15100.1| hypothetical protein Halsa_1677 [Halanaerobium sp. 'sapolanicus'] Length = 327 Score = 41.7 bits (96), Expect = 0.27, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 16/97 (16%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + + L+ + ILS+D KN + + A + Sbjct: 188 KKVLENPDSISKTVLDKGLDSGTAFEILSIDIADVDVGKNIGAQLQTDQAEAD-----KE 242 Query: 58 IGQAIAEGNL----SLVDALKNETSTLKEQLPILEKE 90 I QA AE + +K ++ ++ E + Sbjct: 243 IAQAKAEERRAMAVAEEQEMKARVQEMRAKVVEAEAQ 279 >gi|302924192|ref|XP_003053833.1| hypothetical protein NECHADRAFT_31483 [Nectria haematococca mpVI 77-13-4] gi|256734774|gb|EEU48120.1| hypothetical protein NECHADRAFT_31483 [Nectria haematococca mpVI 77-13-4] Length = 485 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 51/158 (32%), Gaps = 31/158 (19%) Query: 186 HTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG-------------------- 225 +G+ EV P + + +G + +ADDM+ Sbjct: 83 QYVRYGFEEVITPTIYKKSLWAKSGHLENYADDMYAVRGNTEQPPAEHDGCCGSHPENLK 142 Query: 226 --------RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLR 277 L P + +++ + + LP+R+ +P R+E A G+ R Sbjct: 143 PEDEEEGDYGLKPMNCPGHCLIFASKRHSYRDLPIRYADFSPLHRNEISGALS---GLTR 199 Query: 278 QHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 +F + + R E ++ L + + L Sbjct: 200 VRRFHQDDGHIFCRPCQVEEEIKKTLDFVKVVYTVLRF 237 >gi|225868852|ref|YP_002744800.1| membrane protein [Streptococcus equi subsp. zooepidemicus] gi|225702128|emb|CAW99800.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus] Length = 509 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 10/78 (12%), Positives = 33/78 (42%), Gaps = 5/78 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + I ++++ + L +K++ + +++ + L++E +LKE+ Sbjct: 150 ELSKDDISKMEKEAKELQEKLDKLNGEIKDKDK-----LSDKQKEKIKDLEDEIESLKEK 204 Query: 84 LPILEKEEHEVCSSLKKL 101 + + + K++ Sbjct: 205 MKKDKGNKDLSEDMKKEM 222 >gi|299821885|ref|ZP_07053773.1| M48 family peptidase [Listeria grayi DSM 20601] gi|299817550|gb|EFI84786.1| M48 family peptidase [Listeria grayi DSM 20601] Length = 444 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 34/106 (32%), Gaps = 17/106 (16%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA---------QIGQ 60 + E ++K + LD++ + +I+ + ++ S + Sbjct: 32 DLEKKQESIKDKKTN--------LDKETQEKQSEIDKLEEQKKDASKDLNELLENIEKTN 83 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + V K E + +++ L+KE L + + Sbjct: 84 LKLKKQQEAVTKEKQEIKRIADKIQALKKEIKARQEVLNERARTLQ 129 >gi|156097506|ref|XP_001614786.1| prolyl-t-RNA synthase [Plasmodium vivax SaI-1] gi|148803660|gb|EDL45059.1| prolyl-t-RNA synthase, putative [Plasmodium vivax] Length = 476 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 16/193 (8%) Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 +SL N +E I +KSLPL FR+E R + + + +F + Sbjct: 128 TCEEQAISLINQVYNENIPAKSLPLLIHQFNYKFRNEK----RLEKTLFKSKEFLMKDGY 183 Query: 288 SITREEDSFTEHER-MLSCAEEILKRLDLHYRVVSLCTGD-LGFSACKTYDLEVWLAGQN 345 S + +E C E++ L L ++V D + + + Sbjct: 184 SFHSNDICLSETYEAYKECYEKVFSHLKLPFKVTKKRKMDKMNALESHEFQVLC---RDG 240 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDP-NSKSLKFTHTLNGS-GVAVGRCLIAILENYLNA 403 Y+E + G++ SR++ +Y + N KS F GS G+ + R L +++++ + Sbjct: 241 KYKEAAHIFKLGDYYSRKLGIKYLNKRNEKSNIFM----GSYGIGIYRLLYFLVDSFYDG 296 Query: 404 DGSVTIPTVLRPY 416 +G + +P + P+ Sbjct: 297 EG-IRLPAQVAPF 308 >gi|229163896|ref|ZP_04291836.1| Glycyl-tRNA synthetase [Bacillus cereus R309803] gi|228619517|gb|EEK76403.1| Glycyl-tRNA synthetase [Bacillus cereus R309803] Length = 458 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L +H + L +L + T D+E + Sbjct: 228 KPGEDLEWFAFWRETCKNWLLSLGMHEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|326931222|ref|XP_003211732.1| PREDICTED: rab GTPase-binding effector protein 1-like [Meleagris gallopavo] Length = 854 Score = 41.3 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+N E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 163 RENVEREIAELRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKEKLIE 220 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 221 AEEKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 280 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 281 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 320 >gi|15613920|ref|NP_242223.1| hypothetical protein BH1357 [Bacillus halodurans C-125] gi|81787324|sp|Q9KD62|Y1357_BACHD RecName: Full=UPF0365 protein BH1357 gi|10173973|dbj|BAB05076.1| BH1357 [Bacillus halodurans C-125] Length = 331 Score = 41.3 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIED-IRARRNSNSAQIGQ 60 D + + +NP+ + + K+ L+ + ILS+D + + K I ++ + +I Q Sbjct: 188 DHKKVLENPDTISQTVLKKGLDAGTAFEILSIDIADIDIGKNIGAGLQTDQAEADKKIAQ 247 Query: 61 AIAEGNLSLV----DALKNETSTLKEQLPILEKEEHE 93 A AE ++ ++ + ++ ++ E E Sbjct: 248 AKAEERRAMAVAKEQEMRAKVEEMRAKVVEAEAEVPM 284 >gi|118376896|ref|XP_001021630.1| hypothetical protein TTHERM_00149950 [Tetrahymena thermophila] gi|89303396|gb|EAS01384.1| hypothetical protein TTHERM_00149950 [Tetrahymena thermophila SB210] Length = 672 Score = 41.3 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 6/87 (6%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD + IRQ+ + + L+KR ++ + L +K +I+ + I Sbjct: 389 LDYEKIRQDKDRIMEELEKRQVDAN-DKYNELHQKYLNSQNEIQGLEREITVLQNFI--- 444 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILE 88 E + L+ + LK++L +E Sbjct: 445 --EEEKKEIQKLQMQHKILKDKLEEME 469 >gi|66516862|ref|XP_624208.1| PREDICTED: meiotic nuclear division protein 1 homolog [Apis mellifera] Length = 205 Score = 41.3 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 33/81 (40%), Gaps = 1/81 (1%) Query: 35 EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 E+ +IL+ ++E+++A+ + QI + ++ + ++ L + +E + Sbjct: 118 EERQILLHELEELKAKEDQLKKQISK-FSDADPEVIAKLLEKAKEYREATNKWTDNIFAI 176 Query: 95 CSSLKKLISCIPNVPLEEVPI 115 S K ++ I Sbjct: 177 QSWCKNKFDISEGYLNKQFNI 197 >gi|315652484|ref|ZP_07905469.1| glycyl-tRNA synthetase beta subunit [Eubacterium saburreum DSM 3986] gi|315485273|gb|EFU75670.1| glycyl-tRNA synthetase beta subunit [Eubacterium saburreum DSM 3986] Length = 462 Score = 41.3 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 175 TAQGIFVNFKNVQRTSRKKVPFGIGQVGKSFRNEI----TPGNFTFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + S + LK L + + L D L F + T D+E + Sbjct: 231 KPGSDLEWFDYWRSFCRDWLKALGIKEEQMRLRDHDKEELSFYSNATTDIEFLFPF--GW 288 Query: 348 REISSCSTCGNFQSRR 363 E+ + ++ R Sbjct: 289 GELWGIADRTDYDLNR 304 >gi|256810459|ref|YP_003127828.1| seryl-tRNA synthetase [Methanocaldococcus fervens AG86] gi|256793659|gb|ACV24328.1| seryl-tRNA synthetase [Methanocaldococcus fervens AG86] Length = 521 Score = 41.3 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 94/292 (32%), Gaps = 57/292 (19%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 K G T + L RAL + +++ + G+ E P L+ E MY + Sbjct: 208 VKKFPGRGQWFYTPPITALFRALEELIVEEVVKKIGFQECLFPKLIPLEIMYKMRYLEGL 267 Query: 216 ADDMFCTTDG---------------------------------RWLIPTSEVSLTNLYSH 242 + M+ L P + Sbjct: 268 PEGMYYVCPPKREPELFKEFVNEMMIKKEIPIEKLKNLLREPSYVLAPAQCEPFYQFFEG 327 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 E+I+ + F ++R E G A G+ R ++F + E V I E ++ Sbjct: 328 EVIDVDRPVMFFDRSGWTYRWEGGGAR----GLDRVNEFLRVECVWIGSPEFVEETRDKT 383 Query: 303 LSCAEEILKRLDLHYRV-----------VSLCTGDLGFSACKTYDLEVWLAGQNLYRE-- 349 L AE++ ++LDL Y V + F Y++ +WL R+ Sbjct: 384 LKYAEKLAQKLDLEYWVEVGDDPFYLEGRKKEDRGIEFPEVPKYEMRLWLPHIKDERKGV 443 Query: 350 -ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 ++S + G R +D + T +G + R ++ L Y Sbjct: 444 AVTSANVHGTHFVE--GFRIKDYKGRK---VWT-GCTGYGITRWVVGYLAQY 489 >gi|291165722|gb|EFE27770.1| hypothetical protein HMPREF0389_01401 [Filifactor alocis ATCC 35896] Length = 323 Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 42/98 (42%), Gaps = 18/98 (18%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + ++ L+ + ILS+D I I+ +++A + Sbjct: 188 KEVLENPDKISRTVLEKGLDSGTAFEILSID------IADIDIGRNIGAELQADQAEADK 241 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 +I QA AE ++ +K E +K ++ E Sbjct: 242 KIAQAKAEERRAMAIAKEQEMKAEVVQMKSKVVEAESR 279 >gi|195995537|ref|XP_002107637.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens] gi|190588413|gb|EDV28435.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens] Length = 7662 Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%) Query: 13 HLDIALKKRHLEPQSEYILSLDEKNRILIKKIE-DIRARRNSNSAQIGQAIAEGNLSLVD 71 ++ LK++HLE Q + L ++R + +IE + +N +I + +A Sbjct: 6927 EIEAELKEKHLEDQ----IKLRLEHREEMAEIERQAQEEQNKALEEIVEGMAAKLEEEDV 6982 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + + + KE+L E ++ + Sbjct: 6983 EFQKKAAEAKEKLSAEEFQKMLDDHEKELESMQQNQEI 7020 >gi|281411756|ref|YP_003345835.1| hypothetical protein Tnap_0317 [Thermotoga naphthophila RKU-10] gi|281372859|gb|ADA66421.1| conserved hypothetical protein [Thermotoga naphthophila RKU-10] Length = 758 Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+ E L LK+ ++ + + + L R L+++ ++R R+S +I + E Sbjct: 509 REQEEVLKNTLKEIGVDSE-DELKVL----RDLLERRANLRKTRDSLEKEIANFMKEKEE 563 Query: 68 SLVDALKNETSTLKEQLPILEKE 90 LK ++ +E E Sbjct: 564 IESSRSNARIEELKREVEQIESE 586 >gi|170288201|ref|YP_001738439.1| hypothetical protein TRQ2_0400 [Thermotoga sp. RQ2] gi|170175704|gb|ACB08756.1| conserved hypothetical protein [Thermotoga sp. RQ2] Length = 758 Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+ E L LK+ ++ + + + L R L+++ ++R R+S +I + E Sbjct: 509 REQEEVLKNTLKEIGVDSE-DELKVL----RDLLERRANLRKTRDSLEKEIANFMKEKEE 563 Query: 68 SLVDALKNETSTLKEQLPILEKE 90 LK ++ +E E Sbjct: 564 IESSRSNARIEELKREVEQIESE 586 >gi|148269526|ref|YP_001243986.1| hypothetical protein Tpet_0384 [Thermotoga petrophila RKU-1] gi|147735070|gb|ABQ46410.1| hypothetical protein Tpet_0384 [Thermotoga petrophila RKU-1] Length = 758 Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+ E L LK+ ++ + + + L R L+++ ++R R+S +I + E Sbjct: 509 REQEEVLKNTLKEIGVDSE-DELKVL----RDLLERRANLRKTRDSLEKEIANFMKEKEE 563 Query: 68 SLVDALKNETSTLKEQLPILEKE 90 LK ++ +E E Sbjct: 564 IESSRSNARIEELKREVEQIESE 586 >gi|196249826|ref|ZP_03148522.1| glycyl-tRNA synthetase [Geobacillus sp. G11MC16] gi|196210702|gb|EDY05465.1| glycyl-tRNA synthetase [Geobacillus sp. G11MC16] Length = 460 Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 173 TAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + + +E L L + H R+ +L + T D+E + Sbjct: 229 KPGEELKWFDYWKQFCKEWLLSLGMNEEHIRLRDHTKEELSHYSNATTDIEYQFPF--GW 286 Query: 348 REISSCSTCGNF 359 E+ ++ ++ Sbjct: 287 GELWGIASRTDY 298 >gi|123509431|ref|XP_001329862.1| ankyrin repeat protein [Trichomonas vaginalis G3] gi|121912911|gb|EAY17727.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3] Length = 536 Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 6/132 (4%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS-----AQIGQAIAE- 64 + L LK R L+ ++ + D++ LI +I++++ + N+ +I IAE Sbjct: 85 LKTLKEFLKMRILDGVIDFFIQSDKEKSDLINQIQNLQEKLNTIQNQESNKEIQSKIAEL 144 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 N +++ N L Q + K N+ + G L Sbjct: 145 KNSDNFESVYNFFDELSSQGNTKVISKACEEGLWKMKGKIGINILHQASRYGNLKLVKSL 204 Query: 125 IRSVGKKPSAIH 136 I + Sbjct: 205 IECNCNIETPND 216 >gi|218678931|ref|ZP_03526828.1| tRNA synthetase class II (G H P and S) [Rhizobium etli CIAT 894] Length = 163 Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 46/144 (31%), Gaps = 14/144 (9%) Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 + LPL S+R E +R +FW+ E + Sbjct: 9 MQHILGNHSRTRLPLCVWQAGRSYRREQE----QPMKHMRLKEFWQLEFQCAFTADSGND 64 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357 H L ++ L +H + + L + T D+EV + + E+ S S Sbjct: 65 YHAACLEPVRRMIASL-IHLPTRIVPSDRLPAYSEVTMDIEV--DNDDKWMEVCSISRRT 121 Query: 358 NF-QSRRMNSRYRDPNSKSLKFTH 380 +F Q RYR K H Sbjct: 122 DFPQ------RYRSQPKKGPDIEH 139 >gi|15644491|ref|NP_229543.1| hypothetical protein TM1745 [Thermotoga maritima MSB8] gi|4982323|gb|AAD36810.1|AE001813_2 hypothetical protein TM_1745 [Thermotoga maritima MSB8] Length = 207 Score = 41.3 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 41/91 (45%), Gaps = 7/91 (7%) Query: 7 IRQNPEHLDIALKKR------HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 IR E L +ALK R +L+ + + L + ++++ ++ + + Sbjct: 77 IRDE-EQLKLALKTRIAEALNNLDLNDDQLKELYNVAKETKEQLDSLKEKFVQLHEEYYN 135 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 A+ + + + LK++ L++++ + K+ Sbjct: 136 ALVKRDTKTAEDLKDQIDDLRDEVQDIYKDF 166 >gi|326392598|ref|ZP_08213940.1| tRNA synthetase class II (G H P and S) [Thermoanaerobacter ethanolicus JW 200] gi|325991362|gb|EGD50012.1| tRNA synthetase class II (G H P and S) [Thermoanaerobacter ethanolicus JW 200] Length = 53 Score = 41.3 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL-IPTSE 233 M+DLH +HGYTEV P +V +M+GTGQ+PKF +D F + IPT+E Sbjct: 1 MLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPKFEEDAFKVYGTDYFLIPTAE 53 >gi|219110281|ref|XP_002176892.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411427|gb|EEC51355.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 671 Score = 41.3 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 66/393 (16%), Positives = 116/393 (29%), Gaps = 36/393 (9%) Query: 37 NRILIKKIEDIRARRNSNSAQIGQAIAEG-NLSLVDALKNETSTLKEQLPILEKEEHEVC 95 N+ +E+ + +I G + S V L +E LK +L E + Sbjct: 87 NKETKASVEE---QIKVKGDEIRALKESGADKSTVAPLIDELLALKAKLDPSILEPPKKA 143 Query: 96 SSLKKLISCIPNVP-----LEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG----- 145 + N + I + + + + + + Sbjct: 144 PKAQTQPKKQQNQSGKRENDDSDFITAREVDYSKWYNDIVRVTGLAETSPVRGCMVIKPW 203 Query: 146 --EALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRD 203 + + K+ L + L + + V+ L + Sbjct: 204 GMSLWDRVRTELDAKIQAHGAENAYFPLLIPQSFLSKEAEHVDGFAKECAVVTHHRLTTN 263 Query: 204 EAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 G P+ A D + PTSE + ++ I+ + LPL+ A R Sbjct: 264 PDGSGLMVDPEAA-----LEDPLIVRPTSETMIWYMFRKWIVSHRDLPLKINQWANVMRW 318 Query: 264 EAGSAGRDTRGMLRQHQFWKCELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVS 321 E TR LR +F E TR+ + + A L + Sbjct: 319 E-----MRTRPFLRTSEFLWQEGHTAHATRDGAIADAQAMLDNYATLCEDLLAMPVVRGV 373 Query: 322 LCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQS--RRMNSRYRDPNSKSLKFT 379 + A TY +E + QN + S S QS + N ++D N Sbjct: 374 KSPSERFAGAEDTYTIEALM--QNGWALQSGTSHFLG-QSFGKAFNVTFQDENGTQQDVW 430 Query: 380 HTLNGSGVAVGRCLIAILENYLNADGSVTIPTV 412 T S A R + A++ + + G V P V Sbjct: 431 GT---SWGASTRLIGALIMTHSDDAGLVLPPKV 460 >gi|123444611|ref|XP_001311074.1| hypothetical protein [Trichomonas vaginalis G3] gi|121892870|gb|EAX98144.1| hypothetical protein TVAG_332540 [Trichomonas vaginalis G3] Length = 755 Score = 41.3 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 58/157 (36%), Gaps = 7/157 (4%) Query: 7 IRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRA---RRNSNSAQIGQA 61 I E + I + +++E I LD + + +IKK+E R+ + N N +I + Sbjct: 298 IIDELESIKIDINSKNIEINKFKNEIEQLDGEKKEIIKKLESQRSINNQINDNEQKISKN 357 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 E S ++ +K ++ K E SL + I +E + Sbjct: 358 KKEIK-SKINEIKELIHEEIDE-ENFSKIIKEKQKSLNNEENSIRVETDKEKTKYEKSQI 415 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 + + + + ++ E LG DF+ K Sbjct: 416 ELDSKEKSLENKNKTKNDIESDLIENLGSTDFENEYK 452 >gi|302340220|ref|YP_003805426.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301637405|gb|ADK82832.1| prolyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 562 Score = 41.3 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSV 407 E+ + G+F +R M +R+ N K L + H GS G+ + R L AI E + G + Sbjct: 404 ELGNIFKLGDFYARGMELVFREENGKRL-YPHM--GSYGIGIDRLLGAIAETKRDERGLL 460 Query: 408 TIPTVLRPY----MN 418 P L PY M Sbjct: 461 W-PPSLAPYRFFLMG 474 >gi|296424137|ref|XP_002841606.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637851|emb|CAZ85797.1| unnamed protein product [Tuber melanosporum] Length = 672 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 3/141 (2%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRAR--RNSNSAQIGQAIAEGNLS 68 + L L+ R + ++ K + +I+ +RA RN ++ + Sbjct: 383 LDVLLEQLRARGEHGFLN-LKEVERKRKEREIEIQRLRAEDARNKIKKEVIPPLDPARKE 441 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 V+ E S + K + + + + + E + + S Sbjct: 442 KVEKTFAEVSRSGLNKTYITKWNIPITNRDFERLKPNQWLNDEIINFYMNLICERTNSSF 501 Query: 129 GKKPSAIHLSREHFEIGEALG 149 P I +F G Sbjct: 502 PNGPKKIFAHNTYFWPKLKDG 522 >gi|309808038|ref|ZP_07701957.1| putative threonine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] gi|308168721|gb|EFO70820.1| putative threonine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] Length = 377 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 87/254 (34%), Gaps = 18/254 (7%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE-Q 83 ++ + L+++ + ++K E I S + + + ++ LK E + + Sbjct: 113 IKASELPDLEKEMQKIVKNGEKI--EYKIVSKSELLDLFKDDPYKLELLKEEADEVAVYK 170 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 L + + + ++ +L R G + + Sbjct: 171 LEDFVDFGFNALLMNTGKLKHFKLLSVAGAYWQGKSSNPMLQRIFGTAFFKEADLKADLQ 230 Query: 144 IGEALGLMDFDRATK---------LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 E + D + GA A + R + +++ID ++ GY Sbjct: 231 RREDIKERDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVIERYIIDKEVAD-GYQH 289 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTD-----GRWLIPTSEVSLTNLYSHEIIESKS 249 V P+L+ +A +G + +DMF D L P + S +Y+H I + Sbjct: 290 VYTPVLMNLDAYKTSGHWAHYREDMFPPMDMGDGEMLELRPMNCPSHIQIYNHHIRSYRE 349 Query: 250 LPLRFTTLAPSFRS 263 LP+R L RS Sbjct: 350 LPIRIAELGMMHRS 363 >gi|195942225|ref|ZP_03087607.1| hypothetical protein Bbur8_05115 [Borrelia burgdorferi 80a] gi|195942520|ref|ZP_03087902.1| hypothetical protein Bbur8_06714 [Borrelia burgdorferi 80a] gi|312149975|gb|ADQ30036.1| Erp27 protein [Borrelia burgdorferi N40] Length = 255 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 4 IQWIRQNPEHLDIALKKRH-LEPQSEYILSLDEKNRILIKK-IEDIRARRNSNSAQIGQA 61 I+ IR+ E + L+ + LE + E + K + KK +E ++ + N QIG A Sbjct: 128 IKKIRKQLEDIGDKLEDKGKLEIKLEELEDSLTKKKETRKKALEKVKEKLNEFKEQIGSA 187 Query: 62 IAEGNLSLVDA 72 + + V Sbjct: 188 SGQSDAEKVKE 198 >gi|188996121|ref|YP_001930372.1| chromosome segregation protein SMC [Sulfurihydrogenibium sp. YO3AOP1] gi|188931188|gb|ACD65818.1| chromosome segregation protein SMC [Sulfurihydrogenibium sp. YO3AOP1] Length = 1172 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 6/100 (6%) Query: 5 QWIRQNPEHLD---IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 + + E L + K R + +SE +L+++ +IE+I++ +S + Q+ + Sbjct: 810 KELENQIEKLKSKVESHKIRVFQIESEK-SALEKEFHDKKSEIENIKSEIDSLTKQLSEL 868 Query: 62 IA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 +G + L N S LK+QL L EE + Sbjct: 869 WKGLKGQEEEREKLINTISNLKDQLKNLRYEEDNINRQTT 908 >gi|319651603|ref|ZP_08005730.1| hypothetical protein HMPREF1013_02342 [Bacillus sp. 2_A_57_CT2] gi|317396670|gb|EFV77381.1| hypothetical protein HMPREF1013_02342 [Bacillus sp. 2_A_57_CT2] Length = 332 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 40/98 (40%), Gaps = 18/98 (18%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + + L+ + ILS+D I ++ +++ + Sbjct: 192 KKVLENPDMISQTVLSKGLDAGTAFEILSID------IADVDIGKNIGAELQTEQAEADK 245 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 +I QA AE ++ +K ++ ++ E + Sbjct: 246 KIAQAKAEERRAMAVAQEQEMKARVEEMRAKVVEAEAQ 283 >gi|227874495|ref|ZP_03992668.1| glycine--tRNA ligase [Oribacterium sinus F0268] gi|227839661|gb|EEJ50118.1| glycine--tRNA ligase [Oribacterium sinus F0268] Length = 428 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 9/123 (7%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 141 TAQGIFVNFKNVQRSSRKKLPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 196 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + ++ L L + R +L F + T DLE + Sbjct: 197 KPDTDLEWFHYWKDYCQKWLLNLGMKPEMLRARDHEAAELSFYSKATTDLEFLFPF--GW 254 Query: 348 REI 350 E+ Sbjct: 255 GEL 257 >gi|295667866|ref|XP_002794482.1| chaperone protein clpB [Paracoccidioides brasiliensis Pb01] gi|226285898|gb|EEH41464.1| chaperone protein clpB [Paracoccidioides brasiliensis Pb01] Length = 732 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 15/102 (14%) Query: 17 ALKKRHLEPQSEY--------ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 AL +R E I LD + + ++E +R + S + Sbjct: 252 ALARRFQPIVVEEPSESKPDAIQELDRQIMTIQIELESLRKETDIPSKE-------RREK 304 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 L + LK + +KE + EKE+ E+ + + Sbjct: 305 LEELLKTKQDEVKEFTDVWEKEKAELDAIKQAKEDLERARVD 346 >gi|197303356|ref|ZP_03168396.1| hypothetical protein RUMLAC_02079 [Ruminococcus lactaris ATCC 29176] gi|197297640|gb|EDY32200.1| hypothetical protein RUMLAC_02079 [Ruminococcus lactaris ATCC 29176] Length = 478 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 188 TAQGIFVNFKNVQRTSRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 243 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + + L L L V D L F + T D+E + Sbjct: 244 KPDTDLEWFDYWKNFCLNWLSSLGLKEDEVRYRDHDKEELSFYSKATTDVEFLFPF--GW 301 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 302 GELWGIADRTDY 313 >gi|149442096|ref|XP_001518791.1| PREDICTED: similar to rabaptin, RAB GTPase binding effector protein 1, partial [Ornithorhynchus anatinus] Length = 722 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 316 RETAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKEKLTE 373 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL- 124 + + E S +KE LE E +++ +V E+ + Sbjct: 374 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCR 433 Query: 125 -----IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 434 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRLESV 473 >gi|325849493|ref|ZP_08170774.1| shikimate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480113|gb|EGC83188.1| shikimate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 495 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 42/127 (33%), Gaps = 18/127 (14%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNS------N 54 M DI+ IR+N +D + I+ L E+ L KK+ + N Sbjct: 1 MEDIKDIRENINKVD------------DKIIKLLEERFDLSKKVRAYKISHNKKVYDPIR 48 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 +I + I E N + +Q L++ + KKL + E++ Sbjct: 49 EKEILKKIQEKNPEYGKYFVKIYQEIMDQSKNLQRNDENYGLLGKKLGHSYSKIIHEKIG 108 Query: 115 IGTSANE 121 Sbjct: 109 YYDYQYF 115 >gi|212224655|ref|YP_002307891.1| hypothetical protein TON_1504 [Thermococcus onnurineus NA1] gi|212009612|gb|ACJ16994.1| hypothetical protein, conserved [Thermococcus onnurineus NA1] Length = 300 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 73/216 (33%), Gaps = 14/216 (6%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 +PE + KR I +L+++ + K+E++ QI + + Sbjct: 6 DPEEIKR--IKR-------EIEALEKERNEIRAKLEELEKEL-----QIWIQKRDEKNNE 51 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 V L+ + K + + ++ E+ + +++ + + + E + T +E +R + Sbjct: 52 VKGLRQKGREYKAKRDEINQQIQELKKNREEINAKLDLLYQEILEYRTKRDEYNQLRRLK 111 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 P I E E K + VL L +++A + T + Sbjct: 112 MPPEKIQERIEKLEWELQTNPNITPEREKQIVDQIQVLATELEIIQQAGRFHNKLVETRK 171 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG 225 A + E Q +F + M + Sbjct: 172 KVDQLKKARRAISMEIQKLANQSQQFHEQMIKAFNQ 207 >gi|138897004|ref|YP_001127457.1| glycyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|166227934|sp|A4ITQ8|SYG_GEOTN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|134268517|gb|ABO68712.1| Glycyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] Length = 466 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 179 TAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 234 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + + +E L L + H R+ +L + T D+E + Sbjct: 235 KPGEELKWFDYWKQFCKEWLLSLGMNEEHIRLRDHTKEELSHYSNATTDIEYQFPF--GW 292 Query: 348 REISSCSTCGNF 359 E+ ++ ++ Sbjct: 293 GELWGIASRTDY 304 >gi|11561806|gb|AAC83688.2| 101 kDa heat shock protein [Nicotiana tabacum] Length = 909 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 2/87 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 393 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKARLIEVRKELDD 452 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVC 95 L D L+ K++ +++ Sbjct: 453 LRDKLQPLMMRYKKEKERIDELRRLKQ 479 >gi|225870143|ref|YP_002746090.1| membrane protein [Streptococcus equi subsp. equi 4047] gi|225699547|emb|CAW93138.1| putative membrane protein [Streptococcus equi subsp. equi 4047] Length = 515 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 15/101 (14%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ---------------AIAEGNLS 68 E + I ++++ + L +K + + Q + +GN Sbjct: 152 ELSKDDISKMEKEAKELQEKFDKLNGELKDKDKQKEKIKDLEDEIDSLKEKMKKDKGNKD 211 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 L + +K E L +++ LEK+ E S + + S P P Sbjct: 212 LSEDMKKEIDKLTDKVKELEKKATETKKSSEAINSVTPISP 252 >gi|167750313|ref|ZP_02422440.1| hypothetical protein EUBSIR_01287 [Eubacterium siraeum DSM 15702] gi|167656673|gb|EDS00803.1| hypothetical protein EUBSIR_01287 [Eubacterium siraeum DSM 15702] gi|291529864|emb|CBK95449.1| glycyl-tRNA synthetase [Eubacterium siraeum 70/3] Length = 458 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 20/189 (10%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 171 TAQGIFVNFMNIQRTTRKKVPFGVAQVGKSFRNEI----TPGNFIFRVREFEQMELEFFC 226 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + ++ L L ++ + L D L F + T D E + Sbjct: 227 KPGTDLDWFYFWKDYCKKWLLSLGINEENLRLRDHDQEELCFYSKATTDFEYLFPF--GW 284 Query: 348 REISSCSTCGNF------QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL-ENY 400 E+ + ++ ++ Y DP + + + S + V R +A++ E Y Sbjct: 285 GELWGVADRTDYDLTQHIKTSGQKMEYFDPETNEKYVPYVIEPS-LGVERLFLAVITEAY 343 Query: 401 ---LNADGS 406 DG+ Sbjct: 344 DEEQLEDGT 352 >gi|322785593|gb|EFZ12248.1| hypothetical protein SINV_04574 [Solenopsis invicta] Length = 788 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 40/154 (25%), Gaps = 17/154 (11%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA---IAEGNLSLVDALKNETST 79 L + + +LD + R + NS S IG G L+ L+ Sbjct: 296 LNIDLDQLGNLDSERRNSLT--------LNSCSKVIGALDVIKNRGKLTTPTPLE----- 342 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 ++ +EK ++ + + + K + Sbjct: 343 -SSRIFDIEKVSKDLQQQQRDETMSCVTSIHDYENVCPLGVARPPWCIRSWKGYMDIETY 401 Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 H + D +T + G ++ Sbjct: 402 IHDDSVVRDRRRDTLTSTTGTTYSSEYSDGMISR 435 >gi|148270174|ref|YP_001244634.1| hypothetical protein Tpet_1040 [Thermotoga petrophila RKU-1] gi|170288871|ref|YP_001739109.1| hypothetical protein TRQ2_1080 [Thermotoga sp. RQ2] gi|281412484|ref|YP_003346563.1| hypothetical protein Tnap_1062 [Thermotoga naphthophila RKU-10] gi|147735718|gb|ABQ47058.1| hypothetical protein Tpet_1040 [Thermotoga petrophila RKU-1] gi|170176374|gb|ACB09426.1| conserved hypothetical protein [Thermotoga sp. RQ2] gi|281373587|gb|ADA67149.1| conserved hypothetical protein [Thermotoga naphthophila RKU-10] Length = 207 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 41/91 (45%), Gaps = 7/91 (7%) Query: 7 IRQNPEHLDIALKKR------HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 IR E L +ALK R +L+ + + L + ++++ ++ + + Sbjct: 77 IRDE-EQLKLALKTRIAEALNNLDLNDDQLKELYNVAKETKEQLDSLKEKFVQLHEEYYN 135 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 A+ + + + LK++ L++++ + K+ Sbjct: 136 ALVKRDTKTAEDLKDQIDDLRDEVQDIYKDF 166 >gi|301095894|ref|XP_002897046.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4] gi|262108475|gb|EEY66527.1| threonyl-tRNA synthetase [Phytophthora infestans T30-4] Length = 725 Score = 41.3 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 59/184 (32%), Gaps = 32/184 (17%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLI-PTSEVSLTNLYSHEIIE- 246 GY EV PL+ + E +G + + DDMF + G E T+ + E + Sbjct: 353 RRGYDEVITPLIFKKELWETSGHLQNYHDDMFMVSQGIATDDACEEHGHTHSHGEEEYDQ 412 Query: 247 ----------------------SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + LP+R + R+EA A G+ R +F + Sbjct: 413 FGLKPMNCPGHCLLFREAKKYSYRELPVRLADFSALHRNEASGALT---GLTRVRRFHQD 469 Query: 285 ELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + +E L + + D + + DLE+W + Sbjct: 470 DAHIFCTAAQVQSEMSLALDFIKHVYGIFDFKFNLRLSTR-----PEKYMGDLELWDDAE 524 Query: 345 NLYR 348 + R Sbjct: 525 DQLR 528 >gi|255537725|ref|XP_002509929.1| Centromeric protein E, putative [Ricinus communis] gi|223549828|gb|EEF51316.1| Centromeric protein E, putative [Ricinus communis] Length = 1718 Score = 41.3 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 AL+ R+ + S I++L + L +++ ++A +N Q+ + + NL ++ ++N Sbjct: 1337 AALQARYEDEASAKIMTLTAQANSLQLELDSLQAEKNELQLQLEKEK-QDNLGILAQMEN 1395 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 E + L ++ +K E +++K V Sbjct: 1396 EKTELMSRITDQQKVLEEKEDTVRKFSEEFKQVEH 1430 >gi|296202329|ref|XP_002748344.1| PREDICTED: rab GTPase-binding effector protein 1 [Callithrix jacchus] Length = 855 Score = 41.3 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 51/153 (33%), Gaps = 3/153 (1%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEV-CSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + + E S +KE LE E+ + + L+E + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRXXLEQERQ 264 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + F + L + D R + Sbjct: 265 QHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 297 >gi|229076294|ref|ZP_04209259.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-18] gi|229099375|ref|ZP_04230305.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|229105535|ref|ZP_04236169.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|229118387|ref|ZP_04247741.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228664957|gb|EEL20445.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228677805|gb|EEL32048.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228683999|gb|EEL37947.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|228706729|gb|EEL58937.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-18] Length = 495 Score = 41.3 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 209 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 264 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L +H + L +L + T D+E + Sbjct: 265 KPGEDLEWFAFWRETCKNWLLSLGMHEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 322 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 323 GELWGVASRTDFDLKR 338 >gi|213409151|ref|XP_002175346.1| predicted protein [Schizosaccharomyces japonicus yFS275] gi|212003393|gb|EEB09053.1| predicted protein [Schizosaccharomyces japonicus yFS275] Length = 1229 Score = 41.3 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 67/231 (29%), Gaps = 14/231 (6%) Query: 11 PEHLDIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 PE L + +RH++P + + ++IE RA + +I +A +G + Sbjct: 615 PEEL-EIIARRHVDPMVDELSERAAADRLAKEQQIEAKRA--KKEAKEIEKARKKGGKAN 671 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 + L + KE L ++ + + E I + N + + V Sbjct: 672 L--LPKAHARDKEDLAEHTAALPLSVPAIAEHVQPQSQ---ESRSISSFGNAPVGVGGVP 726 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 +P ++ + +D + A + + + + E Sbjct: 727 HEP--YNMPATDQDTMNHERFVDQNVAHTVELQAPTHPHPEPLRAHASGINLDVLQRVEE 784 Query: 190 HGYTEVSAPLLVRDEAMYG---TGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 V + D + + D+ P +E Sbjct: 785 GDTGHVQTTEITADGGVSARPVDDDYGRTNDEQTDVAGAASFSPNNEPPAI 835 >gi|291556422|emb|CBL33539.1| glycyl-tRNA synthetase [Eubacterium siraeum V10Sc8a] Length = 458 Score = 41.3 bits (95), Expect = 0.35, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 20/189 (10%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 171 TAQGIFVNFMNIQRTTRKKVPFGVAQVGKSFRNEI----TPGNFIFRVREFEQMELEFFC 226 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + ++ L L ++ + L D L F + T D E + Sbjct: 227 KPGTDLDWFYFWKDYCKKWLLSLGINEENLRLRDHDKEELCFYSKATTDFEYLFPF--GW 284 Query: 348 REISSCSTCGNF------QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL-ENY 400 E+ + ++ ++ Y DP + + + S + V R +A++ E Y Sbjct: 285 GELWGVADRTDYDLTQHIKTSGQKMEYFDPETNEKYVPYVIEPS-LGVERLFLAVITEAY 343 Query: 401 ---LNADGS 406 DG+ Sbjct: 344 DEEQLEDGT 352 >gi|315604309|ref|ZP_07879375.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315314015|gb|EFU62066.1| threonine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 677 Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 59/191 (30%), Gaps = 20/191 (10%) Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 D + G V L + ++ D H G+ V P + + + +G Sbjct: 262 DLFSFPEEIGPGLVVFHPKGGILRHEIESYVTDRH-KRAGFDFVHTPEISKGGLFHTSGH 320 Query: 212 IPKFADDMFCTT----------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 +P +AD MF +L + ++ + LPLRF Sbjct: 321 LPYYADTMFPPMLVDEERDADGNVTKAGQEYYLKAMNCPMHNLIFRSRGRSYRELPLRFY 380 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 L +R E G+ R F + + + E + E + IL L Sbjct: 381 ELGHDYRYEKSG---VVHGLTRMRGFTQDDSHTYCTPEQASQEIRTQIEFFLSILSAFGL 437 Query: 316 HYRVVSLCTGD 326 + L T D Sbjct: 438 KDFYLELSTRD 448 >gi|255725292|ref|XP_002547575.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240135466|gb|EER35020.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 260 Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 24/67 (35%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 D + + + + + +R S Q QA +G+ L E+ + ++ ++ E Sbjct: 26 DSEYKKFRAEADQLYKKRQKLSQQSQQAFKQGDKQRAHELSEESKQILQKAEEYNRKAAE 85 Query: 94 VCSSLKK 100 Sbjct: 86 YVFRENN 92 >gi|193207723|ref|NP_507039.2| hypothetical protein F14H3.5 [Caenorhabditis elegans] Length = 232 Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 11/89 (12%) Query: 12 EHLDIALKKRHLEPQS--EYILSLD----EKNRILIKKIEDIRARRNS----NSAQIGQA 61 + L AL+ RH+E ++ + L+ E+ R L +++ R R S QI Q Sbjct: 128 QILQEALQARHIEIEAFDDEAERLNVLIVEERRNL-VELQAARKIRKSYLIVFQKQIAQL 186 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKE 90 AE + + + + +++ Sbjct: 187 KAENKDEEATPAQEQMTKKSLKRRRDDED 215 >gi|124005680|ref|ZP_01690519.1| fels-1 prophage protease subunits of ATP-dependent proteases [Microscilla marina ATCC 23134] gi|123988748|gb|EAY28354.1| fels-1 prophage protease subunits of ATP-dependent proteases [Microscilla marina ATCC 23134] Length = 399 Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 33/95 (34%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 L + + + SLD K +E++ + ++ + ++LV+ E Sbjct: 276 GLRNEIKRLKSLDLKIESYKTNVENLENEKKRLHDEVAEMKKHEAIALVENAIKEGKIAP 335 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + ++ ++ ++ +P P I Sbjct: 336 VKKEKWLNHAYDNYDMVRDTLADMPTHPNLVNKIK 370 >gi|123497147|ref|XP_001327115.1| hypothetical protein [Trichomonas vaginalis G3] gi|121910040|gb|EAY14892.1| hypothetical protein TVAG_380020 [Trichomonas vaginalis G3] Length = 547 Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 23/183 (12%), Positives = 56/183 (30%), Gaps = 13/183 (7%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD + N + + ALK R + + K L ++IE ++ R++ + + Sbjct: 284 MLD--HVVDNDDDI-QALKDR-----IAQLEQMIGKIPGLQEEIERLKKERDALLDEKDK 335 Query: 61 AIAEGNLSLVD---ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 EG+ + + + L E ++E ++ ++L + E + Sbjct: 336 LFKEGSDEASKLHADMMAKKAQLSEDRAGYDQERIQLEEVDQRLREQYATIVEEFRRLND 395 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 + + + + + D + + G L Sbjct: 396 EKQKMAEEYRLIQARRT--KMHDQLNQLAKAHIDDPSELRAVFDLSQKFVLGDLNSKHAT 453 Query: 178 LGQ 180 + Sbjct: 454 IKN 456 >gi|301787331|ref|XP_002929086.1| PREDICTED: rab GTPase-binding effector protein 1-like [Ailuropoda melanoleuca] Length = 915 Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ + L++R E Q E +L+ + + + E +R+ +I + Sbjct: 200 RESADREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 257 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 258 AEDKVKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 317 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 318 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEMV 357 >gi|293374695|ref|ZP_06621003.1| proline--tRNA ligase [Turicibacter sanguinis PC909] gi|325840610|ref|ZP_08167091.1| proline--tRNA ligase [Turicibacter sp. HGF1] gi|292646609|gb|EFF64611.1| proline--tRNA ligase [Turicibacter sanguinis PC909] gi|325490259|gb|EGC92592.1| proline--tRNA ligase [Turicibacter sp. HGF1] Length = 420 Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 79/222 (35%), Gaps = 42/222 (18%) Query: 230 PTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI 289 PT E +T++ + K LPL + FR EA R G++R +F + S Sbjct: 108 PTHEEVITHVVRDFLNSYKKLPLTVYQIQTKFRDEA----RPRFGLMRGREFIMKDAYSF 163 Query: 290 -TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG-------------------- 328 +E + + I R L++R+V +G +G Sbjct: 164 HATQESLDEAYNNFVKAYTNIFTRCGLNFRMVEADSGQIGGSQSAEFMALAEVGEDTIVY 223 Query: 329 ------FSACKTYDLEVWLAGQN--------LYREISSCSTCGNFQSRRMNSRYRDPNSK 374 + + DLEV + E+ G S MN+ + D N K Sbjct: 224 STTGSFAANIEVADLEVGAPSPDGVGVVAHAKGIEVGHVFKLGTKYSEPMNAVFLDENQK 283 Query: 375 SLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 + G+ V R ++A++E + +G + P + P+ Sbjct: 284 KQPII--MGCYGIGVSRVMMAVIEQNNDENGMIW-PKGIAPF 322 >gi|190348482|gb|EDK40940.2| hypothetical protein PGUG_05038 [Meyerozyma guilliermondii ATCC 6260] Length = 802 Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 9/102 (8%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A L+ +S + I LD + + ++E +R + S + Sbjct: 324 IDLVDEACSTLRLQHESRPDAITQLDRQIMTIQIELESLRKEEDQLS-------VDRKNK 376 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 L + LK + + L+E E E+ + + Sbjct: 377 LEEELKAKQAELEEFTKQWESEKQSIDEVKNAKMELEQARFD 418 >gi|126313521|ref|XP_001362435.1| PREDICTED: similar to synaptonemal complex protein 1 [Monodelphis domestica] Length = 999 Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 38/105 (36%), Gaps = 3/105 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA- 63 +R + + LK+++ E +S + +E R + +I + + Sbjct: 571 NLLRDELDAVKEELKQKNEEVES-KLNESEENARSIENEILKKDKQIKILENKFNSLKKQ 629 Query: 64 -EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 E + L+ E LK++ K+ + + KL + + Sbjct: 630 MENKTKSFEELQQENKALKKKSIAENKQLNAYEIKINKLELELDD 674 >gi|73994204|ref|XP_534615.2| PREDICTED: similar to leucine rich repeat (in FLII) interacting protein 1 [Canis familiaris] Length = 748 Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 7/82 (8%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN---- 66 + ALK+R E E I L +K I++I D++ +IG + Sbjct: 470 FAEVKEALKQR--EEMLEEIRQLQQKQASYIREISDLQETIEWKDKKIGALERQKEFFDS 527 Query: 67 -LSLVDALKNETSTLKEQLPIL 87 S D L+ E LKE+L Sbjct: 528 IRSDRDDLREEVVMLKEELKKH 549 >gi|70998070|ref|XP_753767.1| myosin type II heavy chain [Aspergillus fumigatus Af293] gi|66851403|gb|EAL91729.1| myosin type II heavy chain, putative [Aspergillus fumigatus Af293] Length = 2405 Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 17/113 (15%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA---E 64 +++ E +L RH Q ++ R L + + +R+ R+ ++ E Sbjct: 1183 KEHLETEKASLSARHDNMQ--------KRLRELQAEADAMRSERSQLEREVADVKKLLEE 1234 Query: 65 GNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 +A L+ + LK QL + + S + + E Sbjct: 1235 KISEDAEAGESRKLLEQQIQDLKNQLFQAQADLSRERQSRDDVQMLAEHNLAE 1287 >gi|320031598|gb|EFW13558.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 322 Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 38/82 (46%), Gaps = 7/82 (8%) Query: 3 DIQWIRQ--NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +I+ +R+ N E + +++ + + ++++ L ++IE +RA + S ++ + Sbjct: 246 NIKALRKKQNEELAKYKIMEQYAKEDKDKADRAEKRSIQLQEEIEALRAESHELSKEMKK 305 Query: 61 AIAEGNLSLVDALKNETSTLKE 82 A L D E+ + E Sbjct: 306 A-----ADLADKAWKESESYAE 322 >gi|119187699|ref|XP_001244456.1| hypothetical protein CIMG_03897 [Coccidioides immitis RS] Length = 746 Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 6/109 (5%) Query: 12 EHLDIALK---KRHLEPQSEY--ILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEG 65 + + + KR + S + +L+ K L ++ I A++ +A+I + E Sbjct: 627 DEIQERIASPSKRGKDATSNKRSLATLERKEVKLNSQLNKIEAQQQKIAAKIELKRRKEL 686 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 LK E TLK+++ ++ E + + +S + + E Sbjct: 687 EKDERIRLKVEVETLKKEMDRMKVEISRLRQERGQWVSIVGKLQQENTE 735 >gi|255066457|ref|ZP_05318312.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256] gi|255049337|gb|EET44801.1| threonine--tRNA ligase [Neisseria sicca ATCC 29256] Length = 322 Score = 40.9 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 7/113 (6%) Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 ++++ + + LP+R R+E A G++R F + + E+ Sbjct: 22 VQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALH---GLMRVRGFVQDDAHIFCTEDQIV 78 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 +E I K+ H V L L D +VW + RE Sbjct: 79 SEARAFNELLVRIYKQFGFHDVSVKLS---LRPEKRAGSD-DVWDKAEQGLRE 127 >gi|254457971|ref|ZP_05071398.1| putative membrane protein [Campylobacterales bacterium GD 1] gi|207085364|gb|EDZ62649.1| putative membrane protein [Campylobacterales bacterium GD 1] Length = 393 Score = 40.9 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 38/112 (33%), Gaps = 10/112 (8%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 D+Q IR N E AL E + +K R L+ K++ R S QI Sbjct: 44 DLQTIRLNLEKEKSAL-----ELSESQLFEKKKKLRELVSKLQASREENMRLSMQISMLK 98 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 S D LKNE S L + + ++ L + + Sbjct: 99 -----SETDELKNEVSILNLDIKTKASKLTLSEKEMQLLKELLLENEEDANM 145 >gi|159126497|gb|EDP51613.1| myosin type II heavy chain, putative [Aspergillus fumigatus A1163] Length = 2405 Score = 40.9 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 17/113 (15%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA---E 64 +++ E +L RH Q ++ R L + + +R+ R+ ++ E Sbjct: 1183 KEHLETEKASLSARHDNMQ--------KRLRELQAEADAMRSERSQLEREVADVKKLLEE 1234 Query: 65 GNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 +A L+ + LK QL + + S + + E Sbjct: 1235 KISEDAEAGESRKLLEQQIQDLKNQLFQAQADLSRERQSRDDVQMLAEHNLAE 1287 >gi|302142065|emb|CBI19268.3| unnamed protein product [Vitis vinifera] Length = 1279 Score = 40.9 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 39/129 (30%), Gaps = 42/129 (32%) Query: 15 DIALKKRHLEPQS--------EYILSLDEKNRILIKKIEDIR------------------ 48 A KR + + +L L+++ + L K+IE++R Sbjct: 592 KEAEMKRFASADTSVLKLHYEKKLLELEQEKKALQKEIEELRHDLASISSTSDDGAQKLK 651 Query: 49 ----ARRNSNSAQIGQAIAE------------GNLSLVDALKNETSTLKEQLPILEKEEH 92 + N Q+ + + + L++E +K Q L+ + Sbjct: 652 EDYLQKLNVLEKQVSELKKKQDAQSQLLRQKQKSDEAAKRLQDEIQRIKSQKVQLQHKIK 711 Query: 93 EVCSSLKKL 101 + + Sbjct: 712 QESEQFRLW 720 >gi|62422036|gb|AAX82600.1| putative threonyl-tRNA synthetase [Lactobacillus reuteri] Length = 601 Score = 40.9 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 68/201 (33%), Gaps = 9/201 (4%) Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +D GA A + R + +++ID ++ G+ V P+L+ +A Sbjct: 203 NQLDLFFVDPKVGAGLPYWLPKGATIRRTIERYIIDREVAD-GHQHVYTPVLMNLDAYKT 261 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSLTNL-----YSHEIIESKSLPLRFTTLAPSFRS 263 +G + DDMF D + Y H I + LPLR L R Sbjct: 262 SGHWAHYRDDMFPPMDMGDGEMLESRPMNCPSHIQVYKHHIRSYRDLPLRIAELGMMHRY 321 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLC 323 E A G+ R + + + + +E ++L + + D+ L Sbjct: 322 EKSGALS---GLQRVREMTLNDGHTFVTLDQIRSEFAKILKLIMSVYEDFDITDYSFRLS 378 Query: 324 TGDLGFSACKTYDLEVWLAGQ 344 D + E+W Q Sbjct: 379 LRDPKNVKKYYANDEMWEKSQ 399 >gi|317152291|ref|YP_004120339.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2] gi|316942542|gb|ADU61593.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2] Length = 475 Score = 40.9 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 32/82 (39%), Gaps = 5/82 (6%) Query: 33 LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEH 92 ++ + R ++ + + ++A N+ + + ++L L+E+L + E Sbjct: 49 IEGERREIMAEQDSLKASINARQKRFDALK-----AEYESLLARERELQEELAAQDHELK 103 Query: 93 EVCSSLKKLISCIPNVPLEEVP 114 + +++ + E + Sbjct: 104 TIDGAIRTAAKQARDYFHESLT 125 >gi|71019463|ref|XP_759962.1| hypothetical protein UM03815.1 [Ustilago maydis 521] gi|46099508|gb|EAK84741.1| hypothetical protein UM03815.1 [Ustilago maydis 521] Length = 536 Score = 40.9 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 3/79 (3%) Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 ++ + LP+R+ +P R+EA A G+ R +F + + R + Sbjct: 193 CLIFGSSERSYRDLPIRYAEFSPLHRNEASGALT---GLTRVRRFHQDDAHVFCRPDQVA 249 Query: 297 TEHERMLSCAEEILKRLDL 315 E MLS Sbjct: 250 VEINSMLSMLTSAYDTFGF 268 >gi|148688256|gb|EDL20203.1| mCG20328, isoform CRA_a [Mus musculus] Length = 397 Score = 40.9 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 36/106 (33%), Gaps = 11/106 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQIGQAIAE 64 + + A +KR+ E ++++ R L ++ E + N + + E Sbjct: 296 KEQQEYMEAQEKRNKE-------NIEQLRRKLEQEREQLIKDHNMMVEKKLKEQKALLEE 348 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 G + + E LK + ++K++ K I Sbjct: 349 GFKKKAEEMDGEIQQLKHNIEDMKKKQWFHFRYYYKRSCFIYFFSH 394 >gi|255019144|ref|ZP_05291270.1| threonyl-tRNA synthetase [Listeria monocytogenes FSL F2-515] Length = 182 Score = 40.9 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 7/129 (5%) Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIE 246 GY V P++ E +G + +DMF T L P + +Y ++I Sbjct: 54 GYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNCPHHMMIYKNDIHS 113 Query: 247 SKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 + LP+R L R E A G+ R + R + E +R++ Sbjct: 114 YRELPIRIAELGMMHRYEMSGALS---GLQRVRGMTLNDAHVFVRPDQIKDEFKRVVELI 170 Query: 307 EEILKRLDL 315 E+ K D+ Sbjct: 171 LEVYKDFDI 179 >gi|226223890|ref|YP_002757997.1| DNA gyrase-like protein (subunit A) [Listeria monocytogenes Clip81459] gi|254824652|ref|ZP_05229653.1| DNA topoisomerase IV subunit A [Listeria monocytogenes FSL J1-194] gi|255520560|ref|ZP_05387797.1| DNA topoisomerase IV subunit A [Listeria monocytogenes FSL J1-175] gi|300765324|ref|ZP_07075308.1| DNA topoisomerase IV, A subunit [Listeria monocytogenes FSL N1-017] gi|225876352|emb|CAS05061.1| Putative DNA gyrase-like protein (subunit A) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293593890|gb|EFG01651.1| DNA topoisomerase IV subunit A [Listeria monocytogenes FSL J1-194] gi|300514007|gb|EFK41070.1| DNA topoisomerase IV, A subunit [Listeria monocytogenes FSL N1-017] Length = 819 Score = 40.9 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIR--QNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR ++ + L+ + E Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 448 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 479 >gi|224500821|ref|ZP_03669170.1| DNA topoisomerase IV subunit A [Listeria monocytogenes Finland 1988] Length = 819 Score = 40.9 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIR--QNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR ++ + L+ + E Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 448 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 479 >gi|217964570|ref|YP_002350248.1| DNA topoisomerase IV, A subunit [Listeria monocytogenes HCC23] gi|217333840|gb|ACK39634.1| DNA topoisomerase IV, A subunit [Listeria monocytogenes HCC23] gi|307570866|emb|CAR84045.1| DNA topoisomerase IV, A subunit [Listeria monocytogenes L99] Length = 819 Score = 40.9 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIR--QNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR ++ + L+ + E Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 448 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 479 >gi|319789067|ref|YP_004150700.1| chromosome segregation protein SMC [Thermovibrio ammonificans HB-1] gi|317113569|gb|ADU96059.1| chromosome segregation protein SMC [Thermovibrio ammonificans HB-1] Length = 1171 Score = 40.9 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 37/102 (36%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE--G 65 R+ + + +R + + L ++ + L+ + E++++ ++ E Sbjct: 741 RERAQENVESFNRRKALFE-NKLQELTKERKKLLSEQEELKSELMRLQERLDALKGELSE 799 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + L + +KE+ E+ V +++ + Sbjct: 800 LRTQRATLLEKLKAVKEKREAKERFLRTVQREIEEAERRVEQ 841 >gi|160946609|ref|ZP_02093812.1| hypothetical protein PEPMIC_00567 [Parvimonas micra ATCC 33270] gi|158446993|gb|EDP23988.1| hypothetical protein PEPMIC_00567 [Parvimonas micra ATCC 33270] Length = 809 Score = 40.9 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 7/85 (8%) Query: 4 IQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIK-KIEDIRARRNSNSAQIGQ 60 I+ IR + L +R + Q+E IL + + R L + E ++ NS +I + Sbjct: 394 IKIIRASYSDAQEKLMERFGFTKIQAESILEM--RLRRLQGLEREKLQDEYNSLIKEIAR 451 Query: 61 AIAEGNLSL--VDALKNETSTLKEQ 83 ++ +K E +KE+ Sbjct: 452 LKEILGNERLILNIIKEELIEIKEK 476 >gi|46907514|ref|YP_013903.1| DNA topoisomerase IV subunit A [Listeria monocytogenes serotype 4b str. F2365] gi|46880782|gb|AAT04080.1| DNA topoisomerase IV, A subunit [Listeria monocytogenes serotype 4b str. F2365] Length = 819 Score = 40.9 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIR--QNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR ++ + L+ + E Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 448 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 479 >gi|298246165|ref|ZP_06969971.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963] gi|297553646|gb|EFH87511.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963] Length = 864 Score = 40.9 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 12/89 (13%) Query: 1 MLDIQWIRQNP------EHLDIALKKRHLEPQSE--YILSLDEKNRILIKKIEDIRARRN 52 ML ++I + +D A R +E S I +LD + R L + E ++ + Sbjct: 374 MLSNRYITDRFLPDKAIDLIDEAASHRRVELDSTPTEIDALDRRIRQLQVEQEALKKETD 433 Query: 53 SNSAQIGQAIAEGNLSLVDALKNETSTLK 81 S + E + + L + +LK Sbjct: 434 PASRE----RRERVEADIANLNEQLRSLK 458 >gi|290894159|ref|ZP_06557130.1| parC protein [Listeria monocytogenes FSL J2-071] gi|290556289|gb|EFD89832.1| parC protein [Listeria monocytogenes FSL J2-071] Length = 819 Score = 40.9 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIR--QNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR ++ + L+ + E Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 448 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 479 >gi|254932396|ref|ZP_05265755.1| DNA topoisomerase IV subunit A [Listeria monocytogenes HPB2262] gi|293583952|gb|EFF95984.1| DNA topoisomerase IV subunit A [Listeria monocytogenes HPB2262] gi|328475130|gb|EGF45914.1| DNA topoisomerase IV subunit A [Listeria monocytogenes 220] gi|332311732|gb|EGJ24827.1| DNA topoisomerase 4 subunit A [Listeria monocytogenes str. Scott A] Length = 819 Score = 40.9 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIR--QNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR ++ + L+ + E Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 448 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 479 >gi|327399161|ref|YP_004340030.1| SMC domain-containing protein [Hippea maritima DSM 10411] gi|327181790|gb|AEA33971.1| SMC domain protein [Hippea maritima DSM 10411] Length = 510 Score = 40.9 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 8/95 (8%) Query: 9 QNPEHLDIAL-----KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 ++ + + L +R + I+ EK + LIK+ E + ++ +A Sbjct: 286 EDIDKIQARLFELEELQRKFSRTLDKIIEHAEKLKELIKEKERLVFELEDTRKRMDEAKK 345 Query: 64 EG-NLSLV--DALKNETSTLKEQLPILEKEEHEVC 95 + + + V K + LK ++ KE Sbjct: 346 QAIDKAEVLSSKRKEKAEKLKGEIVKYLKELMLDK 380 >gi|170053294|ref|XP_001862607.1| moesin/ezrin/radixin [Culex quinquefasciatus] gi|215275737|sp|B0WYY2|MOEH_CULQU RecName: Full=Moesin/ezrin/radixin homolog 1 gi|167873862|gb|EDS37245.1| moesin/ezrin/radixin [Culex quinquefasciatus] Length = 572 Score = 40.9 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 4/158 (2%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--IAE 64 IR E ++ + +L + I L+E+ + L +D+ R+N I + Sbjct: 340 IRNMQEEMERSQA--NLIEAQDMIRRLEEQLKQLQAAKDDLEQRQNELQVMITRLEETKN 397 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + L++E +E++ +++E S K+L + ++ + Sbjct: 398 MEAAERAKLEDEIRMKQEEVHKIQEEVSVKDSETKRLQEEVEEARRKQTEAAAALLAATT 457 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGA 162 S + E + G DF + Sbjct: 458 TPSHHHVEEEEEMDNEEELVNGENGNQDFSKDFDTDEH 495 >gi|307566391|ref|ZP_07628830.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] gi|307344968|gb|EFN90366.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] Length = 586 Score = 40.9 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 38/92 (41%), Gaps = 19/92 (20%) Query: 12 EHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRNS---------NSAQIG 59 + +KK R + +LD + L+ + E ++ N+ S++ G Sbjct: 501 DSFKNNIKKVAERGVS-------ALDNERNKLMHRYEKLKQEINTYENNLGFLNISSKKG 553 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 ++ + ++ LK + +K+++ ++ E Sbjct: 554 NSLIDEMNRRIERLKADVEEIKQKIKAIDAEN 585 >gi|224045276|ref|XP_002192143.1| PREDICTED: similar to nuclear factor (erythroid-derived 2)-like 3 [Taeniopygia guttata] Length = 714 Score = 40.9 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ++ IR +N +KR + IL+L+E L + E ++ + S I Q Sbjct: 602 LRDIRRRGKNK-VAAQKCRKR----KLNAILNLEEDVCNLQTQKESLKKEHSQCSKSINQ 656 Query: 61 AIAE 64 + Sbjct: 657 IKQK 660 >gi|123475289|ref|XP_001320823.1| hypothetical protein [Trichomonas vaginalis G3] gi|121903636|gb|EAY08600.1| hypothetical protein TVAG_191230 [Trichomonas vaginalis G3] Length = 1840 Score = 40.9 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 48/127 (37%), Gaps = 21/127 (16%) Query: 1 MLDIQWIRQNPE--HLDIALKKRHLEPQSE------------YILSLDEKNRILIKKIED 46 ML ++ I+++ E + L + + + + LD+K R ++ +++ Sbjct: 1415 MLQLKKIKESIESSFIIQHLTSENYKSEVSISISSLYFDKICELNKLDQKRREILHTMDE 1474 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 I +I + SLV + E K + + +++ ++ ++ + + Sbjct: 1475 TNNE-------IASSIRKEFDSLVQDISKEVEHEKSKFVMRKRKTYQCILNILQKPHSLD 1527 Query: 107 NVPLEEV 113 N + Sbjct: 1528 NDYHKST 1534 >gi|14600971|ref|NP_147497.1| hypothetical protein APE_0790 [Aeropyrum pernix K1] gi|5104453|dbj|BAA79768.1| conserved hypothetical protein [Aeropyrum pernix K1] Length = 297 Score = 40.9 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 2/74 (2%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ--AIAEGNLSLVDALKNETSTLKEQLP 85 E I+ L E+ R LI +++ +R R S + + + +E + LKE+ Sbjct: 25 EEIVRLKEERRKLINEVKALREERRKASREKREYVEKLRSLREERKKILDELAQLKEERK 84 Query: 86 ILEKEEHEVCSSLK 99 E L+ Sbjct: 85 KTRDELVIKRDQLR 98 >gi|322707504|gb|EFY99082.1| threonyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23] Length = 563 Score = 40.9 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 59/178 (33%), Gaps = 32/178 (17%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + + A + L F+ + +G+ EV P + + +G + +ADDM+ Sbjct: 130 SPGSPIFLPNGARIFNRLIDFIRKQYA-RYGFQEVITPTIYKKALWAKSGHLENYADDMY 188 Query: 221 CT----------------------------TDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 + L P + +++ + + LP+ Sbjct: 189 TVTGNTSTPDKDGGGCCGGDHGPAEPDLEADNEYGLKPMNCPGHCLIFASRVHSYRELPV 248 Query: 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 R+ +P R+E A G+ R +F + + R E ++ L + + Sbjct: 249 RYADFSPLHRNEISGALS---GLTRVRRFHQDDGHIFCRPSQVEEEIKKTLDFVKVVY 303 >gi|16803327|ref|NP_464812.1| DNA topoisomerase IV subunit A [Listeria monocytogenes EGD-e] gi|224501768|ref|ZP_03670075.1| DNA topoisomerase IV subunit A [Listeria monocytogenes FSL R2-561] gi|254829956|ref|ZP_05234611.1| DNA topoisomerase IV subunit A [Listeria monocytogenes 10403S] gi|284801672|ref|YP_003413537.1| DNA topoisomerase IV subunit A [Listeria monocytogenes 08-5578] gi|284994814|ref|YP_003416582.1| DNA topoisomerase IV subunit A [Listeria monocytogenes 08-5923] gi|16410703|emb|CAC99365.1| parC [Listeria monocytogenes EGD-e] gi|21328243|gb|AAM48489.1| DNA topoisomerase IV subunit A [Listeria monocytogenes] gi|284057234|gb|ADB68175.1| DNA topoisomerase IV subunit A [Listeria monocytogenes 08-5578] gi|284060281|gb|ADB71220.1| DNA topoisomerase IV subunit A [Listeria monocytogenes 08-5923] Length = 819 Score = 40.9 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIR--QNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR ++ + L+ + E Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 448 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 479 >gi|150865547|ref|XP_001384811.2| hypothetical protein PICST_32134 [Scheffersomyces stipitis CBS 6054] gi|149386803|gb|ABN66782.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 575 Score = 40.9 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 17/146 (11%), Positives = 46/146 (31%), Gaps = 4/146 (2%) Query: 4 IQWIRQN----PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 + I ++ E + K++ + +L E + ++ +R R A++ Sbjct: 108 LNHIEEDVANKAEAVKENAKRKRTKKIGNQKKALHETKEEVEREKIALRERIKKEQAELR 167 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + I + ++ E + L+EQL + +V + + P + + Sbjct: 168 EQIEKEQAEKKKQIEREQAELREQLAREQATLKDVKQYHRDVYELKHIFPDHDFEVLNQQ 227 Query: 120 NENILIRSVGKKPSAIHLSREHFEIG 145 + + E + Sbjct: 228 LQLSNGDIEVAIHKLLEGVPEKYVPP 253 >gi|124004284|ref|ZP_01689130.1| Clp protease domain protein [Microscilla marina ATCC 23134] gi|123990354|gb|EAY29853.1| Clp protease domain protein [Microscilla marina ATCC 23134] Length = 425 Score = 40.9 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 33/95 (34%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 L + + + SLD K +E++ + ++ + ++LV+ E Sbjct: 276 GLRNEIKRLKSLDLKIESYKTNVENLENEKKRLHDEVAEMKKHEAIALVENAIKEGKIAP 335 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + ++ ++ ++ +P P I Sbjct: 336 VKKEKWLNHAYDNYDMVRDTLADMPTHPNLVNKIK 370 >gi|124002916|ref|ZP_01687767.1| Clp protease domain protein [Microscilla marina ATCC 23134] gi|123991566|gb|EAY30974.1| Clp protease domain protein [Microscilla marina ATCC 23134] Length = 425 Score = 40.9 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 33/95 (34%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 L + + + SLD K +E++ + ++ + ++LV+ E Sbjct: 276 GLRNEIKRLKSLDLKIESYKTNVENLENEKKRLHDEVAEMKKHEAIALVENAIKEGKIAP 335 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + ++ ++ ++ +P P I Sbjct: 336 VKKEKWLNHAYDNYDMVRDTLADMPTHPNLVNKIK 370 >gi|47097247|ref|ZP_00234808.1| DNA topoisomerase IV, A subunit [Listeria monocytogenes str. 1/2a F6854] gi|254898548|ref|ZP_05258472.1| DNA topoisomerase IV subunit A [Listeria monocytogenes J0161] gi|254911961|ref|ZP_05261973.1| DNA topoisomerase IV [Listeria monocytogenes J2818] gi|254936288|ref|ZP_05267985.1| DNA topoisomerase IV [Listeria monocytogenes F6900] gi|47014372|gb|EAL05344.1| DNA topoisomerase IV, A subunit [Listeria monocytogenes str. 1/2a F6854] gi|258608878|gb|EEW21486.1| DNA topoisomerase IV [Listeria monocytogenes F6900] gi|293589924|gb|EFF98258.1| DNA topoisomerase IV [Listeria monocytogenes J2818] Length = 819 Score = 40.9 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIR--QNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR ++ + L+ + E Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 448 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 479 >gi|256076493|ref|XP_002574546.1| glutamyl-tRNA synthetase cytoplasmic (glutamate--tRNA ligase) (glurs) [Schistosoma mansoni] gi|238659754|emb|CAZ30779.1| glutamyl-tRNA synthetase, cytoplasmic (glutamate--tRNA ligase) (glurs), putative [Schistosoma mansoni] Length = 1306 Score = 40.9 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 112/374 (29%), Gaps = 24/374 (6%) Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ A+ S + L+ + + S+ + C P+ I + Sbjct: 719 GKLKAKQQQSSENKLRTTVVGHETINKPTSDKLMYKQSNQSDSVKCEQLKPVSPKVIVKN 778 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK-----LSGARFSVLTGHLAH 173 + + + L+ E + K + A+ Sbjct: 779 EKQKESLLKMSGTKKQSKLAIEA-SKETDFSDWYSELIIKSELLDYYDISGCYILRPWAY 837 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT-GQIPKFADDMFCTTDGRW----- 227 Q +D G P+ V A+ + FA ++ T Sbjct: 838 HMWQSIQCFMDEKLKVMGIENAYFPMFVSKSALEREKNHVTDFAPEVAWVTKSGDTDLAE 897 Query: 228 ---LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + PTSE + +++ I + LPLR + R E + + LR +F Sbjct: 898 PIAIRPTSETIMYPIFAKWIQSHRDLPLRINQWSNVVRWE----FKHPQPFLRTREFLWQ 953 Query: 285 ELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 E + + + AE L + + A T +E+++ Sbjct: 954 EGHTAFAEKADAEAEVRVILDLYAEVYEYLLAVPVVKGRKTEREKFAGADYTTTVEIYID 1013 Query: 343 GQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 G + ++ G SR + Y P + + + N G+ R L ++ + + Sbjct: 1014 GNGRAIQGATSHHLGQNFSRMFDVTYDHPVTGKPAYVYQ-NSWGL-TTRTLGVLIMVHSD 1071 Query: 403 ADGSVTIPTVLRPY 416 G V P V PY Sbjct: 1072 DKGLVLPPRV-APY 1084 >gi|256076491|ref|XP_002574545.1| glutamyl-tRNA synthetase cytoplasmic (glutamate--tRNA ligase) (glurs) [Schistosoma mansoni] gi|238659753|emb|CAZ30778.1| glutamyl-tRNA synthetase, cytoplasmic (glutamate--tRNA ligase) (glurs), putative [Schistosoma mansoni] Length = 1346 Score = 40.9 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 112/374 (29%), Gaps = 24/374 (6%) Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 G+ A+ S + L+ + + S+ + C P+ I + Sbjct: 759 GKLKAKQQQSSENKLRTTVVGHETINKPTSDKLMYKQSNQSDSVKCEQLKPVSPKVIVKN 818 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK-----LSGARFSVLTGHLAH 173 + + + L+ E + K + A+ Sbjct: 819 EKQKESLLKMSGTKKQSKLAIEA-SKETDFSDWYSELIIKSELLDYYDISGCYILRPWAY 877 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT-GQIPKFADDMFCTTDGRW----- 227 Q +D G P+ V A+ + FA ++ T Sbjct: 878 HMWQSIQCFMDEKLKVMGIENAYFPMFVSKSALEREKNHVTDFAPEVAWVTKSGDTDLAE 937 Query: 228 ---LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKC 284 + PTSE + +++ I + LPLR + R E + + LR +F Sbjct: 938 PIAIRPTSETIMYPIFAKWIQSHRDLPLRINQWSNVVRWE----FKHPQPFLRTREFLWQ 993 Query: 285 ELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLA 342 E + + + AE L + + A T +E+++ Sbjct: 994 EGHTAFAEKADAEAEVRVILDLYAEVYEYLLAVPVVKGRKTEREKFAGADYTTTVEIYID 1053 Query: 343 GQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLN 402 G + ++ G SR + Y P + + + N G+ R L ++ + + Sbjct: 1054 GNGRAIQGATSHHLGQNFSRMFDVTYDHPVTGKPAYVYQ-NSWGL-TTRTLGVLIMVHSD 1111 Query: 403 ADGSVTIPTVLRPY 416 G V P V PY Sbjct: 1112 DKGLVLPPRV-APY 1124 >gi|242007443|ref|XP_002424549.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212507992|gb|EEB11811.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 2452 Score = 40.9 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 16/165 (9%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDI----------RARRNSNSAQI 58 + E LKK + S+ L K+ L++KI+ + R R+ +I Sbjct: 1267 KQLEEAKENLKK--AQETSDASLKASAKHAELLRKIDTLNAITDSNRILREERDKLQKEI 1324 Query: 59 GQAIAEGNLSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP--LEEVP 114 E + + LK + L E++ L E + L K E Sbjct: 1325 KCLKEEVEKAESALAPLKADIKKLNEKVETLTAENQALLMDLAKWKQRAEKSTKGTPEDW 1384 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + L + + + + + + ++ ++ Sbjct: 1385 KRLTNERENLAKQWQLEKNINEKLEDELKKVKQEKTSLNEQLVQI 1429 >gi|149728368|ref|XP_001498719.1| PREDICTED: TATA element modulatory factor 1 [Equus caballus] Length = 1095 Score = 40.9 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 8 RQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++ +++ L R + ++ + DE+ + L+++ E + ++ NS I + A+ Sbjct: 527 KKEIKNMKEELATRLNSSETADLLKEKDEQIQGLMEEGEKLSKQQLQNSNIIKKLRAKDK 586 Query: 67 LSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + + L + L+E+L L++ K+ I Sbjct: 587 ENENIIAKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIK 628 >gi|70953193|ref|XP_745713.1| prolyl-t-RNA synthase [Plasmodium chabaudi chabaudi] gi|56526123|emb|CAH76923.1| prolyl-t-RNA synthase, putative [Plasmodium chabaudi chabaudi] Length = 498 Score = 40.9 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 88/242 (36%), Gaps = 17/242 (7%) Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L + V + + G KF DD + S ++L Sbjct: 83 LWNISDRSKLYSEEFLYVYKQKQQKVDTDIGESVKKKFEDDGNILSP---TCEESALTLI 139 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + K PL FR+E R + + + +F + S E Sbjct: 140 NEIYNLNATEKHFPLLIHQYNYKFRNEK----RLEKSLFKSKEFLMKDGYSFHTNEKCMN 195 Query: 298 EHERMLS-CAEEILKRLDLHYRVVSLCTGD-LGFSACKTYDLEVWLAGQNLYREISSCST 355 E + C I +L L Y ++ D + Y + ++E + Sbjct: 196 EIYEIYKECYNNIFNKLGLKYNIIKKRKKDKMNALESHEYQILC---RDGKFKEGAHTFK 252 Query: 356 CGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSVTIPTVLR 414 G++ S++++ + + ++ K+ + GS G+ + R L +++N+ + DG + +P+ + Sbjct: 253 LGDYYSKKLDIHFLNKRNEK-KYIYM--GSYGIGINRLLYFLIDNFYDDDG-IKLPSPIA 308 Query: 415 PY 416 P+ Sbjct: 309 PF 310 >gi|158285521|ref|XP_308355.3| AGAP007523-PB [Anopheles gambiae str. PEST] gi|157020032|gb|EAA45415.3| AGAP007523-PB [Anopheles gambiae str. PEST] Length = 2003 Score = 40.9 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R L+ E I L+ K + L +++++ + + + + S + LK + Sbjct: 1527 TRELDEAFEKIDELETKRKGLQNELDELANTQGTADKNVHELEKAKRALESQLAELKAQN 1586 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L + Sbjct: 1587 EELEDDLQLTEDAKLRLEVNMQALRAQFE 1615 >gi|220930253|ref|YP_002507162.1| methyl-accepting chemotaxis sensory transducer [Clostridium cellulolyticum H10] gi|220000581|gb|ACL77182.1| methyl-accepting chemotaxis sensory transducer [Clostridium cellulolyticum H10] Length = 494 Score = 40.9 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 46/119 (38%), Gaps = 6/119 (5%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA--RRNSN--SAQIGQAIA--E 64 E + +E + L E++ L +IE I RN+ + +I + + Sbjct: 337 IEAARAGEAGKGFSVVAEEVRKLAEESNNLTHQIESILKEMERNALDVTMEIVKEKSYIN 396 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 + S + KN + +KE++ +E + + + + L E + I + +N Sbjct: 397 NSKSATEQTKNIFNLIKEEIHSIETKNNNIKETAYDLHKSFELTDDEVIAISNNTEKNA 455 >gi|11276938|pir||T47177 hypothetical protein DKFZp762H157.1 - human (fragment) gi|7328175|emb|CAB82418.1| hypothetical protein [Homo sapiens] Length = 630 Score = 40.9 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 395 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 454 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 455 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 499 >gi|124009662|ref|ZP_01694334.1| Clp protease domain protein [Microscilla marina ATCC 23134] gi|123984712|gb|EAY24697.1| Clp protease domain protein [Microscilla marina ATCC 23134] Length = 429 Score = 40.9 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 32/89 (35%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 L + + + SLD K +E++ + ++ + ++LV+ E Sbjct: 279 GLRNEIKRLKSLDLKIESYKTNVENLENEKKRLHDEVAEMKKHEAIALVENAIKEGKIAP 338 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + ++ ++ ++ +P P Sbjct: 339 VKKEKWLNHAYDNYDMVRDTLADMPTHPN 367 >gi|325288991|ref|YP_004265172.1| putative cytoplasmic protein [Syntrophobotulus glycolicus DSM 8271] gi|324964392|gb|ADY55171.1| putative cytoplasmic protein [Syntrophobotulus glycolicus DSM 8271] Length = 1134 Score = 40.9 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%) Query: 25 PQSEYILSLDEKNRILIKKIEDIRARRNSNSA---QIGQAIAEGNLSLVDALKNETSTLK 81 S I L+++ R+ + + E A++ +I +AI ++ALK E ++L+ Sbjct: 309 LLSAEITGLEQELRLAVGEREQAEAKQKEIEKNIEEIRRAIYANGGEALEALKTEINSLR 368 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVP 109 E L K+ +KL + P Sbjct: 369 EILQHTRKDRAVYMVHAEKLNLPAADTP 396 >gi|284991611|ref|YP_003410165.1| threonyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] gi|284064856|gb|ADB75794.1| threonyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] Length = 690 Score = 40.9 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 66/231 (28%), Gaps = 23/231 (9%) Query: 140 EHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 E + +D G+ +V + R + + H E GY+ V+ P Sbjct: 262 ERRDHRRLGAELDLFSFPDEIGSGLAVFHPKGGVVRREMEDYSRRRH-EEAGYSFVNTPH 320 Query: 200 LVRDEAMYGTGQIPKFADDMFCTTD----------------GRWLIPTSEVSLTNLYSHE 243 + + + +G + +A+ M+ +L P + ++ Sbjct: 321 ITKGQLFQTSGHLEWYAEGMYPAMHLDEERDAEGKVRRQGQDYYLKPMNCPVHNLVFRSR 380 Query: 244 IIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERML 303 K LPLR +R E G+ R F + + E + Sbjct: 381 GRSYKELPLRLFEFGTVYRYEKSG---VVHGLTRARGFTQDDAHIYCTPE---QMQGEIR 434 Query: 304 SCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCS 354 S + +L L + E W + RE + S Sbjct: 435 SLLQFVLDLLADYGLEDFYLELSTRNPEKSIGSDEDWERATDALREAAEAS 485 >gi|124009870|ref|ZP_01694537.1| Clp protease domain protein [Microscilla marina ATCC 23134] gi|123984106|gb|EAY24472.1| Clp protease domain protein [Microscilla marina ATCC 23134] Length = 425 Score = 40.9 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 32/89 (35%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 L + + + SLD K +E++ + ++ + ++LV+ E Sbjct: 276 GLRNEIKRLKSLDLKIESYKTNVENLENEKKRLHDEVAEMKKHEAIALVENAIKEGKIAP 335 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + ++ ++ ++ +P P Sbjct: 336 VKKEKWLNHAYDNYDMVRDTLADMPTHPN 364 >gi|108863044|gb|ABA99633.2| RecF/RecN/SMC N terminal domain containing protein, expressed [Oryza sativa Japonica Group] Length = 573 Score = 40.9 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 20/105 (19%) Query: 23 LEPQSEYIL-SLDEKNRILIKKIED-------IRARRNSNS----------AQIGQAIAE 64 +E +E I L+E R L + +E+ + A++ S I + E Sbjct: 247 IEKDAEKIEAELEEDRRSLQQVLEENQSSDYELSAKKKEQSGFLKKMTLCEKSIAKKKLE 306 Query: 65 --GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + LK + S LK ++ KE + KK + + + Sbjct: 307 LDKKQPELLRLKEQISRLKSKIKSCNKEIDKKKDDSKKHLEEMKS 351 >gi|291522457|emb|CBK80750.1| glycyl-tRNA synthetase, dimeric type [Coprococcus catus GD/7] Length = 465 Score = 40.9 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 72/233 (30%), Gaps = 18/233 (7%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 + F+ + + + + + + M+ T Q +D T T+ Sbjct: 121 WSNEQMVNFIDEKNICCPTCGKHNFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPETA 176 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + + K +P + SFR+E R +F + EL Sbjct: 177 QGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCEP 232 Query: 293 EDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + L+ L + RV +L F + T D+E + E Sbjct: 233 DTDLEWFAYWKEFCINWLQTLGIKPDEMRVRDHEAEELSFYSKATSDIEFLFPF--GWGE 290 Query: 350 ISSCSTCGNFQ-SRRMNSRYRD----PNSKSLKFTHTLNGSGVAVGRCLIAIL 397 + + N+ SR M D K K+ + + R ++A L Sbjct: 291 LWGIADRTNYDLSRHMEVSGEDLTYFDEGKKEKYIPFVIEPSLGADRVVLAFL 343 >gi|241204909|ref|YP_002976005.1| tRNA synthetase class II (G H P and S) [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858799|gb|ACS56466.1| tRNA synthetase class II (G H P and S) [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 278 Score = 40.9 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 11/137 (8%) Query: 235 SLTNLYSHEIIESKS---LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 T +Y I+ + S LPL S+R E + +R +FW+ E Sbjct: 118 PSTYIYMQHILGNHSKTWLPLCVWQAGRSYRREQEQPTKH----MRLKEFWQLEFQCAFT 173 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 + H L ++ L +H + + L + T D+EV + + E+ Sbjct: 174 ADSGNDYHAACLEPVRRMIASL-IHLPTRIVPSDRLPAYSEVTVDIEV--DNGDKWMEVC 230 Query: 352 SCSTCGNF-QSRRMNSR 367 S S +F Q R R Sbjct: 231 SISRRTDFPQRYRSQPR 247 >gi|282895642|ref|ZP_06303767.1| ABC-transporter DevB family protein [Raphidiopsis brookii D9] gi|281199336|gb|EFA74201.1| ABC-transporter DevB family protein [Raphidiopsis brookii D9] Length = 419 Score = 40.9 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 10/92 (10%), Positives = 34/92 (36%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 + ++ L + ++ I+++ + L +E + + N A++ Q + + Sbjct: 71 DRVEKILLQEGDVVKAGQIIAILDSRNKLQSAVERAQKQVNVAQAKLEQIKSGAKPGEIQ 130 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + K LK + + + + ++ Sbjct: 131 SQKANVEKLKAEYEGNKNAYIQTIARIEAQWQ 162 >gi|302832301|ref|XP_002947715.1| hypothetical protein VOLCADRAFT_57497 [Volvox carteri f. nagariensis] gi|300267063|gb|EFJ51248.1| hypothetical protein VOLCADRAFT_57497 [Volvox carteri f. nagariensis] Length = 937 Score = 40.9 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A ++ S E + +L+ + L + + R++ S + +A + Sbjct: 396 IDLVDEACANMRVQLDSKPEQLDALERQRIRLQVEAAALAKERDALSKKRAAEVARELAA 455 Query: 69 LVDALK 74 L D L+ Sbjct: 456 LEDELR 461 >gi|168056374|ref|XP_001780195.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668345|gb|EDQ54954.1| predicted protein [Physcomitrella patens subsp. patens] Length = 766 Score = 40.9 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 13/95 (13%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG------- 59 IR + + +K + E I L + R L +I +RA + ++I Sbjct: 30 IRATEQEIRAKEEK--FRAKEEEIRELRAEIRELKAEISKLRAEIRAVESEIATASGDQA 87 Query: 60 ----QAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 +A + + +LK++ S L +Q+ +++ Sbjct: 88 TKPLEAKLQFQRQQIVSLKSQVSRLGQQISSRDQQ 122 >gi|145613850|ref|XP_363396.2| hypothetical protein MGG_01322 [Magnaporthe oryzae 70-15] gi|145020862|gb|EDK04991.1| hypothetical protein MGG_01322 [Magnaporthe oryzae 70-15] Length = 367 Score = 40.9 bits (94), Expect = 0.46, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 4/108 (3%) Query: 209 TGQIPKFADDMFCTTDGRWLIPTSEVSL-TNLYSHEIIESKSLPLRFTTLAPSFRSEAGS 267 T P AD + + +++ ++ + LP+R+ +P R+E Sbjct: 5 TSTSPSRADSTGDAEADEYGLKPMNCPGHCLIFASQLRSYRDLPIRYADFSPLHRNEVSG 64 Query: 268 AGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A G+ R +F + + R E + LS + L L Sbjct: 65 ALS---GLTRVRRFHQDDGHIFCRPSQIEEEIRQTLSFVKTTYDTLKL 109 >gi|124487689|gb|ABN11932.1| putative moesin-like protein [Maconellicoccus hirsutus] Length = 226 Score = 40.5 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 40/119 (33%), Gaps = 9/119 (7%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSN---------SAQIGQAIAEGNLSLVDALKNETS 78 + I L+E+ R L +++ AR+N S + A + ++E Sbjct: 17 DIIRRLEEQLRQLQSAKDELEARQNELQTMMERLEESKNMEAAERAKLEEEIKDKQSEVE 76 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL 137 ++ ++ + ++E + ++ + ++ + + + + Sbjct: 77 RIRNEVEVKDQETRRLQDEVEAARQKQEEAKAALLAATSTPQHHHVEENENCDEHDDEM 135 >gi|265750305|ref|ZP_06086368.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263237201|gb|EEZ22651.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 1217 Score = 40.5 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 23/213 (10%), Positives = 56/213 (26%), Gaps = 17/213 (7%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYI----LSLDEKNRILIKKIEDIRARRNSNSAQIG 59 + +I++N + K + + I DE+ R+L ++ E +RA +S +I Sbjct: 790 LSFIKENATLVIEYQKDKR--DLIDRIPGWQREHDEQKRLLQQERETLRAETSSLQEKID 847 Query: 60 QAIAEGNLSLVD--ALKNETSTLKEQL-----PILEKEEHEVCSSLKKLISCIPNVPLEE 112 E + + L+ + + H + + + E Sbjct: 848 LLNKELEEAEENVRELQKNLEAYSKISAYDWYKPHQDIFHSETAQTIQTTKTCMELIDEL 907 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 + H ++ D++ V + Sbjct: 908 TRQANQFTQVQSKLRKEVNLFTGHFDEDNTFKFRVKFNEDWEYVRFADELHDFVEENRID 967 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEA 205 + + + H + +L E Sbjct: 968 EY----IRRINNEHWDTFKRISMDTSMLTSSED 996 >gi|212695063|ref|ZP_03303191.1| hypothetical protein BACDOR_04601 [Bacteroides dorei DSM 17855] gi|212662379|gb|EEB22953.1| hypothetical protein BACDOR_04601 [Bacteroides dorei DSM 17855] Length = 1217 Score = 40.5 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 23/213 (10%), Positives = 56/213 (26%), Gaps = 17/213 (7%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYI----LSLDEKNRILIKKIEDIRARRNSNSAQIG 59 + +I++N + K + + I DE+ R+L ++ E +RA +S +I Sbjct: 790 LSFIKENATLVIEYQKDKR--DLIDRIPGWQREHDEQKRLLQQERETLRAETSSLQEKID 847 Query: 60 QAIAEGNLSLVD--ALKNETSTLKEQL-----PILEKEEHEVCSSLKKLISCIPNVPLEE 112 E + + L+ + + H + + + E Sbjct: 848 LLNKELEEAEENVRELQKNLEAYSKISAYDWYKPHQDIFHSETAQTIQTTKTCMELIDEL 907 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 + H ++ D++ V + Sbjct: 908 TRQANQFTQVQSKLRKEVNLFTGHFDEDNTFKFRVKFNEDWEYVRFADELHDFVEENRID 967 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEA 205 + + + H + +L E Sbjct: 968 EY----IRRINNEHWDTFKRISMDTSMLTSSED 996 >gi|118085086|ref|XP_417152.2| PREDICTED: similar to centromere protein J [Gallus gallus] Length = 1227 Score = 40.5 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 39/100 (39%), Gaps = 7/100 (7%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDE--KNRILIKKIEDIRARRNSNSA---QIGQA 61 +R+ EH +++K + Q + L E + R K+++ ++ R + Sbjct: 825 LREEREHALASIRKEIADFQQQKAQELAEIEEYRK--KEMKKLQKERKVFEKYTIEARAI 882 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 + + ALK + + L+E L E + LK Sbjct: 883 PDKKERDEIQALKQQIAELQEDLKRKEAKWSTTHRRLKDQ 922 >gi|73981323|ref|XP_860781.1| PREDICTED: similar to threonyl-tRNA synthetase-like 1 isoform 5 [Canis familiaris] Length = 636 Score = 40.5 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 25/183 (13%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN---------- 238 G++EV P L + +G + +DMF S +S+ + Sbjct: 263 RRGFSEVKTPTLFSAKLWELSGHWEHYQEDMFVLQPPGSDRLASSLSVCSTSHSTDTLAL 322 Query: 239 ----------LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 +++H + LPLR R+EA + G+ R F + + Sbjct: 323 KPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRAEASGSL---GGLTRLRCFQQDDAHI 379 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYR--VVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + E + L + L +R + + +G LG S +V Sbjct: 380 FCAPDQLEEEIQGCLDFLRSVYAVLGFSFRLALSTRPSGFLGESCLWDQAEQVLQRALEE 439 Query: 347 YRE 349 + E Sbjct: 440 FGE 442 >gi|150016362|ref|YP_001308616.1| hypothetical protein Cbei_1482 [Clostridium beijerinckii NCIMB 8052] gi|149902827|gb|ABR33660.1| protein of unknown function DUF1432 [Clostridium beijerinckii NCIMB 8052] Length = 328 Score = 40.5 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 8/80 (10%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKN----RILIKKIEDIRARRNSNSAQIG 59 + + +NP+ + + + L+ + ILS+D + R + +++ ++A I Sbjct: 188 KIVLENPDAISKTVLNKGLDAGTAFEILSIDIADVDVGRNIGAQLQTLQAE---ADKNIA 244 Query: 60 QAIAEGNLSLVDALKNETST 79 QA AE ++ A + E Sbjct: 245 QAKAEERRAMAVAKEQEMRA 264 >gi|295133940|ref|YP_003584616.1| SPFH domain / Band 7 family protein [Zunongwangia profunda SM-A87] gi|294981955|gb|ADF52420.1| SPFH domain / Band 7 family protein [Zunongwangia profunda SM-A87] Length = 692 Score = 40.5 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 9/112 (8%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA-QIGQAIAEGNLS----- 68 L KR E + I D + R I +++ A + +I A N Sbjct: 215 KANLIKRDEE---KTIRKQDVEAREAILELDKQLAEKEEAQKREIANIKARENAEVSKVA 271 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + LK+ET+ + + + EE+ + + +E + Sbjct: 272 EEERLKSETARIATEEKVKVAEENMNRQIIVAAKNKERTEAVESERVEKDRM 323 >gi|158285519|ref|XP_001687903.1| AGAP007523-PA [Anopheles gambiae str. PEST] gi|157020031|gb|EDO64552.1| AGAP007523-PA [Anopheles gambiae str. PEST] Length = 1974 Score = 40.5 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R L+ E I L+ K + L +++++ + + + + S + LK + Sbjct: 1527 TRELDEAFEKIDELETKRKGLQNELDELANTQGTADKNVHELEKAKRALESQLAELKAQN 1586 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L + Sbjct: 1587 EELEDDLQLTEDAKLRLEVNMQALRAQFE 1615 >gi|302345770|ref|YP_003814123.1| hypothetical protein HMPREF0659_A6055 [Prevotella melaninogenica ATCC 25845] gi|302149595|gb|ADK95857.1| conserved hypothetical protein [Prevotella melaninogenica ATCC 25845] Length = 628 Score = 40.5 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 43/96 (44%), Gaps = 19/96 (19%) Query: 8 RQNPEHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRNS---------NS 55 R+ ++ LKK R ++ +LD + L+++ E ++ N+ S Sbjct: 539 RKRVDNFRNNLKKVADRGID-------ALDNERGRLLRRFEQLKQEVNTYENNLGFLNIS 591 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 ++ G ++ + + LK++ +K+++ ++ E Sbjct: 592 SKKGNSLIDEMNRRIQKLKDDMDEVKQKIKAIDAEN 627 >gi|222445726|ref|ZP_03608241.1| hypothetical protein METSMIALI_01368 [Methanobrevibacter smithii DSM 2375] gi|222435291|gb|EEE42456.1| hypothetical protein METSMIALI_01368 [Methanobrevibacter smithii DSM 2375] Length = 529 Score = 40.5 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 22/196 (11%), Positives = 54/196 (27%), Gaps = 12/196 (6%) Query: 8 RQNPEHLDIALKK-RH-----LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 R+ + +K R L+ + + + KK+E+ + RN + +I Sbjct: 276 REEFNRIAKEQRKIRDELNASLKENLNKAIEFRNERNEINKKVEEAKKARNEANNKIRNL 335 Query: 62 IAEGNLSLVDALKNETSTLKEQLPIL--EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 ++NE + + + + ++ + E+ + A Sbjct: 336 EWSSGKRDKIKIENEIKKIDKIIETRVLDIKKENQLVKNANDLRKQLMEIHEDESVKGEA 395 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLM----DFDRATKLSGARFSVLTGHLAHLE 175 E + + + E L D A + +F + + Sbjct: 396 QELKKLSEEEHEKVIDFSEKAQAAHEEMLKFFRKTDDIRTAADEAHKKFIEARKNASAKH 455 Query: 176 RALGQFMIDLHTSEHG 191 + D+H Sbjct: 456 EEFKSILSDIHVINKK 471 >gi|261349726|ref|ZP_05975143.1| putative phosphoserine phosphatase [Methanobrevibacter smithii DSM 2374] gi|288861681|gb|EFC93979.1| putative phosphoserine phosphatase [Methanobrevibacter smithii DSM 2374] Length = 529 Score = 40.5 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 22/196 (11%), Positives = 54/196 (27%), Gaps = 12/196 (6%) Query: 8 RQNPEHLDIALKK-RH-----LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 R+ + +K R L+ + + + KK+E+ + RN + +I Sbjct: 276 REEFNRIAKEQRKIRDELNASLKENLNKAIEFRNERNEINKKVEEAKKARNEANNKIRNL 335 Query: 62 IAEGNLSLVDALKNETSTLKEQLPIL--EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 ++NE + + + + ++ + E+ + A Sbjct: 336 EWSSGKRDKIKIENEIKKIDKIIETRVLDIKKENQLVKNANDLRKQLMEIHEDESVKGEA 395 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLM----DFDRATKLSGARFSVLTGHLAHLE 175 E + + + E L D A + +F + + Sbjct: 396 QELKKLSEEEHEKVIDFSEKAQAAHEEMLKFFRKTDDIRTAADEAHKKFIEARKNASAKH 455 Query: 176 RALGQFMIDLHTSEHG 191 + D+H Sbjct: 456 EEFKSILSDIHVINKK 471 >gi|145614628|ref|XP_361992.2| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|145021541|gb|EDK05670.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 806 Score = 40.5 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E I+ LD+K + ++E +R ++ S + E S + L++E L ++ Sbjct: 341 EDIMRLDQKIMTIQIELESLRKEKDVASRE----RREKLESDLKKLQDEVKELNDK 392 >gi|609535|gb|AAB37740.1| 66 kDa neurofilament protein NF-66 [Mus musculus] Length = 501 Score = 40.5 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +GQ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGQLFQR 145 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 146 ERRELRAQLEEASSA 160 >gi|288803732|ref|ZP_06409161.1| conserved hypothetical protein [Prevotella melaninogenica D18] gi|288333821|gb|EFC72267.1| conserved hypothetical protein [Prevotella melaninogenica D18] Length = 621 Score = 40.5 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 43/96 (44%), Gaps = 19/96 (19%) Query: 8 RQNPEHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRNS---------NS 55 R+ ++ LKK R ++ +LD + L+++ E ++ N+ S Sbjct: 532 RKRVDNFRNNLKKVADRGVD-------ALDNERGRLLRRFEQLKQEVNTYENNLGFLNIS 584 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 ++ G ++ + + LK++ +K+++ ++ E Sbjct: 585 SKKGNSLIDEMNRRIQKLKDDMDEVKQKIKAIDAEN 620 >gi|254582250|ref|XP_002497110.1| ZYRO0D15642p [Zygosaccharomyces rouxii] gi|238940002|emb|CAR28177.1| ZYRO0D15642p [Zygosaccharomyces rouxii] Length = 1170 Score = 40.5 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 8/116 (6%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSL----DEKNRILIKKIEDIRARRNSNSAQIGQ 60 + IR+ E ++ ++ + I + +E N K+E ++ +S + +IG+ Sbjct: 752 RQIRECEEEIEQKQS--YMSQLQDEIRKIQDDMEEFNNDKGTKLEKLKKEIDSLTKEIGK 809 Query: 61 A--IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 I + L L+ ET L ++ E + +SL + ++ E Sbjct: 810 LDSITDKKYDLYQNLQLETEQLTSEISSDEDALEHMNTSLDNFQNQKKSLIAELEH 865 >gi|238810062|dbj|BAH69852.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 466 Score = 40.5 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 58/152 (38%), Gaps = 13/152 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + LP+ + SFR+E + R +F + EL Sbjct: 184 TAQGIFVNFKNVQRSMRSKLPMGIGQVGKSFRNEV----TPGNFIFRTREFEQMELEVFC 239 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 +++ ++ + AE+ + L L V + +L + T D+E + Sbjct: 240 HPKEANKLYKYYIKKAEKFAEYLGLSKENVRIREHEKEELSHYSSGTSDIEYLFPF--GW 297 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFT 379 E+ + ++ +N+ + ++L++ Sbjct: 298 GELLGIANRTDY---DLNAHMK-ATGENLEYV 325 >gi|325295392|ref|YP_004281906.1| DNA repair protein RecN [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065840|gb|ADY73847.1| DNA repair protein RecN [Desulfurobacterium thermolithotrophum DSM 11699] Length = 520 Score = 40.5 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 2/86 (2%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 E + LKK +E + E + +LD + + + +E++R S + +I + +G L + Sbjct: 291 EEVQKFLKK--IERRLEALENLDFEVEKVQRDLEELRKELESLANKISELRKKGAEKLKE 348 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSS 97 L + S L + E + + Sbjct: 349 YLISSFSELCMESARFEIKLKPLEDF 374 >gi|167375250|ref|XP_001739814.1| DNA repair protein Rad-50 [Entamoeba dispar SAW760] gi|165896361|gb|EDR23790.1| DNA repair protein Rad-50, putative [Entamoeba dispar SAW760] Length = 926 Score = 40.5 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 40/95 (42%), Gaps = 4/95 (4%) Query: 10 NPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 N + KKR++E + + ++ L ++ L I++++ R N ++ + E + Sbjct: 347 NRATIAYNAKKRNIEGRITRQRMIDLKDERDKLRSTIKNLKKRYNKIERKV--LLNEESP 404 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 + LK + + ++ + + + + + Sbjct: 405 EKISDLKKRMTEIINEIKDTKDKYQNAQNGIHQYF 439 >gi|255102548|ref|ZP_05331525.1| putative cell surface protein [Clostridium difficile QCD-63q42] Length = 522 Score = 40.5 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 19/86 (22%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSA--------------QIGQAIAEGNLSL 69 E + I ++++++ L +K++ + +I + + S Sbjct: 156 ELSKDNISKMEKESKELQEKLDKLNQEIKDKDKLSDKQKDKIKDLEDKIDKLKGKLEKSK 215 Query: 70 VDA-----LKNETSTLKEQLPILEKE 90 D +K E L +++ LEK+ Sbjct: 216 ADKDLSTDMKKEMDKLTDKIKELEKK 241 >gi|330795748|ref|XP_003285933.1| hypothetical protein DICPUDRAFT_149834 [Dictyostelium purpureum] gi|325084106|gb|EGC37542.1| hypothetical protein DICPUDRAFT_149834 [Dictyostelium purpureum] Length = 755 Score = 40.5 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 12/89 (13%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 + ++ L+ R + + I L+E+N+ L+ +IE ++ Q N ++ Sbjct: 469 DQIEENLQTRFQQEKL--IFKLNEQNKELVDQIEILKE----------QLAQSNNEDQIN 516 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKK 100 L E + LK+Q+ L++++ + L + Sbjct: 517 QLNLENNQLKDQIESLKQQDRDKEELLNQ 545 >gi|326201409|ref|ZP_08191281.1| hypothetical protein Cpap_4245 [Clostridium papyrosolvens DSM 2782] gi|325988977|gb|EGD49801.1| hypothetical protein Cpap_4245 [Clostridium papyrosolvens DSM 2782] Length = 331 Score = 40.5 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 40/94 (42%), Gaps = 12/94 (12%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKN----RILIKKIEDIRARRNSNSAQIG 59 + + +NP+ + + + L+ + ILS+D + R + +++ ++A I Sbjct: 189 KEVLENPDKISQTVLSKGLDAGTAFEILSIDIADVDVGRNIGAQLQTLQAE---ADKNIA 245 Query: 60 QAIAEGNLSLV----DALKNETSTLKEQLPILEK 89 QA AE ++ +K ++ ++ E Sbjct: 246 QAKAEERRAMAVAKEQEMKAAVQEMRAKVVEAEA 279 >gi|253567818|ref|ZP_04845229.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6] gi|251841891|gb|EES69971.1| threonyl-tRNA synthetase [Bacteroides sp. 1_1_6] Length = 556 Score = 40.5 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 49/177 (27%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 Q + + + Y EV P + +G K+ D F + Sbjct: 277 LQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMN 336 Query: 238 NLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + EI K LPLR R E + G+ R F + + R Sbjct: 337 CPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + E R++ + + ++ + D + W + E Sbjct: 394 DQVKDEFLRVMDIISIVFRSMNFQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIE 450 >gi|148642779|ref|YP_001273292.1| phosphoserine phosphatase SerB [Methanobrevibacter smithii ATCC 35061] gi|148551796|gb|ABQ86924.1| phosphoserine phosphatase, HAD family, SerB [Methanobrevibacter smithii ATCC 35061] Length = 529 Score = 40.5 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 22/196 (11%), Positives = 54/196 (27%), Gaps = 12/196 (6%) Query: 8 RQNPEHLDIALKK-RH-----LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 R+ + +K R L+ + + + KK+E+ + RN + +I Sbjct: 276 REEFNRIAKEQRKIRDELNASLKENLNKAIEFRNERNEINKKVEEAKKARNEANNKIRNL 335 Query: 62 IAEGNLSLVDALKNETSTLKEQLPIL--EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 ++NE + + + + ++ + E+ + A Sbjct: 336 EWSSGKRDKIKIENEIKKIDKIIETRVLDIKKENQLVKNANDLRKQLMEIHEDESVKGEA 395 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLM----DFDRATKLSGARFSVLTGHLAHLE 175 E + + + E L D A + +F + + Sbjct: 396 QELKKLSEEEHEKVIDFSEKAQAAHEEMLKFFRKTDDIRTAADEAHKKFIEARKNASAKH 455 Query: 176 RALGQFMIDLHTSEHG 191 + D+H Sbjct: 456 EEFKSILSDIHVINKK 471 >gi|157117183|ref|XP_001652975.1| moesin/ezrin/radixin [Aedes aegypti] gi|122068139|sp|Q170J7|MOEH_AEDAE RecName: Full=Moesin/ezrin/radixin homolog 1 gi|108876119|gb|EAT40344.1| moesin/ezrin/radixin [Aedes aegypti] Length = 583 Score = 40.5 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 56/161 (34%), Gaps = 11/161 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN---------SAQ 57 +R E ++ + +L E I L+++ + L +++ AR+N S Sbjct: 350 LRTMQEEMERSQA--NLIEAQEMIRRLEDQLKQLQFAKDELEARQNELQVMIKRLEESKN 407 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + A + + A + E ++E++ + + E + +++ + T Sbjct: 408 MEVAERQKLEDEIRAKQEEVQKIQEEVSVKDTETKRLQEEVEEARRKQNEAAAALLAATT 467 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 + N + + + E+ + D D K Sbjct: 468 TPNHHHVDEEEEDNEEELTNGAENGTSRDYSKDFDTDEHIK 508 >gi|319777143|ref|YP_004136794.1| glycyl-tRNA synthetase [Mycoplasma fermentans M64] gi|318038218|gb|ADV34417.1| Glycyl-tRNA synthetase [Mycoplasma fermentans M64] Length = 453 Score = 40.5 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 58/152 (38%), Gaps = 13/152 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + LP+ + SFR+E + R +F + EL Sbjct: 171 TAQGIFVNFKNVQRSMRSKLPMGIGQVGKSFRNEV----TPGNFIFRTREFEQMELEVFC 226 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 +++ ++ + AE+ + L L V + +L + T D+E + Sbjct: 227 HPKEANKLYKYYIKKAEKFAEYLGLSKENVRIREHEKEELSHYSSGTSDIEYLFPF--GW 284 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFT 379 E+ + ++ +N+ + ++L++ Sbjct: 285 GELLGIANRTDY---DLNAHMK-ATGENLEYV 312 >gi|225426369|ref|XP_002269404.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1054 Score = 40.5 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Query: 35 EKNRILIKKIEDIRAR---RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 EK + L KIE++ +R N +S A+ +D L E ++LKE+ +E E Sbjct: 958 EKEKDLQNKIEELESRMEDLNQSSKSFSSAMTIREQFELDDLLMEMTSLKEKNKSMEGEL 1017 Query: 92 HEVCSSLKKLISCIP 106 E+ ++ Sbjct: 1018 KEMQERYSEISLKFA 1032 >gi|322502631|emb|CBZ37714.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 870 Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 25/196 (12%) Query: 4 IQWIRQNPEHLDIAL---KKR-----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 ++ I++N + L +L ++R E S++ D++ R L + E +R R Sbjct: 86 MKLIQEN-DELRQSLTEAERRVREISGRERDSDH--DADKRIRELQSECERMRKER---- 138 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +++ + + L+++L E+ + E + Sbjct: 139 --------LREYKELESTRRLCADLQKRLDDDEETLKSAKELWDQERDRYQQKIDELLDF 190 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 A ++ R+ + E F + E + +R K + E Sbjct: 191 NKRAERPLVTRTAWHRDGPADEPLEQFLLKEEVAQ--LERTLKEVQHKNWEKEKTWVRTE 248 Query: 176 RALGQFMIDLHTSEHG 191 L + +L S Sbjct: 249 TELRHHINELQVSGRS 264 >gi|321398696|emb|CAM71686.2| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 870 Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 25/196 (12%) Query: 4 IQWIRQNPEHLDIAL---KKR-----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 ++ I++N + L +L ++R E S++ D++ R L + E +R R Sbjct: 86 MKLIQEN-DELRQSLTEAERRVREISGRERDSDH--DADKRIRELQSECERMRKER---- 138 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +++ + + L+++L E+ + E + Sbjct: 139 --------LREYKELESTRRLCADLQKRLDDDEETLKSAKELWDQERDRYQQKIDELLDF 190 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 A ++ R+ + E F + E + +R K + E Sbjct: 191 NKRAERPLVTRTAWHRDGPADEPLEQFLLKEEVAQ--LERTLKEVQHKNWEKEKTWVRTE 248 Query: 176 RALGQFMIDLHTSEHG 191 L + +L S Sbjct: 249 TELRHHINELQVSGRS 264 >gi|153810740|ref|ZP_01963408.1| hypothetical protein RUMOBE_01124 [Ruminococcus obeum ATCC 29174] gi|149833136|gb|EDM88218.1| hypothetical protein RUMOBE_01124 [Ruminococcus obeum ATCC 29174] Length = 464 Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 58/191 (30%), Gaps = 13/191 (6%) Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT 231 A + + F+ + + + + + M+ T Q +D T T Sbjct: 120 AWSQEQMMNFIKEHEVPCPSCGKHNFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPET 175 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ N + + K +P + SFR+E R +F + EL Sbjct: 176 AQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCE 231 Query: 292 EEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLYR 348 + + L L L V D L F + T D+E + Sbjct: 232 PDTDLEWFAYWKKFCLDWLSSLGLKDDEVRYRDHDKEELSFYSKATTDVEFLFPF--GWG 289 Query: 349 EISSCSTCGNF 359 E+ + ++ Sbjct: 290 ELWGIADRTDY 300 >gi|146414225|ref|XP_001483083.1| hypothetical protein PGUG_05038 [Meyerozyma guilliermondii ATCC 6260] Length = 802 Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 9/102 (8%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A L+ +S + I LD + + ++E +R + S + Sbjct: 324 IDLVDEACSTLRLQHESRPDAITQLDRQIMTIQIELESLRKEEDQLS-------VDRKNK 376 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 L + LK + + L+E E E+ + + Sbjct: 377 LEEELKAKQAELEEFTKQWELEKQSIDEVKNAKMELEQARFD 418 >gi|325280567|ref|YP_004253109.1| transcription elongation factor GreA [Odoribacter splanchnicus DSM 20712] gi|324312376|gb|ADY32929.1| transcription elongation factor GreA [Odoribacter splanchnicus DSM 20712] Length = 158 Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 11/61 (18%) Query: 38 RILIKKIEDIRA-RRNSNSAQIGQAIAEGNLSLVDA----------LKNETSTLKEQLPI 86 + L +++E ++ R S IG+AI +G++S L+ + + LK+ + Sbjct: 14 KKLQEELERLQNVERPKISKAIGEAIEKGDISENAEYDAAKDAQGLLEAKIAQLKDTIAT 73 Query: 87 L 87 Sbjct: 74 C 74 >gi|302670581|ref|YP_003830541.1| glycyl-tRNA synthetase GlyS [Butyrivibrio proteoclasticus B316] gi|302395054|gb|ADL33959.1| glycyl-tRNA synthetase GlyS [Butyrivibrio proteoclasticus B316] Length = 469 Score = 40.5 bits (93), Expect = 0.55, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 68/209 (32%), Gaps = 16/209 (7%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 + F+ + + + + M+ T Q +D T T+ Sbjct: 124 WSHEEMENFIKEHSVPCPSCGKHNFTGIREFNLMFKTFQ--GVTEDAKDT--VYLRPETA 179 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + + K +P + SFR+E R +F + EL + Sbjct: 180 QGIFVNFKNVQRTSRKKVPFGICQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKP 235 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLYRE 349 E E L L + + L D L F + T D+E + + E Sbjct: 236 GTQTEWFEYWRKTCYEWLLSLGIKKENLRLRDHDPEELSFYSDHTTDIEYAFPFTD-WGE 294 Query: 350 ISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 + ++ ++ +R+++ + + + + Sbjct: 295 LWGIASRTDYD----LTRHQETSGQPMDY 319 >gi|225856913|ref|YP_002738424.1| chromosome segregation protein SMC [Streptococcus pneumoniae P1031] gi|225724779|gb|ACO20631.1| chromosome segregation protein SMC [Streptococcus pneumoniae P1031] Length = 1179 Score = 40.5 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 481 >gi|146099267|ref|XP_001468599.1| hypothetical protein [Leishmania infantum] Length = 870 Score = 40.5 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 25/196 (12%) Query: 4 IQWIRQNPEHLDIAL---KKR-----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 ++ I++N + L +L ++R E S++ D++ R L + E +R R Sbjct: 86 MKLIQEN-DELRQSLTEAERRVREISGRERDSDH--DADKRIRELQSECERMRKER---- 138 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +++ + + L+++L E+ + E + Sbjct: 139 --------LREYKELESTRRLCADLQKRLDDDEETLKSAKELWDQERDRYQQKIDELLDF 190 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 A ++ R+ + E F + E + +R K + E Sbjct: 191 NKRAERPLVTRTAWHRDGPADEPLEQFLLKEEVAQ--LERTLKEVQHKNWEKEKTWVRTE 248 Query: 176 RALGQFMIDLHTSEHG 191 L + +L S Sbjct: 249 TELRHHINELQVSGRS 264 >gi|56963437|ref|YP_175168.1| hypothetical protein ABC1672 [Bacillus clausii KSM-K16] gi|81366376|sp|Q5WHE8|Y1672_BACSK RecName: Full=UPF0365 protein ABC1672 gi|56909680|dbj|BAD64207.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 340 Score = 40.5 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 23/130 (17%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNS 55 D + + +NP+ + + + L+ + ILS+D KN + + +A +N Sbjct: 189 DHKKVLENPDMISQTVLSKGLDSGTAFEILSIDIADIDIGKNIGAELQTDQAQADKN--- 245 Query: 56 AQIGQAIAEGN-----------LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 I QA AE + V+ ++ + + ++P+ E Sbjct: 246 --IAQAKAEERRAMAVAKEQEMKARVEEMRAKVVEAEAEVPMALSEALRQGHMGVMDYMN 303 Query: 105 IPNVPLEEVP 114 NV + Sbjct: 304 YQNVMADTDM 313 >gi|302876194|ref|YP_003844827.1| hypothetical protein Clocel_3384 [Clostridium cellulovorans 743B] gi|307686925|ref|ZP_07629371.1| hypothetical protein Ccel74_02136 [Clostridium cellulovorans 743B] gi|302579051|gb|ADL53063.1| hypothetical protein Clocel_3384 [Clostridium cellulovorans 743B] Length = 332 Score = 40.5 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 8/79 (10%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKN----RILIKKIEDIRARRNSNSAQIG 59 + + +NP+ + + + L+ + ILS+D + R + +++ ++A I Sbjct: 192 KIVLENPDAISKTVLNKGLDAGTAFEILSIDIADVDVGRNIGAQLQTLQAE---ADKNIA 248 Query: 60 QAIAEGNLSLVDALKNETS 78 QA AE ++ A + E Sbjct: 249 QAKAEERRAMAVAKEQEMR 267 >gi|225433351|ref|XP_002282738.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297741880|emb|CBI33315.3| unnamed protein product [Vitis vinifera] Length = 804 Score = 40.5 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 20/45 (44%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 + + SL+++ + L I+ ++ + ++ +A A G Sbjct: 578 KKVSSLEKERQDLQLTIDALQEEKKLLQKKVRKASANGKSIDASK 622 >gi|78044061|ref|YP_361284.1| hypothetical protein CHY_2490 [Carboxydothermus hydrogenoformans Z-2901] gi|77996176|gb|ABB15075.1| conserved domain protein [Carboxydothermus hydrogenoformans Z-2901] Length = 155 Score = 40.5 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 43/109 (39%), Gaps = 2/109 (1%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 + I L + L ++ ++A N A++ + AE G + ++ L+ E + +K ++ Sbjct: 46 KEINELRAEVNELRAEVNGLKAETNELRAEMSELKAEVNGLRTEMNELRTEMNEMKNKIT 105 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 +E + + + ++ + + + + K+ + Sbjct: 106 TMEDKIAAMEKDIAEIKATLREHTEKLDFAMFKLINHEEQLFAMKRTNW 154 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNETSTLKEQLPI 86 + L + K+I ++RA N A++ AE N + + LK E + L+ ++ Sbjct: 33 AVEELRSDINEMRKEINELRAEVNELRAEVNGLKAETNELRAEMSELKAEVNGLRTEMNE 92 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 L E +E+ + + + I + + I + E+ H Sbjct: 93 LRTEMNEMKNKITTMEDKIAAMEKDIAEIKATLREHTEKLDFAMFKLINH 142 >gi|73662500|ref|YP_301281.1| glycyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123747875|sp|Q49Y08|SYG_STAS1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|72495015|dbj|BAE18336.1| glycyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 463 Score = 40.5 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRTMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + LK L+L L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASQWLKDLNLSEEATRLRDHDADELSHYSNATTDIEYRFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 289 GELWGIASRTDF 300 >gi|189467488|ref|ZP_03016273.1| hypothetical protein BACINT_03877 [Bacteroides intestinalis DSM 17393] gi|189435752|gb|EDV04737.1| hypothetical protein BACINT_03877 [Bacteroides intestinalis DSM 17393] Length = 862 Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 12/105 (11%) Query: 12 EHLDIA--LKKRHLE--PQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA----- 61 + + A L R++ + + L DE L +++ + + S +I Q Sbjct: 366 DAIIAAVELSNRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIERE 425 Query: 62 --IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 E + ++ + E + LKEQ + + + + K+ Sbjct: 426 AIKRENDKPKLEQIGKELAELKEQEKSHKAKWQSEKTLVNKIQQN 470 >gi|157118641|ref|XP_001659192.1| myosin heavy chain, nonmuscle or smooth muscle [Aedes aegypti] gi|108883254|gb|EAT47479.1| myosin heavy chain, nonmuscle or smooth muscle [Aedes aegypti] Length = 1888 Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R L+ E I L+ K + L +++++ + + + + S + LK + Sbjct: 1414 TRELDEAYEKIDDLETKRKALQNELDELANTQGTADKNVHELEKAKRALESQLAELKAQN 1473 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L + Sbjct: 1474 EELEDDLQLTEDAKLRLEVNMQALRAQFE 1502 >gi|15901108|ref|NP_345712.1| hypothetical protein SP_1247 [Streptococcus pneumoniae TIGR4] gi|111658430|ref|ZP_01409109.1| hypothetical protein SpneT_02000401 [Streptococcus pneumoniae TIGR4] gi|14972729|gb|AAK75352.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4] Length = 1179 Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 481 >gi|320038265|gb|EFW20201.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 723 Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 6/109 (5%) Query: 12 EHLDIALK---KRHLEPQSEY--ILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEG 65 + + + KR + S + +L+ K L ++ I A++ A+I + E Sbjct: 604 DEIQERIASPSKRGKDATSNKRSLAALERKEAKLNSQLNKIEAQQQKIVAKIELKRRKEL 663 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 LK E TLK+++ ++ E + + +S + + E Sbjct: 664 EKDERIRLKVEVETLKKEMDRMKVEISRLRQERGQWVSIVGKLQQENTE 712 >gi|281343320|gb|EFB18904.1| hypothetical protein PANDA_019175 [Ailuropoda melanoleuca] Length = 851 Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ + L++R E Q E +L+ + + + E +R+ +I + Sbjct: 136 RESADREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 193 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 194 AEDKVKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 253 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 254 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEMV 293 >gi|303316838|ref|XP_003068421.1| hypothetical protein CPC735_004470 [Coccidioides posadasii C735 delta SOWgp] gi|240108102|gb|EER26276.1| hypothetical protein CPC735_004470 [Coccidioides posadasii C735 delta SOWgp] Length = 723 Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 6/109 (5%) Query: 12 EHLDIALK---KRHLEPQSEY--ILSLDEKNRILIKKIEDIRARRNSNSAQIG-QAIAEG 65 + + + KR + S + +L+ K L ++ I A++ A+I + E Sbjct: 604 DEIQERIASPSKRGKDATSNKRSLAALERKEAKLNSQLNKIEAQQQKIVAKIELKRRKEL 663 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 LK E TLK+++ ++ E + + +S + + E Sbjct: 664 EKDERIRLKVEVETLKKEMDRMKVEISRLRQERGQWVSIVGKLQQENTE 712 >gi|332203095|gb|EGJ17163.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA47901] Length = 1179 Score = 40.5 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 481 >gi|319641577|ref|ZP_07996265.1| hypothetical protein HMPREF9011_01863 [Bacteroides sp. 3_1_40A] gi|317386851|gb|EFV67742.1| hypothetical protein HMPREF9011_01863 [Bacteroides sp. 3_1_40A] Length = 841 Score = 40.5 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 55/169 (32%), Gaps = 16/169 (9%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL----------KNETS 78 + LD R K+ ++++ ++ + I + + V+ K E Sbjct: 530 DLSELDAMQREADNKVYALQSQISALEKENESLIKQIANASVEDAVSLRQKYNENKAEID 589 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 LK +L ++++ E+ + ++ S + I + ++ + + Sbjct: 590 RLKPELAAWQQKQEEIAQAKEEAQSDNDVQTDDYYRIPAIMQDCKTAYNITWQDNGSWNG 649 Query: 139 REHFE---IGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 + I G++ F K+ + RA+ Q D Sbjct: 650 YTYIRKGTIPNINGIITFKATLKIDRKPKYF---LGIKIHRAILQISWD 695 >gi|157118639|ref|XP_001659191.1| myosin heavy chain, nonmuscle or smooth muscle [Aedes aegypti] gi|108883253|gb|EAT47478.1| myosin heavy chain, nonmuscle or smooth muscle [Aedes aegypti] Length = 2001 Score = 40.5 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R L+ E I L+ K + L +++++ + + + + S + LK + Sbjct: 1527 TRELDEAYEKIDDLETKRKALQNELDELANTQGTADKNVHELEKAKRALESQLAELKAQN 1586 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L + Sbjct: 1587 EELEDDLQLTEDAKLRLEVNMQALRAQFE 1615 >gi|327389482|gb|EGE87827.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA04375] Length = 1179 Score = 40.5 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 481 >gi|254993922|ref|ZP_05276112.1| DNA topoisomerase IV subunit A [Listeria monocytogenes FSL J2-064] Length = 492 Score = 40.5 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIR--QNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR ++ + L+ + E Q+E I+SL + R+ I ++++ S + Sbjct: 62 LDEVIKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 120 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 121 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 152 >gi|149019238|ref|ZP_01834600.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP23-BS72] gi|147931108|gb|EDK82087.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP23-BS72] Length = 1179 Score = 40.5 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 481 >gi|148993856|ref|ZP_01823258.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP9-BS68] gi|168489074|ref|ZP_02713273.1| chromosome segregation protein SMC [Streptococcus pneumoniae SP195] gi|147927681|gb|EDK78706.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP9-BS68] gi|183572487|gb|EDT93015.1| chromosome segregation protein SMC [Streptococcus pneumoniae SP195] gi|301794329|emb|CBW36754.1| putative chromosome partition protein [Streptococcus pneumoniae INV104] gi|332073585|gb|EGI84064.1| chromosome segregation protein SMC [Streptococcus pneumoniae GA17570] Length = 1179 Score = 40.5 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 481 >gi|225860920|ref|YP_002742429.1| chromosome segregation protein SMC [Streptococcus pneumoniae Taiwan19F-14] gi|298229965|ref|ZP_06963646.1| chromosome segregation protein SMC [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254344|ref|ZP_06977930.1| chromosome segregation protein SMC [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502756|ref|YP_003724696.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus pneumoniae TCH8431/19A] gi|225727720|gb|ACO23571.1| chromosome segregation protein SMC [Streptococcus pneumoniae Taiwan19F-14] gi|298238351|gb|ADI69482.1| SMC structural maintenance of chromosomes partitioning protein [Streptococcus pneumoniae TCH8431/19A] Length = 1179 Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 481 >gi|255282516|ref|ZP_05347071.1| glycine--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255266809|gb|EET60014.1| glycine--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 465 Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 59/191 (30%), Gaps = 13/191 (6%) Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT 231 A + + F+ + + + + + + M+ T Q +D T T Sbjct: 120 AWTQEQMKNFIDEHNVPCPTCGKHNFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPET 175 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ N + + K +P + SFR+E R +F + EL Sbjct: 176 AQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCE 231 Query: 292 EEDSFTEHERMLSCAEEILKRL---DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + + L L D R +L F + T D+E + Sbjct: 232 PDTDLEWFAYWKQFCLDWLHNLGLKDDEVRYRDHEKEELSFYSKATTDVEFLFPF--GWG 289 Query: 349 EISSCSTCGNF 359 E+ + ++ Sbjct: 290 ELWGIADRTDY 300 >gi|238484425|ref|XP_002373451.1| spindle-pole body protein (Pcp1), putative [Aspergillus flavus NRRL3357] gi|220701501|gb|EED57839.1| spindle-pole body protein (Pcp1), putative [Aspergillus flavus NRRL3357] Length = 445 Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 39/93 (41%), Gaps = 14/93 (15%) Query: 3 DIQWIRQNPEHLDIALKK--------RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN 54 D++ R + L L++ R ++ E + S D++ R L E++R ++ Sbjct: 266 DLEAYRVQFQELREKLRRGQLDETSQREMDLMREELESKDQRVRELQ---EELRDAKDRQ 322 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 S +I + + + L+ + ++E+ Sbjct: 323 SEEIEKLQR---DARLSELRAQVRRIREERAFC 352 >gi|224011437|ref|XP_002295493.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209583524|gb|ACI64210.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1257 Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 34/83 (40%), Gaps = 8/83 (9%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 + L+ NR KI+ + +N+ + + + + ++ L + L+EQL Sbjct: 716 INQVKELEHANRRFKVKIDMLEREKNTITKK--------HDAKLEDLNTKNKALEEQLAE 767 Query: 87 LEKEEHEVCSSLKKLISCIPNVP 109 E + + S+ +++ + Sbjct: 768 WESKASILESNNREMAQELEAKL 790 >gi|71018527|ref|XP_759494.1| hypothetical protein UM03347.1 [Ustilago maydis 521] gi|46098982|gb|EAK84215.1| hypothetical protein UM03347.1 [Ustilago maydis 521] Length = 2363 Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDA 72 AL R + Q+ +D + + L + +++ R + ++G A AE + + A Sbjct: 1086 REALATRDNDLQAAK-QEVDARTKELAARNQELEMR----TKELGAAKAEIDDLQKNITA 1140 Query: 73 LKNETSTLKEQLPILEKEE 91 L+ E LK+QL L+K Sbjct: 1141 LRAEMEQLKQQLAELQKSH 1159 >gi|308189914|ref|YP_003922845.1| glycine--tRNA ligase [Mycoplasma fermentans JER] gi|307624656|gb|ADN68961.1| glycine--tRNA ligase [Mycoplasma fermentans JER] Length = 446 Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 58/152 (38%), Gaps = 13/152 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + LP+ + SFR+E + R +F + EL Sbjct: 171 TAQGIFVNFKNVQRSMRSKLPMGIGQVGKSFRNEV----TPGNFIFRTREFEQMELEVFC 226 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 +++ ++ + AE+ + L L V + +L + T D+E + Sbjct: 227 HPKEANKLYKYYIKKAEKFAEYLGLSKENVRIREHEKEELSHYSSGTSDIEYLFPF--GW 284 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKFT 379 E+ + ++ +N+ + ++L++ Sbjct: 285 GELLGIANRTDY---DLNAHMK-ATGENLEYV 312 >gi|258611761|ref|ZP_05711629.1| DNA topoisomerase IV subunit A [Listeria monocytogenes FSL R2-503] gi|258605976|gb|EEW18584.1| DNA topoisomerase IV subunit A [Listeria monocytogenes FSL R2-503] Length = 504 Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIR--QNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR ++ + L+ + E Q+E I+SL + R+ I ++++ S + Sbjct: 74 LDEVIKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 132 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 133 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 164 >gi|225859041|ref|YP_002740551.1| chromosome segregation protein SMC [Streptococcus pneumoniae 70585] gi|225721362|gb|ACO17216.1| chromosome segregation protein SMC [Streptococcus pneumoniae 70585] Length = 1179 Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 481 >gi|221231941|ref|YP_002511093.1| chromosome partition protein [Streptococcus pneumoniae ATCC 700669] gi|220674401|emb|CAR68951.1| putative chromosome partition protein [Streptococcus pneumoniae ATCC 700669] Length = 1179 Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 481 >gi|222110480|ref|YP_002552744.1| parb domain-containing protein nuclease [Acidovorax ebreus TPSY] gi|221729924|gb|ACM32744.1| ParB domain protein nuclease [Acidovorax ebreus TPSY] Length = 689 Score = 40.5 bits (93), Expect = 0.60, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 4/80 (5%) Query: 25 PQSEYILSLDEKNRI-LIKKIE---DIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 + R ++ + ++A+ N + + A+ + DAL+ E L Sbjct: 305 ADLHAFQRAPRERREPTKREAQRIGKLQAKLNELAEAVDAALDAEDEDKADALQEEGEAL 364 Query: 81 KEQLPILEKEEHEVCSSLKK 100 EQL LE + ++K Sbjct: 365 GEQLQTLEDGLQDYSPNVKA 384 >gi|168493168|ref|ZP_02717311.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC3059-06] gi|183576749|gb|EDT97277.1| chromosome segregation protein SMC [Streptococcus pneumoniae CDC3059-06] Length = 1179 Score = 40.5 bits (93), Expect = 0.60, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 481 >gi|160878806|ref|YP_001557774.1| glycyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|189082277|sp|A9KJ36|SYG_CLOPH RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|160427472|gb|ABX41035.1| glycyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 462 Score = 40.5 bits (93), Expect = 0.60, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 13/191 (6%) Query: 172 AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPT 231 A + ++ + + + + + M+ T Q +D T T Sbjct: 120 AWSHEEMSAYIEKNNIPCPTCGKHNFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPET 175 Query: 232 SEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ N + + K +P + SFR+E R +F + EL Sbjct: 176 AQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEI----TPGNFTFRTREFEQMELEFFCE 231 Query: 292 EEDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYR 348 + + L+ L + RV +L F + T D+E + Sbjct: 232 PDTDLEWFAYWKQFCIDWLQTLGIKEDEMRVRDHEKEELSFYSKATSDIEFLFPF--GWG 289 Query: 349 EISSCSTCGNF 359 E+ + ++ Sbjct: 290 ELWGIADRTDY 300 >gi|68076271|ref|XP_680055.1| prolyl-t-RNA synthase [Plasmodium berghei strain ANKA] gi|56500925|emb|CAH98273.1| prolyl-t-RNA synthase, putative [Plasmodium berghei] Length = 523 Score = 40.5 bits (93), Expect = 0.60, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 86/243 (35%), Gaps = 19/243 (7%) Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L + V + + G KF +D + + ++L Sbjct: 133 LWNISDRYKLYSDEFLYVYKQKQQKADTNLGETIKKKFEEDGNILSP---TCEETALTLI 189 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + K PL FR+E R + + + +F + S E Sbjct: 190 NEVYNLNATEKHFPLLIHQYNYKFRNEK----RLEKSLFKSKEFLMKDGYSFHTNEKCMN 245 Query: 298 EHERMLS-CAEEILKRLDLHYRVVSLCTGD-LGFSACKTYDLEVWLAGQNLYREISSCST 355 E + C +I +L L Y ++ D + Y + ++E + Sbjct: 246 EIYEIYKECYNDIFNKLGLKYNIIKKRKKDKMNALESHEYQILC---RDGKFKEGAHIFK 302 Query: 356 CGNFQSRRMNSRY-RDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSVTIPTVL 413 G++ S+++N + N K + GS G+ + R L +++N+ + +G + +P+ + Sbjct: 303 LGDYYSKKLNINFLNKKNEKKNIYM----GSYGIGINRLLYFLIDNFYDENG-IKLPSQV 357 Query: 414 RPY 416 P+ Sbjct: 358 APF 360 >gi|126325249|ref|XP_001365735.1| PREDICTED: similar to intersectin long isoform 2 [Monodelphis domestica] Length = 1713 Score = 40.1 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 39/102 (38%), Gaps = 3/102 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 Q +R + ++ + R + + + ++ R I + ++ ++N + ++ Q E Sbjct: 579 QQLRDQLDEVEK--ETRSKLQEIDIFNNQLKELRE-IHNKQQLQKQKNLEAERLKQKEKE 635 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 ++ K E+ + L++ + + K + Sbjct: 636 RKTVELEKQKEESQRRSQDKQWLDRVQQDEEYQRPKKLHDEE 677 >gi|70726352|ref|YP_253266.1| glycyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|123762313|sp|Q4L6R5|SYG_STAHJ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|68447076|dbj|BAE04660.1| glycyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] Length = 463 Score = 40.1 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + LK L+++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASQWLKDLNINEENMRLRDHDEEELSHYSNATTDIEYRFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 289 GELWGIASRTDF 300 >gi|303232144|ref|ZP_07318847.1| peptidase, M23 family [Veillonella atypica ACS-049-V-Sch6] gi|302513250|gb|EFL55289.1| peptidase, M23 family [Veillonella atypica ACS-049-V-Sch6] Length = 398 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 10/87 (11%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ R + E L E ++ L++ +IE +A RN A Sbjct: 164 IKKERADIEAHKQKL-----EADRAKLVELEKAALAKQAEIEQKKAERNVV-----LQKA 213 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKE 90 + + + E + Q+ + KE Sbjct: 214 QNDRATAMQAIEELNASSAQVSAMLKE 240 >gi|260170790|ref|ZP_05757202.1| threonyl-tRNA synthetase [Bacteroides sp. D2] gi|315919124|ref|ZP_07915364.1| threonyl-tRNA synthetase [Bacteroides sp. D2] gi|313692999|gb|EFS29834.1| threonyl-tRNA synthetase [Bacteroides sp. D2] Length = 646 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 49/177 (27%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 Q + + + Y EV P + +G K+ D F + Sbjct: 277 LQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMN 336 Query: 238 NLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + EI K LPLR R E + G+ R F + + R Sbjct: 337 CPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E E R++ + + +D + D + W + E Sbjct: 394 EQVKDEFLRVMDIISIVFRSMDFQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIE 450 >gi|254498203|ref|ZP_05110951.1| hypothetical protein LDG_2626 [Legionella drancourtii LLAP12] gi|254352576|gb|EET11363.1| hypothetical protein LDG_2626 [Legionella drancourtii LLAP12] Length = 4687 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 14/134 (10%), Positives = 45/134 (33%), Gaps = 8/134 (5%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDAL 73 ++R + E ++ +D + +KI++++A+R +I + + Sbjct: 4417 DGQERRMFQTSYELLVEMDRDVISIQEKIDELKAQRK---REIAVLREKYGIVKEKLAEN 4473 Query: 74 KNETSTLKEQLPILEKEEHEVCSS---LKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 + +K +L + K + ++ + V E+ I+ + Sbjct: 4474 AAKVKEIKGELHAIRKLIDGIKRFFGTFREHQVIVEEVLAEDFFDAHFNLPKIIENKIAA 4533 Query: 131 KPSAIHLSREHFEI 144 + +++ Sbjct: 4534 SVTMTFKPPAFYDV 4547 >gi|224368880|ref|YP_002603042.1| hypothetical protein HRM2_17760 [Desulfobacterium autotrophicum HRM2] gi|259646483|sp|C0QB81|Y1776_DESAH RecName: Full=UPF0365 protein HRM2_17760 gi|223691597|gb|ACN14880.1| putative seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) [Desulfobacterium autotrophicum HRM2] Length = 326 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 41/95 (43%), Gaps = 12/95 (12%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKN----RILIKKIEDIRARRNSNSAQIG 59 + + +NP+ + + + L+ + ILS+D + + + ++E RA +I Sbjct: 189 KMVLENPDLISKTVLSKGLDSGTAYEILSIDIADVDVGKNIGAELETDRAE---ADKKIA 245 Query: 60 QAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 QA AE ++ +K ++ ++ E + Sbjct: 246 QAKAEERRAMAYAMEQEMKARVQEMRAKVVEAEAQ 280 >gi|160883804|ref|ZP_02064807.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483] gi|237722137|ref|ZP_04552618.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|299149166|ref|ZP_07042227.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23] gi|156110889|gb|EDO12634.1| hypothetical protein BACOVA_01776 [Bacteroides ovatus ATCC 8483] gi|229447947|gb|EEO53738.1| threonyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|298512833|gb|EFI36721.1| threonine--tRNA ligase [Bacteroides sp. 3_1_23] Length = 646 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 49/177 (27%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 Q + + + Y EV P + +G K+ D F + Sbjct: 277 LQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMN 336 Query: 238 NLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + EI K LPLR R E + G+ R F + + R Sbjct: 337 CPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E E R++ + + +D + D + W + E Sbjct: 394 EQVKDEFLRVMDIISIVFRSMDFQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIE 450 >gi|126325247|ref|XP_001365673.1| PREDICTED: similar to intersectin long isoform 1 [Monodelphis domestica] Length = 1718 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 39/102 (38%), Gaps = 3/102 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 Q +R + ++ + R + + + ++ R I + ++ ++N + ++ Q E Sbjct: 579 QQLRDQLDEVEK--ETRSKLQEIDIFNNQLKELRE-IHNKQQLQKQKNLEAERLKQKEKE 635 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 ++ K E+ + L++ + + K + Sbjct: 636 RKTVELEKQKEESQRRSQDKQWLDRVQQDEEYQRPKKLHDEE 677 >gi|114665922|ref|XP_001165173.1| PREDICTED: rabaptin, RAB GTPase binding effector protein 1 isoform 3 [Pan troglodytes] Length = 924 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 209 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 266 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 267 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 326 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 327 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 366 >gi|301800167|emb|CBW32772.1| putative chromosome partition protein [Streptococcus pneumoniae OXC141] Length = 1179 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + + + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQTQLFDRLD 481 >gi|169834374|ref|YP_001694677.1| chromosome segregation protein SMC [Streptococcus pneumoniae Hungary19A-6] gi|168996876|gb|ACA37488.1| chromosome segregation protein SMC [Streptococcus pneumoniae Hungary19A-6] Length = 1179 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 481 >gi|148985142|ref|ZP_01818381.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP3-BS71] gi|147922587|gb|EDK73705.1| glucose-6-phosphate 1-dehydrogenase [Streptococcus pneumoniae SP3-BS71] Length = 1179 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + + + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQTQLFDRLD 481 >gi|15669265|ref|NP_248070.1| seryl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661] gi|3122916|sp|Q58477|SYS2_METJA RecName: Full=Type-2 seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|1591725|gb|AAB99075.1| seryl-tRNA synthetase (serS) [Methanocaldococcus jannaschii DSM 2661] Length = 521 Score = 40.1 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 94/292 (32%), Gaps = 57/292 (19%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 K G T + L RAL + +++ + G+ E P L+ E MY + Sbjct: 208 VKKFPGRGQWFYTPPITALFRALEELIVEEVVKKIGFQECLFPKLIPLEIMYKMRYLEGL 267 Query: 216 ADDMFCTTDG---------------------------------RWLIPTSEVSLTNLYSH 242 + M+ L P + Sbjct: 268 PEGMYYVCPPKREPELFKEFVNEMMIKKEIPIEKLKNLLRDPGYVLAPAQCEPFYQFFEG 327 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 E+I+ + F ++R E G A G+ R ++F + E V I E ++ Sbjct: 328 EVIDVDKPIMFFDRSGWTYRWEGGGAR----GLDRVNEFLRVECVWIGSPEFVEETRDKT 383 Query: 303 LSCAEEILKRLDLHYRV-----------VSLCTGDLGFSACKTYDLEVWLAGQNLYRE-- 349 L AE++ ++LDL Y V + F Y++ +WL R+ Sbjct: 384 LKYAEKLAEKLDLEYWVEVGDDPFYLEGRKKEDRGIEFPDVPKYEMRLWLPHIKDERKGV 443 Query: 350 -ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 ++S + G R +D + T +G + R ++ L Y Sbjct: 444 AVTSANVHGTHFVE--GFRIKDYKGRR---VWT-GCTGYGITRWVVGYLAQY 489 >gi|296110429|ref|YP_003620810.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] gi|295831960|gb|ADG39841.1| prolyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154] Length = 571 Score = 40.1 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 9/150 (6%) Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLI----PTSEVSLTNLYSHEIIESK 248 E+ P ++ E +G+ + D++ + + PT E + T L + EI K Sbjct: 67 NEMLVPEVLPAELWQKSGRYATYGPDLYKFKNRQDRDFILGPTHEETYTQLMADEIKSYK 126 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF-WKCELVSITREEDSFTEHERMLSCAE 307 LPL + P FR E R G+LR +F K +E M + Sbjct: 127 KLPLTVYQIQPKFRDE----NRPRFGLLRTREFIMKDAYSFSADQEGLDQTFHAMENAYI 182 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 I R+ + YR + G +G S K + Sbjct: 183 NIFDRIGISYRAIVGDAGAMGGSDSKEFSA 212 >gi|81429332|ref|YP_396333.1| hypothetical protein LSA1720_a [Lactobacillus sakei subsp. sakei 23K] gi|78610975|emb|CAI56027.1| Hypothetical protein (C-terminal fragment), authentic frameshift [Lactobacillus sakei subsp. sakei 23K] Length = 789 Score = 40.1 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 47/134 (35%), Gaps = 9/134 (6%) Query: 5 QWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 + + +N + +L+K + L +L L+E+ I+KI ++ NS S + Sbjct: 322 KLVGENLSGFEESLRKVNNRLNNDVSKLLDLEEE----IEKIPELE---NSLSDIRHKIK 374 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + L + L + + K++ I + + + N+ + ++ Sbjct: 375 IFEDKGLAEKLIKQVNFQKDKNKIQRINKLITDFYKEIQLLMQSNIVADLEKSKNFSSIE 434 Query: 123 ILIRSVGKKPSAIH 136 + + Sbjct: 435 VPNIATKVDREVNK 448 >gi|5257204|gb|AAD41258.1| LRR FLI-I interacting protein 1 [Homo sapiens] Length = 603 Score = 40.1 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 7/82 (8%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN---- 66 + ALK+R E E I L +K I++I D++ +IG + Sbjct: 339 FAEVKEALKQR--EEMLEEIRQLQQKQASSIREISDLQETIEWKDKKIGALERQKEFFDS 396 Query: 67 -LSLVDALKNETSTLKEQLPIL 87 S D L+ E LKE+L Sbjct: 397 VRSERDDLREEVVMLKEELKKH 418 >gi|312382389|gb|EFR27865.1| hypothetical protein AND_04938 [Anopheles darlingi] Length = 701 Score = 40.1 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 36/116 (31%), Gaps = 10/116 (8%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS------- 68 + R + E +L + + + K++E R + + + + Sbjct: 475 AKIHIRRMAKDVEGLLKAEVALKEMQKELEQARLEQENVGKEKMDLERRLREAPTLTSSS 534 Query: 69 ---LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + LK E L+ +L E E ++ C + + + + E Sbjct: 535 SDLELQQLKQEIEMLRSELSRAEVEINDHCWTPPQGLQSWLQLTYELEHKHHIRKR 590 >gi|13541638|ref|NP_111326.1| chromosome segregation ATPase [Thermoplasma volcanium GSS1] gi|14325037|dbj|BAB59963.1| chromosome scaffold protein [smc1] [Thermoplasma volcanium GSS1] Length = 1141 Score = 40.1 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 11/101 (10%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Query: 12 EHLDIALK--KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA---QIGQAIAEGN 66 E + +L+ +R + E ++ +++ L+ + ++ N+ S + Q Sbjct: 334 EEIRKSLESERRERDKLQEEFIAAEDEYNKLVAEAQEKEKE-NATSRVKTKDYQVKISKL 392 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 +++LK + + + + E+ ++ + + Sbjct: 393 NDEINSLKEKLAEINMAIKGKIDRITELEERMEDIGLKVKA 433 >gi|312886823|ref|ZP_07746429.1| DNA gyrase subunit A [Mucilaginibacter paludis DSM 18603] gi|311300650|gb|EFQ77713.1| DNA gyrase subunit A [Mucilaginibacter paludis DSM 18603] Length = 883 Score = 40.1 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 7/89 (7%) Query: 2 LD--IQWIR--QNPEHLDIALKKRHLEPQSEYILSLD-EKNRILIKKIEDIRARRNSNSA 56 LD IQ IR P+ L R + LD R+ + + I+A N Sbjct: 397 LDEVIQLIRSSNTPDEARDGLMTRFNLSDIQARAILDMTLRRLTGLERDKIKAEYNELMK 456 Query: 57 QIGQAIAEGNLS--LVDALKNETSTLKEQ 83 I + ++ +KNE +KE+ Sbjct: 457 LIDYLKSILADEGLRMEIIKNELIEIKEK 485 >gi|46249758|gb|AAH68458.1| Ezrin [Homo sapiens] Length = 586 Score = 40.1 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 351 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 410 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 411 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 455 >gi|293372832|ref|ZP_06619210.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|298480838|ref|ZP_06999033.1| threonine--tRNA ligase [Bacteroides sp. D22] gi|292632207|gb|EFF50807.1| threonine--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|295085227|emb|CBK66750.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase [Bacteroides xylanisolvens XB1A] gi|298272861|gb|EFI14427.1| threonine--tRNA ligase [Bacteroides sp. D22] Length = 646 Score = 40.1 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 49/177 (27%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 Q + + + Y EV P + +G K+ D F + Sbjct: 277 LQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMN 336 Query: 238 NLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + EI K LPLR R E + G+ R F + + R Sbjct: 337 CPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E E R++ + + +D + D + W + E Sbjct: 394 EQVKDEFLRVMDIISIVFRSMDFQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIE 450 >gi|298676000|ref|YP_003727750.1| chromosome segregation protein SMC [Methanohalobium evestigatum Z-7303] gi|298288988|gb|ADI74954.1| chromosome segregation protein SMC [Methanohalobium evestigatum Z-7303] Length = 1174 Score = 40.1 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 39/89 (43%), Gaps = 4/89 (4%) Query: 7 IRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAI 62 I+++ E + + + + + I +D + R + I+D +++ ++I + Sbjct: 296 IKKDIEEIRGEISRCNGSIEIAENEIQDIDTRRRKTLVDIDDAKSKVEELESKINDEEIR 355 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEE 91 E S + KNE L+ ++ ++ + Sbjct: 356 KESINSELSERKNELKLLQSKINDVDAKF 384 >gi|212276078|ref|NP_001131022.1| leucine-rich repeat flightless-interacting protein 1 isoform 1 [Homo sapiens] Length = 640 Score = 40.1 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 7/82 (8%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN---- 66 + ALK+R E E I L +K I++I D++ +IG + Sbjct: 362 FAEVKEALKQR--EEMLEEIRQLQQKQASSIREISDLQETIEWKDKKIGALERQKEFFDS 419 Query: 67 -LSLVDALKNETSTLKEQLPIL 87 S D L+ E LKE+L Sbjct: 420 VRSERDDLREEVVMLKEELKKH 441 >gi|184201296|ref|YP_001855503.1| glycyl-tRNA synthetase [Kocuria rhizophila DC2201] gi|183581526|dbj|BAG29997.1| glycyl-tRNA synthetase [Kocuria rhizophila DC2201] Length = 460 Score = 40.1 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 37/108 (34%), Gaps = 8/108 (7%) Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + +FR+E + R +F + E+ +++ + + + L + Sbjct: 189 QIGKAFRNEI----TPGNFIFRTREFEQMEIEYFIHPDEAKKYFDEWVEACWDWFVDLGV 244 Query: 316 ---HYRVVSLCTGDLGFSACKTYDLEVWLAGQN-LYREISSCSTCGNF 359 + R + D + T D+E Q + E+ + +F Sbjct: 245 NPDNMRRYDVPADDRAHYSDGTIDIEYRFGFQGSEWGELMGVANRTDF 292 >gi|119591528|gb|EAW71122.1| leucine rich repeat (in FLII) interacting protein 1, isoform CRA_a [Homo sapiens] Length = 642 Score = 40.1 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 7/82 (8%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN---- 66 + ALK+R E E I L +K I++I D++ +IG + Sbjct: 362 FAEVKEALKQR--EEMLEEIRQLQQKQASSIREISDLQETIEWKDKKIGALERQKEFFDS 419 Query: 67 -LSLVDALKNETSTLKEQLPIL 87 S D L+ E LKE+L Sbjct: 420 VRSERDDLREEVVMLKEELKKH 441 >gi|91078510|ref|XP_969463.1| PREDICTED: similar to CG4557 CG4557-PA [Tribolium castaneum] gi|270003849|gb|EFA00297.1| hypothetical protein TcasGA2_TC003130 [Tribolium castaneum] Length = 1232 Score = 40.1 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 10/93 (10%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYIL-SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG 65 +R+ E R + + ++ DE + L ++ E + ++ +S I + A+ Sbjct: 696 LRKQLEQSKQEAATRLSKSDLDSLISEKDEIIKELREEGEKLSKQQLQHSNIIKKLRAKE 755 Query: 66 N---------LSLVDALKNETSTLKEQLPILEK 89 ++ L +E LK L E+ Sbjct: 756 KENESTIKHLKETIEDLSSEADRLKRSLTAKEE 788 >gi|237716078|ref|ZP_04546559.1| threonyl-tRNA synthetase [Bacteroides sp. D1] gi|262407690|ref|ZP_06084238.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|294643798|ref|ZP_06721596.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294808458|ref|ZP_06767211.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] gi|229443725|gb|EEO49516.1| threonyl-tRNA synthetase [Bacteroides sp. D1] gi|262354498|gb|EEZ03590.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|292640887|gb|EFF59107.1| threonine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294444386|gb|EFG13100.1| threonine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] Length = 646 Score = 40.1 bits (92), Expect = 0.65, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 49/177 (27%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 Q + + + Y EV P + +G K+ D F + Sbjct: 277 LQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMN 336 Query: 238 NLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + EI K LPLR R E + G+ R F + + R Sbjct: 337 CPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 E E R++ + + +D + D + W + E Sbjct: 394 EQVKDEFLRVMDIISIVFRSMDFQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIE 450 >gi|224130056|ref|XP_002328643.1| predicted protein [Populus trichocarpa] gi|222838819|gb|EEE77170.1| predicted protein [Populus trichocarpa] Length = 914 Score = 40.1 bits (92), Expect = 0.65, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 2/99 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I SL+ K L ++ + ++ S + + Sbjct: 393 IDLVDEACANVRVQLDSQPEEIDSLERKRMQLEVELHALEKEKDKASKARLAEVVKELDD 452 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 L D L+ K++ +++ + S Sbjct: 453 LRDKLQPLLMKYKKEKERIDEIRRLKQKREEIHFSIQEA 491 >gi|194755240|ref|XP_001959900.1| GF13100 [Drosophila ananassae] gi|190621198|gb|EDV36722.1| GF13100 [Drosophila ananassae] Length = 2338 Score = 40.1 bits (92), Expect = 0.65, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 36/104 (34%), Gaps = 9/104 (8%) Query: 6 WIRQNPEHLDIALKK-------RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA-- 56 + N E + L++ R + + + L + R ++ E R N Sbjct: 815 LLLNNLEFIKANLERSETEGRLRLEQRLDDTVRELAAQRRHFQEEEEKFRESINEFRRQT 874 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + + E + + E ++E+L + E+ L++ Sbjct: 875 ETAIKLKEEEKQQAEKWQAELLNVREELVQKNNQVTELSKKLQE 918 >gi|260903902|ref|ZP_05912224.1| glycyl-tRNA synthetase [Brevibacterium linens BL2] Length = 459 Score = 40.1 bits (92), Expect = 0.65, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 37/108 (34%), Gaps = 8/108 (7%) Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + +FR+E + R +F + EL R +++ + + L + Sbjct: 188 QIGKAFRNEI----TPGNFIFRTREFEQMELEYFVRPDEADDYYREWVEACWNWFLDLGI 243 Query: 316 H---YRVVSLCTGDLGFSACKTYDLEVWLAGQN-LYREISSCSTCGNF 359 R + + D + T D+E Q + E+ + ++ Sbjct: 244 SEDNVRRLDVPEDDRAHYSSGTIDVEYRFGFQGSEWGELMGVANRTDY 291 >gi|297472995|ref|XP_002707905.1| PREDICTED: rCG28728-like [Bos taurus] gi|296489252|gb|DAA31365.1| rCG28728-like [Bos taurus] Length = 631 Score = 40.1 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 6/93 (6%) Query: 6 WIRQ--NPEHLDIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +R+ N E + +++R + + +D + L ++ E + + + + Sbjct: 504 LLREKQNEEEQKMEVQERSFKENLAQVQEKMDRERENLRREQETMLEHKLKMQKE---LL 560 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 EG+ +AL E LKE + EK + Sbjct: 561 TEGSKKEAEALSKEIDQLKEGIQTTEKSFNISD 593 >gi|259046635|ref|ZP_05737036.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] gi|259036800|gb|EEW38055.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] Length = 1189 Score = 40.1 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 7/108 (6%) Query: 18 LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS--AQIGQAIAEGNLSLVDALKN 75 L+ R+ + ++ E+ LI+K+E + +R Q + E N + A Sbjct: 276 LEARNEDLDAKQ-----EEYVELIQKVEQLDGQRKVFEQRRQFAERSDEENQEALAAALR 330 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 E ++E+L +LEK + E LK + + E + S E++ Sbjct: 331 ELEEVEEKLALLEKNQVERKIELKNVEESWSQLVEELDQLSQSNEESV 378 >gi|221504653|gb|EEE30326.1| SMC protein, putative [Toxoplasma gondii VEG] Length = 1200 Score = 40.1 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 13/92 (14%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIK---KIEDIRARRNSNSAQIGQ 60 +Q +RQ E ++ L KRH E + R L +ED++ + ++ + Sbjct: 277 LQRVRQKKEEVEKLLAKRHSEEK--------TARRDLKLFSDALEDLKKEEQKLAKKLAE 328 Query: 61 AIAEG--NLSLVDALKNETSTLKEQLPILEKE 90 A S +A + E +KE L EK+ Sbjct: 329 KRASRLSETSHAEAAEEEVKRVKEALENAEKK 360 >gi|210622530|ref|ZP_03293223.1| hypothetical protein CLOHIR_01171 [Clostridium hiranonis DSM 13275] gi|210154165|gb|EEA85171.1| hypothetical protein CLOHIR_01171 [Clostridium hiranonis DSM 13275] Length = 1184 Score = 40.1 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 14/89 (15%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSL-------DEKNRILIKKIEDIRARRNSNS 55 DI I + KKR ++ + E I L DE + +++KIE + +++ Sbjct: 303 DINLITE-----KSNNKKREIDRKKEEIEKLSNLSEKNDEDKKEILQKIEILSSKKEELE 357 Query: 56 A--QIGQAIAEGNLSLVDALKNETSTLKE 82 A + A + +D ++ + LK+ Sbjct: 358 AALEKSGAKNKEQKENIDNVEKKIDELKD 386 >gi|141795779|gb|AAI39695.1| LOC100005466 protein [Danio rerio] Length = 619 Score = 40.1 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 35/333 (10%), Positives = 76/333 (22%), Gaps = 31/333 (9%) Query: 9 QNPEHLDIALKK-----RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG---- 59 + + L L+ R + + +L D K + ++ E+++ + N S IG Sbjct: 307 EQVDKLRKELRNARDRERRQKKTMKSLLE-DLKKKNMLT--EELQEQLNFFSELIGGNDE 363 Query: 60 -QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + GN V A K + + K + + ++ P G S Sbjct: 364 SEEERAGNKPRVRAKKKKRNRNTFICTECGKTLASIHNLKTHMMIHTGGKPFPCDQCGKS 423 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + + + + + ++ Sbjct: 424 FRQPSDHMQHMMTHTGEKPYKCNVCDKAFASASNLKLHLRVHTKEKPYSCSVCGKSFSQS 483 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 V G T + + E + Sbjct: 484 SSLKTHQKIHTGVKEHVCLEC--GKSFYTGQNL---KKHQRIHTGEKPYKCSYCERGFSQ 538 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L + E + + ++ H E + E +T Sbjct: 539 LDPMKAHERIHTGEKPYECSHC-----------SKRFNELHNLKMHERIHTG--EKPYTC 585 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 + A+ + CT L F+ Sbjct: 586 DLCGKAFAQLSNLKKHTSAHEEKNCTHSLQFNN 618 >gi|21227935|ref|NP_633857.1| phosphoserine phosphatase [Methanosarcina mazei Go1] gi|20906357|gb|AAM31529.1| Phosphoserine phosphatase [Methanosarcina mazei Go1] Length = 320 Score = 40.1 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 11/97 (11%) Query: 4 IQWIRQNPEHLDIALKKRHLEP-----QSEYILS----LDEKNRILIKKIEDIRARRNSN 54 + +R E + L + + + + L+++ + + K + +R RR+ Sbjct: 27 VNELRSRIEKSERQLASIFKDLKINRTDIDELKAKRDTLNQQVKERVAKAQALRDRRDEI 86 Query: 55 SAQIG--QAIAEGNLSLVDALKNETSTLKEQLPILEK 89 + QIG + G S L + + LKE+ K Sbjct: 87 NKQIGEYKEKRSGINSKTQELFSGIAELKEKRDECNK 123 >gi|332022216|gb|EGI62531.1| Meiotic nuclear division protein 1-like protein [Acromyrmex echinatior] Length = 205 Score = 40.1 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 2/104 (1%) Query: 13 HLDIALKKRHLEPQSEYILSLD-EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 ++ L+K E Q E L D E+ R L+++IE ++ QI + + + + Sbjct: 95 EVEFKLEKLKEEIQKEKELKNDTEEKRKLLEEIEQLKKEEQEIKNQIAK-FSNVDPEAIA 153 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + + K+ I + S K ++ I Sbjct: 154 EMNKKAQKYKDGTNIWTDNIFSIQSWCKNKFCISEQDLNKQFNI 197 >gi|330803594|ref|XP_003289789.1| hypothetical protein DICPUDRAFT_154248 [Dictyostelium purpureum] gi|325080100|gb|EGC33670.1| hypothetical protein DICPUDRAFT_154248 [Dictyostelium purpureum] Length = 479 Score = 40.1 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 6/77 (7%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 + I L+E+N+ L+ ++E ++ N Q N ++ L +E LK+Q Sbjct: 236 DHLINQINKLNEQNKELMNQLEILK-EHNQQ-----QLSQSNNEDQINQLSHENKQLKDQ 289 Query: 84 LPILEKEEHEVCSSLKK 100 L L+++ + L + Sbjct: 290 LESLKQQYRDKEELLNQ 306 >gi|221481578|gb|EEE19960.1| structural maintenance of chromosome protein, putative [Toxoplasma gondii GT1] Length = 1200 Score = 40.1 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 13/92 (14%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIK---KIEDIRARRNSNSAQIGQ 60 +Q +RQ E ++ L KRH E + R L +ED++ + ++ + Sbjct: 277 LQRVRQKKEEVEKLLAKRHSEEK--------TARRDLKLFSDALEDLKKEEQKLAKKLAE 328 Query: 61 AIAEG--NLSLVDALKNETSTLKEQLPILEKE 90 A S +A + E +KE L EK+ Sbjct: 329 KRASRLSETSHAEAAEEEVKRVKEALENAEKK 360 >gi|237843805|ref|XP_002371200.1| structural maintenance of chromosomes protein, putative [Toxoplasma gondii ME49] gi|211968864|gb|EEB04060.1| structural maintenance of chromosomes protein, putative [Toxoplasma gondii ME49] Length = 1217 Score = 40.1 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 13/92 (14%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIK---KIEDIRARRNSNSAQIGQ 60 +Q +RQ E ++ L KRH E + R L +ED++ + ++ + Sbjct: 294 LQRVRQKKEEVEKLLAKRHSEEK--------TARRDLKLFSDALEDLKKEEQKLAKKLAE 345 Query: 61 AIAEGNLSL--VDALKNETSTLKEQLPILEKE 90 A +A + E +KE L EK+ Sbjct: 346 KRASRLSETSHAEAAEEEVKRVKEALENAEKK 377 >gi|146417372|ref|XP_001484655.1| hypothetical protein PGUG_02384 [Meyerozyma guilliermondii ATCC 6260] Length = 444 Score = 40.1 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 35/87 (40%), Gaps = 12/87 (13%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEK-----NRILIKKIEDIRARRNSNS 55 M ++ +R++ ++ + ++ + L +K NR + + E I+A + + Sbjct: 148 MSQLRKVRKDFGAVEKTQES--IDADKAKVAELKKKLSQVQNREIQAQFEKIQAELDELN 205 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKE 82 +G + L + + L++ Sbjct: 206 K-----KNQGVSEKRNELFKKRNQLRK 227 >gi|114665930|ref|XP_001165033.1| PREDICTED: rabaptin, RAB GTPase binding effector protein 1 isoform 1 [Pan troglodytes] Length = 859 Score = 40.1 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|255692010|ref|ZP_05415685.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565] gi|260622256|gb|EEX45127.1| threonine--tRNA ligase [Bacteroides finegoldii DSM 17565] Length = 646 Score = 40.1 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 70/267 (26%), Gaps = 17/267 (6%) Query: 97 SLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRA 156 I I + + +L R G + E+ + E D + Sbjct: 187 MTTAPIKAIKLTTVAGAYWRGQEDRKMLTRIYGITFPKKKMLDEYLVLLEEAKKRDHRKI 246 Query: 157 TKLSG---ARFSVLTGHLAHLERAL-----GQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 K +V G L + Q + + + Y EV P + Sbjct: 247 GKEMQLFMFSETVGKGLPMWLPKGTALRLRLQEFLRRIQTRYDYQEVITPPIGNKLLYVT 306 Query: 209 TGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEII-----ESKSLPLRFTTLAPSFR 262 +G K+ D F + + EI K LPLR R Sbjct: 307 SGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKNFPRSYKDLPLRIAEFGTVCR 366 Query: 263 SEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSL 322 E + G+ R F + + R + E R++ + + ++ + Sbjct: 367 YEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRVMDIISIVFRSMNFQNFEAQI 423 Query: 323 CTGDLGFSACKTYDLEVWLAGQNLYRE 349 D + W + E Sbjct: 424 SLRDKVNREKYIGSDDNWEKAEQAIIE 450 >gi|190346246|gb|EDK38286.2| hypothetical protein PGUG_02384 [Meyerozyma guilliermondii ATCC 6260] Length = 444 Score = 40.1 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 35/87 (40%), Gaps = 12/87 (13%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEK-----NRILIKKIEDIRARRNSNS 55 M ++ +R++ ++ + ++ + L +K NR + + E I+A + + Sbjct: 148 MSQLRKVRKDFGAVEKTQES--IDADKAKVAELKKKLSQVQNREIQAQFEKIQAELDELN 205 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKE 82 +G + L + + L++ Sbjct: 206 K-----KNQGVSEKRNELFKKRNQLRK 227 >gi|169612041|ref|XP_001799438.1| hypothetical protein SNOG_09135 [Phaeosphaeria nodorum SN15] gi|160702424|gb|EAT83327.2| hypothetical protein SNOG_09135 [Phaeosphaeria nodorum SN15] Length = 1240 Score = 40.1 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 5/71 (7%) Query: 4 IQWIRQNPEHLDIALKK-RHLEPQSEY-ILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 I+ IR + L+ R++ P E I + ++ + ++ +R R I Sbjct: 928 IKDIRDELNMIAKVLEDQRNVLPDLETSIQDIYKERKESQQE---LRKRFKDMLKTIDTH 984 Query: 62 IAEGNLSLVDA 72 I + + A Sbjct: 985 IRDLERMDIQA 995 >gi|261289249|ref|XP_002603067.1| hypothetical protein BRAFLDRAFT_63300 [Branchiostoma floridae] gi|229288384|gb|EEN59079.1| hypothetical protein BRAFLDRAFT_63300 [Branchiostoma floridae] Length = 1649 Score = 40.1 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 2/74 (2%) Query: 38 RILIKKIEDIRARRNSNSAQIGQAIAE--GNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 R L K+ E + N + + + E + K E + LK++ E + + + Sbjct: 716 RELNKEKEKTKQEVNELNKEKEKTKQEVNELNKEKEKTKQEVNELKKKKETTESDVNGLK 775 Query: 96 SSLKKLISCIPNVP 109 + LKK+ + Sbjct: 776 NELKKMKKEMQGEV 789 >gi|195023900|ref|XP_001985771.1| GH20904 [Drosophila grimshawi] gi|193901771|gb|EDW00638.1| GH20904 [Drosophila grimshawi] Length = 1694 Score = 40.1 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 13/101 (12%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQIG 59 D R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1222 DPDMERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIRELE 1271 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 Q E +LV+ + S + E+L ++ E K+ Sbjct: 1272 QLQNEKRKALVEHEHAKLSEIDERLKAELRDWREQLVPRKQ 1312 >gi|189069151|dbj|BAG35489.1| unnamed protein product [Homo sapiens] Length = 586 Score = 40.1 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 351 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 410 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 411 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 455 >gi|31283|emb|CAA35893.1| unnamed protein product [Homo sapiens] Length = 586 Score = 40.1 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 351 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 410 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 411 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 455 >gi|327310631|ref|YP_004337528.1| hypothetical protein TUZN_0726 [Thermoproteus uzoniensis 768-20] gi|326947110|gb|AEA12216.1| hypothetical protein TUZN_0726 [Thermoproteus uzoniensis 768-20] Length = 423 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 7/113 (6%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD++ ++Q E + L++R + L+ K + K++++ RR I Q Sbjct: 259 LDLKKMQQELEAKRLELEQREA-----RVRELEVKGKEAEAKLQELERRRAELER-IEQD 312 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 I E ++ L + ++E L E E ++ +++ + + Sbjct: 313 I-EAKKKELEELVAKYKNIEEALKNKEAEYSKIEDYVRRKEMELMDGLAPFAR 364 >gi|303229894|ref|ZP_07316670.1| peptidase, M23 family [Veillonella atypica ACS-134-V-Col7a] gi|302515450|gb|EFL57416.1| peptidase, M23 family [Veillonella atypica ACS-134-V-Col7a] Length = 398 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 10/87 (11%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ R + E L E ++ L++ +IE +A RN A Sbjct: 164 IKKERADIEAHKQKL-----EADRAKLVELEKSALAKQAEIEQKKAERNVV-----LQKA 213 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKE 90 + + + E + Q+ + KE Sbjct: 214 QNDRATAMQAIEELNASSAQVSAMLKE 240 >gi|195430134|ref|XP_002063111.1| GK21555 [Drosophila willistoni] gi|194159196|gb|EDW74097.1| GK21555 [Drosophila willistoni] Length = 2361 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 40/104 (38%), Gaps = 9/104 (8%) Query: 6 WIRQNPEHLDIALKK-------RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA-- 56 + N E++ L++ R + + + L + R ++ E R N Sbjct: 820 LLLNNLEYIKSNLERSEAEGRLRVEQRLDDTLRELAAQRRHFQEEEEKFRETVNELKRQT 879 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + + E + + E T++E+L ++ +E+ L++ Sbjct: 880 ETAIKLKEEEKQQAEKWQAELVTVREELAQKIEQLNELSKKLQE 923 >gi|146414425|ref|XP_001483183.1| hypothetical protein PGUG_05138 [Meyerozyma guilliermondii ATCC 6260] Length = 244 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 1/78 (1%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNET-STLKEQLPILEKEEH 92 D + + L + +++ +RN S Q QA G+ S L ++ L+E K Sbjct: 24 DSEYKRLRAQADELYQKRNKLSQQSQQAYKAGDGSKAHELSEQSHRALEEAEKCNRKAAE 83 Query: 93 EVCSSLKKLISCIPNVPL 110 V + + Sbjct: 84 YVFRENNEDSAEDEIDLH 101 >gi|71983162|gb|AAZ57431.1| structural maintenance of chromosome 2 [Toxoplasma gondii] Length = 1186 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 13/92 (14%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIK---KIEDIRARRNSNSAQIGQ 60 +Q +RQ E ++ L KRH E + R L +ED++ + ++ + Sbjct: 317 LQRVRQKKEEVEKLLAKRHSEEK--------TARRDLKLFSDALEDLKKEEQKLAKKLAE 368 Query: 61 AIAEGNLSL--VDALKNETSTLKEQLPILEKE 90 A +A + E +KE L EK+ Sbjct: 369 KRASRLSETSHAEAAEEEVKRVKEALENAEKK 400 >gi|315045776|ref|XP_003172263.1| hypothetical protein MGYG_04851 [Arthroderma gypseum CBS 118893] gi|311342649|gb|EFR01852.1| hypothetical protein MGYG_04851 [Arthroderma gypseum CBS 118893] Length = 1465 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 34/108 (31%), Gaps = 5/108 (4%) Query: 34 DEKNR---ILIKKIEDIRARRNSNSAQI--GQAIAEGNLSLVDALKNETSTLKEQLPILE 88 DE R L ++ E +AR + Q+ G+ + + E + +L Sbjct: 1056 DETRRQEEELAREKEAAQARLKALEEQVRQGKIKKQEQKRRKQQAEQEAREKEAKLAAQR 1115 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 E ++L + ++ EE + + S + Sbjct: 1116 AELEAAQERERELQRQLESLGDEESSSDDEGPGFVTPQDTTPTQSQVF 1163 >gi|297699776|ref|XP_002826948.1| PREDICTED: rab GTPase-binding effector protein 1-like isoform 3 [Pongo abelii] Length = 819 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 104 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 161 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 162 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 221 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 222 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 261 >gi|297699774|ref|XP_002826947.1| PREDICTED: rab GTPase-binding effector protein 1-like isoform 2 [Pongo abelii] Length = 829 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|291225416|ref|XP_002732696.1| PREDICTED: RAS-associated protein RAB13-like [Saccoglossus kowalevskii] Length = 719 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 5/102 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKN-RILIKKIEDIRARRNSNSAQIGQA 61 DI+ R + + L+ AL+ R E + L E+ + + E I +I + Sbjct: 180 DIRKARIDSDELESALRNRAYAHD-EEVRKLYEEMEIQIKAEKEKILNEEKGKERKIREE 238 Query: 62 IAEG---NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 +++ V L + L+ +L + + E+ + ++ Sbjct: 239 MSQELLRKEQEVQELLQKQKDLETKLQEMNATQSEIATENEE 280 >gi|194387140|dbj|BAG59936.1| unnamed protein product [Homo sapiens] Length = 819 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 104 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 161 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 162 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 221 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 222 LLKQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 261 >gi|134152674|ref|NP_001077054.1| rab GTPase-binding effector protein 1 isoform 2 [Homo sapiens] gi|119610751|gb|EAW90345.1| rabaptin, RAB GTPase binding effector protein 1, isoform CRA_c [Homo sapiens] Length = 829 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|21614499|ref|NP_003370.2| ezrin [Homo sapiens] gi|161702986|ref|NP_001104547.1| ezrin [Homo sapiens] gi|332825349|ref|XP_003311612.1| PREDICTED: ezrin isoform 1 [Pan troglodytes] gi|125987826|sp|P15311|EZRI_HUMAN RecName: Full=Ezrin; AltName: Full=Cytovillin; AltName: Full=Villin-2; AltName: Full=p81 gi|15530243|gb|AAH13903.1| Ezrin [Homo sapiens] gi|66347778|emb|CAI95307.1| villin 2 (ezrin) [Homo sapiens] gi|119568031|gb|EAW47646.1| villin 2 (ezrin), isoform CRA_a [Homo sapiens] gi|119568032|gb|EAW47647.1| villin 2 (ezrin), isoform CRA_a [Homo sapiens] gi|123984669|gb|ABM83680.1| villin 2 (ezrin) [synthetic construct] gi|123998668|gb|ABM86977.1| villin 2 (ezrin) [synthetic construct] gi|307684700|dbj|BAJ20390.1| ezrin [synthetic construct] Length = 586 Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 351 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 410 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 411 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 455 >gi|291543338|emb|CBL16447.1| glycyl-tRNA synthetase [Ruminococcus sp. 18P13] Length = 459 Score = 40.1 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 15/195 (7%) Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL 228 + ++ + + + + + M+ T Q + +L Sbjct: 113 NPAGWSNEQMMNYIKEKEIPCPSCGKKNFTDIRQFNLMFKTFQGVTED-----SKSELYL 167 Query: 229 IP-TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 P T++ N + + K +P + SFR+E + R +F + EL Sbjct: 168 RPETAQGIFVNFANIQRTTRKKIPFGVAQVGKSFRNEI----TPGNFIFRVREFEQMELE 223 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQ 344 + + S + L L + + L D L F + T D E Sbjct: 224 FFCKPGTDLEWFDYWRSFCKNWLLSLHIKEENLRLRDHDPEELCFYSKATTDFEYLFPF- 282 Query: 345 NLYREISSCSTCGNF 359 + E+ + ++ Sbjct: 283 -GWGELWGVADRTDY 296 >gi|190348568|gb|EDK41040.2| hypothetical protein PGUG_05138 [Meyerozyma guilliermondii ATCC 6260] Length = 244 Score = 40.1 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 1/78 (1%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNET-STLKEQLPILEKEEH 92 D + + L + +++ +RN S Q QA G+ S L ++ L+E K Sbjct: 24 DSEYKRLRAQADELYQKRNKLSQQSQQAYKAGDGSKAHELSEQSHRALEEAEKCNRKAAE 83 Query: 93 EVCSSLKKLISCIPNVPL 110 V + + Sbjct: 84 YVFRENNEDSAEDEIDLH 101 >gi|149724871|ref|XP_001502902.1| PREDICTED: rabaptin, RAB GTPase binding effector protein 1 [Equus caballus] Length = 884 Score = 40.1 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 169 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 226 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 227 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 286 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 287 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 326 >gi|114665934|ref|XP_001165137.1| PREDICTED: rab GTPase-binding effector protein 1 isoform 2 [Pan troglodytes] Length = 819 Score = 40.1 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 104 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 161 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 162 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 221 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 222 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 261 >gi|242016037|ref|XP_002428645.1| DNA topoisomerase, putative [Pediculus humanus corporis] gi|212513308|gb|EEB15907.1| DNA topoisomerase, putative [Pediculus humanus corporis] Length = 961 Score = 40.1 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 4/114 (3%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 L KIE R + N ++ A G+ K + LKEQL LE +E + + Sbjct: 849 NLKAKIEAKREQINEIKKEVKNAKRNGDSGTEAKKKKQLDRLKEQLLKLEVQETDKEENK 908 Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 + L+ + +V + R+ F + D Sbjct: 909 TIALGTSKLNYLD----PRISVAWCKKYNVPIEKIYNKTQRDKFRWAIDMAGPD 958 >gi|294656308|ref|XP_458572.2| DEHA2D02398p [Debaryomyces hansenii CBS767] gi|199431370|emb|CAG86704.2| DEHA2D02398p [Debaryomyces hansenii] Length = 244 Score = 40.1 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 29/79 (36%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + +Y + D + + L K +++ ++N S Q A G+ S L ++ + Sbjct: 12 GFDNTRDYNHATDNQYKQLRAKADELYRKKNQLSQQSQNAYQSGDKSKAHDLSEQSKKIL 71 Query: 82 EQLPILEKEEHEVCSSLKK 100 Q ++ E Sbjct: 72 SQAENYNRQAAEYVFRENN 90 >gi|324511744|gb|ADY44884.1| TBC1 domain family member 2B [Ascaris suum] Length = 464 Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 60/185 (32%), Gaps = 15/185 (8%) Query: 10 NPEHLD--IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 N E + + R E I L+E+ + L + ++A +N+ + I + Sbjct: 16 NAEEVRYLRIINNRQK----ERIQELNEEKKRLTVETSQLKAYQNATAEAINDNFKASLI 71 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 + L E L E+ ++ ++ + L + + L++S Sbjct: 72 TQNKFLNAEVLRLSERSEAEQRTIKKLKKEKEDLEEDMNS---------FRREYVFLLQS 122 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 + P + S + ++ G + R +L A +D++ Sbjct: 123 CIRIPLSDQHSIDVLQVKLLGGDVHKKRVLRLLEEARITDPTLPTFECVAGLGNYVDMYG 182 Query: 188 SEHGY 192 H + Sbjct: 183 YRHSF 187 >gi|261403498|ref|YP_003247722.1| seryl-tRNA synthetase [Methanocaldococcus vulcanius M7] gi|261370491|gb|ACX73240.1| seryl-tRNA synthetase [Methanocaldococcus vulcanius M7] Length = 520 Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 95/292 (32%), Gaps = 57/292 (19%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 K G T + L RAL + +++ + G+ E P L+ E MY + Sbjct: 208 IKKFPGRGQWFYTPPITALFRALEELIVEEIVKKIGFQECLFPKLIPLEVMYKMRYLEGL 267 Query: 216 ADDMFCTTDG---------------------------------RWLIPTSEVSLTNLYSH 242 + M+ L P + Sbjct: 268 PEGMYYVCPPKREPELFKEFVNEMMIKKEIPIEKLKNLLRDPGYVLAPAQCEPFYQFFEG 327 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 E+I+ + F ++R E G A G+ R ++F + E V I E ++ Sbjct: 328 EVIDVDKPIMFFDKSGWTYRWEGGGAR----GLDRVNEFLRVECVWIGSPEFVEETRDKT 383 Query: 303 LSCAEEILKRLDLHYRV-----------VSLCTGDLGFSACKTYDLEVWLAGQNLYRE-- 349 L AE++ ++LDL Y V + F Y++ +WL R+ Sbjct: 384 LKYAEKLAEKLDLEYWVEVGDDPFYLEGRKKEDRGIEFPDVPKYEMRLWLPHIKDERKGV 443 Query: 350 -ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 ++S + G R +D ++ T +G + R ++ L Y Sbjct: 444 AVTSANVHGTHFVE--GFRIKDYKNRK---VWT-GCTGYGITRWVVGYLAQY 489 >gi|158320277|ref|YP_001512784.1| hypothetical protein Clos_1242 [Alkaliphilus oremlandii OhILAs] gi|172048002|sp|A8MG60|Y1242_ALKOO RecName: Full=UPF0365 protein Clos_1242 gi|158140476|gb|ABW18788.1| band 7 protein [Alkaliphilus oremlandii OhILAs] Length = 333 Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 16/100 (16%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLD------EKNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + + L+ + ILS+D +N + + A + Sbjct: 190 KDVLENPDSISKMVLGKGLDAGTAFEILSIDIADIDIARNIGAQLQTDQAEAD-----KR 244 Query: 58 IGQAIAEGNLSLV----DALKNETSTLKEQLPILEKEEHE 93 I QA AE ++ +K +K ++ E E Sbjct: 245 IAQAKAEEKRAMAVAREQEMKAAVIEMKAKVVEAEAEVPR 284 >gi|307176133|gb|EFN65831.1| Meiotic nuclear division protein 1-like protein [Camponotus floridanus] Length = 205 Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 2/100 (2%) Query: 17 ALKKRHLEPQSEYILSLD-EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+K E Q E L D E+ RIL++++E ++ QI + + N + +K Sbjct: 99 KLQKLKEEIQKEKELKNDTEERRILLEEVECLKKEEQEIQKQIAK-FSVINPEEIAEIKR 157 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + K+ I + S + + ++ I Sbjct: 158 KAQRAKDLANIWTDNIFAIQSWSRTKFNISEQDLNKQFNI 197 >gi|189054344|dbj|BAG36864.1| unnamed protein product [Homo sapiens] Length = 862 Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|114665932|ref|XP_001165242.1| PREDICTED: rab GTPase-binding effector protein 1 isoform 4 [Pan troglodytes] Length = 829 Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|114665926|ref|XP_511995.2| PREDICTED: rabaptin, RAB GTPase binding effector protein 1 isoform 7 [Pan troglodytes] Length = 884 Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|221130996|ref|XP_002167357.1| PREDICTED: similar to nonmuscle myosin II [Hydra magnipapillata] Length = 1906 Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 12/93 (12%) Query: 7 IRQNPEHLDIALKKRHLEPQSE------YILSLDEKNRILIKKIED----IRARRNSNSA 56 + + E K+ + E +S+ I LD+ + L ++D + RN+ S Sbjct: 1336 LLEEAESARQKQKRENEELRSDNERFQSEISKLDKARKKLQGDLDDVTVLMERERNNASQ 1395 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 A + L+ K+ + L + +EK Sbjct: 1396 M--AAKQKKFDQLLSEEKSRSQALASERDNVEK 1426 >gi|31377798|ref|NP_004694.2| rab GTPase-binding effector protein 1 isoform 1 [Homo sapiens] gi|116242743|sp|Q15276|RABE1_HUMAN RecName: Full=Rab GTPase-binding effector protein 1; AltName: Full=Rabaptin-4; AltName: Full=Rabaptin-5; AltName: Full=Rabaptin-5alpha; AltName: Full=Renal carcinoma antigen NY-REN-17 gi|27469680|gb|AAH41700.1| RABEP1 protein [Homo sapiens] gi|119610749|gb|EAW90343.1| rabaptin, RAB GTPase binding effector protein 1, isoform CRA_a [Homo sapiens] Length = 862 Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|50286419|ref|XP_445638.1| hypothetical protein [Candida glabrata CBS 138] gi|49524943|emb|CAG58549.1| unnamed protein product [Candida glabrata] Length = 1170 Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 42/107 (39%), Gaps = 2/107 (1%) Query: 18 LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNET 77 ++ R+ E + + +L++ + + + + A + ++ + + LK E Sbjct: 743 MQNRNGEIE-NEVKTLEDSTKQKMLENSSLEAEIEKLRKDM-VDFSKNKGAKLKELKAEV 800 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 L EQ+ LE E ++ + +K+ + E S + + Sbjct: 801 HELNEQIKDLESESEKLNDTYEKIKVETEQIANEIDTDTKSLDSTVQ 847 >gi|297699772|ref|XP_002826946.1| PREDICTED: rab GTPase-binding effector protein 1-like isoform 1 [Pongo abelii] Length = 862 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|297679515|ref|XP_002817572.1| PREDICTED: ezrin-like isoform 1 [Pongo abelii] gi|332245298|ref|XP_003271797.1| PREDICTED: ezrin [Nomascus leucogenys] Length = 586 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 351 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 410 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 411 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 455 >gi|242373870|ref|ZP_04819444.1| glycyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] gi|242348424|gb|EES40026.1| glycyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] Length = 463 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + LK L+++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNFWKTFASQWLKDLNINEENMRLRDHDEDELSHYSNATTDIEYRFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 289 GELWGIASRTDF 300 >gi|149748805|ref|XP_001490094.1| PREDICTED: CDC42 binding protein kinase alpha (DMPK-like) isoform 1 [Equus caballus] Length = 1719 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 44/116 (37%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L ++ +R L+ I + +++ + L ++ ED Sbjct: 487 LEIKNLKEEIEKLRKQVRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIKALQQERED 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHAQKQKLARHVRD 602 >gi|149053243|gb|EDM05060.1| rabaptin, RAB GTPase binding effector protein 1, isoform CRA_d [Rattus norvegicus] Length = 819 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ + L++R E Q E +L+ + + + E +R+ +I + Sbjct: 104 RESADREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 161 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 162 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 221 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 222 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 261 >gi|89889588|ref|ZP_01201099.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] gi|89517861|gb|EAS20517.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] Length = 690 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 9/115 (7%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA-QIGQAIAEG----- 65 +++ L KR E + I D + R I +++ A + +I + Sbjct: 212 QNIKANLIKRDEE---KVIRKQDVEAREAILELDKQLAEKEEQQKREISNIKSREEAETL 268 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++ + LK+ET+ + + + EE+ + + +E + Sbjct: 269 KVAEEERLKSETARIATEEKVKVAEENMQRQIIVAEKNKQRTNAVETERVEKDRM 323 >gi|15606343|ref|NP_213722.1| hypothetical protein aq_1060 [Aquifex aeolicus VF5] gi|2983555|gb|AAC07129.1| putative protein [Aquifex aeolicus VF5] Length = 374 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 46/108 (42%), Gaps = 7/108 (6%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ ++ + E +L ++ L P+ +D ++L+ + E + + +I +A Sbjct: 144 IKLVKLDWERYK-SLFQKGLIPRR-KFEEVDTNLKVLLHEREYLEKSIQEINTEIKRAKK 201 Query: 64 -----EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 ++ LK E S+L+E++ L++ +K + P Sbjct: 202 GIENARNEFKTIEELKKELSSLEEEIKSLKERIKTAEQKIKDTVLIAP 249 >gi|333029809|ref|ZP_08457870.1| DNA polymerase III, alpha subunit [Bacteroides coprosuis DSM 18011] gi|332740406|gb|EGJ70888.1| DNA polymerase III, alpha subunit [Bacteroides coprosuis DSM 18011] Length = 1261 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 32/128 (25%), Gaps = 2/128 (1%) Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 I +IG A EG D + + L+E+ L K + + I Sbjct: 62 INGEIKQLKKKIGAAKKEGKSE--DEISQLSEELREKQKSLFKPIIGCEMYVARRGLHIK 119 Query: 107 NVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ E F + + ++ + + Sbjct: 120 ETKFDQSGYHLVVLAKNEKGYHNLIKLVSTAWTEGFYMRPRTDRTELEKYHEGLIVSTAC 179 Query: 167 LTGHLAHL 174 L G + Sbjct: 180 LGGEVPKK 187 >gi|332027052|gb|EGI67148.1| Cytochrome P450 6B3 [Acromyrmex echinatior] Length = 2102 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 31/105 (29%), Gaps = 14/105 (13%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI- 62 I + L L + I L+ + L + ++ N+ +I + Sbjct: 692 INLLTDEVNKLREQL-----DNAENRIKFLEAQLVSLQTDKDKMQNEINALQNEISKLKL 746 Query: 63 --------AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + ALKNE L ++ + + H + Sbjct: 747 DLSAESTAKRDIQEELVALKNEMKNLILKIDEMRVQNHALKEERD 791 >gi|290969263|ref|ZP_06560788.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] gi|290780769|gb|EFD93372.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] Length = 462 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 32/78 (41%), Gaps = 5/78 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + I +++ + L +K++ + + +++ + L+ + +LKE+ Sbjct: 101 ELSKDDISKMEKDAKELQEKLDKLNSEMKDKDK-----LSDKQKEKIKELEAQIESLKEK 155 Query: 84 LPILEKEEHEVCSSLKKL 101 ++ + K++ Sbjct: 156 TKKDKENKGLSEEMKKEM 173 Score = 36.7 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 7/107 (6%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 DI + ++ + L L K + E + + L +K + IK++E + Sbjct: 106 DISKMEKDAKELQEKLDKLNSEMKDKD--KLSDKQKEKIKELEAQIESLKEKTK-----K 158 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + N L + +K E L +++ LE++ +E + PN P Sbjct: 159 DKENKGLSEEMKKEMDKLNKKIKELEEKANEANKAHVISNPPAPNSP 205 >gi|166032677|ref|ZP_02235506.1| hypothetical protein DORFOR_02392 [Dorea formicigenerans ATCC 27755] gi|166027034|gb|EDR45791.1| hypothetical protein DORFOR_02392 [Dorea formicigenerans ATCC 27755] Length = 487 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 69/262 (26%), Gaps = 16/262 (6%) Query: 104 CIPNVPLEEVP-IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGA 162 E +G + ++ S + E D+ + Sbjct: 71 WWQKFIQESPYNVGVDCAILMNPQTWIASGHLGGFSDPLMDCKECHERFRADKIIEDYAH 130 Query: 163 RFSVLTGHLA--HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 + G + F+ + + + + M+ T Q +D Sbjct: 131 EHGIEIGDSIDGWSHEQMENFIKENNVPCPTCGKHDFTEIREFNLMFKTFQ--GVTEDAK 188 Query: 221 CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQ 280 T T++ N + + K +P + SFR+E R + Sbjct: 189 NT--VYLRPETAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI----TPGNFTFRTRE 242 Query: 281 FWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDL 337 F + EL + + L L L V D L F + T D+ Sbjct: 243 FEQMELEFFCEPDTDLEWFAYWKKFCLDWLHTLGLKDEEVRYRDHDKEELSFYSKATTDI 302 Query: 338 EVWLAGQNLYREISSCSTCGNF 359 E + E+ + ++ Sbjct: 303 EFLFPF--GWGELWGIADRTDY 322 >gi|56421965|ref|YP_149283.1| glycyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|81675673|sp|Q5KUC1|SYG_GEOKA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|56381807|dbj|BAD77715.1| glycyl-tRNA synthetase [Geobacillus kaustophilus HTA426] Length = 460 Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 173 TAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + + ++ L L + + R+ +L + T D+E + Sbjct: 229 KPGEELQWFDYWKQFCKDWLLSLGMKEDNIRLRDHAKEELSHYSNATTDIEYHFPF--GW 286 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ ++ +R Sbjct: 287 GELWGIASRTDYDLKR 302 >gi|293556646|ref|ZP_06675211.1| prolyl-tRNA synthetase [Enterococcus faecium E1039] gi|291601181|gb|EFF31468.1| prolyl-tRNA synthetase [Enterococcus faecium E1039] Length = 569 Score = 40.1 bits (92), Expect = 0.74, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 9/147 (6%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFC----TTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ P ++ E +G+ + +++ L PT E + T+L +EI K Sbjct: 68 EMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRNEINSYKK 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S E+S ++ E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKAYTE 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY 335 + KR L +R + G +G K + Sbjct: 184 VFKRCGLEFRSIIGDGGAMGGKDSKEF 210 >gi|332665930|ref|YP_004448718.1| hypothetical protein Halhy_3997 [Haliscomenobacter hydrossis DSM 1100] gi|332334744|gb|AEE51845.1| hypothetical protein Halhy_3997 [Haliscomenobacter hydrossis DSM 1100] Length = 1111 Score = 40.1 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 51/171 (29%), Gaps = 21/171 (12%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILI--------------KKIEDIRARRNSN 54 QN + + LK L E+ R L K++E + R+ Sbjct: 508 QNDDKIKDNLKD-----ALAEAKKLQEEIRRLQEKLLQEKDINWQTRKQLEKLLERQKEL 562 Query: 55 SAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 QI +A E N + L L+E+ +LE+ + K + ++E Sbjct: 563 EKQIKEAQKAFEENKKNQEQLGETPEELQEKQEMLEELMESLEDPEMKELMEKIEKLMQE 622 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 + + ++ +K E L A KL Sbjct: 623 MEKDQALEMMEQMKDQNEKRENELERMEELFKQLELEQEINKAADKLDEMA 673 >gi|326426858|gb|EGD72428.1| prolyl-tRNA synthetase [Salpingoeca sp. ATCC 50818] Length = 447 Score = 40.1 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 9/141 (6%) Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG----RWLIPTSEVSLTNLYSHEIIESK 248 E P + +G+ + D++F D L T E ++T L S + + Sbjct: 73 QECVLPAITDKHLWQQSGRWQEAGDELFRLEDRKGAAYCLAATHEETVTALVSSLVSSHR 132 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED-SFTEHERMLSCAE 307 SLPL + P +R E R G+LR +F ++ + E + + +++ C + Sbjct: 133 SLPLYLYQMQPKYRDE----MRPRYGLLRCREFMMKDMYTFDSSEQDARATYAKVVECYQ 188 Query: 308 EILKRLDLHYRVVSLCTGDLG 328 IL+RL + + V TG +G Sbjct: 189 RILQRLGVPFAKVQADTGLIG 209 >gi|257878529|ref|ZP_05658182.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257882947|ref|ZP_05662600.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257894712|ref|ZP_05674365.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|293567720|ref|ZP_06679062.1| prolyl-tRNA synthetase [Enterococcus faecium E1071] gi|294618726|ref|ZP_06698258.1| prolyl-tRNA synthetase [Enterococcus faecium E1679] gi|294620760|ref|ZP_06699967.1| prolyl-tRNA synthetase [Enterococcus faecium U0317] gi|257812757|gb|EEV41515.1| prolyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257818605|gb|EEV45933.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257831091|gb|EEV57698.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|291589563|gb|EFF21369.1| prolyl-tRNA synthetase [Enterococcus faecium E1071] gi|291595039|gb|EFF26384.1| prolyl-tRNA synthetase [Enterococcus faecium E1679] gi|291599740|gb|EFF30750.1| prolyl-tRNA synthetase [Enterococcus faecium U0317] Length = 569 Score = 40.1 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 9/147 (6%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFC----TTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ P ++ E +G+ + +++ L PT E + T+L +EI K Sbjct: 68 EMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRNEINSYKK 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S E+S ++ E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKAYTE 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY 335 + KR L +R + G +G K + Sbjct: 184 VFKRCGLEFRSIIGDGGAMGGKDSKEF 210 >gi|116619644|ref|YP_821800.1| ATPase [Candidatus Solibacter usitatus Ellin6076] gi|116222806|gb|ABJ81515.1| ATPase AAA-2 domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 869 Score = 40.1 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 8/73 (10%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIK---KIEDIRARRNSNSAQIGQAIAEGNL 67 + +D + + E S + LDE R +++ + E +R ++ S + + Sbjct: 386 IDLVDESAARLRTEIDSMPV-ELDETRRRIMQLEIEREALRKEKDKASKE--RLTKLEK- 441 Query: 68 SLVDALKNETSTL 80 + LK E+ L Sbjct: 442 -ELADLKAESDEL 453 >gi|294155542|ref|YP_003559926.1| glycine--tRNA ligase [Mycoplasma crocodyli MP145] gi|291600446|gb|ADE19942.1| glycine--tRNA ligase [Mycoplasma crocodyli MP145] Length = 468 Score = 40.1 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 69/197 (35%), Gaps = 22/197 (11%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + LPL + SFR+E + R +F + EL Sbjct: 186 TAQGIFINFKNVLRTTRSKLPLGIGQIGKSFRNEV----TPGNFIFRTREFEQMELEVFC 241 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 E + +E + + + L + +++ D L + T D+E + Sbjct: 242 YPELASNTYEYYIQKCYDFVINLGVSPKLIRKRVHDKEELSHYSAGTTDIEFEFPF--GW 299 Query: 348 REISSCSTCGNF------QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL---- 397 E+ + +F + + Y DP + + S V + R ++AIL Sbjct: 300 GELLGIANRTDFDLKAHMSATNESLEYLDPETNKKIIPFIIEPS-VGLDRLMLAILCAAY 358 Query: 398 ENYLNADGSVTIPTVLR 414 E DG I VLR Sbjct: 359 EEEKLEDGDTRI--VLR 373 >gi|256810817|ref|YP_003128186.1| chromosome segregation protein SMC [Methanocaldococcus fervens AG86] gi|256794017|gb|ACV24686.1| chromosome segregation protein SMC [Methanocaldococcus fervens AG86] Length = 1169 Score = 40.1 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 53/129 (41%), Gaps = 16/129 (12%) Query: 7 IRQNPEHLDIALKKRHLEPQSE--YILSLDEKNRILIKKIEDIRA-------RRNSNSAQ 57 I E + +R + I L+ KN+ ++ ++E+++ + N ++ Sbjct: 716 IENTLEIIKKNEMRRREIVEKNNIKIKELELKNKEILDELEELKINKEEILDKINEIESK 775 Query: 58 IGQA-------IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 I + + E D + ++++L ILEKE+ ++ + + K ++ + + + Sbjct: 776 INELIEKRERIMKELKEYESDENLKRMNEIEDELKILEKEKAKLKNEIDKGLTLVKEILI 835 Query: 111 EEVPIGTSA 119 ++ Sbjct: 836 PKIEELNKK 844 >gi|21429104|gb|AAM50271.1| LD44530p [Drosophila melanogaster] Length = 462 Score = 40.1 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 13/109 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 364 LDPEIERDRLKKFQEQEKKRYMQ----------EERRFEVKHQKQLEELRATRESAIKEL 413 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 Q E +LV+ ++ S + E+L +E E K++ IP Sbjct: 414 EQLQNEKRRALVEHEHSKLSEIDERLKGELREWREQLVPRKQVCMQIPV 462 >gi|329663600|ref|NP_001193052.1| kinesin-like protein KIF27 [Bos taurus] gi|297478116|ref|XP_002689853.1| PREDICTED: kinesin family member 3B-like [Bos taurus] gi|296484547|gb|DAA26662.1| kinesin family member 3B-like [Bos taurus] Length = 1395 Score = 40.1 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIED-IRARRNSNSAQIGQ 60 D++ ++ + +K+R + + LD++ + L +++E + R+ + Sbjct: 886 DLKLKAEDLDAFK--MKRRKGSFGSIDQLQKLDKQKKWLDEEVEKVLNQRQELEELEEDL 943 Query: 61 AIAEGNLSLVDALKNETSTLKEQ 83 E +S +AL E S L+ + Sbjct: 944 KKREAIVSKKEALLQEKSHLESK 966 >gi|312383164|gb|EFR28354.1| hypothetical protein AND_03873 [Anopheles darlingi] Length = 714 Score = 40.1 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 10/82 (12%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE----------GNLSLVDALKNETS 78 I +L++ R L ++ +IR +R+ S +IG E V+ L++E Sbjct: 23 NITTLEKDKRQLEAELNEIRQQRDKLSTEIGVLKKETLEQHNAKLNEAQRTVEKLEDENK 82 Query: 79 TLKEQLPILEKEEHEVCSSLKK 100 +++ LE + + + S++K Sbjct: 83 KQNDKIKTLEDKINRINSNMKA 104 >gi|119195685|ref|XP_001248446.1| hypothetical protein CIMG_02217 [Coccidioides immitis RS] Length = 1260 Score = 40.1 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 72/238 (30%), Gaps = 16/238 (6%) Query: 5 QWIRQNPEHLDIALK--KRHLEPQSEYILSLDEKNRIL---IKKIEDIRARRNSNSAQIG 59 + + + ++ + R I L++K R L ++E + + ++ Sbjct: 742 KELEEKQSEVEAKQEEINRLKSELESKIAELEDKRRELEQKQGELESKQTELQAIQDELR 801 Query: 60 QAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + A E S +++ + + +E+L + E +V ++ + E+ Sbjct: 802 EVKAELEEKKSQLESKQADLDKKQEELTAKQAELDDVKEKHAAELAALRAQLEEQTNATK 861 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +E I + + ++ DF+ + V L Sbjct: 862 ERDEKIEAMTTEHQQKEEQWQKDR---------GDFEAQLQEKTEELKVALEEKEALAVD 912 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVS 235 L + + L E + T A DM D ++ E+S Sbjct: 913 GKNREERLQSIVEEMRQTHDNLNKDRERLKKTLHSLGEATDMKIKGDAFFVDCFGELS 970 >gi|289550664|ref|YP_003471568.1| Glycyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|289180196|gb|ADC87441.1| Glycyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] Length = 463 Score = 40.1 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + LK L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASQWLKDLNISEENMRLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 289 GELWGIASRTDF 300 >gi|148680674|gb|EDL12621.1| rabaptin, RAB GTPase binding effector protein 1, isoform CRA_b [Mus musculus] Length = 819 Score = 40.1 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 104 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 161 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 162 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 221 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 222 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 261 >gi|12005629|gb|AAG44544.1|AF248490_1 rabaptin-5gamma [Mus musculus] Length = 819 Score = 40.1 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 104 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 161 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 162 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 221 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 222 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 261 >gi|257884339|ref|ZP_05663992.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|261207398|ref|ZP_05922084.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289566680|ref|ZP_06447097.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|294613940|ref|ZP_06693875.1| prolyl-tRNA synthetase [Enterococcus faecium E1636] gi|257820177|gb|EEV47325.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|260078289|gb|EEW65994.1| prolyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289161539|gb|EFD09422.1| prolyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|291593215|gb|EFF24789.1| prolyl-tRNA synthetase [Enterococcus faecium E1636] Length = 569 Score = 40.1 bits (92), Expect = 0.77, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 9/147 (6%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFC----TTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ P ++ E +G+ + +++ L PT E + T+L +EI K Sbjct: 68 EMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRNEINSYKK 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S E+S ++ E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKAYTE 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY 335 + KR L +R + G +G K + Sbjct: 184 VFKRCGLEFRSIIGDGGAMGGKDSKEF 210 >gi|149053240|gb|EDM05057.1| rabaptin, RAB GTPase binding effector protein 1, isoform CRA_a [Rattus norvegicus] Length = 862 Score = 40.1 bits (92), Expect = 0.77, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ + L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESADREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|69246859|ref|ZP_00604151.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO] gi|257889274|ref|ZP_05668927.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|258615945|ref|ZP_05713715.1| prolyl-tRNA synthetase [Enterococcus faecium DO] gi|260560114|ref|ZP_05832292.1| prolyl-tRNA synthetase [Enterococcus faecium C68] gi|293560203|ref|ZP_06676705.1| prolyl-tRNA synthetase [Enterococcus faecium E1162] gi|314937502|ref|ZP_07844835.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314942161|ref|ZP_07849015.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314947499|ref|ZP_07850914.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082] gi|314951486|ref|ZP_07854535.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314992576|ref|ZP_07857994.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314995489|ref|ZP_07860589.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|68195040|gb|EAN09503.1| Prolyl-tRNA synthetase, bacterial [Enterococcus faecium DO] gi|257825634|gb|EEV52260.1| prolyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|260073949|gb|EEW62273.1| prolyl-tRNA synthetase [Enterococcus faecium C68] gi|291605875|gb|EFF35307.1| prolyl-tRNA synthetase [Enterococcus faecium E1162] gi|313590323|gb|EFR69168.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313592868|gb|EFR71713.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313596326|gb|EFR75171.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313599084|gb|EFR77929.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313643143|gb|EFS07723.1| prolyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|313646049|gb|EFS10629.1| prolyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 569 Score = 40.1 bits (92), Expect = 0.77, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 9/147 (6%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFC----TTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ P ++ E +G+ + +++ L PT E + T+L +EI K Sbjct: 68 EMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRNEINSYKK 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S E+S ++ E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKAYTE 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY 335 + KR L +R + G +G K + Sbjct: 184 VFKRCGLEFRSIIGDGGAMGGKDSKEF 210 >gi|297584648|ref|YP_003700428.1| putative seryl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297143105|gb|ADH99862.1| putative seryl-tRNA synthetase (serine--tRNA ligase) (SerRS) [Bacillus selenitireducens MLS10] Length = 336 Score = 40.1 bits (92), Expect = 0.78, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 6/95 (6%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIED-IRARRNSNSAQIGQAI 62 + + +NP+ + + K+ L+ + ILS+D + + K I ++ + +I QA Sbjct: 191 KEVLENPDMISQTVLKKGLDAGTAFEILSIDIADIDIGKNIGAGLQTDQAEADKKIAQAK 250 Query: 63 AEGNLSLV----DALKNETSTLKEQLPILEKEEHE 93 AE ++ +K ++ ++ E E Sbjct: 251 AEERRAMAVAQEQEMKARVEEMRAKVVEAEAEVPM 285 >gi|340217|gb|AAA61278.1| cytovillin 2 [Homo sapiens] Length = 575 Score = 40.1 bits (92), Expect = 0.78, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 340 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 399 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 400 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 444 >gi|84489383|ref|YP_447615.1| excinuclease ABC subunit B [Methanosphaera stadtmanae DSM 3091] gi|121717291|sp|Q2NGT1|UVRB_METST RecName: Full=UvrABC system protein B; Short=Protein uvrB; AltName: Full=Excinuclease ABC subunit B gi|84372702|gb|ABC56972.1| UvrB [Methanosphaera stadtmanae DSM 3091] Length = 649 Score = 40.1 bits (92), Expect = 0.78, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 6/73 (8%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV 70 P + LK + +E + + I +D ++I ++ QA + N Sbjct: 583 PRSVVRKLKDKKIEEKVDDIQEIDN------ITTDEIDEIIKELEKEMKQAAKDLNFEKA 636 Query: 71 DALKNETSTLKEQ 83 L++ LKE+ Sbjct: 637 AKLRDRIMELKEE 649 >gi|301311533|ref|ZP_07217460.1| putative SPFH domain / Band 7 family protein [Bacteroides sp. 20_3] gi|300830619|gb|EFK61262.1| putative SPFH domain / Band 7 family protein [Bacteroides sp. 20_3] Length = 330 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 12/86 (13%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + ++ L+ + ILS+D KN +++ +A +N Sbjct: 191 KTVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAFLQMDQAQADKN----- 245 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQ 83 I QA AE ++ AL+ E ++ Sbjct: 246 IAQAKAEERRAMAVALEQEMKAKAQE 271 >gi|296199539|ref|XP_002747198.1| PREDICTED: ezrin [Callithrix jacchus] Length = 575 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 340 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 399 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 400 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 444 >gi|282899659|ref|ZP_06307623.1| ABC-transporter DevB family protein [Cylindrospermopsis raciborskii CS-505] gi|281195538|gb|EFA70471.1| ABC-transporter DevB family protein [Cylindrospermopsis raciborskii CS-505] Length = 419 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 10/92 (10%), Positives = 34/92 (36%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 + ++ L + ++ I+++ + L +E + + N A++ Q + + Sbjct: 71 DRVEKILLQEGDAVKAGQIIAILDSRDKLQSAVERAQKQVNVTQAKLKQIKSGAKPGEIQ 130 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + K LK + + + + ++ Sbjct: 131 SQKANVEKLKAEYEGNKNAYIQTIARIEAQWQ 162 >gi|257898235|ref|ZP_05677888.1| prolyl-tRNA synthetase [Enterococcus faecium Com15] gi|293570616|ref|ZP_06681667.1| prolyl-tRNA synthetase [Enterococcus faecium E980] gi|257836147|gb|EEV61221.1| prolyl-tRNA synthetase [Enterococcus faecium Com15] gi|291609287|gb|EFF38558.1| prolyl-tRNA synthetase [Enterococcus faecium E980] Length = 569 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 9/147 (6%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFC----TTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ P ++ E +G+ + +++ L PT E + T+L +EI K Sbjct: 68 EMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRNEINSYKK 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S E+S ++ E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKAYTE 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY 335 + KR L +R + G +G K + Sbjct: 184 VFKRCGLEFRSIIGDGGAMGGKDSKEF 210 >gi|256841239|ref|ZP_05546746.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262383608|ref|ZP_06076744.1| UPF0365 protein [Bacteroides sp. 2_1_33B] gi|256737082|gb|EEU50409.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262294506|gb|EEY82438.1| UPF0365 protein [Bacteroides sp. 2_1_33B] Length = 330 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 12/86 (13%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + ++ L+ + ILS+D KN +++ +A +N Sbjct: 191 KTVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAFLQMDQAQADKN----- 245 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQ 83 I QA AE ++ AL+ E ++ Sbjct: 246 IAQAKAEERRAMAVALEQEMKAKAQE 271 >gi|254413963|ref|ZP_05027731.1| ABC exporter membrane fusion protein, DevB family [Microcoleus chthonoplastes PCC 7420] gi|196179099|gb|EDX74095.1| ABC exporter membrane fusion protein, DevB family [Microcoleus chthonoplastes PCC 7420] Length = 399 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 36/99 (36%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 + + L +R +++ ++++ L + + +A+ A++ Q A + Sbjct: 79 DRVGQLLVQRGDSVEADQVIAIMNSQNRLQTALLEAQAQVKVAQAELAQVKAGAKSGEIA 138 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 A K+E L++ L + + + + Sbjct: 139 AQKSEIVRLQKNLEGELATQQAAIARWQAEVKTAQAEYD 177 >gi|150008726|ref|YP_001303469.1| hypothetical protein BDI_2116 [Parabacteroides distasonis ATCC 8503] gi|255014524|ref|ZP_05286650.1| hypothetical protein B2_11489 [Bacteroides sp. 2_1_7] gi|298375979|ref|ZP_06985935.1| SPFH domain/Band 7 family protein [Bacteroides sp. 3_1_19] gi|172048836|sp|A6LDT3|Y2116_PARD8 RecName: Full=UPF0365 protein BDI_2116 gi|149937150|gb|ABR43847.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|298267016|gb|EFI08673.1| SPFH domain/Band 7 family protein [Bacteroides sp. 3_1_19] Length = 330 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 12/86 (13%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + ++ L+ + ILS+D KN +++ +A +N Sbjct: 191 KTVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGKNIGAFLQMDQAQADKN----- 245 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQ 83 I QA AE ++ AL+ E ++ Sbjct: 246 IAQAKAEERRAMAVALEQEMKAKAQE 271 >gi|148989269|ref|ZP_01820649.1| hypothetical protein CGSSp6BS73_03122 [Streptococcus pneumoniae SP6-BS73] gi|147925247|gb|EDK76326.1| hypothetical protein CGSSp6BS73_03122 [Streptococcus pneumoniae SP6-BS73] Length = 1080 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + + + + I Sbjct: 273 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLA--I 330 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 331 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRLD 382 >gi|114665924|ref|XP_001165310.1| PREDICTED: rab GTPase-binding effector protein 1 isoform 6 [Pan troglodytes] Length = 862 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|9506845|ref|NP_061997.1| rab GTPase-binding effector protein 1 [Rattus norvegicus] gi|47605933|sp|O35550|RABE1_RAT RecName: Full=Rab GTPase-binding effector protein 1; AltName: Full=Rabaptin-5; AltName: Full=Rabaptin-5alpha gi|2329847|dbj|BAA21782.1| rabaptin-5 [Rattus norvegicus] Length = 862 Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ + L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESADREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|312082087|ref|XP_003143299.1| hypothetical protein LOAG_07718 [Loa loa] gi|307761539|gb|EFO20773.1| hypothetical protein LOAG_07718 [Loa loa] Length = 205 Score = 39.7 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 41/107 (38%), Gaps = 11/107 (10%) Query: 11 PEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 E + + K+ E + + L +I++++ + + + ++ + EG Sbjct: 100 LEEVKADIVEAKKGKEATV--------ERKKLKLEIDELQTKHEALTKKLEKLNEEG-PE 150 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 V L++ET+ ++++ + K+ + V + I Sbjct: 151 AVARLESETAKIRDEANRWTENIFAAKRWCKRNFNVEEKVLNAQFEI 197 >gi|149183480|ref|ZP_01861910.1| YqfA [Bacillus sp. SG-1] gi|148848816|gb|EDL63036.1| YqfA [Bacillus sp. SG-1] Length = 333 Score = 39.7 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 18/98 (18%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + + L+ + ILS+D I ++ +++ + Sbjct: 193 KKVLENPDMISQTVLTKGLDAGTAFEILSID------IADVDIGKNIGAELQTEQAEADK 246 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 I QA AE ++ + + ++ ++ E E Sbjct: 247 NIAQAKAEERRAMAVANEQEMLAKVQEMRAKVVEAEAE 284 >gi|123509862|ref|XP_001329960.1| viral A-type inclusion protein [Trichomonas vaginalis G3] gi|121913011|gb|EAY17825.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3] Length = 2923 Score = 39.7 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 9/100 (9%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNS-------NSAQIGQAIAEGNLSLVDA 72 KR + S I L ++N+ L+ +IE++++ +N +I + E + + Sbjct: 2192 KRKISELSNQINQLSQENKDLVSQIEELKSSKNKSKDINKNLEKEIDRLRIENSQNEKLR 2251 Query: 73 LKNE--TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + E ++ L+ +L +E + + Sbjct: 2252 ISAEKYSAELETKLESIENKHETEKKDIIDRHFAAEQELD 2291 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD------ALKN 75 + E I +L E N+ L +KI+++ N QI + +E + K Sbjct: 2134 NDEISKREIRNLKENNKNLQEKIDNLIKNENELKRQISKEKSEKDQQKSQYENEDHENKR 2193 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKK 100 + S L Q+ L +E ++ S +++ Sbjct: 2194 KISELSNQINQLSQENKDLVSQIEE 2218 >gi|116182036|ref|XP_001220867.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88185943|gb|EAQ93411.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 796 Score = 39.7 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 10/83 (12%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQI-----GQAIAEGNLSLV-----DALKNET 77 E ILSLD+K + ++E +R ++ S + + K E Sbjct: 329 EDILSLDQKIMTIQIELESLRKEKDIASKERREKLEADLKKCQEEEQALTDKWEREKAEI 388 Query: 78 STLKEQLPILEKEEHEVCSSLKK 100 +K+ L++ E+ + + Sbjct: 389 DAIKQTQAELDRARVELEMAQRD 411 >gi|315658159|ref|ZP_07911031.1| glycyl-tRNA synthetase beta subunit [Staphylococcus lugdunensis M23590] gi|315496488|gb|EFU84811.1| glycyl-tRNA synthetase beta subunit [Staphylococcus lugdunensis M23590] Length = 475 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 187 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 242 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + LK L++ + L D L + T D+E + Sbjct: 243 KPGEEIEWQNYWKTFASQWLKDLNISEENMRLRDHDEDELSHYSNATTDIEYKFPF--GW 300 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 301 GELWGIASRTDF 312 >gi|313225784|emb|CBY07258.1| unnamed protein product [Oikopleura dioica] Length = 187 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 5/72 (6%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 KR E E + L+ + R +KI ++RA + S + A + +K Sbjct: 91 KEKEYKRTFEVHKENVAELEAEKRQANQKISNLRAEKKSL-----EEYAALQQKETEQMK 145 Query: 75 NETSTLKEQLPI 86 NE + K+Q + Sbjct: 146 NEMAPYKKQNAM 157 >gi|297691911|ref|XP_002823306.1| PREDICTED: keratin, type II cuticular Hb2-like [Pongo abelii] Length = 513 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 44/87 (50%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L ++IE+++A+R I +A +G +L DA K Sbjct: 327 DNLRNRK-----NEILEMNKLIQRLQQEIENVKAQRCKLEGAIAEAEQQGEAALNDA-KC 380 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 381 KLAGLEEALQKAKQDMACLLKEYQEVM 407 >gi|1575770|gb|AAB47746.1| rabaptin [Rattus norvegicus] Length = 862 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ + L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESADREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|134300327|ref|YP_001113823.1| hypothetical protein Dred_2488 [Desulfotomaculum reducens MI-1] gi|134053027|gb|ABO50998.1| protein of unknown function DUF1432 [Desulfotomaculum reducens MI-1] Length = 331 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 16/100 (16%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + + L+ + ILS+D +N + + A +N Sbjct: 191 KTVLENPDSISKTVLSKGLDAGTAFEILSIDIADVDIGRNIGAQLQTDQAEADKN----- 245 Query: 58 IGQAIAEGNLSLV----DALKNETSTLKEQLPILEKEEHE 93 I QA AE ++ +K ++ ++ E E Sbjct: 246 IAQAKAEERRAMAVAQEQEMKARVQEMRAKVVEAEAEVPR 285 >gi|332206139|ref|XP_003252149.1| PREDICTED: keratin, type II cuticular Hb2 [Nomascus leucogenys] Length = 513 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 44/87 (50%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L ++IE+++A+R I +A +G +L DA K Sbjct: 327 DNLRNRK-----NEILEMNKLIQRLQQEIENVKAQRCKLEGAIAEAEQQGEAALNDA-KC 380 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 381 KLAGLEEALQKAKQDMACLLKEYQEVM 407 >gi|322693502|gb|EFY85360.1| GDP/GTP exchange factor Sec2p, putative [Metarhizium acridum CQMa 102] Length = 685 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 23/141 (16%) Query: 1 MLDIQWIRQN---------PEHLDIALKKRHLEPQSEY--ILSLD--EKNRILIKKIEDI 47 MLD IR + E +AL+K+ ++ + LD ++ R + +++E++ Sbjct: 165 MLD--TIRGDVWVRRSTLEAEKKALALEKKGMQAKLAEETARRLDTEKEKRKIEQELENL 222 Query: 48 R----ARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 N IG E + DAL+ + LK QL E L +L S Sbjct: 223 TTALFEEANKM--VIGA--KEEAQAQHDALRRKIDQLKAQLADSEGLLKSQQEQLSELKS 278 Query: 104 CIPNVPLEEVPIGTSANENIL 124 + + E Sbjct: 279 VMETMASEHDEQTNGTAPPSP 299 >gi|298251346|ref|ZP_06975149.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963] gi|297545938|gb|EFH79806.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963] Length = 872 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 52/178 (29%), Gaps = 4/178 (2%) Query: 11 PEHLDIALKKRHLEPQSE--YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A ++ +E S I +LD + R L + E ++ + S + +A E ++ Sbjct: 391 IDLVDEAASRKRVELDSTPTEIDALDRRIRQLQIEHEALKKESDPGSQE-RRAKVEQEIA 449 Query: 69 LVDALKNETS-TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 + N L+ + +E + + I ++ R Sbjct: 450 NLQEQLNAMKLALERERGPVETMRNIQQELEQAQIELEKAELEYNFARAAELRHGVIPRL 509 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDL 185 + +D + ++ + L E M D Sbjct: 510 EQQLHEMEERLANIKGARMLKEEVDAEDIAEVISQWTHIPATRLMEGEIEKLVHMEDN 567 >gi|213390626|gb|ACJ45837.1| septin/tuftelin interacting protein [Paltostoma diriageni] Length = 743 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 26/202 (12%), Positives = 59/202 (29%), Gaps = 18/202 (8%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M ++ I ++ + I+ +D+ R + +R+ + + I + Sbjct: 307 MHNLNLI---------------VDVCEQDIIRIDKNRRSCSDRQAQLRSEKENLVK-IVE 350 Query: 61 AIAEGNLSLVDALKNETSTL--KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 +L +AL+ T+ + KE L + E E + + + Sbjct: 351 LEKNHTNTLENALELVTALISPKEALSLEEAERIFIQLQTNYPTEYKEFCLGDLAAGVIA 410 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + +++ S L + V +G + A Sbjct: 411 PLFSQRLKNWDPLQSPNKYVDLLKRWKSTLDVQPTQTTNVFEPYSALVWSGMMPVFRLAA 470 Query: 179 GQFMIDLHTSEHGYTEVSAPLL 200 + H + + APLL Sbjct: 471 SSWNPRQHQPMATFLDSYAPLL 492 >gi|242021327|ref|XP_002431096.1| Phosphatidylinositol 3-kinase regulatory subunit alpha, putative [Pediculus humanus corporis] gi|212516345|gb|EEB18358.1| Phosphatidylinositol 3-kinase regulatory subunit alpha, putative [Pediculus humanus corporis] Length = 726 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 25/200 (12%), Positives = 65/200 (32%), Gaps = 40/200 (20%) Query: 2 LDIQWI----R-QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 LDI+ + R Q + + +L ++E ++ + ++ + + + + ++ N S Sbjct: 409 LDIKLLYPVSRFQQEDEIASSL---NIEKVAKKLAEIEAQLQDKSRTFQKLKEDFNKISK 465 Query: 57 QIGQA-------------------------IAEGNLSLVDALKNETSTLKEQLPILEKEE 91 +I E + +L + LK+++ LE+ Sbjct: 466 EIEVKRGPTMDAFIELTNMFKEQQELQERFKKEAQPHEIKSLMVNSELLKQRIKSLEESR 525 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTS----ANENILIRSVGKKPSAIHLSREHFEIGEA 147 + +LK+ ++ + E + + + + +HF E+ Sbjct: 526 ELLKENLKQQVAYYKTLEREMLTVKREMLGLSKQKEQHMKWLLCKGVKQSQIDHFLAPES 585 Query: 148 ---LGLMDFDRATKLSGARF 164 GL + + L Sbjct: 586 LTPWGLRELETDENLKSMPH 605 >gi|149053242|gb|EDM05059.1| rabaptin, RAB GTPase binding effector protein 1, isoform CRA_c [Rattus norvegicus] Length = 778 Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ + L++R E Q E +L+ + + + E +R+ +I + Sbjct: 63 RESADREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 120 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 121 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 180 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 181 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 220 >gi|120436975|ref|YP_862661.1| hypothetical protein GFO_2638 [Gramella forsetii KT0803] gi|117579125|emb|CAL67594.1| conserved hypothetical protein [Gramella forsetii KT0803] Length = 691 Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 9/111 (8%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA-QIGQAIAEGNLS----- 68 L KR E + I D + R I +++ A + +I A + Sbjct: 215 KANLIKRDEE---KTIRKQDVEAREAILELDKQLAEKEEQQKREIANIKAREDAETLKVN 271 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + LK+ET+ + + + EE+ + L + +E + Sbjct: 272 EEERLKSETARIATEEKVKVAEENMQRQIIVALKNKERTDAVESERVEKDR 322 >gi|104783947|ref|YP_610445.1| hypothetical protein PSEEN5028 [Pseudomonas entomophila L48] gi|95112934|emb|CAK17662.1| conserved hypothetical protein; putative signal peptide [Pseudomonas entomophila L48] Length = 131 Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 25/49 (51%) Query: 37 NRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLP 85 + +K+ D R N + + +A+ +G+ ++ K++ + K++L Sbjct: 75 RKEREQKVLDARHEVNQRTKDLDKAMKKGDAEKINKRKDKLAEAKKELQ 123 >gi|57642092|ref|YP_184570.1| hypothetical protein TK2157 [Thermococcus kodakarensis KOD1] gi|57160416|dbj|BAD86346.1| hypothetical protein, conserved [Thermococcus kodakarensis KOD1] Length = 301 Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 72/216 (33%), Gaps = 14/216 (6%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 +PE + KR I +L+++ + K++++ Q+ + Sbjct: 7 DPEEIKR--IKR-------EIEALEKERNEIRAKLDELEKEL-----QVWIQKRDEKNKE 52 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 V L+ + K + + ++ E+ + +++ + + + E + T NE +R + Sbjct: 53 VQQLRQKGREYKAKRDEINQKIQELKKNREEINAKLDLLYQEILEYKTKRNEYNQLRRLK 112 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE 189 P I E E K + VL L +++A + T + Sbjct: 113 MSPERIQERIEKLEWELQTNPNITPEREKQIVDQIQVLATELEIIQQAERFHKKLVETRK 172 Query: 190 HGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG 225 A + E Q +F + M + Sbjct: 173 KVDQLKKARKAISLEIQKLANQSQQFHEQMIQAFNK 208 >gi|154757646|gb|AAI51784.1| RABEP1 protein [Bos taurus] Length = 753 Score = 39.7 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|126336395|ref|XP_001375402.1| PREDICTED: similar to CaM-like protein kinase [Monodelphis domestica] Length = 892 Score = 39.7 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 58/157 (36%), Gaps = 3/157 (1%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ ++ +KR + EK R I ++E+ +R + ++ +A AE Sbjct: 142 RKSIPEVEEVAEKRRKS--IPEVEEAAEKRRKSIPEVEEAAEKRRESIPEVEEA-AEKRR 198 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 + ++ +E +P +E+ + + ++ + G+ E R Sbjct: 199 ESIPEVEEAAEKRRESIPEVEEAAEKRRKIIPEVEEGAEEEEHSKSGRGSREEEEEHSRG 258 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 + P ++ + G + D +S +R+ Sbjct: 259 GREIPIYDYVLPCAWHCGSREVVRDLAVPGGISQSRW 295 >gi|319892622|ref|YP_004149497.1| Glycyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317162318|gb|ADV05861.1| Glycyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] Length = 464 Score = 39.7 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 176 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 231 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + A L+ L L L D L + T D+E + Sbjct: 232 KPGTEIEWQNYWKDFAANWLESLGLAKENTRLRDHDEDELSHYSNATTDIEYRFPF--GW 289 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 290 GELWGIASRTDF 301 >gi|257887080|ref|ZP_05666733.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257895645|ref|ZP_05675298.1| prolyl-tRNA synthetase [Enterococcus faecium Com12] gi|293377744|ref|ZP_06623933.1| proline--tRNA ligase [Enterococcus faecium PC4.1] gi|257823134|gb|EEV50066.1| prolyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257832210|gb|EEV58631.1| prolyl-tRNA synthetase [Enterococcus faecium Com12] gi|292643744|gb|EFF61865.1| proline--tRNA ligase [Enterococcus faecium PC4.1] Length = 569 Score = 39.7 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 9/147 (6%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFC----TTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ P ++ E +G+ + +++ L PT E + T+L +EI K Sbjct: 68 EMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRNEINSYKK 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S E+S ++ E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKAYTE 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY 335 + KR L +R + G +G K + Sbjct: 184 VFKRCGLEFRSIIGDGGAMGGKDSKEF 210 >gi|229062588|ref|ZP_04199898.1| Glycyl-tRNA synthetase [Bacillus cereus AH603] gi|228716691|gb|EEL68387.1| Glycyl-tRNA synthetase [Bacillus cereus AH603] Length = 458 Score = 39.7 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 228 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEDELSHYSNATTDIEFRFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|227551759|ref|ZP_03981808.1| proline--tRNA ligase [Enterococcus faecium TX1330] gi|227179064|gb|EEI60036.1| proline--tRNA ligase [Enterococcus faecium TX1330] Length = 569 Score = 39.7 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 9/147 (6%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMFC----TTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ P ++ E +G+ + +++ L PT E + T+L +EI K Sbjct: 68 EMLMPAILPAELWEESGRYETYGPNLYRFKDRNDRKMILGPTHEETFTDLMRNEINSYKK 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S E+S ++ E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRFGLLRGREFIMKDAYSFHATEESLDETYKDYEKAYTE 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY 335 + KR L +R + G +G K + Sbjct: 184 VFKRCGLEFRSIIGDGGAMGGKDSKEF 210 >gi|154296368|ref|XP_001548615.1| hypothetical protein BC1G_13010 [Botryotinia fuckeliana B05.10] gi|150843371|gb|EDN18564.1| hypothetical protein BC1G_13010 [Botryotinia fuckeliana B05.10] Length = 1041 Score = 39.7 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 67/218 (30%), Gaps = 22/218 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRI-------LIKKIEDIRARRNSNSAQIGQA 61 ++ E L+K + +L+ KNR L K ++ +A R + + Sbjct: 356 KDKEEASETLRK--------EVKNLEVKNRQAQSRKTALQKSLQAKQAERKKMQDEQARW 407 Query: 62 IAEGNL--SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E + +++ E ++ E + E+ +++ + I E G Sbjct: 408 KKEMKSMGAEMESWSREAEEIR---TSTEAKCEELRENIRNVQDLITKFTREVAEKGLLV 464 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 R +RE +E E + ++ ++ A + L LE Sbjct: 465 KSLEEEREGLGIGLDDDQARE-WEALERRNDIQWEAESRTQHAIAQDYSQRLERLENE-L 522 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 Q T+ + + L+ G P Sbjct: 523 QAAQANFTALYARLPSNPSELMSHANSSGVDFDPNGQH 560 >gi|327313948|ref|YP_004329385.1| hypothetical protein HMPREF9137_1710 [Prevotella denticola F0289] gi|326945506|gb|AEA21391.1| conserved hypothetical protein [Prevotella denticola F0289] Length = 629 Score = 39.7 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 42/96 (43%), Gaps = 19/96 (19%) Query: 8 RQNPEHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRNS---------NS 55 R+ ++ L+K R + +LD + L+++ E ++ N+ S Sbjct: 540 RKRVDNFRNNLRKVADRGAD-------ALDNERGRLMRRFEQLKQEVNTYENNLGFLNIS 592 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 ++ G ++ + + LK++ +K+++ ++ E Sbjct: 593 SKKGNSLIDEMNRRIQRLKDDMEEVKQKIKAIDAEN 628 >gi|147843847|emb|CAN79450.1| hypothetical protein VITISV_004427 [Vitis vinifera] Length = 443 Score = 39.7 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 20/45 (44%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 + + SL+++ + L I+ ++ + ++ +A A G Sbjct: 217 KKVSSLEKERQDLQLTIDALQEEKKLLQKKVRKASANGKSIDASK 261 >gi|120538551|gb|AAI29854.1| Rabaptin, RAB GTPase binding effector protein 1 [Mus musculus] Length = 864 Score = 39.7 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|254976242|ref|ZP_05272714.1| hypothetical protein CdifQC_13044 [Clostridium difficile QCD-66c26] gi|255093629|ref|ZP_05323107.1| hypothetical protein CdifC_13354 [Clostridium difficile CIP 107932] gi|255315377|ref|ZP_05356960.1| hypothetical protein CdifQCD-7_13532 [Clostridium difficile QCD-76w55] gi|255518042|ref|ZP_05385718.1| hypothetical protein CdifQCD-_13081 [Clostridium difficile QCD-97b34] gi|255651158|ref|ZP_05398060.1| hypothetical protein CdifQCD_13296 [Clostridium difficile QCD-37x79] gi|260684224|ref|YP_003215509.1| hypothetical protein CD196_2490 [Clostridium difficile CD196] gi|260687883|ref|YP_003219017.1| hypothetical protein CDR20291_2537 [Clostridium difficile R20291] gi|306521007|ref|ZP_07407354.1| hypothetical protein CdifQ_15396 [Clostridium difficile QCD-32g58] gi|260210387|emb|CBA64774.1| putative exported protein [Clostridium difficile CD196] gi|260213900|emb|CBE05937.1| putative exported protein [Clostridium difficile R20291] Length = 232 Score = 39.7 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 17 ALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 ++ R + + L E+ + L + E++++ NS I + N D LK+E Sbjct: 29 NIENRGMTT-FKRGEQLTEELKSLKTEKENLQSEVNSVKKDIETYRGKNNKGEQDILKSE 87 Query: 77 TST 79 Sbjct: 88 IEK 90 >gi|57768826|ref|NP_001003522.1| TATA element modulatory factor [Danio rerio] gi|50417102|gb|AAH77134.1| TATA element modulatory factor 1 [Danio rerio] Length = 1136 Score = 39.7 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 10/106 (9%) Query: 4 IQWIRQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 I+ +R+ L R + E I +E+ R L+++ E + ++ +S I + Sbjct: 563 IKGLREE-------LASRLNSNETLELIKEKEEQIRELLEEGEKLSKQQLQHSNIIKKLR 615 Query: 63 AEGNLSLVDALK--NETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + S K + +E+L +L++ K+ I Sbjct: 616 VKERESDAQIAKQTKKLKEQEEELKLLQQVMDGKEEIEKQHRENIK 661 >gi|323464340|gb|ADX76493.1| glycyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 464 Score = 39.7 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 176 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 231 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + A L+ L L L D L + T D+E + Sbjct: 232 KPGTEIEWQNYWKDFAANWLESLGLAKENTRLRDHDEDELSHYSNATTDIEYRFPF--GW 289 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 290 GELWGIASRTDF 301 >gi|255008477|ref|ZP_05280603.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313146205|ref|ZP_07808398.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12] gi|313134972|gb|EFR52332.1| threonine-tRNA ligase [Bacteroides fragilis 3_1_12] Length = 646 Score = 39.7 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 46/167 (27%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEII-- 245 + Y EV P + +G K+ D F + + EI Sbjct: 287 RYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKN 346 Query: 246 ---ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LPLR R E + G+ R F + + R + E R+ Sbjct: 347 FPRSYKDLPLRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKGEFLRV 403 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + + +D + D E W + E Sbjct: 404 MDIISIVFRSMDFTNFEAQISLRDKVNREKYIGSDENWEKAEQAIIE 450 >gi|325680631|ref|ZP_08160173.1| NlpC/P60 family protein [Ruminococcus albus 8] gi|324107701|gb|EGC01975.1| NlpC/P60 family protein [Ruminococcus albus 8] Length = 501 Score = 39.7 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 42 KKIEDIRARRNSNSAQIGQAIAE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 ++E ++A++ + +I +A AE ++A K + + +K ++ +E + + ++ Sbjct: 48 SELESLKAQQKALDKKIEEAQAEIDKQKDDIEAQKAKYTAVKAKIDNVEDQLMKNEDAMV 107 Query: 100 K 100 + Sbjct: 108 E 108 >gi|306438537|emb|CAB05481.3| C. elegans protein F14H3.5, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 224 Score = 39.7 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 11/89 (12%) Query: 12 EHLDIALKKRHLEPQS--EYILSLD----EKNRILIKKIEDIRARRNS----NSAQIGQA 61 + L AL+ RH+E ++ + L+ E+ R L +++ R R S QI Q Sbjct: 120 QILQEALQARHIEIEAFDDEAERLNVLIVEERRNL-VELQAARKIRKSYLIVFQKQIAQL 178 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKE 90 AE + + + + +++ Sbjct: 179 KAENKDEEATPAQEQMTKKSLKRRRDDED 207 >gi|296331989|ref|ZP_06874453.1| hypothetical protein BSU6633_12802 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675617|ref|YP_003867289.1| hypothetical protein BSUW23_14715 [Bacillus subtilis subsp. spizizenii str. W23] gi|296150760|gb|EFG91645.1| hypothetical protein BSU6633_12802 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413861|gb|ADM38980.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 248 Score = 39.7 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 9/92 (9%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE-GNLS 68 P+ +K++ +L + + L K+ E + S S++ + + Sbjct: 59 EPDAAAANAEKKYS--------ALHAEYKSLTKEHEALEKEYKSVSSEAKKLKNNTEDQD 110 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + L+ E S LK+ L+ E + + KK Sbjct: 111 KLKQLEKENSELKKTQKSLQAEIKALQENQKK 142 >gi|229020149|ref|ZP_04176925.1| Glycyl-tRNA synthetase [Bacillus cereus AH1273] gi|228741158|gb|EEL91380.1| Glycyl-tRNA synthetase [Bacillus cereus AH1273] Length = 455 Score = 39.7 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 169 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 224 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 225 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFRFPF--GW 282 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 283 GELWGVASRTDFDLKR 298 >gi|218296446|ref|ZP_03497189.1| SMC domain protein [Thermus aquaticus Y51MC23] gi|218243240|gb|EED09771.1| SMC domain protein [Thermus aquaticus Y51MC23] Length = 962 Score = 39.7 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 17/97 (17%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILS----LDEKNRILIKKIEDIRARRNSNSA--QIGQA 61 R +PE L+ L+ E + E +LS L+E R L K + + R + + G+ Sbjct: 353 RLDPERLEAVLE---EEAKLERLLSGLSQLEEARRRLKAKEDQLEEARQRLAKTEEAGRE 409 Query: 62 IAEG--------NLSLVDALKNETSTLKEQLPILEKE 90 + + L+ L+E+L LEKE Sbjct: 410 KRKEVEDLKVRLQGAEAHRLQERLKALEEELRSLEKE 446 >gi|123472754|ref|XP_001319569.1| viral A-type inclusion protein [Trichomonas vaginalis G3] gi|121902355|gb|EAY07346.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3] Length = 940 Score = 39.7 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE-GNLSLVDALKNETSTLK 81 ++ + E I+ L +KN L ++ + +N QI + + + S + LK E + LK Sbjct: 175 IQVKDEEIIDLKQKNTDLSEQNNKLNEDKNELEKQIEELAQKLSDESEKEKLKQEINELK 234 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + EK+ ++ +L + ++ + + Sbjct: 235 SEKENSEKDFNKKLENLTQKVTELEDSIS 263 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 46/112 (41%), Gaps = 4/112 (3%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGN 66 QN E + K+ ++ ++ I +++K K+ +D++ + + ++ + E N Sbjct: 384 QNAEESEKNQKE--IDDLTQEIEEINQKLDEKQKENDDLKKEKENLQKEVDEIKKNFEEN 441 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + ++ L+ E LK+ + +E+ + +KK + Sbjct: 442 QNQIENLQKENDDLKKGMNQSSEEKQKEIEEIKKNFEEKQKEIDDLTQENEE 493 >gi|29345832|ref|NP_809335.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|73919769|sp|Q8AAP2|SYT_BACTN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|29337725|gb|AAO75529.1| threonyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] Length = 646 Score = 39.7 bits (91), Expect = 0.85, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 49/177 (27%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 Q + + + Y EV P + +G K+ D F + Sbjct: 277 LQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMN 336 Query: 238 NLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + EI K LPLR R E + G+ R F + + R Sbjct: 337 CPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + E R++ + + ++ + D + W + E Sbjct: 394 DQVKDEFLRVMDIISIVFRSMNFQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIE 450 >gi|163942630|ref|YP_001647514.1| glycyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|229135744|ref|ZP_04264516.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|163864827|gb|ABY45886.1| glycyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|228647710|gb|EEL03773.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST196] Length = 458 Score = 39.7 bits (91), Expect = 0.85, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 228 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEDELSHYSNATTDIEFRFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|289617128|emb|CBI56196.1| putative SGS1 protein [Sordaria macrospora] Length = 2276 Score = 39.7 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+ + LK+R + + +L E+++ +KK R + +I +A AE N Sbjct: 901 REEVKKEKEMLKRRDI-----ALKALQEEHKAYLKKS----KERQAIEDEISRAYAEEND 951 Query: 68 SLVDALKNETSTLKEQLPILE 88 D L + L +++ +E Sbjct: 952 EYEDQLMVQLDKLSDEVEAIE 972 >gi|289191674|ref|YP_003457615.1| seryl-tRNA synthetase [Methanocaldococcus sp. FS406-22] gi|288938124|gb|ADC68879.1| seryl-tRNA synthetase [Methanocaldococcus sp. FS406-22] Length = 520 Score = 39.7 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 92/292 (31%), Gaps = 57/292 (19%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 K G + L R L + +++ + G+ E P L+ E MY + Sbjct: 208 VKKFPGRGQWFYAPPITALFRVLEELIVEEVVKKIGFQECLFPKLIPLEIMYKMRYLEGL 267 Query: 216 ADDMFCTTDG---------------------------------RWLIPTSEVSLTNLYSH 242 + M+ L P + Sbjct: 268 PEGMYYVCPPKREPELFKEFVNEMMIKKEIPIEKLKTLLRDPGYVLAPAQCEPFYQFFEG 327 Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 E+I+ + F ++R E G A G+ R ++F + E V I E ++ Sbjct: 328 EVIDVDKPIMFFDRSGWTYRWEGGGAR----GLDRVNEFLRVECVWIGSPEFVEETRDKT 383 Query: 303 LSCAEEILKRLDLHYRV-----------VSLCTGDLGFSACKTYDLEVWLAGQNLYRE-- 349 L AE++ ++LDL Y V + F Y++ +WL R+ Sbjct: 384 LKYAEKLAEKLDLEYWVEVGDDPFYLEGRKKEDRGIEFPDVPKYEMRLWLPHIKDERKGV 443 Query: 350 -ISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 ++S + G R +D + T +G + R ++ L Y Sbjct: 444 AVTSANVHGTHFVE--GFRIKDYKGRK---VWT-GCTGYGITRWVVGYLAQY 489 >gi|166240195|ref|XP_001733045.1| hypothetical protein DDB_G0295475 [Dictyostelium discoideum AX4] gi|165988477|gb|EDR41026.1| hypothetical protein DDB_G0295475 [Dictyostelium discoideum AX4] Length = 569 Score = 39.7 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 9/119 (7%) Query: 4 IQWIRQNPEHLDIAL----KKRHLEPQSEYIL-----SLDEKNRILIKKIEDIRARRNSN 54 I I++ + L K R E +L+E+ L + ++ + + Sbjct: 125 IDDIKEKKDQYKDKLEQDLKDRKETFNQEKNKHLHHHNLNEEVDDLSNQFKEKKEQLKQG 184 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 S + + E + L + +K+++ LK+ L +++ +V K I + +E Sbjct: 185 SKSKFEKVKEKSKDLKENIKSKSHDLKDNLNSGKEDTEKVLEHTKDAIGDLKMKLMETF 243 >gi|300798383|ref|NP_001180090.1| rab GTPase-binding effector protein 1 [Bos taurus] gi|297486699|ref|XP_002695816.1| PREDICTED: rabaptin, RAB GTPase binding effector protein 1 [Bos taurus] gi|296476795|gb|DAA18910.1| rabaptin, RAB GTPase binding effector protein 1 [Bos taurus] Length = 862 Score = 39.7 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|332251225|ref|XP_003274748.1| PREDICTED: rab GTPase-binding effector protein 1 [Nomascus leucogenys] Length = 864 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 149 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 206 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 207 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 266 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 267 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 306 >gi|325853945|ref|ZP_08171461.1| hypothetical protein HMPREF9303_2053 [Prevotella denticola CRIS 18C-A] gi|325484282|gb|EGC87212.1| hypothetical protein HMPREF9303_2053 [Prevotella denticola CRIS 18C-A] Length = 629 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 42/96 (43%), Gaps = 19/96 (19%) Query: 8 RQNPEHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRNS---------NS 55 R+ ++ L+K R + +LD + L+++ E ++ N+ S Sbjct: 540 RKRVDNFRNNLRKVADRGAD-------ALDNERGRLMRRFEQLKQEVNTYENNLGFLNIS 592 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 ++ G ++ + + LK++ +K+++ ++ E Sbjct: 593 SKKGNSLIDEMNRRIQRLKDDMEEVKQKIKAIDAEN 628 >gi|330928862|ref|XP_003302431.1| hypothetical protein PTT_14235 [Pyrenophora teres f. teres 0-1] gi|311322250|gb|EFQ89491.1| hypothetical protein PTT_14235 [Pyrenophora teres f. teres 0-1] Length = 1132 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 L ++ + LDE+ L K+ E++R + + I + E N ++ K + ++ Sbjct: 680 LPANTDEMRHLDEQQNELTKEKEELRQKHAALGEDIKKLKEENN--ELNREKEQVQAEQD 737 Query: 83 QLPILEKEE 91 ++ + E Sbjct: 738 KMKKQQAEW 746 >gi|229014104|ref|ZP_04171225.1| Glycyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|229169638|ref|ZP_04297340.1| Glycyl-tRNA synthetase [Bacillus cereus AH621] gi|228613834|gb|EEK70957.1| Glycyl-tRNA synthetase [Bacillus cereus AH621] gi|228747058|gb|EEL96940.1| Glycyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 458 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 228 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEDELSHYSNATTDIEFRFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|229175609|ref|ZP_04303118.1| Glycyl-tRNA synthetase [Bacillus cereus MM3] gi|228607867|gb|EEK65180.1| Glycyl-tRNA synthetase [Bacillus cereus MM3] Length = 458 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 228 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFRFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|224538942|ref|ZP_03679481.1| hypothetical protein BACCELL_03839 [Bacteroides cellulosilyticus DSM 14838] gi|224519460|gb|EEF88565.1| hypothetical protein BACCELL_03839 [Bacteroides cellulosilyticus DSM 14838] Length = 862 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 39/105 (37%), Gaps = 12/105 (11%) Query: 12 EHLDIA--LKKRHLE--PQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA----- 61 + + A L R++ + + L DE L +++ + + S +I Q Sbjct: 366 DAIIAAVELSNRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIERE 425 Query: 62 --IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 E + ++ + E + LKEQ + + + + ++ Sbjct: 426 AIKRENDKPKLEQIGKELAELKEQEKSYKAKWQSEKTLVNRIQQN 470 >gi|218197260|gb|EEC79687.1| hypothetical protein OsI_20957 [Oryza sativa Indica Group] Length = 1032 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 38/100 (38%), Gaps = 10/100 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILS--------LDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + + LK + E + + + L+ K L K+ + +R +N S Sbjct: 456 EQLKSTIDDLKSKSAEAEMDALKDEYHQRVATLERKVYALTKERDTLRREQNKKSD--AA 513 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 A+ + ++ + E L ++ E ++ + +++ Sbjct: 514 ALLKEKDEIISQVMAEGEELSKKQAAQEATMRKLRAQVRE 553 >gi|123976198|ref|XP_001330808.1| viral A-type inclusion protein [Trichomonas vaginalis G3] gi|121896827|gb|EAY01967.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3] Length = 2098 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 2/85 (2%) Query: 18 LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKN 75 LK++ ++ + E+ +L +I +R+ S +I Q A E ++ALK Sbjct: 787 LKQKEIDALKKQFREKSEQFDLLNSEINKLRSENEEKSKEINQNKALIEEKTKEIEALKA 846 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKK 100 E + +Q+ L +E + + Sbjct: 847 ENAQKSQQINALSQENEQKKKQIDN 871 >gi|115465407|ref|NP_001056303.1| Os05g0559900 [Oryza sativa Japonica Group] gi|50878330|gb|AAT85105.1| unknown protein [Oryza sativa Japonica Group] gi|51854257|gb|AAU10638.1| unknown protein [Oryza sativa Japonica Group] gi|113579854|dbj|BAF18217.1| Os05g0559900 [Oryza sativa Japonica Group] gi|215695120|dbj|BAG90311.1| unnamed protein product [Oryza sativa Japonica Group] Length = 1032 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 38/100 (38%), Gaps = 10/100 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILS--------LDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + + LK + E + + + L+ K L K+ + +R +N S Sbjct: 456 EQLKSTIDDLKSKSAEAEMDALKDEYHQRVATLERKVYALTKERDTLRREQNKKSD--AA 513 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 A+ + ++ + E L ++ E ++ + +++ Sbjct: 514 ALLKEKDEIISQVMAEGEELSKKQAAQEATMRKLRAQVRE 553 >gi|238231439|ref|NP_062273.2| rab GTPase-binding effector protein 1 [Mus musculus] gi|56237880|emb|CAI26055.1| rabaptin, RAB GTPase binding effector protein 1 [Mus musculus] gi|120537320|gb|AAI29855.1| Rabaptin, RAB GTPase binding effector protein 1 [Mus musculus] gi|123233277|emb|CAM28155.1| rabaptin, RAB GTPase binding effector protein 1 [Mus musculus] gi|148680678|gb|EDL12625.1| rabaptin, RAB GTPase binding effector protein 1, isoform CRA_f [Mus musculus] Length = 862 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|53712976|ref|YP_098968.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|60681188|ref|YP_211332.1| threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|253563046|ref|ZP_04840503.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|265763073|ref|ZP_06091641.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|73919767|sp|Q5LEQ6|SYT_BACFN RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|73919768|sp|Q64VP2|SYT_BACFR RecName: Full=Threonyl-tRNA synthetase; AltName: Full=Threonine--tRNA ligase; Short=ThrRS gi|52215841|dbj|BAD48434.1| threonyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|60492622|emb|CAH07394.1| putative threonyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|251946822|gb|EES87104.1| threonyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|263255681|gb|EEZ27027.1| threonyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|301162677|emb|CBW22224.1| putative threonyl-tRNA synthetase [Bacteroides fragilis 638R] Length = 646 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 46/167 (27%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEII-- 245 + Y EV P + +G K+ D F + + EI Sbjct: 287 RYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKN 346 Query: 246 ---ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LPLR R E + G+ R F + + R + E R+ Sbjct: 347 FPRSYKDLPLRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKGEFLRV 403 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + + +D + D E W + E Sbjct: 404 MDIISIVFRSMDFDNFEAQISLRDKVNREKYIGSDENWEKAEQAIIE 450 >gi|47605961|sp|O35551|RABE1_MOUSE RecName: Full=Rab GTPase-binding effector protein 1; AltName: Full=Rabaptin-5; AltName: Full=Rabaptin-5alpha gi|2329849|dbj|BAA21783.1| rabaptin-5 [Mus musculus] Length = 862 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|320580038|gb|EFW94261.1| Oligomeric mitochondrial matrix chaperone [Pichia angusta DL-1] Length = 800 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 9/91 (9%) Query: 11 PEHLDIALK--KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A + E + + I LD + ++E +R ++ S + Sbjct: 318 IDLVDEACSALRLQHESKPDSIQELDRSIMTIQIELESLRKESDTLSKE-------RREK 370 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 L + LK + + LK I EK++ E+ + Sbjct: 371 LEEQLKYKQAELKRLTEIWEKQKQELDRIKQ 401 >gi|298384716|ref|ZP_06994276.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14] gi|298262995|gb|EFI05859.1| threonine--tRNA ligase [Bacteroides sp. 1_1_14] Length = 646 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 49/177 (27%), Gaps = 9/177 (5%) Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLT 237 Q + + + Y EV P + +G K+ D F + Sbjct: 277 LQEFLRRIQTRYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMN 336 Query: 238 NLYSHEII-----ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + EI K LPLR R E + G+ R F + + R Sbjct: 337 CPHHCEIYKNFPRSYKDLPLRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRP 393 Query: 293 EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + E R++ + + ++ + D + W + E Sbjct: 394 DQVKDEFLRVMDIISIVFRSMNFQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIE 450 >gi|291402753|ref|XP_002717729.1| PREDICTED: nuclear pore complex-associated protein TPR [Oryctolagus cuniculus] Length = 2814 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 40/100 (40%), Gaps = 4/100 (4%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 D+ IR E + L + ++ Q + I + + R + E+++A+++ Q Sbjct: 1854 DLNKIRTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQ 1913 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + G+ E LKE L E + + + ++ Sbjct: 1914 --SSGDHQEQHVSMQEMQELKETLNQAETKSKSLENQVEN 1951 >gi|303312857|ref|XP_003066440.1| DNA repair protein RAD50, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106102|gb|EER24295.1| DNA repair protein RAD50, putative [Coccidioides posadasii C735 delta SOWgp] Length = 1217 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 7/99 (7%) Query: 3 DIQWIRQ--NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +I+ +R+ N E + +++ + + ++++ L ++IE +RA + S ++ + Sbjct: 98 NIKALRKKQNEELAKYKIMEQYAKEDKDKADRAEKRSIQLQEEIEALRAESHELSKEMKK 157 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 A L D E+ + E L LE + EV S Sbjct: 158 A-----ADLADKAWKESESYAEILGALEGKRIEVKSIQT 191 >gi|154419315|ref|XP_001582674.1| mitochondrial-type HSP70 [Trichomonas vaginalis G3] gi|121916911|gb|EAY21688.1| mitochondrial-type HSP70, putative [Trichomonas vaginalis G3] Length = 629 Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 28/63 (44%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 D+K R +++K ++ N I + + L+ +++ LK+ + ++++ E Sbjct: 543 DKKKREILEKKYAMKQYINEIEKTISENEKKLPADLLKRIRDSVKDLKDAIAGNDEKKIE 602 Query: 94 VCS 96 Sbjct: 603 EKY 605 >gi|325117488|emb|CBZ53040.1| conserved hypothetical protein [Neospora caninum Liverpool] Length = 1884 Score = 39.7 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 35/124 (28%), Gaps = 10/124 (8%) Query: 35 EKNRILIKKI-EDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 E R++ + E +R RN + + VDAL+ E + L+E++ ++ E Sbjct: 1604 EALRVIQADLQEQLRHARNLL---------KSKDTQVDALREEVAELREEIRKEQERESH 1654 Query: 94 VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 + EE S I + D Sbjct: 1655 NLKDEPAKHTGEKTQTDEEEKRDESRESMHAIGELEAAHPTGDTQAHPEPPHAGSARRDG 1714 Query: 154 DRAT 157 + Sbjct: 1715 ETPH 1718 >gi|297679517|ref|XP_002817573.1| PREDICTED: ezrin-like isoform 2 [Pongo abelii] gi|332825351|ref|XP_003311613.1| PREDICTED: ezrin isoform 2 [Pan troglodytes] Length = 554 Score = 39.7 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 319 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 378 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 379 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 423 >gi|260431823|ref|ZP_05785794.1| ATP-dependent chaperone ClpB [Silicibacter lacuscaerulensis ITI-1157] gi|260415651|gb|EEX08910.1| ATP-dependent chaperone ClpB [Silicibacter lacuscaerulensis ITI-1157] Length = 872 Score = 39.7 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 13/84 (15%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A + +E S E + LD + L + E ++ ++ S Sbjct: 391 IDLVDEAAARLRMEVDSKPEELDQLDRQILQLQIEEEALKLEDDAASK-----------D 439 Query: 69 LVDALKNETSTLKEQLPILEKEEH 92 ++AL+ E + LKE+ + + Sbjct: 440 RLEALQKELAELKEKSAEMTAQWQ 463 >gi|222632536|gb|EEE64668.1| hypothetical protein OsJ_19523 [Oryza sativa Japonica Group] Length = 1025 Score = 39.7 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 38/100 (38%), Gaps = 10/100 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILS--------LDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + + LK + E + + + L+ K L K+ + +R +N S Sbjct: 456 EQLKSTIDDLKSKSAEAEMDALKDEYHQRVATLERKVYALTKERDTLRREQNKKSD--AA 513 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 A+ + ++ + E L ++ E ++ + +++ Sbjct: 514 ALLKEKDEIISQVMAEGEELSKKQAAQEATMRKLRAQVRE 553 >gi|145539868|ref|XP_001455624.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423432|emb|CAK88227.1| unnamed protein product [Paramecium tetraurelia] Length = 1003 Score = 39.7 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 10/105 (9%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 DIQ +++N E ++ E + ++N+ L +I + ++N Q+ Sbjct: 530 DIQELQENLE--KQKQDNQNNNDLDEQLNESKKQNQKLQDQINNTEQKQNKTQDQL---- 583 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + + +NE LK+Q+ EKE+ + + + L + Sbjct: 584 ----KNQLQDAQNEIKQLKDQIKEQEKEKKNLQNEVNNLNKECDD 624 >gi|256545559|ref|ZP_05472919.1| hypothetical protein HMPREF0078_1176 [Anaerococcus vaginalis ATCC 51170] gi|256398770|gb|EEU12387.1| hypothetical protein HMPREF0078_1176 [Anaerococcus vaginalis ATCC 51170] Length = 1192 Score = 39.7 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 4/102 (3%) Query: 3 DIQWIRQNPEHLD-IALKKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 D+Q I QN E+ ++ + LE E I L+E+ L +I ++ A N +I Sbjct: 717 DLQAINQNLENKKNENQERINKLEANKEEIQKLEEEKIALESEINNLTAEINELDNEIAN 776 Query: 61 AIAEGNL--SLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 I + L+N+ ++ ++L KE + + K Sbjct: 777 HIDSNKEYGEKLKKLENDLASTNKELDDKNKEIKTLEDTKTK 818 Score = 36.3 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 43/98 (43%), Gaps = 10/98 (10%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ +++ + L+ + ++ L+++ L +++ ++N N +I + Sbjct: 690 IEQLKKEIDALEKQIAAKNS--------ELEKEKEDLQAINQNLENKKNENQERINKL-- 739 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 E N + L+ E L+ ++ L E +E+ + + Sbjct: 740 EANKEEIQKLEEEKIALESEINNLTAEINELDNEIANH 777 >gi|320102257|ref|YP_004177848.1| ATP-dependent chaperone ClpB [Isosphaera pallida ATCC 43644] gi|319749539|gb|ADV61299.1| ATP-dependent chaperone ClpB [Isosphaera pallida ATCC 43644] Length = 883 Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 23/96 (23%) Query: 3 DIQWIRQNP-----------EHLDIALKKRHLEPQSEYILSL---DEKNRILIKKIEDIR 48 D+Q +R+ + A + R P L L D++ R L K++ED+ Sbjct: 472 DVQELRERLAALTTQYDRAWNEIRQAQQ-RGERPDESAFLELAKLDQERRDLAKRLEDLE 530 Query: 49 ARRNS--------NSAQIGQAIAEGNLSLVDALKNE 76 ++ N+ S E + + + + Sbjct: 531 SQENAQASASETTASGGKRLLKREVDQEEIAEVVAQ 566 >gi|282883285|ref|ZP_06291882.1| putative GA module [Peptoniphilus lacrimalis 315-B] gi|281296870|gb|EFA89369.1| putative GA module [Peptoniphilus lacrimalis 315-B] Length = 969 Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 32/86 (37%), Gaps = 8/86 (9%) Query: 8 RQNPEHLDIALKKRHLEPQSEYI----LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 ++ + +L+ ++ + + D++ + K+ +++ ++N +I +A Sbjct: 770 KEKKDEYISSLESKNTIEDINGVYTTAKAKDDEIKE-QKEKDNLANKKNELGNKISEAKK 828 Query: 64 EGNLSLVDALKNETSTLKEQLPILEK 89 + L L ++ E Sbjct: 829 LIKSDNLSDL---AKELSVEITSAES 851 >gi|221042722|dbj|BAH13038.1| unnamed protein product [Homo sapiens] Length = 554 Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 319 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 378 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 379 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 423 >gi|212697035|ref|ZP_03305163.1| hypothetical protein ANHYDRO_01600 [Anaerococcus hydrogenalis DSM 7454] gi|212675810|gb|EEB35417.1| hypothetical protein ANHYDRO_01600 [Anaerococcus hydrogenalis DSM 7454] Length = 166 Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 50/178 (28%), Gaps = 21/178 (11%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNS------N 54 M DI+ IR+N +D + I+ L E+ L KK+ + N Sbjct: 1 MDDIKDIRENINKVD------------DKIIKLLEERFDLSKKVRAYKISHNKKVYDPIR 48 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV- 113 +I + I E N + +Q L++ + KKL + E++ Sbjct: 49 EKEILKKIQEKNPEYGKYFVKIYQEIMDQSKNLQRNDKNYGLLGKKLGHSYSKIIHEKIG 108 Query: 114 -PIGTSANENILIRSVGKKPSAIHLSREHFEIGEA-LGLMDFDRATKLSGARFSVLTG 169 +N + E + +DF Sbjct: 109 YYDYQYFEKNQEDLDDFFEKKDFKGINVTIPYKEKVIKYLDFVSNKAKKNWGCKYNCK 166 >gi|189238120|ref|XP_001814158.1| PREDICTED: similar to ZC477.3a [Tribolium castaneum] gi|270008735|gb|EFA05183.1| hypothetical protein TcasGA2_TC015313 [Tribolium castaneum] Length = 273 Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 52/148 (35%), Gaps = 2/148 (1%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 + + + + + + E +L EK R + + + DIR R N +I + + NL Sbjct: 56 HLDEVKLYQDR--VVALQERLLEAQEKRREIGRSLADIRKRSNQLQDEIHKVKRQENLER 113 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 L E + + Q + + E + ++L + N + + E + Sbjct: 114 FLTLMKEETEVLRQESEVMRSFQECDRAERELFTAFTNAVRDSHEKQRAQVEYTKYFGII 173 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRAT 157 + L+ + + + + + Sbjct: 174 LSITGSFLAFCYTTLRKDDLKRFIEESM 201 >gi|323127587|gb|ADX24884.1| membrane protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 488 Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 31/77 (40%), Gaps = 5/77 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + I ++++ + L +K + + +++ + L++E +LKE+ Sbjct: 151 ELSKDDISKMEKEAKELQEKFDKLNGELKDKDK-----LSDKQKEKIKDLEDEIESLKEK 205 Query: 84 LPILEKEEHEVCSSLKK 100 + + + K+ Sbjct: 206 MKKDKGNKDLSEDMKKE 222 >gi|281348092|gb|EFB23676.1| hypothetical protein PANDA_015360 [Ailuropoda melanoleuca] Length = 1754 Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 44/116 (37%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L ++ +R L+ I + +++ + L ++ E+ Sbjct: 487 LEIKTLKEEIEKLRKQVRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIKTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|301780766|ref|XP_002925800.1| PREDICTED: serine/threonine-protein kinase MRCK alpha-like isoform 1 [Ailuropoda melanoleuca] Length = 1719 Score = 39.7 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 44/116 (37%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L ++ +R L+ I + +++ + L ++ E+ Sbjct: 487 LEIKTLKEEIEKLRKQVRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIKTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|289523325|ref|ZP_06440179.1| hypothetical protein HMPREF1705_01258 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503017|gb|EFD24181.1| hypothetical protein HMPREF1705_01258 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 394 Score = 39.7 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 34/81 (41%), Gaps = 13/81 (16%) Query: 5 QWIRQNPE---HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 + + +N + ++ + + + + L+ R L ++E+++ R++ QI + Sbjct: 126 KDLAENLDRLHQVEEEVARLN-----DKARELEVDKRKLSGELEEMKKERDNLEGQIAEL 180 Query: 62 IAEGNLSLVDALKNETSTLKE 82 A+ L+ +KE Sbjct: 181 KAQ-----AAELRENLERVKE 196 >gi|303321544|ref|XP_003070766.1| hypothetical protein CPC735_038850 [Coccidioides posadasii C735 delta SOWgp] gi|240110463|gb|EER28621.1| hypothetical protein CPC735_038850 [Coccidioides posadasii C735 delta SOWgp] Length = 1252 Score = 39.7 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 72/238 (30%), Gaps = 16/238 (6%) Query: 5 QWIRQNPEHLDIALK--KRHLEPQSEYILSLDEKNRIL---IKKIEDIRARRNSNSAQIG 59 + + + ++ + R I L++K R L ++E + + ++ Sbjct: 734 KELEEKQSEVEAKQEEINRLKSELESKIAELEDKRRELEQKQGELESKQTELQAIQDELQ 793 Query: 60 QAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + A E S +++ + + +E+L + E +V ++ + E+ Sbjct: 794 EVKAELEEKKSQLESKQADLDKKQEELTAKQAELDDVKEKHAAELAALRAQLEEQTNATK 853 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +E I + + ++ DF+ + V L Sbjct: 854 ERDEKIEAMTTEHQQKEEQWQKDR---------GDFEAQLQEKTEELKVALEEKEALAVD 904 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVS 235 L + + L E + T A DM D ++ E+S Sbjct: 905 GKNREERLQSIVEEMRQTHDNLNKDRERLKKTLHSLGEATDMKIKGDAFFVDCFGELS 962 >gi|228476027|ref|ZP_04060735.1| glycine--tRNA ligase [Staphylococcus hominis SK119] gi|314936314|ref|ZP_07843661.1| glycine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|228269850|gb|EEK11330.1| glycine--tRNA ligase [Staphylococcus hominis SK119] gi|313654933|gb|EFS18678.1| glycine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 463 Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 16/184 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + LK L+++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASQWLKDLNINEENMRLRDHDEEELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNFQSRR------MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 E+ ++ +F ++ + RY DP + + + S A R +A L + Sbjct: 289 GELWGIASRTDFDLKKHSEHSGEDFRYHDPETNEKYIPYCIEPSLGA-DRVTLAFLCDAY 347 Query: 402 NADG 405 + +G Sbjct: 348 DEEG 351 >gi|47551235|ref|NP_999798.1| amassin [Strongylocentrotus purpuratus] gi|28453877|gb|AAO43562.1| amassin [Strongylocentrotus purpuratus] Length = 495 Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 14/208 (6%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 E + LK+ + E I + + I +++ +R N+ + I Q + Sbjct: 133 ELELVKEELKE--MSLLLERIEEVASE----IPEVQQLREELNNFTELIKQLEVT-RPTE 185 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL----- 124 V L+ + LK +L E+ SL + S P+ I S + Sbjct: 186 VRVLQRKIDDLKSKLAECERYTRTEDESLFQPWSDFPSQDSCRDIIHVSEPFTVRGVGNK 245 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 I + + P ++ + DR ++ R H L L Sbjct: 246 IGAWFRDPLQDYIKVYYAPFHNPRLTYQVDRFAHVADFRGGTEYEHRYMLPTNLPAQGPG 305 Query: 185 LHTSEHG--YTEVSAPLLVRDEAMYGTG 210 + Y + +VR + T Sbjct: 306 MVAYNGSLYYHAFQSRQIVRYDLENHTV 333 >gi|315230679|ref|YP_004071115.1| DNA double-strand break repair rad50 ATPase [Thermococcus barophilus MP] gi|315183707|gb|ADT83892.1| DNA double-strand break repair rad50 ATPase [Thermococcus barophilus MP] Length = 883 Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 17/114 (14%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYI--------------LSLDEKNRILIKKIEDIRA 49 I I+ N ++ LK E + + L L + L + E ++ Sbjct: 567 ISEIKANLYEYEVKLKNLGFE-DIDTLKAEIGMLKPIYEKYLKLLNSQKELKAEKERLQR 625 Query: 50 RRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 +N +I + G + +K L++ E E K+ Sbjct: 626 DKNEL--EILKEKKAGLEKALSEIKERLGELEKDYSKDEHERVRKEHIKKREAL 677 >gi|195029593|ref|XP_001987656.1| GH22039 [Drosophila grimshawi] gi|193903656|gb|EDW02523.1| GH22039 [Drosophila grimshawi] Length = 2021 Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + I L+ K + L +++D+ + + + + S + LK + Sbjct: 1535 RELDEAYDKIEDLETKRKQLQNELDDVANTQGTADKNVHELEKAKRALESQLAELKAQNE 1594 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L S Sbjct: 1595 ELEDDLQLTEDAKLRLEVNMQALRSQFE 1622 >gi|148680677|gb|EDL12624.1| rabaptin, RAB GTPase binding effector protein 1, isoform CRA_e [Mus musculus] Length = 778 Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 63 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 120 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 121 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 180 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 181 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 220 >gi|2696101|dbj|BAA23818.1| neurocrescin [Mus musculus] Length = 778 Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 63 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 120 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 121 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 180 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 181 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 220 >gi|320040240|gb|EFW22173.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 1259 Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 72/238 (30%), Gaps = 16/238 (6%) Query: 5 QWIRQNPEHLDIALK--KRHLEPQSEYILSLDEKNRIL---IKKIEDIRARRNSNSAQIG 59 + + + ++ + R I L++K R L ++E + + ++ Sbjct: 741 KELEEKQSEVEAKQEEINRLKSELESKIAELEDKRRELEQKQGELESKQTELQAIQDELQ 800 Query: 60 QAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + A E S +++ + + +E+L + E +V ++ + E+ Sbjct: 801 EVKAELEEKKSQLESKQADLDKKQEELTAKQAELDDVKEKHAAELAALRAQLEEQTNATK 860 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 +E I + + ++ DF+ + V L Sbjct: 861 ERDEKIEAMTTEHQQKEEQWQKDR---------GDFEAQLQEKTEELKVALEEKEALAVD 911 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVS 235 L + + L E + T A DM D ++ E+S Sbjct: 912 GKNREERLQSIVEEMRQTHDNLNKDRERLKKTLHSLGEATDMKIKGDAFFVDCFGELS 969 >gi|291563934|emb|CBL42750.1| glycyl-tRNA synthetase, dimeric type [butyrate-producing bacterium SS3/4] Length = 462 Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 58/190 (30%), Gaps = 13/190 (6%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 + + +++ D + + + M+ T Q +D T T+ Sbjct: 121 WSQEQMKKYIDDNQIPCPSCGKHDFTDIRQFNLMFKTFQ--GVTEDAKNT--VYLRPETA 176 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + + K +P + SFR+E R +F + EL + Sbjct: 177 QGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKP 232 Query: 293 EDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + L+ L + R +L F + T DLE + E Sbjct: 233 GTDLDWFAYWKQYCIKWLQDLGIKPDEMRARDHSPEELCFYSKATTDLEFLFPF--GWGE 290 Query: 350 ISSCSTCGNF 359 + + ++ Sbjct: 291 LWGIADRTDY 300 >gi|297291462|ref|XP_002803901.1| PREDICTED: ezrin-like isoform 2 [Macaca mulatta] Length = 554 Score = 39.7 bits (91), Expect = 0.94, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 319 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 378 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 379 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 423 >gi|325290419|ref|YP_004266600.1| chromosome segregation protein SMC [Syntrophobotulus glycolicus DSM 8271] gi|324965820|gb|ADY56599.1| chromosome segregation protein SMC [Syntrophobotulus glycolicus DSM 8271] Length = 1198 Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Query: 8 RQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IGQAIAE 64 R+ + A++ +R +E +E IL+LD + + L++ + + + S + I A + Sbjct: 688 REIEDLKKEAIEIQREMEALTEQILTLDREIKTLVQAEDQLETEQKEISEKRHIQAADKK 747 Query: 65 GNLSLVDALKNETSTLKEQLPILEKE 90 L+ E L QL LE Sbjct: 748 YLEQKQQQLEKEEKLLDYQLTELEHN 773 >gi|189241063|ref|XP_967018.2| PREDICTED: similar to restin (Reed-Steinberg cell-expressed intermediate filament-associated protein) [Tribolium castaneum] Length = 4854 Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 47/120 (39%), Gaps = 10/120 (8%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYIL------SLDEKN---RILIKKIEDIRARRNSN 54 I+ +R E + L + + + + + +L++ + I ++E+ + N Sbjct: 605 IKSLRDELETVRKELGHKTDDLERQRVNLHEVEANLEQARGELKEKITEVENTKKECNLQ 664 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 +Q Q I++ N ++ + E L ++L ++ + + + + ++ Sbjct: 665 VSQKDQQISDANKTIAER-SEEIKKLAKELEDVKHTFEDSKNEIHSRHARQVASQDSQLM 723 >gi|150021573|ref|YP_001306927.1| binding-protein-dependent transport systems inner membrane component [Thermosipho melanesiensis BI429] gi|149794094|gb|ABR31542.1| binding-protein-dependent transport systems inner membrane component [Thermosipho melanesiensis BI429] Length = 426 Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 16/107 (14%) Query: 3 DI-QWIRQNPE-HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 DI +++R + L E Q + + L +N+ KIE +R+ R+ QI + Sbjct: 88 DIQKFVRNKTNSTIKKEL----FEAQVKKLKQLILENKD---KIELLRSERDKIKRQINR 140 Query: 61 A-------IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 ++ ++ ++ +K+Q+ E+++ E L+K Sbjct: 141 LTVETVRLKSQLEIAEKANMQEFIDMIKKQIESNEQKKSEFEKDLEK 187 >gi|225007564|ref|NP_001034736.2| guanylate binding protein 11 [Mus musculus] gi|148688254|gb|EDL20201.1| mCG3631, isoform CRA_a [Mus musculus] gi|148688255|gb|EDL20202.1| mCG3631, isoform CRA_a [Mus musculus] Length = 619 Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 36/96 (37%), Gaps = 14/96 (14%) Query: 6 WIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQI 58 +R + + A +KR+ E +L++ R L+++ E + N + Sbjct: 500 LLRQKQKEQQKYMEAQEKRNKE-------NLEQLRRKLMQEREQLIKDHNMMLEKLMKEQ 552 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 + EG + ++ E L+ + +++ Sbjct: 553 KALLEEGYKKKAEEMRREIYRLRHNIKDMKQNSDFF 588 >gi|121998001|ref|YP_001002788.1| Fis family transcriptional regulator [Halorhodospira halophila SL1] gi|121589406|gb|ABM61986.1| transcriptional regulator, Fis family [Halorhodospira halophila SL1] Length = 382 Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 3/83 (3%) Query: 4 IQWIRQNPEHLDIALK-KRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQIGQA 61 ++ +R + E + L R + E LS L+ + +++E +RA R ++ + Sbjct: 35 LEALRDDLEAIQEDLAADRAARDEVEEALSQLERQVSEATRELERLRAERAEARGRVAEL 94 Query: 62 IAEGNLSLVDALKNETSTLKEQL 84 E + L TL EQ+ Sbjct: 95 -REDYAEEAERLGRHRETLAEQI 116 >gi|325287312|ref|YP_004263102.1| DNA gyrase subunit A [Cellulophaga lytica DSM 7489] gi|324322766|gb|ADY30231.1| DNA gyrase, A subunit [Cellulophaga lytica DSM 7489] Length = 851 Score = 39.7 bits (91), Expect = 0.96, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 14/170 (8%) Query: 4 IQWIR--QNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIK-KIEDIRARRNSNSAQI 58 I IR N + L KR E Q++ I+ + + R L + + +RA + I Sbjct: 391 IAIIRGSSNADEARENLIKRFELSEIQAKAIVEM--RLRQLTGLEQDKLRAEYDEIIKTI 448 Query: 59 GQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + +K+E +KE+ E + +S +P E+V I Sbjct: 449 ADLKDILANEERRMQIIKDELLEVKEK---YGDERRSEINFAGGDLSIEDMIPDEQVVIT 505 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 S I + + + + DF + + Sbjct: 506 ISHAGYIKRTPLSEYKTQNRGGVGQ--KASSTRNEDFLEHLFVGTNHQYM 553 >gi|192824204|ref|YP_001994845.1| gp28 [Mycobacterium phage Pukovnik] gi|190610434|gb|ACE79954.1| gp28 [Mycobacterium phage Pukovnik] Length = 798 Score = 39.7 bits (91), Expect = 0.96, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 36/80 (45%), Gaps = 9/80 (11%) Query: 10 NPEHLDIALK-----KRHLEPQSEYILSLDEK-NRILIKKIEDIRARRNSNSAQIGQAIA 63 + + L ++ K+ L+ + + D++ + L +I+ ++A+++ S Q + Sbjct: 652 DADELKQSMALIEQEKKRLKIEKNSLPDSDKEGRKALQNQIDQLQAQKDILSYQKDRLKN 711 Query: 64 E---GNLSLVDALKNETSTL 80 E G+ + D L S L Sbjct: 712 EKEYGDAAGDDPLVKAASKL 731 >gi|148377386|ref|YP_001256262.1| prolyl-tRNA synthetase [Mycoplasma agalactiae PG2] gi|148291432|emb|CAL58817.1| Prolyl tRNA synthetase (Proline tRNA ligase) [Mycoplasma agalactiae PG2] Length = 478 Score = 39.7 bits (91), Expect = 0.96, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 13/189 (6%) Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 ++ PTSEV +L+ I+ K LP+ + A R E + T LR +F E Sbjct: 107 YVRPTSEVLFADLFKKMIVSHKDLPILYNQWANVVRWE-----KTTNPFLRSREFLWQEG 161 Query: 287 VSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + + E E + A+ + L + + + AC TY +E + Sbjct: 162 HTCHKSAIEARKLTREMINVYAKFLKNYLAIPTIIGKKTPYEKFAGACSTYTVEAMMKDG 221 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENYLNA 403 + +S NF S+R +++ ++ +F + + V R L AI+ + + Sbjct: 222 KALQAGTSHYLAQNF-SKRFEISFKNDKNED-EFVYQ---TSWGVSTRLLGAIIMTHGDN 276 Query: 404 DGSVTIPTV 412 G + P V Sbjct: 277 RGIIIPPKV 285 >gi|224062404|ref|XP_002197337.1| PREDICTED: cingulin-like 1 [Taeniopygia guttata] Length = 1295 Score = 39.7 bits (91), Expect = 0.97, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 4/77 (5%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDAL 73 A +KR+ + L E+N+ L + + ++ + QI E N ++ Sbjct: 804 AAQEKRNSVEN--QVKELIEENKQLKRTLTELERKIEELHKQIDNMKGEENSLKEKLETY 861 Query: 74 KNETSTLKEQLPILEKE 90 + E L+E L E E Sbjct: 862 EKEKQQLEEALKHAEME 878 >gi|1597734|gb|AAB09772.1| mitochondrial-type HSP70 [Trichomonas vaginalis] Length = 609 Score = 39.7 bits (91), Expect = 0.97, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 28/63 (44%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 D+K R +++K ++ N I + + L+ +++ LK+ + ++++ E Sbjct: 523 DKKKREILEKKYAMKQYINEIEKTISENEKKLPADLLKRIRDSVKDLKDAIAGNDEKKIE 582 Query: 94 VCS 96 Sbjct: 583 EKY 585 >gi|331002910|ref|ZP_08326423.1| glycyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] gi|330413203|gb|EGG92577.1| glycyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] Length = 462 Score = 39.7 bits (91), Expect = 0.98, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 175 TAQGIFVNFKNVQRTSRKKVPFGIGQVGKSFRNEI----TPGNFTFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + S L L + + L D L F + T D+E + Sbjct: 231 KPGTDLEWFDYWRSYCINWLTSLGIREDQMRLRDHDKEELSFYSNATTDIEFLFPF--GW 288 Query: 348 REISSCSTCGNFQSRR 363 E+ + ++ R Sbjct: 289 GELWGIADRTDYDLNR 304 >gi|148242264|ref|YP_001227421.1| putative ATPase involved in DNA repair [Synechococcus sp. RCC307] gi|147850574|emb|CAK28068.1| Putative ATPase involved in DNA repair [Synechococcus sp. RCC307] Length = 853 Score = 39.7 bits (91), Expect = 0.98, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 4 IQWIRQNPEHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS----- 55 + +RQ LD L R P + + + + R LI + +R+++ + + Sbjct: 448 LNQLRQTKALLDQQLSAALQRWNLPDVKAAKASERERRELIAEWRQLRSQQGAIAVDQLR 507 Query: 56 AQIGQAIAEGNLSLVDALKNETSTL 80 QI + + L+ + L Sbjct: 508 QQIAALPEPPKDADLSQLREQLDAL 532 >gi|42760014|emb|CAF31523.1| type II hair keratin 2 [Homo sapiens] Length = 513 Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L ++ E+++A+R I +A +G +L DA K Sbjct: 327 DNLRNRK-----NEILEMNKLIQRLQQETENVKAQRCKLEGAIAEAEQQGEAALNDA-KC 380 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 381 KLAGLEEALQKAKQDMACLLKEYQEVM 407 >gi|27477127|ref|NP_149022.3| keratin, type II cuticular Hb2 [Homo sapiens] gi|148887391|sp|Q9NSB4|KRT82_HUMAN RecName: Full=Keratin, type II cuticular Hb2; AltName: Full=Keratin-82; Short=K82; AltName: Full=Type II hair keratin Hb2; AltName: Full=Type-II keratin Kb22 gi|119617030|gb|EAW96624.1| keratin, hair, basic, 2 [Homo sapiens] gi|151555053|gb|AAI48498.1| Keratin 82 [synthetic construct] gi|157170318|gb|AAI53100.1| Keratin 82 [synthetic construct] gi|261857636|dbj|BAI45340.1| keratin 82 [synthetic construct] Length = 513 Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L ++ E+++A+R I +A +G +L DA K Sbjct: 327 DNLRNRK-----NEILEMNKLIQRLQQETENVKAQRCKLEGAIAEAEQQGEAALNDA-KC 380 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 381 KLAGLEEALQKAKQDMACLLKEYQEVM 407 >gi|313891017|ref|ZP_07824638.1| putative lipoprotein [Streptococcus pseudoporcinus SPIN 20026] gi|313120641|gb|EFR43759.1| putative lipoprotein [Streptococcus pseudoporcinus SPIN 20026] Length = 514 Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 31/78 (39%), Gaps = 5/78 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + I +++ + L +K+ + + +++ + L+ + +LKE+ Sbjct: 153 ELSKDDISKMEKDAKELQEKLNKLNSEIKDKDK-----LSDKQKEKIKELEAQIESLKEK 207 Query: 84 LPILEKEEHEVCSSLKKL 101 ++ + K++ Sbjct: 208 TKKDKENKDLSEDMKKEM 225 >gi|288924732|ref|ZP_06418669.1| conserved hypothetical protein [Prevotella buccae D17] gi|288338519|gb|EFC76868.1| conserved hypothetical protein [Prevotella buccae D17] Length = 622 Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 49/104 (47%), Gaps = 12/104 (11%) Query: 2 LDIQWIRQNPEHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 L+I R+ ++ LK R ++ +LD + L+++ E ++ N+ + Sbjct: 526 LNISVARRKLDNFKSNLKNVAERGVD-------ALDNERGRLMRRYEGLKQEINTYENNL 578 Query: 59 G--QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 G A ++ SL+D + + LK+ + +++++ + + K+ Sbjct: 579 GFLNASSKKGNSLIDEMNRKVQKLKDDMELVKQKIKAIDAENKE 622 >gi|242091131|ref|XP_002441398.1| hypothetical protein SORBIDRAFT_09g025900 [Sorghum bicolor] gi|241946683|gb|EES19828.1| hypothetical protein SORBIDRAFT_09g025900 [Sorghum bicolor] Length = 913 Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 12/103 (11%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKARLVEVKKELDD 453 Query: 69 LVDAL----------KNETSTLKEQLPILEKEEHEVCSSLKKL 101 L D L K +++ E+ + + + +++ Sbjct: 454 LRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFSLQEAERRM 496 >gi|229026377|ref|ZP_04182734.1| Glycyl-tRNA synthetase [Bacillus cereus AH1272] gi|228734840|gb|EEL85478.1| Glycyl-tRNA synthetase [Bacillus cereus AH1272] Length = 487 Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 201 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 256 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 257 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFRFPF--GW 314 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 315 GELWGVASRTDFDLKR 330 >gi|229032557|ref|ZP_04188522.1| Glycyl-tRNA synthetase [Bacillus cereus AH1271] gi|228728742|gb|EEL79753.1| Glycyl-tRNA synthetase [Bacillus cereus AH1271] Length = 487 Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 201 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 256 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 257 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFRFPF--GW 314 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 315 GELWGVASRTDFDLKR 330 >gi|221118083|ref|XP_002161493.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 554 Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 48/113 (42%), Gaps = 11/113 (9%) Query: 8 RQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARR-------NSNSAQI 58 R + + + +KK++ E + I L ++N L++ +E+ + NS + Sbjct: 188 RTDVDEIREQIKKKNKEMSQYLDDIKQLQDENDKLVQDVENAKKELEQATQDMNSITDDY 247 Query: 59 GQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 G+ E ++++ ++ E L+ Q+ + + + K+++ + Sbjct: 248 GKLKVILEDTDAVLEEMRKERDILRSQIHDMTVQLQKQTDGDDKIMNELNQKV 300 >gi|83405039|gb|AAI11040.1| Predicted gene, EG634650 [Mus musculus] Length = 619 Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 36/96 (37%), Gaps = 14/96 (14%) Query: 6 WIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQI 58 +R + + A +KR+ E +L++ R L+++ E + N + Sbjct: 500 LLRQKQKEQQKYMEAQEKRNKE-------NLEQLRRKLMQEREQLIKDHNMMLEKLMKEQ 552 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 + EG + ++ E L+ + +++ Sbjct: 553 KALLEEGYKKKAEEMRREIYRLRHNIKDMKQNSDFF 588 >gi|22798968|emb|CAB76827.2| type II hair keratin 2 [Homo sapiens] Length = 513 Score = 39.7 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L ++ E+++A+R I +A +G +L DA K Sbjct: 327 DNLRNRK-----NEILEMNKLIQRLQQETENVKAQRCKLEGAIAEAEQQGEAALNDA-KC 380 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 381 KLAGLEEALQKAKQDMACLLKEYQEVM 407 >gi|304438821|ref|ZP_07398747.1| chaperone protein ClpB [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372704|gb|EFM26284.1| chaperone protein ClpB [Peptoniphilus duerdenii ATCC BAA-1640] Length = 861 Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 13/80 (16%) Query: 29 YILSLDEKNRILIKKIEDIRARR-NSNSAQIGQAIA------------EGNLSLVDALKN 75 ILSL+ + L K+ ++ A+R S +I + + + +L V +K Sbjct: 417 AILSLEIEREALKKETDEASAKRLASIEKEISEKKSDYDLLKAKWEQEKKDLDSVKEIKE 476 Query: 76 ETSTLKEQLPILEKEEHEVC 95 + +K Q+ E+ Sbjct: 477 KIEDIKHQIEEAERSYDLEK 496 >gi|149633949|ref|XP_001506981.1| PREDICTED: similar to hCG29188 [Ornithorhynchus anatinus] Length = 1181 Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 2 LDIQ---------WIRQNPEHLDIALKKRHLEPQSEYIL---SLDEKNRILIKKIEDIRA 49 LD++ +R E L+ L R + + +DE + ++++ +R Sbjct: 756 LDLKVTSLEEELTDLRVEKELLEKNLADRKKKSAQDRCQAEEEMDEIRKSHQEELDKLRH 815 Query: 50 RRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 +A + + + L + L Q E + + +S+K+ Sbjct: 816 LLK-------KARVSTDQAAAEQLSQVQAELTSQ---WEAKCERLVASVKEQHLQQYQEA 865 Query: 110 LEE 112 E+ Sbjct: 866 CEQ 868 >gi|73966442|ref|XP_866099.1| PREDICTED: similar to sperm associated antigen 9 isoform 1 isoform 11 [Canis familiaris] Length = 1310 Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|308503366|ref|XP_003113867.1| CRE-VPS-33.2 protein [Caenorhabditis remanei] gi|308263826|gb|EFP07779.1| CRE-VPS-33.2 protein [Caenorhabditis remanei] Length = 595 Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 4/106 (3%) Query: 2 LDIQWIRQNPEHLDIAL-KKRHLEPQSEYILSLDE--KNRILIKKIEDIRARRNSNSAQI 58 LD WI NPE AL + R + + + +N+ + +E + A+ S I Sbjct: 268 LDFDWIEINPEEDKEALQQNRGDVVKLDNCEDIFASIRNKHVTAALEFLHAKAKSIQKSI 327 Query: 59 GQ-AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + A+ + + ++ + LK+ E + + K+ Sbjct: 328 EKSAMIDDVADYRNFVEKDLRALKKDHKHCELHINACEMMMNKVKM 373 >gi|242768440|ref|XP_002341569.1| heat shock protein/chaperonin HSP78, putative [Talaromyces stipitatus ATCC 10500] gi|218724765|gb|EED24182.1| heat shock protein/chaperonin HSP78, putative [Talaromyces stipitatus ATCC 10500] Length = 791 Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQ---IGQAIAEGNLSLVDALKNETSTLKEQL 84 + I LD + + ++E +R + S + + + + V L + KE++ Sbjct: 332 DSIQELDREITTIQIELESLRKETDVTSKERRAKLEEMLKAKREEVSKLMEIWNKEKEEI 391 Query: 85 PILEKEEHEVCSSLKK 100 +++ + E+ S + Sbjct: 392 ESIKRTKQELEQSRFE 407 >gi|329955552|ref|ZP_08296460.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056] gi|328525955|gb|EGF52979.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056] Length = 864 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 12/105 (11%) Query: 12 EHLDIA--LKKRHLE--PQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA----- 61 + + A L R++ + + L DE L +++ + + S +I Q Sbjct: 366 DAIIAAVELSNRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIERE 425 Query: 62 --IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 E + ++ + E + LKEQ + + + + K+ Sbjct: 426 AIKRENDQPKLEQIGKELAELKEQEKSYKAKWQSEKTLVNKIQQN 470 >gi|71891762|dbj|BAA25442.3| KIAA0516 protein [Homo sapiens] Length = 1382 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 136 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 192 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 193 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 241 >gi|87118881|ref|ZP_01074780.1| glycyl-tRNA synthetase [Marinomonas sp. MED121] gi|86166515|gb|EAQ67781.1| glycyl-tRNA synthetase [Marinomonas sp. MED121] Length = 458 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ TN + S++LP + SFR+E + R +F + EL Sbjct: 147 TAQGIFTNFKNVVDSTSRALPFGIAQIGKSFRNEI----TPRNFIFRVREFEQMELEFFC 202 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + HE ++ ++ L + + DL + T D+ + + Sbjct: 203 KPGEDEKWHETWVALRKQWWLDQGLGEENIEFEYVTGDDLSHYSKSTVDILYKFP--HGF 260 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 261 EELEGVANRTDY 272 >gi|306820209|ref|ZP_07453852.1| protein of hypothetical function DUF1432 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551755|gb|EFM39703.1| protein of hypothetical function DUF1432 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 324 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 40/98 (40%), Gaps = 18/98 (18%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + ++ L+ + ILS+D I ++ ++ + Sbjct: 187 KEVLENPDKISKTVLEKGLDSGTAFEILSID------IADVDVGRNIGAQLQTDQAEADK 240 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 +I QA AE ++ +K +K ++ E + Sbjct: 241 KIAQAKAEERRAMAIAQEQEMKARVVEMKAKVVESESK 278 >gi|255730181|ref|XP_002550015.1| protein GCN20 [Candida tropicalis MYA-3404] gi|240131972|gb|EER31530.1| protein GCN20 [Candida tropicalis MYA-3404] Length = 751 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 56/199 (28%), Gaps = 10/199 (5%) Query: 18 LKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ-----AIAEGNLSLVD 71 + R + P + +L D + LI++ + I R G+ + + D Sbjct: 262 QEIRGDDTPALQSVLDADVWRKSLIQEEQKINERITEIEKLRGEFEEESLEVKKLDNERD 321 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK 131 L+ + E+L +E ++ E ++ S R Sbjct: 322 DLETHLQEISEKLYDMESDKAESRAAGILYGLGFTKETQNLPTKQFSGG----WRMRLSL 377 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 A+ + + E ++D T L+ + + L + Sbjct: 378 ARALFCQPDLLLLDEPSNMLDVPSITFLAKYLQTYKSTVLVVSHDRAFLNEVATDIIHQH 437 Query: 192 YTEVSAPLLVRDEAMYGTG 210 + ++ Y T Sbjct: 438 SERLDYYRGSNFDSFYATR 456 >gi|157363514|ref|YP_001470281.1| methyl-accepting chemotaxis sensory transducer [Thermotoga lettingae TMO] gi|157314118|gb|ABV33217.1| methyl-accepting chemotaxis sensory transducer [Thermotoga lettingae TMO] Length = 657 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 4/87 (4%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV 70 E + ++ I L E++R +++ D + S + + +A+G +V Sbjct: 496 IEAARAGEAGKGFAVVADEIRKLAEESRKATQEVADTLKKIKSQT----ELVAKGGQEVV 551 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSS 97 + L+N TLKE + +E V S Sbjct: 552 NQLQNSMITLKESVDQMESMVKSVESF 578 >gi|260942551|ref|XP_002615574.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238850864|gb|EEQ40328.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 453 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 55/171 (32%), Gaps = 19/171 (11%) Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 H + L FM + ++G+ EV PL+ + + +G + DDM Sbjct: 44 VTPGSIFFLPHGTRIFNKLVHFMKNQQL-KYGFQEVITPLIYKTKLWEVSGHWDNYKDDM 102 Query: 220 FCTT---------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSE 264 F L P + ++S LP+R + + R+E Sbjct: 103 FKVIGNDLTKEKDSEEAHLHEYGLKPMNCPGHCLIFSKFERSYNELPIRLSDFSSLHRNE 162 Query: 265 AGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 A A G+ R +F + + + E ++ ++ + Sbjct: 163 ASGALS---GLTRVRRFHQDDGHIFCEMDQIHQEITNTINLIKDTYNVFGI 210 >gi|154419429|ref|XP_001582731.1| hypothetical protein [Trichomonas vaginalis G3] gi|121916968|gb|EAY21745.1| hypothetical protein TVAG_237710 [Trichomonas vaginalis G3] Length = 1216 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 9/100 (9%) Query: 24 EPQSEYILSL--DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV-------DALK 74 + E I + DE + L K++ ++ N+ S + + S + L Sbjct: 422 DVDQEKIAEMSDDEMIKELKSKLDALQGLHNNISKNLEKIDPNNKDSDKLSNKELGEKLD 481 Query: 75 NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 +E LK ++ ++ S+ K PL+ + Sbjct: 482 SEIEKLKAEIAKGNDVNEKIQSTYKHAGGNKEESPLDMLK 521 >gi|121595260|ref|YP_987156.1| nuclease [Acidovorax sp. JS42] gi|120607340|gb|ABM43080.1| ParB domain protein nuclease [Acidovorax sp. JS42] Length = 683 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 37 NRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 R +IE ++A+ + + A+ + DAL+ E L EQL LE Sbjct: 322 KREAQ-RIEKLQAKLQEVAEAVDAAMDAEDEDKADALQEEGERLGEQLQALED 373 >gi|303320299|ref|XP_003070149.1| Heat shock protein 78, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109835|gb|EER28004.1| Heat shock protein 78, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|320034606|gb|EFW16550.1| heat shock protein 78 [Coccidioides posadasii str. Silveira] Length = 795 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 34/83 (40%), Gaps = 10/83 (12%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQ-IGQA--IAEGNLSLVDAL-------KNET 77 + I LD + + ++E +R + S + G+ + +G V L + + Sbjct: 338 DAIQKLDREIMTIQIELESLRKETDIASKERKGKLEELLKGKQEEVGKLNEVWEKERAQI 397 Query: 78 STLKEQLPILEKEEHEVCSSLKK 100 +K+ LE+ ++ + ++ Sbjct: 398 EEIKKTKEDLERARLDLEQAQRE 420 >gi|115530777|emb|CAL49375.1| novel protein similar to nfe2l1 (nuclear factor (erythroid-derived 2)-like 1) [Xenopus (Silurana) tropicalis] Length = 705 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 11/79 (13%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L + E + R S + Sbjct: 595 IRDIRRRGKNK-VAAQNCRKRKLDV----ILNLEDDVCQLQVRKEKLLKERAQCSKSMSH 649 Query: 61 AIAEGNL---SLVDALKNE 76 + N + L++E Sbjct: 650 MKQKLNDLYRDVFSKLRDE 668 >gi|114669382|ref|XP_001171223.1| PREDICTED: sperm associated antigen 9 isoform 7 [Pan troglodytes] Length = 1320 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|119184297|ref|XP_001243073.1| conserved hypothetical protein [Coccidioides immitis RS] Length = 795 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 34/83 (40%), Gaps = 10/83 (12%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQ-IGQA--IAEGNLSLVDAL-------KNET 77 + I LD + + ++E +R + S + G+ + +G V L + + Sbjct: 338 DAIQKLDREIMTIQIELESLRKETDIASKERKGKLEELLKGKQEEVGKLNEVWEKERAQI 397 Query: 78 STLKEQLPILEKEEHEVCSSLKK 100 +K+ LE+ ++ + ++ Sbjct: 398 EEIKKTKEDLERARLDLEQAQRE 420 >gi|73966444|ref|XP_866118.1| PREDICTED: similar to sperm associated antigen 9 isoform 1 isoform 12 [Canis familiaris] Length = 1320 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|224372380|ref|YP_002606752.1| TPR repeat protein [Nautilia profundicola AmH] gi|223589863|gb|ACM93599.1| TPR repeat protein [Nautilia profundicola AmH] Length = 297 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 44/97 (45%), Gaps = 5/97 (5%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ +++N + L ++ +E + I L K + I + +S I + Sbjct: 53 IEQLKKNLDEFKSKLAQKFVEYD-QTISDLSNK----LSSFNTILSEIDSTKLSIDKLKK 107 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + + + +KN TL++++ LE++ + ++++ Sbjct: 108 QLQDTNLTDIKNRIKTLEDKVAALEEQNQAIKKTIEE 144 >gi|149178521|ref|ZP_01857109.1| glycyl-tRNA synthetase [Planctomyces maris DSM 8797] gi|148842636|gb|EDL57011.1| glycyl-tRNA synthetase [Planctomyces maris DSM 8797] Length = 555 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 47/137 (34%), Gaps = 9/137 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + +P + SFR+E + R +F + E+ Sbjct: 234 TAQGMFVNFKNVVDSGRVKVPFGIAQIGKSFRNEI----TPRNYIFRSREFEQMEMEFFC 289 Query: 291 REEDSFTEHERMLSCAEEILKR---LDLHYRVVSLCTGDLGFSACKTYDLEVWLA--GQN 345 ++SF ++ + + + + +L + T D+E +N Sbjct: 290 HPDESFEWYQYWRDRRYAWYIKHGIAEDNLILRDHTQEELAHYSVGTADVEYAFPFMEEN 349 Query: 346 LYREISSCSTCGNFQSR 362 Y E+ + G+F R Sbjct: 350 EYGELEGIAHRGDFDLR 366 >gi|119614980|gb|EAW94574.1| sperm associated antigen 9, isoform CRA_f [Homo sapiens] Length = 1206 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|119614977|gb|EAW94571.1| sperm associated antigen 9, isoform CRA_c [Homo sapiens] Length = 1320 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|114669380|ref|XP_001171104.1| PREDICTED: sperm associated antigen 9 isoform 1 [Pan troglodytes] gi|114669384|ref|XP_001171141.1| PREDICTED: sperm associated antigen 9 isoform 2 [Pan troglodytes] Length = 1311 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|50420561|ref|XP_458817.1| DEHA2D08206p [Debaryomyces hansenii CBS767] gi|49654484|emb|CAG86963.1| DEHA2D08206p [Debaryomyces hansenii] Length = 474 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 70/235 (29%), Gaps = 32/235 (13%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 H + L FM + ++G+ EV PL+ + + +G + +DMF Sbjct: 58 TPGSIFFLPHGTRIFNKLVHFMKNQQL-KYGFQEVITPLIYKTKLWEMSGHWENYKEDMF 116 Query: 221 CTT----------------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA 258 L P + ++S LP+R++ + Sbjct: 117 KVVGNDLSKEEDISHEHNHDDSEGLHDYGLKPMNCPGHCLIFSKFERSYNELPIRYSDFS 176 Query: 259 PSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 R+EA A G+ R +F + + E ++ ++ K + Sbjct: 177 SLHRNEASGALS---GLTRVRRFHQDDGHIFCELYQIQDEITNTINLIKDTYKVFGIDSV 233 Query: 319 VVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS 373 + D+ W + S + + + R N R+ + Sbjct: 234 KDVEFFLSTRPTDKFMGDITTWNDAE------SQLTNVLDNTAGRGNWSIREGDG 282 >gi|73966424|ref|XP_865969.1| PREDICTED: similar to sperm associated antigen 9 isoform 1 isoform 3 [Canis familiaris] Length = 1306 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|73966446|ref|XP_852670.1| PREDICTED: similar to sperm associated antigen 9 isoform 1 isoform 2 [Canis familiaris] Length = 1320 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|73966440|ref|XP_537679.2| PREDICTED: similar to sperm associated antigen 9 isoform 1 isoform 1 [Canis familiaris] Length = 1311 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|315607744|ref|ZP_07882737.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315250213|gb|EFU30209.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 623 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 49/104 (47%), Gaps = 12/104 (11%) Query: 2 LDIQWIRQNPEHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 L+I R+ ++ LK R ++ +LD + L+++ E ++ N+ + Sbjct: 527 LNISVARRKLDNFKSNLKNVAERGVD-------ALDNERGRLMRRYEGLKQEINTYENNL 579 Query: 59 G--QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 G A ++ SL+D + + LK+ + +++++ + + K+ Sbjct: 580 GFLNASSKKGNSLIDEMNRKVQKLKDDMELVKQKIKAIDAENKE 623 >gi|302391399|ref|YP_003827219.1| band 7 protein [Acetohalobium arabaticum DSM 5501] gi|302203476|gb|ADL12154.1| band 7 protein [Acetohalobium arabaticum DSM 5501] Length = 327 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 16/93 (17%) Query: 9 QNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQIGQA 61 +NP+ + + ++ L+ + ILS+D KN + + A +I QA Sbjct: 192 ENPDSISKTVLEKGLDSGTAFEILSIDIADVDVGKNIGAQLQTDQAEAD-----KEIAQA 246 Query: 62 IAEGNLSLV----DALKNETSTLKEQLPILEKE 90 AE ++ +K E + ++ E E Sbjct: 247 KAEERRAMAVAQEQEMKAEVQEKRAKVVEAEAE 279 >gi|291541481|emb|CBL14591.1| glycyl-tRNA synthetase [Ruminococcus bromii L2-63] Length = 458 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 13/194 (6%) Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL 228 + ++ + + + + + M+ T Q + Sbjct: 113 NVAGWTNEEMMNYIKEKEIPCPNCGKHNFTDIRQFNLMFKTFQGVTED----SKNEIYLR 168 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 169 PETAQGIFVNFSNIQRTSRKKVPFGVAQIGKSFRNEI----TPGNFIFRVREFEQMELEF 224 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQN 345 + E + L L++ + L +L F + T D E Sbjct: 225 FCKPGTDLEWFEYWRGFCRDWLYSLNIKEENLRLRDHSKEELCFYSKATTDFEYLFPF-- 282 Query: 346 LYREISSCSTCGNF 359 + E+ + ++ Sbjct: 283 GWGELWGVADRTDY 296 >gi|149030409|gb|EDL85446.1| CTTNBP2 N-terminal like (predicted), isoform CRA_b [Rattus norvegicus] Length = 525 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 38/113 (33%), Gaps = 9/113 (7%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA------QIGQAIAEG 65 + + ALK LE + + +++ + L ++E+ R+R S+ + + A Sbjct: 26 DLVIEALK---LEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVLECKKATSKAAE 82 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 L + K + LE+E + + + E Sbjct: 83 EGQKAGELSLKLEKEKSRASKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQ 135 >gi|114669376|ref|XP_001171188.1| PREDICTED: sperm associated antigen 9 isoform 5 [Pan troglodytes] Length = 1334 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|3832516|gb|AAC70781.1| rabaptin-4 [Homo sapiens] Length = 829 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 REYAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|90424612|ref|YP_532982.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] gi|90106626|gb|ABD88663.1| threonyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] Length = 679 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 86/293 (29%), Gaps = 28/293 (9%) Query: 21 RHLEPQSEYILSLDEKNRILIKK-----IEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 R+ E ++++K R +I + + + + Q+ + E + Sbjct: 132 RNEPFTPEDFAAIEKKMREIIGRDKPFTKDVWDREK---TKQVFRDKGETFKVELVDAIP 188 Query: 76 ETSTLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 +K Q + +S K+ + + + +N +L R G + Sbjct: 189 GNDLIKIYYQGDWFDLCRGPHMTSTGKIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAFA 248 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS----- 188 + + E D + + G A G + + Sbjct: 249 KQEELDAYLKQIEEAEKRDHRKLGRELDLFHFQEEGPGVVFWHAKGWTIFQALIAYMRRR 308 Query: 189 -EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT---------DGRWLIPTSEVSLTN 238 Y EV+AP ++ +G + ++MF L P + Sbjct: 309 LSGDYDEVNAPQILDKALWEISGHWEWYRENMFAAQSAGDEAEDKRWFALKPMNCPGHVQ 368 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITR 291 ++ H + + LPLR R E A G++R F + + Sbjct: 369 IFKHGLKSYRDLPLRMAEFGIVHRYEPSGA---MHGLMRVRGFTQDDAHVFCT 418 >gi|150388509|ref|YP_001318558.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|166980095|sp|A6TL31|SYP_ALKMQ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|149948371|gb|ABR46899.1| prolyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 570 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 S+ +N+ + D N K ++ + GS G+ +GR + A++E Y + G + P L PY Sbjct: 421 SKGLNATFLDENGKE-QYFYM--GSYGIGIGRTMAAVIEQYHDEKG-IKWPLALAPY 473 >gi|297531631|ref|YP_003672906.1| glycyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|297254883|gb|ADI28329.1| glycyl-tRNA synthetase [Geobacillus sp. C56-T3] Length = 460 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 173 TAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + E +E L L + + R+ +L + T D+E + Sbjct: 229 KPGEELQWLEYWKQFCKEWLLSLGMKEDNIRLRDHAKEELSHYSNATTDIEYHFPF--GW 286 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ ++ +R Sbjct: 287 GELWGIASRTDYDLKR 302 >gi|261420842|ref|YP_003254524.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|319768511|ref|YP_004134012.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|261377299|gb|ACX80042.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|317113377|gb|ADU95869.1| glycyl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 460 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 173 TAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + E +E L L + + R+ +L + T D+E + Sbjct: 229 KPGEELQWLEYWKQFCKEWLLSLGMKEDNIRLRDHAKEELSHYSNATTDIEYHFPF--GW 286 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ ++ +R Sbjct: 287 GELWGIASRTDYDLKR 302 >gi|307214547|gb|EFN89532.1| Myosin heavy chain, non-muscle [Harpegnathos saltator] Length = 1830 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R L+ SE + L+ R L +++++ + + + + S + K++ Sbjct: 1347 TRELDELSEKVEELERGRRGLQSELDELVNNQGTADKNVHELEKAKRALESQLAEQKSQV 1406 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIP 106 L+++L E + + +++ L + Sbjct: 1407 EELEDELQFTEDAKLRLEVNMQALRAQFE 1435 >gi|288555735|ref|YP_003427670.1| hypothetical protein BpOF4_13635 [Bacillus pseudofirmus OF4] gi|288546895|gb|ADC50778.1| hypothetical protein BpOF4_13635 [Bacillus pseudofirmus OF4] Length = 334 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 18/101 (17%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + + L+ + ILS+D I I+ +++ + Sbjct: 193 KKVLENPDMISQTVLSKGLDAGTAFEILSID------IADIDIGKNIGAELQTDQAEADK 246 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKEEHE 93 +I QA AE ++ +K ++ ++ E E Sbjct: 247 KIAQAKAEERRAMAVAQEQEMKARVEEMRAKVVEAEAEVPM 287 >gi|297700782|ref|XP_002827413.1| PREDICTED: LOW QUALITY PROTEIN: c-Jun-amino-terminal kinase-interacting protein 4-like [Pongo abelii] Length = 1321 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|225620495|ref|YP_002721752.1| MATE efflux family protein [Brachyspira hyodysenteriae WA1] gi|225215314|gb|ACN84048.1| MATE efflux family protein [Brachyspira hyodysenteriae WA1] Length = 615 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 31/72 (43%) Query: 35 EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 + R+ +++++++R ++N + + + + +K E + +E L +E+ Sbjct: 535 AEWRMQLEEMKELREKKNQERKEYNENRKKEKEAKKLQMKQEVQSRREARHRLREEKKIE 594 Query: 95 CSSLKKLISCIP 106 ++ + Sbjct: 595 SQKRREERMNLR 606 >gi|198274780|ref|ZP_03207312.1| hypothetical protein BACPLE_00939 [Bacteroides plebeius DSM 17135] gi|198272227|gb|EDY96496.1| hypothetical protein BACPLE_00939 [Bacteroides plebeius DSM 17135] Length = 333 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 12/86 (13%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + ++ L+ + ILS+D +N +I+ A +N Sbjct: 192 KSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGRNIGASLQIDQANADKN----- 246 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQ 83 I QA AE ++ AL+ E E+ Sbjct: 247 IAQAKAEERRAMAVALEQEMKAKAEE 272 >gi|189460552|ref|ZP_03009337.1| hypothetical protein BACCOP_01193 [Bacteroides coprocola DSM 17136] gi|189432796|gb|EDV01781.1| hypothetical protein BACCOP_01193 [Bacteroides coprocola DSM 17136] Length = 333 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 12/86 (13%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + ++ L+ + ILS+D +N +I+ A +N Sbjct: 192 KSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGRNIGASLQIDQANADKN----- 246 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQ 83 I QA AE ++ AL+ E E+ Sbjct: 247 IAQAKAEERRAMAVALEQEMKAKAEE 272 >gi|24460121|gb|AAN61565.1|AF327452_1 JNK-associated leucine-zipper protein [Homo sapiens] Length = 1311 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|1050523|emb|CAA62580.1| rabaptin-5 [Homo sapiens] Length = 862 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R+ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 REYAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|114669386|ref|XP_001171158.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 4 isoform 3 [Pan troglodytes] gi|114669388|ref|XP_001171204.1| PREDICTED: sperm associated antigen 9 isoform 6 [Pan troglodytes] Length = 1307 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|327274258|ref|XP_003221895.1| PREDICTED: coiled-coil domain-containing protein 158-like [Anolis carolinensis] Length = 1052 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 71/248 (28%), Gaps = 5/248 (2%) Query: 19 KKRH-LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKN 75 KR +E I L+E K+ ++ RN S ++ A +D LK+ Sbjct: 707 AKRGQIEALQSKIKFLEEAMITATKEKHYLKEERNKLSQELTCMAASNIKMAEELDILKS 766 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 + LKE+L +E + + + E + ++ Sbjct: 767 QDKRLKEKLATMESALDKASMQFAECQCIMQQQEQEAMRFKLQHTLDVKELQGPGYALRS 826 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 +++ + +G + + + E L L E+ Sbjct: 827 LSAKQRHSTLPHSHPSSTPTSQGFAGHISLIDSHSVLAKENPLRDLKQVLQELRSTVEEM 886 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLP--LR 253 + L R E+ I + ++ ++ + SK L R Sbjct: 887 PSANLPRRESDSDADSITEETLQTESALAEEYMNSSAATQTIFSSTPRYTSSKKLSPEER 946 Query: 254 FTTLAPSF 261 +P + Sbjct: 947 CKARSPVY 954 >gi|327269052|ref|XP_003219309.1| PREDICTED: centromere protein J-like [Anolis carolinensis] Length = 1337 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 3/98 (3%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA--QIGQAIAE 64 +R+ E+ + L+K + + + + L + +++ ++ R Q +AI + Sbjct: 906 LREERENAMVNLRKEIADFEQQKVKELAQIEDFKKEEVRKLQKERKVFEKYAQAARAIPD 965 Query: 65 GNL-SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 + ALK + +TL+ L E + L+ Sbjct: 966 KKERDEIQALKQQMATLQGDLKRREAKWSTTHMRLRDQ 1003 >gi|114669378|ref|XP_001171175.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 4 isoform 4 [Pan troglodytes] Length = 1321 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|27436920|ref|NP_003962.3| C-Jun-amino-terminal kinase-interacting protein 4 isoform 3 [Homo sapiens] gi|61611997|gb|AAX47276.1| sperm associated antigen 9 transcript variant 1 [Homo sapiens] gi|119614976|gb|EAW94570.1| sperm associated antigen 9, isoform CRA_b [Homo sapiens] Length = 1307 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|301612738|ref|XP_002935873.1| PREDICTED: hypothetical protein LOC100493055 [Xenopus (Silurana) tropicalis] Length = 1225 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 16/98 (16%) Query: 6 WIRQNPEHLDIALKKRHLEPQSEYILSLDE----KNRILIKKIEDIRARRNSNSAQIGQA 61 ++RQ EH + ++E + ++E + + L K+ ED+ ++ + + I Sbjct: 725 FLRQQIEHFEK--------VKAEELKKMEEFKREEMKKLQKEKEDLE-KQAALAKSI--- 772 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + LK + S L+ + E + LK Sbjct: 773 KESEQNEEIQMLKLQISELQGEFHRHESRWSTTENQLK 810 >gi|241017244|gb|ACS66686.1| stathmin [Octopus vulgaris] Length = 282 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 47/140 (33%), Gaps = 3/140 (2%) Query: 12 EHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 E + LKK R +++ + L ++ + ++ + N+ S + + Sbjct: 78 EAIADKLKKAQERRESLETQRLEQLQKERERAQQVLQKAQEENNTFSKSTKEKLRRSLEL 137 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 + + + L+++L K+ + C + + + + ++ + + Sbjct: 138 NKENREAQIKALQDRLREHRKKVSDACKNSEMVSKDLEEKINQKFEKYDQNRRAQMQLLL 197 Query: 129 GKKPSAIHLSREHFEIGEAL 148 + +E E + Sbjct: 198 DRLREHDKHIKEVNNACETM 217 >gi|319653141|ref|ZP_08007243.1| hypothetical protein HMPREF1013_03858 [Bacillus sp. 2_A_57_CT2] gi|317395062|gb|EFV75798.1| hypothetical protein HMPREF1013_03858 [Bacillus sp. 2_A_57_CT2] Length = 816 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 56/177 (31%), Gaps = 11/177 (6%) Query: 2 LD--IQWIRQNPEH--LDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I IR + + L + EPQ+E I+SL + R+ I +RA + Sbjct: 388 LDEVITTIRASKDKRDAKDNLIAKFEFTEPQAEAIVSL-QLYRLTNTDITALRAEAEDLA 446 Query: 56 AQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE-- 111 IG+ + E L +K E +K++ + E K+ + + Sbjct: 447 KLIGELKSILESEKKLFSVIKKELRDVKKRFADERRTRIEAEIEEIKINLEVLVASEDVI 506 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLT 168 + RS ++ + L + D + + Sbjct: 507 VTVTKEGYVKRTSQRSFAASNGQDFGMKDSDRLIAKLDMNTTDVLLVFTNKGNYLYC 563 >gi|284007219|emb|CBA72507.1| conserved hypothetical phage protein [Arsenophonus nasoniae] Length = 495 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 + LD + + IE+ + + +I + + ++LK E + LK +L + Sbjct: 233 IRLDAAKKD--EHIEEDKTKHKEIMKEIKEVKGRSDADENESLKKEIAELKSRLDKKDNR 290 Query: 91 EHEVCSSLKK 100 + E + K+ Sbjct: 291 KDENDAEKKE 300 >gi|261402423|ref|YP_003246647.1| CobB/CobQ domain protein glutamine amidotransferase [Methanocaldococcus vulcanius M7] gi|261369416|gb|ACX72165.1| CobB/CobQ domain protein glutamine amidotransferase [Methanocaldococcus vulcanius M7] Length = 493 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 65/211 (30%), Gaps = 18/211 (8%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ--IG 59 LD +++R N +HL+ + + EKNR + K++ IR+ +N +++ I Sbjct: 184 LDNKFVRDNF--------LKHLKISDDEKEKIFEKNRKIKKEL-KIRSLKNQLTSEINIS 234 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + I ++ KN+ + +K + + L + + Sbjct: 235 KNINNTKNRNLERGKNKLNNMKGIVLLSTSSNSGKTFLTTALSAKLKGKI-----FVAKI 289 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDR--ATKLSGARFSVLTGHLAHLERA 177 ++ +++ + G +D + V+ + A Sbjct: 290 GGDVRDIVPSLYLLREKMTKYNSIKIGNRGWVDVEEFLNHVKRENYNYVIIEGVMGAFTA 349 Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 + M + V M G Sbjct: 350 SFKNMSSYQIVKKLGFPVYIVSACNLSGMEG 380 >gi|222475691|ref|YP_002564212.1| hypothetical protein Hlac_2755 [Halorubrum lacusprofundi ATCC 49239] gi|222454062|gb|ACM58326.1| hypothetical protein Hlac_2755 [Halorubrum lacusprofundi ATCC 49239] Length = 388 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 14/102 (13%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKK-IEDIRARRNSNSAQIGQAI 62 ++ I+ + + R + + E+ R L ++ I+++ R+ S++I + Sbjct: 203 MRSIQNEIDEV-HNEASRAADAEV-------EEYRQLQQQRIQELEEERSKLSSKIDELS 254 Query: 63 ----AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 V+ALK K + ++ E + + Sbjct: 255 ETINGSDQDDRVEALKKR-KEAKAEYEEVDAELSTLQEQRDQ 295 >gi|270013372|gb|EFA09820.1| hypothetical protein TcasGA2_TC011966 [Tribolium castaneum] Length = 4544 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 47/120 (39%), Gaps = 10/120 (8%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYIL------SLDEKN---RILIKKIEDIRARRNSN 54 I+ +R E + L + + + + + +L++ + I ++E+ + N Sbjct: 295 IKSLRDELETVRKELGHKTDDLERQRVNLHEVEANLEQARGELKEKITEVENTKKECNLQ 354 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 +Q Q I++ N ++ + E L ++L ++ + + + + ++ Sbjct: 355 VSQKDQQISDANKTIAER-SEEIKKLAKELEDVKHTFEDSKNEIHSRHARQVASQDSQLM 413 >gi|313674406|ref|YP_004052402.1| hypothetical protein Ftrac_0285 [Marivirga tractuosa DSM 4126] gi|312941104|gb|ADR20294.1| hypothetical protein Ftrac_0285 [Marivirga tractuosa DSM 4126] Length = 310 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 25/102 (24%) Query: 4 IQWIRQNPEHLDIALKKRH--------------------LEPQSEYILSLDEKNRILIKK 43 +Q IR+N E LKK + L Q E I L+E N+ L+ + Sbjct: 87 LQLIRKNLESEKEELKKSNNWAANQIQQYKDKVSGYEELLVLQDEKIKKLEEINKELLSE 146 Query: 44 IEDIRARRNSNSAQIGQAIA-----EGNLSLVDALKNETSTL 80 D++ +N + I + E + + LK E + Sbjct: 147 NTDLKTEKNVLNDSISKLRNNRQELESKVEIASRLKAENIKI 188 >gi|301607699|ref|XP_002933432.1| PREDICTED: nuclear factor erythroid 2-related factor 3 [Xenopus (Silurana) tropicalis] Length = 710 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 11/79 (13%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L + E + R S + Sbjct: 595 IRDIRRRGKNK-VAAQNCRKRKLDV----ILNLEDDVCQLQVRKEKLLKERAQCSKSMSH 649 Query: 61 AIAEGNL---SLVDALKNE 76 + N + L++E Sbjct: 650 MKQKLNDLYRDVFSKLRDE 668 >gi|261402663|ref|YP_003246887.1| chromosome segregation protein SMC [Methanocaldococcus vulcanius M7] gi|261369656|gb|ACX72405.1| chromosome segregation protein SMC [Methanocaldococcus vulcanius M7] Length = 1172 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 54/154 (35%), Gaps = 7/154 (4%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 I+ N + L+ KK+ ++ + L EK + +IE + + +I + Sbjct: 869 IKNNLKILNE--KKKKYNELAKNLKELTEKKEKIENEIETLEHEKKKLLQKI-----KEI 921 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + ++ L E + + +L E++ + K + E+ IG +E + Sbjct: 922 ENEINELNVEKAKYESKLEEEERKLYLCEKVEIKDGLEEKTIEELEIYIGELESEIKKLE 981 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLS 160 + + + E +++R Sbjct: 982 PINMRAIEDYKYVEERYKELIEKRKEYERDENKC 1015 >gi|296121907|ref|YP_003629685.1| glycyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] gi|296014247|gb|ADG67486.1| glycyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] Length = 551 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 9/137 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + +P + SFR+E R +F + E+ Sbjct: 231 TAQGMFVNFKNVCDSSRVKIPFGIAQIGKSFRNEI----TPRNFTFRSREFEQMEMEFFC 286 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAG--QN 345 +DS + + L + + L +L + T D+E Sbjct: 287 HPKDSLAWYTYWRDRRYKWYTDLGISSDNLILREHTHEELAHYSVGTADVEYAFPFLPAG 346 Query: 346 LYREISSCSTCGNFQSR 362 Y E+ + G+F R Sbjct: 347 EYGELEGVAHRGDFDLR 363 >gi|221131696|ref|XP_002161743.1| PREDICTED: similar to GE20182, partial [Hydra magnipapillata] Length = 1001 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 13/122 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI------ 62 +NP+ K++ S+ ++SL KNR E R + + I + Sbjct: 55 ENPDRKKKIFKRKG----SQKVISLKAKNRESHNADEKRRKEK--LNKLIVKLKDLLGLD 108 Query: 63 -AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + +++++ S K++ + E + I L + +N Sbjct: 109 GKKSKVAILEKAVEFVSKEKKEAKNYDMEYVNQKIKSLESIIVSLIDLLSCNSVSLPSNI 168 Query: 122 NI 123 + Sbjct: 169 QV 170 >gi|194578923|ref|NP_001124000.1| C-Jun-amino-terminal kinase-interacting protein 4 isoform 1 [Homo sapiens] gi|94717648|sp|O60271|JIP4_HUMAN RecName: Full=C-Jun-amino-terminal kinase-interacting protein 4; Short=JIP-4; Short=JNK-interacting protein 4; AltName: Full=Cancer/testis antigen 89; Short=CT89; AltName: Full=Human lung cancer oncogene 6 protein; Short=HLC-6; AltName: Full=JNK-associated leucine-zipper protein; Short=JLP; AltName: Full=Mitogen-activated protein kinase 8-interacting protein 4; AltName: Full=Proliferation-inducing protein 6; AltName: Full=Protein highly expressed in testis; Short=PHET; AltName: Full=Sperm surface protein; AltName: Full=Sperm-associated antigen 9; AltName: Full=Sperm-specific protein; AltName: Full=Sunday driver 1 gi|148922176|gb|AAI46756.1| SPAG9 protein [Homo sapiens] gi|158253415|gb|AAI53879.1| SPAG9 protein [Homo sapiens] gi|194380452|dbj|BAG63993.1| unnamed protein product [Homo sapiens] Length = 1321 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|86158749|ref|YP_465534.1| HsdR family type I site-specific deoxyribonuclease [Anaeromyxobacter dehalogenans 2CP-C] gi|85775260|gb|ABC82097.1| type I site-specific deoxyribonuclease, HsdR family [Anaeromyxobacter dehalogenans 2CP-C] Length = 1046 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 18/93 (19%) Query: 12 EHLDIALKKRHLEPQ---------SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 E + K R+L+ + E ++ +E L ++ E + N S QI Q Sbjct: 869 ERFRQS-KTRNLDLERLKAAIAAQLERLIDENETRVDLRERFESLIEEYNIGSKQIEQLF 927 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 L + + L E+ +E+ Sbjct: 928 --------QELLDLSQKLSEEEKRHIREQLSEE 952 >gi|15674109|ref|NP_268284.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|81856528|sp|Q9CDT4|SYP_LACLA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|12725184|gb|AAK06225.1|AE006441_3 prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] Length = 616 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 9/147 (6%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E ++T+L EI K Sbjct: 68 ELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNSDFILGPTHEETMTSLVRDEITSYKK 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI-TREEDSFTEHERMLSCAEE 308 LPL +AP FR E R G+LR +F + S ++ + E+ Sbjct: 128 LPLNVYQIAPKFRDEK----RPRYGLLRGREFLMKDGYSYHADQDSLDETYNDYKKAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY 335 I +R L+++ + G +G + + Sbjct: 184 IFERAGLNFKPIIADAGAMGGKDSQEF 210 >gi|327441016|dbj|BAK17381.1| prolyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 568 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVT 408 E+ G S ++N+ + D K+ + + G+ V R L A+ E++ + +G V Sbjct: 407 EVGHIFKLGTTYSEKLNATFLDEQGKAKPYI--MGCYGIGVSRILAAVAEHFQDENGFVW 464 Query: 409 IPTVLRPY 416 P L PY Sbjct: 465 -PAQLAPY 471 >gi|281492788|ref|YP_003354768.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|281376440|gb|ADA65926.1| Prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] Length = 616 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 9/147 (6%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E ++T+L EI K Sbjct: 68 ELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNSDFILGPTHEETMTSLVRDEITSYKK 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI-TREEDSFTEHERMLSCAEE 308 LPL +AP FR E R G+LR +F + S ++ + E+ Sbjct: 128 LPLNVYQIAPKFRDEK----RPRYGLLRGREFLMKDGYSYHADQDSLDETYNDYKKAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY 335 I +R L+++ + G +G + + Sbjct: 184 IFERAGLNFKPIIADAGAMGGKDSQEF 210 >gi|149040859|gb|EDL94816.1| CDC42 binding protein kinase alpha, isoform CRA_a [Rattus norvegicus] Length = 1732 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 43/116 (37%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L + +R L+ I + +++ + L ++ E+ Sbjct: 487 LEIKSLKEEIEKLRKQVAEVNHLEQQLEEANSVRRELDDAFRQIKAFEKQIKTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|109081266|ref|XP_001093485.1| PREDICTED: GRINL1A complex locus protein 1 isoform 3 [Macaca mulatta] Length = 438 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 41/131 (31%), Gaps = 2/131 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIECMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQMV 371 Query: 150 LMDFDRATKLS 160 + + ++L Sbjct: 372 EENNELQSRLD 382 >gi|16758474|ref|NP_446109.1| serine/threonine-protein kinase MRCK alpha [Rattus norvegicus] gi|81174934|sp|O54874|MRCKA_RAT RecName: Full=Serine/threonine-protein kinase MRCK alpha; AltName: Full=CDC42-binding protein kinase alpha; AltName: Full=Myotonic dystrophy kinase-related CDC42-binding kinase alpha; Short=MRCK alpha; Short=Myotonic dystrophy protein kinase-like alpha gi|2736151|gb|AAC02941.1| mytonic dystrophy kinase-related Cdc42-binding kinase [Rattus norvegicus] Length = 1732 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 43/116 (37%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L + +R L+ I + +++ + L ++ E+ Sbjct: 487 LEIKSLKEEIEKLRKQVAEVNHLEQQLEEANSVRRELDDAFRQIKAFEKQIKTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|326407711|gb|ADZ64782.1| prolyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 616 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 9/147 (6%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E ++T+L EI K Sbjct: 68 ELLAPSLLTADLWRESGRYDTYGEDLYKLKNRDNSDFILGPTHEETMTSLVRDEITSYKK 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI-TREEDSFTEHERMLSCAEE 308 LPL +AP FR E R G+LR +F + S ++ + E+ Sbjct: 128 LPLNVYQIAPKFRDEK----RPRYGLLRGREFLMKDGYSYHADQDSLDETYNDYKKAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY 335 I +R L+++ + G +G + + Sbjct: 184 IFERAGLNFKPIIADAGAMGGKDSQEF 210 >gi|313609056|gb|EFR84776.1| DNA topoisomerase IV, A subunit [Listeria monocytogenes FSL F2-208] Length = 586 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIRQNPEHLDIALKKR-HLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR + + D L + + + Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTNYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 448 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 479 >gi|188996836|ref|YP_001931087.1| putative protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931903|gb|ACD66533.1| putative protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 451 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 51/161 (31%), Gaps = 17/161 (10%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I L+++ ++L ++++ ++ + S ++ +++K E LK ++ + Sbjct: 22 DKIKILEDQIKLLQEEVQKLKQEQASV-KEV--------KEENESIKEELRKLKIEIAMP 72 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 E E + G S I V + + + Sbjct: 73 ELEVKSYYGMGPAASKAM------FNQKGVSIGGYGEIHFVHNPDKKPKNTIDAKRLILY 126 Query: 148 LGLMDFDRA--TKLSGARFSVLTGHLAHLERALGQFMIDLH 186 G ++ + + G E A+ ID + Sbjct: 127 FGYAFNEKLKFNSEIEWEHAFVEGKEESGETAVEFAFIDYN 167 >gi|118359788|ref|XP_001013132.1| hypothetical protein TTHERM_00295000 [Tetrahymena thermophila] gi|89294899|gb|EAR92887.1| hypothetical protein TTHERM_00295000 [Tetrahymena thermophila SB210] Length = 1462 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 38/102 (37%), Gaps = 5/102 (4%) Query: 26 QSEYILSLD--EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 + ++ D E+ + L + E + + I +A L++ L+ E +KEQ Sbjct: 1137 NIDDLIDKDLKEEIKKLTQNSEAAQH-QKLLQKAIDEAK--EKDILIEKLQKENKEMKEQ 1193 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 L + + +++LI + E + I + Sbjct: 1194 LQTQNSSIEKYQNQIQQLIDTLQKSEEERIQIVNEIKQVTPQ 1235 >gi|255030685|ref|ZP_05302636.1| DNA topoisomerase IV subunit A [Listeria monocytogenes LO28] Length = 278 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIR--QNPEHLDIALKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR ++ + L+ + E Q+E I+SL + R+ I ++++ S + Sbjct: 57 LDEVIKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 115 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 116 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 147 >gi|89098733|ref|ZP_01171614.1| hypothetical protein B14911_04719 [Bacillus sp. NRRL B-14911] gi|89086409|gb|EAR65529.1| hypothetical protein B14911_04719 [Bacillus sp. NRRL B-14911] Length = 459 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 27/82 (32%), Gaps = 9/82 (10%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQA---------IAEGNLSLVDALKNETSTLKEQL 84 D K +I ++ ++ S +I + + + A K E LK ++ Sbjct: 61 DSKINSADSEINRLQGEQDQVSKEIERLSLSISDTETKIKEKTEQIAATKEEIEKLKAEI 120 Query: 85 PILEKEEHEVCSSLKKLISCIP 106 ++ ++ LK Sbjct: 121 VVITDRINKRNEMLKDRARSFQ 142 >gi|296202449|ref|XP_002748464.1| PREDICTED: C-Jun-amino-terminal kinase-interacting protein 4 isoform 2 [Callithrix jacchus] Length = 1288 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 56 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 112 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 113 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 161 >gi|296202447|ref|XP_002748463.1| PREDICTED: C-Jun-amino-terminal kinase-interacting protein 4 isoform 1 [Callithrix jacchus] Length = 1302 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 56 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 112 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 113 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 161 >gi|290559281|gb|EFD92618.1| SMCs flexible hinge domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 813 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 41/84 (48%), Gaps = 14/84 (16%) Query: 9 QNPEHLDIAL---------KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 ++ E + A+ K+ L +S+ +++L ++ L+ ++ ++ ++ S Sbjct: 724 EDVEKVKDAIDDSREKYEKAKKELSSKSDKLIALRKRRTELMGQLSSLQKEKDEIS---- 779 Query: 60 QAIAEGNLSLVDALKNETSTLKEQ 83 + ++ ++ ++ LK + + LK + Sbjct: 780 -SKSQKVVTELNNLKVKEAELKVK 802 >gi|19075487|ref|NP_587987.1| conserved fungal protein [Schizosaccharomyces pombe 972h-] gi|74626332|sp|Q9Y7U0|YCJE_SCHPO RecName: Full=Uncharacterized protein C63.14 gi|4539607|emb|CAB40018.1| conserved fungal protein [Schizosaccharomyces pombe] Length = 1184 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 27/278 (9%), Positives = 64/278 (23%), Gaps = 35/278 (12%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV 70 PE L+ + +R+++P + R ++ R + + + Sbjct: 687 PEELEE-IARRNVDPMVSELSE-----RAAQER------ERKEQAKEAKRLKKLAKEEKR 734 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 K E + E+ + ++ ++ + + Sbjct: 735 LKKKEEKARKAEEKRLQKERAKYAKQMSRESAHADQAIANTGPVAPPYFEHETEPSHYEE 794 Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 + R + + + L + F H ++ Sbjct: 795 EEEEEPEERREESSHFSESSGNNEFEETEQEYTHGYGNDVLVQRTDVVNNFGESSHAHDN 854 Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSL 250 V ++ G + V L+ + + Sbjct: 855 A---------VNEKRDLGRNGFGDVDEQDATEVYRH--SIERIVPGDYLHDEKTRD---- 899 Query: 251 PLRFTTLAPSFRSE------AGSAGRDTRGMLRQHQFW 282 T +P+FRSE A R H + Sbjct: 900 --TLTRESPAFRSEEAVVEVADEDHPHASEAERAHSYS 935 >gi|312112686|ref|YP_003991002.1| glycyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|311217787|gb|ADP76391.1| glycyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 460 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 173 TAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + ++ L L + + L +L + T D+E + Sbjct: 229 KPGEELKWFDYWKQFCKQWLLSLGMKEENIRLRDHTKEELSHYSNATTDIEYKFPF--GW 286 Query: 348 REISSCSTCGNF 359 E+ ++ ++ Sbjct: 287 GELWGIASRTDY 298 >gi|116205157|ref|XP_001228389.1| hypothetical protein CHGG_10462 [Chaetomium globosum CBS 148.51] gi|88176590|gb|EAQ84058.1| hypothetical protein CHGG_10462 [Chaetomium globosum CBS 148.51] Length = 939 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 12/81 (14%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR----ARR--NSNSAQI-- 58 IR+N +D K + + + E I++ E +R ARR N + ++ Sbjct: 796 IRENAAAVDPNTAKEGVLGEVRALQPNHENRLEAIERAEKLRQKELARRRENPLTKELAT 855 Query: 59 ----GQAIAEGNLSLVDALKN 75 G+ G + V+ + Sbjct: 856 FVEEGKLKKSGGVEEVERARK 876 >gi|229087427|ref|ZP_04219561.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228695849|gb|EEL48700.1| Glycyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 455 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 169 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 224 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + + L L ++ + L +L + T D+E + Sbjct: 225 KPGEDLEWFTFWRNTCKNWLLALGMNEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 282 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 283 GELWGVASRTDFDLKR 298 >gi|312836802|ref|NP_001101760.2| C-Jun-amino-terminal kinase-interacting protein 4 [Rattus norvegicus] Length = 1320 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|254952729|gb|ACT97165.1| heat shock protein [Vitis labrusca x Vitis vinifera] Length = 911 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 2/91 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 393 IDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKARLVEVRRELDD 452 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 L D L+ K++ +++ + Sbjct: 453 LRDKLQPLMMKYKKEKERIDELRRLKQKREE 483 >gi|225457237|ref|XP_002284179.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 911 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 2/91 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 393 IDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKARLVEVRRELDD 452 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 L D L+ K++ +++ + Sbjct: 453 LRDKLQPLMMKYKKEKERIDELRRLKQKREE 483 >gi|147811710|emb|CAN72669.1| hypothetical protein VITISV_012280 [Vitis vinifera] Length = 906 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 2/91 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 388 IDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKARLVEVRRELDD 447 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 L D L+ K++ +++ + Sbjct: 448 LRDKLQPLMMKYKKEKERIDELRRLKQKREE 478 >gi|118102469|ref|XP_417997.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 644 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 6/102 (5%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA------QIGQAIAEGNLSLVDALKNE 76 LE + + +++ + L ++E+ RAR S+ + A A L + Sbjct: 152 LEFEKSQVKKFEKEQKKLSSQLEEERARHKQLSSMLVVECKKATAKAAEESQKTAELSLK 211 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 K ++ LE+E ++ + + E Sbjct: 212 LEKEKSKVSKLEEELASKRKRGLQMEAQVEKQLSEFDIEREQ 253 >gi|59805048|gb|AAX08108.1| heat shock protein 101 [Vitis vinifera] Length = 911 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 2/91 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 393 IDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKARLVEVRRELDD 452 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 L D L+ K++ +++ + Sbjct: 453 LRDKLQPLMMKYKKEKERIDELRRLKQKREE 483 >gi|150006137|ref|YP_001300881.1| hypothetical protein BVU_3648 [Bacteroides vulgatus ATCC 8482] gi|212692019|ref|ZP_03300147.1| hypothetical protein BACDOR_01514 [Bacteroides dorei DSM 17855] gi|237708962|ref|ZP_04539443.1| UPF0365 protein [Bacteroides sp. 9_1_42FAA] gi|237724696|ref|ZP_04555177.1| conserved hypothetical protein [Bacteroides sp. D4] gi|254883525|ref|ZP_05256235.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|265756271|ref|ZP_06090600.1| UPF0365 protein [Bacteroides sp. 3_1_33FAA] gi|294775316|ref|ZP_06740839.1| SPFH/Band 7/PHB domain protein [Bacteroides vulgatus PC510] gi|319641687|ref|ZP_07996370.1| hypothetical protein HMPREF9011_01968 [Bacteroides sp. 3_1_40A] gi|166990881|sp|A6L6E5|Y3648_BACV8 RecName: Full=UPF0365 protein BVU_3648 gi|149934561|gb|ABR41259.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|212665411|gb|EEB25983.1| hypothetical protein BACDOR_01514 [Bacteroides dorei DSM 17855] gi|229436891|gb|EEO46968.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229457024|gb|EEO62745.1| UPF0365 protein [Bacteroides sp. 9_1_42FAA] gi|254836318|gb|EET16627.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|263233862|gb|EEZ19471.1| UPF0365 protein [Bacteroides sp. 3_1_33FAA] gi|294450893|gb|EFG19370.1| SPFH/Band 7/PHB domain protein [Bacteroides vulgatus PC510] gi|317386661|gb|EFV67557.1| hypothetical protein HMPREF9011_01968 [Bacteroides sp. 3_1_40A] Length = 332 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 12/86 (13%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + ++ L+ + ILS+D +N +I+ A +N Sbjct: 192 KSVLENPDSISKLVLRKGLDAGTAFEILSIDIADIDIGRNIGAALQIDQANADKN----- 246 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQ 83 I QA AE ++ AL+ E E+ Sbjct: 247 IAQAKAEERRAMAVALEQEMKAKAEE 272 >gi|326798104|ref|YP_004315923.1| protein translocase subunit secA [Sphingobacterium sp. 21] gi|326548868|gb|ADZ77253.1| Protein translocase subunit secA [Sphingobacterium sp. 21] Length = 1119 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 18/159 (11%), Positives = 53/159 (33%), Gaps = 17/159 (10%) Query: 3 DIQWIRQNPEHLDIALKK---------RHLEPQ-----SEYILSLDEKNRILIKKIEDIR 48 DI+ IR + + K R S+Y+ +D + L E+ + Sbjct: 35 DIKHIRPLVDKIKEEFAKLEGLSHDELRAKTLDFKRRISDYLADIDGEINQLKTDAEEPQ 94 Query: 49 ---ARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 A +N+ ++ + I + + L + L + + E + Sbjct: 95 VEMAEKNAIYDKVDKLIKDRDKKLEEVLMEILPEAFAVVKETARRFTENTTLEVTASEFD 154 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 ++ ++ + ++ + + + + + H+++ Sbjct: 155 RDLAAKKPNVEIKGDKAVWHNTWIAAGNQVTWNMVHYDV 193 >gi|295400623|ref|ZP_06810600.1| glycyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|294977204|gb|EFG52805.1| glycyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93] Length = 460 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 173 TAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + ++ L L + + L +L + T D+E + Sbjct: 229 KPGEELKWFDYWKQFCKQWLLSLGMKEENIRLRDHTKEELSHYSNATTDIEYKFPF--GW 286 Query: 348 REISSCSTCGNF 359 E+ ++ ++ Sbjct: 287 GELWGIASRTDY 298 >gi|291546836|emb|CBL19944.1| glycyl-tRNA synthetase, dimeric type [Ruminococcus sp. SR1/5] Length = 464 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 55/234 (23%), Gaps = 24/234 (10%) Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 R I + D + + + E T Sbjct: 88 MDCKECHERFRADKLIEDFCAEHDIAIEGSVDAWSQEKMMDFIKEHEVGCPSCGKHNFTD 147 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESK 248 + + E T + T++ N + + K Sbjct: 148 IRQFNLMFKTFQGVTEDAKNTVYLRPE---------------TAQGIFVNFKNVQRTSRK 192 Query: 249 SLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEE 308 +P + SFR+E R +F + EL + + Sbjct: 193 KIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCEPDTDLEWFAYWKKFCLD 248 Query: 309 ILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 L L L V D L F + T D+E + E+ + ++ Sbjct: 249 WLSALGLKDDEVRYRDHDKEELSFYSKATTDVEFLFPF--GWGELWGIADRTDY 300 >gi|296805489|ref|XP_002843569.1| DUF1720 domain-containing protein [Arthroderma otae CBS 113480] gi|238844871|gb|EEQ34533.1| DUF1720 domain-containing protein [Arthroderma otae CBS 113480] Length = 1455 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 7/120 (5%) Query: 24 EPQSEYILSL--DEKNR---ILIKKIEDIRARRNSNSAQI--GQAIAEGNLSLVDALKNE 76 E ++E + +L DE R L ++ E +AR + Q+ G+ + + E Sbjct: 1038 EAETEQLDTLSRDETRRQEEELAREKEAAQARLKALEEQVRQGKIKKQEQKRRKQQAEQE 1097 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 + +L E ++L + ++ EE E I + S + Sbjct: 1098 AREKEAKLAAQRAELEAAQERERELQRQLESLGDEESSSDDDGPEFITPQDTTPTQSQVF 1157 >gi|194225697|ref|XP_001501659.2| PREDICTED: similar to Centriolin (110 kDa centrosomal protein) (Centrosomal protein 1) [Equus caballus] Length = 2406 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 5/90 (5%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA---RRNSNSAQIGQAIAEGNLSLVD 71 L++R E ++ D++ R+L ED+ + +I + +A S Sbjct: 1547 AEELERRAQETAVN-LVKADQQLRLLQADAEDLEQQKIEQEEILKEINKIVAA-KDSDFQ 1604 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 +L + L E+L L+ + + Sbjct: 1605 SLNKKKEKLTEELQKLQNDIETAERNEDHH 1634 >gi|270296241|ref|ZP_06202441.1| ATP-dependent chaperone ClpB [Bacteroides sp. D20] gi|270273645|gb|EFA19507.1| ATP-dependent chaperone ClpB [Bacteroides sp. D20] Length = 864 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 12/105 (11%) Query: 12 EHLDIA--LKKRHLE--PQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA----- 61 + + A L R++ + + L DE L +++ + + S +I Q Sbjct: 366 DAIIAAVELSNRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIERE 425 Query: 62 --IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 E + ++ + E + LKEQ + + + + K+ Sbjct: 426 AIKRENDKPKLEQIGKELAELKEQENSYKAKWQSEKTLVNKIQQN 470 >gi|312836823|ref|NP_001186133.1| C-Jun-amino-terminal kinase-interacting protein 4 isoform 6 [Mus musculus] gi|218937684|gb|ACL13004.1| JNK-interacting leucine zipper protein long form [Mus musculus] Length = 1320 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|242017506|ref|XP_002429229.1| moesin/ezrin/radixin, putative [Pediculus humanus corporis] gi|212514118|gb|EEB16491.1| moesin/ezrin/radixin, putative [Pediculus humanus corporis] Length = 565 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 40/109 (36%), Gaps = 11/109 (10%) Query: 9 QNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSN---------SAQ 57 + + + L K+ + E I L E+ + + +++ AR+N S Sbjct: 338 ERFKIVTEDLAKKKQDLHEAQESITRLVEQLKEVQVAKDELEARQNELQMMIIRLEESKN 397 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + A + + A + E +K ++ I +E + +++ Sbjct: 398 MEAAERQKLEDEISAKQEELLRVKSEVDIKAEETKRLQMEVEEARQKEK 446 >gi|189526704|ref|XP_001342673.2| PREDICTED: dynactin subunit 1 [Danio rerio] Length = 1226 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 37/109 (33%), Gaps = 6/109 (5%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIE---DIRARRNSNSAQIGQ 60 ++ + ++ E LK + E + L++ L + E ++ ++N Q+ + Sbjct: 176 LRALVKDLEEKLETLKMKRTE-DKAKLKELEKHKIQLEQLQEWKSKMQEQQNELQKQLKE 234 Query: 61 AIAEGNL--SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 A E + E + + + + ++ + L Sbjct: 235 AKREAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQLEADA 283 >gi|297733886|emb|CBI15133.3| unnamed protein product [Vitis vinifera] Length = 881 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 2/91 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 363 IDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKARLVEVRRELDD 422 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 L D L+ K++ +++ + Sbjct: 423 LRDKLQPLMMKYKKEKERIDELRRLKQKREE 453 >gi|170061198|ref|XP_001866132.1| myosin heavy chain [Culex quinquefasciatus] gi|167879533|gb|EDS42916.1| myosin heavy chain [Culex quinquefasciatus] Length = 1871 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R L+ E I L+ K + L +++++ + + + + S + LK + Sbjct: 1398 TRELDEAYEKIDDLEGKRKALQNELDELANTQGTADKNVHELEKAKRALESQLAELKAQN 1457 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIP 106 L++ L + E + + +++ L + Sbjct: 1458 EELEDDLQLTEDAKLRLEVNMQALRAQFE 1486 >gi|24460119|gb|AAN61564.1|AF327451_1 JNK-associated leucine-zipper protein [Mus musculus] Length = 1307 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|70887772|ref|NP_081845.2| C-Jun-amino-terminal kinase-interacting protein 4 isoform 1 [Mus musculus] gi|56800497|emb|CAI35367.1| sperm associated antigen 9 [Mus musculus] Length = 1307 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|223044387|ref|ZP_03614421.1| glycyl-tRNA synthetase [Staphylococcus capitis SK14] gi|222442256|gb|EEE48367.1| glycyl-tRNA synthetase [Staphylococcus capitis SK14] Length = 463 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + LK L+++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNFWKTFASQWLKDLNINEENMRLRDHDADELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 289 GELWGIASRTDF 300 >gi|152994964|ref|YP_001339799.1| glycyl-tRNA synthetase [Marinomonas sp. MWYL1] gi|150835888|gb|ABR69864.1| glycyl-tRNA synthetase [Marinomonas sp. MWYL1] Length = 458 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 57/188 (30%), Gaps = 9/188 (4%) Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV 234 M H + + V + + + + T++ Sbjct: 91 CHECKSRMRADHMKDIKVCDNCGSTNVTEPRDFNLMFKTNVGPMVNEESYTYLRPETAQG 150 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 TN + S++LP + SFR+E + R +F + EL + + Sbjct: 151 IFTNFKNVVDSTSRTLPFGIAQIGKSFRNEI----TPRNFIFRVREFEQMELEFFCKPGE 206 Query: 295 SFTEHERMLSCAEEILKR---LDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREIS 351 HE + ++ + + + + DL + T D+ + + E+ Sbjct: 207 DEKWHEFWVGARKQWWLDQGLAEENIQFEYVTGDDLAHYSKSTVDILYKFP--HGFEELE 264 Query: 352 SCSTCGNF 359 + ++ Sbjct: 265 GVANRTDY 272 >gi|328780007|ref|XP_001120388.2| PREDICTED: major antigen [Apis mellifera] Length = 2026 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 38/109 (34%), Gaps = 16/109 (14%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE----------------GNLSLV 70 + I L +N+ L +++ + + R+ + ++ + + Sbjct: 838 VDEIEKLKTENKDLKSEVQGLESERDRLTNEVADLKPKISELQEKLTDASKKLDEAKTED 897 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 L+ E LK++L KE ++ + + L + + E + Sbjct: 898 SDLRAEVDRLKKELESAGKEIDQLKAEMNSLKNGLNKCVEEMEKLTNEN 946 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 15/92 (16%) Query: 17 ALKKRHLEPQ---SEYILSLDE---KNRILIKKIEDIRARRNSNSAQIGQAIAE------ 64 LK ++ E + + + LD+ +N L+ ++ ++ S +I Q +E Sbjct: 773 NLKAKNTELEENLANTVNELDKMRSENADLLSELNRLKQELESGRKEIDQLKSEIGSMKD 832 Query: 65 ---GNLSLVDALKNETSTLKEQLPILEKEEHE 93 + ++ LK E LK ++ LE E Sbjct: 833 ALGKCVDEIEKLKTENKDLKSEVQGLESERDR 864 >gi|299535802|ref|ZP_07049123.1| hypothetical protein BFZC1_07253 [Lysinibacillus fusiformis ZC1] gi|298729002|gb|EFI69556.1| hypothetical protein BFZC1_07253 [Lysinibacillus fusiformis ZC1] Length = 334 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 16/96 (16%) Query: 9 QNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQIGQA 61 +NP+ + + + L+ + ILS+D KN +IE +A +N I QA Sbjct: 197 ENPDMISQTVLSKGLDSGTAFEILSIDIADVDIGKNIGAELQIEQAQADKN-----IAQA 251 Query: 62 IAEGNLSLV----DALKNETSTLKEQLPILEKEEHE 93 AE ++ + +K ++ E E + Sbjct: 252 KAEERRAMAVANEQEMIARVQEMKAKVVEAEAEVPQ 287 >gi|198461339|ref|XP_001361988.2| GA18234 [Drosophila pseudoobscura pseudoobscura] gi|198137314|gb|EAL26567.2| GA18234 [Drosophila pseudoobscura pseudoobscura] Length = 1683 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 13/102 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQI 58 LD + R + KKR+++ E+ R K++E++RA R S ++ Sbjct: 1206 LDPEIERDRVKKFQEQEKKRYMQ----------EERRFDIKHQKQLEELRATRESAIREL 1255 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 Q E +LV+ + + E+L +E E K+ Sbjct: 1256 EQLQNEKRKALVEHEHVKLQEIDERLKAELREWREQLVPRKQ 1297 >gi|126652818|ref|ZP_01724963.1| hypothetical protein BB14905_09070 [Bacillus sp. B14905] gi|169829176|ref|YP_001699334.1| hypothetical protein Bsph_3720 [Lysinibacillus sphaericus C3-41] gi|126590354|gb|EAZ84474.1| hypothetical protein BB14905_09070 [Bacillus sp. B14905] gi|168993664|gb|ACA41204.1| UPF0365 protein [Lysinibacillus sphaericus C3-41] Length = 334 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 16/96 (16%) Query: 9 QNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQIGQA 61 +NP+ + + + L+ + ILS+D KN +IE +A +N I QA Sbjct: 197 ENPDMISQTVLSKGLDSGTAFEILSIDIADVDIGKNIGAELQIEQAQADKN-----IAQA 251 Query: 62 IAEGNLSLV----DALKNETSTLKEQLPILEKEEHE 93 AE ++ + +K ++ E E + Sbjct: 252 KAEERRAMAVANEQEMIARVQEMKAKVVEAEAEVPQ 287 >gi|94717649|sp|Q58A65|JIP4_MOUSE RecName: Full=C-Jun-amino-terminal kinase-interacting protein 4; Short=JIP-4; Short=JNK-interacting protein 4; AltName: Full=JNK-associated leucine-zipper protein; Short=JLP; AltName: Full=JNK/SAPK-associated protein 2; Short=JSAP2; AltName: Full=Mitogen-activated protein kinase 8-interacting protein 4; AltName: Full=Sperm-associated antigen 9 Length = 1321 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|62122363|dbj|BAD93176.1| JSAP2a [Mus musculus] Length = 1321 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|14520349|ref|NP_125824.1| hypothetical protein PAB0081 [Pyrococcus abyssi GE5] gi|5457564|emb|CAB49055.1| Hypothetical protein, containing archaeal coiled-coil domain [Pyrococcus abyssi GE5] Length = 300 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 14/136 (10%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 +PE + KR + L + R + K+E+++ N I + Sbjct: 6 DPEEIKR--IKR-------ELEELHNEKRNIELKLEELQKELN-----IWVQKRDEKNLE 51 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 V L+ + K + + + E+ + ++ + + + E + T +E +R + Sbjct: 52 VKRLREKAREFKAKRDEINQRIKELKKNRDEINAKLDLLYQEALEYRTKRDEFRQLRRLK 111 Query: 130 KKPSAIHLSREHFEIG 145 I E E Sbjct: 112 MPKEKIEERIEKLEWE 127 >gi|312836821|ref|NP_001186132.1| C-Jun-amino-terminal kinase-interacting protein 4 isoform 5 [Mus musculus] Length = 1321 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|331219126|ref|XP_003322240.1| hypothetical protein PGTG_03777 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301230|gb|EFP77821.1| hypothetical protein PGTG_03777 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1513 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 19/170 (11%), Positives = 51/170 (30%), Gaps = 4/170 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNET 77 KR L+ + + + L+ + ++IE ++ R + ++ ++ + + E Sbjct: 1144 KRELDLKLDELEKLESEKATQEQEIEQLQNRLSEARDEVESLLSKSQEQQERLQENEKER 1203 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV-PIGTSANENILIRSVGKKPSAIH 136 L + LE + L + + + V + + + I Sbjct: 1204 EALSDDKEDLEDQLEAANLKLHETEAQLSQVTEARDSMDAEIRALHTQKKESSASSAKIE 1263 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 +E E ++ + L+ + T + H Sbjct: 1264 QLQETISKLETENAEYAEQHSSLTAEVRQLKTELERKAH-TIINSEKSYH 1312 >gi|317133446|ref|YP_004092760.1| glycyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315471425|gb|ADU28029.1| glycyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 459 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 50/151 (33%), Gaps = 13/151 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + + +P + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFLNVQRTTRRKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + L L L R+ +L F + T D+E + Sbjct: 228 KPGTDLEWFYYWKDTCKNWLLALGLTEDGIRLRDHEAEELSFYSKATTDIEFRFPF--GW 285 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 E+ + ++ +N+ R + K L + Sbjct: 286 GELWGIADRTDY---DLNAHIR-QSGKDLDY 312 >gi|119180404|ref|XP_001241677.1| hypothetical protein CIMG_08840 [Coccidioides immitis RS] Length = 780 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 50/102 (49%), Gaps = 15/102 (14%) Query: 19 KKRHLEPQSEYILSLDEK-----------NRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 +R + + +L+L E+ R ++++++ +++N +I + +G+ Sbjct: 100 ARRGILKAMDGLLTLKEEERRVIGFELGCRREALREVDNFVSKQNGL--EIALSQMQGDR 157 Query: 68 S--LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 +D+LKNE+ L++++ LE E+ + +++ + I Sbjct: 158 ETLRMDSLKNESRALQKEIMALENHLAEMKARHRQIFNEITQ 199 >gi|326671862|ref|XP_001335744.3| PREDICTED: myosin-7 [Danio rerio] Length = 1952 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 13/119 (10%), Positives = 40/119 (33%), Gaps = 13/119 (10%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ ++ + + + + + I L+ K R L ++E + + N I + Sbjct: 1791 IKDLQLRLDE-AEQIALKGGK---KQIQKLESKVRDLESELESEQKKSNELQKGIRKYER 1846 Query: 64 ---------EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 E + + L+ L+ ++ +++ + ++ + E Sbjct: 1847 RIKELTYQTEEDRKNIARLQELIDKLQAKVKTYKRQAEDAEEQANSNLTKYKKIQHELD 1905 >gi|254481839|ref|ZP_05095082.1| hypothetical protein GPB2148_1530 [marine gamma proteobacterium HTCC2148] gi|214037968|gb|EEB78632.1| hypothetical protein GPB2148_1530 [marine gamma proteobacterium HTCC2148] Length = 1019 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 4/76 (5%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIR----ARRNSNSAQIGQAIAEGNLSLVDALK 74 +KR +++ + + R + E +R A R +A + + E + + AL Sbjct: 164 RKRVAAAETKRLREEEAVQRKAQAEKEQLRKAEEAERKRIAAAEAKRLREEEAARLKALA 223 Query: 75 NETSTLKEQLPILEKE 90 + K + ++E Sbjct: 224 QKKKQRKAEEAWRKRE 239 >gi|160892139|ref|ZP_02073142.1| hypothetical protein BACUNI_04602 [Bacteroides uniformis ATCC 8492] gi|317480862|ref|ZP_07939943.1| ATP-dependent chaperone ClpB [Bacteroides sp. 4_1_36] gi|156858617|gb|EDO52048.1| hypothetical protein BACUNI_04602 [Bacteroides uniformis ATCC 8492] gi|316902947|gb|EFV24820.1| ATP-dependent chaperone ClpB [Bacteroides sp. 4_1_36] Length = 864 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 12/105 (11%) Query: 12 EHLDIA--LKKRHLE--PQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA----- 61 + + A L R++ + + L DE L +++ + + S +I Q Sbjct: 366 DAIIAAVELSNRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIERE 425 Query: 62 --IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 E + ++ + E + LKEQ + + + + K+ Sbjct: 426 AIKRENDKPKLEQIGKELAELKEQENSYKAKWQSEKTLVNKIQQN 470 >gi|123412552|ref|XP_001304086.1| hypothetical protein [Trichomonas vaginalis G3] gi|121885514|gb|EAX91156.1| hypothetical protein TVAG_497970 [Trichomonas vaginalis G3] Length = 1684 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 2/88 (2%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNETSTLKEQLP 85 E I L+E+ L + + S QI + + + + L + +KE+L Sbjct: 777 EEIHKLEEEISNLQNEKSVLETENEKLSKQIEELQEKEKSSQEENEELSKQNEEMKEKLS 836 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEV 113 +KE E L I I + Sbjct: 837 KQDKEFEEEKEKLNAKIEKIEKDLSDGN 864 >gi|314933737|ref|ZP_07841102.1| glycine--tRNA ligase [Staphylococcus caprae C87] gi|313653887|gb|EFS17644.1| glycine--tRNA ligase [Staphylococcus caprae C87] Length = 463 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + LK L+++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNFWKTFASQWLKDLNINEENMRLRDHDADELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 289 GELWGIASRTDF 300 >gi|229048607|ref|ZP_04194165.1| Glycyl-tRNA synthetase [Bacillus cereus AH676] gi|228722726|gb|EEL74113.1| Glycyl-tRNA synthetase [Bacillus cereus AH676] Length = 458 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 228 KPGEDLEWFAFWRETCKNWLLSLGMSEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|206969645|ref|ZP_03230599.1| glycyl-tRNA synthetase [Bacillus cereus AH1134] gi|218231344|ref|YP_002369706.1| glycyl-tRNA synthetase [Bacillus cereus B4264] gi|228955177|ref|ZP_04117187.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072398|ref|ZP_04205601.1| Glycyl-tRNA synthetase [Bacillus cereus F65185] gi|229082160|ref|ZP_04214625.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|229147466|ref|ZP_04275814.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|229153102|ref|ZP_04281282.1| Glycyl-tRNA synthetase [Bacillus cereus m1550] gi|229181212|ref|ZP_04308543.1| Glycyl-tRNA synthetase [Bacillus cereus 172560W] gi|296505357|ref|YP_003667057.1| hypothetical protein BMB171_C4529 [Bacillus thuringiensis BMB171] gi|206735333|gb|EDZ52501.1| glycyl-tRNA synthetase [Bacillus cereus AH1134] gi|218159301|gb|ACK59293.1| glycine--tRNA ligase [Bacillus cereus B4264] gi|228602266|gb|EEK59756.1| Glycyl-tRNA synthetase [Bacillus cereus 172560W] gi|228630368|gb|EEK87017.1| Glycyl-tRNA synthetase [Bacillus cereus m1550] gi|228636011|gb|EEK92493.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228701152|gb|EEL53673.1| Glycyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228710721|gb|EEL62693.1| Glycyl-tRNA synthetase [Bacillus cereus F65185] gi|228804518|gb|EEM51127.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|296326409|gb|ADH09337.1| hypothetical protein BMB171_C4529 [Bacillus thuringiensis BMB171] Length = 458 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 228 KPGEDLEWFAFWRETCKNWLLSLGMSEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|332799250|ref|YP_004460749.1| 2,3 cyclic-nucleotide 2-phosphodiesterase [Tepidanaerobacter sp. Re1] gi|332696985|gb|AEE91442.1| 2,3 cyclic-nucleotide 2-phosphodiesterase [Tepidanaerobacter sp. Re1] Length = 512 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSL-DEKNRILIKKIEDIR-ARRNSNSAQIGQAI 62 + I ++ E+ ++K+ L E IL L +E + L ++ +++ + R + G Sbjct: 40 KKIVEDAENKAESIKREALVEAKEEILKLKNEAEKELRERRNELQRSERRLIQKEEGIDK 99 Query: 63 A----EGNLSLVDALKNETSTLKEQLPILEKEE 91 E + +NE S + E++ L ++ Sbjct: 100 KIEAIEKKEEAITKKQNEISQIHEKVNELYSQQ 132 >gi|317474140|ref|ZP_07933417.1| ATP-dependent chaperone ClpB [Bacteroides eggerthii 1_2_48FAA] gi|316909711|gb|EFV31388.1| ATP-dependent chaperone ClpB [Bacteroides eggerthii 1_2_48FAA] Length = 864 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 12/105 (11%) Query: 12 EHLDIA--LKKRHLE--PQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA----- 61 + + A L R++ + + L DE L +++ + + S +I Q Sbjct: 366 DAIIAAVELSNRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIERE 425 Query: 62 --IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 E + ++ + E + LKEQ + + + + K+ Sbjct: 426 AIKRENDRPKLEQIGKELAELKEQEKSYKAKWQSEKTLVNKIQQN 470 >gi|296131670|ref|YP_003638917.1| methyl-accepting chemotaxis sensory transducer [Thermincola sp. JR] gi|296030248|gb|ADG81016.1| methyl-accepting chemotaxis sensory transducer [Thermincola potens JR] Length = 684 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 39/105 (37%), Gaps = 9/105 (8%) Query: 12 EHLDIALKKRHLEPQSEYILS-----LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 E +++R + + I+ L+E + + +IE + + Q+ A GN Sbjct: 75 EKFVKEMQER--AAKVDEIIEQRLPVLEENEKEIFLQIEKVHKEFTAIQKQVVDAYKSGN 132 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + L E +E+ L+ ++ +++ + E Sbjct: 133 MEEAKRLSLEVG--REKRKNLDPLFAQLEKQIQEDLEKSNTEMHE 175 >gi|218130541|ref|ZP_03459345.1| hypothetical protein BACEGG_02130 [Bacteroides eggerthii DSM 20697] gi|217986885|gb|EEC53216.1| hypothetical protein BACEGG_02130 [Bacteroides eggerthii DSM 20697] Length = 864 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 12/105 (11%) Query: 12 EHLDIA--LKKRHLE--PQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA----- 61 + + A L R++ + + L DE L +++ + + S +I Q Sbjct: 366 DAIIAAVELSNRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIERE 425 Query: 62 --IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 E + ++ + E + LKEQ + + + + K+ Sbjct: 426 AIKRENDRPKLEQIGKELAELKEQEKSYKAKWQSEKTLVNKIQQN 470 >gi|291405244|ref|XP_002719055.1| PREDICTED: rabaptin, RAB GTPase binding effector protein 1 [Oryctolagus cuniculus] Length = 864 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 149 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 206 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 207 AEDKIQELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 266 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 267 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 306 >gi|168058265|ref|XP_001781130.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667448|gb|EDQ54078.1| predicted protein [Physcomitrella patens subsp. patens] Length = 2302 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 10/94 (10%) Query: 15 DIALKKR-------HLEPQSEYILSLDEKNR-ILIKKIEDIRARRNSNSAQIGQAIAEGN 66 ++KR + E L+ + + K +E++ R + +I + Sbjct: 1848 KEKMEKRRRLEEVMKANREMEERQRLELERKAQKQKALEEMEKERKTIEEEIKRQKRLEK 1907 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 V+ + + +L LE +E + Sbjct: 1908 EKEVEQRRKKEEE--RELAWLESKEATRKRKEEA 1939 >gi|163783128|ref|ZP_02178123.1| hypothetical protein HG1285_01095 [Hydrogenivirga sp. 128-5-R1-1] gi|159881808|gb|EDP75317.1| hypothetical protein HG1285_01095 [Hydrogenivirga sp. 128-5-R1-1] Length = 362 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 7/125 (5%) Query: 6 WIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG 65 + ++ E L + + P S +D R L ++IE ++A+R++ A+ G A+ Sbjct: 142 LLEKDRERFRK-LFSKGVVP-SRKFEDVDTALRSLKREIESLKAKRSAVLARKGVLRAKL 199 Query: 66 N-----LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++ALK + LK + LE E + E + Sbjct: 200 KQVGEIDKRIEALKRQKRALKSKEEDLENLLQETVLRSPVEGYVVKRFVSEGEVVRQGQF 259 Query: 121 ENILI 125 + Sbjct: 260 IYAVY 264 >gi|164424998|ref|XP_961939.2| hypothetical protein NCU06579 [Neurospora crassa OR74A] gi|157070746|gb|EAA32703.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 1515 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 14/103 (13%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQS----EYILSLDEKNRILIKKIEDIRARRN-SNS 55 MLD+Q A R +E + ++D+ + + E + + N Sbjct: 1394 MLDLQE--------RQAEINREMEATLRVAEAKVKAIDQLYKEATAENELLYEKFNSELG 1445 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 + +G + L + E+ ++KE + + Sbjct: 1446 KILKALKGKGR-EDKEELMAKLREQSEEAARVKKENARLKREM 1487 >gi|74194910|dbj|BAE26035.1| unnamed protein product [Mus musculus] Length = 615 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 3/91 (3%) Query: 14 LDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL--V 70 + L R + ++ + DE+ + L+++ E + ++ NS I + A+ + + Sbjct: 525 IKEELATRLNSSQTADLLKEKDEQIQGLMEEGEKLSKQQLHNSNIIKKLRAKDKDNENVI 584 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 L + L+E+L L + K+ Sbjct: 585 AKLNRKAKELEEELQHLRQVLDGKEEVEKQH 615 >gi|310789927|gb|EFQ25460.1| threonyl-tRNA synthetase [Glomerella graminicola M1.001] Length = 526 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 6/116 (5%) Query: 202 RDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 R G+G+ + A+ D L P + +++ + + LP+RF +P Sbjct: 150 RSPPHEGSGETARTAE---GEDDDYGLKPMNCPGHCLIFASKTRSYRDLPIRFADFSPLH 206 Query: 262 RSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHY 317 R+E A G+ R +F + + R E + L + + L L Y Sbjct: 207 RNEISGALS---GLTRVRRFHQDDGHIFCRPIQIREEVFKTLDFMKTVYGALGLDY 259 >gi|223975969|gb|ACN32172.1| unknown [Zea mays] Length = 912 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 12/103 (11%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKARLIEVRKELDD 453 Query: 69 LVDAL----------KNETSTLKEQLPILEKEEHEVCSSLKKL 101 L D L K +++ E+ + + + +++ Sbjct: 454 LRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFTLQEAERRM 496 >gi|162458166|ref|NP_001104935.1| heat-shock protein 101 [Zea mays] gi|4584957|gb|AAD25223.1|AF077337_1 heat shock protein 101 [Zea mays] gi|4928488|gb|AAD33606.1|AF133840_1 heat shock protein HSP101 [Zea mays] Length = 912 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 12/103 (11%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKARLIEVRKELDD 453 Query: 69 LVDAL----------KNETSTLKEQLPILEKEEHEVCSSLKKL 101 L D L K +++ E+ + + + +++ Sbjct: 454 LRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFTLQEAERRM 496 >gi|32476484|ref|NP_869478.1| glycyl-tRNA synthetase [Rhodopirellula baltica SH 1] gi|32447029|emb|CAD78935.1| glycyl-tRNA synthetase [Rhodopirellula baltica SH 1] Length = 558 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 9/107 (8%) Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL---HY 317 FR+E R +F + E+ S + +L L Sbjct: 266 FRNEI----TPRNFTFRSREFEQMEIEFFCHPNQSQEWYRYWRDRRMAWYTKLGLSNESL 321 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAG--QNLYREISSCSTCGNFQSR 362 + T +L + T D+E + Y E+ + G+F R Sbjct: 322 IMREHHTEELAHYSVGTADIEYAFPFLPEGEYGELEGIAHRGDFDLR 368 >gi|327543225|gb|EGF29659.1| glycyl-tRNA synthetase [Rhodopirellula baltica WH47] Length = 555 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 9/107 (8%) Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL---HY 317 FR+E R +F + E+ S + +L L Sbjct: 263 FRNEI----TPRNFTFRSREFEQMEIEFFCHPNQSQEWYRYWRDRRMAWYTKLGLSNESL 318 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAG--QNLYREISSCSTCGNFQSR 362 + T +L + T D+E + Y E+ + G+F R Sbjct: 319 IMREHHTEELAHYSVGTADIEYAFPFLPEGEYGELEGIAHRGDFDLR 365 >gi|257439266|ref|ZP_05615021.1| glycine--tRNA ligase [Faecalibacterium prausnitzii A2-165] gi|257198308|gb|EEU96592.1| glycine--tRNA ligase [Faecalibacterium prausnitzii A2-165] Length = 275 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 12/122 (9%) Query: 260 SFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL---H 316 +FR+E R +F + E + E L L + H Sbjct: 4 AFRNEI----TPGNFTFRTREFEQMECEFFCKPGTDLDWFAYWKDYCENWLLSLGIKKEH 59 Query: 317 YRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSL 376 R+ +L F + T D+E + + E+ + N+ +R+++ + KSL Sbjct: 60 LRLRDHEPAELAFYSRATTDIEYAFPFTD-WGELWGIADRTNYD----LTRHQEASGKSL 114 Query: 377 KF 378 ++ Sbjct: 115 EY 116 >gi|205374152|ref|ZP_03226952.1| hypothetical protein Bcoam_13464 [Bacillus coahuilensis m4-4] Length = 334 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 38/97 (39%), Gaps = 18/97 (18%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + + L+ + ILS+D I ++ +++ + Sbjct: 193 KKVLENPDLISQTVLTKGLDAGTAFEILSID------IADVDIGKNIGAELQTEQAEADK 246 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEK 89 I QA AE ++ + + ++ ++ E Sbjct: 247 NIAQAKAEERRAMAVAQEQEMVAKVQEMRAKVVEAEA 283 >gi|256004351|ref|ZP_05429332.1| conserved hypothetical protein [Clostridium thermocellum DSM 2360] gi|281417577|ref|ZP_06248597.1| band 7 protein [Clostridium thermocellum JW20] gi|255991635|gb|EEU01736.1| conserved hypothetical protein [Clostridium thermocellum DSM 2360] gi|281408979|gb|EFB39237.1| band 7 protein [Clostridium thermocellum JW20] gi|316940391|gb|ADU74425.1| band 7 protein [Clostridium thermocellum DSM 1313] Length = 329 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 40/100 (40%), Gaps = 18/100 (18%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSN 54 D + + +NP+ + + + L+ + ILS+D I I+ ++ + Sbjct: 187 DHKQVLENPDAISKTVLSKGLDAGTAFEILSID------IADIDVGRNVGAQLQTDQAEA 240 Query: 55 SAQIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 +I QA AE ++ +K ++ ++ E E Sbjct: 241 DKRIAQAKAEERRAMAVAREQEMKAMVQEMRAKVVEAEAE 280 >gi|167042367|gb|ABZ07095.1| putative RecF/RecN/SMC N terminal domain protein [uncultured marine crenarchaeote HF4000_ANIW97M7] Length = 686 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 39/136 (28%), Gaps = 5/136 (3%) Query: 33 LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNETSTL---KEQLPIL 87 L EK + +E+++ N I + + + ++ K + L KE+L + Sbjct: 178 LTEKYNNTDEDVENVQMEINHAEKIIANSKPQKEKLEEMAESFKEKIKKLQEKKEELSVN 237 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 ++ + + I V ++ I E + Sbjct: 238 YEKIIHLKDKEDNVWKSIKQEISSLVTDNEEHSKIIQRCEESFGVIKAKSKIEDLLNSKN 297 Query: 148 LGLMDFDRATKLSGAR 163 D D+ + Sbjct: 298 SKKKDIDQKISECDGK 313 >gi|239828654|ref|YP_002951278.1| glycyl-tRNA synthetase [Geobacillus sp. WCH70] gi|239808947|gb|ACS26012.1| glycyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 460 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 173 TAQGIFVNFKNVQRTMRKKLPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + ++ L L + + L +L + T D+E + Sbjct: 229 KPGEELEWFDYWKQFCKQWLLSLGMKPENIRLRDHTKEELSHYSNATTDIEYKFPF--GW 286 Query: 348 REISSCSTCGNF 359 E+ ++ ++ Sbjct: 287 GELWGIASRTDY 298 >gi|126307494|ref|XP_001363858.1| PREDICTED: similar to sperm associated antigen 9 isoform 1 [Monodelphis domestica] Length = 1304 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ S LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEERESELKKEYNALHQRHTEMIHNYMEHLEKTKLH 180 >gi|125973375|ref|YP_001037285.1| hypothetical protein Cthe_0858 [Clostridium thermocellum ATCC 27405] gi|167016830|sp|A3DDR3|Y858_CLOTH RecName: Full=UPF0365 protein Cthe_0858 gi|125713600|gb|ABN52092.1| protein of unknown function DUF1432 [Clostridium thermocellum ATCC 27405] Length = 329 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 40/100 (40%), Gaps = 18/100 (18%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSN 54 D + + +NP+ + + + L+ + ILS+D I I+ ++ + Sbjct: 187 DHKQVLENPDAISKTVLSKGLDAGTAFEILSID------IADIDVGRNVGAQLQTDQAEA 240 Query: 55 SAQIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 +I QA AE ++ +K ++ ++ E E Sbjct: 241 DKRIAQAKAEERRAMAVAREQEMKAMVQEMRAKVVEAEAE 280 >gi|301620039|ref|XP_002939390.1| PREDICTED: intersectin-1 [Xenopus (Silurana) tropicalis] Length = 1709 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 55/159 (34%), Gaps = 6/159 (3%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 Q +R + ++ + R + + + ++ R L + ++ +++ + +I Q E Sbjct: 582 QQLRDQLDEVEK--ETRAKLQEIDVFNNQLKELREL-YNRQQLQKQKDFEAEKIKQKELE 638 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 S +D +K E K ++ +K + ++ + E Sbjct: 639 RKTSELDKMKEED---KRRMLEQDKLWQDRVKQEEERYKFQDEEKQKREESAQQCEEEKK 695 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 K HL E ++G + M+ ++A Sbjct: 696 PEIQEKPNKLFHLPPEPGKLGGHVPWMNTEKAPLTFNQG 734 >gi|254580669|ref|XP_002496320.1| ZYRO0C15686p [Zygosaccharomyces rouxii] gi|238939211|emb|CAR27387.1| ZYRO0C15686p [Zygosaccharomyces rouxii] Length = 1105 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 50/168 (29%), Gaps = 3/168 (1%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNETST 79 + +L ++++ + L ++E+++ N QI A A K Sbjct: 637 NRNVNVVKVLEMEKEMKNLRTQVEELQIDSNIKKDQISAANTKVSDLELERSAFKETMLN 696 Query: 80 LKEQLPI-LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 L +L E+E+ + ++K + T E + + + Sbjct: 697 LNRELSRLTEQEQLQKKDLVQKQSMYQNQLCHIINENKTLLQEIETLEEKHRNLQHVQEQ 756 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 +E + + G L +L Q + LH Sbjct: 757 KEQHIAKTKEDFDAEKLTWQNGLHKLENENGELKDQVSSLKQELAHLH 804 >gi|157041213|ref|NP_001096042.2| coiled-coil domain-containing protein 83 [Danio rerio] gi|157002257|gb|ABR68552.2| ts1 [Danio rerio] Length = 391 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 52/119 (43%) Query: 18 LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNET 77 +K++ ++ + I L++K + L+K+ E++R + ++ + + + E +L + + Sbjct: 21 IKRKEIQDIKDEIHQLEDKRQKLMKEQEELREEQAKHAREQRRRMKEMEENLEKKEREDQ 80 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 LKE K +H+ L++L + + +E + + ++ G Sbjct: 81 ELLKETTQENMKLKHKQEKELEELCCKLARLQVEVEKQTAERDAWLQYKTEGSMKDQQK 139 >gi|229112357|ref|ZP_04241895.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228671005|gb|EEL26311.1| Glycyl-tRNA synthetase [Bacillus cereus Rock1-15] Length = 487 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 201 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 256 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 257 KPGEDLEWFAFWRETCKNWLLSLGMSEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 314 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 315 GELWGVASRTDFDLKR 330 >gi|115305794|sp|Q7UEU9|SYG_RHOBA RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS Length = 536 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 9/107 (8%) Query: 261 FRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL---HY 317 FR+E R +F + E+ S + +L L Sbjct: 244 FRNEI----TPRNFTFRSREFEQMEIEFFCHPNQSQEWYRYWRDRRMAWYTKLGLSNESL 299 Query: 318 RVVSLCTGDLGFSACKTYDLEVWLAG--QNLYREISSCSTCGNFQSR 362 + T +L + T D+E + Y E+ + G+F R Sbjct: 300 IMREHHTEELAHYSVGTADIEYAFPFLPEGEYGELEGIAHRGDFDLR 346 >gi|172087198|ref|XP_001913141.1| M-phase phosphoprotein [Oikopleura dioica] gi|18029268|gb|AAL56446.1| M-phase phosphoprotein-like protein [Oikopleura dioica] Length = 1203 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 57/139 (41%), Gaps = 8/139 (5%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN------ETSTL 80 S+ ++ L+ +NR L++ + + + ++ + + E L +AL++ E L Sbjct: 681 SDKVVELEIENRQLLEDNDGLSHQI-EIGKEMLKKLREEKSELQNALEHAKKSDPEVEEL 739 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPL-EEVPIGTSANENILIRSVGKKPSAIHLSR 139 K+QL I + + + +KL + + + E+ + + ++ + + + + Sbjct: 740 KKQLEIYKSDLTSMEMECQKLNASLADAIRKEKELVYNLDQQTNSMQDIQSQRDELQKTV 799 Query: 140 EHFEIGEALGLMDFDRATK 158 + E D + + Sbjct: 800 DTLEKRIQQLECDLETSEN 818 >gi|14590077|ref|NP_142141.1| hypothetical protein PH0134 [Pyrococcus horikoshii OT3] gi|3256520|dbj|BAA29203.1| 300aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 300 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 14/136 (10%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 +PE + KR + L E+ R + K+E+++ N+ + Sbjct: 6 DPEEIKR--IKR-------ELEELQEEKRKIEIKLEELQKELNTW-----IQKRDEKNLE 51 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 V L+ + K + + + E+ + ++ + + + E + T +E +R + Sbjct: 52 VKRLREKAREFKAKRDEINQRIKELKKNRDEINAKLDLLYQEVLEYRTKRDEFKQLRRLK 111 Query: 130 KKPSAIHLSREHFEIG 145 I E E Sbjct: 112 MPKEKIEERIEKLEWE 127 >gi|329961410|ref|ZP_08299533.1| ATP-dependent chaperone protein ClpB [Bacteroides fluxus YIT 12057] gi|328531887|gb|EGF58710.1| ATP-dependent chaperone protein ClpB [Bacteroides fluxus YIT 12057] Length = 864 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 12/105 (11%) Query: 12 EHLDIA--LKKRHLE--PQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA----- 61 + + A L R++ + + L DE L +++ + + S +I Q Sbjct: 366 DAIIAAVELSNRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIERE 425 Query: 62 --IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 E + ++ + E + LKEQ + + + + K+ Sbjct: 426 AIKRENDKPKLEQIGKELAELKEQESSYKAKWQSEKTLVNKIQQN 470 >gi|297695908|ref|XP_002825166.1| PREDICTED: cytoplasmic dynein 1 heavy chain 1-like, partial [Pongo abelii] Length = 3655 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 2215 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 2269 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 2270 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 2329 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 2330 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 2388 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 2389 EIVNRASLA 2397 >gi|283782116|ref|YP_003372871.1| glycyl-tRNA synthetase [Pirellula staleyi DSM 6068] gi|283440569|gb|ADB19011.1| glycyl-tRNA synthetase [Pirellula staleyi DSM 6068] Length = 537 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 79/292 (27%), Gaps = 22/292 (7%) Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 E + + + + E+ + RE Sbjct: 66 APYEMTGLDCTIIMHPQVWKVSGHFDLFHDFMVDCRESKKRYRYDQVRGRWVTYREQTIF 125 Query: 145 GEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDE 204 +D ++ + A + E + L T + +T+V L D Sbjct: 126 VATNVEVDKEQEDVQTRALKFFKLRNKDAEEITWTSEFVSLTTLGNDFTKV----LAPDA 181 Query: 205 AMYGTGQIPKFADDMFCT---------TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFT 255 GT P+ + MF T T++ N + +P Sbjct: 182 KELGTLLEPREFNLMFKTIVGALGTAEDAAFLRPETAQGIFVNFKNVCDSTRVRVPFGIA 241 Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + SFR+E R +F + E+ S ++ + + L Sbjct: 242 QVGKSFRNEI----TPKNFTFRSREFEQMEIEFFCHPSTSREWYQYWRDRRMKWYTDMGL 297 Query: 316 HYRVVSL---CTGDLGFSACKTYDLEVWLAG--QNLYREISSCSTCGNFQSR 362 + L +L +C T D+E Y E+ + G+F R Sbjct: 298 STERLQLREHHVEELSHYSCGTADIEYAFPFLPAGEYGELEGIAHRGDFDLR 349 >gi|73955343|ref|XP_546569.2| PREDICTED: similar to rabaptin, RAB GTPase binding effector protein 1 [Canis familiaris] Length = 873 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 158 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 215 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 216 TEDKVKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 275 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 276 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 315 >gi|508538|gb|AAA62617.1| alpha-internexin [Mus musculus] Length = 504 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETSTLKEQL 84 L L+ +S E L Sbjct: 146 ELRELRAQLEEASSARAEAL 165 >gi|326794213|ref|YP_004312033.1| glycyl-tRNA synthetase [Marinomonas mediterranea MMB-1] gi|326544977|gb|ADZ90197.1| glycyl-tRNA synthetase [Marinomonas mediterranea MMB-1] Length = 458 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 13/159 (8%) Query: 204 EAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 M+ T P +D + T++ TN + S++LP + SFR+ Sbjct: 124 NLMFKTNVGPMVNEDSY----TYLRPETAQGIFTNFKNVVDSTSRALPFGIAQIGKSFRN 179 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL---HYRVV 320 E + R +F + EL + + H+ + ++ L + + Sbjct: 180 EI----TPRNFIFRVREFEQMELEFFCKPGEDEKWHDFWVETRKQWWLDQGLTEENIQFE 235 Query: 321 SLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 + DL + T D+ + + E+ + ++ Sbjct: 236 YVTGDDLAHYSKSTVDILYKFP--HGFEELEGVANRTDY 272 >gi|228923648|ref|ZP_04086927.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228961167|ref|ZP_04122789.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229130174|ref|ZP_04259134.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|229193180|ref|ZP_04320132.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228590300|gb|EEK48167.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228653288|gb|EEL09166.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|228798514|gb|EEM45505.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228836009|gb|EEM81371.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 487 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 201 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 256 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 257 KPGEDLEWFAFWRETCKNWLLSLGMSEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 314 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 315 GELWGVASRTDFDLKR 330 >gi|190344951|gb|EDK36745.2| hypothetical protein PGUG_00843 [Meyerozyma guilliermondii ATCC 6260] Length = 485 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 18/161 (11%), Positives = 56/161 (34%), Gaps = 10/161 (6%) Query: 4 IQWIRQNPEHLDIA-----LKKRHLEPQSEYILSLDEKNRILIKKIEDI---RARRNSNS 55 I+ +R N A + R++ E +++ + L K +E++ AR+N + Sbjct: 295 IEDLRSNLNEYQQAASSQEQRNRNINISIEAFQIIEQNIKNLFKILEEVSNDLARQNRIA 354 Query: 56 AQIGQA--IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 ++ + + E + S L+ ++ + E++ ++ + Sbjct: 355 EELNKHQDMLEEKKQESHEYGRQISALQRKINVNEEKTQKLREGFNRETERQQQETATLR 414 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFD 154 +++ + + + ++R I + + Sbjct: 415 QEYEKLSQDRATKEEELERTRKEINRYEHMINSEKNEFNIE 455 >gi|153808043|ref|ZP_01960711.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185] gi|149129652|gb|EDM20866.1| hypothetical protein BACCAC_02329 [Bacteroides caccae ATCC 43185] Length = 646 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 46/167 (27%), Gaps = 9/167 (5%) Query: 189 EHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC-TTDGRWLIPTSEVSLTNLYSHEII-- 245 + Y EV P + +G K+ D F + + EI Sbjct: 287 RYDYQEVITPPIGNKLLYVTSGHYAKYGKDAFQPIHTPEEGEEYFLKPMNCPHHCEIYKN 346 Query: 246 ---ESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERM 302 K LPLR R E + G+ R F + + R + E R+ Sbjct: 347 FPRSYKDLPLRIAEFGTVCRYEQSG---ELHGLTRVRSFTQDDAHIFCRPDQVKDEFLRV 403 Query: 303 LSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + + ++ + D + W + E Sbjct: 404 MDIISIVFRSMNFQNFEAQISLRDKVNREKYIGSDDNWEKAEQAIIE 450 >gi|148704248|gb|EDL36195.1| centromere protein J, isoform CRA_a [Mus musculus] Length = 1299 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLD--EKNRILIKKIEDIRARRNSNSAQIGQAI-- 62 +R E L+K + + + L E+ R ++ ++ R A Sbjct: 873 LRIERESALEKLRKEIADFEQQKARELARIEEYRK--EETRKLQKERKVFEKYTAAARTF 930 Query: 63 -AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 + + ALK + + L+E L E + S L+ I + Sbjct: 931 PDKKEREEIQALKQQIADLQEDLKRKETKWSSTQSRLRSQIEML 974 >gi|123390967|ref|XP_001299982.1| inversin protein alternative isoform [Trichomonas vaginalis G3] gi|121880941|gb|EAX87052.1| inversin protein alternative isoform, putative [Trichomonas vaginalis G3] Length = 1469 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 7/94 (7%) Query: 9 QNPEHLDIALK--KRHLEPQS-EYILS-LDEKNRIL---IKKIEDIRARRNSNSAQIGQA 61 QN E + LK K++++ + I+ LD K + + +KI+ ++ N Q Sbjct: 76 QNFEDVISTLKSIKKYMKLRILNSIVDFLDSKGKEIYDSTEKIQKLQTELNEIPKQKSDN 135 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 + S ++ + E++ LKE+L +E ++ Sbjct: 136 EIQSLQSQLNQINEESNKLKEKLNEMESNTNQAD 169 >gi|73946491|ref|XP_857776.1| PREDICTED: similar to kinesin family member 27 isoform 3 [Canis familiaris] Length = 1330 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Query: 9 QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA-QIGQAIAEGN 66 ++P+ +KKR + + LDE+ + L +++E + +R Q E Sbjct: 829 EDPDAFK--MKKRKGSFGSIDQLQKLDEQKKWLDEEVEKVLNQRQELEELQEDLKKREAI 886 Query: 67 LSLVDALKNETSTLKEQ 83 + +AL E S L+ + Sbjct: 887 VCKKEALLKEKSHLENK 903 >gi|313241800|emb|CBY34014.1| unnamed protein product [Oikopleura dioica] Length = 2635 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 48/160 (30%), Gaps = 8/160 (5%) Query: 11 PEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 E L K R + + I L ++N+ L + D + + + + A+G Sbjct: 2090 LEDFKKTLEAKARDIAELEQEIEELKDENKELKVEAYDAQNYKKKFKKAVDEKHAQGQDL 2149 Query: 69 LV-----DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 D L + LK++L E + + + + Sbjct: 2150 EELTTLYDQLLLKNDELKQKLARCRNELELLQEPYDQKLFENAQNSSRRLSDSLLIRIPS 2209 Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 + K I + +E + +D + +S + Sbjct: 2210 PEGRMLKNNDEIFVDQEKLS-QQKRDPVDDNALWNISKMK 2248 >gi|301630819|ref|XP_002944514.1| PREDICTED: chaperone protein clpB-like, partial [Xenopus (Silurana) tropicalis] Length = 739 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 9/141 (6%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A K +E S E I LD + L + E ++ ++ S + Q I Sbjct: 256 IDLIDEAAAKIKIEIDSKPEAIDKLDRRLIQLQIEREAVKREKDEASQKRLQLI----EE 311 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 + L+ E + L++ I + E+ + S + E + Sbjct: 312 EITKLQREIADLED---IWKSEKAQAQGSQQVREQIEKVKLQIEELKRQGDFNKVAELQY 368 Query: 129 GKKPSAIHLSREHFEIGEALG 149 G+ P +E E G Sbjct: 369 GQLPELEKRLKEAQAQEEGQG 389 >gi|156088415|ref|XP_001611614.1| hypothetical protein [Babesia bovis T2Bo] gi|154798868|gb|EDO08046.1| hypothetical protein BBOV_III004830 [Babesia bovis] Length = 480 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 32/82 (39%), Gaps = 10/82 (12%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN- 66 ++N E L L R+ + ++ + + + + ++++ +R RN + + + Sbjct: 397 KENYETLYTDLINRNAQL-ADQLAEITRERNNIEQELDTVRGERNRLDKHVQSVVKDLER 455 Query: 67 --------LSLVDALKNETSTL 80 V+ LK + L Sbjct: 456 LRFDNQCLEKQVEDLKAKVRKL 477 >gi|17532015|ref|NP_495359.1| IFT (Chlamydomonas IntraFlagellar Transport) homolog family member (ift-74) [Caenorhabditis elegans] gi|14573847|gb|AAC46692.2| Ift (chlamydomonas intraflagellar transport) homolog protein 74, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 674 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 31/228 (13%), Positives = 82/228 (35%), Gaps = 13/228 (5%) Query: 2 LDIQWIRQ----NPEHLDIALKKRHLEPQSEYILSLDEK----NRILIKKIEDIR---AR 50 LD+ I + N + DI L+ ++ Q++ + SL E+ R ++++ + Sbjct: 241 LDLNKIMEKIHLNGDMSDIELEASKMKEQADEMRSLAEEVFNERRAKEEELQGLEIEVEE 300 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + + + A+ + LK+E L+E++ +E + ++ + K I + PL Sbjct: 301 QKKLNEAVTHAMDPQMKEKYEDLKSEAKLLRERVVEMEAKNEDLDDRISKYEIEIRSNPL 360 Query: 111 EEVPIGTSANENILIRSVG--KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLT 168 ++ I + L + + L+ E + + + + + + + Sbjct: 361 KKKAIQLQETLDTLKKQEEKLMEDMQSALTPEAWRDKMSENMKQLNADLVVIEKQHKTVK 420 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA 216 ++ L ++ + LL + + T + Sbjct: 421 DQISLASEELHEYDSQGEAQIMAHHTKYLDLLSKSTMLDDTTENYPQQ 468 >gi|302501324|ref|XP_003012654.1| hypothetical protein ARB_00904 [Arthroderma benhamiae CBS 112371] gi|291176214|gb|EFE32014.1| hypothetical protein ARB_00904 [Arthroderma benhamiae CBS 112371] Length = 1580 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 5/97 (5%) Query: 34 DEKNR---ILIKKIEDIRARRNSNSAQI--GQAIAEGNLSLVDALKNETSTLKEQLPILE 88 DE R L ++ E +AR + Q+ G+ + + E + +L Sbjct: 1136 DETRRQEEELAREKEAAQARLKALEEQVRQGKIKKQEQKRRKQQAEQEAREKEAKLAAQR 1195 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 E ++L + ++ EE + Sbjct: 1196 AELEAAQERERELQRQLESLGDEESSSDDEGPGFVTP 1232 >gi|291167101|gb|EFE29147.1| membrane fusion protein [Filifactor alocis ATCC 35896] Length = 427 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 73/193 (37%), Gaps = 16/193 (8%) Query: 3 DIQWIRQNPEHLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +I+ ++ N +D LK++ +++ + + ++++N L D++ R Sbjct: 107 NIEDLQDNLRLIDYKLKEKQNVDVSKDLTMEINKRNLELQTLYADLQKR----------- 155 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV----PIGT 117 I G +++LK E ++ EQ LE ++++L + + + I Sbjct: 156 IFSGEEEYLESLKQEIISVNEQKKFLEDSVQGKNVTVEELKAQKQKLLSQINGNEYYIKA 215 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERA 177 ++ S G + +R + + E + D+D+ G + + + Sbjct: 216 PMTGIVVAYSDGYEEKLTFENRNNLTVSEIHKIKDYDQVDLKKKILAKKPVGRVVYNFKY 275 Query: 178 LGQFMIDLHTSEH 190 +D +H Sbjct: 276 YFACQVDKEDIDH 288 >gi|194224081|ref|XP_001490704.2| PREDICTED: similar to RIKEN cDNA 4930519N13 [Equus caballus] Length = 1057 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 16/100 (16%) Query: 5 QWIRQNPEHLDIALKKRHLE------PQSEYILS----LDEKNRILIKKIEDIR----AR 50 + + Q + L+ AL++RH + + + L + R + +++E A+ Sbjct: 730 RRLAQEKDQLEEALRQRHQNDLQHIRIEVDRLSEENTLLKNELRRIQQELEAAEKTNDAQ 789 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 R ++ Q E S + L ++ K++L L+ Sbjct: 790 RKEI--EVLQRDKEKACSEAEELSTQSQKYKDELSQLKHR 827 >gi|47777440|gb|AAT38073.1| hypothetical protein [Oryza sativa Japonica Group] gi|55733940|gb|AAV59447.1| hypothetical protein [Oryza sativa Japonica Group] Length = 785 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 10/110 (9%) Query: 7 IRQNPEHLDIALK-------KRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 +R + + L+ ++ LE + + +NR L ++E R R Sbjct: 531 VRAHLDGFRNRLRAKDDEIGRKGLEMEALANSLKEAKAENRRLQSELEKGREARAEVDRL 590 Query: 58 IGQA-IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + + VD LK E K L + ++ L + Sbjct: 591 KAELEKGREARAEVDRLKAELKKEKAHSIALTDYYNLTEPKMEALRLEVS 640 >gi|46447459|ref|YP_008824.1| putative beta-N-acetylglucosaminidase [Candidatus Protochlamydia amoebophila UWE25] gi|46401100|emb|CAF24549.1| putative beta-N-acetylglucosaminidase [Candidatus Protochlamydia amoebophila UWE25] Length = 550 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 49/154 (31%), Gaps = 14/154 (9%) Query: 13 HLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV 70 + L + R ++ + IL+L E + + +D++ RR S Q QA+A+ Sbjct: 356 AVRQNLISEAR-IDISVKRILALKESYHLFQSEEDDLQLRRRELSLQKNQALAKNIAEKA 414 Query: 71 -----DALKN-----ETSTLKEQLPILEKEEHEVCSSLKK-LISCIPNVPLEEVPIGTSA 119 + LK + + + E E+ + + + + E + Sbjct: 415 LHNLNEDLKISFQNPRVTLIAPDILKEELEKTDWLTPNQNVQVILFDANLKEFQTVLEKC 474 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 E + + F +A + Sbjct: 475 QEINVCVFFFYNHKKYPNHLDFFNFIKAHKNSEM 508 >gi|326916304|ref|XP_003204448.1| PREDICTED: filamin-A-interacting protein 1-like [Meleagris gallopavo] Length = 1154 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 15/93 (16%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVDAL 73 I L+E NR L K E+++ R+ + ++ EG + Sbjct: 282 RIEELEETNRSLQKAEEELQELRDKIAKGECGNSSLMAEVENLRKRVLEMEGKDEEITKT 341 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 +++ LK +L E E+ ++KL + Sbjct: 342 ESQCKELKNKLQEEEHHNKELKLEVEKLQKRMS 374 >gi|323490068|ref|ZP_08095289.1| glycyl-tRNA synthetase [Planococcus donghaensis MPA1U2] gi|323396364|gb|EGA89189.1| glycyl-tRNA synthetase [Planococcus donghaensis MPA1U2] Length = 458 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 171 TAQGIFVNYKNVQRSMRKKMPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 226 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + ++ L L+++ + L D L + T D+E + Sbjct: 227 KPGEDLEWYAYWRDFSKNWLLNLNMNEDNMRLREHDEDELSHYSNATVDIEYKFPF--GW 284 Query: 348 REISSCSTCGNFQSRR 363 E+ + +F +R Sbjct: 285 GELWGIADRTDFDLKR 300 >gi|289523384|ref|ZP_06440238.1| putative RecF/RecN/SMC N domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503076|gb|EFD24240.1| putative RecF/RecN/SMC N domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 1140 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 11/110 (10%) Query: 8 RQNPE-HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 R+N E I+ +R E ++ DE+ L I++++ RR+ Q+ A Sbjct: 154 RENLEVLFGISQYRRKREEAFLKLIRADEEALRLKTLIDELKRRRSDIHPQV--ISARKK 211 Query: 67 LSLVDALKNETSTLK--------EQLPILEKEEHEVCSSLKKLISCIPNV 108 L LK+ + +K E++ E + + SL + Sbjct: 212 RELDKELKSLSKRIKWLEYCRVIEEIKDAEDAKMRISGSLFAARLWVLLW 261 >gi|212638686|ref|YP_002315206.1| hypothetical protein Aflv_0843 [Anoxybacillus flavithermus WK1] gi|212560166|gb|ACJ33221.1| Uncharacterized protein conserved in bacteria [Anoxybacillus flavithermus WK1] Length = 329 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 14/85 (16%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSN 54 D + + +NP+ + + + L+ + ILS+D I I+ +++ + Sbjct: 189 DHKKVLENPDMISQTVLAKGLDSGTAFEILSID------IADIDIGKNIGAELQTDQAEA 242 Query: 55 SAQIGQAIAEGNLSLVDALKNETST 79 +I QA AE ++ AL+ E Sbjct: 243 DKKIAQAKAEERRAMAVALEQEMKA 267 >gi|19112184|ref|NP_595392.1| condensin subunit Cut3 [Schizosaccharomyces pombe 972h-] gi|13432112|sp|P41004|SMC4_SCHPO RecName: Full=Structural maintenance of chromosomes protein 4; AltName: Full=Cell untimely torn protein 3; AltName: Full=Chromosome segregation protein cut3 gi|5441485|emb|CAB46756.1| condensin subunit Cut3 [Schizosaccharomyces pombe] Length = 1324 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 44/115 (38%), Gaps = 12/115 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA---QIG 59 D++ IR N +KR+L+ I ++D++ + E + + +IG Sbjct: 880 DLKSIRNN------NERKRNLQ---NKISNMDKEVEAININNEGLVTEIKTLQDKIMEIG 930 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 S VD L + +K++L + ++ + + + N+ E Sbjct: 931 GIRYRIQKSKVDDLHEQLKFVKDKLNKMSFKKKKNEQRSQSFQVELSNLTSEYDT 985 >gi|269791928|ref|YP_003316832.1| prolyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099563|gb|ACZ18550.1| prolyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 478 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 13/192 (6%) Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 + + PTSE + ++YS + + LP+ R E + R LR +F Sbjct: 102 EPLVVRPTSETVIGHMYSKWVQSWRDLPILINQWCNVMRWE-----KRPRLFLRTSEFLW 156 Query: 284 CELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 E TREE + + L L G+ A T+ E + Sbjct: 157 QEGHTAHATREEAMEETLRMLGVYETIMKDVLALPVVTGEKSEGERFPGADNTFTCEAMM 216 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENY 400 + + + +S NF ++ + R++D + + +K+ T + V R + AI+ + Sbjct: 217 SDRKALQAGTSHFLGQNF-AKAFDIRFQDRDGE-VKYAWT---TSWGVSTRLIGAIIMTH 271 Query: 401 LNADGSVTIPTV 412 + DG + P V Sbjct: 272 SDDDGLILPPRV 283 >gi|194225366|ref|XP_001491244.2| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 1 [Equus caballus] Length = 4646 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3206 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3260 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3261 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3320 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3321 LESICLLLGESTTDWKQIRSVI-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3379 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3380 EIVNRASLA 3388 >gi|149040860|gb|EDL94817.1| CDC42 binding protein kinase alpha, isoform CRA_b [Rattus norvegicus] Length = 1535 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 43/116 (37%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L + +R L+ I + +++ + L ++ E+ Sbjct: 487 LEIKSLKEEIEKLRKQVAEVNHLEQQLEEANSVRRELDDAFRQIKAFEKQIKTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|149183345|ref|ZP_01861783.1| glycyl-tRNA synthetase [Bacillus sp. SG-1] gi|148848942|gb|EDL63154.1| glycyl-tRNA synthetase [Bacillus sp. SG-1] Length = 455 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 169 TAQGIFVNFKNVQRSMRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 224 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + H + L L + + L D L + T D+E + Sbjct: 225 KPGEDLEWHSYWREFCKNWLLTLGMKEDNMRLRDHDDDELSHYSNATTDIEYKFPF--GW 282 Query: 348 REISSCSTCGNFQSRR 363 E+ S +F +R Sbjct: 283 GELWGISDRTDFDLKR 298 >gi|57012336|ref|NP_001008803.1| keratin, type II cuticular Hb2 [Rattus norvegicus] gi|46485110|tpg|DAA02224.1| TPA_exp: type II keratin Kb22 [Rattus norvegicus] Length = 493 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L + IE ++A+R I QA +G +L DA K Sbjct: 302 DNLRNRK-----NEILEMNKLIQRLQQDIETVKAQRCKLEGAIAQAEQQGEAALSDA-KC 355 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 356 KLAGLEEALQKAKQDMACLLKEYQEVM 382 >gi|326933843|ref|XP_003213008.1| PREDICTED: CTTNBP2 N-terminal-like protein-like [Meleagris gallopavo] Length = 639 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 6/102 (5%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA------QIGQAIAEGNLSLVDALKNE 76 LE + + +++ + L ++E+ RAR S+ + A A L + Sbjct: 147 LEFEKSQVKKFEKEQKKLSSQLEEERARHKQLSSMLVVECKKATAKAAEESQKTAELSLK 206 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 K ++ LE+E ++ + + E Sbjct: 207 LEKEKSKVSKLEEELASKRKRGLQMEAQVEKQLSEFDIEREQ 248 >gi|300813650|ref|ZP_07093972.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512192|gb|EFK39370.1| proline--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 570 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSV 407 E+ + G S+ +N+ Y D N K+ ++ + GS G+ + R + AI+E + +G + Sbjct: 407 EVGNIFQLGTKYSKSLNATYLDRNGKA-QYFYM--GSYGIGITRTVAAIVEQNYDENG-I 462 Query: 408 TIPTVLRPYMNNLAVIKKEH 427 P PY + VI + Sbjct: 463 IWPVATAPYECIVTVINPNN 482 >gi|296215912|ref|XP_002807308.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic dynein 1 heavy chain 1-like [Callithrix jacchus] Length = 4901 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3461 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3515 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3516 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3575 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3576 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3634 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3635 EIVNRASLA 3643 >gi|190346533|gb|EDK38636.2| hypothetical protein PGUG_02734 [Meyerozyma guilliermondii ATCC 6260] Length = 752 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 67/229 (29%), Gaps = 26/229 (11%) Query: 18 LKKRHLE-PQSEYILSLDEKNRILIKK----------IEDIRARRNSNSAQIGQAIAEGN 66 + R + P + +L D + LI++ IE +R+ + +S ++ + Sbjct: 263 QEIRGDDTPALQSVLDADVWRKSLIQEEAKINERIAEIEKLRSEFDEDSNEVKKL----- 317 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + + L + E+L +E ++ E ++ S R Sbjct: 318 DNEREDLDKHLQDVNEKLYEMESDKAESKAAAILFGLGFTKESQMNPTKSFSGG----WR 373 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 A+ + + E ++D T L+ S + L + Sbjct: 374 MRLSLARALFCEPDLLLLDEPSNMLDVPSITYLARYLQSYKSTVLVVSHDRAFLNDVATD 433 Query: 187 TSEHGYTEVSAPLLVRDEAMYGT------GQIPKFADDMFCTTDGRWLI 229 + ++ Y T Q ++ + M + I Sbjct: 434 IIHQHSERLDYYRGSNFDSFYATREERIKNQRREYENQMAYRKHLQEFI 482 >gi|167755650|ref|ZP_02427777.1| hypothetical protein CLORAM_01165 [Clostridium ramosum DSM 1402] gi|167704589|gb|EDS19168.1| hypothetical protein CLORAM_01165 [Clostridium ramosum DSM 1402] Length = 457 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 30/260 (11%), Positives = 73/260 (28%), Gaps = 18/260 (6%) Query: 95 CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFD 154 E + + V + + + + Sbjct: 41 EMKNNIKQLWWKRFIQESPYNVGLDSAIFMNPRVWEASGHVGGFSDPLIDCKECKTRHRA 100 Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ-IP 213 + G + +++ D + + + + + + M+ T + Sbjct: 101 DKLIEAYDPSVHSEGWSS---EETVKYIKDHNIVCPNCGKSNFTDVRQFKLMFETQMGVV 157 Query: 214 KFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + A D+ T++ N + + K +P + +FR+E Sbjct: 158 EDAKDVVYLRPE-----TAQGIFVNFKNIQRTSRKKVPFGIGQIGKAFRNEI----TPGN 208 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFS 330 + R +F + EL + + + S ++ L L L + R +L F Sbjct: 209 FIFRMREFEQMELEFFCKPDTDLEWFDYWKSYCQKFLFDLGLKEENLRFRDHEKEELSFY 268 Query: 331 ACKTYDLEVWLAGQNLYREI 350 + T D+E + E+ Sbjct: 269 SKATCDVEYNFPF--GWGEL 286 >gi|28972155|dbj|BAC65531.1| mKIAA0325 protein [Mus musculus] Length = 1999 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 559 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 613 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 614 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 673 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 674 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 732 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 733 EIVNRASLA 741 >gi|603501|dbj|BAA06454.1| cut3 protein [Schizosaccharomyces pombe] Length = 1324 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 44/115 (38%), Gaps = 12/115 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA---QIG 59 D++ IR N +KR+L+ I ++D++ + E + + +IG Sbjct: 880 DLKSIRNN------NERKRNLQ---NKISNMDKEVEAININNEGLVTEIKTLQDKIMEIG 930 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 S VD L + +K++L + ++ + + + N+ E Sbjct: 931 GIRYRIQKSKVDDLHEQLKFVKDKLNKMSFKKKKNEQRSQSFQVELSNLTSEYDT 985 >gi|4928755|gb|AAD33718.1|AF136711_1 myosin heavy chain [Amoeba proteus] Length = 2138 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 15/100 (15%) Query: 15 DIAL--KKRHLEPQSEYILS-LDEKN----------RILIKKIEDIRARRNSNSAQIGQA 61 AL KR LE + + LDE+ R ++ED AR N+ +A IG+ Sbjct: 1968 REALEEAKRQLERDNNELRDQLDEERVSRGNSERAARKSFAELEDTNARLNALNASIGKL 2027 Query: 62 IAEGNLSLVD--ALKNETSTLKEQLPILEKEEHEVCSSLK 99 + D A K + + L+++ + ++ + ++ Sbjct: 2028 EKAKRRAEADYRASKKQLADLQKKEATEDSLRAQLEAEVR 2067 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNET 77 K+ + QS+ ++ + R +++ ED++A+ + S + A + +D ++ Sbjct: 1568 KKDADRQSQAFAKVENERRSALREYEDLQAQLDETSKNLANADRAKKKLNTDLDEQLSKL 1627 Query: 78 STLKEQLPILEKE 90 LEK Sbjct: 1628 EKASNAQKSLEKR 1640 >gi|324501569|gb|ADY40696.1| JNK-interacting protein [Ascaris suum] Length = 1221 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 54/154 (35%), Gaps = 19/154 (12%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAI 62 I++N E L+ ++ +L+ LI +++++ + ++ +I + + Sbjct: 367 NLIKENTEL----LETKN---------ALNIVKNDLIARVDELSSEQDILREEIRSLEMV 413 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEK---EEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + L+ E LKE++ + E+ + + + V +E Sbjct: 414 RTKMSERIKELETEVRELKEKIEAKSEEDGEDVPMAQRKRFTRLEMARVLMERNQYKERL 473 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 E + A ++ H G+ DF Sbjct: 474 MELQDAMKWTEMQRAKRMNAMHASKKG-GGIWDF 506 >gi|282883093|ref|ZP_06291693.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B] gi|281297070|gb|EFA89566.1| proline--tRNA ligase [Peptoniphilus lacrimalis 315-B] Length = 570 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSV 407 E+ + G S+ +N+ Y D N K+ ++ + GS G+ + R + AI+E + +G + Sbjct: 407 EVGNIFQLGTKYSKSLNATYLDRNGKA-QYFYM--GSYGIGITRTVAAIVEQNYDENG-I 462 Query: 408 TIPTVLRPYMNNLAVIKKEH 427 P PY + VI + Sbjct: 463 IWPVATAPYECIVTVINPNN 482 >gi|242786990|ref|XP_002480914.1| hypothetical protein TSTA_037010 [Talaromyces stipitatus ATCC 10500] gi|218721061|gb|EED20480.1| hypothetical protein TSTA_037010 [Talaromyces stipitatus ATCC 10500] Length = 295 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 15/161 (9%) Query: 8 RQNPEHLD-IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 R++ +D + KR ++ +E +L+++N+ L ++ ++ G+ + + Sbjct: 130 REDSNVVDFQSRIKRFVKEVTEPYEALEQENKRLNQESHQLKK---------GKEQLQKD 180 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + K + KEQL +++ + L+ I + E++ + Sbjct: 181 KEQLQKDKEQLQKDKEQLQKDKEQLQKDKKQLQLQIQYLRRQIDEQMR---RNILKCALC 237 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVL 167 S L H L D + G Sbjct: 238 HRTFNESWKFLGCGHTLC--QTCLEDIESKGLGFGYPCPYP 276 >gi|871048|emb|CAA56212.1| HPSR2 - heavy chain potential motor protein [Giardia intestinalis] gi|1583267|prf||2120344A nucleotide-binding head stalk protein Length = 1620 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 4/93 (4%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 L R + + + I L+ + R KK + I + +AL Sbjct: 1376 FKDNLA-RTTKLKDDEIRDLEAQLRDTKKKSQTALNENTQLIDSIQVKMDSVKQESAEAL 1434 Query: 74 KNETS---TLKEQLPILEKEEHEVCSSLKKLIS 103 K +++ LK +L +E I Sbjct: 1435 KKKSAKIEELKAELSHTLEEHSTFAMKKDAEIQ 1467 >gi|159113503|ref|XP_001706978.1| Nucleotide-binding head-stalk protein, putative [Giardia lamblia ATCC 50803] gi|157435079|gb|EDO79304.1| Nucleotide-binding head-stalk protein, putative [Giardia lamblia ATCC 50803] Length = 1620 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 4/93 (4%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 L R + + + I L+ + R KK + I + +AL Sbjct: 1376 FKDNLA-RTTKLKDDEIRDLEAQLRDTKKKSQTALNENTQLIDSIQVKMDSVKQESAEAL 1434 Query: 74 KNETS---TLKEQLPILEKEEHEVCSSLKKLIS 103 K +++ LK +L +E I Sbjct: 1435 KKKSAKIEELKAELSHTLEEHSTFAMKKDAEIQ 1467 >gi|324501711|gb|ADY40759.1| JNK-interacting protein [Ascaris suum] Length = 1198 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 54/154 (35%), Gaps = 19/154 (12%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAI 62 I++N E L+ ++ +L+ LI +++++ + ++ +I + + Sbjct: 335 NLIKENTEL----LETKN---------ALNIVKNDLIARVDELSSEQDILREEIRSLEMV 381 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEK---EEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + L+ E LKE++ + E+ + + + V +E Sbjct: 382 RTKMSERIKELETEVRELKEKIEAKSEEDGEDVPMAQRKRFTRLEMARVLMERNQYKERL 441 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 E + A ++ H G+ DF Sbjct: 442 MELQDAMKWTEMQRAKRMNAMHASKKG-GGIWDF 474 >gi|304310423|ref|YP_003810021.1| GGDEF precursor [gamma proteobacterium HdN1] gi|301796156|emb|CBL44362.1| GGDEF precursor [gamma proteobacterium HdN1] Length = 664 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 25/224 (11%), Positives = 64/224 (28%), Gaps = 12/224 (5%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 +L+ + + + E ++ +N+ A+ + + ++ E Sbjct: 409 ALENERIARLAQAEALQQEKNA-------RKAQEKALEHERDARKAQDKAIEIQRAANET 461 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 E + I N LEE R + + + S ++ +L L+ Sbjct: 462 LEHRVKERTHELEIANKQLEEQSYTDGLTGIRNRRYLDQFLAREFASARREKLPLSLLLI 521 Query: 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSE-HGYTEVSAPLLVRDEAMYGTG 210 D D + + ++ + + T Y +L+ G Sbjct: 522 DIDHFKQFNDKYGHLVGDDCLRIVGTTINSTVRRETDIVARYGGEEFCVLLPSTDQAGAV 581 Query: 211 Q----IPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSL 250 Q I + D+ + + + T + + + + Sbjct: 582 QVAETIRRRVHDIEFCVNNQNVTITVSLGVATRTPERHHDIEHF 625 >gi|209878248|ref|XP_002140565.1| kinesin motor domain-containing protein [Cryptosporidium muris RN66] gi|209556171|gb|EEA06216.1| kinesin motor domain-containing protein [Cryptosporidium muris RN66] Length = 768 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 26/226 (11%), Positives = 73/226 (32%), Gaps = 10/226 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ ++ + L+ + + + LDE + L +K E+I + S +I Sbjct: 416 LDIESSNKDDDLNKFKLRSTGEDDGIDSSSELDELDEARQQLKQKSEEISQLQQKLS-EI 474 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 I + + + L + + + +L + ++ + +++L ++ + Sbjct: 475 SDIIKQISDDK-ENLNMKLNDITNELNQSKYQQQDQNEKIQQLQLTNKSLVNDLEQSHIQ 533 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + K + I + E + +D +S + + + ++ E Sbjct: 534 RQKLEQQIDSLKACTTISSNNEDLTNKLSNSDLD-----NVSNMKSNCILNLTSNNEHNS 588 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTD 224 + + DE T + +++ Sbjct: 589 SLTQTLKDEISLLRQHLLTNCIDEDEKKERTILLNAIDENIAKIAH 634 >gi|169599717|ref|XP_001793281.1| hypothetical protein SNOG_02682 [Phaeosphaeria nodorum SN15] gi|160705304|gb|EAT89413.2| hypothetical protein SNOG_02682 [Phaeosphaeria nodorum SN15] Length = 7045 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 54/166 (32%), Gaps = 19/166 (11%) Query: 13 HLDIALKKRHLEPQSEY----ILS----LDEKNRILIKKIEDIRARRNSNSA-------- 56 A R+L + + S + ++ + +++E +R + + Sbjct: 6606 EAAEAQANRNLANDTNERYAQLQSEGQLVHQQWQTTQRELEQLRTQHQQLTRGVEDAVRD 6665 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +IG A+ + + +D L + + KEQ+ L+K+ + ++ + Sbjct: 6666 EIGIAL-DERNAEIDRLNTDLTEAKEQIKTLQKQILSAKKPSESFLTIRDEDYFDSA--C 6722 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGA 162 +++ + + + A +D K+ Sbjct: 6723 QQLCQHVQQWVLRFSKFSDTRPCKLSSEIAADTRLDTATRQKIDTR 6768 >gi|167040353|ref|YP_001663338.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X514] gi|300914437|ref|ZP_07131753.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X561] gi|307724327|ref|YP_003904078.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X513] gi|166854593|gb|ABY93002.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X514] gi|300889372|gb|EFK84518.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X561] gi|307581388|gb|ADN54787.1| chromosome segregation protein SMC [Thermoanaerobacter sp. X513] Length = 1196 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 34/110 (30%), Gaps = 11/110 (10%) Query: 2 LDIQWIRQNPEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ RQ + + K+++++ ++L L +I ++ I Sbjct: 837 HNLKDKRQEFDREKNNIVEKEKNIKEIESLKVNLSLDREKLQGEIYKLQQEVKKIQKDIS 896 Query: 60 QAIA---------EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + L+ E + + E+ +E E + Sbjct: 897 SLEDNIFQEEEDLQKRKEKFSILQQEFTNINEEFHKVEMEMQRFQIEIDN 946 >gi|18414212|ref|NP_567431.1| basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] gi|75300963|sp|Q8L467|BH104_ARATH RecName: Full=Transcription factor bHLH104; AltName: Full=Basic helix-loop-helix protein 104; Short=AtbHLH104; Short=bHLH 104; AltName: Full=Transcription factor EN 136; AltName: Full=bHLH transcription factor bHLH104 gi|20856629|gb|AAM26676.1| AT4g14410/dl3245w [Arabidopsis thaliana] gi|21593632|gb|AAM65599.1| unknown [Arabidopsis thaliana] gi|22137100|gb|AAM91395.1| At4g14410/dl3245w [Arabidopsis thaliana] gi|332658041|gb|AEE83441.1| transcription factor bHLH104 [Arabidopsis thaliana] Length = 283 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + L L+E N+ L+++I+ ++A +N + A+ + LK+ T+ +P + Sbjct: 183 DEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTE-QQLKSMTAPSSGFIPHI 241 Query: 88 EKEEHEVCSSLKKLISCIPNVP 109 + ++ +P Sbjct: 242 PAAFNHNKMAVYPSYGYMPMWH 263 >gi|81882390|sp|Q569L8|CENPJ_MOUSE RecName: Full=Centromere protein J; Short=CENP-J gi|62201461|gb|AAH92399.1| Centromere protein J [Mus musculus] Length = 1344 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLD--EKNRILIKKIEDIRARRNSNSAQIGQAI-- 62 +R E L+K + + + L E+ R ++ ++ R A Sbjct: 929 LRIERESALEKLRKEIADFEQQKARELARIEEYRK--EETRKLQKERKVFEKYTAAARTF 986 Query: 63 -AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 + + ALK + + L+E L E + S L+ I + Sbjct: 987 PDKKEREEIQALKQQIADLQEDLKRKETKWSSTQSRLRSQIEML 1030 >gi|326536862|ref|YP_004306116.1| putative phage tail tape measure protein [Clostridium phage phiCD6356] gi|300835470|gb|ADK37877.1| putative phage tail tape measure protein [Clostridium phage phiCD6356] Length = 1733 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 56/179 (31%), Gaps = 12/179 (6%) Query: 3 DIQWIRQNPEHL----DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS--- 55 DI+ + + L ALKK + + + + IK+ ++R + Sbjct: 1345 DIKLFNKQIDELSKQEKAALKKVKGNAK-DALKEEYAAKKEKIKEAIELRKEQKEKEVEQ 1403 Query: 56 -AQIGQAIAE---GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 +I + E L + L + + KE+++ K+ L+ Sbjct: 1404 LKEIANSAKEQLNKELQDRQEFVKKVDDLTKAIVDALKEKYKQEYEAKQASIKKELEALD 1463 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGH 170 + N + + K + E E + D + K+ + ++ H Sbjct: 1464 RWKEESIDRINSVYDAKIKAIDNELEAFEKAEKEKDRLEQDKEELNKIEEIKTAIKFEH 1522 >gi|225543405|ref|NP_001014996.2| centromere protein J [Mus musculus] Length = 1344 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLD--EKNRILIKKIEDIRARRNSNSAQIGQAI-- 62 +R E L+K + + + L E+ R ++ ++ R A Sbjct: 929 LRIERESALEKLRKEIADFEQQKARELARIEEYRK--EETRKLQKERKVFEKYTAAARTF 986 Query: 63 -AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 + + ALK + + L+E L E + S L+ I + Sbjct: 987 PDKKEREEIQALKQQIADLQEDLKRKETKWSSTQSRLRSQIEML 1030 >gi|224070444|ref|XP_002191460.1| PREDICTED: similar to unc-84 homolog A (C. elegans) [Taeniopygia guttata] Length = 869 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 41/87 (47%), Gaps = 4/87 (4%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I I+ + LK + +E +++ L+L +K+ + I+ +ED+ ++ S I + Sbjct: 491 INLIKN---VMSQDLKDKKVEEKTD-FLALHKKHELRIQTLEDLLRELSAESKDIQKEFD 546 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKE 90 V L ++ L+ +L ++ + Sbjct: 547 LAKSKSVSLLMSKIKELELELASMKSK 573 >gi|148704249|gb|EDL36196.1| centromere protein J, isoform CRA_b [Mus musculus] Length = 1339 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 7/104 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLD--EKNRILIKKIEDIRARRNSNSAQIGQAI-- 62 +R E L+K + + + L E+ R ++ ++ R A Sbjct: 924 LRIERESALEKLRKEIADFEQQKARELARIEEYRK--EETRKLQKERKVFEKYTAAARTF 981 Query: 63 -AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 + + ALK + + L+E L E + S L+ I + Sbjct: 982 PDKKEREEIQALKQQIADLQEDLKRKETKWSSTQSRLRSQIEML 1025 >gi|50286051|ref|XP_445454.1| hypothetical protein [Candida glabrata CBS 138] gi|49524759|emb|CAG58365.1| unnamed protein product [Candida glabrata] Length = 1980 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 9/92 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIA---------EGNLSLVDALKNETSTLKE 82 LD + L E + + N ++ I + EG+ S + LK E + LK Sbjct: 1032 KLDTERERLQTLTESYKEKLNEANSSIDEKNKDLNNIQQQIEGSQSEISTLKAEITQLKT 1091 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 L + + ++ + I + E + Sbjct: 1092 SLNEEKSTRKALEKLKEENETYIQSAQDELLQ 1123 >gi|313226372|emb|CBY21516.1| unnamed protein product [Oikopleura dioica] Length = 1106 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 57/139 (41%), Gaps = 8/139 (5%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN------ETSTL 80 S+ I+ L+ +NR L++ + + + ++ + + E L +AL++ E L Sbjct: 681 SDKIVELEIENRQLLEDNDGLGHQI-EIGKEMLKKLREEKSELQNALEHAKKSDPEVEEL 739 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPL-EEVPIGTSANENILIRSVGKKPSAIHLSR 139 K+QL I + + + +KL + + + E+ + + ++ + + + + Sbjct: 740 KKQLEIYKSDLTSMEMECQKLNASLADAIRKEKELVYNLYQQTNSMQDIQSQRDELQKTV 799 Query: 140 EHFEIGEALGLMDFDRATK 158 + E D + + Sbjct: 800 DTLEKRIQQLECDLETSEN 818 >gi|311031629|ref|ZP_07709719.1| hypothetical protein Bm3-1_13956 [Bacillus sp. m3-13] Length = 329 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 18/100 (18%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSN 54 D + + +NP+ + + + L+ + ILS+D I I+ +++ + Sbjct: 189 DHKKVLENPDMISQTVLSKGLDAGTAFEILSID------IADIDIGKNIGAELQTDQAEA 242 Query: 55 SAQIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 +I QA AE ++ ++ ++ ++ E E Sbjct: 243 DKKIAQAKAEERRAMAVAQEQEMRARVEEMRAKVVEAEAE 282 >gi|296451381|ref|ZP_06893119.1| major facilitator family transporter [Clostridium difficile NAP08] gi|296880269|ref|ZP_06904234.1| major facilitator family transporter [Clostridium difficile NAP07] gi|296259797|gb|EFH06654.1| major facilitator family transporter [Clostridium difficile NAP08] gi|296428712|gb|EFH14594.1| major facilitator family transporter [Clostridium difficile NAP07] Length = 834 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 I L + L K++ +A++N S ++ +++ L L N + K+ L+ Sbjct: 692 QIQKLKKTRNELNAKLQKNKAQKNELSKKL-KSMESQKKELQSKLNNSINQKKDMEKSLD 750 Query: 89 KEEHEVC 95 + + Sbjct: 751 TMQQQKK 757 >gi|237734398|ref|ZP_04564879.1| glycyl-tRNA synthetase [Mollicutes bacterium D7] gi|229382628|gb|EEO32719.1| glycyl-tRNA synthetase [Coprobacillus sp. D7] Length = 457 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 30/260 (11%), Positives = 73/260 (28%), Gaps = 18/260 (6%) Query: 95 CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFD 154 E + + V + + + + Sbjct: 41 EMKNNIKQLWWKRFIQESPYNVGLDSAIFMNPRVWEASGHVGGFSDPLIDCKECKTRHRA 100 Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ-IP 213 + G + +++ D + + + + + + M+ T + Sbjct: 101 DKLIEAYDPSVHSEGWSS---EETVKYIKDHNIVCPNCGKSNFTDVRQFKLMFETQMGVV 157 Query: 214 KFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTR 273 + A D+ T++ N + + K +P + +FR+E Sbjct: 158 EDAKDVVYLRPE-----TAQGIFVNFKNIQRTSRKKVPFGIGQIGKAFRNEI----TPGN 208 Query: 274 GMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFS 330 + R +F + EL + + + S ++ L L L + R +L F Sbjct: 209 FIFRMREFEQMELEFFCKPDTDLEWFDYWKSYCQKFLFDLGLKEENLRFRDHEKEELSFY 268 Query: 331 ACKTYDLEVWLAGQNLYREI 350 + T D+E + E+ Sbjct: 269 SKATCDVEYNFPF--GWGEL 286 >gi|255692798|ref|ZP_05416473.1| ATP-dependent chaperone protein ClpB [Bacteroides finegoldii DSM 17565] gi|260621516|gb|EEX44387.1| ATP-dependent chaperone protein ClpB [Bacteroides finegoldii DSM 17565] Length = 862 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 28 EYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA-------IAEGNLSLVDALKNETST 79 + + L DE L +++ + + S +I Q E + ++ + E + Sbjct: 386 DKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIEREAIKRENDKPKLEIIGKELAE 445 Query: 80 LKEQLPILEKEEHEVCSSLKKLISC 104 LKEQ + + + + K+ Sbjct: 446 LKEQEKSFKAKWQSEKTLMDKIQQN 470 >gi|255655393|ref|ZP_05400802.1| putative transporter [Clostridium difficile QCD-23m63] Length = 830 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 I L + L K++ +A++N S ++ +++ L L N + K+ L+ Sbjct: 688 QIQKLKKTRNELNAKLQKNKAQKNELSKKL-KSMESQKKELQSKLNNSINQKKDMEKSLD 746 Query: 89 KEEHEVC 95 + + Sbjct: 747 TMQQQKK 753 >gi|225851450|ref|YP_002731684.1| chromosome segregation protein SMC [Persephonella marina EX-H1] gi|225645745|gb|ACO03931.1| chromosome segregation protein SMC [Persephonella marina EX-H1] Length = 1162 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 17/119 (14%) Query: 7 IRQNPEHLDIALK--KRHLEPQSEYILSLDEKNRILIKKI----------EDIRARRNSN 54 I + + + LK R E + + +LSL+E+ + L +K+ E + +N Sbjct: 315 IEKEIQSIKENLKELAREKEEKIKEVLSLEEQIKELKRKLPEIKKELEKAEAVLEEKNRK 374 Query: 55 SA--QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 +IG + A+ +L V+ E +LK++ L+KE+ + + +++ I E Sbjct: 375 LKEIEIGGSRAKLDLGEVE---KEEKSLKDRQSSLQKEKIHIEMEINRILEKIEEYHNE 430 >gi|224051737|ref|XP_002200312.1| PREDICTED: similar to cytoplasmic dynein 1 heavy chain 1 [Taeniopygia guttata] Length = 4724 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3284 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3338 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3339 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3398 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3399 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYLSNPSYNY 3457 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3458 EIVNRASLA 3466 >gi|255545966|ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis] gi|223547129|gb|EEF48626.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis] Length = 1290 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 11/80 (13%) Query: 15 DIALKKRHLEPQS--------EYILSLDEKNRILIKKIEDIR---ARRNSNSAQIGQAIA 63 A KR + + + L+++ R L K+IED+R + +S S Q + Sbjct: 579 KEAEMKRFTSVDTSVLKQHYEKKVQELEQEKRALQKEIEDLRCNLSNISSISDDGAQKLK 638 Query: 64 EGNLSLVDALKNETSTLKEQ 83 E L + L+++ + LK++ Sbjct: 639 ENYLQKLTVLESQVAELKKK 658 >gi|241854647|ref|XP_002415967.1| CDC42 binding protein kinase alpha, putative [Ixodes scapularis] gi|215510181|gb|EEC19634.1| CDC42 binding protein kinase alpha, putative [Ixodes scapularis] Length = 820 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 53/134 (39%), Gaps = 15/134 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYIL-----SLDEKNRILIKKIEDIRARR----N 52 LD++ E +++ + + +L L+ NR +++E ++ Sbjct: 476 LDMK------EEFAREQQQKKFDQELTTLLRDYDNDLEALNRTQKQQVEKAEQQQELDLK 529 Query: 53 SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 S +I S ++LKNE LK+++ ++ KE+ + ++K + E Sbjct: 530 YASRRIRAEQERELKSFRESLKNEAKLLKQEVELMPKEKRKDMFRVRKEKMDLDQAERER 589 Query: 113 VPIGTSANENILIR 126 + + ++ L Sbjct: 590 LFVEKLNEQHELSM 603 >gi|194209738|ref|XP_001498399.2| PREDICTED: similar to nuclear factor (erythroid-derived 2)-like 3 [Equus caballus] Length = 660 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N ++R ++ IL+L+E L K E ++ R + I Sbjct: 538 IRDIRRRGKNK-VAAQNCRRRKMDI----ILNLEEDVCNLQAKKETLKRERAQCNKAINI 592 Query: 61 AIAE 64 + Sbjct: 593 MKQK 596 >gi|164656833|ref|XP_001729543.1| hypothetical protein MGL_3087 [Malassezia globosa CBS 7966] gi|159103436|gb|EDP42329.1| hypothetical protein MGL_3087 [Malassezia globosa CBS 7966] Length = 740 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 7/55 (12%), Positives = 23/55 (41%) Query: 26 QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 +E D+ R++I++ ++ + S +G+ + + + ++ L Sbjct: 627 DAEQHAEADKARRVVIEEANRAQSVASETSKAMGEFKDQIDKEEAEKVQKLVEEL 681 >gi|145481645|ref|XP_001426845.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393922|emb|CAK59447.1| unnamed protein product [Paramecium tetraurelia] Length = 518 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 62/152 (40%), Gaps = 4/152 (2%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA-EGNL 67 QN + + ++ ++++ E +++ + NR L K+ D++ + N A I Q + + Sbjct: 369 QNEQPIKEKIEGKNVKYNDE--ITIRQYNRHLQLKVNDLQQQLNQKEALIDQLKKAQQDQ 426 Query: 68 SLVDALKNET-STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 +K ++ + +KE+ K E + + L + N + +++L Sbjct: 427 QQTSRMKTKSNNEIKEKDECEFKLELLHQAEINSLKNETQNQLKVVELKWKNKTKDLLFE 486 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 K ++ + + L + +R TK Sbjct: 487 LENKDRQIDQYRQQLEALMKELEWVKTERRTK 518 >gi|291520560|emb|CBK75781.1| glycyl-tRNA synthetase, dimeric type [Butyrivibrio fibrisolvens 16/4] Length = 397 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 107 TAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 162 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L D L F + T D+E + Sbjct: 163 KPGSQDEWFQYWRGFCRDWLLSLGMKEDEMRLRDHDPEELSFYSTGTTDIEFLFPF--GW 220 Query: 348 REISSCSTCGNF 359 E+ ++ ++ Sbjct: 221 GELWGIASRTDY 232 >gi|194749411|ref|XP_001957132.1| GF10267 [Drosophila ananassae] gi|190624414|gb|EDV39938.1| GF10267 [Drosophila ananassae] Length = 1161 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 16/101 (15%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIED-------IRARRNSNSAQIGQAIAEGNL 67 LKKR E E ++ +E+ L ++ E+ + A R + Sbjct: 326 QEQLKKRKEEE--ERLMKAEEERIRLAEEREEARLTALRLEAERKE-------KKKQREA 376 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 LK E L ++ + SLK IP+ Sbjct: 377 ERKARLKAEGKLLTKKQKEDRARAQALLESLKAQGLEIPDP 417 >gi|123471773|ref|XP_001319084.1| mitochondrial-type HSP70 [Trichomonas vaginalis G3] gi|121901859|gb|EAY06861.1| mitochondrial-type HSP70, putative [Trichomonas vaginalis G3] Length = 626 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 27/63 (42%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 D+K R +++K + N I + + L+ +++ LK+ + ++++ E Sbjct: 543 DKKKREILEKKYAMEQYINEIEKTISENEKKLPADLLKRIRDSVKDLKDAIAGNDEKKIE 602 Query: 94 VCS 96 Sbjct: 603 EKY 605 >gi|301056404|ref|YP_003794615.1| glycyl-tRNA synthetase [Bacillus anthracis CI] gi|300378573|gb|ADK07477.1| glycyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 458 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 228 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|291410977|ref|XP_002721753.1| PREDICTED: cytoplasmic dynein 1 heavy chain 1 [Oryctolagus cuniculus] Length = 4610 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3170 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3224 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3225 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3284 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3285 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3343 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3344 EIVNRASLA 3352 >gi|290980412|ref|XP_002672926.1| kinesin [Naegleria gruberi] gi|284086506|gb|EFC40182.1| kinesin [Naegleria gruberi] Length = 1080 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 +K++ E + + + + + ++ ++I+++ +I + ++ V+ L+ E + Sbjct: 744 RKKNTEMEISKMKAQETE-KMHKEQIQNLETELKKLKEEISK-KQSTDMEQVEQLRKEIT 801 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 TLK+ L+++ ++ ++ Sbjct: 802 TLKDAEENLKEQMKKLEQEKDEVYQKYK 829 >gi|148686723|gb|EDL18670.1| dynein cytoplasmic 1 heavy chain 1, isoform CRA_a [Mus musculus] Length = 4605 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3165 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3219 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3220 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3279 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3280 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3338 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3339 EIVNRASLA 3347 >gi|148686724|gb|EDL18671.1| dynein cytoplasmic 1 heavy chain 1, isoform CRA_b [Mus musculus] Length = 4600 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3160 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3214 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3215 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3274 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3275 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3333 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3334 EIVNRASLA 3342 >gi|118092179|ref|XP_421371.2| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 1 [Gallus gallus] Length = 4617 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3222 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3276 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3277 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3336 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3337 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYLSNPSYNY 3395 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3396 EIVNRASLA 3404 >gi|49480891|ref|YP_035383.1| spore germination protein PC [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196036190|ref|ZP_03103589.1| spore germination protein GerPC [Bacillus cereus W] gi|218902343|ref|YP_002450177.1| spore germination protein GerPC [Bacillus cereus AH820] gi|228913822|ref|ZP_04077447.1| spore germination protein gerPC [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228926285|ref|ZP_04089359.1| spore germination protein gerPC [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228944855|ref|ZP_04107218.1| spore germination protein gerPC [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229090189|ref|ZP_04221437.1| spore germination protein gerPC [Bacillus cereus Rock3-42] gi|301052785|ref|YP_003790996.1| spore germination protein PC [Bacillus anthracis CI] gi|49332447|gb|AAT63093.1| spore germination protein PC [Bacillus thuringiensis serovar konkukian str. 97-27] gi|195991165|gb|EDX55134.1| spore germination protein GerPC [Bacillus cereus W] gi|218534780|gb|ACK87178.1| spore germination protein GerPC [Bacillus cereus AH820] gi|228693125|gb|EEL46838.1| spore germination protein gerPC [Bacillus cereus Rock3-42] gi|228814883|gb|EEM61141.1| spore germination protein gerPC [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228833382|gb|EEM78945.1| spore germination protein gerPC [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228845761|gb|EEM90787.1| spore germination protein gerPC [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300374954|gb|ADK03858.1| spore germination protein PC [Bacillus cereus biovar anthracis str. CI] Length = 204 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 45/146 (30%), Gaps = 3/146 (2%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 IL+L+++ R L +++ +++ N S+ IG+ + + V+ L + E+ Sbjct: 23 ILNLEDQVRQLQEELNELK---NRPSSSIGKVEYKFDQLKVENLNGTLNIGLNPFSTKEQ 79 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + + + L + G + + E + E Sbjct: 80 QIEDFQVDTETLKVNPETDTNPDFYQGILQEMHRYLDEEAYNRILHFEQEERTPLDEMYR 139 Query: 150 LMDFDRATKLSGARFSVLTGHLAHLE 175 M D K R E Sbjct: 140 QMMVDDIKKQMEHRLPYYLSQAQSYE 165 >gi|52144181|ref|YP_082645.1| spore germination protein PC [Bacillus cereus E33L] gi|118476731|ref|YP_893882.1| spore germination protein PC [Bacillus thuringiensis str. Al Hakam] gi|196037496|ref|ZP_03104807.1| spore germination protein GerPC [Bacillus cereus NVH0597-99] gi|196044345|ref|ZP_03111581.1| spore germination protein GerPC [Bacillus cereus 03BB108] gi|225863098|ref|YP_002748476.1| spore germination protein GerPC [Bacillus cereus 03BB102] gi|228932522|ref|ZP_04095403.1| spore germination protein gerPC [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229183449|ref|ZP_04310674.1| spore germination protein gerPC [Bacillus cereus BGSC 6E1] gi|51977650|gb|AAU19200.1| spore germination protein PC [Bacillus cereus E33L] gi|118415956|gb|ABK84375.1| spore germination protein PC [Bacillus thuringiensis str. Al Hakam] gi|196024984|gb|EDX63655.1| spore germination protein GerPC [Bacillus cereus 03BB108] gi|196031738|gb|EDX70334.1| spore germination protein GerPC [Bacillus cereus NVH0597-99] gi|225788292|gb|ACO28509.1| spore germination protein GerPC [Bacillus cereus 03BB102] gi|228600033|gb|EEK57628.1| spore germination protein gerPC [Bacillus cereus BGSC 6E1] gi|228827212|gb|EEM72965.1| spore germination protein gerPC [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 204 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 45/146 (30%), Gaps = 3/146 (2%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 IL+L+++ R L +++ +++ N S+ IG+ + + V+ L + E+ Sbjct: 23 ILNLEDQVRQLQEELNELK---NRPSSSIGKVEYKFDQLKVENLNGTLNIGLNPFSTKEQ 79 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + + + L + G + + E + E Sbjct: 80 QIEDFQVDTETLKVNPETDTNPDFYQGILQEMHRYLDEEAYNRILHFEQEERTPLDEMYR 139 Query: 150 LMDFDRATKLSGARFSVLTGHLAHLE 175 M D K R E Sbjct: 140 QMMVDDIKKQMEHRLPYYLSQAQSYE 165 >gi|50547419|ref|XP_501179.1| YALI0B21384p [Yarrowia lipolytica] gi|49647045|emb|CAG83432.1| YALI0B21384p [Yarrowia lipolytica] Length = 738 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 51/150 (34%), Gaps = 9/150 (6%) Query: 1 MLDI--QWIRQNPE--HLDIAL-KKRHL----EPQSEYILSLDEKNRILIKKIEDIRARR 51 M DI + + + E + L + + S+ LD + L + ++ A + Sbjct: 313 MADIENRLLEKEQELAAVKERLDITKGQLGGGDGDSKLKEELDAVKKELAESKRELEAAK 372 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 N ++Q + G+ ++ +K + + K+QL L+ + SS + E Sbjct: 373 NEVTSQKTLSRDMGDSEELEEVKKQLAETKKQLQELQSVDATDMSSEVADLKKELAQTQE 432 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREH 141 + + + +E Sbjct: 433 MSLNEQDQSMKTIDTLRKQISEMKQQLKEK 462 >gi|71026170|ref|XP_762771.1| hypothetical protein [Theileria parva strain Muguga] gi|68349723|gb|EAN30488.1| hypothetical protein TP03_0647 [Theileria parva] Length = 670 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 54/113 (47%), Gaps = 4/113 (3%) Query: 3 DIQWI-RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 DI I R + + ++L K + ++E +L++ ++N LI + E++ +++ S+++ + Sbjct: 200 DILTIQRDDITDIKLSLVKSNNNAKNEALLAM-QENEKLIAENENLLSKQEKLSSELEEL 258 Query: 62 IAEG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 E L + +L+ + L+ L + K+ + L + + + E Sbjct: 259 KTENEQKLERIKSLQIKVEDLQSDLIVERKQNEHLLKDKVDLQNRLNLLTKEN 311 >gi|302663302|ref|XP_003023295.1| hypothetical protein TRV_02569 [Trichophyton verrucosum HKI 0517] gi|291187285|gb|EFE42677.1| hypothetical protein TRV_02569 [Trichophyton verrucosum HKI 0517] Length = 1461 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 5/97 (5%) Query: 34 DEKNR---ILIKKIEDIRARRNSNSAQI--GQAIAEGNLSLVDALKNETSTLKEQLPILE 88 DE R L ++ E +AR + Q+ G+ + + E + +L Sbjct: 1046 DETRRQEEELAREKEAAQARLKALEEQVRQGKIKKQEQKRRKQQAEQEAREKEAKLAAQR 1105 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 E ++L + ++ EE + Sbjct: 1106 AELEAAQERERELQRQLESLGDEESSSDDEGPGFVTP 1142 >gi|239637623|ref|ZP_04678595.1| glycyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239596841|gb|EEQ79366.1| glycyl-tRNA synthetase [Staphylococcus warneri L37603] Length = 463 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQVGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + LK L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASQWLKDLNISEENMRLRDHDADELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 289 GELWGIASRTDF 300 >gi|149031975|gb|EDL86887.1| type II keratin Kb22 [Rattus norvegicus] Length = 516 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L + IE ++A+R I QA +G +L DA K Sbjct: 325 DNLRNRK-----NEILEMNKLIQRLQQDIETVKAQRCKLEGAIAQAEQQGEAALSDA-KC 378 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 379 KLAGLEEALQKAKQDMACLLKEYQEVM 405 >gi|65316905|ref|ZP_00389864.1| COG0423: Glycyl-tRNA synthetase (class II) [Bacillus anthracis str. A2012] gi|228917544|ref|ZP_04081089.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228936204|ref|ZP_04099004.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228981598|ref|ZP_04141894.1| Glycyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228988159|ref|ZP_04148257.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229124457|ref|ZP_04253644.1| Glycyl-tRNA synthetase [Bacillus cereus 95/8201] gi|229141633|ref|ZP_04270164.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|229158516|ref|ZP_04286576.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|229199064|ref|ZP_04325747.1| Glycyl-tRNA synthetase [Bacillus cereus m1293] gi|228584335|gb|EEK42470.1| Glycyl-tRNA synthetase [Bacillus cereus m1293] gi|228624952|gb|EEK81719.1| Glycyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228641831|gb|EEK98131.1| Glycyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|228659005|gb|EEL14658.1| Glycyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228771570|gb|EEM20038.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228778083|gb|EEM26354.1| Glycyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228823451|gb|EEM69283.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228842111|gb|EEM87213.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 455 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 169 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 224 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 225 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 282 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 283 GELWGVASRTDFDLKR 298 >gi|332019192|gb|EGI59702.1| Myosin heavy chain, non-muscle [Acromyrmex echinatior] Length = 2033 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R L+ +E + L+ R L +++++ + + + + S + K++ Sbjct: 1521 TRELDELNEKVEELERGRRGLQSELDELVNNQGTADKNVHELEKAKRSLESQLQEQKSQV 1580 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIP 106 L+++L E + + +++ L + Sbjct: 1581 EELEDELQFTEDAKLRLEVNMQALRAQFE 1609 >gi|326921052|ref|XP_003206778.1| PREDICTED: cytoplasmic dynein 1 heavy chain 1-like [Meleagris gallopavo] Length = 4571 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3131 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3185 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3186 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3245 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3246 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYLSNPSYNY 3304 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3305 EIVNRASLA 3313 >gi|237756597|ref|ZP_04585115.1| chaperone protein ClpB [Sulfurihydrogenibium yellowstonense SS-5] gi|237691243|gb|EEP60333.1| chaperone protein ClpB [Sulfurihydrogenibium yellowstonense SS-5] Length = 994 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 44/95 (46%), Gaps = 8/95 (8%) Query: 1 MLDIQWIRQNPE-----HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 MLD Q I+ + + + ++K +LE Q + + + R K+E+++ + Sbjct: 558 MLDEQIIQASLDGDYEKEAKLKIEKANLEKQLKDLKAKSSNER---TKLEELQRQLEEIE 614 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 QI +G+ K + + +++++ L+++ Sbjct: 615 KQIEFYSQKGDYEKEAEYKIKKAQIEKEIKALQQK 649 >gi|208779910|ref|ZP_03247254.1| hypothetical protein FTG_0657 [Francisella novicida FTG] gi|208744365|gb|EDZ90665.1| hypothetical protein FTG_0657 [Francisella novicida FTG] Length = 495 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 47/147 (31%), Gaps = 7/147 (4%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNS---AQIGQAIAEGNLSLVDALKNETSTLKEQ 83 + I D K + IE + +RN+ S +I Q + + K E + + Sbjct: 102 VKGIAKYDSKRDEIKATIESLIEKRNNVSGIAKKIRQLKYDHK---IAQKKTELKAINTK 158 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 L IL+ E+ + ++ I+ I N G A N + + V Sbjct: 159 LDILKDIENGDKAYTEEKITQI-NTIKNITVNGFKAYSNDIAKPVLAHLKTAWNYANKLN 217 Query: 144 IGEALGLMDFDRATKLSGARFSVLTGH 170 +D +L+ + Sbjct: 218 YMSYRNNIDIFWNARLALWNNQYYLNN 244 >gi|47228221|emb|CAG07616.1| unnamed protein product [Tetraodon nigroviridis] Length = 3224 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRAR-RNSNSAQI------GQAIAEGNLSLVDAL 73 R+L ++ D K + L K + D + + RN S I + + Sbjct: 2274 RNLNL---RLIDADSKKKALQKNLLDAQNQLRNIRSDDIRDMINEAKRKSASANKTASET 2330 Query: 74 KNETSTLKEQLP 85 ++ S +KE++ Sbjct: 2331 MDKVSAIKEEIS 2342 >gi|320120274|gb|EFE27922.2| proline--tRNA ligase [Filifactor alocis ATCC 35896] Length = 596 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSV 407 E+ + G S +N Y D + KS K GS G+ V R + AI+E + G + Sbjct: 433 EVGNIFQLGTKYSDSLNLTYLDQDGKSKK-VWM--GSHGIGVSRTMAAIIEQNYDEKG-I 488 Query: 408 TIPTVLRPY 416 P V+ PY Sbjct: 489 IWPLVVAPY 497 >gi|293370802|ref|ZP_06617348.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CMC 3f] gi|292634162|gb|EFF52705.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CMC 3f] Length = 862 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 28 EYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA-------IAEGNLSLVDALKNETST 79 + + L DE L +++ + + S +I Q E + ++ + E + Sbjct: 386 DKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIEREAIKRENDKPKLEIIGKELAE 445 Query: 80 LKEQLPILEKEEHEVCSSLKKLISC 104 LKEQ + + + + K+ Sbjct: 446 LKEQEKSFKAKWQSEKTLMDKIQQN 470 >gi|255656627|ref|ZP_05402036.1| hypothetical protein CdifQCD-2_13224 [Clostridium difficile QCD-23m63] gi|296449918|ref|ZP_06891682.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296878299|ref|ZP_06902308.1| conserved hypothetical protein [Clostridium difficile NAP07] gi|296261188|gb|EFH08019.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296430747|gb|EFH16585.1| conserved hypothetical protein [Clostridium difficile NAP07] Length = 232 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 17 ALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 ++ R + + L E+ + L K+ E++++ NS I + N D LK+E Sbjct: 29 NIENRGMTT-FKRGEQLTEELKSLKKEKENLQSEVNSVKKDIETYRGKNNEGEQDILKSE 87 Query: 77 TST 79 Sbjct: 88 IEK 90 >gi|145505501|ref|XP_001438717.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124405889|emb|CAK71320.1| unnamed protein product [Paramecium tetraurelia] Length = 2413 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 7/107 (6%) Query: 3 DIQWI--RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 D + I +N E + + + +L+ + ++ + + L +E++R QI + Sbjct: 1589 DQKQIDELKNIEIVQLNQQIVNLKEKIAFLEQNEIQTSELSSHLENLRQE-----KQIKE 1643 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + D LK E + K Q+ LE++ + +L + Sbjct: 1644 QKEKLFREENDKLKEEINNFKNQINQLERDNITNEQNYHQLQEEMKT 1690 >gi|118088795|ref|XP_419877.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 1176 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 15/93 (16%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVDAL 73 I L+E NR L K E+++ R+ + ++ EG + Sbjct: 340 RIEELEETNRSLQKAEEELQELRDKIAKGECGNSSLMAEVENLRKRVLEMEGKDEEITKT 399 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 +++ LK +L E E+ ++KL + Sbjct: 400 ESQCKELKNKLQEEEHHNKELKLEVEKLQKRMS 432 >gi|73966428|ref|XP_865997.1| PREDICTED: similar to sperm associated antigen 9 isoform 1 isoform 5 [Canis familiaris] Length = 944 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|323704183|ref|ZP_08115762.1| glycyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536249|gb|EGB26021.1| glycyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 462 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 57/194 (29%), Gaps = 13/194 (6%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 L QF+ D + + + + M+ T Q ++ T+ Sbjct: 121 WTNERLKQFIDDNNVPCPVCGAHNFTDIRKFNLMFKTFQGVTED----SKSEIYLRPETA 176 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + K +P + SFR+E R +F + EL + Sbjct: 177 QGIFVNFKNVLRTSRKKIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKP 232 Query: 293 EDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + L L L + R +L + T D+E + E Sbjct: 233 GEDLEWFNYWKEFCMNWLLNLGLRKENLRFRDHSKEELSHYSNATTDIEYRFPF--GWGE 290 Query: 350 ISSCSTCGNFQSRR 363 + + +F RR Sbjct: 291 LWGIADRTDFDLRR 304 >gi|30682847|ref|NP_849383.1| basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] gi|20127109|gb|AAM10963.1|AF488628_1 putative bHLH transcription factor [Arabidopsis thaliana] gi|2244797|emb|CAB10220.1| hypothetical protein [Arabidopsis thaliana] gi|7268146|emb|CAB78483.1| hypothetical protein [Arabidopsis thaliana] gi|332658042|gb|AEE83442.1| transcription factor bHLH104 [Arabidopsis thaliana] Length = 277 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + L L+E N+ L+++I+ ++A +N + A+ + LK+ T+ +P + Sbjct: 177 DEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTE-QQLKSMTAPSSGFIPHI 235 Query: 88 EKEEHEVCSSLKKLISCIPNVP 109 + ++ +P Sbjct: 236 PAAFNHNKMAVYPSYGYMPMWH 257 >gi|118377645|ref|XP_001022000.1| hypothetical protein TTHERM_00564010 [Tetrahymena thermophila] gi|89303767|gb|EAS01755.1| hypothetical protein TTHERM_00564010 [Tetrahymena thermophila SB210] Length = 1167 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 16/142 (11%) Query: 11 PEHLDIALKKRHLEPQSEYILSLD-----EKNRI---------LIKKIEDIRARRNSNSA 56 E + LK R+ E E I SL ++N+ + K++++++ S Sbjct: 198 LEEFNDKLKARNSELDQELIKSLHQIEQVKQNKEQDTNSKLTIIQKELDNLKNHNIQLSK 257 Query: 57 QIGQAIAEGNLSLV--DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + +A + + L N+ +K + KE + L++ + E+ Sbjct: 258 DLSEAKKKVQSEQIQQQELFNQLDEMKRMNNLFLKENDSIKRQLQEAQFRLQAAQEEKEK 317 Query: 115 IGTSANENILIRSVGKKPSAIH 136 I + ++ Sbjct: 318 IEVQFLQLQMVHQNKLHRKDSK 339 >gi|325688976|gb|EGD30984.1| proline--tRNA ligase [Streptococcus sanguinis SK115] Length = 616 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWM 224 >gi|237713473|ref|ZP_04543954.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. D1] gi|262407259|ref|ZP_06083807.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_22] gi|294644668|ref|ZP_06722418.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CC 2a] gi|294809071|ref|ZP_06767793.1| ATP-dependent chaperone protein ClpB [Bacteroides xylanisolvens SD CC 1b] gi|298482679|ref|ZP_07000863.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. D22] gi|229446455|gb|EEO52246.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. D1] gi|262354067|gb|EEZ03159.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_22] gi|292640002|gb|EFF58270.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CC 2a] gi|294443796|gb|EFG12541.1| ATP-dependent chaperone protein ClpB [Bacteroides xylanisolvens SD CC 1b] gi|295087149|emb|CBK68672.1| ATP-dependent chaperone ClpB [Bacteroides xylanisolvens XB1A] gi|298271142|gb|EFI12719.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. D22] Length = 862 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 28 EYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA-------IAEGNLSLVDALKNETST 79 + + L DE L +++ + + S +I Q E + ++ + E + Sbjct: 386 DKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIEREAIKRENDKPKLEIIGKELAE 445 Query: 80 LKEQLPILEKEEHEVCSSLKKLISC 104 LKEQ + + + + K+ Sbjct: 446 LKEQEKSFKAKWQSEKTLMDKIQQN 470 >gi|160887374|ref|ZP_02068377.1| hypothetical protein BACOVA_05393 [Bacteroides ovatus ATCC 8483] gi|237722645|ref|ZP_04553126.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 2_2_4] gi|260171333|ref|ZP_05757745.1| endopeptidase Clp ATP-binding chain B [Bacteroides sp. D2] gi|299148949|ref|ZP_07042011.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 3_1_23] gi|315919644|ref|ZP_07915884.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156107785|gb|EDO09530.1| hypothetical protein BACOVA_05393 [Bacteroides ovatus ATCC 8483] gi|229448455|gb|EEO54246.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 2_2_4] gi|298513710|gb|EFI37597.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 3_1_23] gi|313693519|gb|EFS30354.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 862 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 28 EYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA-------IAEGNLSLVDALKNETST 79 + + L DE L +++ + + S +I Q E + ++ + E + Sbjct: 386 DKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIEREAIKRENDKPKLEIIGKELAE 445 Query: 80 LKEQLPILEKEEHEVCSSLKKLISC 104 LKEQ + + + + K+ Sbjct: 446 LKEQEKSFKAKWQSEKTLMDKIQQN 470 >gi|73966430|ref|XP_866012.1| PREDICTED: similar to sperm associated antigen 9 isoform 1 isoform 6 [Canis familiaris] Length = 930 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|74205753|dbj|BAE23196.1| unnamed protein product [Mus musculus] Length = 646 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L K E ++ + S I Sbjct: 542 IRDIRRRGKNK-VAAQNCRKRKLDI----ILNLEDDICNLQAKKEALKNEQTQCSKAIDI 596 Query: 61 AIAE 64 + Sbjct: 597 MRQK 600 >gi|74202333|dbj|BAE23511.1| unnamed protein product [Mus musculus] Length = 654 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L K E ++ + S I Sbjct: 542 IRDIRRRGKNK-VAAQNCRKRKLDI----ILNLEDDICNLQAKKEALKNEQTQCSKAIDI 596 Query: 61 AIAE 64 + Sbjct: 597 MRQK 600 >gi|326407970|gb|ADZ65038.1| replication-associated protein RepX [Lactococcus lactis subsp. lactis CV56] Length = 253 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 13/96 (13%) Query: 18 LKKRHLEPQSEYILSL-DEKNRILIKK---IEDIRARRNSNS--AQIGQAIAEGN----- 66 L KR +E + + L D++ R+ ++ +E+ +A N Q E Sbjct: 159 LVKRGVE--IDKLHELLDQQQRLALQDKKLLEEYKAEINDLKALKMPSQDTKEEQANSQP 216 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 +D LK + L +++ E+ ++ + Sbjct: 217 QEELDTLKEQIKALNDKIKGQEELNNQSSKKWYQFW 252 >gi|118097738|ref|XP_414757.2| PREDICTED: similar to unc-84 homolog A (C. elegans) [Gallus gallus] Length = 856 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 58/161 (36%), Gaps = 14/161 (8%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR----ARRNSNSAQ-- 57 ++ I+ +D LK + LE +++ L+L +++ + I +ED+ A + Sbjct: 473 LKLIKN---VMDQHLKDKRLEEKTD-FLALHQEHNLRIITLEDLLRKLSAESKDIQKELE 528 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 I +A + + L + L+ +L ++ E S +V E + Sbjct: 529 IAKAKTIRDGDEHNQLLSRVKKLELELSQVKSELLTGESVKTSCEKI--DVIHE--KVDA 584 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 E++ + G + S + + D + Sbjct: 585 QVKESVKMMLFGDQHKDFPESLLQWLTSNFVTRSDLQTLLQ 625 >gi|119115237|ref|XP_310961.3| AGAP000175-PA [Anopheles gambiae str. PEST] gi|116130739|gb|EAA06485.3| AGAP000175-PA [Anopheles gambiae str. PEST] Length = 476 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 10/118 (8%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS------- 68 + R + E +L + + + K++E R + + + + Sbjct: 221 AKIHIRRMAKDVEGLLKAEVALKEMQKELEQARIEQENVGKEKMDLERRLREAPTLSSSS 280 Query: 69 ---LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 + LK E L+ +L E E H+ C + + + + E + Sbjct: 281 SDLELQQLKQEIEVLRSELNRAEVEIHDHCWTPPQGLQSWLQLTYELENKHHIRKRIM 338 >gi|295111084|emb|CBL27834.1| prolyl-tRNA synthetase [Synergistetes bacterium SGP1] Length = 479 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 29/194 (14%) Query: 228 LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 + PTSE + ++YS I + LP+ R E + R LR +F E Sbjct: 106 VRPTSETVIGHMYSRWIQSWRDLPVLINQWCNVMRWE-----KRPRLFLRTSEFLWQEGH 160 Query: 288 --SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQN 345 T +E + + + + L L G+ A TY E ++ Sbjct: 161 TAHATEQEAREETLRMLEVYRKVMEEELALPVITGEKTAGERFPGAVATYTCEAMMSDAK 220 Query: 346 LYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAV---------GRCLIAI 396 + +S NF +R R++D + + +A R + AI Sbjct: 221 ALQAGTSHFLGQNF-ARAFEIRFQDRDGE------------LATCWTTSWGISTRLIGAI 267 Query: 397 LENYLNADGSVTIP 410 + + + DG V P Sbjct: 268 IMTHSDDDGLVLPP 281 >gi|254519216|ref|ZP_05131272.1| chromosome segregation protein SMC [Clostridium sp. 7_2_43FAA] gi|226912965|gb|EEH98166.1| chromosome segregation protein SMC [Clostridium sp. 7_2_43FAA] Length = 1187 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 21/101 (20%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA-------RRNSNSAQIGQA 61 +N E +K E ++ D ++E + +N ++ + Sbjct: 302 KNIEIFKERIKN------LEEVIKRDS------SEVEALENSLKISIEEKNLLGKELEEK 349 Query: 62 IAE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 I E + + L+ E L ++ LE + + Sbjct: 350 IKEQLQRENDIKRLEKEVQDLNREIKELENKIQHFKDEEFE 390 >gi|28268805|dbj|BAC56912.1| kinesin-related protein K4 [Dictyostelium discoideum] Length = 1885 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 30/74 (40%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 + + K+ LE E ++D K + I+ + I++ + S +I + + K Sbjct: 1186 EKDMIKKELEKLREKFNAIDAKLKQAIQDKQTIQSEKQSLEREIKDLKRSHTSTETELDK 1245 Query: 75 NETSTLKEQLPILE 88 + + L + + Sbjct: 1246 LKKTHLAADVKSKD 1259 >gi|30264956|ref|NP_847333.1| glycyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|42784099|ref|NP_981346.1| glycyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|47530451|ref|YP_021800.1| glycyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|47566949|ref|ZP_00237666.1| glycyl-tRNA synthetase [Bacillus cereus G9241] gi|49187774|ref|YP_031027.1| glycyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|52140610|ref|YP_086219.1| glycyl-tRNA synthetase [Bacillus cereus E33L] gi|118480007|ref|YP_897158.1| glycyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|165870894|ref|ZP_02215546.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167634943|ref|ZP_02393261.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167639989|ref|ZP_02398257.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170685642|ref|ZP_02876865.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170707043|ref|ZP_02897500.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177652334|ref|ZP_02934837.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190567164|ref|ZP_03020079.1| glycyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|196032884|ref|ZP_03100297.1| glycyl-tRNA synthetase [Bacillus cereus W] gi|196040501|ref|ZP_03107801.1| glycine--tRNA ligase [Bacillus cereus NVH0597-99] gi|196044021|ref|ZP_03111258.1| glycyl-tRNA synthetase [Bacillus cereus 03BB108] gi|206976453|ref|ZP_03237360.1| glycyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217962381|ref|YP_002340953.1| glycyl-tRNA synthetase [Bacillus cereus AH187] gi|218906113|ref|YP_002453947.1| glycyl-tRNA synthetase [Bacillus cereus AH820] gi|222098368|ref|YP_002532426.1| glycyl-tRNA synthetase [Bacillus cereus Q1] gi|225866890|ref|YP_002752268.1| glycyl-tRNA synthetase [Bacillus cereus 03BB102] gi|227817684|ref|YP_002817693.1| glycyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|228929941|ref|ZP_04092954.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228942077|ref|ZP_04104618.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228948637|ref|ZP_04110915.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228975007|ref|ZP_04135567.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|229187155|ref|ZP_04314301.1| Glycyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|229602508|ref|YP_002869159.1| glycine--tRNA ligase [Bacillus anthracis str. A0248] gi|254687247|ref|ZP_05151104.1| glycyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254725260|ref|ZP_05187043.1| glycyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254735416|ref|ZP_05193124.1| glycyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254740683|ref|ZP_05198374.1| glycyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254753055|ref|ZP_05205091.1| glycyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254761397|ref|ZP_05213418.1| glycyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|300117973|ref|ZP_07055730.1| glycyl-tRNA synthetase [Bacillus cereus SJ1] gi|59798501|sp|Q632E8|SYG_BACCZ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|59798563|sp|Q72YG8|SYG_BACC1 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|59798583|sp|Q81XT3|SYG_BACAN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|30259633|gb|AAP28819.1| glycine--tRNA ligase [Bacillus anthracis str. Ames] gi|42740030|gb|AAS43954.1| glycyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|47505599|gb|AAT34275.1| glycyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|47556267|gb|EAL14601.1| glycyl-tRNA synthetase [Bacillus cereus G9241] gi|49181701|gb|AAT57077.1| glycyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|51974079|gb|AAU15629.1| glycine--tRNA ligase (glycyl-tRNA synthetase) [Bacillus cereus E33L] gi|118419232|gb|ABK87651.1| glycyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|164713403|gb|EDR18928.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167512070|gb|EDR87448.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167529693|gb|EDR92442.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170128146|gb|EDS97016.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170670106|gb|EDT20846.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172082340|gb|EDT67406.1| glycyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190561668|gb|EDV15638.1| glycyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|195994313|gb|EDX58268.1| glycyl-tRNA synthetase [Bacillus cereus W] gi|196025357|gb|EDX64027.1| glycyl-tRNA synthetase [Bacillus cereus 03BB108] gi|196028633|gb|EDX67240.1| glycine--tRNA ligase [Bacillus cereus NVH0597-99] gi|206745377|gb|EDZ56777.1| glycyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217067915|gb|ACJ82165.1| glycyl-tRNA synthetase [Bacillus cereus AH187] gi|218535956|gb|ACK88354.1| glycyl-tRNA synthetase [Bacillus cereus AH820] gi|221242427|gb|ACM15137.1| glycine--tRNA ligase (glycyl-tRNA synthetase) [Bacillus cereus Q1] gi|225789327|gb|ACO29544.1| glycine--tRNA ligase [Bacillus cereus 03BB102] gi|227002360|gb|ACP12103.1| glycine--tRNA ligase [Bacillus anthracis str. CDC 684] gi|228596324|gb|EEK53998.1| Glycyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|228784712|gb|EEM32731.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228810944|gb|EEM57287.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228817593|gb|EEM63677.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228829717|gb|EEM75341.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229266916|gb|ACQ48553.1| glycine--tRNA ligase [Bacillus anthracis str. A0248] gi|298724627|gb|EFI65312.1| glycyl-tRNA synthetase [Bacillus cereus SJ1] gi|324328794|gb|ADY24054.1| glycyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] gi|326942679|gb|AEA18575.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 458 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 228 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|330686113|gb|EGG97734.1| glycine--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 463 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQVGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A + LK L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASQWLKDLNISEENMRLRDHDADELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 289 GELWGIASRTDF 300 >gi|312136604|ref|YP_004003941.1| toprim domain protein [Methanothermus fervidus DSM 2088] gi|311224323|gb|ADP77179.1| TOPRIM domain protein [Methanothermus fervidus DSM 2088] Length = 273 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 33/72 (45%), Gaps = 9/72 (12%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD---------ALKNETSTLKEQLPILEK 89 L +KI+++ + S S + + + + LK++ + LKE+ +E+ Sbjct: 132 QLEEKIDELENQIKSISEENKKLKKSKDELESELENFEKKYKELKDKYNELKERYKNIEE 191 Query: 90 EEHEVCSSLKKL 101 + V S+ +++ Sbjct: 192 KYKSVKSNYEEM 203 >gi|291516071|emb|CBK65281.1| hypothetical protein AL1_32180 [Alistipes shahii WAL 8301] Length = 290 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 23/111 (20%) Query: 3 DIQWIRQNPEHLD--IALK---------KRHLEPQSEYILSLDEKNRILIKKIEDIR--- 48 DI I +N + L +R +E I ++D R KIE ++ Sbjct: 56 DINAISENLALIKSRENLITVAGESEGGRRPVEEIDNDIKAIDRLLRENRAKIESLQRSA 115 Query: 49 -ARRNS------NSAQIGQAIAE--GNLSLVDALKNETSTLKEQLPILEKE 90 R + I + + V+ L+ + +++ L +E Sbjct: 116 AQLRKANLRIDGLEKMIADMNRQLAEKKAEVEQLRESLVRMGDEVKSLTEE 166 >gi|289524208|ref|ZP_06441062.1| proline--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502864|gb|EFD24028.1| proline--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 481 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 74/192 (38%), Gaps = 13/192 (6%) Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 + + PTSE + ++YS I + LP+ R E + R LR +F Sbjct: 104 EPLVIRPTSETVIGHMYSKWIQSWRDLPILINQWCNVLRWE-----KRPRLFLRTSEFLW 158 Query: 284 CELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 E TREE + + + L L G+ A TY E + Sbjct: 159 QEGHTAHATREEALEETLRMLEVYRSFMEEVLALPVLTGEKSEGERFPGAENTYTCEAMM 218 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENY 400 + + +S NF ++ + R+++ + + L++ T + V R + AI+ + Sbjct: 219 TDKRALQAGTSHFLGQNF-AKAFDIRFQNKDGE-LEYAWT---TSWGVSTRLIGAIIMTH 273 Query: 401 LNADGSVTIPTV 412 + DG V P V Sbjct: 274 ADNDGLVLPPNV 285 >gi|218900065|ref|YP_002448476.1| glycyl-tRNA synthetase [Bacillus cereus G9842] gi|218541497|gb|ACK93891.1| glycyl-tRNA synthetase [Bacillus cereus G9842] Length = 458 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 228 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|12230036|sp|Q9JHU4|DYHC1_MOUSE RecName: Full=Cytoplasmic dynein 1 heavy chain 1; AltName: Full=Cytoplasmic dynein heavy chain 1; AltName: Full=Dynein heavy chain, cytosolic gi|9717245|gb|AAF91078.1| cytoplasmic dynein heavy chain [Mus musculus] Length = 4644 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3204 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3258 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3259 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3318 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3319 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3377 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3378 EIVNRASLA 3386 >gi|320593002|gb|EFX05411.1| Rho guanyl nucleotide exchange [Grosmannia clavigera kw1407] Length = 1714 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 38/104 (36%), Gaps = 17/104 (16%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSE----------YILSLDEKNRILIKKIEDIRARRN- 52 ++ + ++ + +L + Q + + ++D+ + + E + + N Sbjct: 1598 LKALEEHVSQVTQSLADKQEALQLDMDNSVRVAEAKVRAIDQLYKEATAENELLYEKFNT 1657 Query: 53 SNSAQIGQAIAEG---NLSLVDALKNETST---LKEQLPILEKE 90 + +G LV LK ++ LK++ + +E Sbjct: 1658 ELGKIVKALKGKGRDDKEELVTRLKEQSEETARLKKENARMRRE 1701 >gi|217968007|ref|YP_002353513.1| SMC domain protein [Dictyoglomus turgidum DSM 6724] gi|217337106|gb|ACK42899.1| SMC domain protein [Dictyoglomus turgidum DSM 6724] Length = 978 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 47/99 (47%), Gaps = 5/99 (5%) Query: 3 DIQWIRQNPEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 D+ I++ E ++ L K R +E S I+ ++ + LI++I + + Sbjct: 201 DLPEIKKKIEEVEEQLNKIRKIEL-SHEIMKKEKLLKTLIEEITKLEEEIEKVRKDVALL 259 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + L NE +++E++ ILEK++++ +++ Sbjct: 260 ---ERYKEEEKLINEIRSMEEKINILEKQKNQTLEKIQE 295 >gi|225622180|ref|YP_002725174.1| hypothetical protein BSV1_R47 [Borrelia sp. SV1] gi|225547407|gb|ACN93388.1| conserved hypothetical protein [Borrelia sp. SV1] Length = 172 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 32/69 (46%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 ++ KIE++R NS S + + + +++LKNE + L ++ I E E + Sbjct: 24 SMLSKIENLRFETNSLSKECNKKSRKCVNEKINSLKNELNDLIKECSIREMEFYYEYIKR 83 Query: 99 KKLISCIPN 107 + + N Sbjct: 84 LSAVHEVEN 92 >gi|193216780|ref|YP_002000022.1| massive surface protein MspE [Mycoplasma arthritidis 158L3-1] gi|193002103|gb|ACF07318.1| massive surface protein MspE [Mycoplasma arthritidis 158L3-1] Length = 2992 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 51/121 (42%), Gaps = 7/121 (5%) Query: 4 IQWIRQNPEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIE----DIRARRNSNSAQ 57 ++ I+++ E++ L ++ + +++ + +E N+ L I+ D++ ++N + Sbjct: 1955 LEQIKKDLENIKNDLDNANKNFDSKTD-LKDKEEANKALKDAIDKATSDLQKQKNEANNL 2013 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 A + +++ ++L ++ +KE + + KK + E + Sbjct: 2014 QEDAKKSEANQEIKTIQDLIASLTKKHQDKQKEIKQTKDANKKKANDAIAKADEALNKAN 2073 Query: 118 S 118 Sbjct: 2074 E 2074 Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 3/76 (3%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 + I+ + LK + + ++E +LD + IK IE ++ N + + I Sbjct: 708 KVIKDQIDAAKENLKNLNKKVENEFKAKNLDAL-KETIKDIEALQEEANKI-ESLAKTIQ 765 Query: 64 EGNLSLVDALKNETST 79 + L Sbjct: 766 SKHEQDAADLSKNVRD 781 >gi|167747961|ref|ZP_02420088.1| hypothetical protein ANACAC_02693 [Anaerostipes caccae DSM 14662] gi|167652611|gb|EDR96740.1| hypothetical protein ANACAC_02693 [Anaerostipes caccae DSM 14662] Length = 463 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 176 TAQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEI----TPGNFTFRTREFEQMELEFFC 231 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + LK L + + + +L F + T D+E + Sbjct: 232 EPDTDLEWFAYWKDFCINWLKTLGITDDQMRVRDHGKEELSFYSKATSDIEFLFPF--GW 289 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 290 GELWGIADRTDY 301 >gi|157821897|ref|NP_001100735.1| centromere protein J [Rattus norvegicus] gi|149064058|gb|EDM14328.1| centromere protein J (predicted) [Rattus norvegicus] Length = 1307 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 20/179 (11%), Positives = 44/179 (24%), Gaps = 7/179 (3%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLD--EKNRILIKKIEDIRARRNSNSAQIGQAI-- 62 +R E L+K + + + L E+ + ++ ++ R A Sbjct: 881 LRIERESALEKLRKEIADFEQQKARELARIEEYKK--EETRKLQKERKVFEKYTAAARTF 938 Query: 63 -AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + ALK + L+E L E + L+ I + + Sbjct: 939 PDKKEREEIQALKQQIQELQEDLKRKETKWSSTHGRLRSQIEMLVKENTDLREEIKVMER 998 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 L + + + + G + Q Sbjct: 999 FRLEAWKRAEAIENSPKACQYIMATKKDESMNSSIQFQKSHASLGVQGEKYKKKYLPAQ 1057 >gi|134288917|ref|NP_084514.2| cytoplasmic dynein 1 heavy chain 1 [Mus musculus] Length = 4644 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3204 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3258 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3259 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3318 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3319 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3377 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3378 EIVNRASLA 3386 >gi|126700263|ref|YP_001089160.1| hypothetical protein CD2649 [Clostridium difficile 630] gi|255101817|ref|ZP_05330794.1| hypothetical protein CdifQCD-6_13469 [Clostridium difficile QCD-63q42] gi|255307684|ref|ZP_05351855.1| hypothetical protein CdifA_13927 [Clostridium difficile ATCC 43255] gi|115251700|emb|CAJ69535.1| conserved hypothetical protein [Clostridium difficile] Length = 232 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 17 ALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 ++ R + + L E+ + L K+ E++++ NS I + N D LK+E Sbjct: 29 NIENRGMTT-FKRGEQLTEELKSLKKEKENLQSEVNSVKKDIETYRGKNNEGEQDILKSE 87 Query: 77 TST 79 Sbjct: 88 IEK 90 >gi|242024286|ref|XP_002432559.1| eps-15, putative [Pediculus humanus corporis] gi|212518019|gb|EEB19821.1| eps-15, putative [Pediculus humanus corporis] Length = 1098 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 10/105 (9%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 DI + + L+ + ++ + + + + + L +++ + A Q G+A Sbjct: 325 DIDKLVKEKNILEADIAQKEADIKIKN-----SEVKNLQSEVDTLAATLKQLENQKGEAQ 379 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 ++ LKN+ LK Q E+ + L + N Sbjct: 380 KR-----LNDLKNQVEKLKSQAAEQEESLKSQETELNSKKQELEN 419 >gi|194881557|ref|XP_001974897.1| GG22026 [Drosophila erecta] gi|190658084|gb|EDV55297.1| GG22026 [Drosophila erecta] Length = 1040 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 17/99 (17%) Query: 18 LKKRHLEPQSEYILSLDEKNRILIKKIE---------DIRARRNSNSAQIG---QAIAEG 65 KR+ + I +DE+ + K E ++RA+ N + Q + Sbjct: 199 QAKRN-----KEIKEVDERLKQAKAKQEQELKDIIEQELRAKINKIEEEFAEQLQTFKKN 253 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 + L+ E + L +KE + +C Sbjct: 254 QEQELKRLRKELKEKDQALGQRKKEVEGEELVRVEKNNC 292 >gi|126138470|ref|XP_001385758.1| mitochondrial threonyl tRNA synthetase [Scheffersomyces stipitis CBS 6054] gi|126093036|gb|ABN67729.1| mitochondrial threonyl tRNA synthetase [Scheffersomyces stipitis CBS 6054] Length = 449 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 56/178 (31%), Gaps = 27/178 (15%) Query: 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 H + L QFM + T ++G+ EV PL+ + + +G + DDMF Sbjct: 33 TPGSIFFLPHGTRIFNKLVQFMKNQQT-KYGFQEVITPLIYKSKLWETSGHWQNYKDDMF 91 Query: 221 CTT-----------------------DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTL 257 L P + ++S LP+R + Sbjct: 92 KVVGNDVSKEHDIHNEQYSHDKSEGLHEYGLKPMNCPGHCLIFSKFDRSYNELPIRLSDF 151 Query: 258 APSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + R+EA A G+ R +F + + E ++ + K + Sbjct: 152 SSLHRNEASGALS---GLTRVRRFHQDDGHIFCEMGQINQEIHNTINLIKGTYKVFGI 206 >gi|110623251|emb|CAI94864.2| heat shock protein 101 [Triticum turgidum subsp. durum] Length = 913 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 12/103 (11%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 395 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKARLVEVRKELDD 454 Query: 69 LVDAL----------KNETSTLKEQLPILEKEEHEVCSSLKKL 101 L D L K +++ E+ + + + +++ Sbjct: 455 LRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFTLQEAERRM 497 >gi|4558484|gb|AAD22629.1|AF097363_1 heat shock protein 101 [Triticum aestivum] Length = 918 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 12/103 (11%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 395 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKARLVEVRKELDD 454 Query: 69 LVDAL----------KNETSTLKEQLPILEKEEHEVCSSLKKL 101 L D L K +++ E+ + + + +++ Sbjct: 455 LRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFTLQEAERRM 497 >gi|11561808|gb|AAC83689.2| 101 kDa heat shock protein [Triticum aestivum] Length = 918 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 12/103 (11%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 395 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKARLVEVRKELDD 454 Query: 69 LVDAL----------KNETSTLKEQLPILEKEEHEVCSSLKKL 101 L D L K +++ E+ + + + +++ Sbjct: 455 LRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFTLQEAERRM 497 >gi|49478811|ref|YP_038935.1| glycyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|59798535|sp|Q6HBZ1|SYG_BACHK RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|49330367|gb|AAT61013.1| glycine--tRNA ligase (glycyl-tRNA synthetase, class II) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 458 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 228 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGVASRTDFDLKR 301 >gi|66811376|ref|XP_639868.1| hypothetical protein DDB_G0285101 [Dictyostelium discoideum AX4] gi|74853977|sp|Q54NP8|KIF4_DICDI RecName: Full=Kinesin-related protein 4; AltName: Full=Kinesin family member 4; AltName: Full=Kinesin-7 gi|60466817|gb|EAL64863.1| hypothetical protein DDB_G0285101 [Dictyostelium discoideum AX4] Length = 1922 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 30/74 (40%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 + + K+ LE E ++D K + I+ + I++ + S +I + + K Sbjct: 1223 EKDMIKKELEKLREKFNAIDAKLKQAIQDKQTIQSEKQSLEREIKDLKRSHTSTETELDK 1282 Query: 75 NETSTLKEQLPILE 88 + + L + + Sbjct: 1283 LKKTHLAADVKSKD 1296 >gi|332843102|ref|XP_003314564.1| PREDICTED: cytoplasmic dynein 1 heavy chain 1-like [Pan troglodytes] Length = 4545 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3105 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3159 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3160 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3219 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3220 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3278 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3279 EIVNRASLA 3287 >gi|326434145|gb|EGD79715.1| alanyl-tRNA synthetase [Salpingoeca sp. ATCC 50818] Length = 955 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 6/75 (8%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILI---KKIEDIRARRNSNSAQIGQAIAEGNLS 68 + + ++ + ++ + SLD + + E++RAR + S + +A + Sbjct: 772 DAYERRIRD---DLDAKEVTSLDAELGTATIPAVRKEEMRARLKAMSKKHAEARLAERKA 828 Query: 69 LVDALKNETSTLKEQ 83 K + L E+ Sbjct: 829 KAAHAKTRANELIEE 843 >gi|289616057|emb|CBI57156.1| putative RhoGEF group protein [Sordaria macrospora] Length = 1580 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 14/103 (13%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSE----YILSLDEKNRILIKKIEDIRARRN-SNS 55 MLD+Q A R +E + + ++D+ + + E + + N Sbjct: 1453 MLDLQE--------RQAEINREMEVTLKAAEAKVKAIDQLYKEATAENELLYEKFNSELG 1504 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 + +G + L + E+ ++KE + + Sbjct: 1505 KMLKALKGKGR-EDKEELLAKLRDQSEEAARVKKENARLKREM 1546 >gi|255725396|ref|XP_002547627.1| hypothetical protein CTRG_01934 [Candida tropicalis MYA-3404] gi|240135518|gb|EER35072.1| hypothetical protein CTRG_01934 [Candida tropicalis MYA-3404] Length = 459 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 43/118 (36%), Gaps = 13/118 (11%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDI--RAR----RN-SNSA 56 ++ + +N + L K+ + + + LDE + LI+K ED+ R+ RN S Sbjct: 291 LKDMSENIDEYKKQLLKKSKDLK-DTSKDLDEFKKELIRKNEDLVRRSEELVRRNEELSK 349 Query: 57 QIGQAIAEGNLSLVD-----ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + + L+ + L+ + +E + +++ + Sbjct: 350 REKYLEKRQKDLEKELIEDFELRKQAIELEAKEVRMEYQREFNLVVEQEVKRRLEQQT 407 >gi|170584111|ref|XP_001896860.1| Zinc finger, C2H2 type family protein [Brugia malayi] gi|158595783|gb|EDP34291.1| Zinc finger, C2H2 type family protein [Brugia malayi] Length = 336 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 25/269 (9%), Positives = 60/269 (22%), Gaps = 3/269 (1%) Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP-NVPLEEVPIGTS 118 Q + D + E + +KE + E CS KK S G Sbjct: 55 QEKRKIKKQRCDICRKEVAKIKEHMMTHTGEMPYCCSICKKNFSRSSHVKGHMMTHTGEK 114 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + + + ++ + + LS + H + Sbjct: 115 PYCCPICKQNFTQSQSMKKHMMTHTGEKPYCCSICKKNFSLSAHVKGHMMTHTGEKPYSC 174 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 + + + + Q + M S+ Sbjct: 175 STCKKIFNDYSNMKKHMMTHTGEKPYCCSICKQNFTHSQSMKKHMMIHTGEKPYSCSICK 234 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 K + T P + G +++H + + Sbjct: 235 QNFTHSQSMKKHMMIHTGEKP-YNCPRCGKSFIVSGNMKRHMMTHTGEKPHSCPVCGKSY 293 Query: 299 HERMLSCAEEILKRLDL-HYRVVSLCTGD 326 ++ + ++ ++C+ D Sbjct: 294 VQKSDLHIHTAIHGMNSRPVYHCTMCSKD 322 >gi|110623253|emb|CAI94865.2| heat shock protein 101 [Triticum turgidum subsp. durum] Length = 917 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 12/103 (11%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 395 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKARLVEVRKELDD 454 Query: 69 LVDAL----------KNETSTLKEQLPILEKEEHEVCSSLKKL 101 L D L K +++ E+ + + + +++ Sbjct: 455 LRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFTLQEAERRM 497 >gi|329663701|ref|NP_001193067.1| cytoplasmic dynein 1 heavy chain 1 [Bos taurus] gi|297488294|ref|XP_002696885.1| PREDICTED: cytoplasmic dynein 1 heavy chain 1-like [Bos taurus] gi|296475313|gb|DAA17428.1| cytoplasmic dynein 1 heavy chain 1-like [Bos taurus] Length = 4645 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3205 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3259 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3260 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3319 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3320 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3378 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3379 EIVNRASLA 3387 >gi|326928755|ref|XP_003210540.1| PREDICTED: DNA repair protein RAD50-like [Meleagris gallopavo] Length = 1312 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 1/89 (1%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ E I LD L + ED+ +R +++ +I Q G V + + Sbjct: 903 REIKEAKEQIFPLDATLEKLQQDKEDLINKRTASNKEI-QEKMNGIKEKVKDINKYMKEI 961 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + + ++E + ++ Sbjct: 962 ESYIQQGKEEYKKQKECELDEVNSQLAAC 990 >gi|119602170|gb|EAW81764.1| dynein, cytoplasmic 1, heavy chain 1, isoform CRA_f [Homo sapiens] Length = 4649 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3227 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3281 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3282 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3341 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3342 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3400 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3401 EIVNRASLA 3409 >gi|119602166|gb|EAW81760.1| dynein, cytoplasmic 1, heavy chain 1, isoform CRA_b [Homo sapiens] Length = 4588 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3205 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3259 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3260 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3319 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3320 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3378 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3379 EIVNRASLA 3387 >gi|33350932|ref|NP_001367.2| cytoplasmic dynein 1 heavy chain 1 [Homo sapiens] gi|332254191|ref|XP_003276212.1| PREDICTED: cytoplasmic dynein 1 heavy chain 1-like [Nomascus leucogenys] gi|57015308|sp|Q14204|DYHC1_HUMAN RecName: Full=Cytoplasmic dynein 1 heavy chain 1; AltName: Full=Cytoplasmic dynein heavy chain 1; AltName: Full=Dynein heavy chain, cytosolic gi|50345286|gb|AAT74625.1| dynein, cytoplasmic, heavy polypeptide 1 [Homo sapiens] gi|166788526|dbj|BAG06711.1| DYNC1H1 variant protein [Homo sapiens] gi|261857552|dbj|BAI45298.1| dynein, cytoplasmic 1, heavy chain 1 [synthetic construct] Length = 4646 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3206 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3260 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3261 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3320 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3321 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3379 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3380 EIVNRASLA 3388 >gi|148491097|ref|NP_062099.3| cytoplasmic dynein 1 heavy chain 1 [Rattus norvegicus] gi|294543|gb|AAA41103.1| dynein heavy chain [Rattus norvegicus] gi|149044126|gb|EDL97508.1| rCG27764, isoform CRA_a [Rattus norvegicus] Length = 4644 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3204 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3258 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3259 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3318 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3319 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3377 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3378 EIVNRASLA 3386 >gi|71891782|dbj|BAA20783.3| KIAA0325 protein [Homo sapiens] Length = 4658 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3218 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3272 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3273 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3332 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3333 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3391 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3392 EIVNRASLA 3400 >gi|301782735|ref|XP_002926785.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic dynein 1 heavy chain 1-like, partial [Ailuropoda melanoleuca] Length = 4640 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3200 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3254 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3255 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3314 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3315 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3373 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3374 EIVNRASLA 3382 >gi|149244218|ref|XP_001526652.1| protein GCN20 [Lodderomyces elongisporus NRRL YB-4239] gi|146449046|gb|EDK43302.1| protein GCN20 [Lodderomyces elongisporus NRRL YB-4239] Length = 751 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 28/229 (12%), Positives = 65/229 (28%), Gaps = 26/229 (11%) Query: 18 LKKRHLE-PQSEYILSLDEKNRILIKK----------IEDIRARRNSNSAQIGQAIAEGN 66 + R + P + +L D + L+++ IE++R S ++ + Sbjct: 262 QEIRGDDTPAIQSVLDADVWRKSLLQEELKINERIAEIENLRKEFEEESLEVKKL----- 316 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + D L+ + E+L +E ++ E ++ S R Sbjct: 317 DNERDDLEMHLQEINEKLYEMESDKAESKAAAILYGLGFTKETQNIPTKQFSGG----WR 372 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 A+ + + E ++D T L+ + + L + Sbjct: 373 MRLSLARALFCQPDLLLLDEPSNMLDVPSITFLANYLQTYKSTVLVVSHDRAFLNEVATD 432 Query: 187 TSEHGYTEVSAPLLVRDEAMYGT------GQIPKFADDMFCTTDGRWLI 229 + ++ Y T Q ++ M + I Sbjct: 433 IIHQHSERLDYYRGSNFDSFYATREERIKNQKREYESQMAYRQHLQEFI 481 >gi|30261254|ref|NP_843631.1| spore germination protein GerPC [Bacillus anthracis str. Ames] gi|47526416|ref|YP_017765.1| spore germination protein GerPC [Bacillus anthracis str. 'Ames Ancestor'] gi|49184086|ref|YP_027338.1| spore germination protein GerPC [Bacillus anthracis str. Sterne] gi|65318525|ref|ZP_00391484.1| COG0419: ATPase involved in DNA repair [Bacillus anthracis str. A2012] gi|165873098|ref|ZP_02217716.1| spore germination protein GerPC [Bacillus anthracis str. A0488] gi|167635436|ref|ZP_02393750.1| spore germination protein GerPC [Bacillus anthracis str. A0442] gi|167640199|ref|ZP_02398465.1| spore germination protein GerPC [Bacillus anthracis str. A0193] gi|170688099|ref|ZP_02879311.1| spore germination protein GerPC [Bacillus anthracis str. A0465] gi|170707657|ref|ZP_02898109.1| spore germination protein GerPC [Bacillus anthracis str. A0389] gi|177655502|ref|ZP_02936945.1| spore germination protein GerPC [Bacillus anthracis str. A0174] gi|190566814|ref|ZP_03019731.1| spore germination protein GerPC [Bacillus anthracis Tsiankovskii-I] gi|227816008|ref|YP_002816017.1| spore germination protein GerPC [Bacillus anthracis str. CDC 684] gi|229603720|ref|YP_002865677.1| spore germination protein GerPC [Bacillus anthracis str. A0248] gi|254682685|ref|ZP_05146546.1| spore germination protein GerPC [Bacillus anthracis str. CNEVA-9066] gi|254725478|ref|ZP_05187260.1| spore germination protein GerPC [Bacillus anthracis str. A1055] gi|254734103|ref|ZP_05191816.1| spore germination protein GerPC [Bacillus anthracis str. Western North America USA6153] gi|254740253|ref|ZP_05197945.1| spore germination protein GerPC [Bacillus anthracis str. Kruger B] gi|254753593|ref|ZP_05205629.1| spore germination protein GerPC [Bacillus anthracis str. Vollum] gi|254758690|ref|ZP_05210717.1| spore germination protein GerPC [Bacillus anthracis str. Australia 94] gi|30254868|gb|AAP25117.1| spore germination protein GerPC [Bacillus anthracis str. Ames] gi|47501564|gb|AAT30240.1| spore germination protein GerPC [Bacillus anthracis str. 'Ames Ancestor'] gi|49178013|gb|AAT53389.1| spore germination protein GerPC [Bacillus anthracis str. Sterne] gi|164711152|gb|EDR16711.1| spore germination protein GerPC [Bacillus anthracis str. A0488] gi|167511800|gb|EDR87180.1| spore germination protein GerPC [Bacillus anthracis str. A0193] gi|167529264|gb|EDR92017.1| spore germination protein GerPC [Bacillus anthracis str. A0442] gi|170127432|gb|EDS96307.1| spore germination protein GerPC [Bacillus anthracis str. A0389] gi|170667994|gb|EDT18745.1| spore germination protein GerPC [Bacillus anthracis str. A0465] gi|172080101|gb|EDT65197.1| spore germination protein GerPC [Bacillus anthracis str. A0174] gi|190562366|gb|EDV16334.1| spore germination protein GerPC [Bacillus anthracis Tsiankovskii-I] gi|227007020|gb|ACP16763.1| spore germination protein GerPC [Bacillus anthracis str. CDC 684] gi|229268128|gb|ACQ49765.1| spore germination protein GerPC [Bacillus anthracis str. A0248] Length = 204 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 45/146 (30%), Gaps = 3/146 (2%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 IL+L+++ R L +++ +++ N S+ IG+ + + V+ L + E+ Sbjct: 23 ILNLEDQVRQLQEELNELK---NRPSSSIGKVEYKFDQLKVENLNGTLNIGLNPFSTKEQ 79 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + + + L + G + + E + E Sbjct: 80 QIEDFQVDTETLKVNPETDTNPDFYQGILQEMHRYLDEEAYNRILHFEKEERTPLDEMYR 139 Query: 150 LMDFDRATKLSGARFSVLTGHLAHLE 175 M D K R E Sbjct: 140 QMMVDDIKKQMEHRLPYYLSQAQSYE 165 >gi|154300483|ref|XP_001550657.1| predicted protein [Botryotinia fuckeliana B05.10] gi|150856590|gb|EDN31782.1| predicted protein [Botryotinia fuckeliana B05.10] Length = 457 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 6/109 (5%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 K R +E + + +++ L +++ ++ARRN+ QA A V L+ + Sbjct: 104 KDRQVEVEL-QLAQAEKEVENLKTEVKKLQARRNAY-----QAKAGKPSQDVQDLEAQLE 157 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 LK+Q L+K+ + LK+ I ++ +G + + Sbjct: 158 ELKQQKSDLQKDNLDSQQELKQAEKKIVDLCRSLAGVGKATSRPSTFWQ 206 >gi|146418078|ref|XP_001485005.1| hypothetical protein PGUG_02734 [Meyerozyma guilliermondii ATCC 6260] Length = 752 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 16/224 (7%) Query: 18 LKKRHLE-PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE--GNLSLVDALK 74 + R + P + +L D + LI++ A+ N A+I + E + + V L Sbjct: 263 QEIRGDDTPALQSVLDADVWRKSLIQE----EAKINERIAEIEKLRLEFDEDSNEVKKLD 318 Query: 75 NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK--- 131 NE L + L + ++ +E+ S + + L + Sbjct: 319 NEREDLDKHLQDVNEKLYEMESDKAESKAAAILFGLGFTKESQMNPTKSFSGGWRMRLSL 378 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 A+ + + E ++D T L+ S + L + Sbjct: 379 ARALFCEPDLLLLDEPSNMLDVPSITYLARYLQSYKSTVLVVSHDRAFLNDVATDIIHQH 438 Query: 192 YTEVSAPLLVRDEAMYGT------GQIPKFADDMFCTTDGRWLI 229 + ++ Y T Q ++ + M + I Sbjct: 439 SERLDYYRGSNFDSFYATREERIKNQRREYENQMAYRKHLQEFI 482 >gi|150401905|ref|YP_001325671.1| seryl-tRNA synthetase [Methanococcus aeolicus Nankai-3] gi|254782992|sp|A6UX37|SYS2_META3 RecName: Full=Type-2 seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase gi|150014608|gb|ABR57059.1| seryl-tRNA synthetase [Methanococcus aeolicus Nankai-3] Length = 522 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 90/311 (28%), Gaps = 35/311 (11%) Query: 56 AQIG--QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEV--------CSSLKKLISCI 105 IG + + +K E + + + + Sbjct: 138 KNIGDSELKRNIVDRAIKFVKTEIDNIGDSGEECDLTYEVCGIAPNTIVSEYKAERTISY 197 Query: 106 PNVPLEEVPIGTSANENILIRSVGKKPSAIH--LSREHFEIGEALGLMDFDRATKLSGAR 163 P EE P + E + E + + FD Sbjct: 198 NKDPTEESEKLGWVKRFSGKGQWFYTPPMTKLLRAFEELLMEECINKIGFDE----CLFP 253 Query: 164 FSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT 223 + + + G + S V + + I K D + Sbjct: 254 KLIPLEVMYKMRYLEGLPEGMYYVSPPKRDPEMFKEFVNEMMIKNEIPIHKLKDLLRN-- 311 Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLA-PSFRSEAGSAGRDTRGMLRQHQFW 282 G L P + HE+++ P++F + ++R E G ++G+ R H+F Sbjct: 312 PGYVLAPAQCEPFYQFFDHELVD-IDNPVKFVDKSGWTYRWEGGG----SKGLDRVHEFL 366 Query: 283 KCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRV-----------VSLCTGDLGFSA 331 + E V + E + + L AE++ ++LDL Y ++ F Sbjct: 367 RIETVQMGAPEFVNSVRDDTLKYAEKLAEKLDLEYWTEVGDDPFYLEGRKKEERNIEFPE 426 Query: 332 CKTYDLEVWLA 342 Y++ +WL Sbjct: 427 VPKYEMRLWLP 437 >gi|73964021|ref|XP_868578.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 1 isoform 7 [Canis familiaris] Length = 4634 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3194 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3248 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3249 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3308 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3309 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3367 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3368 EIVNRASLA 3376 >gi|57036773|ref|XP_541265.1| PREDICTED: similar to kinesin family member 27 isoform 1 [Canis familiaris] Length = 1396 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Query: 9 QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSA-QIGQAIAEGN 66 ++P+ +KKR + + LDE+ + L +++E + +R Q E Sbjct: 895 EDPDAFK--MKKRKGSFGSIDQLQKLDEQKKWLDEEVEKVLNQRQELEELQEDLKKREAI 952 Query: 67 LSLVDALKNETSTLKEQ 83 + +AL E S L+ + Sbjct: 953 VCKKEALLKEKSHLENK 969 >gi|23099946|ref|NP_693412.1| hypothetical protein OB2491 [Oceanobacillus iheyensis HTE831] gi|22778177|dbj|BAC14447.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 460 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 6/94 (6%) Query: 16 IALKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 + + + E I S+D + K+IE + ++ + +I V+ LK Sbjct: 63 KMQENKKEQNSVETEINSIDSELEDTQKQIETKQTEIDNTNDEINSL-----TEKVEELK 117 Query: 75 NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 L+E++ +L++ + LK + I Sbjct: 118 ERMKELEEEIKLLKERIEKRDELLKNRLLSIQQN 151 >gi|255327243|ref|ZP_05368317.1| glycine--tRNA ligase [Rothia mucilaginosa ATCC 25296] gi|255295523|gb|EET74866.1| glycine--tRNA ligase [Rothia mucilaginosa ATCC 25296] Length = 459 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 8/108 (7%) Query: 256 TLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 + SFR+E + R +F + E+ +D+ + L + Sbjct: 188 QIGKSFRNEI----TPGNFIFRTREFEQMEIEYFVHPDDADKYFNEWVEDCWSWFVDLGI 243 Query: 316 ---HYRVVSLCTGDLGFSACKTYDLEVWLAGQN-LYREISSCSTCGNF 359 + R + + + T D+E Q + E+ + ++ Sbjct: 244 NPDNMRRFDVPKEERAHYSAGTIDVEYRFGFQGSEWGELMGVANRTDY 291 >gi|219668839|ref|YP_002459274.1| ATP-dependent chaperone ClpB [Desulfitobacterium hafniense DCB-2] gi|219539099|gb|ACL20838.1| ATP-dependent chaperone ClpB [Desulfitobacterium hafniense DCB-2] Length = 864 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 8/78 (10%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDE-KNRILIKKIE--DIRARRNSNSAQIGQAIAEGNL 67 + +D A + +E S+ LD+ K RIL +IE ++ ++ S + E Sbjct: 393 IDLIDEAAARMRMEITSDPY-ELDQIKRRILQLEIEREALKKEKDEGSKE----RLEKIE 447 Query: 68 SLVDALKNETSTLKEQLP 85 + LK E S L+ QL Sbjct: 448 EDLANLKEERSALEAQLQ 465 >gi|94734238|emb|CAK04090.1| novel protein similar to vertebrate dynactin 1 (p150, glued homolog, Drosophila) (DCTN1) [Danio rerio] Length = 1114 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 37/109 (33%), Gaps = 6/109 (5%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIE---DIRARRNSNSAQIGQ 60 ++ + ++ E LK + E + L++ L + E ++ ++N Q+ + Sbjct: 63 LRALVKDLEEKLETLKMKRTE-DKAKLKELEKHKIQLEQLQEWKSKMQEQQNELQKQLKE 121 Query: 61 AIAEGNL--SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 A E + E + + + + ++ + L Sbjct: 122 AKREAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQLEADA 170 >gi|73964009|ref|XP_537556.2| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 1 isoform 1 [Canis familiaris] Length = 4646 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3206 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3260 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3261 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3320 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3321 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3379 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3380 EIVNRASLA 3388 >gi|73964023|ref|XP_868583.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 1 isoform 8 [Canis familiaris] Length = 4643 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3203 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3257 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3258 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3317 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3318 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3376 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3377 EIVNRASLA 3385 >gi|729378|sp|P38650|DYHC1_RAT RecName: Full=Cytoplasmic dynein 1 heavy chain 1; AltName: Full=Cytoplasmic dynein heavy chain 1; AltName: Full=Dynein heavy chain, cytosolic; AltName: Full=MAP 1C gi|402528|dbj|BAA02996.1| cytoplasmic dynein heavy chain [Rattus norvegicus] Length = 4644 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3204 RKIKETVDQVEEL---RRALRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3258 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3259 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3318 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3319 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3377 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3378 EIVNRASLA 3386 >gi|332365812|gb|EGJ43569.1| proline--tRNA ligase [Streptococcus sanguinis SK355] Length = 616 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVHDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWV 224 >gi|325270521|ref|ZP_08137121.1| hypothetical protein HMPREF9141_2331 [Prevotella multiformis DSM 16608] gi|324987097|gb|EGC19080.1| hypothetical protein HMPREF9141_2331 [Prevotella multiformis DSM 16608] Length = 656 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 40/92 (43%), Gaps = 19/92 (20%) Query: 12 EHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRNS---------NSAQIG 59 ++ LKK R + +LD + L+++ E ++ N+ S++ G Sbjct: 571 DNFRNNLKKVADRGAD-------ALDNERGRLMRRFEQLKQEVNTYENNLGFLNISSKKG 623 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 ++ + + LK++ +K+++ ++ E Sbjct: 624 NSLIDEMNRRIQKLKDDMEEVKQKIKAIDAEN 655 >gi|317060327|ref|ZP_07924812.1| prolyl-tRNA synthetase [Fusobacterium sp. D12] gi|313686003|gb|EFS22838.1| prolyl-tRNA synthetase [Fusobacterium sp. D12] Length = 569 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 7/77 (9%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSV 407 E G+ S+ + + Y D +S L G G+ VGR + A +E + +G + Sbjct: 408 ECGHIFKLGDKYSKALGASYLDEKGESKI---MLMGCYGIGVGRTMAAAIEQNYDENG-I 463 Query: 408 TIPTVLRPYMNNLAVIK 424 PT L PY+ + VI Sbjct: 464 IWPTALAPYL--VDVIP 478 >gi|332654826|ref|ZP_08420568.1| DNA gyrase, A subunit [Ruminococcaceae bacterium D16] gi|332516169|gb|EGJ45777.1| DNA gyrase, A subunit [Ruminococcaceae bacterium D16] Length = 852 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 3/83 (3%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIK-KIEDIRARRNSNSAQIGQAI 62 I+ IR + ++ L R + LD + + L E + A +I Sbjct: 406 IKIIRTSYDNAKERLMTRFGLDDVQAQAILDMRLKALQGLDREKLEAEYKELEERIAYYD 465 Query: 63 AEGNLS--LVDALKNETSTLKEQ 83 + L LK+E + ++++ Sbjct: 466 KLLSDEGLLRQVLKDELTEIRDK 488 >gi|297298636|ref|XP_001112455.2| PREDICTED: cytoplasmic dynein 1 heavy chain 1-like [Macaca mulatta] Length = 4524 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3084 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3138 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3139 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3198 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3199 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3257 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3258 EIVNRASLA 3266 >gi|291280297|ref|YP_003497132.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Deferribacter desulfuricans SSM1] gi|290754999|dbj|BAI81376.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Deferribacter desulfuricans SSM1] Length = 867 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 15/124 (12%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDI----RARRN------SN 54 + +RQ E ALKK E ++ L+E+ L +KI ++ + +N Sbjct: 418 RKLRQ-LEIERQALKKEKDEASKSRLVKLEEEISNLQEKINELKTHWQNEKNLIMESRKI 476 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLK----EQLPILEKEEHEVCSSLKKLISCIPNVPL 110 +I QA E + + S +K +L +E + ++K + Sbjct: 477 KEEIEQAKIEMQKAEREGNLELASQIKYGKLIELQQKLEEVNNKLKEIQKNKKMLKEEVD 536 Query: 111 EEVP 114 EE Sbjct: 537 EEDI 540 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 15/104 (14%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSA--------QIGQ 60 + +D A K +E S + L+ K R L + + ++ ++ S +I Sbjct: 392 IDLIDEAAAKIRMEIDSLPTELDELERKLRQLEIERQALKKEKDEASKSRLVKLEEEISN 451 Query: 61 AIAEGNL-----SLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + N L E+ +KE++ + E + Sbjct: 452 LQEKINELKTHWQNEKNLIMESRKIKEEIEQAKIEMQKAEREGN 495 >gi|221231165|ref|YP_002510317.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225853864|ref|YP_002735376.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|254782918|sp|B8ZKT3|SYP_STRPJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782920|sp|C1CC55|SYP_STRZJ RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|220673625|emb|CAR68112.1| prolyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225723520|gb|ACO19373.1| prolyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|332076711|gb|EGI87173.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17545] Length = 617 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPTLLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|149044127|gb|EDL97509.1| rCG27764, isoform CRA_b [Rattus norvegicus] Length = 4045 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3166 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3220 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3221 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3280 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3281 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3339 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3340 EIVNRASLA 3348 >gi|149017957|ref|ZP_01834416.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|147931521|gb|EDK82499.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] Length = 617 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPTLLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|119614975|gb|EAW94569.1| sperm associated antigen 9, isoform CRA_a [Homo sapiens] Length = 1069 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|119602165|gb|EAW81759.1| dynein, cytoplasmic 1, heavy chain 1, isoform CRA_a [Homo sapiens] Length = 4583 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3141 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3195 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3196 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3255 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3256 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3314 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3315 EIVNRASLA 3323 >gi|73964017|ref|XP_868575.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 1 isoform 5 [Canis familiaris] Length = 4625 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3195 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3249 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3250 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3309 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3310 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3368 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3369 EIVNRASLA 3377 >gi|73964019|ref|XP_868576.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 1 isoform 6 [Canis familiaris] Length = 4627 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3185 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3239 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3240 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3299 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3300 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3358 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3359 EIVNRASLA 3367 >gi|322381604|ref|ZP_08055577.1| hypothetical protein PL1_0791 [Paenibacillus larvae subsp. larvae B-3650] gi|321154440|gb|EFX46743.1| hypothetical protein PL1_0791 [Paenibacillus larvae subsp. larvae B-3650] Length = 456 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 47/151 (31%), Gaps = 13/151 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 169 TAQGIFVNFKNVQRTMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 224 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + L L + + L D L + T D+E + Sbjct: 225 KPGEDLEWFSYWREFCRNWLLSLGMKEANMRLRDHDKEELSHYSNATSDIEYKFPF--GW 282 Query: 348 REISSCSTCGNFQSRRMNSRYRDPNSKSLKF 378 E+ + +F R+ + + + F Sbjct: 283 GELWGIADRTDFD----LIRHMEHSGEDFHF 309 >gi|163782453|ref|ZP_02177451.1| ATPase subunit of ATP-dependent protease [Hydrogenivirga sp. 128-5-R1-1] gi|159882486|gb|EDP75992.1| ATPase subunit of ATP-dependent protease [Hydrogenivirga sp. 128-5-R1-1] Length = 1002 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 7/88 (7%) Query: 13 HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 + A ++ + +E + LD K + L KKIE++ +I +A G+ Sbjct: 574 KVQKAQLEKEKQELTEKLGGLDIKVKELKKKIEEL-------DKEIMKAAESGDYEREAQ 626 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKK 100 LK E L+++L LE ++ E Sbjct: 627 LKIEKVNLEKELKALESQKAEELVVGWD 654 >gi|146185685|ref|XP_001032318.2| Growth-arrest-specific protein 8 [Tetrahymena thermophila] gi|146143254|gb|EAR84655.2| Growth-arrest-specific protein 8 [Tetrahymena thermophila SB210] Length = 472 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNS----NSAQIGQAIAEGNLSLVDALKN 75 ++ L+ + + + + DE+ + +++ E N +I Q + +A+ Sbjct: 257 RKTLKNEIKELQTKDEEYKKTLQQTEKGYKELNEPLQALGIEIIQLKKQ--DEEQEAIIK 314 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 E LK+++ E+ ++ + + + E + N+ + Sbjct: 315 EKEELKQKIDNQERLFRKLEYEYEVKLQQFQYLERERNALYAKFNQTVFEIH 366 >gi|28629052|gb|AAO49455.1|AF487263_3 heat shock protein 78 [Leptosphaeria maculans] gi|312212325|emb|CBX92408.1| similar to ATP-dependent chaperone protein ClpB [Leptosphaeria maculans] Length = 807 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 10/83 (12%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQI----------GQAIAEGNLSLVDALKNET 77 + I LD + + ++E +R + S + Q A+G + + E Sbjct: 347 DAIQELDRQIMTIQIELESLRKETDIASKERRQRLEESLKQKQEEAKGLTEKWEKERAEL 406 Query: 78 STLKEQLPILEKEEHEVCSSLKK 100 +K LEK E+ + ++ Sbjct: 407 EEIKNAQENLEKARLELEQARRE 429 >gi|73964013|ref|XP_868571.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 1 isoform 3 [Canis familiaris] Length = 4574 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3142 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3196 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3197 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3256 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3257 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3315 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3316 EIVNRASLA 3324 >gi|320535691|ref|ZP_08035780.1| hypothetical protein HMPREF9554_00501 [Treponema phagedenis F0421] gi|320147451|gb|EFW38978.1| hypothetical protein HMPREF9554_00501 [Treponema phagedenis F0421] Length = 333 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Query: 23 LEPQSEYILSLDEKNR---ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 ++ + + LDE + L +++ + A + +A + G+ + LK E Sbjct: 152 MDEGVKKMNELDEAKKRIAELEAEVQKLTAEL-----EKAKAGSNGSGEDFEKLKTENEE 206 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 LK +L +++ E SL + E Sbjct: 207 LKRKLLAFQEKHPEDELSLSDSDPRTKMLLNE 238 >gi|326531902|dbj|BAK01327.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 916 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 12/103 (11%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKARLVEVRKELDD 453 Query: 69 LVDAL----------KNETSTLKEQLPILEKEEHEVCSSLKKL 101 L D L K +++ E+ + + + +++ Sbjct: 454 LRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFTLQEAERRM 496 >gi|290974289|ref|XP_002669878.1| predicted protein [Naegleria gruberi] gi|284083431|gb|EFC37134.1| predicted protein [Naegleria gruberi] Length = 906 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 21/192 (10%), Positives = 58/192 (30%), Gaps = 9/192 (4%) Query: 13 HLDIALKKRHLEPQSEYIL-SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 + +++R +P IL L ++ R L ++ E + + GQ + EG+ D Sbjct: 353 KFERDMQERFYDPDESEILVDLQQQKRQLDQE-EKLL-------KEAGQKLQEGSPEAND 404 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK 131 LK + + ++ + + E +S + + + A + + Sbjct: 405 NLKKQFKIMIKRRELEKVENDITKTSTLDSLLKEGDGSASGIKEVEKAKKKPKNKYNFIG 464 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 + E + + + + + + + + + Sbjct: 465 FISSCFEEHMSVYIEYEEESMRETLSNIIQKETWDMNSEYSSSQDLFMYIVESMKSCSAL 524 Query: 192 YTEVSAPLLVRD 203 + + LV Sbjct: 525 SKKKTLYDLVEK 536 >gi|228910750|ref|ZP_04074559.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228848701|gb|EEM93546.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 200] Length = 487 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 201 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 256 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 257 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 314 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 315 GELWGVASRTDFDLKR 330 >gi|168485970|ref|ZP_02710478.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|183570860|gb|EDT91388.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] Length = 617 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ P L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLTPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|149636946|ref|XP_001512683.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 1 [Ornithorhynchus anatinus] Length = 4644 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3204 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3258 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3259 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3318 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3319 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3377 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3378 EIVNRASLA 3386 >gi|170719683|ref|YP_001747371.1| hypothetical protein PputW619_0497 [Pseudomonas putida W619] gi|169757686|gb|ACA71002.1| protein of unknown function DUF1090 [Pseudomonas putida W619] Length = 131 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 25/49 (51%) Query: 37 NRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLP 85 + +K+ + R N + + +A+ +G+ V+ K++ + K++L Sbjct: 75 RKEREQKVLEARHEVNQRTKDLDKAMKKGDPEHVNKRKDKLAEAKKELQ 123 >gi|75760257|ref|ZP_00740310.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228903415|ref|ZP_04067542.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228968019|ref|ZP_04129027.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|74492252|gb|EAO55415.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228791690|gb|EEM39284.1| Glycyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228856190|gb|EEN00723.1| Glycyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 487 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 201 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 256 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + + L L + + L +L + T D+E + Sbjct: 257 KPGEDLEWFAFWRETCKNWLLSLGMTEESMRLRDHGEEELSHYSNATTDIEFKFPF--GW 314 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 315 GELWGVASRTDFDLKR 330 >gi|326502136|dbj|BAK06560.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 977 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 9/90 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 E L K+R E + K R ++ E ++ + + + + D Sbjct: 364 EALRE-QKRREKE-------EAEVKKRQKRQEEEALK-EQKRREKEEAEMRKQEKKQQED 414 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 ALK + KE+ ++++ + + K+ Sbjct: 415 ALKEQKRREKEEAETRKQQKKQQEEADKEQ 444 >gi|308509830|ref|XP_003117098.1| hypothetical protein CRE_01668 [Caenorhabditis remanei] gi|308242012|gb|EFO85964.1| hypothetical protein CRE_01668 [Caenorhabditis remanei] Length = 603 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 62/163 (38%), Gaps = 17/163 (10%) Query: 1 MLDIQ----WIRQNPEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNS- 53 ML ++ +++N + + L +K+ +P+ E I ++ + L+KK+E ++N Sbjct: 91 MLKLKSEYEELKKNKKEMLEELTKEKKGSDPKLELIQ---KEIKELLKKLEQ-EEKKNEE 146 Query: 54 -NSAQIGQAIAE-----GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 G+ G S +DAL LKE+L EKE+ E + +K+ Sbjct: 147 LVEKNRGEMEKAEVETVGLKSEIDALAEVIEDLKEKLSQKEKEKEEWQNKMKQQEESFSI 206 Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 V + + + + + E+ E Sbjct: 207 VTRNYSTLELEIQDWRNKLQDEYNKNDELVKKLEQEMKEKEMW 249 >gi|317472458|ref|ZP_07931781.1| glycyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|316900076|gb|EFV22067.1| glycyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 463 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 176 TAQGIFVNFKNVQRTSRKKIPFGIGQVGKSFRNEI----TPGNFTFRTREFEQMELEFFC 231 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + LK L + + + +L F + T D+E + Sbjct: 232 EPDTDLEWFAYWKEFCINWLKTLGITDDQMRVRDHGKEELSFYSKATSDIEFLFPF--GW 289 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 290 GELWGIADRTDY 301 >gi|289614074|emb|CBI59089.1| unnamed protein product [Sordaria macrospora] Length = 841 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 62/226 (27%), Gaps = 34/226 (15%) Query: 15 DIALKKRHLEPQSEYIL-------------SLDEKNRILIKKIEDIR-ARRNSNS----- 55 L + + + L L +NR L +++ +R A N + Sbjct: 237 ARKLGNKGINDRVSRFLASMSSTNNGDPDKELAIENRSLHQQLASLRRAEENLLAENQTI 296 Query: 56 --------AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + QA + +L++ E LKE+ E ++ + Sbjct: 297 ANQLTATQKEFAQAKK--DRALLERAWEEM--LKEREEKYEAKKKFFKQEQFIAMLEHKL 352 Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA--LGLMDFDRATKLSGARFS 165 E+ + L V ++ I E E F + + Sbjct: 353 TVHEDNLSEQDGTISQLEAKVAEQEKQIAERDERIAELEKATTPKKSFKSQPEQGLVLSN 412 Query: 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 A+ +D T + + V+ + ++ + Q Sbjct: 413 SDISTWFSTRTAVWNSWVDEFTHPNV-NRIIELHPVQQKELFRSIQ 457 >gi|294867385|ref|XP_002765093.1| brca1-associated protein, putative [Perkinsus marinus ATCC 50983] gi|239864973|gb|EEQ97810.1| brca1-associated protein, putative [Perkinsus marinus ATCC 50983] Length = 576 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 8/82 (9%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 +R E + +L++ ++ LD+K R L +++ ++ QI + Sbjct: 469 LRSEEEDIKASLERLRVDCS-----DLDDKRRQLREEVARLKKDLQR--RQIASTVRTKK 521 Query: 67 -LSLVDALKNETSTLKEQLPIL 87 L+ + + LK+ L + Sbjct: 522 LHDEKADLREQINDLKQYLSMR 543 >gi|311747311|ref|ZP_07721096.1| alanine--tRNA ligase [Algoriphagus sp. PR1] gi|311302637|gb|EAZ83190.2| alanine--tRNA ligase [Algoriphagus sp. PR1] Length = 874 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 21/56 (37%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 R E + I L + + L K IE + +N +I E ++ L E Sbjct: 709 RGQENLVKEIQELLKHPKDLKKSIEALIQEKNDLKKEIELLYQEKAGAVKGELLKE 764 >gi|119602168|gb|EAW81762.1| dynein, cytoplasmic 1, heavy chain 1, isoform CRA_d [Homo sapiens] Length = 4241 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3205 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3259 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3260 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3319 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3320 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3378 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3379 EIVNRASLA 3387 >gi|118096020|ref|XP_413937.2| PREDICTED: similar to uveal autoantigen with coiled-coil domains and ankyrin repeats [Gallus gallus] Length = 1416 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA-----EGNLSLVDALKNETSTLKE 82 + +L + K + E + A +NS S Q+ A E + ++ALK+ L++ Sbjct: 767 KKLLEITRKYNESQAEAERLLAEKNSLSEQVSHLQAVYLSPEQHKEEMEALKSNGIELEK 826 Query: 83 QLPILEKEEHEVCSSLKK 100 QL L+++ + + K Sbjct: 827 QLAELQRKYDDEQEKMCK 844 >gi|73964015|ref|XP_868573.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 1 isoform 4 [Canis familiaris] Length = 4118 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3142 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3196 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3197 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3256 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3257 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3315 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3316 EIVNRASLA 3324 >gi|89894414|ref|YP_517901.1| hypothetical protein DSY1668 [Desulfitobacterium hafniense Y51] gi|89333862|dbj|BAE83457.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 864 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 8/78 (10%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDE-KNRILIKKIE--DIRARRNSNSAQIGQAIAEGNL 67 + +D A + +E S+ LD+ K RIL +IE ++ ++ S + E Sbjct: 393 IDLIDEAAARMRMEITSDPY-ELDQIKRRILQLEIEREALKKEKDEGSKE----RLEKIE 447 Query: 68 SLVDALKNETSTLKEQLP 85 + LK E S L+ QL Sbjct: 448 EDLANLKEERSALEAQLQ 465 >gi|326918648|ref|XP_003205600.1| PREDICTED: general vesicular transport factor p115-like [Meleagris gallopavo] Length = 1003 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 13/75 (17%) Query: 29 YILSLDEKNRILIKKIED-------IRARRNSNSAQIGQAIAEGNL------SLVDALKN 75 + +L E+ L ++++ ++ +N ++ +A E + L Sbjct: 908 EVKALSEEKVSLQQQLDSSSSTVAILQDEKNKLQQEVAEAKKEQDDLLVLLADQDQKLSA 967 Query: 76 ETSTLKEQLPILEKE 90 S LK+ +E E Sbjct: 968 LRSKLKDLGMPVEDE 982 >gi|317057720|ref|YP_004106187.1| chromosome segregation protein SMc [Ruminococcus albus 7] gi|315449989|gb|ADU23553.1| chromosome segregation protein SMC [Ruminococcus albus 7] Length = 1191 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 43/118 (36%), Gaps = 4/118 (3%) Query: 5 QWIRQNPEHLDIAL-KKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSNSAQIGQA- 61 + +R+ E D L K + + I+ + + ++ E ++ARRN S ++ + Sbjct: 758 KKLREKGEQADRDLDKTLKDTAEVDRKIIDKEAELAGSQEEQEKLKARRNEISGELSELR 817 Query: 62 -IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 +A K S L++ + + + + ++ I + I Sbjct: 818 IKGAELAKDTEACKESISNLEKTITDRDSDGGRLTLDIENEKEKIKGKRNDIEFIRQR 875 >gi|297473006|ref|XP_002686296.1| PREDICTED: hypothetical protein LOC783604 [Bos taurus] gi|296489255|gb|DAA31368.1| hypothetical protein LOC783604 [Bos taurus] Length = 624 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 32/93 (34%), Gaps = 6/93 (6%) Query: 6 WIRQNPEHLDIALKK--RHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +R+ ++ R + + +D + L+++ + + + + + Sbjct: 504 LLREKQNEEKQKMEAQERSFKENLAQLQEKMDRERENLLREQQTMLEHKLKMQKE---LL 560 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 EG + L E LKE + EK + Sbjct: 561 TEGFKKEAETLNKEIDKLKEDIQTTEKSFNISD 593 >gi|237713105|ref|ZP_04543586.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409504|ref|ZP_06086046.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|229446763|gb|EEO52554.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352716|gb|EEZ01814.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] Length = 841 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 13/175 (7%) Query: 23 LEPQSEYI----LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN---LSLVDALKN 75 E + D K L +I + S QI A E + K Sbjct: 527 EELDLSELDAMQREADNKVYALQSQISALETENESLIKQIANASVEDAVPLRQKYNENKA 586 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 E LK +L ++++ E+ + ++ S + I + ++ + + Sbjct: 587 EIDRLKPELAAWQQKQEEIAQAKEEAKSDNDVQTDDYYRIPAIMQDCKTAYNITWQDNGS 646 Query: 136 HLSREHFE---IGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHT 187 + I G++ F K++ + RA+ Q DL T Sbjct: 647 WNGYTYVRKGTIPNINGIITFKATLKIARKPKYF---LGIKIHRAILQISWDLAT 698 >gi|126273948|ref|XP_001387354.1| ATP-binding cassette (ABC) family, regulator of translational elongation [Scheffersomyces stipitis CBS 6054] gi|126213224|gb|EAZ63331.1| ATP-binding cassette (ABC) family, regulator of translational elongation [Pichia stipitis CBS 6054] Length = 752 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 26/229 (11%), Positives = 65/229 (28%), Gaps = 26/229 (11%) Query: 18 LKKRHLE-PQSEYILSLDEKNRILIK----------KIEDIRARRNSNSAQIGQAIAEGN 66 + R + P + +L D + L++ ++E +RA S ++ + Sbjct: 263 QEIRGDDTPALQSVLDADVWRKSLLQEEQKINERVNELERLRAEFEEESNEVRKL----- 317 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + + L+ + E+L +E ++ E ++ S R Sbjct: 318 DNEREDLEAHLQEVSEKLYEMESDKAESRAAAILYGLGFTKETQNLPTKQFSGG----WR 373 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 A+ + + E ++D T L+ + L + Sbjct: 374 MRLSLARALFCVPDLLLLDEPSNMLDVPSITFLANYLQGYQSTVLVVSHDRSFLNEVATD 433 Query: 187 TSEHGYTEVSAPLLVRDEAMYGT------GQIPKFADDMFCTTDGRWLI 229 + ++ + T Q ++ + M + I Sbjct: 434 IIHQHSERLDYYRGSNFDSFHSTREERIKNQRREYENQMAYRKHLQEFI 482 >gi|119602167|gb|EAW81761.1| dynein, cytoplasmic 1, heavy chain 1, isoform CRA_c [Homo sapiens] Length = 4236 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3206 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3260 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3261 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3320 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3321 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3379 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3380 EIVNRASLA 3388 >gi|220931102|ref|YP_002508010.1| efflux transporter, RND family, MFP subunit [Halothermothrix orenii H 168] gi|219992412|gb|ACL69015.1| efflux transporter, RND family, MFP subunit [Halothermothrix orenii H 168] Length = 481 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 17/87 (19%) Query: 7 IRQNPEHLDIALK--KRHLEPQSEYILSLDE---------------KNRILIKKIEDIRA 49 +R N E ++LK ++ E D+ L K+ E + Sbjct: 99 LRDNLELARLSLKEASKNYETLVSNFKKQDKINELKLKEARQNLELARLSLNKEKESLEY 158 Query: 50 RRNSNSAQIGQAIAEGNLSLVDALKNE 76 + + +I A + + + K + Sbjct: 159 KLKTLQDKIDDAKKALDEARKEWEKQK 185 >gi|315231626|ref|YP_004072062.1| hypothetical protein TERMP_01864 [Thermococcus barophilus MP] gi|315184654|gb|ADT84839.1| hypothetical protein TERMP_01864 [Thermococcus barophilus MP] Length = 865 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE--GNLSLVDALKNETSTLKEQLPIL 87 + L++ + + + I+ +N +I + E + LK E LKE++ L Sbjct: 154 LEKLEKAWQFMREVIDHFEQIKNDLEKEIAEIGGELRSKSEQREKLKQEIQELKEKIKEL 213 Query: 88 EKEEHEVCSS 97 E+ ++ Sbjct: 214 EQILKKLEHQ 223 >gi|311268205|ref|XP_003131964.1| PREDICTED: rab GTPase-binding effector protein 1-like [Sus scrofa] Length = 369 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|171689762|ref|XP_001909821.1| hypothetical protein [Podospora anserina S mat+] gi|170944843|emb|CAP70955.1| unnamed protein product [Podospora anserina S mat+] Length = 1049 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 40/93 (43%), Gaps = 2/93 (2%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 ALK++ +++ + + ++ L +I+ +R +N Q Q+ + + + L Sbjct: 643 IEALKRKLDSHKADQLAATEKVRTTLQAEIDTLRQEKNIMQTQY-QSYKDAHDQKLKRLT 701 Query: 75 NETS-TLKEQLPILEKEEHEVCSSLKKLISCIP 106 E L +Q E++ + + LI+ + Sbjct: 702 EEHEVALSQQKIDHEQKMQAFHAQCQDLINQVG 734 >gi|169351083|ref|ZP_02868021.1| hypothetical protein CLOSPI_01862 [Clostridium spiroforme DSM 1552] gi|169292145|gb|EDS74278.1| hypothetical protein CLOSPI_01862 [Clostridium spiroforme DSM 1552] Length = 457 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + +FR+E + R +F + EL Sbjct: 170 TAQGIFVNFKNIQRTTRKKVPFGIGQIGKAFRNEI----TPGNFIFRMREFEQMELEFFC 225 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + E ++ LK L + + R +L F + T D+E + Sbjct: 226 KPGTDLEWFEYWKDYCKKFLKDLGIKDENLRFRDHEKEELSFYSKGTCDVEYNFPF--GW 283 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 284 GELWGIADRTDY 295 >gi|254374656|ref|ZP_04990137.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151572375|gb|EDN38029.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 495 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 51/143 (35%), Gaps = 6/143 (4%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNS---AQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 I D K + IE + +RN+ S +I + + + K+E + +L I Sbjct: 105 IAKYDSKRDEIKATIESLIEKRNNVSGIAKKIRKLKYDHK---IAQKKSELKAINTKLDI 161 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 L+ E+ + ++ I+ I + V + + +I + +A + + + + Sbjct: 162 LKDIENGDKAYTEEKITQINTIKNITVNGFKAYSNDITKPVLSHLKAAWNYANKLNYMSY 221 Query: 147 ALGLMDFDRATKLSGARFSVLTG 169 + F A + Sbjct: 222 RNNIEIFWNARLALWNNQYYVNN 244 >gi|123414550|ref|XP_001304511.1| hypothetical protein [Trichomonas vaginalis G3] gi|121885968|gb|EAX91581.1| hypothetical protein TVAG_004210 [Trichomonas vaginalis G3] Length = 1504 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 44/104 (42%), Gaps = 8/104 (7%) Query: 3 DIQWIRQNPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 D+Q ++Q E L ++ ++ ++ E I + +K L E +++ N + + Sbjct: 1012 DLQKLQQEREKLQENMENKNTQMKGDFEKIRANYDK---LKSDYEKLKSDNNQLQKEADE 1068 Query: 61 AIAE--GNLSLVDALKNETSTL-KEQLPILEKEEHEVCSSLKKL 101 + + LK + L K+Q + E + + L+++ Sbjct: 1069 NKQKLDKKEEKIQNLKLQIQNLQKDQSSMKSSEIQRLQNELEQM 1112 >gi|74008133|ref|XP_538144.2| PREDICTED: similar to angiomotin isoform 1 [Canis familiaris] gi|74008135|ref|XP_863732.1| PREDICTED: similar to angiomotin isoform 2 [Canis familiaris] Length = 1085 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ K+ E + A + Sbjct: 492 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQKEKEKLEAELATARS 551 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 552 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 605 >gi|221059281|ref|XP_002260286.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] gi|193810359|emb|CAQ41553.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] Length = 1416 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 52/132 (39%), Gaps = 8/132 (6%) Query: 5 QWIRQNPEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 + + +N E +K+ +E + + S+ R L ++ + + ++ Sbjct: 799 KKMIKNLEEERKKWNKEKKRIESEVDKQRSIIMSKRKLTNEVAMFKNKIKELEEKLTTEK 858 Query: 63 AEGNLS------LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + +S ++ LK E LK +L I ++ ++ + +K I + ++E + Sbjct: 859 KQHKISVEKLRKEIENLKIENEKLKTELKISDEYRSKLENYQQKTIMKLATNVIQEKMVK 918 Query: 117 TSANENILIRSV 128 + + + S Sbjct: 919 NADGKRLPHFSH 930 >gi|14520575|ref|NP_126050.1| chromosome segregation protein smc1 [Pyrococcus abyssi GE5] gi|5457791|emb|CAB49281.1| smc1 chromosome segregation protein [Pyrococcus abyssi GE5] Length = 1177 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 11/126 (8%) Query: 4 IQWIRQ--NPEHLDIALKKRHLEPQSEYI----LSLDEKNRIL---IKKIEDIRARRNSN 54 I+ + + N + + R E L+ + L I+ + A + Sbjct: 363 IKELEEERNKLVVKLGEIDRTFAVAREEFDNVVKELENARKSLYENEADIKRLEAEKERL 422 Query: 55 SAQIGQAIAE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 S++I A+ G V+ L+ + K +L +E + + +K+ + E Sbjct: 423 SSRITILKAKLPGIREEVEKLREKLEEKKAELSNVENKISSISQRRRKVEEELEKKTSEL 482 Query: 113 VPIGTS 118 + + Sbjct: 483 QKVSSE 488 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 I L KR++E + LDE LIK ++++ + G G +AL Sbjct: 306 KINLAKRNIEVAKK---ELDEAQIRLIKAKDELKKVLSEIEKSKGAIARWGKRK--EALL 360 Query: 75 NETSTLKEQ 83 N+ L+E+ Sbjct: 361 NKIKELEEE 369 >gi|163848669|ref|YP_001636713.1| ATP-dependent chaperone ClpB [Chloroflexus aurantiacus J-10-fl] gi|222526605|ref|YP_002571076.1| ATP-dependent chaperone ClpB [Chloroflexus sp. Y-400-fl] gi|163669958|gb|ABY36324.1| ATP-dependent chaperone ClpB [Chloroflexus aurantiacus J-10-fl] gi|222450484|gb|ACM54750.1| ATP-dependent chaperone ClpB [Chloroflexus sp. Y-400-fl] Length = 861 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 14/112 (12%) Query: 1 MLDIQWIRQNP------EHLDIALKKRHLEPQSEYILSLDE-KNR--ILIKKIEDIRARR 51 ML ++I + +D A + +E S+ LD+ K R L + E +R + Sbjct: 377 MLSDRYISDRFLPDKAIDLIDEAAARLRMEITSDP-QELDDLKRRIMQLEIEREALRKEK 435 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + S + E + L+ + S L+ Q+ +E + +K+ Sbjct: 436 DQASKE----RLEKLEQELANLREQRSALEAQIQRERQELERIQQLKEKIEQ 483 >gi|157165489|ref|YP_001467343.1| transaldolase [Campylobacter concisus 13826] gi|112801941|gb|EAT99285.1| peptidase, M23/M37 family [Campylobacter concisus 13826] Length = 405 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 8/93 (8%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA-RRNSNS-----A 56 D + + +N E +K + + I S + R ++ + + ++N+ + Sbjct: 150 DFKRLSENYEDTIEKIKNK--SSKINEINSSIKNYRRKQNDLQSLESTQKNTINGLKRDK 207 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 +I + D L+ L ++ Sbjct: 208 EIYSKKLAKLQAQQDELRKTLEQLAIMQKQEDE 240 >gi|325297685|ref|YP_004257602.1| hypothetical protein Bacsa_0533 [Bacteroides salanitronis DSM 18170] gi|324317238|gb|ADY35129.1| UPF0365 protein [Bacteroides salanitronis DSM 18170] Length = 334 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 14/87 (16%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + ++ L+ + ILS+D I I+ ++ + + Sbjct: 193 KSVLENPDSISKLVLRKGLDAGTAFEILSID------IADIDIGRNIGAALQMDQANADK 246 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQ 83 I QA AE ++ AL+ E E+ Sbjct: 247 NIAQAKAEERRAMAVALEQEMKAKAEE 273 >gi|312214858|emb|CBX94812.1| predicted protein [Leptosphaeria maculans] Length = 486 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 3/79 (3%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIR---ARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 ++E + LD++ R L +E +R +I E + L+ E S L Sbjct: 160 NVKAEELDLLDQELRNLQVTVEKTETWTQKRARLEKKIKDIEGESAGARAQTLQAEASRL 219 Query: 81 KEQLPILEKEEHEVCSSLK 99 + + E+E + + + Sbjct: 220 ELDIRQKEQELWTLKNQHR 238 >gi|303257688|ref|ZP_07343700.1| ATP-dependent chaperone protein ClpB [Burkholderiales bacterium 1_1_47] gi|331000598|ref|ZP_08324260.1| ATP-dependent chaperone protein ClpB [Parasutterella excrementihominis YIT 11859] gi|302859658|gb|EFL82737.1| ATP-dependent chaperone protein ClpB [Burkholderiales bacterium 1_1_47] gi|329571196|gb|EGG52898.1| ATP-dependent chaperone protein ClpB [Parasutterella excrementihominis YIT 11859] Length = 865 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 10/96 (10%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSA--------QIGQ 60 + +D A + +E S E + LD + L + E ++ ++ S +I + Sbjct: 391 IDLIDEAAARIKMEIDSKPEELDKLDRRLIQLKIEREAVKKEKDEASKKRLSGLEEEIAK 450 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCS 96 E + K + + L + E ++ + Sbjct: 451 LSREYSDLEEIWKKEKNAALGSKEVRDEIDKLKTKM 486 >gi|260786143|ref|XP_002588118.1| hypothetical protein BRAFLDRAFT_124948 [Branchiostoma floridae] gi|229273276|gb|EEN44129.1| hypothetical protein BRAFLDRAFT_124948 [Branchiostoma floridae] Length = 1232 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 + +L E+ + L + + +RA+RN A+ E + LK E L Sbjct: 560 VARLRALQERAKDLQAEKDALRAKRNQEQAEREWRKKEREEA---RLKAEMEEL 610 >gi|118497846|ref|YP_898896.1| hypothetical protein FTN_1261 [Francisella tularensis subsp. novicida U112] gi|194323819|ref|ZP_03057595.1| proteasome/cyclosome repeat domain protein [Francisella tularensis subsp. novicida FTE] gi|82452961|gb|ABB76141.1| 53-kDa secreted protein [Francisella novicida] gi|118423752|gb|ABK90142.1| protein of unknown function [Francisella novicida U112] gi|194322183|gb|EDX19665.1| proteasome/cyclosome repeat domain protein [Francisella tularensis subsp. novicida FTE] Length = 495 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 51/143 (35%), Gaps = 6/143 (4%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNS---AQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 I D K + IE + +RN+ S +I + + + K+E + +L I Sbjct: 105 IAKYDSKRDEIKATIESLIEKRNNVSGIAKKIRKLKYDHK---IAQKKSELKAINTKLDI 161 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 L+ E+ + ++ I+ I + V + + +I + +A + + + + Sbjct: 162 LKDIENGDKAYTEEKITQINTIKNITVNGFKAYSNDITKPVLSHLKAAWNYANKLNYMSY 221 Query: 147 ALGLMDFDRATKLSGARFSVLTG 169 + F A + Sbjct: 222 RNNIEIFWNARLALWNNQYYVNN 244 >gi|4590326|gb|AAD26530.1|AF083327_1 101 kDa heat shock protein [Zea mays] Length = 582 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 2/91 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 64 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKARLIEVRKELDD 123 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 L D L+ T +++ +++ + Sbjct: 124 LRDKLQPLTMKYRKEKERIDEIRKLKQRREE 154 >gi|319649342|ref|ZP_08003500.1| hypothetical protein HMPREF1013_00104 [Bacillus sp. 2_A_57_CT2] gi|317398976|gb|EFV79656.1| hypothetical protein HMPREF1013_00104 [Bacillus sp. 2_A_57_CT2] Length = 715 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 8/141 (5%) Query: 21 RHLEPQSEYILSLD---EKNRILIKKIEDIRARRNSNSAQIGQAIAEGN-----LSLVDA 72 R + + + LS D + R L+++ E + +++N A I Q E ++ Sbjct: 9 RRILKEIDRFLSNDLAGDIERALLQEKEALLSKKNELQAIIVQEEKEKERQLGLRDQLEK 68 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 K + L + + LE E L+ +E +++ Sbjct: 69 TKEKIENLSKDVESLESFNREKSLHLENKRVKQEKEKQKEAFESVQKELANEHQTIIDLQ 128 Query: 133 SAIHLSREHFEIGEALGLMDF 153 + +++ + + Sbjct: 129 EKWSQTYLEWKLSAEQNIKEI 149 >gi|256750714|ref|ZP_05491599.1| SMCs flexible hinge domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256750297|gb|EEU63316.1| SMCs flexible hinge domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 723 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 43/102 (42%), Gaps = 2/102 (1%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTL 80 L+P+ + I E+ L K+I+ ++ ++ +IGQ I + ++ L E S + Sbjct: 198 LKPKLQSIFKRKEEITKLKKEIDSLKNQQEIVGEEIGQKINDKIHEEEQIELLNKEISDI 257 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + ++ + + L++ + N LE + + Sbjct: 258 SYNITSNDQRRISLEKEIGNLLNQLENYTLEIDELKENVRNY 299 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 35/110 (31%), Gaps = 11/110 (10%) Query: 2 LDIQWIRQNPEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ RQ + + K+++++ ++L + L +I ++ I Sbjct: 364 HNLKDKRQEFDREKNNIVEKEKNIKEIESLKVNLSLEREKLQGEIYKLQQEVEKIQKDIS 423 Query: 60 QAIA---------EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + L+ E + + E+ +E E + Sbjct: 424 SLEDNIFQEEEDLQKRKEKFSILQQEFTNINEEFHKVEMEMQRFQIEIDN 473 >gi|163789501|ref|ZP_02183940.1| peptidase, M48 family protein [Carnobacterium sp. AT7] gi|159875355|gb|EDP69420.1| peptidase, M48 family protein [Carnobacterium sp. AT7] Length = 493 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 55/206 (26%), Gaps = 13/206 (6%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA---------IAEGNLSLVDALKNETS 78 I DE L + ++ + +QI + E + + V+ LK E Sbjct: 48 NKITEQDEALTNLETEKSNLESDITILQSQIDETVLKLHDQEQKLEESKAKVEQLKKEIE 107 Query: 79 TLKEQLPIL----EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 LK+ + E + V + + E + K Sbjct: 108 ALKKLIAQRTDKLENQARSVQTDASASNLIGLLITAESFTDLVGRIGIVNQLVTANKDIV 167 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 + + + + ++ L+ + ++A I ++ TE Sbjct: 168 TEQAIDQASLETNEVKAEAEKIAVEDTKNAIELSKNNLVAQKAEMDDKIVQVAIQYDMTE 227 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMF 220 V ++ + T + Sbjct: 228 EEKNTFVNEQQVIATQTSTLSEEMQK 253 >gi|219847263|ref|YP_002461696.1| ATP-dependent chaperone ClpB [Chloroflexus aggregans DSM 9485] gi|219541522|gb|ACL23260.1| ATP-dependent chaperone ClpB [Chloroflexus aggregans DSM 9485] Length = 861 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 14/112 (12%) Query: 1 MLDIQWIRQNP------EHLDIALKKRHLEPQSEYILSLDEKNRILIK---KIEDIRARR 51 ML ++I + +D A + +E S+ LD+ R +++ + E +R + Sbjct: 377 MLSDRYISDRFLPDKAIDLIDEAAARLRMEITSDP-QELDDLKRRIMQLEIEREALRKEK 435 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + S + E + L+ + S L+ Q+ +E + +K+ Sbjct: 436 DQASKE----RLEKLEQELANLREQRSALEAQIQRERQELERIQQLKEKIEQ 483 >gi|6754834|ref|NP_035033.1| nuclear factor erythroid 2-related factor 3 [Mus musculus] gi|56404675|sp|Q9WTM4|NF2L3_MOUSE RecName: Full=Nuclear factor erythroid 2-related factor 3; Short=NF-E2-related factor 3; Short=NFE2-related factor 3; AltName: Full=Nuclear factor, erythroid derived 2, like 3 gi|4521229|dbj|BAA76289.1| Nrf3 [Mus musculus] gi|13529332|gb|AAH05416.1| Nuclear factor, erythroid derived 2, like 3 [Mus musculus] gi|74228929|dbj|BAE21936.1| unnamed protein product [Mus musculus] gi|148666219|gb|EDK98635.1| nuclear factor, erythroid derived 2, like 3, isoform CRA_a [Mus musculus] Length = 660 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L K E ++ + S I Sbjct: 542 IRDIRRRGKNK-VAAQNCRKRKLDI----ILNLEDDICNLQAKKEALKNEQTQCSKAIDI 596 Query: 61 AIAE 64 + Sbjct: 597 MRQK 600 >gi|326784113|ref|YP_004324506.1| recombination endonuclease subunit [Prochlorococcus phage Syn1] gi|310004845|gb|ADO99236.1| recombination endonuclease subunit [Prochlorococcus phage Syn1] Length = 576 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 11/119 (9%) Query: 7 IRQNPEHLDI-----ALKKRHLEPQSEYILSLDEKNRILIKKIEDIRAR-RNSNSAQ--- 57 IR N E + L K + Q ++L LD+KN+ I K E+ + + Q Sbjct: 177 IRDNREEIKDFDYQVDLIKEKVSIQKSHLLELDKKNKADISKKEEKISELLKDENKQHVF 236 Query: 58 IGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 I + E +D ++ LK+ L K ++ + K+ N Sbjct: 237 IKETSDVIEKLNEQIDEYSTSSNKLKKLNTFLIKLSSKLQTCQKEHQFFEKNHVCPTCT 295 >gi|331243494|ref|XP_003334390.1| hypothetical protein PGTG_16259 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309313380|gb|EFP89971.1| hypothetical protein PGTG_16259 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1543 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 19/170 (11%), Positives = 51/170 (30%), Gaps = 4/170 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNET 77 KR L+ + + + L+ + ++IE ++ R + ++ ++ + E Sbjct: 1144 KRELDLKLDELEKLESEKATQEQEIEQLQNRLSEARDEVESLLSKSQEQQERLQENDKER 1203 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE-NILIRSVGKKPSAIH 136 L + LE + L + + + V + + + + I Sbjct: 1204 EALSDDKEDLEDQLEAANLKLHETEAQLSQVTEARDSMDAEIRALHTQNKESSASSAKIE 1263 Query: 137 LSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 +E E ++ + L+ + T + H Sbjct: 1264 QLQETISKLETENAEYAEQHSSLTAEVRQLKTELERKAH-TIINSEKSYH 1312 >gi|205375077|ref|ZP_03227868.1| peptidase M23B [Bacillus coahuilensis m4-4] Length = 442 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 2/82 (2%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQI--GQAIAEGNLSLVDALKNETSTLKEQLPI 86 I + K K ED+ A+ NS QI E + ++ E LK ++ + Sbjct: 52 QISEKENKISENQSKQEDLVAQINSLDKQITDTNTKIEEKNAEIEETNKEIEKLKAEIEV 111 Query: 87 LEKEEHEVCSSLKKLISCIPNV 108 L+ + E + LK+ + Sbjct: 112 LKVKIAERDALLKERARSVQQN 133 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 7/75 (9%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG- 65 I + + K E I SLD++ KIE+ A + +I + AE Sbjct: 53 ISEKENKISENQSK--QEDLVAQINSLDKQITDTNTKIEEKNAEIEETNKEIEKLKAEIE 110 Query: 66 ----NLSLVDALKNE 76 ++ DAL E Sbjct: 111 VLKVKIAERDALLKE 125 >gi|145491423|ref|XP_001431711.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124398816|emb|CAK64313.1| unnamed protein product [Paramecium tetraurelia] Length = 774 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 2/90 (2%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 + LK + + + + L E+N L + ED++ R N QI Q L L Sbjct: 383 VAEQLKDDNEKLN-QEVDQLHEENDKLQNENEDLKNRLNDLLRQI-QDKDNKLKDLQTDL 440 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + LK+ L++ ++ + Sbjct: 441 NKKNQELKDFSNKLKEANDKIQWIKNEFGL 470 >gi|94730353|sp|P46660|AINX_MOUSE RecName: Full=Alpha-internexin; Short=Alpha-Inx; AltName: Full=66 kDa neurofilament protein; Short=NF-66; Short=Neurofilament-66 Length = 504 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 146 ELRELRAQLEEASSA 160 >gi|148539957|ref|NP_666212.3| alpha-internexin [Mus musculus] gi|17390900|gb|AAH18383.1| Ina protein [Mus musculus] Length = 501 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 146 ELRELRAQLEEASSA 160 >gi|27923756|sp|Q9PTD7|CING_XENLA RecName: Full=Cingulin Length = 1360 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 40/90 (44%), Gaps = 8/90 (8%) Query: 9 QNPEHLDIA------LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--Q 60 ++ + + +++++ S+ LSL+ + + + + + +++ +S +I + Sbjct: 600 KDLDRVREQYQNDMQQLRKNMDNVSQDQLSLESERQKINQVVRNLQRELEESSDEISQWK 659 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKE 90 + + N + + K E +K + E E Sbjct: 660 EMFQKNKEELRSTKQELLQMKLEKEESEDE 689 >gi|148237354|ref|NP_001081970.1| cingulin [Xenopus laevis] gi|6636514|gb|AAF20208.1|AF207901_1 cingulin [Xenopus laevis] Length = 1368 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 40/90 (44%), Gaps = 8/90 (8%) Query: 9 QNPEHLDIA------LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--Q 60 ++ + + +++++ S+ LSL+ + + + + + +++ +S +I + Sbjct: 608 KDLDRVREQYQNDMQQLRKNMDNVSQDQLSLESERQKINQVVRNLQRELEESSDEISQWK 667 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKE 90 + + N + + K E +K + E E Sbjct: 668 EMFQKNKEELRSTKQELLQMKLEKEESEDE 697 >gi|322377188|ref|ZP_08051680.1| proline--tRNA ligase [Streptococcus sp. M334] gi|321281901|gb|EFX58909.1| proline--tRNA ligase [Streptococcus sp. M334] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|315427010|dbj|BAJ48627.1| glycyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] Length = 481 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 52/147 (35%), Gaps = 13/147 (8%) Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG--DLGFSACKTYDLEV 339 + E ++ R +S +++ +++ + S LG Y E Sbjct: 242 ERVEKITCERAVESGLVSSWLVAYYLWLVQDFYFRLGIGSDRLRFRRLGDDEKAFYAAEA 301 Query: 340 W---LAGQNLYREISSCSTCGNF----QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 W + + E+ +C+ ++ R R H + + V R Sbjct: 302 WDLEVLTSTGWVELVACNNRTDYDLGGHQRVSGVDLRVTEDGESFLPH-VFELSMGVDRS 360 Query: 393 LIAILEN-YLNADGS--VTIPTVLRPY 416 L+A+LE+ Y+ +G + + L PY Sbjct: 361 LLALLEHGYVQENGRSVLRLHPALAPY 387 >gi|315427003|dbj|BAJ48621.1| glycyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] gi|315428091|dbj|BAJ49678.1| glycyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] Length = 482 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 52/147 (35%), Gaps = 13/147 (8%) Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG--DLGFSACKTYDLEV 339 + E ++ R +S +++ +++ + S LG Y E Sbjct: 243 ERVEKITCERAVESGLVSSWLVAYYLWLVQDFYFRLGIGSDRLRFRRLGDDEKAFYAAEA 302 Query: 340 W---LAGQNLYREISSCSTCGNF----QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRC 392 W + + E+ +C+ ++ R R H + + V R Sbjct: 303 WDLEVLTSTGWVELVACNNRTDYDLGGHQRVSGVDLRVTEDGESFLPH-VFELSMGVDRS 361 Query: 393 LIAILEN-YLNADGS--VTIPTVLRPY 416 L+A+LE+ Y+ +G + + L PY Sbjct: 362 LLALLEHGYVQENGRSVLRLHPALAPY 388 >gi|307704119|ref|ZP_07641047.1| prolyl-tRNA synthetase [Streptococcus mitis SK597] gi|307622341|gb|EFO01350.1| prolyl-tRNA synthetase [Streptococcus mitis SK597] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|307709960|ref|ZP_07646407.1| prolyl-tRNA synthetase [Streptococcus mitis SK564] gi|307619331|gb|EFN98460.1| prolyl-tRNA synthetase [Streptococcus mitis SK564] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|307710999|ref|ZP_07647421.1| prolyl-tRNA synthetase [Streptococcus mitis SK321] gi|307616961|gb|EFN96139.1| prolyl-tRNA synthetase [Streptococcus mitis SK321] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|307708104|ref|ZP_07644572.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307615889|gb|EFN95094.1| prolyl-tRNA synthetase [Streptococcus mitis NCTC 12261] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|303255041|ref|ZP_07341117.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302597871|gb|EFL64941.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS455] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|301793532|emb|CBW35907.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV104] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|289168683|ref|YP_003446952.1| prolyl-tRNA synthetase [Streptococcus mitis B6] gi|288908250|emb|CBJ23092.1| prolyl-tRNA synthetase [Streptococcus mitis B6] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|296126056|ref|YP_003633308.1| hypothetical protein Bmur_1013 [Brachyspira murdochii DSM 12563] gi|296017872|gb|ADG71109.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563] Length = 1108 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 25/254 (9%), Positives = 74/254 (29%), Gaps = 5/254 (1%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I I + + +++ H +++ + L KN I+ + N + + Sbjct: 787 IDKIIPDLDFDKKGMRELHYGGEADRVFKLQIKNDFTIEVTDSN----NKVLKSLPAPNS 842 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 + + DA K E + +K+ + ++ + + + E+ + Sbjct: 843 KDDKEKADAAKKELTLIKKNIKMITSNQITRLNKVLLNGRKWSYKTFNELFVENPIMNIF 902 Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 ++ + + E F E FD + ++ + Sbjct: 903 ALKLIWGVYDEKNNLIESFRYMEDGSFNTFDEEEYIFEDSLK-NKKNITLVHPIELDDEK 961 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHE 243 + + + + ++ + ++ + + R + +S+ N S E Sbjct: 962 LSKWKTQLSDYEISQPINQLDLLFEEVKEEHIKNNKIISFEDREITAGEIMSMANKMSFE 1021 Query: 244 IIESKSLPLRFTTL 257 +T Sbjct: 1022 RSRDIEDGGSYTYY 1035 >gi|225856022|ref|YP_002737533.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|254782921|sp|C1CIE5|SYP_STRZP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225724634|gb|ACO20486.1| prolyl-tRNA synthetase [Streptococcus pneumoniae P1031] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|225858114|ref|YP_002739624.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|254782917|sp|C1CB39|SYP_STRP7 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|225721841|gb|ACO17695.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 70585] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|194397930|ref|YP_002036964.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|307126481|ref|YP_003878512.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] gi|226701343|sp|B5E6T8|SYP_STRP4 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|194357597|gb|ACF56045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|306483543|gb|ADM90412.1| prolyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|168492219|ref|ZP_02716362.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|183573637|gb|EDT94165.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|148994606|ref|ZP_01823748.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|168489739|ref|ZP_02713938.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|147927136|gb|EDK78174.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|183571778|gb|EDT92306.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|332075929|gb|EGI86396.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA17570] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|148983669|ref|ZP_01816988.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|147923816|gb|EDK74928.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|301799407|emb|CBW31944.1| prolyl-tRNA synthetase [Streptococcus pneumoniae OXC141] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|149011134|ref|ZP_01832439.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|147764770|gb|EDK71700.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|149006018|ref|ZP_01829747.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|147762374|gb|EDK69335.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|148988004|ref|ZP_01819467.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|148996688|ref|ZP_01824406.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|149001621|ref|ZP_01826594.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|168484646|ref|ZP_02709598.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|168493960|ref|ZP_02718103.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|168576309|ref|ZP_02722192.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|169833273|ref|YP_001693792.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|225860301|ref|YP_002741810.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|237649666|ref|ZP_04523918.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237821366|ref|ZP_04597211.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|298229643|ref|ZP_06963324.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298256044|ref|ZP_06979630.1| prolyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502082|ref|YP_003724022.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] gi|307066942|ref|YP_003875908.1| prolyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|226701344|sp|B1I8Z1|SYP_STRPI RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|254782922|sp|C1CPD8|SYP_STRZT RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|147757263|gb|EDK64302.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|147760079|gb|EDK67068.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|147926468|gb|EDK77541.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|168995775|gb|ACA36387.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|172042164|gb|EDT50210.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|183576158|gb|EDT96686.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|183577873|gb|EDT98401.1| prolyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|225727194|gb|ACO23045.1| prolyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298237677|gb|ADI68808.1| proline--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] gi|301801205|emb|CBW33879.1| prolyl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|306408479|gb|ADM83906.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|327390681|gb|EGE89021.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA04375] gi|332077566|gb|EGI88027.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41301] gi|332202178|gb|EGJ16247.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA41317] gi|332203430|gb|EGJ17497.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47368] gi|332204272|gb|EGJ18337.1| prolyl-tRNA synthetase [Streptococcus pneumoniae GA47901] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|15900198|ref|NP_344802.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|81855097|sp|Q97SR1|SYP_STRPN RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|14971734|gb|AAK74442.1| prolyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|15902287|ref|NP_357837.1| prolyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|116515963|ref|YP_815764.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39] gi|81845175|sp|Q8DRB0|SYP_STRR6 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|122279350|sp|Q04MI4|SYP_STRP2 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|15457791|gb|AAK99047.1| Prolyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|116076539|gb|ABJ54259.1| prolyl-tRNA synthetase [Streptococcus pneumoniae D39] Length = 617 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 224 >gi|111658322|ref|ZP_01409011.1| hypothetical protein SpneT_02000512 [Streptococcus pneumoniae TIGR4] Length = 612 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 63 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 122 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 123 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 178 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 179 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWV 219 >gi|297839711|ref|XP_002887737.1| hypothetical protein ARALYDRAFT_895740 [Arabidopsis lyrata subsp. lyrata] gi|297333578|gb|EFH63996.1| hypothetical protein ARALYDRAFT_895740 [Arabidopsis lyrata subsp. lyrata] Length = 326 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 46/115 (40%), Gaps = 18/115 (15%) Query: 12 EHLDIALKKRHLEPQSEY---------ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 E + K ++ E S+ + L+++ L ++ E ++ + +++ A Sbjct: 139 EKAKESEKTKNDELASKEDQINVLKARLYDLEKERVSLGQENEGLKNQLKKTDSEMSSAK 198 Query: 63 AEGNL---------SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 A+ + ++ T+ LK++L +E+ + + + +KKL Sbjct: 199 AKEDEIASKVSQIGEELEESNETTAKLKKKLESVEEAKESLEAEMKKLKVQTEQW 253 >gi|289434571|ref|YP_003464443.1| DNA topoisomerase IV, A subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170815|emb|CBH27357.1| DNA topoisomerase IV, A subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 819 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 9/92 (9%) Query: 2 LD--IQWIRQNPEHLDIALKKR----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR + + D L + E Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTTYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI LV LK E S +K++ Sbjct: 448 EQISVLEKILGDEAELVAVLKAELSEIKKKYK 479 >gi|115655466|ref|XP_797644.2| PREDICTED: similar to CENTRIOLIN [Strongylocentrotus purpuratus] gi|115972964|ref|XP_001190047.1| PREDICTED: similar to CENTRIOLIN [Strongylocentrotus purpuratus] Length = 2416 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 45/105 (42%), Gaps = 7/105 (6%) Query: 10 NPEHLDIALKKRHLEPQS-----EYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAI 62 + E + L+ R E ++ + I S +N+ + + ++++ R +I Q Sbjct: 1833 DQETVRAQLENRQRELETLTQQKDSIQSRLHQNQEDLVQYDELKNRIQELENEISDQQEK 1892 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 E ++A + +L+E+ +E+E+++ +++ Sbjct: 1893 GEKLKDELEAARMRVGSLQEEKEAIEREKNQSDQENEQIRMKWSG 1937 >gi|242241525|ref|ZP_04795970.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144] gi|242235068|gb|EES37379.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144] gi|319399600|gb|EFV87855.1| peptide chain release factor 1 [Staphylococcus epidermidis FRI909] Length = 358 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 9/88 (10%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 + + +P+ ++ A K R + + + R K E+++ I ++ Sbjct: 15 LNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQ--------DIEDMLS 66 Query: 64 E-GNLSLVDALKNETSTLKEQLPILEKE 90 E + V+ LK E+S LK +LP +E+E Sbjct: 67 ETSDKEEVEMLKEESSALKTELPDMEEE 94 >gi|303284909|ref|XP_003061745.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457075|gb|EEH54375.1| predicted protein [Micromonas pusilla CCMP1545] Length = 621 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 14/113 (12%), Positives = 38/113 (33%), Gaps = 12/113 (10%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA--RRNSNSAQIGQA 61 ++ +RQ + L +L LDE+ R + + +RA + S + + Sbjct: 445 LKRLRQELDERTKNL------VDKRALLQLDEQRRKA--EADKMRAITELEARSQEFLKE 496 Query: 62 IAEGNL--SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 E ++A++++ + + E + + + + Sbjct: 497 KREKRDLEQAIEAMQSQMLGGGDTPQFRAMLQEEHERIRTEYEGKMRELEHDR 549 >gi|188997509|ref|YP_001931760.1| ATPase AAA-2 domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932576|gb|ACD67206.1| ATPase AAA-2 domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 994 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Query: 1 MLDIQWIRQNPE-HLDIALKKRHLEPQSEY-ILSLDEKNRILIKKIEDIRARRNSNSAQI 58 MLD Q I+ + + + K + + E + L K+ K+E+++ + QI Sbjct: 558 MLDEQIIQASLDGDYEKEAKLKIEKANLEKQLKDLKTKSSNERTKLEELQRQLEEIEKQI 617 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 +G+ K + + +++++ L+++ Sbjct: 618 EFYSQKGDYEKEAEYKIKKAQIEKEIKALQQK 649 >gi|148258937|ref|YP_001243522.1| chaperone clpB [Bradyrhizobium sp. BTAi1] gi|146411110|gb|ABQ39616.1| Chaperone clpB [Bradyrhizobium sp. BTAi1] Length = 876 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 17/105 (16%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSA--------QIGQ 60 + +D A + +E S E + +D + L + E ++ + S +I + Sbjct: 407 IDLVDEAASRVRMEADSKPEEVDEIDRRIIQLKIEREALKKETDEASKERLKKVDQEIAE 466 Query: 61 AIAEGN------LSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + + + L +KEQL E V Sbjct: 467 LEKKSADLTSIWKAEKEKL-ASVQKIKEQLDQARSELESVQRRGD 510 >gi|42520334|ref|NP_966249.1| AAA family ATPase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410072|gb|AAS14183.1| ATPase, AAA family [Wolbachia endosymbiont of Drosophila melanogaster] Length = 404 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 15/98 (15%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKI------EDIRARRNSNSAQIGQAI 62 E L + K+ E + L+ + + L KI E+I N IG A Sbjct: 115 NEIEKLIASAAKK------EELNKLNNEVKELKVKIASVATKEEINKLSNEVEKLIGSA- 167 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 ++ LK + ++ + EK + C+ +K Sbjct: 168 --ATKDEMEELKAKIASAATESKTQEKIFMKFCAKGEK 203 >gi|315302928|ref|ZP_07873659.1| DNA topoisomerase IV, A subunit [Listeria ivanovii FSL F6-596] gi|313628701|gb|EFR97103.1| DNA topoisomerase IV, A subunit [Listeria ivanovii FSL F6-596] Length = 819 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 9/92 (9%) Query: 2 LD--IQWIRQNPEHLDIALKKR----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR + + D L + E Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTTYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI LV LK E S +K++ Sbjct: 448 EQISVLEKILGDEAELVAVLKAELSEIKKKYK 479 >gi|147769420|emb|CAN65829.1| hypothetical protein VITISV_038134 [Vitis vinifera] Length = 917 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 1/103 (0%) Query: 40 LIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-ALKNETSTLKEQLPILEKEEHEVCSSL 98 L K+ E + + N +I Q + A + E+ L+ L ++E ++ Sbjct: 808 LKKEKEALEGQVNEVGREILQLKRDTEELWASLAAQKESEDLRAGLAAQKEEMEARFAAQ 867 Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 KK + +E+ + PS + Sbjct: 868 KKEMEEEYQQQADEMYFFVYHCCMKKHGIMHDIPSFPSDEEDS 910 >gi|110623257|emb|CAI94867.2| heat shock protein 101 [Triticum turgidum subsp. durum] Length = 913 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 13/92 (14%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASK-----------A 442 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ E L+++L L+ + + + + Sbjct: 443 RLVDVRKELDDLRDKLQPLQMKYRKEKERIDE 474 >gi|110623255|emb|CAI94866.2| heat shock protein 101 [Triticum turgidum subsp. durum] Length = 913 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 13/92 (14%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASK-----------A 442 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ E L+++L L+ + + + + Sbjct: 443 RLVDVRKELDDLRDKLQPLQMKYRKEKERIDE 474 >gi|6013196|gb|AAF01280.1|AF174433_1 heat shock protein 101 [Triticum aestivum] Length = 913 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 13/92 (14%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASK-----------A 442 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ E L+++L L+ + + + + Sbjct: 443 RLVDVRKELDDLRDKLQPLQMKYRKEKERIDE 474 >gi|6689249|emb|CAB65413.1| M-like protein [Streptococcus dysgalactiae subsp. dysgalactiae] Length = 536 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 13/104 (12%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDI-------RARRN---SNSA 56 +R E K + ++ + LD + + + + + + + R+ S Sbjct: 125 LRDQAEKYSK--KHKEAADLTKKVSELDGELKATLAETKKLSTDLSSAQKERDTAFKVSK 182 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 +I +AE +AL N + L ++L EK + + K+ Sbjct: 183 EIADKLAESEKGKANAL-NVSKELADKLAESEKAKANALNVSKE 225 >gi|325114640|emb|CBZ50196.1| smc2 protein, related [Neospora caninum Liverpool] Length = 826 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 13/92 (14%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIK---KIEDIRARRNSNSAQIGQ 60 +Q +RQ E ++ L KRH E +S R L +ED++ + ++ Sbjct: 298 LQRVRQKKEEVEKLLAKRHSEEKSA--------RRDLKLSSDALEDMKKEEQKLAKKLAD 349 Query: 61 AIAEG--NLSLVDALKNETSTLKEQLPILEKE 90 A S +A + E +KE L I EK+ Sbjct: 350 KRASRLAETSRAEAAEEEMKNMKEALEIAEKK 381 >gi|221041492|dbj|BAH12423.1| unnamed protein product [Homo sapiens] Length = 429 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 194 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 253 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 254 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 298 >gi|121605846|ref|YP_983175.1| ATP-dependent protease La [Polaromonas naphthalenivorans CJ2] gi|120594815|gb|ABM38254.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16 [Polaromonas naphthalenivorans CJ2] Length = 809 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 37/88 (42%), Gaps = 11/88 (12%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNR---ILIKKIED----IRARRNS 53 LD + I + +++ L+ + + + E IL++D+K R + + + + Sbjct: 184 LDAKQIILDLDNVKARLENLYEQLEREVDILNVDKKIRGRVKRQMEKNQRDFYLNEQVKA 243 Query: 54 NSAQIGQAIAEGNLSLVDALKNETSTLK 81 ++G+ + ++ ++ + K Sbjct: 244 IQKELGEG---EEGADIEEIEKKIKAAK 268 >gi|330834360|ref|YP_004409088.1| hypothetical protein Mcup_0497 [Metallosphaera cuprina Ar-4] gi|329566499|gb|AEB94604.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4] Length = 302 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKE 82 + +L ++ L K+++++ ++ N S +I + E +D L + ++++ Sbjct: 195 LKALKDERNKLAKELDELNSQINEKSKEIDELQKQIEAKNKELDELIKKRKSMEQ 249 >gi|296134174|ref|YP_003641421.1| ubiquitin-associated- domain-containing protein [Thermincola sp. JR] gi|296032752|gb|ADG83520.1| ubiquitin-associated- domain-containing protein [Thermincola potens JR] Length = 161 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Query: 8 RQNP--EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR------NSNSAQIG 59 R N AL+K + + E +++L+++N++ K+E + + G Sbjct: 14 RANISYAEAKEALEKCNNDI-VEALIALEKENKVKAYKVEKVESESKYWTAAKKLLKATG 72 Query: 60 QAIAEGNLSLVDALKNE 76 + I +GN + K E Sbjct: 73 KLIKKGNETKFVVKKAE 89 >gi|226330399|ref|ZP_03805917.1| hypothetical protein PROPEN_04317 [Proteus penneri ATCC 35198] gi|225201194|gb|EEG83548.1| hypothetical protein PROPEN_04317 [Proteus penneri ATCC 35198] Length = 87 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 26/84 (30%), Gaps = 3/84 (3%) Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 ++ + + LPLR R+E A G++R F + + EE Sbjct: 7 VQIFKQGLRSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGFTQDDAHIFCTEEQIL 63 Query: 297 TEHERMLSCAEEILKRLDLHYRVV 320 +E + ++ Sbjct: 64 SEVNDCIKLIYDVYSTFGFEKNCC 87 >gi|190345844|gb|EDK37800.2| hypothetical protein PGUG_01898 [Meyerozyma guilliermondii ATCC 6260] Length = 1058 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 50/109 (45%), Gaps = 4/109 (3%) Query: 5 QWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 + +++ + L+ +L +P + I DE+ R + ++++ ++ R +S + Q Q Sbjct: 246 KELKRQRDEAKKKLQNFNLTTQPLEKQIRQTDEQRRDIHEQLDKLKHRHSSLTTQYKQQT 305 Query: 63 AE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 A+ + LK +L + ++E ++ ++L + +VP Sbjct: 306 AQVREATDKITELKASVESLANKSERRKQEAEKLKQERQELEVKLRSVP 354 >gi|220916263|ref|YP_002491567.1| hypothetical protein A2cp1_1156 [Anaeromyxobacter dehalogenans 2CP-1] gi|219954117|gb|ACL64501.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 1324 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 46/161 (28%), Gaps = 11/161 (6%) Query: 33 LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEH 92 L + R L ++ED+R R G+ AE + V L E + + + + Sbjct: 1091 LHPEKRRLEGELEDLRHARAKGEKS-GKGKAEKRFADVSKLLEELTAFIDLVTECAERGP 1149 Query: 93 E---VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE-----HFEI 144 L++ + + V + ++A +L ++ Sbjct: 1150 PPTSPDEPLRERDARYEMDLDDGVMVNSAALWPLLEPQWKDPKKWWKELATANGRKDYDW 1209 Query: 145 GEALGLMDFDRATK--LSGARFSVLTGHLAHLERALGQFMI 183 +R K + +V G L A Sbjct: 1210 AHLAKRYFPERVEKKCVEDPSLAVAHGCFWRLHPAKAYAWE 1250 >gi|148695903|gb|EDL27850.1| RIKEN cDNA 4930563P21, isoform CRA_a [Mus musculus] Length = 343 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 29/240 (12%), Positives = 64/240 (26%), Gaps = 16/240 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R + + + + + E L++KN+ L K + +++ S + + Sbjct: 113 RDDFNEILAQKETALKDLELES-AKLEKKNKTLSKNVMELQ---KKISKGL-----KNIA 163 Query: 68 SLVDALKNETSTLKEQLP-------ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 S + LK + + K +L EKE ++ S + + + Sbjct: 164 SDPETLKKKVTEFKVKLQKSTESCAQQEKEIAKMESDYQSVFQLCEDQAHYIKKYQEILR 223 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 E + V I ++ G + L Sbjct: 224 EMEKEKEVMLLEKEISKAQNDSSQVVKPGSTLVETIQSNMEKNIIKKQKRKFWLRHFRYL 283 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 F + + V + + T + + D + T EV + Sbjct: 284 FFMVMIVIRLLGYVFFHLQYVNPDFLVDTLPMLMSRSSLKWLRDILFPFLTLEVEDVLPH 343 >gi|163839566|ref|YP_001623971.1| DNA repair protein [Renibacterium salmoninarum ATCC 33209] gi|162953042|gb|ABY22557.1| DNA repair protein [Renibacterium salmoninarum ATCC 33209] Length = 569 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 12/83 (14%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA---RRNSNSAQIGQAIAE 64 R+ + A S E+ R ++E +R R + ++ A+AE Sbjct: 148 REALDSFAGA----GFGTDLAEYRSQYERWRTAQTELESLRHAGRERAREAEELTLALAE 203 Query: 65 GNL-----SLVDALKNETSTLKE 82 + + + LK E+ L Sbjct: 204 IDELDPQAAEDEELKAESVKLSN 226 >gi|149641201|ref|XP_001511232.1| PREDICTED: similar to uveal autoantigen with coiled-coil domains and ankyrin repeats [Ornithorhynchus anatinus] Length = 1166 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query: 5 QWIRQNPEHLDIALKK-----RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA--Q 57 Q I+ E D +L R ++ ++ I + D K L+K IE ++ N S Sbjct: 1029 QKIQDQKERCDKSLTTMTDLQRRIQASAKQIEAKDSKITELLKDIERLKQTVNGLSQPTN 1088 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 G+ + ++AL+++ +LK+QL +++ EV ++ + + Sbjct: 1089 AGENPTKKQNQQIEALQHQVKSLKQQLADTDRQHQEVIATYRTHLLSAAQ 1138 >gi|146414948|ref|XP_001483444.1| hypothetical protein PGUG_04173 [Meyerozyma guilliermondii ATCC 6260] Length = 1840 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 23 LEPQSEYILSLDEKNRILIKKI----EDIRARRNSNSAQIGQAIAEGNLS--LVDALKNE 76 ++ E IL L+++ L ++ E++ +R+ NS Q + + N + ++ L E Sbjct: 1613 VDENDEKILELEKEVHKLKEEFEKQREELEKQRDENSKQKDEIAKQKNEALKQIEKLSQE 1672 Query: 77 TSTLKEQLPILEKEEHEVCSSLKK 100 L+ L +E +KK Sbjct: 1673 NDALRADLGAKTEEHKVYYEDVKK 1696 >gi|119602169|gb|EAW81763.1| dynein, cytoplasmic 1, heavy chain 1, isoform CRA_e [Homo sapiens] Length = 3509 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3227 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3281 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3282 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3341 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3342 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 3400 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3401 EIVNRASLA 3409 >gi|114657237|ref|XP_001171934.1| PREDICTED: GRINL1A complex locus protein 1 isoform 5 [Pan troglodytes] Length = 438 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 41/131 (31%), Gaps = 2/131 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQMV 371 Query: 150 LMDFDRATKLS 160 + + ++L Sbjct: 372 EENNELQSRLD 382 >gi|332828409|gb|EGK01118.1| chaperone ClpB [Dysgonomonas gadei ATCC BAA-286] Length = 863 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 29/82 (35%), Gaps = 7/82 (8%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD-----ALKNET 77 L+ +S I L+ + + ++ + ++ + S +I + E + N+ Sbjct: 411 LDEKSRRIKQLEIEREAIRRENDKLKEQ--ELSKEISRLKDEEKDLKAKWQSEREVINKI 468 Query: 78 STLKEQLPILEKEEHEVCSSLK 99 K ++ + E + Sbjct: 469 QQNKIEIENTKFEAEKAEREGD 490 >gi|332306719|ref|YP_004434570.1| hypothetical protein Glaag_2358 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174048|gb|AEE23302.1| hypothetical protein Glaag_2358 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1245 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 K+R+ + E +L+++ + + + + + Q QAIAE + L Sbjct: 663 YAQNAKQRYAD---ELKTALEKRRKQAQDALNSLLEEKQKITQQKAQAIAELKSDFDEQL 719 Query: 74 KN-------ETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 E + L EQ+ LEK+ + ++ I + + Sbjct: 720 LEFKSGWQDELAVLDEQIDALEKQVEQKRQQNREQIKQLED 760 >gi|294142375|ref|YP_003558353.1| hypothetical protein SVI_3604 [Shewanella violacea DSS12] gi|293328844|dbj|BAJ03575.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 1237 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 38/104 (36%), Gaps = 5/104 (4%) Query: 3 DIQWI----RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 D++ + R + ++ AL R + + + LD + + L + ++ + + + Sbjct: 670 DLRRLFDEKRSEQDKINKALSDRKSD-SLKQLSRLDSELKQLKHQHQEWLEEQKEQALED 728 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 +V AL N+ + +K + + ++ Sbjct: 729 RMEKNAYWQEVVGALDNQLNQIKINIQHRRDHAKSEQKACEQWY 772 >gi|240103229|ref|YP_002959538.1| Chromosome segregation protein SMC (smc1) [Thermococcus gammatolerans EJ3] gi|239910783|gb|ACS33674.1| Chromosome segregation protein SMC (smc1) [Thermococcus gammatolerans EJ3] Length = 1192 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 10/100 (10%) Query: 8 RQNPEHLDIAL--KKRHL---EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 R++ + + L K+ + E + E E+ R LI + ++R RN+ I + Sbjct: 388 REDFDRVVKELEEAKKEMYTREAELEKFREEIERQRSLITRA-NLR--RNALKESIAKLK 444 Query: 63 AE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 +E S + + + + ++ ++ EKE E + LKK Sbjct: 445 SEIDEKRSELSNIDGKMARIEARIRKAEKELEEKNAKLKK 484 >gi|194207285|ref|XP_001490944.2| PREDICTED: similar to bromodomain adjacent to zinc finger domain, 1A [Equus caballus] Length = 1601 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 677 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 734 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + V ++ Sbjct: 735 EDEQRNSAADMSVGEEEREDF 755 >gi|196001173|ref|XP_002110454.1| hypothetical protein TRIADDRAFT_22099 [Trichoplax adhaerens] gi|190586405|gb|EDV26458.1| hypothetical protein TRIADDRAFT_22099 [Trichoplax adhaerens] Length = 4324 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 12/112 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR-------NSNSAQIGQAI-- 62 E + +K E I L+ + L + ++ +AR N+ ++ Sbjct: 3104 EWVKANIK---FSIVLEKIEPLETEQNALKRNLDKSQARLDKLVKALNAVDKEVAAMKER 3160 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 E + LK + +E + E ++ K+ + + N+ E Sbjct: 3161 FEKRTTEAAKLKIQLEKAQETIDAAETLVTKLDGEYKRWSTQVTNLTSEMNQ 3212 >gi|268551829|ref|XP_002633896.1| Hypothetical protein CBG19958 [Caenorhabditis briggsae] Length = 567 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 58/150 (38%), Gaps = 13/150 (8%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR---------NSNSAQ 57 +R+ + + ++ R+ E E L E+NR L + E++ + N + + Sbjct: 210 LREENQSIVDEMQLRNDEI-VEENRKLAEENRELKSRYEELEKLKTENSNLLAENKLNQE 268 Query: 58 IGQAIA---EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 I + A E +L + + E LK++L +++ E ++ S +++ + + Sbjct: 269 ISKKFAELQEEKRTLSEISQQEIFDLKKELELVKAENTKLSSEIEQNAEKSAKNHEKLLE 328 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEI 144 E V + +E F + Sbjct: 329 DRVLLLETRYQLEVDDLKKSFETEKEEFRL 358 >gi|255525194|ref|ZP_05392137.1| protein of unknown function DUF1432 [Clostridium carboxidivorans P7] gi|296187447|ref|ZP_06855842.1| hypothetical protein CLCAR_2939 [Clostridium carboxidivorans P7] gi|255511153|gb|EET87450.1| protein of unknown function DUF1432 [Clostridium carboxidivorans P7] gi|296047969|gb|EFG87408.1| hypothetical protein CLCAR_2939 [Clostridium carboxidivorans P7] Length = 330 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 8/79 (10%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKN----RILIKKIEDIRARRNSNSAQIG 59 + + +NP+ + + + L+ + ILS+D + R + +++ ++A I Sbjct: 190 KEVLENPDAISKTVLAKGLDAGTAFEILSIDIADVDVGRNIGAQLQTLQAE---ADKNIA 246 Query: 60 QAIAEGNLSLVDALKNETS 78 QA AE ++ A + E Sbjct: 247 QAKAEERRAMAVAREQEMR 265 >gi|242399807|ref|YP_002995232.1| hypothetical protein TSIB_1832 [Thermococcus sibiricus MM 739] gi|242266201|gb|ACS90883.1| hypothetical protein TSIB_1832 [Thermococcus sibiricus MM 739] Length = 313 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 63/191 (32%), Gaps = 5/191 (2%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 I L+ + + + +++E ++ N I + V L+ + K + + Sbjct: 29 EIEVLEREKKEIKERLEQLQKELN-----IWVQKRDEKNKEVKHLREKAREYKTKRDEVN 83 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 ++ E+ + +++ + + + E + +E +R + I E E Sbjct: 84 QQIQELKKNREEINAKLNLLYQEAMEYRAKRDEYRQLRRLKMPKEKIEERIEKLEWELQT 143 Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 K + VL L L++A T + + A + E Sbjct: 144 NPTITSEREKQIVDQIQVLATELEILQQADRFHKRLQETRKKIESLKRARRAMGLEIQKL 203 Query: 209 TGQIPKFADDM 219 Q +F + M Sbjct: 204 ANQSQQFHEQM 214 >gi|222151464|ref|YP_002560620.1| glycyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] gi|254781879|sp|B9E6V6|SYG_MACCJ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|222120589|dbj|BAH17924.1| glycyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] Length = 462 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIAQVGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + E + A + LK L + L D L + T D+E + Sbjct: 231 KPGTEIEWQEYWKNFAAKWLKDLGIKEENTKLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ ++ +F Sbjct: 289 GELWGIASRTDF 300 >gi|163784702|ref|ZP_02179519.1| hypothetical protein HG1285_12532 [Hydrogenivirga sp. 128-5-R1-1] gi|159880029|gb|EDP73716.1| hypothetical protein HG1285_12532 [Hydrogenivirga sp. 128-5-R1-1] Length = 374 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 50/106 (47%), Gaps = 10/106 (9%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRI---LIKKIEDIRARRNSNSAQIGQ 60 I++ ++ + + ++P+ +Y+L L++ + LI K + + +++ + QI + Sbjct: 57 IKFYKKEGDKVKKGEILAKIDPK-DYVLQLEKIKKEINSLIFKKQALEEKKDRINKQIDK 115 Query: 61 AIA------EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 I + N L D+L ++ + +L L+K+ + + K Sbjct: 116 NIQIVKISLKENKKLQDSLLSQIKGIDSRLSQLKKDRERFLNLVNK 161 >gi|118086071|ref|XP_001235426.1| PREDICTED: similar to LRR FLI-I interacting protein 2 isoform 1 [Gallus gallus] Length = 709 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 15/89 (16%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILI----KKIEDIRARRNSNSAQIGQAIAEGN 66 + L L++R + ++ +++ + I K++ D++ N +IG + + Sbjct: 430 LDELKEGLRQR------DELIEENQRMKQNIDCITKEVFDLQETINWKDKKIGALERQKD 483 Query: 67 -----LSLVDALKNETSTLKEQLPILEKE 90 + D L+ E + LKE + EK Sbjct: 484 YFDCIKNERDELREELADLKETMKRGEKH 512 >gi|111494235|ref|NP_689664.3| GRINL1A combined protein isoform 8 [Homo sapiens] gi|32364134|gb|AAP75897.1| GRINL1A upstream protein 2 precursor [Homo sapiens] gi|34596309|gb|AAQ76834.1| GRINL1A combined protein Gcom9 precursor [Homo sapiens] Length = 438 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 41/131 (31%), Gaps = 2/131 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQMV 371 Query: 150 LMDFDRATKLS 160 + + ++L Sbjct: 372 EENNELQSRLD 382 >gi|86131729|ref|ZP_01050326.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85817551|gb|EAQ38725.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 688 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 9/115 (7%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA-QIGQAIAEG----- 65 +++ L KR E + I D + R I +++ A + +I + Sbjct: 212 QNIKANLIKRDEE---KVIRKQDVEAREAILELDKQLAEKEEQQKREISNIKSREEAEIL 268 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 ++ + LK+ET+ + + + EE+ + + +E + Sbjct: 269 KVAEEERLKSETARIATEEKVKVAEENMQRQIIVAEKNKQRTDKVETERVEKDRM 323 >gi|332235770|ref|XP_003267076.1| PREDICTED: GRINL1A complex locus protein 1 isoform 4 [Nomascus leucogenys] Length = 438 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 41/131 (31%), Gaps = 2/131 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIKHLDDMVHCQQKKVKQMV 371 Query: 150 LMDFDRATKLS 160 + + ++L Sbjct: 372 EENNELQSRLD 382 >gi|327278743|ref|XP_003224120.1| PREDICTED: cytoplasmic dynein 1 heavy chain 1-like [Anolis carolinensis] Length = 4627 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 21/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ + ++ + ++ + + + + K + + Sbjct: 3187 RKIKETVDQVEEL---RRDLRIKSQELEVKNDAANDKLKKMVK--DQQEAEKKKVMSQEI 3241 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P A+ L+ Sbjct: 3242 QEQLHKQQEGIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPGAVKLA 3301 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3302 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYLSNPSYNY 3360 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 3361 EIVNRASLA 3369 >gi|294898242|ref|XP_002776194.1| M protein, serotype 24 precursor, putative [Perkinsus marinus ATCC 50983] gi|239882948|gb|EER08010.1| M protein, serotype 24 precursor, putative [Perkinsus marinus ATCC 50983] Length = 395 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 22/199 (11%), Positives = 52/199 (26%), Gaps = 35/199 (17%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN------------------------- 66 SL+ K R L + + ++A R S Q+ A + Sbjct: 90 SLELKIRQLESERDQLQASRKDLSNQLKTADRKMKALGSANRDIQASMEKSTKEHISVIM 149 Query: 67 --LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + + L+ + L ++L +E + + E + + + Sbjct: 150 AMQNEIAELEKQVKELGKKLAEKTEEHIATQRVVDMFKVEVRKWQGEARKVQQRQVQLVS 209 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 + + + D++ ++ E A + D Sbjct: 210 CSREHELEQERYAAAFKAREEMKDKFRDYNAMHEVDQR--------CLRKEIAQLKQERD 261 Query: 185 LHTSEHGYTEVSAPLLVRD 203 +H + L+ D Sbjct: 262 RMRGQHAEESHRSSKLMSD 280 >gi|237755353|ref|ZP_04583982.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237692484|gb|EEP61463.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 459 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 30/70 (42%), Gaps = 9/70 (12%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I L+++ + L ++++ ++ + S ++ +++K E LK ++ + Sbjct: 22 DKIKILEDQIKHLKEEVQKLKQEQASV-KEV--------KEENESIKEELRKLKIEIAMP 72 Query: 88 EKEEHEVCSS 97 E E Sbjct: 73 ELEVKSYYGM 82 >gi|149040328|gb|EDL94366.1| internexin, alpha [Rattus norvegicus] Length = 506 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 146 ELRELRAQLEEASSA 160 >gi|154418771|ref|XP_001582403.1| viral A-type inclusion protein [Trichomonas vaginalis G3] gi|121916638|gb|EAY21417.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3] Length = 573 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 50/138 (36%), Gaps = 3/138 (2%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN--ETSTLKEQL- 84 + I L+E+NR + + I + N +I ++ S + ++ E + LK++L Sbjct: 114 KRIKELEEENRKYLIENSKISSDINDLQKEIKNLKSQIENSRSEKARSDVEKAELKDKLN 173 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 ++EK+ + +L+ EE S N + + ++ + + Sbjct: 174 KLMEKKIWSDENEQIQLLQQKLTELSEENKKLRSVNNKLSKQMSSNSSTSPVDTSISQIL 233 Query: 145 GEALGLMDFDRATKLSGA 162 + + K Sbjct: 234 TPMSTPRELRKMAKTIEK 251 >gi|126697991|ref|YP_001086888.1| putative cell surface protein [Clostridium difficile 630] gi|115249428|emb|CAJ67243.1| putative cell surface protein Tn1549-like,CTn2-Orf15 [Clostridium difficile] Length = 513 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + I ++++ + L K++ + +++ + + L++E +LKE+ Sbjct: 147 ELSKDDISKIEKEAKELQDKLDKLNCELKDKDK-----LSDKQKNKIKDLEDEIDSLKEK 201 Query: 84 LPILEKEEHEVCSSLKK 100 + + + K+ Sbjct: 202 IKKDKGNKDLSKDMKKE 218 >gi|315579542|gb|EFU91733.1| conserved hypothetical protein [Enterococcus faecalis TX0630] Length = 366 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 15/167 (8%), Positives = 55/167 (32%), Gaps = 9/167 (5%) Query: 5 QWIRQNPE-HLDIALKKRHLEPQSEYILSLDEKNR----ILIKKIEDIRARRNSNSAQIG 59 + I + E +D +K + +++ L E+ + L + + ++A+ + + +I Sbjct: 191 KLIIDSKEFEVDSIVKAKFESLEAK--LDAAEQRKANVEKLEGERDALKAQIDKLNKEID 248 Query: 60 QAIAEGNLSLV--DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +A + + +++ + + L S +++ + + Sbjct: 249 EAKKKEVTADALDKRVQDRVDLINKAQKFLGDSVDFTGKSDREIKESVIAKTSPDFKGDG 308 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 +++ I + + D + A ++ + Sbjct: 309 KSDDYIAAYFDSAVANVEKKGFTNPAAFNDAKDKDKEAAEEIEKQKN 355 >gi|313227485|emb|CBY22632.1| unnamed protein product [Oikopleura dioica] Length = 1107 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 35/123 (28%), Gaps = 27/123 (21%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKN-------------RILIKKIEDIRARRNSNS 55 NP L + R + E I L+ + + ++ ++ R+ Sbjct: 543 NNPHLLRAKYE-RQVTELQEKIEKLENERQASVAAKTHVAKDKSKQNEVMRMK-RQKELE 600 Query: 56 AQIGQAIAEGNLSL------------VDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 +I Q + V+ LKNE LK++ L K+ Sbjct: 601 KEIAQLKKDKKEKERLVKEKREKEQFVEKLKNELEDLKKRKINLVKKARSDQKKFSDEEK 660 Query: 104 CIP 106 Sbjct: 661 KFK 663 >gi|301614285|ref|XP_002936622.1| PREDICTED: cytoplasmic dynein 1 heavy chain 1 isoform 1 [Xenopus (Silurana) tropicalis] Length = 4644 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 21/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3204 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3258 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL + + S+K+ + + +E + + ++++ P+A+ L+ Sbjct: 3259 QEQLHKQQAIIADKQMSVKEDLDQVEPAVIEAQNAVSSIKRHHLVEVKAMANPPAAVKLA 3318 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + + D+ + + ++ + L + + + Sbjct: 3319 LESICLLLGEEMTDWKKIRTVFLRDN-FISNIINFNTEDLSDAIREKMKKNYLSNPSFNY 3377 Query: 199 LLVRDEAMY 207 LV ++ Sbjct: 3378 ELVNRASLA 3386 >gi|260577287|ref|ZP_05845260.1| ATP-dependent chaperone ClpB [Rhodobacter sp. SW2] gi|259020468|gb|EEW23791.1| ATP-dependent chaperone ClpB [Rhodobacter sp. SW2] Length = 870 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 13/84 (15%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A + +E S E + +LD + L + E ++ ++ S Sbjct: 390 IDLVDEAASRLRMEVDSKPEELDALDRQILQLQIEAEALKKEEDAASK-----------D 438 Query: 69 LVDALKNETSTLKEQLPILEKEEH 92 ++ L+ E S L E+ + + Sbjct: 439 RLEKLQKELSDLLERSSEMTAKWQ 462 >gi|188997331|ref|YP_001931582.1| hypothetical protein SYO3AOP1_1426 [Sulfurihydrogenibium sp. YO3AOP1] gi|188932398|gb|ACD67028.1| hypothetical protein SYO3AOP1_1426 [Sulfurihydrogenibium sp. YO3AOP1] Length = 361 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 1/78 (1%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 D+K R L K++E ++ +I + L+ E L ++ + + Sbjct: 271 DKKQR-LQKEMEQLKNELKDLQKKIKTTKNPEKKEDYELLEEEAKILLQRAERNYQIALK 329 Query: 94 VCSSLKKLISCIPNVPLE 111 L K I N + Sbjct: 330 NEERLSKEKLEIENKLND 347 >gi|9506811|ref|NP_062001.1| alpha-internexin [Rattus norvegicus] gi|1703221|sp|P23565|AINX_RAT RecName: Full=Alpha-internexin; Short=Alpha-Inx gi|204964|gb|AAA41444.1| alpha-internexin [Rattus norvegicus] Length = 505 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 146 ELRELRAQLEEASSA 160 >gi|300871571|ref|YP_003786444.1| repair and genetic recombination protein [Brachyspira pilosicoli 95/1000] gi|300689272|gb|ADK31943.1| repair and genetic recombination protein [Brachyspira pilosicoli 95/1000] Length = 575 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 9/97 (9%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ I + L L E IL L E +IE+IR + + + +I Sbjct: 319 NIKEIINYAKEAKEKLDS--LNFSEEDILKLKE-------EIENIRTKTSVLAKEISDIR 369 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 ++A++ E L + E Sbjct: 370 KSKKDVFINAIEKEMCDLGMTSTKFDVEITYDEDDED 406 >gi|20807458|ref|NP_622629.1| glycyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|59798595|sp|Q8RB46|SYG_THETN RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|20515983|gb|AAM24233.1| Glycyl-tRNA synthetase, class II [Thermoanaerobacter tengcongensis MB4] Length = 461 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 9/135 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + + L L + R +L + T D+E + Sbjct: 231 KPGEDMEWFNYWRQFCMDWLVEFGLKRENLRFRDHKKEELSHYSTATTDIEYNFPF--GW 288 Query: 348 REISSCSTCGNFQSR 362 E+ + ++ R Sbjct: 289 GELWGIANRTDYDLR 303 >gi|324504838|gb|ADY42086.1| JNK-interacting protein [Ascaris suum] Length = 545 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 54/154 (35%), Gaps = 19/154 (12%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAI 62 I++N E L+ ++ +L+ LI +++++ + ++ +I + + Sbjct: 7 NLIKENTEL----LETKN---------ALNIVKNDLIARVDELSSEQDILREEIRSLEMV 53 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEK---EEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + L+ E LKE++ + E+ + + + V +E Sbjct: 54 RTKMSERIKELETEVRELKEKIEAKSEEDGEDVPMAQRKRFTRLEMARVLMERNQYKERL 113 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 E + A ++ H G+ DF Sbjct: 114 MELQDAMKWTEMQRAKRMNAMHASKKG-GGIWDF 146 >gi|313229721|emb|CBY18536.1| unnamed protein product [Oikopleura dioica] Length = 1991 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 48/160 (30%), Gaps = 8/160 (5%) Query: 11 PEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 E L K R + + I L ++N+ L + D + + + + A+G Sbjct: 1772 LEDFKKTLEAKARDIAELEQEIEELKDENKELKVEAYDAQNYKKKFKKTVDEKHAQGQDL 1831 Query: 69 LV-----DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 D L + LK++L E + + + + Sbjct: 1832 EELTTLYDQLLLKNDELKQKLARCRNELELLQEPYDQKLFENAQNSNRRLSDSLLIRIPS 1891 Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 + K I + +E + +D + +S + Sbjct: 1892 PEGRMLKNNDEIFVDQEKLS-QQKRDPVDDNALWNISKMK 1930 >gi|148681214|gb|EDL13161.1| mCG6218 [Mus musculus] Length = 1678 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 43/116 (37%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L + +R L+ I + +++ + L ++ E+ Sbjct: 487 LEIKSLKEEIEKLRKQVAEVNHLEQQLEEANSVRRELDDAFRQIKASEKQIKTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|2905649|gb|AAC03547.1| cytoplasmic linker protein CLIP-170 [Gallus gallus] Length = 1099 Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 29/82 (35%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 +L +E + KK +++ + Q QA A+ V + + K+ + + Sbjct: 1000 NLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEK 1059 Query: 89 KEEHEVCSSLKKLISCIPNVPL 110 E + ++ + N Sbjct: 1060 IETLASLENSRQTNEKLQNELD 1081 >gi|326436955|gb|EGD82525.1| heat shock protein [Salpingoeca sp. ATCC 50818] Length = 892 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 17/96 (17%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIED--IRARRNSNSAQIGQAIAEGN 66 + +D A K ++ S E I +L + R L ++E + ++ S Q Sbjct: 391 IDLVDEACAKTRVQLDSRPEEIDAL--ERRKLQLEVEATALGKEKDKMSKQ--------- 439 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 + +K + + ++EQL L+ + + ++ Sbjct: 440 --RLKEVKKQLADIEEQLGPLKMKFEMERGRVDEMR 473 >gi|321262248|ref|XP_003195843.1| topoisomerase I [Cryptococcus gattii WM276] gi|317462317|gb|ADV24056.1| topoisomerase I [Cryptococcus gattii WM276] Length = 885 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 50/159 (31%), Gaps = 24/159 (15%) Query: 8 RQNPEHLDIALKKRHLEPQSEYIL------------SLDEKNRILIKKIEDIRARRNSNS 55 R E LD AL+ + ++ + LDE+ + + ++++ R Sbjct: 736 RHEAELLDKALENAKKKWDTDNVKLEGDGKKKKTKGELDERLNEIKAEFKELKKERK--- 792 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + I + + L + S + E++ + + + + + + + I Sbjct: 793 ---AKKIDPKRSATEEKLLAQISKIDERIATAKVQLQD-----RDKLKDVALGTSKINYI 844 Query: 116 GTS-ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 V + RE F EA D+ Sbjct: 845 DPRLTVAWAKKFDVPLEKLFSKTLREKFPWAEAEAGPDW 883 >gi|315924009|ref|ZP_07920236.1| glycyl-tRNA synthetase beta subunit [Pseudoramibacter alactolyticus ATCC 23263] gi|315622635|gb|EFV02589.1| glycyl-tRNA synthetase beta subunit [Pseudoramibacter alactolyticus ATCC 23263] Length = 461 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 13/190 (6%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 + F+ D H + E + + M+ T Q T+ T+ Sbjct: 120 WSNEKMEAFIQDHHIACPDCGESDFTEIRQFNLMFKTFQGVTED----STSQLYLRPETA 175 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + + K +P + SFR+E + R +F + EL + Sbjct: 176 QGIFVNFKNAQRTTRKRVPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFCKP 231 Query: 293 EDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 L L + + R +L + T D+E + E Sbjct: 232 GTDLEWFTYWKDYCRSWLFSLGMKEENLRFRDHSPEELSHYSNATTDVEYQFPF--GWGE 289 Query: 350 ISSCSTCGNF 359 + + +F Sbjct: 290 LWGIADRTDF 299 >gi|297696741|ref|XP_002825537.1| PREDICTED: GRINL1A complex locus protein 1-like isoform 2 [Pongo abelii] Length = 438 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 41/131 (31%), Gaps = 2/131 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQMV 371 Query: 150 LMDFDRATKLS 160 + + ++L Sbjct: 372 EENNELQSRLD 382 >gi|297816760|ref|XP_002876263.1| hypothetical protein ARALYDRAFT_323999 [Arabidopsis lyrata subsp. lyrata] gi|297322101|gb|EFH52522.1| hypothetical protein ARALYDRAFT_323999 [Arabidopsis lyrata subsp. lyrata] Length = 1257 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 8/57 (14%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 + + L+++ R +I++I+ I+ S I + + + ++ L+ + + +++ Sbjct: 747 DKLPQLEQEKRNIIEEIDRIKPE---LSKAIAKTEVDKRKTEMNKLEKRMNEIVDRI 800 >gi|221487281|gb|EEE25513.1| structural maintenance of chromosomes 6 smc6, putative [Toxoplasma gondii GT1] Length = 1966 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAIAEGNLSLVDALKNET 77 +R ++ + I +L+++ + L K+ ++A+R ++ A A K Sbjct: 1663 RRRIDENAREIEALEKRQKSLEKERRSLQAQREEGEKRLAAHAAERAEKEKEAIAAKKHA 1722 Query: 78 STLKEQLPILEKEEH 92 L+ +L +E Sbjct: 1723 EGLELRLEEFVREHF 1737 >gi|294657904|ref|XP_460208.2| DEHA2E20834p [Debaryomyces hansenii CBS767] gi|199433038|emb|CAG88481.2| DEHA2E20834p [Debaryomyces hansenii] Length = 801 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 9/132 (6%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R E + + I LD + + ++E +R + Q + Sbjct: 322 IDLVDEACSTLRLQHESKPDAIAQLDRQIMTIQIELESLR-------KEDDQLSLDRKTK 374 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 L + L +++ LK+ E E+ + E Sbjct: 375 LEEELNVKSAELKDFTEKWESEKKSIDDVKNAKTDLEQAKFDLEQCQREGNYGKASELQY 434 Query: 129 GKKPSAIHLSRE 140 P +E Sbjct: 435 ATIPKLEEQLKE 446 >gi|156839113|ref|XP_001643251.1| hypothetical protein Kpol_1063p3 [Vanderwaltozyma polyspora DSM 70294] gi|156113853|gb|EDO15393.1| hypothetical protein Kpol_1063p3 [Vanderwaltozyma polyspora DSM 70294] Length = 317 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 40/106 (37%), Gaps = 10/106 (9%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILS-------LDEKNRILIKKIEDIRARRNSNSAQIG 59 + N E + + + ++L+ + + LDE+ R + + A + +I Sbjct: 183 FKNNNEQIARSCRNKYLKSDTNSLNKIKKRKLVLDEERRAYLLEKNRAAASKCRRKKKIE 242 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 + + + V + E LK ++ EK E L++ + Sbjct: 243 ELQLK---TDVARMSKENIFLKNRIQYYEKWMVEFQIFLREHLKSC 285 >gi|34596299|gb|AAQ76829.1| GRINL1A complex protein Gcom6 precursor [Homo sapiens] Length = 415 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 41/131 (31%), Gaps = 2/131 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 221 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 280 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 E H++ L + + + + E + + + + + Sbjct: 281 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQMV 340 Query: 150 LMDFDRATKLS 160 + + ++L Sbjct: 341 EENNELQSRLD 351 >gi|21227133|ref|NP_633055.1| chromosome partition protein [Methanosarcina mazei Go1] gi|20905464|gb|AAM30727.1| Chromosome partition protein [Methanosarcina mazei Go1] Length = 1175 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 9/75 (12%) Query: 20 KRHLEPQSEYILSLDEKNRI-------LIKKIEDIRARRNSNSAQIGQA--IAEGNLSLV 70 + + E I LD + R L + E + N I + V Sbjct: 805 NKKADFVDEEIRRLDGRMRDTEASLNALQLEKEYAEQKINEAKELIKELDEKKASRRERV 864 Query: 71 DALKNETSTLKEQLP 85 D+LK + + L+ QL Sbjct: 865 DSLKAKITELEAQLE 879 >gi|150014998|ref|YP_001307252.1| glycyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|254781874|sp|A6LPL6|SYG_CLOB8 RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|149901463|gb|ABR32296.1| glycyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 463 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 53/184 (28%), Gaps = 10/184 (5%) Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP-TSEVSLTN 238 + + + + + F +L P T++ N Sbjct: 124 NEQLKEYIERNNIVCPKCGKMNYTDIRKFNLMFKTFQGVTEDAKSEMYLRPETAQGIFVN 183 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + K +P + SFR+E R +F + EL + Sbjct: 184 FKAVQRTSRKKVPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKPGTDLEW 239 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLYREISSCST 355 H+ L L++ + + +L F + T D+E + E+ + Sbjct: 240 HKYWKDYCWNFLLNLNVKAENLRMRDHGEEELSFYSNATSDIEYLFPF--GWGELWGIAD 297 Query: 356 CGNF 359 ++ Sbjct: 298 RTDY 301 >gi|332797961|ref|YP_004459461.1| homologous recombination repair protein Rad50 [Acidianus hospitalis W1] gi|332695696|gb|AEE95163.1| Rad50, homologous recombination repair enzyme [Acidianus hospitalis W1] Length = 863 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 48/119 (40%), Gaps = 17/119 (14%) Query: 7 IRQNPEHLDIA-----------LKKRHLEPQSE-YILSLDEKNRILIKKIEDIRARRNSN 54 I +N E++ ++ ++ ++E + +++K + KK+E++RAR+ Sbjct: 413 IIKNLENIKENRCPVCGRELTEEHRKKIKIEAETEVKDIEKKLSDIEKKVEELRARKGEL 472 Query: 55 SAQ----IGQAIAEGN-LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 S I + + + E ++ +L LEK +E +KL P Sbjct: 473 SNLRLEIISKLTKLRKLNEDLTRISQEVQDIQTKLKELEKSYNEYSEIREKLTLLEPKY 531 >gi|311069988|ref|YP_003974911.1| secreted cell wall DL-endopeptidase [Bacillus atrophaeus 1942] gi|310870505|gb|ADP33980.1| secreted cell wall DL-endopeptidase [Bacillus atrophaeus 1942] Length = 471 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 37/104 (35%), Gaps = 11/104 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA------I 62 + E ++ + E S ++ K + L ++++ +++ +I Sbjct: 31 ETLEDKKQQIESKQSEVDSN----IEAKEKEL-TELQNNQSKIEKELKEINAKALDTSNK 85 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 E D K E LK+++ E + LKK + + Sbjct: 86 VEDKKEENDKTKKEIKALKKEIKETEARIEKRNEILKKRVRSLQ 129 >gi|297291464|ref|XP_001093089.2| PREDICTED: ezrin-like isoform 1 [Macaca mulatta] Length = 429 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 11 PEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGN 66 + + KK R L Q + L L+E+ + ++ E + A R + + + + A Sbjct: 194 LQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQ 253 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + + L E + ++ +LE+ +++ + Sbjct: 254 IKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 298 >gi|242373643|ref|ZP_04819217.1| exonuclease SbcC [Staphylococcus epidermidis M23864:W1] gi|242348611|gb|EES40213.1| exonuclease SbcC [Staphylococcus epidermidis M23864:W1] Length = 1009 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 47/161 (29%), Gaps = 15/161 (9%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----------SNSAQI 58 N + + ++ E I L+EK++ + E++ + N S QI Sbjct: 383 NNADTFIKSYNRK--PELIEEIGKLEEKHKHFKTEKENLLNQSNGKTRDYEIIDQYSQQI 440 Query: 59 GQAIAEGNLSLVDALKNETSTLKE-QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + ++ + K+ Q E E + K ++ + Sbjct: 441 VELKKS--IEDIEKYLEKEKQFKKIQRDRQENNEKIKEVNEKYSNIKSLIAKVDATNVDL 498 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 + + + EI +DF+ K Sbjct: 499 NDKQTFIEEIKSALSIGDTCPICGNEIQSLGEHIDFESIAK 539 >gi|309364374|emb|CAP25038.2| hypothetical protein CBG_04303 [Caenorhabditis briggsae AF16] Length = 1091 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 22/210 (10%), Positives = 63/210 (30%), Gaps = 14/210 (6%) Query: 1 MLD--IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML+ + ++ N + L+K+ + + + + +++ + + +K ++I+ + S +I Sbjct: 791 MLNEAKKELKSNENRIK-NLEKK-VSTKEKKLEEFEDQKQKIQEKEKEIQEK----SEEI 844 Query: 59 GQAIAE-----GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 Q + L +E + L + + L++E + + + + + Sbjct: 845 EQLKRKVEESLKIAEDNGKLISEVTKLTDSIAELKEEHSKQTEKFLESQNQQFDQIS-HL 903 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 K + E+ + + + Sbjct: 904 EYELDMARQTTEILNQKILELENQRAENENWEAEKQNLHLEIQENRGKIKEFYDENIRMR 963 Query: 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRD 203 E + Q MI + S Sbjct: 964 TENEVNQRMIQQLLDKLSSARSSGNSYSNP 993 >gi|309356484|emb|CAP37104.2| hypothetical protein CBG_19958 [Caenorhabditis briggsae AF16] Length = 572 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 58/150 (38%), Gaps = 13/150 (8%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR---------NSNSAQ 57 +R+ + + ++ R+ E E L E+NR L + E++ + N + + Sbjct: 210 LREENQSIVDEMQLRNDEI-VEENRKLAEENRELKSRYEELEKLKTENSNLLAENKLNQE 268 Query: 58 IGQAIA---EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 I + A E +L + + E LK++L +++ E ++ S +++ + + Sbjct: 269 ISKKFAELQEEKRTLSEISQQEIFDLKKELELVKAENTKLSSEIEQNAEKSAKNHEKLLE 328 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEI 144 E V + +E F + Sbjct: 329 DRVLLLETRYQLEVDDLKKSFETEKEEFRL 358 >gi|238917187|ref|YP_002930704.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Eubacterium eligens ATCC 27750] gi|238872547|gb|ACR72257.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Eubacterium eligens ATCC 27750] Length = 865 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 26/109 (23%) Query: 11 PEHLDIALKKRHLEPQSEYI-LSLDEKNRIL-IKKIED--IRARRNSNSAQ--------- 57 + +D A ++ + + + LDEK R + +IE+ ++ ++ S + Sbjct: 391 IDLVDEACAM--IKTELDSMPAELDEKRRKIMQLEIEEAALKKETDNLSKERLDALQKEL 448 Query: 58 --------IGQAIAEGNLSLVD---ALKNETSTLKEQLPILEKEEHEVC 95 I +A + S VD LK E + Q+ ++E Sbjct: 449 SELRSDFNIQKAKWDSEKSSVDQVSKLKEEIDQINTQIAQAKREYDLNK 497 >gi|156843033|ref|XP_001644586.1| hypothetical protein Kpol_1003p33 [Vanderwaltozyma polyspora DSM 70294] gi|156115232|gb|EDO16728.1| hypothetical protein Kpol_1003p33 [Vanderwaltozyma polyspora DSM 70294] Length = 572 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 39/82 (47%), Gaps = 8/82 (9%) Query: 5 QWIRQ---NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKK----IEDIRARRNSNSAQ 57 ++I + NP +++AL+ R L P + + +KN + + +E++R + + + Sbjct: 452 KFINEEKRNPVIIELALRSR-LPPDFDRYCAEIKKNIGTLSEFNEKLEELRNQHEEHLKE 510 Query: 58 IGQAIAEGNLSLVDALKNETST 79 I +A + ++K E + Sbjct: 511 IEEAKLNAKNEDLKSVKKEVNK 532 >gi|124486975|ref|NP_001074712.1| filamin-A-interacting protein 1 [Mus musculus] gi|116138559|gb|AAI25582.1| Filamin A interacting protein 1 [Mus musculus] gi|124298056|gb|AAI31966.1| Filamin A interacting protein 1 [Mus musculus] gi|148694476|gb|EDL26423.1| mCG18834, isoform CRA_b [Mus musculus] Length = 1214 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 15/79 (18%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVD 71 S+ I L+E N+ L K E+++ R+ + ++ EG + Sbjct: 339 SQRIEELEETNKSLQKAEEELQELRDKIAKGECGNSSLMAEVESLRKRVLEMEGKDEEIT 398 Query: 72 ALKNETSTLKEQLPILEKE 90 + + LK++L E Sbjct: 399 KTEAQCRELKKKLQEEEHH 417 >gi|327401278|ref|YP_004342117.1| chromosome segregation protein SMC [Archaeoglobus veneficus SNP6] gi|327316786|gb|AEA47402.1| chromosome segregation protein SMC [Archaeoglobus veneficus SNP6] Length = 1170 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS--LVD 71 KR ++ ++ I +DE+ L KIED R R ++ + +E V Sbjct: 835 YRREQIKRAIDEKNAAIQRIDEEVSSLKAKIEDGRNRIEELKRELEKLRSEEERVGREVR 894 Query: 72 ALKNETSTLKEQLPILEKEEHEVCS 96 L+ + L E++ LEKE+ Sbjct: 895 ELRKKRDELLERIKSLEKEKAACEF 919 >gi|256849895|ref|ZP_05555326.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US] gi|256713384|gb|EEU28374.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US] Length = 374 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 26 QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI--AEGNLSLVDALKNETSTLKEQ 83 +E IL LD N+ KI + A+ + +A+ + A+ N +D + + +L+++ Sbjct: 207 DAERILKLDADNKANNSKIAKLDAQIKALTAERDKLKGGADANKKSLDEAQAKADSLEKE 266 Query: 84 LPILEKEE 91 L +K+ Sbjct: 267 LAAEKKKF 274 >gi|242054405|ref|XP_002456348.1| hypothetical protein SORBIDRAFT_03g034390 [Sorghum bicolor] gi|241928323|gb|EES01468.1| hypothetical protein SORBIDRAFT_03g034390 [Sorghum bicolor] Length = 915 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 13/92 (14%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 395 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASK-----------A 443 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ E L+++L L+ + + + Sbjct: 444 RLVEVRKELDNLRDKLQPLQMRYRKEKERIDE 475 >gi|196002189|ref|XP_002110962.1| hypothetical protein TRIADDRAFT_54435 [Trichoplax adhaerens] gi|190586913|gb|EDV26966.1| hypothetical protein TRIADDRAFT_54435 [Trichoplax adhaerens] Length = 328 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN----SAQIGQAIAEGNLSLV 70 D AL K+ L + L N L +++ +R RN + IG+ +E + + Sbjct: 97 DEALNKKDLSF-IDQRNQLVRDNESLNFEVKSLREERNKLIQKMNKDIGELSSERDDIDI 155 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKK 100 L E LK++L + H++ +LK Sbjct: 156 -KLNQEIEDLKQELKKAKNRIHDLTENLKD 184 >gi|154414156|ref|XP_001580106.1| viral A-type inclusion protein [Trichomonas vaginalis G3] gi|121914320|gb|EAY19120.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3] Length = 2870 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 26/224 (11%), Positives = 72/224 (32%), Gaps = 17/224 (7%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M I+ I+ + ++ K + D++ + LIK++E + + + I Sbjct: 565 MNQIKLIKDKQDEVESKNKAK------------DQQMKKLIKELEKEQKKNKDLTLTIAN 612 Query: 61 A-----IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 A I + +D L++E S LK+++ E++ + K L + + + Sbjct: 613 AEDPKHIQTQMQARIDDLQSEISNLKQEIQQNEQKYQNLKKENKSLKNDNESANHTISAL 672 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 + + +K + + + L + Sbjct: 673 QEEIKKISDNTDLTRKIEEQEKEVDQLRKYNEKLETTISSSKQQKEEMLHNQNKALKQMI 732 Query: 176 RALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDM 219 L + + + +++ + + T ++ + A + Sbjct: 733 FKLAKEISPNAVHSTSFNKMADEFNMMSQTFNETMKLKEAATNQ 776 >gi|530207|gb|AAA66338.1| heat shock protein [Glycine max] Length = 911 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 2/81 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 393 IDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKARLVEVRKELDD 452 Query: 69 LVDALKNETSTLKEQLPILEK 89 L D L+ +++ +++ Sbjct: 453 LRDKLQPLMMKYRKEKERVDE 473 >gi|307264840|ref|ZP_07546402.1| SMC domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306920098|gb|EFN50310.1| SMC domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 810 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 2/102 (1%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTL 80 L+P+ + I E+ L K+I+ ++ ++ +IGQ I + ++ L E S + Sbjct: 671 LKPKIQSIFKRKEEITKLKKEIDSLKNQQEILVEEIGQKINDKIHEEEQIELLNKEISDI 730 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + E+ + + L++ + N LE + + Sbjct: 731 SYNITSNEQRMISLEKEIGNLLNQLENYTLEIDELKENVRNY 772 >gi|262046862|ref|ZP_06019822.1| phage protein [Lactobacillus crispatus MV-3A-US] gi|260572844|gb|EEX29404.1| phage protein [Lactobacillus crispatus MV-3A-US] Length = 374 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 26 QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI--AEGNLSLVDALKNETSTLKEQ 83 +E IL LD N+ KI + A+ + +A+ + A+ N +D + + +L+++ Sbjct: 207 DAERILKLDADNKANNSKIAKLDAQIKALTAERDKLKGGADANKKSLDEAQAKADSLEKE 266 Query: 84 LPILEKEE 91 L +K+ Sbjct: 267 LAAEKKKF 274 >gi|73544561|ref|XP_848175.1| hypothetical protein [Leishmania major strain Friedlin] gi|321438528|emb|CBZ12287.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 1591 Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 5/83 (6%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNSNSAQIGQAIAEG 65 + E + +LKKR+ E + + LD + R L +IE + A N + Q A E Sbjct: 1243 EKKEKVIYSLKKRNQELEKHKYV-LDHQIRELKGQIEPKQREIAELNQETKQ-QNANLEE 1300 Query: 66 NLSLVDALKNETSTLKEQLPILE 88 + L+ T LK+ + + Sbjct: 1301 QHTSNLTLRQNTEELKKDIAEQQ 1323 >gi|313888471|ref|ZP_07822138.1| chromosome segregation protein SMC [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845500|gb|EFR32894.1| chromosome segregation protein SMC [Peptoniphilus harei ACS-146-V-Sch2b] Length = 1173 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 55/164 (33%), Gaps = 13/164 (7%) Query: 9 QNPEHLDIALKK-RHLEPQSEYILSLDEKNRI--LIKKIEDIRARRNSNSAQIG------ 59 +N + ++ + E I+ ++ NR L K IE++R + IG Sbjct: 386 ENKNKVKNEIENIKFKSETLEDIIE-EKNNRKSNLDKSIENLRENQTEFEKIIGRDNLEL 444 Query: 60 ---QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + E + + K + L ++ LE E + ++++ + + E Sbjct: 445 KNLKEKLEKDDQDFEKTKEDLLRLDDENKKLESNLIERRNEGNEILARLKILENMESNYE 504 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLS 160 + + + S + DF+RA ++ Sbjct: 505 GYNRTVKSFMNFSSRNNIFKDSLYGPVAEKFYVEKDFERAISVA 548 >gi|146186222|ref|XP_001033205.2| Protein kinase domain containing protein [Tetrahymena thermophila] gi|146143219|gb|EAR85542.2| Protein kinase domain containing protein [Tetrahymena thermophila SB210] Length = 1035 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 48/124 (38%), Gaps = 13/124 (10%) Query: 4 IQWIRQNPEHLDI---ALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ ++++ + L LK ++ + I L EK+ + ++I ++ +N +I Q Sbjct: 514 IKELQKDNQQLKKDVDGLKDQNQNL-LDEIQKLKEKDELQQQEINQLKDENKANQEKIEQ 572 Query: 61 AIA---------EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + N + L +E LK ++ ++ + + + + E Sbjct: 573 QQKTIDELSKDNQKNKEDIAYLMDELKKLKSEIDSIKLQMSLLSGNGIDQYRQQVTIFQE 632 Query: 112 EVPI 115 ++ Sbjct: 633 DIEW 636 >gi|116333948|ref|YP_795475.1| prolyl-tRNA synthetase [Lactobacillus brevis ATCC 367] gi|122269368|sp|Q03QS8|SYP_LACBA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|116099295|gb|ABJ64444.1| Prolyl-tRNA synthetase [Lactobacillus brevis ATCC 367] Length = 569 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 64/187 (34%), Gaps = 10/187 (5%) Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF 215 + A + + + + + E+ P ++ +G+ + Sbjct: 31 YIRQVTAGMYAYLPLAFRVLTNIETIIREEMEKINA-VEMLMPAVLPASLWQESGRYETY 89 Query: 216 ADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRD 271 ++F L PT E + T L I K LPL + P +R E R Sbjct: 90 GPNLFKFKNRHDSDFILAPTHEETFTMLVRDAIKSYKRLPLVMYQIQPKYRDED----RP 145 Query: 272 TRGMLRQHQF-WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFS 330 G+LR +F K +ED + +M E I R+ L+YR + G +G Sbjct: 146 RYGLLRGREFIMKDAYSFSLSDEDLDRIYNQMEQAYENIFDRIGLNYRAIVGDGGAMGGK 205 Query: 331 ACKTYDL 337 K + Sbjct: 206 DSKEFSA 212 >gi|227877453|ref|ZP_03995521.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01] gi|293380007|ref|ZP_06626106.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|227862957|gb|EEJ70408.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01] gi|290923414|gb|EFE00318.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] Length = 403 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 8/67 (11%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Query: 26 QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD--ALKNETSTLKEQ 83 ++ ++ D N K+I+++ A+ + + + + D + + +L+++ Sbjct: 223 DADKLIKFDSDNSANQKRIDELNAQIKKLTDERDSLKSGNKQAENDRSEAQAKADSLEKE 282 Query: 84 LPILEKE 90 L + Sbjct: 283 LQGYRDK 289 >gi|237829819|ref|XP_002364207.1| chromosome segregation protein, putative [Toxoplasma gondii ME49] gi|211961871|gb|EEA97066.1| chromosome segregation protein, putative [Toxoplasma gondii ME49] gi|221507071|gb|EEE32675.1| structural maintenance of chromosomes 6, SMC6, putative [Toxoplasma gondii VEG] Length = 1967 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAIAEGNLSLVDALKNET 77 +R L+ + I +L+++ + L K+ ++A+R ++ A A K Sbjct: 1664 RRRLDENAGEIEALEKRQKSLEKERRSLQAQREEGEKRLAAHAAERAEKEKEAIAAKKHA 1723 Query: 78 STLKEQLPILEKEEH 92 L+ +L +E Sbjct: 1724 EGLELRLEEFVREHF 1738 >gi|194382306|dbj|BAG58908.1| unnamed protein product [Homo sapiens] Length = 133 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 LDI+ PE AL+ R E I+S ++ R L ++I + + + + + Sbjct: 58 LDIERFCACPEEAAHALELRKGELRSADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAV 117 Query: 59 GQAIAEGNLSLVDALK 74 +A + V + Sbjct: 118 RALLANQDSGEVQQVL 133 >gi|14249342|ref|NP_116116.1| alpha-internexin [Homo sapiens] gi|20141266|sp|Q16352|AINX_HUMAN RecName: Full=Alpha-internexin; Short=Alpha-Inx; AltName: Full=66 kDa neurofilament protein; Short=NF-66; Short=Neurofilament-66; AltName: Full=Neurofilament 5 gi|13623507|gb|AAH06359.1| Internexin neuronal intermediate filament protein, alpha [Homo sapiens] gi|55961122|emb|CAI16744.1| internexin neuronal intermediate filament protein, alpha [Homo sapiens] gi|119570038|gb|EAW49653.1| internexin neuronal intermediate filament protein, alpha, isoform CRA_a [Homo sapiens] gi|123984627|gb|ABM83659.1| internexin neuronal intermediate filament protein, alpha [synthetic construct] gi|123998609|gb|ABM86906.1| internexin neuronal intermediate filament protein, alpha [synthetic construct] Length = 499 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETSTLKEQL 84 L L+ +S + L Sbjct: 146 ELRDLRAQLEEASSARSQAL 165 >gi|332365115|gb|EGJ42878.1| proline--tRNA ligase [Streptococcus sanguinis SK1059] Length = 616 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + D+ W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDVNRWV 224 >gi|332359971|gb|EGJ37785.1| proline--tRNA ligase [Streptococcus sanguinis SK1056] Length = 616 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + D+ W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDVNRWV 224 >gi|332359309|gb|EGJ37130.1| proline--tRNA ligase [Streptococcus sanguinis SK49] Length = 616 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + D+ W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDVNRWV 224 >gi|327441312|dbj|BAK17677.1| membrane protein [Solibacillus silvestris StLB046] Length = 434 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 40/88 (45%), Gaps = 3/88 (3%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QA 61 ++ R E ++ + LE ++ I + + + +I ++E + A+ N + I + Sbjct: 35 LKKERSQLEAEKKSI-NKSLEQKTNEIQTNQNRQQKIISQLEQLGAKINETNHSIAVVEL 93 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEK 89 E + L++E + LKE++ + Sbjct: 94 DIEIANEEISILEDEIAELKEKIEQRNE 121 >gi|325695492|gb|EGD37392.1| proline--tRNA ligase [Streptococcus sanguinis SK150] Length = 616 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + D+ W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDVNRWV 224 >gi|302392423|ref|YP_003828243.1| chromosome segregation protein SMC [Acetohalobium arabaticum DSM 5501] gi|302204500|gb|ADL13178.1| chromosome segregation protein SMC [Acetohalobium arabaticum DSM 5501] Length = 1188 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 49/134 (36%), Gaps = 8/134 (5%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 N + L+KR + ++ + E L ++ +++ A+ + EG + Sbjct: 854 NKKSEIEELRKRKEKL-ADQKIDFREDQNELKQQKKELEAKLADL-----KEKKEGLTAE 907 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 + +K ++ ++++L E + +K+ + +EE + + E Sbjct: 908 IKEIKEKSQGIRKELE--EIQTEHNEYEVKEAQLEMELESIEEKLVDSYEVEIEAEIDDR 965 Query: 130 KKPSAIHLSREHFE 143 + + E E Sbjct: 966 EPIEDYEVVEERIE 979 >gi|196013033|ref|XP_002116378.1| hypothetical protein TRIADDRAFT_60424 [Trichoplax adhaerens] gi|190580969|gb|EDV21048.1| hypothetical protein TRIADDRAFT_60424 [Trichoplax adhaerens] Length = 4020 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 33/91 (36%), Gaps = 16/91 (17%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG----------------QAI 62 KR E E ++S ++ + ++E+++ + S ++ + I Sbjct: 2580 AKRRYEIGLEQLVSAADQVSAMQLELENLQPQLKQASKEVDDIMVVIEAESIEVSKTEKI 2639 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 +G+ ++ + +K++ E Sbjct: 2640 VKGDEAIANEQAKAAKAIKDECDADLAEAMP 2670 >gi|182683244|ref|YP_001834991.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|303259373|ref|ZP_07345350.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|303261128|ref|ZP_07347077.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303263456|ref|ZP_07349379.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|303265748|ref|ZP_07351646.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303267821|ref|ZP_07353623.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|226701345|sp|B2ISI9|SYP_STRPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|182628578|gb|ACB89526.1| prolyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|302637965|gb|EFL68451.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302639307|gb|EFL69765.1| prolyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|302642517|gb|EFL72862.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302644656|gb|EFL74905.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|302647229|gb|EFL77453.1| prolyl-tRNA synthetase [Streptococcus pneumoniae BS397] Length = 617 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 9/147 (6%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ E +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS + ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY 335 I R L ++ + G +G + + Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEF 210 >gi|123432940|ref|XP_001308514.1| hypothetical protein [Trichomonas vaginalis G3] gi|121890198|gb|EAX95584.1| hypothetical protein TVAG_370880 [Trichomonas vaginalis G3] Length = 394 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 41/134 (30%), Gaps = 14/134 (10%) Query: 2 LDIQWIRQ---NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 + I IR + + +K R LE + L + KIE ++A N + Sbjct: 73 ISINNIRDAISTLKSVQKYMKMRILEGIIGVLEQLQKDQSSTTNKIEKLQADLNQIQKEK 132 Query: 59 -----------GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 Q A+ L ++ S LK + + S K + Sbjct: 133 ENIEKEMQTLHSQPKAKEGNDLPKEFLSKISELKNSKNFYQIYKFFEEISEKGNQKMMQK 192 Query: 108 VPLEEVPIGTSANE 121 EE+ + + Sbjct: 193 ACDEELWKKQNDFD 206 >gi|97050032|sp|Q9CS72|FLIP1_MOUSE RecName: Full=Filamin-A-interacting protein 1; Short=FILIP Length = 1211 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 15/79 (18%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVD 71 S+ I L+E N+ L K E+++ R+ + ++ EG + Sbjct: 339 SQRIEELEETNKSLQKAEEELQELRDKIAKGECGNSSLMAEVESLRKRVLEMEGKDEEIT 398 Query: 72 ALKNETSTLKEQLPILEKE 90 + + LK++L E Sbjct: 399 KTEAQCRELKKKLQEEEHH 417 >gi|257462679|ref|ZP_05627088.1| prolyl-tRNA synthetase [Fusobacterium sp. D12] Length = 593 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 7/77 (9%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSV 407 E G+ S+ + + Y D +S L G G+ VGR + A +E + +G + Sbjct: 432 ECGHIFKLGDKYSKALGASYLDEKGESKI---MLMGCYGIGVGRTMAAAIEQNYDENG-I 487 Query: 408 TIPTVLRPYMNNLAVIK 424 PT L PY+ + VI Sbjct: 488 IWPTALAPYL--VDVIP 502 >gi|149019059|gb|EDL77700.1| rCG25966, isoform CRA_b [Rattus norvegicus] Length = 965 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 15/79 (18%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVD 71 S+ I L+E N+ L K E+++ R + ++ EG + Sbjct: 91 SQRIEELEETNKSLQKAEEELQELREKIAKGECGNSSLMAEVESLRKRVLEMEGKDEEIT 150 Query: 72 ALKNETSTLKEQLPILEKE 90 + + LK++L E Sbjct: 151 KTEAQCRELKKKLQEEEHH 169 >gi|126309734|ref|XP_001376594.1| PREDICTED: similar to butyrophilin-like 2 (MHC class II associated), [Monodelphis domestica] Length = 860 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 31/328 (9%), Positives = 83/328 (25%), Gaps = 35/328 (10%) Query: 5 QWIRQNPEHLDIAL-KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 + IR++ + +L R SL ++ + L K+ + + A R S + + I Sbjct: 549 RVIRESLDTEMESLYANRK---------SLTKERKSLAKERQSLDAERESLAKERQSLIK 599 Query: 64 EGN---------LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 E + +L E +L ++ ++ V + + Sbjct: 600 ERESLIKERESLDTERRSLIKEAESLAKKRQCFTSKDEVVEDLDWRKAHLYAVNVTMDPD 659 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 + ++ + ++L + K++ R Sbjct: 660 TAHPELILSDQGRCVIRGECPQNICDNTKRFDSLPCV--LGLEKITSGRHYWELKVGNRA 717 Query: 175 ERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEV 234 + DL + L + +G + + D+ + T + + Sbjct: 718 DW-------DLGVCRDDVRKKGVVTLSPENGFWG---LRLYNDEYWALTSPPTFLSLRQS 767 Query: 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 + T ++ + GS +R + + Sbjct: 768 PHKIGIFLDYDAGDVSFYNMTDVSHIYNFTPGSFHGALCPFIRLWSCDR----PCDQRNL 823 Query: 295 SFTEHERMLSCAEEILKRLDLHYRVVSL 322 S + + + + Sbjct: 824 SCVQRGHPCAQCGSPCAQRNCSCVQCGC 851 >gi|298249049|ref|ZP_06972853.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963] gi|297547053|gb|EFH80920.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963] Length = 872 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 11 PEHLDIALKKRHLEPQSE--YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A ++ +E S I +LD + R L + E ++ + S + Sbjct: 391 IDLVDEAASRKRVELDSTPTEIDALDRRIRQLQIEHEALKKESDPGSQE----RRTKVEQ 446 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + L+ + + +K L + ++ Sbjct: 447 EIANLQEQLNAMKLALERERGPVETMRRVQQE 478 >gi|262283493|ref|ZP_06061259.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] gi|262260984|gb|EEY79684.1| prolyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] Length = 616 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + DD+F L PT E + T L + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGDDLFKLKNREGSDFILGPTHEETFTALVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVTYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R ++ ++ + G +G + + DL+ WL Sbjct: 184 IFTRSEIDFKAIIGDGGAMGGKDSQEFMAITPDRTDLDRWL 224 >gi|157150969|ref|YP_001451117.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|189083519|sp|A8AZA7|SYP_STRGC RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|157075763|gb|ABV10446.1| prolyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 616 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + DD+F L PT E + T L + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGDDLFKLKNREGSDFILGPTHEETFTALVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVTYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R ++ ++ + G +G + + DL+ WL Sbjct: 184 IFTRSEIDFKAIIGDGGAMGGKDSQEFMAITPDRTDLDRWL 224 >gi|156061729|ref|XP_001596787.1| hypothetical protein SS1G_03010 [Sclerotinia sclerotiorum 1980] gi|154700411|gb|EDO00150.1| hypothetical protein SS1G_03010 [Sclerotinia sclerotiorum 1980 UF-70] Length = 518 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 6/98 (6%) Query: 9 QNPEHLDIALKKRHL----EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + E ALK + +L EK L +++ ++A ++ G AE Sbjct: 174 DDTEKSIEALKAKRKTLQDSLDDPESKALSEKYSKLQGELDVLKAEQDDAFKNFGALKAE 233 Query: 65 GN--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + + N +K++ + + + ++ Sbjct: 234 KDRLQAEQQEKWNALKQIKDEHYQAVRAANSYDFNQRQ 271 >gi|50303071|ref|XP_451473.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640604|emb|CAH03061.1| KLLA0A10857p [Kluyveromyces lactis] Length = 752 Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 62/233 (26%), Gaps = 27/233 (11%) Query: 18 LKKRHLEPQ-SEYILSLDEKNRILI----------KKIEDIRARRNSNSAQIGQAIAEGN 66 + R E + + +L D + L+ ++IE++R N S ++ + Sbjct: 263 QEIRGDETKALQSVLDADVWRKQLLSEESKINERLQEIENLRKEFNEESLEVKKL----- 317 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 + L+ + E+L +E ++ E ++ ++ S R Sbjct: 318 DNERTDLEEHLEQISEKLIDMESDKAEARAASILYGLGFSTEAQQQPTNSFSGG----WR 373 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDF-------DRATKLSGARFSVLTGHLAHLERALG 179 A+ + + E ++D + V E A Sbjct: 374 MRLSLARALFCQPDLLLLDEPSNMLDVPSIAYLAEYLKTYPATVLVVSHDRAFLNEVATD 433 Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 ++ + E T Q + ++ Sbjct: 434 IIYQHNERLDYYRGQDFDTFYATKEERRKTAQREYENQMAYRKHLQEFIDKYR 486 >gi|325187907|emb|CCA22451.1| flagellar associated protein putative [Albugo laibachii Nc14] Length = 908 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 45/138 (32%), Gaps = 10/138 (7%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSA-------QIGQAIAE--GNLSLVDALKNETS 78 + +L ++ K + + E +R+ RN S +I + + ++ LK E + Sbjct: 490 KKVLEMECKLKQQQQLYEQVRSERNHCSKNLNDSRDEISELKRKFTILNHQIEQLKEEVA 549 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 T K+ + + E +H K L V + + + Sbjct: 550 T-KDDVLVKEHFQHCKVEKEKDLFKNELGRLHALVASNETTIHHQDAELKKMSAVMRGMD 608 Query: 139 REHFEIGEALGLMDFDRA 156 E + + + +R Sbjct: 609 DEALKQRKEYDQIIHERD 626 >gi|322390835|ref|ZP_08064345.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903] gi|321142505|gb|EFX37973.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 903] Length = 616 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREGSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R + Y+ + G +G + + DL+ W+ Sbjct: 184 IFTRSGIDYKAIIGDGGAMGGKDSQEFMAVTPARTDLDRWV 224 >gi|290985784|ref|XP_002675605.1| predicted protein [Naegleria gruberi] gi|284089202|gb|EFC42861.1| predicted protein [Naegleria gruberi] Length = 377 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 36/97 (37%), Gaps = 2/97 (2%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 ++ D + K ++ L++ N L ++++I+ + + QI + EG Sbjct: 100 DNCDEKIAKAQSRLDVQHKKDLNKNNEPL--ELQNIKKEIDKVTKQIEELTTEGEYEEAH 157 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 L +LK++ +E + + + Sbjct: 158 KLMERLDSLKKEKETVEAKAPTQKIGDTQELIVCEIC 194 >gi|255652367|ref|ZP_05399269.1| hypothetical protein CdifQCD_19461 [Clostridium difficile QCD-37x79] Length = 1716 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 10/107 (9%) Query: 5 QWIRQNPEHLDIALKKRHLEPQS----EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I++ + +D +++ + E I LD R L + R +I + Sbjct: 812 NAIQEQIDAIDKQIEEEQKAEEEKAYNEKISDLD---RKLATAKN--QKEREKIQKEISE 866 Query: 61 AIAEGNLSLVDALK-NETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 A ++ L+D + E + LKEQ+ ++ E K+ Sbjct: 867 AQSDRQKKLLDEQRQQEKNRLKEQIENIKTEASNKKEQYKEEYDNQK 913 >gi|255103108|ref|ZP_05332085.1| hypothetical protein CdifQCD-6_20018 [Clostridium difficile QCD-63q42] Length = 1716 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 10/107 (9%) Query: 5 QWIRQNPEHLDIALKKRHLEPQS----EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I++ + +D +++ + E I LD R L + R +I + Sbjct: 812 NAIQEQIDAIDKQIEEEQKAEEEKAYNEKISDLD---RKLATAKN--QKEREKIQKEISE 866 Query: 61 AIAEGNLSLVDALK-NETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 A ++ L+D + E + LKEQ+ ++ E K+ Sbjct: 867 AQSDRQKKLLDEQRQQEKNRLKEQIENIKTEASNKKEQYKEEYDNQK 913 >gi|188995072|ref|YP_001929324.1| ClpB protein [Porphyromonas gingivalis ATCC 33277] gi|188594752|dbj|BAG33727.1| ClpB protein [Porphyromonas gingivalis ATCC 33277] Length = 863 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 10/107 (9%) Query: 7 IRQNPEHLDIALKKRHLE--PQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA-- 61 I+ + + L R++ + + L DE L +++ + + S +I Q Sbjct: 363 IKDDAIIAAVKLSHRYITERFLPDKAIDLMDEAAARLRMEVDSLPEELDEISRRIKQLEI 422 Query: 62 -----IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 E + V L E + LKE+ + + + ++ Sbjct: 423 EREAIKRENDEEKVQFLDREIAELKEKEASEKAQWQNEKDRINQIQQ 469 >gi|119573310|gb|EAW52925.1| nestin, isoform CRA_c [Homo sapiens] gi|119573311|gb|EAW52926.1| nestin, isoform CRA_c [Homo sapiens] Length = 1621 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 24/94 (25%) Query: 12 EHLDIALKK-----------------RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN 54 E + +LK R LE E + SL+++N+ L+K +E +R Sbjct: 551 EEIQESLKTLENQSHETLERENQECPRSLEEDLETLKSLEKENKELLKDVEVVR----PL 606 Query: 55 SAQ-IGQAIAEGNLS--LVDALKNETSTLKEQLP 85 + +GQ G + +L+ E L + L Sbjct: 607 EKEAVGQLKPTGKEDTQTLQSLQKENQELMKSLE 640 >gi|38176300|ref|NP_006608.1| nestin [Homo sapiens] gi|146345464|sp|P48681|NEST_HUMAN RecName: Full=Nestin gi|55960770|emb|CAI16338.1| nestin [Homo sapiens] gi|260158898|gb|ACX32329.1| nestin [synthetic construct] Length = 1621 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 24/94 (25%) Query: 12 EHLDIALKK-----------------RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN 54 E + +LK R LE E + SL+++N+ L+K +E +R Sbjct: 551 EEIQESLKTLENQSHETLERENQECPRSLEEDLETLKSLEKENKELLKDVEVVR----PL 606 Query: 55 SAQ-IGQAIAEGNLS--LVDALKNETSTLKEQLP 85 + +GQ G + +L+ E L + L Sbjct: 607 EKEAVGQLKPTGKEDTQTLQSLQKENQELMKSLE 640 >gi|34540850|ref|NP_905329.1| clpB protein [Porphyromonas gingivalis W83] gi|54035793|sp|Q7MVE7|CLPB_PORGI RecName: Full=Chaperone protein ClpB gi|34397164|gb|AAQ66228.1| clpB protein [Porphyromonas gingivalis W83] Length = 863 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 10/107 (9%) Query: 7 IRQNPEHLDIALKKRHLE--PQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA-- 61 I+ + + L R++ + + L DE L +++ + + S +I Q Sbjct: 363 IKDDAIIAAVKLSHRYITERFLPDKAIDLMDEAAARLRMEVDSLPEELDEISRRIKQLEI 422 Query: 62 -----IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 E + V L E + LKE+ + + + ++ Sbjct: 423 EREAIKRENDEEKVQFLDREIAELKEKEASEKAQWQNEKDRINQIQQ 469 >gi|307717987|ref|YP_003873519.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] gi|306531712|gb|ADN01246.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6192] Length = 577 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSV 407 EI G+F S+RM + D + + + GS G+ +GR + I+E + G V Sbjct: 416 EIGHIFKLGDFYSQRMGLSFVDERGREIH-PYM--GSYGIGMGRLISMIVETNSDEHGIV 472 Query: 408 TIPTVLRPYM 417 P V P+M Sbjct: 473 WPPQV-APFM 481 >gi|306825925|ref|ZP_07459263.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431857|gb|EFM34835.1| proline--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 617 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S +S ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYNSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|291240581|ref|XP_002740197.1| PREDICTED: Tax1 (human T-cell leukemia virus type I) binding protein 1-like [Saccoglossus kowalevskii] Length = 668 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 7/129 (5%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 +L LDEK + +K+ D N +I +A + ++++ E E Sbjct: 546 KVLELDEKYQDSVKRYADAEKELNELKKKIKEAKRQN---EAQEVRHKDDVATEFHDAQE 602 Query: 89 KEEHEVCSSLKKLISCI-PNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA 147 + P+ P + ++ + K+ ++ F E Sbjct: 603 FPADRAARWCPECNLLFPPSCPSDTFEQHVQSHFGRVCPMCRKQFPKDSCDQDAF---EN 659 Query: 148 LGLMDFDRA 156 F+R Sbjct: 660 HVQTHFERE 668 >gi|187956888|gb|AAI58018.1| Cdc42bpa protein [Mus musculus] Length = 1732 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 43/116 (37%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L + +R L+ I + +++ + L ++ E+ Sbjct: 487 LEIKSLKEEIEKLRKQVAEVNHLEQQLEEANSVRRELDDAFRQIKASEKQIKTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|119570039|gb|EAW49654.1| internexin neuronal intermediate filament protein, alpha, isoform CRA_b [Homo sapiens] Length = 494 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETSTLKEQL 84 L L+ +S + L Sbjct: 146 ELRDLRAQLEEASSARSQAL 165 >gi|254692972|ref|NP_001028457.1| serine/threonine-protein kinase MRCK alpha [Mus musculus] Length = 1732 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 43/116 (37%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L + +R L+ I + +++ + L ++ E+ Sbjct: 487 LEIKSLKEEIEKLRKQVAEVNHLEQQLEEANSVRRELDDAFRQIKASEKQIKTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|134034172|sp|Q3UU96|MRCKA_MOUSE RecName: Full=Serine/threonine-protein kinase MRCK alpha; AltName: Full=CDC42-binding protein kinase alpha gi|187957250|gb|AAI58096.1| Cdc42bpa protein [Mus musculus] Length = 1719 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 43/116 (37%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L + +R L+ I + +++ + L ++ E+ Sbjct: 487 LEIKSLKEEIEKLRKQVAEVNHLEQQLEEANSVRRELDDAFRQIKASEKQIKTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|21392397|dbj|BAC00852.1| filamin-interacting protein S-FILIP [Rattus norvegicus] Length = 965 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 15/79 (18%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVD 71 S+ I L+E N+ L K E+++ R + ++ EG + Sbjct: 91 SQRIEELEETNKSLQKAEEELQELREKIAKGECGNSSLMAEVESLRKRVLEMEGKDEEIT 150 Query: 72 ALKNETSTLKEQLPILEKE 90 + + LK++L E Sbjct: 151 KTEAQCRELKKKLQEEEHH 169 >gi|332289523|ref|YP_004420375.1| hypothetical protein UMN179_01461 [Gallibacterium anatis UMN179] gi|330432419|gb|AEC17478.1| conserved hypothetical protein [Gallibacterium anatis UMN179] Length = 353 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 63/214 (29%), Gaps = 25/214 (11%) Query: 5 QWIR--QNPEHLDIALKKRHLEPQSEYILS--------LDEKNRILIKKIEDIRARRNSN 54 + IR + +I +R + + E + LD + R L ++ E ++ + Sbjct: 118 KEIRACERINTYEINKIERKEKDEIEKLRKQLEQQKQNLDIERRELEQQKEKVKEEQ--- 174 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 I +A E D ++ + +LK++L + ++ + + Sbjct: 175 -YLIDKANKELENQN-DQMQKKYESLKKELSSYLVDTSKLKFYED-----LAVFIDKNGL 227 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHL 174 G + +I + D+ K A V G ++ Sbjct: 228 YGFVNRDGEVIIEPKFLYAGRFSQERSAVKDRNQLWGFIDKTGKYVIAPQYVCVGAFSNE 287 Query: 175 ERALGQF-----MIDLHTSEHGYTEVSAPLLVRD 203 A + GY ++ ++ Sbjct: 288 GLAGVYNGGYLLNGGCAGGKWGYMDIYGNWVINP 321 >gi|315185841|gb|EFU19606.1| prolyl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 589 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSV 407 EI G+F S+RM + D + + + GS G+ +GR + I+E + G V Sbjct: 428 EIGHIFKLGDFYSQRMGLSFFDERGREIH-PYM--GSYGIGMGRLISMIVETNSDEHGIV 484 Query: 408 TIPTVLRPYM 417 P V P+M Sbjct: 485 WPPQV-APFM 493 >gi|301614287|ref|XP_002936623.1| PREDICTED: cytoplasmic dynein 1 heavy chain 1 isoform 2 [Xenopus (Silurana) tropicalis] Length = 4644 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 23/189 (12%), Positives = 67/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 3204 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 3258 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL + + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 3259 QEQLHKQQAIIADKQMSVKEDLDQVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 3318 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 3319 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYLSNPSFNY 3377 Query: 199 LLVRDEAMY 207 LV ++ Sbjct: 3378 ELVNRASLA 3386 >gi|194041957|ref|XP_001929355.1| PREDICTED: alpha-internexin-like [Sus scrofa] Length = 499 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 146 ELRELRAQLEEASSA 160 >gi|58037405|ref|NP_083508.1| transmembrane and coiled-coil domain-containing protein 5B [Mus musculus] gi|81895304|sp|Q80X59|TMC5B_MOUSE RecName: Full=Transmembrane and coiled-coil domain-containing protein 5B gi|29747975|gb|AAH50803.1| RIKEN cDNA 4930563P21 gene [Mus musculus] gi|123239847|emb|CAM19806.1| novel protein [Mus musculus] Length = 307 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 29/240 (12%), Positives = 64/240 (26%), Gaps = 16/240 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R + + + + + E L++KN+ L K + +++ S + + Sbjct: 77 RDDFNEILAQKETALKDLELES-AKLEKKNKTLSKNVMELQ---KKISKGL-----KNIA 127 Query: 68 SLVDALKNETSTLKEQLP-------ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 S + LK + + K +L EKE ++ S + + + Sbjct: 128 SDPETLKKKVTEFKVKLQKSTESCAQQEKEIAKMESDYQSVFQLCEDQAHYIKKYQEILR 187 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 E + V I ++ G + L Sbjct: 188 EMEKEKEVMLLEKEISKAQNDSSQVVKPGSTLVETIQSNMEKNIIKKQKRKFWLRHFRYL 247 Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLY 240 F + + V + + T + + D + T EV + Sbjct: 248 FFMVMIVIRLLGYVFFHLQYVNPDFLVDTLPMLMSRSSLKWLRDILFPFLTLEVEDVLPH 307 >gi|148680676|gb|EDL12623.1| rabaptin, RAB GTPase binding effector protein 1, isoform CRA_d [Mus musculus] Length = 431 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 211 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 268 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 269 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 328 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 329 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 368 >gi|307106393|gb|EFN54639.1| hypothetical protein CHLNCDRAFT_52951 [Chlorella variabilis] Length = 1256 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 13/108 (12%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILI----------KKIEDIRARRNSNSA 56 +R E+ + +K Q++ L+ + R L K+ E +A Sbjct: 830 VRNQLEYEEANGRKAGEALQAKE-AELEAERRALAARQQEEQKFAKEGEAAQAEIAELQR 888 Query: 57 QIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 ++G+ EG + + LK + K+ + + S+L+ L Sbjct: 889 EMGEKRKELEGLEAELKELKERVAANKDAVAKHRRSIAGQQSALEDLW 936 >gi|126306936|ref|XP_001368382.1| PREDICTED: similar to pan-epithelial glycoprotein isoform 1 [Monodelphis domestica] Length = 1718 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 40/104 (38%), Gaps = 12/104 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 L+I+ +++ E K R S+++ E+ + ++++D + ++ QI Sbjct: 487 LEIKNLKEEIE------KLRKQVTDSDHLEQQLEEASSMRRELDDASRQIKASEKQIKLL 540 Query: 62 IAEGNL------SLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 E + LK++T LK+ + E + Sbjct: 541 KQEREDLNKELVESSERLKSQTKELKDAHSQRKLAMQEFSEMNE 584 >gi|329663133|ref|NP_001193238.1| angiomotin [Bos taurus] gi|297492904|ref|XP_002699980.1| PREDICTED: angiomotin [Bos taurus] gi|296470902|gb|DAA13017.1| angiomotin [Bos taurus] Length = 1079 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 6/114 (5%) Query: 1 MLDIQ-WIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 497 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 556 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 557 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 610 >gi|74186081|dbj|BAE34156.1| unnamed protein product [Mus musculus] Length = 577 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 43/140 (30%), Gaps = 7/140 (5%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQA 61 ++ I + + L E Q+ L L+++ + + E + R + + Sbjct: 351 LKQIEEQTKKAQQEL-----EEQARRALELEQERKRAQSEAEKLAKERQEAEEAKEALLQ 405 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + + L +E + L ++ LE + S + V + Sbjct: 406 ASRDQKKTQEQLASEMAELTARISQLEMARKKKESEAVEWQQKAQMVQEDLEKTRAELKT 465 Query: 122 NILIRSVGKKPSAIHLSREH 141 + V + H ++ Sbjct: 466 AMSTPHVAEPAENEHDEQDE 485 >gi|45384404|ref|NP_990273.1| CAP-Gly domain-containing linker protein 1 [Gallus gallus] gi|3024541|sp|O42184|CLIP1_CHICK RecName: Full=CAP-Gly domain-containing linker protein 1; AltName: Full=Cytoplasmic linker protein 170; Short=CLIP-170; AltName: Full=Restin gi|2338714|gb|AAC60344.1| restin [Gallus gallus] Length = 1433 Score = 38.2 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 29/82 (35%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 +L +E + KK +++ + Q QA A+ V + + K+ + + Sbjct: 1034 NLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEK 1093 Query: 89 KEEHEVCSSLKKLISCIPNVPL 110 E + ++ + N Sbjct: 1094 IETLASLENSRQTNEKLQNELD 1115 >gi|328944571|gb|EGG38732.1| proline--tRNA ligase [Streptococcus sanguinis SK1087] Length = 616 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWV 224 >gi|327488783|gb|EGF20582.1| proline--tRNA ligase [Streptococcus sanguinis SK1058] Length = 616 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWV 224 >gi|327468388|gb|EGF13873.1| proline--tRNA ligase [Streptococcus sanguinis SK330] Length = 616 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDAAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWV 224 >gi|327462766|gb|EGF09088.1| proline--tRNA ligase [Streptococcus sanguinis SK1057] Length = 616 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPARTDLNRWV 224 >gi|325686585|gb|EGD28611.1| proline--tRNA ligase [Streptococcus sanguinis SK72] gi|325697433|gb|EGD39319.1| proline--tRNA ligase [Streptococcus sanguinis SK160] Length = 616 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWV 224 >gi|324992477|gb|EGC24398.1| proline--tRNA ligase [Streptococcus sanguinis SK405] gi|324995993|gb|EGC27904.1| proline--tRNA ligase [Streptococcus sanguinis SK678] gi|327460709|gb|EGF07044.1| proline--tRNA ligase [Streptococcus sanguinis SK1] gi|327472430|gb|EGF17861.1| proline--tRNA ligase [Streptococcus sanguinis SK408] Length = 616 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWV 224 >gi|324989750|gb|EGC21693.1| proline--tRNA ligase [Streptococcus sanguinis SK353] Length = 616 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWV 224 >gi|323350534|ref|ZP_08086196.1| proline--tRNA ligase [Streptococcus sanguinis VMC66] gi|322123216|gb|EFX94901.1| proline--tRNA ligase [Streptococcus sanguinis VMC66] Length = 616 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWV 224 >gi|260438844|ref|ZP_05792660.1| glycine--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292808683|gb|EFF67888.1| glycine--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 462 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 175 TAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + LK L + R +L F + T D+E + Sbjct: 231 KPGTDLEWFRYWRGFCINWLKTLGIKDEEMRARDHSPEELCFYSKGTTDIEFLFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 289 GELWGIADRTDY 300 >gi|213962182|ref|ZP_03390446.1| DNA mismatch repair protein MutS domain protein [Capnocytophaga sputigena Capno] gi|213955188|gb|EEB66506.1| DNA mismatch repair protein MutS domain protein [Capnocytophaga sputigena Capno] Length = 723 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 8/113 (7%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILS---LDEKNRILIKKIEDI----RARRNSNSAQ 57 + I E D + + L + + I D K R L+ + + A+R S + Sbjct: 568 KLI-NYQELYDQSQRMISLGSKVDQIAERYFYDGKRRPLVSEFLKLIEMENAKRKQMSKE 626 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 E + + + +++Q +KE + K+ + +V Sbjct: 627 ERTKQKEEKKTTTQEVHKQMEAIRQQRKEEKKERIAQERAEKEKLQRALSVGD 679 >gi|157693038|ref|YP_001487500.1| hypothetical protein BPUM_2271 [Bacillus pumilus SAFR-032] gi|166987421|sp|A8FFC3|Y2271_BACP2 RecName: Full=UPF0365 protein BPUM_2271 gi|157681796|gb|ABV62940.1| hypothetical protein BPUM_2271 [Bacillus pumilus SAFR-032] Length = 330 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 16/97 (16%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDE------KNRILIKKIEDIRARRNSNSAQ 57 + + +NP+ + + + L+ + ILS+D KN I + + A +N Sbjct: 191 KRVLENPDMISQTVLGKGLDSGTAFEILSIDIADVDIGKNIGAILQTDQAEADKN----- 245 Query: 58 IGQAIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 I QA AE ++ ++ + ++ ++ E E Sbjct: 246 IAQAKAEERRAMAVAQEQEMRAKVEEMRAKVVEAEAE 282 >gi|112253526|gb|ABI14350.1| unknown [Pfiesteria piscicida] Length = 659 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 19/204 (9%), Positives = 50/204 (24%), Gaps = 9/204 (4%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDAL 73 LKK + + ++E +A A++ +A + + V+ Sbjct: 54 EDLKKARETGDEAKVKEAKAEVEKAKAEVEKAKAEIKEAEAKVEKAEVKVKEAEAKVEKA 113 Query: 74 KNETSTLKEQLPILEK-EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 K E + ++ E + + + P + ++ G Sbjct: 114 KAEIKEAEAKVEKAEVLKCVVTGQLKPVDQCMLSDKLWGTHPAHFVNIKVVVDMCTGYVT 173 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSV------LTGHLAHLERALGQFMIDLH 186 + ++ R K + + + Sbjct: 174 KGMAHEDSGTTRVSPTCMVRCARGGKTTALLHLFLQLKSQNMNPIFITFNGFSKVSKHGS 233 Query: 187 TSEHGYTEVSAPLLVRDEAMYGTG 210 + + L+ D+ + GT Sbjct: 234 LLDRMCRSIIHSLMKDDDPLKGTD 257 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 40/122 (32%), Gaps = 4/122 (3%) Query: 10 NPEHLDIALKKRHLEPQSEYILSL--DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 N E + +K + + K + ++E +A A+I +A A+ Sbjct: 41 NEESVAARIK--FAMEDLKKARETGDEAKVKEAKAEVEKAKAEVEKAKAEIKEAEAKVEK 98 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 + V + E K + I E E + + K + P+++ + Sbjct: 99 AEVKVKEAEAKVEKAKAEIKEAEAKVEKAEVLKCVVTGQLKPVDQCMLSDKLWGTHPAHF 158 Query: 128 VG 129 V Sbjct: 159 VN 160 Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 28/77 (36%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M D++ R+ + + K +E + + + K+E + A++ + Sbjct: 53 MEDLKKARETGDEAKVKEAKAEVEKAKAEVEKAKAEIKEAEAKVEKAEVKVKEAEAKVEK 112 Query: 61 AIAEGNLSLVDALKNET 77 A AE + K E Sbjct: 113 AKAEIKEAEAKVEKAEV 129 >gi|125718857|ref|YP_001035990.1| prolyl-tRNA synthetase [Streptococcus sanguinis SK36] gi|152112958|sp|A3CQI5|SYP_STRSV RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gi|125498774|gb|ABN45440.1| Prolyl-tRNA synthetase, putative [Streptococcus sanguinis SK36] Length = 616 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWV 224 >gi|310792548|gb|EFQ28075.1| hypothetical protein GLRG_03219 [Glomerella graminicola M1.001] Length = 738 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 35/95 (36%), Gaps = 15/95 (15%) Query: 10 NPEHLDIALKKRHLEPQSEYILS---LDEKNRILIK-------KIEDIRARRNSNSAQIG 59 +P ++ + R ++P + I ++ + + L+K + E + R+ +I Sbjct: 443 DPAAVEE-IATRRVQPVLDEINEKAAIERERQELLKAEAEAKKRDEAKQKERDREIKEIN 501 Query: 60 QAI----AEGNLSLVDALKNETSTLKEQLPILEKE 90 + I + K E KE++ E Sbjct: 502 RKIIEHEKQEEKERKHREKQELKAKKEEVKAARAE 536 >gi|262046613|ref|ZP_06019574.1| phage protein [Lactobacillus crispatus MV-3A-US] gi|260573062|gb|EEX29621.1| phage protein [Lactobacillus crispatus MV-3A-US] Length = 377 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 8/67 (11%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Query: 26 QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD--ALKNETSTLKEQ 83 ++ ++ D N K+I+++ A+ + + + + D + + +L+++ Sbjct: 197 DADKLIKFDSDNSANQKRIDELNAQIKKLTDERDSLKSGNKQAENDRSEAQAKADSLEKE 256 Query: 84 LPILEKE 90 L + Sbjct: 257 LQGYRDK 263 >gi|242014184|ref|XP_002427775.1| myosin-9, putative [Pediculus humanus corporis] gi|212512229|gb|EEB15037.1| myosin-9, putative [Pediculus humanus corporis] Length = 1968 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R L+ S+ + L+ R L +++++ + + + + + + K + Sbjct: 1485 TRELDELSQKVEELERGRRALQAELDELVNNQGTADKNVHELEKAKRALETQLAEAKTQN 1544 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIP 106 L+++L + E + + +++ L + Sbjct: 1545 EELEDELQLSEDAKLRLEVNMQALRAQCE 1573 >gi|15239023|ref|NP_199671.1| ATSMC3 (ARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 3); ATP binding / transporter [Arabidopsis thaliana] gi|75333958|sp|Q9FJL0|SMC4_ARATH RecName: Full=Structural maintenance of chromosomes protein 4; Short=AtSMC4; Short=SMC protein 4; Short=SMC-4; AltName: Full=Chromosome-associated protein C; Short=AtCAP-C gi|10177350|dbj|BAB10693.1| chromosome condensation protein [Arabidopsis thaliana] gi|332008311|gb|AED95694.1| structural maintenance of chromosomes protein 4 [Arabidopsis thaliana] Length = 1241 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 2/89 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAIAEGNLSLVDALKNETS 78 R + L+ + ++IE + + N Q+ +A ++ +D LK Sbjct: 747 RQYRAAENEVSGLEMELAKSQREIESLNSEHNYLEKQLASLEAASQPKTDEIDRLKELKK 806 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + ++ +E E KL + I N Sbjct: 807 IISKEEKEIENLEKGSKQLKDKLQTNIEN 835 >gi|58698608|ref|ZP_00373505.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225630099|ref|YP_002726890.1| hypothetical protein WRi_002780 [Wolbachia sp. wRi] gi|58534878|gb|EAL58980.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225592080|gb|ACN95099.1| hypothetical protein WRi_002780 [Wolbachia sp. wRi] Length = 467 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 9/96 (9%) Query: 18 LKKRHLEPQSEYILS----LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL-----S 68 L+ + L + E + L EK L +K+E + +N S ++ + E Sbjct: 206 LENKGLNDRIETLREVQKALREKKHELSEKVEVLNKEKNKLSKEVKELREEQEKLYISLD 265 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 + E + KE L + + +++ C Sbjct: 266 KLQCKIKEVNKEKEDLRQVLSCSYSWQEFSEEMERC 301 >gi|326515338|dbj|BAK03582.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 856 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 13/92 (14%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEREKDKASK-----------A 442 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ E L+++L L+ + + + + Sbjct: 443 RLVDVRKELEDLRDKLQPLQMKYRKEKERIDE 474 >gi|326511825|dbj|BAJ92057.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 914 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 13/92 (14%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEREKDKASK-----------A 442 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ E L+++L L+ + + + + Sbjct: 443 RLVDVRKELEDLRDKLQPLQMKYRKEKERIDE 474 >gi|322386937|ref|ZP_08060561.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321269219|gb|EFX52155.1| proline--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 616 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ S E+ Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDAYSFHANYDSLDVAYDEYKSAYEK 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R +L ++ + G +G + + DL W+ Sbjct: 184 IFTRSELDFKAIIGDGGAMGGKDSQEFMAITPDRTDLNRWV 224 >gi|224049840|ref|XP_002193642.1| PREDICTED: similar to mitochondrial tumor suppressor 1 isoform 2 [Taeniopygia guttata] Length = 522 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 8/78 (10%) Query: 40 LIKKIEDIRARRNSNS--------AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 L KKI+++++ NS S QI + A + L+ E +LK L I ++ Sbjct: 346 LEKKIDELKSENNSLSEKLKLEEQKQIAKEKANLKNPQIMYLEQELESLKAVLEIKNEKL 405 Query: 92 HEVCSSLKKLISCIPNVP 109 H+ L K+ + N Sbjct: 406 HQQDIKLMKMEKLVENNT 423 >gi|114632648|ref|XP_001134873.1| PREDICTED: alpha-internexin isoform 2 [Pan troglodytes] Length = 499 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETSTLKEQL 84 L L+ +S + L Sbjct: 146 ELRDLRAQLEEASSARSQAL 165 >gi|118346341|ref|XP_976875.1| hypothetical protein TTHERM_00028790 [Tetrahymena thermophila] gi|89288416|gb|EAR86404.1| hypothetical protein TTHERM_00028790 [Tetrahymena thermophila SB210] Length = 706 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 5/109 (4%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 IR+ E L ++ LE Q++ D + + L ++ +++ N QI Q I + + Sbjct: 501 IRKELEEEQRNLIRQELEIQAKK----DREIKKLQQENQELIKEINQVKEQIKQIIEKTD 556 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + + ++ + + ++E L + KE +E S + KL E I Sbjct: 557 NTSAE-IEEKKNLMREDLDLKNKEIYEYESLINKLNQAKREQQKEINQI 604 >gi|29376028|ref|NP_815182.1| hypothetical protein EF1461 [Enterococcus faecalis V583] gi|29343490|gb|AAO81252.1| conserved hypothetical protein [Enterococcus faecalis V583] Length = 366 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 15/167 (8%), Positives = 54/167 (32%), Gaps = 9/167 (5%) Query: 5 QWIRQNPE-HLDIALKKRHLEPQSEYILSLDEKNR----ILIKKIEDIRARRNSNSAQIG 59 + I + E +D +K + +++ L E+ + L + + ++A+ + + +I Sbjct: 191 KLIIDSKEFEVDSIVKAKFESLEAK--LDAAEQRKANVEKLEGERDALKAQIDKLNKEID 248 Query: 60 QAIAEGNLSLV--DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +A + + +++ + + L S +++ + + Sbjct: 249 EAKKKEVTADALDKRVQDRVDLINKAQKFLGDSVDFTGKSDREIKESVIAKTSPDFKGDG 308 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 +++ I + + D + A + + Sbjct: 309 KSDDYIAAYFDSAVANVEKKGFTNPAAFNDAKDKDKEAAEDIEKQKN 355 >gi|332226175|ref|XP_003262264.1| PREDICTED: angiomotin [Nomascus leucogenys] Length = 1088 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 503 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 562 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 563 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 616 >gi|328958035|ref|YP_004375421.1| hypothetical protein CAR_c17470 [Carnobacterium sp. 17-4] gi|328674359|gb|AEB30405.1| hypothetical protein CAR_c17470 [Carnobacterium sp. 17-4] Length = 333 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 18/94 (19%) Query: 9 QNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSAQIGQ 60 +NP+ + + ++ L+ + ILS+D I I+ ++ + I Q Sbjct: 201 ENPDSISKTVLRKGLDSGTAFEILSID------IADIDVGRNIGASLQMEQAQADKNIAQ 254 Query: 61 AIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 A AE S+ + E ++ ++ E E Sbjct: 255 AKAEERRSMAIAQEQEMIAEVQKMRARVVEAEAE 288 >gi|163789497|ref|ZP_02183936.1| hypothetical protein CAT7_01977 [Carnobacterium sp. AT7] gi|159875351|gb|EDP69416.1| hypothetical protein CAT7_01977 [Carnobacterium sp. AT7] Length = 333 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 18/94 (19%) Query: 9 QNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSAQIGQ 60 +NP+ + + ++ L+ + ILS+D I I+ ++ + I Q Sbjct: 201 ENPDSISKTVLRKGLDSGTAFEILSID------IADIDVGRNIGASLQMEQAQADKNIAQ 254 Query: 61 AIAEGNLSLV----DALKNETSTLKEQLPILEKE 90 A AE S+ + E ++ ++ E E Sbjct: 255 AKAEERRSMAIAQEQEMIAEVQKMRARVVEAEAE 288 >gi|225429824|ref|XP_002280828.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296081785|emb|CBI20790.3| unnamed protein product [Vitis vinifera] Length = 449 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 21/247 (8%), Positives = 61/247 (24%), Gaps = 17/247 (6%) Query: 17 ALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL------- 69 +L+K+ E + + L K+++ ++ + + + N + Sbjct: 101 SLQKKGTSDAEEQLGKAYARASELEKQVDKLKKEIETQQKEKAALESRANEAERKTRELN 160 Query: 70 --VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 V++LK T K ++ E+ + K + E + + + + Sbjct: 161 SKVESLKKITDEQKTRIRKTERALQVAEEEMMKAKFDANSKTKELMEVHGA---WLPPWF 217 Query: 128 VGKKPSAIHLSREHFEIGEA-----LGLMDFDRATKLSGARFSVLTGHLAHLERALGQFM 182 S H+ L ++ + + A+ Sbjct: 218 ANHLISCQSFMEVHWNKHGKPALDTLTQKALEKKAQAQKWSEPHVETFKTKWIPAIKDQW 277 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSH 242 +++ T + ++ V P + + + Sbjct: 278 LEITTYLEPHVQLLCTKTVEAYEASKNAITPHVIKVQEFGDPYFQVAKKVSKPYIDQVAA 337 Query: 243 EIIESKS 249 Sbjct: 338 VTKPHVD 344 >gi|161528753|ref|YP_001582579.1| SMC domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160340054|gb|ABX13141.1| SMC domain protein [Nitrosopumilus maritimus SCM1] Length = 693 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 9/79 (11%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILE 88 + L+ K + L ++E++R + + + +I + L++ K +++++ E Sbjct: 219 IQLENKQKQLQSEVEELRKKVETEAPKIDKLNQLEARKRELIEYAKEAIHEIQQEISENE 278 Query: 89 KEEHEVCSSLKKLISCIPN 107 ++ + + Sbjct: 279 RKIRDCEGCFEYASLKEDL 297 >gi|145517734|ref|XP_001444750.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124412172|emb|CAK77353.1| unnamed protein product [Paramecium tetraurelia] Length = 1023 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 15/110 (13%) Query: 5 QWIRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNS-------NS 55 +++ + L L ++ + Q I L+ + I ++E + Sbjct: 315 NILKEEIDKLKQQLNDKNKQLQEQHNQITQLNNR----IAELERLLQESKQYKEKIQQLQ 370 Query: 56 AQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 +I Q A +G + LK + L +QL ++K E + K+ Sbjct: 371 TEIAQLKAIIQGKDEEIAILKQKIENLTDQLKEIDKIIQEKYALENKVAM 420 >gi|123452248|ref|XP_001314221.1| hypothetical protein [Trichomonas vaginalis G3] gi|121896428|gb|EAY01580.1| hypothetical protein TVAG_025780 [Trichomonas vaginalis G3] Length = 1006 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 5/111 (4%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV 70 E + + +R E + I L ++ ++++ N S QI + + Sbjct: 414 LEKKEDKILRRIEEDAANKIQKLQIIADNHKEQAQELQESANKQSKQINKM-----NIKI 468 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 L E LKE+L E+ +V L + + + + + + Sbjct: 469 IELLKENEELKEKLKKSEENIEDVTRKLYEKPQVQESDVIPKTAWYFNGFD 519 >gi|114632650|ref|XP_508011.2| PREDICTED: internexin neuronal intermediate filament protein, alpha isoform 3 [Pan troglodytes] Length = 361 Score = 38.2 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETSTLKEQL 84 L L+ +S + L Sbjct: 146 ELRDLRAQLEEASSARSQAL 165 >gi|332861482|ref|XP_521224.3| PREDICTED: angiomotin [Pan troglodytes] Length = 1083 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 503 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 562 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 563 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 616 >gi|331267089|ref|YP_004326719.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5] gi|326683761|emb|CBZ01379.1| prolyl-tRNA synthetase [Streptococcus oralis Uo5] Length = 617 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|322374996|ref|ZP_08049510.1| proline--tRNA ligase [Streptococcus sp. C300] gi|321280496|gb|EFX57535.1| proline--tRNA ligase [Streptococcus sp. C300] Length = 617 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|322388633|ref|ZP_08062233.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779] gi|321140553|gb|EFX36058.1| proline--tRNA ligase [Streptococcus infantis ATCC 700779] Length = 617 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|319945653|ref|ZP_08019905.1| proline--tRNA ligase [Streptococcus australis ATCC 700641] gi|319748252|gb|EFW00494.1| proline--tRNA ligase [Streptococcus australis ATCC 700641] Length = 616 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPSRTDLDRWV 224 >gi|315612430|ref|ZP_07887343.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296] gi|315315411|gb|EFU63450.1| proline--tRNA ligase [Streptococcus sanguinis ATCC 49296] Length = 617 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|309799607|ref|ZP_07693832.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302] gi|308116758|gb|EFO54209.1| prolyl-tRNA synthetase [Streptococcus infantis SK1302] Length = 617 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|306828825|ref|ZP_07462017.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249] gi|304429003|gb|EFM32091.1| proline--tRNA ligase [Streptococcus mitis ATCC 6249] Length = 617 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|297710816|ref|XP_002832054.1| PREDICTED: angiomotin-like [Pongo abelii] Length = 1088 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 503 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 562 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 563 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 616 >gi|293364306|ref|ZP_06611032.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307702728|ref|ZP_07639680.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037] gi|291317152|gb|EFE57579.1| proline--tRNA ligase [Streptococcus oralis ATCC 35037] gi|307623844|gb|EFO02829.1| prolyl-tRNA synthetase [Streptococcus oralis ATCC 35037] Length = 617 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|229829839|ref|ZP_04455908.1| hypothetical protein GCWU000342_01945 [Shuttleworthia satelles DSM 14600] gi|229791137|gb|EEP27251.1| hypothetical protein GCWU000342_01945 [Shuttleworthia satelles DSM 14600] Length = 494 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + I ++++ + L K++ + +++ + + L++E +LKE+ Sbjct: 127 ELSKDDISKIEKEAKELQDKLDKLNCELKDKDK-----LSDKQKNKIKDLEDEIDSLKEK 181 Query: 84 LPILEKEEHEVCSSLKK 100 + + + K+ Sbjct: 182 MKKDKGNKDLSEDMKKE 198 >gi|237722695|ref|ZP_04553176.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229448505|gb|EEO54296.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 841 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 56/169 (33%), Gaps = 16/169 (9%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL----------KNETS 78 + LD R K+ ++++ ++ + I + + V+ K E Sbjct: 530 DLSELDAMQREADNKVYALQSQISALEKENESLIKQIANASVEDAVPLRQKYNENKTEID 589 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 LK +L ++++ E+ + ++ S + I + ++ + + Sbjct: 590 RLKPELATWQQKQEEIAQAKEEAKSDNDVQTDDYYRIPAIMQDCKTAYNITWQDNGSWNG 649 Query: 139 REHFE---IGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 H I G++ F K++ + RA+ Q D Sbjct: 650 YTHVRKGTIPNINGIITFKATLKIARKPKYF---LGIKIHRAILQISWD 695 >gi|28209979|ref|NP_780923.1| glycyl-tRNA synthetase [Clostridium tetani E88] gi|59798585|sp|Q899G6|SYG_CLOTE RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|28202414|gb|AAO34860.1| glycyl-tRNA synthetase [Clostridium tetani E88] Length = 463 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 40/133 (30%), Gaps = 11/133 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + +P + SFR+E R +F + EL Sbjct: 176 TAQGIFVNFKNAIRTTRRKMPFGMAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 231 Query: 291 REEDSFTEHERMLSCAEEIL----KRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 + + E + R+ +L F + T D+E Sbjct: 232 KP-GTDLEWFEYWRDYSWNFLLSLGLAKDNLRIREHAKEELAFYSKATVDIEYLFPF--G 288 Query: 347 YREISSCSTCGNF 359 + E+ + ++ Sbjct: 289 WGELWGIADRTDY 301 >gi|301623400|ref|XP_002941006.1| PREDICTED: vimentin-like [Xenopus (Silurana) tropicalis] Length = 374 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 6/101 (5%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 E L L R + SL++KN+ L + E++ AR + G I++ Sbjct: 56 NEKEELQE-LNNRFAGY-IHKVHSLEQKNKALRTETEELTARL----KERGPGISDEYDK 109 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 LK L ++ + E E + + + Sbjct: 110 EFKELKELIEKLTKEKGMAEIERGNLEEEIDIWNAKCDEEL 150 >gi|168187059|ref|ZP_02621694.1| glycyl-tRNA synthetase [Clostridium botulinum C str. Eklund] gi|169295056|gb|EDS77189.1| glycyl-tRNA synthetase [Clostridium botulinum C str. Eklund] Length = 463 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 57/190 (30%), Gaps = 13/190 (6%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 L ++ + + + + + R M+ T Q + + T+ Sbjct: 122 WTNEELMNYIDENNIVCPKCGKKNYTDIRRFNLMFKTFQGVTEDSNA----EIYLRPETA 177 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + + K +P + SFR+E R +F + EL + Sbjct: 178 QGIFVNFKNAQRSSRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKP 233 Query: 293 EDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + L L + R +L F + T D+E + E Sbjct: 234 GTDLEWFHYWKNYCWKFLLDLGMTEESLRFRDHGEEELSFYSNATSDIEFLFPF--GWGE 291 Query: 350 ISSCSTCGNF 359 + + ++ Sbjct: 292 LWGVADRTDY 301 >gi|328876728|gb|EGG25091.1| hypothetical protein DFA_03337 [Dictyostelium fasciculatum] Length = 751 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 15/106 (14%) Query: 3 DIQWIRQNPEHLDIAL-----KKRHLE---------PQSEYILSLDEKNRILIKKIEDIR 48 D +++ QN + A+ ++ +E + I LD++ + ++ + +R Sbjct: 211 DPKFMEQNLTKIREAIDGAVKARKGMEHMREVYDKQKDIKSIEGLDKQIEVKKRETDALR 270 Query: 49 A-RRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 + I A G + V L + + E Sbjct: 271 KREQKVIQKVIELKKALGIGATVIPKIRRVQALYDYTKNSDDEISM 316 >gi|295695432|ref|YP_003588670.1| band 7 protein [Bacillus tusciae DSM 2912] gi|295411034|gb|ADG05526.1| band 7 protein [Bacillus tusciae DSM 2912] Length = 335 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 39/101 (38%), Gaps = 18/101 (17%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + + L+ + ILS+D I ++ ++ + Sbjct: 191 KDVLENPDKISRTVLDKGLDAGTAFEILSID------IADVDIGKNVGAQLQTDQAEADK 244 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKEEHE 93 QI QA AE ++ ++ ++ ++ E E Sbjct: 245 QIAQAKAEERRAMAVAREQEMRAYVEEMRAKVVEAESEVPR 285 >gi|257085282|ref|ZP_05579643.1| hypothetical protein EFKG_01077 [Enterococcus faecalis Fly1] gi|256993312|gb|EEU80614.1| hypothetical protein EFKG_01077 [Enterococcus faecalis Fly1] gi|315575486|gb|EFU87677.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315580073|gb|EFU92264.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] Length = 366 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 15/167 (8%), Positives = 54/167 (32%), Gaps = 9/167 (5%) Query: 5 QWIRQNPE-HLDIALKKRHLEPQSEYILSLDEKNR----ILIKKIEDIRARRNSNSAQIG 59 + I + E +D +K + +++ L E+ + L + + ++A+ + + +I Sbjct: 191 KLIIDSKEFEVDSIVKAKFESLEAK--LDAAEQRKANVEKLEGERDALKAQIDKLNKEID 248 Query: 60 QAIAEGNLSLV--DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +A + + +++ + + L S +++ + + Sbjct: 249 EAKKKEVTADALDKRVQDRVDLINKAQKFLGDSVDFTGKSDREIKESVIAKTSPDFKGDG 308 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 +++ I + + D + A + + Sbjct: 309 KSDDYIAAYFDSAVANVEKKGFTNPAAFNDAKDKDKEAAEDIEKQKN 355 >gi|220930251|ref|YP_002507160.1| methyl-accepting chemotaxis sensory transducer [Clostridium cellulolyticum H10] gi|220000579|gb|ACL77180.1| methyl-accepting chemotaxis sensory transducer [Clostridium cellulolyticum H10] Length = 494 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 47/119 (39%), Gaps = 6/119 (5%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA--RRNSN--SAQIGQAI--AE 64 E + ++ + L E++ IL +IE I +N+ S +I + Sbjct: 337 IEAARAGDAGKGFSIVAQDVRRLAEESNILTHQIESILKEMEQNALDVSKEITKEKIYIN 396 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 + S+ DA K+ + +K ++ +E++ + + + L E I + +N Sbjct: 397 NSNSITDATKDIFNKIKSEIHCIEEKTNNIKETSSNLYQSFELTDEEVNAISDNTEKNA 455 >gi|114632652|ref|XP_001134793.1| PREDICTED: similar to Internexin neuronal intermediate filament protein, alpha isoform 1 [Pan troglodytes] Length = 404 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETSTLKEQL 84 L L+ +S + L Sbjct: 146 ELRDLRAQLEEASSARSQAL 165 >gi|157116237|ref|XP_001658396.1| lava lamp protein [Aedes aegypti] gi|108876565|gb|EAT40790.1| lava lamp protein [Aedes aegypti] Length = 3407 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 22/126 (17%) Query: 2 LDI----QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 D+ + + + + LKK++++ Q L+ K L +++E++R Sbjct: 1289 HDLDAKNKELLEKLKKFAANLKKKNVQCQ-----ELEGKLASLQQELEELR--------- 1334 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + VD LK E L +++ L E H++ L + E + + Sbjct: 1335 ----KSAAAGMSVDDLKEENEQLSQKMHHLNNELHKLLQLKYNLETEKQAAQHETLELKE 1390 Query: 118 SANENI 123 Sbjct: 1391 RVQAME 1396 >gi|166064029|ref|NP_001106962.1| angiomotin isoform 1 [Homo sapiens] gi|74753814|sp|Q4VCS5|AMOT_HUMAN RecName: Full=Angiomotin gi|62996802|gb|AAY24451.1| angiomotin p130 isoform [Homo sapiens] gi|119623031|gb|EAX02626.1| angiomotin, isoform CRA_a [Homo sapiens] gi|168273148|dbj|BAG10413.1| angiomotin [synthetic construct] Length = 1084 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 504 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 563 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 564 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 617 >gi|322789355|gb|EFZ14667.1| hypothetical protein SINV_10357 [Solenopsis invicta] Length = 1714 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R ++ +E + L+ R L +++++ + + + + S + K++ Sbjct: 1258 TREMDELNEKVEELERGRRGLQSELDELVNNQGTADKNVHELEKAKRSLESQLQEQKSQV 1317 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIP 106 L+++L E + + +++ L + Sbjct: 1318 EELEDELQFTEDAKLRLEVNMQALRAQFE 1346 >gi|322500288|emb|CBZ35366.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1591 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 5/83 (6%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNSNSAQIGQAIAEG 65 + E + +LKKR+ E + + LD + R L +IE + A N + Q A E Sbjct: 1243 EKKEKVIYSLKKRNQELEKHKYV-LDHQIRELKGQIEPKQREIAELNQETKQ-QNANLEE 1300 Query: 66 NLSLVDALKNETSTLKEQLPILE 88 + L+ T LK+ + + Sbjct: 1301 QHTSNLTLRQNTEELKKDIAEQQ 1323 >gi|323344886|ref|ZP_08085110.1| hypothetical protein HMPREF0663_11646 [Prevotella oralis ATCC 33269] gi|323094156|gb|EFZ36733.1| hypothetical protein HMPREF0663_11646 [Prevotella oralis ATCC 33269] Length = 622 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 43/98 (43%), Gaps = 12/98 (12%) Query: 8 RQNPEHLDIALK---KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAI 62 R+ + LK KR + +LD + L+++ E ++ + +G A Sbjct: 532 RKRLDDFKNNLKNVVKRGED-------ALDNERGKLMRRYEQLKQEIQTYENNLGFLNAS 584 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 ++ SL+D + ++ LK+ L +++++ + + Sbjct: 585 SKKGNSLIDEMNHKVQKLKDDLELVKQKIKAIDRQNAE 622 >gi|315033864|gb|EFT45796.1| conserved hypothetical protein [Enterococcus faecalis TX0017] Length = 366 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 15/167 (8%), Positives = 54/167 (32%), Gaps = 9/167 (5%) Query: 5 QWIRQNPE-HLDIALKKRHLEPQSEYILSLDEKNR----ILIKKIEDIRARRNSNSAQIG 59 + I + E +D +K + +++ L E+ + L + + ++A+ + + +I Sbjct: 191 KLIIDSKEFEVDSIVKAKFESLEAK--LDAAEQRKANVEKLEGERDALKAQIDKLNKEID 248 Query: 60 QAIAEGNLSLV--DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +A + + +++ + + L S +++ + + Sbjct: 249 EAKKKEVTADALDKRVQDRVDLINKAQKFLGDSVDFTGKSDREIKESVIAKTSPDFKGDG 308 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 +++ I + + D + A + + Sbjct: 309 KSDDYIAAYFDSAVANVEKKGFTNPAAFNDAKDKDKEAAEDIEKQKN 355 >gi|146091106|ref|XP_001466446.1| hypothetical protein [Leishmania infantum JPCM5] gi|134070808|emb|CAM69166.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 1591 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 5/83 (6%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNSNSAQIGQAIAEG 65 + E + +LKKR+ E + + LD + R L +IE + A N + Q A E Sbjct: 1243 EKKEKVIYSLKKRNQELEKHKYV-LDHQIRELKGQIEPKQREIAELNQETKQ-QNANLEE 1300 Query: 66 NLSLVDALKNETSTLKEQLPILE 88 + L+ T LK+ + + Sbjct: 1301 QHTSNLTLRQNTEELKKDIAEQQ 1323 >gi|123440122|ref|XP_001310825.1| hypothetical protein [Trichomonas vaginalis G3] gi|121892611|gb|EAX97895.1| hypothetical protein TVAG_059600 [Trichomonas vaginalis G3] Length = 243 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 24/205 (11%), Positives = 57/205 (27%), Gaps = 15/205 (7%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR-------NSNSAQIGQA 61 ++PE L K+ + IL+L + N +K +++ ++ + I Sbjct: 22 KDPESARKNLLKKEHDLNKLEILNLKDANLKCEQKANELKKQKTNLANAIKAEQKLITTR 81 Query: 62 IAEGNLSLVDALKNETSTLKEQL-PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E L ++ E + Q+ I ++E++ + L I + + + Sbjct: 82 EKEYKEELEQQIELEKQKMNTQISEIKNEKENQRKDIINSLQRKIRQILDKLPRSNADGH 141 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRAT-------KLSGARFSVLTGHLAH 173 + I + + L D +R + + Sbjct: 142 MMLNIENDNIQQMKAEFHSMVLNWNSQRQLSDIERLNLKLRKTLLMIKENTYLNIPPHPK 201 Query: 174 LERALGQFMIDLHTSEHGYTEVSAP 198 L ++ Y Sbjct: 202 LFIEKSHEFETEYSQHTSYECHQTN 226 >gi|109096773|ref|XP_001093789.1| PREDICTED: keratin, type II cuticular Hb2-like [Macaca mulatta] Length = 513 Score = 38.2 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 44/87 (50%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L ++IE+++A+R I +A +G +L DA K Sbjct: 327 DNLRNRK-----NEILEMNKLIQRLQQEIENVKAQRCKLEGAITEAEQQGEAALNDA-KC 380 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 381 KLAGLEEALQKAKQDMACLLKEYQEVM 407 >gi|331702397|ref|YP_004399356.1| ATPase AAA-2 domain-containing protein [Lactobacillus buchneri NRRL B-30929] gi|329129740|gb|AEB74293.1| ATPase AAA-2 domain protein [Lactobacillus buchneri NRRL B-30929] Length = 680 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 33/82 (40%), Gaps = 9/82 (10%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R NP+ + + + L+ D+ L ++ E + +N+ S + + Sbjct: 275 RMNPDKAIDLIDQAGAKVAMGSSLTKDKS--TLQQEAEQLEKDKNAASK-------KEDF 325 Query: 68 SLVDALKNETSTLKEQLPILEK 89 L+++ +++Q+ ++ Sbjct: 326 EQAAKLRDKLDKVQDQIKNIDS 347 >gi|117928109|ref|YP_872660.1| hypothetical protein Acel_0901 [Acidothermus cellulolyticus 11B] gi|117648572|gb|ABK52674.1| protein of unknown function DUF164 [Acidothermus cellulolyticus 11B] Length = 237 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 +N + +L++R E + + IL + E+ L +I+ + A + + I + Sbjct: 88 ENLQSEIASLRRRRSELE-DQILQIMEQREALQAEIDALSADVAKLEGERAELIKRRDQ- 145 Query: 69 LVDALKNETSTLKE 82 L+ + E +T K Sbjct: 146 LLAEMDAEAATTKA 159 >gi|332707550|ref|ZP_08427588.1| hypothetical protein LYNGBM3L_47350 [Lyngbya majuscula 3L] gi|332353679|gb|EGJ33181.1| hypothetical protein LYNGBM3L_47350 [Lyngbya majuscula 3L] Length = 1026 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 9/64 (14%) Query: 20 KRHLEPQSEY-ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 KR+ + + + LD K + ++I+ +R RN I + S ++ L E Sbjct: 878 KRNYADEIKQQFIELDNKVKEKEEQIDKLRQERN--------LILQSPESNLEQLNQEID 929 Query: 79 TLKE 82 + Sbjct: 930 KESD 933 >gi|255022892|ref|ZP_05294878.1| DNA topoisomerase IV subunit A [Listeria monocytogenes FSL J1-208] Length = 303 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIRQNPEHLDIALKKR-HLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR + + D L + + + Q+E I+SL + R+ I ++++ S + Sbjct: 112 LDEVIKLIRGSKDKRDAKLNLQTNYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKSLA 170 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 171 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 202 >gi|146165924|ref|XP_001015865.2| hypothetical protein TTHERM_00266300 [Tetrahymena thermophila] gi|146145306|gb|EAR95620.2| hypothetical protein TTHERM_00266300 [Tetrahymena thermophila SB210] Length = 686 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 6/78 (7%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSN-SA-----QIGQAIAEGNLSLVDALKNETSTLKEQ 83 + ++ ++N LIK E + RN S QI +A + L+ L+ + L ++ Sbjct: 95 LNAMYQENEALIKINEKLAEERNIAQSKALINEQISEASQKHEKELIQDLEEKVMNLSKK 154 Query: 84 LPILEKEEHEVCSSLKKL 101 + E++ + Sbjct: 155 VKEQEQQIYSYEKIRPDY 172 >gi|148982342|ref|ZP_01816719.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3] gi|145960522|gb|EDK25885.1| threonyl-tRNA synthetase [Vibrionales bacterium SWAT-3] Length = 304 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 7/104 (6%) Query: 237 TNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSF 296 +++ + + LPLR R+E A G++R F + + E+ Sbjct: 1 VQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GIMRVRGFTQDDAHVFCTEDQVQ 57 Query: 297 TEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVW 340 E + + + VV L T + E+W Sbjct: 58 QEVKACIEMVYDTYTTFGFENIVVKLSTR----PEQRVGSDEMW 97 >gi|20807298|ref|NP_622469.1| carbamoylphosphate synthase large subunit (split gene in MJ) [Thermoanaerobacter tengcongensis MB4] gi|22095499|sp|Q8RBK0|CARB_THETN RecName: Full=Carbamoyl-phosphate synthase large chain; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain gi|20515809|gb|AAM24073.1| Carbamoylphosphate synthase large subunit (split gene in MJ) [Thermoanaerobacter tengcongensis MB4] Length = 1072 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 15/144 (10%), Positives = 37/144 (25%), Gaps = 10/144 (6%) Query: 14 LDIALKKRHLEPQ-SEYILSLDEKNRILIKKIEDIRARR--NSNSAQIGQAIAEGNLSLV 70 + AL +R+++ + +D+ + I ++ N S +I + Sbjct: 435 IAEAL-RRNIDIDYINDVTKIDKWFLNKLSNIVNMEKEIEENELSKEI--LKKAKRMGFS 491 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 D +KE+ + + + E I + Sbjct: 492 DREIATIKGIKEE----DVRTLRKKYGIYPSYKMVDTCAAEFESITQYIYSTYCEEDEVE 547 Query: 131 KPSAIHLSREHFEIGEALGLMDFD 154 + ++FD Sbjct: 548 THDIPKVIVIGSGPIRIGQGIEFD 571 >gi|320167376|gb|EFW44275.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 1156 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 59/192 (30%), Gaps = 15/192 (7%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN-SNSAQIG-----QA 61 ++N E KKR + + + L+ +E+ + E +A++ + +I +A Sbjct: 370 KKNQE--REDAKKRKEDEKRQKDLAKEEER----VRKEAAKAQQEAERAKRIADEAALKA 423 Query: 62 IAEGNLSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E + + + ++++L ++ E L K S P + A Sbjct: 424 KREADKENKRLADEAAKAKAIEDELAKKKQAEARFFGMLMKGSSGAPQTTNPVKAVSEEA 483 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALG 179 + KP+ R + E +D A + S + L E Sbjct: 484 TVETKAKDNKNKPNEAPCVRIKW-TAEDTQRLDTLLALQASATPTFLHEAKLRARELKRR 542 Query: 180 QFMIDLHTSEHG 191 Sbjct: 543 WHASRRELVRRH 554 >gi|319411687|emb|CBQ73731.1| conserved hypothetical protein [Sporisorium reilianum] Length = 1848 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Query: 1 MLD-IQWIRQNPEH-LD-IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+D + +R++ E A K+ +++ + L+ + L ++E+ + R S + Sbjct: 726 MVDEVNQLRRDLEQSYRNEAEAKQEAMEEADRVAELEAQAHELHVELEEAKTARIDASKR 785 Query: 58 IGQAIAEGNLSLVD--ALKNETSTLKEQLPI 86 I ++EG+ + + + L EQL Sbjct: 786 IEALLSEGSSAEGELRTAQARIDELTEQLSN 816 >gi|154421886|ref|XP_001583956.1| hypothetical protein [Trichomonas vaginalis G3] gi|121918200|gb|EAY22970.1| hypothetical protein TVAG_077170 [Trichomonas vaginalis G3] Length = 369 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 35/77 (45%) Query: 38 RILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSS 97 + + +KI I+ N S + Q+ G+ + +L ++ L +++ L+++ E+ Sbjct: 256 KKMQQKISAIQNEINKRSGIVVQSTKSGSRADSASLFMKSKELIDEIAKLQEKNWELEER 315 Query: 98 LKKLISCIPNVPLEEVP 114 + + + + E + Sbjct: 316 VAFSRNSLKMMADEIIK 332 >gi|121701767|ref|XP_001269148.1| heat shock protein/chaperonin HSP78, putative [Aspergillus clavatus NRRL 1] gi|119397291|gb|EAW07722.1| heat shock protein/chaperonin HSP78, putative [Aspergillus clavatus NRRL 1] Length = 798 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 7/72 (9%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I LD + ++E +R + S + L + LK + K+ + Sbjct: 330 DEIRELDRDITTIQIELESLRKETDVVSRE-------RRDKLQEDLKAKQEESKKLTEVW 382 Query: 88 EKEEHEVCSSLK 99 EKE+ E+ + + Sbjct: 383 EKEKAEIETVKR 394 >gi|70996054|ref|XP_752782.1| nuclear segregation protein (Bfr1) [Aspergillus fumigatus Af293] gi|44890008|emb|CAF32126.1| nuclear segregation protein, putative [Aspergillus fumigatus] gi|66850417|gb|EAL90744.1| nuclear segregation protein (Bfr1), putative [Aspergillus fumigatus Af293] Length = 510 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 16/149 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR-------------NSNS 55 +N E +D + + + S + +DE R + I +R +R N Sbjct: 118 KNVEDIDREIARLEKQVDSGTLRLVDE--RKALSDISTLRKQRKNFAGLDEQQKVINDLK 175 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 AQI + AL ++ + ++++L ++ E +L + E Sbjct: 176 AQIATLKKTLDNPEAKALSDKYTEIQKELDAIKAEHDSAFKNLNA-LRDERTKLHAEQQK 234 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEI 144 +A I + + E + I Sbjct: 235 KWNAIREIKDNYYKARKAYKEYEDEAWRI 263 >gi|297687306|ref|XP_002821158.1| PREDICTED: alpha-internexin-like [Pongo abelii] Length = 498 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETSTLKEQL 84 L L+ +S + L Sbjct: 146 ELRDLRAQLEEASSARSQAL 165 >gi|296877243|ref|ZP_06901283.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912] gi|296431763|gb|EFH17570.1| proline--tRNA ligase [Streptococcus parasanguinis ATCC 15912] Length = 616 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREGSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R + ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGIDFKAIIGDGGAMGGKDSQEFMAVTPARTDLDRWV 224 >gi|188588755|ref|YP_001919624.1| glycyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|251778464|ref|ZP_04821384.1| glycine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188499036|gb|ACD52172.1| glycyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|243082779|gb|EES48669.1| glycine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 463 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 15/183 (8%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 176 TAQGIFVNFKAVQRSSRKKVPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 231 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + H+ L L++ + + +L F + T D+E + Sbjct: 232 KPGTDLEWHKYWKDYCWNFLLNLNVKTENLRMRDHGEEELSFYSNATSDIEYLFPF--GW 289 Query: 348 REISSCSTCGNFQSRRMN------SRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 E+ + ++ R+ Y D + + + S A L ++E Y Sbjct: 290 GELWGIADRTDYDLRKHQEHSGQDLNYLDQTNNEKYIPYVIEPSLGADRVTLAFLIEAYD 349 Query: 402 NAD 404 + Sbjct: 350 EEE 352 >gi|281356304|ref|ZP_06242796.1| hypothetical protein Vvad_PD1674 [Victivallis vadensis ATCC BAA-548] gi|281316996|gb|EFB01018.1| hypothetical protein Vvad_PD1674 [Victivallis vadensis ATCC BAA-548] Length = 554 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 49/173 (28%), Gaps = 23/173 (13%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILS----LDEKNRILIKKIEDIRARRNSNSAQIG 59 I + R+ +++ +K+ + I L + N L K+++++ + IG Sbjct: 309 ISFFRKQR-IIELKNRKKGEASSIDEIQQFNEMLWKDNDDLQKRVDELEGK-------IG 360 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + S L ++ L+ + E + ++ Sbjct: 361 ELQGKCEEYEGQE-----SRLNSKIENLQHQLTEKKQHHP------QVTADKCFYNYPNS 409 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 E L P I + + E D + + L Sbjct: 410 LEMALHWFQKLFPGHIVFTADAMENLADSTFKDTETFWNTLVTMHTFLWDWCI 462 >gi|123486793|ref|XP_001324799.1| Dynein heavy chain family protein [Trichomonas vaginalis G3] gi|121907688|gb|EAY12576.1| Dynein heavy chain family protein [Trichomonas vaginalis G3] Length = 3997 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 IQ +R + + L+ + R ++ I LDE + +K++ A+ N Q Sbjct: 2645 IQKLRVDTDLLEQSYLTRKEAIEARRI-KLDEDKKDKEQKLQATLAKLNELEQQNSTLKP 2703 Query: 64 EGNL--SLVDAL-KNETSTL 80 E + ++ + KNE T+ Sbjct: 2704 ETEKAYANLEQMTKNEVETI 2723 >gi|90419768|ref|ZP_01227677.1| putative Flp pilus assembly protein TadB, type II/IV secretion system [Aurantimonas manganoxydans SI85-9A1] gi|90335809|gb|EAS49557.1| putative Flp pilus assembly protein TadB, type II/IV secretion system [Aurantimonas manganoxydans SI85-9A1] Length = 335 Score = 38.2 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 25/63 (39%), Gaps = 7/63 (11%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R + E +R L+ + + D++ + + ++++ +R+ G+ + L Sbjct: 44 RDDTE-------RRSLKVARDRLKEQDKRRKTIQSSLKELESRQKERDKHTGKLTLQRQL 96 Query: 68 SLV 70 Sbjct: 97 EQA 99 >gi|332212722|ref|XP_003255468.1| PREDICTED: alpha-internexin [Nomascus leucogenys] Length = 499 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETSTLKEQL 84 L L+ +S + L Sbjct: 146 ELRDLRAQLEEASSARSQAL 165 >gi|330924340|ref|XP_003300601.1| hypothetical protein PTT_11890 [Pyrenophora teres f. teres 0-1] gi|311325176|gb|EFQ91293.1| hypothetical protein PTT_11890 [Pyrenophora teres f. teres 0-1] Length = 790 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 31/73 (42%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I LD + + ++E +R + S + + + + D +K T +++ L Sbjct: 328 DAIQELDRQIMTIQIELESLRKETDIASKERRERLEQSLKEKQDEVKVLTEKWEKERKEL 387 Query: 88 EKEEHEVCSSLKK 100 ++ ++ + + Sbjct: 388 DEIKNAQENLERA 400 >gi|291234167|ref|XP_002737030.1| PREDICTED: Centromere protein F-like, partial [Saccoglossus kowalevskii] Length = 1906 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 30/282 (10%), Positives = 84/282 (29%), Gaps = 13/282 (4%) Query: 33 LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEH 92 L+ KN+ L ++++ R + + + E L D + ++ T+ + ++ Sbjct: 379 LERKNKQLTQELDCQRHNAEAARKALEDRMKEKEKELHDEISQQSKTIMGMDKQFNEMKN 438 Query: 93 EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA----IHLSREHFEIGEAL 148 ++ + + +V + ++ I + + Sbjct: 439 KMQQEINHSRNEYNSVQSKFEKAEQQNLILEKRIKEFEQKVHSADEIKKNHDSVIADLNG 498 Query: 149 GLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 + + ++ ++ + + +LE+ + DL SE+ + +L +D + Sbjct: 499 KIAEVEKEKHSIASKLELSESRVCNLEKQASKAKEDLQLSENVVCSMKGTILEKDLELEC 558 Query: 209 TGQIPKFADDMFCTTDGRWLIPTSE-----VSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 + T + +E +L + L + + Sbjct: 559 VRSDCQDETSKMVVTLENYKKQYAELEKKHGGALDLAKKHEHDVSQLTGKLLESE----A 614 Query: 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSC 305 E G R+ + K E S ++ + L Sbjct: 615 EVGKYQVLLEECKRELEACKKENEMQQENGKSVSQEMQKLKN 656 >gi|290986101|ref|XP_002675763.1| predicted protein [Naegleria gruberi] gi|284089361|gb|EFC43019.1| predicted protein [Naegleria gruberi] Length = 1114 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 40/100 (40%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E I SL+E+ + + KI + ++ + + A+ + LK+E L+++L IL Sbjct: 496 EKIRSLEERKQEIFSKITILTKEKDQLAKKEEYLEAKKKRDEIQELKSEQEKLQDELCIL 555 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 ++E+ + ++ + + + Sbjct: 556 KEEDLPNDIEEICMWLRALHITSQFILQSDYPIDISQFIY 595 >gi|283957137|ref|ZP_06374601.1| putative cell division protein [Campylobacter jejuni subsp. jejuni 1336] gi|283791313|gb|EFC30118.1| putative cell division protein [Campylobacter jejuni subsp. jejuni 1336] Length = 946 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 16/153 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEY------ILSLDEKNRILIKKIEDIRARRNSNSA 56 DI+ I N + + K++++E I + + + R + K E + + Sbjct: 278 DIKQIDTNKNLDEPSYKRKNIEIPVSKQEVKPKIFTKELELRENLIKKEKLEQEYKAYQN 337 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I L + +K E L+E I E I E I Sbjct: 338 EI----------LENKVKQEIKKLEEYDAINSSNIIEGNKYSFNNSKTIKTETEESNKIN 387 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + N + P L+ + E Sbjct: 388 ENKNPDKADNIFEFTPIVEELNHPYIEPTPIKN 420 >gi|270292053|ref|ZP_06198268.1| proline--tRNA ligase [Streptococcus sp. M143] gi|270279581|gb|EFA25423.1| proline--tRNA ligase [Streptococcus sp. M143] Length = 617 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDLTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPARTDLDRWV 224 >gi|253743359|gb|EES99777.1| Coiled-coil protein [Giardia intestinalis ATCC 50581] Length = 1086 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 51/100 (51%), Gaps = 3/100 (3%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 D++++R++ ++L ++R + E +L E++ L +K ++ +++ SAQ+ Sbjct: 594 DLEFLRESADNLARKCERRG-SAKVELQAALKERDIQLSEKTIELETQKSEFSAQLASLE 652 Query: 63 A--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 A + + L+ L+ E L Q+ L+ E + + L K Sbjct: 653 ARIQSDGELLRKLRLEKEELTTQIDTLKHETIRLQADLDK 692 >gi|189189086|ref|XP_001930882.1| heat shock protein 78, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972488|gb|EDU39987.1| heat shock protein 78, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 790 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 31/73 (42%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I LD + + ++E +R + S + + + + D +K T +++ L Sbjct: 328 DAIQELDRQIMTIQIELESLRKETDIASKERRERLEQSLKEKQDEVKVLTEKWEKERKEL 387 Query: 88 EKEEHEVCSSLKK 100 ++ ++ + + Sbjct: 388 DEIKNAQENLERA 400 >gi|118087691|ref|XP_001231317.1| PREDICTED: similar to CDC42 binding protein kinase alpha (DMPK-like) isoform 2 [Gallus gallus] Length = 1747 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 48/125 (38%), Gaps = 17/125 (13%) Query: 2 LDIQWIRQNPEHLDI---------------ALKKRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L + +R L+ S I + +++ R L ++ ED Sbjct: 487 LEIKSLKEEIEKLKKQVTDSGHLEQQLEEASTARRELDDASRQIKAFEKQVRTLKQERED 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 + +S ++ E + E S + E+L L ++ ++ L+ Sbjct: 547 LNKELAESSDRLKSQAKELKDAHSQRKLAMQEFSEMNERLTDLHSQKQKLARQLRDKEEE 606 Query: 105 IPNVP 109 + V Sbjct: 607 MEVVM 611 >gi|313661517|ref|NP_001186372.1| serine/threonine-protein kinase MRCK alpha [Gallus gallus] Length = 1718 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 48/125 (38%), Gaps = 17/125 (13%) Query: 2 LDIQWIRQNPEHLDI---------------ALKKRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L + +R L+ S I + +++ R L ++ ED Sbjct: 487 LEIKSLKEEIEKLKKQVTDSGHLEQQLEEASTARRELDDASRQIKAFEKQVRTLKQERED 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 + +S ++ E + E S + E+L L ++ ++ L+ Sbjct: 547 LNKELAESSDRLKSQAKELKDAHSQRKLAMQEFSEMNERLTDLHSQKQKLARQLRDKEEE 606 Query: 105 IPNVP 109 + V Sbjct: 607 MEVVM 611 >gi|322493038|emb|CBZ28323.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1605 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 5/83 (6%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNSNSAQIGQAIAEG 65 + E + +LKKR+ E + + LD + R L +IE + A N + Q A E Sbjct: 1237 EKKEKVIYSLKKRNQELEKHKYV-LDHQIRELKGQIEPKQREIAELNQETKQ-QNANLEE 1294 Query: 66 NLSLVDALKNETSTLKEQLPILE 88 + L+ T LK+ + + Sbjct: 1295 QHTSNLTLRQNTEELKKDIAEQQ 1317 >gi|306820562|ref|ZP_07454193.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551379|gb|EFM39339.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 785 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 25/70 (35%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 ++ E + + L+ R Q L+E +E+ + + + + + + Sbjct: 541 EDAEFIRLKLENRERRAQQNSEKILEEAKNKARSLVEEAKNEADEINKVLNKLKKSSDYK 600 Query: 69 LVDALKNETS 78 +D NE Sbjct: 601 NIDKKMNEIK 610 >gi|301621454|ref|XP_002940068.1| PREDICTED: syncoilin-like [Xenopus (Silurana) tropicalis] Length = 318 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 1/89 (1%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E + L ++ R L + +R +RNS QI + V + + L++ Sbjct: 231 EELQKLRDELRPLQGEASKMRVQRNSLQEQIVLLKRK-REEEVHLYREQIQELEDSRRET 289 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + K+L ++ E Sbjct: 290 KITVQLQQQQNKELEDLRRSLAHELAIYK 318 >gi|290995278|ref|XP_002680222.1| predicted protein [Naegleria gruberi] gi|284093842|gb|EFC47478.1| predicted protein [Naegleria gruberi] Length = 1044 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 52/180 (28%), Gaps = 22/180 (12%) Query: 2 LDIQWI--RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIK---KIEDIRARRNSNSA 56 D Q+I R+ E + + + +DE+ R + ++E + NS+ Sbjct: 28 HDPQYIIDREELEKVR-----------IDALYKIDEERRKNQQKRRELEVLEKAGKDNSS 76 Query: 57 QIGQAIAEGNLSLV----DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 A + + + + K + + L S E Sbjct: 77 SSNSAYHNNKVKEILQSGENIIKLMVGGKMFITSMSTLNKRDNMIKTMLNSDFKVDTDEN 136 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 I + + + + S + + E + ++ +L TG L+ Sbjct: 137 GCILLNDSNPEYFPIILEHIRTG--STNYVGLWENSNEENIEKLKELLVESDYFGTGKLS 194 >gi|145503485|ref|XP_001437718.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124404872|emb|CAK70321.1| unnamed protein product [Paramecium tetraurelia] Length = 2671 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 6/68 (8%) Query: 1 MLDIQ--WIRQNPEHLDIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 ML + + +N E + L K R + I + + + ++ E I+ N + Sbjct: 2607 MLKTKKGMLEKNKERYENGLIKLRSTQALVAEI---EIQVKEKQQEAEQIKNEANQVAEV 2663 Query: 58 IGQAIAEG 65 +GQ ++G Sbjct: 2664 VGQRKSKG 2671 >gi|118087687|ref|XP_001231233.1| PREDICTED: similar to CDC42 binding protein kinase alpha (DMPK-like) isoform 1 [Gallus gallus] Length = 1731 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 48/125 (38%), Gaps = 17/125 (13%) Query: 2 LDIQWIRQNPEHLDI---------------ALKKRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L + +R L+ S I + +++ R L ++ ED Sbjct: 487 LEIKSLKEEIEKLKKQVTDSGHLEQQLEEASTARRELDDASRQIKAFEKQVRTLKQERED 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 + +S ++ E + E S + E+L L ++ ++ L+ Sbjct: 547 LNKELAESSDRLKSQAKELKDAHSQRKLAMQEFSEMNERLTDLHSQKQKLARQLRDKEEE 606 Query: 105 IPNVP 109 + V Sbjct: 607 MEVVM 611 >gi|34365522|tpg|DAA01288.1| TPA_exp: replicase/helicase/endonuclease [Danio rerio] Length = 3007 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 21/235 (8%), Positives = 57/235 (24%), Gaps = 19/235 (8%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 + E + + KR E +L ++ + K ++ +NS + + +++ Sbjct: 1108 HKERVK-NMSKRKYEQN-----ALHKERVKNMSK---MKYEQNSLHKERVKNMSKMKYEQ 1158 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 K + + +L + H+ N + I + + Sbjct: 1159 NALHKEKVKCMS-RLKYQQNMLHKKTVKEMSKRKYKLNQLHRQNVIAINKKKYHENAEHK 1217 Query: 130 K-----KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF-MI 183 K +E + + + D V L + Sbjct: 1218 KRVKAGMKHKREQIKEKAKQFDFVMQRFLDLIKDGPDFVCCVCQRLLFRHQVLHCNRDYY 1277 Query: 184 DLHTSEHGYTEVSAPLL---VRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVS 235 + Y + + + ++ + I E+ Sbjct: 1278 NRKAIGSIYDKCITEEYLHKCNSTCVMPCQWLDSPRGKLWICYTCHYKINKGEIP 1332 >gi|270002051|gb|EEZ98498.1| hypothetical protein TcasGA2_TC000998 [Tribolium castaneum] Length = 608 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 32/82 (39%), Gaps = 9/82 (10%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSN---------SAQIGQAIAEGNLSLVDALKNETS 78 E I L+E+ + L E++ R+N S + A + + A + E Sbjct: 404 EMIRRLEEQLKQLQAAKEELEKRQNELQAMMERLEESKNMEAAERQKLEEEIQAKQLEVQ 463 Query: 79 TLKEQLPILEKEEHEVCSSLKK 100 +++++ + E + ++ Sbjct: 464 RIQDEVTAKDNETKRLQEEVEN 485 >gi|242398545|ref|YP_002993969.1| hypothetical protein TSIB_0555 [Thermococcus sibiricus MM 739] gi|242264938|gb|ACS89620.1| hypothetical protein TSIB_0555 [Thermococcus sibiricus MM 739] Length = 803 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 + R E I SL+E + + ++IE+ ++ + +I + +++ N+ ++ L+ E Sbjct: 395 RDRVKHEMEEEIKSLEEIVKQIRREIEEAENQKRTIKEEI-ERVSKINVERIEQLQKEIE 453 Query: 79 TLKEQLPILEKE 90 +KE+L E Sbjct: 454 EMKEKLAKHYTE 465 >gi|238055365|sp|B9EKI3|TMF1_MOUSE RecName: Full=TATA element modulatory factor; Short=TMF; AltName: Full=Androgen receptor coactivator 160 kDa protein; AltName: Full=Androgen receptor-associated protein of 160 kDa gi|223462447|gb|AAI50932.1| TATA element modulatory factor 1 [Mus musculus] Length = 1091 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Query: 14 LDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL--V 70 + L R + ++ + DE+ + L+++ E + ++ NS I + A+ + + Sbjct: 529 IKEELATRLNSSQTADLLKEKDEQIQGLMEEGEKLSKQQLHNSNIIKKLRAKDKDNENVI 588 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 L + L+E+L L + K+ I Sbjct: 589 AKLNRKAKELEEELQHLRQVLDGKEEVEKQHRENIK 624 >gi|212542595|ref|XP_002151452.1| heat shock protein/chaperonin HSP78, putative [Penicillium marneffei ATCC 18224] gi|210066359|gb|EEA20452.1| heat shock protein/chaperonin HSP78, putative [Penicillium marneffei ATCC 18224] Length = 787 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 7/72 (9%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E IL LD + + ++E +R + S + L + LK + +K+ + I Sbjct: 328 ESILELDREITTIQIELESLRKETDVTSKE-------RRAKLEEMLKTKQEEVKKLMDIW 380 Query: 88 EKEEHEVCSSLK 99 KE+ E+ + Sbjct: 381 NKEKEEIEGIKR 392 >gi|159131536|gb|EDP56649.1| nuclear segregation protein (Bfr1), putative [Aspergillus fumigatus A1163] Length = 510 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 16/149 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR-------------NSNS 55 +N E +D + + + S + +DE R + I +R +R N Sbjct: 118 KNVEDIDREIARLEKQVDSGTLRLVDE--RKALSDISTLRKQRKNFAGLDEQQKVINDLK 175 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 AQI + AL ++ + ++++L ++ E +L + E Sbjct: 176 AQIATLKKTLDNPEAKALSDKYTEIQKELDAIKAEHDSAFKNLNA-LRDERTKLHAEQQK 234 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEI 144 +A I + + E + I Sbjct: 235 KWNAIREIKDNYYKARKAYKEYEDEAWRI 263 >gi|58331917|ref|NP_001011070.1| rabaptin, RAB GTPase binding effector protein 1 [Xenopus (Silurana) tropicalis] gi|54038484|gb|AAH84452.1| rabaptin, RAB GTPase binding effector protein 1 [Xenopus (Silurana) tropicalis] Length = 853 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + E +R+ +IG + Sbjct: 147 RESVEREIAELRRRLSEGQQEE--NLESDMKKAQEDAEKLRSVVMPMEKEIGTLKEKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEEKIKELEASKMKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLMMQDMKRMESV 304 >gi|124487429|ref|NP_001074580.1| TATA element modulatory factor [Mus musculus] Length = 1091 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Query: 14 LDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL--V 70 + L R + ++ + DE+ + L+++ E + ++ NS I + A+ + + Sbjct: 529 IKEELATRLNSSQTADLLKEKDEQIQGLMEEGEKLSKQQLHNSNIIKKLRAKDKDNENVI 588 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 L + L+E+L L + K+ I Sbjct: 589 AKLNRKAKELEEELQHLRQVLDGKEEVEKQHRENIK 624 >gi|331268359|ref|YP_004394851.1| glycyl-tRNA synthetase [Clostridium botulinum BKT015925] gi|329124909|gb|AEB74854.1| glycyl-tRNA synthetase [Clostridium botulinum BKT015925] Length = 463 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 57/185 (30%), Gaps = 13/185 (7%) Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L ++ + + + + + R M+ T Q T++ T++ Sbjct: 127 LMNYIDENNIVCPKCGKKNYTDIRRFNLMFKTFQGVTED----TTSEIYLRPETAQGIFV 182 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + + K +P + SFR+E R +F + EL + Sbjct: 183 NFKNAQRTSRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKPGTDLE 238 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLYREISSCS 354 + L L + + +L F + T D+E + E+ + Sbjct: 239 WFHYWKDYCWKFLLDLGMTEENLRFRDHGEEELSFYSNATSDIEFLFPF--GWGELWGIA 296 Query: 355 TCGNF 359 ++ Sbjct: 297 DRTDY 301 >gi|312978020|ref|ZP_07789765.1| conserved hypothetical protein [Lactobacillus crispatus CTV-05] gi|310894995|gb|EFQ44064.1| conserved hypothetical protein [Lactobacillus crispatus CTV-05] Length = 349 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 8/67 (11%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Query: 26 QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD--ALKNETSTLKEQ 83 ++ ++ D N K+I+++ A+ + + + + D + + +L+++ Sbjct: 169 DADKLIKFDSDNSANQKRIDELNAQIKKLTDERDSLKSGNKQAENDRSEAQAKADSLEKE 228 Query: 84 LPILEKE 90 L + Sbjct: 229 LQGYRDK 235 >gi|238922191|ref|YP_002935705.1| prephenate dehydratase [Eubacterium eligens ATCC 27750] gi|238873863|gb|ACR73571.1| prephenate dehydratase [Eubacterium eligens ATCC 27750] Length = 380 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 36/108 (33%), Gaps = 17/108 (15%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 MLD+ IR N + +D ++ L E+ L ++ + + ++ Sbjct: 1 MLDLNEIRNNIDKID------------SQLVELFEERMKLTTEVAEYKIE---TGKKV-- 43 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + ++++K I + + +S K + + Sbjct: 44 LDPAREKAKLESVKKLVKNPDNVHAIDDLFAQIMANSRKNQYMLLEKM 91 >gi|295660624|ref|XP_002790868.1| intracellular protein transport protein [Paracoccidioides brasiliensis Pb01] gi|226281120|gb|EEH36686.1| intracellular protein transport protein [Paracoccidioides brasiliensis Pb01] Length = 901 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 42/105 (40%), Gaps = 12/105 (11%) Query: 4 IQWI-----RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR-NSNSAQ 57 I+ I R + E + L++R+ + +++ + E+ R + +++ A S Sbjct: 694 IKHINETLQRNHEEEIRT-LEERNKQSRNDLLRQHGEQLRDIDTQLKQKSAEYEKKASK- 751 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 I E + + V LKN LK L K+ + + + Sbjct: 752 ----IRERHEAEVADLKNTIQELKASLEKAGKDHIQDLQTAHEEY 792 >gi|157310137|emb|CAJ31810.1| 101 kDa heat shock protein [Aegilops umbellulata] Length = 563 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 13/92 (14%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 44 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASK-----------A 92 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ E L+++L L+ + + + + Sbjct: 93 RLVDVRKELDDLRDKLQPLQMKYRKEKERIDE 124 >gi|145507228|ref|XP_001439569.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124406764|emb|CAK72172.1| unnamed protein product [Paramecium tetraurelia] Length = 417 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 18/133 (13%) Query: 11 PEHLDIALKKRHLEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSAQIGQ---- 60 + L+ R PQ I L N+ L + + +R ++ Q Sbjct: 169 FDLQQENLRLRGNAPQISYVQDDSKINELINANKELKIQEQGLRQSNKQLQDELDQWKLR 228 Query: 61 --------AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + +G + LK + S L + L +++ ++KL + + E Sbjct: 229 YKQLQESNSKNQGADDEIRLLKKKISNLTDDLKSSQEQNEFKDQEIRKLKLLMNDKDNEL 288 Query: 113 VPIGTSANENILI 125 + E + Sbjct: 289 ESLDQRIREMEMQ 301 >gi|55981039|ref|YP_144336.1| hypothetical protein TTHA1070 [Thermus thermophilus HB8] gi|55772452|dbj|BAD70893.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 411 Score = 37.8 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 15 DIALKKRHLEPQSEY-ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 A + R LE ++ I +L+++ + ++++++ + + +I + + L Sbjct: 32 AQAARARALEEEAAKRIQALNQELAQISQRLKNLLGEKAALEKEIARL-----EAERRRL 86 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKK 100 K ET+ LKE++ E ++ L+ Sbjct: 87 KQETARLKEEVRQTEARIAKLEKDLEA 113 >gi|330799824|ref|XP_003287941.1| hypothetical protein DICPUDRAFT_33276 [Dictyostelium purpureum] gi|325082019|gb|EGC35515.1| hypothetical protein DICPUDRAFT_33276 [Dictyostelium purpureum] Length = 863 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 44/114 (38%), Gaps = 12/114 (10%) Query: 3 DIQWIRQNP----EHL---DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 D++ I N + + L +R L + + ++++ + L K+IE + R++ Sbjct: 594 DLKAIIDNIVNEKDLIQSEANNLAQR-LSNEIDKSNDMEKQVKDLQKEIESMLTTRDNLI 652 Query: 56 AQIGQAIAEG----NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 ++ + ++ N D L+ E +K + E + + I Sbjct: 653 KELEEIQSKNTYGANKETEDRLQQELQEIKLKQKEQEDRFSAERQTWESNRWEI 706 >gi|308468744|ref|XP_003096613.1| hypothetical protein CRE_01249 [Caenorhabditis remanei] gi|308242485|gb|EFO86437.1| hypothetical protein CRE_01249 [Caenorhabditis remanei] Length = 666 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 31/78 (39%) Query: 26 QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLP 85 + +++E+ RIL+++++++R + + + I A K + Sbjct: 201 DVCKLRTMEEEKRILLEEVDELRDEKKALADDIHTKKATLKAESKKPFKKMVIECAKHYA 260 Query: 86 ILEKEEHEVCSSLKKLIS 103 + E ++ S K L Sbjct: 261 LCETLTPKLIKSKKNLQL 278 >gi|297680819|ref|XP_002818160.1| PREDICTED: nuclear factor erythroid 2-related factor 3-like [Pongo abelii] Length = 694 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L K E ++ + + I Sbjct: 579 IRDIRRRGKNK-VAAQNCRKRKLDI----ILNLEDDVCNLQAKKETLKREQAQCNKAINI 633 Query: 61 AIAE 64 + Sbjct: 634 MKQK 637 >gi|291515290|emb|CBK64500.1| ATP-dependent chaperone ClpB [Alistipes shahii WAL 8301] Length = 865 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 12/101 (11%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNS-----NSAQIGQAIA 63 + +D A + LE S E I +LD + R L + E IR ++ + +I + A Sbjct: 390 IDLVDEAASRLRLEMNSVPEEIDTLDRRVRQLEIEREAIRREKDKERVEHLTKEIEELKA 449 Query: 64 EGNLSLV-----DALKNETSTLKEQLPILEKEEHEVCSSLK 99 L + K+++ L+ E + Sbjct: 450 RDAEMRARWQGQRDLLKKIQANKDKIESLKVEAQQAERQGD 490 >gi|148666935|gb|EDK99351.1| mCG128490 [Mus musculus] Length = 1091 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Query: 14 LDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL--V 70 + L R + ++ + DE+ + L+++ E + ++ NS I + A+ + + Sbjct: 526 IKEELATRLNSSQTADLLKEKDEQIQGLMEEGEKLSKQQLHNSNIIKKLRAKDKDNENVI 585 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 L + L+E+L L + K+ I Sbjct: 586 AKLNRKAKELEEELQHLRQVLDGKEEVEKQHRENIK 621 >gi|145479739|ref|XP_001425892.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124392964|emb|CAK58494.1| unnamed protein product [Paramecium tetraurelia] Length = 1014 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 5 QWIRQNPEHLDIA--LKKR--HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + ++Q + + L + + E ++ + +++N+ L K+I + + N + +I Q Sbjct: 460 KALQQQKDLVKAQKELNDKHNNAEQLNKDLDEYEQENKELQKEINSLNDQINQLNKEINQ 519 Query: 61 AIAEGNL--SLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + + + L+ K+ ++E ++ + Sbjct: 520 KQKQIDQQAKDIQKLQENLEKQKQDNQSKQQENKQLQQNNND 561 >gi|119495102|ref|XP_001264344.1| nuclear segregation protein (Bfr1), putative [Neosartorya fischeri NRRL 181] gi|119412506|gb|EAW22447.1| nuclear segregation protein (Bfr1), putative [Neosartorya fischeri NRRL 181] Length = 510 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 16/149 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR-------------NSNS 55 +N E +D + + + S + +DE R + I +R +R N Sbjct: 118 KNVEDIDREIARLEKQVDSGTLRLVDE--RKALSDISTLRKQRKNFAGLDEQQKVINDLK 175 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 AQI + AL ++ + ++++L ++ E +L + E Sbjct: 176 AQIATLKKTLDNPEAKALSDKYTEIQKELDAIKAEHDSAFKNLNA-LRDERTKLHAEQQK 234 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEI 144 +A I + + E + I Sbjct: 235 KWTAIREIKDNYYKARKAYKEYEDEAWRI 263 >gi|119470086|ref|XP_001258015.1| hypothetical protein NFIA_054640 [Neosartorya fischeri NRRL 181] gi|119406167|gb|EAW16118.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] Length = 268 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 1/85 (1%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN-LSLVDALKNET 77 R LE + + + L+E+ R L K E++R +R +++I Q + + + +ET Sbjct: 182 AARFLEDEFDEMEQLEERIRRLKHKREELRQKRAKEASEIPQTEGSSSGKTQGEQQIDET 241 Query: 78 STLKEQLPILEKEEHEVCSSLKKLI 102 E+ + ++ Sbjct: 242 KQSDEEGNDDDDDDDVDDDDWDNWR 266 >gi|291407806|ref|XP_002720268.1| PREDICTED: angiomotin [Oryctolagus cuniculus] Length = 1091 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 500 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 559 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 560 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 613 >gi|223998516|ref|XP_002288931.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220976039|gb|EED94367.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 545 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 20/118 (16%) Query: 3 DIQWIRQNPEHLDIA------LKKRHLEPQSEYILSLDEKNRILI-------KKIEDIRA 49 D + + ++ E L A LK + + SL E+ + + K+I+ I+ Sbjct: 190 DEKKLIKDIEALQAAKRTAVELKSKQGDLD-----SLKEERKTVQADLTAKDKEIDTIQK 244 Query: 50 RRNSNSAQIGQAIAEGNLSL--VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 ++ S + + + VD L E +K Q+ KE+ + + ++ + Sbjct: 245 EIDAQSKVFKALMDKQSSERGTVDKLVEERDAIKIQMDEKFKEKTALRTQFREQTNDW 302 >gi|194228212|ref|XP_001488656.2| PREDICTED: angiomotin [Equus caballus] Length = 1089 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 502 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 561 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 562 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 615 >gi|154336513|ref|XP_001564492.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061527|emb|CAM38557.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 870 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 65/197 (32%), Gaps = 33/197 (16%) Query: 4 IQWIRQNPEHLDIAL------------KKRHLEPQSEYILSLDEKNRILIKKIEDIRARR 51 ++ I++N E L +L ++R+ + + D++ R L + E ++ R Sbjct: 86 MKLIQEN-EELRKSLTEAERHVRQMSIRERNSDHGA------DKRIRELQSECERMQKER 138 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 S + ++ +++ + L+++L E+ + E Sbjct: 139 LRESKE------------LENTRHQCADLRKRLDDNEETLKSAKELWDQERERYQQKIDE 186 Query: 112 EVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL 171 + A ++ + + E F + E + +R K + + Sbjct: 187 LLDFNKRAERPLVTPFARNRNGGVEEPLEQFLLKEEVAQ--LERKLKEAQHKSWEKEKEW 244 Query: 172 AHLERALGQFMIDLHTS 188 E L + +L + Sbjct: 245 VRTENELRHQISELQVN 261 >gi|118444423|ref|YP_877137.1| glycyl-tRNA synthetase [Clostridium novyi NT] gi|118134879|gb|ABK61923.1| glycyl-tRNA synthetase [Clostridium novyi NT] Length = 463 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 58/190 (30%), Gaps = 13/190 (6%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 + L ++ + + + + + R M+ T Q + T+ Sbjct: 122 WTNQELMNYIDENNIVCPKCGKKNYTDIRRFNLMFKTFQGVTEDSSA----EIYLRPETA 177 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + + K +P + SFR+E R +F + EL + Sbjct: 178 QGIFVNFKNAQRSSRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKP 233 Query: 293 EDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + + L L + + R +L F + T D+E + E Sbjct: 234 GTDLEWFHYWKNYCWKFLLDLGMTEDNLRFRDHGEEELSFYSNATSDIEFLFPF--GWGE 291 Query: 350 ISSCSTCGNF 359 + + ++ Sbjct: 292 LWGVADRTDY 301 >gi|109131953|ref|XP_001101620.1| PREDICTED: angiomotin [Macaca mulatta] Length = 1099 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 503 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 562 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 563 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 616 >gi|109081264|ref|XP_001093603.1| PREDICTED: GRINL1A complex locus protein 1 isoform 4 [Macaca mulatta] Length = 466 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIECMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|301609183|ref|XP_002934149.1| PREDICTED: RB1-inducible coiled-coil protein 1 [Xenopus (Silurana) tropicalis] Length = 1576 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 18/148 (12%) Query: 5 QWIRQNPEHLDIALKKRHLEPQS----------------EYILSLDEKNRILIKKIEDIR 48 + ++ + L LK R E E I+SL+ + +I+ +R Sbjct: 883 KQLKSDLAKLKEHLKNRDNEFALIRNENETFLCLQSEHNEKIISLENTMKEQACEIQQLR 942 Query: 49 ARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 R + I + AE L E + EQ + E E++ +++ S + Sbjct: 943 QYREAALEDIRKLHAE--NEEKLRLLKEDLMILEQTHLKELEDNLKLRHAQEMESLTSDH 1000 Query: 109 PLEEVPIGTSANENILIRSVGKKPSAIH 136 + + + + Sbjct: 1001 NHSQERVKQDHKRMVDQLVESYNTTIHE 1028 >gi|300123183|emb|CBK24456.2| unnamed protein product [Blastocystis hominis] Length = 889 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 46/159 (28%), Gaps = 7/159 (4%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIED--IRARRNSNSAQIGQAIAEGN 66 + +D A R L+ Q E I L + + L +IE + ++ S + + E Sbjct: 391 IDLVDEACANIRVQLDSQPEEIDRL--ERKQLQLEIEQTAMENEKDEASKARLEKVKEEL 448 Query: 67 LSLVDALKNE-TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + LK KE+ + E + + + + + Sbjct: 449 QEVREQLKPLMMRHEKEKEGMDELRRLKNKVAETQNKIEAAKRVHDTARASDLQYYVLPD 508 Query: 126 RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 K + ++ + D +S Sbjct: 509 LEEAIKRQEEEIEKQKDSRMLKEEVTANDICHVVSNWTG 547 >gi|114625184|ref|XP_001153428.1| PREDICTED: kinesin family member 27 isoform 2 [Pan troglodytes] Length = 1336 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 4 IQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ ++ + LK+R +++ LDE+ + L +++E + +R Sbjct: 827 LKLKAEDLDAC--NLKRRKCSFGSIDHLQKLDEQKKWLDEEVEKVLNQRQELEELEADLK 884 Query: 63 A-EGNLSLVDALKNETSTLKEQ 83 E +S +AL E S L+ + Sbjct: 885 KWEAIVSKKEALLQEKSHLENK 906 >gi|90408531|ref|ZP_01216688.1| TolA-like protein [Psychromonas sp. CNPT3] gi|90310350|gb|EAS38478.1| TolA-like protein [Psychromonas sp. CNPT3] Length = 323 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 39/108 (36%), Gaps = 4/108 (3%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 + ++++ R+ +K + +I + L+ + ++ E +KE+L Sbjct: 154 VAEVKRVEDEKRVAQEKRSAKLKEQ----KRIAKLKETQRLAKIKKIQKEARDIKERLRQ 209 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E ++ + L E S ++ + R+ +PS Sbjct: 210 AELDKAMEAEFVDAFSEAQNTQKLTETEKYKSLIKDKISRNWQIEPSM 257 >gi|172087480|ref|XP_001913282.1| hypothetical protein 005-11 [Oikopleura dioica] gi|42601410|gb|AAS21434.1| hypothetical protein 005-11 [Oikopleura dioica] Length = 1358 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 29/76 (38%), Gaps = 7/76 (9%) Query: 27 SEYILSLDEKNRILIKKIE------DIRARRNSN-SAQIGQAIAEGNLSLVDALKNETST 79 + LD + + + ++ E + A++ + QI + + + + E Sbjct: 163 LDEARKLDNEKKEVRRREEAAKVALEAEAKQKALREKQIAEEKRKRAIKDAERKAAEKRK 222 Query: 80 LKEQLPILEKEEHEVC 95 L+E+ +E ++ Sbjct: 223 LEEERKRQHRERAQLQ 238 >gi|332678561|gb|AEE87690.1| hypothetical protein FNFX1_1304 [Francisella cf. novicida Fx1] Length = 495 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 7/144 (4%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNS---AQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 I D K + IE + +RN+ S +I Q + + K E + +L I Sbjct: 105 IAKYDSKRDEIKATIESLIEKRNNVSGIAKKIRQLKYDHK---ISQKKTELKAINTKLDI 161 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 L+ E+ + ++ I+ I N G A N + + V A Sbjct: 162 LKDIENGDKAYTEEKITQI-NTIKNITVNGFKAYSNDIAKPVLAHLKAAWNYANKLNYMS 220 Query: 147 ALGLMDFDRATKLSGARFSVLTGH 170 +D +L+ + Sbjct: 221 YRNNIDIFWNARLALWNNQYYLNN 244 >gi|309364643|emb|CAP24971.2| CBR-PME-1 protein [Caenorhabditis briggsae AF16] Length = 2120 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 10/87 (11%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQI--GQAIAEG----NLSLVDALKNETSTL 80 S+ I SLD + + + +K+++ + S +I G+ EG + L ET L Sbjct: 1676 SDKIKSLDAQLKTIQEKLDEQQ----KFSQEIEEGKMKVEGVLSSTMEEKQKLLEETERL 1731 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPN 107 ++L E+ E S L ++ + N Sbjct: 1732 TKKLEEFEESRKETESGLAEINHQLAN 1758 >gi|301774883|ref|XP_002922870.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 1A-like [Ailuropoda melanoleuca] Length = 1641 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 717 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 774 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + V ++ Sbjct: 775 EDEQRNSAADTSVGEEEREDF 795 >gi|253681235|ref|ZP_04862033.1| glycine--tRNA ligase [Clostridium botulinum D str. 1873] gi|253562473|gb|EES91924.1| glycine--tRNA ligase [Clostridium botulinum D str. 1873] Length = 463 Score = 37.8 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 57/185 (30%), Gaps = 13/185 (7%) Query: 178 LGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLT 237 L ++ + + + + + R M+ T Q T++ T++ Sbjct: 127 LMNYIDENNIVCPKCGKKNYTDIRRFNLMFKTFQGVTED----TTSEIYLRPETAQGIFV 182 Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297 N + + K +P + SFR+E R +F + EL + Sbjct: 183 NFKNAQRTSRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKPGTDLE 238 Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLYREISSCS 354 + L L + + +L F + T D+E + E+ + Sbjct: 239 WFHYWKDYCWKFLLDLGMTEENLRFRDHGEEELSFYSNATSDIEFLFPF--GWGELWGIA 296 Query: 355 TCGNF 359 ++ Sbjct: 297 DRTDY 301 >gi|325103681|ref|YP_004273335.1| hypothetical protein Pedsa_0941 [Pedobacter saltans DSM 12145] gi|324972529|gb|ADY51513.1| hypothetical protein Pedsa_0941 [Pedobacter saltans DSM 12145] Length = 1174 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 54/174 (31%), Gaps = 5/174 (2%) Query: 9 QNPEHLDIALKKRHL-EPQSEYILSLDEKN---RILIKKIEDIRARRNSNSAQIGQAIAE 64 QN E + +++ + + LD K + K+ E++ + + + Sbjct: 378 QNLEKIAEDFQRKAAAKAKESGFKLLDTKKEQTKAETKEYENLLQKITDLDREYARKKMS 437 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 + + + AL+++ ++E++ ++ + I E+ + E + Sbjct: 438 SDQAELQALRDKFKKIEEEITRFNAKKKNKVKIDVGQLKPIQQKA-EDNLLYKQDTERLK 496 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 +K + G+ F K F L + A Sbjct: 497 KEIDLQKQVFADYEDYKTKFGKKAADERFKEDLKGFENYFQYLQDIKTKNDAAF 550 >gi|312867906|ref|ZP_07728110.1| proline--tRNA ligase [Streptococcus parasanguinis F0405] gi|311096310|gb|EFQ54550.1| proline--tRNA ligase [Streptococcus parasanguinis F0405] Length = 616 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 194 EVSAPLLVRDEAMYGTGQIPKFADDMF----CTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 E+ AP L+ + +G+ + +D++ L PT E + T + + K Sbjct: 68 EMLAPALLSADLWRESGRYDTYGEDLYKLKNREGSDFILGPTHEETFTAIVRDSVKSYKQ 127 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDS-FTEHERMLSCAEE 308 LPL + P +R E R G+LR +F + S DS ++ + E Sbjct: 128 LPLNLYQIQPKYRDEK----RPRNGLLRTREFIMKDGYSFHANYDSLDVTYDEYKAAYER 183 Query: 309 ILKRLDLHYRVVSLCTGDLGFSACKTY--------DLEVWL 341 I R L ++ + G +G + + DL+ W+ Sbjct: 184 IFTRSGLDFKAIIGDGGAMGGKDSQEFMAITPTRTDLDRWV 224 >gi|258644552|dbj|BAI39805.1| hypothetical protein [Oryza sativa Indica Group] Length = 792 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 32/104 (30%), Gaps = 15/104 (14%) Query: 5 QWIRQNPEHLDIALKKRH---------LEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 + +R + L+ + +E + + +N+ L ++E + Sbjct: 515 RTVRARLDGFRNRLRAKDDEIGRKSLEMEALANTLKEAKAENKRLQTELE----KEKEIR 570 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 A++ A L + E LK +L + + Sbjct: 571 AEVDHLKA--KLEKGKEARAEVDRLKAELKKEKAHSAALTDYYN 612 >gi|224047287|ref|XP_002194942.1| PREDICTED: similar to CDC42 binding protein kinase alpha (DMPK-like) [Taeniopygia guttata] Length = 1731 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 48/125 (38%), Gaps = 17/125 (13%) Query: 2 LDIQWIRQNPEHLDI---------------ALKKRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L + +R L+ S I + +++ R L ++ ED Sbjct: 487 LEIKSLKEEIEKLKKQVTESGQLEQQLEEASTARRELDDASRQIKAFEKQVRTLKQERED 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 + +S ++ E + E S + E+L L ++ ++ L+ Sbjct: 547 LNKELAESSDRLKSQAKELKDAHSQRKLAMQEFSEMNERLTDLHSQKQKLARQLRDKEEE 606 Query: 105 IPNVP 109 + V Sbjct: 607 MEVVM 611 >gi|311276815|ref|XP_003135368.1| PREDICTED: angiomotin-like [Sus scrofa] Length = 1088 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 505 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 564 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 565 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 618 >gi|167762587|ref|ZP_02434714.1| hypothetical protein BACSTE_00943 [Bacteroides stercoris ATCC 43183] gi|167699693|gb|EDS16272.1| hypothetical protein BACSTE_00943 [Bacteroides stercoris ATCC 43183] Length = 864 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 12/105 (11%) Query: 12 EHLDIA--LKKRHLE--PQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA----- 61 + + A L R++ + + L DE L +++ + + S +I Q Sbjct: 366 DAIIAAVELSNRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIERE 425 Query: 62 --IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISC 104 E + ++ + E + LKEQ + + + + K+ Sbjct: 426 AIKRENDRLKLEQIGKELAELKEQEKSYKAKWQNEKTLVNKIQQN 470 >gi|109067111|ref|XP_001094650.1| PREDICTED: nuclear factor erythroid 2-related factor 3 [Macaca mulatta] Length = 693 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L+ L K E ++ R + I Sbjct: 578 IRDIRRRGKNK-VAAQNCRKRKLDI----ILNLENDVCNLQAKKETLKRERTQCNKAINI 632 Query: 61 AIAE 64 + Sbjct: 633 MKQK 636 >gi|306836192|ref|ZP_07469176.1| helicase [Corynebacterium accolens ATCC 49726] gi|304567913|gb|EFM43494.1| helicase [Corynebacterium accolens ATCC 49726] Length = 997 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 17/104 (16%) Query: 7 IRQNPEHLDIALKKRH-------LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 I Q E L+ ++ R+ E IL LD + R +++IE +R Sbjct: 872 IEQQRESLEKEVQHRNSSYYNQQEELLESQILDLDTERRKAVREIE---KKRKDL----- 923 Query: 60 QAIAEGNLSLVDAL--KNETSTLKEQLPILEKEEHEVCSSLKKL 101 + A + ++ L K + L +++ +E + + +L+ Sbjct: 924 RRKATQADAPMEQLRFKKKARNLDDEIESIEDQYRKEKRNLRDN 967 >gi|270293791|ref|ZP_06199993.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275258|gb|EFA21118.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 841 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 67/214 (31%), Gaps = 19/214 (8%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL----------KNETS 78 + LD R K+ ++++ ++ + I + + V+ K E Sbjct: 530 DLSELDAMQREADNKVYALQSQISALEKENESLIKQIANASVEDAIPLRQKYNENKAEID 589 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 LK +L ++++ E+ + ++ V + I + ++ + + Sbjct: 590 RLKPELATWQQKQAEIVQAKEEAKGDNDVVTDDYYRIPAIMQDCKTAYNITWQDNGFWSG 649 Query: 139 REHFE---IGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 I G++ F K++ + RA+ Q DL T Y++ Sbjct: 650 YTFIRKGTIPNINGIITFRATLKIARKPKYF---LGIKIHRAILQISWDLTT---EYSDT 703 Query: 196 SAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLI 229 ++ + K +D + Sbjct: 704 HVVEVITLDPGMSEKDKTKLVNDRIAEIAKEYPK 737 >gi|224023942|ref|ZP_03642308.1| hypothetical protein BACCOPRO_00659 [Bacteroides coprophilus DSM 18228] gi|224017164|gb|EEF75176.1| hypothetical protein BACCOPRO_00659 [Bacteroides coprophilus DSM 18228] Length = 169 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 14/87 (16%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE-YILSLDEKNRILIKKIE-------DIRARRNSNSA 56 + + +NP+ + + ++ L+ + ILS+D I I+ ++ + + Sbjct: 28 KSVLENPDSISKLVLRKGLDAGTAFEILSID------IADIDIGRNIGAALQMDQANADK 81 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQ 83 I QA AE ++ AL+ E E+ Sbjct: 82 NIAQAKAEERRAMAVALEQEMKAKAEE 108 >gi|221101989|ref|XP_002169988.1| PREDICTED: hypothetical protein, partial [Hydra magnipapillata] Length = 264 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 10/97 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIE--------DIRARRNSNSAQIGQAIA 63 + LK R+LE I +D++ L K + ++ + + S I + Sbjct: 151 DASIEKLKNRNLEIDV-EIKRIDKEVSQLQMKKDADSGNLLKELEKKLDEVSK-IEVKAS 208 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 D+L +E +K+ + +E+ Sbjct: 209 SDVKHAKDSLNSEVKKVKQNEKSISEEQKYSIMPNFN 245 >gi|194034734|ref|XP_001927765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Sus scrofa] Length = 1117 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 9/168 (5%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR-ARRNSNSAQIGQA 61 +I+ + E L +LK R+ E + L+EK+R ++ E ++ +R + G Sbjct: 94 NIKKAIEEAERLSESLKLRYEEAEVRK--KLEEKDR---QEKEQLQRQKRQEAGIEDGGT 148 Query: 62 IAEGNLSLVDALKNETSTL---KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 A+ +L V K++T + K + ++ L ++ + Sbjct: 149 SAKSSLESVLDSKDKTRKINGEKSEKNETTEKGAITAKELYTMMMDKNISLIIMDARRMQ 208 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I + P EA D K G+ V Sbjct: 209 DYQDSHILNCLSVPEEAISPGVTASWIEANLPDDSKDTWKKRGSVDYV 256 >gi|158702352|gb|ABW77540.1| coiled-coil transcriptional coactivator b [Salmo salar] Length = 580 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 44/118 (37%), Gaps = 9/118 (7%) Query: 32 SLDEKN-----RILIKKIEDIRARRNSNSA---QIGQAIAEGNLSLVDALKNETSTLKEQ 83 LD++ R + +K + ++ R ++G+ + N L+ + E LK + Sbjct: 376 ELDKERVQKLNREVQRKEQWLQEERMERQKLEVELGKEK-DCNRVLLSDARREVQELKAR 434 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + + +KE + + I V + L+ + + + ++ ++ Sbjct: 435 MRMNQKEREQQKMERQARIRLFAVYVSISVLVLPCNGCCDLLDYMHQLEQRLEVATDN 492 >gi|123439887|ref|XP_001310710.1| hypothetical protein [Trichomonas vaginalis G3] gi|121892491|gb|EAX97780.1| hypothetical protein TVAG_235920 [Trichomonas vaginalis G3] Length = 3382 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 71/322 (22%), Gaps = 35/322 (10%) Query: 37 NRILIKKIEDIRARRNSNSAQIG--QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 +I S +IG QA E + +D LK E L E+L + E ++ Sbjct: 2455 WLKIIVNYYKWNTEIGDLSLEIGEIQAKRESTMQQIDELKKENEDLNEKLKMKENKDSCP 2514 Query: 95 CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFD 154 L + V + G Sbjct: 2515 TWLLSAYNNDASEVYKMLETTEQLMKDISKFGEFLNDTEHSLKQYSFVITAFEYGFGAIK 2574 Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214 R ++ L G E ++ Y + P L + + + Sbjct: 2575 REERMKIYEQLNLNGLQNPFELIKQPLDFEIIYPIISYIHLFTPSLCDTQMLENSLSYKT 2634 Query: 215 ------------------FADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTT 256 F + + P Y I ++S+ Sbjct: 2635 SIPFSTTAIFDILFCLRIFPSKNNFIDENNYPKPNYPSPRKIYYDPLDIMTQSIISTHNK 2694 Query: 257 LAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 + F S CE+ + ++S + + Sbjct: 2695 VQSCFTSSLE---------------NCCEMYAKCMSDNSPLIVFLDDRKSSTDFFVFIDY 2739 Query: 317 YRVVSLCTGDLGFSACKTYDLE 338 ++ C G F E Sbjct: 2740 LQLQIDCNGRFTFQDQILKSCE 2761 >gi|118099903|ref|XP_420098.2| PREDICTED: similar to sperm associated antigen 9 [Gallus gallus] Length = 1287 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 12/111 (10%), Positives = 39/111 (35%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++ E + +++ + L ++E + ++ Sbjct: 56 LELLRDDNEQLLTQYEREKALRKQAEEKFIEFEDSQEQEKKDLQTRVEALESQTRQL--- 112 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L E+ + + + Sbjct: 113 --ELKAKNYADQISRLEEREAELKKEYNALHSRHTEMIHNYMEHLERTKLH 161 >gi|34015183|gb|AAQ56378.1| hypothetical protein OSJNBa0003M24.22 [Oryza sativa Japonica Group] gi|34015208|gb|AAQ56402.1| hypothetical protein OSJNBa0038J12.3 [Oryza sativa Japonica Group] Length = 771 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 32/104 (30%), Gaps = 15/104 (14%) Query: 5 QWIRQNPEHLDIALKKRH---------LEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 + +R + L+ + +E + + +N+ L ++E + Sbjct: 494 RTVRARLDGFRNRLRAKDDEIGRKSLEMEALANTLKEAKAENKRLQTELE----KEKEIR 549 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 A++ A L + E LK +L + + Sbjct: 550 AEVDHLKA--KLEKGKEARAEVDRLKAELKKEKAHSAALTDYYN 591 >gi|14330788|emb|CAC40983.1| putative movement protein [Soil-borne wheat mosaic virus] Length = 326 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 17/93 (18%) Query: 1 ML--DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR----ARRNSN 54 ML I +++N E +L L E+ R KK+E +R A+R + Sbjct: 231 MLPNSINILKENVPLFKK-----------ESVLDLTEQEREKQKKLETLRSVNEAQRRKS 279 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + ++ + + + V K + S + E Sbjct: 280 AQEMQKRNDDLIKANVQKQKAKQSEIDENRKNH 312 >gi|118350688|ref|XP_001008623.1| SMC family, C-terminal domain containing protein [Tetrahymena thermophila] gi|89290390|gb|EAR88378.1| SMC family, C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1238 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 34/110 (30%), Gaps = 21/110 (19%) Query: 5 QWIRQNPEHLDIALKK--------------RHLEPQSEYILSLDEKNRILIKKIEDIRAR 50 + R E L+ R ++ E + + ++++ +K+E++ Sbjct: 764 KKFR--FEKFAEQLRNLSGRGIQEQQDKLEREIQDDIEMLARVQDQDKKTQEKLEELNNE 821 Query: 51 RNSNS-----AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 R + S ++ + + ++ E L + E Sbjct: 822 RANLSKSKDTKEVWKKKIQKLKQEIEESDKELQNLNNHIADCEVNIEHNK 871 >gi|225870602|ref|YP_002746549.1| membrane protein [Streptococcus equi subsp. equi 4047] gi|213033065|emb|CAP20348.1| putative membrane protein [Streptococcus equi subsp. equi] gi|225700006|emb|CAW94007.1| putative membrane protein [Streptococcus equi subsp. equi 4047] Length = 487 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 19/86 (22%) Query: 24 EPQSEYILSLDEKNRILIKKIEDI--------------RARRNSNSAQI-----GQAIAE 64 E + I ++++ + L K++ + + + A+I + Sbjct: 157 ELSKDDISKMEKEAKELQDKLDKLNGEIRDKDKLSDKQKEKIKDLEAEIESLKEKMKKDK 216 Query: 65 GNLSLVDALKNETSTLKEQLPILEKE 90 GN L + +K E L E++ LEK+ Sbjct: 217 GNKDLSEDMKKEIDKLTEKVKELEKK 242 >gi|314934187|ref|ZP_07841548.1| peptide chain release factor 1 [Staphylococcus caprae C87] gi|313653092|gb|EFS16853.1| peptide chain release factor 1 [Staphylococcus caprae C87] Length = 358 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 9/97 (9%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 + + +P+ ++ + K R + + E R K E++ I + + Sbjct: 15 LNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELE--------DIEEMLK 66 Query: 64 E-GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 E + VD LK E+++LK +LP +E+E + Sbjct: 67 ETSDKEEVDMLKEESASLKAELPEMEEELKILLIPKD 103 >gi|296109493|ref|YP_003616442.1| SMC domain protein [Methanocaldococcus infernus ME] gi|295434307|gb|ADG13478.1| SMC domain protein [Methanocaldococcus infernus ME] Length = 873 Score = 37.8 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 7/79 (8%) Query: 16 IALKKRHLEPQ------SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA-EGNLS 68 L+ + LE + E L+ + +IK +++++ + S + + E L Sbjct: 657 KNLENKFLELEREYSRKDEEFKQLNSQLEEIIKDLDNLKRDLDEISKYREEIKSLEKALE 716 Query: 69 LVDALKNETSTLKEQLPIL 87 V+ L+ + K +L Sbjct: 717 FVEELRKKVKEFKNKLKCH 735 >gi|327262365|ref|XP_003215995.1| PREDICTED: zinc finger protein 318-like [Anolis carolinensis] Length = 1801 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 26/229 (11%), Positives = 67/229 (29%), Gaps = 10/229 (4%) Query: 11 PEHLDIALKK-RHLEPQSEYILSLDEKNRI----LIKKIEDIRARRNSNSAQIGQAIAEG 65 + + L R+ Q + ++ EK + KK+ +R N S Q G+ + + Sbjct: 872 FKTVKERLSDERNRASQKQKVIEEREKLKAEQDARQKKLHYLRTELNRLSKQQGEMLRKK 931 Query: 66 NLSL---VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE-EVPIGTSANE 121 D L E + L+E + + + + +K S + V + I + + Sbjct: 932 RREKDGHKDPLLVEVNRLQENIMMEIDQLKMNADAAEKKQSELDKVAQILGINISEKSRK 991 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + ++ ++ S + + + Sbjct: 992 LSSENKDLSEKNKSENAKNQERTSGSIKESKTSHEKPQSKSPKPTDSSSQPSKQHLQATS 1051 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP 230 + D + + + + + + + T K + W Sbjct: 1052 IYDYYDTGNHWCK-DCNTICGTMFDFFTHMHNKKHRQTLDPYNRPWASK 1099 >gi|326929684|ref|XP_003210987.1| PREDICTED: CAP-Gly domain-containing linker protein 1-like [Meleagris gallopavo] Length = 1286 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 29/82 (35%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 +L +E + KK +++ + Q QA A+ V + + K+ + + Sbjct: 887 NLLDAEEALKTAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEK 946 Query: 89 KEEHEVCSSLKKLISCIPNVPL 110 E + ++ + N Sbjct: 947 IETLASLENSRQTNEKLQNELD 968 >gi|307704937|ref|ZP_07641828.1| chromosome segregation protein SMC [Streptococcus mitis SK597] gi|307621551|gb|EFO00597.1| chromosome segregation protein SMC [Streptococcus mitis SK597] Length = 1179 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + ++ + + Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLQKLKEQLAT-- 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A ++ K + L + KE+ E +S + S + + Sbjct: 430 AKEKASQQKEELETAKEQVQKLLADYQAIAKEQEEQKASYQAQQSQLFDRLD 481 >gi|296109172|ref|YP_003616121.1| hypothetical protein Metin_0487 [Methanocaldococcus infernus ME] gi|295433986|gb|ADG13157.1| conserved hypothetical protein [Methanocaldococcus infernus ME] Length = 206 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 50/150 (33%), Gaps = 3/150 (2%) Query: 16 IALKKRHLEPQSEY--ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 +K + + E I L+ + L K++ ++ S + + EG + Sbjct: 5 ERIKNKFQKNPIEKLTIRDLEGEKIRLKSKLDRVKKEIKSLDKKKKELFKEGIGADTLTK 64 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 K +K + + K +++ + +K + + N+ + + N + + + P Sbjct: 65 KMLAQEIKS-IEMEMKLKYKTFITYQKQFTFVNNLLIVKKYEKELKNIGMWNKIINIPPE 123 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGAR 163 + + + K+ R Sbjct: 124 MLEKKLSDIILDSKEFDSVVEGLNKVFEMR 153 >gi|225850357|ref|YP_002730591.1| multidrug-efflux transporter, MFS family [Persephonella marina EX-H1] gi|225646380|gb|ACO04566.1| multidrug-efflux transporter, MFS family [Persephonella marina EX-H1] Length = 375 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Query: 3 DIQWIRQNPEHLDIALK-KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 DI R + L R LE + L + ++ K+E ++ R+ ++ QA Sbjct: 151 DINRFRN---LVKKDLAPARKLEKMETELKILKVERESVVSKLEQMKISRDITEKKVKQA 207 Query: 62 -----IAEGNLSLVDALKNETSTLKEQLPILEK 89 + +++ + + LK+Q ++ Sbjct: 208 ESDILKVRELKKEISSIEEKMNALKKQKEDIQN 240 >gi|225849633|ref|YP_002729867.1| phosphodiesterase [Persephonella marina EX-H1] gi|225645450|gb|ACO03636.1| conserved hypothetical protein [Persephonella marina EX-H1] Length = 553 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNR--ILIKKIEDIRARRN-SNSAQIGQAIA 63 I +N E + +R E + + K + ++++ E ++ ++ +I + Sbjct: 40 IIKNKEEI-EREARRKAEEIIKEF-EAEAKRKAEEIVREAESLKQQQEIIIEKEILKRKQ 97 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKE 90 E L + E L++ L E + Sbjct: 98 ELEKELKSE-REELQNLEKTLMSREAQ 123 Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 14/108 (12%) Query: 16 IALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQ-------IGQAIAEGN 66 L+ R E + I L+E+ R + K+IE+ A+ + Q I E Sbjct: 129 ARLEHREEELDKKWDEIKKLEEEIRSIQKEIEEKEAKLKAAEEQYMLELQRIASMTKEEA 188 Query: 67 LSLV-----DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + + K E + L +++ ++E E + + + P Sbjct: 189 REELLRKVEEEAKLEAAKLMKEIEEEARKEAEKEAKWNLVTAIQRLAP 236 >gi|238604942|ref|XP_002396331.1| hypothetical protein MPER_03462 [Moniliophthora perniciosa FA553] gi|215468683|gb|EEB97261.1| hypothetical protein MPER_03462 [Moniliophthora perniciosa FA553] Length = 253 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 7/112 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 I E+ AL K E ++ ++ R LI+++E +G++ A Sbjct: 120 IENELENAKEALMKAEKEWDNDKTKKKRDEWRRLIRELEIKEHELRLTEQSLGESSASKL 179 Query: 67 LSLVDALKNETSTLK-------EQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + VD LK L E+ + E ++ +++ + E Sbjct: 180 AAQVDELKQAIVELTTTVAAAQERQKNADAEIKQLKRDMEEYKNNKEGKIDE 231 >gi|187607171|ref|NP_001120598.1| cingulin [Xenopus (Silurana) tropicalis] gi|229553906|sp|B1WB65|CING_XENTR RecName: Full=Cingulin gi|171846400|gb|AAI61633.1| LOC100145755 protein [Xenopus (Silurana) tropicalis] Length = 1251 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 14/98 (14%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--Q 60 D+Q +R+N E++ LSL+ + + + + + +++ +S +I + Sbjct: 501 DVQQLRKNMENVSQDQ------------LSLETERQKINQVVRNLQRELEESSDEINQWK 548 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 + + N + + K E +K + E E E Sbjct: 549 EMFQKNKEELRSTKQELLQMKMEKEESEDELKETKDRF 586 >gi|332981926|ref|YP_004463367.1| hypothetical protein Mahau_1351 [Mahella australiensis 50-1 BON] gi|332699604|gb|AEE96545.1| hypothetical protein Mahau_1351 [Mahella australiensis 50-1 BON] Length = 167 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 8/120 (6%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQS----EYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 D+ ++ + + L+ E + L E L + ++ + R++ I Sbjct: 31 DVNGLKADVSGFKADIN--GLKTDVRGLKEDVKDLQEDVTGLKQDVKALNQRQDEMQKDI 88 Query: 59 GQAIAE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 + G + LK+E + LKE + S + + + ++ + I Sbjct: 89 AGLKQDVNGLKEGFNGLKDEVAALKECQDETYMIARALEESNEFKRAEMDSMVHDIARIK 148 >gi|325119395|emb|CBZ54948.1| Smc ABC ATpase, related [Neospora caninum Liverpool] Length = 1982 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 2/89 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ--AIAEGNLSLVDALKNETS 78 R +E + E I +L+++ + L KK +++A R ++ E + A + E + Sbjct: 1727 RRVEEKEEEIAALEQRQKQLEKKRRNLQAAREEGEKRLAAQTQAREEKENQAKAARKEAA 1786 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPN 107 L+ +L I++ + E + + +S + Sbjct: 1787 DLQVRLEIVDDKLKEAQLAYEMKVSQMRG 1815 >gi|269963890|ref|ZP_06178202.1| hypothetical protein VME_45860 [Vibrio harveyi 1DA3] gi|269831377|gb|EEZ85524.1| hypothetical protein VME_45860 [Vibrio harveyi 1DA3] Length = 299 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 5/164 (3%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA-RRNSNSAQI--GQA 61 + I + E + +K+R + E I L + + K E+++ RN+NS I Sbjct: 50 KEILRKSEEITSLIKQR--DLSVEEIQKLKNFIKQMEKAAEEVQKISRNTNSENIRLNNE 107 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + E LK + LKE + + + H + K + + + + N Sbjct: 108 LKELRALNPKKLKEQVRRLKESIKKYDAKIHGQHHDIAKERRKVLHAEQQYTEVADKYNN 167 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 + + + + E+ + G F + Sbjct: 168 AVETMRRMHEMMKLEGALCEREMQDENGNWFFIYRKPTTQDTRY 211 >gi|237740463|ref|ZP_04570944.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229422480|gb|EEO37527.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 491 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 + + K +E + + L+ + + ++++ + +N + Q +G+ S ++ L Sbjct: 155 IKESQDK--IEAEKIKLDKLENQLKENARRMDAKKEEQNKL-KEKLQVEKKGHQSSIEKL 211 Query: 74 KNETSTLKEQLPILEKEE 91 K E + +++ + E Sbjct: 212 KKEKQRISKEIERIIIEN 229 >gi|168209624|ref|ZP_02635249.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] gi|170712214|gb|EDT24396.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] Length = 327 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 8/105 (7%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 N E + K E I L +K R +IE ++ + + IG+ E Sbjct: 93 NEFLNNIEEVSTKSK--------ENIYHLKDKARETYDEIERLKEQVEGINKNIGELSEE 144 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + + AL+ S L E++ E ++++ + Sbjct: 145 EGIENIAALQRIGSELSEKIRTSNHIAKEHIEKIEEMDKMLKGEC 189 >gi|149758455|ref|XP_001488860.1| PREDICTED: kinesin family member 27 [Equus caballus] Length = 1405 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 4 IQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ ++ + L +K+R + + LDE+ + L +++E + +R Sbjct: 897 LKLKAEDLDALK--MKRRKGSFGSIDQLQKLDEQKKWLDEEVEKVLNQRQELEELKEDLK 954 Query: 63 AEGNL-SLVDALKNETSTLKEQ 83 + S +AL E S L+ + Sbjct: 955 KREAIVSKKEALLQEKSHLENK 976 >gi|145551530|ref|XP_001461442.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124429276|emb|CAK94069.1| unnamed protein product [Paramecium tetraurelia] Length = 664 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 3/160 (1%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ---L 84 + I SL + L ++I+ I+ +N ++ E L D L E +KE+ Sbjct: 202 DEIQSLKQDRDKLNQEIQQIKNEKNKLQDELDIEKRERTRLLQDKLDLEKQFIKEKDYLK 261 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI 144 E+E+ + + K I E+ + A + + + + + Sbjct: 262 SEFEREKQRILDTAKLENELIKQQLGEQKQLDNLAEKINVSAKELELLKNQLYQKHEQQT 321 Query: 145 GEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMID 184 E + +D + E+ Q + D Sbjct: 322 QEKIKQLDTKKLEIQDKESQLEKEKSYLENEKRRLQNLQD 361 >gi|289524446|ref|ZP_06441300.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502315|gb|EFD23479.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 152 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 15/82 (18%) Query: 5 QWIRQNPEHLDIALKKRHLEPQS----EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + + +N + K R +E + + L+ R L +++E+++ R++ QI + Sbjct: 48 KDLAENLD------KLRQVEEEVARLNDKARELEVDKRKLSEELEEMKKERDNLEGQIAE 101 Query: 61 AIAEGNLSLVDALKNETSTLKE 82 A+ L+ +KE Sbjct: 102 LKAQ-----AAELRENLERVKE 118 >gi|167037692|ref|YP_001665270.1| chromosome segregation protein SMC [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116107|ref|YP_004186266.1| chromosome segregation protein SMC [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856526|gb|ABY94934.1| chromosome segregation protein SMC [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929198|gb|ADV79883.1| chromosome segregation protein SMC [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 1196 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 35/110 (31%), Gaps = 11/110 (10%) Query: 2 LDIQWIRQNPEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ RQ + + K+++++ ++L + L +I ++ I Sbjct: 837 HNLKDKRQEFDREKNNIVEKEKNIKEIESLKVNLSLEREKLQGEIYKLQQEVEKIQKDIS 896 Query: 60 QAIA---------EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + L+ E + + E+ +E E + Sbjct: 897 SLEDNIFQEEEDLQKRKEKFSILQQEFTNINEEFHKVEMEMQRFQIEIDN 946 Score = 36.7 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 43/102 (42%), Gaps = 2/102 (1%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTL 80 L+P+ + I E+ L K+I+ ++ ++ +IGQ I + ++ L E S + Sbjct: 671 LKPKLQSIFKRKEEITKLKKEIDSLKNQQEIVGEEIGQKINDKIHVEEQIELLNKEISDI 730 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + ++ + + L++ + N LE + + Sbjct: 731 SYNITSNDQRRISLEKEIGNLLNQLENYTLEIDELKENVRNY 772 >gi|149183378|ref|ZP_01861814.1| hypothetical protein BSG1_08651 [Bacillus sp. SG-1] gi|148848921|gb|EDL63135.1| hypothetical protein BSG1_08651 [Bacillus sp. SG-1] Length = 520 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 10/113 (8%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED-IRARRNSNSAQIGQAIAEG 65 I ++ + ALKK E +L ++N L +E+ +R RRN Q + + + Sbjct: 43 ILEDAKREAEALKK-------EKLLEAKDENHKLRTDMENDLRERRNELQKQENRLMQKE 95 Query: 66 N--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 ++L S L+ + L + + + K+ I E I Sbjct: 96 ENLDRKDESLDKRESQLERKEAALNERQQHIEEMESKVDEMIRLQQTELERIS 148 >gi|199765|gb|AAA39728.1| moesin [Mus musculus] Length = 566 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 13/113 (11%), Positives = 34/113 (30%), Gaps = 2/113 (1%) Query: 31 LSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 L L+++ + + E + R + + + + L +E + L ++ LE Sbjct: 362 LELEQERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLASEMAELTARISQLE 421 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + S + V + + V + H ++ Sbjct: 422 MARKKKESEAVEWQQKAQMVQEDLEKTRAELKTAMSTPHVAEPAENEHDEQDE 474 >gi|42520333|ref|NP_966248.1| hypothetical protein WD0462 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410071|gb|AAS14182.1| hypothetical protein WD_0462 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 440 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 6/112 (5%) Query: 18 LKKRHLEPQSEYILS----LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVD 71 L+ + L + E + L EK L +K+E + +N S ++ + E + +D Sbjct: 206 LENKGLNDRIETLREVQKALREKKHELSEKVEALNKEKNKLSKEVEELREEQERLHANLD 265 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 L+ + + ++ L KE E L + I N E I N + Sbjct: 266 KLQCKIKEVNKEKKNLSKELKEKFEELDEANGLIKNQSFELDGIRKDCNNEV 317 >gi|33578097|gb|AAQ22369.1| chromosomal segregation protein [Methanococcus voltae PS] Length = 1199 Score = 37.8 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 10/104 (9%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + + + + + + + ++LIK+IE + R + ++ E + S Sbjct: 357 NDLNETKEKINN----IRIDTLKK-EAEAKVLIKEIEKLNEERQNLEKKV-----EQSES 406 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 V ALKN+ S L E++ +KE + + + L +L + + N + Sbjct: 407 QVKALKNQESKLSERINDTQKELYGLKNELNQLENTLNNRTFDY 450 >gi|308472489|ref|XP_003098472.1| CRE-TAG-241 protein [Caenorhabditis remanei] gi|308268932|gb|EFP12885.1| CRE-TAG-241 protein [Caenorhabditis remanei] Length = 1654 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 47/125 (37%), Gaps = 10/125 (8%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILI----KKIEDIRARRNSNSAQIGQ 60 + ++ + L +++ +E + + + K + L + E + RN S Sbjct: 846 KRLKSETDLLKKDMQE--METDKKTVKEFEIKYKKLESIFETEREKMNGERNR-SKNELA 902 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ + + LK T K+ + E+ ++ K+++ +P E +++ Sbjct: 903 AMKKMKDDAEEQLKKLTEDQKKNEASWKSEKTKLE---KEIVMLKKQLPDEHEMKESTST 959 Query: 121 ENILI 125 N Sbjct: 960 PNNSF 964 >gi|217077222|ref|YP_002334940.1| chromosome segregation SMC protein, putative [Thermosipho africanus TCF52B] gi|217037077|gb|ACJ75599.1| chromosome segregation SMC protein, putative [Thermosipho africanus TCF52B] Length = 1155 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 50/119 (42%), Gaps = 4/119 (3%) Query: 8 RQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI--A 63 + + ++ L K E +S E I+ L E+ +++ +++E R + +I + + Sbjct: 376 KNEYDEIEKNLNKLENEKKSLTESIIDLTERLKMVEEQLETKLERSKELNEEISELSQNS 435 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 E L E LK+++ + + + +L+K++ + E I NE Sbjct: 436 EKYDKKTKELLEEIEQLKQEMQSIAGQREFLKENLEKIVHRKKEIQSEIFVIQKQLNEY 494 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI--AEGNLSLVDALKNETSTLKEQLP 85 + I S++E + L +++ +++ + + + + + ++ + L+E+ Sbjct: 845 DEIDSIEENIKELEQELNTLKSETEALFKSMNEDKSGKNDKVKELKEIEEKMEKLREETE 904 Query: 86 ILEKEEHEVCSSLKKLISCIPN 107 + ++ H + ++ I N Sbjct: 905 KIREKMHSLELEIQAKKMKIEN 926 >gi|163816527|ref|ZP_02207891.1| hypothetical protein COPEUT_02717 [Coprococcus eutactus ATCC 27759] gi|158448227|gb|EDP25222.1| hypothetical protein COPEUT_02717 [Coprococcus eutactus ATCC 27759] Length = 471 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 181 TAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 236 Query: 291 REEDSFTEHERMLSCAEEILKRL---DLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + E S LK L D R +L F + T D+E + Sbjct: 237 KPGTDMEWFEYWRSFCINWLKDLGIKDDEMRARDHSHEELCFYSKGTTDIEYLFPF--GW 294 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 295 GELWGIADRTDY 306 >gi|123475700|ref|XP_001321026.1| viral A-type inclusion protein [Trichomonas vaginalis G3] gi|121903844|gb|EAY08803.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3] Length = 1478 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 43/94 (45%), Gaps = 10/94 (10%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILS----LDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ N E +K + + + + + +D+K R + K+ E ++ N S I ++ Sbjct: 710 LQNNFE--KDKMK---FQNEIDKLENMNHNIDDKVRSIQKENEKLKIENNELSNTI-KSE 763 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCS 96 + N + L +E + LK++L +KE + Sbjct: 764 RDENHTRKSKLNDEINQLKQKLIDQKKESENQLN 797 >gi|108757609|ref|YP_634714.1| hypothetical protein MXAN_6594 [Myxococcus xanthus DK 1622] gi|108461489|gb|ABF86674.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 1047 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 1/76 (1%) Query: 33 LDEKNRILIKK-IEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 LD + +++ + R + I Q + + + A+ + LK ++ L + Sbjct: 578 LDRQKLEALQEMARQLSNERRELANLIEQYKSNPDEAARQAVMEQIQQLKSRIQELMQRM 637 Query: 92 HEVCSSLKKLISCIPN 107 E+ ++ Sbjct: 638 AEMRKGIRDEHLNAEA 653 >gi|76779789|gb|AAI06049.1| SPAG9 protein [Homo sapiens] Length = 484 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|242242837|ref|ZP_04797282.1| glycyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242233738|gb|EES36050.1| glycyl-tRNA synthetase [Staphylococcus epidermidis W23144] Length = 463 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 9/135 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A E L L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASEWLTDLNISEDNMRLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNFQSR 362 E+ ++ +F R Sbjct: 289 GELWGIASRTDFDLR 303 >gi|254976977|ref|ZP_05273449.1| putative cell surface protein [Clostridium difficile QCD-66c26] gi|255651895|ref|ZP_05398797.1| putative cell surface protein [Clostridium difficile QCD-37x79] gi|260687148|ref|YP_003218282.1| putative cell surface protein [Clostridium difficile R20291] gi|260213165|emb|CBE04615.1| putative cell surface protein [Clostridium difficile R20291] Length = 513 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + I ++++ + L K++ + +++ + + L++E +LKE+ Sbjct: 147 ELSKDDISKIEKEAKELQDKLDKLNCELKDKDK-----LSDKQKNKIKDLEDEIDSLKEK 201 Query: 84 LPILEKEEHEVCSSLKK 100 + + + K+ Sbjct: 202 MKKDKGNKDLSEDMKKE 218 >gi|225026534|ref|ZP_03715726.1| hypothetical protein EUBHAL_00783 [Eubacterium hallii DSM 3353] gi|224956148|gb|EEG37357.1| hypothetical protein EUBHAL_00783 [Eubacterium hallii DSM 3353] Length = 443 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 10/117 (8%) Query: 3 DIQWIRQNPE-HLDIA-LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 DI+ +R++ E + L +++ E + + +L E+ L I+ + I + Sbjct: 256 DIKNLREDKEQAIQEKELAEKYAEETQKELENLAEQRAQLQPIIDKVSKELKECRKLIPE 315 Query: 61 AIAEG--------NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 G + L N+ + L +E + K+ + Sbjct: 316 LPEAGALERASTYRDKKITPLFNQMKGIIAGLAAQVQELNTEIEKWKEKYKREKQIC 372 >gi|171695460|ref|XP_001912654.1| hypothetical protein [Podospora anserina S mat+] gi|170947972|emb|CAP60136.1| unnamed protein product [Podospora anserina S mat+] Length = 803 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I LD+K + ++E +R ++ S + E + + ++E L E+ Sbjct: 330 DDIQRLDQKIMTIQIELESLRKEKDIASKE----RREKLEADLKTYEDEVKVLTEKWEKE 385 Query: 88 EKEEHEVCS 96 + E + Sbjct: 386 KAELDAIKQ 394 >gi|149019058|gb|EDL77699.1| rCG25966, isoform CRA_a [Rattus norvegicus] Length = 1212 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 15/79 (18%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVD 71 S+ I L+E N+ L K E+++ R + ++ EG + Sbjct: 338 SQRIEELEETNKSLQKAEEELQELREKIAKGECGNSSLMAEVESLRKRVLEMEGKDEEIT 397 Query: 72 ALKNETSTLKEQLPILEKE 90 + + LK++L E Sbjct: 398 KTEAQCRELKKKLQEEEHH 416 >gi|113676998|ref|NP_001038590.1| serine/threonine-protein kinase MRCK beta [Danio rerio] gi|55251137|emb|CAH69154.1| novel protein similar to vertebrate CDC42 binding protein kinase beta (DMPK-like) (CDC42BPB) [Danio rerio] gi|190337634|gb|AAI63554.1| CDC42 binding protein kinase beta (DMPK-like) [Danio rerio] Length = 1708 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 12/104 (11%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ + + + L L S+ + E+ L + E + + Q+ Sbjct: 483 IKKLNEEIDRLKKKLA------DSDRLEHQLEEAVTLRQDFESSSTKLKALDKQVKALKL 536 Query: 64 EGNL------SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 E +D LK++T LK+ + E +++ Sbjct: 537 EKEDIHKQLVESLDRLKSQTKELKDAHQQRKLAMQEFSEVNERM 580 >gi|325090029|gb|EGC43339.1| conserved hypothetical protein [Ajellomyces capsulatus H88] Length = 772 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 7/73 (9%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I LD + + ++E +R + S + L + LK + + +KE + Sbjct: 311 DAIQELDRQIMTIQIELESLRKETDITSKE-------RREKLEELLKTKQNKVKELTAVW 363 Query: 88 EKEEHEVCSSLKK 100 EKE+ E+ + + Sbjct: 364 EKEKAELDTIKQA 376 >gi|312091207|ref|XP_003146898.1| hypothetical protein LOAG_11329 [Loa loa] gi|307757937|gb|EFO17171.1| hypothetical protein LOAG_11329 [Loa loa] Length = 574 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 56/375 (14%), Positives = 113/375 (30%), Gaps = 26/375 (6%) Query: 49 ARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 A++ + + + T+ + +P E + K + Sbjct: 1 QETKDAIAELLRLKKQYKDEFGEEYTASTTNVNASVPKEVVESRKDEGKKTKKEEVESKM 60 Query: 109 PLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLT 168 + V + + + L V K+ + + + + D + Sbjct: 61 AMTSVRMMETTKQTKLGLDVKKEENLAEWYSQIIVKADMIEYYD---------VSGCYIL 111 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTG-QIPKFADDMFCTTDGRW 227 + + + D + G P+ V A+ I FA ++ T Sbjct: 112 RPWSFAIWEIIKKWFDTEIKKLGVRNCYFPIFVSQNALQREKEHIADFAPEVAWITRAGN 171 Query: 228 --------LIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH 279 + PTSE + Y+ I + LPLR R E + LR Sbjct: 172 SELSEPIAIRPTSETVIYPSYAKWIQSYRDLPLRLNQWCNVVRWE----FKHPTPFLRTR 227 Query: 280 QFWKCELVSI--TREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDL 337 +F E + T++E + A+ L + + T + Sbjct: 228 EFLWQEGHTAFQTKQEAENEVFIILDLYAKVYTDLLAIPVTKGRKSEKEKFAGGDFTTTV 287 Query: 338 EVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 E ++ + ++ G S+ + + DP S + F N G+ R + A++ Sbjct: 288 EAYVPVNGRGIQGATSHHLGQNFSKMFDISFEDPESGAKTFAWQ-NSWGM-TTRTIGAMI 345 Query: 398 ENYLNADGSVTIPTV 412 + + DG V P V Sbjct: 346 MIHSDNDGLVLPPRV 360 >gi|240276106|gb|EER39618.1| heat shock protein [Ajellomyces capsulatus H143] Length = 762 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 7/73 (9%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I LD + + ++E +R + S + L + LK + + +KE + Sbjct: 334 DAIQELDRQIMTIQIELESLRKETDITSKE-------RREKLEELLKTKQNKVKELTAVW 386 Query: 88 EKEEHEVCSSLKK 100 EKE+ E+ + + Sbjct: 387 EKEKAELDTIKQA 399 >gi|225560026|gb|EEH08308.1| heat shock protein [Ajellomyces capsulatus G186AR] Length = 795 Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 7/73 (9%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I LD + + ++E +R + S + L + LK + + +KE + Sbjct: 334 DAIQELDRQIMTIQIELESLRKETDITSKE-------RREKLEELLKTKQNKVKELTAVW 386 Query: 88 EKEEHEVCSSLKK 100 EKE+ E+ + + Sbjct: 387 EKEKAELDTIKQA 399 >gi|222476133|ref|YP_002564654.1| hypothetical protein Hlac_3237 [Halorubrum lacusprofundi ATCC 49239] gi|222454504|gb|ACM58768.1| conserved hypothetical protein [Halorubrum lacusprofundi ATCC 49239] Length = 1158 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 19/55 (34%) Query: 35 EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 ++ R + ++R +N S G+ A L + + LE+ Sbjct: 169 QELREARTDVSELRQEQNELSRLRGELEAARQAQERSELLEQAIDYAQARNQLEQ 223 >gi|223043916|ref|ZP_03613957.1| peptide chain release factor 1 [Staphylococcus capitis SK14] gi|222442631|gb|EEE48735.1| peptide chain release factor 1 [Staphylococcus capitis SK14] Length = 358 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 9/97 (9%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 + + +P+ ++ + K R + + E R K E++ I + + Sbjct: 15 LNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELE--------DIEEMLK 66 Query: 64 E-GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 E + VD LK E+++LK +LP +E+E + Sbjct: 67 ETSDKEEVDMLKEESASLKAELPEMEEELKILLIPKD 103 >gi|242007208|ref|XP_002424434.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] gi|212507834|gb|EEB11696.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] Length = 1186 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 40/112 (35%), Gaps = 20/112 (17%) Query: 5 QWIRQNPEHLDIALK--------KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA 56 I+ N E + + K++LE + E I +E+ + S Sbjct: 831 NSIKTNLEQIQKHQESMRTLEENKKNLEAEVEEIKK----------SVEEAQKELKSIKD 880 Query: 57 QIGQAIAE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 +I + E D + ++ ++ ++ E+++ ++ K+ + Sbjct: 881 KIAKKNKEIIEGNRKKDLILKQSREMELEIKQCEQDKDKLKEEAKECNRRVQ 932 >gi|167390094|ref|XP_001739206.1| vacuolar protein sorting-associated protein [Entamoeba dispar SAW760] gi|165897183|gb|EDR24420.1| vacuolar protein sorting-associated protein, putative [Entamoeba dispar SAW760] Length = 3375 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 13/82 (15%) Query: 17 ALKKRHLE-------------PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 ++KKR Q IL E+ + ++I++ + + + I + + Sbjct: 3225 SIKKRQYNSLDFVGDDIQEEMLQLPRILKKKEQRKSEKQEIKEAKKQMKAEEKAIKKQMK 3284 Query: 64 EGNLSLVDALKNETSTLKEQLP 85 +K E Q Sbjct: 3285 AEEKEHKKQMKQEKRNSNHQGK 3306 >gi|21743784|ref|NP_663715.1| filamin-A-interacting protein 1 [Rattus norvegicus] gi|81866809|sp|Q8K4T4|FLIP1_RAT RecName: Full=Filamin-A-interacting protein 1; Short=FILIP gi|21392399|dbj|BAC00851.1| filamin-interacting protein L-FILIP [Rattus norvegicus] Length = 1212 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 15/79 (18%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVD 71 S+ I L+E N+ L K E+++ R + ++ EG + Sbjct: 338 SQRIEELEETNKSLQKAEEELQELREKIAKGECGNSSLMAEVESLRKRVLEMEGKDEEIT 397 Query: 72 ALKNETSTLKEQLPILEKE 90 + + LK++L E Sbjct: 398 KTEAQCRELKKKLQEEEHH 416 >gi|311255363|ref|XP_003126206.1| PREDICTED: keratin, type II cuticular Hb2-like [Sus scrofa] Length = 514 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L + IE+++A+R I +A +G +L DA K Sbjct: 325 DNLRNRK-----NEILEMNKLIQRLQQDIENVKAQRCKLEGTIAEAEQQGEAALNDA-KC 378 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 379 KLAGLEEALQKAKQDMACLLKEYQEVM 405 >gi|297544412|ref|YP_003676714.1| glycyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842187|gb|ADH60703.1| glycyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 462 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 16/176 (9%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + + L L + R +L + T D+E + Sbjct: 231 KPGEDMEWFNYWRKYCMDWLLEFGLKKENLRFRDHKKEELSHYSTATTDIEYNFPF--GW 288 Query: 348 REISSCSTCGNFQSRR------MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAIL 397 E+ + +F R+ ++ Y DP + + + S V V R ++A L Sbjct: 289 GELWGIANRTDFDLRQHMEHSGVDLSYMDPATGEKYIPYCIEPS-VGVDRLMLAFL 343 >gi|258572046|ref|XP_002544805.1| potential DNA-dependent ATPase Ino80p [Uncinocarpus reesii 1704] gi|237905075|gb|EEP79476.1| potential DNA-dependent ATPase Ino80p [Uncinocarpus reesii 1704] Length = 1668 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 7/82 (8%) Query: 5 QWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 + +++ E +KR E I L+ + KIED A + + +I ++ Sbjct: 379 KEVQEEKERKKDMQRKRRRENTVRHEIEKLNAAQKKA-TKIED-EAEKQKLAKEIAKSKK 436 Query: 64 EGNLSLVD----ALKNETSTLK 81 + + + L E S + Sbjct: 437 KIKDTTLALERGELSQEISEVN 458 >gi|109081260|ref|XP_001094176.1| PREDICTED: GRINL1A complex locus protein 1 isoform 6 [Macaca mulatta] Length = 550 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIECMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|56964827|ref|YP_176558.1| metalloendopeptidase [Bacillus clausii KSM-K16] gi|56911070|dbj|BAD65597.1| metalloendopeptidase [Bacillus clausii KSM-K16] Length = 457 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 42/87 (48%), Gaps = 9/87 (10%) Query: 7 IRQNPEHLDIALKK---RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I++ + + K+ + + +S+ + LD + + L ++++++ + Q Sbjct: 32 IKKQLDDVQEQQKENVEKAEKTESD-LTKLDSELKDLQAELDELKQE-----EETTQQNL 85 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKE 90 + + + ++ + +L+E++ ++E+ Sbjct: 86 DETEAELAEIEADIESLEEEIAVMEER 112 >gi|327400411|ref|YP_004341250.1| hypothetical protein Arcve_0508 [Archaeoglobus veneficus SNP6] gi|327315919|gb|AEA46535.1| protein of unknown function DUF460 [Archaeoglobus veneficus SNP6] Length = 624 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 17/86 (19%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG-- 65 R++ E L I L+E+NRIL +++E +R A+I E Sbjct: 399 REDSEK-RENL-----------IRELEEENRILKEEVEKLREEIERLRARIVSISREEHE 446 Query: 66 ---NLSLVDALKNETSTLKEQLPILE 88 + + +L+ E + L+ ++ + Sbjct: 447 RIRKDNYIRSLEAEIAELRAEIKERD 472 >gi|323305711|gb|EGA59451.1| Bre1p [Saccharomyces cerevisiae FostersB] Length = 585 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 10/96 (10%) Query: 28 EYILSLDEKNRI--------LIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNET 77 + ++ +++ + L K D+RA NS S+ I I GN + ++E Sbjct: 236 DELVQAEDERKEDAENEKLELDLKFSDLRAEINSLSSTIKDLENIRRGNEEELIKTRSEV 295 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 S LK+Q ++ + S + + E+ Sbjct: 296 SNLKKQQIAAADQDPDFKSYDHESLLAKIQHLTEQN 331 >gi|303233759|ref|ZP_07320413.1| glycine--tRNA ligase [Finegoldia magna BVS033A4] gi|302495193|gb|EFL54945.1| glycine--tRNA ligase [Finegoldia magna BVS033A4] Length = 465 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 13/194 (6%) Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL 228 G E+ L + + + + + M+ T Q + ++ Sbjct: 120 GLDGKSEQELLDIIEKEDIKCPDCGKHNFTDIRKFNLMFKTFQGVTEDN----KSEIYLR 175 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 176 PETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEF 231 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQN 345 + + + +E L L + + L +L F + T D E Sbjct: 232 FCKPGTDLEWFDYWRNFCKEFLLNLGIREENLRLRDHSQEELSFYSKATTDFEYLFPF-- 289 Query: 346 LYREISSCSTCGNF 359 + E+ + ++ Sbjct: 290 GWGELWGIADRTDY 303 >gi|242398710|ref|YP_002994134.1| chromosome segregation ATPase [Thermococcus sibiricus MM 739] gi|242265103|gb|ACS89785.1| chromosome segregation ATPase [Thermococcus sibiricus MM 739] Length = 1177 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 7/93 (7%) Query: 10 NPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 N + + +AL R E + I +L + R L +++ ++R R++ S + Sbjct: 665 NTDEIKMALASREKEKDALESQINALKLEQRGLERELFELRVRKSDVSKDLQMLQK---- 720 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 +D NE TLKE++ E E+ S + + Sbjct: 721 -EMDRFLNEDKTLKEEIETAENRLKELESFIHQ 752 Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 55/142 (38%), Gaps = 4/142 (2%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 I+ I ++K+ + +S + L EK + + +++ +R R+ +I Q Sbjct: 833 IEGIVNRINAFKASIKQNEEDIKSLQAQLEELQEKEQAVKDELKALRDERDRLREEISQM 892 Query: 62 IAEGNL--SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 E ++ L+ E ++LK ++ E + E S LK + E++ Sbjct: 893 REEKEKLRDVLQKLRLEANSLKIKMAQYESQLREKESELKHHDVKVVKEIPEDLEKLREE 952 Query: 120 NENILIRSVGKKPSAIHLSREH 141 E + +P + ++ Sbjct: 953 IEQMEDEIRELEPVNMKAIEDY 974 >gi|242024631|ref|XP_002432730.1| paramyosin, putative [Pediculus humanus corporis] gi|212518215|gb|EEB19992.1| paramyosin, putative [Pediculus humanus corporis] Length = 483 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNETSTLKEQLPILEKEEHEVCS 96 LI + E ++ +RN I + E N ++ +K + ++ ++ LE E Sbjct: 405 KLITETEMLKLKRNKIVKDISKLEVEKNKLCLEMEVIKEKKKSVSMKIMCLETEFQTREL 464 Query: 97 SLKKLISCIP 106 +KL I Sbjct: 465 QNEKLRLEIA 474 >gi|160946398|ref|ZP_02093607.1| hypothetical protein PEPMIC_00358 [Parvimonas micra ATCC 33270] gi|158447514|gb|EDP24509.1| hypothetical protein PEPMIC_00358 [Parvimonas micra ATCC 33270] Length = 463 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 70/197 (35%), Gaps = 22/197 (11%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + K +P + SFR+E R +F + EL Sbjct: 176 TAQGIFVNFKNIARTSRKKVPFGIAQVGKSFRNEI----TPGNFTFRTREFEQMELEFFC 231 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + + +E + + L L ++ + L +L F + T D+E + Sbjct: 232 KPGEDLEWYEYWKNYSFNWLLSLGMNEETLRLRDHEKEELSFYSKATCDIEFLFPF--GW 289 Query: 348 REISSCSTCGNFQSRR------MNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 E+ + ++ R + RY DP + + + S A R +A L N Sbjct: 290 GELWGIADRTDYDLSRHIEVSGEDLRYIDPVTNEKYIPYCIEPSLGA-DRVALAFLCNAY 348 Query: 402 NA----DGSVTIPTVLR 414 + +G V TVLR Sbjct: 349 DEEEIGEGDVR--TVLR 363 >gi|116747712|ref|YP_844399.1| ATPase [Syntrophobacter fumaroxidans MPOB] gi|116696776|gb|ABK15964.1| ATPase AAA-2 domain protein [Syntrophobacter fumaroxidans MPOB] Length = 873 Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 13/94 (13%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--- 67 PE LD + +R ++ + E + EK++ +++E +R +IG+ A + Sbjct: 414 PEELDEVM-RRVMQLEIEEVALKKEKDKASQERLEALR-------KEIGELRARTDAMSA 465 Query: 68 --SLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + ++E++ + ++ Sbjct: 466 QWEAEKQAIKKVQAIREEIEKVRRDIEVAERQFD 499 >gi|320449651|ref|YP_004201747.1| hypothetical protein TSC_c05660 [Thermus scotoductus SA-01] gi|320149820|gb|ADW21198.1| conserved hypothetical protein [Thermus scotoductus SA-01] Length = 461 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 40/115 (34%), Gaps = 10/115 (8%) Query: 7 IRQNPEHLDIALK--------KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 R+ E + A +R + E +++ + + ++ +R R S + Sbjct: 67 FREAREVILEAQAIRAERDQLRRERQVLLEAKTAMEAEASRTLAELNVLREERKDLSRAL 126 Query: 59 GQA--IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 QA + + AL ++ L + LE E + L++ + E Sbjct: 127 EQANQVRKRLEEEAKALASQVQALGRERATLEAERQALSQLLEERNRALSERTRE 181 >gi|313159181|gb|EFR58554.1| ATP-dependent chaperone protein ClpB [Alistipes sp. HGB5] Length = 872 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 12/101 (11%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNS-----NSAQIGQAIA 63 + +D A + LE S E I +LD + R L + E IR ++ + +I + + Sbjct: 397 IDLVDEAASRLRLEMNSVPEEIDTLDRRVRQLEIEREAIRREKDKERVEQLTKEIEELKS 456 Query: 64 EGNLSLVD-----ALKNETSTLKEQLPILEKEEHEVCSSLK 99 L K+++ L+ E + Sbjct: 457 RDAEMRAKWQGQRDLLKRIQENKDRIEQLKIEAQQAERQGD 497 >gi|313679014|ref|YP_004056753.1| metal dependent phosphohydrolase [Oceanithermus profundus DSM 14977] gi|313151729|gb|ADR35580.1| metal dependent phosphohydrolase [Oceanithermus profundus DSM 14977] Length = 583 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 13/118 (11%) Query: 3 DIQWIRQNPEHLD---IALKKRHLEPQ-----SEYILS-LDEKNRILIKKIEDI-RARRN 52 D++ IR+ E L L +R + + + L+ + R L+++ E + R R Sbjct: 143 DLEAIRREREELKRQDERLARRGEQLDARAARLDELEEKLNAEERQLVQRAEALDRRERE 202 Query: 53 SNSA--QIGQAIAEG-NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 +I E L+ L E K E + + + Sbjct: 203 IELKLEEIAGLTREEARRQLLARLDEELEEEKAIHVKAAMERARMEAKKQAAHLIAQA 260 >gi|223996757|ref|XP_002288052.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220977168|gb|EED95495.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 2050 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Query: 7 IRQNPEHLDIA--LKKRHLEPQSEYI-LSLDEKNRILIKKIEDIRARRNSNSAQIGQA-I 62 IR+ E ++ + LK R++ Q + + LD N L + ++ RA N S G I Sbjct: 1727 IRRRLEQIEKSTSLKLRNIGQQLLRVNIELDTANGDLRIQKDENRALTNELSNLRGVMDI 1786 Query: 63 AEGNLSLVDALKNETSTL 80 AE ++ + L+ E L Sbjct: 1787 AEESIDELHRLREENERL 1804 >gi|170764280|ref|ZP_02640311.2| phage tail tape measure protein, family, core region [Clostridium perfringens CPE str. F4969] gi|170713844|gb|EDT26026.1| phage tail tape measure protein, family, core region [Clostridium perfringens CPE str. F4969] Length = 933 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 3/103 (2%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE--GNLS 68 + A + + L+ + + L+ N LI ++ N+ A+ Q E N S Sbjct: 48 LNKVYEAQENK-LDAIKKRLKELNSSNEELISSSSKLKNEINTLEAEYNQVANEAGKNSS 106 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 L+++ +LK + +E + S +L + + E Sbjct: 107 EAKELESKLKSLKTEFTQVENAISKNKSEYGQLEMALNSTQAE 149 >gi|158254139|gb|AAI54070.1| LOC100127640 protein [Xenopus (Silurana) tropicalis] Length = 1329 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 18/148 (12%) Query: 5 QWIRQNPEHLDIALKKRHLEPQS----------------EYILSLDEKNRILIKKIEDIR 48 + ++ + L LK R E E I+SL+ + +I+ +R Sbjct: 883 KQLKSDLAKLKEHLKNRDNEFALIRNENETFLCLQSEHNEKIISLENTMKEQACEIQQLR 942 Query: 49 ARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 R + I + AE L E + EQ + E E++ +++ S + Sbjct: 943 QYREAALEDIRKLHAE--NEEKLRLLKEDLMILEQTHLKELEDNLKLRHAQEMESLTSDH 1000 Query: 109 PLEEVPIGTSANENILIRSVGKKPSAIH 136 + + + + Sbjct: 1001 NHSQERVKQDHKRMVDQLVESYNTTIHE 1028 >gi|73945736|ref|XP_862432.1| PREDICTED: similar to Ezrin (p81) (Cytovillin) (Villin-2) isoform 5 [Canis familiaris] Length = 600 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 35/91 (38%), Gaps = 2/91 (2%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGNLSLVDALKNETSTL 80 L Q + L L+E+ + ++ E + A R + + + + A + + L E + Sbjct: 379 LSDQIQRALQLEEERKRAQEEAERLEADRVAALRAKEELERQAADQIKSQEQLAAELAEY 438 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 ++ +LE+ +++ + Sbjct: 439 TAKIALLEEARRRKEDEVEEWQHRAKEAQDD 469 >gi|292614670|ref|XP_002662346.1| PREDICTED: zinc finger protein 629 [Danio rerio] Length = 619 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 35/333 (10%), Positives = 77/333 (23%), Gaps = 31/333 (9%) Query: 9 QNPEHLDIALKK-----RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG---- 59 + + L L+ R + + +L D K + ++ E+++ + N S IG Sbjct: 307 EQVDKLRRELRNARDRERRQKKTMKSLLE-DLKKKNMLT--EELQEQLNFFSELIGGNDE 363 Query: 60 -QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + GN V A K + + K + + ++ P G S Sbjct: 364 SEEERAGNKPRVRAKKKKRNRNTFICTECGKTLASIHNLKTHMMIHTGEKPFPCDQCGKS 423 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + + + + + + ++ Sbjct: 424 FRQPSDHKQHMMTHTGEKPYKCNVCDKAFASASNLKLHLRVHTKEKPYSCSVCGKSFSQS 483 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTN 238 V G T + + E + Sbjct: 484 SSLKTHQKIHTGVKEHVCLEC--GKSFYTGQNL---KKHQRIHTGEKPYKCSYCERGFSQ 538 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 L + E + + ++ H E + E +T Sbjct: 539 LDPMKAHERIHTGEKPYECSHC-----------SKRFNELHNLKMHERIHTG--EKPYTC 585 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTGDLGFSA 331 + A+ + CT L F+ Sbjct: 586 DLCGKAFAQLSNLKKHTSAHEEKNCTHSLQFNN 618 >gi|224085641|ref|XP_002307647.1| condensin complex components subunit [Populus trichocarpa] gi|222857096|gb|EEE94643.1| condensin complex components subunit [Populus trichocarpa] Length = 1232 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 41/147 (27%), Gaps = 6/147 (4%) Query: 18 LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS--LVDALKN 75 L K + + E ++ + R L + + + Q + + ++ K Sbjct: 832 LAKLKYQLEYEQKRDMESRIRKLESSLAALENDLKQVQKKEAQIKLASDKATDEINKWKE 891 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 E K + +E K S + + + + S I S K+ Sbjct: 892 EMKEWKSK----SEECANEIREWTKKGSAVTSNLSKLTRLINSKETQIAQLSSWKQDIVE 947 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGA 162 E+ + MD D Sbjct: 948 KCELENINLPTVSDPMDIDSPIPGPDY 974 >gi|196228305|ref|ZP_03127172.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196227708|gb|EDY22211.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 899 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 43/101 (42%), Gaps = 4/101 (3%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSE-YILS-LDEKNRILIKKIEDIRARRNSNSAQIGQA 61 I+ ++ AL+ ++ +++ LD++ + ++KI + +RN+ + + Sbjct: 244 IKGLQTEVTASKKALRDLRIDAEADAEFRKQLDDRYKKALEKIASLTEQRNAANDAVKAT 303 Query: 62 IAEGN--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + + +D +K E L +L E + +V S Sbjct: 304 PGKIDAIQKQLDQVKKEKDDLSTKLQKAETQLSKVTSERDD 344 >gi|326474552|gb|EGD98561.1| dynactin [Trichophyton tonsurans CBS 112818] Length = 1352 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 5/102 (4%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED---IRARRNSNSAQIGQAIAE 64 R E + L+++ +PQ + I +L ++ + ++E+ ++A S ++ E Sbjct: 337 RDKFETIIQKLREK-YQPQQQEITTLRKQLKEAEYRVEEVERLQAEHESI-LEMAALDRE 394 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + +++K E LK + LE E + +L + Sbjct: 395 MAEEVAESIKAEYEALKIRTEELELEVEVLKEENDQLGQIMS 436 >gi|326428466|gb|EGD74036.1| hypothetical protein PTSG_05730 [Salpingoeca sp. ATCC 50818] Length = 2081 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Query: 13 HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLV 70 L A KR + E + +LD + R L ED AR + + Q+ A A E S V Sbjct: 856 ALKEAEDKR--DALQEELNTLDARARELTAAKEDAEARAATLTDQVAAAKADREAQASAV 913 Query: 71 DALKNETSTLKEQLP 85 + E + LK ++ Sbjct: 914 QQKEEEVAALKAEVQ 928 >gi|156837599|ref|XP_001642821.1| hypothetical protein Kpol_388p6 [Vanderwaltozyma polyspora DSM 70294] gi|156113393|gb|EDO14963.1| hypothetical protein Kpol_388p6 [Vanderwaltozyma polyspora DSM 70294] Length = 504 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 46/121 (38%), Gaps = 12/121 (9%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG- 59 ML+ +R+ + L + E S +++ +K+ +++ N + +G Sbjct: 92 MLENFQLRKQLDAFTKQLSIAYYERDSAKLIAA-----KTLKEKDELANEINKLTKLMGT 146 Query: 60 ----QAIAEGNLSLVDALKNETSTLKE--QLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 + I + N + LK E+ + E QL ++ + + +L +++ Sbjct: 147 IDEEKIIIQINDDFKEKLKQESKSYLEFTQLNKIQDKYKLPSLTKTELSKTWDITINDKI 206 Query: 114 P 114 Sbjct: 207 Y 207 >gi|85091046|ref|XP_958710.1| hypothetical protein NCU09644 [Neurospora crassa OR74A] gi|26251318|gb|AAK15754.2|AF329401_1 UVS-3 [Neurospora crassa] gi|28920092|gb|EAA29474.1| predicted protein [Neurospora crassa OR74A] Length = 969 Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 38/137 (27%), Gaps = 3/137 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R + DE R L ++ ++R + + + + + LK E + Sbjct: 180 RGAGQDVDK--QKDETIRSLEAELSNLRTQL-TTAKGEANLMRSKYDRDIPQLKKEMAEE 236 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 K ++ +E + + + EE + + + Sbjct: 237 KAKMEKRLQEAQKAQQAASNELLFANADLQEERGRAKTKKVGKDGAMTPGGRNKTKWIPD 296 Query: 141 HFEIGEALGLMDFDRAT 157 F + G+ R Sbjct: 297 GFSDVDVSGMGSPSRDK 313 >gi|329769568|ref|ZP_08260975.1| hypothetical protein HMPREF0433_00739 [Gemella sanguinis M325] gi|328838579|gb|EGF88183.1| hypothetical protein HMPREF0433_00739 [Gemella sanguinis M325] Length = 848 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 3/152 (1%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 N +D LK + E ++ + L E L E + + + E + Sbjct: 153 NSSSIDKNLKSKQSE-EASLLAKLKEDKNKLNTLTESLNKIEKD--KEKSEKALEEAQAA 209 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 ++ K E + ++ LE + E + L + N E+V I +N I V Sbjct: 210 LNKAKEEEAENLNKIKQLEAKRDEQQAVLNNKQKQLENAKAEKVKIEDEIKKNEAIFGVK 269 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSG 161 + I +E + + F+ K G Sbjct: 270 GILTEIKFDQEFVDALKTYQKASFEEQQKTIG 301 >gi|301773184|ref|XP_002922012.1| PREDICTED: LOW QUALITY PROTEIN: angiomotin-like [Ailuropoda melanoleuca] Length = 1067 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 6/114 (5%) Query: 1 MLDIQ-WIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 490 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 549 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 550 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 603 >gi|168209068|ref|ZP_02634693.1| hypothetical protein AC1_0425 [Clostridium perfringens B str. ATCC 3626] gi|170712794|gb|EDT24976.1| hypothetical protein AC1_0425 [Clostridium perfringens B str. ATCC 3626] Length = 203 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 9/79 (11%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 23 LEPQSEYI------LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 + P+ + + L + + + + ++++ ++ N+ S ++ + L + A K E Sbjct: 40 VAPKVDELEYKIPALKNNTELKSIQEEVDKLQNENNTLSKEV--EDKQKELDNLRAKKEE 97 Query: 77 TSTLKEQLPILEKEEHEVC 95 + + ++ +E + Sbjct: 98 QAKIAQEESKKSEENSKNK 116 >gi|123449445|ref|XP_001313441.1| viral A-type inclusion protein [Trichomonas vaginalis G3] gi|121895325|gb|EAY00512.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3] Length = 1798 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 2/85 (2%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA-QIGQAIAEGNLSLVDALK 74 LKK++ E S+ I DE+ + L +IE I ++ QI ++ L+ Sbjct: 1545 ENLKKQNEEF-SKQISLKDEEIQTLRNEIEKINKEKDEILKNQIQESEKSDKSEANSDLE 1603 Query: 75 NETSTLKEQLPILEKEEHEVCSSLK 99 E + LK +L +E Sbjct: 1604 KENAELKRKLSEYSTQEEMNDQIQT 1628 >gi|121704612|ref|XP_001270569.1| DNA repair protein Rad18, putative [Aspergillus clavatus NRRL 1] gi|119398715|gb|EAW09143.1| DNA repair protein Rad18, putative [Aspergillus clavatus NRRL 1] Length = 1132 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 54/150 (36%), Gaps = 2/150 (1%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 D + I ++ + ++ L+ R + + + ++ + E +RAR + Q+ A Sbjct: 272 DYRLIEESADQIEEKLRSREQDIKILKDFKETADRKLERSDQQESLRARVRNVRNQMAWA 331 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 E L D+L +E + + E L E E V +++ + + V TS + Sbjct: 332 QVEEQEQLRDSLDHELARIDEDLATAETELSGVDVTIQHAENECAAAA-DFVSQATSRLD 390 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLM 151 K E ++ + Sbjct: 391 QAQSEKNEIKAKWDEQMSERHDLQAEQRQI 420 >gi|190571808|ref|YP_001966487.1| TraF [Lactococcus lactis] gi|108736207|gb|ABG00336.1| TraF [Lactococcus lactis] Length = 413 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 4/108 (3%) Query: 2 LDIQW--IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 LD++ + ++ + L +K + S+ I+ L + E ++ N + Sbjct: 255 LDLRLALLNKDIDFLKKNIKSVDSQALSDRIVKLFIDEKEYASANEQLKFFANKALDK-- 312 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 QA + AL N+ + LK+ + +K+ + L L + + Sbjct: 313 QAKQAEHDDKKQALTNKVNELKKAVSDTQKQLDGKNTQLSDLHKQLDD 360 >gi|73998448|ref|XP_863722.1| PREDICTED: similar to internexin neuronal intermediate filament protein, alpha isoform 2 [Canis familiaris] Length = 462 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 146 ELRDLRAQLEEASSA 160 >gi|50292471|ref|XP_448668.1| hypothetical protein [Candida glabrata CBS 138] gi|49527980|emb|CAG61631.1| unnamed protein product [Candida glabrata] Length = 917 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 6/75 (8%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M ++ +R + KK+ + + + + L + L +++++ N AQI + Sbjct: 506 MH-LRKLRHEVDVYRN--KKKKYQKEIDE-MKL--ARKELKLSLDNLQQEWNQLRAQIDE 559 Query: 61 AIAEGNLSLVDALKN 75 +I + N + + Sbjct: 560 SIIDHNDEDLSMISE 574 >gi|326436941|gb|EGD82511.1| AGC/DMPK/GEK protein kinase [Salpingoeca sp. ATCC 50818] Length = 1740 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 47/127 (37%), Gaps = 8/127 (6%) Query: 4 IQWIRQNPEHLDIA---LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ++ +R +P+ ++R+ + + + L ++ + A N+ + Sbjct: 918 LKELRLSPKTFLEKHQRQQRRNQKVERLELRQLQQERDQEAQAKNQALAELNAL-----R 972 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A E + A+++E LK ++ +L +E + K+ S L +A+ Sbjct: 973 ARQEAEAQELIAIRSENKALKNEVNLLAEERDRLQHDAKRRGSLSSGYTLNVSQQHDAAS 1032 Query: 121 ENILIRS 127 + Sbjct: 1033 SRSSTHN 1039 >gi|326407975|gb|ADZ65043.1| conjugation protein [Lactococcus lactis subsp. lactis CV56] Length = 403 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 4/108 (3%) Query: 2 LDIQW--IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 LD++ + ++ + L +K + S+ I+ L + E ++ N + Sbjct: 245 LDLRLALLNKDIDFLKKNIKSVDSQALSDRIVKLFIDEKEYASANEQLKFFANKALDK-- 302 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 QA + AL N+ + LK+ + +K+ + L L + + Sbjct: 303 QAKQAEHDDKKQALTNKVNELKKAVSDTQKQLDGKNTQLSDLHKQLDD 350 >gi|291239605|ref|XP_002739711.1| PREDICTED: kinesin family member 20A-like [Saccoglossus kowalevskii] Length = 2595 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%) Query: 13 HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 + + KR ++ ++ + +EK L +++ ++ + +Q+ +A D Sbjct: 1682 KIKDSELKREVKILTKNLKKAEEKASALEHEVKQLQGQVKQVESQVEEAKKSAEKEQKDF 1741 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 E+ K+ EK + SC+ Sbjct: 1742 KMRESQYKKDLKSSKEKIVKFEEGMESRKNSCL 1774 >gi|27468634|ref|NP_765271.1| peptide chain release factor 1 [Staphylococcus epidermidis ATCC 12228] gi|57867593|ref|YP_189289.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A] gi|251812171|ref|ZP_04826644.1| peptide chain release factor 1 [Staphylococcus epidermidis BCM-HMP0060] gi|282876474|ref|ZP_06285340.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135] gi|293366082|ref|ZP_06612770.1| peptide chain release factor RF1 [Staphylococcus epidermidis M23864:W2(grey)] gi|32171533|sp|Q8CNI7|RF1_STAES RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71153098|sp|Q5HMA4|RF1_STAEQ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|27316181|gb|AAO05315.1|AE016749_261 peptide chain release factor RF-1 [Staphylococcus epidermidis ATCC 12228] gi|57638251|gb|AAW55039.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A] gi|251804268|gb|EES56925.1| peptide chain release factor 1 [Staphylococcus epidermidis BCM-HMP0060] gi|281294726|gb|EFA87254.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135] gi|291319805|gb|EFE60163.1| peptide chain release factor RF1 [Staphylococcus epidermidis M23864:W2(grey)] gi|329726142|gb|EGG62614.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU144] gi|329734173|gb|EGG70491.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU045] gi|329735695|gb|EGG71978.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU028] Length = 358 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 13/90 (14%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA---RRNSNSAQIGQ 60 + + +P+ ++ A K R + + + R K E+++ N S Sbjct: 15 LNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQDIEDMLNETS----- 69 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKE 90 + V+ LK E+S LK +LP +E+E Sbjct: 70 -----DKEEVEMLKEESSALKTELPDMEEE 94 >gi|325678778|ref|ZP_08158376.1| glycine--tRNA ligase [Ruminococcus albus 8] gi|324109282|gb|EGC03500.1| glycine--tRNA ligase [Ruminococcus albus 8] Length = 461 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 63/195 (32%), Gaps = 15/195 (7%) Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL 228 + ++ + + + + + M+ T Q T R+L Sbjct: 113 NVAGWSNEQMMDYIKEKSIPCPNCGKHNFTDIRQFNLMFKTFQGITED-----TKSERYL 167 Query: 229 IP-TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 P T++ N + + K +P + SFR+E + R +F + EL Sbjct: 168 RPETAQGIFVNFANIQRTTRKKVPFGVAQVGKSFRNEI----TPGNFIFRVREFEQMELE 223 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + + + + L L++ + R+ +L F + T D E Sbjct: 224 FFCKPGTDLEWFDYWRTFCKNFLLSLNIKEENLRLRDHSAEELCFYSKATTDFEYLFPF- 282 Query: 345 NLYREISSCSTCGNF 359 + E+ + ++ Sbjct: 283 -GWGELWGVADRTDY 296 >gi|320527867|ref|ZP_08029035.1| hypothetical protein HMPREF9430_01148 [Solobacterium moorei F0204] gi|320131804|gb|EFW24366.1| hypothetical protein HMPREF9430_01148 [Solobacterium moorei F0204] Length = 518 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + I ++++ + L KI+ + +++ + + L++E +LKE+ Sbjct: 152 ELSKDDISKIEKEAKELQDKIDKLNCELKDKDK-----LSDKQKNKIKDLEDEIDSLKEK 206 Query: 84 LPILEKEEHEVCSSLKK 100 + + + K+ Sbjct: 207 MKKDKGNKDLSEDMKKE 223 >gi|126273165|ref|XP_001369078.1| PREDICTED: similar to Internexin neuronal intermediate filament protein, alpha [Monodelphis domestica] Length = 495 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 85 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 142 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 143 ELRELRAQLEEASSA 157 >gi|109090458|ref|XP_001113681.1| PREDICTED: alpha-internexin-like isoform 3 [Macaca mulatta] Length = 499 Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 146 ELRDLRAQLEEASSA 160 >gi|281342876|gb|EFB18460.1| hypothetical protein PANDA_011886 [Ailuropoda melanoleuca] Length = 1527 Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 603 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 660 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + V ++ Sbjct: 661 EDEQRNSAADTSVGEEEREDF 681 >gi|242006692|ref|XP_002424181.1| THO complex subunit, putative [Pediculus humanus corporis] gi|212507522|gb|EEB11443.1| THO complex subunit, putative [Pediculus humanus corporis] Length = 1370 Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 14/223 (6%), Positives = 48/223 (21%), Gaps = 24/223 (10%) Query: 39 ILIKKIEDIRARRNSN---------SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 L +E + N S ++ + + +AL + +++ + Sbjct: 889 DLQVPVESYQKEINRIKQSSILGIDSKEMATSKGKKEQERFNALMEKLQDERKKQQEHVE 948 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + K ++ + + + + L Sbjct: 949 KVMARLKQEKDSWFPTKSLRSPKNESIMKFLQLCIFPRCIFTSLDALYCFKFIYTIHMLK 1008 Query: 150 LMDFDRATKLSGARFSVLTGHLAHLERALGQF----------MIDLHTSEHGYTEVSAPL 199 +F L + E ++ ++ H + + + Sbjct: 1009 TANFSTLLCLDKLLCDLTYTVTFCTENEAHRYGRFLCCVLELVMRWHGDVNIFEAECSNH 1068 Query: 200 LVRDEAMYGTGQIPKFADDM-----FCTTDGRWLIPTSEVSLT 237 + +D++ T + + Sbjct: 1069 PGFVTKYRASNHFSDASDEVSYENYRHVCHKWHYKITKAILVC 1111 >gi|260913389|ref|ZP_05919870.1| DNA recombination protein RmuC-like protein [Pasteurella dagmatis ATCC 43325] gi|260632620|gb|EEX50790.1| DNA recombination protein RmuC-like protein [Pasteurella dagmatis ATCC 43325] Length = 539 Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 5/72 (6%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 ++ DEK L K++++ +AR N S +I + +L++QL + Sbjct: 83 RLIERDEKLGYLQKELDEEQARHNEISEKITALK-----ERFGIASAQAESLEKQLEHSQ 137 Query: 89 KEEHEVCSSLKK 100 + ++ Sbjct: 138 SNFYRKEQENRE 149 >gi|154338529|ref|XP_001565489.1| ML protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062538|emb|CAM42401.1| putative basal body component [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1438 Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 49/138 (35%), Gaps = 15/138 (10%) Query: 4 IQWIRQNPEHLD-----------IALKKRHLEPQSE--YILSLDEKNRILIKKIEDIRAR 50 I ++R E A + R + + + + + R +++E + R Sbjct: 1275 INFLRGQLETARLSHERVANDHQAAQRTRDMRLDAAQAELATAVAERRRCQREVESLEQR 1334 Query: 51 RNSNSAQIGQAIAEGNL--SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + ++ + + A K ETS L+E+ +E ++ +SL + + ++ Sbjct: 1335 VRELTKEVQALRRQEADILGQLQAYKAETSALRERCANVESLKNISEASLAETQARERDL 1394 Query: 109 PLEEVPIGTSANENILIR 126 + + + L Sbjct: 1395 MDKLEELRNAQQLMQLCF 1412 >gi|332665301|ref|YP_004448089.1| ATPase AAA-2 domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332334115|gb|AEE51216.1| ATPase AAA-2 domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 898 Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 12/104 (11%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNS-----NSAQIGQAIA 63 + +D A + LE S E I D K R L + E ++ +N I A Sbjct: 390 IDLIDEAAARLRLELDSLPEEIDEWDRKVRQLEIEREAVKREKNKKQQDLIEENIANAKQ 449 Query: 64 EGNL-----SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L + +K+++ LE + + + Sbjct: 450 KRDSLMAAWKGEKELVDTVQGVKKKMEELEIQAERAERASDYEM 493 >gi|328725078|ref|XP_003248338.1| PREDICTED: glycyl-tRNA synthetase-like, partial [Acyrthosiphon pisum] Length = 323 Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 171 TAQGIFVNYKNVQRSMRKKLPFGIAQVGKSFRNEI----TPGNFIFRTREFEQMELEFFC 226 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + A + LK L + L D L + T D+E + Sbjct: 227 KPGTEIEWQNYWKDFAAKWLKDLGIKEENTKLRDHDEDELSHYSNATTDIEYKFPF--GW 284 Query: 348 REISSCSTCGNF 359 E+ ++ ++ Sbjct: 285 GELWGIASRTDY 296 >gi|319945966|ref|ZP_08020216.1| secreted protein [Streptococcus australis ATCC 700641] gi|319748031|gb|EFW00275.1| secreted protein [Streptococcus australis ATCC 700641] Length = 415 Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 2/131 (1%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETST 79 + + I + D K L K + +A + +Q+ + + + D L E++ Sbjct: 26 GADSTDDKIAAQDSKIADLSSKEQSAQAEVDQIQSQVSEIKKQQETLKAENDRLNEESAR 85 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 L ++ L K SL I + L ++ + + ++ Sbjct: 86 LSAEIGELSKNIVARQESLANQARSAQTTGTATSYINAIVSSGSLTEAISRVSAMNEIAS 145 Query: 140 EHFEIGEALGL 150 + ++ E Sbjct: 146 ANNKMLEEQKR 156 >gi|307178763|gb|EFN67377.1| hypothetical protein EAG_04839 [Camponotus floridanus] Length = 678 Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 12/104 (11%) Query: 1 MLDIQWIRQNPEHLDI--ALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA--RRNSNSA 56 M DI +R + + AL+ R+ E +++ N+ L +I ++ A Sbjct: 312 MDDIDAVRDDLQSTKQMLALELRNKE-------AVERDNKRLQARILNLEAEVEHMKLQK 364 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 Q + + L ++LK E ++ EKE K Sbjct: 365 N-AQENKQQDEKLAESLKQEVQQARKDAEKAEKEYASAAEERDK 407 >gi|58271538|ref|XP_572925.1| topoisomerase I [Cryptococcus neoformans var. neoformans JEC21] gi|134115128|ref|XP_773862.1| hypothetical protein CNBH3140 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256490|gb|EAL19215.1| hypothetical protein CNBH3140 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229184|gb|AAW45618.1| topoisomerase I [Cryptococcus neoformans var. neoformans JEC21] Length = 881 Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 50/159 (31%), Gaps = 24/159 (15%) Query: 8 RQNPEHLDIALKKRHLEPQSEYIL------------SLDEKNRILIKKIEDIRARRNSNS 55 R E L+ AL+ + ++ + LDE+ + + ++++ R Sbjct: 732 RHEAELLEKALENAKKKWDTDNVKLEGDGKKKKTKGELDERLSEIKAEFKELKKERK--- 788 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + I + + L + + + E++ + + + + + + + I Sbjct: 789 ---AKKIDAKRGATEEKLLAQVARIDERIATAKVQLQD-----RDKLKDVALGTSKINYI 840 Query: 116 GTS-ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF 153 V + RE F EA D+ Sbjct: 841 DPRLTVAWAKKFDVPLEKLFSKTLREKFPWAEAEAGPDW 879 >gi|83273857|ref|XP_729582.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23487793|gb|EAA21147.1| protein mix-1, putative [Plasmodium yoelii yoelii] Length = 1227 Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 14/116 (12%) Query: 3 DIQWIRQNPEHLDIALKK-------RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 DIQ I N +++ ++ + ++ + I EK R +K + D + R N Sbjct: 744 DIQIISNNLSNIENRIETSKYGCLSKKIDNAKDEI----EKGREELKTLYDDQKRLNEII 799 Query: 56 AQIGQAIAE---GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 ++ + I + + LK+ LK ++ LE EE++ + L+ I N Sbjct: 800 RKLEKDITDYENNKDKKEEDLKDSVKKLKNKIKQLETEENKKKEQVDDLLMQIENF 855 >gi|297621599|ref|YP_003709736.1| hypothetical protein wcw_1379 [Waddlia chondrophila WSU 86-1044] gi|297376900|gb|ADI38730.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044] Length = 516 Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 54/168 (32%), Gaps = 17/168 (10%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDI-RARRNSNSAQIGQAI 62 ++ +R+ P + + + K + + E+ +A N +I Sbjct: 332 VKQLREEIAEAKK--------PLLDLLKEEEVKRKKAQLEKEEQRQAAVNQVEEKISDLN 383 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP--------LEEVP 114 + + DAL LK ++ L+ + E L+ + L E P Sbjct: 384 SNYSKMEADALVRAIEDLKSEIGSLQIPDIEKEGMLRSFVHVEDAAIEKKDREEKLPEDP 443 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGA 162 + ++ ++ S I E + +DF+++ + Sbjct: 444 LELKNALQKRLQFKQERRSLIKDKFEEYRKASGSSGLDFEQSLHYNQQ 491 >gi|195012438|ref|XP_001983643.1| GH15459 [Drosophila grimshawi] gi|193897125|gb|EDV95991.1| GH15459 [Drosophila grimshawi] Length = 1113 Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats. Identities = 29/267 (10%), Positives = 55/267 (20%), Gaps = 27/267 (10%) Query: 55 SAQIGQ-AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 + Q GQ A S V +L E + + + + + + Sbjct: 771 AKQAGQTAKRRPAQSAVQSL--EGGKCTVEGCMFRFKSPTTLEYHGRCHNGSLGSTQPMI 828 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF------DRATKLSGARFSVL 167 + + + H + + K+ + Sbjct: 829 CPECRSTQFSNWNCLHTHLWRTHEIDMELYCCQLCSFKTPIYSRLVNTHAKIHSEERNYK 888 Query: 168 TGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMY----------GTGQIPKFAD 217 + Q +SA + +E M GT + Sbjct: 889 CEQCGKGFKNTKQLKNHRRLHRTQGLGMSAKPSISEEQMALPILHRCEDCGTAFKHRK-- 946 Query: 218 DMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPS--FRSEAGSAGRDTRGM 275 T +E SL L + S F+ E + Sbjct: 947 ----TLREHLCKQRNEQPQCTTCQRVFSSKSSLKLHMRSHQESKRFKCEKCDHEANDHNA 1002 Query: 276 LRQHQFWKCELVSITREEDSFTEHERM 302 R+H E F + Sbjct: 1003 FRRHLATHREAKRYACPHCDFKAIQST 1029 >gi|306520347|ref|ZP_07406694.1| putative cell surface protein [Clostridium difficile QCD-32g58] Length = 408 Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + I ++++ + L K++ + +++ + + L++E +LKE+ Sbjct: 42 ELSKDDISKIEKEAKELQDKLDKLNCELKDKDK-----LSDKQKNKIKDLEDEIDSLKEK 96 Query: 84 LPILEKEEHEVCSSLKK 100 + + + K+ Sbjct: 97 MKKDKGNKDLSEDMKKE 113 >gi|114625182|ref|XP_520097.2| PREDICTED: kinesin family member 27 isoform 3 [Pan troglodytes] Length = 1402 Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 4 IQWIRQNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ ++ + LK+R +++ LDE+ + L +++E + +R Sbjct: 893 LKLKAEDLDAC--NLKRRKCSFGSIDHLQKLDEQKKWLDEEVEKVLNQRQELEELEADLK 950 Query: 63 A-EGNLSLVDALKNETSTLKEQ 83 E +S +AL E S L+ + Sbjct: 951 KWEAIVSKKEALLQEKSHLENK 972 >gi|327349364|gb|EGE78221.1| hypothetical protein BDDG_01158 [Ajellomyces dermatitidis ATCC 18188] Length = 795 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 7/83 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I LD + + ++E +R + S + L + LK + +KE + Sbjct: 334 DAIQELDRQIMTIQIELESLRKETDITSKE-------RREKLEELLKTKQDKVKELTDVW 386 Query: 88 EKEEHEVCSSLKKLISCIPNVPL 110 EKE+ E+ + + Sbjct: 387 EKEKAELDAIKQAKEDLERARVD 409 >gi|325265437|ref|ZP_08132160.1| DNA gyrase, A subunit [Clostridium sp. D5] gi|324029295|gb|EGB90587.1| DNA gyrase, A subunit [Clostridium sp. D5] Length = 833 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 9/219 (4%) Query: 4 IQWIR--QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIK-KIEDIRARRNSNSAQIGQ 60 I+ IR +N + L R + +D + R L + E + + +IG+ Sbjct: 399 IKIIRASKNVQIAKEELIARFDLTDVQAQAIVDMRLRALTGLEREKLESEYEELMKKIGE 458 Query: 61 AIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 A L+ ++ E + ++ E + IS +P E V I + Sbjct: 459 LKAILADRKLLLSVIREEILIINDK---YGDERRTSIGFDEFDISMEDLIPRENVVITMT 515 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 I +V S + + + L S + + + + R Sbjct: 516 KLGYIKRMTVDTFKSQNRGGK-GIKGMQTLDEDYIKELFITSTHHYIMFFTNTGRVYRIK 574 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 G + + + G ++ L+ DE + I ++ D Sbjct: 575 GYEIPEASRTARGTAIINILQLMPDEKITAMIPIKEYED 613 >gi|313216052|emb|CBY37434.1| unnamed protein product [Oikopleura dioica] Length = 2071 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 10/111 (9%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR----NSNSAQ-- 57 IQ +R+ + L + +R + I L E+NR L KK++D+R + S Sbjct: 1674 IQDLRREKDELVSMIGQR--SSDQKKIEKLREENRDLQKKLDDVRKESRLEAKTLSEASN 1731 Query: 58 IGQAIAEGN--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 I Q + E L + LK + LK Q+ + S+ + Sbjct: 1732 IKQVLREKQHYQELSEDLKVDIQKLKNQMNEKTRYHSTSSSNNELTRMLEK 1782 >gi|302380356|ref|ZP_07268826.1| glycine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|302311846|gb|EFK93857.1| glycine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] Length = 465 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 56/172 (32%), Gaps = 13/172 (7%) Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSL 250 + + + + M+ T Q + ++ T++ N + + K + Sbjct: 142 ECGKHNFTDIRKFNLMFKTFQGVTEDN----KSEIYLRPETAQGIFVNFKNVQRTSRKKV 197 Query: 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEIL 310 P + SFR+E + R +F + EL + + + +E L Sbjct: 198 PFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFCKPGTDLEWFDYWRNFCKEFL 253 Query: 311 KRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359 L + + L +L F + T D E + E+ + ++ Sbjct: 254 LNLGIRGENLRLRDHSQEELSFYSKATTDFEYLFPF--GWGELWGIADRTDY 303 >gi|289622081|emb|CBI51259.1| putative ZIP1 protein [Sordaria macrospora] Length = 4070 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 46/107 (42%), Gaps = 8/107 (7%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILS-LDEKNRILIKKIED---IRARRNSNSAQIGQAIA 63 R N E L+ +K L + K++ L++K E ++A + ++++ + Sbjct: 2757 RANIEKLEKDVK--GLAADIAKLKEDAAAKDKSLVQKTEAVEHLKADISDLNSEVAKLKK 2814 Query: 64 EG--NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 EG + + + E +TL++++ L + + KK + N Sbjct: 2815 EGVDKDAEIQGKEKELATLRKEIRELNNQAKQSAQDSKKSAKDLANR 2861 >gi|239608179|gb|EEQ85166.1| heat shock protein 78 [Ajellomyces dermatitidis ER-3] Length = 706 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 7/83 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I LD + + ++E +R + S + L + LK + +KE + Sbjct: 334 DAIQELDRQIMTIQIELESLRKETDITSKE-------RREKLEELLKTKQDKVKELTDVW 386 Query: 88 EKEEHEVCSSLKKLISCIPNVPL 110 EKE+ E+ + + Sbjct: 387 EKEKAELDAIKQAKEDLERARVD 409 >gi|261203579|ref|XP_002629003.1| heat shock protein 78 [Ajellomyces dermatitidis SLH14081] gi|239586788|gb|EEQ69431.1| heat shock protein 78 [Ajellomyces dermatitidis SLH14081] Length = 795 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 7/83 (8%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + I LD + + ++E +R + S + L + LK + +KE + Sbjct: 334 DAIQELDRQIMTIQIELESLRKETDITSKE-------RREKLEELLKTKQDKVKELTDVW 386 Query: 88 EKEEHEVCSSLKKLISCIPNVPL 110 EKE+ E+ + + Sbjct: 387 EKEKAELDAIKQAKEDLERARVD 409 >gi|225621530|ref|YP_002722789.1| hypothetical protein BHWA1_02634 [Brachyspira hyodysenteriae WA1] gi|225216351|gb|ACN85085.1| hypothetical protein BHWA1_02634 [Brachyspira hyodysenteriae WA1] Length = 531 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 4/99 (4%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 N E L+KR + + L+E+ R + K E+++ + + ++ + Sbjct: 98 NNAEI--NKLQKRLEKLEKTN-QKLEEEKRKIELKNEELKQKAREALKSKSEISSKTAKT 154 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 +ALK E LKEQL E+E+ E+ + LK+ ++ + N Sbjct: 155 DREALK-EIKALKEQLLESEQEKKELRAKLKEAVADLKN 192 >gi|260805853|ref|XP_002597800.1| hypothetical protein BRAFLDRAFT_100555 [Branchiostoma floridae] gi|229283068|gb|EEN53812.1| hypothetical protein BRAFLDRAFT_100555 [Branchiostoma floridae] Length = 1243 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 30/96 (31%), Gaps = 8/96 (8%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL--------VDALKNETSTLKEQ 83 L+++ R + +++A A + + ++ L E LK Sbjct: 215 ELEQERRRWETEKAELQASVKKLQKMEANARKDKSKEDSVVSLKRKLETLMQENRKLKSN 274 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 L + S L +L + + + ++ Sbjct: 275 LTESNTTAAVLKSELTQLQAELEEKCEDLDRWERNS 310 >gi|16800394|ref|NP_470662.1| DNA topoisomerase IV subunit A [Listeria innocua Clip11262] gi|16413799|emb|CAC96557.1| parC [Listeria innocua Clip11262] Length = 818 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 9/92 (9%) Query: 2 LD--IQWIRQNPEHLDIALKKR----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR + + D L + E Q+E I+SL + R+ I ++++ + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTTYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKELA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI LV LK+E + +K++ Sbjct: 448 EQISILEKILGDEAELVAVLKSELADIKKKYK 479 >gi|40807469|ref|NP_005870.2| TRAF-interacting protein [Homo sapiens] gi|30580637|sp|Q9BWF2|TRAIP_HUMAN RecName: Full=TRAF-interacting protein; AltName: Full=RING finger protein 206 gi|12653089|gb|AAH00310.1| TRAF interacting protein [Homo sapiens] gi|17939477|gb|AAH19283.1| TRAF interacting protein [Homo sapiens] gi|119585429|gb|EAW65025.1| TRAF interacting protein, isoform CRA_a [Homo sapiens] gi|307685785|dbj|BAJ20823.1| TRAF interacting protein [synthetic construct] gi|312152286|gb|ADQ32655.1| TRAF interacting protein [synthetic construct] Length = 469 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 50/141 (35%), Gaps = 31/141 (21%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNS----N 54 LD ++++ +++ L ++ D++ R I+ +R RN+ Sbjct: 74 LDAEFLKNELDNVRAQLSQK------------DKEKRDSQVIIDTLRDTLEERNATVVSL 121 Query: 55 SAQIGQA-------IAEGN-----LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 +G+A + + E L+ ++ +E+ E + S ++ Sbjct: 122 QQALGKAEMLCSTLKKQMKYLEQQQDETKQAQEEARRLRSKMKTMEQIELLLQSQRPEVE 181 Query: 103 SCIPNVPLEEVPIGTSANENI 123 I ++ + + + A + Sbjct: 182 EMIRDMGVGQSAVEQLAVYCV 202 >gi|291413371|ref|XP_002722945.1| PREDICTED: leucine rich repeat (in FLII) interacting protein 1-like isoform 1 [Oryctolagus cuniculus] Length = 633 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 7/82 (8%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN---- 66 + AL++R E E I L +K +++I D++ +IG + Sbjct: 360 FADVKEALRQR--EAMLEEIRQLQQKQASSLREISDLQETIEWKDKKIGALERQKEFFDS 417 Query: 67 -LSLVDALKNETSTLKEQLPIL 87 S D L+ E TLKE L Sbjct: 418 IRSERDDLREEVVTLKEALKKH 439 >gi|282882779|ref|ZP_06291386.1| putative copper amine oxidase domain protein [Peptoniphilus lacrimalis 315-B] gi|281297440|gb|EFA89929.1| putative copper amine oxidase domain protein [Peptoniphilus lacrimalis 315-B] Length = 283 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 29/79 (36%), Gaps = 4/79 (5%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 I+++ + +K E + + E + L ++ ++ + + ++ + + E Sbjct: 42 IKKDTKEAKEDIK----EAKKDLKEEAKEAKKDLKEEAKEAKKDLKEETKEVKKDLKEEA 97 Query: 67 LSLVDALKNETSTLKEQLP 85 LK E K+ Sbjct: 98 KEAKKDLKEEAKEAKKDAK 116 >gi|212547197|ref|XP_002153751.1| hypothetical protein PMAA_102780 [Penicillium marneffei ATCC 18224] gi|210064407|gb|EEA18504.1| hypothetical protein PMAA_102780 [Penicillium marneffei ATCC 18224] Length = 285 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 40/104 (38%), Gaps = 3/104 (2%) Query: 8 RQNPEHLD-IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 R++ +D + KR ++ +E +L+++N+ L ++ ++ + Q + + Sbjct: 127 REDSNVVDFQSRIKRFVKEVTEPYEALEQENKRLNQESHQLKKDKEQLQKDKEQL--QKD 184 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + K + K+QL + + K+ + Sbjct: 185 KEQLRKNKEQLQKDKKQLQLQIQYLRRQIDEQKRRNILKCALCH 228 >gi|169824587|ref|YP_001692198.1| glycyl-tRNA synthetase [Finegoldia magna ATCC 29328] gi|167831392|dbj|BAG08308.1| glycyl-tRNA synthetase [Finegoldia magna ATCC 29328] Length = 465 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 13/194 (6%) Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWL 228 G E+ L + + + + + M+ T Q + ++ Sbjct: 120 GLDGKSEQELLDIIEKEDIKCPECGKHNFTDIRKFNLMFKTFQGVTEDN----KSEIYLR 175 Query: 229 IPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS 288 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 176 PETAQGIFVNFKNVQRTSRKKVPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEF 231 Query: 289 ITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQN 345 + + + +E L L + + L +L F + T D E Sbjct: 232 FCKPGTDLEWFDYWRNFCKEFLLNLGIREENLRLRDHSQEELSFYSKATTDFEYLFPF-- 289 Query: 346 LYREISSCSTCGNF 359 + E+ + ++ Sbjct: 290 GWGELWGIADRTDY 303 >gi|145546444|ref|XP_001458905.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124426727|emb|CAK91508.1| unnamed protein product [Paramecium tetraurelia] Length = 844 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 4/91 (4%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNE 76 +KR + L ++N L +K++ ++ N +I + N + L N+ Sbjct: 203 EKRKYMQALDRFEDLKKQN--LDQKLQQLQNEINLLKQEISNLKNQKNDLNNQKSDLINQ 260 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 L L+ E E+ + KL I N Sbjct: 261 KKDLTTNNQKLQDEISELQQWIDKLNLDIKN 291 >gi|73962733|ref|XP_861771.1| PREDICTED: similar to bromodomain adjacent to zinc finger domain, 1A isoform b isoform 9 [Canis familiaris] Length = 1511 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 587 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 644 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + V ++ Sbjct: 645 EDEQRNSAADISVGEEEREDF 665 >gi|15606471|ref|NP_213851.1| DNA mismatch repair protein MutS [Aquifex aeolicus VF5] gi|3914080|sp|O67287|MUTS2_AQUAE RecName: Full=MutS2 protein gi|2983682|gb|AAC07247.1| DNA mismatch repair protein MutS [Aquifex aeolicus VF5] Length = 762 Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 4/56 (7%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E L+E + L K+ E++ R + +A +G + L ++ Sbjct: 529 EEFRKLEELRKELQKEKEEVEKLR----KEYEEAKRKGWKEAYKEAREYLRKLVQE 580 >gi|240256264|ref|NP_196285.5| ATP binding / microtubule motor [Arabidopsis thaliana] gi|332003665|gb|AED91048.1| kinesin heavy chain-like protein [Arabidopsis thaliana] Length = 986 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 11/112 (9%), Positives = 36/112 (32%), Gaps = 8/112 (7%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE------- 64 + + ++ R S + + E +I ++E +R ++ + S ++ Q Sbjct: 603 DQIIETMENREAHEDSFHEIETPETRIKMIDQMEILREQQKTLSEEMAQQSRSFKLLSEE 662 Query: 65 -GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + +K E L + + + + + + + + Sbjct: 663 AAKAPQNEEIKAEIINLNGDIKAKNDQIATLGKQILDFVIASHDELDKSDIV 714 >gi|227824508|ref|ZP_03989340.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21] gi|226905007|gb|EEH90925.1| prolyl-tRNA synthetase [Acidaminococcus sp. D21] Length = 571 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 5/54 (9%) Query: 364 MNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSVTIPTVLRPY 416 +++ + DP K F + GS G+ VGR L A++E Y +A+G++ P + PY Sbjct: 422 LHATFLDPEGKEKPF-YM--GSYGIGVGRTLAAVIEQYHDANGAIM-PKNIAPY 471 >gi|166365589|ref|YP_001657862.1| hypothetical protein MAE_28480 [Microcystis aeruginosa NIES-843] gi|166087962|dbj|BAG02670.1| hypothetical protein MAE_28480 [Microcystis aeruginosa NIES-843] Length = 205 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNS----NSAQIGQAIAEGN 66 + L + ++ Q + D R + +KI+ ++ N + Q + Sbjct: 66 IDSLQRDMDQKFDNLQRDMDQKFDSLQRDVDQKIDSLQKDVNQKFDSLQKDVNQ-KFDSL 124 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 V+ LK E + +K + L+++ + L+K Sbjct: 125 QKDVNDLKVEVTEIKGDIKTLDQKVETMDKRLEK 158 >gi|145545019|ref|XP_001458194.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124426013|emb|CAK90797.1| unnamed protein product [Paramecium tetraurelia] Length = 1492 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 32/113 (28%), Gaps = 3/113 (2%) Query: 10 NPEHLDIA--LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG-N 66 N + K + + I +L EKN+ L + +I Q + N Sbjct: 1247 NFKEFKEKYDQMKVQEKQVQDEIKNLQEKNKQLKQDNTRKDTNIKELKDKIDQLSNQKPN 1306 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + L + LKE++ ++ + + + Sbjct: 1307 DAEKQDLLQQVKKLKEEINRKDQAIKHFRQKFDEKSNEFEIYKNDYASKYAQT 1359 >gi|109081262|ref|XP_001093725.1| PREDICTED: GRINL1A complex locus protein 1 isoform 5 [Macaca mulatta] Length = 445 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIECMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|73962729|ref|XP_861716.1| PREDICTED: similar to bromodomain adjacent to zinc finger domain, 1A isoform b isoform 7 [Canis familiaris] Length = 1510 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 586 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 643 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + V ++ Sbjct: 644 EDEQRNSAADISVGEEEREDF 664 >gi|16330602|ref|NP_441330.1| hypothetical protein sll1424 [Synechocystis sp. PCC 6803] gi|1653094|dbj|BAA18010.1| sll1424 [Synechocystis sp. PCC 6803] Length = 491 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 38/91 (41%), Gaps = 14/91 (15%) Query: 7 IRQNPEHLDIALK--KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 +R+ + + + R+ + + + E++R L +++ ++ A R Sbjct: 109 VREEQQLVQERSRELNRNYTKALQLLRRVSEQSRNLRQEVANLSAERAQL---------- 158 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 D+L E+S L+ Q+ + ++E + Sbjct: 159 --NEQKDSLLAESSELQSQVKLRDQELSKRQ 187 >gi|67482183|ref|XP_656441.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|56473639|gb|EAL51055.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS] Length = 926 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 38/95 (40%), Gaps = 4/95 (4%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLD--EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 N + KKR++E + +D ++ L I++++ R N ++ + E + Sbjct: 347 NRATIAYNAKKRNIEGRISRQRMMDMKDERDKLRSTIKNLKKRYNKIERKV--LLNEESP 404 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 + LK + + ++ + + + + + Sbjct: 405 EKIADLKKRMTEIINEIKDTKDKYQNAQNGIHQYF 439 >gi|326433556|gb|EGD79126.1| hypothetical protein PTSG_09853 [Salpingoeca sp. ATCC 50818] Length = 459 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Query: 31 LSLDEK---NRILIKKIEDIRARRNSN-SAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 + LDE+ NRIL + + ++ +N+ S + GQ++ G+ E L+ + Sbjct: 74 IQLDEEKEENRILQNERDRLQREKNALASGRDGQSVDAGSDQDSQYYSEEIERLRSECKQ 133 Query: 87 LEKEEHEVCSSLKKLISCIPNV 108 + E +L+ + Sbjct: 134 TQLRLKECQLNLESSELVLEGY 155 >gi|313901202|ref|ZP_07834690.1| MutS2 family protein [Clostridium sp. HGF2] gi|312954160|gb|EFR35840.1| MutS2 family protein [Clostridium sp. HGF2] Length = 777 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 13/117 (11%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 +N E L R + R L +E + + +I + + E Sbjct: 526 ENYEL-KEKLAARLKDV------------RQLQADLEQEKKQLAQRREEILETVREDARK 572 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 +++ E + ++L + E S +K + + T Sbjct: 573 QLESSLEEAQDIIDELKHMHSEAKPHEISDRKARLKQLSSMDDAETDATPQKLPSYQ 629 >gi|229829876|ref|ZP_04455945.1| hypothetical protein GCWU000342_01982 [Shuttleworthia satelles DSM 14600] gi|229791174|gb|EEP27288.1| hypothetical protein GCWU000342_01982 [Shuttleworthia satelles DSM 14600] Length = 493 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + I ++++ + L K++ + +++ + + L++E +LKE+ Sbjct: 127 ELSKDDISKIEKEAKELQDKLDKLNCELKDKDK-----LSDKQKNKIKDLEDEIDSLKEK 181 Query: 84 LPILEKEEHEVCSSLKK 100 + + + K+ Sbjct: 182 MKKDKGNKDLSEDMKKE 198 >gi|242021385|ref|XP_002431125.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] gi|212516374|gb|EEB18387.1| structural maintenance of chromosome, putative [Pediculus humanus corporis] Length = 1206 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 45/117 (38%), Gaps = 17/117 (14%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE--- 64 R+N + L L+ + + + R K + + + +R++ S++ Q + E Sbjct: 246 RKNSNEVQNKLNN-ELKKSQDEVHKASQALRKAKKDVTEAKYQRDALSSEQAQLLKEKTK 304 Query: 65 -------------GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 G+ + ++E + LKEQ+ +K+ + +++ N Sbjct: 305 LELTIKDLTDEVSGDNKSKERAESELNKLKEQIDEKKKQLERIKPQYEEMKKKEENC 361 >gi|294659631|ref|XP_002770615.1| DEHA2G11220p [Debaryomyces hansenii CBS767] gi|199434113|emb|CAR65949.1| DEHA2G11220p [Debaryomyces hansenii] Length = 1047 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 11/89 (12%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILI-------KKIEDIRARRNSNSAQI---GQA 61 E + LK +++E ++ I D L + IE ++A ++Q+ G+ Sbjct: 482 EKFEKDLKAKNIEL-ADLIRERDRARLDLDRVKATKDQDIEKLQAELRELNSQVNESGKL 540 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKE 90 + S++ +NE LK+QL + +K+ Sbjct: 541 QSLNLSSIISKHQNEMDQLKKQLSVRDKD 569 >gi|169342965|ref|ZP_02863993.1| hypothetical protein CPC_0418 [Clostridium perfringens C str. JGS1495] gi|169298874|gb|EDS80948.1| hypothetical protein CPC_0418 [Clostridium perfringens C str. JGS1495] Length = 203 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 29 YILSL--DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 IL+L + + + + ++++ ++ N+ S ++ + L + A K E + + ++ Sbjct: 50 KILALKNNTELKSIQEEVDKLQNENNTLSKEV--EDKQKELDSLRAKKEEQAKIAQEESK 107 Query: 87 LEKEEHEVC 95 +E + Sbjct: 108 KSEENSKNK 116 >gi|294506684|ref|YP_003570742.1| hypothetical protein SRM_00869 [Salinibacter ruber M8] gi|294343012|emb|CBH23790.1| conserved hypothetical protein [Salinibacter ruber M8] Length = 398 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 16/58 (27%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP-QSEYILS--------LDEKNRILIKKIEDIRAR 50 LDI+ R+ D +L R +P + + L LD++ R L K+E++++R Sbjct: 6 LDIRK-RE----FDRSL--RGYDPQEVDAFLDMVAEQWEDLDDERRRLKNKVEELQSR 56 >gi|291402042|ref|XP_002717663.1| PREDICTED: CDC42 binding protein kinase alpha-like isoform 1 [Oryctolagus cuniculus] Length = 1732 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 42/116 (36%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDI---------------ALKKRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L +R L+ I + +++ + L ++ ED Sbjct: 487 LEIKNLKEEIEKLRKQVTESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIKTLQQERED 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|197692341|dbj|BAG70134.1| TRAF interacting protein [Homo sapiens] gi|197692599|dbj|BAG70263.1| TRAF interacting protein [Homo sapiens] Length = 469 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 50/141 (35%), Gaps = 31/141 (21%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNS----N 54 LD ++++ +++ L ++ D++ R I+ +R RN+ Sbjct: 74 LDAEFLKNELDNVRAQLSQK------------DKEKRDSQVIIDTLRDTLEERNATVVSL 121 Query: 55 SAQIGQA-------IAEGN-----LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 +G+A + + E L+ ++ +E+ E + S ++ Sbjct: 122 QQALGKAEMLCSTLKKQMKYLEQQQDETKQAQEEARRLRSKMKTMEQIELLLQSQRPEVE 181 Query: 103 SCIPNVPLEEVPIGTSANENI 123 I ++ + + + A + Sbjct: 182 EMIRDMGVGQSAVEQLAVYCV 202 >gi|164688605|ref|ZP_02212633.1| hypothetical protein CLOBAR_02250 [Clostridium bartlettii DSM 16795] gi|164603018|gb|EDQ96483.1| hypothetical protein CLOBAR_02250 [Clostridium bartlettii DSM 16795] Length = 558 Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 5/76 (6%) Query: 13 HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 ++ R + IL+ DEK L ++E + + + ++ +A + + L D Sbjct: 327 EYRQKIQNR-----LDEILNRDEKVVALKAELEKLESVLYDKAKEVSKARKKVAVDLQDV 381 Query: 73 LKNETSTLKEQLPILE 88 L E +L + + E Sbjct: 382 LIEELHSLNMKNVVFE 397 >gi|326478159|gb|EGE02169.1| dynactin [Trichophyton equinum CBS 127.97] Length = 1351 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 5/102 (4%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED---IRARRNSNSAQIGQAIAE 64 R E + L+++ +PQ + I +L ++ + ++E+ ++A S ++ E Sbjct: 337 RDKFETIIQKLREK-YQPQQQEITTLRKQLKEAEYRVEEVERLQAEHESI-LEMAALDRE 394 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + +++K E LK + LE E + +L + Sbjct: 395 MAEEVAESIKAEYEALKIRTEELELEVEVLKEENDQLGQVMS 436 >gi|291234782|ref|XP_002737320.1| PREDICTED: viral A-type inclusion protein-like [Saccoglossus kowalevskii] Length = 4349 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 18 LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNET 77 L+KR + + + ILS D+ N L +I+ +R RN + ++ + + L+ + Sbjct: 1660 LRKRAEDLE-DTILSADDSNSTLQTQIQTLREERNE-----SFSKSKQLDANLQELQQQL 1713 Query: 78 STLKEQLPILEKEEHEVCSSLKK 100 + ++++L + + E + L+K Sbjct: 1714 TMVQKELSVAQNEISSLQKILQK 1736 >gi|118474688|ref|YP_892209.1| hypothetical protein CFF8240_1045 [Campylobacter fetus subsp. fetus 82-40] gi|118413914|gb|ABK82334.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus 82-40] Length = 237 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 11/97 (11%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRAR-RNSNS---------AQIGQAIAEGNLS- 68 ++L + E ILS+DEK + +IE+++++ N+NS IG+ Sbjct: 29 NKNLNVKKEEILSIDEKVETIQTEIEELKSQISNTNSHIVEFGAKIKDIGKKSGSVKTEK 88 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCI 105 + AL E K+QL +E + ++ ++ Sbjct: 89 EIKALNLEEDLAKDQLEAANEEITRLERIIESKLNYE 125 >gi|322495061|emb|CBZ30364.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 869 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 62/192 (32%), Gaps = 25/192 (13%) Query: 4 IQWIRQNPEHLDIAL---KKR-----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 ++ I++N E L +L ++R E S++ D++ R L + E +R R Sbjct: 86 MKLIQEN-EELRQSLTEAERRMREISGRERDSDH--DADKRIRELQSECERMRKER---- 138 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +++ ++ L+++L E+ + E + Sbjct: 139 --------LREYKELESTRHLCVDLQKRLDEDEETLKSAKELWDQERDRYQQKIDELLDF 190 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLE 175 A ++ RS + E F + E + +R K + E Sbjct: 191 NKRAERPLVTRSARHRDGCADEPLEQFLLKEEVAQ--LERTLKEVQHKNWEKEKTWVRTE 248 Query: 176 RALGQFMIDLHT 187 L + +L Sbjct: 249 TELRHRINELQV 260 >gi|313237175|emb|CBY12394.1| unnamed protein product [Oikopleura dioica] Length = 2447 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 11/114 (9%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARR----NSNSA 56 IQ +R+ + L + +R + + I L E+NR L KK++D+R + S Sbjct: 1496 IQDLRREKDELVSMIGQRSSDQNLKFTQKIEKLREENRDLQKKLDDVRKESRLEAKTLSE 1555 Query: 57 Q--IGQAIAEGN--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 I Q + E L + LK + LK Q+ + S+ + Sbjct: 1556 ASNIKQVLREKQHYQELSEDLKVDIQKLKNQMNEKTRYHSTSSSNNELTRMLEK 1609 >gi|291402044|ref|XP_002717664.1| PREDICTED: CDC42 binding protein kinase alpha-like isoform 2 [Oryctolagus cuniculus] Length = 1719 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 42/116 (36%), Gaps = 17/116 (14%) Query: 2 LDIQWIRQNPEHLDI---------------ALKKRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E L +R L+ I + +++ + L ++ ED Sbjct: 487 LEIKNLKEEIEKLRKQVTESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIKTLQQERED 546 Query: 47 IRARRNSNSAQIGQAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S ++ E + E + E+L L ++ ++ ++ Sbjct: 547 LNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRD 602 >gi|123503178|ref|XP_001328459.1| hypothetical protein [Trichomonas vaginalis G3] gi|121911402|gb|EAY16236.1| hypothetical protein TVAG_341300 [Trichomonas vaginalis G3] Length = 446 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 64/210 (30%), Gaps = 17/210 (8%) Query: 3 DIQWIR-QNPEHLD--IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 D I+ +N + + +R+ I L+E+N L + +E++ S +I Sbjct: 60 DQNEIKNENQNEIQTIRSQLERNES----EIAKLNEENIKLRQNLENLE------SKEIL 109 Query: 60 QAIAE-GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 IAE N S ++A+ L ++ + + S ++ + G Sbjct: 110 SKIAEFKNSSDIEAVYEFLDELAQKGYQQLMSKACEEGLWETDDSRSQSILHKASIEGNL 169 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 LI G + EA F+ L ++ T + L Sbjct: 170 RLVKSLIEC-GCDKEIKKYRLGFTPLFEAARQSHFEIVKYLISVGANIETKDSSK-RTLL 227 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 + Y + + M G Sbjct: 228 HNASYGGNLDIVKYLVSIGADI-NAKDMDG 256 >gi|115494964|ref|NP_001069426.1| alpha-internexin [Bos taurus] gi|122132263|sp|Q08DH7|AINX_BOVIN RecName: Full=Alpha-internexin; Short=Alpha-Inx gi|115304927|gb|AAI23744.1| Internexin neuronal intermediate filament protein, alpha [Bos taurus] gi|296472698|gb|DAA14813.1| alpha-internexin [Bos taurus] Length = 499 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 146 ELRDLRAQLEEASSA 160 >gi|73945734|ref|XP_862404.1| PREDICTED: similar to villin 2 isoform 4 [Canis familiaris] Length = 592 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 35/91 (38%), Gaps = 2/91 (2%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGNLSLVDALKNETSTL 80 L Q + L L+E+ + ++ E + A R + + + + A + + L E + Sbjct: 371 LSDQIQRALQLEEERKRAQEEAERLEADRVAALRAKEELERQAADQIKSQEQLAAELAEY 430 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 ++ +LE+ +++ + Sbjct: 431 TAKIALLEEARRRKEDEVEEWQHRAKEAQDD 461 >gi|332008312|gb|AED95695.1| structural maintenance of chromosomes protein 4 [Arabidopsis thaliana] Length = 1244 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 2/82 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAIAEGNLSLVDALKNETS 78 R + L+ + ++IE + + N Q+ +A ++ +D LK Sbjct: 747 RQYRAAENEVSGLEMELAKSQREIESLNSEHNYLEKQLASLEAASQPKTDEIDRLKELKK 806 Query: 79 TLKEQLPILEKEEHEVCSSLKK 100 + ++ +E E K Sbjct: 807 IISKEEKEIENLEKGSKQLKDK 828 >gi|289578298|ref|YP_003476925.1| DNA repair protein RecN [Thermoanaerobacter italicus Ab9] gi|289528011|gb|ADD02363.1| DNA repair protein RecN [Thermoanaerobacter italicus Ab9] Length = 566 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEE 91 DE+ + L +K +++ N +I + ++ LK + ++ +E+E Sbjct: 154 DEEFKALREKFKELLKEYNRIQKEISSFFKDEKEKNETIELLKYQIEEIERANLSVEEES 213 Query: 92 HEVCSSL 98 + Sbjct: 214 QLLEKRN 220 >gi|190405081|gb|EDV08348.1| ubiquitin ligase protein BRE1 [Saccharomyces cerevisiae RM11-1a] gi|207346970|gb|EDZ73301.1| YDL074Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 700 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 10/96 (10%) Query: 28 EYILSLDEKNRI--------LIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNET 77 + ++ +++ + L K D+RA NS S+ I I GN + ++E Sbjct: 236 DELVQAEDERKEDAENEKLELDLKFSDLRAEINSLSSTIKDLENIRRGNEEELIKTRSEV 295 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 S LK+Q ++ + S + + E+ Sbjct: 296 SNLKKQQIAAADQDPDFKSYDHESLLAKIQHLTEQN 331 >gi|170594575|ref|XP_001902039.1| Viral A-type inclusion protein repeat containing protein [Brugia malayi] gi|158590983|gb|EDP29598.1| Viral A-type inclusion protein repeat containing protein [Brugia malayi] Length = 1051 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNETST 79 +E +L ++++ R + +++E ++ ++ +IG+ ++ NE + Sbjct: 146 GKALATERMLEMEKETRGMSRQVEQLKQEKSRLIEKIGELLTKIASKTDEIEEKNNEKAL 205 Query: 80 LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 L ++L +E + ++ L + P E+ Sbjct: 206 LGDELVRYREEIQNLELEIEDLRRKLDQRPSEDD 239 >gi|157310135|emb|CAJ31809.1| 101 kDa heat shock protein [Aegilops umbellulata] Length = 563 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 13/92 (14%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 44 IDLVDEACANVRVQLDGQPEEIDNLERKRIQLEVELHALEKEKDKASK-----------A 92 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ E L+++L L+ + + + + Sbjct: 93 RLVDVRKELDDLRDKLQPLQMKYRKEKERIDE 124 >gi|151941928|gb|EDN60284.1| E3 ubiquitin ligase for Rad6p [Saccharomyces cerevisiae YJM789] Length = 700 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 10/96 (10%) Query: 28 EYILSLDEKNRI--------LIKKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNET 77 + ++ +++ + L K D+RA NS S+ I I GN + ++E Sbjct: 236 DELVQAEDERKEDAENEKLELDLKFSDLRAEINSLSSTIKDLENIRRGNEEELIKTRSEV 295 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 S LK+Q ++ + S + + E+ Sbjct: 296 SNLKKQQIAAADQDPDFKSYDHESLLAKIQHLTEQN 331 >gi|114644578|ref|XP_522390.2| PREDICTED: keratin, type II cuticular Hb2 [Pan troglodytes] Length = 513 Score = 37.4 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L ++ E+++A+R I +A +G +L DA K Sbjct: 327 DNLRNRK-----NEILEMNKLIQWLQQETENVKAQRCKLEGAIAEAEQQGEAALNDA-KC 380 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 381 KLAGLEEALQKAKQDMACLLKEYQEVM 407 >gi|331268585|ref|YP_004395077.1| exonuclease [Clostridium botulinum BKT015925] gi|329125135|gb|AEB75080.1| exonuclease, putative [Clostridium botulinum BKT015925] Length = 1176 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 2/78 (2%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ IR N E ++ L + +S+ L+++ + I + + I Sbjct: 932 IKNIRNNLERIEEKLN--GDKIESDKWEELNKRKEEIENIIANNLKEVATLQKVIEDLKK 989 Query: 64 EGNLSLVDALKNETSTLK 81 + + + K + K Sbjct: 990 DLDNLKILRTKEKELEHK 1007 >gi|322702534|gb|EFY94174.1| GDP/GTP exchange factor Sec2p, putative [Metarhizium anisopliae ARSEF 23] Length = 684 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Query: 19 KKRHLEPQSEYILSL--DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 +KR +E + E + + +E N+++I E+ +A+ ++ +I Q A+ S LK++ Sbjct: 211 EKRKIEQELENLTTALFEEANKMVIGAKEEAQAQHDALQRKIDQLKAQLADSEG-LLKSQ 269 Query: 77 TSTLKEQLPILEKEEHEVCSSLK 99 L E ++E E Sbjct: 270 QEQLSELKSVMETMASEHEEQTN 292 >gi|297663194|ref|XP_002810064.1| PREDICTED: nestin-like [Pongo abelii] Length = 1632 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 24/94 (25%) Query: 12 EHLDIALKK-----------------RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN 54 E + +LK R LE E + SL+++N+ L+K +E +R Sbjct: 551 EEIQESLKTLENQSHETLERENQECPRSLEEDLETLKSLEKENKELLKDVEVVR----PL 606 Query: 55 SAQ-IGQAIAEGNLS--LVDALKNETSTLKEQLP 85 + +GQ G + +L+ E L + L Sbjct: 607 EKEAVGQLKPIGKEDTQTLQSLQKENQELMKSLE 640 >gi|291522069|emb|CBK80362.1| Predicted permease [Coprococcus catus GD/7] Length = 1210 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 +P I LD + + +++ + A++N+ + I Q +G L ++A ++ ++ KE Sbjct: 451 EKPDEALIAQLDAQIAAVQEQLTQLDAQKNALAEGISQV--DGGLDQIEAGLSQIASGKE 508 Query: 83 QLPILEKEEHEVCSSLKKLISCI 105 +L ++E + + L + + + Sbjct: 509 ELNKQQEELNSQQAKLDETFNQL 531 >gi|10178123|dbj|BAB11416.1| kinesin heavy chain-like protein [Arabidopsis thaliana] Length = 997 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 11/112 (9%), Positives = 36/112 (32%), Gaps = 8/112 (7%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE------- 64 + + ++ R S + + E +I ++E +R ++ + S ++ Q Sbjct: 613 DQIIETMENREAHEDSFHEIETPETRIKMIDQMEILREQQKTLSEEMAQQSRSFKLLSEE 672 Query: 65 -GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + +K E L + + + + + + + + Sbjct: 673 AAKAPQNEEIKAEIINLNGDIKAKNDQIATLGKQILDFVIASHDELDKSDIV 724 >gi|57107579|ref|XP_543999.1| PREDICTED: similar to internexin neuronal intermediate filament protein, alpha isoform 1 [Canis familiaris] Length = 500 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 146 ELRDLRAQLEEASSA 160 >gi|319400901|gb|EFV89120.1| glycyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 463 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 9/135 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A E L L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASEWLTDLNISEDNMRLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNFQSR 362 E+ ++ ++ R Sbjct: 289 GELWGIASRTDYDLR 303 >gi|313665178|ref|YP_004047049.1| lipoprotein, PARCEL family [Mycoplasma leachii PG50] gi|312949531|gb|ADR24127.1| putative lipoprotein, PARCEL family [Mycoplasma leachii PG50] Length = 761 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 11/100 (11%) Query: 4 IQWIRQNPEHLDIAL--KKRHLEPQSEYILSLDEKNRIL-----IKKIEDIRARRNSNS- 55 I + + + + L + I SL+ + + L + E + ++ Sbjct: 129 ISLLTKQIKEVKQNLSDATTQKNINIKEIKSLELQVKELKEKTHQVEKEILESKSKKEEL 188 Query: 56 ---AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEH 92 +I + + +D LKNE + L Q LEK+ Sbjct: 189 IKLKEISKLEFKKTKDTLDELKNEKANLDIQKTNLEKQIQ 228 >gi|301758615|ref|XP_002915166.1| PREDICTED: LOW QUALITY PROTEIN: ezrin-like [Ailuropoda melanoleuca] Length = 788 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 36/95 (37%), Gaps = 2/95 (2%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGNLSLVDALKNE 76 ++ L Q + L L+E+ + ++ E + R + + + + A + + L E Sbjct: 565 AEKELSDQIQRALQLEEERKRAQEEAERLENDRVAALRAKEELERQAADQIKSQEQLAAE 624 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + ++ +LE+ +++ + Sbjct: 625 LAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDD 659 >gi|297676678|ref|XP_002816265.1| PREDICTED: 60S ribosomal protein L26-like 1-like [Pongo abelii] Length = 141 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L LD+ + ++ R + S Q+G+ + L++ ++ Sbjct: 105 LKLDKDRKKIL--------ERKAKSRQVGKEKGKYKEELIEKMQE 141 >gi|302664936|ref|XP_003024092.1| hypothetical protein TRV_01761 [Trichophyton verrucosum HKI 0517] gi|291188122|gb|EFE43474.1| hypothetical protein TRV_01761 [Trichophyton verrucosum HKI 0517] Length = 1360 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 5/102 (4%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED---IRARRNSNSAQIGQAIAE 64 R E + L+++ +PQ + I +L ++ + ++E+ ++A S ++ E Sbjct: 337 RDKFETIIQKLREK-YQPQQQEITTLRKQLKEAEYRVEEVERLQAEHESI-LEMAALDRE 394 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + +++K E LK + LE E + +L + Sbjct: 395 MAEEVAESIKAEYEALKIRTEELELEVEVLKEENDQLGQVMS 436 >gi|224124220|ref|XP_002319275.1| cc-nbs-lrr resistance protein [Populus trichocarpa] gi|222857651|gb|EEE95198.1| cc-nbs-lrr resistance protein [Populus trichocarpa] Length = 991 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 4/96 (4%) Query: 26 QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL--KNETSTLKE- 82 + ++SL + L +I+ + +R+N I AI EG AL ++ Sbjct: 22 KISTLVSLHGNMKSLQSEIQKLISRKNELEEDIRLAITEGKNPTSQALNWIKRVEEIEHD 81 Query: 83 -QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 QL + + VC S + Sbjct: 82 VQLMMEDAGNSCVCGSNLDCCMHSGLRLRKTAKKKC 117 >gi|163791250|ref|ZP_02185665.1| peptidase, M48 family protein [Carnobacterium sp. AT7] gi|159873454|gb|EDP67543.1| peptidase, M48 family protein [Carnobacterium sp. AT7] Length = 442 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 42/102 (41%), Gaps = 14/102 (13%) Query: 9 QNPEHLDIALKKRHLEPQS------EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ E L+ + + S E + +L+ + L ++E ++ ++ + + Sbjct: 31 EDLESQKAELENKSNDLNSKIQSQEETLNNLESEKANLESEVEKLQTDIDAV---VLELK 87 Query: 63 AEGNL-----SLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 A+ + ++ LK E LK+ + E++ S++ Sbjct: 88 AQEQKLADSKAKIEKLKVEIEKLKDLIAKREEKLEHQARSVQ 129 >gi|145502299|ref|XP_001437128.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124404276|emb|CAK69731.1| unnamed protein product [Paramecium tetraurelia] Length = 219 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 5/58 (8%) Query: 6 WIRQNPEHLDIALKKR-----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +I+ N L +KR HL+ + + I+ + E+ + L +++E +++++NS QI Sbjct: 83 FIKGNKSSLSKVERKRRQSIAHLDKEKDSIIIMREEMKQLKEELETLQSQQNSILKQI 140 >gi|110803546|ref|YP_698583.1| hypothetical protein CPR_1261 [Clostridium perfringens SM101] gi|110684047|gb|ABG87417.1| conserved hypothetical protein [Clostridium perfringens SM101] Length = 327 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 8/105 (7%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 N E + K E I L +K + +IE ++ + + IG+ E Sbjct: 93 NEFLNNIEEVSTKSK--------ENIYHLKDKAKETYDEIERLKEQVEGINKNIGELSKE 144 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + + L+ L E++ E ++++ + Sbjct: 145 EGIENIATLQRIGRELSEKIRTSNHIAKEHIEKIEEMDKMLKGEC 189 >gi|30025501|gb|AAP04414.1| KIF27B [Homo sapiens] Length = 1335 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Query: 9 QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 ++ + LK+R +++ LDE+ + L +++E + +R + Sbjct: 832 EDLDAC--NLKRRKGSFGSIDHLQKLDEQKKWLDEEVEKVLNQRQELEELEADLKKREAI 889 Query: 68 -SLVDALKNETSTLKEQ 83 S +AL E S L+ + Sbjct: 890 VSKKEALLQEKSHLENK 906 >gi|327299274|ref|XP_003234330.1| dynactin [Trichophyton rubrum CBS 118892] gi|326463224|gb|EGD88677.1| dynactin [Trichophyton rubrum CBS 118892] Length = 1360 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 5/102 (4%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED---IRARRNSNSAQIGQAIAE 64 R E + L+++ +PQ + I +L ++ + ++E+ ++A S ++ E Sbjct: 337 RDKFETIIQKLREK-YQPQQQEITTLRKQLKEAEYRVEEVERLQAEHESI-LEMAALDRE 394 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + +++K E LK + LE E + +L + Sbjct: 395 MAEEVAESIKAEYEALKIRTEELELEVEVLKEENDQLGQVMS 436 >gi|294783689|ref|ZP_06749013.1| HDIG/KH domain protein [Fusobacterium sp. 1_1_41FAA] gi|294480567|gb|EFG28344.1| HDIG/KH domain protein [Fusobacterium sp. 1_1_41FAA] Length = 521 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 36/105 (34%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 ++ R +E ++ +++ + +E+ S + +I E + + + Sbjct: 22 FKKSVIDRQIEKLNDLEDEVEKAKLKAKEIVEEAEKDAGSKAKEIELKAKEKAYQIKEEV 81 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + E LK ++ E + L I N LE I Sbjct: 82 EKEARNLKNEIAQKEARIVKKEEILDGKIEKAENKSLELEKINNE 126 >gi|281338236|gb|EFB13820.1| hypothetical protein PANDA_001081 [Ailuropoda melanoleuca] Length = 1039 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 49/160 (30%), Gaps = 17/160 (10%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 IR E LK E + +L+ EK + K+IE++ + Q Q G+ Sbjct: 405 IR--AEVFRKKLK----EQREAELLTSAEKRAEMQKQIEEMEKKLKEI--QTTQRERTGD 456 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 ET+ L+ L E + P+ TS ENI Sbjct: 457 QQEEKMTTKETAELQIALESQEIPG---------MALSNSVCPVNSCARETSLAENIWQE 507 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 K PS + F + E ++ R Sbjct: 508 PHSKGPSIPFSIFDEFLLSEKKNTSRPADPPRVLSQRRPF 547 >gi|281202408|gb|EFA76611.1| formin domain-containing protein [Polysphondylium pallidum PN500] Length = 1840 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 51/149 (34%), Gaps = 4/149 (2%) Query: 36 KNRILIKKIEDIRARRNSNSAQI-GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 + R +I +I ++++ ++ Q+ A G + ++ +K+ ST ++QL + ++V Sbjct: 1052 QWREMISQITELKSEMTVVQKEVESQSKANGTDAFINKMKSFVSTKQQQLDGVSIYINQV 1111 Query: 95 CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEI-GEALGLMDF 153 K + + P N I K +E+ ++ Sbjct: 1112 EDVFKNSMKYFLEDC--QTPEEFFIMLNNFIGMFTKAHRDNEREKENLKLKNNKTKTAQP 1169 Query: 154 DRATKLSGARFSVLTGHLAHLERALGQFM 182 + +S + V E + Sbjct: 1170 KKHPTVSTNKTVVANNTPPAKEDSSENIN 1198 >gi|297544578|ref|YP_003676880.1| DNA repair protein RecN [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842353|gb|ADH60869.1| DNA repair protein RecN [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 566 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEE 91 DE+ + L +K +++ N +I + ++ LK + ++ +E+E Sbjct: 154 DEEFKALREKFKELLKEYNRIQKEISSFFKDEKEKNETIELLKYQIEEIERATLSVEEES 213 Query: 92 HEVCSSL 98 + Sbjct: 214 QLLEKRN 220 >gi|225552527|ref|ZP_03773466.1| conserved hypothetical protein [Borrelia sp. SV1] gi|225370855|gb|EEH00286.1| conserved hypothetical protein [Borrelia sp. SV1] Length = 188 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 34/69 (49%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 +I KIE++R + +S S + + A+G +++LK E + L ++ I E E + C Sbjct: 109 SMISKIENLRFKIDSLSKECNKQNAKGVNENINSLKVELNELIKECSIREMELYYECMKR 168 Query: 99 KKLISCIPN 107 + + Sbjct: 169 LAAAHEVDS 177 >gi|194246549|ref|YP_002004188.1| hypothetical protein ATP_00148 [Candidatus Phytoplasma mali] gi|193806906|emb|CAP18335.1| hypothetical protein ATP_00148 [Candidatus Phytoplasma mali] Length = 202 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 14/122 (11%) Query: 6 WIRQNPEHLDIALKKRHLEPQSEYILS------LDEKNRILIKKIEDIRARRNSNSAQIG 59 +I++NP A++K + IL L +K L K I ++ + S QI Sbjct: 26 FIKKNPIFFIKAIEK------IDQILETVGNATLQDKKTALYKDINELENEKKSLEKQIE 79 Query: 60 QAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +D L+ K L + + + K+ P Sbjct: 80 AIDKRFNKQQEKIDVLQQAIDQKKLSLKNINNQTQNESKNDKQKKITEPTKHSNTEEQHP 139 Query: 118 SA 119 ++ Sbjct: 140 TS 141 >gi|168056456|ref|XP_001780236.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668386|gb|EDQ54995.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1019 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 3 DIQWI---RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRAR---RNSNSA 56 D++ I + E + LK + + + + + L ++ + L++K E+++ + Sbjct: 164 DLKKIETSLKQRESVLANLKANNADLEKD-VRRL-QERKSLLEKAENLKKKLPWLKYEQK 221 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A+ L NE + +L +E + S ++ I + Sbjct: 222 KALLLEAKDKERNAKRLLNEAAETTNRLKKPAEEWRKKRSDIESTIRKLQQQHD 275 >gi|159905659|ref|YP_001549321.1| chromosome segregation protein SMC [Methanococcus maripaludis C6] gi|159887152|gb|ABX02089.1| chromosome segregation protein SMC [Methanococcus maripaludis C6] Length = 1189 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 53/159 (33%), Gaps = 16/159 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNR------ILIKKIEDIRARRNSNSAQIGQAI 62 +N E LK + E +++ L ++ + ++ +++ NS +I + Sbjct: 380 ENLEVEKKKLKSKVEESETQTELLKQQERKISERINESQNELYNLKNEFNSLENEINKKS 439 Query: 63 AE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 N ++ L+ E + +K + + E+ +L V + Sbjct: 440 FNLTKNKETIETLQKELNDIKAESEDTKVLYKELEDVAVELEYSKKKVI--------TLL 491 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 E+ S +E+ +I + DF + Sbjct: 492 EDKKEYQEKLDKSHADYIKENAKIKAMKDMEDFSLDRAV 530 >gi|156937997|ref|YP_001435793.1| hypothetical protein Igni_1210 [Ignicoccus hospitalis KIN4/I] gi|156566981|gb|ABU82386.1| hypothetical protein Igni_1210 [Ignicoccus hospitalis KIN4/I] Length = 294 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 I L ++ LI KI+++RA+R + + + L+ E + L E+L L+ Sbjct: 16 EIEELRKERAELITKIKELRAQRKAL-----IEKKRAEVERLRELRAERAKLVEELRQLK 70 Query: 89 KEEHEVCSSLKK 100 + E L + Sbjct: 71 ESRREAKQKLNQ 82 >gi|146423067|ref|XP_001487466.1| hypothetical protein PGUG_00843 [Meyerozyma guilliermondii ATCC 6260] Length = 485 Score = 37.4 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 17/161 (10%), Positives = 55/161 (34%), Gaps = 10/161 (6%) Query: 4 IQWIRQNPEHLDIA-----LKKRHLEPQSEYILSLDEKNRILIKKIEDI---RARRNSNS 55 I+ +R N A + R++ E +++ + L K +E++ AR+N + Sbjct: 295 IEDLRSNLNEYQQAASSQEQRNRNINISIEAFQIIEQNIKNLFKILEEVSNDLARQNRIA 354 Query: 56 AQIGQA--IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 ++ + + E + L+ ++ + E++ ++ + Sbjct: 355 EELNKHQDMLEEKKQESHEYGRQILALQRKINVNEEKTQKLREGFNRETERQQQETATLR 414 Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFD 154 +++ + + + ++R I + + Sbjct: 415 QEYEKLSQDRATKEEELERTRKEINRYEHMINSEKNEFNIE 455 >gi|327279248|ref|XP_003224369.1| PREDICTED: RB1-inducible coiled-coil protein 1-like [Anolis carolinensis] Length = 1483 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 49/132 (37%), Gaps = 29/132 (21%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQS------EYILSLDEKN-RILI--------KKIEDIR 48 I+ +R++ + + +LKK + E E +L++ + + L +++E++ Sbjct: 953 IKELRESRDRVSESLKKLNFENDEKMQVLQEEFQTLEKDHLKELESNLVVRHTQELEELM 1012 Query: 49 ARRN----SNSAQ----IGQAIAE------GNLSLVDALKNETSTLKEQLPILEKEEHEV 94 A+ N + + Q V+ LK + S L + LE E Sbjct: 1013 AKHNDTLEKLKKENRHRVEQMQKSHATDVHAKEQQVEELKAKVSELSDLRCKLEVELALK 1072 Query: 95 CSSLKKLISCIP 106 + ++ + Sbjct: 1073 EAETDEMKLLVE 1084 >gi|325116138|emb|CBZ51692.1| hypothetical protein NCLIV_014870 [Neospora caninum Liverpool] Length = 1386 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 86/235 (36%), Gaps = 9/235 (3%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L +R + ++ + + D++ + K+ + ++ Q+G +A+ + V+ L+ Sbjct: 896 QKLTERAVNAET-ALDATDKQLKEASKERDGLKKETEDMKKQMG--VAQLIAAEVETLRV 952 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 ET K +L LE+ + KK + I ++ ++ + + ++ Sbjct: 953 ETKDQKAKLVELEESYKQEKFLRKKYYNEIEDM-KGKIRVYCRVRPMAKYEIEKQCKQSV 1011 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 + + + D + + +R + + + Y + Sbjct: 1012 F-PVDEYSVKVLTSKGDKEFMYDRTFPPECTQEEVYEDTKRLIQSVIDGFNVCIFAYGQT 1070 Query: 196 SAPLLVRDEAMYGT-GQIPKFADDMFCTTDGR---WLIPTSEVSLTNLYSHEIIE 246 + + G G P+ +D+F T + +EV + LY++++I+ Sbjct: 1071 GSGKTFTIQGGAGNPGIAPRAINDLFDTLNSFEKGKFKYEAEVYMCELYNNQLID 1125 >gi|301754916|ref|XP_002913273.1| PREDICTED: mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like [Ailuropoda melanoleuca] Length = 1062 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 49/160 (30%), Gaps = 17/160 (10%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 IR E LK E + +L+ EK + K+IE++ + Q Q G+ Sbjct: 416 IR--AEVFRKKLK----EQREAELLTSAEKRAEMQKQIEEMEKKLKEI--QTTQRERTGD 467 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 ET+ L+ L E + P+ TS ENI Sbjct: 468 QQEEKMTTKETAELQIALESQEIPG---------MALSNSVCPVNSCARETSLAENIWQE 518 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 K PS + F + E ++ R Sbjct: 519 PHSKGPSIPFSIFDEFLLSEKKNTSRPADPPRVLSQRRPF 558 >gi|289168051|ref|YP_003446320.1| chromosome condensation and segregation SMC protein [Streptococcus mitis B6] gi|288907618|emb|CBJ22455.1| chromosome condensation and segregation SMC protein [Streptococcus mitis B6] Length = 1179 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 40/112 (35%), Gaps = 12/112 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYI----------LSLDEKNRILIKKIEDIRARRNSNSAQI 58 +P+ + L++R + E L+ ++ K+ + ++ + + Sbjct: 372 DDPDQMIELLRERFVALLQEEADVSNQLTRIENELENSRQLSQKQADQLQKLKEQLAT-- 429 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 + A + ++ K + L + KE+ E SS + S + + Sbjct: 430 AKEKASQQKAELETAKEQVQKLLADYQAIAKEQEEQKSSYQAQQSQLFDRLD 481 >gi|218247610|ref|YP_002372981.1| hypothetical protein PCC8801_2826 [Cyanothece sp. PCC 8801] gi|257061057|ref|YP_003138945.1| hypothetical protein Cyan8802_3273 [Cyanothece sp. PCC 8802] gi|218168088|gb|ACK66825.1| conserved hypothetical protein [Cyanothece sp. PCC 8801] gi|256591223|gb|ACV02110.1| hypothetical protein Cyan8802_3273 [Cyanothece sp. PCC 8802] Length = 380 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSN----SAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 + SL+++ + LI +IE+++AR+N + +I QAI+ + L+ + L+ + Sbjct: 64 QVQSLEQQKQTLIIEIEELKARKNQVISEQTQEIQQAISLMVKEGLKELEQQKQALEIAI 123 Query: 85 P 85 Sbjct: 124 E 124 >gi|313631994|gb|EFR99112.1| M48 family peptidase [Listeria seeligeri FSL N1-067] gi|313636348|gb|EFS02131.1| M48 family peptidase [Listeria seeligeri FSL S4-171] Length = 441 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 5/99 (5%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 RQN + ++L+ +S I L+ + K++E + + + + A+ + Sbjct: 33 RQNEIEQKKSEVNKNLDTKSSEIADLENDEKNASKQLESLLKSIDETNK---KLKAQEDK 89 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + + LK+ + L + E L I Sbjct: 90 VESEN--KKLKQLKKDIEKLRNDIKERQEVLDNRARAIQ 126 >gi|291001337|ref|XP_002683235.1| predicted protein [Naegleria gruberi] gi|284096864|gb|EFC50491.1| predicted protein [Naegleria gruberi] Length = 518 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 12/83 (14%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRAR-------RNSNSAQIGQAIAEGNLSLVDA 72 K+ L+ + ++ +D+ N L+K+ + ++ + RN + I + + + Sbjct: 285 KKELDNSTAQVIKVDQLNHELMKENQKLKIQFAAQEDDRNYLAKHIAKTKRDN-----EK 339 Query: 73 LKNETSTLKEQLPILEKEEHEVC 95 LK ET L+E+L E+ Sbjct: 340 LKEETKRLQEELQRCNNIIKEMQ 362 >gi|251810982|ref|ZP_04825455.1| glycyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|282876009|ref|ZP_06284876.1| glycine--tRNA ligase [Staphylococcus epidermidis SK135] gi|251805492|gb|EES58149.1| glycyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|281295034|gb|EFA87561.1| glycine--tRNA ligase [Staphylococcus epidermidis SK135] Length = 463 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 9/135 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A E L L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASEWLTDLNISEDNMRLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNFQSR 362 E+ ++ ++ R Sbjct: 289 GELWGIASRTDYDLR 303 >gi|269124218|ref|YP_003306795.1| YadA domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268315544|gb|ACZ01918.1| YadA domain protein [Streptobacillus moniliformis DSM 12112] Length = 1065 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 35/88 (39%), Gaps = 1/88 (1%) Query: 28 EYILSLDE-KNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 + + D+ K L ++IE ++A + + I + S + KN+ + L +++ Sbjct: 252 DKLEKADKSKYTKLKEEIEKLKAEKGTLDKDAKDIIDKAYNSRTEDEKNKLTELNKKITS 311 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVP 114 E ++ K+++ E Sbjct: 312 KITEINQKYGEYYKIVNVWEATYGEVSI 339 >gi|218197115|gb|EEC79542.1| hypothetical protein OsI_20656 [Oryza sativa Indica Group] Length = 913 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 37/103 (35%), Gaps = 12/103 (11%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L + + ++ S + + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVEHHALEKEKDKASKARLVEVKKELDD 453 Query: 69 LVDAL----------KNETSTLKEQLPILEKEEHEVCSSLKKL 101 L D L K +++ E+ + + + +++ Sbjct: 454 LRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFTLQEAERRM 496 >gi|62859465|ref|NP_001016088.1| cancer susceptibility candidate 4 [Xenopus (Silurana) tropicalis] Length = 259 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 16/100 (16%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKK------------IEDIRARRNSNSAQIG 59 E L+KR+ SE IL D R + +K DI+A+R Sbjct: 57 EVARSRLEKRN----SELILQADTHRRQMEQKQGEYQGLGERLQARDIQAQRCELEKTKL 112 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 Q ++ + LK + + L+ + E + HE ++ Sbjct: 113 QNNVSLQMADISRLKEQLAELRHEFLRQEDQLHEYKNNNT 152 >gi|73962721|ref|XP_861595.1| PREDICTED: similar to bromodomain adjacent to zinc finger domain, 1A isoform b isoform 3 [Canis familiaris] Length = 1525 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 601 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 658 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + V ++ Sbjct: 659 EDEQRNSAADISVGEEEREDF 679 >gi|52081684|ref|YP_080475.1| DNA topoisomerases I, dispensable insert [Bacillus licheniformis ATCC 14580] gi|52787070|ref|YP_092899.1| YueB [Bacillus licheniformis ATCC 14580] gi|52004895|gb|AAU24837.1| Eukaryotic DNA topoisomerases I, dispensable insert [Bacillus licheniformis ATCC 14580] gi|52349572|gb|AAU42206.1| YueB [Bacillus licheniformis ATCC 14580] Length = 1009 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 7/102 (6%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILI-KKIEDIRARRNSNSAQIGQAIAEGNL 67 + PE + LK+ L + + L+E R E++ + + + +I Sbjct: 487 EQPEDENAKLKE-QLNEAAARLEKLEEDLRAKQDTHNEELEKQIENLNKKISSLK----- 540 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + LK+E LK + L K + S+KK+ + I Sbjct: 541 ENIKDLKHEIKDLKVDIENLNKNFDVIYDSIKKIENGILEYL 582 >gi|225735557|ref|NP_004280.5| nuclear factor erythroid 2-related factor 3 [Homo sapiens] gi|56404677|sp|Q9Y4A8|NF2L3_HUMAN RecName: Full=Nuclear factor erythroid 2-related factor 3; Short=NF-E2-related factor 3; Short=NFE2-related factor 3; AltName: Full=Nuclear factor, erythroid derived 2, like 3 gi|7381112|gb|AAF61404.1|AF134891_1 NF-E2-related factor 3 [Homo sapiens] gi|12002278|gb|AAG43275.1|AF133059_1 NF-E2 related factor 3 [Homo sapiens] gi|7381161|gb|AAF61415.1| NF-E2-related factor 3 [Homo sapiens] gi|119614239|gb|EAW93833.1| nuclear factor (erythroid-derived 2)-like 3 [Homo sapiens] Length = 694 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L K E ++ + + I Sbjct: 579 IRDIRRRGKNK-VAAQNCRKRKLDI----ILNLEDDVCNLQAKKETLKREQAQCNKAINI 633 Query: 61 AIAE 64 + Sbjct: 634 MKQK 637 >gi|27468170|ref|NP_764807.1| glycyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57867007|ref|YP_188708.1| glycyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|293366474|ref|ZP_06613151.1| glycine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258360|sp|Q8CSD5|SYG_STAES RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|71153561|sp|Q5HNY2|SYG_STAEQ RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|27315716|gb|AAO04851.1|AE016748_85 glycyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|57637665|gb|AAW54453.1| glycyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|291319243|gb|EFE59612.1| glycine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329735209|gb|EGG71501.1| glycine--tRNA ligase [Staphylococcus epidermidis VCU045] gi|329737405|gb|EGG73659.1| glycine--tRNA ligase [Staphylococcus epidermidis VCU028] Length = 463 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 9/135 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A E L L++ + L D L + T D+E + Sbjct: 231 KPGEEIEWQNYWKTFASEWLTDLNISEDNMRLRDHDEDELSHYSNATTDIEYKFPF--GW 288 Query: 348 REISSCSTCGNFQSR 362 E+ ++ ++ R Sbjct: 289 GELWGIASRTDYDLR 303 >gi|331213453|ref|XP_003319408.1| hypothetical protein PGTG_01582 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309298398|gb|EFP74989.1| hypothetical protein PGTG_01582 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 460 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 9/71 (12%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNS-----NSAQIGQAIAEGNLSLVDAL----KNETS 78 + + SL+++ R L K+E ++ R + S I S + +++ Sbjct: 5 DEVKSLEKQLRTLQTKLEQLQKRLSKDSSPAISKSINGVTKTQKESDSSPIEKTYMKKSN 64 Query: 79 TLKEQLPILEK 89 E+ + Sbjct: 65 RDSEKKKSHDD 75 >gi|73962719|ref|XP_537409.2| PREDICTED: similar to bromodomain adjacent to zinc finger domain, 1A isoform a isoform 2 [Canis familiaris] Length = 1557 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 633 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 690 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + V ++ Sbjct: 691 EDEQRNSAADISVGEEEREDF 711 >gi|73962731|ref|XP_861743.1| PREDICTED: similar to bromodomain adjacent to zinc finger domain, 1A isoform a isoform 8 [Canis familiaris] Length = 1558 Score = 37.4 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 633 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 690 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + V ++ Sbjct: 691 EDEQRNSAADISVGEEEREDF 711 >gi|46250402|gb|AAH68455.1| Nuclear factor (erythroid-derived 2)-like 3 [Homo sapiens] Length = 694 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L K E ++ + + I Sbjct: 579 IRDIRRRGKNK-VAAQNCRKRKLDI----ILNLEDDVCNLQAKKETLKREQAQCNKAINI 633 Query: 61 AIAE 64 + Sbjct: 634 MKQK 637 >gi|85001261|ref|XP_955349.1| hypothetical protein [Theileria annulata] gi|65303495|emb|CAI75873.1| hypothetical protein TA18800 [Theileria annulata] Length = 668 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 48/121 (39%), Gaps = 3/121 (2%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG-- 65 R + + + L R L + ++N LI + E++ +++ +++ + +E Sbjct: 205 RDDITDIKLNLV-RSNNIAKNEALLVIQENEKLIAENENLLSKQEKLVSELDELKSENQQ 263 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 L + +L+ E LK L + K+ + L + + + E + +S + Sbjct: 264 KLEKIKSLQIEVEDLKSDLIVERKQNEHLLKDKVDLQNRLNLLTKENKSLLSSQEIMQNM 323 Query: 126 R 126 Sbjct: 324 Y 324 >gi|48474942|sp|Q99M74|KRT82_MOUSE RecName: Full=Keratin, type II cuticular Hb2; AltName: Full=Keratin-82; Short=K82; AltName: Full=Type II hair keratin Hb2; AltName: Full=Type-II keratin Kb22 gi|13488601|gb|AAK26232.1| type II hair keratin [Mus musculus] gi|148672091|gb|EDL04038.1| keratin 82 [Mus musculus] Length = 516 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L + IE ++ +R I QA +G +L DA K Sbjct: 325 DNLRNRK-----NEILEMNKLIQRLQQDIEAVKGQRCKLEGAIAQAEQQGEAALTDA-KC 378 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISC 104 + + L+E L +++ + +++++C Sbjct: 379 KLAGLEEALQKAKQDMACLLKQYQEVMNC 407 >gi|332291097|ref|YP_004429706.1| band 7 protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169183|gb|AEE18438.1| band 7 protein [Krokinobacter diaphorus 4H-3-7-5] Length = 688 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 9/114 (7%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS-AQIGQAIAEG----- 65 +++ L KR E + I D + R I +++ A + +I + Sbjct: 212 QNVQSNLIKRDEE---KTIRKQDVEAREAILELDKQLAEKEEQQLREIANIKSREGAETL 268 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 ++ + LK+ET+ + + + EE+ + + +E + Sbjct: 269 KVAEEERLKSETARIATEEKVKVAEENMQRQIIVAEKNKQRTEAVETERVEKDR 322 >gi|281343584|gb|EFB19168.1| hypothetical protein PANDA_000609 [Ailuropoda melanoleuca] Length = 1688 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 29 YILSLDEKNRILI---KKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNETSTLKEQ 83 + L EK R L K +++ ++N+ Q+ + + E + ++ L+ ET+ L+E+ Sbjct: 645 EVQELQEKLRALERESTKTQELNRQQNAQLEQLAKELQLKEEAQADLERLRKETAPLREE 704 Query: 84 LPILEKEEHEVCSSLKKLISCIPN 107 L +E ++ L++ ++ + + Sbjct: 705 LAAKGQEATQLRRQLREALAHLSS 728 >gi|224372435|ref|YP_002606807.1| hypothetical protein NAMH_0385 [Nautilia profundicola AmH] gi|223589427|gb|ACM93163.1| hypothetical protein NAMH_0385 [Nautilia profundicola AmH] Length = 195 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 26/80 (32%), Gaps = 4/80 (5%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA----IAEGNLSLVDALKN 75 + L+ + I L++K +IE+++ +I ++ E L Sbjct: 23 NKKLDLLLQKIEQLEKKVDKKDAEIEELKKEIKVQQKEIKKSNEEVKKEVKTQLAVKSCK 82 Query: 76 ETSTLKEQLPILEKEEHEVC 95 + + + ++ Sbjct: 83 KIKVVNMKYKYHDEVIPYYD 102 >gi|195978992|ref|YP_002124236.1| Emm-like cell surface protein CspZ.2 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975697|gb|ACG63223.1| Emm-like cell surface protein CspZ.2 [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 626 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 4/87 (4%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILE 88 L ++ L K++D++ + S +I + E N L + LKEQL ++ Sbjct: 306 QQLKKEKEALETKLQDLQKQAKEKSTEIEKLKQELEANKQNSGQLGQQEQKLKEQLNKVQ 365 Query: 89 KEEHEVCSSLK--KLISCIPNVPLEEV 113 +E + L+ K P E Sbjct: 366 EELKQKEMELEKAKEQLKQEQKPHEGD 392 >gi|153930866|ref|YP_001385258.1| TP901 family phage tail tape measure protein [Clostridium botulinum A str. ATCC 19397] gi|152926910|gb|ABS32410.1| phage tail tape measure protein, TP901 family [Clostridium botulinum A str. ATCC 19397] Length = 1714 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 53/126 (42%), Gaps = 15/126 (11%) Query: 4 IQWIRQNPEHLD-------IALKKRHLEPQ------SEYILSLDEKNRILIKKIEDIRAR 50 I+ + +N E + L+KR+ + ++ + E+ ++E++ Sbjct: 1330 IKDL-ENQEAIVVVQSKKVEDLRKRYEDLAYTFGVTADEAIKAREEFEKARVELENMANA 1388 Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNE-TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + S +I + I + +++DAL+ K + L++E + + K+ + I +V Sbjct: 1389 VSEVSKKIAEDINKFQKTVIDALRERYAQQFKLEEDALKEEITNLDNWKKESLDRINSVY 1448 Query: 110 LEEVPI 115 E + Sbjct: 1449 DERIKK 1454 >gi|74202351|dbj|BAB31710.3| unnamed protein product [Mus musculus] Length = 316 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|66803542|ref|XP_635612.1| hypothetical protein DDB_G0290503 [Dictyostelium discoideum AX4] gi|74896865|sp|Q54G05|LRRX1_DICDI RecName: Full=Putative leucine-rich repeat-containing protein DDB_G0290503 gi|60463949|gb|EAL62112.1| hypothetical protein DDB_G0290503 [Dictyostelium discoideum AX4] Length = 1492 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 2/123 (1%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 + + +N E LK + L S+ + DEK I ++++ N N +I + I Sbjct: 480 LNQLIENNESSSDELKLK-LNQLSDELQEKDEKLLNNQSVINELQSNLNENQNKINELI- 537 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 E N S D LK + + L ++L +++ + SS+ + I + NE + Sbjct: 538 ENNQSSSDELKLKLNQLSDKLQEKDEKLKSLESSIIERDEKIDQLQDNLNEKQDKINELV 597 Query: 124 LIR 126 Sbjct: 598 ENN 600 >gi|327268535|ref|XP_003219052.1| PREDICTED: intersectin-1-like [Anolis carolinensis] Length = 1719 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 53/159 (33%), Gaps = 3/159 (1%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 Q +R + ++ + R + + + ++ R I + ++ ++N + +I Q E Sbjct: 580 QQLRDQLDEVEK--ETRSKLQEIDIFNNQLKELRE-IHNKQQLQKQKNIEADRIKQKEQE 636 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 L N+ T + + L++ + E + I EE+ +E Sbjct: 637 RKTELEKQKDNQRRTQERERQWLDRIQQEEEHPKPRKIQDEETQKWEELNKKRENDERNK 696 Query: 125 IRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR 163 K H R+ + ++A A Sbjct: 697 QEVQEKLNKLFHQHRDLTKPALQAPWSTAEKAPLTFSAP 735 >gi|298384357|ref|ZP_06993917.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 1_1_14] gi|298262636|gb|EFI05500.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 1_1_14] Length = 862 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 8/85 (9%) Query: 28 EYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQA-------IAEGNLSLVDALKNETST 79 + + L DE L +++ + + S +I Q E + ++ + E + Sbjct: 386 DKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIEREAIKRENDKPKLEIIGKELAE 445 Query: 80 LKEQLPILEKEEHEVCSSLKKLISC 104 LKE + + + + K+ Sbjct: 446 LKEAEKSFKAKWQSEKTLMDKIQQN 470 >gi|281211498|gb|EFA85660.1| structural maintenance of chromosome protein [Polysphondylium pallidum PN500] Length = 1415 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Query: 13 HLDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ--AIAEGNLSL 69 + L++R +E +++ L +K + + + +RA R+ I + L L Sbjct: 306 LFEEHLERRAKVEVNLKHLKDLTKKQKS---RYDKLRAERDKLEKSITSTTSKISDTLPL 362 Query: 70 VDALKNETSTLKEQLPILE 88 ++++ E TL EQ+ E Sbjct: 363 IESIDEELKTLDEQISSNE 381 >gi|172087805|ref|YP_206390.2| fused chromosome partitioning protein: nucleotide hydrolase [Vibrio fischeri ES114] gi|171902388|gb|AAW87502.2| fused chromosome partitioning protein: predicted nucleotide hydrolase [Vibrio fischeri ES114] Length = 1488 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 4/112 (3%) Query: 6 WIRQNPEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 ++RQN + + L+ R LE E +L ++ + +++ ++A+ + S + + Sbjct: 912 FLRQNGKAIAE-LETLQRALEVDPEQFDALKAEHEQIDAQLQSLKAQLFAISDLVERRHH 970 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 G AL N++S L EQL + + + K+ + + + Sbjct: 971 FG-YEDAVALLNKSSELNEQLKAKLVQAEQARTKAKEQQKQAQSQANQYNQV 1021 >gi|152990353|ref|YP_001356075.1| chemotaxis sensor histidine kinase CheA [Nitratiruptor sp. SB155-2] gi|151422214|dbj|BAF69718.1| chemotaxis sensor histidine kinase CheA [Nitratiruptor sp. SB155-2] Length = 673 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 49/104 (47%), Gaps = 6/104 (5%) Query: 1 MLDIQWIRQNPEHLD---IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 M+D+ I + + L LK + P + I L +K +++ E +A +++ S Q Sbjct: 91 MMDV--ILEGIDVLKSAIETLKSENEIPDVDEIKPLLDKLNHILENPESFQADKSARSEQ 148 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 I + + E S + + +++KE++ + + ++ +++ Sbjct: 149 ISE-VTEQEPSEAEQESSNNNSIKEEIIFHDDVDEKIQQLIREH 191 >gi|145230682|ref|XP_001389605.1| nuclear segregation protein (Bfr1) [Aspergillus niger CBS 513.88] gi|134055724|emb|CAK44097.1| unnamed protein product [Aspergillus niger] Length = 506 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 52/149 (34%), Gaps = 16/149 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR-------------NSNS 55 +N E LD + + + S + +DE R ++ + ++R +R N Sbjct: 118 KNVEELDREIARLEKQVDSGTLRLVDE--RKILSDVSNLRKQRKNFAGLEEAQKVINDLK 175 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QI + AL ++ S ++++L ++ E+ +L + E Sbjct: 176 TQIASLKKTLDNPEAKALSDKYSEIQKELDAIKAEQDSAFKNLNA-LRDERTKLHGEQQK 234 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEI 144 +A I + + E + + Sbjct: 235 KWTAIREIKDNYYKARKAYKEYEDEAWRV 263 >gi|282398110|ref|NP_444479.2| keratin, type II cuticular Hb2 [Mus musculus] gi|80477964|gb|AAI08972.1| Keratin 82 [Mus musculus] Length = 516 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L + IE ++ +R I QA +G +L DA K Sbjct: 325 DNLRNRK-----NEILEMNKLIQRLQQDIEAVKGQRCKLEGAIAQAEQQGEAALTDA-KC 378 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISC 104 + + L+E L +++ + +++++C Sbjct: 379 KLAGLEEALQKAKQDMACLLKQYQEVMNC 407 >gi|57108191|ref|XP_535474.1| PREDICTED: similar to Ubiquitin carboxyl-terminal hydrolase 8 (Ubiquitin thiolesterase 8) (Ubiquitin-specific processing protease 8) (Deubiquitinating enzyme 8) (hUBPy) isoform 1 [Canis familiaris] Length = 1116 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 9/168 (5%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR-ARRNSNSAQIGQA 61 +I+ + E L +LK R+ E + L+EK+R ++ E ++ +R + G Sbjct: 94 NIKKAIEEAERLSESLKLRYEEAEVRK--KLEEKDR---QEEEQLQKQKRQEAGREDGGT 148 Query: 62 IAEGNLSLVDALKNETSTL---KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + +L V +++T + K + ++ L ++ + Sbjct: 149 STKSSLENVMDSRDKTQKINGEKSEKNETTEKGTITAKELYTMMMDENISLIIMDARRMQ 208 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I + P EA D K G+ V Sbjct: 209 DYQDSHISNSLCVPEEAISPGVTASWIEAKLPDDSKDTWKKRGSVEYV 256 >gi|38016129|ref|NP_932167.1| kinesin-like protein KIF27 [Rattus norvegicus] gi|81894343|sp|Q7M6Z5|KIF27_RAT RecName: Full=Kinesin-like protein KIF27 gi|32140149|tpg|DAA01311.1| TPA_exp: kinesin-related protein KIF27A [Rattus norvegicus] Length = 1394 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Query: 9 QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 ++ + L +R + + LDE+ + L +++E + ++R + + Sbjct: 898 EDTDAF--NLNRRKGPFRSVDQLQKLDEQRKWLDEEVEKVLSQRQELEMLEEELKKREAI 955 Query: 68 -SLVDALKNETSTLKEQ 83 S +AL E S L+ + Sbjct: 956 VSKKEALLQEKSHLENK 972 >gi|115464933|ref|NP_001056066.1| Os05g0519700 [Oryza sativa Japonica Group] gi|62510680|sp|Q6F2Y7|HS101_ORYSJ RecName: Full=Heat shock protein 101 gi|18033450|gb|AAL57165.1|AF332981_1 heat shock protein [Oryza sativa Japonica Group] gi|50080323|gb|AAT69657.1| putative heat shock protein HSP101 [Oryza sativa Japonica Group] gi|52353699|gb|AAU44265.1| heat shock protein HSP101 [Oryza sativa Japonica Group] gi|113579617|dbj|BAF17980.1| Os05g0519700 [Oryza sativa Japonica Group] gi|215740589|dbj|BAG97245.1| unnamed protein product [Oryza sativa Japonica Group] gi|222632258|gb|EEE64390.1| hypothetical protein OsJ_19232 [Oryza sativa Japonica Group] Length = 912 Score = 37.4 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 37/103 (35%), Gaps = 12/103 (11%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L + + ++ S + + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVEHHALEKEKDKASKARLVEVKKELDD 453 Query: 69 LVDAL----------KNETSTLKEQLPILEKEEHEVCSSLKKL 101 L D L K +++ E+ + + + +++ Sbjct: 454 LRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFTLQEAERRM 496 >gi|301618682|ref|XP_002938745.1| PREDICTED: hypothetical protein LOC100496075 [Xenopus (Silurana) tropicalis] Length = 1994 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 15/99 (15%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS-----AQIGQAIAEGNLSLVDALK 74 KR LE E L +D R L +K ++ + ++N S Q +GN + +L+ Sbjct: 568 KRQLE---ESALEIDSLKRQLKEKQDEAQNQQNQLSESTTEKNALQRKLQGNAEEILSLQ 624 Query: 75 NETST-------LKEQLPILEKEEHEVCSSLKKLISCIP 106 + LKE+L + KE ++ Sbjct: 625 KQLDKSIKECHLLKEELQGMVKESLKMQHHDGNEEMQTQ 663 >gi|300725958|ref|ZP_07059420.1| MutS2 family protein [Prevotella bryantii B14] gi|299776809|gb|EFI73357.1| MutS2 family protein [Prevotella bryantii B14] Length = 565 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 36/98 (36%), Gaps = 15/98 (15%) Query: 15 DIALKKRHLEPQSE------YILSLDEKNRILI----KKIEDIRARRNSNSAQIGQAIAE 64 + +R + + ++ + + ++ ++ E++ N +I I E Sbjct: 259 RQNIHQREKDMDKAVSRYETRLQEIEAQRKEILAKARQEAEELLKESN---KKIENTIRE 315 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 + K ET ++++L EKE + + + Sbjct: 316 IREKQAE--KEETKRIRQELHEFEKEVSAIDTKANDDM 351 >gi|303321277|ref|XP_003070633.1| hypothetical protein CPC735_063610 [Coccidioides posadasii C735 delta SOWgp] gi|240110329|gb|EER28488.1| hypothetical protein CPC735_063610 [Coccidioides posadasii C735 delta SOWgp] gi|320035885|gb|EFW17825.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 452 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 49/102 (48%), Gaps = 15/102 (14%) Query: 19 KKRHLEPQSEYILSLDEK-----------NRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 +R + + +L+L E+ R ++++++ ++ N +I + +G+ Sbjct: 100 ARRGILKAMDGLLTLREEERRVIGFELGCRREALREVDNFVSKHNGL--EIALSQMQGDQ 157 Query: 68 S--LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 +D+LKNE+ L++++ LE E+ + +++ + I Sbjct: 158 ETLRMDSLKNESRALEKEIMALENHLAEMKARHRQIFNEITQ 199 >gi|195328633|ref|XP_002031019.1| GM25754 [Drosophila sechellia] gi|194119962|gb|EDW42005.1| GM25754 [Drosophila sechellia] Length = 744 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 51/149 (34%), Gaps = 13/149 (8%) Query: 11 PEHLDIALKKRHLEPQSEY------ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI-- 62 + L L++R+ +++ I LD+ +I +++A + +++ A Sbjct: 539 IQKLKSELEERNKAFKAQQDKLEFLISDLDKLKNAII----NLQAEKMEIESELSTAKVK 594 Query: 63 -AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 +E S D+L + S L+ ++ E E E+ ++ + + Sbjct: 595 FSEELQSQKDSLMKKVSELELEIKRKETELIELEREKNNEMAVLQFKMNRINCVIDQPVT 654 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGL 150 I K P+ + G Sbjct: 655 TIKQLKDSKGPTKTESIPTKVQPESTDGF 683 >gi|147678457|ref|YP_001212672.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum thermopropionicum SI] gi|146274554|dbj|BAF60303.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum thermopropionicum SI] Length = 871 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 15/143 (10%) Query: 1 MLDIQWIRQNP------EHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRN 52 ML ++I + +D A + +E S I +D + R L + + + ++ Sbjct: 375 MLSHRYISDRFLPDKAIDLVDEAASRLRIEIDSMPTEIDEIDRRIRQLEIEKQALAKEQD 434 Query: 53 SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 S + + + ALK+ LKE KE+ + S + E+ Sbjct: 435 KGSQE----RLQKIEGELAALKSRLEDLKE---HWRKEKELIQSIREIKERIEETRLAEQ 487 Query: 113 VPIGTSANENILIRSVGKKPSAI 135 + + G P Sbjct: 488 AAEREADLGKVAELRYGVMPELN 510 >gi|152977206|ref|YP_001376723.1| glycyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025958|gb|ABS23728.1| glycyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 458 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 9/136 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 172 TAQGIFVNFKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + + L L + R+ +L + T D+E + Sbjct: 228 KPGEELEWFTFWRETCKNWLLSLGMNEDSMRLRDHGEEELSHYSNATTDIEFKFPF--GW 285 Query: 348 REISSCSTCGNFQSRR 363 E+ ++ +F +R Sbjct: 286 GELWGIASRTDFDLKR 301 >gi|313004735|emb|CBJ25099.1| C. elegans protein C34E11.3a, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|313006901|emb|CBJ25060.1| C. elegans protein C34E11.3a, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|313006917|emb|CBJ25078.1| C. elegans protein C34E11.3a, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1636 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 10/122 (8%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILI----KKIEDIRARRNSNSAQIGQ 60 + +R E L +++ LE + + + K + L + E + RN S Sbjct: 844 KKLRAETELLRKDMQE--LETDKKTVKEFEIKYKKLESIFETEREKMNGERNR-SKNELA 900 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ + + LK + K+ + E+ ++ K + +P E ++A Sbjct: 901 AMKKLKDDAEEHLKKLSDDQKKNDAAWKIEKSKLE---KDIALLKKQLPDEHEMKESTAT 957 Query: 121 EN 122 Sbjct: 958 PQ 959 >gi|294497108|ref|YP_003560808.1| glycyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|295702473|ref|YP_003595548.1| glycyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294347045|gb|ADE67374.1| glycyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294800132|gb|ADF37198.1| glycyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 460 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E R +F + EL Sbjct: 173 TAQGIFVNFKNVQRSMRKKLPFGIGQVGKSFRNEI----TPGNFTFRTREFEQMELEFFC 228 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + L L + V L D L + T D E + Sbjct: 229 KPGTELEWFNYWKETCNKWLLSLGMKEENVRLRDHDDDELSHYSNATTDFEYKFPF--GW 286 Query: 348 REISSCSTCGNF 359 E+ ++ ++ Sbjct: 287 GELWGVASRTDY 298 >gi|126466134|ref|YP_001041243.1| hypothetical protein Smar_1243 [Staphylothermus marinus F1] gi|126014957|gb|ABN70335.1| hypothetical protein Smar_1243 [Staphylothermus marinus F1] Length = 305 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 SE I +LDEK R L ++IE++ + + +I + V++L + + L E+L Sbjct: 194 SENISTLDEKIRSLRQQIEELNKQVEDINEEIAK-----RQERVNSLSKQINELIEKLNN 248 Query: 87 LEKEEH 92 L +E Sbjct: 249 LREEYQ 254 >gi|123477366|ref|XP_001321851.1| hypothetical protein [Trichomonas vaginalis G3] gi|121904685|gb|EAY09628.1| hypothetical protein TVAG_056720 [Trichomonas vaginalis G3] Length = 215 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 2/101 (1%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTL 80 S+ + +L + + L +I + N +I + N + LK + L Sbjct: 111 YNTNSQEVSNLHTEIQNLKAQIVSLENETNKYKEEINTYKEQNNTFKDEISNLKKDNDQL 170 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 K+++ L + ++ S+ I + + + Sbjct: 171 KKEISTLNNKNDQLQRSIDDFAKIIQLISSDFDRVYDFLKC 211 >gi|973315|gb|AAA75043.1| glycoprotein precursor polypeptide [Sandfly fever sicilian virus] Length = 1341 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 16/111 (14%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILS-LDEKNR----ILIKKIEDIRARRNSNSAQ 57 D + +++N E D ++++ + E + + LD +N+ + +K +I+ RN Sbjct: 144 DYEKLKKNAEEKDATIQRK--TKEMEEVRAVLDSRNQIAHHEIQQKENEIQKLRNDLRDA 201 Query: 58 IGQAIAEGNLSLVDALK-----NETSTLKEQLPILEKEEHEVCSSLKKLIS 103 I +G L+ LKE+L L + + ++ +L Sbjct: 202 I----KKGQEHESMKLRVEESDARVKGLKEELKQLTYKIFDHQATKDELQH 248 >gi|51094992|gb|EAL24236.1| nuclear factor (erythroid-derived 2)-like 3 [Homo sapiens] Length = 694 Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L K E ++ + + I Sbjct: 579 IRDIRRRGKNK-VAAQNCRKRKLDI----ILNLEDDVCNLQAKKETLKREQAQCNKAINI 633 Query: 61 AIAE 64 + Sbjct: 634 MKQK 637 >gi|332521561|ref|ZP_08398015.1| PAS sensor protein [Lacinutrix algicola 5H-3-7-4] gi|332042960|gb|EGI79159.1| PAS sensor protein [Lacinutrix algicola 5H-3-7-4] Length = 1932 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 17/170 (10%), Positives = 64/170 (37%), Gaps = 21/170 (12%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSL---------DEKNRILIKKIEDIRARRNSN 54 ++ IR+N E + +++ + +++L +EKN+ ++++ ++ Sbjct: 1053 LELIRKNGEQFLASFLAGNIKNDKDEVIALFGTMKDISEEEKNKKILRENAKKSKQKKEV 1112 Query: 55 SAQIGQAIAEGNLSLVDALKNETST------------LKEQLPILEKEEHEVCSSLKKLI 102 ++ + + + + ++ + + K+ + ++ +++ ++ Sbjct: 1113 ILELAKLVGKDLKTSLNKITKLAAQTLDVGRVNIWSYNKDNVEFYCEKNYDLETNKYTKG 1172 Query: 103 SCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 + A + I++ V P ++E+F + +MD Sbjct: 1173 DIVDLTVHSAYLEQLKAEKTIIVNDVLTNPITKDSAQEYFIPNKIKSMMD 1222 >gi|328769644|gb|EGF79687.1| hypothetical protein BATDEDRAFT_89402 [Batrachochytrium dendrobatidis JAM81] Length = 299 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 44/138 (31%), Gaps = 7/138 (5%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKK-IEDIRARRN-SNSAQIG 59 D+ ++PE + + ++ L E+N+ ++ +E R S + + Sbjct: 68 HDVAKFLEHPEKIAEL-----DSQHVDLLIKLLEQNKQSYQRWLESKAYERKLSRAKDLA 122 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 +A + A + L ++ + E + + LK+ + + + + Sbjct: 123 EAKKQRTEQERKAAREIQQRLNTKMKLDEWKRKKDLERLKEQVQSHDEMQQIKTEVAQRR 182 Query: 120 NENILIRSVGKKPSAIHL 137 E + Sbjct: 183 KEANKAYHIWYHNYCQKQ 200 >gi|289435765|ref|YP_003465637.1| peptidase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172009|emb|CBH28555.1| peptidase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 441 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 5/99 (5%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 RQN + ++L+ +S I L+ + K++E + + + + A+ + Sbjct: 33 RQNEIEQKKSEVNKNLDTKSSEIADLENDEKNASKQLESLLKSIDETNK---KLKAQEDK 89 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + + LK+ + L + E L I Sbjct: 90 VESEN--KKLKQLKKDIEKLRNDIKERQEVLDNRARAIQ 126 >gi|257388095|ref|YP_003177868.1| Kinetochore-Ndc80 subunit Spc25 [Halomicrobium mukohataei DSM 12286] gi|257170402|gb|ACV48161.1| Kinetochore-Ndc80 subunit Spc25 [Halomicrobium mukohataei DSM 12286] Length = 647 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 11/98 (11%) Query: 6 WIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI--GQAIA 63 I + + +D +LK+R + L+E+ R L ++E R+ S +I A Sbjct: 145 HIDEQLDEID-SLKQR--------LPDLEEQKRELQNEVEAKRSELESLETEIEEADASV 195 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 E D L+ L++ LE +E+ + K+ Sbjct: 196 ESQREERDELETALEELRDVRSTLEDVRYEIEAKRKRH 233 >gi|242021039|ref|XP_002430954.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516174|gb|EEB18216.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 869 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQI--GQAIAEGNLSLVDALKNE-TSTLKEQ 83 + + ++ NR L +K ED+ S +I + + E +S + A K + +K + Sbjct: 591 LKKVEEKEQINRELQQKTEDLNM---LISQKILDKEKVKEKCVSKIAAAKEKLAREMKLK 647 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 L E ++ I E P Sbjct: 648 LNKERDEYQTKMKDQQEKFRMIREFLDEATPK 679 >gi|163802042|ref|ZP_02195938.1| TolA protein [Vibrio sp. AND4] gi|159174183|gb|EDP58991.1| TolA protein [Vibrio sp. AND4] Length = 342 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 28/95 (29%), Gaps = 16/95 (16%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI-A 63 + IRQ E + R LD+ R + E + R + AQI + Sbjct: 62 KEIRQQREKAAKKEQNR-----------LDKLRR----EAEQLEKNRKAEEAQIRKLKEQ 106 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 + + KEQ E+E Sbjct: 107 QAKDAKAAREAEAVRKKKEQERKAEEERTRKAKQQ 141 >gi|118367791|ref|XP_001017105.1| Dynein heavy chain family protein [Tetrahymena thermophila] gi|89298872|gb|EAR96860.1| Dynein heavy chain family protein [Tetrahymena thermophila SB210] Length = 4137 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIK-KIEDIRARRNSNSAQIGQAIAEGNLSLV 70 E LK+R + + L E + LIK K + + +++N S G + + Sbjct: 2648 ETYFKNLKRRVY-ITPKSYIDLIESYKQLIKMKQDQLESQKNKLSN--GLYKLKEANDTI 2704 Query: 71 DALKNETSTL 80 +LK + + L Sbjct: 2705 ASLKEKLTEL 2714 >gi|74000101|ref|XP_862575.1| PREDICTED: similar to Ubiquitin carboxyl-terminal hydrolase 8 (Ubiquitin thiolesterase 8) (Ubiquitin-specific processing protease 8) (Deubiquitinating enzyme 8) (hUBPy) isoform 3 [Canis familiaris] Length = 1087 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 9/168 (5%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR-ARRNSNSAQIGQA 61 +I+ + E L +LK R+ E + L+EK+R ++ E ++ +R + G Sbjct: 94 NIKKAIEEAERLSESLKLRYEEAEVRK--KLEEKDR---QEEEQLQKQKRQEAGREDGGT 148 Query: 62 IAEGNLSLVDALKNETSTL---KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + +L V +++T + K + ++ L ++ + Sbjct: 149 STKSSLENVMDSRDKTQKINGEKSEKNETTEKGTITAKELYTMMMDENISLIIMDARRMQ 208 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 ++ I + P EA D K G+ V Sbjct: 209 DYQDSHISNSLCVPEEAISPGVTASWIEAKLPDDSKDTWKKRGSVEYV 256 >gi|326931017|ref|XP_003211633.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 4-like [Meleagris gallopavo] Length = 1238 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 34/97 (35%), Gaps = 9/97 (9%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 E K + +E + +++ + L ++E + ++ + A+ + Sbjct: 25 EQAAQKTKTKFIEFEDSQ----EQEKKDLQTRVEALESQTRQL-----ELKAKNYADQIS 75 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 L+ + LK++ L E+ + + + Sbjct: 76 RLEEREAELKKEYNALHSRHTEMIHNYMEHLERTKLH 112 >gi|291550078|emb|CBL26340.1| condensin subunit Smc [Ruminococcus torques L2-14] Length = 1186 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 25/217 (11%), Positives = 68/217 (31%), Gaps = 10/217 (4%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQL 84 E I +DE+ K+ E++ R S +I Q EG ++ K + + E++ Sbjct: 830 VENISRIDEEITRYEKEQEELAENRGDVSEEILQKENEIEGLRKTIEDSKELFTEIGEEI 889 Query: 85 PILEKEEHEVCSSLKKLISC---IPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + K+ E+ + + + + N + ++ E+ Sbjct: 890 KVQSKKREELNQQHRDFLRQREELAKHVSDLDKECFRLNSQKEGYEEASEKQMNYMWEEY 949 Query: 142 FEIGEALGLMDFDRATKLSGARFSVL--TGHLAHLERALGQFMIDLHTSEHGYTEVSAPL 199 + + T L+ + + + L + D YT + Sbjct: 950 ELTYNHAKELRNETLTDLALMKKKIQELKNEIRKLGSVNVNAIEDYKNVSERYTFLKGQH 1009 Query: 200 LVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSL 236 D+ + + + +++ ++ + ++ Sbjct: 1010 ---DDLVEAEASLEQIIEELDVAMRKQFTEQFARIAT 1043 >gi|242045178|ref|XP_002460460.1| hypothetical protein SORBIDRAFT_02g028640 [Sorghum bicolor] gi|241923837|gb|EER96981.1| hypothetical protein SORBIDRAFT_02g028640 [Sorghum bicolor] Length = 1408 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 11/140 (7%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS------AQIGQAIAEG 65 E LD + K+ Q E I SL E+ ++LIK+I +++A+R S A+I +A + Sbjct: 923 EELDELIAKKERTMQHETISSLKEE-KLLIKEINELKAQRKQLSATMGSKAEINEAFDQK 981 Query: 66 N--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 + LK ++ L L LE+ ++ S + + + + E + Sbjct: 982 DHIHERHKVLKKDSDVLFTNLKALEENTRKIQKSFEDERTALRKLTEE--HRAANEIRQK 1039 Query: 124 LIRSVGKKPSAIHLSREHFE 143 + + E+F Sbjct: 1040 AYSEWTELRNEPSKKNEYFF 1059 >gi|187934816|ref|YP_001884426.1| glycyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|187722969|gb|ACD24190.1| glycine--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 463 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 176 TAQGIFVNFKAVQRSSRKKVPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 231 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLY 347 + H+ L L++ + + +L F + T D+E + Sbjct: 232 KPGTDLEWHKYWKDYCWNFLLNLNVKTENLRMRDHGEEELSFYSNATSDIEYLFPF--GW 289 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 290 GELWGIADRTDY 301 >gi|119583071|gb|EAW62667.1| kinesin family member 27, isoform CRA_a [Homo sapiens] Length = 996 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Query: 9 QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 ++ + LK+R +++ LDE+ + L +++E + +R + Sbjct: 832 EDLDAC--NLKRRKGSFGSIDHLQKLDEQKKWLDEEVEKVLNQRQELEELEADLKKREAI 889 Query: 68 -SLVDALKNETSTLKEQ 83 S +AL E S L+ + Sbjct: 890 VSKKEALLQEKSHLENK 906 >gi|114612468|ref|XP_519002.2| PREDICTED: nuclear factor erythroid 2-related factor 3 [Pan troglodytes] Length = 692 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L K E ++ + + I Sbjct: 579 IRDIRRRGKNK-VAAQNCRKRKLDI----ILNLEDDVCNLQAKKETLKREQAQCNKAINI 633 Query: 61 AIAE 64 + Sbjct: 634 MKQK 637 >gi|73945728|ref|XP_541173.2| PREDICTED: similar to villin 2 isoform 1 [Canis familiaris] Length = 586 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 35/91 (38%), Gaps = 2/91 (2%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGNLSLVDALKNETSTL 80 L Q + L L+E+ + ++ E + A R + + + + A + + L E + Sbjct: 365 LSDQIQRALQLEEERKRAQEEAERLEADRVAALRAKEELERQAADQIKSQEQLAAELAEY 424 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 ++ +LE+ +++ + Sbjct: 425 TAKIALLEEARRRKEDEVEEWQHRAKEAQDD 455 >gi|6683494|dbj|BAA89209.1| bromodomain adjacent to zinc finger domain 1A [Homo sapiens] Length = 1674 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 751 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 808 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + + ++ Sbjct: 809 EDEQRNSTADISIGEEEREDF 829 >gi|332027395|gb|EGI67478.1| Tuftelin-interacting protein 11 [Acromyrmex echinatior] Length = 827 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 11/170 (6%) Query: 22 HLEPQSE----YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA-----EGNLSLVDA 72 +L + I+ D + R L ++ + A + + S + Q E L +VD Sbjct: 320 NLNLLVDMCEQDIIQNDRRMRHLNDRVIALEAEKKNLSKVMDQHSQLIDTLENVLVIVDK 379 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 L NET+ L L + + ++ + L + + +L + +P Sbjct: 380 LMNETNELS--LQETAEAFKNLQNNYYEEYKMYELGELASSFVAPKIKDCLLNWNPLIQP 437 Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFM 182 E ++ G + + V + + A+ Q+ Sbjct: 438 KQPIKLFEQWKDILENGTSTTLQTRTMQSYDQLVWNAWMPSVRGAIQQWT 487 >gi|330917921|ref|XP_003298013.1| hypothetical protein PTT_08594 [Pyrenophora teres f. teres 0-1] gi|311329017|gb|EFQ93891.1| hypothetical protein PTT_08594 [Pyrenophora teres f. teres 0-1] Length = 1625 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 42/98 (42%), Gaps = 8/98 (8%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 D++ I ++ E +L+ + + + L+ L + + + A +N Q + Sbjct: 791 DLRVIGEDYEREIESLR---ADLEGDATNRLN----KLQAEFDSLVAEKNELHKQ-HDLV 842 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ALK E + L++ + + + S LK+ Sbjct: 843 IAERSAELEALKQELANLQDNITSAAADHEKTLSKLKQ 880 >gi|303243884|ref|ZP_07330224.1| regulatory protein MarR [Methanothermococcus okinawensis IH1] gi|302485820|gb|EFL48744.1| regulatory protein MarR [Methanothermococcus okinawensis IH1] Length = 485 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 5/100 (5%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 + ++I L +KN+ L K++++ + N +I + ++ LK+ + L Sbjct: 280 NIKDDHIKELMDKNKELNNKLDELILKINKLEMEI-----KDKEDIIKKLKDINNELSNN 334 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 + + E + S + +L E + + I Sbjct: 335 IDYYKNEISTLNSKIDELNELYNKEMEEIDELNKYSENII 374 >gi|291238837|ref|XP_002739333.1| PREDICTED: zinc finger protein 347-like [Saccoglossus kowalevskii] Length = 793 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 28/270 (10%), Positives = 65/270 (24%), Gaps = 18/270 (6%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST--LKEQLP 85 ++++S K I+I +++++ + Q+ + + N + +D K E + Sbjct: 331 DHMMSAHSKRLIIINEVDEVMEETEQATVQVVENMETDNDAQIDMDKEEEENGSFSAAVQ 390 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 + + + + + + E Sbjct: 391 QFIELQDTGDPVEPINSGIHGYRVTHKCYLCHRSFRGKSYLRAHLRKHTGEKPFECTYCP 450 Query: 146 EALGLMDFDRATKLSGARFS-VLTGHLAHLERALGQFMIDLHTSEHG--YTEVSAPLLVR 202 + DF L G L + + L + Y + Sbjct: 451 KRFRCKDFLNKHLLIHTNERRYKCGECGKLYKRITHVKEHLRIHSNERPYVCEHCSKGFK 510 Query: 203 DEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFR 262 + + T + +D E + + F+ Sbjct: 511 TKNILQT-HLRTHTNDAPWKCQ-YCTKSFKEKASVVRHERSHTGE-----------RPFK 557 Query: 263 SEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 E G G LR+H+ K Sbjct: 558 CERCGKGFAEHGTLRRHERSKVPCKPSAEP 587 >gi|253742890|gb|EES99543.1| Kinase, NEK [Giardia intestinalis ATCC 50581] Length = 705 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 2/90 (2%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEK 89 SL+ + +I + RN S +I E +DAL+ + + + E L + Sbjct: 314 SLETALKDANVRISALERERNIMSVEIDVLKKELEMKSIKIDALEKQFTRITEALEEKTR 373 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + ++ + E + Sbjct: 374 QLKAEMDQQREEVERWQKELDEALKAANEE 403 >gi|194755042|ref|XP_001959801.1| GF13052 [Drosophila ananassae] gi|190621099|gb|EDV36623.1| GF13052 [Drosophila ananassae] Length = 1482 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 50/137 (36%), Gaps = 25/137 (18%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRI------------LIKKIEDIRARR 51 ++ + +NP+++ AL++ E SE ++ +DEK L +K+++ A Sbjct: 242 LKLLGENPDNITAALERSGQELNSEKLIDIDEKAASSANGASGEDITLLQQKLKESEALL 301 Query: 52 NSNSAQIGQAIAEGNL-------------SLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 + + + + ++ E L+E+L LE + S Sbjct: 302 KEVTEKYEALRKQEEENVLLLAQTKQAIHTELEHKDIEVRNLQEKLKQLEAQRESHTSDA 361 Query: 99 KKLISCIPNVPLEEVPI 115 K+ + + E Sbjct: 362 KEQLKKFQSSKQEVDAK 378 >gi|118369302|ref|XP_001017856.1| hypothetical protein TTHERM_00440620 [Tetrahymena thermophila] gi|89299623|gb|EAR97611.1| hypothetical protein TTHERM_00440620 [Tetrahymena thermophila SB210] Length = 893 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 34/91 (37%), Gaps = 2/91 (2%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI--AEGNLSL 69 E R ++ + I E+ + I++I ++ + +I + N Sbjct: 235 EEERKQEMDRKMDLIKDKIDKAKEEQKRKIEQIAQLQKEQKQYENKIINSKNEKNQNQED 294 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 K + + E L + E+++ ++ +K Sbjct: 295 QKKHKKQLDQINEDLKVQEEQQIQLEHDIKN 325 >gi|41408720|ref|NP_961556.1| hypothetical protein MAP2622 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397078|gb|AAS04939.1| hypothetical protein MAP_2622 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 314 Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 7/122 (5%) Query: 21 RHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 R +P + Y+ +L K ++LI +++++RA+RN + Q+ V LK+E + Sbjct: 71 RGYDPAAVDAYVEALLAKQKLLIDEVQNLRAQRNESGDQLAAL-----RIEVACLKDEVA 125 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 L + P +H + L++ + I + E S + L Sbjct: 126 HLSDTSPTPYAIQHRMTKMLRRTLEEISRMQAEAQAEAESMIAAAAAQVEASHREHQELL 185 Query: 139 RE 140 + Sbjct: 186 AD 187 >gi|312374046|gb|EFR21695.1| hypothetical protein AND_16517 [Anopheles darlingi] Length = 1229 Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 67/205 (32%), Gaps = 24/205 (11%) Query: 5 QWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 I +N E L ++ + + I+ +DE L +IE +R N+ Sbjct: 355 NLIMENNEL----LATKNALNIVKDDLIVKVDE----LTGEIEILREELNAV-------- 398 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + + LK + + L+E+L + + + SS + Sbjct: 399 ----ILARNKLKAKVTELEEELKKTKAQVKQASSSANDQEEEGDVPMAQRKRFTRVEMAR 454 Query: 123 ILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGAR-FSVLTGHLAHLERALGQF 181 +L+ K + L ++ E + + K S + + + +R + Sbjct: 455 VLMERNQYKERFMEL-QDAVRWTEMMRASRVETLDKKSKQGIWKFFSNLFSSNDRPTSES 513 Query: 182 MIDLHTSEHGYTEVSAPLLVRDEAM 206 LH +H Y + V+ + Sbjct: 514 PGRLHQHQHRYGGGVSAQPVQASLL 538 >gi|224073870|ref|XP_002187950.1| PREDICTED: centrosomal protein 110kDa [Taeniopygia guttata] Length = 2353 Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 5/99 (5%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIG--QAIAEGNLSLVDALKNETSTLKEQLPILE 88 + LD KN L +++E + ++ S +A+I Q +G ++ LK E + L++QL ++E Sbjct: 1840 VELDVKN--LEQEVELLSKQKKSLNAEIVAVQEDLQGKKEELETLKAELNDLRQQLHLVE 1897 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 ++ E S ++ + EE+ + R Sbjct: 1898 -QDLENNSKQQEELLREQTALKEEIREYLRKCKECQERH 1935 >gi|229916529|ref|YP_002885175.1| RNA polymerase, sigma-24 subunit, ECF subfamily [Exiguobacterium sp. AT1b] gi|229467958|gb|ACQ69730.1| putative RNA polymerase, sigma-24 subunit, ECF subfamily [Exiguobacterium sp. AT1b] Length = 423 Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 30/275 (10%), Positives = 70/275 (25%), Gaps = 31/275 (11%) Query: 114 PIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAH 173 + + + + + + + D + + + G + Sbjct: 1 MVIDDRSIDQFDTIWNEHYGKVFATCMRYVHHIET-AEDLTQDVFETAFSHWMKKGVPTY 59 Query: 174 --------LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDG 225 + Y + LV+ Q +DM Sbjct: 60 PSSWLIKVATYKAIDDLRRTKNFNQKYEVLKTEYLVKQNFASQIEQDADVGNDMLRLMLM 119 Query: 226 RWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE 285 S+ +L L++ + A + + ++ K + Sbjct: 120 SCHPSLSKE-----------SQVALTLKYVCGLTTHDI-ASAYLTSEVTISQRILRAKKK 167 Query: 286 L------VSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACK-TYDLE 338 + + E+ +L + L+ L DL + + DL Sbjct: 168 IQRLSIPFHLPDPENDDQHLNSVLQTIYLMFNEGYLNSSGHQLVRHDLCHESMRLGMDLS 227 Query: 339 VWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNS 373 VW G E+ S + FQ+ R+++R+ Sbjct: 228 VWRPGHA---EVESLNALMCFQASRLSTRFNREGE 259 >gi|298207258|ref|YP_003715437.1| glutamyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] gi|83849894|gb|EAP87762.1| glutamyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] Length = 1146 Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 14/101 (13%) Query: 10 NPEHLDIALKK-----RHLEPQSEYILSL----DEKNRILIK--KIEDIRARRNSNSAQI 58 N E L L+K ++ E E +L L + + L +E + ++ S Sbjct: 613 NKEELSEKLEKLAKQNQNEEKNLEQLLELTKRYYVEKKALKVAEDLEKLAQKQEELSKND 672 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 G E + L E L+E L LE+E ++ + Sbjct: 673 GD---ENTKEAQEELNKEFKKLQEDLKDLEEENKDLKEPMD 710 >gi|322788429|gb|EFZ14100.1| hypothetical protein SINV_15111 [Solenopsis invicta] Length = 2208 Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 7/75 (9%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 KR +L K + L K+ E+++ S + Q+ S + E Sbjct: 613 SKRRKNVDVNSLL----KTKKLPKESEELKTSNKKASKERHQSKK---DSEIVRSAKEAK 665 Query: 79 TLKEQLPILEKEEHE 93 K++ E++ Sbjct: 666 ENKKRKEDFEEDYEP 680 >gi|313225548|emb|CBY07022.1| unnamed protein product [Oikopleura dioica] Length = 2355 Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 5/79 (6%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 + LD K R L +K+ED N A LK + L+ L +EKE Sbjct: 901 IELDSKIRELQEKLEDEEEMNNEL-----VAKKRKLEDESSELKKDIDDLELTLAKIEKE 955 Query: 91 EHEVCSSLKKLISCIPNVP 109 +H + K + + ++ Sbjct: 956 KHATENKSKNVTEELASIT 974 >gi|291001661|ref|XP_002683397.1| predicted protein [Naegleria gruberi] gi|284097026|gb|EFC50653.1| predicted protein [Naegleria gruberi] Length = 677 Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 73/253 (28%), Gaps = 9/253 (3%) Query: 18 LKKRHLEPQSEYI-LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALK 74 KKR + + E + +D + + +E R ++ + + Q + LK Sbjct: 116 QKKRDMLVKIENLHTEIDTLRKRKEQALETQREKKKEFNQKTKQLVTTEKEYLEKEAELK 175 Query: 75 NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 E + +L ++ + + L+K I + E + E+ + Sbjct: 176 KEVEKWEAELAKVKDQYRKEEEELEKKIQSVDVKLQETKQKYNESRESFEQLRKSRDSEI 235 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 S + + D + + A+ L E+ L Q + E Sbjct: 236 GGPSLDEKYREHDSLVEDIYKLEAMLEAQKLAEDYFLKQAEKLLSQHEQKILKEHEQDLE 295 Query: 195 VSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRF 254 + +++ + T+E + EI + Sbjct: 296 EFNNNSAKRKSV------SDEEKKKQLQKKKQNRYGTAEHFMLRKVKAEIDMTNQFIEMA 349 Query: 255 TTLAPSFRSEAGS 267 PSF + GS Sbjct: 350 KGFTPSFNNIIGS 362 >gi|160893476|ref|ZP_02074261.1| hypothetical protein CLOL250_01027 [Clostridium sp. L2-50] gi|156864871|gb|EDO58302.1| hypothetical protein CLOL250_01027 [Clostridium sp. L2-50] Length = 883 Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 42/147 (28%), Gaps = 6/147 (4%) Query: 36 KNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 K R + +I+ ++ +S QI + + L ++ L + + E +V Sbjct: 20 KWRNALAEIKALKKEASSLKKQITELKKKN-----TDLSDKIKQLNAEKKTVNAELAKVN 74 Query: 96 SSLKKLISCIPNVPLEEVPIGTSANENILIRSVG-KKPSAIHLSREHFEIGEALGLMDFD 154 +KKL L + K + + + + ++ Sbjct: 75 RQMKKLREDAAGGCLMADLARLQERQFERKTEWMFWKADPSPEQNDELKYIQEIRFLEEK 134 Query: 155 RATKLSGARFSVLTGHLAHLERALGQF 181 R +L L ++ Sbjct: 135 RPLVSIIVLNQNGKKNLERLMKSFVNC 161 >gi|119597930|gb|EAW77524.1| hCG40688, isoform CRA_b [Homo sapiens] Length = 352 Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 41/131 (31%), Gaps = 2/131 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 166 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 225 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 E H++ L + + + + E + + + + + Sbjct: 226 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQMV 285 Query: 150 LMDFDRATKLS 160 + + ++L Sbjct: 286 EENNELQSRLD 296 >gi|74203133|dbj|BAE26252.1| unnamed protein product [Mus musculus] Length = 737 Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 8/86 (9%) Query: 5 QWIRQNPEHLDIAL--KKRHLEPQSEYILSLD------EKNRILIKKIEDIRARRNSNSA 56 + +R+ E + K + E + LD ++ L K+ ++++ R + Sbjct: 634 KTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEK 693 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKE 82 +I + + L+E Sbjct: 694 KIDYFERAKREEELREYQERVKKLEE 719 >gi|70941638|ref|XP_741083.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56519234|emb|CAH86301.1| hypothetical protein PC301935.00.0 [Plasmodium chabaudi chabaudi] Length = 498 Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 14/116 (12%) Query: 3 DIQWIRQNPEHLDIALKK-------RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 DIQ I N +++ ++ + ++ + I EK R +K + D + R N Sbjct: 15 DIQIISNNLSNIENRIETSKYGCLSKKIDNAKDEI----EKGREELKTLYDDQKRLNEII 70 Query: 56 AQIGQAIAE---GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 ++ + I + + LK+ LK ++ LE EE++ + L+ I N Sbjct: 71 RKLEKDITDYENNKDKKEEDLKDSVKKLKNKIKQLETEENKKKEQVDDLLMQIENF 126 >gi|332819931|ref|XP_003310451.1| PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Pan troglodytes] Length = 336 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 11/114 (9%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 N + + L+++ E + I+ ++ L+K+ ++A Sbjct: 27 NNDAVLKRLEQKGAEA--DQIIEYLKQQVSLLKEKAILQATLKEEKKL---------RVE 75 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 LK E LK++L E + N + E I ++ + Sbjct: 76 NAKLKKEIEELKQELIQAEIQNGVKQIPFPSGTPLQANSMVSENVIQSTPVTTV 129 >gi|323466443|gb|ADX70130.1| DNA topoisomerase (ATP-hydrolyzing) ParC [Lactobacillus helveticus H10] Length = 818 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 22/110 (20%) Query: 2 LD--IQWIR--QNPEHLDIALKKRHL------------------EPQSEYILSLDEKNRI 39 LD I+ IR +N L ++ +++ K Sbjct: 388 LDQVIKTIRASKNKADAKKNLIAKYKFTANQAEAIVSLQLYRLTNTDVNELIAEQSKLNK 447 Query: 40 LIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 L +K + A R + +I + ++ + E S ++ I EK Sbjct: 448 LAEKYRKLLADRKTLEKEIIKELSAVKKEFASPRRTEISEESAKVKIDEK 497 >gi|317055716|ref|YP_004104183.1| glycyl-tRNA synthetase [Ruminococcus albus 7] gi|315447985|gb|ADU21549.1| glycyl-tRNA synthetase [Ruminococcus albus 7] Length = 461 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 171 TAQGIFVNFANIQRTTRKKVPFGVAQVGKSFRNEI----TPGNFIFRVREFEQMELEFFC 226 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + S + L L++ + R+ +L F + T D E + Sbjct: 227 KPGTDLEWFDYWRSFCKNFLLSLNIKEENLRLRDHSAEELCFYSKATTDFEYLFPF--GW 284 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 285 GELWGVADRTDY 296 >gi|288554281|ref|YP_003426216.1| hypothetical protein BpOF4_06320 [Bacillus pseudofirmus OF4] gi|288545441|gb|ADC49324.1| hypothetical protein BpOF4_06320 [Bacillus pseudofirmus OF4] Length = 228 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 35/88 (39%), Gaps = 7/88 (7%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 + I+ + E ++ L + + + + E+ L+ E I +N + +IGQ Sbjct: 64 IQIKEANEELEQVNTQLAD--EKGKLDKLNQEHEEVLALVSDKESIENEKNDLTKEIGQ- 120 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEK 89 + + + + S + +L L + Sbjct: 121 ----QEAALADIMQKISDSESKLDQLNE 144 >gi|221508386|gb|EEE33973.1| intersectin, putative [Toxoplasma gondii VEG] Length = 1267 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 10/119 (8%) Query: 23 LEPQSEYILSLDEKNRILIKKIE-DIRARRNSNSAQIG-----QAIAEGNLSLVDALKNE 76 ++ +E I E+ R L +E ++ A + + QI E ++ LK E Sbjct: 662 VDGDAEEI----EEVRELRILLEAELLAEKKELARQIDRKRDFALQLEDEKVKLEQLKEE 717 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 ++ + +E++ L L + ++ + + + + + + Sbjct: 718 RKKIEFERIGIERDLSHYVEELLFLRGQVDDMQRDIDALHQANQTLVATHRHQQIQAQN 776 >gi|221486630|gb|EEE24891.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 1267 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 10/119 (8%) Query: 23 LEPQSEYILSLDEKNRILIKKIE-DIRARRNSNSAQIG-----QAIAEGNLSLVDALKNE 76 ++ +E I E+ R L +E ++ A + + QI E ++ LK E Sbjct: 662 VDGDAEEI----EEVRELRILLEAELLAEKKELARQIDRKRDFALQLEDEKVKLEQLKEE 717 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 ++ + +E++ L L + ++ + + + + + + Sbjct: 718 RKKIEFERIGIERDLSHYVEELLFLRGQVDDMQRDIDALHQANQTLVATHRHQQIQAQN 776 >gi|237834211|ref|XP_002366403.1| hypothetical protein, conserved [Toxoplasma gondii ME49] gi|211964067|gb|EEA99262.1| hypothetical protein, conserved [Toxoplasma gondii ME49] Length = 1267 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 10/119 (8%) Query: 23 LEPQSEYILSLDEKNRILIKKIE-DIRARRNSNSAQIG-----QAIAEGNLSLVDALKNE 76 ++ +E I E+ R L +E ++ A + + QI E ++ LK E Sbjct: 662 VDGDAEEI----EEVRELRILLEAELLAEKKELARQIDRKRDFALQLEDEKVKLEQLKEE 717 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 ++ + +E++ L L + ++ + + + + + + Sbjct: 718 RKKIEFERIGIERDLSHYVEELLFLRGQVDDMQRDIDALHQANQTLVATHRHQQIQAQN 776 >gi|168212682|ref|ZP_02638307.1| hypothetical protein AC5_0440 [Clostridium perfringens CPE str. F4969] gi|170715805|gb|EDT27987.1| hypothetical protein AC5_0440 [Clostridium perfringens CPE str. F4969] Length = 203 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 9/79 (11%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 23 LEPQSEYI------LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 + P+ + + L + + + + ++++ ++ N S ++ + L + A K E Sbjct: 40 VAPKVDELEYKIPALKNNTELKSIQEEVDKLQNENNDLSKEV--EDKQKELDNLRAKKEE 97 Query: 77 TSTLKEQLPILEKEEHEVC 95 + + ++ +E + Sbjct: 98 QAKIAQEESKKSEENSKNK 116 >gi|156121261|ref|NP_001095778.1| leucine rich repeat (in FLII) interacting protein 1 [Bos taurus] gi|151555732|gb|AAI49139.1| LRRFIP1 protein [Bos taurus] gi|296488790|gb|DAA30903.1| leucine rich repeat (in FLII) interacting protein 1 [Bos taurus] Length = 518 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 7/82 (8%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN---- 66 + ALK+R E E I L +K I++I D++ +IG + Sbjct: 240 FAEVKEALKQR--EEMLEEIRQLQQKQASYIREISDLQETIEWKDRKIGALERQKEFFDS 297 Query: 67 -LSLVDALKNETSTLKEQLPIL 87 S D L+ E LKE+L Sbjct: 298 VRSERDDLREEVVMLKEELKKH 319 >gi|507130|emb|CAA51437.1| emm64 [Streptococcus pyogenes] Length = 528 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 28/113 (24%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILS---------------LDEKNRILIKKIEDI 47 D+ R+ + ++ L +L + + + LD R K++E Sbjct: 334 DLNASREAKKQVEKDLA--NLTAELDKVKEEKQISDASRQGLRRDLDAS-REAKKQVEKA 390 Query: 48 RARRN-------SNSAQIGQAIAEGNLSLVD---ALKNETSTLKEQLPILEKE 90 N + +G++ E + L+ E LKEQL +E Sbjct: 391 LEEANRKLAALEKLNKVLGESKKETQKEKAELQAKLEAEAKALKEQLAKQAEE 443 >gi|221506624|gb|EEE32241.1| hec1 protein, putative [Toxoplasma gondii VEG] Length = 669 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 4/109 (3%) Query: 26 QSEYILSLDEKNRIL----IKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 E + ++ R K+I+ ++RRN+ ++I Q AE K E ++ Sbjct: 328 DLEKLKDGIKQQRSASEQQEKEIDAKQSRRNALQSEIRQVAAETQQLDAQLSKAEVEKIR 387 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 ++ +L + ++ + V E G V Sbjct: 388 SEIHVLRERVALRSKDVEGQQLQLAGVEDEINRRGEELRVTTRTLGVPW 436 >gi|254173107|ref|ZP_04879781.1| conserved hypothetical protein [Thermococcus sp. AM4] gi|214033263|gb|EEB74091.1| conserved hypothetical protein [Thermococcus sp. AM4] Length = 301 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 50/142 (35%), Gaps = 14/142 (9%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 +PE + +KK I +L+++ + K+E++ Q + Sbjct: 7 DPEEIK-RIKK--------EIEALEKERNEIRAKLEELEKEL-----QSWIQKRDEKNRE 52 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 V L+ + KE+ + + ++ + +++ + + + E + T +E +R + Sbjct: 53 VQQLRQKGREYKEKRDEINAQIKQLKKNREEINAKLDLLYQEILEYRTKRDEYNQLRRLN 112 Query: 130 KKPSAIHLSREHFEIGEALGLM 151 I E E Sbjct: 113 MPAEKIKERIEKLEWELQTNPK 134 >gi|260794880|ref|XP_002592435.1| hypothetical protein BRAFLDRAFT_67302 [Branchiostoma floridae] gi|229277654|gb|EEN48446.1| hypothetical protein BRAFLDRAFT_67302 [Branchiostoma floridae] Length = 1338 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 30/96 (31%), Gaps = 8/96 (8%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL--------VDALKNETSTLKEQ 83 L+++ R + +++A A + + ++ L E LK Sbjct: 257 ELEQERRRWETEKAELQASVKKLQKMEANARKDKSKEDSVVSLKRKLETLMQENRKLKSN 316 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 L + S L +L + + + ++ Sbjct: 317 LTESNTTAAVLKSELTQLQAELEEKCEDLDRWERNS 352 >gi|189234525|ref|XP_976164.2| PREDICTED: similar to GA10507-PA isoform 4 [Tribolium castaneum] Length = 502 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 32/82 (39%), Gaps = 9/82 (10%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSN---------SAQIGQAIAEGNLSLVDALKNETS 78 E I L+E+ + L E++ R+N S + A + + A + E Sbjct: 298 EMIRRLEEQLKQLQAAKEELEKRQNELQAMMERLEESKNMEAAERQKLEEEIQAKQLEVQ 357 Query: 79 TLKEQLPILEKEEHEVCSSLKK 100 +++++ + E + ++ Sbjct: 358 RIQDEVTAKDNETKRLQEEVEN 379 >gi|149375166|ref|ZP_01892938.1| hypothetical protein MDG893_06094 [Marinobacter algicola DG893] gi|149360530|gb|EDM48982.1| hypothetical protein MDG893_06094 [Marinobacter algicola DG893] Length = 437 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 39/102 (38%), Gaps = 4/102 (3%) Query: 41 IKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 +++D++ + S +G+A +GN + D L E + ++ L+K+ + + + Sbjct: 14 KARLDDLKGTKGRLSRLVGEARKDGNSA--DELIAELQQVSGEIKRLQKQVKKQLNGAQT 71 Query: 101 LISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHF 142 P IG + + V P + + + Sbjct: 72 QEKWAPQPITIPPAIGNTTTAQAV--VVEPCPDSDLHHADAY 111 >gi|145521847|ref|XP_001446773.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414262|emb|CAK79376.1| unnamed protein product [Paramecium tetraurelia] Length = 1295 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 13/110 (11%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRI-----------LIKKIEDIRARRNSNSAQIGQAIA 63 K++ ++ Q E + + D +NR KK++++ RN ++ Sbjct: 299 KAKQKRQSIKVQIEELQAKDTQNRDEVNNLTSQQNRFQKKLDELIQERNKCIDEVEDLKK 358 Query: 64 E--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 E + L+ E L+E + + ++ + L + S + N+ E Sbjct: 359 EIPAYEKSIKTLRQEKEELEEVVQKMNQQHQQQVRKLVEKKSSLQNIISE 408 >gi|319940338|ref|ZP_08014688.1| general stress protein GSP-781 [Streptococcus anginosus 1_2_62CV] gi|319810394|gb|EFW06736.1| general stress protein GSP-781 [Streptococcus anginosus 1_2_62CV] Length = 408 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNETSTLKEQLPI 86 I SL+++ + +++ I+A+ +S +Q + AE + L E TL + + Sbjct: 40 KINSLNDQQKSAQAQVDQIQAQVSSIQSQQEKLKAENEKLQAESTKLSAEIETLSKNIVA 99 Query: 87 LEK 89 + Sbjct: 100 RNE 102 >gi|319957316|ref|YP_004168579.1| bacterial peptide chain release factor 2 (brf-2) [Nitratifractor salsuginis DSM 16511] gi|319419720|gb|ADV46830.1| bacterial peptide chain release factor 2 (bRF-2) [Nitratifractor salsuginis DSM 16511] Length = 372 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 6/203 (2%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRIL---IKKIEDIRARRNSNSAQIGQAIA 63 IR+ + ++ + S+ + ++ L + K ++ +A A + Sbjct: 29 IRKRLDEIEEMQQNPEFWTDSDRAAKISQEKTRLERTLAKYDEAKAALEDAQEYFELAKS 88 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 EG+ ++ L +E LKE + LE + A+ Sbjct: 89 EGDEETLEMLYDEAENLKEHIQQLEVAIMLSGEHDSANAIVTIHPGAGGTESQDWASMLY 148 Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 + + + ++ GE G+ D K A + + + R + Sbjct: 149 RMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLKVENG--IHRLVRISPF 206 Query: 184 DLHTSEH-GYTEVSAPLLVRDEA 205 D + H +T V + D+ Sbjct: 207 DANAKRHTSFTSVMVSPEINDDI 229 >gi|315222408|ref|ZP_07864312.1| CHAP domain protein [Streptococcus anginosus F0211] gi|315188493|gb|EFU22204.1| CHAP domain protein [Streptococcus anginosus F0211] Length = 407 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNETSTLKEQLPI 86 I SL+++ + +++ I+A+ +S +Q + AE + L E TL + + Sbjct: 40 KINSLNDQQKSAQAQVDQIQAQVSSIQSQQEKLKAENEKLQAESTKLSAEIETLSKNIVA 99 Query: 87 LEK 89 + Sbjct: 100 RNE 102 >gi|311260887|ref|XP_003128566.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger domain protein 1A [Sus scrofa] Length = 1675 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 751 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 808 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + + ++ Sbjct: 809 EDEQRNSVADVSIGEEEREDF 829 >gi|302918449|ref|XP_003052657.1| hypothetical protein NECHADRAFT_20598 [Nectria haematococca mpVI 77-13-4] gi|256733597|gb|EEU46944.1| hypothetical protein NECHADRAFT_20598 [Nectria haematococca mpVI 77-13-4] Length = 1109 Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 17 ALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 AL+ R SE + L+ + R ++E +++ + +I ++AE DAL++E Sbjct: 678 ALRAR---VASERLPILEARRREQTVRLEHLQSEVVRITKEIQDSLAEEERLKQDALQSE 734 Query: 77 TS 78 + Sbjct: 735 SE 736 >gi|304314787|ref|YP_003849934.1| TOPRIM domain-containing protein [Methanothermobacter marburgensis str. Marburg] gi|302588246|gb|ADL58621.1| TOPRIM domain-containing protein [Methanothermobacter marburgensis str. Marburg] Length = 280 Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 45/112 (40%), Gaps = 25/112 (22%) Query: 2 LDIQWIRQNPE--HLDIALKK-------RHLEPQSEYILSLDEKNRILIKKIEDIRAR-- 50 LD IR+ E + L+ R+++ E +++ ++ A Sbjct: 103 LDPDLIREEIENAIIRAGLQTLSGVKNLRNMKESLEE----------CQERLNELVAENS 152 Query: 51 --RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 R+ N +G+ E ++LK E L+E+L +LE++ + + + Sbjct: 153 ALRDENIKLLGEV--EDGEREAESLKEEIKVLEEKLKVLEEDYSRIKTRFSE 202 >gi|160947159|ref|ZP_02094326.1| hypothetical protein PEPMIC_01091 [Parvimonas micra ATCC 33270] gi|158446293|gb|EDP23288.1| hypothetical protein PEPMIC_01091 [Parvimonas micra ATCC 33270] Length = 572 Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 4/126 (3%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIAE--GNLSLVDALKNETSTLKE-QLPILEKE 90 D++ R +K++E + + S+ + + V+ +K+E L +L L++E Sbjct: 156 DDEFRKKLKELEMLYDKIKKASSNFKKLKNKVSNFDENVEEIKSEIEELNSLELETLDEE 215 Query: 91 EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 E I V + N + SV + + + E + L Sbjct: 216 FIENEIDKFNNSQTILGCCGNLVELFDGENSEVNAFSVLNEINRNIIILEENDKNVKL-S 274 Query: 151 MDFDRA 156 DF+ Sbjct: 275 EDFENI 280 >gi|116872720|ref|YP_849501.1| DNA topoisomerase IV subunit A [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741598|emb|CAK20722.1| DNA topoisomerase IV, A subunit [Listeria welshimeri serovar 6b str. SLCC5334] Length = 819 Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 9/92 (9%) Query: 2 LD--IQWIRQNPEHLDIALKKR----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR + + D L + E Q+E I+SL + R+ I ++++ + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTTYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKELA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK+E + +K++ Sbjct: 448 DQISVLEKILGDESELIAVLKSELADIKKKYK 479 >gi|55622|emb|CAA36264.1| alpha-internexin [Rattus norvegicus] Length = 500 Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 88 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 145 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 146 ELRELRGELEEASSA 160 >gi|74830387|emb|CAI39060.1| Structural maintenance of chromosomes 3 [Paramecium tetraurelia] Length = 1287 Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 13/110 (11%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRI-----------LIKKIEDIRARRNSNSAQIGQAIA 63 K++ ++ Q E + + D +NR KK++++ RN ++ Sbjct: 299 KAKQKRQSIKVQIEELQAKDTQNRDEVNNLTSQQNRFQKKLDELIQERNKCIDEVEDLKK 358 Query: 64 E--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 E + L+ E L+E + + ++ + L + S + N+ E Sbjct: 359 EIPAYEKSIKTLRQEKEELEEVVQKMNQQHQQQVRKLVEKKSSLQNIISE 408 >gi|313619190|gb|EFR90963.1| DNA topoisomerase IV, A subunit [Listeria innocua FSL S4-378] Length = 762 Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 9/92 (9%) Query: 2 LD--IQWIRQNPEHLDIALKKR----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR + + D L + E Q+E I+SL + R+ I ++++ + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTTYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKELA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI LV LK+E + +K++ Sbjct: 448 EQISVLEKILGDEAELVAVLKSELADIKKKYK 479 >gi|281341799|gb|EFB17383.1| hypothetical protein PANDA_012407 [Ailuropoda melanoleuca] Length = 516 Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 44/87 (50%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R +L +++ + L ++IE+ +A+R A + QA +G +L DA K Sbjct: 325 DNLRNRK-----NEVLEMNKLIQRLQQEIENTKAQRCKLEAAVTQAEQQGEAALSDA-KC 378 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 379 KLAGLEEALQKAKQDMACLVKEYQEVM 405 >gi|300777704|ref|ZP_07087562.1| possible antirepressor [Chryseobacterium gleum ATCC 35910] gi|300503214|gb|EFK34354.1| possible antirepressor [Chryseobacterium gleum ATCC 35910] Length = 663 Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 25/68 (36%), Gaps = 5/68 (7%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAE-----GNLSLVDALKNETSTLKEQLPILEKEEHE 93 L K +++ N S ++ + E + ++ L +E + ++ L + + Sbjct: 327 KLKAKSAELQKELNQKSKELSKLKPETSAFDKKIEEINLLASEMGKIGDETSRLVDQYFK 386 Query: 94 VCSSLKKL 101 K+ Sbjct: 387 SPEWKNKM 394 >gi|118365997|ref|XP_001016217.1| Protein kinase domain containing protein [Tetrahymena thermophila] gi|89297984|gb|EAR95972.1| Protein kinase domain containing protein [Tetrahymena thermophila SB210] Length = 1504 Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 55/161 (34%), Gaps = 11/161 (6%) Query: 5 QWIRQNPEHLD----IALKKRHLEPQSEYILSL------DEKNRILIKKIEDIRARRNSN 54 + + + E + LKK+ + + L +E+ R L +K E + A + Sbjct: 825 KQLEEEQEKIKKLQEELLKKKKEDEEITKQKQLQDQKAKEEEIRQLKEKQEQL-AEQERK 883 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 +I + +ALKN+ ++E+ E++ + ++ + + Sbjct: 884 QKEIAAELERKEKLAQEALKNQQLQIQEEARKKEEQMLQELKKKEEELQKQKEQAELDRK 943 Query: 115 IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDR 155 E R + L ++ + E D ++ Sbjct: 944 KKQEELEQQRQREQEEIQKKQELLKQKEQELEKQKKADEEK 984 >gi|20089563|ref|NP_615638.1| hypothetical protein MA0678 [Methanosarcina acetivorans C2A] gi|19914478|gb|AAM04118.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 320 Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 6/70 (8%) Query: 26 QSEYILS----LDEKNRILIKKIEDIRARRNSNSAQIG--QAIAEGNLSLVDALKNETST 79 + + L+++ + + K + +R +R+ + QIG + S L + + Sbjct: 54 DIDELKEKRDALNQQVKERVAKAQSLRDQRDEINKQIGEYKEKRSDVNSKTQELFSGIAD 113 Query: 80 LKEQLPILEK 89 LKE+ K Sbjct: 114 LKEKRDECNK 123 >gi|313623959|gb|EFR94061.1| DNA topoisomerase IV, A subunit [Listeria innocua FSL J1-023] Length = 818 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 9/92 (9%) Query: 2 LD--IQWIRQNPEHLDIALKKR----HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR + + D L + E Q+E I+SL + R+ I ++++ + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTTYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAKELA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI LV LK+E + +K++ Sbjct: 448 EQISVLEKILGDEAELVAVLKSELADIKKKYK 479 >gi|268608254|ref|ZP_06141981.1| glycyl-tRNA synthetase [Ruminococcus flavefaciens FD-1] Length = 468 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 172 TAQGIFVNFANIQRTTRKKVPFGVAQVGKSFRNEI----TPGNFIFRVREFEQMELEFFC 227 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + S + L L L + L D L F + T D E + Sbjct: 228 KPGTDLEWFDYWRSYCKNFLLSLGLKEENIRLRDHDKEELCFYSKATTDFEYLFPF--GW 285 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 286 GELWGVADRTDY 297 >gi|145474561|ref|XP_001423303.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124390363|emb|CAK55905.1| unnamed protein product [Paramecium tetraurelia] Length = 1491 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 35/114 (30%), Gaps = 3/114 (2%) Query: 9 QNPEHLDIA--LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG- 65 N + K + + I S+ EKN+ L + A +I Q ++ Sbjct: 1245 TNFKEFKEKYDQMKVQEKQIQDEIKSIQEKNKQLKQDNTRKDANIKELRDKIDQLQSQKP 1304 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N + L + LK+++ ++ ++ + + Sbjct: 1305 NDTEKSDLIQQVKKLKDEINRKDQAIKHFRQKFEEKSNEFEIYKNDYASKYAQT 1358 >gi|119357615|ref|YP_912259.1| uncharacterized protein involved in exopolysaccharide biosynthesis-like [Chlorobium phaeobacteroides DSM 266] gi|119354964|gb|ABL65835.1| uncharacterized protein involved in exopolysaccharide biosynthesis-like protein [Chlorobium phaeobacteroides DSM 266] Length = 764 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 46/160 (28%), Gaps = 16/160 (10%) Query: 7 IRQNP-EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA---- 61 + N E ++K + S+ +L L + + L+ +I I A+ N + +I A Sbjct: 160 LLNNFMEVFLEKVRKGNEMQDSDRLLYLRNEKQSLLTEILAIEAKLNILTKEISTADYAE 219 Query: 62 ---IAEGNLSLVDAL--KNETSTLKEQLPILEKEEHEVC------SSLKKLISCIPNVPL 110 +A + L L + LE E+ + + + Sbjct: 220 TYNVASKKTEELQRLYVNAFVDRLATENQFLEVEKSGRELQSLSLDPMVEEMVMGDQSLD 279 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGL 150 + + + G P+ + Sbjct: 280 FTSSWTYQQQQQLRSTTDGLTPNNPDRIYVEQRMKAMQNY 319 >gi|129277515|ref|NP_001076085.1| keratin, type II cuticular Hb2 [Bos taurus] gi|126717475|gb|AAI33394.1| KRT82 protein [Bos taurus] gi|296487873|gb|DAA29986.1| keratin 82 [Bos taurus] Length = 514 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L + IE+++A+R A + QA +G +L DA K Sbjct: 325 DNLRNRK-----NEILEINKLIQRLQQDIENVKAQRCKLEAAVTQAEQQGEAALNDA-KC 378 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 379 KLAGLEEALQKAKQDMACLLKEYQEVM 405 >gi|118369933|ref|XP_001018169.1| hypothetical protein TTHERM_00283130 [Tetrahymena thermophila] gi|89299936|gb|EAR97924.1| hypothetical protein TTHERM_00283130 [Tetrahymena thermophila SB210] Length = 756 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 36/280 (12%), Positives = 88/280 (31%), Gaps = 23/280 (8%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRI----LIKKIEDIRARRN------ 52 D++ ++N + + A+ R+ + Y+ L + I K++ +RA R Sbjct: 105 DLKTAQENLDKV--AIFYRYYKLSLYYLKQLIQIWNINFCIKKAKLKFLRAEREAQSCQI 162 Query: 53 -----SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 S I + +E L +Q E + + ++ I N Sbjct: 163 QDEILKLSQDISSEKRQKQAQKTKQCLSEVKELDQQYKYYLLEFNNTLDLFYEQMNRIQN 222 Query: 108 VPLEEVPIGTSANENILIRSVGKKPSAIHLSREHF-EIGEALGLMDFDRATK--LSGARF 164 + + ++ +++++ + S I I E LG ++ + + +S + Sbjct: 223 SLQDYECQRINQMKDSVMKNLVFETSYIKNIEYDIDNISEKLGQVEAQKDVQEIISRNQS 282 Query: 165 SVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFA---DDMFC 221 E + + + E Y +++ ++ + Y T P+ D + Sbjct: 283 KRPKQEQIKYEPYISFIGKTIQSLELKYKKLNTEDVIEEYLSYKTNPQPQSEFASDQLNQ 342 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSF 261 + + S + +F F Sbjct: 343 ELKSQCDAIYRQYQEILQDSDKEKAFFDDFEQFVCQNFLF 382 >gi|15789609|ref|NP_279433.1| chromosome segregation protein [Halobacterium sp. NRC-1] gi|169235321|ref|YP_001688521.1| chromosome segregation protein [Halobacterium salinarum R1] gi|10579965|gb|AAG18913.1| chromosome segregation [Halobacterium sp. NRC-1] gi|167726387|emb|CAP13170.1| chromosome segregation protein [Halobacterium salinarum R1] Length = 1190 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNETSTLKEQLP 85 + + D + R + +I+ R R ++ I + + + + ++E + ++ ++ Sbjct: 337 DRVQDADAERREAVVEIDRKRERIDALETDIREVKVQKASVTAEIQERRDELADIEAEIE 396 Query: 86 ILEKEEHEVC 95 ++ E E+ Sbjct: 397 SVDTEFDELK 406 >gi|313004736|emb|CBJ25100.1| C. elegans protein C34E11.3b, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|313006902|emb|CBJ25061.1| C. elegans protein C34E11.3b, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|313006918|emb|CBJ25079.1| C. elegans protein C34E11.3b, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1593 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 10/122 (8%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILI----KKIEDIRARRNSNSAQIGQ 60 + +R E L +++ LE + + + K + L + E + RN S Sbjct: 844 KKLRAETELLRKDMQE--LETDKKTVKEFEIKYKKLESIFETEREKMNGERNR-SKNELA 900 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ + + LK + K+ + E+ ++ K + +P E ++A Sbjct: 901 AMKKLKDDAEEHLKKLSDDQKKNDAAWKIEKSKLE---KDIALLKKQLPDEHEMKESTAT 957 Query: 121 EN 122 Sbjct: 958 PQ 959 >gi|301775733|ref|XP_002923287.1| PREDICTED: keratin, type II cuticular Hb2-like [Ailuropoda melanoleuca] Length = 517 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 44/87 (50%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R +L +++ + L ++IE+ +A+R A + QA +G +L DA K Sbjct: 325 DNLRNRK-----NEVLEMNKLIQRLQQEIENTKAQRCKLEAAVTQAEQQGEAALSDA-KC 378 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 379 KLAGLEEALQKAKQDMACLVKEYQEVM 405 >gi|183233054|ref|XP_651732.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|169801758|gb|EAL46345.2| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS] Length = 539 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 43/97 (44%), Gaps = 4/97 (4%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEG 65 RQ E + +K R + + +YI + + +IK+ E++ ++ + I + + + Sbjct: 238 RQQVEDILQKIKTRIEKVE-DYINEGKNELKEMIKEKEELMKKQKTLERQKIIREKVKDI 296 Query: 66 NLSLVDALKNETSTLKE-QLPILEKEEHEVCSSLKKL 101 + + D + LK+ ++ LE + + ++ Sbjct: 297 DANDKDEYIEKLEELKQSEMNKLEGLKQKWTLYEDEM 333 >gi|37805135|gb|AAH60166.1| Rabep1 protein [Mus musculus] Length = 367 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ E L++R E Q E +L+ + + + E +R+ +I + Sbjct: 147 RESAEREIADLRRRLSEGQEEE--NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTE 204 Query: 68 SLVDALKNETSTLKEQLPILEKE--EHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + E S +KE LE E +++ +V E+ + Sbjct: 205 AEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 264 Query: 126 ------RSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + + + + F + L + D R + Sbjct: 265 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIV 304 >gi|89896554|ref|YP_520041.1| hypothetical protein DSY3808 [Desulfitobacterium hafniense Y51] gi|89336002|dbj|BAE85597.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 477 Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 8/77 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYI---LSL-DEKNRILIKKIEDIRARRNSNSAQI 58 D+ I QN E + + R ++ + L D+ + E + A ++ S Sbjct: 193 DLTLILQNKEAVKAGAEARGIKEDVYTVYLNQKLTDKAYKAA---AEVLNADVDAVSKN- 248 Query: 59 GQAIAEGNLSLVDALKN 75 I E +L A K Sbjct: 249 PALIKENEQALEAAAKA 265 >gi|329725453|gb|EGG61936.1| putative glycine--tRNA ligase [Staphylococcus epidermidis VCU144] Length = 310 Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 9/135 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K LP + SFR+E + R +F + EL Sbjct: 22 TAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 77 Query: 291 REEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLEVWLAGQNLY 347 + + + A E L L++ + L D L + T D+E + Sbjct: 78 KPGEEIEWQNYWKTFASEWLTDLNISEDNMRLRDHDEDELSHYSNATTDIEYKFPF--GW 135 Query: 348 REISSCSTCGNFQSR 362 E+ ++ ++ R Sbjct: 136 GELWGIASRTDYDLR 150 >gi|317489504|ref|ZP_07948014.1| chaperone DnaK [Eggerthella sp. 1_3_56FAA] gi|316911433|gb|EFV33032.1| chaperone DnaK [Eggerthella sp. 1_3_56FAA] Length = 600 Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 6/74 (8%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 + ++ A++ +E + D + R + E+ + N +GQ + Sbjct: 487 DDIERAIR------DAEQYAAQDSERREAMLAREEAQGLLNEVDRALGQVGKQLEKDEKK 540 Query: 72 ALKNETSTLKEQLP 85 +K + TL++ L Sbjct: 541 QVKADAETLRKALS 554 >gi|257790060|ref|YP_003180666.1| 2-alkenal reductase [Eggerthella lenta DSM 2243] gi|325830446|ref|ZP_08163903.1| putative chaperone protein DnaK [Eggerthella sp. HGA1] gi|257473957|gb|ACV54277.1| 2-alkenal reductase [Eggerthella lenta DSM 2243] gi|325487913|gb|EGC90351.1| putative chaperone protein DnaK [Eggerthella sp. HGA1] Length = 600 Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 6/74 (8%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 + ++ A++ +E + D + R + E+ + N +GQ + Sbjct: 487 DDIERAIR------DAEQYAAQDSERREAMLAREEAQGLLNEVDRALGQVGKQLEKDEKK 540 Query: 72 ALKNETSTLKEQLP 85 +K + TL++ L Sbjct: 541 QVKADAETLRKALS 554 >gi|182420049|ref|ZP_02951283.1| glycyl-tRNA synthetase [Clostridium butyricum 5521] gi|237669522|ref|ZP_04529502.1| glycine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376086|gb|EDT73673.1| glycyl-tRNA synthetase [Clostridium butyricum 5521] gi|237654966|gb|EEP52526.1| glycine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 463 Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 53/184 (28%), Gaps = 10/184 (5%) Query: 180 QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIP-TSEVSLTN 238 + + + + + F +L P T++ N Sbjct: 124 NEQLKEYIESNNIVCPKCGKMNYTDIRKFNLMFKTFQGVTEDAKSEMYLRPETAQGIFVN 183 Query: 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTE 298 + + K +P + SFR+E R +F + EL + Sbjct: 184 FKAVQRTSRKKVPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFCKPGTDLEW 239 Query: 299 HERMLSCAEEILKRLDLHYRVVSLCTG---DLGFSACKTYDLEVWLAGQNLYREISSCST 355 H+ L L++ + + +L F + T D+E + E+ + Sbjct: 240 HKYWKDYCWNFLLNLNVKPENLRMRDHGEEELSFYSNATSDIEYLFPF--GWGELWGIAD 297 Query: 356 CGNF 359 ++ Sbjct: 298 RTDY 301 >gi|80159816|ref|YP_398560.1| conserved hypothetical phage-related protein [Clostridium phage c-st] gi|78675406|dbj|BAE47828.1| conserved hypothetical phage-related protein [Clostridium phage c-st] Length = 1662 Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 55/167 (32%), Gaps = 6/167 (3%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 ++ I++ E +D R + + + + LD K + + KI+ + + + Sbjct: 1326 LEEIKKKQEDIDQFQHDRDITLRKKNLKEELDAKKKKIQSKIDAENKEYKEAKKRYDREV 1385 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP-----LEEVPIGT 117 + + LK E K + +++ + L K + + I Sbjct: 1386 KALERANKEKLKKENLYAKAREMLMQNNFDTLKDFLIKYGEDSEKIFGVMGETIKKKICD 1445 Query: 118 SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARF 164 + I + S ++ E + D ++ T+++ Sbjct: 1446 NLKNAIDLMQHFNTLSDKKKWKKAVGYDEDYIMGDTEKPTEITHFGN 1492 >gi|225850292|ref|YP_002730526.1| Methyl-accepting chemotaxis protein signaling domain protein [Persephonella marina EX-H1] gi|225646296|gb|ACO04482.1| Methyl-accepting chemotaxis protein signaling domain protein [Persephonella marina EX-H1] Length = 634 Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 10/69 (14%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 + AL+ ++ E LDE+ R IE ++ N +I + + + V +++ Sbjct: 31 EEALQMKNSEID-----QLDEELRNKTSAIEKLKEELNKK-DEIARKMQQ----EVSSIQ 80 Query: 75 NETSTLKEQ 83 + LK++ Sbjct: 81 QQLKQLKDK 89 >gi|221114147|ref|XP_002163621.1| PREDICTED: similar to KIAA1009 protein, partial [Hydra magnipapillata] Length = 829 Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 22/53 (41%) Query: 17 ALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 KK+ E + L+++N L + +D + +N++ +I + Sbjct: 307 NCKKKEAEQLLTMVKKLEDENNELRTEKQDAKTEKNNDGKEISDLKRQIKEME 359 >gi|146420544|ref|XP_001486227.1| hypothetical protein PGUG_01898 [Meyerozyma guilliermondii ATCC 6260] Length = 1058 Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 49/109 (44%), Gaps = 4/109 (3%) Query: 5 QWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 + +++ + L+ +L +P + I DE+ R + ++++ ++ R + + Q Q Sbjct: 246 KELKRQRDEAKKKLQNFNLTTQPLEKQIRQTDEQRRDIHEQLDKLKHRHSLLTTQYKQQT 305 Query: 63 AE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 A+ + LK +L + ++E ++ ++L + +VP Sbjct: 306 AQVREATDKITELKASVESLANKSERRKQEAEKLKQERQELEVKLRSVP 354 >gi|123421283|ref|XP_001305955.1| viral A-type inclusion protein [Trichomonas vaginalis G3] gi|121887503|gb|EAX93025.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3] Length = 2366 Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 59/155 (38%), Gaps = 7/155 (4%) Query: 8 RQNPEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG 65 +++ E + L+ + L+ + L+++ + L K+IED+ +N Q+ + G Sbjct: 1143 KKDLEDVTNELENTQKDLDNSNNKNRDLEKQIKDLKKQIEDLNREKNDLKDQLDTSKLAG 1202 Query: 66 N-----LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + ++D L+ + + L + LE + ++ + +++ Sbjct: 1203 DELSKRDEVLDNLRKQIAELAAKNKDLENKANDNNAEELAAKEAELENINKQLEQTKKEL 1262 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDR 155 K + +E+ ++ + F++ Sbjct: 1263 AERDEELKNAKNENLAKEKENQKLNRENERLKFEQ 1297 >gi|83032912|ref|XP_729246.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23486501|gb|EAA20811.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 938 Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 57/146 (39%), Gaps = 16/146 (10%) Query: 4 IQWIRQNPEHLDIA------------LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR 51 I+ +++ P+ + A +K+ + + + + DE +K+ E+I+ + Sbjct: 54 IKEVKE-PDEIKEANADEIKEVKADEIKEVNEADEIKEVKEADE--IKEVKEAEEIKEVK 110 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLK-EQLPILEKEEHEVCSSLKKLISCIPNVPL 110 ++ +A A+ + E K +++ ++ +E + KK + + + Sbjct: 111 ADEIKEVKEAKADEIKEVKADEIKEVKEAKADEIKEVKADEIKETPIKKKPVKMVSFLLD 170 Query: 111 EEVPIGTSANENILIRSVGKKPSAIH 136 E++ G N + + K + Sbjct: 171 EDMKKGDYFTNNFPEKILQKNNTNDF 196 >gi|328956924|ref|YP_004374310.1| hypothetical protein CAR_c05970 [Carnobacterium sp. 17-4] gi|328673248|gb|AEB29294.1| conserved hypothetical protein [Carnobacterium sp. 17-4] Length = 439 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 39/93 (41%), Gaps = 8/93 (8%) Query: 15 DIALKKRHLEPQS------EYILSLDEKNRILIKKIEDIRARRNS--NSAQIGQAIAEGN 66 L+ + + S E + +L+ + L ++E ++ ++ ++ + + Sbjct: 29 KAELENKSADLNSKIQSQEETLNNLESEKANLESEVEKLQTNIDTVVLELKVQEQKLADS 88 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + ++ LK E LK+ + E++ +++ Sbjct: 89 KAKIEKLKAEIEKLKDLIARREEKLEHQARNVQ 121 >gi|325117847|emb|CBZ53398.1| putative tola protein [Neospora caninum Liverpool] Length = 906 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 5/85 (5%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIR----ARRNSNSAQIGQAIAEGNLSLVDALKN 75 KR + E + L+E L K++E+ + A +N +I N+ L+ Sbjct: 303 KRG-KADRERLKHLEEYKDKLEKQLEETQRTAEAEKNELRKEIAARENSLNVQSAARLRE 361 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKK 100 + + + ++ Sbjct: 362 IQKRISDMEAYYRNKLDVQAEEKRE 386 >gi|319641232|ref|ZP_07995931.1| hypothetical protein HMPREF9011_01528 [Bacteroides sp. 3_1_40A] gi|317387105|gb|EFV67985.1| hypothetical protein HMPREF9011_01528 [Bacteroides sp. 3_1_40A] Length = 843 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 16/166 (9%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL----------KNETS 78 LDE R ++ ++++ + + + + + + + V+ Sbjct: 530 DFSELDELIREADNQVAMLQSQIKALEDENKELLKKISEASVEDAAVYRQQYNANLTRIG 589 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI--GTSANENILIRSVGKKPSAIH 136 LK +L +K++ E + ++ + + I + S S Sbjct: 590 ELKAELAEWQKKQKEYADAKQEAANDNDVPTDDYYRIPAIMQDCKTAYSLSWQDGGSWNG 649 Query: 137 LSREH-FEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 + + G + F ++ + RA+ Q Sbjct: 650 YTFVRKATMPNIDGEITFKATISIARKPKYF---LGIKIHRAIVQI 692 >gi|46199013|ref|YP_004680.1| hypothetical protein TTC0705 [Thermus thermophilus HB27] gi|46196637|gb|AAS81053.1| conserved hypothetical protein [Thermus thermophilus HB27] Length = 411 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 40/87 (45%), Gaps = 6/87 (6%) Query: 15 DIALKKRHLEPQSEY-ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 A + R LE ++ I +L+ + + ++++++ + + +I + + L Sbjct: 32 AQAARARALEEEAAKRIQALNRELAQISQRLKNLLGEKAALEKEIARL-----EAERRRL 86 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKK 100 K ET+ LKE++ E ++ L+ Sbjct: 87 KQETARLKEEVRQTEARIAKLEKDLEA 113 >gi|289578137|ref|YP_003476764.1| glycyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289527850|gb|ADD02202.1| glycyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 462 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 9/135 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + + L L + R +L + T D+E + Sbjct: 231 KPGEDMEWFNYWRKYCMDWLLEFGLKKENLRFRDHKKEELSHYSTATTDIEYNFPF--GW 288 Query: 348 REISSCSTCGNFQSR 362 E+ + +F R Sbjct: 289 GELWGIANRTDFDLR 303 >gi|296815304|ref|XP_002847989.1| dynactin [Arthroderma otae CBS 113480] gi|238841014|gb|EEQ30676.1| dynactin [Arthroderma otae CBS 113480] Length = 1358 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 36/77 (46%), Gaps = 5/77 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED---IRARRNSNSAQIGQAIAE 64 R E + L+++ +PQ + I +L ++ + ++E+ ++A S ++ E Sbjct: 335 RDKFETIIQKLREK-YQPQQQEITTLRKQLKEAEYRVEEVERLQAEHESI-LEMAALDRE 392 Query: 65 GNLSLVDALKNETSTLK 81 + +++K E LK Sbjct: 393 MAEEVAESIKAEYEALK 409 >gi|193216773|ref|YP_002000015.1| massive surface protein MspC [Mycoplasma arthritidis 158L3-1] gi|193002096|gb|ACF07311.1| massive surface protein MspC [Mycoplasma arthritidis 158L3-1] Length = 2719 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 55/147 (37%), Gaps = 1/147 (0%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQAIAEG 65 I+Q E + +L + + +++ L + +E N L I+ A S +IG+ + Sbjct: 1764 IKQELEKIQQSLNDANNDFKNKTDLKVKEEANNKLKDAIDKAEADLASQKNEIGKLKDQT 1823 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 N + E L ++L +K + ++ K + PLE+ + Sbjct: 1824 NKTSASTKIEEVEKLIKRLKDEQKANAQTINTEKTKNEGLVKKPLEDSQKALDKANEAIQ 1883 Query: 126 RSVGKKPSAIHLSREHFEIGEALGLMD 152 +S L+ E+ + +D Sbjct: 1884 KSNDDNQKENALTDAESELKKQKKNLD 1910 >gi|170086237|ref|XP_001874342.1| hypothetical protein LACBIDRAFT_321349 [Laccaria bicolor S238N-H82] gi|164651894|gb|EDR16134.1| hypothetical protein LACBIDRAFT_321349 [Laccaria bicolor S238N-H82] Length = 623 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 33/83 (39%), Gaps = 8/83 (9%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 ++I++L+++ R L+ ++E+ R + NS + V L + +++ + Sbjct: 344 DHIITLEKQCRRLVVQVEETREKLNSVIKEW--------KEDVAELLLKLKKMEQSVTST 395 Query: 88 EKEEHEVCSSLKKLISCIPNVPL 110 + + + + N Sbjct: 396 KDWTMQKVIFTMESLFLFGNGIH 418 >gi|163784051|ref|ZP_02179006.1| purine NTPase [Hydrogenivirga sp. 128-5-R1-1] gi|159880678|gb|EDP74227.1| purine NTPase [Hydrogenivirga sp. 128-5-R1-1] Length = 890 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 11/91 (12%) Query: 10 NPEHLDIALKKRH---LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ------ 60 NP +D +K + + QS+ L + + L K E++ + + S G Sbjct: 406 NPVLVDTMIKDENKLLEDYQSKR-EELLSEYKSLKSKTEELNEQIKNISKLEGNCPTCAR 464 Query: 61 -AIAEGNLSLVDALKNETSTLKEQLPILEKE 90 ++ LK + + L+ QL +E E Sbjct: 465 PLKQHSKEEIIKDLKQKITKLQNQLKDIENE 495 >gi|23274158|gb|AAH32881.1| Stxbp4 protein [Mus musculus] gi|56206630|emb|CAI23909.1| syntaxin binding protein 4 [Mus musculus] Length = 533 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 41/101 (40%), Gaps = 18/101 (17%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA--- 72 AL++R+ E +L ++ + LI+++++++ + + + + +L+ Sbjct: 310 AALEERN--VLKEKLLESEKHRKQLIEELQNVKQEAKAVAEETRALRSRIHLAEAAQRQA 367 Query: 73 -------------LKNETSTLKEQLPILEKEEHEVCSSLKK 100 L+ E S LK QL + E L+K Sbjct: 368 HGMEMDYEEVIRLLEAEVSELKAQLADYSDQNKESVQDLRK 408 >gi|87241127|gb|ABD32985.1| Frigida-like [Medicago truncatula] Length = 665 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 10/101 (9%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN---SAQIGQAIA--E 64 E L L+ + + + L K R L +++D+ +R+N+ +I E Sbjct: 224 EFEGLVKELESKKKDFDI-QVEELKSKERQLEGEVQDLESRKNTLDGRQKEIESKKGEFE 282 Query: 65 GNLSLVDALKN----ETSTLKEQLPILEKEEHEVCSSLKKL 101 G + + K L+ + E++ E + K+ Sbjct: 283 GRVEDFTSEKMDFEIRLKELETKEKHFEEKVKEFELTKKQH 323 >gi|73989862|ref|XP_534204.2| PREDICTED: similar to CG14025-PB, isoform B [Canis familiaris] Length = 1476 Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 32/82 (39%), Gaps = 6/82 (7%) Query: 15 DIALKKRHLEPQSEYILS----LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--S 68 A + + + + + L + R + +++E +++ +I + S Sbjct: 1160 KEAESRENNRIELDRLSEENSWLKNELRKIQQELEAAERTKDAQRKEIEVLRRDKEKTCS 1219 Query: 69 LVDALKNETSTLKEQLPILEKE 90 V+ L ++ K+++ L + Sbjct: 1220 EVEELNKQSQKCKDEVSQLSHK 1241 >gi|312381237|gb|EFR27029.1| hypothetical protein AND_06494 [Anopheles darlingi] Length = 1202 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 16/109 (14%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 ++ IR+ E + A +E+ R+L ++ E R + + + Sbjct: 391 LKAIREEEERMRKA----------------EEEKRLLEEQAEAYRLEQLRLEQERKEQKK 434 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 + D LK E L + + +LK IP E+ Sbjct: 435 QREKERRDRLKAEGRLLTAKQKQDRARAQAMLEALKAQGVEIPEATTEK 483 >gi|296221128|ref|XP_002756614.1| PREDICTED: alpha-internexin [Callithrix jacchus] Length = 499 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + IR N + L R E + L+ +NR L ++ +R R S +G+ Sbjct: 89 KIIRTNEKEQLQGLNDRFAVF-IEKVHQLETQNRALEAELAALRQRHAEPSR-VGELFQR 146 Query: 65 GNLSLVDALKNETST 79 L L+ +S Sbjct: 147 ELRDLRAQLEEASSA 161 >gi|298530895|ref|ZP_07018296.1| putative coiled-coil protein [Desulfonatronospira thiodismutans ASO3-1] gi|298508918|gb|EFI32823.1| putative coiled-coil protein [Desulfonatronospira thiodismutans ASO3-1] Length = 190 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 7/114 (6%) Query: 1 ML-DIQWIRQNPEHLDIAL---KKRHLEPQ---SEYILSLDEKNRILIKKIEDIRARRNS 53 ML ++ IR++ +++ L KR + + +DE L +I++ RA +S Sbjct: 15 MLPELNSIREDYKNIKTTLDLTNKRLDDINAHLVDQGRRIDETRAELSSRIDETRAELSS 74 Query: 54 NSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + ++ LK E E++ K + + + I N Sbjct: 75 RIDETRAELSSRIDETRAELKAEIQKNTERIDETNKRIDDTNKRIDDTNNRIDN 128 >gi|30794488|ref|NP_060046.1| kinesin-like protein KIF27 [Homo sapiens] gi|74750464|sp|Q86VH2|KIF27_HUMAN RecName: Full=Kinesin-like protein KIF27 gi|30025499|gb|AAP04413.1| KIF27A [Homo sapiens] gi|55958538|emb|CAI16013.1| kinesin family member 27 [Homo sapiens] gi|187954611|gb|AAI40789.1| Kinesin family member 27 [Homo sapiens] Length = 1401 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Query: 9 QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 ++ + LK+R +++ LDE+ + L +++E + +R + Sbjct: 898 EDLDAC--NLKRRKGSFGSIDHLQKLDEQKKWLDEEVEKVLNQRQELEELEADLKKREAI 955 Query: 68 -SLVDALKNETSTLKEQ 83 S +AL E S L+ + Sbjct: 956 VSKKEALLQEKSHLENK 972 >gi|6755692|ref|NP_035635.1| syntaxin-binding protein 4 [Mus musculus] gi|81907645|sp|Q9WV89|STXB4_MOUSE RecName: Full=Syntaxin-binding protein 4; AltName: Full=Syntaxin 4-interacting protein; Short=STX4-interacting protein; Short=Synip gi|5453324|gb|AAD43533.1|AF152924_1 syntaxin4-interacting protein synip [Mus musculus] gi|56206629|emb|CAI23908.1| syntaxin binding protein 4 [Mus musculus] Length = 557 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 41/101 (40%), Gaps = 18/101 (17%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA--- 72 AL++R+ E +L ++ + LI+++++++ + + + + +L+ Sbjct: 310 AALEERN--VLKEKLLESEKHRKQLIEELQNVKQEAKAVAEETRALRSRIHLAEAAQRQA 367 Query: 73 -------------LKNETSTLKEQLPILEKEEHEVCSSLKK 100 L+ E S LK QL + E L+K Sbjct: 368 HGMEMDYEEVIRLLEAEVSELKAQLADYSDQNKESVQDLRK 408 >gi|322701334|gb|EFY93084.1| structural maintenance of chromosomes 5 smc5 [Metarhizium acridum CQMa 102] Length = 1119 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 18 LKKRHLEPQSEYIL----SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 +KR LE + + +L E++ L +K++ I ++ S +I S + Sbjct: 683 QEKRELERRLTELQGEKGALKEEHDELQQKLDTIEEQKKEISEKIAAL--RNEKSALQKE 740 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 + +L ++ E+++ +++ + + E Sbjct: 741 FQKWQSLPVKIESEERQKAMHEEAMRDARKNMQEIQYE 778 >gi|304314688|ref|YP_003849835.1| DNA double-strand repair ATPase Rad50 [Methanothermobacter marburgensis str. Marburg] gi|302588147|gb|ADL58522.1| predicted DNA double-strand repair ATPase Rad50 [Methanothermobacter marburgensis str. Marburg] Length = 837 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 43/106 (40%), Gaps = 17/106 (16%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDE------KNRILIKKIEDIRARRNSNSAQIGQAI 62 +N +LK+++ + + EY S+DE + L ++ + + RN + Sbjct: 266 ENLSSFSDSLKRKNRDIEEEYKKSMDELQKCKDLRKKLQEEHDSL---RNDIEKMKDEEK 322 Query: 63 AEGNL--------SLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + + + ++ LKN+ TL + +E+E + + Sbjct: 323 SIRDDYERFRDATTKLEGLKNQFKTLSGVMDNVEREITTIKGEIDD 368 >gi|330845740|ref|XP_003294730.1| hypothetical protein DICPUDRAFT_85181 [Dictyostelium purpureum] gi|325074748|gb|EGC28740.1| hypothetical protein DICPUDRAFT_85181 [Dictyostelium purpureum] Length = 370 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 16/112 (14%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA---QIGQ 60 I +++ E + + +E I L E+N+ L + E + +NS I Q Sbjct: 161 INKLKEELESVK--------DKSTEEINQLKEENKKLKHQFESLNNPLQNNSQYENDIAQ 212 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +++LK + K+ + K + + + E Sbjct: 213 LK-----EELESLKQQQEKEKQDIHQEFKSQINKLNDENNRLKEDLGSLQEN 259 >gi|317499137|ref|ZP_07957414.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893550|gb|EFV15755.1| glycyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 462 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 175 TAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + E + L+ L + RV +L + T D+E + Sbjct: 231 EPDKDLEWFEYWKNYCINWLQTLGIKEDEMRVRDHEKEELSHYSKATSDIEFMFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 289 GELWGIADRTDY 300 >gi|312144492|ref|YP_003995938.1| Sigma 54 interacting domain protein [Halanaerobium sp. 'sapolanicus'] gi|311905143|gb|ADQ15584.1| Sigma 54 interacting domain protein [Halanaerobium sp. 'sapolanicus'] Length = 814 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 52/150 (34%), Gaps = 4/150 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKI-EDIRARRNSNSAQIGQAIAEGNLSLVDALKNET--S 78 E +DE R I++I ++I+ + +I ++I E + AL+ + S Sbjct: 187 GEPLSREDFQEMDEDKREKIREISQEIQNEISQVMREI-RSIKEKAQEELSALEKKIGLS 245 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 ++ + LE++ +E L+ L ++ E+ + + Sbjct: 246 VVQPIICHLEEKYNESEVILEYLQEVQEDIVDHIDRFRNDDEESKKRSFMPIQRDEDGDF 305 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLT 168 ++I + + A + + Sbjct: 306 FNRYKINVFVNNSKTEGAPVIYEKNPTYYN 335 >gi|315052402|ref|XP_003175575.1| dynactin [Arthroderma gypseum CBS 118893] gi|311340890|gb|EFR00093.1| dynactin [Arthroderma gypseum CBS 118893] Length = 1358 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 36/77 (46%), Gaps = 5/77 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED---IRARRNSNSAQIGQAIAE 64 R E + L+++ +PQ + I +L ++ + ++E+ ++A S ++ E Sbjct: 335 RDKFETIIQKLREK-YQPQQQEITTLRKQLKEAEYRVEEVERLQAEHESI-LEMAALDRE 392 Query: 65 GNLSLVDALKNETSTLK 81 + +++K E LK Sbjct: 393 MAEEVAESIKAEYEALK 409 >gi|237831835|ref|XP_002365215.1| HEC/Ndc80p family protein, putative [Toxoplasma gondii ME49] gi|211962879|gb|EEA98074.1| HEC/Ndc80p family protein, putative [Toxoplasma gondii ME49] Length = 663 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 4/109 (3%) Query: 26 QSEYILSLDEKNRIL----IKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 E + ++ R K+I+ ++RRN+ ++I Q AE K E ++ Sbjct: 328 DLEKLKDGIKQQRSASEQQEKEIDAKQSRRNALQSEIRQVAAETQQLDAQLSKAEVEKIR 387 Query: 82 EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130 ++ +L + ++ + V E G V Sbjct: 388 SEIHVLRERVALRSKDVEGQQLQLAGVEDEINRRGEELRVTTRTLGVPW 436 >gi|195035357|ref|XP_001989144.1| GH10207 [Drosophila grimshawi] gi|193905144|gb|EDW04011.1| GH10207 [Drosophila grimshawi] Length = 1348 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 48/116 (41%), Gaps = 10/116 (8%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +I+ ++ N +L +K + + +L+E+ + ++ ++ + + IG A Sbjct: 939 NIERLKNNNANLQENIKT-----AEDKLRALNEERQQCQERKNELEKQASEAEEAIGTAK 993 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 ++ + +K E L +Q + E+ ++L+ + S + V E Sbjct: 994 SQSSD-----VKKEIDALNKQENDRNIKRLELETNLQAVASSVDKVNAEIPYWKEQ 1044 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 7/90 (7%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 IR+ E + +K+R E + ++ D + +E+ +R + AQI + N Sbjct: 367 IRKEIEAYEALIKQR--EAIKKELVGADRSYTEVQSAMENTNKQRKKDKAQIDK-----N 419 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCS 96 +D L + ++++ E + + Sbjct: 420 EKELDELHKLPAKNEKEIEECEHKMERLEQ 449 >gi|167767684|ref|ZP_02439737.1| hypothetical protein CLOSS21_02219 [Clostridium sp. SS2/1] gi|167710701|gb|EDS21280.1| hypothetical protein CLOSS21_02219 [Clostridium sp. SS2/1] gi|291560818|emb|CBL39618.1| glycyl-tRNA synthetase, dimeric type [butyrate-producing bacterium SSC/2] Length = 462 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E R +F + EL Sbjct: 175 TAQGIFVNFKNVQRTSRKKIPFGIGQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDLH---YRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + E + L+ L + RV +L + T D+E + Sbjct: 231 EPDKDLEWFEYWKNYCINWLQTLGIKEDEMRVRDHEKEELSHYSKATSDIEFMFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 289 GELWGIADRTDY 300 >gi|148683940|gb|EDL15887.1| syntaxin binding protein 4 [Mus musculus] Length = 557 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 41/101 (40%), Gaps = 18/101 (17%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA--- 72 AL++R+ E +L ++ + LI+++++++ + + + + +L+ Sbjct: 310 AALEERN--VLKEKLLESEKHRKQLIEELQNVKQEAKAVAEETRALRSRIHLAEAAQRQA 367 Query: 73 -------------LKNETSTLKEQLPILEKEEHEVCSSLKK 100 L+ E S LK QL + E L+K Sbjct: 368 HGMEMDYEEVIRLLEAEVSELKAQLADYSDQNKESVQDLRK 408 >gi|221307553|ref|NP_001138256.1| internexin neuronal intermediate filament protein, alpha [Danio rerio] gi|122890651|emb|CAM12922.1| novel protein similar to X. laevis neurofilament triplet L protein (NF-L) [Danio rerio] Length = 474 Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 40/96 (41%), Gaps = 6/96 (6%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + +R N + L R E + +L++ N++L ++ +R R+N S +AE Sbjct: 88 KIVRTNEKEQLQGLNDRFAMF-IEKVRNLEQHNKVLETELVSLRQRQNEPSR-----LAE 141 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + L+ + L + + E + L+K Sbjct: 142 LYQQEIRDLRAQVDELNNEKSHILIERDSIEEDLQK 177 >gi|325847800|ref|ZP_08170022.1| peptide chain release factor 1 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480818|gb|EGC83871.1| peptide chain release factor 1 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 357 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 4/103 (3%) Query: 1 ML-DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILI---KKIEDIRARRNSNSA 56 ML +++ +R+N + L+ L + ++ + + L +K +IRA + Sbjct: 1 MLENLEHMRENFKELEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEE 60 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + ++D LK E K+ L ++ + Sbjct: 61 NTELLKEAEDKEMIDLLKAEIDENKKNLEKYNEDLKILLIPQD 103 >gi|308161990|gb|EFO64419.1| Nucleotide-binding head-stalk protein, putative [Giardia lamblia P15] Length = 1620 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 4/92 (4%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 L R + + + I L+ + R KK + I + +ALK Sbjct: 1377 KDNLA-RTTKLKDDEIRDLEAQLRDTKKKSQTALNENTQLIDSIQVKMDSVKQESAEALK 1435 Query: 75 NETS---TLKEQLPILEKEEHEVCSSLKKLIS 103 +++ LK +L +E I Sbjct: 1436 KKSAKIEELKAELSHALEEHSTFAMKKDAEIQ 1467 >gi|254567491|ref|XP_002490856.1| hypothetical protein [Pichia pastoris GS115] gi|238030652|emb|CAY68576.1| Hypothetical protein PAS_FragB_0043 [Pichia pastoris GS115] gi|328351239|emb|CCA37639.1| Laminin subunit gamma-1 [Pichia pastoris CBS 7435] Length = 533 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 47/111 (42%), Gaps = 6/111 (5%) Query: 7 IRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 +R+ E + A++ E + + + +E+ + L ++E+++ + + QI +A E Sbjct: 253 LRKETESYEEAIRTMKSEMKLYAKTEVEANEQKQQLEAQLEELQKQI-EQTKQIKEAKKE 311 Query: 65 GNLSLVDALKNETSTL-KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 ++++ + L K+Q+ E KK +P ++ Sbjct: 312 EIAKEKLIIESQKTQLRKQQIKYNRVEHEIHE--YKKFRRIYSLLPDDQSI 360 >gi|194042470|ref|XP_001928966.1| PREDICTED: kinesin-like protein KIF20B-like [Sus scrofa] Length = 1787 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 7/100 (7%) Query: 3 DIQWIRQNPEHLDIALK--KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 D+Q ++ + L KR +E + + + + ++L KI D+ ++N S +I Sbjct: 1243 DLQRKEEDYAEVKEKLADAKRQIEQVQKEVSVMRDDEKLLRVKINDLEKKKNQCSEEI-- 1300 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + + LK + + K + I + E S+K+ Sbjct: 1301 ---DMKQRTIQQLKEQLNNQKVEEAIQQYERVCKDLSVKE 1337 >gi|85858722|ref|YP_460924.1| tol system periplasmic component [Syntrophus aciditrophicus SB] gi|85721813|gb|ABC76756.1| tol system periplasmic component [Syntrophus aciditrophicus SB] Length = 280 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 35/88 (39%), Gaps = 10/88 (11%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA- 61 +I +R++ + L+K ++ + L E+ + + + E +R ++G Sbjct: 49 NIAVLRKDVDAAVEGLRKSQANMGAD-LSELREQVQQVRGQAESLR-------KEVGSLN 100 Query: 62 -IAEGNLSLVDALKNETSTLKEQLPILE 88 A ++ + L +++ LE Sbjct: 101 GKAGKKDDENKEIREKLDQLSQKVNFLE 128 >gi|83644935|ref|YP_433370.1| CheY-like receiver protein [Hahella chejuensis KCTC 2396] gi|83632978|gb|ABC28945.1| FOG: CheY-like receiver [Hahella chejuensis KCTC 2396] Length = 379 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 15/85 (17%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR------------NSNSAQIGQA 61 + +L R E S+ DE+ L + E+++ R N + Sbjct: 196 VKTSLNTRVHELLSDLF---DEQYAHLKRLSEELQNRHDERIETFYSRIENQITTSFAAL 252 Query: 62 IAEGNLSLVDALKNETSTLKEQLPI 86 E + L + E + +KE+L Sbjct: 253 KEEVSAELAREISQELNEIKEELKN 277 >gi|47214617|emb|CAG01458.1| unnamed protein product [Tetraodon nigroviridis] Length = 1158 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 15/93 (16%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIAE-----GNLSLVDAL 73 + ++E+NR L + E+++ R S ++ + G + + Sbjct: 315 KLQEVEERNRTLHQSEEELQELRQKISKGECGNSTLMAELENLRKKVLEMEGKDEEITKM 374 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 +N+ L ++L E E+ + +L + Sbjct: 375 ENQCRELGKKLQDEENHGKELRLEVDQLQKRMA 407 >gi|67465017|ref|XP_648695.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|56464937|gb|EAL43309.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS] Length = 493 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 43/109 (39%), Gaps = 7/109 (6%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNE 76 KKR + + L ++ ++ +++ED+R RN+ QI +E + + + + + Sbjct: 51 KKRF-----DEVAHLKKERTVMKQQLEDLRKERNALRLQIDSLKSENDYIRGMHEESEAK 105 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 + + L+ + E +KL + + ++ + Sbjct: 106 LRDVSTKCKELDSQLSEKSIQCEKLQKQVAVIESDKKVEVAQCEAEVSQ 154 >gi|328861330|gb|EGG10433.1| hypothetical protein MELLADRAFT_47014 [Melampsora larici-populina 98AG31] Length = 826 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 34/82 (41%), Gaps = 8/82 (9%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNS-AQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 + + +L+ + L ++E ++ ++ S +++ + +D LK+E S L E Sbjct: 336 DQLENLERQIITLQIELESLKNDKDEFSLSRVAKIKK-----EIDELKSEASKLTE--KW 388 Query: 87 LEKEEHEVCSSLKKLISCIPNV 108 E++ K+ + Sbjct: 389 NEEKGKLDEVKNMKIRLQSATM 410 >gi|255725234|ref|XP_002547546.1| structural maintenance of chromosome 2 [Candida tropicalis MYA-3404] gi|240135437|gb|EER34991.1| structural maintenance of chromosome 2 [Candida tropicalis MYA-3404] Length = 1171 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 5/96 (5%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + + NP +L + E + I+ L +K + R I + Sbjct: 734 KRLESNP----ASLILKQNESNQQEIIKLTNGIEEHEQKCNEFRQEIARIEKDISE-FNS 788 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 S ++ LK + + LK+Q+ EKE S + Sbjct: 789 DKGSKINDLKKQVAQLKQQVGKKEKELDGQTDSFQA 824 >gi|255070017|ref|XP_002507090.1| DNA topoisomerase I [Micromonas sp. RCC299] gi|226522365|gb|ACO68348.1| DNA topoisomerase I [Micromonas sp. RCC299] Length = 635 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 10/107 (9%), Positives = 32/107 (29%), Gaps = 8/107 (7%) Query: 38 RILIKKIEDIRARRNSNSAQIGQA---IAEGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 + ++E ++ ++ +I + N + + LK S L+ Q+ + ++ + Sbjct: 527 KAHDAQMEKLQDKKKIIEKEIAALRRDKKDTNKAKIRTLKERLSKLELQMKMKDELKSVS 586 Query: 95 CSSLKKLISCIPN-----VPLEEVPIGTSANENILIRSVGKKPSAIH 136 + K + P + + + Sbjct: 587 LGTSKINYMDPRITIAWCKHNDVPPPTVYTKALVEKFNWAMEVEPDF 633 >gi|194038105|ref|XP_001925566.1| PREDICTED: serine/threonine-protein kinase MRCK beta [Sus scrofa] Length = 1665 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 23/157 (14%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED----------IRARRNSN 54 + +R E ++ AL+K ++ + + D+ + L ++ED +R + Sbjct: 549 RQLRDREEEVEAALQK--IDALRQEVRRADKCRKELEAQLEDAVAEASKERKLREHSENF 606 Query: 55 SAQI-----GQAIAEGNLSLVDAL--KNETSTLKEQLP----ILEKEEHEVCSSLKKLIS 103 S QI + +G AL + E S +K +L E+E +S + Sbjct: 607 SKQIESELEALKMKQGGRGPGAALEHQQEISRIKSELEKKVLFYEEELVRREASHVLELK 666 Query: 104 CIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSRE 140 + + + + +L+ + S E Sbjct: 667 TVKKEVHDSEGHQLALQKEVLVLKDKLEKSKRERHSE 703 >gi|114657239|ref|XP_001171886.1| PREDICTED: similar to GRINL1A combined protein Gcom13 precursor isoform 2 [Pan troglodytes] Length = 435 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 221 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 280 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 281 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 339 >gi|157876329|ref|XP_001686523.1| dynein heavy chain [Leishmania major strain Friedlin] gi|68129597|emb|CAJ08142.1| putative dynein heavy chain [Leishmania major strain Friedlin] Length = 4241 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 7/102 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R + + L+K E + + K R + KK+E+++A+ + + L Sbjct: 3047 RDELKEYEANLQK-GQ----EEMTKYEGKLRKVEKKVEELKAKFGE--KTVEAERLKDKL 3099 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 + L L +L ++K+ +P Sbjct: 3100 EQAEQLLENAKELLSKLGDEHTRWTAQMKTIKQDSYFLPKRC 3141 >gi|73962727|ref|XP_861682.1| PREDICTED: similar to bromodomain adjacent to zinc finger domain, 1A isoform a isoform 6 [Canis familiaris] Length = 751 Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 633 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 690 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + V ++ Sbjct: 691 EDEQRNSAADISVGEEEREDF 711 >gi|328790487|ref|XP_623323.3| PREDICTED: myosin heavy chain, non-muscle [Apis mellifera] Length = 1967 Score = 37.0 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R L+ +E + L+ R L +++++ + + + + S + +++ Sbjct: 1489 TRELDEMNEKVEELERIRRGLQSELDELVNNQGTADKNVHELEKAKRALESQLAEQRSQV 1548 Query: 78 STLKEQLPILEKEEHEVCSSLKKLISCIP 106 L+++L E + + +++ L + Sbjct: 1549 EELEDELQFTEDAKLRLEVNMQALRAQFE 1577 >gi|187250824|ref|YP_001875306.1| chromosome segregation ATPase [Elusimicrobium minutum Pei191] gi|186970984|gb|ACC97969.1| Chromosome segregation ATPase [Elusimicrobium minutum Pei191] Length = 1148 Score = 37.0 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 55/164 (33%), Gaps = 16/164 (9%) Query: 8 RQNPEHLDIALKKRHLEPQS-------EYILSLDEKNRILIKKIEDIRARRNSNSAQI-- 58 R N + ++ LKK ++E I+ D+K + I + R + S + Sbjct: 774 RVNADLYEVKLKKNNIEVDLRSTEFEYNNIIEADKKRQDQITAGNE---RIKALSEEKLT 830 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQ---LPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 QA + L+ + + L + L E+ + KK S + + + Sbjct: 831 AQAQLSTQREDLKTLELDQTKLASELQALKKDFDEKSTKLNEYKKRQSDMQLRAHD-LEN 889 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + V + +++ E + +D +R + Sbjct: 890 ALTNYRRQRTTIVNHLMESWNITPEEAAMKFTNKEIDHERVKMM 933 >gi|17550806|ref|NP_509975.1| Temporarily Assigned Gene name family member (tag-241) [Caenorhabditis elegans] Length = 1577 Score = 37.0 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 10/122 (8%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILI----KKIEDIRARRNSNSAQIGQ 60 + +R E L +++ LE + + + K + L + E + RN S Sbjct: 785 KKLRAETELLRKDMQE--LETDKKTVKEFEIKYKKLESIFETEREKMNGERNR-SKNELA 841 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ + + LK + K+ + E+ ++ K + +P E ++A Sbjct: 842 AMKKLKDDAEEHLKKLSDDQKKNDAAWKIEKSKLE---KDIALLKKQLPDEHEMKESTAT 898 Query: 121 EN 122 Sbjct: 899 PQ 900 >gi|170097625|ref|XP_001880032.1| hypothetical protein LACBIDRAFT_326214 [Laccaria bicolor S238N-H82] gi|164645435|gb|EDR09683.1| hypothetical protein LACBIDRAFT_326214 [Laccaria bicolor S238N-H82] Length = 709 Score = 37.0 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 39/73 (53%), Gaps = 6/73 (8%) Query: 39 ILIKKIEDIRARRNS----NSAQIGQAIAE--GNLSLVDALKNETSTLKEQLPILEKEEH 92 L K+++ ++ ++ + +IG+ A+ + + +AL++E+ L++Q+ E +H Sbjct: 209 ELYKELQQLKVQQEKDVIDLNQKIGEMKAQNLKDRAAREALEDESKALRDQIKDWEARQH 268 Query: 93 EVCSSLKKLISCI 105 E+ +++ S Sbjct: 269 ELHLAVRSGRSEW 281 >gi|34596313|gb|AAQ76836.1| GRINL1A combined protein Gcom13 precursor [Homo sapiens] Length = 435 Score = 37.0 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 221 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 280 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 281 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 339 >gi|27527111|emb|CAC87095.1| type II keratin 2 [Lampetra fluviatilis] Length = 438 Score = 37.0 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 I L+ + + ++E ++ +R + I +A G + + K + L+E++ + Sbjct: 279 EITELNRQMQRFRAEMEALKKQRAKLESAIAEAEGRGE-ADIREAKAAIAQLEEEIHKAK 337 Query: 89 KEEHEVCSSLKKLI 102 +E ++L+ Sbjct: 338 QEMARHVREYQELM 351 >gi|118379476|ref|XP_001022904.1| hypothetical protein TTHERM_00579030 [Tetrahymena thermophila] gi|89304671|gb|EAS02659.1| hypothetical protein TTHERM_00579030 [Tetrahymena thermophila SB210] Length = 1000 Score = 37.0 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 48/149 (32%), Gaps = 2/149 (1%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 + + + + + I LD K + ++K+ E + +N I + + + Sbjct: 243 VKQKINDKFENLKKQIISQLDIKQKEMLKQAELLENYQNKIQQNYNNYIQKDKIKELLIK 302 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 + ++++L + + ++ + ++ + I + + S Sbjct: 303 DQNINQVEQKLKSIIDGIYTRQKKFQQEV--QQDMINYQTQISAINYDQVSDISKRILQQ 360 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGA 162 + ++L D++ + Sbjct: 361 ISAIEVFKISDLKSLSQTDYENNMSVYNE 389 >gi|237710115|ref|ZP_04540596.1| DNA mismatch repair protein MutS [Bacteroides sp. 9_1_42FAA] gi|229455577|gb|EEO61298.1| DNA mismatch repair protein MutS [Bacteroides sp. 9_1_42FAA] Length = 836 Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 12/105 (11%) Query: 15 DIALKKRHLEPQS------EYILSLDEKNRILIKK----IEDIRARRNS-NSAQIGQAI- 62 ++KR + + E + L++ + +++K E + N+ I Sbjct: 553 RQNIRKREKQMEETIAKYEEELQELEKSRKEILRKAKEDAEKLLQESNARIENTIRIIKE 612 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 A+ + + + E + K Q+ +EK+ E K Sbjct: 613 AQADKERTQSARQELTDFKNQIEDIEKKNKEDEIIRKMEKLREKQ 657 >gi|256424725|ref|YP_003125378.1| hypothetical protein Cpin_5756 [Chitinophaga pinensis DSM 2588] gi|256039633|gb|ACU63177.1| hypothetical protein Cpin_5756 [Chitinophaga pinensis DSM 2588] Length = 129 Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 35/96 (36%), Gaps = 15/96 (15%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS-------- 55 ++ I+ N E +R+++ YI + + L ++ + + Sbjct: 30 LKQIQNNIEA-----SQRNIDTALNYINASRARLDSLQGDVDKFKYYIKNIQANVSILNT 84 Query: 56 -AQIGQAIAEGN-LSLVDALKNETSTLKEQLPILEK 89 +I +A + VD L + T KE+L + Sbjct: 85 KKEIEEAKSNAKLKETVDELNAKVKTFKEELKATDS 120 >gi|189424194|ref|YP_001951371.1| transcriptional regulator [Geobacter lovleyi SZ] gi|189420453|gb|ACD94851.1| putative transcriptional regulator [Geobacter lovleyi SZ] Length = 252 Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Query: 5 QWIRQNPEH---LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 +I+ NP+ + + +E + L+++++ L +IE ++A R++ I Sbjct: 107 NFIKNNPDAGFAVADVFNTKKMESIV-FALNINQER--LQAEIERLQAERDAL---INSE 160 Query: 62 IAEGNLSLVDALKNETSTLKE 82 +G D S L E Sbjct: 161 KRQGLDDEADVFIEILSCLLE 181 >gi|71018099|ref|XP_759280.1| hypothetical protein UM03133.1 [Ustilago maydis 521] gi|46099130|gb|EAK84363.1| hypothetical protein UM03133.1 [Ustilago maydis 521] Length = 1629 Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 11/95 (11%), Positives = 36/95 (37%), Gaps = 14/95 (14%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI------ 58 + I + + R + ++ + ++++ L +K + + +++ + I Sbjct: 570 KTIVNEFDSIA-----RSTDKVAKELAKYEKEDVQLQEKRKHLESKKKKLAKSIADDRHA 624 Query: 59 ---GQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 +A A + ++ + E L+ L E + Sbjct: 625 ASEAKATASDSAHKIEKEQAEVRKLEASLEREEAQ 659 >gi|320103461|ref|YP_004179052.1| hypothetical protein Isop_1923 [Isosphaera pallida ATCC 43644] gi|319750743|gb|ADV62503.1| hypothetical protein Isop_1923 [Isosphaera pallida ATCC 43644] Length = 543 Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 26/110 (23%) Query: 5 QWIRQNPEHLDIALKKR---HLEPQSEYILSLDEKN-RILIKKIEDIRAR---------- 50 RQN E + +R + E + + L +I+ IR + Sbjct: 58 NRFRQNFEEV-----RRIAGFTDDDLEKLKDARNQRASELTSRIQSIREQVDAVVTKVQE 112 Query: 51 --RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 RN+ + G+ ++ LK + L +++ + + + Sbjct: 113 DARNAQGGEYGRL-----PEEIEDLKRKARELSDKIESEPEIDQGSQMNR 157 >gi|291238785|ref|XP_002739306.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 716 Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 63/206 (30%), Gaps = 8/206 (3%) Query: 38 RILIKKIEDIRARRNSNSAQIGQAI---AEGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 R I+++E +R+ + S Q Q I + LK E L E++ +++E+ + Sbjct: 171 REQIRELEPLRSMLVTVSEQCDQKIMDLRNQEKEEMADLKKENRRLIEKIDTMKEEQMSL 230 Query: 95 CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHL-----SREHFEIGEALG 149 +++L + + + + + + +E E Sbjct: 231 TEQIQQLQDEVATEYHKYRDECDARKLLVADINDLRYQQEDFQKSQMGMQEAAEDESKDD 290 Query: 150 LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 + A KL+ + + AL + + + L++ + + Sbjct: 291 PVLLKIALKLNEMIANYGGCNTKKRLEALEKSYNNFQEEMQTMQDDHKKLMMEHDTLLEV 350 Query: 210 GQIPKFADDMFCTTDGRWLIPTSEVS 235 + D F + + Sbjct: 351 HKQVLAQRDQFYQELEQLKRSATPRP 376 >gi|265750915|ref|ZP_06086978.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_1_33FAA] gi|263237811|gb|EEZ23261.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_1_33FAA] Length = 836 Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 12/105 (11%) Query: 15 DIALKKRHLEPQS------EYILSLDEKNRILIKK----IEDIRARRNS-NSAQIGQAI- 62 ++KR + + E + L++ + +++K E + N+ I Sbjct: 553 RQNIRKREKQMEETIAKYEEELQELEKSRKEILRKAKEDAEKLLQESNARIENTIRIIKE 612 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 A+ + + + E + K Q+ +EK+ E K Sbjct: 613 AQADKERTQSARQELTDFKNQIEDIEKKNKEDEIIRKMEKLREKQ 657 >gi|257460055|ref|ZP_05625159.1| conserved hypothetical protein [Campylobacter gracilis RM3268] gi|257442496|gb|EEV17635.1| conserved hypothetical protein [Campylobacter gracilis RM3268] Length = 447 Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 62/225 (27%), Gaps = 23/225 (10%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ---AIAEGNLSLVDA 72 A K++ E L + K + I+ + R S QI Q + + Sbjct: 134 EAQKRKFSE------LEAENKAKSEIELTNRVNQERERLSKQISQENELKFRQKDEQIQS 187 Query: 73 LKNETSTLKEQLPILEKEEH---EVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 L + + LK + + ++ + + + L P ++EV G + + I Sbjct: 188 LIGQINELKRRSEVGSQQLQGEVQELALQEYLRLNFPLDEIDEVKKGARGADCVQIVHTR 247 Query: 130 KKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV-------LTGHLAHLERALGQFM 182 + + E + G + + H L +A Sbjct: 248 EFVGCGKILYESKRTKSFEPKWIDKLKDDMIGEGAQIGVIVTEQMPPHSPRLHQAP---- 303 Query: 183 IDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRW 227 D + E V E + + + T + Sbjct: 304 SDASIWICSFEEFKGLCAVLREHVVALAFAKRSGQNQDSKTAMLY 348 >gi|212694400|ref|ZP_03302528.1| hypothetical protein BACDOR_03927 [Bacteroides dorei DSM 17855] gi|237727622|ref|ZP_04558103.1| DNA mismatch repair protein MutS [Bacteroides sp. D4] gi|212662901|gb|EEB23475.1| hypothetical protein BACDOR_03927 [Bacteroides dorei DSM 17855] gi|229434478|gb|EEO44555.1| DNA mismatch repair protein MutS [Bacteroides dorei 5_1_36/D4] Length = 836 Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 12/105 (11%) Query: 15 DIALKKRHLEPQS------EYILSLDEKNRILIKK----IEDIRARRNS-NSAQIGQAI- 62 ++KR + + E + L++ + +++K E + N+ I Sbjct: 553 RQNIRKREKQMEETIAKYEEELQELEKSRKEILRKAKEDAEKLLQESNARIENTIRIIKE 612 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 A+ + + + E + K Q+ +EK+ E K Sbjct: 613 AQADKERTQSARQELTDFKNQIEDIEKKNKEDEIIRKMEKLREKQ 657 >gi|188996887|ref|YP_001931138.1| SMC domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931954|gb|ACD66584.1| SMC domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 891 Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 36/111 (32%), Gaps = 18/111 (16%) Query: 4 IQWIRQNPEHLDIALKK----RHLEPQSEYILSLDEK---------NRILIKKIEDIRAR 50 ++ R+ LK R + + + + +K ++ + K E++ Sbjct: 525 LKQAREKFNIFTHKLKNEENLRKQKEEIDQFIKEHQKDYGFFKNLQSKNIQKSYENLNKE 584 Query: 51 RNSNSAQIGQAIAEGN-----LSLVDALKNETSTLKEQLPILEKEEHEVCS 96 S +I + + + ++ ET E+L +E + Sbjct: 585 IKELSEKINNLLKQIDFSASSKEEIEIKLRETKEKIEELKPYREEYLKAKQ 635 >gi|149195329|ref|ZP_01872416.1| hypothetical protein CMTB2_08530 [Caminibacter mediatlanticus TB-2] gi|149134521|gb|EDM23010.1| hypothetical protein CMTB2_08530 [Caminibacter mediatlanticus TB-2] Length = 240 Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 20/203 (9%), Positives = 61/203 (30%), Gaps = 17/203 (8%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + E ++ +K ++ L+ K R L ++E + + + N Sbjct: 19 KELEPVEANIK--------APLIKLENKKRNLEDRLEKLEEEIKAI-----KVKKNKNEL 65 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSV 128 L+ LK++ ++E+ ++ E+ +++ ++ E Sbjct: 66 LIAELKDKLKDIEEKQAKVKSEKEFKALQIEEELAKEQIESANEEIARFEKIIEQKEEEK 125 Query: 129 GKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTS 188 + + + + + F + + + +F Sbjct: 126 EEIKKELEKIEADITLTQVEVEKKLEVVENQKRELFKNKEELIQKMNPQIYRFYE----K 181 Query: 189 EHGYTEVSAPLLVRDEAMYGTGQ 211 + ++A + V+ +A G Sbjct: 182 IKRWAGITAVVPVKKQACSGCNM 204 >gi|325686318|gb|EGD28348.1| secreted protein [Streptococcus sanguinis SK72] gi|325689103|gb|EGD31110.1| secreted protein [Streptococcus sanguinis SK115] gi|325695239|gb|EGD37139.1| secreted protein [Streptococcus sanguinis SK150] gi|327463371|gb|EGF09690.1| secreted protein [Streptococcus sanguinis SK1057] Length = 414 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 2/91 (2%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQLP 85 E I + D K L ++ + +A+ N Q+ + + + L E++ L ++ Sbjct: 42 EKIAAQDSKINSLTEQQQSAQAQVNEIQGQVSAIQKQQEELKAENEKLSAESAKLSAEID 101 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 L K SL I Sbjct: 102 ELSKNIVARNESLANQARSTQTNGTATSYIN 132 >gi|308159143|gb|EFO61690.1| Hypothetical protein GLP15_4345 [Giardia lamblia P15] Length = 1334 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 10/127 (7%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 N + I L K Q E +LD+K ++ ++ RN S + + + Sbjct: 659 NASVVQIKLNK----VQLELQEALDDK----QVILDQLKEERNEKSQLVSELTVCRD--T 708 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 +D + +E LK++L +E + + + +L + + P + + Sbjct: 709 IDHMTSEIEELKDRLDESLAKESILSNDILELRGRMASSPRPGECGSPVSVLGFNDNNRQ 768 Query: 130 KKPSAIH 136 P Sbjct: 769 PSPKMDD 775 >gi|300869941|ref|YP_003784812.1| molybdate metabolism regulator [Brachyspira pilosicoli 95/1000] gi|300687640|gb|ADK30311.1| Molybdate metabolism regulator [Brachyspira pilosicoli 95/1000] Length = 1130 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 2/138 (1%) Query: 50 RRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 +N + ++ + + D++K E +TLK+++ L + + + Sbjct: 856 EKNKIIKSLPATNSKDDKEIADSVKKEFTTLKKEIKTLIQSQKIRLQRVLMNGRKWSYES 915 Query: 110 LEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEA--LGLMDFDRATKLSGARFSVL 167 + V + S ++ + + E F E D + + ++ Sbjct: 916 FKNVFVNNSIMNIFALKLIWGVYDDDNKLIESFRYMEDGTFNTADEEEYKLEDTNKKNIS 975 Query: 168 TGHLAHLERALGQFMIDL 185 H L+ Sbjct: 976 LVHPMELDENTLNKWQQQ 993 >gi|281206350|gb|EFA80538.1| hypothetical protein PPL_06576 [Polysphondylium pallidum PN500] Length = 938 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 30/76 (39%), Gaps = 5/76 (6%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 + K R I D++++ L ++E + R N + A+I + + + Sbjct: 589 EENTKLRRENQNLSKI---DKRHKELSNELEKSKERDNKSKAEIDKLKKRNQRNDDE--L 643 Query: 75 NETSTLKEQLPILEKE 90 + K+ + E++ Sbjct: 644 KKIKNEKDVIQQREED 659 >gi|301103444|ref|XP_002900808.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262101563|gb|EEY59615.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 537 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 74/211 (35%), Gaps = 12/211 (5%) Query: 38 RILIKKIEDIRARRNSNSAQIGQAIAE---GNLSLVDALKNETSTLKEQLPILEKEEHEV 94 R ++ ED +A+R + QI +A + + AL+ + LKEQ+ +L+ E Sbjct: 156 RKQPEEYEDPKAKRRA---QIAKAARKHRQRQKDELIALRAKVKDLKEQIEVLQSSEPSE 212 Query: 95 CSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFD 154 +L E+ L +++ ++ I +++F L + D Sbjct: 213 --HNTELGWKQEAEQHAEIRARVDQENEFLRKTLMEQMKFIQRLQDYFTKQPLLNMPSLD 270 Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDE----AMYGTG 210 S + + + A + + E++ +V + A Sbjct: 271 MILNSSSSASTTPAALSNTISAAPSVLQLQSGSFRDRLIEMANESMVNSDKQLTACETAF 330 Query: 211 QIPKFADDMFCTTDGRWLIPTSEVSLTNLYS 241 + PK + + ++ + +E+ + + Sbjct: 331 RNPKTSTMTYFGLQVQYEMGKNEMGIFFRHH 361 >gi|253745126|gb|EET01230.1| Spindle pole protein, putative [Giardia intestinalis ATCC 50581] Length = 946 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 14/77 (18%) Query: 3 DIQWIRQNPEHLDIALKKRHLEP------QSEYILSLDEKNRILIKKIEDIRAR------ 50 DI+ +R++ E A R E S+ L L++K +I+ ++ RA Sbjct: 820 DIKRLREDYEQAR-AQASRAEEVTGEVASMSQRYLELEKKYEDVIRDGQNARAEAASKDA 878 Query: 51 -RNSNSAQIGQAIAEGN 66 S S QIG Sbjct: 879 TIESLSRQIGYLKGIEK 895 >gi|227522520|ref|ZP_03952569.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus hilgardii ATCC 8290] gi|227090342|gb|EEI25654.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus hilgardii ATCC 8290] Length = 648 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 36/84 (42%), Gaps = 3/84 (3%) Query: 20 KRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 K++ E + + L+ + L +++++ +N+ +Q+ Q +L L+ + Sbjct: 563 KKNYEVNKQNQKEVRKLNREVIDLESQLDELSKSKNNIESQMAQPEVFNDLDKASDLQKK 622 Query: 77 TSTLKEQLPILEKEEHEVCSSLKK 100 + +++ E + + L+ Sbjct: 623 LEMIDQKIKETESKWEQKSLQLED 646 >gi|212545659|ref|XP_002152983.1| nuclear condensin complex subunit Smc4, putative [Penicillium marneffei ATCC 18224] gi|210064503|gb|EEA18598.1| nuclear condensin complex subunit Smc4, putative [Penicillium marneffei ATCC 18224] Length = 1464 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 10/86 (11%) Query: 26 QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE----------GNLSLVDALKN 75 +L+++ + L +++E++R +I A+ + VD+LK Sbjct: 1016 DENRAKALNQQIKALQREVENLRQDMAGIEEEIQSLQAKIMEVGGVRLRSQKAKVDSLKA 1075 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKL 101 + + L E++ E + + +KK Sbjct: 1076 QINLLSEEISNAEVAKSKNEKLIKKH 1101 >gi|123454386|ref|XP_001314948.1| hypothetical protein [Trichomonas vaginalis G3] gi|121897610|gb|EAY02725.1| hypothetical protein TVAG_465850 [Trichomonas vaginalis G3] Length = 874 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 38/109 (34%), Gaps = 3/109 (2%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + + L+ + + I +L+ +N L +I + + + + I A+ + Sbjct: 162 EETKTAKKKLRTKFATLG-DKIQALETENAQLQVQITNAQNDKKALEQTIQALKAQIQAA 220 Query: 69 LV--DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 + + + LK++L + + L + + E I Sbjct: 221 QAGKEESEASINLLKKELEAKQHIINGFEEDLDSQREELIQMNSERDNI 269 >gi|114595567|ref|XP_517383.2| PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform 2 [Pan troglodytes] gi|332819929|ref|XP_003310452.1| PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Pan troglodytes] Length = 312 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 11/114 (9%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 N + + L+++ E + I+ ++ L+K+ ++A Sbjct: 3 NNDAVLKRLEQKGAEA--DQIIEYLKQQVSLLKEKAILQATLKEEKKL---------RVE 51 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 LK E LK++L E + N + E I ++ + Sbjct: 52 NAKLKKEIEELKQELIQAEIQNGVKQIPFPSGTPLQANSMVSENVIQSTPVTTV 105 >gi|50288719|ref|XP_446789.1| hypothetical protein [Candida glabrata CBS 138] gi|49526097|emb|CAG59716.1| unnamed protein product [Candida glabrata] Length = 644 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 49/153 (32%), Gaps = 7/153 (4%) Query: 4 IQWIRQNPEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 I++ + + K ++ + D + L +K+E + A +S S +I Sbjct: 446 IKFFDEELIKVKDMYDTSKSKIQMNLSQVNDQDHIQKELYEKLEKLNAEIDSISKKINSE 505 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP---NVPLEEVPIGTS 118 G + + L N L E + EK + + + + N E Sbjct: 506 --GGKKAEILVLLNTHKELMENVRYEEKNIESYNTERQYMEQELERANNAYDENEKETIK 563 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 + + + + + E +I + + Sbjct: 564 ITDELKNKKHQFRTDYSNTEPEEQKINIRINDI 596 >gi|257470316|ref|ZP_05634407.1| putative tail protein [Fusobacterium ulcerans ATCC 49185] Length = 700 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 21/110 (19%) Query: 2 LDIQWIRQ---NPEHLDIALKK--RHLEPQSEYILSLD-------EKNRILIKKIEDIRA 49 LD++ ++ N E L L+ + +E S+ I+ L+ +KN+ L K ++ Sbjct: 39 LDLKKTQESLKNFESLKTGLQNIAKEMEITSKSIVDLNGELKVNSDKNKELQKTYNNLGN 98 Query: 50 RRNSNSAQIGQAIAE---------GNLSLVDALKNETSTLKEQLPILEKE 90 I + N D LK E LKE++ E Sbjct: 99 EMKKTENNISSIKLKMSELDGNLKKNKENTDKLKLEERRLKEEMKNTSTE 148 >gi|194746980|ref|XP_001955932.1| GF24848 [Drosophila ananassae] gi|190623214|gb|EDV38738.1| GF24848 [Drosophila ananassae] Length = 707 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 40/89 (44%), Gaps = 2/89 (2%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNS--AQIGQAIAEGNLSLVDALKNETSTLKEQLP 85 + +D + L +IE++ RN+ S ++ Q + S D+L+++ +L+E L Sbjct: 393 DRFAKVDYQQDKLKARIEELEKERNTLSNQKEMLQEYHQKQKSRADSLESQRKSLQETLA 452 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 L + E + L+ + +++ Sbjct: 453 SLTETETNLKKKLEVQQKSLKQYYQQQME 481 >gi|170587384|ref|XP_001898456.1| hypothetical protein Bm1_35035 [Brugia malayi] gi|158594080|gb|EDP32670.1| hypothetical protein Bm1_35035 [Brugia malayi] Length = 1098 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 9/87 (10%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRA------RRNSNSAQIGQAIAEGNLSLVDAL 73 KR++E + IL + E+NR L+ K++ ++ N +S + + D + Sbjct: 512 KRNVE---QEILDVKEENRALLTKVDTLKYKLDLLLESNDDSDSGTIRKIKQLIDESDQM 568 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKK 100 K+E KE L E E ++ ++ Sbjct: 569 KDEVEKYKELLNKKELEIKKLEQFERQ 595 >gi|154687602|ref|YP_001422763.1| CwlO [Bacillus amyloliquefaciens FZB42] gi|154353453|gb|ABS75532.1| CwlO [Bacillus amyloliquefaciens FZB42] Length = 470 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 11/104 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA------I 62 + + ++ + E S SL+ K R L K++D +A+ I Sbjct: 30 ETLDSKKAKIESKQSEVAS----SLEAKEREL-SKLQDKQAKIEKELKDINAKALDTSNK 84 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 E + + K + + LK+++ E + LKK + + Sbjct: 85 IEDKKAENEKTKKQIADLKKEIKETEARIEKRNEILKKRVRSLQ 128 >gi|114657233|ref|XP_001171951.1| PREDICTED: GRINL1A complex locus protein 1 isoform 6 [Pan troglodytes] Length = 466 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|1778115|gb|AAB40642.1| M protein [Streptococcus pyogenes] Length = 208 Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 28/113 (24%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILS---------------LDEKNRILIKKIEDI 47 D+ R+ + ++ L +L + + + LD R K++E Sbjct: 14 DLDASREAKKQVEKDLA--NLTAELDKVKEEKQISDASRKGLRRDLDAS-REAKKQVEKA 70 Query: 48 RARRN-------SNSAQIGQAIA---EGNLSLVDALKNETSTLKEQLPILEKE 90 N + ++ ++ +G L L+ E LKE+L +E Sbjct: 71 LEEANSKLAALEKLNKELEESKKLTEKGKAELQAKLEAEAKALKEKLAKQAEE 123 >gi|313229722|emb|CBY18537.1| unnamed protein product [Oikopleura dioica] Length = 2148 Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Query: 7 IRQNPEHLDIALKKRH------LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +R++ E+ + K+++ L +++ + + +E+ + L E+ + +N Q+ + Sbjct: 688 LRKDLENGEKEEKRKNAFLLKELSDKNDEVNNFNEELKGLQDNFENEKTEKNEMIKQLEK 747 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPI 86 I + + L++E + E L Sbjct: 748 DI-QKKDDEIKELQDEVAGFNEDLEQ 772 >gi|224113909|ref|XP_002332472.1| predicted protein [Populus trichocarpa] gi|222832555|gb|EEE71032.1| predicted protein [Populus trichocarpa] Length = 1229 Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 11/80 (13%) Query: 15 DIALKKRHLEPQS--------EYILSLDEKNRILIKKIEDIR---ARRNSNSAQIGQAIA 63 A KR + + + L+++ R+L K+IE++R A +S S + + Sbjct: 574 KEAEMKRFTSVDTSVLKQHYDKKVQDLEQEKRLLQKEIEELRYNLANISSTSDDGAKKLK 633 Query: 64 EGNLSLVDALKNETSTLKEQ 83 E L + L+ + + LK++ Sbjct: 634 EDYLQKLTVLEAQVAELKKK 653 >gi|254304118|ref|ZP_04971476.1| possible ATP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324310|gb|EDK89560.1| possible ATP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 921 Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 18/112 (16%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRAR-----RNSN 54 DIQ + +N E + R + + E L+LDEK L +E++ +N N Sbjct: 561 DIQKLIENQE-FQNSQMLREKKKELEVELRNLNLDEKRENLKNLLENLEREKEKILKNQN 619 Query: 55 S-----AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 S +I + + + +K ++ E + ++ + + Sbjct: 620 SIESNLKEIDEYSKKIK----EDTNKNIENIKSEIKTFENKLDDLKNPYNEY 667 >gi|146417278|ref|XP_001484608.1| hypothetical protein PGUG_02337 [Meyerozyma guilliermondii ATCC 6260] Length = 1170 Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 15/98 (15%) Query: 7 IRQN---PEHLDIALKKRHLEPQSEYI-LSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 IR+N +D + L + E I + LDE+ L+ ++ N+ + I Sbjct: 849 IRENENELALIDNKISD--LSTELESIRVQLDEERANLLG----LKEELNAVTKAI---- 898 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ L+ L +L + + S + K Sbjct: 899 -QEKKDEINELQLNIQKLDNELEKSTSISNNLQSHIDK 935 >gi|119503904|ref|ZP_01625986.1| putative helicase [marine gamma proteobacterium HTCC2080] gi|119460412|gb|EAW41505.1| putative helicase [marine gamma proteobacterium HTCC2080] Length = 2067 Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 10/118 (8%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 L KR L K + IK+ ED+ + S I A+A+ + V L Sbjct: 243 KSNLSKRG---------ELRTKLKSAIKQSEDLDKKITSLQKLISHALAQNDGVEVKRLD 293 Query: 75 NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 E L +Q + + + + + P + + + ++ + P Sbjct: 294 VELDRLIDQRSFIPRVNVDSAEMFHRWEM-QRSPPDILITNTSMLSIMLMRQKHPDYP 350 >gi|90083479|dbj|BAE90822.1| unnamed protein product [Macaca fascicularis] Length = 670 Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 8/189 (4%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + + L R L K +++ +N+ + + + + + + K + + Sbjct: 144 RKIKETVDQVEEL---RRDLRIKSQELE-VKNAAANDKLKKMVK-DQQEAEKKKVMSQEI 198 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRSVGKKPSAIHLS 138 +EQL ++ + S+K+ + + +E + +RS+ P+A+ L+ Sbjct: 199 QEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLA 258 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + D+ + + R + + + + + + + Sbjct: 259 LESICLLLGESTTDWKQIRSII-MRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNY 317 Query: 199 LLVRDEAMY 207 +V ++ Sbjct: 318 EIVNRASLA 326 >gi|114657241|ref|XP_510438.2| PREDICTED: similar to GRINL1A combined protein Gcom11 precursor isoform 8 [Pan troglodytes] Length = 397 Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 183 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 242 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 243 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 301 >gi|332235768|ref|XP_003267075.1| PREDICTED: GRINL1A complex locus protein 1 isoform 3 [Nomascus leucogenys] Length = 466 Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIKHLDDMVHCQQKKVKQM 370 >gi|237739328|ref|ZP_04569809.1| hydrolase [Fusobacterium sp. 2_1_31] gi|229422936|gb|EEO37983.1| hydrolase [Fusobacterium sp. 2_1_31] Length = 518 Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 37/105 (35%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 ++ R +E ++ +++ + +E+ +S + +I E + + + Sbjct: 19 FKKSVIDRQIEKLNDLEDEVEKAKLKAKEIVEEAEKDASSKAKEIELKAKEKAYQIKEEV 78 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + E LK ++ E + L I N LE I Sbjct: 79 EKEARNLKNEIAQKEARIVKKEEILDGKIEKAENKSLELEKINNE 123 >gi|167384277|ref|XP_001736883.1| caldesmon [Entamoeba dispar SAW760] gi|165900591|gb|EDR26887.1| caldesmon, putative [Entamoeba dispar SAW760] Length = 493 Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 7/84 (8%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNE 76 KKR + + L ++ ++ +++ED+R RN+ QI +E + + + + Sbjct: 51 KKRF-----DEVAHLKKERTVMKQQLEDLRKERNALRLQIDSLKSENEYIRGMHEESEAK 105 Query: 77 TSTLKEQLPILEKEEHEVCSSLKK 100 + + L+ + E +K Sbjct: 106 LRDISTKCKELDSQLSEKSIQCEK 129 >gi|322367864|ref|ZP_08042434.1| Patched family protein [Haladaptatus paucihalophilus DX253] gi|320552571|gb|EFW94215.1| Patched family protein [Haladaptatus paucihalophilus DX253] Length = 1255 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 37/108 (34%), Gaps = 15/108 (13%) Query: 8 RQNPEHLDIALKKRHLEPQSEYIL-------------SLDEKNRILIKKIEDIRARRNSN 54 RQ E L++R E +S+ L + L ++ +++ Sbjct: 364 RQELEVDAQQLEQRAAELESDKAELEQQSEQLQESAGQLQAERAELEQRSAELQQEGKEL 423 Query: 55 SAQIGQAI--AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + + AL+ ++ LKE+ L+++ + ++ Sbjct: 424 QQAFSELQQDKKELQEKQAALEADSQQLKERGAQLKEDSQRLQEDSQE 471 >gi|70166580|ref|NP_001018110.1| GRINL1A upstream protein isoform 7 [Homo sapiens] gi|238064959|sp|P0CAP1|GCOM1_HUMAN RecName: Full=GRINL1A complex locus protein 1; AltName: Full=GRINL1A combined protein; Short=Gcom; AltName: Full=GRINL1A upstream protein; Short=Gup; Flags: Precursor gi|32265050|gb|AAP41548.1| GRINL1A upstream protein 1 precursor [Homo sapiens] gi|34596307|gb|AAQ76833.1| GRINL1A combined protein Gcom8 precursor [Homo sapiens] gi|75517786|gb|AAI01646.1| GRINL1A complex locus [Homo sapiens] gi|85567374|gb|AAI12149.1| GRINL1A complex locus [Homo sapiens] gi|119597928|gb|EAW77522.1| hCG40688, isoform CRA_a [Homo sapiens] gi|119597929|gb|EAW77523.1| hCG40688, isoform CRA_a [Homo sapiens] Length = 466 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|332842506|ref|XP_003314441.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 1A isoform 2 [Pan troglodytes] Length = 1524 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 601 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 658 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + + ++ Sbjct: 659 EDEQRNSTADISIGEEEREDF 679 >gi|326389845|ref|ZP_08211409.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325994113|gb|EGD52541.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 462 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 9/135 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + + L L + R +L + T D+E + Sbjct: 231 KPGEDMEWFSYWRKYCMDWLLEFGLKEENLRFRDHKKEELSHYSTATTDIEYNFPF--GW 288 Query: 348 REISSCSTCGNFQSR 362 E+ + +F R Sbjct: 289 GELWGIANRTDFDLR 303 >gi|309774864|ref|ZP_07669885.1| putative peptidase, M23/M37 family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308917422|gb|EFP63141.1| putative peptidase, M23/M37 family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 489 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 34/95 (35%), Gaps = 9/95 (9%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN---------LSLVDALKNETSTLKE 82 +LD++ R + +I ++ S I + + + +D ++ S LK+ Sbjct: 30 NLDKEIRDIKSQIASVKGDAEQVSKLIAENNKKIESYEKEISSIQASIDQTQSSISDLKK 89 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 Q+ E+ E ++ + + I Sbjct: 90 QIKDKEESIKERDKQMRARLLEMQAYTGSNYYIDF 124 >gi|307266972|ref|ZP_07548489.1| glycyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918021|gb|EFN48278.1| glycyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 462 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 9/135 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + + L L + R +L + T D+E + Sbjct: 231 KPGEDMEWFSYWRKYCMDWLLEFGLKEENLRFRDHKKEELSHYSTATTDIEYNFPF--GW 288 Query: 348 REISSCSTCGNFQSR 362 E+ + +F R Sbjct: 289 GELWGIANRTDFDLR 303 >gi|301754027|ref|XP_002912875.1| PREDICTED: LOW QUALITY PROTEIN: FYVE and coiled-coil domain-containing protein 1-like [Ailuropoda melanoleuca] Length = 1469 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 46/92 (50%), Gaps = 5/92 (5%) Query: 29 YILSLDEKNRILI---KKIEDIRARRNSNSAQIGQA--IAEGNLSLVDALKNETSTLKEQ 83 + L EK R L K +++ ++N+ Q+ + + E + ++ L+ ET+ L+E+ Sbjct: 399 EVQELQEKLRALERESTKTQELNRQQNAQLEQLAKELQLKEEAQADLERLRKETAPLREE 458 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 L +E ++ L++ ++ + +V E + Sbjct: 459 LAAKGQEATQLRRQLREALAHLSSVEQELAEV 490 >gi|297847888|ref|XP_002891825.1| hypothetical protein ARALYDRAFT_314752 [Arabidopsis lyrata subsp. lyrata] gi|297337667|gb|EFH68084.1| hypothetical protein ARALYDRAFT_314752 [Arabidopsis lyrata subsp. lyrata] Length = 879 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 33/109 (30%), Gaps = 9/109 (8%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 + +R + + L LD++ R K + + ++G+ +E + + L+ Sbjct: 765 EQISRRTNDIK----LELDDERREKKK----LEEELMELNKELGELGSESVEAAIVRLQE 816 Query: 76 ETSTLKEQLPILE-KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 E K L + + +K + I Sbjct: 817 EVKNCKNILKCGVCFDRPKEVVIVKCYHLFCQQCIQRSLEIRHRKCPGC 865 >gi|262066424|ref|ZP_06026036.1| HDIG/KH domain protein [Fusobacterium periodonticum ATCC 33693] gi|291379851|gb|EFE87369.1| HDIG/KH domain protein [Fusobacterium periodonticum ATCC 33693] Length = 521 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 37/105 (35%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL 73 ++ R +E ++ +++ + +E+ +S + +I E + + + Sbjct: 22 FKKSVIDRQIEKLNDLEDEVEKAKLKAKEIVEEAEKDASSKAKEIELKAKEKAYQIKEEV 81 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + E LK ++ E + L I N LE I Sbjct: 82 EKEARNLKNEIAQKEARIVKKEEILDGKIEKAENKSLELEKINNE 126 >gi|167037771|ref|YP_001665349.1| glycyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039989|ref|YP_001662974.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|256751965|ref|ZP_05492835.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|300914079|ref|ZP_07131395.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307724688|ref|YP_003904439.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|320116186|ref|YP_004186345.1| glycyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166854229|gb|ABY92638.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|166856605|gb|ABY95013.1| glycyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749170|gb|EEU62204.1| glycyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|300889014|gb|EFK84160.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307581749|gb|ADN55148.1| glycyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|319929277|gb|ADV79962.1| glycyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 462 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 9/135 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K +P + SFR+E + R +F + EL Sbjct: 175 TAQGIFVNFKNVQRTTRKKIPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + + L L + R +L + T D+E + Sbjct: 231 KPGEDMEWFSYWRKYCMDWLLEFGLKEENLRFRDHKKEELSHYSTATTDIEYNFPF--GW 288 Query: 348 REISSCSTCGNFQSR 362 E+ + +F R Sbjct: 289 GELWGIANRTDFDLR 303 >gi|153812461|ref|ZP_01965129.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174] gi|149831386|gb|EDM86474.1| hypothetical protein RUMOBE_02860 [Ruminococcus obeum ATCC 29174] Length = 657 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 98/328 (29%), Gaps = 45/328 (13%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 R++ + ++ + + + R + S + A + Sbjct: 112 REDLDEIEKE---------------------MKKIIKKGAKIERFTKSREDAIAFFKEKN 150 Query: 68 SLVD-ALKNETSTLKEQLPILEKEEHEV-----CSSLKKLISCIPNVPLEEVPIGTSANE 121 L + E++ + + K + + S Sbjct: 151 EPYKVELIEDLPE-GEEISFYSQGDWTDLCAGPHLMSVKGVKAFKLLSSSSAYWRGSEKN 209 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMD---FDRATKLSGARFSVLTGHLAHLERAL 178 +L R G + +EH E E D R K+ + G + + Sbjct: 210 AMLTRIYGTAYATKDELKEHLEQMEEAKKRDHNKLGREMKIFTTVDVIGQGLPLIMPNGV 269 Query: 179 G-----QFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-----CTTDGRWL 228 Q I+ ++ GY PL+ + + +G + D MF T + Sbjct: 270 IMMQELQRWIEDEETKRGYVRTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEETDKEVFA 329 Query: 229 IPTSEVSLTNL-YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV 287 + Y E + LPLR+ + FR+E + G+ R QF E Sbjct: 330 LRPMTCPFQYYVYKAEQHSYRDLPLRYGETSTLFRNEDSG---EMHGLTRVRQFTISEGH 386 Query: 288 SITREEDSFTEHERMLSCAEEILKRLDL 315 I R + E + ++ A+ L+ L + Sbjct: 387 LIVRPDQMVKEFKDCIALAQYCLQVLGV 414 >gi|119586306|gb|EAW65902.1| bromodomain adjacent to zinc finger domain, 1A, isoform CRA_c [Homo sapiens] gi|119586309|gb|EAW65905.1| bromodomain adjacent to zinc finger domain, 1A, isoform CRA_c [Homo sapiens] Length = 1555 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 632 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 689 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + + ++ Sbjct: 690 EDEQRNSTADISIGEEEREDF 710 >gi|119586305|gb|EAW65901.1| bromodomain adjacent to zinc finger domain, 1A, isoform CRA_b [Homo sapiens] Length = 1523 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 600 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 657 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + + ++ Sbjct: 658 EDEQRNSTADISIGEEEREDF 678 >gi|32967605|ref|NP_872589.1| bromodomain adjacent to zinc finger domain protein 1A isoform b [Homo sapiens] gi|119586307|gb|EAW65903.1| bromodomain adjacent to zinc finger domain, 1A, isoform CRA_d [Homo sapiens] Length = 1524 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 601 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 658 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + + ++ Sbjct: 659 EDEQRNSTADISIGEEEREDF 679 >gi|57527987|ref|NP_001009578.1| moesin [Sus scrofa] gi|127236|sp|P26042|MOES_PIG RecName: Full=Moesin; AltName: Full=Membrane-organizing extension spike protein gi|164582|gb|AAB02864.1| moesin [Sus scrofa] Length = 577 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 11/113 (9%), Positives = 30/113 (26%), Gaps = 2/113 (1%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILE 88 L+L+++ + + E + R + + L E + L ++ LE Sbjct: 373 LALEQERKRAQSEAEKLAKERQEAEEAKEALLKASRDQKKTQEQLALEMAELTARISQLE 432 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + S + V + + + ++ Sbjct: 433 MARQKKESEAAEWQQKAQMVQEDLEKTRAELKTAMSTPHGAEPAENDQDEQDE 485 >gi|27376498|ref|NP_768027.1| hypothetical protein blr1387 [Bradyrhizobium japonicum USDA 110] gi|27349639|dbj|BAC46652.1| blr1387 [Bradyrhizobium japonicum USDA 110] Length = 379 Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 25/105 (23%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS---------------- 55 ++L R L QS+ I L+E R RN +S Sbjct: 52 DNLRQKESGRSLNNQSDAIQKLEEYKRAT---------ERNQSSNRDRSVITQRDLEDLL 102 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 QI +A EGN + + + + E L + + + + Sbjct: 103 KQIEKAAREGNREAAQRMLEQLAQIMENLQMAQPGQSGDSDMEQA 147 >gi|332842504|ref|XP_003314440.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 1A isoform 1 [Pan troglodytes] Length = 1556 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 633 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 690 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + + ++ Sbjct: 691 EDEQRNSTADISIGEEEREDF 711 >gi|307264841|ref|ZP_07546403.1| SMC domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306920099|gb|EFN50311.1| SMC domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 376 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 35/112 (31%), Gaps = 15/112 (13%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEP-QSEYI---LSLDEKNRILIKKIEDIRARRNSNSAQ 57 +++ RQ + + ++ + E + LSLD + L +I ++ Sbjct: 17 HNLKDKRQEFDREKNNIVEKEKNIKEIESLKVNLSLDME--KLQGEIYKLQQEVKKIQKD 74 Query: 58 IGQAIA---------EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 I + L+ E + + E+ +E E + Sbjct: 75 ISSLEDNIFQEEEDLQKRKEKFSILQQEFTNINEEFHKVEMEMQRFQIEIDN 126 >gi|294617260|ref|ZP_06696904.1| minor capsid protein [Enterococcus faecium E1679] gi|291596484|gb|EFF27733.1| minor capsid protein [Enterococcus faecium E1679] Length = 1544 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQ-----IGQAIAEGNLSLVDALKNETSTLKE 82 + I + D+K + ++K + R + S + + QA E + ++ A + ++K+ Sbjct: 883 DSISAADKKYKETVEKADKERYENGTMSKKQYDEVVKQAKKERDDAVAAATEKRDKSIKK 942 Query: 83 QLPILEK 89 ++ Sbjct: 943 AQETHKE 949 >gi|297736796|emb|CBI25997.3| unnamed protein product [Vitis vinifera] Length = 1997 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 13/112 (11%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI-G 59 M DI +R+N L K + + + N N+ Q+ G Sbjct: 1173 MKDIDEMRKNFLELKEDCKN---------FQEAHTTIKEADFMLNALLKE-NENAKQVTG 1222 Query: 60 QAIAEGNLSLVDA--LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVP 109 G LV+ L E LK + + E E + + + + + Sbjct: 1223 MWKQAGEEWLVEKASLIKEVEQLKSLIQLKEGENTVLQDHIHCSLVEMGDSM 1274 >gi|196008959|ref|XP_002114345.1| hypothetical protein TRIADDRAFT_58054 [Trichoplax adhaerens] gi|190583364|gb|EDV23435.1| hypothetical protein TRIADDRAFT_58054 [Trichoplax adhaerens] Length = 1149 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 16/110 (14%) Query: 9 QNPEHLDIAL--------KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ++ E + KKR+ + E IL L R L K + + RN +I Sbjct: 675 EDIEKVVQQQHDQLLTEQKKRNDQY--EEILEL---RRQLRLKEQQLDNERNLREKEIKV 729 Query: 61 AIAE---GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 E L+ + +E + + L+ + + + Sbjct: 730 KEDELSGLEKQRQQEFIKRMEELRMKETRIEHQRLDYEKQLRTMEEKVKS 779 >gi|153871333|ref|ZP_02000531.1| ClpB protein [Beggiatoa sp. PS] gi|152072199|gb|EDN69467.1| ClpB protein [Beggiatoa sp. PS] Length = 826 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 6/74 (8%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A + +E S E I LD + L + E ++ ++ S E Sbjct: 360 IDLVDEAGSRIRMEIDSKPERIDKLDRRLIQLKIEREAMKKEKDRASK----LRLEKLHD 415 Query: 69 LVDALKNETSTLKE 82 ++ L+ E + L E Sbjct: 416 EIEQLEKELADLME 429 >gi|150402566|ref|YP_001329860.1| chromosome segregation protein SMC [Methanococcus maripaludis C7] gi|150033596|gb|ABR65709.1| chromosome segregation protein SMC [Methanococcus maripaludis C7] Length = 1189 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 8/95 (8%) Query: 9 QNPEHLDIALKKRHLEPQSE-YILS-----LDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +N E LK + E +++ IL L E+ ++ +++ N+ +I + Sbjct: 380 ENLETEKKKLKSKVEESETQTEILKQQERKLSERINESQNELYNLKNEFNALENEINKKS 439 Query: 63 AE--GNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 N +++ L+ E +K + + E+ Sbjct: 440 FNLTKNQEIIETLQKELDDIKSESEDTKVLYKELE 474 >gi|119586308|gb|EAW65904.1| bromodomain adjacent to zinc finger domain, 1A, isoform CRA_e [Homo sapiens] Length = 1560 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 637 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 694 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + + ++ Sbjct: 695 EDEQRNSTADISIGEEEREDF 715 >gi|88769947|gb|ABD51463.1| F3L [Squirrel poxvirus] Length = 496 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 6/97 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 +RQN + L +P + + R L + ++ A R I ++ + Sbjct: 101 LRQNLDAAQKKL-----DPVKKQATERAAEVRKLKQDLKQTEAERAMMQK-ILAEKSKED 154 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 LV L + L+E ++E E ++ + Sbjct: 155 TELVQKLNAMSKDLEESRKVVESAEKARQAAEQSTTL 191 >gi|32967603|ref|NP_038476.2| bromodomain adjacent to zinc finger domain protein 1A isoform a [Homo sapiens] gi|116241266|sp|Q9NRL2|BAZ1A_HUMAN RecName: Full=Bromodomain adjacent to zinc finger domain protein 1A; AltName: Full=ATP-dependent chromatin-remodeling protein; AltName: Full=ATP-utilizing chromatin assembly and remodeling factor 1; Short=hACF1; AltName: Full=CHRAC subunit ACF1; AltName: Full=Williams syndrome transcription factor-related chromatin-remodeling factor 180; Short=WCRF180; AltName: Full=hWALp1 gi|6942227|gb|AAF32366.1|AF221130_1 chromatin remodeling factor WCRF180 [Homo sapiens] gi|119586304|gb|EAW65900.1| bromodomain adjacent to zinc finger domain, 1A, isoform CRA_a [Homo sapiens] gi|162319394|gb|AAI56492.1| Bromodomain adjacent to zinc finger domain, 1A [synthetic construct] Length = 1556 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 633 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 690 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + + ++ Sbjct: 691 EDEQRNSTADISIGEEEREDF 711 >gi|7920301|gb|AAF70601.1|AF213467_1 ATP-dependent chromatin remodelling protein [Homo sapiens] Length = 1556 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 633 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 690 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + + ++ Sbjct: 691 EDEQRNSTADISIGEEEREDF 711 >gi|319411709|emb|CBQ73753.1| related to NUM1-nuclear migration protein [Sporisorium reilianum] Length = 2365 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 16/95 (16%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRIL----------IKKIEDIRARRNSNSAQIGQAIAE 64 AL R E +S L+ +++ L K++E +A + I Sbjct: 1089 RQALATRDAELESAK-KELEARSKELDARAQELASRTKELESAKAEIDELQKSIASL--- 1144 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + + LK + + L++ E+E E S+L Sbjct: 1145 --RAETEQLKQQLAELQKSHTAAERELSETKSNLD 1177 >gi|313892234|ref|ZP_07825827.1| hypothetical protein HMPREF9220_0358 [Dialister microaerophilus UPII 345-E] gi|313119372|gb|EFR42571.1| hypothetical protein HMPREF9220_0358 [Dialister microaerophilus UPII 345-E] Length = 399 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 21/41 (51%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 + ++ + I +D K + I++++A+RN + I + Sbjct: 226 KSVKENTNKITEVDRKASKALTDIDELKAKRNDVAKDIAEL 266 >gi|154310710|ref|XP_001554686.1| hypothetical protein BC1G_06829 [Botryotinia fuckeliana B05.10] gi|150851369|gb|EDN26562.1| hypothetical protein BC1G_06829 [Botryotinia fuckeliana B05.10] Length = 1322 Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 7/84 (8%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 +R+ E L L E ++ + L + D+ + N A+I E Sbjct: 679 LREEIEDLQDNLLLIGQECVVAK-----DRIKELQTEKSDLEEKANKLEAEI--QSQENG 731 Query: 67 LSLVDALKNETSTLKEQLPILEKE 90 + D ++ E + LKEQL I+E + Sbjct: 732 KTASDEMEKEKTALKEQLAIVESK 755 >gi|332819926|ref|XP_001170763.2| PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform 1 [Pan troglodytes] Length = 321 Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 11/114 (9%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 N + + L+++ E + I+ ++ L+K+ ++A Sbjct: 12 NNDAVLKRLEQKGAEA--DQIIEYLKQQVSLLKEKAILQATLKEEKKL---------RVE 60 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 LK E LK++L E + N + E I ++ + Sbjct: 61 NAKLKKEIEELKQELIQAEIQNGVKQIPFPSGTPLQANSMVSENVIQSTPVTTV 114 >gi|224117940|ref|XP_002331516.1| predicted protein [Populus trichocarpa] gi|222873740|gb|EEF10871.1| predicted protein [Populus trichocarpa] Length = 219 Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 42/105 (40%), Gaps = 18/105 (17%) Query: 1 MLD-----IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN 52 M+D I+ +R ++ E + + + + E +L+ + L +K++ +++ Sbjct: 104 MIDRLHHYIRELRMRRKSMEAVKK-QNRSFEDGKVEETKALETEVSTLQEKLKQLQSELE 162 Query: 53 SNSAQI-------GQAIA--EGNLSLVDALKNETSTLKEQLPILE 88 S ++ EG L D L E L+ QL ++ Sbjct: 163 VKSKEVNTSEANAAALSKQSEGFLLEYDRLLEENQNLRSQLQSMD 207 >gi|149039796|gb|EDL93912.1| kinesin family member 27 [Rattus norvegicus] Length = 1240 Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Query: 9 QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 ++ + L +R + + LDE+ + L +++E + ++R + + Sbjct: 898 EDTDAF--NLNRRKGPFRSVDQLQKLDEQRKWLDEEVEKVLSQRQELEMLEEELKKREAI 955 Query: 68 -SLVDALKNETSTLKEQ 83 S +AL E S L+ + Sbjct: 956 VSKKEALLQEKSHLENK 972 >gi|34596303|gb|AAQ76831.1| GRINL1A combined protein Gcom11 precursor [Homo sapiens] Length = 397 Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 183 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 242 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 243 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 301 >gi|2039304|gb|AAB52993.1| hTRIP [Homo sapiens] Length = 469 Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 51/141 (36%), Gaps = 31/141 (21%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNS----N 54 LD ++++ +++ L ++ D++ R I+ +R RN+ Sbjct: 74 LDREFLKNELDNVRAQLSQK------------DKEKRDSQVIIDTLRDTLEERNATVVSL 121 Query: 55 SAQIGQA-------IAEGN-----LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 +G+A + + E L+ ++ +E+ E + S L ++ Sbjct: 122 QQALGKAEMLCSTLKKQMKYLEQQQDETKQAQEEAGRLRSKMKTMEQIELLLQSQLPEVE 181 Query: 103 SCIPNVPLEEVPIGTSANENI 123 I ++ + + + A + Sbjct: 182 EMIRDMGVGQSAVEQLAVYCV 202 >gi|84043670|ref|XP_951625.1| NUP-1 protein [Trypanosoma brucei TREU927] gi|33348555|gb|AAQ15880.1| NUP-1 protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|62359196|gb|AAX79640.1| NUP-1 protein, putative [Trypanosoma brucei] Length = 3647 Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 49/123 (39%), Gaps = 5/123 (4%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRIL---IKKIEDIRARRNSNSAQIGQA 61 + + N E L ++L++ + + Y+ LDE + L ++ E++ A R + + ++ + Sbjct: 3332 RQLESNQEELLLSLEQ-NSSQSNAYLEDLDEIRQQLVEMRQQREELIAERRTLTERVDEL 3390 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 V LK + ++L QL + + +S ++ E + Sbjct: 3391 -GRERGEEVSRLKQQNNSLSAQLQASRNKLSALEASKREGELAARQQAEELAKAFSLMEA 3449 Query: 122 NIL 124 + Sbjct: 3450 QVQ 3452 >gi|332817236|ref|XP_001149055.2| PREDICTED: TRAF-interacting protein [Pan troglodytes] Length = 469 Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 50/141 (35%), Gaps = 31/141 (21%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNS----N 54 LD ++++ +++ L ++ D++ R I+ +R RN+ Sbjct: 74 LDAEFLKNELDNIRAQLSQK------------DKEKRDSQVIIDTLRDTLEERNATVVSL 121 Query: 55 SAQIGQA-------IAEGN-----LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 +G+A + + E L+ ++ +E+ E + S ++ Sbjct: 122 QQALGKAEMLCSTLKKQMKYLEQQQDETKQAQEEARRLRSKMKTMEQIELLLQSQRPEVE 181 Query: 103 SCIPNVPLEEVPIGTSANENI 123 I ++ + + + A + Sbjct: 182 EMIRDMGVGQSAVEQLAVYCV 202 >gi|296201254|ref|XP_002747956.1| PREDICTED: myosin-4 [Callithrix jacchus] Length = 1940 Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 7/116 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ R N + + K+R+ + E+ ++E + S S ++ + Sbjct: 1434 MIDVE--RSNAACIALDKKQRNFDKVLAEWKQKYEE---TQAELEASQKESRSLSTELFK 1488 Query: 61 AIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 E +L ++ LK E L++++ L ++ E + +L + E+ Sbjct: 1489 VKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKHIHELEKVKKQIEHEKSE 1544 >gi|297696739|ref|XP_002825536.1| PREDICTED: GRINL1A complex locus protein 1-like isoform 1 [Pongo abelii] Length = 466 Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|123480039|ref|XP_001323175.1| hypothetical protein [Trichomonas vaginalis G3] gi|121906034|gb|EAY10952.1| hypothetical protein TVAG_260380 [Trichomonas vaginalis G3] Length = 1859 Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 2/110 (1%) Query: 26 QSEYILSLDEKNR-ILIKKIED-IRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 ++ I D+K + K+ E+ +R + + Q E K + LK+ Sbjct: 710 DADRIKEEDQKRKIEKQKEREEKLRQMQKEKEERQRQLQKEREEKQRQIQKEKDEKLKQL 769 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 L E+++ + S + + PLEE + +S E I +KPS Sbjct: 770 LKEKEEKQRQSFDSEVDIPDLETSSPLEEESLHSSPKEKIKRSEKSQKPS 819 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 12/91 (13%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED----IRARRNSNSAQIGQAIAE 64 Q+ + + +KR +E Q E +EK R + K+ E+ ++ R QI + Sbjct: 709 QDADRIKEEDQKRKIEKQKER----EEKLRQMQKEKEERQRQLQKEREEKQRQI----QK 760 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 + L E + Q E + ++ Sbjct: 761 EKDEKLKQLLKEKEEKQRQSFDSEVDIPDLE 791 >gi|15896443|ref|NP_349792.1| glycyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|59798597|sp|Q97EB8|SYG_CLOAB RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA ligase; Short=GlyRS gi|15026266|gb|AAK81132.1|AE007815_2 Glycyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325510601|gb|ADZ22237.1| glycyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 462 Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 57/190 (30%), Gaps = 13/190 (6%) Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTS 232 L F+ D H + + + + M+ T Q ++ T+ Sbjct: 122 WSNEKLENFIKDKHIKCPKCGKENFTSIRKFNLMFKTFQGVTEDAS----SEIYLRPETA 177 Query: 233 EVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE 292 + N + + K +P + +FR+E R +F + EL + Sbjct: 178 QGIFVNFKNVQRSSRKKVPFGIGQIGKAFRNEI----TPGNFTFRTREFEQMELEFFCKP 233 Query: 293 EDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYRE 349 + L L + + R +L F + T D+E + E Sbjct: 234 GTDLEWFKYWKDYCWSFLLDLGINKENLRFRDHSAEELVFYSKATSDIEYKFPF--GWGE 291 Query: 350 ISSCSTCGNF 359 + + ++ Sbjct: 292 LWGVADRTDY 301 >gi|312131267|ref|YP_003998607.1| hypothetical protein Lbys_2592 [Leadbetterella byssophila DSM 17132] gi|311907813|gb|ADQ18254.1| hypothetical protein Lbys_2592 [Leadbetterella byssophila DSM 17132] Length = 1080 Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 42/101 (41%), Gaps = 5/101 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD + + E + R+L+ + + L L ++ +KIE+ + + + Sbjct: 617 LDEKSL-DQLEKFNKNQ--RNLDKELDRTLKLFQEL-QRKQKIEETSNELKELAEEQEKL 672 Query: 62 I-AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 A+ N + + + +K++L +E +E+ S + Sbjct: 673 SEADANPQDQEKINQKFEDIKKKLEDIENRSNELNKSFDPM 713 >gi|289616807|emb|CBI56470.1| unnamed protein product [Sordaria macrospora] Length = 2426 Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 32/342 (9%), Positives = 90/342 (26%), Gaps = 34/342 (9%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRAR----RNSNSAQI----------- 58 ++ ++R + ++ + +++ R E+++ R + I Sbjct: 1956 IEEVERRRQADLEAARLAKEEQERRAREH-AENLKREAQVARKAEEEAIRRAMEEARIRR 2014 Query: 59 -GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 +A + LK E K++ ++ ++ I + Sbjct: 2015 EAEARVSREKEEAERLKREAEQQKKESEQQRMAAEQLKKEAQEAIERAEREEARKKAAEE 2074 Query: 118 -SANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 + ++ + + + L ++ E+ Sbjct: 2075 VKRRKKAQRKAEAETKREAEAAASRVKAEGEERLRAILGIQQVDNTLTFCEQKATPFHEQ 2134 Query: 177 ALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLI----PTS 232 + E A + + + + + + + + PT Sbjct: 2135 QILMQEAWHQIDESLLLSQQAHDTLLRAQYHNSEAFRQLGEADLLISLSQGVSEDLEPTQ 2194 Query: 233 EVSLTNL---YSHEIIESKSLPLRFTTLAPSFR------SEAGSAGRDTRGMLRQHQFWK 283 + + E + R A ++ +E G G+ +H Sbjct: 2195 DAPCLISARHHFDEALLQAQEGYRLLQEAWNYHDSSTRTAEEGHRLLVEVGLEGEHLRTS 2254 Query: 284 CE---LVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSL 322 E + + E++F + E EE R+ + + V Sbjct: 2255 QEYSFVEACHHNEEAFQKAEEARRVLEEAFTRMGIPHHFVKD 2296 >gi|238489105|ref|XP_002375790.1| intracellular protein transport protein (UsoA), putative [Aspergillus flavus NRRL3357] gi|220698178|gb|EED54518.1| intracellular protein transport protein (UsoA), putative [Aspergillus flavus NRRL3357] Length = 1217 Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 32/91 (35%), Gaps = 12/91 (13%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSN-------SAQIGQAI-----AEGNLSLVDALKNE 76 + + + +I +++ + + +A A+ + +D L+ E Sbjct: 1089 EVKEKEAARKSTQTEITELQRELEKVKLEAKDQAEEARKAKENESVAQKSTQEIDELRKE 1148 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 LK ++ E+ S L+ L+ + Sbjct: 1149 LEKLKSEVKEKEEARKSAQSELEDLLIVFGD 1179 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 32/106 (30%), Gaps = 23/106 (21%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ +R+ E + + ++ E D + + + + R +A Sbjct: 1015 IEGLRKELEQVRS--EAKNAE---------DAARKSAQSEADKL---RKELEKVKSEAKR 1060 Query: 64 EGN---------LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S + L+ E K ++ E + + + Sbjct: 1061 TEDATRKSSKSTKSEAEGLRKELEKAKLEVKEKEAARKSTQTEITE 1106 >gi|56550527|dbj|BAD77934.1| AousoA [Aspergillus oryzae] Length = 1216 Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 32/91 (35%), Gaps = 12/91 (13%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSN-------SAQIGQAI-----AEGNLSLVDALKNE 76 + + + +I +++ + + +A A+ + +D L+ E Sbjct: 1089 EVKEKEAARKSTQTEITELQRELEKVKLEAKDQAEEARKAKENESVAQKSTQEIDELRKE 1148 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 LK ++ E+ S L+ L+ + Sbjct: 1149 LEKLKSEVKEKEEARKSAQSELEDLLIVFGD 1179 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 32/106 (30%), Gaps = 23/106 (21%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ +R+ E + + ++ E D + + + + R +A Sbjct: 1015 IEGLRKELEQVRS--EAKNAE---------DAARKSAQSEADKL---RKELEKVKSEAKR 1060 Query: 64 EGN---------LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + S + L+ E K ++ E + + + Sbjct: 1061 TEDATRKSSKSTKSEAEGLRKELEKAKLEVKEKEAARKSTQTEITE 1106 >gi|313243882|emb|CBY34761.1| unnamed protein product [Oikopleura dioica] Length = 2650 Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Query: 7 IRQNPEHLDIALKKRH------LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +R++ E+ + K+++ L +++ + + +E+ + L E+ + +N Q+ + Sbjct: 688 LRKDLENGEKEEKRKNAFLLKELSDKNDEVNNFNEELKGLQDNFENEKTEKNEMIKQLEK 747 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPI 86 I + + L++E + E L Sbjct: 748 DI-QKKDDEIKELQDEVAGFNEDLEQ 772 >gi|308468736|ref|XP_003096609.1| hypothetical protein CRE_01205 [Caenorhabditis remanei] gi|308242481|gb|EFO86433.1| hypothetical protein CRE_01205 [Caenorhabditis remanei] Length = 225 Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 44/101 (43%), Gaps = 12/101 (11%) Query: 5 QWIRQNPEHLDIA--LKKRHLEPQSEYILSL---------DEKNRILIKKIEDIRARRNS 53 + +R + E A L +++++ + + L D K + ++ +D++ ++ + Sbjct: 123 KTLRDDLEEAKEAARLAEKNVKELRDLAVRLTKTIHNDDMDMKKKENQQRYQDLQDKKKA 182 Query: 54 NSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 + E ++V+ L+ + S +++ +E++ Sbjct: 183 ELRAALELKKE-KEAIVEELERKISLMEKGDVGVEEDHFCR 222 >gi|295101509|emb|CBK99054.1| prolyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6] Length = 479 Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 71/191 (37%), Gaps = 11/191 (5%) Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 + + PTSE + +S + + LP+++ R E + TR LR +FW Sbjct: 109 ERLAVRPTSETMFCDHWSRVLHSYRELPMKYNQWCSVVRWE-----KTTRPFLRSREFWW 163 Query: 284 CELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 E T E +++ A+ + L + + A TY +E + Sbjct: 164 QEGHTIHETAAEAEAETQQQLNCYADVCEQDLAIPVVKGRKTDKEKFAGAEATYTIEA-M 222 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 + + G+ S+ + + +++ T GV+ R + AI+ + Sbjct: 223 MKDGKALQSGTSHYFGDKFSKAYDVTFTGRDNQLHHPFQT--SWGVST-RLVGAIIMTHG 279 Query: 402 NADGSVTIPTV 412 + DG + P V Sbjct: 280 DDDGLILPPAV 290 >gi|255540135|ref|XP_002511132.1| zinc finger protein, putative [Ricinus communis] gi|223550247|gb|EEF51734.1| zinc finger protein, putative [Ricinus communis] Length = 816 Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 9/92 (9%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE--------YILSLDEKNRILIKKIEDIRARRNSN 54 +I ++Q + L LKKR E Q E SL+ + + +KIE++ + S Sbjct: 706 NINELKQENQELRERLKKREAEFQGEMMHGSMCNKCKSLEIQLQEAQQKIEELNKEQESL 765 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPI 86 + + + L+ + + Sbjct: 766 IDIFSEERDRRDKEE-ENLRKKYKDASNTIQQ 796 >gi|255953611|ref|XP_002567558.1| Pc21g05120 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589269|emb|CAP95409.1| Pc21g05120 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1448 Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAIAEGNLSLVDALKNETS 78 R + Q+E + +L+E+ R K ++ + RR S Q +A+ E ++A K Sbjct: 1071 REKDAQAERLRALEEQVRQGKIKKQEEKRRREEASRQAKEQEAMLEAQRVELEAAKERER 1130 Query: 79 TLKEQLPILEKEEHEVCSSLK 99 L+ +L L++ + Sbjct: 1131 QLQRELEGLDESSSDDEGPAD 1151 >gi|149041884|gb|EDL95725.1| rCG57880, isoform CRA_b [Rattus norvegicus] Length = 1238 Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 5/77 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 +R++ L LK R++ + E R L +K E++ + S + +E Sbjct: 862 LRKDLAALQKELKDRNV-----LVEEAREAERALSRKTEELGKQLKELSQKYSDVKSERE 916 Query: 67 LSLVDALKNETSTLKEQ 83 + + K + L Q Sbjct: 917 KLVEEKAKQTSEILAAQ 933 >gi|145553100|ref|XP_001462225.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430063|emb|CAK94852.1| unnamed protein product [Paramecium tetraurelia] Length = 739 Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 15/114 (13%) Query: 7 IRQNPEHLD---IALKKRHLE---PQSEYILSLDEKNRILIKKIEDIRAR---RNSNSAQ 57 +R+ E D L R LE + + L + + L K+ D++ S + Sbjct: 134 LREKAEKYDHHLELLNGRDLEDILSDLDELEKLRKLVKDLQAKLSDMQKELDALKKKSKE 193 Query: 58 IGQAIAEGNLS---LVDALKNETS---TLKEQLPILEKEEHEVCSSLKKLISCI 105 + + VD L+ + LK++L KE ++ L + Sbjct: 194 LDDMKKKLGDDPNKEVDKLRKQQKDQEDLKKKLADALKEIEQLKKLLNDKTAEC 247 >gi|123472216|ref|XP_001319303.1| WW domain containing protein [Trichomonas vaginalis G3] gi|121902083|gb|EAY07080.1| WW domain containing protein [Trichomonas vaginalis G3] Length = 897 Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 37/137 (27%), Gaps = 12/137 (8%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN----SAQIGQAIAE 64 N + L+ + L + E I+ + N+ S QI Q ++ Sbjct: 200 NNINKIREQQA--------AEQNELNGQIAQLQAEKERIQKQINTIKEENSKQIAQLKSD 251 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 +L + N L Q KE +++ E + + Sbjct: 252 HEKALKEENDNFQKQLNAQKSQFTKELNKLKEDQNNSAVIKSQQSQEIQKLNEQHEISKK 311 Query: 125 IRSVGKKPSAIHLSREH 141 + + EH Sbjct: 312 KLLSMQTDEINKIKAEH 328 >gi|47565281|ref|ZP_00236323.1| S-layer homology domain protein [Bacillus cereus G9241] gi|208742166|ref|YP_002267618.1| S-layer protein [Bacillus cereus] gi|47557635|gb|EAL15961.1| S-layer homology domain protein [Bacillus cereus G9241] Length = 630 Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 45/98 (45%), Gaps = 1/98 (1%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 ++ +++ E L+ L + + + + LDE + +I+ + +R+ QI + Sbjct: 228 LKELQKKREELNKQLIESEKQVSRDELKKLDELKNEKVNQIKALMKQRDEIKEQIKKEED 287 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 EGN D+LK + + + +Q ++ E + ++ Sbjct: 288 EGNRER-DSLKKQLTDINKQEAQHQELEKLLQQLEQRQ 324 >gi|167383153|ref|XP_001736426.1| hypothetical protein [Entamoeba dispar SAW760] gi|165901213|gb|EDR27331.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 511 Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 21/177 (11%), Positives = 49/177 (27%), Gaps = 11/177 (6%) Query: 35 EKNRILIKKIEDIRARRNSN--SAQIGQAIAE-------GNLSLVDALKNETSTLKEQLP 85 +K + KK E ++ + N + +IG + S D L E L+E+L Sbjct: 337 KKRQEEQKKEETMKHQLNELKYNKEIGILKEKELAQQNNEKQSDKDDLMKEVQELQEKLN 396 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 +KE + S +K ++ + E+ N + S + + + Sbjct: 397 TKKKERLVIKSEEEKKLNECIEM--EKEIKELQENHLRIEEQFKLLKSYVDKFNDKKWLC 454 Query: 146 EALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + + ++ + + Sbjct: 455 LMKEEEQIELLATIVVQYKLSHQQVYEKSVIQIFDEIVSKKIPINEWKSYVVSAFNN 511 >gi|158257776|dbj|BAF84861.1| unnamed protein product [Homo sapiens] Length = 469 Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 50/141 (35%), Gaps = 31/141 (21%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNS----N 54 LD ++++ +++ L ++ D++ R I+ +R RN+ Sbjct: 74 LDAEFLKNELDNVRAELSQK------------DKEKRDSQVIIDTLRDTLEERNATVVSL 121 Query: 55 SAQIGQA-------IAEGN-----LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 +G+A + + E L+ ++ +E+ E + S ++ Sbjct: 122 QQALGKAEMLCSTLKKQMKYLEQQQDETKQAQEEARRLRSKMKTMEQIELLLQSQRPEVE 181 Query: 103 SCIPNVPLEEVPIGTSANENI 123 I ++ + + + A + Sbjct: 182 EMIRDMGVGQSAVEQLAVYCV 202 >gi|332075655|gb|EGI86123.1| putative cell surface protein [Streptococcus pneumoniae GA17545] Length = 509 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 30/77 (38%), Gaps = 5/77 (6%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E + I ++++ + L K++ + +++ + L++E +LK + Sbjct: 145 ELSKDDISKMEKEAKELQDKLDKLNCELKDKDK-----LSDKQKEKIKDLEDEIESLKGK 199 Query: 84 LPILEKEEHEVCSSLKK 100 + + + K+ Sbjct: 200 VKKDKGNKDLSVDMKKE 216 >gi|62088090|dbj|BAD92492.1| bromodomain adjacent to zinc finger domain, 1A isoform b variant [Homo sapiens] Length = 1188 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 2/81 (2%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 239 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 296 Query: 82 EQLPILEKEEHEVCSSLKKLI 102 E + + ++ Sbjct: 297 EDEQRNSTADISIGEEEREDF 317 >gi|17561158|ref|NP_507932.1| hypothetical protein F48F5.1 [Caenorhabditis elegans] Length = 1291 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 29/260 (11%), Positives = 67/260 (25%), Gaps = 36/260 (13%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYI----LSLDEKNRIL-----------IKKIEDI 47 D + IR E ++ R E + I +L+ K + ++ +++ Sbjct: 791 DNKEIRDEIE-----MEARQAEENEQRIAAEKNALEAKIKEKSNMRKVVDEQNQREKDEL 845 Query: 48 RARR-----NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 +A+ S + +I + + K K + + +++ + + +K Sbjct: 846 QAKLRADQEKSEARKIAEKKKDEQNQKEKEAKLRADQEKSEARKVAEKKKDEQNQKEKDK 905 Query: 103 SCIPNVPL-EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDF-DRATKL- 159 E+ A + +K I + DF + + K+ Sbjct: 906 LQAKLRADQEKSEARKIAEKKKKEEDEAQKVKNIWKHIKKMRFTTLRACADFIEGSWKIA 965 Query: 160 --------SGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQ 211 F L + + V + + Sbjct: 966 IATQTKLTVKDSFKYLPADKHRYGNIPCTPETAVEVMVNDKRVPIHANWVPTKCPKQEHR 1025 Query: 212 IPKFADDMFCTTDGRWLIPT 231 M T D W + Sbjct: 1026 FIATQGPMTNTFDDFWAMIA 1045 >gi|6580861|gb|AAF18328.1|AF146278_3 37K protein [Soil-borne cereal mosaic virus] Length = 326 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 17/93 (18%) Query: 1 ML--DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA----RRNSN 54 ML +I +++N E +L L E+ R KK+E +R+ +R + Sbjct: 231 MLPNNINILKENVPLFKK-----------ESVLDLTEQEREKQKKLETLRSVNETQRRKS 279 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + ++ + + + V K + + E Sbjct: 280 AQEMQKRNDDLIKANVQKQKAKQFEIDENRKNH 312 >gi|304440613|ref|ZP_07400497.1| lantibiotic protection ABC superfamily ATP binding cassette transporter [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370800|gb|EFM24422.1| lantibiotic protection ABC superfamily ATP binding cassette transporter [Peptoniphilus duerdenii ATCC BAA-1640] Length = 761 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 4/86 (4%) Query: 4 IQWIRQN-PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED-IRARRNSNSAQIGQA 61 I +R +L+ ++ E E + L E L ++++ +R S Sbjct: 456 INLMRDESINDYKKSLRDKNYEDNLEKLNRLKELRDKLQSELDNSLRME--EVSNLDELR 513 Query: 62 IAEGNLSLVDALKNETSTLKEQLPIL 87 N + +++ N L + Sbjct: 514 EKFKNSATEESVNNRIRELNRAIEFH 539 >gi|300869737|ref|YP_003784608.1| hypothetical protein BP951000_0098 [Brachyspira pilosicoli 95/1000] gi|300687436|gb|ADK30107.1| hypothetical protein BP951000_0098 [Brachyspira pilosicoli 95/1000] Length = 702 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 5/97 (5%) Query: 13 HLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 + AL+ + + E I L+ K + L + E I + S QI +A+ + Sbjct: 121 KIKEALQT-NKDTDKETSKLIKDLEGKLKALETEKEKIETQNKELSLQIKEALQTSKDAD 179 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 ++ K L+ +L L E+ ++ + K+L I Sbjct: 180 KESSK-LVKDLESKLKTLLTEKEKIEAQNKELNLQIK 215 >gi|221504763|gb|EEE30428.1| kinesin motor domain-containing protein, putative [Toxoplasma gondii VEG] Length = 775 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 86/235 (36%), Gaps = 9/235 (3%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L +R + ++ + + D++ + K+ + ++ Q+G A + + V+ L+ Sbjct: 285 QKLTERAVNAET-ALDATDKQLKETSKERDGLKKEAEEMKKQMGAA--QVIAAEVETLRG 341 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 ET T K +L LE+ + KK + I ++ ++ + + ++ Sbjct: 342 ETKTQKAKLTELEESYKQEKFLRKKYYNEIEDM-KGKIRVYCRVRPMAKYEIEKECKQSV 400 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 + + + D + + +R + + + Y + Sbjct: 401 F-PVDEYSVKVLTSKGDKEFMYDRTFPPECTQEEVYEDTKRLIQSVIDGFNVCIFAYGQT 459 Query: 196 SAPLLVRDEAMYGT-GQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIE 246 + + G G P+ +D+F T + +EV + LY++++I+ Sbjct: 460 GSGKTFTIQGGAGNPGIAPRAINDLFDTLDGFEKGKFKYEAEVYMCELYNNQLID 514 >gi|194226237|ref|XP_001493113.2| PREDICTED: similar to tetratricopeptide repeat domain 3 [Equus caballus] Length = 2028 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 20/193 (10%), Positives = 65/193 (33%), Gaps = 18/193 (9%) Query: 15 DIALKKRHLEP------QSEYILS-LDEKNRILIKKIEDIRARRNSNSAQIGQ------- 60 + L KR++E + ++ L L+++ + ++ +DI+ R + ++ + Sbjct: 1556 EEKL-KRNVEENKISKTELDWFLEDLEKEIKKWQQEKKDIQERLKALKKKMKRVLNACDM 1614 Query: 61 --AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 +G+ + L +++ + + + E K+ + Sbjct: 1615 YTQKKDGDDKEHELLLDQSLEISNTFTNEKMKIEECIKKGKEHYEECLQRAVAAEVSVLE 1674 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178 + + + S ++ ++ + D + ++ +E+A Sbjct: 1675 NQKETELYKLQIMESQAEGYLKNLKLMSSDSAAYPDVESDRHSWES-FVSDVGKEIEKAK 1733 Query: 179 GQFMIDLHTSEHG 191 QF + ++G Sbjct: 1734 SQFEEQIQAIKNG 1746 >gi|307078146|ref|NP_001182493.1| uveal autoantigen with coiled-coil domains and ankyrin repeats [Rattus norvegicus] Length = 1410 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 5/77 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 +R++ L LK R++ + E R L +K E++ + S + +E Sbjct: 1034 LRKDLAALQKELKDRNV-----LVEEAREAERALSRKTEELGKQLKELSQKYSDVKSERE 1088 Query: 67 LSLVDALKNETSTLKEQ 83 + + K + L Q Sbjct: 1089 KLVEEKAKQTSEILAAQ 1105 >gi|123190795|ref|XP_001282364.1| hypothetical protein [Trichomonas vaginalis G3] gi|121839369|gb|EAX69434.1| hypothetical protein TVAG_581540 [Trichomonas vaginalis G3] Length = 334 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 37/85 (43%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV 70 + + +K R L +++ S ++ +KI+ ++ N Q + S + Sbjct: 48 LKSIKKYMKLRILNSIVDFLDSKGKEIYDSTEKIQKLQTELNEIPKQKSDNEIQSLQSQL 107 Query: 71 DALKNETSTLKEQLPILEKEEHEVC 95 + + E++ LKE+L +E ++ Sbjct: 108 NQINEESNKLKEKLNEMESNTNQAD 132 >gi|157864594|ref|XP_001681007.1| hypothetical protein [Leishmania major strain Friedlin] gi|68124300|emb|CAJ07062.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 1134 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 5/76 (6%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS-----TLKEQLPILE 88 DE+ R L + E R + + S + AE ++ V+ + L+E++ LE Sbjct: 155 DERRRELQHERELARIKEEAASRAVSAQKAEEVMAAVEQSLQKMQSAMQEQLREEVRGLE 214 Query: 89 KEEHEVCSSLKKLISC 104 + ++ Sbjct: 215 AAHRSELTRREEEWVH 230 >gi|27227801|emb|CAD59409.1| SMC1 protein [Oryza sativa] Length = 1264 Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 28/113 (24%) Query: 23 LEPQSEYIL-SLDEKNRILIKKIED-------IRARRNSNS----------AQIGQAIAE 64 +E +E I L+E R L + +E+ + A++ S I + E Sbjct: 247 IEKDAEKIEAELEEDRRSLQQVLEENQSSDYELSAKKKEQSGFLKKMTLCEKSIAKKKLE 306 Query: 65 GNL----------SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + + LK + S LK ++ KE + KK + + + Sbjct: 307 LDKRVSLMWAVVQPELLRLKEQISRLKSKIKSCNKEIDKKKDDSKKHLEEMKS 359 >gi|238883589|gb|EEQ47227.1| conserved hypothetical protein [Candida albicans WO-1] Length = 241 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 23/67 (34%) Query: 34 DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHE 93 D + + L + + + +R S Q A +G+ L E+ + Q ++ E Sbjct: 25 DSEYKRLRSEADRLFQKRQQLSQQSQNAYKQGDGQKAHELSEESKRILAQAEECNRKAAE 84 Query: 94 VCSSLKK 100 Sbjct: 85 YVFRENN 91 >gi|237839783|ref|XP_002369189.1| kinesin heavy chain-like protein, putative [Toxoplasma gondii ME49] gi|211966853|gb|EEB02049.1| kinesin heavy chain-like protein, putative [Toxoplasma gondii ME49] gi|221484569|gb|EEE22863.1| kinesin motor domain-containing protein, putative [Toxoplasma gondii GT1] Length = 775 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 86/235 (36%), Gaps = 9/235 (3%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L +R + ++ + + D++ + K+ + ++ Q+G A + + V+ L+ Sbjct: 285 QKLTERAVNAET-ALDATDKQLKETSKERDGLKKEAEEMKKQMGAA--QVIAAEVETLRG 341 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 ET T K +L LE+ + KK + I ++ ++ + + ++ Sbjct: 342 ETKTQKAKLTELEESYKQEKFLRKKYYNEIEDM-KGKIRVYCRVRPMAKYEIEKECKQSV 400 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 + + + D + + +R + + + Y + Sbjct: 401 F-PVDEYSVKVLTSKGDKEFMYDRTFPPECTQEEVYEDTKRLIQSVIDGFNVCIFAYGQT 459 Query: 196 SAPLLVRDEAMYGT-GQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIE 246 + + G G P+ +D+F T + +EV + LY++++I+ Sbjct: 460 GSGKTFTIQGGAGNPGIAPRAINDLFDTLDGFEKGKFKYEAEVYMCELYNNQLID 514 >gi|149041883|gb|EDL95724.1| rCG57880, isoform CRA_a [Rattus norvegicus] Length = 1408 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 5/77 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 +R++ L LK R++ + E R L +K E++ + S + +E Sbjct: 1032 LRKDLAALQKELKDRNV-----LVEEAREAERALSRKTEELGKQLKELSQKYSDVKSERE 1086 Query: 67 LSLVDALKNETSTLKEQ 83 + + K + L Q Sbjct: 1087 KLVEEKAKQTSEILAAQ 1103 >gi|20094208|ref|NP_614055.1| hypothetical protein MK0771 [Methanopyrus kandleri AV19] gi|19887233|gb|AAM01985.1| Uncharacterized protein [Methanopyrus kandleri AV19] Length = 609 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 49/104 (47%), Gaps = 7/104 (6%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +++ +++ + + R L+ +++ + L ++ L K++++++ R+ + ++ Sbjct: 212 NLKKLKEKYNEIKEE-RDR-LKEETKEVGKLKDQLAKLQSKLKEVKSERDDLANEVEALR 269 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 E + L+ + LK +L L+K+ + L+K I Sbjct: 270 NEN-----EKLRKKIDKLKSELSNLQKKLKDREKKLEKARQHIG 308 >gi|18410584|ref|NP_565083.1| ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding [Arabidopsis thaliana] gi|21264430|sp|P42730|HS101_ARATH RecName: Full=Heat shock protein 101 gi|6715468|gb|AAF26423.1|AF218796_1 heat shock protein 101 [Arabidopsis thaliana] gi|12324908|gb|AAG52410.1|AC020579_12 heat shock protein 101; 13093-16240 [Arabidopsis thaliana] gi|332197455|gb|AEE35576.1| heat shock protein 101 [Arabidopsis thaliana] Length = 911 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 2/99 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 392 IDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEREKDKASKARLIEVRKELDD 451 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 L D L+ T +++ +++ + + S Sbjct: 452 LRDKLQPLTMKYRKEKERIDEIRRLKQKREELMFSLQEA 490 >gi|14590782|ref|NP_142852.1| chromosome segregation protein [Pyrococcus horikoshii OT3] gi|18202079|sp|O58687|RAD50_PYRHO RecName: Full=DNA double-strand break repair rad50 ATPase gi|3257342|dbj|BAA30025.1| 879aa long hypothetical purine NTPase [Pyrococcus horikoshii OT3] Length = 879 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 2/87 (2%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 DI+ + L ++ E + E ++ L + + L K+E++ RR+ + I + Sbjct: 641 DIEKVTSQLNELQRKFDQKKYEEKREKMMKLSMEIKGLETKLEELERRRDEIKSTIEKLK 700 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEK 89 E ++ K E L + +E+ Sbjct: 701 EERK--ERESAKMELEKLNIAIKRIEE 725 >gi|322815339|gb|EFZ24011.1| hypothetical protein TCSYLVIO_9871 [Trypanosoma cruzi] Length = 1200 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 41/96 (42%), Gaps = 1/96 (1%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 ALK+ + I SL ++ L + I++I+ ++++ A++ +A A+ + + Sbjct: 751 KEALKRTKEDYSV-KIQSLRDRADRLRQLIDEIQHEQDAHLAEVREAAAKKRAEDNERQR 809 Query: 75 NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 L+E+ L E E + + I + Sbjct: 810 KVLKELEEENHQLLMERDEDTKRTENYCALIEDETD 845 >gi|221129665|ref|XP_002154899.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 921 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 13/118 (11%), Positives = 32/118 (27%), Gaps = 8/118 (6%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAI------AEGNLSLVDALKNETSTLKEQLP 85 +++E + + + N I +G + LK L+E+ Sbjct: 367 AVEEARKKAQAMFDAAQKTLNKAQEDIAAVKAKIGKWKQGLNDYREKLKARERQLEEERS 426 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFE 143 + E C ++ + G + P+ I ++ + Sbjct: 427 KMTNNCAEECGTVCIPFFGWKDNC--FYIWGYPVGCPTWDNCKWRAPNLICIAGCEIK 482 >gi|213026905|ref|ZP_03341352.1| threonyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 168 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 28/88 (31%), Gaps = 3/88 (3%) Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 + P + +++ + + LPLR R+E A G++R F Sbjct: 13 ENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALH---GLMRVRGF 69 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEI 309 + + EE + + + Sbjct: 70 TQDDAHIFCTEEQIHEVNACIRMVYDMY 97 >gi|194755872|ref|XP_001960203.1| GF11644 [Drosophila ananassae] gi|190621501|gb|EDV37025.1| GF11644 [Drosophila ananassae] Length = 261 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 14/130 (10%), Positives = 43/130 (33%), Gaps = 6/130 (4%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 DE + + I++++ + + S + +A+A+ + ++ L NE L +QL L ++ Sbjct: 76 KFDEHEKSMQMIIQELQNEQQALSEALDEALAD-STDNLEDLNNEVKDLNKQLGNLSEDN 134 Query: 92 HE-----VCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE 146 ++ + + + + + +A Sbjct: 135 TCAICLFQWTTEGEHCLVSLRCGHLFGRKCIRRSVRMNHKCPICQKNANWRDIRKIYCSS 194 Query: 147 ALGLMDFDRA 156 + + + Sbjct: 195 GIMASNSENE 204 >gi|109017378|ref|XP_001116693.1| PREDICTED: nestin-like [Macaca mulatta] Length = 1619 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 8/75 (10%) Query: 15 DIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ-IGQAIAEGNLS--LV 70 + R LE + + SL+++N+ L+K +E +R + +G G + Sbjct: 570 RENQESPRSLEEDLDTLKSLEKENKELLKDVEVVR----PLEKEAVGLLKPIGKEDTQTL 625 Query: 71 DALKNETSTLKEQLP 85 L+ E L + L Sbjct: 626 QPLQKENQELMKSLE 640 >gi|55846700|gb|AAV67354.1| nestin [Macaca fascicularis] Length = 1554 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 8/75 (10%) Query: 15 DIALKK-RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ-IGQAIAEGNLS--LV 70 + R LE + + SL+++N+ L+K +E +R + +G G + Sbjct: 505 RENQESPRSLEEDLDTLKSLEKENKELLKDVEVVR----PLEKEAVGLLKPIGKEDTQTL 560 Query: 71 DALKNETSTLKEQLP 85 L+ E L + L Sbjct: 561 QPLQKENQELMKSLE 575 >gi|537446|gb|AAA67927.1| AtHSP101 [Arabidopsis thaliana] Length = 911 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 2/99 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 392 IDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEREKDKASKARLIEVRKELDD 451 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 L D L+ T +++ +++ + + S Sbjct: 452 LRDKLQPLTMKYRKEKERIDEIRRLKQKREELMFSLQEA 490 >gi|73960793|ref|XP_863552.1| PREDICTED: similar to CDC42-binding protein kinase alpha isoform B isoform 4 [Canis familiaris] Length = 1774 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 44/107 (41%), Gaps = 30/107 (28%) Query: 2 LDIQWIRQNPEHLDIALK---------------KRHLEPQSEYILSLDEKNRILIKKIED 46 L+I+ +++ E+L ++ +R L+ I + +++ R L ++ E+ Sbjct: 487 LEIKTLKEEIENLRKQIRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIRTLQQEREE 546 Query: 47 IRARRNSNSAQIGQAIA-----------EGNLSLVDALKNETSTLKE 82 + N + G+ + + + + LKN++ LK+ Sbjct: 547 L----NKRERETGRRRSRLCAGSLILTEQELVQASERLKNQSKELKD 589 >gi|54020514|ref|YP_115957.1| hypothetical protein mhp447 [Mycoplasma hyopneumoniae 232] gi|53987687|gb|AAV27888.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232] Length = 3969 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 9/145 (6%), Positives = 41/145 (28%), Gaps = 10/145 (6%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA------ 56 D + +R+N + + + E ++ ++ + ++ + + + N Sbjct: 3525 DPRKVRKNKDKVKSNFDRNKFEENISKSIANEQNYKKAVQSLGEENNKSNIELKLSWSGY 3584 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I + + + + +++++ + +E + Sbjct: 3585 KINNEFSSLLTQANNKWIDLVNKIEKKVKWTKPDEKKQNQVTWSRHWETK----PTNQKK 3640 Query: 117 TSANENILIRSVGKKPSAIHLSREH 141 N + R++ Sbjct: 3641 QKKNPKEVELQWFITYKQNQKERDN 3665 >gi|9635443|ref|NP_059452.1| putative movement protein [Soil-borne cereal mosaic virus] gi|5931710|emb|CAB56601.1| putative movement protein [Soil-borne cereal mosaic virus] Length = 326 Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 17/93 (18%) Query: 1 ML--DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR----ARRNSN 54 ML I +++N E +L L E+ R KK+E +R A+R + Sbjct: 231 MLPNSINILKENVPLFKK-----------ESVLDLTEQEREKQKKLETLRSVNEAQRRKS 279 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + ++ + + + V K + S + E Sbjct: 280 AQEMQKRNDDLIRANVQKQKAKQSEIDENRKNH 312 >gi|328870605|gb|EGG18978.1| hypothetical protein DFA_02221 [Dictyostelium fasciculatum] Length = 1105 Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Query: 39 ILIKKIEDIRARRNSNS---AQIGQAIAEGNLSLVDALKNETSTL 80 +K E ++AR N + QI A E + + V + + + + Sbjct: 863 ATQQKYETLKARLNKINESVKQISSAFYEKDNADVKQIIAKKNEI 907 >gi|328868220|gb|EGG16600.1| hook family protein [Dictyostelium fasciculatum] Length = 702 Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 11/99 (11%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 ++Q ++ + LKK+ E + +NR L +I+ +R I Sbjct: 268 HNLQLQIEDKDKYIYDLKKK-----IEEGIRQINENRELRDEIDILRE------KAITAE 316 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 E L E + LK+Q+ LE + Sbjct: 317 ATEEKLKKFQHKIEEINELKKQIRTLEDNNDNYLQQILD 355 >gi|292490953|ref|YP_003526392.1| peptidase C14 caspase catalytic subunit p20 [Nitrosococcus halophilus Nc4] gi|291579548|gb|ADE14005.1| peptidase C14 caspase catalytic subunit p20 [Nitrosococcus halophilus Nc4] Length = 874 Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 8/89 (8%) Query: 32 SLDEKNRILIKKIEDIR---ARRNS----NSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 L EK R + ++ RN +Q+G +A G +K L + Sbjct: 398 KLAEKWRQEQHNTQQLQLALNERNEEIRILQSQLGDLVA-GQEDAYAEIKALEEELSRRD 456 Query: 85 PILEKEEHEVCSSLKKLISCIPNVPLEEV 113 +E+++ E+ +K+ + + E Sbjct: 457 ARIEQQKRELEQQQQKIEQLMAEATVPEA 485 >gi|281211708|gb|EFA85870.1| C2 calcium/lipid-binding region-containing protein [Polysphondylium pallidum PN500] Length = 1410 Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN-----LSLVDALKNETSTLKEQLP 85 + LD+ N+ +E ++ RN+N+ IG N S + L+ E++ L E+L Sbjct: 379 IDLDKSNKEKRDVLEQLQIERNNNAKNIGDISTLQNQIISANSSYEKLQAESNQLVEKLR 438 Query: 86 ILEKE 90 + E + Sbjct: 439 VAETQ 443 >gi|242084878|ref|XP_002442864.1| hypothetical protein SORBIDRAFT_08g004060 [Sorghum bicolor] gi|241943557|gb|EES16702.1| hypothetical protein SORBIDRAFT_08g004060 [Sorghum bicolor] Length = 371 Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 38/124 (30%), Gaps = 5/124 (4%) Query: 13 HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 + L++R E E + + K + + E + R + E V+ Sbjct: 245 KVKENLRRRGGEACLEALDKMWAKKEVADNEKEKAKQER-----FMAALEVEKEALEVEK 299 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + T K Q+ + E E + ++ + + E+ + I+ + Sbjct: 300 KRLATEEKKAQIEEKKAEAKEKRAQAEETRAQADLLKHEKEIMFADPTSLNSIQREWLEK 359 Query: 133 SAIH 136 Sbjct: 360 MQKE 363 >gi|239908722|ref|YP_002955464.1| hypothetical protein DMR_40870 [Desulfovibrio magneticus RS-1] gi|239798589|dbj|BAH77578.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 278 Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 15/104 (14%) Query: 2 LDIQWIRQ-NPEHLDIAL-KKRHL-EPQSEYILSLDEK---NRILIKKIEDIRARRNSN- 54 LDI + + + ++ + R + + L+++ R L I+ + RN Sbjct: 93 LDINSLLERDLDNAKDRIVSLRGERDKLQAAVARLEDEMPLRRELQMGIDQLLEERNEAE 152 Query: 55 --------SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 S + A+ V L+ E L +++ LE Sbjct: 153 LRLRGMKRSQEQSAAVLAELRGRVAELEGERKELIDEIQFLETR 196 >gi|193216599|ref|YP_001999841.1| hypothetical lipoprotein [Mycoplasma arthritidis 158L3-1] gi|90019044|gb|AAT66126.2| MlpE [Mycoplasma arthritidis] gi|193001922|gb|ACF07137.1| hypothetical lipoprotein [Mycoplasma arthritidis 158L3-1] Length = 271 Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 5/71 (7%) Query: 22 HLEPQSEYILSLD---EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 E + L+ ++ R+L ++ D++ +I + I N + K Sbjct: 166 GFEKLVSELKKLENILQEKRLL--ELNDLKKEIAKKQEEIKKTIKADNNIDKEEAKKALP 223 Query: 79 TLKEQLPILEK 89 +KE+L E Sbjct: 224 KIKEELKKAED 234 >gi|300793885|ref|NP_001179869.1| bromodomain adjacent to zinc finger domain protein 1A [Bos taurus] Length = 1557 Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 +E + + ++ R L K E R R +A+I + E +K + LK Sbjct: 633 FIEDYVDILRQAKQEFREL--KAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLK 690 Query: 82 EQ 83 E Sbjct: 691 ED 692 >gi|57526709|ref|NP_998206.1| UBX domain protein 4 [Danio rerio] gi|40555755|gb|AAH64707.1| UBX domain protein 4 [Danio rerio] Length = 500 Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 5/67 (7%) Query: 22 HLEPQSEYILSLDEKNRILIKKIE---DIRAR--RNSNSAQIGQAIAEGNLSLVDALKNE 76 L+ + E + E+ R KK E +I+ R ++ + + L E Sbjct: 182 GLDVKVERLTKKLEERREQKKKAEDEKEIQKEVDRRKLGKEMLEYKKQQEEEKTRRLLEE 241 Query: 77 TSTLKEQ 83 + K + Sbjct: 242 RNREKME 248 >gi|54792259|emb|CAF18543.1| RAD50 protein [Gallus gallus] Length = 1250 Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 40/115 (34%), Gaps = 8/115 (6%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 R ++ + E + LD L + ED+ +R +++ +I ++A+K + + Sbjct: 903 REIKEEKEQVFPLDATLEKLQQDKEDLINKRTASNKEI--------QEKINAIKEKVKDI 954 Query: 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 + +E + KK C + ++ E I + Sbjct: 955 NKYTKEIENYIQQGKEEYKKQKECELDEVNSQLVACEKQKEKISKEMEIIRQDID 1009 >gi|332235764|ref|XP_003267073.1| PREDICTED: GRINL1A complex locus protein 1 isoform 1 [Nomascus leucogenys] Length = 550 Score = 36.7 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIKHLDDMVHCQQKKVKQM 370 >gi|313113439|ref|ZP_07799028.1| prolyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310624166|gb|EFQ07532.1| prolyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 479 Score = 36.7 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 71/191 (37%), Gaps = 11/191 (5%) Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 + + PTSE + +S + + LP+++ R E + TR LR +FW Sbjct: 109 ERLAVRPTSETMFCDHWSRVLHSYRELPMKYNQWCSVVRWE-----KTTRPFLRSREFWW 163 Query: 284 CELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 E T E +++ A+ + L + + A TY +E + Sbjct: 164 QEGHTIHETAAEAEAETQQQLNCYADVCEQDLAIPVVKGRKTDKEKFAGAEATYTIEA-M 222 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 + + G+ S+ + + +++ T GV+ R + AI+ + Sbjct: 223 MKDGKALQSGTSHYFGDKFSKAYDVTFTGRDNQLHHPFQT--SWGVST-RLVGAIIMTHG 279 Query: 402 NADGSVTIPTV 412 + DG + P V Sbjct: 280 DDDGLILPPAV 290 >gi|227485246|ref|ZP_03915562.1| recombination and DNA strand exchange inhibitor protein MutS2 [Anaerococcus lactolyticus ATCC 51172] gi|227236706|gb|EEI86721.1| recombination and DNA strand exchange inhibitor protein MutS2 [Anaerococcus lactolyticus ATCC 51172] Length = 781 Score = 36.7 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 14/121 (11%), Positives = 42/121 (34%), Gaps = 13/121 (10%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA---EG 65 +N + ++ + +++ ++ R + + +R + S +I +A A + Sbjct: 511 KNFNKILEQIEDDKYQMEAKN-KEIEAYRREIQSIKDKLRNK----SKEIDEAKAEIIKK 565 Query: 66 NLSLVDALKNETST-----LKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + ++ + LKE ++ SL K+ + + +E Sbjct: 566 AEERANEILDKANKESQAMLKEAKRSKNANTRDIDRSLNKIRNKFKDSYIEREEDRFGQT 625 Query: 121 E 121 Sbjct: 626 R 626 >gi|114777552|ref|ZP_01452533.1| hypothetical protein SPV1_07591 [Mariprofundus ferrooxydans PV-1] gi|114552023|gb|EAU54540.1| hypothetical protein SPV1_07591 [Mariprofundus ferrooxydans PV-1] Length = 812 Score = 36.7 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN-SNSAQIGQAIAEGNLSLVDAL 73 L +R + + ++ LD + IL +++++R R N S +I N L++ Sbjct: 377 KRTLLRRGVTDKFPEVVKLDREIDILKGQVKELRKRVNSSLEQKIAFLKQRMNQELLETK 436 Query: 74 KNETSTLKEQL 84 + + + E L Sbjct: 437 REQKAGNAEAL 447 >gi|55378937|ref|YP_136787.1| hypothetical protein rrnAC2250 [Haloarcula marismortui ATCC 43049] gi|55231662|gb|AAV47081.1| unknown [Haloarcula marismortui ATCC 43049] Length = 653 Score = 36.7 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 37/91 (40%), Gaps = 9/91 (9%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 + ILSL + L +I+ + + + SA+I ++ L N L++ Sbjct: 437 ESEDFDEILSLHREANQLEFEIDSLESDLDDVSAEI---------EEIEELVNRADDLRD 487 Query: 83 QLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 + L +E + + + ++ + + E + Sbjct: 488 ERDALVEELTDKRTKIDQIEANAVDEFNEHM 518 >gi|332216000|ref|XP_003257129.1| PREDICTED: TRAF-interacting protein [Nomascus leucogenys] Length = 469 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 50/141 (35%), Gaps = 31/141 (21%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNS----N 54 LD ++++ +++ L ++ D++ R I+ +R RN+ Sbjct: 74 LDAEFLKNELDNIRAQLSQK------------DKEKRDSQVIIDTLRDTLEERNATVVSL 121 Query: 55 SAQIGQA-------IAEGN-----LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 +G+A + + E L+ ++ +E+ E + S ++ Sbjct: 122 QQALGKAEMLCSTLKKQMKYLEQQQDETKQAQEEARRLRSKMKTMERIELLLQSQRPEVE 181 Query: 103 SCIPNVPLEEVPIGTSANENI 123 I ++ + + + A + Sbjct: 182 EMIRDMGVGQSAVEQLAVYCV 202 >gi|293364020|ref|ZP_06610756.1| chromosome segregation protein SMC [Mycoplasma alligatoris A21JP2] gi|292552510|gb|EFF41284.1| chromosome segregation protein SMC [Mycoplasma alligatoris A21JP2] Length = 981 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 15/97 (15%) Query: 7 IRQNPEHLDIALKK----RHLEPQS-EYILSLDE-KNRILIKKIEDIRARRNSNSAQIGQ 60 +R+ + LKK + +E + + L E + R L +++E + +N + +I + Sbjct: 206 LRKQADKAKEYLKKTEQLKDIEIAVLAHDIELYEGQYRQLTRELEGVEETKNDYTEKIEK 265 Query: 61 ---------AIAEGNLSLVDALKNETSTLKEQLPILE 88 +G + AL ++ + E+L LE Sbjct: 266 VESKLNKSILQRDGLQKEISALMGKSKGINERLKDLE 302 >gi|229012221|ref|ZP_04169399.1| 3D domain protein [Bacillus mycoides DSM 2048] gi|228749064|gb|EEL98911.1| 3D domain protein [Bacillus mycoides DSM 2048] Length = 517 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 34/88 (38%), Gaps = 11/88 (12%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 Q E + E +++ I E+ + ++IE ++ + +I +A E Sbjct: 273 QEIEKVKE-------EAKAQEIAKAKEEAKA--QEIEKVKEEAKA--QEIAKAKEEAKAQ 321 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCS 96 ++ +K E +++ ++E Sbjct: 322 EIEKVKEEAKAQAQEIAKAKEEAKVREM 349 >gi|225682548|gb|EEH20832.1| DNA repair protein rad50 [Paracoccidioides brasiliensis Pb03] Length = 1292 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 7/79 (8%) Query: 3 DIQWIRQ--NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +I+ +R+ N E + ++H + + ++++ L ++IE +RA + S ++ + Sbjct: 191 NIKALRKKQNEELAKYKIMEQHAKENKDKADRAEKRSIKLQEEIEALRAESHELSKEMRR 250 Query: 61 AIAEGNLSLVDALKNETST 79 A L D E+ + Sbjct: 251 A-----AELADKAWKESES 264 >gi|120434574|ref|YP_860267.1| hypothetical protein GFO_0205 [Gramella forsetii KT0803] gi|117576724|emb|CAL65193.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803] Length = 756 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 44/160 (27%), Gaps = 6/160 (3%) Query: 55 SAQIGQA------IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 S + Q + N ++ L++E LK+ + K E K + Sbjct: 566 SKTVDQLGYYDLSKLKKNYKKIEKLESEVDELKDNIFYFIKSLDEDSVEASKFYILTLDY 625 Query: 109 PLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLT 168 + V N + + + + FD T+ Sbjct: 626 LQDMVQSIGFITRNSYNHVHNNHKNLKFNQIRDLKKVDDKMQILFDEITETFDNHEFGNI 685 Query: 169 GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYG 208 +L ++ L ++ DL + S + +G Sbjct: 686 NNLLSEKQELMDYVSDLIQKQIERIRTSESSPKNTKLYFG 725 >gi|114657229|ref|XP_001171995.1| PREDICTED: GRINL1A complex locus protein 1 isoform 7 [Pan troglodytes] Length = 550 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|60607|emb|CAA49168.1| A-type inclusion protein [Ectromelia virus] gi|745132|prf||2015432A A type inclusion body protein Length = 1049 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 46/152 (30%), Gaps = 21/152 (13%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN---LSLVDALKNE 76 +R+ + ++ K++E +R R Q+ + GN +D LKN Sbjct: 683 RRNNDHNAD-----------TKKEMERLRNRIMDLDKQLNECRRNGNGSSSEEIDRLKNR 731 Query: 77 TSTLKEQLPILEKEEHEVCSS--LKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSA 134 LK+QL E KK I + + ++ + Sbjct: 732 IKDLKQQLEYCESHNGTNEDIIKYKKEIESLKRDLADCRRHNNGSHGYCTYFDEEARSEV 791 Query: 135 IHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 L E ++ E D RA + Sbjct: 792 KCLRLESTQLHE-----DLRRARESDKNDSYY 818 >gi|321465459|gb|EFX76460.1| hypothetical protein DAPPUDRAFT_306188 [Daphnia pulex] Length = 1999 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNET 77 R LE I L+ R L +++D+ + + + + S + K + Sbjct: 1505 NRELEEALAKIDELERIRRQLQGELDDLANTQGTADKNVHELERAKRALESQLAEQKTQI 1564 Query: 78 STLKEQLPILEKEEHEVCSSLKK 100 L+++L + E + + +++ Sbjct: 1565 EELEDELQLTEDAKLRLEVNMQA 1587 >gi|300857280|ref|YP_003782264.1| glycyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] gi|300437395|gb|ADK17162.1| glycyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] Length = 463 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 32/261 (12%), Positives = 69/261 (26%), Gaps = 15/261 (5%) Query: 104 CIPNVPLEEVP-IGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGA 162 E +G + + S + E D+ + Sbjct: 51 WWQKFVHESEHNVGIDCAILMNNEVWVASGHVGNFSDPLMDCKECKARFRADKLVEEHMT 110 Query: 163 RFSVLTGHL-AHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC 221 V L +++ D + + + + + M+ T Q Sbjct: 111 AQGVEKASADGWSNEKLEKYIDDNNIVCPSCGKKNFTDIRQFNLMFKTFQGVTED----S 166 Query: 222 TTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQF 281 ++ T++ N + + K +P + SFR+E R +F Sbjct: 167 KSEIYLRPETAQGIFVNFKNVQRTSRKKIPFGIAQIGKSFRNEI----TPGNFTFRTREF 222 Query: 282 WKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGD---LGFSACKTYDLE 338 + EL + H+ L L + + D L + T D+E Sbjct: 223 EQMELEFFCKPGTDLEWHDYWKKYCWNFLLSLGIKEENIRFRDHDKEELSHYSNATSDIE 282 Query: 339 VWLAGQNLYREISSCSTCGNF 359 + E+ + ++ Sbjct: 283 YLFPF--GWGELWGVADRTDY 301 >gi|302504110|ref|XP_003014014.1| hypothetical protein ARB_07734 [Arthroderma benhamiae CBS 112371] gi|291177581|gb|EFE33374.1| hypothetical protein ARB_07734 [Arthroderma benhamiae CBS 112371] Length = 734 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Query: 7 IRQNPEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSA--QIGQAI 62 +R+ L R + Q + + ++ L K ++++R + Q Q Sbjct: 141 LREESNDYQSQLADQQRQYKHQIDELEAI---RSALQKSLDELRNELEEVTGNLQTAQER 197 Query: 63 AEGNLSLVDALKNETSTLKEQ 83 EG S V+AL+ E LK + Sbjct: 198 LEGRESEVEALEAENIRLKAE 218 >gi|171689966|ref|XP_001909922.1| hypothetical protein [Podospora anserina S mat+] gi|170944945|emb|CAP71056.1| unnamed protein product [Podospora anserina S mat+] Length = 2731 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 4/154 (2%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 +R + E L + K E + + ++E+ R K++ N A+ E Sbjct: 2143 LRADQEALRESFIKSFQEEEL-RLREVNEQLRADNDKLQVTLKEENDLLK---AALKEEY 2198 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 LK E LK QL ++ + ++ + + + I +N Sbjct: 2199 EQAKAQLKEEHEQLKAQLKAEQEALKATFKAEQEELRASMKEDNDRLKIELLSNLMEEET 2258 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLS 160 V + +A+ + ++ + L + + K S Sbjct: 2259 RVKEANAALRVEHDNLKTAFLAELKEEEERIKTS 2292 >gi|157426915|ref|NP_001098728.1| kinesin-like protein KIF20B [Bos taurus] gi|296472856|gb|DAA14971.1| M-phase phosphoprotein 1 [Bos taurus] Length = 1788 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 7/192 (3%) Query: 3 DIQWIRQNPEHLDIALK--KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 D+Q ++ L L K+ +E + I + ++ ++L KI ++ ++N S +I Sbjct: 1245 DLQRKEEDYAELKEKLADAKKQIEQVQKEISVMRDEEKLLRIKINELEKKKNQCSQEI-- 1302 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + + LK + + K + I + E S+K+ I + LEE Sbjct: 1303 ---DMKQRTIQQLKEQLNNQKVEEAIQQYERVCKDLSVKEKIIKDMQMTLEEQEQTQVEQ 1359 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180 + +L + + E E + L + K VL L+ L+ L + Sbjct: 1360 DQVLEAKLEETERLATELEEWKEKYKDLEAKHNQSSNKEFEDNTDVLNTKLSKLQDELQE 1419 Query: 181 FMIDLHTSEHGY 192 + Sbjct: 1420 SEQKHEAERKKW 1431 >gi|70166414|ref|NP_001018100.1| GRINL1A combined protein isoform 1 [Homo sapiens] gi|33668516|gb|AAO39707.1| GRINL1A complex protein 1 Gcom1 precursor [Homo sapiens] Length = 550 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|240254065|ref|NP_849648.4| unknown protein [Arabidopsis thaliana] gi|22655198|gb|AAM98189.1| unknown protein [Arabidopsis thaliana] gi|332190690|gb|AEE28811.1| B-cell receptor-associated protein 31-like protein [Arabidopsis thaliana] Length = 221 Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 27/122 (22%) Query: 1 MLD--------IQWIRQNPEHLD------IALKKRHLEPQSEYILSLDEKNRILIKKIED 46 M+D ++ R+N E + +K R + + +L E+ L K+ E Sbjct: 103 MIDRLHHYMRELRIRRKNMEVIKKEGALLEGVKARG----LDEVKNLMEEITSLRKRQEQ 158 Query: 47 IRARRNSNSAQIGQAI---------AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSS 97 + + + S +I +EG L + L E L++QL ++ + S Sbjct: 159 LDSELEARSKEIRTEKTSAVALQKQSEGFLIEFNRLLEENQVLRDQLHTVDSKLSRSSSK 218 Query: 98 LK 99 Sbjct: 219 KN 220 >gi|327261827|ref|XP_003215729.1| PREDICTED: filamin-A-interacting protein 1-like [Anolis carolinensis] Length = 1170 Score = 36.7 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 15/94 (15%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVDAL 73 I L+E N+ L K E+++ R+ + ++ EG + Sbjct: 334 RIEELEETNKSLQKTEEELKELRDKIAKGECGNSSLMAEVENLRKRVLEMEGKDEEITKT 393 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 +++ LK++L E E+ ++KL + + Sbjct: 394 ESQCKELKKKLQEEEHHSKELKLEVEKLQKRMSD 427 >gi|307177759|gb|EFN66756.1| Structural maintenance of chromosomes protein 3 [Camponotus floridanus] Length = 1202 Score = 36.7 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 39/110 (35%), Gaps = 4/110 (3%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI--AEGNLSL 69 E + A K+ L+ + + S E+ L + + + +N + I + +G+ Sbjct: 265 EMVRAATKR--LKEAKKEVQSSKEERDTLSAEQQQLLKEKNKLAFTIHDLLEEVKGDNDS 322 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E LK + + EKE +++ ++ E Sbjct: 323 KKRAQQELEKLKANIALREKELNDLKPKYDEMKRIEEKCLQELQLKEQKR 372 >gi|301618995|ref|XP_002938889.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase MRCK alpha-like [Xenopus (Silurana) tropicalis] Length = 1721 Score = 36.7 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 15/143 (10%), Positives = 36/143 (25%), Gaps = 12/143 (8%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 LD+ R + E+ A + + L E L +L L Sbjct: 741 KLDKTRRESQSEREEFEAE-----------MKQKFDRERLLLMEENKKLSSELDKLSAMF 789 Query: 92 HEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 ++ + + L + ++ ++ + + I + + Sbjct: 790 EKLSVNNRHLEEEMRDLADKKESVAHWEAQITEIIQWVSD-EKDARGYLQALASKMTEEL 848 Query: 152 DFDRATKLSGARFSVLTGHLAHL 174 D R + L + Sbjct: 849 DTLRNSSLGAKPTDMPWKMRRFA 871 >gi|170046033|ref|XP_001850590.1| myosin motor [Culex quinquefasciatus] gi|167868952|gb|EDS32335.1| myosin motor [Culex quinquefasciatus] Length = 640 Score = 36.7 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 42/100 (42%), Gaps = 4/100 (4%) Query: 5 QWIRQNPEHLDI--ALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 + + + + + AL+ R + +L++++ +L ++E +R S + Q Sbjct: 475 KLLEELKKSVKETKALEIRLQSAHASQNAALEKEHNLLKVEMEQVREEIKKESKKYDQIK 534 Query: 63 AE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + + V+ ++ ET+ + + +E+ + K Sbjct: 535 EQLVASQKEVEDVRAETAKIIARTKDRAQEDRAAAQAQKN 574 >gi|156541882|ref|XP_001600602.1| PREDICTED: similar to LOC779580 protein [Nasonia vitripennis] Length = 899 Score = 36.7 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%) Query: 13 HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 +++ LK+ + + + + K R EDIRA RNS + + Sbjct: 483 AVEVKLKRLEISDYQKRLADAEAKLRQQQTVFEDIRAERNSYKKSLSLC-----QDEIAE 537 Query: 73 LKNETSTLKEQLPILEKE 90 LKN+T L Q+ L+++ Sbjct: 538 LKNKTKELSSQIDQLKEQ 555 >gi|195124636|ref|XP_002006797.1| GI21263 [Drosophila mojavensis] gi|193911865|gb|EDW10732.1| GI21263 [Drosophila mojavensis] Length = 1213 Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 19/94 (20%) Query: 1 ML-DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI- 58 ML D I + + A K+ + + + + K +IE ++A + + + +I Sbjct: 1 MLQDELDIYDDLDQFQEAETKKC-----KELEAWEAKYDAAKLEIESLQAEKKALAKKIR 55 Query: 59 ------------GQAIAEGNLSLVDALKNETSTL 80 +A + + + L+ E + Sbjct: 56 TMEVNFQNLLDTAKAEIKRKDAQIIQLRKEKDDI 89 >gi|311031913|ref|ZP_07710003.1| hypothetical protein Bm3-1_15502 [Bacillus sp. m3-13] Length = 447 Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 27/71 (38%), Gaps = 2/71 (2%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCS 96 L + ++IRA + + + G +D + + LK+++ +L++ + Sbjct: 60 QLQAEQQEIRAEVERLDKAVAETKNKISGKKEEIDTTRKDIEKLKKEIEVLKERIAKRNE 119 Query: 97 SLKKLISCIPN 107 L+ Sbjct: 120 LLEDRARSFQQ 130 >gi|299748327|ref|XP_001837611.2| hypothetical protein CC1G_08165 [Coprinopsis cinerea okayama7#130] gi|298407922|gb|EAU84235.2| hypothetical protein CC1G_08165 [Coprinopsis cinerea okayama7#130] Length = 917 Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 13/92 (14%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNS-----------NSAQIGQAIA--EGNL 67 RH+ + I L ++N L++KIE + + NS +I E Sbjct: 213 RHVSMSTNEISLLADQNAELMQKIEQLESESNSADQAGRRELKRLEKEIASLREALEKTQ 272 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 + L+ +T L + + + ++ + + Sbjct: 273 AKSQELEEKTKGLDKGIDRVVEDAWKKKRERE 304 >gi|297842179|ref|XP_002888971.1| ATHSP101 [Arabidopsis lyrata subsp. lyrata] gi|297334812|gb|EFH65230.1| ATHSP101 [Arabidopsis lyrata subsp. lyrata] Length = 911 Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 2/99 (2%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + + Sbjct: 392 IDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEREKDKASKARLIEVRKELDD 451 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 L D L+ T +++ +++ + + S Sbjct: 452 LRDKLQPLTMKYRKEKERIDEIRRLKQKREELMFSLQEA 490 >gi|288932188|ref|YP_003436248.1| hypothetical protein Ferp_1830 [Ferroglobus placidus DSM 10642] gi|288894436|gb|ADC65973.1| Protein of unknown function DUF460 [Ferroglobus placidus DSM 10642] Length = 618 Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 13/80 (16%) Query: 5 QWIRQNPEHLD---IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 + +R+ E L L+ + SE + R + K +++ I Sbjct: 411 KMLREKIEELKKEVERLQMKLYTISSEQYEKI---RRENVYK--SLQSEIAELRKVI--- 462 Query: 62 IAEGNLSLVDALKNETSTLK 81 + + LK + LK Sbjct: 463 --KRKDEEISKLKEKIEELK 480 >gi|229142529|ref|ZP_04271016.1| hypothetical protein bcere0013_55880 [Bacillus cereus BDRD-ST26] gi|228640924|gb|EEK97268.1| hypothetical protein bcere0013_55880 [Bacillus cereus BDRD-ST26] Length = 421 Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 44/108 (40%), Gaps = 7/108 (6%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 + E++ +K + + E I LDE+ ++L +I+ + +++N+ +IGQ Sbjct: 168 LIAEKENIQREIKSINKQKDKENI--LDEQKQVLDDRIQSLESQQNNIEKRIGQRK---- 221 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 +D+ + + T KE ++ + LE+ Sbjct: 222 -ETLDSERKKVDTTKEGKQKQKEHALNQYKESTIVSVNQRIQSLEQEI 268 >gi|149063535|gb|EDM13858.1| citron, isoform CRA_b [Rattus norvegicus] gi|149063536|gb|EDM13859.1| citron, isoform CRA_b [Rattus norvegicus] gi|149063537|gb|EDM13860.1| citron, isoform CRA_b [Rattus norvegicus] gi|149063538|gb|EDM13861.1| citron, isoform CRA_b [Rattus norvegicus] gi|149063539|gb|EDM13862.1| citron, isoform CRA_b [Rattus norvegicus] Length = 959 Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 89/338 (26%), Gaps = 33/338 (9%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 IL+L + + K E + + N + A+ E N + LK++L LE Sbjct: 97 EILALQQALKEQKLKAESLSDKLNDLEKK--HAMLEMNARSLQQKLETERELKQRL--LE 152 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE-- 146 + + + ++ + + + L +E E Sbjct: 153 EVLYSHEKVKMEGTISQQTKLIDFLQAKMDQPAKKKKVPLQYNELKLALEKEKARCAELE 212 Query: 147 --------ALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 L + A + + T A + A+ + + ++ P Sbjct: 213 EALQKTRIELRSAREEAAHRKATDHPHPSTPATARQQIAMSAIVRSPEHQPSAMSLLAPP 272 Query: 199 LLVRDEAMYGTGQIPKFADDMFCTTDGRW-----LIPTSEVSLTNLYSHEIIESKSLPLR 253 R EA + + M R+ + T + SK L + Sbjct: 273 SSRRKEASTPEEFSRRLKERMHHNIPHRFNVGLNMRATKCAVCLDTVHFGRQASKCLECQ 332 Query: 254 FTTLAPSFRS-------EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 A A T R K + +E S + H Sbjct: 333 VMCHPKCSTCLPATCGLPAEYATHFTEAFCR----DKVSSPGLQSKEPSSSLHLEGWMKV 388 Query: 307 EEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 KR + + L S YD E AGQ Sbjct: 389 PRNNKRGQQGWDRKYIV---LEGSKVLIYDNEAREAGQ 423 >gi|145476773|ref|XP_001424409.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124391473|emb|CAK57011.1| unnamed protein product [Paramecium tetraurelia] Length = 560 Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 24/202 (11%), Positives = 57/202 (28%), Gaps = 2/202 (0%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG--NLSLVDALKNETSTLKEQLP 85 + I +L + IE+++ QI + E L+ + L ++ Sbjct: 351 KEISNLMNQLNENQNFIEELQNHLTEIHKQITKFKQEKLTLKQQNQELQEQVKQLSSEIK 410 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 E + L + + ++ ++ R + K I ++E+ E Sbjct: 411 QQEGLRYSQEYMLPQFNISCQSAMTDQSLCEDRERQSKQGRQLNKSKDTILQNKENQEKR 470 Query: 146 EALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEA 205 + ++ + S S ++++ Q G + S L Sbjct: 471 DLKSTQCINQLKQQSQQNTSYKAQFQQKVKKSNPQNKDMYALDTFGNRDRSISCLDMINK 530 Query: 206 MYGTGQIPKFADDMFCTTDGRW 227 + D +W Sbjct: 531 GIKFRESSDEEDQSPIAQFKQW 552 >gi|40060485|gb|AAR37417.1| heat shock protein HSP101 [Zea mays] Length = 912 Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 35/92 (38%), Gaps = 13/92 (14%) Query: 11 PEHLDIALKK-R-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A R L+ Q E I +L+ K L ++ + ++ S + Sbjct: 394 IDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASK-----------A 442 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ E L+ +L L + + + + Sbjct: 443 RLIEVRKELDDLRVKLQPLTMKYRKEKERIDE 474 >gi|118350094|ref|XP_001008328.1| hypothetical protein TTHERM_00013490 [Tetrahymena thermophila] gi|89290095|gb|EAR88083.1| hypothetical protein TTHERM_00013490 [Tetrahymena thermophila SB210] Length = 1965 Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 6/111 (5%) Query: 6 WIRQNPEHLDIAL-----KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + + + + A K+R + E I +L+E+N+ + K +DI + N Q+ + Sbjct: 505 LLSEQKDKIKQAQYELDSKERENQLLQEDIKNLEEQNQEIQSKFKDIERKLNQQIKQL-K 563 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 AE L E ++++ +K+ ++ L+K I E Sbjct: 564 DKAENQCQENYKLNIELREIRKEQEFEKKQNQDMMLLLEKRQQGITVDMNE 614 >gi|312067369|ref|XP_003136710.1| hypothetical protein LOAG_01122 [Loa loa] gi|307768118|gb|EFO27352.1| hypothetical protein LOAG_01122 [Loa loa] Length = 976 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 43/163 (26%), Gaps = 15/163 (9%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIK----------KIEDIRARRNSNSAQ- 57 +N L+ ++ + I L+ +NR L + K E++ R N + Sbjct: 782 ENLTREKDNLENENVTLK-NTISKLERENRDLKQMEEMYTLQDKKTEELEHRLNLLQKEN 840 Query: 58 --IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +G+A + V LK + L L+ E H P Sbjct: 841 ERLGKA-CDDADEEVSDLKEQIFELLRVNAKLQAEMHGESEDTVNRRMGYIEPPAILPRS 899 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 S + E + R K Sbjct: 900 HLSIQRTTSGMNSPNVKVVDVTESPLEWKAEVEKRKEMQRLAK 942 >gi|302503947|ref|XP_003013933.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371] gi|291177499|gb|EFE33293.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371] Length = 646 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 8/72 (11%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 DI I+++ + + + I SL + R L + ++++ + QA Sbjct: 530 DIDEIKRDMQEIK--------DHYVNLIRSLQGEKRELKQAAKNLKQEEKQARKEEKQAR 581 Query: 63 AEGNLSLVDALK 74 + + + K Sbjct: 582 KQEKAARKEERK 593 >gi|257438845|ref|ZP_05614600.1| proline--tRNA ligase [Faecalibacterium prausnitzii A2-165] gi|257198660|gb|EEU96944.1| proline--tRNA ligase [Faecalibacterium prausnitzii A2-165] Length = 479 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 71/191 (37%), Gaps = 11/191 (5%) Query: 224 DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWK 283 + + PTSE + +S + + LP+++ R E + TR LR +FW Sbjct: 109 ERLAVRPTSETMFCDHWSRVLHSYRELPMKYNQWCSVVRWE-----KTTRPFLRSREFWW 163 Query: 284 CELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL 341 E T E +++ A+ + L + + A TY +E + Sbjct: 164 QEGHTIHETAAEAEAETQQQLNCYADVCEQDLAIPVVKGRKTDKEKFAGAEATYTIEA-M 222 Query: 342 AGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYL 401 + + G+ S+ + + +++ T GV+ R + AI+ + Sbjct: 223 MKDGKALQSGTSHYFGDKFSKAYDVTFTGRDNQLHHPFQT--SWGVST-RLVGAIIMTHG 279 Query: 402 NADGSVTIPTV 412 + DG + P V Sbjct: 280 DDDGLILPPAV 290 >gi|195375797|ref|XP_002046686.1| GJ12344 [Drosophila virilis] gi|194153844|gb|EDW69028.1| GJ12344 [Drosophila virilis] Length = 551 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 22/41 (53%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 L +K + L ++ E + A+R + SA IG A + + ++ Sbjct: 261 QQLADKVQELRQQSETLLAQRKTLSASIGALKARESAAAME 301 >gi|190347741|gb|EDK40075.2| hypothetical protein PGUG_04173 [Meyerozyma guilliermondii ATCC 6260] Length = 1840 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 6/84 (7%) Query: 23 LEPQSEYILSLDEK----NRILIKKIEDIRARRNSNSAQIGQAIAEGNLS--LVDALKNE 76 ++ E IL L+++ K+ E++ +R+ NS Q + + N + ++ L E Sbjct: 1613 VDENDEKILELEKEVHKSKEEFEKQREELEKQRDENSKQKDEIAKQKNEALKQIEKLSQE 1672 Query: 77 TSTLKEQLPILEKEEHEVCSSLKK 100 L+ L +E +KK Sbjct: 1673 NDALRADLGAKTEEHKVYYEDVKK 1696 >gi|182417241|ref|ZP_02948594.1| chromosome segregation protein SMC [Clostridium butyricum 5521] gi|182378887|gb|EDT76400.1| chromosome segregation protein SMC [Clostridium butyricum 5521] Length = 1187 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 7/91 (7%) Query: 7 IRQNPEHLDIALKKRHLE-PQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 I N L+ L KR E + I+ L++ N+I ++E ++A + Sbjct: 335 IENNKLLLEQELAKRFEEQADKKEIIEKLEQTNKIKQLELEKMKAELKVLQKSELDFLRS 394 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 + +KNE + LK +L + E++ + Sbjct: 395 NSD-----VKNEINILKRELELREEKRQSLD 420 >gi|126310419|ref|XP_001373962.1| PREDICTED: similar to L-FILIP [Monodelphis domestica] Length = 1227 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 15/77 (19%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVDAL 73 I L+E N+ L K E+++ R+ + ++ EG + Sbjct: 359 RIEELEETNKNLQKAEEELQELRDKIAKGECGNSSLMVEVENLRKRVLEMEGKDEEITKT 418 Query: 74 KNETSTLKEQLPILEKE 90 +++ LK++L E Sbjct: 419 ESQCRELKKKLQEEEHH 435 >gi|312622589|ref|YP_004024202.1| chromosome segregation protein smc [Caldicellulosiruptor kronotskyensis 2002] gi|312203056|gb|ADQ46383.1| chromosome segregation protein SMC [Caldicellulosiruptor kronotskyensis 2002] Length = 1177 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 48/110 (43%), Gaps = 9/110 (8%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR---ARRNSNSAQIGQ 60 ++++++ E LK + +E IL L+++ L K IE+++ + + + + Sbjct: 304 LKFLKKQLES-KQQLK----DHLAEQILQLEKQKEDLKKNIEELQKSLSEKEEEHRNVLE 358 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 A+ + ALK + + ++ E E E S ++K + + Sbjct: 359 VYAKLQK-QITALKESITKIDSEIQKKEAELIECISQIEKFNQKLNGILH 407 >gi|301616637|ref|XP_002937766.1| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 7, axonemal-like [Xenopus (Silurana) tropicalis] Length = 3961 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 30/82 (36%), Gaps = 1/82 (1%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 KR E E + S + + ++E ++ + S ++ + + ++ K E Sbjct: 2513 KRRYEVGLEKLESASSQVATMQSELEALQPQLKVASKEVDEMMVVIERESIEVAKTE-KV 2571 Query: 80 LKEQLPILEKEEHEVCSSLKKL 101 +K + ++ + + Sbjct: 2572 VKADEAVANEQAMAAKAIKDEC 2593 >gi|291228745|ref|XP_002734340.1| PREDICTED: translocated promoter region (to activated MET oncogene)-like [Saccoglossus kowalevskii] Length = 1263 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 41/99 (41%), Gaps = 10/99 (10%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILS----LDEKNRILIKKIEDIRARRNSNSAQIGQ 60 + +R+ E +D L+ + + + + L E+NR L K++ + +N+ +A + + Sbjct: 561 KLLREEKERVDQQLQ--QMVAKVKQLEENVAPLQEQNRALTSKVDVLVLEKNTLTADVNR 618 Query: 61 AIA----EGNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 + + L E + K+ + L +E Sbjct: 619 WKNKTNTKADPEQYKKLVEENESNKKTISQLTEENQRQK 657 >gi|182624590|ref|ZP_02952372.1| hypothetical protein CJD_0489 [Clostridium perfringens D str. JGS1721] gi|177910194|gb|EDT72582.1| hypothetical protein CJD_0489 [Clostridium perfringens D str. JGS1721] Length = 203 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 8/65 (12%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Query: 31 LSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 L + + + + ++++ ++ N S ++ + L + A K E + + ++ +E Sbjct: 54 LKNNTELKSIQEEVDKLQNENNDLSKEV--EDKQKELDNLRAKKEEQAKIAQEESKKSEE 111 Query: 91 EHEVC 95 + Sbjct: 112 NSKNK 116 >gi|157415143|ref|YP_001482399.1| putative cell division protein [Campylobacter jejuni subsp. jejuni 81116] gi|157386107|gb|ABV52422.1| putative cell division protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747786|gb|ADN91056.1| DNA translocase ftsK [Campylobacter jejuni subsp. jejuni M1] Length = 946 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 16/153 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEY------ILSLDEKNRILIKKIEDIRARRNSNSA 56 DI+ I N + + K++++E I + + + R + K E + + Sbjct: 278 DIKQIDTNKNLDEPSYKRKNIEIPVSKQEVKPKIFTKELELRENLIKKEKLEQEYKAYQN 337 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I L + +K E L+E I + E I E I Sbjct: 338 EI----------LENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESNKIN 387 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + N + P L+ + E Sbjct: 388 ENKNPDKTDNIFEFAPIVEELNHPYIEPTPIKN 420 >gi|145478375|ref|XP_001425210.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124392279|emb|CAK57812.1| unnamed protein product [Paramecium tetraurelia] Length = 1127 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 40/115 (34%), Gaps = 8/115 (6%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN----SAQI 58 DIQ +NP+ + L + + L ++ + L ++I + ++N ++ Sbjct: 733 DIQQKLKNPKQIKKGL----TDDDINTLQQLVKEKQQLSQQITTLMNKKNEIKMKQQKKV 788 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEV 113 + LK +T L QL +K E+ + + E Sbjct: 789 DVNKIQQLEQQQSELKQQTDQLNMQLKGKQKYHQEIIEVQNENKKNLAQALKERD 843 >gi|29351561|gb|AAH49219.1| NFE2L3 protein [Homo sapiens] Length = 429 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L K E ++ + + I Sbjct: 314 IRDIRRRGKNK-VAAQNCRKRKLDI----ILNLEDDVCNLQAKKETLKREQAQCNKAINI 368 Query: 61 AIAE 64 + Sbjct: 369 MKQK 372 >gi|74007508|ref|XP_856047.1| PREDICTED: similar to Moesin (Membrane-organizing extension spike protein) isoform 5 [Canis familiaris] Length = 591 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 11/113 (9%), Positives = 32/113 (28%), Gaps = 2/113 (1%) Query: 31 LSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 L L+++ + + E + R + + + + L E + L ++ LE Sbjct: 387 LELEQERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLE 446 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + + + V + + V + ++ Sbjct: 447 MARQKKENEAVEWQQKAQMVQEDLEKTRAELKTAMSTPHVAEPAENEQDEQDE 499 >gi|307187368|gb|EFN72491.1| hypothetical protein EAG_13414 [Camponotus floridanus] Length = 1870 Score = 36.7 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 9/90 (10%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---------AEGNLSLV 70 ++ LE + L+ + L ++++ N+ +I + + Sbjct: 663 RKQLEDAENRVKLLESQIASLQTDKDEVQDEINALQNKINKLKLDLSAETAAKRDIQEEL 722 Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKK 100 ALKNE L ++ L+ + H + Sbjct: 723 TALKNEMKNLISKIDELKVQNHALKEERNA 752 >gi|281205409|gb|EFA79600.1| protein kinase C substrate 80K-H like protein [Polysphondylium pallidum PN500] Length = 537 Score = 36.7 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Query: 37 NRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEV 94 + +KIE R + + +A S ++ LK E LKE++ E ++ + Sbjct: 143 RKEREEKIERYRQGLKKKAEMVEEAKTLISEKKSELERLKKEVEPLKEKIKEYEVKKELL 202 Query: 95 CSSLKKLISCIPN 107 + + + Sbjct: 203 EKQREDERKRLED 215 >gi|154418524|ref|XP_001582280.1| Inner dynein arm light chain, axonemal-related protein [Trichomonas vaginalis G3] gi|121916514|gb|EAY21294.1| Inner dynein arm light chain, axonemal-related protein [Trichomonas vaginalis G3] Length = 234 Score = 36.7 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 3/82 (3%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 D+ + N ++ +Y L EK R L + +++ + + +I + Sbjct: 142 DLNELALNFGANKNIQVTLGMDQLLDYNKKLREKRRELELEANNLQIQLDGLEKRIQENK 201 Query: 63 AEGNLSLVDA---LKNETSTLK 81 D LK + ++K Sbjct: 202 QIREKEFADEIAFLKKQGQSIK 223 >gi|123472977|ref|XP_001319679.1| hypothetical protein [Trichomonas vaginalis G3] gi|121902468|gb|EAY07456.1| hypothetical protein TVAG_499420 [Trichomonas vaginalis G3] Length = 871 Score = 36.7 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQLP 85 + I+ D+K R E +R+ R S S ++ AE +KN K+ + Sbjct: 482 KEIVEADKKVRQQQTLYEQVRSERESASKKVKDVRAEIEQLDHEFTRMKNAIDQHKDDIR 541 Query: 86 ILEKEEHEVCSSLKK 100 E E+ + SL Sbjct: 542 RKEAEKIKDKKSLND 556 >gi|13786532|ref|NP_112664.1| INT [Lactococcus phage TP901-1] gi|13661675|gb|AAK38018.1|AF304433_1 INT [Lactococcus phage TP901-1] gi|1246426|emb|CAA59475.1| integrase [Lactococcus phage TP901-1] gi|2924232|emb|CAA74610.1| hypothetical protein [Lactococcus phage TP901-1] Length = 485 Score = 36.7 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 LD ++ +D ++K + + +++DE L + + ++A + A+I + Sbjct: 375 LDTSSFKKQISQIDKKIQK-NSDLYLNDFITMDE----LKDRTDSLQAEKKLLKAKISEN 429 Query: 62 IAEGNLSLVDALKNETSTL 80 + + + +K + ++ Sbjct: 430 KFNDSTDVFELVKTQLGSI 448 >gi|328947821|ref|YP_004365158.1| hypothetical protein Tresu_0941 [Treponema succinifaciens DSM 2489] gi|328448145|gb|AEB13861.1| hypothetical protein Tresu_0941 [Treponema succinifaciens DSM 2489] Length = 733 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 62/222 (27%), Gaps = 14/222 (6%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRAR-RNSNSAQIGQAI- 62 +++N E + S DE + L DI ++ RN + +I Sbjct: 486 NILKENIELITED--------DLSLFFSTDEILKSLKFVKNDIDSKVRNIKTVEIESLKN 537 Query: 63 ---AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + ++ LKNE QL E + E S L E T Sbjct: 538 IDVSSELSTAIEKLKNELKISLRQLLKEESDGIENDSFYFPFKFDFNVKLLSEHFFETYT 597 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHL-AHLERAL 178 + + S + E +I + + + K+ + + + Sbjct: 598 FDFLKETLWKVICSHFIKNTEKIKISSIREISNLENENKIFVSPNCFDSLIADKKFQFNG 657 Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF 220 Q D E Y + ++ + + D Sbjct: 658 SQINFDNKKIETIYINENNKYIIPFSEIKKKIFLTDIIDFQN 699 >gi|317137119|ref|XP_001727510.2| intracellular protein transport protein (UsoA) [Aspergillus oryzae RIB40] Length = 1210 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 32/91 (35%), Gaps = 12/91 (13%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSN-------SAQIGQAI-----AEGNLSLVDALKNE 76 + + + +I +++ + + +A A+ + +D L+ E Sbjct: 1083 EVKEKEAARKSTQTEITELQRELEKVKLEAKDQAEEARKAKENESVAQKSTQEIDELRKE 1142 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 LK ++ E+ S L+ L+ + Sbjct: 1143 LEKLKSEVKEKEEARKSAQSELEDLLIVFGD 1173 >gi|315282118|ref|ZP_07870598.1| DNA topoisomerase IV, A subunit [Listeria marthii FSL S4-120] gi|313614235|gb|EFR87899.1| DNA topoisomerase IV, A subunit [Listeria marthii FSL S4-120] Length = 819 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 9/92 (9%) Query: 2 LD--IQWIRQNPEHLDIALKKR-HLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNS 55 LD I+ IR + + D L + + + Q+E I+SL + R+ I ++++ S + Sbjct: 389 LDEVIKLIRGSKDKRDAKLNLQTNYDFSEKQAEAIVSL-QLYRLTNTDIHELQSEAASLA 447 Query: 56 AQIGQAIAE--GNLSLVDALKNETSTLKEQLP 85 QI L+ LK E + +K++ Sbjct: 448 EQISVLEKILGDEAELIAVLKEELAEIKKKYK 479 >gi|291320056|ref|YP_003515314.1| prolyl tRNA synthetase [Mycoplasma agalactiae] gi|290752385|emb|CBH40356.1| Prolyl tRNA synthetase (Proline tRNA ligase) [Mycoplasma agalactiae] Length = 478 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 75/189 (39%), Gaps = 13/189 (6%) Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 ++ PTSEV +L+ I+ K LP+ + A R E + T LR +F E Sbjct: 107 YVRPTSEVLFADLFKKMIVSHKDLPILYNQWANVVRWE-----KTTNPFLRSREFLWQEG 161 Query: 287 VSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + + E E + A+ + L + + + AC TY +E + Sbjct: 162 HTCHKSAIEARKLTREMINVYAKFLKNYLAIPTIIGKKTPYEKFAGACSTYTVEAMMKDG 221 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENYLNA 403 + +S NF S++ +++ ++ +F + + V R L AI+ + + Sbjct: 222 KALQAGTSHYLAQNF-SKKFEISFKNDKNED-EFVYQ---TSWGVSTRLLGAIIMTHGDN 276 Query: 404 DGSVTIPTV 412 G + P V Sbjct: 277 RGIIIPPKV 285 >gi|237668952|ref|ZP_04528936.1| chromosome segregation protein SMC [Clostridium butyricum E4 str. BoNT E BL5262] gi|237657300|gb|EEP54856.1| chromosome segregation protein SMC [Clostridium butyricum E4 str. BoNT E BL5262] Length = 1187 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 7/91 (7%) Query: 7 IRQNPEHLDIALKKRHLE-PQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 I N L+ L KR E + I+ L++ N+I ++E ++A + Sbjct: 335 IENNKLLLEQELAKRFEEQADKKEIIEKLEQTNKIKQLELEKMKAELKVLQKSELDFLRS 394 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 + +KNE + LK +L + E++ + Sbjct: 395 NSD-----VKNEINILKRELELREEKRQSLD 420 >gi|196003640|ref|XP_002111687.1| hypothetical protein TRIADDRAFT_55968 [Trichoplax adhaerens] gi|190585586|gb|EDV25654.1| hypothetical protein TRIADDRAFT_55968 [Trichoplax adhaerens] Length = 7710 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 13/106 (12%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 + L A+K + Q E +D + + L + IE++ AR+ + I + + L Sbjct: 7055 DDLAKAIKD--FDKQLEK--EMDLQKQKLKQDIEELDARK---TKAIEEKKEQAKQEL-- 7105 Query: 72 ALKNETSTLKEQLP----ILEKEEHEVCSSLKKLISCIPNVPLEEV 113 K ++ + KE+L EK+ + + L + + E++ Sbjct: 7106 EAKQKSGSSKEELQRLTDQHEKDLLALQNKLDADRMRMESSLQEKL 7151 >gi|332140517|ref|YP_004426255.1| chromosome segregation ATPases-like protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550539|gb|AEA97257.1| chromosome segregation ATPases-like protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 349 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 10/112 (8%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ-----I 58 I+ +RQ E + AL+K L I+ L + + L +IE + I Sbjct: 85 IEQVRQEFEGFNKALRK-ELSDAKNTIVQLTARQQDLDSQIERQNKEKGETEKSLEDVRI 143 Query: 59 GQAIAEGNLSLV----DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 AE LK + LK++ + + + Sbjct: 144 SLVKAESQRDEAIARTTELKESVAELKQENKDIREHFEHYQQRTAEDRQQER 195 >gi|327440917|dbj|BAK17282.1| glycyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 462 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 9/132 (6%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + K P + SFR+E R +F + EL Sbjct: 175 TAQGIFVNFKNVQRSMRKKTPFGIAQIGKSFRNEI----TPGNFTFRTREFEQMELEFFC 230 Query: 291 REEDSFTEHERMLSCAEEILKRLDL---HYRVVSLCTGDLGFSACKTYDLEVWLAGQNLY 347 + + H + L L + R+ +L + T D+E + Sbjct: 231 KPGEDLEWHSYWKEFCKNWLLALGMKEDSMRLRDHEDDELSHYSNATTDIEFRFPF--GW 288 Query: 348 REISSCSTCGNF 359 E+ + ++ Sbjct: 289 GELWGIADRTDY 300 >gi|259485991|tpe|CBF83478.1| TPA: Calmodulin-binding coil-coil protein Fragment [Source:UniProtKB/TrEMBL;Acc:Q96X03] [Aspergillus nidulans FGSC A4] Length = 1207 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 D++ RQ + ++++H + + + D++ + L E +R R+S S +I + Sbjct: 265 DLEAYRQQFQDFKEKMRRKHTDETIQREME-DQRVKELQ---EQLREARDSRSEEIDKL- 319 Query: 63 AEGNLSLVDALKNE 76 + L +L+ + Sbjct: 320 RDDIEDLEASLREK 333 >gi|119610410|gb|EAW90004.1| hCG1986604, isoform CRA_a [Homo sapiens] Length = 1939 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 7/116 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ R N + + K+R+ + E+ ++E + S S ++ + Sbjct: 1433 MIDVE--RSNAACIALDKKQRNFDKVLAEWKQKYEE---TQAELEASQKESRSLSTELFK 1487 Query: 61 AIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 E +L ++ LK E L++++ L ++ E + +L + E+ Sbjct: 1488 VKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKHIHELEKVKKQLDHEKSE 1543 >gi|114669066|ref|XP_001165099.1| PREDICTED: myosin-4 isoform 1 [Pan troglodytes] Length = 1945 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 7/116 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ R N + + K+R+ + E+ ++E + S S ++ + Sbjct: 1439 MIDVE--RSNAACIALDKKQRNFDKVLAEWKQKYEE---TQAELEASQKESRSLSTELFK 1493 Query: 61 AIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 E +L ++ LK E L++++ L ++ E + +L + E+ Sbjct: 1494 VKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKHIHELEKVKKQLDHEKSE 1549 >gi|110611903|ref|NP_060003.2| myosin-4 [Homo sapiens] gi|224471840|sp|Q9Y623|MYH4_HUMAN RecName: Full=Myosin-4; AltName: Full=Myosin heavy chain 2b; Short=MyHC-2b; AltName: Full=Myosin heavy chain 4; AltName: Full=Myosin heavy chain IIb; Short=MyHC-IIb; AltName: Full=Myosin heavy chain, skeletal muscle, fetal gi|162318880|gb|AAI57121.1| Myosin, heavy chain 4, skeletal muscle [synthetic construct] gi|162319000|gb|AAI56395.1| Myosin, heavy chain 4, skeletal muscle [synthetic construct] Length = 1939 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 7/116 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ R N + + K+R+ + E+ ++E + S S ++ + Sbjct: 1433 MIDVE--RSNAACIALDKKQRNFDKVLAEWKQKYEE---TQAELEASQKESRSLSTELFK 1487 Query: 61 AIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 E +L ++ LK E L++++ L ++ E + +L + E+ Sbjct: 1488 VKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKHIHELEKVKKQLDHEKSE 1543 >gi|4808811|gb|AAD29949.1| myosin heavy chain IIb [Homo sapiens] Length = 1939 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 7/116 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ R N + + K+R+ + E+ ++E + S S ++ + Sbjct: 1433 MIDVE--RSNAACIALDKKQRNFDKVLAEWKQKYEE---TQAELEASQKESRSLSTELFK 1487 Query: 61 AIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 E +L ++ LK E L++++ L ++ E + +L + E+ Sbjct: 1488 VKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKHIHELEKVKKQLDHEKSE 1543 >gi|332250666|ref|XP_003274473.1| PREDICTED: IQ domain-containing protein D-like [Nomascus leucogenys] Length = 349 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 3/64 (4%) Query: 13 HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 L +K R+ E E + LD +R +E++R R + Q E + Sbjct: 232 ELAERMKNRNAE---EELEDLDAVHREEKISLEELRQRHKVLVGEFAQIQEEREIDSKKR 288 Query: 73 LKNE 76 ++ E Sbjct: 289 MEAE 292 >gi|332235766|ref|XP_003267074.1| PREDICTED: GRINL1A complex locus protein 1 isoform 2 [Nomascus leucogenys] Length = 445 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIKHLDDMVHCQQKKVKQM 370 >gi|313213336|emb|CBY37163.1| unnamed protein product [Oikopleura dioica] gi|313247070|emb|CBY35901.1| unnamed protein product [Oikopleura dioica] Length = 890 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 13/152 (8%), Positives = 40/152 (26%), Gaps = 9/152 (5%) Query: 30 ILSLDEKNRI-----LIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD--ALKNETSTLKE 82 + L+ R L +++ + +N +I + E +++KE Sbjct: 725 LNELEISKRQAPDPHLQAEVKTLLVEKNELEKRIDSLTKAKQHYKLQWSRAIKEVASMKE 784 Query: 83 -QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 ++ E + ++++ + + I + + Sbjct: 785 REIESAEVKLRRKQEEMEEMRAKYQAAQDHQEMIAERDTIRAMKSEFKNTQKSFSNVYAQ 844 Query: 142 FEIGEALGLMD-FDRATKLSGARFSVLTGHLA 172 E G + +L + + Sbjct: 845 QYEPEDSGYRKLMEDKEQLLKSGAYTEHDQVI 876 >gi|308062419|gb|ADO04307.1| ATPase [Helicobacter pylori Cuz20] Length = 673 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 11/151 (7%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG-----QA 61 I + E +D +K + + I L+ + + L ++IE+ + + IG Sbjct: 502 ICKELEEIDTDIKNGRFDSDDKNIKKLESECQTLFQEIEEFLKEKGVSDENIGDVGNANY 561 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 ++ LK E + ++ E+ + K I N EE+ SA E Sbjct: 562 RLANIKMNINDLKREIEEIANKIKGFSYED------IDKDIEKFKNQINEELSKINSAFE 615 Query: 122 NILIRSVGKKPSAIHLSREHFEIGEALGLMD 152 I KP I E D Sbjct: 616 EISKNHKEVKPITIEYRLNEDIFEEVFEDFD 646 >gi|255714384|ref|XP_002553474.1| KLTH0D17688p [Lachancea thermotolerans] gi|238934854|emb|CAR23036.1| KLTH0D17688p [Lachancea thermotolerans] Length = 680 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 43/99 (43%), Gaps = 8/99 (8%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 I+ +R + + +L + ++ + +NR +E+++++R Q+ + Sbjct: 187 IKELRDKLKATEKSLDSKKKLLDAKSAANALLENR-----LEEMQSQRKELERQLDSTTS 241 Query: 64 EGNLS--LVDALKNET-STLKEQLPILEKEEHEVCSSLK 99 E + + + LK E S LK+ L E + + ++ Sbjct: 242 ERDRATKDTEELKTEVLSKLKKSLEDAESQSAQSQLQVR 280 >gi|217969965|ref|YP_002355199.1| peptidase M23 [Thauera sp. MZ1T] gi|217507292|gb|ACK54303.1| Peptidase M23 [Thauera sp. MZ1T] Length = 481 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 I+ +R + +R E + + + +L+ + R ++++ ++RR + A++ + Sbjct: 166 IEGLRTDLSETR----RRADEISARRDRLATLESEQRDRQQQLQTEQSRRKAALAEVSRE 221 Query: 62 IAEGNLSLVDALKNETSTLKEQLP 85 + + S VDAL+ + L + + Sbjct: 222 L-QAKKSEVDALQQDEQRLGKLIE 244 >gi|195111562|ref|XP_002000347.1| GI10182 [Drosophila mojavensis] gi|193916941|gb|EDW15808.1| GI10182 [Drosophila mojavensis] Length = 1389 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 34/95 (35%), Gaps = 2/95 (2%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR--NSNSAQIGQAIAEGNLSLVD 71 + +K + L+ ++ +E R I++ + + R S S +I + I + + Sbjct: 463 IRKIIKTKDLDLTTKEAAKEEEDRRKRIEERQKLYNRIFEKSESVEISELILDFDEESKK 522 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 AL L ++L + E + Sbjct: 523 ALLQVDKGLLKKLKPHQVEGVKFMWDACFETLKES 557 >gi|150020312|ref|YP_001305666.1| ATPase [Thermosipho melanesiensis BI429] gi|149792833|gb|ABR30281.1| ATPase AAA-2 domain protein [Thermosipho melanesiensis BI429] Length = 789 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 48/180 (26%), Gaps = 30/180 (16%) Query: 8 RQNPEHLDIALKKRHLEPQSEY------------ILSLDEKNRILIKKIEDIRARRNSNS 55 R++ E D AL +R E + EK+ + E I A +S Sbjct: 314 RKHIEK-DKALARRFQPVFVEEPSVEETIRILKGLKETYEKHHNVKITDEAIEAAAKLSS 372 Query: 56 AQI-----------------GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 I + + + + LK + +L E++ L ++ Sbjct: 373 KYIQDRFMPDKAIDLIDEAAAKVSLKSSDPKISELKEKIKSLSEKIDELTINSKYKEAAE 432 Query: 99 KKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 K EE+ + S + E L+ F+ Sbjct: 433 MKQQMFKLQKQYEELEKKYGTDTVSAETVAKVVESWTGIPATKMMESEKEKLLKFEELVH 492 >gi|148230517|ref|NP_001090034.1| moesin [Xenopus laevis] gi|66912039|gb|AAH97648.1| MGC114910 protein [Xenopus laevis] Length = 580 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 33/115 (28%), Gaps = 3/115 (2%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNETSTLKEQLPI 86 L L+E+ R + E + R + + + + L E S L + Sbjct: 371 KALELEEERRRAKDEAEKLARERLAAEEAKEALLKQSQDQMKNQEQLAAELSELTATIGQ 430 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 LE + + NV + + + ++ +P + Sbjct: 431 LEFARQKKEEEANEWQMKAHNVQAD-LEKTQEELKLVMTTPHVSEPVHGENEHDD 484 >gi|34596293|gb|AAQ76826.1| GRINL1A complex protein Gcom3 precursor [Homo sapiens] Length = 414 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|34596295|gb|AAQ76827.1| GRINL1A complex protein Gcom4 precursor [Homo sapiens] Length = 407 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|34596291|gb|AAQ76825.1| GRINL1A combined protein Gcom10 precursor [Homo sapiens] Length = 390 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|254520551|ref|ZP_05132607.1| NLP/P60 protein [Clostridium sp. 7_2_43FAA] gi|226914300|gb|EEH99501.1| NLP/P60 protein [Clostridium sp. 7_2_43FAA] Length = 423 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 7/67 (10%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE------GNLSLVDA 72 R + + + L +K L +K+ + +RN + I + + + G +A Sbjct: 153 ATRLVNIDKKIVKDLVDKKEKLDEKVTSLEEKRNEIAK-INEEVKKDLDEFTGKKQEQEA 211 Query: 73 LKNETST 79 L E Sbjct: 212 LIAEIEA 218 >gi|114657231|ref|XP_001171871.1| PREDICTED: GRINL1A complex locus protein 1 isoform 1 [Pan troglodytes] Length = 445 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|124088209|ref|XP_001347006.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|50057395|emb|CAH03379.1| hypothetical protein with coiled-coil domains [Paramecium tetraurelia] Length = 1335 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 35/114 (30%), Gaps = 3/114 (2%) Query: 9 QNPEHLDIA--LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG- 65 N + K + + I S+ EKN+ L + A +I Q ++ Sbjct: 1089 TNFKEFKEKYDQMKVQEKQIQDEIKSIQEKNKQLKQDNTRKDANIKELRDKIDQLQSQKP 1148 Query: 66 NLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 N + L + LK+++ ++ ++ + + Sbjct: 1149 NDTEKSDLIQQVKKLKDEINRKDQAIKHFRQKFEEKSNEFEIYKNDYASKYAQT 1202 >gi|70166430|ref|NP_001018101.1| GRINL1A combined protein isoform 2 [Homo sapiens] gi|32265052|gb|AAP41549.1| GRINL1A complex protein 2 precursor [Homo sapiens] Length = 445 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|6648536|gb|AAF21215.1|U29763_1 moesin [Xenopus laevis] Length = 580 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 33/115 (28%), Gaps = 3/115 (2%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL--SLVDALKNETSTLKEQLPI 86 L L+E+ R + E + R + + + + L E S L + Sbjct: 371 KALELEEERRRAKDEAEKLARERLAAEEAKEALLKQSQDQMKNQEQLAAELSELTATIGQ 430 Query: 87 LEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 LE + + NV + + + ++ +P + Sbjct: 431 LEFARQKKEEEANEWQMKAHNVQAD-LEKTQEELKLVMTTPHVSEPVHGENEHDD 484 >gi|268580919|ref|XP_002645442.1| C. briggsae CBR-TAG-241 protein [Caenorhabditis briggsae] Length = 1575 Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 10/124 (8%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIK----KIEDIRARRNSNSAQIGQ 60 + +R E L ++ +E + + + K + L + E + RN S Sbjct: 784 KKLRAEAELLRKDMQD--METDKKTVKEFEIKYKKLESIFEAEREKMNGERNR-SKNELA 840 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 A+ + + + LK T K+ + E+ ++ K + +P E +S + Sbjct: 841 AMKKMKDDVEEHLKKLTEDQKKSEVSWKNEKSKLE---KDIALLKKQLPDEHEMKESSIS 897 Query: 121 ENIL 124 +N Sbjct: 898 QNSF 901 >gi|255086103|ref|XP_002509018.1| predicted protein [Micromonas sp. RCC299] gi|226524296|gb|ACO70276.1| predicted protein [Micromonas sp. RCC299] Length = 590 Score = 36.7 bits (83), Expect = 7.4, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 12/78 (15%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRA--RRNSNSAQIGQA 61 ++ +RQ + L +L ++E+ R + + +RA S + Sbjct: 408 LKRLRQELDERTKNL------VDKRALLQIEEQRRKA--EADKMRAITELEQRSKEF--L 457 Query: 62 IAEGNLSLVDALKNETST 79 + S ++ NE + Sbjct: 458 KEKKERSELEQRINEMQS 475 >gi|210616985|ref|ZP_03291320.1| hypothetical protein CLONEX_03542 [Clostridium nexile DSM 1787] gi|210149508|gb|EEA80517.1| hypothetical protein CLONEX_03542 [Clostridium nexile DSM 1787] Length = 480 Score = 36.7 bits (83), Expect = 7.4, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 72/196 (36%), Gaps = 15/196 (7%) Query: 219 MFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ 278 M + + PTSE +L+S + + LP + R E + TR LR Sbjct: 103 MERLQERLCIRPTSETLFCDLWSKMVRSHRDLPKVWNQWNSVLRWE-----KTTRPFLRS 157 Query: 279 HQFWKCELV--SITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYD 336 +F E T EE + + I L + + + A TY Sbjct: 158 REFLWQEGHTIHATYEEAEQRTLTMLKVYQDFIRDSLAIPFVSGRKAENEKFAGAQDTYT 217 Query: 337 LEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS--GVAVGRCLI 394 +E + + +S GN N +Y D N++ H++ + G++ R + Sbjct: 218 VEALMHDGKALQSATS-HFFGNGFPDAFNIKYIDKNNQ----PHSVYETSWGLST-RIIG 271 Query: 395 AILENYLNADGSVTIP 410 AI+ + + DG V P Sbjct: 272 AIIMVHGDDDGLVLPP 287 >gi|29565757|ref|NP_817330.1| minor tail protein [Staphylococcus aureus phage P68] gi|29378380|gb|AAO83888.1| minor tail protein [Staphylococcus phage P68] Length = 481 Score = 36.7 bits (83), Expect = 7.4, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 18/90 (20%) Query: 3 DIQWIR-----QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRAR------R 51 DI I+ +N E L L + + I R + ++IE + A+ Sbjct: 154 DINLIKSNTGVENIEALKRELAEVKKSVNLDKI-------REIEQQIESLNAKPTNEKTI 206 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 I Q + ++AL+ + +K Sbjct: 207 QEMQQDINQLKQNTSAGKLEALEQSINDIK 236 >gi|327276064|ref|XP_003222791.1| PREDICTED: huntingtin-interacting protein 1-related protein-like [Anolis carolinensis] Length = 1063 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 8/77 (10%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYIL-SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG 65 IR + + LKK + + + L++ + I ++A+ NS A++ + + Sbjct: 346 IRDDRDLQIENLKK-----EIDLLRGELEKIKLEAQRYITQLKAQINSLEAEVEEQRKQK 400 Query: 66 NLSLV--DALKNETSTL 80 +LV + L++E L Sbjct: 401 QKALVDNEQLRDELERL 417 >gi|327399240|ref|YP_004340109.1| ATP-dependent chaperone ClpB [Hippea maritima DSM 10411] gi|327181869|gb|AEA34050.1| ATP-dependent chaperone ClpB [Hippea maritima DSM 10411] Length = 868 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 21/107 (19%) Query: 3 DIQWIRQNPEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSN------ 54 DI+ I++ + + + +R+ + + +L + L K+IE+ + NS Sbjct: 473 DIRTIKEKLDKIKTQIEIAERNGDFEKASVLK-YGELPKLQKEIEEKQKELNSIENRLLK 531 Query: 55 ------------SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 S G +++ S + L LKE++ + Sbjct: 532 EEVTEEEVAAIVSRWTGIPVSKMLESEKEKLLKMEDKLKERVVGQDH 578 >gi|313233553|emb|CBY09725.1| unnamed protein product [Oikopleura dioica] Length = 890 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 13/152 (8%), Positives = 40/152 (26%), Gaps = 9/152 (5%) Query: 30 ILSLDEKNRI-----LIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD--ALKNETSTLKE 82 + L+ R L +++ + +N +I + E +++KE Sbjct: 725 LNELEISKRQAPDPHLQAEVKTLLVEKNELEKRIDSLTKAKQHYKLQWSRAIKEVASMKE 784 Query: 83 -QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 ++ E + ++++ + + I + + Sbjct: 785 REIESAEVKLRRKQEEMEEMRAKYQAAQDHQEMIAERDTIRAMKSEFKNTQKSFSNVYAQ 844 Query: 142 FEIGEALGLMD-FDRATKLSGARFSVLTGHLA 172 E G + +L + + Sbjct: 845 QYEPEDSGYRKLMEDKEQLLKSGAYTEHDQVI 876 >gi|167754401|ref|ZP_02426528.1| hypothetical protein ALIPUT_02695 [Alistipes putredinis DSM 17216] gi|167659026|gb|EDS03156.1| hypothetical protein ALIPUT_02695 [Alistipes putredinis DSM 17216] Length = 661 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 37/84 (44%), Gaps = 3/84 (3%) Query: 5 QWIRQNPEHLDIAL-KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 + ++ E + + ++R P++E +L+E+ R + + + + N S A Sbjct: 208 RRLKTEIEAIPERIDERRRDVPEAEDWAALEEELRQKQEALAKVEEQINDASKAYAAANE 267 Query: 64 EGNLS--LVDALKNETSTLKEQLP 85 E + + LKNE L+ ++ Sbjct: 268 ERLATVRKISDLKNERLALELKIK 291 >gi|270002304|gb|EEZ98751.1| hypothetical protein TcasGA2_TC001312 [Tribolium castaneum] Length = 884 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 12/92 (13%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 N + + LK +++ L+E + +K+ ED R + S Q+ + A S Sbjct: 37 NKDVIIKMLK--------QHVKKLEESYKQNLKETEDFRYKFCLASEQVKKLRA----SP 84 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 + + E LK L +++ E + Sbjct: 85 IKQKEKELKELKGDLSKWKEQCDEYVLCKDRC 116 >gi|118378250|ref|XP_001022301.1| Guanylate-binding protein, N-terminal domain containing protein [Tetrahymena thermophila] gi|89304068|gb|EAS02056.1| Guanylate-binding protein, N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 866 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 14/113 (12%), Positives = 42/113 (37%), Gaps = 9/113 (7%) Query: 5 QWIRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIED-------IRARRNSNS 55 + +++ + L + L++ + I ++ N+ L +I++ +R R S Sbjct: 489 KLFQEDIQKLKVKLQQSNESQDLIRSQIALFEKTNKDLQTEIDEHKNIADQLRRERKLYS 548 Query: 56 AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 A+ G + G + ++ + ++L + + + + N Sbjct: 549 AESGGQVDFGKTEEFEMHIDKLNQRIDKLKQVNLVNLDKSNCQICHFNQQENQ 601 >gi|74007500|ref|XP_848336.1| PREDICTED: similar to Moesin (Membrane-organizing extension spike protein) isoform 2 [Canis familiaris] Length = 577 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 11/113 (9%), Positives = 32/113 (28%), Gaps = 2/113 (1%) Query: 31 LSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 L L+++ + + E + R + + + + L E + L ++ LE Sbjct: 373 LELEQERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLE 432 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + + + V + + V + ++ Sbjct: 433 MARQKKENEAVEWQQKAQMVQEDLEKTRAELKTAMSTPHVAEPAENEQDEQDE 485 >gi|74007506|ref|XP_549044.2| PREDICTED: similar to Moesin (Membrane-organizing extension spike protein) isoform 1 [Canis familiaris] Length = 585 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 11/113 (9%), Positives = 32/113 (28%), Gaps = 2/113 (1%) Query: 31 LSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 L L+++ + + E + R + + + + L E + L ++ LE Sbjct: 381 LELEQERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLE 440 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + + + V + + V + ++ Sbjct: 441 MARQKKENEAVEWQQKAQMVQEDLEKTRAELKTAMSTPHVAEPAENEQDEQDE 493 >gi|327285266|ref|XP_003227355.1| PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 1, axonemal-like [Anolis carolinensis] Length = 4223 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 67/222 (30%), Gaps = 10/222 (4%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 N + + L K+ + LD + L ++EDI + S +I + ++ Sbjct: 768 NVDVVKQNLSKKCKALATSM---LDILAKNLHSQVEDICEAFKAISRKIYE--KPNSIEE 822 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE--EVPIGTSANENILIRS 127 + L+ + E+ E+ +V + + + N+ + S L Sbjct: 823 LAELREWMKGIPEKQKAQEELIIKVMEDYEVMEEFLYNLTQDDFNDKWAASGWPFKLTSQ 882 Query: 128 VGKKPSAIHLSREHFEIGEALGLMDF-DRATKLSGARFSVLTGHLAHLERALGQFMIDLH 186 + + + F + + +F +R L A + + + Sbjct: 883 IEQIRQQHIEDEDRFRKIQLMDQTNFLERLDGLQLAVAGFSAHSDINRAHEIANEARRIR 942 Query: 187 TSEHGYTEVSAPLLVRDEAMYGT-GQIPKFADDMFCTTDGRW 227 +++ E ++GT + M + Sbjct: 943 KQLKDSQQMALLY-NNRERIFGTPVTNYDKLNKMVKDFQPFY 983 >gi|312143707|ref|YP_003995153.1| chromosome segregation protein SMC [Halanaerobium sp. 'sapolanicus'] gi|311904358|gb|ADQ14799.1| chromosome segregation protein SMC [Halanaerobium sp. 'sapolanicus'] Length = 1206 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 18/98 (18%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDAL------- 73 R+L +S I L EK L + E + A + +I + N ++ L Sbjct: 676 RNLIGRSRKIEELTEKKAELKSRGEKLVAELKTLQKEI-KEKETQNKEQIEELQALKMAE 734 Query: 74 ----------KNETSTLKEQLPILEKEEHEVCSSLKKL 101 K E S LKE LE +++ + + Sbjct: 735 NNKQNQIQRFKEELSELKETKNSLEANYNQLEEKISEN 772 >gi|297740164|emb|CBI30346.3| unnamed protein product [Vitis vinifera] Length = 583 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 10/124 (8%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI--AEGN 66 ++ + ++ KR +S + EK R +++ + +R R ++I +A E Sbjct: 360 EDKDEVEE--IKR----ESAKVREEAEKEREILQLADVLREER--AQSKISEAKYQFEEK 411 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 ++V+ LKNE EK + K E N + + Sbjct: 412 NAVVEKLKNELEVFMRSKKAKEKGRGSLKHDNFKDALDCEEDSAESDLHSIELNMDNNNK 471 Query: 127 SVGK 130 S Sbjct: 472 SYKW 475 >gi|295666482|ref|XP_002793791.1| myosin-11 [Paracoccidioides brasiliensis Pb01] gi|226277444|gb|EEH33010.1| myosin-11 [Paracoccidioides brasiliensis Pb01] Length = 2291 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 20/113 (17%) Query: 3 DIQWI---RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ-- 57 D++ + R++ E +L RH + Q ++ R L + + + + + + + Sbjct: 1046 DVKKLESERKSLEAEKTSLASRHNDMQ--------QRLRDLQAQTDAMMSEKKNLEREAA 1097 Query: 58 -IGQAIAEGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + + + +A L + LK QL ++ + S + Sbjct: 1098 DVKKLLEAKMSEDAEAGQSRKMLDQQVKDLKAQLYQVQADLSRERQSRDDVQM 1150 >gi|255552969|ref|XP_002517527.1| ATP-dependent transporter, putative [Ricinus communis] gi|223543159|gb|EEF44691.1| ATP-dependent transporter, putative [Ricinus communis] Length = 727 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 10/89 (11%), Positives = 29/89 (32%), Gaps = 9/89 (10%) Query: 2 LDIQW--IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNS------ 53 D++ R N + + ++R E + D++ + + + + Sbjct: 395 HDLKLHIYRGNFDDFESGYEQRRKEMN-KKFEIYDKQVKAAKRSGNRAQQEKVKDRAKFA 453 Query: 54 NSAQIGQAIAEGNLSLVDALKNETSTLKE 82 + + + A+G + L K+ Sbjct: 454 AAKEASKNKAKGKADEDEPLPEAPKKWKD 482 >gi|114669064|ref|XP_523785.2| PREDICTED: myosin-4 isoform 2 [Pan troglodytes] Length = 1939 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 7/116 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ R N + + K+R+ + E+ ++E + S S ++ + Sbjct: 1433 MIDVE--RSNAACIALDKKQRNFDKVLAEWKQKYEE---TQAELEASQKESRSLSTELFK 1487 Query: 61 AIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 E +L ++ LK E L++++ L ++ E + +L + E+ Sbjct: 1488 VKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKHIHELEKVKKQLDHEKSE 1543 >gi|34596297|gb|AAQ76828.1| GRINL1A complex protein Gcom5 precursor [Homo sapiens] Length = 379 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|326913206|ref|XP_003202931.1| PREDICTED: transcription regulator protein BACH1-like [Meleagris gallopavo] Length = 766 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 6/123 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 DI+ +N +KR L+ I +L+ + L + E++ RN + +G+ Sbjct: 580 HDIRRRSKNR-IAAQRCRKRKLDC----IQNLESEIEKLQNEKENLLKERNLILSTLGET 634 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANE 121 + L + E + EQ+ IL K C P E + E Sbjct: 635 K-QNLTGLCQQVCKEAALSNEQIQILAKYSSSDCPLYFAFPERERTAPSESELTTPTTTE 693 Query: 122 NIL 124 + Sbjct: 694 LVD 696 >gi|326504976|dbj|BAJ99499.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1038 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 + +L+ K L K+ + +R +N S A+ + ++ + E L + E Sbjct: 493 RVATLERKVYALTKERDTLRREQNKKSD--AAALLKEKDEIITQVMAEGEELSRKQAAQE 550 Query: 89 KEEHEVCSSLKKL 101 ++ + +++ Sbjct: 551 ATIRKLRAQIREF 563 >gi|227513690|ref|ZP_03943739.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus buchneri ATCC 11577] gi|227083009|gb|EEI18321.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus buchneri ATCC 11577] Length = 652 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 36/84 (42%), Gaps = 3/84 (3%) Query: 20 KRHLEPQS---EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 K++ E + + L+ + L +++++ +N+ +Q+ Q +L L+ + Sbjct: 567 KKNYEVNKQNQKEVRKLNREVTDLESQLDELSKSKNNIESQMAQPEVFNDLDKASDLQKK 626 Query: 77 TSTLKEQLPILEKEEHEVCSSLKK 100 + +++ E + + L+ Sbjct: 627 LEMIDQKIKETESKWEQKSLQLED 650 >gi|206901654|ref|YP_002250993.1| DNA gyrase, A subunit [Dictyoglomus thermophilum H-6-12] gi|206740757|gb|ACI19815.1| DNA gyrase, A subunit [Dictyoglomus thermophilum H-6-12] Length = 808 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 31/105 (29%), Gaps = 7/105 (6%) Query: 2 LD--IQWIR--QNPEHLDIALKKRHLEPQSEYILSLDEKNRIL-IKKIEDIRARRNSNSA 56 LD I IR +N E L + Q + LD + L + E + N Sbjct: 388 LDEVIAIIRQSENAEKAREKLMLKFKLTQIQAQAILDMRLHQLTRLEKEKLLEEMNQIKE 447 Query: 57 QIGQAIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLK 99 I Q + L + E +K + K E Sbjct: 448 NIAQLEKILKDEKELWRVISEELKEIKRKYADERKTLIEEEEKSD 492 >gi|195381271|ref|XP_002049377.1| GJ21550 [Drosophila virilis] gi|194144174|gb|EDW60570.1| GJ21550 [Drosophila virilis] Length = 694 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 12/102 (11%) Query: 2 LDIQWIRQNPEHLDIALK---KRHLEPQSEYILSLDEKNRILIKK---IEDIRARRNSNS 55 LDI +R+N E L L+ KR+ + L L +KN L+++ I+++R+ Sbjct: 374 LDIADVRKNREDLKKMLESSQKRNNDLA----LELADKNISLVEQTSVIDELRSDLKQMK 429 Query: 56 A--QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 ++ + N + +D L+ +T E++ L+ + ++ Sbjct: 430 KVTKVLNQRLKENDAGIDGLRQTINTQLERIEDLQAQLYQAD 471 >gi|170052071|ref|XP_001862055.1| general vesicular transport factor p115 [Culex quinquefasciatus] gi|167873080|gb|EDS36463.1| general vesicular transport factor p115 [Culex quinquefasciatus] Length = 854 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 5/68 (7%) Query: 33 LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEH 92 L+ +NR L+ ++E +R R N+ + G+A A+ + ++ L+ + L E L E + Sbjct: 765 LEAENRRLLTEVEALRQRVNAA--ERGEAEAK---ADLEKLRRDQEDLLELLTDQESKMG 819 Query: 93 EVCSSLKK 100 LKK Sbjct: 820 SYRQLLKK 827 >gi|86152088|ref|ZP_01070300.1| dna translocase spoiiie [Campylobacter jejuni subsp. jejuni 260.94] gi|85840873|gb|EAQ58123.1| dna translocase spoiiie [Campylobacter jejuni subsp. jejuni 260.94] Length = 946 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 16/153 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEY------ILSLDEKNRILIKKIEDIRARRNSNSA 56 DI+ I N + + K++++E I + + + R + K E + + Sbjct: 278 DIKQIDTNKNLDEPSYKRKNIEIPVSKQEVKPKIFTKELELRENLIKKEKLEQEYKAYQN 337 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I L + +K E L+E I + E I E I Sbjct: 338 EI----------LENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESNKIN 387 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + N + P L+ + E Sbjct: 388 ENKNPDKADNIFEFAPIVEELNHPYIEPTPIKN 420 >gi|319941466|ref|ZP_08015794.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Sutterella wadsworthensis 3_1_45B] gi|319805086|gb|EFW01916.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Sutterella wadsworthensis 3_1_45B] Length = 872 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 10/106 (9%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSA--------QIGQ 60 + +D A + +E S E + LD + L + E ++ + S +I + Sbjct: 391 IDLIDEAAARVKMEIDSKPEALDKLDRRLIQLKIEREAMKKETDDASKKRLAAIEAEIEK 450 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 E K ++ L E+ E + + + Sbjct: 451 LSREYADLEEVWKKEKSEALGEKSVRDEIDRVRRQMDEYRRQAQYE 496 >gi|311268595|ref|XP_003132123.1| PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like [Sus scrofa] Length = 666 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 27/90 (30%), Gaps = 11/90 (12%) Query: 277 RQHQFWKCELVSITREEDS--FTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKT 334 R+ + E + S F + E R +LC LGF A Sbjct: 283 RKWGADRVEDHYCDACQLSNRFPRYNNPEKLLETRCGRCGEWANCFTLCCRALGFEARYV 342 Query: 335 YD------LEVWLAGQNLYREISSCSTCGN 358 +D EV+ Q + C C + Sbjct: 343 WDYTDHVWTEVYSPSQQRWL---HCDPCED 369 >gi|301770597|ref|XP_002920717.1| PREDICTED: GRINL1A complex locus protein 1-like isoform 1 [Ailuropoda melanoleuca] Length = 551 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 22/202 (10%), Positives = 59/202 (29%), Gaps = 3/202 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + S I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETKSFLKAIEEANKKMEAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 E H++ L + + + ++ E + + + Sbjct: 312 ERHQLQLQLLEHETEMSGEIMDSDRERYQRLEEASASLRERIRHLDDMVHCQ-QKKVKQM 370 Query: 150 LMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT 209 + + + K + ++ L + G+ ++ + P + E G Sbjct: 371 VEEIESLKKKVQQKQLLILQLLEKISFLEGENNELQSRLDYLIETQAKPEVETREIGVGC 430 Query: 210 GQIPKFADDMFCTTDGRWLIPT 231 +P+ ++ R + Sbjct: 431 DLLPRLPSQQNDSSSHRQRRGS 452 >gi|291542076|emb|CBL15186.1| prolyl-tRNA synthetase [Ruminococcus bromii L2-63] Length = 479 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 92/286 (32%), Gaps = 22/286 (7%) Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 R+ ++ SG + ++ + Q +D E G+ V P Sbjct: 14 RDEDFAKWYTDIVKKAELVDYSGVKGCMVIRPYGYAIWENIQADLDRRFKETGHENVYMP 73 Query: 199 LLVRDEAMYGTGQIPK---------FADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 + + + + + + + PTSE Y I + Sbjct: 74 MFIPESLLQKEKDHVEGFAPECAWVTVGGQEKLQERLCVRPTSETLFCEHYKKIINTYRD 133 Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCE--LVSITREEDSFTEHERMLSCAE 307 LP + R E + TR LR +F E + T EE + ++ Sbjct: 134 LPKLYNQWCSVVRWE-----KTTRPFLRTSEFLWQEGHTMHETEEEAREETLRMLHVYSD 188 Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367 + L + + + A +TY +E + + + + G+ ++ Sbjct: 189 FYKETLAIPAVIGRKTEKEKFAGAEETYTIE-PMMHNGVALQGGTSHYFGDGFAKSFGIT 247 Query: 368 YRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENYLNADGSVTIPTV 412 Y ++K L + H + V R + A++ + + DG V P + Sbjct: 248 YTGKDNK-LHYPHQ---TSWGVSTRMIGALIMVHSDDDGLVLPPKI 289 >gi|167044410|gb|ABZ09087.1| hypothetical protein ALOHA_HF4000APKG6D3ctg6g4 [uncultured marine crenarchaeote HF4000_APKG6D3] Length = 308 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 58/206 (28%), Gaps = 17/206 (8%) Query: 4 IQWIRQNPEHLDIAL------------KKRHLEPQSEYILSLDEKNRILIKKIEDIRARR 51 I+++ +NPE + A ++R + + + + + + K E I RR Sbjct: 77 IKYLEENPEKIKEARSKHYEENREKINERRRKDYEENHEKINERRRKDYKKNPEKINERR 136 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP--NVP 109 + + + E + + +KE++ +KE E+ S K + Sbjct: 137 RKYRKENPEKVRESKRKDYEKNHEK---IKERVKKWQKENPELRKSHLKKYYEKNPVALT 193 Query: 110 LEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTG 169 E S E KP +H + E + R Sbjct: 194 KEMTKYRRSHRECEWSYCENIKPLHVHHILPKHKYPEYIDGDYHGRMGNNFICFCPFHHF 253 Query: 170 HLAHLERALGQFMIDLHTSEHGYTEV 195 + + + V Sbjct: 254 AYHYTYSTKRNNKKHQNALSFLWFNV 279 >gi|148360426|ref|YP_001251633.1| hypothetical protein LPC_2365 [Legionella pneumophila str. Corby] gi|148282199|gb|ABQ56287.1| hypothetical protein LPC_2365 [Legionella pneumophila str. Corby] Length = 335 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Query: 35 EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 E+ + L+ K ++ +N+ S Q +A ++ LK + S L Sbjct: 226 EQEKELLTKTQEAEKDKNTISEQ--EATILEKDKEIEKLKEKVSEL 269 >gi|126336125|ref|XP_001363891.1| PREDICTED: similar to TATA element modulatory factor 1 [Monodelphis domestica] Length = 1105 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Query: 14 LDIALKKR-HLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 + L R + +E + DE+ + L+++ E + ++ NS I + A+ + + Sbjct: 537 IKEELATRLNCNETTELLKEKDEQIKGLMEEGEKLSKQQLHNSTIIKKLRAKERENEHIS 596 Query: 73 LK--NETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 K + L+E+L L++ K I Sbjct: 597 AKQSKKIKELEEELQHLKQVLDGKEEIEKSHRENIK 632 >gi|50510881|dbj|BAD32426.1| mKIAA1319 protein [Mus musculus] Length = 1240 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 9/64 (14%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIED-------IRARRNSNSAQIGQAIAEGNLSLVDA 72 KR ++ E I LD + +++E+ ++AR S + A Sbjct: 1148 KRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD--AWRKASRSAAESA 1205 Query: 73 LKNE 76 LK E Sbjct: 1206 LKQE 1209 >gi|18138395|ref|NP_542691.1| ORF68 [Helicoverpa zea SNPV] gi|18028777|gb|AAL56213.1|AF334030_138 ORF68 [Helicoverpa zea SNPV] Length = 785 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 26/62 (41%) Query: 38 RILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSS 97 + + D+R + N +I A + + +K E LK++L +E ++ + Sbjct: 381 KNEQTALRDLREQINEQKNEIDTLRANAKIEDYEQIKTERDQLKQRLITIETNYTQLENR 440 Query: 98 LK 99 K Sbjct: 441 CK 442 >gi|25028055|ref|NP_738109.1| excinuclease ABC subunit B [Corynebacterium efficiens YS-314] gi|259505606|ref|ZP_05748508.1| excinuclease ABC, B subunit [Corynebacterium efficiens YS-314] gi|23493339|dbj|BAC18309.1| putative xcinuclease ABC subunit B [Corynebacterium efficiens YS-314] gi|259166799|gb|EEW51353.1| excinuclease ABC, B subunit [Corynebacterium efficiens YS-314] Length = 701 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 25/47 (53%) Query: 43 KIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 +++ ++ + SAQ+ A E L L++E LK++L +++ Sbjct: 651 QVDQLQKLIDDLSAQMAAAARELKFELAGRLRDEVFELKKELKGMKE 697 >gi|118581577|ref|YP_902827.1| alanyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|205830173|sp|A1ATU9|SYA_PELPD RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA ligase; Short=AlaRS gi|118504287|gb|ABL00770.1| alanyl-tRNA synthetase [Pelobacter propionicus DSM 2379] Length = 878 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 11/68 (16%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNS--------AQIGQAI---AEGNLSLVDALKNE 76 E + L + R + ++IE ++ + N+ + ++G AE + V AL++ Sbjct: 734 ERLEKLLARQREMQREIESLQGKLNAAASGDLLSGVEEVGGIKLLAAEVRVEDVKALRDL 793 Query: 77 TSTLKEQL 84 + TLKE++ Sbjct: 794 SDTLKERI 801 >gi|296417529|ref|XP_002838408.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634341|emb|CAZ82599.1| unnamed protein product [Tuber melanosporum] Length = 1326 Score = 36.7 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 3/85 (3%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR--NSNSAQIGQAIAEG 65 R E + L+ + +PQ + L ++ + + + IE++ + N ++ E Sbjct: 338 RDKFETIIQKLQAK-YQPQQAELTDLRKQLKEIRRTIEEMENIKQDNELMVEMATLDREM 396 Query: 66 NLSLVDALKNETSTLKEQLPILEKE 90 +AL+ E ++ + LE E Sbjct: 397 AEEQTEALRAELEAVRGKAEELEME 421 >gi|209401122|ref|YP_002273991.1| hypothetical protein HaSNPVNNg1_gp068 [Helicoverpa armigera NPV NNg1] gi|209364374|dbj|BAG74633.1| hypothetical protein [Helicoverpa armigera NPV NNg1] Length = 785 Score = 36.7 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 26/62 (41%) Query: 38 RILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSS 97 + + D+R + N +I A + + +K E LK++L +E ++ + Sbjct: 381 KNEQTALRDLREQINEQKNEIDTLRANAKIEDYEQIKTERDQLKQRLITIETNYTQLENR 440 Query: 98 LK 99 K Sbjct: 441 CK 442 >gi|149637386|ref|XP_001512436.1| PREDICTED: similar to intersectin long isoform 2 [Ornithorhynchus anatinus] Length = 1711 Score = 36.7 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 41/110 (37%), Gaps = 8/110 (7%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 Q +R + ++ + R + + + ++ R I + ++ ++N + ++ Q E Sbjct: 580 QQLRDQLDEVEK--ETRSKLQEIDIFNNQLKELRE-IHSKQQLQKQKNLEAERLKQKEQE 636 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 ++ K + Q E+E+ + + P P EE Sbjct: 637 KKTVELEKQKEDV-----QRRAHEREKPWPDRAQQDEDYHRPKKPHEEER 681 >gi|68068205|ref|XP_676012.1| chromosome segregation protein [Plasmodium berghei strain ANKA] gi|56495507|emb|CAH95737.1| chromosome segregation protein, putative [Plasmodium berghei] Length = 788 Score = 36.7 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 14/116 (12%) Query: 3 DIQWIRQNPEHLDIALKK-------RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS 55 DIQ I N +++ ++ + ++ + I EK R +K + D + R N Sbjct: 306 DIQIISNNLSNIENRIETSKYGCLSKKIDNAKDEI----EKGREELKTLYDDQKRLNEII 361 Query: 56 AQIGQAIAE---GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 ++ + I + + LK+ LK ++ LE EE++ + L+ I N Sbjct: 362 RKLEKDITDYENNKDKKEEDLKDSIKKLKNKIKQLETEENKKKEQVDDLLMQIENF 417 >gi|315124381|ref|YP_004066385.1| dna translocase spoiiie [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018103|gb|ADT66196.1| dna translocase spoiiie [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 941 Score = 36.7 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 16/153 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSEY------ILSLDEKNRILIKKIEDIRARRNSNSA 56 DI+ I N + + K++++E I + + + R + K E + + Sbjct: 273 DIKQIDTNKNLDEPSYKRKNIEIPVSKQEVKPKIFTKELELRENLIKKEKLEQEYKAYQN 332 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I L + +K E L+E I + E I E I Sbjct: 333 EI----------LENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESNKIN 382 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + N + P L+ + E Sbjct: 383 ENKNPDKADNIFEFAPIVEELNHPYIEPTPIKN 415 >gi|211578412|ref|NP_001096096.2| slow myosin heavy chain 2 [Danio rerio] gi|209972646|tpg|DAA06339.1| TPA_exp: slow myosin heavy chain 2 [Danio rerio] Length = 1939 Score = 36.7 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ R N + K+R+ + E+ ++E + S S ++ + Sbjct: 1432 MVDVE--RSNAAAAALDKKQRNFDKVLAEWKQKYEE---SQTELESAQKESRSLSTELFK 1486 Query: 61 AIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 E +L ++++K E L+E++ L ++ E ++ + Sbjct: 1487 LKNSYEESLDHLESMKRENKNLQEEISDLTEQLGESGKNIHE 1528 >gi|149637384|ref|XP_001512411.1| PREDICTED: similar to intersectin long isoform 1 [Ornithorhynchus anatinus] Length = 1723 Score = 36.7 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 41/110 (37%), Gaps = 8/110 (7%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 Q +R + ++ + R + + + ++ R I + ++ ++N + ++ Q E Sbjct: 580 QQLRDQLDEVEK--ETRSKLQEIDIFNNQLKELRE-IHSKQQLQKQKNLEAERLKQKEQE 636 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 ++ K + Q E+E+ + + P P EE Sbjct: 637 KKTVELEKQKEDV-----QRRAHEREKPWPDRAQQDEDYHRPKKPHEEER 681 >gi|114657235|ref|XP_001171923.1| PREDICTED: GRINL1A upstream protein isoform 4 [Pan troglodytes] Length = 407 Score = 36.7 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 252 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 311 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 312 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 370 >gi|47229657|emb|CAG06853.1| unnamed protein product [Tetraodon nigroviridis] Length = 982 Score = 36.7 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 36/98 (36%), Gaps = 2/98 (2%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETSTLKEQLP 85 + + D R ++ + ++ R++ + A+ E D L +E ++L++ + Sbjct: 562 KQLSEADVARRDTEQRSQSLQRERDAAQREKEAALKEKERLKQERDGLASEKASLEKTVQ 621 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 + + +KKL + + E + Sbjct: 622 AAQGSSQLLEMEVKKLQLTVTSALRERDHEREQKEAAV 659 >gi|315918544|ref|ZP_07914784.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|317059560|ref|ZP_07924045.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313685236|gb|EFS22071.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313692419|gb|EFS29254.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 569 Score = 36.7 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSV 407 E G+ S+ + + Y D +S L G G+ VGR + A +E + G + Sbjct: 408 ECGHIFKLGDKYSKALGASYLDEKGESKI---MLMGCYGIGVGRTMAAAIEQNYDEHG-I 463 Query: 408 TIPTVLRPYMNNLAVIK 424 P+ L PY+ + VI Sbjct: 464 IWPSALAPYL--VDVIP 478 >gi|313219603|emb|CBY30525.1| unnamed protein product [Oikopleura dioica] Length = 187 Score = 36.7 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETST 79 KR E E + L+ + R +KI ++RA + S + A + + NE + Sbjct: 96 KRTFEIHKENVAELEAEKRQANQKISNLRAEKKSL-----EEYAALQQKETEQMNNEMAP 150 Query: 80 LKEQLPI 86 K+Q + Sbjct: 151 YKKQNAM 157 >gi|313678253|ref|YP_004055993.1| proline--tRNA ligase [Mycoplasma bovis PG45] gi|312950316|gb|ADR24911.1| proline--tRNA ligase [Mycoplasma bovis PG45] Length = 478 Score = 36.7 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 75/189 (39%), Gaps = 13/189 (6%) Query: 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCEL 286 ++ PTSEV +L+ I+ K LP+ + A R E + T LR +F E Sbjct: 107 YVRPTSEVLFADLFKKMIVSHKDLPILYNQWANVVRWE-----KTTNPFLRNREFLWQEG 161 Query: 287 VSITRE--EDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQ 344 + + E + + A+ + L + + + AC TY +E + Sbjct: 162 HTCHKSAIEARKLTRDMINVYAKFLKNYLAIPTIIGKKTPYEKFAGACSTYTVEAMMKDG 221 Query: 345 NLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAV-GRCLIAILENYLNA 403 + +S NF S++ +++ ++ +F + + V R L AI+ + + Sbjct: 222 KALQAGTSHYLAQNF-SKKFEISFKNDKNED-EFVYQ---TSWGVSTRLLGAIIMTHGDN 276 Query: 404 DGSVTIPTV 412 G + P V Sbjct: 277 RGIIIPPKV 285 >gi|12053752|emb|CAC20157.1| movement protein [Soil-borne cereal mosaic virus] Length = 326 Score = 36.7 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 17/93 (18%) Query: 1 ML--DIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIR----ARRNSN 54 ML I +++N E +L L E+ R KK+E +R A+R + Sbjct: 231 MLPNSINILKENVPLFKK-----------ESVLDLTEQEREKQKKLETLRSVNEAQRRKS 279 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + ++ + + + V K + + E Sbjct: 280 AQEMQKRNDDLIKANVQKQKAKQLEIDENKKNH 312 >gi|68483159|ref|XP_714514.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] gi|68483260|ref|XP_714465.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] gi|46436033|gb|EAK95403.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] gi|46436089|gb|EAK95458.1| potential nuclear condensin complex SMC ATPase [Candida albicans SC5314] Length = 1171 Score = 36.7 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 5/96 (5%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 + + NP AL + + + I+ L E+ I +K + I + Sbjct: 734 KKLENNP----AALILKQNDLNQQEIIRLTEEIEITKEKCRQYKQEIAIIEKDIAE-FNN 788 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 S ++ LK E + LK+Q+ EK+ + Sbjct: 789 DKGSKINCLKKEVAHLKQQVISKEKQLENQTDKFQA 824 >gi|190570566|ref|YP_001974924.1| hypothetical protein WPa_0100 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190356838|emb|CAQ54208.1| hypothetical protein WP0100 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 388 Score = 36.7 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 38/102 (37%), Gaps = 7/102 (6%) Query: 2 LDIQWIRQNPEHLDIAL-KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I ++ + + + L +++ L + + + D K L K++E + + S +I + Sbjct: 141 HKISYLCKQLQEKEANLTERKKLIIELKRKIDND-KYEELYKEVEKLSKEKEELSKEIDK 199 Query: 61 AIAEG-----NLSLVDALKNETSTLKEQLPILEKEEHEVCSS 97 E + K E ++L KE + + Sbjct: 200 LRKEKDILYMKKEELHKRKEELCVKLDELQCKFKEIDQKNKN 241 >gi|168185673|ref|ZP_02620308.1| ATPase involved in DNA repair [Clostridium botulinum C str. Eklund] gi|169296473|gb|EDS78606.1| ATPase involved in DNA repair [Clostridium botulinum C str. Eklund] Length = 1176 Score = 36.7 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 2/97 (2%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 ++ ++ IL E + L +KIE++ + S ++ E ++ LK L + Sbjct: 597 IKIDNDEILKHQENRKKLQQKIENLTTKMTELSIEVAGITKEEEH-NLNELKLILEKLND 655 Query: 83 -QLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + L K++ K+L I ++ I ++ Sbjct: 656 IDIKNLNKQKENKEIEFKQLKEKIDKYSNDKNVIESN 692 >gi|281355166|ref|ZP_06241660.1| ABC-type uncharacterized transport system [Victivallis vadensis ATCC BAA-548] gi|281318046|gb|EFB02066.1| ABC-type uncharacterized transport system [Victivallis vadensis ATCC BAA-548] Length = 639 Score = 36.7 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 27/69 (39%), Gaps = 8/69 (11%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQ--------IGQAIAEGNLSLVDALKNETSTL 80 I+ L+E+ R + +I++++ +R + + + LK L Sbjct: 539 KIVQLEEELRTVQMQIDELQRKRKPGEKELLSSEQRKVLADFRRKEVEARKELKQVRRQL 598 Query: 81 KEQLPILEK 89 + ++ LE Sbjct: 599 RREIDSLEN 607 >gi|123455572|ref|XP_001315529.1| DNA-directed RNA polymerase, omega subunit family protein [Trichomonas vaginalis G3] gi|121898208|gb|EAY03306.1| DNA-directed RNA polymerase, omega subunit family protein [Trichomonas vaginalis G3] Length = 5185 Score = 36.7 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 9/102 (8%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL---- 67 E +A +K L+ + ++D K IKK+ED A I Q E + Sbjct: 624 EAAKLAEEKDKLDSDLAAVQAIDNKQNEQIKKLEDEIAELK---KNIDQLRKEKDDDLKK 680 Query: 68 --SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 D L E LK+QL + + + + + Sbjct: 681 SEDQKDKLAEEIQNLKDQLKQVAADHEAKKEKTENENKALED 722 >gi|27503680|gb|AAH42459.1| Cgn protein [Mus musculus] Length = 1230 Score = 36.7 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 9/64 (14%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIED-------IRARRNSNSAQIGQAIAEGNLSLVDA 72 KR ++ E I LD + +++E+ ++AR S + A Sbjct: 1138 KRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD--AWRKASRSAAESA 1195 Query: 73 LKNE 76 LK E Sbjct: 1196 LKQE 1199 >gi|260832762|ref|XP_002611326.1| hypothetical protein BRAFLDRAFT_73282 [Branchiostoma floridae] gi|229296697|gb|EEN67336.1| hypothetical protein BRAFLDRAFT_73282 [Branchiostoma floridae] Length = 401 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 43/98 (43%), Gaps = 16/98 (16%) Query: 1 MLD--IQWIRQNPEHLDIALKK--RHLEPQSEYILSL----DEKNRILIKKIEDIRARRN 52 MLD ++ +++ E + +++ +H+ S +I +L ++K R++ + E+++ R Sbjct: 276 MLDRTVRMLKERTEKYEERMRRQDKHIHDLSSHIRTLTHETEKKTRLMESEKEELQKERK 335 Query: 53 SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 + + LK + L + ++E Sbjct: 336 KLEKS--------HTKSEEKLKRKIQELSATIDKKDRE 365 >gi|195156077|ref|XP_002018927.1| GL25691 [Drosophila persimilis] gi|194115080|gb|EDW37123.1| GL25691 [Drosophila persimilis] Length = 472 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 38/92 (41%), Gaps = 7/92 (7%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIK--KIEDIRARRNSNSAQIGQAIAEGNLSL 69 + ++ L+ ++ + + R + ++ED++ + +++ QI + + Sbjct: 160 DIIEKELEGKNADITLST--ENSSERREIQASEQMEDLKEQ--ADAKQIS-SDQQLKDKD 214 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 + L +KEQ+ +E + + ++ Sbjct: 215 TELLLKMVKEMKEQISKMEMQIQARETQMQSH 246 >gi|145475463|ref|XP_001423754.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124390815|emb|CAK56356.1| unnamed protein product [Paramecium tetraurelia] Length = 538 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 47/161 (29%), Gaps = 10/161 (6%) Query: 22 HLEPQSEYILSLDEKNRIL------IKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 HL P S+ I +E + + +K++D + QI + + + + L+ Sbjct: 64 HLAPNSKEIQQEEENRKKIEAYQLYQQKVQDAEQNQKELEKQIEEKLNQQKDEELQNLQK 123 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAI 135 + L I + + ++K+I + + N + Sbjct: 124 QPIEL----QINKGGQLVNADEIQKIIYPWQVLFDDTWKKNYYYNPVTKESVWELPLDIV 179 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLER 176 ++ E +R + V ++ Sbjct: 180 QKLSDYRRQFEHRLYDYQERNFFKFLPKQYVARQREQLFQK 220 >gi|12857504|dbj|BAB31024.1| unnamed protein product [Mus musculus] Length = 270 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 11/96 (11%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN-SNSAQIGQAIA---E 64 + + A +KR+ E ++++ R L ++ E + N ++ A E Sbjct: 171 KEQQEYMEAQEKRNKE-------NIEQLRRKLEQEREQLIKDHNMMVEKKLKAQKALLEE 223 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 G + + E LK + ++K++ K Sbjct: 224 GFKKKAEEMDGEIQQLKHNIEDMKKKQWFHFRYYYK 259 >gi|307185091|gb|EFN71290.1| DC-STAMP domain-containing protein 2 [Camponotus floridanus] Length = 1278 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 28/98 (28%), Gaps = 2/98 (2%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 E ++ D++ + L K ++ N+ + + L +K P+ Sbjct: 1172 EKVVIKDDRRKSL-SKTDEAIIESNNIEKEKNEKKYSAKKEQAKDLGAR-KDVKTLKPMY 1229 Query: 88 EKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILI 125 EK E E K E I + Sbjct: 1230 EKYEEECSIIHKPKQGFQSESFSETSSICIYPGKYHRP 1267 >gi|294828022|ref|NP_712264.2| hypothetical protein LA_2083 [Leptospira interrogans serovar Lai str. 56601] gi|293385868|gb|AAN49282.2| LipL45-related lipoprotein [Leptospira interrogans serovar Lai str. 56601] Length = 309 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 11/91 (12%) Query: 4 IQWIRQNPEHLDIAL---KKRHLEPQSEYILSLDEKNRILIKKI-EDIRARR---NSNSA 56 ++ ++N E + L K+R+ E I + E+NR +I ++ E +A + + + Sbjct: 223 LKDFKENKERILQGLEEQKQRNQEL----INATKEENRRMIDEVKESGKAEKEAIKNAAD 278 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + + I G +AL+N +LK+Q+ Sbjct: 279 EERKNIKSGIDKEKEALENSRKSLKDQVKPQ 309 >gi|296817075|ref|XP_002848874.1| predicted protein [Arthroderma otae CBS 113480] gi|238839327|gb|EEQ28989.1| predicted protein [Arthroderma otae CBS 113480] Length = 784 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 12/108 (11%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSL-DEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 + L L++R E I L D + L K ++ RN ++Q Sbjct: 316 KQINDLKQQLQRR------EEITKLSDTELNDLRKAKSELEQTRNELASQ-----TSKES 364 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 +L + LK + LKE L+ +++ + + V E Sbjct: 365 TLRNNLKEKGKQLKEAEKQLDDARTAHKRYSEEMGTELKQVKQECEKK 412 >gi|126660216|ref|ZP_01731333.1| DNA ligase [Cyanothece sp. CCY0110] gi|126618518|gb|EAZ89270.1| DNA ligase [Cyanothece sp. CCY0110] Length = 524 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 8/108 (7%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 I+ I + E L +LK++ S + + SL+++N L K+ + N S + + Sbjct: 309 IKAITEEKETLQNSLKQQQETVTSLEKQLQSLEKENNSLQKQ----QEESNKVSQKKDEL 364 Query: 62 IA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 + +V L+N+ T++++ +E + + + + S I Sbjct: 365 EKQLKQKEEIVTKLQNQLETIQQEKDTIETQLKQEIEKITEKSSKIEA 412 >gi|145513678|ref|XP_001442750.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124410103|emb|CAK75353.1| unnamed protein product [Paramecium tetraurelia] Length = 491 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 2/99 (2%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 E E I SL+ + K +++ + S + QI Q + L + E LK+Q Sbjct: 145 EKDREKINSLEISIKQAQAKEQELLQQIESLNQQISQY--QEKLKSKEESNEEFKKLKDQ 202 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 L E + ++ + + I E+ I ++ Sbjct: 203 LHKAEDLQSKMEHQITDIQKNIEKEVNEKNNIKKQYDQY 241 >gi|45657697|ref|YP_001783.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600937|gb|AAS70420.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 309 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 11/91 (12%) Query: 4 IQWIRQNPEHLDIAL---KKRHLEPQSEYILSLDEKNRILIKKI-EDIRARR---NSNSA 56 ++ ++N E + L K+R+ E I + E+NR +I ++ E +A + + + Sbjct: 223 LKDFKENKERILQGLEEQKQRNQEL----INATKEENRRMIDEVKESGKAEKEAIKNAAD 278 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPIL 87 + + I G +AL+N +LK+Q+ Sbjct: 279 EERKNIKSGIDKEKEALENSRKSLKDQVKPQ 309 >gi|46111823|ref|XP_382969.1| hypothetical protein FG02793.1 [Gibberella zeae PH-1] Length = 1139 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 4/98 (4%) Query: 7 IRQNPEHLDIALKKRHLE--PQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAE 64 +R+ E L + + + I L+ + L +I D+ + +S+ + Sbjct: 604 LREEIESLQENILMIGQDHVEAKDKIKELEAEKLELKTQITDL--EKKISSSTSDAEASS 661 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 S ++++K E S LKE+ L+ + + Sbjct: 662 KMQSEMESIKTEYSDLKEKTSTLQADLGAAQQLAQNRF 699 >gi|330791229|ref|XP_003283696.1| hypothetical protein DICPUDRAFT_96454 [Dictyostelium purpureum] gi|325086319|gb|EGC39710.1| hypothetical protein DICPUDRAFT_96454 [Dictyostelium purpureum] Length = 888 Score = 36.7 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 N + + ++ ++ I++L +N L K++E+++ + N + + + + Sbjct: 512 TNIDEISEMRDQKEID-----IINLMAENTKLKKEVEELKRKNNLLNKLRSEV--DNEKA 564 Query: 69 LVDALKNETSTLKEQLPILEK 89 LK E+L L++ Sbjct: 565 EKRELKAIIKKCNERLKQLDQ 585 >gi|239612057|gb|EEQ89044.1| myosin type II heavy chain [Ajellomyces dermatitidis ER-3] Length = 2425 Score = 36.7 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 38/113 (33%), Gaps = 20/113 (17%) Query: 3 DIQWI---RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 D++ +++ E L RH + Q ++ R L + + + + + + ++ Sbjct: 1180 DVKKFESEKKSLEAEKQTLASRHSDMQ--------QRFRELQAQTDAMISEKKNLEREVA 1231 Query: 60 QAIA---EGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 +A L + LKEQL ++ + S + Sbjct: 1232 DVKKLLEAKISEDAEAGQSRKMLDQQVKDLKEQLYAVQADLSRERQSRDDVQM 1284 >gi|170728112|ref|YP_001762138.1| hypothetical protein Swoo_3784 [Shewanella woodyi ATCC 51908] gi|169813459|gb|ACA88043.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908] Length = 1224 Score = 36.7 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 39/104 (37%), Gaps = 5/104 (4%) Query: 3 DIQWI----RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 D++ + R E ++ +L R + Q + + LD + L ++ ++ + + + Sbjct: 659 DLRRLFDDKRSEQEKINQSLSLRKADAQ-KSLSRLDSDLKQLKQQHQEWLEEQKEQALEA 717 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLI 102 +V AL N+ + +K + + ++ Sbjct: 718 RMEKNAYWQEVVGALDNQLNQIKSNIEQRRAHAKSEQKACEQWY 761 >gi|312147631|gb|ADQ30292.1| hypothetical protein BbuJD1_PV41 [Borrelia burgdorferi JD1] Length = 188 Score = 36.7 bits (83), Expect = 8.2, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 32/69 (46%) Query: 39 ILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 + KIE++RA ++ + + + + +++LK+E + ++ I E E + C Sbjct: 109 NIRTKIENLRAEIDALNKASSKKNKQVDNEEINSLKSELNEYVKEYSIREMELYYECMKK 168 Query: 99 KKLISCIPN 107 + I + Sbjct: 169 LARLHGIES 177 >gi|261202072|ref|XP_002628250.1| myosin type II heavy chain [Ajellomyces dermatitidis SLH14081] gi|239590347|gb|EEQ72928.1| myosin type II heavy chain [Ajellomyces dermatitidis SLH14081] Length = 2415 Score = 36.7 bits (83), Expect = 8.2, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 38/113 (33%), Gaps = 20/113 (17%) Query: 3 DIQWI---RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 D++ +++ E L RH + Q ++ R L + + + + + + ++ Sbjct: 1180 DVKKFESEKKSLEAEKQTLASRHSDMQ--------QRFRELQAQTDAMISEKKNLEREVA 1231 Query: 60 QAIA---EGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 +A L + LKEQL ++ + S + Sbjct: 1232 DVKKLLEAKISEDAEAGQSRKMLDQQVKDLKEQLYAVQADLSRERQSRDDVQM 1284 >gi|86153343|ref|ZP_01071547.1| DNA translocase ftsK [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843069|gb|EAQ60280.1| DNA translocase ftsK [Campylobacter jejuni subsp. jejuni HB93-13] Length = 946 Score = 36.7 bits (83), Expect = 8.2, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 16/153 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSA 56 DI+ I N + + K++++E I + + + R + K E + + Sbjct: 278 DIKQIDTNKNLDEPSYKRKNIEIPVSNQEVKPKIFTKELELRENLIKKEKLEQEYKAYQN 337 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I L + +K E L+E I + E I E I Sbjct: 338 EI----------LENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESDKIN 387 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + N + P L+ + E Sbjct: 388 ENKNLDKADNIFEFAPIVEELNHPYIEPTPIKN 420 >gi|312793685|ref|YP_004026608.1| ATP-dependent chaperone clpb [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180825|gb|ADQ40995.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor kristjanssonii 177R1B] Length = 864 Score = 36.7 bits (83), Expect = 8.2, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 16/88 (18%) Query: 32 SLDEKNRILIK---KIEDIRARRN--------SNSAQIGQAIAEGNL-----SLVDALKN 75 LDE R +++ + ++ N +I Q + + L Sbjct: 413 ELDEITRKIMQLRIEKNVLQKEENPSAKQRIEEIEKEIAQLQSRADELSAQWEYEKELIK 472 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLIS 103 E +KE++ ++ + E + Sbjct: 473 EVRRIKEEIENVKIQIEEAERNYDLNRL 500 >gi|295661183|ref|XP_002791147.1| DNA repair protein rad50 [Paracoccidioides brasiliensis Pb01] gi|226281074|gb|EEH36640.1| DNA repair protein rad50 [Paracoccidioides brasiliensis Pb01] Length = 1280 Score = 36.7 bits (83), Expect = 8.2, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 7/79 (8%) Query: 3 DIQWIRQ--NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +I+ +R+ N E + ++H + + ++++ L ++IE +RA + S ++ + Sbjct: 136 NIKALRKKQNEELAKYKIMEQHAKENKDKADRAEKRSIKLQEEIEALRAESHELSKEMRR 195 Query: 61 AIAEGNLSLVDALKNETST 79 A L D E+ + Sbjct: 196 A-----AELADKAWKESES 209 >gi|206976979|ref|ZP_03237880.1| S-layer domain protein [Bacillus cereus H3081.97] gi|206744784|gb|EDZ56190.1| S-layer domain protein [Bacillus cereus H3081.97] Length = 875 Score = 36.7 bits (83), Expect = 8.2, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 14/82 (17%) Query: 7 IRQNPEHLDIA---LKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 ++Q E + L+KR E IL ++ + L K+++++ +++ Q G+ Sbjct: 51 LQQQLEAVKERQIELEKR------EEIL---KQQKELFVKVDELKRKKDELLKQDGEQKV 101 Query: 64 EGNL--SLVDALKNETSTLKEQ 83 + +D LK + ++EQ Sbjct: 102 QLEEVQQELDELKKMQAEIEEQ 123 >gi|168016286|ref|XP_001760680.1| predicted protein [Physcomitrella patens subsp. patens] gi|162688040|gb|EDQ74419.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1383 Score = 36.7 bits (83), Expect = 8.2, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 32/81 (39%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 L+ + + ++D++ + IE +R ++ Q+ QA + T K+ Sbjct: 945 LQAAVDRVSNVDKQIAEAMTAIESLREELDTKEKQLVQAKIDKEAEWEKRRVALTQEHKD 1004 Query: 83 QLPILEKEEHEVCSSLKKLIS 103 L + E + + ++ + Sbjct: 1005 MLDMREHQWQQRWMRREQELL 1025 >gi|72386449|ref|XP_843649.1| variant surface glycoprotein (VSG) [Trypanosoma brucei TREU927] gi|62360665|gb|AAX81075.1| variant surface glycoprotein (VSG), putative [Trypanosoma brucei] gi|70800181|gb|AAZ10090.1| variant surface glycoprotein (VSG), putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 509 Score = 36.7 bits (83), Expect = 8.2, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 4/90 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN--SNSAQIG 59 DIQ++ +D + R + Q + L K ++ E RR + S I Sbjct: 35 HDIQYLEAILAAIDKEMNNRQKQLQVDA--ELIAKWKLAEAAAEQWHERRKYTALSVVIA 92 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEK 89 ++ + + + L K LE Sbjct: 93 TLASKNSEAATEYLSAAAEAKKAINRRLEA 122 >gi|327352784|gb|EGE81641.1| myosin [Ajellomyces dermatitidis ATCC 18188] Length = 2425 Score = 36.7 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 38/113 (33%), Gaps = 20/113 (17%) Query: 3 DIQWI---RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 D++ +++ E L RH + Q ++ R L + + + + + + ++ Sbjct: 1180 DVKKFESEKKSLEAEKQTLASRHSDMQ--------QRFRELQAQTDAMISEKKNLEREVA 1231 Query: 60 QAIA---EGNLSLVDA------LKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 +A L + LKEQL ++ + S + Sbjct: 1232 DVKKLLEAKISEDAEAGQSRKMLDQQVKDLKEQLYAVQADLSRERQSRDDVQM 1284 >gi|326422574|gb|EGD71969.1| hypothetical protein CSMARM5_0116 [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'] Length = 796 Score = 36.7 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 51/126 (40%), Gaps = 9/126 (7%) Query: 3 DIQW----IRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSA 56 +I+ + + E + + L + + + + +++LDE+NR + E ++ R + + Sbjct: 449 NIKLSKNELEKRFETIKLRLSTENEKLSAINDRLIALDEENRKA--EYEQVKKRYDEENK 506 Query: 57 QIGQAIAE-GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 ++ + L L NE + ++ K E+ ++K + + + E + Sbjct: 507 KLENLSNQLKKLREESKLLNEHEKIAIEIKNNSKRIEEIEETIKSTSNYLEKLQSEIKDV 566 Query: 116 GTSANE 121 + Sbjct: 567 NFQEDH 572 >gi|257126291|ref|YP_003164405.1| excinuclease ABC subunit B [Leptotrichia buccalis C-1013-b] gi|257050230|gb|ACV39414.1| excinuclease ABC, B subunit [Leptotrichia buccalis C-1013-b] Length = 657 Score = 36.7 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 1/75 (1%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 NP+ + + + ++ + E ++ + + + I QI + E N Sbjct: 581 NPKSIVREIAESIVDYEIEKENEANKAIKQYKSEKD-IEKEIKKLDKQIKKLAEELNFEE 639 Query: 70 VDALKNETSTLKEQL 84 L+++ + LK+ L Sbjct: 640 AIKLRDKMNELKKLL 654 >gi|225619730|ref|YP_002720987.1| D repair and genetic recombination protein [Brachyspira hyodysenteriae WA1] gi|225214549|gb|ACN83283.1| D repair and genetic recombination protein [Brachyspira hyodysenteriae WA1] Length = 569 Score = 36.7 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 15/96 (15%) Query: 14 LDIALKKRHLEPQSEYILSLDEKNRI--------------LIKKIEDIRARRNSNSAQIG 59 LKK+ + I+S ++ + L K+IE++R + + + +I Sbjct: 308 FINNLKKK-YGSNIKEIISYAKEAKEKLDSLNFSEEDIENLKKEIEELREKTSILAKEIS 366 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVC 95 + A++NE + L + E Sbjct: 367 DIRHNRKEDFIKAIENEMNDLGMSSTKFDVEITLDE 402 >gi|197336681|ref|YP_002158030.1| chromosome partition protein MukB [Vibrio fischeri MJ11] gi|197313933|gb|ACH63382.1| chromosome partition protein MukB [Vibrio fischeri MJ11] Length = 1490 Score = 36.7 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 4/112 (3%) Query: 6 WIRQNPEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA 63 ++RQN + + L+ R LE E +L ++ + +++ ++A+ + S + + Sbjct: 914 FLRQNGKAIVE-LETLQRALEVDPEQFDALKAEHEQIDAQLQSLKAQLFAISDLVERRHH 972 Query: 64 EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 G AL N++S L EQL + + + K+ + + + Sbjct: 973 FG-YEDAVALLNKSSELNEQLKAKLVQAEQARTKAKEQQKQAQSQANQYNQV 1023 >gi|119491437|ref|ZP_01623456.1| hypothetical protein L8106_14260 [Lyngbya sp. PCC 8106] gi|119453432|gb|EAW34595.1| hypothetical protein L8106_14260 [Lyngbya sp. PCC 8106] Length = 688 Score = 36.7 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 9/91 (9%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI-- 62 + +R P+ L+KR L+ I +L+ + ++IE+ ++ + QI + Sbjct: 416 KKLRNYPDEDIQELQKR-LDEVETKINNLNRETGSNQQQIENTQSSVSQLERQIDKLKMN 474 Query: 63 ------AEGNLSLVDALKNETSTLKEQLPIL 87 A+ + + +K++L Sbjct: 475 EMKQVLAQRRIEKTQDAITRLTQVKDRLDQQ 505 >gi|118465991|ref|YP_880545.1| hypothetical protein MAV_1300 [Mycobacterium avium 104] gi|118167278|gb|ABK68175.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 257 Score = 36.7 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 7/122 (5%) Query: 21 RHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 R +P + Y+ +L K ++LI +++++RA+RN + Q+ V LK+E + Sbjct: 14 RGYDPAAVDAYVEALLAKQKLLIDEVQNLRAQRNESGDQLAAL-----RIEVACLKDEVA 68 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 L + P +H + L++ + I + E S + L Sbjct: 69 HLSDTSPTPYAIQHRMTKMLRRTLEEISRMQAEAQAEAESMIAAAAAQVEASHREHQELL 128 Query: 139 RE 140 + Sbjct: 129 AD 130 >gi|114657243|ref|XP_001171909.1| PREDICTED: GRINL1A upstream protein isoform 3 [Pan troglodytes] Length = 451 Score = 36.7 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 2/119 (1%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV--DALKNETSTLKEQLPILEK 89 L E+ R + E + NS I +A + + + + L + +EK Sbjct: 237 KLQEEQRKHSAEKEALLEETNSFLKAIEEANKKMQAAEISLEEKDQRIGELDRLIERMEK 296 Query: 90 EEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 E H++ L + + + + E + + + + + Sbjct: 297 ERHQLQLQLLEHETEMSGELTDSDKERYQQLEEASASLRERIRHLDDMVHCQQKKVKQM 355 >gi|109465234|ref|XP_227472.4| PREDICTED: cingulin [Rattus norvegicus] gi|109467175|ref|XP_001059265.1| PREDICTED: cingulin [Rattus norvegicus] Length = 1335 Score = 36.7 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 9/64 (14%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIED-------IRARRNSNSAQIGQAIAEGNLSLVDA 72 KR ++ E I LD + +++E+ ++AR S + A Sbjct: 1243 KRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD--SWRKASRSAAESA 1300 Query: 73 LKNE 76 LK E Sbjct: 1301 LKQE 1304 >gi|157109822|ref|XP_001650837.1| citron ser/thr kinase [Aedes aegypti] gi|108868404|gb|EAT32629.1| citron ser/thr kinase [Aedes aegypti] Length = 1760 Score = 36.7 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 36/84 (42%), Gaps = 3/84 (3%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN--SNSAQIGQAIAEGN 66 E L ++++ E + E + +L ++ + ++ +R N S + ++ Sbjct: 943 TELEILLEKEQRKNKECE-ETVAALYKQMKDKDAELSKLRQEINQEKTSKTLSESKTSQL 1001 Query: 67 LSLVDALKNETSTLKEQLPILEKE 90 S D L+ + L+ Q+ +K+ Sbjct: 1002 ASEYDELRKKFEDLQNQMVDQQKD 1025 >gi|124512918|ref|XP_001349815.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] gi|23615232|emb|CAD52222.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] Length = 607 Score = 36.7 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 51/159 (32%), Gaps = 10/159 (6%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDE-------KNRILIKKIEDIRARRNSNSAQIGQ 60 +++ + + +K + E E I D+ KN+ E+I+ + + Sbjct: 443 KEDKDIIKEEIKNKDEEITKEEIKKEDKDIIKEEIKNKDEEITKEEIKKEDKDIIKE--E 500 Query: 61 AIAEGNLSLVDALKNETSTL-KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + + +K E + KE++ ++E + + + ++ I Sbjct: 501 IKNKDEEITKEEIKKEDKDIIKEEIKNKDEEITKEEIKKEDKDIIKEEIKNKDEEITKEE 560 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 + + ++ EI + + D K Sbjct: 561 IKKEDKDIIKEEIKNKDEEITKEEIKKEDNNITNDEINK 599 >gi|317106648|dbj|BAJ53153.1| JHL23J11.8 [Jatropha curcas] Length = 846 Score = 36.7 bits (83), Expect = 8.4, Method: Composition-based stats. Identities = 16/177 (9%), Positives = 52/177 (29%), Gaps = 19/177 (10%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQS-EYILSLDEKNRILIKKIED-----------IRARR 51 I+ + +N ++ +K+ ++ + + ++++ + L ++ E +R + Sbjct: 262 IKQLEKNKREVEK--EKKRMDLELQKEKRQIEKEQKRLQEEAEKDEKRREKEESEMRRQL 319 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE---KEEHEVCSSLKKLISCIPNV 108 ++ + + +K+Q I+E K + S Sbjct: 320 KKQQKEVEKEQRHKEKEEAK--MKRQNAIKKQASIMERFLKRSKTDSPCQNEGTSIEETA 377 Query: 109 PLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFS 165 P+ E + + S + + A + + + Sbjct: 378 PVLSGKKSEKMPEAVTMAMDCTLSSNDDIRIDDIRKLHLSSWHHLGHAIRSNRKQHW 434 >gi|195171920|ref|XP_002026750.1| GL13281 [Drosophila persimilis] gi|194111684|gb|EDW33727.1| GL13281 [Drosophila persimilis] Length = 365 Score = 36.7 bits (83), Expect = 8.4, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 15/114 (13%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL---------------VDAL 73 IL L +KNR + ++E ++ R IG+ E S + L Sbjct: 104 KILELSKKNRQMRAELEQMKNRVEKKDQMIGKLERELKASEEKIHHHQELLKKCSSAEEL 163 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 + + + ++++L + E+ + LK C+ + E I AN Sbjct: 164 QAKMNGIQQKLFESRNKNTELQNQLKLAQKCLQHEIGESCNINILANNLNQANW 217 >gi|189240374|ref|XP_974183.2| PREDICTED: similar to zipper CG15792-PD [Tribolium castaneum] Length = 1953 Score = 36.7 bits (83), Expect = 8.4, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNETS 78 R L+ + + L+ R L +++++ + + + + + + LK + Sbjct: 1469 RELDESNVKVEELERIKRQLQAELDELVNNQGTADKNVHELEKAKRSLETQLAELKAQNE 1528 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIP 106 L+++L + E + + +++ L + Sbjct: 1529 ELEDELQLTEDAKLRLEVNMQALRAQFE 1556 >gi|39962871|gb|AAH64474.1| Cgn protein [Mus musculus] Length = 1223 Score = 36.7 bits (83), Expect = 8.4, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 9/64 (14%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIED-------IRARRNSNSAQIGQAIAEGNLSLVDA 72 KR ++ E I LD + +++E+ ++AR S + A Sbjct: 1131 KRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD--AWRKASRSAAESA 1188 Query: 73 LKNE 76 LK E Sbjct: 1189 LKQE 1192 >gi|303240235|ref|ZP_07326754.1| phage related protein [Acetivibrio cellulolyticus CD2] gi|302592145|gb|EFL61874.1| phage related protein [Acetivibrio cellulolyticus CD2] Length = 917 Score = 36.7 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 40/115 (34%), Gaps = 3/115 (2%) Query: 24 EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ 83 + I +L E+N+ + + I+ + + S S + + + LK+ K + Sbjct: 72 NLNDDEIKNLQEQNKKIKQDIKVLEKDKKSISK---RTDKRAKIDEIKKLKDCLKNNKVK 128 Query: 84 LPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 + ++ E+ V + K I N ++ + + + + Sbjct: 129 ISTMQIEDKVVVTEAKMNTDKIRNKLYKDGFKLEFKGKISDKKDIVEYTLWYRTP 183 >gi|237710528|ref|ZP_04541009.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229455250|gb|EEO60971.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 1217 Score = 36.7 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 20/213 (9%), Positives = 53/213 (24%), Gaps = 17/213 (7%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYI----LSLDEKNRILIKKIEDIRARRNSNSAQIG 59 + +I++N + K + + I DE+ R+L ++ E +R + +I Sbjct: 790 LSFIKENATLVIEYQKDKR--DLIDRIPGWQREHDEQKRLLQQERETLRVETSVLQEKID 847 Query: 60 QAIAEGNLSLVD--ALKNETSTLKEQL-----PILEKEEHEVCSSLKKLISCIPNVPLEE 112 E + + L+ + + + + + E Sbjct: 848 LLNKELEEAEENVRELQKNLEAYSKISAYDWYKPHQDIFRSETAQTIQTTKTCMELIDEL 907 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLA 172 + H ++ D++ V + Sbjct: 908 TRQANQFTQVQSKLRKEVNLFTGHFDEDNTFKFRVKFNEDWEYVRFADELHDFVEENRID 967 Query: 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEA 205 + + + H + +L E Sbjct: 968 EY----IRRINNEHWDTFKRISMDTSMLTSSED 996 >gi|115708308|ref|XP_001197181.1| PREDICTED: similar to FLJ00150 protein, partial [Strongylocentrotus purpuratus] gi|115760245|ref|XP_001197561.1| PREDICTED: similar to FLJ00150 protein, partial [Strongylocentrotus purpuratus] Length = 919 Score = 36.7 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 49/105 (46%), Gaps = 7/105 (6%) Query: 10 NPEHLDIALKKRHLEPQS-----EYILSLDEKNRILIKKIEDIRARRNSNSAQIG--QAI 62 + E + L+ R E ++ + I S +N+ + + +D++ R +I Q Sbjct: 742 DQETVRAQLENRQRELETLTQQKDSIQSRLHQNQEDLVQYDDLKNRIQDLENEISDQQEK 801 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPN 107 E + ++A + ++L+E+ +E+E+++ ++L + + Sbjct: 802 GEKSKDELEAARMRVASLQEEKKAIEREKNQSDQENEQLRTKWSS 846 >gi|47222923|emb|CAF99079.1| unnamed protein product [Tetraodon nigroviridis] Length = 728 Score = 36.7 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 68/246 (27%), Gaps = 28/246 (11%) Query: 16 IALKKRHLEPQSEYILS----LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVD 71 ++R + ++ ++ +DE+ + L K++ +N +A E + + Sbjct: 419 EGHRRRGRKISADKMMEMQAKIDEERKALEAKLDMEEEEKNK-----AKAELEKRENDLL 473 Query: 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKK 131 + E L E+L LEK+ L + E + + Sbjct: 474 KAQQEHQLLLEKLSALEKKVIVGGVDLLAKAEEQERLLQESNKELEERRQRAE----QLR 529 Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191 +E +I E + + K + A E A Q Sbjct: 530 KELAEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQENHREI---- 585 Query: 192 YTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLP 251 ++ + Q+ + D E+ ++ +E I L Sbjct: 586 -----------EDLLENIRQLSRELRLQMLIIDSFIPQEYQEMIENYVHWNEDIGEWQLV 634 Query: 252 LRFTTL 257 + Sbjct: 635 SSVCII 640 >gi|301789625|ref|XP_002930229.1| PREDICTED: moesin-like [Ailuropoda melanoleuca] Length = 577 Score = 36.7 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 32/113 (28%), Gaps = 2/113 (1%) Query: 31 LSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 L L+++ + + E + R + + + + L E + L ++ LE Sbjct: 373 LELEQERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLE 432 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + S + V + + V + ++ Sbjct: 433 MARQKKESEAVEWQQKAQMVQEDLEKTRAELKTAMSTPHVAEPAENEQDEQDE 485 >gi|282850669|ref|ZP_06260044.1| putative chaperone protein ClpB [Lactobacillus gasseri 224-1] gi|282558077|gb|EFB63664.1| putative chaperone protein ClpB [Lactobacillus gasseri 224-1] Length = 706 Score = 36.7 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 13/128 (10%) Query: 2 LDIQWIRQNPEHLDIA--LKKRHLEP--QSEYILSL-DEK--NRIL---IKKIEDIRARR 51 ++++ +PE L +A L R++ + + L DE + L K I+ + Sbjct: 256 HNVKY---DPEALKLAAELSNRYINDRHLPDKAIDLMDEAGAKKSLGMDQKDETSIKNKI 312 Query: 52 NSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLE 111 ++ + +A LK E LK+ L K + + Sbjct: 313 HALEGKKAEAAKNEKYDEAAKLKKEIEDLKKDLKTAGKASELKVTPEDMYSLIQTKTGIP 372 Query: 112 EVPIGTSA 119 I + Sbjct: 373 MSEINANE 380 >gi|281345487|gb|EFB21071.1| hypothetical protein PANDA_020609 [Ailuropoda melanoleuca] Length = 573 Score = 36.7 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 32/113 (28%), Gaps = 2/113 (1%) Query: 31 LSLDEKNRILIKKIEDIRARRNSN--SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 L L+++ + + E + R + + + + L E + L ++ LE Sbjct: 369 LELEQERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLE 428 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREH 141 + S + V + + V + ++ Sbjct: 429 MARQKKESEAVEWQQKAQMVQEDLEKTRAELKTAMSTPHVAEPAENEQDEQDE 481 >gi|83319266|ref|YP_424039.1| putative lipoprotein [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283152|gb|ABC01084.1| lipoprotein, putative [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 533 Score = 36.7 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 47/149 (31%), Gaps = 11/149 (7%) Query: 4 IQWIRQNPEHLDIAL------KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 I+ ++ E + +L KK + + SL+ + ++ + ++ N + + Sbjct: 357 IEELQSELEKIKKSLIEELKIKKDKADQAKNKVSSLEASLKEMMSEKNELDTELNKINNE 416 Query: 58 IGQAIAE-----GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 I + + N ++ +T+ ++ +L E L + I + Sbjct: 417 IVKIKRDLADFRNNALDLEEEIEKTTKIETKLSKELNEYETDLVKLSDEKAQIEKELDDL 476 Query: 113 VPIGTSANENILIRSVGKKPSAIHLSREH 141 + + + + E Sbjct: 477 EKNTEKTISEAMSNFDEQSQNLDKEAYEK 505 >gi|218562506|ref|YP_002344285.1| putative cell division protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|123042874|sp|Q0PA12|FTSK_CAMJE RecName: Full=DNA translocase ftsK gi|112360212|emb|CAL35007.1| putative cell division protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 946 Score = 36.7 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 16/153 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSA 56 DI+ I N + + K++++E I + + + R + K E + + Sbjct: 278 DIKQIDTNKNLDEPSYKRKNIEIPVSNQEVKPKIFTKELELRENLIKKEKLEQEYKAYQN 337 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I L + +K E L+E I + E I E I Sbjct: 338 EI----------LENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESDKIN 387 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + N + P L+ + E Sbjct: 388 ENKNLDKADNIFEFAPIVEELNHPYIEPTPIKN 420 >gi|86150267|ref|ZP_01068494.1| cell division protein FtsK, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839383|gb|EAQ56645.1| cell division protein FtsK, putative [Campylobacter jejuni subsp. jejuni CF93-6] Length = 946 Score = 36.7 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 16/153 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSA 56 DI+ I N + + K++++E I + + + R + K E + + Sbjct: 278 DIKQIDTNKNLDEPSYKRKNIEIPVSNQEVKPKIFTKELELRENLIKKEKLEQEYKAYQN 337 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I L + +K E L+E I + E I E I Sbjct: 338 EI----------LENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESDKIN 387 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + N + P L+ + E Sbjct: 388 ENKNLDKADNIFEFAPIVEELNHPYIEPTPIKN 420 >gi|126290113|ref|XP_001366194.1| PREDICTED: similar to Rad50 [Monodelphis domestica] Length = 1312 Score = 36.7 bits (83), Expect = 8.6, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 13/127 (10%) Query: 23 LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK- 81 LE S+ IL LD++ R ++E +A +NSN IG V AL E L Sbjct: 467 LEGSSDRILELDQELRK--TELELGKAEKNSN---IGALK-----EEVPALLREKGDLDR 516 Query: 82 --EQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSR 139 +L ++ + + ++ + ++ I + + + Sbjct: 517 SLRKLDQEMEQLNHHTMTRTQMEMLTRDKADKDEQIRKIKSRHNDELTSLLGYFPNKKQL 576 Query: 140 EHFEIGE 146 E + + Sbjct: 577 EDWLHSK 583 >gi|123196710|ref|XP_001283607.1| ankyrin repeat protein [Trichomonas vaginalis G3] gi|121843425|gb|EAX70677.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3] Length = 351 Score = 36.7 bits (83), Expect = 8.6, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 37/85 (43%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLV 70 + + +K R L +++ S ++ +KI+ ++ N Q + S + Sbjct: 85 LKSIKKYMKLRILNSIVDFLDSKGKEIYDSTEKIQKLQTELNEIPKQKSDNEIQSLQSQL 144 Query: 71 DALKNETSTLKEQLPILEKEEHEVC 95 + + E++ LKE+L +E ++ Sbjct: 145 NQINEESNKLKEKLNEMESNTNQAD 169 >gi|88597493|ref|ZP_01100727.1| cell division protein FtsK, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|88190085|gb|EAQ94060.1| cell division protein FtsK, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|284926120|gb|ADC28472.1| putative cell division protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315926475|gb|EFV05857.1| DNA translocase FtsK [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 946 Score = 36.7 bits (83), Expect = 8.6, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 16/153 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSA 56 DI+ I N + + K++++E I + + + R + K E + + Sbjct: 278 DIKQIDTNKNLDEPSYKRKNIEIPVSNQEVKPKIFTKELELRENLIKKEKLEQEYKAYQN 337 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I L + +K E L+E I + E I E I Sbjct: 338 EI----------LENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESDKIN 387 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + N + P L+ + E Sbjct: 388 ENKNLDKADNIFEFAPIVEELNHPYIEPTPIKN 420 >gi|332828969|gb|EGK01647.1| hypothetical protein HMPREF9455_02058 [Dysgonomonas gadei ATCC BAA-286] Length = 155 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 37 NRILIKKIEDIRARRNSNSAQIGQAIAEGN---LSLVDALKNETSTLKEQLPILEK 89 + L ++I + + R + S QI +A +G+ + DA K L+ ++ ++ Sbjct: 11 YKKLKEEISALESERPAISKQIAEARDKGDLSENAEYDAAKEAQGLLEAKIAQMKN 66 >gi|328466148|gb|EGF37307.1| DNA topoisomerase IV subunit A [Lactobacillus helveticus MTCC 5463] Length = 818 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 22/110 (20%) Query: 2 LD--IQWIR--QNPEHLDIALKKRHL------------------EPQSEYILSLDEKNRI 39 LD I+ IR +N L ++ +++ K Sbjct: 388 LDQVIKTIRASKNKADAKKNLIAKYKFTANQAEAIVSLQLYRLTNTDVNELIAEQSKLNK 447 Query: 40 LIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 L +K + + R + +I + ++ + E S ++ I EK Sbjct: 448 LAEKYRKLLSDRKTLEKEIIKELSAVKKEFASPRRTEISEESAKVKIDEK 497 >gi|326922246|ref|XP_003207362.1| PREDICTED: leucine-rich repeat flightless-interacting protein 2-like [Meleagris gallopavo] Length = 639 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 21/92 (22%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIE-------DIRARRNSNSAQIGQAIA 63 + L L++R + ++ E+N+ + + I+ D++ N +IG Sbjct: 360 LDELKEGLRQR------DELI---EENQRMQQHIDSITKEVFDLQETINWKDKKIGALER 410 Query: 64 EGN-----LSLVDALKNETSTLKEQLPILEKE 90 + + + D L+ E + LKE + EK Sbjct: 411 QKDYFDCIKNERDELREELADLKETMKRGEKH 442 >gi|315039210|ref|YP_004032778.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus amylovorus GRL 1112] gi|325957684|ref|YP_004293096.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus acidophilus 30SC] gi|312277343|gb|ADQ59983.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus amylovorus GRL 1112] gi|325334249|gb|ADZ08157.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus acidophilus 30SC] gi|327184331|gb|AEA32778.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus amylovorus GRL 1118] Length = 709 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 13/188 (6%) Query: 28 EYILSL-DEK--NRILIKK-IED--IRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLK 81 + + L DE + L+ + ++ ++ + N+ A+ +A + +KN+ + L+ Sbjct: 290 DKAIDLMDEAGAKKALLVQPTDEKSLKNQINALEAKKSEAAKAEDYDKASEIKNKIADLE 349 Query: 82 EQLPILEKEEHEVCSSLKKLISCIP------NVPLEEVPIGTSANENILIRSVGKKPSAI 135 +QL ++ + + + + L ++V + AI Sbjct: 350 KQLKNVDTKNTPEVTEKDIYEIIEQKTKIPMSELHADEAQKNLDLAKKLKQNVIDQDRAI 409 Query: 136 HLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEV 195 + + + D + L V LA + A+ F H +E Sbjct: 410 DVITDAIARKQIFKDSDRPTGSFLLTGPTGVGKTELAK-QLAIQLFGNKDHLIRLDMSEY 468 Query: 196 SAPLLVRD 203 + V Sbjct: 469 QDEMAVNK 476 >gi|296236198|ref|XP_002763227.1| PREDICTED: angiomotin [Callithrix jacchus] Length = 1074 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 503 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 562 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 563 TNEDQRRHIEIRDQALGNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 616 >gi|260101485|ref|ZP_05751722.1| DNA topoisomerase (ATP-hydrolyzing) ParC [Lactobacillus helveticus DSM 20075] gi|260084699|gb|EEW68819.1| DNA topoisomerase (ATP-hydrolyzing) ParC [Lactobacillus helveticus DSM 20075] Length = 818 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 22/110 (20%) Query: 2 LD--IQWIR--QNPEHLDIALKKRHL------------------EPQSEYILSLDEKNRI 39 LD I+ IR +N L ++ +++ K Sbjct: 388 LDQVIKTIRASKNKADAKKNLIAKYKFTANQAEAIVSLQLYRLTNTDVNELIAEQSKLNK 447 Query: 40 LIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 L +K + + R + +I + ++ + E S ++ I EK Sbjct: 448 LAEKYRKLLSDRKTLEKEIIKELSAVKKEFASPRRTEISEESAKVKIDEK 497 >gi|221316876|ref|YP_002527819.1| Erp27 protein [Borrelia burgdorferi 72a] gi|226246931|ref|YP_002776265.1| Erp27 protein [Borrelia burgdorferi 29805] gi|221237341|gb|ACM10182.1| Erp27 protein [Borrelia burgdorferi 72a] gi|226201509|gb|ACO38106.1| Erp27 protein [Borrelia burgdorferi 29805] Length = 255 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 4 IQWIRQNPEHLDIALKKRH-----LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 I+ IR+ E + L+ + LE + + E + +E ++ + N QI Sbjct: 128 IKKIRKQLEDIGDKLEDKGKLEIELEELEDSLTKKKETRKKA---LEKVKEKLNEFKEQI 184 Query: 59 GQAIAEGNLSLVDA 72 G A + + V Sbjct: 185 GSASGQSDAEKVKE 198 >gi|161507593|ref|YP_001577547.1| DNA topoisomerase IV subunit A [Lactobacillus helveticus DPC 4571] gi|160348582|gb|ABX27256.1| DNA topoisomerase IV subunit A [Lactobacillus helveticus DPC 4571] Length = 818 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 22/110 (20%) Query: 2 LD--IQWIR--QNPEHLDIALKKRHL------------------EPQSEYILSLDEKNRI 39 LD I+ IR +N L ++ +++ K Sbjct: 388 LDQVIKTIRASKNKADAKKNLIAKYKFTANQAEAIVSLQLYRLTNTDVNELIAEQSKLNK 447 Query: 40 LIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 L +K + + R + +I + ++ + E S ++ I EK Sbjct: 448 LAEKYRKLLSDRKTLEKEIIKELSAVKKEFASPRRTEISEESAKVKIDEK 497 >gi|33525212|gb|AAH56142.1| NFE2L3 protein [Homo sapiens] Length = 466 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L K E ++ + + I Sbjct: 351 IRDIRRRGKNK-VAAQNCRKRKLDI----ILNLEDDVCNLQAKKETLKREQAQCNKAINI 405 Query: 61 AIAE 64 + Sbjct: 406 MKQK 409 >gi|19703857|ref|NP_603419.1| exonuclease SBCC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714015|gb|AAL94718.1| Exonuclease SBCC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 921 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 10/109 (9%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSE---YILSLDEKNRILIKKIEDIRARRNSNSAQI 58 +DIQ + +N E + R + + E L+LDEK L +E++ + Sbjct: 560 IDIQKLIENQE-FQNSQMLREKKTELEVELRNLNLDEKRENLKNILENLEIEKEKILKNQ 618 Query: 59 GQAIAEGNLSLV------DALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 + V + + ++K ++ E + ++ + + Sbjct: 619 NSIKSNLEEIDVFSKKIKEDINKNIESIKSEIKTFENKLDDLKNPYNEY 667 >gi|54293901|ref|YP_126316.1| hypothetical protein lpl0957 [Legionella pneumophila str. Lens] gi|53753733|emb|CAH15191.1| hypothetical protein lpl0957 [Legionella pneumophila str. Lens] Length = 335 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Query: 35 EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 E+ + L+ K ++ +N+ S Q +A ++ LK + S L Sbjct: 226 EQEKELLTKTQEAEKDKNTISEQ--EATILEKDKEIEKLKEKVSEL 269 >gi|330805269|ref|XP_003290607.1| hypothetical protein DICPUDRAFT_155148 [Dictyostelium purpureum] gi|325079246|gb|EGC32855.1| hypothetical protein DICPUDRAFT_155148 [Dictyostelium purpureum] Length = 1166 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 1/135 (0%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 +L D++ + ++ E ++ R + Q+ + E + K KE LE Sbjct: 374 KLLERDKQKQQEREEKERLQQER-DHQKQLEREEKERLQQEREKQKQLEREEKEHQKQLE 432 Query: 89 KEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEAL 148 +EE E + ++ P ++++ N S+ L Sbjct: 433 REEKERRKAEREKYHTSPVPSTISSRKDSNSSTNSNNNPPSLPNSSGSLPIMSASHINND 492 Query: 149 GLMDFDRATKLSGAR 163 D D A +S + Sbjct: 493 DSCDVDEAATISSSP 507 >gi|255941596|ref|XP_002561567.1| Pc16g12680 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586190|emb|CAP93938.1| Pc16g12680 [Penicillium chrysogenum Wisconsin 54-1255] Length = 497 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 54/156 (34%), Gaps = 16/156 (10%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARR-------------NSNSAQI 58 E +D + + E S + +DE R + ++ ++R +R N QI Sbjct: 115 EEIDNQIARLEKEVDSGTLRLVDE--RKTLTEVSNLRKQRKSFAGLDEAQKGINDIKTQI 172 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 + + AL ++ S ++++L ++ E+ V +L + E + Sbjct: 173 SELRKTLDNPEAKALSDKYSEIQKELDAIKAEQDGVFKNLNA-LRDERTKLRNEQQEKYT 231 Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFD 154 A I + + E + + + + Sbjct: 232 AIRTIKDTYFKARRAYKEYEDEAWRVRRERQKAEQE 267 >gi|136256479|ref|NP_001071367.2| nuclear factor erythroid 2-related factor 3 [Bos taurus] gi|134025922|gb|AAI34643.1| NFE2L3 protein [Bos taurus] gi|296488400|gb|DAA30513.1| nuclear factor (erythroid-derived 2)-like 3 [Bos taurus] Length = 695 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR L+ IL+L++ L K E ++ ++ I Sbjct: 575 IRDIRRRGKNK-VAAQNCRKRKLDV----ILNLEDDVCSLQAKKETLKREQSQCHKAINI 629 Query: 61 AIAE 64 + Sbjct: 630 MKQK 633 >gi|157130798|ref|XP_001662017.1| citron ser/thr kinase [Aedes aegypti] gi|108871786|gb|EAT36011.1| citron ser/thr kinase [Aedes aegypti] Length = 1851 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 36/84 (42%), Gaps = 3/84 (3%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN--SNSAQIGQAIAEGN 66 E L ++++ E + E + +L ++ + ++ +R N S + ++ Sbjct: 1034 TELEILLEKEQRKNKECE-ETVAALYKQMKDKDAELSKLRQEINQEKTSKTLSESKTSQL 1092 Query: 67 LSLVDALKNETSTLKEQLPILEKE 90 S D L+ + L+ Q+ +K+ Sbjct: 1093 ASEYDELRKKFEDLQNQMVDQQKD 1116 >gi|85117990|ref|XP_965355.1| hypothetical protein NCU02968 [Neurospora crassa OR74A] gi|16945384|emb|CAB97305.2| related to transcription factor TMF [Neurospora crassa] gi|28927163|gb|EAA36119.1| predicted protein [Neurospora crassa OR74A] Length = 900 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 15/146 (10%), Positives = 50/146 (34%), Gaps = 10/146 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M +++ ++ + L+KR L++ L K+++ + N ++ Sbjct: 327 MGNLKAAKEKADREIENLRKRARHAD-----ELEKSQNELQKRLDQSQRELNYLRPEV-- 379 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 + +++ L+++ EQ ++ + ++ + +E + I + Sbjct: 380 ---KSKDTIIAELRSQIQKATEQADVMSAKANDKAREQDQRRIAELEESVEALKIEKNLM 436 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGE 146 + + + E + E Sbjct: 437 ADRAKAQADELRKEAEKASEKAKALE 462 >gi|297700054|ref|XP_002827082.1| PREDICTED: myosin-4-like [Pongo abelii] Length = 1854 Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 7/116 (6%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+D++ R N + + K+R+ + E+ ++E + S S ++ + Sbjct: 1348 MIDVE--RSNAACIALDKKQRNFDKVLAEWKQKYEE---TQAELEASQKESRSLSTELFK 1402 Query: 61 AIA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 E +L ++ LK E L++++ L ++ E + +L + E+ Sbjct: 1403 VKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKHIHELEKVKKQLDHEKSE 1458 >gi|291224757|ref|XP_002732368.1| PREDICTED: WD repeat domain 65-like [Saccoglossus kowalevskii] Length = 1192 Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 18/114 (15%) Query: 2 LDIQ-----WIRQNPEHLDIALK--------KRHLEPQSEYILSLDEKNRILIKKIEDIR 48 LDI+ +R E L+ K+ + I E+ + L + + ++ Sbjct: 823 LDIKNKFERRLRDEKE---ANLRLKGETGIMKKKFTSLQKEIEDHKEEIKKLNNEQQKLQ 879 Query: 49 ARRNSNSAQIGQAIAE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 S I E + + LK++ LEK + + +K+ Sbjct: 880 GVIKSLEKDIYGLKKEIQERDETIQDKEKRIYDLKKKNQELEKFKFVLDYKIKE 933 >gi|238620085|ref|YP_002914911.1| hypothetical protein M164_1640 [Sulfolobus islandicus M.16.4] gi|238381155|gb|ACR42243.1| hypothetical protein M164_1640 [Sulfolobus islandicus M.16.4] Length = 308 Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEG--N 66 N E LK + + + K R L KK ++ +N +A++ + + Sbjct: 151 NNVEQRIQQLKAKMKDADKVTKSKISIKLRELYKKRSELYKSKNKINAELRKFEKITLID 210 Query: 67 LSLVDALKNETSTLKEQLP 85 ++ LK + + LK Q+ Sbjct: 211 NEEINDLKKKVTELKSQIK 229 >gi|291327001|ref|ZP_06126635.2| putative cytoplasmic protein [Providencia rettgeri DSM 1131] gi|291312201|gb|EFE52654.1| putative cytoplasmic protein [Providencia rettgeri DSM 1131] Length = 158 Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 9/86 (10%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN-SNSAQIGQA- 61 I+ + + + + L + E L+++ L +I ++A RN S + + Sbjct: 47 IKLLSDRLDLIRRQMASMQLTSEVEKHAELEKEKATLEIEIARLKAVRNKKLSKEAQKLV 106 Query: 62 -------IAEGNLSLVDALKNETSTL 80 I + + + LK L Sbjct: 107 DMPFKRPITKKEQADLGKLKKSVRGL 132 >gi|224048531|ref|XP_002190168.1| PREDICTED: filamin A interacting protein 1 [Taeniopygia guttata] Length = 1213 Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 52/146 (35%), Gaps = 19/146 (13%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVDAL 73 I L+E N+ L K E+++ R+ + ++ EG + Sbjct: 340 RIEELEETNKNLQKTEEELQELRDKIAKGECGNSSLMAEVENLRKRVLEMEGKDEEITKT 399 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 +++ LK +L E+E H L+ LE++ S +++ + Sbjct: 400 ESQCKELKNKLQ--EEEHHSKELKLEVEKLQERMSELEKLEEAFSKSKSECTQLHLNLEK 457 Query: 134 AIHLSREHFEIGE--ALGLMDFDRAT 157 +L+++ E + D + + Sbjct: 458 EKNLTKDLINELEVVKTRVKDLETSE 483 >gi|255933057|ref|XP_002557999.1| Pc12g11820 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582618|emb|CAP80809.1| Pc12g11820 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1296 Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 8/98 (8%) Query: 20 KRHLEPQSEYILSLDEKN---RILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNE 76 R LE + + +++K + +K +E ++A R+ I + A+ + E Sbjct: 241 NRELEELNAKLKVMEKKRADDKEKLKTLEQLQAERDKFETIIQKLQAKYQPQQM-----E 295 Query: 77 TSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + L+++L LE +V + S + L+ Sbjct: 296 VTELRKKLKELETRSDDVERMQAEHESLMEMATLDREM 333 >gi|167534332|ref|XP_001748844.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772806|gb|EDQ86454.1| predicted protein [Monosiga brevicollis MX1] Length = 889 Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 13/92 (14%) Query: 11 PEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLS 68 + +D A ++ S E I L+ + L + + ++ S Sbjct: 391 IDLIDEACANARVQLDSRPEEIDQLERRRLQLQVEATALEKEKDQASKL----------- 439 Query: 69 LVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + ++ E + ++EQL L + + + Sbjct: 440 RLKDVRKELANIEEQLQPLLMKFEMERGRVDE 471 >gi|149177440|ref|ZP_01856044.1| hypothetical protein PM8797T_19101 [Planctomyces maris DSM 8797] gi|148843773|gb|EDL58132.1| hypothetical protein PM8797T_19101 [Planctomyces maris DSM 8797] Length = 264 Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 35/84 (41%), Gaps = 3/84 (3%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSA---QIGQAIAEGNLSLVDALKNETSTLKEQLP 85 + L + NR LI +E+++ + S + L+ + L+ + +K++ Sbjct: 73 QVEDLSKLNRDLILALEELKKLKQEKSKIPTDVSPEEKVKLLAEANRLEKRIAEIKDEPM 132 Query: 86 ILEKEEHEVCSSLKKLISCIPNVP 109 L+KE ++ L K + + Sbjct: 133 TLQKEIDKLKIELNKRENPVAAEV 156 >gi|134045227|ref|YP_001096713.1| condensin subunit Smc [Methanococcus maripaludis C5] gi|132662852|gb|ABO34498.1| condensin subunit Smc [Methanococcus maripaludis C5] Length = 1189 Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 8/83 (9%) Query: 9 QNPEHLDIALKKRHLEPQSE-YILS-----LDEKNRILIKKIEDIRARRNSNSAQIGQAI 62 +N E LK + E +++ IL L EK + +++ N+ +I + Sbjct: 380 ENLETEKKKLKSKVEESETQTEILKQQERKLSEKLNESQNEHYNLKNEFNALENEINKKS 439 Query: 63 AE--GNLSLVDALKNETSTLKEQ 83 N ++ L+ E +K + Sbjct: 440 FNLTKNKETIETLQKELDDIKSE 462 >gi|67524045|ref|XP_660084.1| hypothetical protein AN2480.2 [Aspergillus nidulans FGSC A4] gi|40744642|gb|EAA63798.1| hypothetical protein AN2480.2 [Aspergillus nidulans FGSC A4] gi|259487901|tpe|CBF86940.1| TPA: vesicle-mediated transport protein (Imh1), putative (AFU_orthologue; AFUA_4G02990) [Aspergillus nidulans FGSC A4] Length = 1153 Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 11/93 (11%) Query: 3 DIQWIRQNPEHLDIALKK-RHLEPQS----EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 DI +R++ + + LKK R + + + S + R L K +D++A + Sbjct: 700 DITDLRESIQKIQPELKKLRGESAELRSTKDELKSKTAELRTLESKHDDLQAEVKALKTS 759 Query: 58 IGQAIAEGNLSLVDALKNETS-TLKEQLPILEK 89 I + V L + L +L E Sbjct: 760 I-----SDRETEVKTLNQKIKQELDSRLKAEES 787 >gi|242084920|ref|XP_002442885.1| hypothetical protein SORBIDRAFT_08g004350 [Sorghum bicolor] gi|241943578|gb|EES16723.1| hypothetical protein SORBIDRAFT_08g004350 [Sorghum bicolor] Length = 371 Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 37/124 (29%), Gaps = 5/124 (4%) Query: 13 HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 + L++R E E + + K + + E + R + E V+ Sbjct: 245 KVKENLRRRGGEACLEALDKMWAKKEVADNEKEKAKQER-----FMAALEVEKEALEVEK 299 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 + T K Q+ E E + ++ + + E+ + I+ + Sbjct: 300 KRLATEQKKAQIEEKNAEAEEKRAQAEETRAQADLLKHEKEIMFADPTSLNSIQREWLEK 359 Query: 133 SAIH 136 Sbjct: 360 MQKE 363 >gi|168701284|ref|ZP_02733561.1| hypothetical protein GobsU_17296 [Gemmata obscuriglobus UQM 2246] Length = 143 Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 6/79 (7%) Query: 29 YILSLDEKNRILIKKIEDIR-----ARRN-SNSAQIGQAIAEGNLSLVDALKNETSTLKE 82 + L+E+ R I E +R A +N + + + DALK E Sbjct: 37 KLEKLEEEYRSAITTREQLRQKLLAAEQNVATQKKALADANSAAAAERDALKAEVKARTG 96 Query: 83 QLPILEKEEHEVCSSLKKL 101 + L+ + +L+ + Sbjct: 97 ERDALQGQYDTFRKTLRDM 115 >gi|182416607|ref|ZP_02948023.1| conserved hypothetical protein [Clostridium butyricum 5521] gi|237667069|ref|ZP_04527053.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379538|gb|EDT77023.1| conserved hypothetical protein [Clostridium butyricum 5521] gi|237655417|gb|EEP52973.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 358 Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 13/128 (10%), Positives = 48/128 (37%), Gaps = 15/128 (11%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIE----DIRARRNSN-SAQ- 57 ++ + + P + + + L+E+++ I+++ + +++ N S + Sbjct: 201 VKELEEKPVEVIAGI-------DEAKVKELEEQHQKEIQELNSKISEAQSKLNELESKET 253 Query: 58 --IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 I + + L D + E L++++ + + + ++ L E + Sbjct: 254 EVIKEVDKDKIKELQDQHQKEVEDLRKEIELSKNKVQDLEIKLNDKPKEEIKTTDESLVK 313 Query: 116 GTSANENI 123 +++ Sbjct: 314 FKIHFDDV 321 >gi|145531233|ref|XP_001451385.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124419036|emb|CAK83988.1| unnamed protein product [Paramecium tetraurelia] Length = 1681 Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 43/105 (40%), Gaps = 11/105 (10%) Query: 5 QWIRQ--NPEHLDIALKKRHLEPQSEYILSLDEKNR----ILIKKIEDIRARRNSNSAQI 58 + IR + + AL ++ + + +++++ + LI + E +R + N I Sbjct: 158 KEIRARIEKDEIRRAL----MDLEKAKLTAIEQERKRELEKLIAEREALRMKENELIKDI 213 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 +++ + L + E S + + ++ ++ + LI Sbjct: 214 -ESMEQNTKMLDQMRQEEVSKINNVIEGMQLKQKNNTKLNEDLIH 257 >gi|115649568|ref|XP_782330.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115955058|ref|XP_001183070.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 3348 Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 7/140 (5%) Query: 13 HLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDA 72 +D H++ + + +L DE N+ ++E++R + + G + LV + Sbjct: 2713 LVDENQ---HMKAEVKRLLDEDEINK---VELEELRTGLK-LAKEKGGKLGSELKELVKS 2765 Query: 73 LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132 E LKE+L +E E ++ ++V T + + Sbjct: 2766 RGKEGDGLKEKLKSVETELEAQQKLWEEKYETDVTRYEKKVAELTDELRKVNDEVISVNV 2825 Query: 133 SAIHLSREHFEIGEALGLMD 152 L+ E + +D Sbjct: 2826 EIKKLTSERNSLKVMNSELD 2845 >gi|83319568|ref|YP_424228.1| hypothetical protein MCAP_0241 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283454|gb|ABC01386.1| membrane protein, putative [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 556 Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Query: 27 SEYILSLDEKNRI-LIKKIEDIRARRNSNSAQIGQ--AIAEGNLSLVDALKNETSTLKEQ 83 + ++ + ++ R L +++ ++ + N QI + + S ++ L + TLK + Sbjct: 419 LDNLIDIAKQKREQLTQRLRELASEENDLDKQIKKSTLEKQNLESEINNLNEKIKTLKIE 478 Query: 84 LPILEKEEHEVCSSLK 99 + + + + Sbjct: 479 NEQISDQVNNYELESQ 494 >gi|18976713|ref|NP_578070.1| hypothetical protein PF0341 [Pyrococcus furiosus DSM 3638] gi|18892295|gb|AAL80465.1| hypothetical protein PF0341 [Pyrococcus furiosus DSM 3638] Length = 322 Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Query: 4 IQWIRQNPEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 ++ +R+ E + +L R E + +L R ++++IE IR S ++++ Sbjct: 27 LKALRE-WERVKSSLADSERLGEYSILALTALVALRREIMQEIESIREELFSLNSKLDSY 85 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKE 90 E S ++ E LKE + L++ Sbjct: 86 KVENEKS-FKRIEKEIEKLKENIDELDRR 113 >gi|320167733|gb|EFW44632.1| DAAM1 protein [Capsaspora owczarzaki ATCC 30864] Length = 1069 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 33/87 (37%), Gaps = 19/87 (21%) Query: 23 LEPQSEYILS-------LDEKNRI---LIKKIEDIRARRNSNSAQIGQAIAEGNLS---- 68 ++ + ++S DE R L +++E + +I + + + Sbjct: 417 IKIDVDKLVSGFAAQDRFDESQRERDALKQRVEVAEKQVKDQETEITKLKRAKDKAEREV 476 Query: 69 -----LVDALKNETSTLKEQLPILEKE 90 ++ LK + LK++ LE++ Sbjct: 477 RNQDKELEDLKAKYRELKDEKTKLEEQ 503 >gi|302773151|ref|XP_002969993.1| hypothetical protein SELMODRAFT_410667 [Selaginella moellendorffii] gi|300162504|gb|EFJ29117.1| hypothetical protein SELMODRAFT_410667 [Selaginella moellendorffii] Length = 342 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Query: 2 LDIQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 L+ + I + E ++ L K + E Q+E I L + +R +K+ R + + Sbjct: 106 LNSKLILQVTKQKEEIENKLMKVNKE-QAEKIQELQKDSRESLKEENTKLTERVAELEEK 164 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKE 90 + LK+ETS LK++ L++E Sbjct: 165 LKEETSKRKEETSKLKDETSKLKDETSKLKEE 196 >gi|296189602|ref|XP_002742867.1| PREDICTED: kinesin-like protein KIF27 [Callithrix jacchus] Length = 1340 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Query: 9 QNPEHLDIALKKRHLEP-QSEYILSLDEKNRILIKKIED-IRARRNSNSAQIGQAIAEGN 66 ++P+ LK+R + + LDE+ + L +++E + R+ + E Sbjct: 898 EDPDAC--NLKRRKGSFGSIDQLQKLDEQKKWLDEEVEKVLNQRQELEELEEDLKKREAI 955 Query: 67 LSLVDALKNETSTLKEQ 83 +S + L E S L+ + Sbjct: 956 VSKKETLLQEKSHLENK 972 >gi|209945010|gb|ACI96736.1| crossover suppressor on 3 of Gowen [Drosophila melanogaster] Length = 744 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 5/141 (3%) Query: 10 NPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---AE 64 + L L++R+ + Q + + L + L I +++A + +++ A +E Sbjct: 538 EIQKLKSELEERNKAFKAQQDKLEYLISDHDTLKSAIINLQAEKKEIESELSTAKVKFSE 597 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 S D L + S L+ ++ E E E+ ++ + + I Sbjct: 598 ELQSQKDNLMKKVSELELEIKRKETELIELEREKNNEMAVLQFKMNRINCLIDQPVTTIK 657 Query: 125 IRSVGKKPSAIHLSREHFEIG 145 K P+ + Sbjct: 658 QLKDSKGPTRTESIPTKVQPE 678 >gi|315230818|ref|YP_004071254.1| chromosome partition smc-like protein [Thermococcus barophilus MP] gi|315183846|gb|ADT84031.1| chromosome partition smc-like protein [Thermococcus barophilus MP] Length = 1087 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 38/93 (40%), Gaps = 7/93 (7%) Query: 10 NPEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 N E L ++ R E I +L + R L +++ ++R ++++ S + Sbjct: 665 NTEELKKKVEALEREKEKLESEINALKVEYRGLERELFELRMKKSNVSKDLDVL-----Q 719 Query: 68 SLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + +D L E L E++ E+ + + Sbjct: 720 TEMDRLLKEDKLLSEEIKESEELIKALEKKIYD 752 >gi|189458807|ref|NP_001032800.2| cingulin [Mus musculus] Length = 1192 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 9/64 (14%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIED-------IRARRNSNSAQIGQAIAEGNLSLVDA 72 KR ++ E I LD + +++E+ ++AR S + A Sbjct: 1100 KRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD--AWRKASRSAAESA 1157 Query: 73 LKNE 76 LK E Sbjct: 1158 LKQE 1161 >gi|157110456|ref|XP_001651110.1| autotransporter adhesin precursor, putative [Aedes aegypti] gi|108878714|gb|EAT42939.1| autotransporter adhesin precursor, putative [Aedes aegypti] Length = 1217 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 56/210 (26%), Gaps = 26/210 (12%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSE--------YILSLDEKNR--------ILIKKIEDIR 48 +W+R+N + + L + LE + I L +++ L + E Sbjct: 847 KWVRENTKKIKE-LTVKGLELEINKMTATHQKEIAELKRQHKDEMMCAVSELKLQYEQKE 905 Query: 49 AR-RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQ--------LPILEKEEHEVCSSLK 99 A R++ + I + +L++ + S + L E E+ LK Sbjct: 906 ADIRHNLQKERDALIEKERQALLERFDKQVSEERSIFEQQRHHLLNEFEIEKERNLKELK 965 Query: 100 KLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 E E V + +E + DF K Sbjct: 966 NRNQYFETQLHELKSDNAKNLEFARKEYVQMLKDRKNKHKEELAKLQNQLEADFAVWKKK 1025 Query: 160 SGARFSVLTGHLAHLERALGQFMIDLHTSE 189 + + R + D Sbjct: 1026 HEETAKMAMEERENTVRQQLRVERDQQIDR 1055 >gi|12857089|dbj|BAB30888.1| unnamed protein product [Mus musculus] Length = 610 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 15/79 (18%) Query: 27 SEYILSLDEKNRILIKKIEDIRARRNSNSA----------QIGQAIA-----EGNLSLVD 71 S+ I L+E N+ L K E+++ R+ + ++ EG + Sbjct: 433 SQRIEELEETNKSLQKAEEELQELRDKIAKGECGNSSLMAEVESLRKRVLEMEGKDEEIT 492 Query: 72 ALKNETSTLKEQLPILEKE 90 + + LK++L E Sbjct: 493 KTEAQCRELKKKLQEEEHH 511 >gi|327271507|ref|XP_003220529.1| PREDICTED: myosin-7B-like [Anolis carolinensis] Length = 1944 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 L I R N + K+R+ + E+ ++E + S S ++ + Sbjct: 1438 LSIDLERANSAAAALDKKQRNFDRIISEWKQKYEE---TQSELESSQKESRSLSTELFKL 1494 Query: 62 IA--EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 E +L ++ LK E L+E++ L + ++ + Sbjct: 1495 KNAYEESLENLETLKRENKNLQEEITDLTDQISMSGKTIHE 1535 >gi|326389506|ref|ZP_08211073.1| chromosome segregation protein SMC [Thermoanaerobacter ethanolicus JW 200] gi|325994511|gb|EGD52936.1| chromosome segregation protein SMC [Thermoanaerobacter ethanolicus JW 200] Length = 1196 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 34/110 (30%), Gaps = 11/110 (10%) Query: 2 LDIQWIRQNPEHLDIAL--KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +++ RQ + + K+++++ ++L L +I ++ I Sbjct: 837 HNLKDKRQEFDREKNNIVEKEKNIKEIESLKVNLSLDREKLQGEIYKLQQEVEKIQKDIS 896 Query: 60 QAIA---------EGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 + L+ E + + E+ +E E + Sbjct: 897 SLEDNIFQEEEDLQKRKEKFSILQQEFTNINEEFHKVEMEMQRFQIEIDN 946 >gi|302848422|ref|XP_002955743.1| hypothetical protein VOLCADRAFT_96721 [Volvox carteri f. nagariensis] gi|300258936|gb|EFJ43168.1| hypothetical protein VOLCADRAFT_96721 [Volvox carteri f. nagariensis] Length = 1671 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 9/88 (10%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI-GQAI 62 I +R++ + AL + E + LD N+ +IE ++ + + + I + Sbjct: 514 IAKLREDKDT---ALVSKQRELDAAK-QRLDAANK----EIEALKQQVSEANRVIVEKLA 565 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKE 90 + V LK LK QL K Sbjct: 566 KAPSPEDVAELKQHIEKLKRQLHSKNKH 593 >gi|123093744|gb|AAI30295.1| AMOT protein [Homo sapiens] gi|313883702|gb|ADR83337.1| Unknown protein [synthetic construct] Length = 676 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 95 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 154 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 155 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 208 >gi|118368173|ref|XP_001017296.1| conserved hypothetical protein [Tetrahymena thermophila] gi|89299063|gb|EAR97051.1| conserved hypothetical protein [Tetrahymena thermophila SB210] Length = 1473 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN--LSLVDALKNE 76 + +E + I L+E+NRI +I I +++ SA+ + S + L E Sbjct: 586 SNKDMESLIKQINQLEEQNRIKDSEISGILQQKDDISAKFIDLKNQTKEMESQIQTLLKE 645 Query: 77 TSTLKEQLPILEK 89 + LK Q+ + Sbjct: 646 INQLKAQIVNNQA 658 >gi|118396528|ref|XP_001030603.1| hypothetical protein TTHERM_01054250 [Tetrahymena thermophila] gi|89284912|gb|EAR82940.1| hypothetical protein TTHERM_01054250 [Tetrahymena thermophila SB210] Length = 994 Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 16/157 (10%), Positives = 48/157 (30%), Gaps = 9/157 (5%) Query: 5 QWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIE-----DIRARRNSNSAQIG 59 + I ++ + + +K + + + + L+ + + K +E +++++ Q Sbjct: 216 KQIEKDLKEIKKQVK----QAEDDQLKRLNAEKKQTKKNLESQMQEELKSQLKGLEEQND 271 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 Q + N D ++ + + +L + ++ + S E+ Sbjct: 272 QNKKKVNQDENDWVEKQGKKYQNELQEEFEIKNRALDRKRNERSDAQKKHDEKFKEAKQR 331 Query: 120 NENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRA 156 L K E + D + Sbjct: 332 VSIQLNDFKSKIIKEQTDHLNQLENEQFDNKRDTQES 368 >gi|328785544|ref|XP_396670.3| PREDICTED: lamin Dm0-like [Apis mellifera] Length = 597 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 14/86 (16%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEY--ILSLDEKNRILIKKIEDIRARRNSNSAQIG 59 +D + + N E L L K+ ++ Q +L + + L + +A R + Sbjct: 118 IDTKRLWDNNEELKSKLDKKLVDLQVAERNLLLYETRYNDLQSQFNQSQAERKKLA---- 173 Query: 60 QAIAEGNLSLVDALKNETSTLKEQLP 85 L+ E LK L Sbjct: 174 --------ERERELEQEVEKLKALLE 191 >gi|328778821|ref|XP_625025.3| PREDICTED: e3 ubiquitin-protein ligase Bre1, partial [Apis mellifera] Length = 930 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 26/71 (36%) Query: 32 SLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 LDE + L K E R R + + Q + L+ + ++ K++ L E Sbjct: 627 ELDELRQQLKKIQESKREERKKLADEDAQIKIKKLEEQAYTLQRQVASQKQEEEALLNEM 686 Query: 92 HEVCSSLKKLI 102 + + + Sbjct: 687 EVTGQAFEDMQ 697 >gi|304373198|ref|YP_003856407.1| Glycyl tRNA synthetase [Mycoplasma hyorhinis HUB-1] gi|304309389|gb|ADM21869.1| Glycyl tRNA synthetase [Mycoplasma hyorhinis HUB-1] Length = 458 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 17/180 (9%) Query: 231 TSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSIT 290 T++ N + + LP + SFR+E + R +F + EL Sbjct: 170 TAQGIFINFKNIQRSMRLKLPFGIGQIGKSFRNEI----TPGNFIFRTREFEQMELEIFC 225 Query: 291 REEDSFTEHERMLSCAEEI----LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNL 346 E + + L+ ++ LK RV +L + T D+E Sbjct: 226 HPEQANQIFDDYLNKIQDFLFNELKINKDLVRVRHHKQEELAHYSLATSDIEFLFLF--G 283 Query: 347 YREISSCSTCGNFQ------SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENY 400 + E+ + +F + Y DP + F + + S + V R L+A+L N+ Sbjct: 284 WGELIGLANRSDFDLKAHSAASGEKIDYLDPFTNQKFFPYIIEPS-MGVDRLLLAVLTNF 342 >gi|302822418|ref|XP_002992867.1| hypothetical protein SELMODRAFT_187058 [Selaginella moellendorffii] gi|300139315|gb|EFJ06058.1| hypothetical protein SELMODRAFT_187058 [Selaginella moellendorffii] Length = 1264 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 29/243 (11%), Positives = 71/243 (29%), Gaps = 28/243 (11%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI--GQAIAEGNLSL 69 + + K + E + +E+ +L +I ++ + N + +I +A S Sbjct: 767 QKVSRVEKLKGEETKVLE-KKFEEERSMLRVRISELEKKLNERTQEISVAEAALSLRTSE 825 Query: 70 VDALK------NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 ++A++ E +KE + + E+ ++ + + EE + + Sbjct: 826 LEAMQCSMKELEELREIKEDIDRKNAQTAELLRRQADQLAELESHYKEEQILRKRYFNMM 885 Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 + E+ E + ++ E + Sbjct: 886 EDMKGKIRVYCRSRPLVEKELNENQKAV------------------IISADEFTVEHIWK 927 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHE 243 D T + + V +D T + + A D + + T +Y E Sbjct: 928 DDKTKQFQFDHVFDEHASQDAIFEDTKYLVQSAVDGYNVCIFAY-GQTGSGKTFTIYGPE 986 Query: 244 IIE 246 Sbjct: 987 NNP 989 >gi|298674753|ref|YP_003726503.1| hypothetical protein Metev_0807 [Methanohalobium evestigatum Z-7303] gi|298287741|gb|ADI73707.1| conserved hypothetical protein [Methanohalobium evestigatum Z-7303] Length = 341 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 3/71 (4%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIE--DIRARRNSNSAQIGQAIAEGNLSLVDA 72 L+KR ++ YI+ L+ +++ L +++E + A+R + Q + ++ Sbjct: 20 KQKLEKR-IDELQSYIMELEIESQKLQRRLEKKEKNAKRAISEKQEAEEKLNAANVKIET 78 Query: 73 LKNETSTLKEQ 83 L+NE ++KE+ Sbjct: 79 LQNEIKSIKEE 89 >gi|301113386|ref|XP_002998463.1| myosin-like protein [Phytophthora infestans T30-4] gi|262111764|gb|EEY69816.1| myosin-like protein [Phytophthora infestans T30-4] Length = 3298 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 3/84 (3%) Query: 2 LDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDE--KNRILIKKIEDIRARRNSNSAQIG 59 LD + IR + A+ R + +SLD R + E++ A + ++ Sbjct: 964 LD-ERIRAMETTIAEAMAARDFGKCGDLQVSLDALVSARKKKQTPEELDAEIEKLNEELD 1022 Query: 60 QAIAEGNLSLVDALKNETSTLKEQ 83 + + L+ + LK++ Sbjct: 1023 NLMKKKQFDKCAQLQKDIDVLKKK 1046 >gi|209945012|gb|ACI96737.1| crossover suppressor on 3 of Gowen [Drosophila melanogaster] Length = 744 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 5/141 (3%) Query: 10 NPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---AE 64 + L L++R+ + Q + + L + L I +++A + +++ A +E Sbjct: 538 EIQKLKSELEERNKAFKAQQDKLEYLISDHDTLKSAIINLQAEKKEIESELSTAKVKFSE 597 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 S D L + S L+ ++ E E E+ ++ + + I Sbjct: 598 ELQSQKDNLMKKVSELELEIKRKETELIELEREKNNEMAVLQFKMNRINCLIDQPVTTIK 657 Query: 125 IRSVGKKPSAIHLSREHFEIG 145 K P+ + Sbjct: 658 QLKDSKGPTRTESIPTKVQPE 678 >gi|194212013|ref|XP_001494480.2| PREDICTED: similar to type II hair keratin [Equus caballus] Length = 518 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 6/87 (6%) Query: 16 IALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKN 75 L+ R IL +++ + L + IE+++A+R A + QA +G +L DA K Sbjct: 325 DNLRTRK-----NEILEMNKLIQRLQQDIENVKAQRCKLEATVTQAEQQGEAALTDA-KC 378 Query: 76 ETSTLKEQLPILEKEEHEVCSSLKKLI 102 + + L+E L +++ + ++++ Sbjct: 379 KLAGLEEALQKAKQDMACLLREYQEVM 405 >gi|18978215|ref|NP_579572.1| chromosome segregation protein smc [Pyrococcus furiosus DSM 3638] gi|18894028|gb|AAL81967.1| chromosome segregation protein smc [Pyrococcus furiosus DSM 3638] Length = 1291 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 39/100 (39%), Gaps = 7/100 (7%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA-- 61 I ++ N + AL+ L + E + S++E + +I +R +R I + Sbjct: 951 INALKNNISENEKALEL--LNKELEKLKSIEE---NIKGEIRTLREKRKKLEEDISKLRE 1005 Query: 62 IAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKL 101 E + L+ E +TLK + L + E L Sbjct: 1006 KKEVLQRKLQELEIEANTLKVRDAQLNAQLEEKKYQLTHY 1045 >gi|27923753|sp|P59242|CING_MOUSE RecName: Full=Cingulin Length = 1191 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 9/64 (14%) Query: 20 KRHLEPQSEYILSLDEKNRILIKKIED-------IRARRNSNSAQIGQAIAEGNLSLVDA 72 KR ++ E I LD + +++E+ ++AR S + A Sbjct: 1099 KRQVDEAEEEIERLDSLRKKAQRELEEQHEVNEQLQARIKSLEKD--AWRKASRSAAESA 1156 Query: 73 LKNE 76 LK E Sbjct: 1157 LKQE 1160 >gi|67478047|ref|XP_654450.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|56471531|gb|EAL49095.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS] Length = 511 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 20/177 (11%), Positives = 51/177 (28%), Gaps = 11/177 (6%) Query: 35 EKNRILIKKIEDIRARRNSN--SAQIGQAIAEG-------NLSLVDALKNETSTLKEQLP 85 +K + KK E ++ + N + +IG + S D L E L+E+L Sbjct: 337 KKRQEEQKKEETMKHQLNELKYNKEIGILKEKELIQQNDDKQSDKDDLMKEIQELQEKLN 396 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIG 145 +KE + + +K + ++ E+ + + S + + + Sbjct: 397 TKKKEGVVIRNEEEKKLKECIDM--EKEIKELQESHLRIEEQCKVLKSYVDKFNDKKWLC 454 Query: 146 EALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVR 202 + + + ++ + + +L Sbjct: 455 LMKEEEQIELLATIVVQYKLSHQQVYEKSVIQIFDEIVSKKIPINEWKSYVVGVLNN 511 >gi|328868611|gb|EGG16989.1| hypothetical protein DFA_07970 [Dictyostelium fasciculatum] Length = 1096 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 48/112 (42%), Gaps = 11/112 (9%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN-------SNSAQIGQAIAE 64 E +D L++R+ + + E ++ LD++ + L + ++ ++ +I QA Sbjct: 631 ERIDE-LQQRNDQLEKERVI-LDQQVKTLQEMLDTSSSQIKMSTVTIEEKEKEIVQAKQS 688 Query: 65 GN--LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVP 114 + ++ K E K+++ + + + L++ ++ +++ Sbjct: 689 MEQTKNEIEQTKKEMEQTKKEMEQTKLDMEQTKRVLEERVTLETKTLQDQIH 740 >gi|325479123|gb|EGC82220.1| conserved domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 868 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 9/106 (8%) Query: 4 IQWIRQNPEHLDIALKK--RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNS------ 55 I +RQ E ++ + + E I SL E+ R L +K++ N S Sbjct: 410 INALRQEIELINNDIDNYQKEFNSYEEKISSLLEEKRSLNEKLKATEIEANKISLELENI 469 Query: 56 -AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKK 100 I + I + + + LK E +E+L + ++ Sbjct: 470 IKDIEKTIGQEDRDRFEGLKEELRKTQEKLNNGKSLTEIYTKEIEN 515 >gi|302771279|ref|XP_002969058.1| hypothetical protein SELMODRAFT_91165 [Selaginella moellendorffii] gi|300163563|gb|EFJ30174.1| hypothetical protein SELMODRAFT_91165 [Selaginella moellendorffii] Length = 1264 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 29/243 (11%), Positives = 71/243 (29%), Gaps = 28/243 (11%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI--GQAIAEGNLSL 69 + + K + E + +E+ +L +I ++ + N + +I +A S Sbjct: 767 QKVSRVEKLKGEETKVLE-KKFEEERSMLRVRISELEKKLNERTQEISVAEAALSLRTSE 825 Query: 70 VDALK------NETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENI 123 ++A++ E +KE + + E+ ++ + + EE + + Sbjct: 826 LEAMQCSMKELEELREIKEDIDRKNAQTAELLRRQADQLAELESHYKEEQILRKRYFNMM 885 Query: 124 LIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMI 183 + E+ E + ++ E + Sbjct: 886 EDMKGKIRVYCRSRPLVEKELNENQKAV------------------IISADEFTVEHIWK 927 Query: 184 DLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHE 243 D T + + V +D T + + A D + + T +Y E Sbjct: 928 DDKTKQFQFDHVFDEHASQDAIFEDTKYLVQSAVDGYNVCIFAY-GQTGSGKTFTIYGPE 986 Query: 244 IIE 246 Sbjct: 987 NNP 989 >gi|302816302|ref|XP_002989830.1| hypothetical protein SELMODRAFT_130462 [Selaginella moellendorffii] gi|300142396|gb|EFJ09097.1| hypothetical protein SELMODRAFT_130462 [Selaginella moellendorffii] Length = 4505 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPI 86 + + ++ + K++E I+ S Q+G E N + ALK + ++++L Sbjct: 3290 AVANAEKNLKNAQKELEKIQEEVRQLSEQLGALQKQFEDNTAEQQALKEKADLMEKRLSA 3349 Query: 87 LEKEEHEVCSSLKKLISCIPN 107 E+ + S ++ + + Sbjct: 3350 AERLIVGLGSEHERWSRELGD 3370 >gi|302816855|ref|XP_002990105.1| hypothetical protein SELMODRAFT_131043 [Selaginella moellendorffii] gi|300142118|gb|EFJ08822.1| hypothetical protein SELMODRAFT_131043 [Selaginella moellendorffii] Length = 4505 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETSTLKEQLPI 86 + + ++ + K++E I+ S Q+G E N + ALK + ++++L Sbjct: 3290 AVANAEKNLKNAQKELEKIQEEVRQLSEQLGALQKQFEDNTAEQQALKEKADLMEKRLSA 3349 Query: 87 LEKEEHEVCSSLKKLISCIPN 107 E+ + S ++ + + Sbjct: 3350 AERLIVGLGSEHERWSRELGD 3370 >gi|297797727|ref|XP_002866748.1| hypothetical protein ARALYDRAFT_496939 [Arabidopsis lyrata subsp. lyrata] gi|297312583|gb|EFH43007.1| hypothetical protein ARALYDRAFT_496939 [Arabidopsis lyrata subsp. lyrata] Length = 445 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 36/159 (22%), Gaps = 3/159 (1%) Query: 37 NRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCS 96 R + ++ E I R + QA E + L E K++ + Sbjct: 3 RRKIQEEAEKIEIER-VKEESLKQAKQEEEKRRSEELNKEQGKRKQENDDQLSNTSKDKG 61 Query: 97 SLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGE-ALGLMDFDR 155 + + V I + I + H R G D Sbjct: 62 QINHSKDDVEKVVNPPPRIDGKSVIEDGISVNPRSLCCFHCHRPFALHEILKKGRFHIDC 121 Query: 156 ATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTE 194 + V + + + + Y Sbjct: 122 YKEYRNRNCYVCQQKIPFN-TEGIREYNEHSFWKEKYCP 159 >gi|257875765|ref|ZP_05655418.1| predicted protein [Enterococcus casseliflavus EC20] gi|257809931|gb|EEV38751.1| predicted protein [Enterococcus casseliflavus EC20] Length = 399 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 I +L + + LI + E ++ +N Q Q + + LK +++ LE+ Sbjct: 152 IENLSFEIKELILENEQLQEEKNQLKKQ--QKVVAQQEAEAKELKASLVEANKKVKDLEE 209 Query: 90 EE 91 + Sbjct: 210 QF 211 >gi|224049838|ref|XP_002193607.1| PREDICTED: similar to mitochondrial tumor suppressor 1 isoform 1 [Taeniopygia guttata] Length = 442 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 8/78 (10%) Query: 40 LIKKIEDIRARRNSNS--------AQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEE 91 L KKI+++++ NS S QI + A + L+ E +LK L I ++ Sbjct: 266 LEKKIDELKSENNSLSEKLKLEEQKQIAKEKANLKNPQIMYLEQELESLKAVLEIKNEKL 325 Query: 92 HEVCSSLKKLISCIPNVP 109 H+ L K+ + N Sbjct: 326 HQQDIKLMKMEKLVENNT 343 >gi|51873845|gb|AAH80665.1| 5830443L24Rik protein [Mus musculus] Length = 374 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 11/86 (12%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRN----SNSAQIGQAIAE 64 + + A +KR+ E ++++ R L ++ E + N + + E Sbjct: 265 KEQQEYMEAQEKRNKE-------NIEQLRRKLEQEREQLIKDHNMMVEKKLKEQKALLEE 317 Query: 65 GNLSLVDALKNETSTLKEQLPILEKE 90 G + + E LK + ++K Sbjct: 318 GFKKKAEEMDGEIQQLKHNIEDMKKN 343 >gi|6980088|gb|AAF34720.1|AF229168_1 inner-ear cytokeratin [Rana catesbeiana] Length = 529 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILE 88 I L + L +IE+++A+R AQI +A G L+L DA + + + L+ L + Sbjct: 349 EISELTRAIQRLQAEIENVKAQRAKLEAQIAEAEERGELALKDA-REKMAELEGALQKAK 407 Query: 89 KEEHEVCSSLKKLI 102 ++ ++L+ Sbjct: 408 QDMARQLREYQELM 421 >gi|17933532|ref|NP_525053.1| Kinesin-like protein at 3A [Drosophila melanogaster] gi|4972758|gb|AAD34774.1| unknown [Drosophila melanogaster] gi|6946679|emb|CAB72294.1| EG:BACR25B3.9 [Drosophila melanogaster] gi|7290333|gb|AAF45793.1| Kinesin-like protein at 3A [Drosophila melanogaster] gi|220943716|gb|ACL84401.1| Klp3A-PA [synthetic construct] Length = 1212 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL 84 I L+ + R L+ ++ RN S I +AE + L+ E S L+ +L Sbjct: 586 KIDDLEAERRDLMDQL------RNIKSKDISAKLAEERRKRLQLLEQEISDLRRKL 635 >gi|7486519|pir||T05892 hypothetical protein F6H11.110 - Arabidopsis thaliana gi|2827709|emb|CAA16682.1| predicted protein [Arabidopsis thaliana] Length = 1421 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 2/100 (2%) Query: 15 DIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALK 74 + ++K R YI L+ + + + +N S+Q + A + S + ++ Sbjct: 51 EQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKASVDESDLTHMR 110 Query: 75 NETSTLK--EQLPILEKEEHEVCSSLKKLISCIPNVPLEE 112 +++ + + E+ + K+ IS + E Sbjct: 111 EKSAYVSALAEAKKREESLKKDVGIAKECISSLEKTLHEM 150 >gi|308457029|ref|XP_003090918.1| hypothetical protein CRE_26845 [Caenorhabditis remanei] gi|308260012|gb|EFP03965.1| hypothetical protein CRE_26845 [Caenorhabditis remanei] Length = 751 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 17/163 (10%), Positives = 49/163 (30%), Gaps = 20/163 (12%) Query: 11 PEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA------- 63 E+ + + K E + L+++ R + K++E+ + + ++ + Sbjct: 273 FEYYEESQVK---EAVLDLHKELEKRWRKMDKELEESKKSKEEI--EVTKRKKAVDRIIK 327 Query: 64 ------EGNLSLVDALKNETSTLKEQ--LPILEKEEHEVCSSLKKLISCIPNVPLEEVPI 115 EG DA+ + E+ L + +++ S +P + Sbjct: 328 RLSTRLEGRDLNEDAIAEKVKEFTEEYGLKVAASIGQNWDIVREEMNSRLPVRIKDMEDE 387 Query: 116 GTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 + + S + + + +D + Sbjct: 388 KQRMYMRMFNWLDYYEDSDVKEEVLNLHLELNERWLDIKHKWE 430 >gi|312091137|ref|XP_003146873.1| major antigen [Loa loa] gi|307757963|gb|EFO17197.1| major antigen [Loa loa] Length = 738 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 12/104 (11%) Query: 1 MLDIQ-WIRQNPEHLDIALKKRHLEPQSE-----YILSLDEKNRILIKKIEDIRARRNSN 54 M+D+ I + + + A K P + + LD + LI ++E + RN Sbjct: 48 MIDVDGSIEEKKDTVQQAQK----SPDDKTKERFDVSELDTNIQKLIGRVEKLELERNEY 103 Query: 55 SAQIGQAIAEGNLSLVDALKNET--STLKEQLPILEKEEHEVCS 96 + + +G S + K ET +++QL +E + + Sbjct: 104 REALDRIKKKGVESHIKINKQETIFKNIEDQLVDVEDDRRALEM 147 >gi|257866133|ref|ZP_05645786.1| predicted protein [Enterococcus casseliflavus EC30] gi|257872463|ref|ZP_05652116.1| predicted protein [Enterococcus casseliflavus EC10] gi|257800067|gb|EEV29119.1| predicted protein [Enterococcus casseliflavus EC30] gi|257806627|gb|EEV35449.1| predicted protein [Enterococcus casseliflavus EC10] Length = 399 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 I +L + + LI + E ++ +N Q Q + + LK +++ LE+ Sbjct: 152 IENLSFEIKELILENEQLQEEKNQLKKQ--QKVVAQQEAEAKELKASLVEANKKVKDLEE 209 Query: 90 E 90 + Sbjct: 210 Q 210 >gi|226289954|gb|EEH45438.1| DNA repair protein rad50 [Paracoccidioides brasiliensis Pb18] Length = 1299 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 7/79 (8%) Query: 3 DIQWIRQ--NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 +I+ +R+ N E + ++H + + ++++ L ++IE +RA + S ++ + Sbjct: 187 NIKALRKKQNEELAKYKIMEQHAKENKDRADRAEKRSIKLQEEIEALRAESHELSKEMRR 246 Query: 61 AIAEGNLSLVDALKNETST 79 A L D E+ + Sbjct: 247 A-----AELADKAWKESES 260 >gi|198463466|ref|XP_001352833.2| GA11987 [Drosophila pseudoobscura pseudoobscura] gi|198151267|gb|EAL30334.2| GA11987 [Drosophila pseudoobscura pseudoobscura] Length = 659 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 15/114 (13%) Query: 29 YILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL---------------VDAL 73 IL L +KNR + ++E ++ R IG+ E S + L Sbjct: 104 KILELSKKNRQMRAELEQMKNRVEKKDQMIGKLERELKASEEKIHHHQELLKKCSSAEEL 163 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRS 127 + + + ++++L + E+ + LK C+ + E I AN Sbjct: 164 QAKMNGIQQKLFESRNKNTELQNQLKLAQKCLQHEIGESCNINILANNLNQANW 217 >gi|167376336|ref|XP_001733956.1| synaptonemal complex protein [Entamoeba dispar SAW760] gi|165904727|gb|EDR29895.1| synaptonemal complex protein, putative [Entamoeba dispar SAW760] Length = 719 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 14/175 (8%), Positives = 58/175 (33%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGN 66 +++ E ++ + K + ++ I ++++N L +K+ +++ + N I ++ + Sbjct: 281 LKKRVEEVEKTINKIDINILNDNINEINKQNEELNEKVNELKEEKMKNENSIEKSKQQEE 340 Query: 67 LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 L +++ L E + + + +K+ + I + ++ Sbjct: 341 LKVLNELIRELQETISSVEENQIKNETEIKEIKEEKNQIIQLIEKKEKKNKIPRVMTCTE 400 Query: 127 SVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQF 181 V + + +++ + + + + + Sbjct: 401 EVIEICQIVKENKKEKKCLVICQQQTNEIIISVIIGEELFEGIYHCTIHNIPFNI 455 >gi|167385448|ref|XP_001733376.1| S-adenosylmethionine synthetase [Entamoeba dispar SAW760] gi|165899867|gb|EDR26356.1| S-adenosylmethionine synthetase, putative [Entamoeba dispar SAW760] Length = 1100 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 42/159 (26%), Gaps = 22/159 (13%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQ-------IGQ 60 R E L K E+ +IE ++ S + I Sbjct: 257 RNELEIAKKQLAK--------------EERMKKELEIEQLKKCIKKISKENEELKNSIET 302 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120 E N S L + +KE + + V K+ I P + Sbjct: 303 IKKERNKSEEYILILGCNCIKE-IMNCYGIGYNVNHQNKEENITINVEPSKLNLETFCVE 361 Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKL 159 + G + + E GE DR +++ Sbjct: 362 LPRICIDKGMNITMETETYETHSYGEKEITFTTDRGSEV 400 >gi|254285751|ref|ZP_04960714.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150424248|gb|EDN16186.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 549 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 10/79 (12%) Query: 1 MLDIQWIRQNP--EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58 ML Q +++N + + + + +E DE+ + L +KI + A +N+ + +I Sbjct: 340 ML--QEVKENLTLQDIIKSQASKQVEFTF------DEQIKELHEKIGQLNATKNTLAKKI 391 Query: 59 GQAIAEGNLSLVDALKNET 77 + + ++ E+ Sbjct: 392 SEFTDKKRTQEINDKFKES 410 >gi|19746885|ref|NP_608021.1| streptococcal protective antigen [Streptococcus pyogenes MGAS8232] gi|19749129|gb|AAL98520.1| streptococcal protective antigen [Streptococcus pyogenes MGAS8232] Length = 570 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 10/81 (12%) Query: 8 RQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA----IA 63 R+N E + KKR LE Q E + D N+ +++E R+ + S I + Sbjct: 170 RKNAEVDLKSEKKR-LEAQIEKV-GYDIANK--QQELEKARSDQKELSESIQKLTSRFKK 225 Query: 64 EG--NLSLVDALKNETSTLKE 82 E +D K +L E Sbjct: 226 ESDAKQKELDEAKAANKSLSE 246 >gi|19704624|ref|NP_604186.1| hypothetical protein FN1289 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714924|gb|AAL95485.1| Hypothetical protein FN1289 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 571 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 24/60 (40%), Gaps = 2/60 (3%) Query: 30 ILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK 89 +L L K R + ++++I + +I I + + +K E +K + + Sbjct: 489 VLILYLKWRKVKLEMKEIDEEIKKKNKEIESLIRSYDDE--EEIKKEIDKIKPIVKNYDN 546 >gi|2120542|pir||I40772 hypothetical protein 1 - Campylobacter jejuni gi|633732|gb|AAA61512.1| ORF1 [Campylobacter jejuni subsp. jejuni 81-176] Length = 941 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 16/153 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSA 56 DI+ I N + + K++++E I + + + R + K E + + Sbjct: 273 DIKQIDTNKNLDEPSYKRKNIEIPVSNQEVKPKIFTKELELRENLIKKEKLEQEYKAYQN 332 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I L + +K E L+E I + E I E I Sbjct: 333 EI----------LENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKAETEESDKIN 382 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + N + P L+ + E Sbjct: 383 ENKNLDKADNIFEFAPIVEELNHPYIEPTPIKN 415 >gi|332977383|gb|EGK14161.1| M23/M37 family peptidase [Desmospora sp. 8437] Length = 356 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 9/75 (12%) Query: 35 EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL---------SLVDALKNETSTLKEQLP 85 +K L KK++D++ + +I + E + ++ K E K+ L Sbjct: 33 DKKSELEKKLDDVQKNQAQKEKEIAELKKEIDDHKRKLSSLEEELEKAKTEERKKKKVLK 92 Query: 86 ILEKEEHEVCSSLKK 100 E+E K+ Sbjct: 93 EAEEELDRYDDKYKE 107 >gi|315929506|gb|EFV08700.1| Cell division protein FtsK [Campylobacter jejuni subsp. jejuni 305] Length = 941 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 16/153 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSA 56 DI+ I N + + K++++E I + + + R + K E + + Sbjct: 273 DIKQIDTNKNLDEPSYKRKNIEIPVSNQEVKPKIFTKELELRENLIKKEKLEQEYKAYQN 332 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I L + +K E L+E I + E I E I Sbjct: 333 EI----------LENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESDKIN 382 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + N + P L+ + E Sbjct: 383 ENKNLDKADNIFEFAPIVEELNHPYIEPTPIKN 415 >gi|19111150|ref|NP_573572.1| angiomotin isoform 2 [Homo sapiens] gi|9887326|gb|AAG01851.1| angiomotin [Homo sapiens] gi|29421216|dbj|BAA83023.3| KIAA1071 protein [Homo sapiens] gi|119623032|gb|EAX02627.1| angiomotin, isoform CRA_b [Homo sapiens] Length = 675 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 6/114 (5%) Query: 1 MLDI-QWIRQNPEHLDIALKKRHLEPQSEY---ILSLDEKNRILIKKIEDIRARRNSN-- 54 M D + +R+ E + L ++ E + I L KN+ ++ E + A + Sbjct: 95 MHDFNRDLRERLETANKQLAEKEYEGSEDTRKTISQLFAKNKESQREKEKLEAELATARS 154 Query: 55 SAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + + E + + + L+E+L + +V + L+ Sbjct: 155 TNEDQRRHIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAAC 208 >gi|121613467|ref|YP_001000561.1| cell division protein FtsK, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|143017945|sp|A1VZM0|FTSK_CAMJJ RecName: Full=DNA translocase ftsK gi|87249486|gb|EAQ72446.1| cell division protein FtsK, putative [Campylobacter jejuni subsp. jejuni 81-176] Length = 946 Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 16/153 (10%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQSE------YILSLDEKNRILIKKIEDIRARRNSNSA 56 DI+ I N + + K++++E I + + + R + K E + + Sbjct: 278 DIKQIDTNKNLDEPSYKRKNIEIPVSNQEVKPKIFTKELELRENLIKKEKLEQEYKAYQN 337 Query: 57 QIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIG 116 +I L + +K E L+E I + E I E I Sbjct: 338 EI----------LENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKAETEESDKIN 387 Query: 117 TSANENILIRSVGKKPSAIHLSREHFEIGEALG 149 + N + P L+ + E Sbjct: 388 ENKNLDKADNIFEFAPIVEELNHPYIEPTPIKN 420 >gi|238881151|gb|EEQ44789.1| conserved hypothetical protein [Candida albicans WO-1] Length = 339 Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 53/177 (29%), Gaps = 17/177 (9%) Query: 22 HLEPQSEYILSLDEKNRILIKKIEDIRA-------RRNSNSAQIGQAIAEG-NLSLVDAL 73 ++ + I L+ +N+ +K+++ A + I ++E N +D Sbjct: 164 GIQVYEDRIEELENENKAQQEKLDNANASLTAANSKIKELEQSIDNLLSEKVNDVQIDDS 223 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 + E LK +L + + + N E I + Sbjct: 224 RKEIEQLKRELE---------SRPRLEDLEELQNSLDELESIYQQQLNEKDAIITKLQVE 274 Query: 134 AIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190 HLS E + D +L + + T G D H+S + Sbjct: 275 RDHLSHELYSTPVVHQSTADDSPQELPIYKAAQPTDPSQGKNDWCGLCERDGHSSIN 331 >gi|209945038|gb|ACI96750.1| crossover suppressor on 3 of Gowen [Drosophila melanogaster] Length = 744 Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 5/141 (3%) Query: 10 NPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---AE 64 + L L++R+ + Q + + L + L I +++A + +++ A +E Sbjct: 538 EIQKLKSELEERNKAFKAQQDKLEYLISDHDTLKSAIINLQAEKKEIESELSTAKVKFSE 597 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 S D L + S L+ ++ E E E+ ++ + + I Sbjct: 598 ELQSQKDNLMKKVSELELEIKRKETELIELEREKNNEMAVLQFKMNRINCLIDQPVTTIK 657 Query: 125 IRSVGKKPSAIHLSREHFEIG 145 K P+ + Sbjct: 658 QLKDSKGPTRTESIPTKVQPE 678 >gi|209944996|gb|ACI96729.1| crossover suppressor on 3 of Gowen [Drosophila melanogaster] Length = 744 Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 5/141 (3%) Query: 10 NPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---AE 64 + L L++R+ + Q + + L + L I +++A + +++ A +E Sbjct: 538 EIQKLKSELEERNKAFKAQQDKLEYLISDHDTLKSAIINLQAEKKEIESELSTAKVKFSE 597 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 S D L + S L+ ++ E E E+ ++ + + I Sbjct: 598 ELQSQKDNLMKKVSELELEIKRKETELIELEREKNNEMAVLQFKMNRINCLIDQPVTTIK 657 Query: 125 IRSVGKKPSAIHLSREHFEIG 145 K P+ + Sbjct: 658 QLKDSKGPTRTESIPTKVQPE 678 >gi|154333617|ref|XP_001563065.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1297 Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 68/202 (33%), Gaps = 3/202 (1%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETS 78 R S+ L+ + R + +++R+ + AQ+ + L++ + +T Sbjct: 502 RG-SIDSQRTQVLEVERRQKQQVADELRSLESRVDAQMAPVKKLERKSTELMELAEAQTQ 560 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 L+++L EK HE+ + ++ + + V N + V ++ +A+ + Sbjct: 561 DLRKKLVECEKHLHEMGARVQDYLEDAVQHHVSGVQKRLFTALNECVSGVTERVAAVEEA 620 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + A + S + L+ Q ++ Sbjct: 621 TEKSQQRMADVPQQLATMQQASAKLELQVKVLETSLQSLSRQAQELAAHADTQAGNCQCL 680 Query: 199 LLVRDEAMYGTGQIPKFADDMF 220 ++ E M T + DM Sbjct: 681 GTMQQEVMRLTAVQQRTQQDMK 702 >gi|118398858|ref|XP_001031756.1| hypothetical protein TTHERM_00756410 [Tetrahymena thermophila] gi|89286089|gb|EAR84093.1| hypothetical protein TTHERM_00756410 [Tetrahymena thermophila SB210] Length = 823 Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 31/111 (27%), Gaps = 7/111 (6%) Query: 28 EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQL--P 85 + I L + L K ++ ++ + N +I S + +K + L Sbjct: 214 KDIQKLTLERDELQKNLQKLQQKSNQMQNEI-----RKKESETNRVKEQMKKLTSDKFDK 268 Query: 86 ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH 136 S + N + P +A+E + + Sbjct: 269 NSVFRNTIDLISQHAGCNNTNNSQHPQKPWKNNASEEFADCINQQAIQFNN 319 >gi|55926087|ref|NP_001007490.1| nuclear factor erythroid 2-like 2 [Xenopus (Silurana) tropicalis] gi|51261370|gb|AAH79927.1| nuclear factor (erythroid-derived 2)-like 2 [Xenopus (Silurana) tropicalis] gi|89268940|emb|CAJ82028.1| similar to nfe2l2 (nuclear factor (erythroid-derived 2)-like 2) [Xenopus (Silurana) tropicalis] Length = 589 Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 8/64 (12%) Query: 4 IQWIR---QNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 I+ IR +N +KR + + I+ L+ L + E + A R + + Q Sbjct: 482 IRDIRRRGKNK-VAAQNCRKRKM----DNIVELETDLDKLKYEKEKLLAERGEYNNSLSQ 536 Query: 61 AIAE 64 + Sbjct: 537 LKKK 540 >gi|326335788|ref|ZP_08201968.1| exonuclease SbcC subfamily [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692027|gb|EGD33986.1| exonuclease SbcC subfamily [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 1016 Score = 36.3 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 13/111 (11%) Query: 4 IQWIRQ---NPEHLDIALKKRH--------LEPQSEYILSLDEKNRILIKKIEDIRARRN 52 ++ IR+ N +++K+ +E + ILS+ + LI + E+ + +N Sbjct: 315 LKEIREKIANLNQRIESIQKKFNQLSQTKIVEDDLKQILSIIPLQKELITEEENAQKGKN 374 Query: 53 SNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLIS 103 + + + + + +L+ TLK+Q + K I Sbjct: 375 IIEEE--ERMLKKQKETISSLEINIETLKKQRIDNKILLEVGNWYEKYHIL 423 >gi|322504416|emb|CAM37388.2| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1297 Score = 36.3 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 68/202 (33%), Gaps = 3/202 (1%) Query: 21 RHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIA--EGNLSLVDALKNETS 78 R S+ L+ + R + +++R+ + AQ+ + L++ + +T Sbjct: 502 RG-SIDSQRTQVLEVERRQKQQVADELRSLESRVDAQMAPVKKLERKSTELMELAEAQTQ 560 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 L+++L EK HE+ + ++ + + V N + V ++ +A+ + Sbjct: 561 DLRKKLVECEKHLHEMGARVQDYLEDAVQHHVSGVQKRLFTALNECVSGVTERVAAVEEA 620 Query: 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAP 198 E + A + S + L+ Q ++ Sbjct: 621 TEKSQQRMADVPQQLATMQQASAKLELQVKVLETSLQSLSRQAQELAAHADTQAGNCQCL 680 Query: 199 LLVRDEAMYGTGQIPKFADDMF 220 ++ E M T + DM Sbjct: 681 GTMQQEVMRLTAVQQRTQQDMK 702 >gi|52841161|ref|YP_094960.1| hypothetical protein lpg0926 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628272|gb|AAU27013.1| hypothetical protein lpg0926 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 336 Score = 36.3 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 35 EKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 E+ + L+ K + +N+ S Q +A ++ LK + S L Sbjct: 226 EQEKELLTKTQQAEKDKNTISEQ--EATILEKDKEIEKLKEKVSEL 269 >gi|240104180|ref|YP_002960489.1| hypothetical protein TGAM_2123 [Thermococcus gammatolerans EJ3] gi|239911734|gb|ACS34625.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 301 Score = 36.3 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 49/142 (34%), Gaps = 14/142 (9%) Query: 10 NPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSL 69 +PE + +KK I +L+++ + K+E++ Q + Sbjct: 7 DPEEIK-RIKK--------EIEALEKERNEIRAKLEELEKEL-----QSWIQKRDEKNRE 52 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 V L+ + K + + + ++ + +++ + + + E + T +E +R + Sbjct: 53 VQQLRQKGREYKAKRDEINAQIKQLKKNREEINAKLDLLYQEILEYRTKRDEYNQLRRLN 112 Query: 130 KKPSAIHLSREHFEIGEALGLM 151 I E E Sbjct: 113 MPAEKIKERIEKLEWELQTNPK 134 >gi|224092502|ref|XP_002309637.1| predicted protein [Populus trichocarpa] gi|222855613|gb|EEE93160.1| predicted protein [Populus trichocarpa] Length = 669 Score = 36.3 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 12/111 (10%) Query: 29 YILSLDEKNRILI---KKIEDIRARRNS----NSAQIGQAIAEG---NLSLVDALKNETS 78 + LD + L K+ E++ A+ + + + + L +LK ++ Sbjct: 488 ALEELDATRKQLEELSKRYEELEAKSKADFKFLAKEFKSLKSSQTTLKQELSQSLKEKSE 547 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVG 129 E+L E+E E +K + ++ +++ + V Sbjct: 548 V--EKLLYEEREMKEHEKITRKKLLNDCSILYDQLQECNGNLSSEDNFIVN 596 >gi|183235174|ref|XP_648808.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|169800702|gb|EAL43426.2| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS] Length = 1248 Score = 36.3 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 59/166 (35%), Gaps = 13/166 (7%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 M+ + R+ E + KK+ +E L+ + + + I+ +N +I Q Sbjct: 923 MIHSKLNRKMIELI----KKKEMEQLINDKKDLEIQLSKHQIENQKIQN-QNDELKKINQ 977 Query: 61 AIAEGN---LSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGT 117 + + L+N+ + LKE+ I E E +++ S + I ++ + T Sbjct: 978 TKENEKVLLNEINEKLQNKINELKEKDKIQEDENNKLQSEITNYSKTITSLTEKIELCKT 1037 Query: 118 SANENILIRS-----VGKKPSAIHLSREHFEIGEALGLMDFDRATK 158 + + + ++ E + DF+ K Sbjct: 1038 ENTKIENKIQQKENEIEEIKKEKEIALEELNHEIKKKIKDFENQIK 1083 >gi|77550792|gb|ABA93589.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa Japonica Group] Length = 474 Score = 36.3 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 33/116 (28%), Gaps = 1/116 (0%) Query: 51 RNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPL 110 RN S IG A A + + + + K ++ + + + + Sbjct: 18 RNEVSKFIGIAKAHAEKNDMRKIMCLCADCKNEIAWKDAPTVKEHLVTRGFMDKYKIWTR 77 Query: 111 EEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSV 166 A ++ V ++ ++ E L D + L+ + Sbjct: 78 HGEEQVNGAEN-VVRTQVEDMVHDDGSVEDNIDLKEMLHHADPEELMGLARGLNNF 132 >gi|332284126|ref|YP_004416037.1| transposase TnpC protein [Pusillimonas sp. T7-7] gi|332284151|ref|YP_004416062.1| transposase TnpC protein [Pusillimonas sp. T7-7] gi|332285471|ref|YP_004417382.1| transposase TnpC protein [Pusillimonas sp. T7-7] gi|332286430|ref|YP_004418341.1| transposase TnpC protein [Pusillimonas sp. T7-7] gi|330428079|gb|AEC19413.1| transposase TnpC protein [Pusillimonas sp. T7-7] gi|330428104|gb|AEC19438.1| transposase TnpC protein [Pusillimonas sp. T7-7] gi|330429424|gb|AEC20758.1| transposase TnpC protein [Pusillimonas sp. T7-7] gi|330430383|gb|AEC21717.1| transposase TnpC protein [Pusillimonas sp. T7-7] Length = 532 Score = 36.3 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 10/98 (10%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60 ML+ + N + L L Q + +L E +R L ++ +++R R+ + Sbjct: 3 MLNRAKLPDNIDDLKALL-----SAQLDETQALREAHRTLKEEHQELRVERDLLRQE--- 54 Query: 61 AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 + + + L LK Q+ + E+ Sbjct: 55 --KQFDKQEIQRLMLLLFKLKRQVFGQKSEKLLRQIDQ 90 >gi|325185448|emb|CCA19932.1| guanylatebinding protein putative [Albugo laibachii Nc14] Length = 853 Score = 36.3 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 18/108 (16%) Query: 7 IRQNPEHLDIALKKRHLEPQSEYILSLDEK--------------NRILIKKIEDIRARRN 52 IR + + K ++ E I +L+ K R L ++E + + Sbjct: 565 IRHHIDT--EGQIKENVTLHIEKIKALEVKLQNHKEKASQDEDNRRQLKTEVEQAQRKLM 622 Query: 53 SNSAQIGQAIAE--GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSL 98 I + + + + E LKE + + + Sbjct: 623 EMEKDIEKLQLQLTNKSDTLTEYRTEIKALKESTADMRTSHEQEKETW 670 >gi|322786052|gb|EFZ12663.1| hypothetical protein SINV_01372 [Solenopsis invicta] Length = 1196 Score = 36.3 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 4/110 (3%) Query: 12 EHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI--AEGNLSL 69 E + A K+ L+ + + S E+ L + + + +N + I + +G+ Sbjct: 260 EMVRAATKR--LKEAKKEVQSAKEERDTLSAEQQQLLKEKNKLTFTINDLLEEVKGDNDS 317 Query: 70 VDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSA 119 + E LK + + E E + +++ E Sbjct: 318 KKRAQQELEKLKANIAVREDELKSLKPEYERMKRVEEECTRELQLKEQKR 367 >gi|311267589|ref|XP_003131645.1| PREDICTED: c-Jun-amino-terminal kinase-interacting protein 4-like, partial [Sus scrofa] Length = 247 Score = 36.3 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 4 IQWIRQNPEHL-----DIALKKRHLEPQSEYILS-LDEKNRILIKKIEDIRARRNSNSAQ 57 ++ +R + E L ++H E + +++ + L ++E + ++ Sbjct: 75 LELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVESLESQTRQL--- 131 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + A+ + L+ + LK++ L + E+ + + + Sbjct: 132 --ELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180 >gi|254489476|ref|ZP_05102679.1| hypothetical protein RGAI101_3918 [Roseobacter sp. GAI101] gi|214041983|gb|EEB82623.1| hypothetical protein RGAI101_3918 [Roseobacter sp. GAI101] Length = 313 Score = 36.3 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Query: 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIED--IRARRNSNSAQI 58 M+DI +R + + +D +K+ + + I KN+ KI++ +++R + Sbjct: 95 MIDI--LRLDIKEIDAFAQKKFDDHKEAKIKEKGAKNKKDRAKIDEEILKSR-----KEY 147 Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLP 85 + A+ + V L E TLK+Q+ Sbjct: 148 AKFNADNIHAHVKKLDKEDKTLKDQVT 174 >gi|145488790|ref|XP_001430398.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124397496|emb|CAK63000.1| unnamed protein product [Paramecium tetraurelia] Length = 728 Score = 36.3 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 57/143 (39%), Gaps = 8/143 (5%) Query: 12 EHLDIALKKRH----LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL 67 + + LK ++ + SE ++ + + L +IE ++ + N + GQ + E + Sbjct: 285 DSVRQKLKDQNNNQQSDVSSEELIQIKNDIKKLQSQIEALQTQLNLATFGQGQDMQENQV 344 Query: 68 SLVDALKNETSTLKEQLP-ILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIR 126 +L+ E + L++QL + + ++ ++L +E + Sbjct: 345 ALI---LAEINKLRDQLQNYCTTTDFQNENAKRELRIKFVQDHADEELEKARREFKSKVD 401 Query: 127 SVGKKPSAIHLSREHFEIGEALG 149 ++ + ++ ++ E LG Sbjct: 402 KKVEQTEIAKVEKDIIQLREQLG 424 >gi|313206544|ref|YP_004045721.1| ATP-dependent protease la [Riemerella anatipestifer DSM 15868] gi|312445860|gb|ADQ82215.1| ATP-dependent protease La [Riemerella anatipestifer DSM 15868] gi|315023515|gb|EFT36519.1| ATP-dependent protease La [Riemerella anatipestifer RA-YM] Length = 796 Score = 36.3 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 9/142 (6%) Query: 19 KKRHLEPQSEYILSLDEKNRILIKKIEDI-RARR----NSNSAQIGQAIAEGNLSLVDAL 73 K+ E + L+ +N I K ++ + +R N I + + G + L Sbjct: 219 AKKCYELMHDEFNKLELRNIIHQKTTREMDKNQREYFLNQQIKAIQEELGGGPENDAAEL 278 Query: 74 KNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPS 133 + + +K E+ E + +L P+ P V L K Sbjct: 279 QEKAKKIK----WNEEIEQHFQKEIHRLNRQNPHSPDYNVQRNYLDFFTDLPWEHYSKDI 334 Query: 134 AIHLSREHFEIGEALGLMDFDR 155 E+ E G+ D + Sbjct: 335 FDLNRAENVLNSEHFGMEDVKK 356 >gi|254774178|ref|ZP_05215694.1| hypothetical protein MaviaA2_05825 [Mycobacterium avium subsp. avium ATCC 25291] Length = 257 Score = 36.3 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 7/122 (5%) Query: 21 RHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETS 78 R +P + Y+ +L K ++LI +++++RA+RN + Q+ V LK+E + Sbjct: 14 RGYDPAAVDAYVEALLAKQKLLIDEVQNLRAQRNESGDQLAAL-----RIEVACLKDEVA 68 Query: 79 TLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLS 138 L + P +H + L++ + I + E S + L Sbjct: 69 HLSDTSPTPYAIQHRMTKMLRRTLEEISRMQAEAQAEAESMIAAAAAQVEASHREHQELL 128 Query: 139 RE 140 + Sbjct: 129 AD 130 >gi|124512150|ref|XP_001349208.1| acyl-coA synthetase, PfACS5 [Plasmodium falciparum 3D7] gi|23498976|emb|CAD51056.1| acyl-coA synthetase, PfACS5 [Plasmodium falciparum 3D7] Length = 811 Score = 36.3 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 7/141 (4%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDI-RARRNSNSAQIGQAI 62 ++W+ + E ++ L R+ P + ++ LD N+ + + ++ +N S + Sbjct: 180 LEWLCLDLELVEGLLAHRNEFPHLKNLIILDTLNKSNKINSKGLEKSDKNKKSKE----- 234 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + L VD K + +K+ L + + ++ P Sbjct: 235 KDNGLVNVDYDKEKLKKIKD-LKVKARSVGINIMEFDEMSRKEPKKIKINNEDPNFIASI 293 Query: 123 ILIRSVGKKPSAIHLSREHFE 143 + KP + LS E+F Sbjct: 294 VYTSGTSGKPKGVMLSNENFH 314 >gi|288799613|ref|ZP_06405072.1| MutS2 family protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332861|gb|EFC71340.1| MutS2 family protein [Prevotella sp. oral taxon 299 str. F0039] Length = 844 Score = 36.3 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 40/120 (33%), Gaps = 14/120 (11%) Query: 9 QNPEHLDIALKKRHLEPQSEYILSLDEKN----RILIKKIEDIRARRNS-NSAQIGQAI- 62 ++ E + +K I L++ R ++ E++ N I + Sbjct: 562 KDIEQVIQKYEK--------EIAELNQSRKEILRKAKEQAEELLKESNKKIENTIREIKL 613 Query: 63 AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANEN 122 + L++E + KEQ+ ++K+ + + K E+ EN Sbjct: 614 KQAEKEATRQLRSELNIFKEQVQDIDKQAEDEKIARKIEQIKQRKERHEKYKKEKGEREN 673 >gi|257453020|ref|ZP_05618319.1| prolyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|257467420|ref|ZP_05631731.1| prolyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 593 Score = 36.3 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Query: 349 EISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGS-GVAVGRCLIAILENYLNADGSV 407 E G+ S+ + + Y D +S L G G+ VGR + A +E + G + Sbjct: 432 ECGHIFKLGDKYSKALGASYLDEKGESKI---MLMGCYGIGVGRTMAAAIEQNYDEHG-I 487 Query: 408 TIPTVLRPYMNNLAVIK 424 P+ L PY+ + VI Sbjct: 488 IWPSALAPYL--VDVIP 502 >gi|209945034|gb|ACI96748.1| crossover suppressor on 3 of Gowen [Drosophila melanogaster] Length = 744 Score = 36.3 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 5/141 (3%) Query: 10 NPEHLDIALKKRH--LEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAI---AE 64 + L L++R+ + Q + + L + L I +++A + +++ A +E Sbjct: 538 EIQKLKSELEERNKAFKAQQDKLEYLISDHDTLKSAIINLQAEKKEIESELSTAKVKFSE 597 Query: 65 GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENIL 124 S D L + S L+ ++ E E E+ ++ + + I Sbjct: 598 ELQSQKDNLMKKVSELELEIKRKETELIELEREKNNEMAVLQFKMNRINCLIDQPVTTIK 657 Query: 125 IRSVGKKPSAIHLSREHFEIG 145 K P+ + Sbjct: 658 QLKDSKGPTRTESIPTKVQPE 678 >gi|198436429|ref|XP_002123235.1| PREDICTED: similar to nonmuscle myosin heavy chain [Ciona intestinalis] Length = 1953 Score = 36.3 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Query: 33 LDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEH 92 LDEKNR L + E ++ N S++ + S L+ + LK +L +E+ Sbjct: 1752 LDEKNRKLQSQNEQLQ---NELSSERSSL--QKQESAKSHLERQNKELKLKLSEMEQTVR 1806 Query: 93 EVCSS 97 + Sbjct: 1807 TKQKN 1811 >gi|123448346|ref|XP_001312904.1| viral A-type inclusion protein [Trichomonas vaginalis G3] gi|121894768|gb|EAX99974.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3] Length = 3748 Score = 36.3 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 13/109 (11%) Query: 3 DIQWIRQNPEHLDIALKKRHLEPQS-----EYILSLDEKNRILIKKIEDIRARRNSNSAQ 57 DI+ ++ E + E E DE+ ++L +IE + Q Sbjct: 2514 DIKLTKEENEKAQKNIDDLEQEFDDLNNEYEEESQFDEERKLLETEIERL--------KQ 2565 Query: 58 IGQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIP 106 + N D L E + L E+L LE + + Sbjct: 2566 LISEKKTQNKEKTDKLFKEINDLTEELNSLEDDSENKELQSQIDELNEQ 2614 >gi|123396866|ref|XP_001300981.1| hypothetical protein [Trichomonas vaginalis G3] gi|121882101|gb|EAX88051.1| hypothetical protein TVAG_318060 [Trichomonas vaginalis G3] Length = 857 Score = 36.3 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 8/112 (7%) Query: 4 IQWIRQNPEHLDIALKKRHLEPQ--SEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQA 61 ++ I+ + L +L+++ L SE + +L + + L++KIE + +A + Sbjct: 432 LKEIQTEADDLRDSLREKSLTIDQMSEELRNL-PERQQLLEKIEQFQEEIAKLTATVDLY 490 Query: 62 IAE-----GNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNV 108 + + LK E L+E+L E+ + S ++ + + N Sbjct: 491 KKKQTENDEISENLKNLKIENQNLREKLAQNEENLVAIKSQIETSHNDVENQ 542 >gi|150020781|ref|YP_001306135.1| chromosome segregation protein SMC [Thermosipho melanesiensis BI429] gi|149793302|gb|ABR30750.1| chromosome segregation protein SMC [Thermosipho melanesiensis BI429] Length = 1153 Score = 36.3 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 17/124 (13%) Query: 16 IALKKRHLEPQSEY-ILSLDEKNRILIKKIEDIR--------------ARRNSNSAQIGQ 60 LKK++ + E I L+ + + L + D++ R+ +I + Sbjct: 371 EYLKKKNEYDEIEKNIHKLENEKKSLYNSVNDLKERISMIKEQLEIKYERKKDLDKEIKE 430 Query: 61 AI--AEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118 AE +L E T+KE+ L +E + +L+KLI + E I + Sbjct: 431 LSENAEKYDQKTKSLLEEIKTIKEKTDSLNQEREYLKENLEKLIHRKKEIQSEISIIKKN 490 Query: 119 ANEN 122 +E Sbjct: 491 ISEY 494 >gi|297844042|ref|XP_002889902.1| hypothetical protein ARALYDRAFT_334480 [Arabidopsis lyrata subsp. lyrata] gi|297335744|gb|EFH66161.1| hypothetical protein ARALYDRAFT_334480 [Arabidopsis lyrata subsp. lyrata] Length = 221 Score = 36.3 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 27/122 (22%) Query: 1 MLD--------IQWIRQNPEHLD------IALKKRHLEPQSEYILSLDEKNRILIKKIED 46 M+D ++ R+N E + +K R + + +L E+ L K+ E Sbjct: 103 MIDRLHHYMRELRIRRKNMEVIKKEGALLEGVKARG----LDEVKNLMEEITSLRKRQEQ 158 Query: 47 IRARRNSNSAQIG---------QAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSS 97 + + + S +I Q +EG L + L E L++QL ++ + S Sbjct: 159 LDSELEARSKEIRTERTSAVALQKQSEGFLIEFNRLLEENQVLRDQLHAVDSKLSRSSSK 218 Query: 98 LK 99 Sbjct: 219 KN 220 >gi