RPSBLAST alignment of GI: 254780680 and protein with PDBid: 1ses

>1ses_A Seryl-tRNA synthetase; ligase(synthetase); HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A Length = 421

 Score =  311 bits (797), Expect = 2e-85
 Identities = 136/421 (32%), Positives = 212/421 (50%), Gaps = 11/421 (2%)

Query: 1   MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQ 60
           M+D++ +RQ PE    A++++ +    E +L+LD + + L K++++++  RN  + ++ +
Sbjct: 1   MVDLKRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQVAKRVPK 60

Query: 61  AIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSAN 120
           A  E      +AL      L E+   LE+   E  + L+ L+  +P  P    P+G    
Sbjct: 61  APPEE----KEALIARGKALGEEAKRLEEALREKEARLEALLLQVPLPPWPGAPVGGEEA 116

Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180
              + R  G  P                      R +++SG+R   L G LA  E AL +
Sbjct: 117 NREIKRVGG--PPEFSFPPLDHVALMEKNGWWEPRISQVSGSRSYALKGDLALYELALLR 174

Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239
           F +D                       GTG  P + D ++       +L  T+EV L  L
Sbjct: 175 FAMDFMARRGFLPMTLPSYAREKA-FLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNAL 233

Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI--TREEDSFT 297
           +S EI+  ++LPLR+   AP+FRSEAGS G+D RG++R HQF K E   +     E S  
Sbjct: 234 HSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDR 293

Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357
             + +L  AEEIL+ L+L YR+V + TGD+G    +  D+EV+L  +  YRE  SCS   
Sbjct: 294 AFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALL 353

Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417
           ++Q+RR N RYRDP  +  ++ +TLN + +A  R L  +LEN+   DG V +P  L PYM
Sbjct: 354 DWQARRANLRYRDPEGRV-RYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM 412

Query: 418 N 418
            
Sbjct: 413 G 413