RPSBLAST alignment of GI: 254780680 and protein with PDBid: 2dq3

>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus VF5} Length = 425

 Score =  400 bits (1029), Expect = e-112
 Identities = 207/429 (48%), Positives = 283/429 (65%), Gaps = 7/429 (1%)

Query: 1   MLDIQWIRQNPEHLDIALKKRHLEPQS--EYILSLDEKNRILIKKIEDIRARRNSNSAQI 58
           M+DI  IR+ P+++   L  R  E  S  + +L LD++ R +IK++E +R+ RN  S +I
Sbjct: 1   MIDINLIREKPDYVKERLATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKLSKEI 60

Query: 59  GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118
           G+   EG       ++N    LKE++  LE+E  +V   LK  +  IPN+P   VP+G  
Sbjct: 61  GKLKREGKD--TTEIQNRVKELKEEIDRLEEELRKVEEELKNTLLWIPNLPHPSVPVGED 118

Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178
             +N+ +R  G+        + H+EIGE LG++DF R  KLSG+RF+V+ G  A LERAL
Sbjct: 119 EKDNVEVRRWGEPRKFDFEPKPHWEIGERLGILDFKRGAKLSGSRFTVIAGWGARLERAL 178

Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLT 237
             FM+DLHT + GY E+  P LV+ E + GTGQ+PKF +D++ C  D  +LIPT+EV LT
Sbjct: 179 INFMLDLHT-KKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKCERDNLYLIPTAEVPLT 237

Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297
           NLY  EI++ ++LP+  T   P +R EAG+ G+D RG++RQHQF K ELV I   + S+ 
Sbjct: 238 NLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPDTSYD 297

Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357
           E E+++  AEE+L+ L L YRVV LCTGDLGFSA KTYD+EVW   QN YREISSCS C 
Sbjct: 298 ELEKLVKDAEEVLQLLGLPYRVVELCTGDLGFSAAKTYDIEVWFPSQNKYREISSCSNCE 357

Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417
           +FQ+RRMN+R++D  +   +F HTLNGSG+AVGR L AILENY   DGSV +P VLR Y+
Sbjct: 358 DFQARRMNTRFKDSKTGKNRFVHTLNGSGLAVGRTLAAILENYQQEDGSVVVPEVLRDYV 417

Query: 418 NNLAVIKKE 426
               VI+ E
Sbjct: 418 GT-DVIRPE 425