RPSBLAST alignment of GI: 254780680 and protein with PDBid: 3ial
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, Pro(Cys)RS, translation, ATP-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} Length = 518
Score = 145 bits (367), Expect = 2e-35
Identities = 49/296 (16%), Positives = 102/296 (34%), Gaps = 25/296 (8%)
Query: 132 PSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHG 191
+ + I +A L+D + G V + +E A+ + + + + G
Sbjct: 19 KTRDTFADWFDAIMDAAELVDRRYP--VKG--CVVFRPYGFFMENAIMRLCEEEYA-KVG 73
Query: 192 YTEVSAPLLVRDEAMYGT-GQIPKFADDMFCTTDGR--------WLIPTSEVSLTNLYSH 242
+++ P ++ + + I F + F G L PTSE ++ +++S
Sbjct: 74 ISQILFPTVIPESFLKKESDHIKGFEAECFWVEKGGLQPLEERLALRPTSETAIYSMFSK 133
Query: 243 EIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSI--TREEDSFTEHE 300
+ K LPL+ FR E ++T+ ++R + E T E+ +
Sbjct: 134 WVRSYKDLPLKIHQTCTIFRHET----KNTKPLIRVREIHWNEAHCCHATAEDAVSQLSD 189
Query: 301 RMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQ 360
L + + D A + +V + + + G
Sbjct: 190 YWKVIDTIFSDELCFKGQKLRRVCWDRFPGADYSEVSDVVM-PCGRVLQTAGIHNLGQRF 248
Query: 361 SRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPY 416
S + Y + ++S+ T G R L L + ++ G V +P ++ P
Sbjct: 249 SSTFDILYANKANESVHPYLTCAGIS---TRVLACALSIHGDSGGLV-LPPLIAPI 300