HHsearch alignment for GI: 254780683 and conserved domain: PRK10871

>PRK10871 nlpD lipoprotein NlpD; Provisional.
Probab=99.97  E-value=3.8e-31  Score=184.99  Aligned_cols=81  Identities=35%  Similarity=0.714  Sum_probs=78.0

Q ss_pred             CEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEECCEEEEEECCCCCCCCCEEEEEEEECCEECCHHHHHH
Q ss_conf             59996069865511999998998899841156344112002203124899805788888569999978689805269875
Q gi|254780683|r    1 MVIYVGNDLVELGNTILIRHDDSIVTVYSHIDTPYVQKGQKVSRGHTIGLSGKSGNAQHPQVHFELRKNAIAMDPIKFLE   80 (84)
Q Consensus         1 VVv~~g~~~~~~G~~V~I~h~~g~~t~Y~hl~~i~v~~G~~V~~G~~IG~vg~tg~~~g~hLhfei~~~g~~vdP~~~l~   80 (84)
T Consensus       294 ~VvyaG~~l~gyGnliiIkH~~~~lsaYahn~~~lVkeg~~V~~Gq~Ia~~G~tg~~~-~~LHFEiR~~g~pvdP~~yLP  372 (374)
T PRK10871        294 RVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMGSTGTSS-TRLHFEIRYKGKSVNPLRYLP  372 (374)
T ss_pred             EEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEECCCCEEEEECCCCCCC-CEEEEEEEECCEECCHHHHCC
T ss_conf             8999247878776289998499867861676626678889988999898643789998-308999977998669489764


Q ss_pred             CC
Q ss_conf             03
Q gi|254780683|r   81 EK   82 (84)
Q Consensus        81 ~k   82 (84)
T Consensus       373 kR  374 (374)
T PRK10871        373 QR  374 (374)
T ss_pred             CC
T ss_conf             99