HHsearch alignment for GI: 254780684 and conserved domain: PRK04328

Probab=98.05  E-value=5.3e-05  Score=55.44  Aligned_cols=187  Identities=19%  Similarity=0.203  Sum_probs=101.2

Q ss_pred             CCHHHHHHHHHHHHH--HCCCCEEEEECCCCCCHHHHHHHHH-HHC-CCCCEEEEECCCCCHHHHHHHHHHH-C-CC-CC
Q ss_conf             001112458752002--2358503752667889999999987-407-8983899312465223889999864-2-77-55
Q gi|254780684|r  143 KGFKTGIRVIDIFTP--LCHGQRIGVFAGSGIGKSTLLSMFA-RSD-CFDKVIISLVGERGREVREFIEDYL-G-DN-LK  215 (438)
Q Consensus       143 e~L~TGIr~ID~l~p--ig~GQR~gIfg~~GvGKt~Ll~~i~-~~~-~~dv~V~alIGeR~rev~efi~~~~-~-~~-l~  215 (438)
T Consensus         4 eRv~TGI~gLD~lL~GGlp~gs~~Lv~G~pGtGKT~la~qFl~~g~~~GE~~lyis~eE~~~~l~~~~~~~G~d~~~~~~   83 (250)
T PRK04328          4 KRVKTGIPGMDEILYGGIPERNVVLLSGGPGTGKSIFSQQFLWNGLQMGEPGIYVALEEHPVQVRRNMAQFGWDVRKYEE   83 (250)
T ss_pred             CEECCCCHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHH
T ss_conf             11035856678751599879969999828999989999999999987699779999727999999999980998689865


Q ss_pred             C-EEEEEE--CCCC---CHHHHHHHH------HHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             3-289841--5778---803444444------567778888642679889997098999999876654047784323663
Q gi|254780684|r  216 K-SVVVVA--TSDE---SPILRKMAP------LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP  283 (438)
Q Consensus       216 ~-tvvv~~--t~d~---~~~~r~~a~------~~a~~iAEyfr~~G~~Vll~~Ds~tr~a~A~reis~~~ge~P~~~gyp  283 (438)
T Consensus        84 ~g~l~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~r-vVIDSit~l~~~---------~~~~~r---  150 (250)
T PRK04328         84 EGKFAIVDAFTGGIGEAAEREKYVVKDPDDVRELIDVLRQAIRDIGAKR-VVIDSVSTLYLT---------KPAVAR---  150 (250)
T ss_pred             CCCEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCE-EEEECCHHHHHC---------CHHHHH---
T ss_conf             6977998512333342000001013685359999999999998518988-999370787745---------858899---


Q ss_pred             HHHHHHCCHHHHHHHCCCCCCCCEEEEEEEEECCCC--CCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCC
Q ss_conf             245542004444431136788523554333421676--42027899986126089870427758971311445
Q gi|254780684|r  284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN--HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL  354 (438)
Q Consensus       284 ~~~~~~~~~l~ERag~~~~~~GSiT~~~~v~~~~dd--~~~pi~~~~~~i~DG~i~L~r~la~~g~~Paid~~  354 (438)
T Consensus       151 -~~l~~l~~~l~~~--------g~Ttll~~e~~~~~~~~~~~~---ve~~~DgvI~L~~~~~~~~~~R~l~I~  211 (250)
T PRK04328        151 -SIVMQLKRVLAGL--------GCTSIFVSQVSVGERGFGGPG---VEHAVDGIIRLDLDEIDGELKRSLIVW  211 (250)
T ss_pred             -HHHHHHHHHHHHC--------CCEEEEEECCCCCCCCCCCCC---EEEEEEEEEEEEEECCCCEEEEEEEEE
T ss_conf             -9999999999868--------986999971003656667786---589998999988871399799999999