HHsearch alignment for GI: 254780684 and conserved domain: PRK07261
>PRK07261 topology modulation protein; Provisional.
Probab=95.03 E-value=0.059 Score=33.24 Aligned_cols=49 Identities=22% Similarity=0.258 Sum_probs=36.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCE----EEEECCCCCHHHHHHHHHHHC
Q ss_conf 0375266788999999998740789838----993124652238899998642
Q gi|254780684|r 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV----IISLVGERGREVREFIEDYLG 211 (438)
Q Consensus 163 R~gIfg~~GvGKt~Ll~~i~~~~~~dv~----V~alIGeR~rev~efi~~~~~ 211 (438)
T Consensus 2 rI~IiG~sGsGKSTlAr~L~~~~~ip~~~LD~l~w~p~w~~~~~~e~~~~~~~ 54 (171)
T PRK07261 2 KIAIIGYSGSGKSTLARFLGQHYNCPVLHLDQLHFSSNWQERDDDDMIADISN 54 (171)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEEECCEEECCCCEECCHHHHHHHHHH
T ss_conf 89998899986899999999987979797022788899988889999999999