HHsearch alignment for GI: 254780684 and conserved domain: PRK08118
>PRK08118 topology modulation protein; Reviewed.
Probab=95.19 E-value=0.052 Score=33.61 Aligned_cols=48 Identities=19% Similarity=0.088 Sum_probs=33.3
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCCE----EEEECCCCCHHHHHHHHHH
Q ss_conf 50375266788999999998740789838----9931246522388999986
Q gi|254780684|r 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV----IISLVGERGREVREFIEDY 209 (438)
Q Consensus 162 QR~gIfg~~GvGKt~Ll~~i~~~~~~dv~----V~alIGeR~rev~efi~~~ 209 (438)
T Consensus 2 ~rI~IiG~~GsGKSTlAr~L~~~~~ip~~~LD~l~w~~~w~~~~~~e~~~~~ 53 (167)
T PRK08118 2 KKIILIGSGGSGKSTLARQLGEKLNIPVHHLDALFWKPNWEGVPKEEQRTVQ 53 (167)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCEEECCCCCCCCHHHHHHHH
T ss_conf 6799988999879999999999889697964434766899468889999999