HHsearch alignment for GI: 254780684 and conserved domain: PRK09281
>PRK09281 F0F1 ATP synthase subunit alpha; Validated.
Probab=100.00 E-value=0 Score=891.73 Aligned_cols=414 Identities=25% Similarity=0.371 Sum_probs=388.9
Q ss_pred HHHHHHHHHHCCCC-EEEEEEEEEEECCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCCCCCC
Q ss_conf 99999997413342-12012899995258999826888873518999569960799999741997999980485574678
Q gi|254780684|r 6 ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84 (438)
Q Consensus 6 ~~l~~~~~~~~~~l-~~~~G~V~~V~G~ii~v~Gl~~~v~iGelv~i~~~~~~v~geVi~~~~~~~~l~~~~~~~gI~~G 84 (438)
T Consensus 10 ~~i~~~i~~~~~~~~~~~~G~V~~v~dgia~v~GL~-~~~~~elv~f~~---g~~g~~~nle~d~vg~v~lg~~~~i~~G 85 (502)
T PRK09281 10 SIIKQQIENFDAEAEVREVGTVLSVGDGIARVYGLD-NVMAGELLEFPG---GVYGIALNLEEDSVGAVILGDYEDIKEG 85 (502)
T ss_pred HHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEECCC-CCCCCCEEEECC---CCEEEEEECCCCCEEEEEECCCCCCCCC
T ss_conf 999999982488774124469999817389995775-356488699689---9879998247882799994685556899
Q ss_pred CEEEECCC-CEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
Q ss_conf 88997288-55524666886543077630478877755530121125433300013311001112458752002235850
Q gi|254780684|r 85 DLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 (438)
Q Consensus 85 ~~V~~~g~-~~i~vG~~lLGRViD~lG~PlDg~~~l~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIr~ID~l~pig~GQR 163 (438)
T Consensus 86 ~~V~~TG~~~~VPVG~~lLGRVvd~lG~PiDGkgpi~~~-~~~pie~~aP~i~~R~~V~epL~TGIkaID~l~PiGrGQR 164 (502)
T PRK09281 86 DTVKRTGRILEVPVGEALLGRVVNPLGQPIDGKGPINAT-ETRPVERKAPGVIDRKSVHEPLQTGIKAIDAMIPIGRGQR 164 (502)
T ss_pred CEEEECCCCEEEECCHHHHCCEECCCCCCCCCCCCCCCC-CEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCE
T ss_conf 989857982577567523033206774526899988886-0313558896851357767523311355541256568756
Q ss_pred EEEECCCCCCHHHH-HHHHHHHCC-CCCEEEEECCCCCHHHHHHHHHHHCC-CCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 37526678899999-999874078-98389931246522388999986427-7553289841577880344444456777
Q gi|254780684|r 164 IGVFAGSGIGKSTL-LSMFARSDC-FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVT 240 (438)
Q Consensus 164 ~gIfg~~GvGKt~L-l~~i~~~~~-~dv~V~alIGeR~rev~efi~~~~~~-~l~~tvvv~~t~d~~~~~r~~a~~~a~~ 240 (438)
T Consensus 165 ~lIiGd~gtGKT~iaidtIinqk~~~vicVyvaIGer~seV~~~v~~L~~~gal~~TvvV~ata~dpa~lr~~Apyaa~a 244 (502)
T PRK09281 165 ELIIGDRQTGKTAIAIDTIINQKGKDVICIYVAIGQKASTVANVVRKLEEHGAMEYTIVVAATASDPAPLQYLAPYAGCA 244 (502)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 67524787338899999998532588369999851221789999998754486411379971799999999999999999
Q ss_pred HHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCC--CCCCEEEEEEEEECCC
Q ss_conf 88886426798899970989999998766540477843236632455420044444311367--8852355433342167
Q gi|254780684|r 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNITAVISVLVDGD 318 (438)
Q Consensus 241 iAEyfr~~G~~Vll~~Ds~tr~a~A~reis~~~ge~P~~~gyp~~~~~~~~~l~ERag~~~~--~~GSiT~~~~v~~~~d 318 (438)
T Consensus 245 IAEyFrd~G~dVLlv~DdLtr~A~A~REisLll~rPPgreaYPgdVFylhsrLlERa~~l~~~~ggGSiTalpivet~a~ 324 (502)
T PRK09281 245 MGEYFMDNGKDALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSLTALPIIETQAG 324 (502)
T ss_pred HHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCC
T ss_conf 99999967994899985568999999888986279987667894077786799887651478899840676766660488
Q ss_pred CCCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 64202789998612608987042775897131144564000221208999999999999999999999999985234469
Q gi|254780684|r 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 (438)
Q Consensus 319 d~~~pi~~~~~~i~DG~i~L~r~la~~g~~Paid~~~S~SR~~~~~~~~~~~~~~~~~~~~l~~y~~~~~l~~~g~y~~g 398 (438)
T Consensus 325 DvsayIptnvisItDGqI~L~~~L~~~G~~PAIdvg~SVSRVG~~aQ~k~~k~vag~lrl~laqy~el~~fa~fgs---d 401 (502)
T PRK09281 325 DVSAYIPTNVISITDGQIFLESDLFNSGIRPAINVGISVSRVGGAAQIKAMKKVAGTLRLDLAQYRELEAFAQFGS---D 401 (502)
T ss_pred CCCCCCCCCCEEEECCEEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---C
T ss_conf 6556544020234144699864276689875014455333467502449999999999999999999999997535---6
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCH
Q ss_conf 99899999999999999835998889997
Q gi|254780684|r 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 (438)
Q Consensus 399 ~d~~~d~~i~~~~~i~~fl~Q~~~e~~~~ 427 (438)
T Consensus 402 ld~~t~~~l~rg~r~~e~LkQ~~~~p~~~ 430 (502)
T PRK09281 402 LDEATRAQLERGQRLVELLKQPQYSPLPV 430 (502)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 69999999999999999867888999699