HHsearch alignment for GI: 254780684 and conserved domain: PRK10762
>PRK10762 D-ribose transporter ATP binding protein; Provisional.
Probab=93.45 E-value=0.11 Score=31.30 Aligned_cols=91 Identities=15% Similarity=0.266 Sum_probs=34.7
Q ss_pred CEEEEEECHHHHHHHHHHHHHH--CCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHH
Q ss_conf 8899970989999998766540--47784323663245542004444431136788523554333421676420278999
Q gi|254780684|r 251 NVLLILDSITRFAHSIREIATN--SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 (438)
Q Consensus 251 ~Vll~~Ds~tr~a~A~reis~~--~ge~P~~~gyp~~~~~~~~~l~ERag~~~~~~GSiT~~~~v~~~~dd~~~pi~~~~ 328 (438)
T Consensus 255 ~~~l~~~~ls~--~~l~~vs~~v~~GEi~gi~G~nGsGKsTL~~~l--~Gl~~~~~G~v------~~~G~~i~~~~~~~~ 324 (501)
T PRK10762 255 EIRLKVDNLCG--PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVL--YGALPRTSGYV------TLDGHEVVTRSPQDG 324 (501)
T ss_pred CEEEEEEECCC--CCCCCEEEEECCCCEEEEECCCCCCHHHHHHHH--HCCCCCCCCEE------EECCEECCCCCHHHH
T ss_conf 64899863146--765634447668818996678887688999998--18767777769------999998887798999
Q ss_pred HHHCCCEEEEEHHHHHCCCCCCCCC
Q ss_conf 8612608987042775897131144
Q gi|254780684|r 329 RSILDGHIVLNRSLAEEGRYPPVDP 353 (438)
Q Consensus 329 ~~i~DG~i~L~r~la~~g~~Paid~ 353 (438)
T Consensus 325 ~~--~~i~~v~~dr~~~~l~~~~sv 347 (501)
T PRK10762 325 LA--NGIVYISEDRKRDGLVLGMSV 347 (501)
T ss_pred HH--CCCCEECHHHHHCCCCCCCCH
T ss_conf 86--178445123331476678809