HHsearch alignment for GI: 254780684 and conserved domain: TIGR00067
>TIGR00067 glut_race glutamate racemase; InterPro: IPR004391 Glutamate racemase (5.1.1.3 from EC) provides the (R)-glutamic acid required for cell wall biosynthesis. It converts L-glutamate to D-glutamate during peptidoglycan biosynthesis. The most closely related proteins differing in function are aspartate racemases.; GO: 0008881 glutamate racemase activity, 0009252 peptidoglycan biosynthetic process.
Probab=90.41 E-value=1.4 Score=23.30 Aligned_cols=109 Identities=23% Similarity=0.268 Sum_probs=81.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCEEEEE------CCCCCHH-HHHH----HHHHH-CCCCCCEEEEEECCCCCHHH
Q ss_conf 03752667889999999987407898389931------2465223-8899----99864-27755328984157788034
Q gi|254780684|r 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL------VGERGRE-VREF----IEDYL-GDNLKKSVVVVATSDESPIL 230 (438)
Q Consensus 163 R~gIfg~~GvGKt~Ll~~i~~~~~~dv~V~al------IGeR~re-v~ef----i~~~~-~~~l~~tvvv~~t~d~~~~~ 230 (438)
T Consensus 2 tIgvF-DSGvGGLsV~~ei~~~lp~~~yiY~~D~~~~PYG~ks~~~i~e~v~~~~~~l~e~~~ik~lv~ACNTasa~ale 80 (262)
T TIGR00067 2 TIGVF-DSGVGGLSVLKEILKQLPKEEYIYVGDTARVPYGEKSPEKILEYVLELLEFLKESYNIKLLVVACNTASAIALE 80 (262)
T ss_pred EEEEE-ECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHH
T ss_conf 37898-76863578999999857897368861423496688855789999999999973414641556511156698899
Q ss_pred HHHHHH----------HHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf 444445----------677788886426798899970989999998766540
Q gi|254780684|r 231 RKMAPL----------TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 (438)
Q Consensus 231 r~~a~~----------~a~~iAEyfr~~G~~Vll~~Ds~tr~a~A~reis~~ 272 (438)
T Consensus 81 ~lq~~f~~PvvGVi~P~~~aa~~~~~~~~~~vlviaT~~T~~s~~~~~~~~~ 132 (262)
T TIGR00067 81 DLQRNFDFPVVGVIEPAVKAAIRLVKNKRKRVLVIATNATIKSNAYHEAVKE 132 (262)
T ss_pred HHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
T ss_conf 9987728987897666516888743401770588504467888899999986